BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012526
(461 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224129204|ref|XP_002328916.1| predicted protein [Populus trichocarpa]
gi|222839346|gb|EEE77683.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 699 bits (1803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/443 (75%), Positives = 383/443 (86%)
Query: 13 AGKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM 72
A +HYKYETI SDDIAT VYTSGTTGNPKGVMLTHKNLLHQI +L+D+VPA+ D+FLSM
Sbjct: 236 ARQHYKYETISSDDIATLVYTSGTTGNPKGVMLTHKNLLHQINNLWDVVPAQPADRFLSM 295
Query: 73 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
LPPWH YERA YFIF+ G E +YT VRNLK DLQ+YQPHY+I+VPLV+ETLYSGIQKQ+
Sbjct: 296 LPPWHAYERAAEYFIFTHGTEQVYTTVRNLKVDLQQYQPHYLITVPLVFETLYSGIQKQL 355
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
TSSA R+++A I+IS Y KRIYEG L R++K+P Y V+++DWLWARII AIL
Sbjct: 356 STSSALRKILAFMFIKISLTYMEMKRIYEGTYLVRSRKEPPYFVSMLDWLWARIIAAILL 415
Query: 193 PLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
P+H+LA+KLVY KI SAIGISKAGVSGGGSLP H+D F+EAIGV VQ GYG+TESSPV A
Sbjct: 416 PVHMLAKKLVYSKIHSAIGISKAGVSGGGSLPSHVDKFFEAIGVVVQNGYGMTESSPVTA 475
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
ARRP+ NVLGS+G PI HTE KIVDAET E LP GSKGIVKVRG QVM+GY+KNP ATKQ
Sbjct: 476 ARRPSNNVLGSIGLPIRHTEFKIVDAETGEALPHGSKGIVKVRGPQVMKGYYKNPLATKQ 535
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
A+DEDGWLN+GDIGWIAP+HSRGRSR CGGV+VLEGRAKDTIVL TGENVEPLELEEAA+
Sbjct: 536 AVDEDGWLNSGDIGWIAPYHSRGRSRHCGGVIVLEGRAKDTIVLLTGENVEPLELEEAAM 595
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELR 432
RSSLI+QIVVIGQDQRR GAI+VP+K+EVL AAK+ SIV DA+ELSK++ SLL ELR
Sbjct: 596 RSSLIQQIVVIGQDQRRLGAIVVPNKDEVLEAAKKWSIVDPDATELSKKQITSLLNEELR 655
Query: 433 KWTSKCSFQIGPIHVVDEPFTVN 455
KWTS CSFQIGPI V+DEPFT++
Sbjct: 656 KWTSGCSFQIGPILVIDEPFTID 678
>gi|296089272|emb|CBI39044.3| unnamed protein product [Vitis vinifera]
Length = 730
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/443 (75%), Positives = 380/443 (85%)
Query: 13 AGKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM 72
A K+Y YE I S+DIAT VYTSGTTGNPKGVMLTH+NLLHQI++L+DIVPAE GD+FLSM
Sbjct: 260 ARKNYIYEAISSNDIATLVYTSGTTGNPKGVMLTHQNLLHQIKNLWDIVPAEPGDRFLSM 319
Query: 73 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
LP WH YERA YFIF+ GIE +YT V NLK+DL+RYQP Y+ISVPLVYETLYSGIQKQI
Sbjct: 320 LPSWHAYERASEYFIFTHGIEQVYTTVPNLKEDLRRYQPQYLISVPLVYETLYSGIQKQI 379
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
TSS R++VA IRIS AY KRIYEG L ++QKQ SY+ ++ DWLWA+II AILW
Sbjct: 380 STSSTVRKLVALTFIRISLAYMELKRIYEGKFLQKSQKQYSYIASIFDWLWAKIIAAILW 439
Query: 193 PLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
P+H+L +KLVY KI SAIGISKAGVSGGGSLP H+D F+EAI +KVQ GYGLTE SPV A
Sbjct: 440 PVHMLGKKLVYSKIHSAIGISKAGVSGGGSLPSHVDRFFEAIDIKVQNGYGLTECSPVTA 499
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
ARRPTCNVLGSVGHPI HTEIKIVD+ET+E+LP GSKGIVKV+G VM+GY+KN ATK+
Sbjct: 500 ARRPTCNVLGSVGHPIRHTEIKIVDSETDELLPPGSKGIVKVKGPHVMKGYYKNELATKK 559
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
LDEDGWLNTGDIGWIAPHHS GRSR CGGV+VLEGRAKDTIVLSTGENVEP ELEEAA+
Sbjct: 560 VLDEDGWLNTGDIGWIAPHHSVGRSRHCGGVIVLEGRAKDTIVLSTGENVEPTELEEAAM 619
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELR 432
RS+LI+QIVVIGQDQRR GAIIVP+KEEVL AAKRLSI++A+ SELSKEK LL+ E+R
Sbjct: 620 RSTLIQQIVVIGQDQRRLGAIIVPNKEEVLAAAKRLSILNANTSELSKEKITGLLHEEIR 679
Query: 433 KWTSKCSFQIGPIHVVDEPFTVN 455
WT SFQIGPI VVDEPFT++
Sbjct: 680 TWTEGFSFQIGPILVVDEPFTID 702
>gi|225439252|ref|XP_002263501.1| PREDICTED: long-chain-fatty-acid--CoA ligase FadD15-like [Vitis
vinifera]
Length = 691
Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/443 (75%), Positives = 380/443 (85%)
Query: 13 AGKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM 72
A K+Y YE I S+DIAT VYTSGTTGNPKGVMLTH+NLLHQI++L+DIVPAE GD+FLSM
Sbjct: 221 ARKNYIYEAISSNDIATLVYTSGTTGNPKGVMLTHQNLLHQIKNLWDIVPAEPGDRFLSM 280
Query: 73 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
LP WH YERA YFIF+ GIE +YT V NLK+DL+RYQP Y+ISVPLVYETLYSGIQKQI
Sbjct: 281 LPSWHAYERASEYFIFTHGIEQVYTTVPNLKEDLRRYQPQYLISVPLVYETLYSGIQKQI 340
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
TSS R++VA IRIS AY KRIYEG L ++QKQ SY+ ++ DWLWA+II AILW
Sbjct: 341 STSSTVRKLVALTFIRISLAYMELKRIYEGKFLQKSQKQYSYIASIFDWLWAKIIAAILW 400
Query: 193 PLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
P+H+L +KLVY KI SAIGISKAGVSGGGSLP H+D F+EAI +KVQ GYGLTE SPV A
Sbjct: 401 PVHMLGKKLVYSKIHSAIGISKAGVSGGGSLPSHVDRFFEAIDIKVQNGYGLTECSPVTA 460
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
ARRPTCNVLGSVGHPI HTEIKIVD+ET+E+LP GSKGIVKV+G VM+GY+KN ATK+
Sbjct: 461 ARRPTCNVLGSVGHPIRHTEIKIVDSETDELLPPGSKGIVKVKGPHVMKGYYKNELATKK 520
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
LDEDGWLNTGDIGWIAPHHS GRSR CGGV+VLEGRAKDTIVLSTGENVEP ELEEAA+
Sbjct: 521 VLDEDGWLNTGDIGWIAPHHSVGRSRHCGGVIVLEGRAKDTIVLSTGENVEPTELEEAAM 580
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELR 432
RS+LI+QIVVIGQDQRR GAIIVP+KEEVL AAKRLSI++A+ SELSKEK LL+ E+R
Sbjct: 581 RSTLIQQIVVIGQDQRRLGAIIVPNKEEVLAAAKRLSILNANTSELSKEKITGLLHEEIR 640
Query: 433 KWTSKCSFQIGPIHVVDEPFTVN 455
WT SFQIGPI VVDEPFT++
Sbjct: 641 TWTEGFSFQIGPILVVDEPFTID 663
>gi|356512427|ref|XP_003524920.1| PREDICTED: putative acyl-CoA synthetase YngI-like [Glycine max]
Length = 733
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/443 (73%), Positives = 379/443 (85%)
Query: 13 AGKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM 72
AG+ Y YE I +D IAT VYTSGTTGNPKGVMLTH+NLLHQI++L+DIVPAE GD+FLSM
Sbjct: 263 AGQRYIYEAINTDSIATLVYTSGTTGNPKGVMLTHRNLLHQIKNLWDIVPAEAGDRFLSM 322
Query: 73 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
LPPWH YERAC YFIF+ GIE +YT VRNLKDDLQRYQP Y+ISVPLV+ETLYSGI KQI
Sbjct: 323 LPPWHAYERACEYFIFTCGIEQVYTTVRNLKDDLQRYQPQYLISVPLVFETLYSGIMKQI 382
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
T S R++VA IR S AY +KRIYEG CLT+N+KQ SY +++DWLWAR I IL
Sbjct: 383 STGSVVRKLVALTFIRSSIAYMEYKRIYEGKCLTKNKKQASYAYSMLDWLWARTIATILL 442
Query: 193 PLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
PLH+LA+KLVY KI SAIGISKAG+SGGGSLP +D F+EAIGVKVQ GYGLTE+SPVIA
Sbjct: 443 PLHILAKKLVYSKIHSAIGISKAGISGGGSLPWEVDKFFEAIGVKVQNGYGLTETSPVIA 502
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
ARRP CNV+GSVGHPI HTE KIVD+ET+EVLP GSKGI+KVRG QVM+GYFKN AT Q
Sbjct: 503 ARRPRCNVIGSVGHPIRHTEFKIVDSETDEVLPPGSKGILKVRGPQVMEGYFKNSLATNQ 562
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
ALD DGWLNTGDIGWI PHHS GRSR GV+V+EGRAKDTIVLSTGENVEPLELEEAA+
Sbjct: 563 ALDGDGWLNTGDIGWIVPHHSTGRSRNSSGVIVVEGRAKDTIVLSTGENVEPLELEEAAM 622
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELR 432
RSS+I+QIVV+GQD+RR GA+IVP+KEEVL A++LSI+ +++S++S+EK SL+Y EL+
Sbjct: 623 RSSIIQQIVVVGQDKRRLGAVIVPNKEEVLKVARKLSIIDSNSSDVSEEKVTSLIYKELK 682
Query: 433 KWTSKCSFQIGPIHVVDEPFTVN 455
WTS+ FQIGPI +V+EPFT++
Sbjct: 683 TWTSESPFQIGPILLVNEPFTID 705
>gi|22331297|ref|NP_189021.2| AMP-dependent synthetase and ligase family protein [Arabidopsis
thaliana]
gi|75311239|sp|Q9LK39.1|AAE16_ARATH RecName: Full=Probable acyl-activating enzyme 16, chloroplastic;
Flags: Precursor
gi|9293952|dbj|BAB01855.1| long-chain-fatty-acid CoA ligase [Arabidopsis thaliana]
gi|332643293|gb|AEE76814.1| AMP-dependent synthetase and ligase family protein [Arabidopsis
thaliana]
Length = 722
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/440 (71%), Positives = 376/440 (85%), Gaps = 1/440 (0%)
Query: 17 YKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPW 76
Y+YE I DDIAT +YTSGTTGNPKGVMLTH+NLLHQIR+L D VPAE G++FLSMLP W
Sbjct: 255 YEYEYIDPDDIATIMYTSGTTGNPKGVMLTHQNLLHQIRNLSDFVPAEAGERFLSMLPSW 314
Query: 77 HVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
H YERAC YFIF+ G+E YT++R LKDDL+RYQPHY+ISVPLVYETLYSGIQKQI SS
Sbjct: 315 HAYERACEYFIFTCGVEQKYTSIRFLKDDLKRYQPHYLISVPLVYETLYSGIQKQISASS 374
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
AR+ +A LI++S AYT KR+YEG CLT+NQK P Y+V+L+DWLWAR++ LWPLH+
Sbjct: 375 PARKFLALTLIKVSLAYTEMKRVYEGLCLTKNQKPPMYIVSLVDWLWARVVAFFLWPLHM 434
Query: 197 LAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 256
LAEKLV++KI+S+IGI+KAGVSGGGSLPMH+D F+EAIGV VQ GYGLTE+SPV++ARR
Sbjct: 435 LAEKLVHRKIRSSIGITKAGVSGGGSLPMHVDKFFEAIGVNVQNGYGLTETSPVVSARRL 494
Query: 257 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 316
CNVLGSVGHPI TE KIVD ET VLP GSKGIVKVRG VM+GY+KNP ATKQ +D+
Sbjct: 495 RCNVLGSVGHPIKDTEFKIVDHETGTVLPPGSKGIVKVRGPPVMKGYYKNPLATKQVIDD 554
Query: 317 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 376
DGW NTGD+GWI P HS GRSR CGGV+VLEGRAKDTIVLSTGENVEPLE+EEAA+RS+L
Sbjct: 555 DGWFNTGDMGWITPQHSTGRSRSCGGVIVLEGRAKDTIVLSTGENVEPLEIEEAAMRSNL 614
Query: 377 IRQIVVIGQDQRRPGAIIVPDKEEVLMAAK-RLSIVHADASELSKEKTISLLYGELRKWT 435
I+QIVVIGQDQRR GAI++P+KE AAK ++S V ++ +ELSKE S++Y ELRKWT
Sbjct: 615 IQQIVVIGQDQRRLGAIVIPNKEAAEGAAKQKISPVDSEVNELSKETITSMVYEELRKWT 674
Query: 436 SKCSFQIGPIHVVDEPFTVN 455
S+CSFQ+GP+ +VDEPFT++
Sbjct: 675 SQCSFQVGPVLIVDEPFTID 694
>gi|224055821|ref|XP_002298670.1| predicted protein [Populus trichocarpa]
gi|222845928|gb|EEE83475.1| predicted protein [Populus trichocarpa]
Length = 694
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/443 (73%), Positives = 379/443 (85%)
Query: 13 AGKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM 72
A +HYKYETI SDDIAT VYTSGTTGNPKGVMLTHKNLLHQI + ++IVPA+ D+FLSM
Sbjct: 224 ARQHYKYETISSDDIATLVYTSGTTGNPKGVMLTHKNLLHQINNFWEIVPAQPADRFLSM 283
Query: 73 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
LPPWH YERAC YFIF+ G E +YT VRN K DLQ+YQPHY+ISVPLV+ETLYSGIQKQI
Sbjct: 284 LPPWHAYERACEYFIFANGAEQVYTTVRNFKVDLQQYQPHYLISVPLVFETLYSGIQKQI 343
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
SS R+++A I+IS AY KRIYEG LTR+Q + SY V+++ WL ARI AIL
Sbjct: 344 SKSSTLRKLLAFTFIKISLAYMEMKRIYEGTYLTRSQNEQSYFVSILGWLRARIFAAILL 403
Query: 193 PLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
P+H+LAEKLVY KIQSAIGI KAGVSGGGSLP H+D F+EAIGV + GYG+TESSPV+A
Sbjct: 404 PVHMLAEKLVYSKIQSAIGIRKAGVSGGGSLPAHVDKFFEAIGVVLLNGYGMTESSPVLA 463
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
AR+ + NVLGSVGHPI HTE KIVDAET + LP GSKGIV+VRG QVM+GY+KNP ATKQ
Sbjct: 464 ARQLSNNVLGSVGHPIRHTEFKIVDAETGKSLPYGSKGIVRVRGPQVMKGYYKNPLATKQ 523
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
A+DEDGWLNTGD+GWIAP+HSRG+S RCGG++VLEGRAKDTIVLSTGENVEPLELEEAA+
Sbjct: 524 AVDEDGWLNTGDLGWIAPYHSRGKSCRCGGIIVLEGRAKDTIVLSTGENVEPLELEEAAM 583
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELR 432
+SSLI+QIVVIGQDQRR GAI+VP+KEEVL AK+LSIV ADA+ELSK++ +LL ELR
Sbjct: 584 KSSLIQQIVVIGQDQRRLGAIVVPNKEEVLEVAKKLSIVDADATELSKKQIANLLDKELR 643
Query: 433 KWTSKCSFQIGPIHVVDEPFTVN 455
KWTS+ SFQIGP+ V+DE FT++
Sbjct: 644 KWTSEASFQIGPVLVIDESFTID 666
>gi|20799733|gb|AAM28629.1|AF503771_1 acyl-CoA synthetase-like protein [Arabidopsis thaliana]
Length = 722
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/440 (71%), Positives = 376/440 (85%), Gaps = 1/440 (0%)
Query: 17 YKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPW 76
Y+YE I DDIAT +YTSGTTGNPKGVMLTH+NLLHQIR+L D VPAE G++FLSMLP W
Sbjct: 255 YEYEYIDPDDIATIMYTSGTTGNPKGVMLTHQNLLHQIRNLSDFVPAEAGERFLSMLPSW 314
Query: 77 HVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
H YERAC YFIF+ G+E YT++R LKDDL+RYQPHY+ISVPLVYETLYSGIQKQI SS
Sbjct: 315 HAYERACEYFIFTCGVEQKYTSIRFLKDDLKRYQPHYLISVPLVYETLYSGIQKQISASS 374
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
AR+ +A LI++S AYT KR+YEG CLT+NQK P Y+V+L+DWLWAR++ LWPLH+
Sbjct: 375 PARKFLALTLIKVSLAYTEMKRVYEGLCLTKNQKPPMYIVSLVDWLWARVVAFFLWPLHM 434
Query: 197 LAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 256
LAEKLV++KI+S+IGI+KAGVSGGGSLPMH+D F+EAIGV VQ GYGLTE+SPV++ARR
Sbjct: 435 LAEKLVHRKIRSSIGITKAGVSGGGSLPMHVDKFFEAIGVNVQNGYGLTETSPVVSARRL 494
Query: 257 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 316
CNVLGSVGHPI TE KIVD ET VLP GSKGIVKVRG VM+GY+KNP ATKQ +D+
Sbjct: 495 RCNVLGSVGHPIKDTEFKIVDHETGTVLPPGSKGIVKVRGPPVMKGYYKNPLATKQVIDD 554
Query: 317 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 376
DGW NTGD+GWI P HS GRSR CGGV+VLEGRAKDTIVLSTGENVEPLE+EEAA+RS+L
Sbjct: 555 DGWFNTGDMGWITPQHSTGRSRSCGGVIVLEGRAKDTIVLSTGENVEPLEIEEAAMRSNL 614
Query: 377 IRQIVVIGQDQRRPGAIIVPDKEEVLMAAK-RLSIVHADASELSKEKTISLLYGELRKWT 435
I+QIVVIGQDQRR GAI++P+KE AAK ++S V ++ +ELSKE S++Y ELRKWT
Sbjct: 615 IQQIVVIGQDQRRLGAIVIPNKEAAEGAAKQKISPVDSEVNELSKETITSMVYEELRKWT 674
Query: 436 SKCSFQIGPIHVVDEPFTVN 455
S+CSFQ+GP+ +VDEPFT++
Sbjct: 675 SQCSFQVGPVLIVDEPFTID 694
>gi|297835432|ref|XP_002885598.1| hypothetical protein ARALYDRAFT_898924 [Arabidopsis lyrata subsp.
lyrata]
gi|297331438|gb|EFH61857.1| hypothetical protein ARALYDRAFT_898924 [Arabidopsis lyrata subsp.
lyrata]
Length = 722
Score = 673 bits (1737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/444 (71%), Positives = 378/444 (85%), Gaps = 2/444 (0%)
Query: 13 AGKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM 72
AGK Y+YE I DDIAT +YTSGTTGNPKGVMLTH+NLLHQIR+L D VPAE G++FLSM
Sbjct: 252 AGK-YEYEFIDPDDIATIMYTSGTTGNPKGVMLTHQNLLHQIRNLSDFVPAEAGERFLSM 310
Query: 73 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
LP WH YERAC YFIF+ G+E YT++R LK DL++YQPHY+ISVPLVYETLYSGIQKQI
Sbjct: 311 LPSWHAYERACEYFIFTCGVEQKYTSIRFLKGDLKQYQPHYLISVPLVYETLYSGIQKQI 370
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
TSS R+ +A LI++S AYT KRIYEG CLT+NQK P Y+V+L+DWLWAR++ +LW
Sbjct: 371 STSSPVRKFLALTLIKVSLAYTEMKRIYEGLCLTKNQKPPLYIVSLVDWLWARVVAFVLW 430
Query: 193 PLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
PLH+LAEKLV+KKI+S+IGI+KAGVSGGGSLPMH+D F+EAI V VQ GYGLTE+SPV++
Sbjct: 431 PLHILAEKLVHKKIRSSIGITKAGVSGGGSLPMHVDKFFEAISVNVQNGYGLTETSPVVS 490
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
ARR CNVLGSVGHPI TE KIVD ET VLP GSKGIVKVRG VM+GY+KNP ATKQ
Sbjct: 491 ARRLRCNVLGSVGHPIKDTEFKIVDHETGTVLPPGSKGIVKVRGPPVMKGYYKNPLATKQ 550
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
+D+DGW NTGD+GWI P HS GRSR CGGV+VLEGRAKDTIVLSTGENVEPLE+EEAA+
Sbjct: 551 VIDDDGWFNTGDMGWITPQHSTGRSRSCGGVIVLEGRAKDTIVLSTGENVEPLEIEEAAM 610
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK-RLSIVHADASELSKEKTISLLYGEL 431
RS+LI+QIVVIGQDQRR GAI++P+KE AAK ++S V + +ELSKE+ S++Y EL
Sbjct: 611 RSNLIQQIVVIGQDQRRLGAIVIPNKEAAEGAAKQKISPVDPEVNELSKERITSMVYEEL 670
Query: 432 RKWTSKCSFQIGPIHVVDEPFTVN 455
+KWTS+CSFQ+GP+ +VDEPFT++
Sbjct: 671 KKWTSQCSFQVGPVLIVDEPFTID 694
>gi|449527657|ref|XP_004170826.1| PREDICTED: probable acyl-activating enzyme 16, chloroplastic-like,
partial [Cucumis sativus]
Length = 672
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/443 (69%), Positives = 374/443 (84%)
Query: 13 AGKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM 72
A + Y YE I SDDIAT VYTSGTTGNPKGVMLTH+NLLHQI++L+DIVPA+ GDKFLSM
Sbjct: 202 AKQCYTYEPINSDDIATLVYTSGTTGNPKGVMLTHRNLLHQIKNLWDIVPAKVGDKFLSM 261
Query: 73 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
LPPWH YERAC YFIF+ G+E YT +RNLKDDL+ YQP Y+ISVPLVYETLYSGIQKQI
Sbjct: 262 LPPWHAYERACEYFIFTFGVEQAYTTIRNLKDDLRHYQPDYLISVPLVYETLYSGIQKQI 321
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
SS R+++ A I +S AY KRIYEG LTR+ QP++LV+ +DWL+AR+ +ILW
Sbjct: 322 LASSNLRKLIVLAFINVSLAYMELKRIYEGTYLTRSNVQPTHLVSALDWLFARMTASILW 381
Query: 193 PLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
P+H+LA+ +VY K+QSAIGI KAG+SGGGSLP H+DLF+EAIG+ VQ GYGLTE SPV+A
Sbjct: 382 PIHMLAKIIVYSKVQSAIGIWKAGISGGGSLPSHVDLFFEAIGITVQNGYGLTECSPVVA 441
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
ARRPTCNVLGSVGHPI HTE +IVD ET + LP GS+GIV+VRG QVM+GY+KN SAT+Q
Sbjct: 442 ARRPTCNVLGSVGHPIRHTEFRIVDMETGDALPPGSRGIVEVRGPQVMKGYYKNSSATQQ 501
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
LD++GW ++GDIGWIAPHHSRGRSRRCGGV+VL+GRAKDTIVL TGENVEP +EEAA+
Sbjct: 502 VLDKEGWFSSGDIGWIAPHHSRGRSRRCGGVIVLDGRAKDTIVLLTGENVEPTVIEEAAM 561
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELR 432
RS+LI+QIVVIGQDQRR GAI+ P+KEEVL AAK+LS + S++S E +L+Y E+R
Sbjct: 562 RSTLIQQIVVIGQDQRRLGAIVFPNKEEVLSAAKKLSAEDSSTSDVSNETLTNLIYSEVR 621
Query: 433 KWTSKCSFQIGPIHVVDEPFTVN 455
KWTS+C FQIGPI +V+EPFT++
Sbjct: 622 KWTSECPFQIGPILIVNEPFTID 644
>gi|449441378|ref|XP_004138459.1| PREDICTED: probable acyl-activating enzyme 16, chloroplastic-like
[Cucumis sativus]
Length = 731
Score = 668 bits (1724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/443 (69%), Positives = 374/443 (84%)
Query: 13 AGKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM 72
A + Y YE I SDDIAT VYTSGTTGNPKGVMLTH+NLLHQI++L+DIVPA+ GDKFLSM
Sbjct: 261 AKQCYTYEPINSDDIATLVYTSGTTGNPKGVMLTHRNLLHQIKNLWDIVPAKVGDKFLSM 320
Query: 73 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
LPPWH YERAC YFIF+ G+E YT +RNLKDDL+ YQP Y+ISVPLVYETLYSGIQKQI
Sbjct: 321 LPPWHAYERACEYFIFTFGVEQAYTTIRNLKDDLRHYQPDYLISVPLVYETLYSGIQKQI 380
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
SS R+++ A I +S AY KRIYEG LTR+ QP++LV+ +DWL+AR+ +ILW
Sbjct: 381 LASSNLRKLIVLAFINVSLAYMELKRIYEGTYLTRSNVQPTHLVSALDWLFARMTASILW 440
Query: 193 PLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
P+H+LA+ +VY K+QSAIGI KAG+SGGGSLP H+DLF+EAIG+ VQ GYGLTE SPV+A
Sbjct: 441 PIHMLAKIIVYSKVQSAIGIWKAGISGGGSLPSHVDLFFEAIGITVQNGYGLTECSPVVA 500
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
ARRPTCNVLGSVGHPI HTE +IVD ET + LP GS+GIV+VRG QVM+GY+KN SAT+Q
Sbjct: 501 ARRPTCNVLGSVGHPIRHTEFRIVDMETGDALPPGSRGIVEVRGPQVMKGYYKNSSATQQ 560
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
LD++GW ++GDIGWIAPHHSRGRSRRCGGV+VL+GRAKDTIVL TGENVEP +EEAA+
Sbjct: 561 VLDKEGWFSSGDIGWIAPHHSRGRSRRCGGVIVLDGRAKDTIVLLTGENVEPTVIEEAAM 620
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELR 432
RS+LI+QIVVIGQDQRR GAI+ P+KEEVL AAK+LS + S++S E +L+Y E+R
Sbjct: 621 RSTLIQQIVVIGQDQRRLGAIVFPNKEEVLSAAKKLSAEDSSTSDVSNETLTNLIYSEVR 680
Query: 433 KWTSKCSFQIGPIHVVDEPFTVN 455
KWTS+C FQIGPI +V+EPFT++
Sbjct: 681 KWTSECPFQIGPILIVNEPFTID 703
>gi|357462833|ref|XP_003601698.1| Annotation was added to scaffolds in November
2011~Long-chain-fatty-acid CoA ligase [Medicago
truncatula]
gi|355490746|gb|AES71949.1| Annotation was added to scaffolds in November
2011~Long-chain-fatty-acid CoA ligase [Medicago
truncatula]
Length = 512
Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/446 (70%), Positives = 375/446 (84%), Gaps = 1/446 (0%)
Query: 11 VIAGKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKF 69
VIAG+HY +ETI DDIAT VYTSGTTGNPKGVMLTH+NLLHQI+ L D+VP E GDKF
Sbjct: 39 VIAGEHYIFETIKLDDIATLVYTSGTTGNPKGVMLTHQNLLHQIKHLSDVVPTTEAGDKF 98
Query: 70 LSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQ 129
LSMLPPWH YERAC Y +FSRG+E +YT VRNLKDDL RY+PH M+SVPLV+ETLYSGI
Sbjct: 99 LSMLPPWHAYERACEYLVFSRGLEHIYTTVRNLKDDLGRYKPHLMVSVPLVFETLYSGIM 158
Query: 130 KQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICA 189
KQI TSS R++VA IR+S Y KRIYEG CLT+NQK PSYL A++DWLWARI+
Sbjct: 159 KQISTSSLVRKLVALTFIRVSLGYMECKRIYEGKCLTKNQKAPSYLYAMLDWLWARIMAT 218
Query: 190 ILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
IL+P+H+LA KLVY KI+S IGIS A +SGGGSLP H+D F+EAIG+ +Q GYGLTE+SP
Sbjct: 219 ILYPVHMLANKLVYSKIRSTIGISTAAISGGGSLPSHVDKFFEAIGLNLQNGYGLTETSP 278
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
VIAARR C+V+GSVG+P+ HTE K+VD+ET EVLP GSKGI+KVRG Q+M+GY+KNP A
Sbjct: 279 VIAARRLGCDVIGSVGYPLKHTEFKVVDSETGEVLPPGSKGILKVRGPQLMKGYYKNPLA 338
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T + +D DGWLNTGDIGWIA HHS GRSR GGV+V+EGRAKDTIVLS+GENVEP ELEE
Sbjct: 339 TNRVIDSDGWLNTGDIGWIAAHHSTGRSRNSGGVIVVEGRAKDTIVLSSGENVEPGELEE 398
Query: 370 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYG 429
AA RS+LI+QIVVIGQD+RR GAIIVP+KEEVL AAK LSI+ +++S++S+EK SL+Y
Sbjct: 399 AATRSNLIQQIVVIGQDKRRLGAIIVPNKEEVLKAAKELSIIDSNSSDVSQEKVTSLIYN 458
Query: 430 ELRKWTSKCSFQIGPIHVVDEPFTVN 455
ELR WTS FQIGPI +V++PFT++
Sbjct: 459 ELRTWTSGFPFQIGPILLVNDPFTID 484
>gi|357462831|ref|XP_003601697.1| Annotation was added to scaffolds in November
2011~Long-chain-fatty-acid CoA ligase [Medicago
truncatula]
gi|355490745|gb|AES71948.1| Annotation was added to scaffolds in November
2011~Long-chain-fatty-acid CoA ligase [Medicago
truncatula]
Length = 720
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/444 (70%), Positives = 372/444 (83%), Gaps = 1/444 (0%)
Query: 13 AGKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLS 71
A +HY +ETI DDIAT VYTSGTTGNPKGVMLTH+NLLHQI+ L D+VP E GDKFLS
Sbjct: 249 AREHYIFETIKLDDIATLVYTSGTTGNPKGVMLTHQNLLHQIKHLSDVVPTTEAGDKFLS 308
Query: 72 MLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
MLPPWH YERAC Y +FSRG+E +YT VRNLKDDL RY+PH M+SVPLV+ETLYSGI KQ
Sbjct: 309 MLPPWHAYERACEYLVFSRGLEHIYTTVRNLKDDLGRYKPHLMVSVPLVFETLYSGIMKQ 368
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
I TSS R++VA IR+S Y KRIYEG CLT+NQK PSYL A++DWLWARI+ IL
Sbjct: 369 ISTSSLVRKLVALTFIRVSLGYMECKRIYEGKCLTKNQKAPSYLYAMLDWLWARIMATIL 428
Query: 192 WPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
+P+H+LA KLVY KI+S IGIS A +SGGGSLP H+D F+EAIG+ +Q GYGLTE+SPVI
Sbjct: 429 YPVHMLANKLVYSKIRSTIGISTAAISGGGSLPSHVDKFFEAIGLNLQNGYGLTETSPVI 488
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 311
AARR C+V+GSVG+P+ HTE K+VD+ET EVLP GSKGI+KVRG Q+M+GY+KNP AT
Sbjct: 489 AARRLGCDVIGSVGYPLKHTEFKVVDSETGEVLPPGSKGILKVRGPQLMKGYYKNPLATN 548
Query: 312 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 371
+ +D DGWLNTGDIGWIA HHS GRSR GGV+V+EGRAKDTIVLS+GENVEP ELEEAA
Sbjct: 549 RVIDSDGWLNTGDIGWIAAHHSTGRSRNSGGVIVVEGRAKDTIVLSSGENVEPGELEEAA 608
Query: 372 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGEL 431
RS+LI+QIVVIGQD+RR GAIIVP+KEEVL AAK LSI+ +++S++S+EK SL+Y EL
Sbjct: 609 TRSNLIQQIVVIGQDKRRLGAIIVPNKEEVLKAAKELSIIDSNSSDVSQEKVTSLIYNEL 668
Query: 432 RKWTSKCSFQIGPIHVVDEPFTVN 455
R WTS FQIGPI +V++PFT++
Sbjct: 669 RTWTSGFPFQIGPILLVNDPFTID 692
>gi|1617272|emb|CAA96521.1| AMP-binding protein [Brassica napus]
Length = 701
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/443 (69%), Positives = 371/443 (83%), Gaps = 7/443 (1%)
Query: 13 AGKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM 72
AG + ++I DD A +YTSGTTGNPKGVMLTH+NLLHQI+ L VPAE GD+FLSM
Sbjct: 238 AGSNDTRKSINPDDTAAIMYTSGTTGNPKGVMLTHRNLLHQIKHLSAYVPAEAGDRFLSM 297
Query: 73 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
LP WH YERAC YFIF+ G+E MYT++R LK+DL+RYQPHY+ISVPLVYETLYSGIQKQI
Sbjct: 298 LPSWHAYERACEYFIFTCGVEQMYTSIRFLKEDLKRYQPHYLISVPLVYETLYSGIQKQI 357
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
TSSAAR+ +A LI+IS AY KRIYEG CLT+ QK P Y+V+L+DWL AR++ A+LW
Sbjct: 358 STSSAARKYLALTLIKISLAYMEMKRIYEGMCLTKEQKPPMYIVSLVDWLRARVVAALLW 417
Query: 193 PLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
PLH+LA+ L+YKKI ++IGISKAG+SGGGSLP+HID F+EAIGV +Q GYGLTE+SPVI
Sbjct: 418 PLHMLAKILIYKKIHASIGISKAGISGGGSLPIHIDKFFEAIGVILQNGYGLTETSPVIC 477
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
AR +CNV+GS G+P++ TE KIVD ETN VLP GSKGIVKVRG Q+M+GY+KNP+ TKQ
Sbjct: 478 ARTLSCNVIGSAGYPMHGTEFKIVDPETNTVLPPGSKGIVKVRGPQIMKGYYKNPTTTKQ 537
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
L+E GW NTGD+GWIAPHHS GRSRRCGG++VLEGRAKDTIVLSTGENVEPLE+EEAA+
Sbjct: 538 VLNESGWFNTGDMGWIAPHHSTGRSRRCGGLIVLEGRAKDTIVLSTGENVEPLEIEEAAM 597
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELR 432
RS LI QIVVIGQDQRR GAII+P+KEE A++L + S+LS EK SL+Y ELR
Sbjct: 598 RSRLIDQIVVIGQDQRRLGAIIMPNKEE----AEKLD---PETSQLSSEKLKSLVYQELR 650
Query: 433 KWTSKCSFQIGPIHVVDEPFTVN 455
KWTS+CSFQ+GP+ +VDEPFT++
Sbjct: 651 KWTSECSFQVGPVLIVDEPFTID 673
>gi|2244763|emb|CAB10186.1| AMP-binding protein [Arabidopsis thaliana]
gi|7268112|emb|CAB78449.1| AMP-binding protein [Arabidopsis thaliana]
Length = 698
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/441 (69%), Positives = 365/441 (82%), Gaps = 10/441 (2%)
Query: 15 KHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLP 74
+ Y+ + I SDD A +YTSGTTGNPKGVMLTH+NLLHQI+ L VPA+ GDKFLSMLP
Sbjct: 240 RSYRNQFIDSDDTAAIMYTSGTTGNPKGVMLTHRNLLHQIKHLSKYVPAQAGDKFLSMLP 299
Query: 75 PWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 134
WH YERA YFIF+ G+E MYT++R LKDDL+RYQP+Y++SVPLVYETLYSGIQKQI
Sbjct: 300 SWHAYERASEYFIFTCGVEQMYTSIRYLKDDLKRYQPNYIVSVPLVYETLYSGIQKQISA 359
Query: 135 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 194
SSA R+ +A LI++S AY KRIYEG CLT+ QK P Y+VA +DWLWAR+I A+LWPL
Sbjct: 360 SSAGRKFLALTLIKVSMAYMEMKRIYEGMCLTKEQKPPMYIVAFVDWLWARVIAALLWPL 419
Query: 195 HLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
H+LA+KL+YKKI S+IGISKAG+SGGGSLP+H+D F+EAIGV +Q GYGLTE+SPV+ AR
Sbjct: 420 HMLAKKLIYKKIHSSIGISKAGISGGGSLPIHVDKFFEAIGVILQNGYGLTETSPVVCAR 479
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
+CNVLGS GHP++ TE KIVD ETN VLP GSKGI+KVRG QVM+GY+KNPS TKQ L
Sbjct: 480 TLSCNVLGSAGHPMHGTEFKIVDPETNNVLPPGSKGIIKVRGPQVMKGYYKNPSTTKQVL 539
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
+E GW NTGD GWIAPHHS+GRSR CGGV+VLEGRAKDTIVLSTGENVEPLE+EEAA+RS
Sbjct: 540 NESGWFNTGDTGWIAPHHSKGRSRHCGGVIVLEGRAKDTIVLSTGENVEPLEIEEAAMRS 599
Query: 375 SLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW 434
+I QIVVIGQD+RR GAII+P+KEE A+R+ E SKE SL+Y ELRKW
Sbjct: 600 RVIEQIVVIGQDRRRLGAIIIPNKEE----AQRVD------PETSKETLKSLVYQELRKW 649
Query: 435 TSKCSFQIGPIHVVDEPFTVN 455
TS+CSFQ+GP+ +VD+PFT++
Sbjct: 650 TSECSFQVGPVLIVDDPFTID 670
>gi|22328609|ref|NP_193143.2| long-chain acyl-CoA synthetase [Arabidopsis thaliana]
gi|75304726|sp|Q8W471.1|AAE15_ARATH RecName: Full=Long-chain-fatty-acid--[acyl-carrier-protein] ligase
AEE15, chloroplastic; AltName:
Full=Acyl-[acyl-carrier-protein] synthetase; AltName:
Full=Acyl-activating enzyme 15; Flags: Precursor
gi|17065456|gb|AAL32882.1| A6 anther-specific protein [Arabidopsis thaliana]
gi|34098785|gb|AAQ56775.1| At4g14070 [Arabidopsis thaliana]
gi|118420017|gb|ABK88270.1| chloroplast acyl ACP synthetase [Arabidopsis thaliana]
gi|332657967|gb|AEE83367.1| long-chain acyl-CoA synthetase [Arabidopsis thaliana]
Length = 727
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/441 (69%), Positives = 365/441 (82%), Gaps = 10/441 (2%)
Query: 15 KHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLP 74
+ Y+ + I SDD A +YTSGTTGNPKGVMLTH+NLLHQI+ L VPA+ GDKFLSMLP
Sbjct: 269 RSYRNQFIDSDDTAAIMYTSGTTGNPKGVMLTHRNLLHQIKHLSKYVPAQAGDKFLSMLP 328
Query: 75 PWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 134
WH YERA YFIF+ G+E MYT++R LKDDL+RYQP+Y++SVPLVYETLYSGIQKQI
Sbjct: 329 SWHAYERASEYFIFTCGVEQMYTSIRYLKDDLKRYQPNYIVSVPLVYETLYSGIQKQISA 388
Query: 135 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 194
SSA R+ +A LI++S AY KRIYEG CLT+ QK P Y+VA +DWLWAR+I A+LWPL
Sbjct: 389 SSAGRKFLALTLIKVSMAYMEMKRIYEGMCLTKEQKPPMYIVAFVDWLWARVIAALLWPL 448
Query: 195 HLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
H+LA+KL+YKKI S+IGISKAG+SGGGSLP+H+D F+EAIGV +Q GYGLTE+SPV+ AR
Sbjct: 449 HMLAKKLIYKKIHSSIGISKAGISGGGSLPIHVDKFFEAIGVILQNGYGLTETSPVVCAR 508
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
+CNVLGS GHP++ TE KIVD ETN VLP GSKGI+KVRG QVM+GY+KNPS TKQ L
Sbjct: 509 TLSCNVLGSAGHPMHGTEFKIVDPETNNVLPPGSKGIIKVRGPQVMKGYYKNPSTTKQVL 568
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
+E GW NTGD GWIAPHHS+GRSR CGGV+VLEGRAKDTIVLSTGENVEPLE+EEAA+RS
Sbjct: 569 NESGWFNTGDTGWIAPHHSKGRSRHCGGVIVLEGRAKDTIVLSTGENVEPLEIEEAAMRS 628
Query: 375 SLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW 434
+I QIVVIGQD+RR GAII+P+KEE A+R+ E SKE SL+Y ELRKW
Sbjct: 629 RVIEQIVVIGQDRRRLGAIIIPNKEE----AQRVD------PETSKETLKSLVYQELRKW 678
Query: 435 TSKCSFQIGPIHVVDEPFTVN 455
TS+CSFQ+GP+ +VD+PFT++
Sbjct: 679 TSECSFQVGPVLIVDDPFTID 699
>gi|297800864|ref|XP_002868316.1| acyl-activating enzyme 15 [Arabidopsis lyrata subsp. lyrata]
gi|297314152|gb|EFH44575.1| acyl-activating enzyme 15 [Arabidopsis lyrata subsp. lyrata]
Length = 727
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/441 (68%), Positives = 366/441 (82%), Gaps = 10/441 (2%)
Query: 15 KHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLP 74
+ Y+ + I SDD A +YTSGTTGNPKGVMLTH+NLLHQI+ L VPA+ GDKFLSMLP
Sbjct: 269 RSYRNQFINSDDTAAIMYTSGTTGNPKGVMLTHRNLLHQIKHLSKYVPAQAGDKFLSMLP 328
Query: 75 PWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 134
WH YERA YFIF+ G+E MYT++R LKDDL+RYQP+Y++SVPLVYETLYSG+QKQI
Sbjct: 329 SWHAYERASEYFIFTCGVEQMYTSIRYLKDDLKRYQPNYIVSVPLVYETLYSGMQKQISA 388
Query: 135 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 194
SSA R+ +A LIR+S AY KRIYEG CLT+ QK P Y+VA +DWLWAR++ A+LWPL
Sbjct: 389 SSAGRKFLALTLIRVSMAYMEMKRIYEGMCLTKEQKPPMYIVAFVDWLWARVVAALLWPL 448
Query: 195 HLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
H+LA++L+YKKI S+IGISKAG+SGGGSLP+H+D F+EAIGV +Q GYGLTE+SPV+ AR
Sbjct: 449 HMLAKRLIYKKIYSSIGISKAGISGGGSLPIHVDKFFEAIGVILQNGYGLTETSPVVCAR 508
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
+CNVLGS G+P++ TE KIVD ETN VLP GSKGI+KVRG QVM+GY+KNPS TK+ L
Sbjct: 509 TLSCNVLGSAGNPMHGTEFKIVDPETNNVLPPGSKGIIKVRGPQVMKGYYKNPSTTKKVL 568
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
+E GW NTGD GWIAPHHSRGRSRRCGGV+VLEGRAKDTIVLSTGENVEPLE+EEAA+RS
Sbjct: 569 NESGWFNTGDTGWIAPHHSRGRSRRCGGVIVLEGRAKDTIVLSTGENVEPLEIEEAAMRS 628
Query: 375 SLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW 434
LI QIVVIGQD+RR GAII+P+KEE A+R+ E SKE SL+Y EL+KW
Sbjct: 629 RLIEQIVVIGQDRRRLGAIIIPNKEE----AQRVD------PETSKETQKSLVYQELKKW 678
Query: 435 TSKCSFQIGPIHVVDEPFTVN 455
TS+CSFQ+GP+ +VDEPFT++
Sbjct: 679 TSECSFQVGPVLIVDEPFTID 699
>gi|255559194|ref|XP_002520618.1| long-chain-fatty-acid CoA ligase, putative [Ricinus communis]
gi|223540179|gb|EEF41754.1| long-chain-fatty-acid CoA ligase, putative [Ricinus communis]
Length = 627
Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/422 (73%), Positives = 358/422 (84%), Gaps = 2/422 (0%)
Query: 13 AGKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM 72
A + Y YETI SDD+AT +YTSGTTGNPKGVMLTHKNLLHQI +L D+ PAE GD+FLSM
Sbjct: 208 AWQRYVYETISSDDVATVIYTSGTTGNPKGVMLTHKNLLHQINNLLDVFPAEPGDRFLSM 267
Query: 73 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
LPPWHVYER C Y+I + G+E +YT VRNLK+DL++YQPHYM SVPLVYETL GIQKQI
Sbjct: 268 LPPWHVYERTCEYYIMTLGVEQVYTIVRNLKEDLKQYQPHYMFSVPLVYETL--GIQKQI 325
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
SS ++VA IR+S AY FKRIYEG LTR QKQPSYL++L+D LWARI+ AIL
Sbjct: 326 SRSSTIHKLVALTFIRVSLAYMEFKRIYEGTFLTRIQKQPSYLISLLDCLWARIMAAILL 385
Query: 193 PLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
P+H+LA+ L Y KI AIGISKAG+S GGSLPMH+D F+EAIGVK+Q GYG+TESSPV A
Sbjct: 386 PVHMLAKNLFYHKIHLAIGISKAGISAGGSLPMHVDKFFEAIGVKLQNGYGMTESSPVTA 445
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
RRPTCNVLGS+GHPI HTE K+VDAET+E LP GSKGIVKVRG QVM+GY+KNP ATKQ
Sbjct: 446 VRRPTCNVLGSIGHPIRHTEFKVVDAETDEALPDGSKGIVKVRGPQVMKGYYKNPWATKQ 505
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
LDE+GWLNTGDIGWIAPHHS GRSR+C GV+VLEGRAKDTIVLSTGEN+EP E+EEAA+
Sbjct: 506 VLDEEGWLNTGDIGWIAPHHSIGRSRQCSGVVVLEGRAKDTIVLSTGENIEPSEIEEAAM 565
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELR 432
RS+LI+QI+VIGQDQRR GAIIVP+KEEVL+AAK+LSI+ A+ SEL KE+ S+L ELR
Sbjct: 566 RSALIQQIIVIGQDQRRLGAIIVPNKEEVLLAAKKLSIIDANTSELKKEQMASMLDEELR 625
Query: 433 KW 434
W
Sbjct: 626 NW 627
>gi|20799731|gb|AAM28628.1|AF503770_1 acyl-CoA synthetase-like protein [Arabidopsis thaliana]
Length = 709
Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/441 (68%), Positives = 363/441 (82%), Gaps = 10/441 (2%)
Query: 15 KHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLP 74
+ Y+ + I SDD A +YTSGTTGNPKGVMLTH+NLLHQI+ L VPA GDKFLSMLP
Sbjct: 251 RSYRNQFIDSDDTAAIMYTSGTTGNPKGVMLTHRNLLHQIKHLSKYVPALAGDKFLSMLP 310
Query: 75 PWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 134
WH YERA YFIF+ G+E MYT++R LKDDL+RYQP+Y++SVPLVYETLYSGIQKQI
Sbjct: 311 SWHAYERASEYFIFTCGVEQMYTSIRYLKDDLKRYQPNYIVSVPLVYETLYSGIQKQISA 370
Query: 135 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 194
SSA R+ +A LI++S AY KRIYEG CLT+ QK P Y+VA +DWLWAR+I A+LWPL
Sbjct: 371 SSAGRKFLALTLIKVSMAYMEMKRIYEGMCLTKEQKPPMYIVAFVDWLWARVIAALLWPL 430
Query: 195 HLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
H+LA+KL+YKKI S+IGISKAG+SGGGSLP+H+D F+EAIGV +Q GYGLTE+SPV+ AR
Sbjct: 431 HMLAKKLIYKKIHSSIGISKAGISGGGSLPIHVDKFFEAIGVILQNGYGLTETSPVVCAR 490
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
+CNVLGS GHP++ TE KIVD ETN VLP GSKGI+KVRG QVM+GY+KNPS TKQ L
Sbjct: 491 TLSCNVLGSAGHPMHGTEFKIVDPETNNVLPPGSKGIIKVRGPQVMKGYYKNPSTTKQVL 550
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
+E GW NTGD GWIAPHHS+GRSR C GV+VLEGRAKDTIVLSTGENVEPLE+EEAA+RS
Sbjct: 551 NESGWFNTGDTGWIAPHHSKGRSRHCAGVIVLEGRAKDTIVLSTGENVEPLEIEEAAMRS 610
Query: 375 SLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW 434
+I QIVVIGQD+RR GAII+P+KEE A+R+ E SKE SL+Y ELRKW
Sbjct: 611 RVIEQIVVIGQDRRRLGAIIIPNKEE----AQRVD------PETSKETLKSLVYQELRKW 660
Query: 435 TSKCSFQIGPIHVVDEPFTVN 455
TS+CSFQ+GP+ +VD+PFT++
Sbjct: 661 TSECSFQVGPVLIVDDPFTID 681
>gi|357518659|ref|XP_003629618.1| Annotation was added to scaffolds in November
2011~Long-chain-fatty-acid CoA ligase [Medicago
truncatula]
gi|355523640|gb|AET04094.1| Annotation was added to scaffolds in November
2011~Long-chain-fatty-acid CoA ligase [Medicago
truncatula]
Length = 823
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/495 (64%), Positives = 377/495 (76%), Gaps = 52/495 (10%)
Query: 13 AGKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM 72
A + Y YE I SDDIAT +YTSGTTGNPKGVMLTH+NLLHQI++L+D VPAE GD+FLSM
Sbjct: 301 ASQRYVYEAINSDDIATLIYTSGTTGNPKGVMLTHRNLLHQIKNLWDTVPAEVGDRFLSM 360
Query: 73 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
LPPWH YERAC YFIF+ GIE +YT VRNLKDDL RYQPHYMISVPLV+ETLYSGIQKQI
Sbjct: 361 LPPWHAYERACEYFIFTCGIEQVYTTVRNLKDDLGRYQPHYMISVPLVFETLYSGIQKQI 420
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYE----GFCLTRNQKQPSYLVALIDWLWARIIC 188
TS R++VA IR+S AY +KRIYE G CLTRN KQPS + +++D LWARII
Sbjct: 421 STSPPVRKLVALTFIRVSLAYMEYKRIYEVTLVGKCLTRNVKQPSIVNSMLDCLWARIIA 480
Query: 189 AILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESS 248
IL+P+HLLA K VY KI SAIG+SKAG+SGGGSLP+ +D F+EAIGVKVQ GYGLTE+S
Sbjct: 481 TILFPIHLLAIKFVYSKIHSAIGLSKAGISGGGSLPLEVDKFFEAIGVKVQNGYGLTETS 540
Query: 249 PVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPS 308
PVIAARRP CNV+GSVGHP+ HTE K+VD+ET EVLP GSKGI+KVRG VM GY+KNP
Sbjct: 541 PVIAARRPRCNVIGSVGHPVQHTEFKVVDSETGEVLPPGSKGILKVRGPPVMNGYYKNPL 600
Query: 309 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 368
AT QALD+DGWLNTGD+GWIAPHHS GRSR GV+V++GRAKDTIVLSTGENVEP ELE
Sbjct: 601 ATNQALDKDGWLNTGDLGWIAPHHSTGRSRNSSGVIVVDGRAKDTIVLSTGENVEPAELE 660
Query: 369 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE-LSKEKTISLL 427
EAA+RSS+I+QIVVIGQD+RR GAIIVP+ EEVL A+ LSI+ + +S +S+EK ++L+
Sbjct: 661 EAAMRSSIIQQIVVIGQDKRRLGAIIVPNSEEVLKVARELSIIDSISSNVVSEEKVLNLI 720
Query: 428 YGELR-----------------------KWTS----------------KCS--------F 440
Y EL+ WTS CS F
Sbjct: 721 YKELKTCDRVIGTKYPPALPMSTTAMFTNWTSFLNSDLDVFAFISFFLSCSTYRMSESPF 780
Query: 441 QIGPIHVVDEPFTVN 455
QIGPI +V+EPFT++
Sbjct: 781 QIGPILLVNEPFTID 795
>gi|356538059|ref|XP_003537522.1| PREDICTED: long-chain-fatty-acid--CoA ligase FadD15-like [Glycine
max]
Length = 720
Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/441 (72%), Positives = 374/441 (84%)
Query: 15 KHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLP 74
KHY YE I SDDIAT VYTSGTTGNPKGVMLTH+NLLHQI++L DIVPAE GD+FLSMLP
Sbjct: 252 KHYMYEAIKSDDIATLVYTSGTTGNPKGVMLTHQNLLHQIKNLGDIVPAEVGDRFLSMLP 311
Query: 75 PWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 134
WH YERAC YFIFS G+E +YT VRNLK+DL YQPHY+ISVPLVYETLYSGIQKQI T
Sbjct: 312 SWHAYERACEYFIFSCGVEQVYTTVRNLKEDLGHYQPHYLISVPLVYETLYSGIQKQIST 371
Query: 135 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 194
SS R++VA IR+S Y KRIYEG CLT++QK PSYL +++DWLWAR++ IL+P+
Sbjct: 372 SSLVRKLVALTFIRVSLRYMECKRIYEGKCLTKDQKPPSYLHSILDWLWARVVATILFPV 431
Query: 195 HLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
HLLA+ LVY KI SAIGISKAGVSGGGSL H+D F+EAIGV VQ GYGLTE+SPVIAAR
Sbjct: 432 HLLAKILVYHKIHSAIGISKAGVSGGGSLSSHVDRFFEAIGVNVQNGYGLTETSPVIAAR 491
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
R + NV+GSVGHPI HTE K+VD+ET+EVLP GSKGI+KVRG Q+M+GY+KNPSAT Q L
Sbjct: 492 RLSYNVIGSVGHPIKHTEFKVVDSETDEVLPPGSKGILKVRGPQLMKGYYKNPSATNQVL 551
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
D DGWLNTGDIGWI PHHS GRSR GV+V++GRAKDTIVLSTGENVEP ELEEAA+RS
Sbjct: 552 DRDGWLNTGDIGWIVPHHSTGRSRNSSGVIVVDGRAKDTIVLSTGENVEPGELEEAAMRS 611
Query: 375 SLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW 434
SLI QIVVIGQD+RR GA+IVP+KEEVL AA+ SI+ +++S+ S+EK SL+Y ELR W
Sbjct: 612 SLIHQIVVIGQDKRRLGAVIVPNKEEVLKAARESSIIDSNSSDASQEKVTSLIYKELRTW 671
Query: 435 TSKCSFQIGPIHVVDEPFTVN 455
TS+ FQIGP+ +V++PFT++
Sbjct: 672 TSESPFQIGPVLLVNDPFTID 692
>gi|108712074|gb|ABF99869.1| AMP-binding protein, putative, expressed [Oryza sativa Japonica
Group]
Length = 545
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 304/442 (68%), Positives = 368/442 (83%), Gaps = 1/442 (0%)
Query: 14 GKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSML 73
G+ +ETI DD+AT +YTSGT+G PKGVMLTH+NLLHQI++L+D VPA GD+FLSML
Sbjct: 77 GQQVVFETITPDDVATLIYTSGTSGTPKGVMLTHRNLLHQIKNLWDFVPAVPGDRFLSML 136
Query: 74 PPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 133
PPWH YERA YFIF+ GI+ +YT V+ LK+DLQRYQP Y++SVPLVYE LYS IQ+QI
Sbjct: 137 PPWHAYERASEYFIFTYGIQQVYTTVKYLKEDLQRYQPQYIVSVPLVYEILYSSIQRQIS 196
Query: 134 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
+SS AR+ VA ALI+IS Y KRIYEG L+ N +PS++V +++WL ARI+ A+LWP
Sbjct: 197 SSSTARKFVALALIKISLLYMEAKRIYEGTVLSNNPVKPSFIVYMVNWLSARIVAALLWP 256
Query: 194 LHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 253
LH LA+ LVYKKI SAIGISKAG+SGGGSLPMH+D F+EAIGVKVQ GYGLTE+SPV+AA
Sbjct: 257 LHNLAKTLVYKKIHSAIGISKAGISGGGSLPMHVDKFFEAIGVKVQNGYGLTETSPVVAA 316
Query: 254 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 313
RRP CNVLG+VGHP+ HTEIK+VD ET EVLP GSKG+VKVRG QVM+GY+KNPSAT +
Sbjct: 317 RRPFCNVLGTVGHPVKHTEIKVVDMETGEVLPDGSKGVVKVRGPQVMKGYYKNPSATNKV 376
Query: 314 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 373
LD++GW +TGDIGWIAPH G SR+CGG+LVLEGRAKDTIVL+TGENVEP E+EEAA R
Sbjct: 377 LDQEGWFDTGDIGWIAPHCPTGPSRKCGGMLVLEGRAKDTIVLTTGENVEPAEIEEAASR 436
Query: 374 SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRK 433
S LI QIVV+GQD+RR GA+IVP+ +EVL AKR SI+ + +EL+K+K ++LLY ELR
Sbjct: 437 SDLINQIVVVGQDKRRIGALIVPNYDEVLATAKRKSILDGN-NELAKDKVLNLLYDELRT 495
Query: 434 WTSKCSFQIGPIHVVDEPFTVN 455
W CSFQIGPI +VDEPFTV+
Sbjct: 496 WMVDCSFQIGPILIVDEPFTVD 517
>gi|218194090|gb|EEC76517.1| hypothetical protein OsI_14303 [Oryza sativa Indica Group]
Length = 682
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 304/442 (68%), Positives = 368/442 (83%), Gaps = 1/442 (0%)
Query: 14 GKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSML 73
G+ +ETI DD+AT +YTSGT+G PKGVMLTH+NLLHQI++L+D VPA GD+FLSML
Sbjct: 214 GQQVVFETITPDDVATLIYTSGTSGTPKGVMLTHRNLLHQIKNLWDFVPAVPGDRFLSML 273
Query: 74 PPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 133
PPWH YERA YFIF+ GI+ +YT V+ LK+DLQRYQP Y++SVPLVYE LYS IQ+QI
Sbjct: 274 PPWHAYERASEYFIFTYGIQQVYTTVKYLKEDLQRYQPQYIVSVPLVYEILYSSIQRQIS 333
Query: 134 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
+SS AR+ VA ALI+IS Y KRIYEG L+ N +PS++V +++WL ARI+ A+LWP
Sbjct: 334 SSSTARKFVALALIKISLLYMEAKRIYEGTVLSNNPVKPSFIVYMVNWLSARIVAALLWP 393
Query: 194 LHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 253
LH LA+ LVYKKI SAIGISKAG+SGGGSLPMH+D F+EAIGVKVQ GYGLTE+SPV+AA
Sbjct: 394 LHNLAKTLVYKKIHSAIGISKAGISGGGSLPMHVDKFFEAIGVKVQNGYGLTETSPVVAA 453
Query: 254 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 313
RRP CNVLG+VGHP+ HTEIK+VD ET EVLP GSKG+VKVRG QVM+GY+KNPSAT +
Sbjct: 454 RRPFCNVLGTVGHPVKHTEIKVVDMETGEVLPDGSKGVVKVRGPQVMKGYYKNPSATNKV 513
Query: 314 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 373
LD++GW +TGDIGWIAPH G SR+CGG+LVLEGRAKDTIVL+TGENVEP E+EEAA R
Sbjct: 514 LDQEGWFDTGDIGWIAPHCPTGPSRKCGGMLVLEGRAKDTIVLTTGENVEPAEIEEAASR 573
Query: 374 SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRK 433
S LI QIVV+GQD+RR GA+IVP+ +EVL AKR SI+ ++EL+K+K ++LLY ELR
Sbjct: 574 SDLINQIVVVGQDKRRIGALIVPNYDEVLATAKRKSILDG-SNELAKDKVLNLLYDELRT 632
Query: 434 WTSKCSFQIGPIHVVDEPFTVN 455
W CSFQIGPI +VDEPFTV+
Sbjct: 633 WMVDCSFQIGPILIVDEPFTVD 654
>gi|115456555|ref|NP_001051878.1| Os03g0845500 [Oryza sativa Japonica Group]
gi|41469655|gb|AAS07378.1| putative AMP-binding protein [Oryza sativa Japonica Group]
gi|108712073|gb|ABF99868.1| AMP-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113550349|dbj|BAF13792.1| Os03g0845500 [Oryza sativa Japonica Group]
gi|222626158|gb|EEE60290.1| hypothetical protein OsJ_13349 [Oryza sativa Japonica Group]
Length = 750
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 304/442 (68%), Positives = 368/442 (83%), Gaps = 1/442 (0%)
Query: 14 GKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSML 73
G+ +ETI DD+AT +YTSGT+G PKGVMLTH+NLLHQI++L+D VPA GD+FLSML
Sbjct: 282 GQQVVFETITPDDVATLIYTSGTSGTPKGVMLTHRNLLHQIKNLWDFVPAVPGDRFLSML 341
Query: 74 PPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 133
PPWH YERA YFIF+ GI+ +YT V+ LK+DLQRYQP Y++SVPLVYE LYS IQ+QI
Sbjct: 342 PPWHAYERASEYFIFTYGIQQVYTTVKYLKEDLQRYQPQYIVSVPLVYEILYSSIQRQIS 401
Query: 134 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
+SS AR+ VA ALI+IS Y KRIYEG L+ N +PS++V +++WL ARI+ A+LWP
Sbjct: 402 SSSTARKFVALALIKISLLYMEAKRIYEGTVLSNNPVKPSFIVYMVNWLSARIVAALLWP 461
Query: 194 LHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 253
LH LA+ LVYKKI SAIGISKAG+SGGGSLPMH+D F+EAIGVKVQ GYGLTE+SPV+AA
Sbjct: 462 LHNLAKTLVYKKIHSAIGISKAGISGGGSLPMHVDKFFEAIGVKVQNGYGLTETSPVVAA 521
Query: 254 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 313
RRP CNVLG+VGHP+ HTEIK+VD ET EVLP GSKG+VKVRG QVM+GY+KNPSAT +
Sbjct: 522 RRPFCNVLGTVGHPVKHTEIKVVDMETGEVLPDGSKGVVKVRGPQVMKGYYKNPSATNKV 581
Query: 314 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 373
LD++GW +TGDIGWIAPH G SR+CGG+LVLEGRAKDTIVL+TGENVEP E+EEAA R
Sbjct: 582 LDQEGWFDTGDIGWIAPHCPTGPSRKCGGMLVLEGRAKDTIVLTTGENVEPAEIEEAASR 641
Query: 374 SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRK 433
S LI QIVV+GQD+RR GA+IVP+ +EVL AKR SI+ + +EL+K+K ++LLY ELR
Sbjct: 642 SDLINQIVVVGQDKRRIGALIVPNYDEVLATAKRKSILDGN-NELAKDKVLNLLYDELRT 700
Query: 434 WTSKCSFQIGPIHVVDEPFTVN 455
W CSFQIGPI +VDEPFTV+
Sbjct: 701 WMVDCSFQIGPILIVDEPFTVD 722
>gi|357114733|ref|XP_003559149.1| PREDICTED: long-chain-fatty-acid--CoA ligase FadD15-like
[Brachypodium distachyon]
Length = 709
Score = 623 bits (1606), Expect = e-176, Method: Compositional matrix adjust.
Identities = 302/442 (68%), Positives = 369/442 (83%), Gaps = 1/442 (0%)
Query: 14 GKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSML 73
G+ +E I +D+AT +YTSGT G PKGVMLTH+NLLHQI +L+DIVPA GD+FLSML
Sbjct: 241 GQQGVFEAITPEDVATLIYTSGTGGTPKGVMLTHRNLLHQINNLWDIVPAVPGDRFLSML 300
Query: 74 PPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 133
PPWH YER+ YFIF+ GI+ +YTAV+ LK+DLQRYQPHY+ISVPLVYETLYS IQ+QI
Sbjct: 301 PPWHAYERSTEYFIFTCGIQQVYTAVKYLKEDLQRYQPHYVISVPLVYETLYSSIQRQIS 360
Query: 134 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
+SS AR+ +A ALI+IS Y K+IYEG L+ N +PS++V +++ LWARII A+LWP
Sbjct: 361 SSSTARKTLALALIKISLQYMESKKIYEGTVLSNNPVEPSHIVCMVNCLWARIIVALLWP 420
Query: 194 LHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 253
H LA+ LVYKKI S+IGISKAG+SGGGSLPMH+D F+EAIG+KVQ GYGLTE+SPV+AA
Sbjct: 421 FHNLAKLLVYKKIHSSIGISKAGISGGGSLPMHVDKFFEAIGIKVQNGYGLTETSPVVAA 480
Query: 254 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 313
RRP CNVLG+VGHP+ HTEIK+VD ET E LP GSKGIVK++G VM+GY+KNPSAT +A
Sbjct: 481 RRPFCNVLGTVGHPVKHTEIKVVDIETGEALPDGSKGIVKIKGPPVMKGYYKNPSATNKA 540
Query: 314 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 373
LD++GW NTGDIGW+APHH+ G SR+CGG+LVLEGRAKDTIVL+TGENVEP ELEEAA R
Sbjct: 541 LDQEGWFNTGDIGWLAPHHTTGPSRKCGGMLVLEGRAKDTIVLTTGENVEPAELEEAAGR 600
Query: 374 SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRK 433
S+LI+QI+VIGQD+RR GAIIVP+ +EVL AKR S + D +EL+K ++LLY ELR
Sbjct: 601 SNLIQQIMVIGQDRRRLGAIIVPNNDEVLATAKRKSRLDGD-NELAKATILNLLYDELRA 659
Query: 434 WTSKCSFQIGPIHVVDEPFTVN 455
WT CSFQIGPI +VDEPFT++
Sbjct: 660 WTVGCSFQIGPILIVDEPFTID 681
>gi|62321026|dbj|BAD94085.1| A6 anther-specific protein [Arabidopsis thaliana]
Length = 402
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 267/384 (69%), Positives = 320/384 (83%), Gaps = 10/384 (2%)
Query: 72 MLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
MLP WH YERA YFIF+ G+E MYT++R LKDDL+RYQP+Y++SVPLVYETLYSGIQKQ
Sbjct: 1 MLPSWHAYERASEYFIFTCGVEQMYTSIRYLKDDLKRYQPNYIVSVPLVYETLYSGIQKQ 60
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
I SSA R+ +A LI++S AY KRIYEG CLT+ QK P Y+VA +DWLWAR+I A+L
Sbjct: 61 ISASSAGRKFLALTLIKVSMAYMEMKRIYEGMCLTKEQKPPMYIVAFVDWLWARVIAALL 120
Query: 192 WPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
WPLH+LA+KL+YKKI S+IGISKAG+SGGGSLP+H+D F+EAIGV +Q GYGLTE+SPV+
Sbjct: 121 WPLHMLAKKLIYKKIHSSIGISKAGISGGGSLPIHVDKFFEAIGVILQNGYGLTETSPVV 180
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 311
AR +CNVLGS GHP++ TE KIVD ETN VLP GSKGI+KVRG QVM+GY+KNPS TK
Sbjct: 181 CARTLSCNVLGSAGHPMHGTEFKIVDPETNNVLPPGSKGIIKVRGPQVMKGYYKNPSTTK 240
Query: 312 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 371
Q L+E GW NTGD GWIAPHHS+GRSR CGGV+VLEGRAKDTIVLSTGENVEPLE+EEAA
Sbjct: 241 QVLNESGWFNTGDTGWIAPHHSKGRSRHCGGVIVLEGRAKDTIVLSTGENVEPLEIEEAA 300
Query: 372 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGEL 431
+RS +I QIVVIGQD+RR GAII+P+KEE A+R+ E SKE SL+Y EL
Sbjct: 301 MRSRVIEQIVVIGQDRRRLGAIIIPNKEE----AQRVD------PETSKETLKSLVYQEL 350
Query: 432 RKWTSKCSFQIGPIHVVDEPFTVN 455
RKWTS+CSFQ+GP+ +VD+PFT++
Sbjct: 351 RKWTSECSFQVGPVLIVDDPFTID 374
>gi|302775100|ref|XP_002970967.1| hypothetical protein SELMODRAFT_95195 [Selaginella moellendorffii]
gi|300160949|gb|EFJ27565.1| hypothetical protein SELMODRAFT_95195 [Selaginella moellendorffii]
Length = 616
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 241/431 (55%), Positives = 313/431 (72%), Gaps = 19/431 (4%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 83
S D+AT VYTSGTTGNPKGVMLTH N++HQ++ L + GD+FLS+LPPWH+YER
Sbjct: 173 SFDVATIVYTSGTTGNPKGVMLTHANIIHQMKYLDQCIQPVPGDRFLSLLPPWHMYERVA 232
Query: 84 GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
YF F+RGIE +YT+V+ LKDDLQ Y Y +SVPLVY+TLYSG+QKQ+ +S RR +
Sbjct: 233 EYFTFTRGIEQVYTSVKFLKDDLQAYPTQYFVSVPLVYDTLYSGVQKQLSKASGLRRALV 292
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
+ IS + KRI EG LTR ++ P+ L + A ++ IL PLH L +K+V+
Sbjct: 293 MGFMAISSFFKDLKRISEGRSLTRAREHPNRLECFL----AGVMAMILSPLHFLGDKIVF 348
Query: 204 KKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
KI++AIGI KAG+SGGGSLP H+D F+E +G+ + GYGLTESSPV++ R + NVLG+
Sbjct: 349 SKIRAAIGIRKAGISGGGSLPKHVDKFFEVVGITLLNGYGLTESSPVVSTRAFSDNVLGT 408
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
VG P+ TE+KIVD E+ + L G+KGIV VRG QVM+GY+KNP AT++A+D DGWL+TG
Sbjct: 409 VGMPLRETEVKIVDPESRKTLANGNKGIVTVRGPQVMKGYYKNPDATQKAIDGDGWLDTG 468
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+GW+AP G +R+CGG+LVLEGRAK+TIVLSTGENVEP E+EEAAL+SSLI QI+V+
Sbjct: 469 DLGWVAPVWKTGAARKCGGMLVLEGRAKETIVLSTGENVEPTEIEEAALQSSLIDQIMVV 528
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIG 443
GQDQRR GA+IV K+ +A L SL+ EL++ TS CSFQIG
Sbjct: 529 GQDQRRLGALIVASKDTAATSANDLK---------------SLVREELQRCTSSCSFQIG 573
Query: 444 PIHVVDEPFTV 454
P +V+EPFT+
Sbjct: 574 PFVIVNEPFTM 584
>gi|302757391|ref|XP_002962119.1| hypothetical protein SELMODRAFT_76207 [Selaginella moellendorffii]
gi|300170778|gb|EFJ37379.1| hypothetical protein SELMODRAFT_76207 [Selaginella moellendorffii]
Length = 617
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 241/434 (55%), Positives = 312/434 (71%), Gaps = 19/434 (4%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I D+AT VYTSGTTGNPKGVMLTH N++HQ++ L + GD+FLS+LPPWH+YER
Sbjct: 172 IQPQDVATIVYTSGTTGNPKGVMLTHANIIHQMKYLDQCIQPVPGDRFLSLLPPWHMYER 231
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
YF F+RGIE +YT V+ LKDDLQ Y Y +SVPLVY+TLYSG+QKQ+ +S RR
Sbjct: 232 VAEYFTFTRGIEQVYTTVKFLKDDLQAYPTQYFVSVPLVYDTLYSGVQKQLSKASGLRRA 291
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
+ + IS + KRI EG LTR ++ P+ L + A ++ IL PLH L +K+
Sbjct: 292 LVMGFMAISSFFKDLKRISEGRSLTRAKEHPNRLECFL----AGVMAMILSPLHFLGDKI 347
Query: 202 VYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
V+ KI++AIGI KAG+SGGGSLP H+D F+E +G+ + GYGLTESSPV++ R + NVL
Sbjct: 348 VFSKIRAAIGIQKAGISGGGSLPKHVDKFFEVVGITLLNGYGLTESSPVVSTRAFSDNVL 407
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
G+VG P+ TE+KIVD E+ + L G+KGIV VRG QVM+GY+KNP AT++A+D DGWL+
Sbjct: 408 GTVGMPLPETEVKIVDPESRKPLANGNKGIVTVRGPQVMKGYYKNPDATQKAIDGDGWLD 467
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD+GW+AP G +R+CGG+LVLEGRAK+TIVLSTGENVEP E+EEAAL+SSLI QI+
Sbjct: 468 TGDLGWVAPVWKTGAARKCGGMLVLEGRAKETIVLSTGENVEPTEIEEAALQSSLIDQIM 527
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQ 441
V+GQDQRR GA+IV K+ +A L SL+ EL++ TS CSFQ
Sbjct: 528 VVGQDQRRLGALIVASKDTAATSANDLK---------------SLVREELQRCTSSCSFQ 572
Query: 442 IGPIHVVDEPFTVN 455
IGP +V+EPFT+
Sbjct: 573 IGPFVIVNEPFTME 586
>gi|255559188|ref|XP_002520615.1| long-chain-fatty-acid CoA ligase, putative [Ricinus communis]
gi|223540176|gb|EEF41751.1| long-chain-fatty-acid CoA ligase, putative [Ricinus communis]
Length = 571
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 220/293 (75%), Positives = 252/293 (86%)
Query: 13 AGKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM 72
A + Y YETI SDD+AT VYTSGTTGNPKGVMLTHKNLLHQI +L D+VPAE GD+FLSM
Sbjct: 272 AWRQYVYETISSDDVATLVYTSGTTGNPKGVMLTHKNLLHQINNLLDVVPAEPGDRFLSM 331
Query: 73 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
LPPWH YERAC YFI + G+E ++T VRNLK+DL+ YQPHYMISVPLVYETLYSGIQKQI
Sbjct: 332 LPPWHAYERACEYFIMTLGVEQVFTTVRNLKEDLKHYQPHYMISVPLVYETLYSGIQKQI 391
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
TSS R++VA IR+S AY FKRIYEG LTR QKQPSYL++L+D LWARI+ AIL
Sbjct: 392 STSSTIRKLVALTFIRVSLAYMEFKRIYEGTYLTRIQKQPSYLISLLDCLWARIMAAILL 451
Query: 193 PLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
P+H+LA+KLVY+KI AIGISKAG+SGGGSLPMH+D F+EAIGVKVQ GYG+TESSPV A
Sbjct: 452 PVHMLAKKLVYRKIHLAIGISKAGISGGGSLPMHVDKFFEAIGVKVQNGYGMTESSPVTA 511
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 305
ARRPTCNVLGS+GHPI HTE K+VDAET+E P GSKGIVKV+G QVM+GY+K
Sbjct: 512 ARRPTCNVLGSIGHPIRHTEFKVVDAETDEAFPDGSKGIVKVKGPQVMKGYYK 564
>gi|147784541|emb|CAN68253.1| hypothetical protein VITISV_043922 [Vitis vinifera]
Length = 929
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 231/350 (66%), Positives = 273/350 (78%), Gaps = 9/350 (2%)
Query: 108 RYQPHYMISVPLVYETLYSGI--QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 165
+Y H + + E L +G+ + T ++ + L + F G L
Sbjct: 559 KYTKHVEVDKHFIKEKLENGLIFMAYVLTVEQVVDILTKGLPKKQFDDL-------GKFL 611
Query: 166 TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPM 225
++QKQ SY+ ++ DWLWA+II AILWP+H+L +KL+Y KI SAIGISKAGVSGGGSLP
Sbjct: 612 QKSQKQYSYIASIFDWLWAKIIAAILWPVHMLGKKLIYSKIHSAIGISKAGVSGGGSLPS 671
Query: 226 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 285
H+D F+EAI +KVQ GYGLTE SPV AARRPTCNVLGSVGHPI HTEIKIVD+ET+E+LP
Sbjct: 672 HVDRFFEAIDIKVQNGYGLTECSPVTAARRPTCNVLGSVGHPIRHTEIKIVDSETDELLP 731
Query: 286 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 345
GSKGIVKV+G VM+GY+KN ATK+ LDEDGWLNTGDIGWIAPHHS GRSR CGGV+V
Sbjct: 732 PGSKGIVKVKGPHVMKGYYKNELATKKVLDEDGWLNTGDIGWIAPHHSVGRSRHCGGVIV 791
Query: 346 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 405
LEGRAKDTIVLSTGENVEP ELEEAA+RS+LI+QIVVIGQDQRR GAIIVP+KEEVL AA
Sbjct: 792 LEGRAKDTIVLSTGENVEPTELEEAAMRSTLIQQIVVIGQDQRRLGAIIVPNKEEVLAAA 851
Query: 406 KRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 455
KR SI++A+ SELSKEK LL+ E+R WT SFQIGPI VVDEPFT++
Sbjct: 852 KRXSILNANTSELSKEKITGLLHEEIRTWTEGFSFQIGPILVVDEPFTID 901
>gi|168050144|ref|XP_001777520.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671138|gb|EDQ57695.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 778
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/442 (51%), Positives = 314/442 (71%)
Query: 13 AGKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM 72
+G+ + + I DD+AT VYTSGTTGNPKGVMLTH NLLHQI L +V GD+FLS+
Sbjct: 303 SGERVQCDVIHPDDVATLVYTSGTTGNPKGVMLTHANLLHQIVHLGSVVQPGPGDRFLSL 362
Query: 73 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
LPPWH+YER+ YF SRG+ +YT+V+ LK+DL RY P Y ++VPLV++ LYSG+QKQI
Sbjct: 363 LPPWHMYERSAEYFALSRGVSQVYTSVKTLKEDLARYPPDYFVAVPLVFDILYSGVQKQI 422
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
S R+ +A L+ +S + KR EG +T+ ++ S + A W A I +L
Sbjct: 423 AAGSKFRKQIALTLLSLSLKFVDIKRKQEGRDVTKGRESFSPVAAAKVWAIATIGALLLL 482
Query: 193 PLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
P HLLA+KLVY KI ++IGI KA +SGGGSLP ++D F+EAIG++V GYGLTE+SPV++
Sbjct: 483 PFHLLAQKLVYSKILASIGIKKAAISGGGSLPPYVDRFFEAIGIRVLNGYGLTETSPVVS 542
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
R P+ NVLG+VG PI TEIK+VD + ++P G KG VK+RG QVM+GY+KNP+AT +
Sbjct: 543 CRLPSNNVLGTVGGPIPETEIKVVDPNSGNIVPPGIKGSVKIRGPQVMKGYYKNPAATSK 602
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
A+D DGW TGD+GW P G +R CGG+LVL+GRAKDTIVLSTGENVEP E+EEA +
Sbjct: 603 AIDSDGWFETGDLGWKVPSSPVGPARMCGGLLVLDGRAKDTIVLSTGENVEPQEIEEAIM 662
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELR 432
+S LI+ ++++GQD+RR GA+IV +KEE+ A K + D+S+ K +++ E+
Sbjct: 663 QSKLIQNVMLVGQDKRRLGALIVGNKEELEAAVKEYKLAKGDSSKPIKSDRTNVIRREIN 722
Query: 433 KWTSKCSFQIGPIHVVDEPFTV 454
+ + S+ +GP +++E FT+
Sbjct: 723 RLLANSSWPVGPFALIEESFTI 744
>gi|168043320|ref|XP_001774133.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674540|gb|EDQ61047.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 672
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/445 (50%), Positives = 312/445 (70%), Gaps = 5/445 (1%)
Query: 13 AGKHYK---YETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKF 69
+G +Y+ +E I SDD AT VYTSGTTG PK VMLTH NLLHQ+ +L+ ++ G +F
Sbjct: 201 SGGYYRNILHEKIHSDDTATLVYTSGTTGKPKAVMLTHGNLLHQVINLWSVIQPSPGQRF 260
Query: 70 LSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQ 129
L++LPPWH+YER+C YF SRG+ +YT+V++LK+DL Y+P Y ++VPLV++ LY+G+Q
Sbjct: 261 LTILPPWHMYERSCEYFYLSRGVNHVYTSVKSLKEDLVLYKPDYFVAVPLVFDLLYNGVQ 320
Query: 130 KQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICA 189
KQ+ ++ R+ +A ALI IS Y KR+ +G L +K+ A +WL A ++ +
Sbjct: 321 KQLNAATGFRKTLAMALISISTKYMDAKRVAQGRDLASARKKQPIFTAAKEWLAAMVVMS 380
Query: 190 ILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
IL PLHL+ + LV+KKI++ + + A +SGGGSLP H+D F+E IG+ V GYGLTE+SP
Sbjct: 381 ILLPLHLITKLLVFKKIRATLTMGTA-ISGGGSLPTHVDKFFEMIGIPVLNGYGLTETSP 439
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
V++ R P N+LGSVG PI T +KIVD ETN L G KG+VK G Q+M+GY+K A
Sbjct: 440 VLSCRLPYNNILGSVGIPIPGTRVKIVDPETNRQLGPGIKGLVKASGPQIMKGYYK-AKA 498
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
TK+A+D +GW +TGD+GWIAP G +RRCGGVL+L+GRAKDTIVLSTGENVEP E+EE
Sbjct: 499 TKKAIDPEGWFDTGDLGWIAPKMGIGCARRCGGVLILDGRAKDTIVLSTGENVEPTEIEE 558
Query: 370 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYG 429
+SSLI+ IVV+GQDQRR GA++V +K+E+ AAK + +E S + +
Sbjct: 559 VMSQSSLIQNIVVLGQDQRRLGALVVANKDELYAAAKERMQAKGNTAEPSDADLRACIRE 618
Query: 430 ELRKWTSKCSFQIGPIHVVDEPFTV 454
ELR + + CS + ++ EPFTV
Sbjct: 619 ELRTYGAGCSHSVATFEILYEPFTV 643
>gi|414873918|tpg|DAA52475.1| TPA: hypothetical protein ZEAMMB73_557217 [Zea mays]
Length = 603
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/267 (70%), Positives = 222/267 (83%), Gaps = 13/267 (4%)
Query: 201 LVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
LVYKKI SAIGISKAG+SGGGSLPMH+D F+EAIG+KVQ GYGLTE+SPV+AARRP CNV
Sbjct: 310 LVYKKIHSAIGISKAGISGGGSLPMHVDKFFEAIGIKVQNGYGLTETSPVVAARRPFCNV 369
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
LG+VGHPI HTEIKI D ET EVLP GSKGIVK++G QVM+GY+KNPSAT +A D++GW
Sbjct: 370 LGTVGHPIKHTEIKIFDIETGEVLPDGSKGIVKIKGPQVMKGYYKNPSATNEAFDQEGWF 429
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
+TGD+GWI PHH+ G SR+CGG++VLEGRAKDTIVLSTGENVEP E+EEAA RS+LI QI
Sbjct: 430 STGDVGWIVPHHAMGPSRQCGGMIVLEGRAKDTIVLSTGENVEPAEIEEAASRSTLINQI 489
Query: 381 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW------ 434
VVIGQDQRR GAIIVP+ +EVL AKR SI+ D EL+K+K +++LY ELR W
Sbjct: 490 VVIGQDQRRLGAIIVPNNDEVLAEAKRKSILGEDG-ELAKDKVMNMLYDELRTWRKCLII 548
Query: 435 ------TSKCSFQIGPIHVVDEPFTVN 455
T+ CSF++GPI VVDEPFT++
Sbjct: 549 LFTRFRTAHCSFRVGPILVVDEPFTID 575
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 74/90 (82%)
Query: 14 GKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSML 73
G+ +E+I +D+AT +YTSGT+G PKGVMLTH+NLLHQI +L++IVPAE GD+FLSML
Sbjct: 219 GQQDVFESISPEDVATLIYTSGTSGTPKGVMLTHRNLLHQINNLWEIVPAEPGDRFLSML 278
Query: 74 PPWHVYERACGYFIFSRGIELMYTAVRNLK 103
P WH YERAC YFIFS GI+ +YT V+ LK
Sbjct: 279 PTWHAYERACEYFIFSYGIQQVYTTVKYLK 308
>gi|357462837|ref|XP_003601700.1| Annotation was added to scaffolds in November
2011~Long-chain-fatty-acid CoA ligase [Medicago
truncatula]
gi|355490748|gb|AES71951.1| Annotation was added to scaffolds in November
2011~Long-chain-fatty-acid CoA ligase [Medicago
truncatula]
Length = 522
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/248 (73%), Positives = 209/248 (84%)
Query: 13 AGKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM 72
A KHY +E I SDDIAT VYTSGTTGNPKGVMLTH+NLLHQI+ DIVPAE GD+FLSM
Sbjct: 271 ARKHYVFEAIKSDDIATLVYTSGTTGNPKGVMLTHQNLLHQIKFYSDIVPAEVGDRFLSM 330
Query: 73 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
LPPWH YERAC YFIFS G++ +YT VRNLKDDL+RYQPHY+ISVPLVYE+LYSGIQ+QI
Sbjct: 331 LPPWHAYERACEYFIFSCGVDQVYTTVRNLKDDLERYQPHYLISVPLVYESLYSGIQRQI 390
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
TSS R++VA IR+S Y KRIYEG CLT+NQK PSYL A++DWL ARII IL+
Sbjct: 391 STSSLVRKLVALTFIRVSLGYMECKRIYEGKCLTKNQKSPSYLYAMLDWLGARIIATILF 450
Query: 193 PLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
P+H+LA+KLVY KI SAIG SKAG+SGGGSLP H+D F+EAIGV +Q GYGLTE+SPVIA
Sbjct: 451 PIHMLAKKLVYSKIHSAIGFSKAGISGGGSLPSHVDRFFEAIGVTLQNGYGLTETSPVIA 510
Query: 253 ARRPTCNV 260
ARR +CNV
Sbjct: 511 ARRLSCNV 518
>gi|428778235|ref|YP_007170022.1| AMP-dependent synthetase and ligase [Halothece sp. PCC 7418]
gi|428692514|gb|AFZ45808.1| AMP-dependent synthetase and ligase [Halothece sp. PCC 7418]
Length = 636
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/443 (47%), Positives = 284/443 (64%), Gaps = 29/443 (6%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+AT +YTSGTTG PKG ML+H N LHQ+R++ D++ + GD+ LS+LP WH YERA
Sbjct: 181 DDLATLIYTSGTTGKPKGAMLSHGNFLHQVRAIGDVIQPQAGDRVLSILPSWHAYERAAE 240
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
YF+ SRG L+YT +R+ K DL+ +P+YM+ VP ++E++Y GIQK + + ++ +
Sbjct: 241 YFLLSRGCHLIYTNLRSFKKDLREQKPNYMVGVPRLWESVYDGIQKNLNQQTGNKKKLID 300
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
+ IS Y KRI EG L +PS LI L A C++L PLH L +K+VY+
Sbjct: 301 FFLSISNRYLKTKRISEGLDL--ENLRPS----LIAKLTASSQCSVLKPLHNLGDKIVYQ 354
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
++ A G + KA +SGGG+L HID FYE IG+ + VGYGLTE+SPV ARR N+ GS
Sbjct: 355 TVREATGGNLKAVISGGGALAKHIDDFYELIGIPLLVGYGLTETSPVTHARRLYHNLRGS 414
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
G I TE KIVD ET + LP G KG+V +RG+QVMQGY+K P AT +A+DE+GW NTG
Sbjct: 415 SGPAIPETETKIVDPETKKSLPDGEKGLVMIRGTQVMQGYYKKPEATAKAIDEEGWFNTG 474
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+GWI P G LVL GRAKDTIVLS GEN+EP LE A LRS I QI+V+
Sbjct: 475 DLGWITPT----------GDLVLTGRAKDTIVLSNGENIEPQPLENACLRSIYIDQIMVV 524
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS------LLYGELRKWTS- 436
GQDQR GA+IVP+ E + AK ++ + D +E E+T++ L EL +
Sbjct: 525 GQDQRCLGALIVPNVEILEQWAKDHNL-NLDFAEGQLEETLANSQIQKLFRDELNREVKN 583
Query: 437 ----KCSFQIGPIHVVDEPFTVN 455
+ +IG ++ EPF+++
Sbjct: 584 RPGYRIDDRIGVFKLILEPFSMD 606
>gi|298490615|ref|YP_003720792.1| AMP-dependent synthetase and ligase ['Nostoc azollae' 0708]
gi|298232533|gb|ADI63669.1| AMP-dependent synthetase and ligase ['Nostoc azollae' 0708]
Length = 661
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/440 (45%), Positives = 283/440 (64%), Gaps = 26/440 (5%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
D +AT +YTSGTT PKGVML+H NLLHQ+ +L +V E+GD LS+LP WH YER+
Sbjct: 208 DSLATLIYTSGTTAKPKGVMLSHSNLLHQVTTLGTVVQPESGDIVLSILPTWHSYERSGE 267
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
YF+ S+G +YT +R++KDDL+ ++P+Y+I+VP +E++Y G+QKQ + A ++ + +
Sbjct: 268 YFLLSQGCTQVYTNLRSVKDDLKNFKPNYIIAVPRFWESIYEGVQKQFRSQPAKKQQLIK 327
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
L+ +S Y +RI EG L + PS ++ L A+I+ L P L EKLVY
Sbjct: 328 FLLDMSQKYIQARRIAEGLSL--HHVNPSA----VERLGAKILELALLPFQTLGEKLVYA 381
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ A G K +SGGG+LP HID F+E IGV++ GYGLTE+SPV ARRP N+ GS
Sbjct: 382 KVREATGDKIKQVISGGGALPQHIDNFFEIIGVEILQGYGLTETSPVTNARRPWRNLRGS 441
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
G PI TE+KIV ET + LPAG +G+V +RG Q+MQGY++NP ATK+ +D +GW ++G
Sbjct: 442 SGQPIPGTEVKIVSPETRQPLPAGERGLVLLRGPQIMQGYYQNPEATKKVIDAEGWFDSG 501
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+GW+ P + LVL GRAKDTIVL+ GEN+EP +E+A LRS I QI+++
Sbjct: 502 DLGWVTPQND----------LVLTGRAKDTIVLTNGENIEPQPIEDACLRSPYIDQIMLV 551
Query: 384 GQDQRRPGAIIVPDKE--EVLMAAKRLSIVHADASELSKEKTI--SLLYGELRKWTS--- 436
GQDQR GA+IVP+ E E A + +I + ++ E + L EL +
Sbjct: 552 GQDQRSLGALIVPNLEALEKSAANQNDNITASSGQKIDLESKMIQDLFRQELNREVKNRP 611
Query: 437 --KCSFQIGPIHVVDEPFTV 454
+ +IGP ++ EPF++
Sbjct: 612 GYRADDRIGPFQLIIEPFSI 631
>gi|119487286|ref|ZP_01621037.1| AMP-dependent synthetase and ligase [Lyngbya sp. PCC 8106]
gi|119455841|gb|EAW36976.1| AMP-dependent synthetase and ligase [Lyngbya sp. PCC 8106]
Length = 648
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/448 (45%), Positives = 289/448 (64%), Gaps = 32/448 (7%)
Query: 23 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERA 82
G D +AT +YTSGTTG PKGVMLTH NL+HQ+ S+ D+V E GD LS+LP WH + R
Sbjct: 189 GQDSLATLLYTSGTTGKPKGVMLTHGNLVHQLNSIPDVVQPEIGDNVLSLLPTWHSFGRI 248
Query: 83 CGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
YF+ SRG +Y+++R K DL+ ++P YM SVP ++E++Y QKQ+ A+R+ +
Sbjct: 249 GQYFLLSRGCTQIYSSIRYFKRDLKEFKPRYMTSVPRIWESIYEAAQKQLGEQPASRQKI 308
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
A+ +S Y +R+ +G LT + + P + + AR+ +L PLH LA+KLV
Sbjct: 309 AKFCFSLSEQYVLARRVVQG--LTLDGQSPGGMQKAM----ARLKMLLLTPLHQLADKLV 362
Query: 203 YKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
Y+KI++A G + K +SGGGSL MH++ FYE +GV + VGYGLTE+SPV+ ARRP N+
Sbjct: 363 YQKIRAATGGMFKFAISGGGSLAMHLETFYEIVGVDLLVGYGLTETSPVLTARRPKHNLR 422
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
GS G PI TEI+IVD ET VLP KG+V RG Q+M+GYF+NP AT +A+D +GW N
Sbjct: 423 GSAGKPIPQTEIRIVDLETGRVLPRLEKGLVLARGPQIMKGYFENPEATAKAIDPEGWFN 482
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGDIGW++ + LVL GRAKDTIVLS GEN+EP +E+A +RS I Q++
Sbjct: 483 TGDIGWLSRQND----------LVLTGRAKDTIVLSNGENIEPQPIEDACVRSPYIDQMI 532
Query: 382 VIGQDQRRPGAIIVPDKE--EVLMAAKRL--------SIVHADASELSKEKTISLLYGEL 431
++GQDQ+ GA+IVP+ E E ++ L S+ ++ +L + +L EL
Sbjct: 533 LVGQDQKVLGALIVPNFEGLEKWAVSQNLKLKLPHSESVNDSEGLDLESQPVQNLFRQEL 592
Query: 432 -RKWTSKCSF----QIGPIHVVDEPFTV 454
R+ ++ S+ +IGP ++ EPFT+
Sbjct: 593 NREVKNRPSYRVDDRIGPFRLILEPFTM 620
>gi|422302727|ref|ZP_16390086.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9806]
gi|389787971|emb|CCI16697.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9806]
Length = 639
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/450 (45%), Positives = 277/450 (61%), Gaps = 33/450 (7%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 80
T +D+AT +YTSGTTG PKGVML+H NLLHQ+R+L I E GD+ LS+LP WH YE
Sbjct: 175 TKSENDLATLIYTSGTTGQPKGVMLSHGNLLHQVRNLNAIFQPEPGDRVLSILPSWHSYE 234
Query: 81 RACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
R+C YFI ++G +YT++R K DL+++ P M+ VP ++E+LY GIQKQ SA ++
Sbjct: 235 RSCEYFILAQGCTQIYTSIRTFKQDLKQFSPQLMVGVPRLWESLYEGIQKQFSEQSATKQ 294
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+ R L+ S Y KRI + L P + L ARI +L+PLH + +K
Sbjct: 295 KLVRFLLEKSEKYVIAKRIADNLSLDHLHASPG------ERLKARIQSLLLYPLHAIGDK 348
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LVY KI+ A+G K VSGGGSL H+D FYE G+ + VGYGLTE+SPV RR N
Sbjct: 349 LVYGKIRQAVGNKVKILVSGGGSLARHLDTFYEIAGIPILVGYGLTETSPVATVRRIDHN 408
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
+ GS G P+ TEI IVD ++ EVLP G+V +RG QVMQGY+K P AT++A+ DGW
Sbjct: 409 LRGSAGRPVFQTEICIVDLQSKEVLPTEKHGLVLIRGPQVMQGYYKKPEATEKAISPDGW 468
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
++GDIGW+ G LVL GRAKDTIVLS GEN+EP +E+A LRS I Q
Sbjct: 469 FDSGDIGWLT----------AAGDLVLTGRAKDTIVLSNGENIEPQPIEDACLRSPFISQ 518
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI------VHAD-----ASELSKEKTISLLY 428
I+++GQDQ+ GA+IVP+ + + A+ I H+D +S+L +K ++L
Sbjct: 519 IMLVGQDQKALGALIVPNLDILANWAQEQKISLNLPDSHSDRSTILSSDLYSKKVLALYQ 578
Query: 429 GELRKWTS-----KCSFQIGPIHVVDEPFT 453
EL++ + QI ++ EPF+
Sbjct: 579 QELKREVRNRPGYRADDQIKTFELILEPFS 608
>gi|427727828|ref|YP_007074065.1| AMP-forming long-chain acyl-CoA synthetase [Nostoc sp. PCC 7524]
gi|427363747|gb|AFY46468.1| AMP-forming long-chain acyl-CoA synthetase [Nostoc sp. PCC 7524]
Length = 658
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/450 (44%), Positives = 287/450 (63%), Gaps = 33/450 (7%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+ +D++AT +YTSGTTG PKGVML+H NLLHQ+++L +V + GD LS+LP WH YER
Sbjct: 196 LAADNLATLIYTSGTTGKPKGVMLSHSNLLHQVKTLGTVVQPQPGDMVLSILPTWHSYER 255
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
+ YF+ S+G +YT +R++K DL+ ++P++MI+VP ++E++Y G+QKQ A ++
Sbjct: 256 SGEYFLLSQGCTQVYTNLRSVKKDLKDFKPNFMIAVPRLWESIYEGVQKQFREQPAKKQR 315
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
+ +L+ S Y KRI +G L V+ + L ARII + L+PLH L E+L
Sbjct: 316 LIYSLLGASERYIKAKRIAQGLSLDHLH------VSSMGRLGARIIASALFPLHALGERL 369
Query: 202 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
VY K++ A G K +SGGG+LP HID F+E IGV++ GYGLTE+SPV ARRP N+
Sbjct: 370 VYGKVREATGGRIKQVISGGGALPRHIDNFFEIIGVEILQGYGLTETSPVTNARRPWHNL 429
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
GS G PI TE+KIVD ET + L AG +G+V +RG QVMQGY++NP AT + +D +GW
Sbjct: 430 RGSSGQPIPGTEVKIVDPETRQPLAAGKRGLVLLRGPQVMQGYYQNPEATAKVIDAEGWF 489
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
N+GD+GWI P++ LVL GRAKDTIVL+ GEN+EP +E+A LRS I QI
Sbjct: 490 NSGDLGWITPYND----------LVLTGRAKDTIVLTNGENIEPQPIEDACLRSPYIDQI 539
Query: 381 VVIGQDQRRPGAIIVPDKEEV---LMAAKRLSIVHADASELSKEKTIS--------LLYG 429
+++GQDQR GA+IVP+ E + A R I + S +TI+ L
Sbjct: 540 MLVGQDQRCIGALIVPNLEALEKWAEAQNRTLITEDNNLTSSSGETITLESKMIQDLFRQ 599
Query: 430 ELRKWTS-----KCSFQIGPIHVVDEPFTV 454
EL + + ++GP ++ EPF++
Sbjct: 600 ELNREVQNRPGYRPDDRVGPFRLILEPFSI 629
>gi|218245215|ref|YP_002370586.1| AMP-dependent synthetase/ligase [Cyanothece sp. PCC 8801]
gi|257058247|ref|YP_003136135.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 8802]
gi|218165693|gb|ACK64430.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 8801]
gi|256588413|gb|ACU99299.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 8802]
Length = 639
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/452 (43%), Positives = 284/452 (62%), Gaps = 33/452 (7%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 80
T D +AT +YTSGTTG PKGVML+H NLLHQ+ +L ++ + GD+ LS+LP WH YE
Sbjct: 174 TQTKDSLATLIYTSGTTGQPKGVMLSHGNLLHQVTNLDSVIQPKPGDRVLSILPSWHSYE 233
Query: 81 RACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
R+ YF+ S+G + YT++R K DL+R++PH+M+ VP ++E+LY GIQKQ S R+
Sbjct: 234 RSAEYFLLSQGCTMTYTSIRTFKTDLKRFKPHHMVGVPRLWESLYEGIQKQFREQSPTRQ 293
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+ + +S Y +RI + L + + + L AR+ +L PLH+L +K
Sbjct: 294 KLVEFFLNLSERYILAQRIAKNLSLEH------FHASSFERLLARLQATLLSPLHILGDK 347
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
L+Y KI+ +G + + VSGGGSL H+D+FYE + + V VGYGLTE+SPV AR + N
Sbjct: 348 LIYGKIRQGVGGNFETMVSGGGSLAKHLDMFYEIVNLPVLVGYGLTETSPVTNARTHSHN 407
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
+ GS G P+ TEI IVD + ++LP G +G+V VRGSQVMQGY+K P AT++A+D DGW
Sbjct: 408 IRGSSGQPVPETEICIVDPDNRQILPQGQRGLVLVRGSQVMQGYYKKPEATRKAIDPDGW 467
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
+TGD+GW+ P LV+ GRAKDTIVLS GEN+EP +E+A +RS I Q
Sbjct: 468 FDTGDLGWLTPMQD----------LVITGRAKDTIVLSNGENIEPQAIEDACIRSPYIDQ 517
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAK--RLSIVHADASELSKEKTISLLYGE-----LR 432
++V+GQDQ+ GA+IVP+ + ++ AK +L++ DAS +E S LY + R
Sbjct: 518 MMVVGQDQKALGALIVPNLDALVTWAKSQQLTLNLPDASASREEILHSDLYSQPVQSLFR 577
Query: 433 KWTS---------KCSFQIGPIHVVDEPFTVN 455
+ S + QI ++ EPF+++
Sbjct: 578 QELSREVKNRPGYRPDDQIKTFELILEPFSID 609
>gi|434393957|ref|YP_007128904.1| Long-chain-fatty-acid--CoA ligase [Gloeocapsa sp. PCC 7428]
gi|428265798|gb|AFZ31744.1| Long-chain-fatty-acid--CoA ligase [Gloeocapsa sp. PCC 7428]
Length = 655
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/438 (44%), Positives = 281/438 (64%), Gaps = 24/438 (5%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+ +AT +YTSGTTG PKGVMLTH NLLHQ+ L IV + GD+ LS+LP WHVYER C
Sbjct: 205 ETLATLMYTSGTTGKPKGVMLTHGNLLHQVEMLGCIVQPKEGDRVLSILPTWHVYERTCE 264
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
YF+ S+G +YT +R +K D++ ++P+YM+ VP ++E++Y G++KQ A ++ +
Sbjct: 265 YFLLSQGCTQIYTNIRQVKKDIREFKPNYMVGVPRLWESIYEGVKKQFREQPANKQQLID 324
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
+ S + +RI G L N PS L + L A + L P+H L EK+VY+
Sbjct: 325 FFLTKSQQFIEARRIVHGLSL--NSLNPS----LSERLSASVQATALAPIHALGEKIVYR 378
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ A G K +SGGGSL MH++ F+E +GV+V VGYGLTE+SPV ARRP N+ GS
Sbjct: 379 KVREATGGQLKQVISGGGSLAMHLENFFEIVGVEVLVGYGLTETSPVTNARRPWRNLRGS 438
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
G P+ T+++IVD ET + LP G +G+V VRG Q+MQGY++NP AT +A+D +GW +TG
Sbjct: 439 AGQPLPGTQVRIVDPETRQPLPQGERGLVMVRGPQIMQGYYQNPEATAKAIDSEGWFDTG 498
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+GW+ P + LV+ GRAKDTIVL+ GEN+EP +E+A LRS I QI+++
Sbjct: 499 DLGWLTPEND----------LVITGRAKDTIVLTNGENIEPQPIEDACLRSPYIDQIMLV 548
Query: 384 GQDQRRPGAIIVPDKE--EVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTS----- 436
GQDQ+ GA+IVP+ E E A++ + + ++L+ + +L EL +
Sbjct: 549 GQDQKSLGALIVPNLEALEQWAASQNIELKVDSPTDLNSKTIQNLFRQELNREVKNRPGY 608
Query: 437 KCSFQIGPIHVVDEPFTV 454
+ +IGP +V EPF++
Sbjct: 609 RPDDRIGPFELVLEPFSM 626
>gi|390440993|ref|ZP_10229181.1| Long-chain-fatty-acid CoA ligase [Microcystis sp. T1-4]
gi|389835698|emb|CCI33307.1| Long-chain-fatty-acid CoA ligase [Microcystis sp. T1-4]
Length = 639
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/450 (44%), Positives = 276/450 (61%), Gaps = 33/450 (7%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 80
T +D+AT +YTSGTTG PKGVML+H NLLHQ+R+L I E GD+ LS+LP WH YE
Sbjct: 175 TKSENDLATLIYTSGTTGQPKGVMLSHGNLLHQVRNLNAIFQPEPGDRVLSILPSWHSYE 234
Query: 81 RACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
R+C YF ++G +YT++R K DL+++ P M+ VP ++E+LY GIQKQ SA ++
Sbjct: 235 RSCEYFSLAQGCTQIYTSIRTFKQDLKQFSPQLMVGVPRLWESLYEGIQKQFSEQSATKQ 294
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+ R L+ S Y KRI + L P + L ARI +L+PLH + +K
Sbjct: 295 KLVRFLLEKSEKYVIAKRIADNLSLDHLHASPG------ERLKARIQSLLLYPLHAIGDK 348
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LVY KI+ A+G K VSGGGSL H+D FYE G+ + VGYGLTE+SPV RR N
Sbjct: 349 LVYGKIRQAVGNKVKILVSGGGSLARHLDTFYEIAGIPILVGYGLTETSPVATVRRIDHN 408
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
+ GS G P+ TEI IVD + EVLP G+V +RG QVMQGY+K P AT++A+ DGW
Sbjct: 409 LRGSAGRPVFQTEICIVDLHSKEVLPTEKHGLVLIRGPQVMQGYYKKPEATEKAISPDGW 468
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
++GDIGW+ G LVL GRAKDTIVLS GEN+EP +E+A LRS I Q
Sbjct: 469 FDSGDIGWLT----------AAGDLVLTGRAKDTIVLSNGENIEPQPIEDACLRSPFISQ 518
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI------VHAD-----ASELSKEKTISLLY 428
I+++GQDQ+ GA+IVP+ + + A+ I +H+D +S+L +K ++L
Sbjct: 519 IMLVGQDQKALGALIVPNLDILANWAQEQKISLNLPDLHSDRSTILSSDLYSKKVLALYQ 578
Query: 429 GELRKWTS-----KCSFQIGPIHVVDEPFT 453
EL++ + QI ++ EPF+
Sbjct: 579 QELKREVRNRPGYRTDDQIKTFELILEPFS 608
>gi|443647067|ref|ZP_21129585.1| AMP-binding enzyme family protein [Microcystis aeruginosa
DIANCHI905]
gi|159030818|emb|CAO88497.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443335613|gb|ELS50079.1| AMP-binding enzyme family protein [Microcystis aeruginosa
DIANCHI905]
Length = 639
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/451 (45%), Positives = 281/451 (62%), Gaps = 33/451 (7%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 80
T G +D+AT +YTSGTTG PKGVML+H NLLHQ+R+L I + GD+ LS+LP WH YE
Sbjct: 175 TKGENDLATLIYTSGTTGQPKGVMLSHGNLLHQVRNLNAIFQPDPGDRVLSILPSWHSYE 234
Query: 81 RACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
R+C YF ++G +YT++R K DL+++ P M+ VP ++E+LY GIQKQ SA ++
Sbjct: 235 RSCEYFSLAQGCTQIYTSIRTFKQDLKQFSPQLMVGVPRLWESLYEGIQKQFSEQSATKQ 294
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+ R L+ S Y KRI + L + I+ L ARI +L+PLH + +K
Sbjct: 295 KLVRFLLEKSEKYVIAKRIADNLSLDHLH------ASGIERLKARIQSLLLYPLHAIGDK 348
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LVY KI+ A+G K VSGGGSL H+D FYE G+ + VGYGLTE+SPV RR N
Sbjct: 349 LVYSKIRQAVGNKVKILVSGGGSLARHLDTFYEIAGIPILVGYGLTETSPVATVRRIDHN 408
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
+ GS G P+ TEI IVD + EVLP G+V +RG QVMQGY+K P AT++A+ DGW
Sbjct: 409 LRGSAGRPVFQTEICIVDLHSKEVLPTEKHGLVLIRGPQVMQGYYKKPEATEKAISPDGW 468
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
++GDIGW+ G LVL GRAKDTIVLS GEN+EP +E+A LRS I Q
Sbjct: 469 FDSGDIGWLT----------AAGDLVLTGRAKDTIVLSNGENIEPQPIEDACLRSPFISQ 518
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAA--KRLSI----VHAD-----ASELSKEKTISLLY 428
I+++GQDQ+ GA+IVP+ + + A ++LS+ H+D +S+L +K ++L
Sbjct: 519 IMLVGQDQKALGALIVPNLDILANWAHEQKLSLNLPDAHSDRSTILSSDLYSKKVLALYQ 578
Query: 429 GELRKWTS-----KCSFQIGPIHVVDEPFTV 454
EL++ + QI ++ EPF++
Sbjct: 579 QELKREVRNRPGYRTDDQIKTFELILEPFSL 609
>gi|425470138|ref|ZP_18849008.1| Genome sequencing data, contig C328 [Microcystis aeruginosa PCC
9701]
gi|389884320|emb|CCI35368.1| Genome sequencing data, contig C328 [Microcystis aeruginosa PCC
9701]
Length = 639
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/451 (44%), Positives = 280/451 (62%), Gaps = 33/451 (7%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 80
T +D+AT +YTSGTTG PKGVML+H NLLHQ+R+L I + GD+ LS+LP WH YE
Sbjct: 175 TKSENDLATLIYTSGTTGQPKGVMLSHGNLLHQVRNLNAIFQPDPGDRVLSILPSWHSYE 234
Query: 81 RACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
R+C YF ++G +YT++R K DL+++ P M+ VP ++E+LY GIQKQ SA ++
Sbjct: 235 RSCEYFSLAQGCTQIYTSIRTFKQDLKQFSPQLMVGVPRLWESLYEGIQKQFSEQSATKQ 294
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+ R L+ S Y KRI + L P + L ARI +L+PLH + +K
Sbjct: 295 KLVRFLLEKSEKYVIAKRIADNLSLDHLHASPG------ERLKARIQSLLLYPLHAIGDK 348
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LVY KI+ A+G K VSGGGSL H+D FYE G+ + VGYGLTE+SPV RR N
Sbjct: 349 LVYGKIRQAVGNKVKILVSGGGSLARHLDTFYEIAGIPILVGYGLTETSPVATVRRIDHN 408
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
+ GS G P+ TEI IVD ++ EVLP G+V +RG QVMQGY+K P AT++A+ DGW
Sbjct: 409 LRGSAGRPVFQTEICIVDLQSKEVLPTEKHGLVLIRGPQVMQGYYKKPEATEKAISPDGW 468
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
++GDIGW+ G LVL GRAKDTIVLS GEN+EP +E+A LRS I Q
Sbjct: 469 FDSGDIGWLT----------AAGDLVLTGRAKDTIVLSNGENIEPQPIEDACLRSPFISQ 518
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAA--KRLSI----VHAD-----ASELSKEKTISLLY 428
I+++GQDQ+ GA+IVP+ + + A ++LS+ H+D +S+L +K ++L
Sbjct: 519 IMLVGQDQKALGALIVPNLDILANWAQEQKLSLNLPDAHSDRSTILSSDLYSKKVLALYQ 578
Query: 429 GELRKWTS-----KCSFQIGPIHVVDEPFTV 454
EL++ + QI ++ EPF++
Sbjct: 579 QELKREVRNRPGYRTDDQIKTFELILEPFSL 609
>gi|428311361|ref|YP_007122338.1| AMP-forming long-chain acyl-CoA synthetase [Microcoleus sp. PCC
7113]
gi|428252973|gb|AFZ18932.1| AMP-forming long-chain acyl-CoA synthetase [Microcoleus sp. PCC
7113]
Length = 672
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/453 (44%), Positives = 284/453 (62%), Gaps = 39/453 (8%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
D +AT +YTSGTTG PKGVMLTH NLLHQ+ ++ + E GDK LS+LP WH YERA
Sbjct: 207 DTLATLLYTSGTTGKPKGVMLTHGNLLHQVVNIGSVWLPEPGDKVLSILPSWHAYERAVE 266
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
YFI S+G +YT +RN+K DL+ ++P M+ VP ++E++Y G+QKQ A ++ + +
Sbjct: 267 YFILSQGCTQIYTNLRNVKKDLREFKPQLMVGVPRLWESIYEGVQKQFREQPANKQRLVQ 326
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
+ +S Y +R+ +G L QPS I+ L AR+ +LWP+H LA K+VY+
Sbjct: 327 NFLNVSKRYIEARRLAQGLSL--GNLQPSA----IERLKARVQATVLWPVHQLANKIVYQ 380
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ A G K +SGGGSL H+D F+E IGV+V VGYGLTE+SPV RRP N+ S
Sbjct: 381 KVREATGGQIKIVISGGGSLARHLDDFFEIIGVEVLVGYGLTETSPVTNVRRPWRNLRYS 440
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
G P+ TEI+IV+ ET ++LP G +G+V VRG QVMQGY+K P AT +A+D DGW +TG
Sbjct: 441 SGPPMPGTEIRIVNPETRQLLPQGQQGLVMVRGPQVMQGYYKKPEATAKAIDADGWFDTG 500
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+GW+ P + LVL GRAKDTIVL+ GEN+EP +E+A +RS+ I QI+++
Sbjct: 501 DLGWVTPENH----------LVLTGRAKDTIVLTNGENIEPQPIEDACIRSAYIDQIMLV 550
Query: 384 GQDQRRPGAIIVPDKEEVLM--AAKRLSIVHADAS---------------ELSKEKTISL 426
GQDQR GA+IVP+ E + AA+ L++ DA +L ++ SL
Sbjct: 551 GQDQRSLGALIVPNLEALQQWAAAQNLNLRLPDAVSPQSAAPPEEFRTAIDLQSKEVQSL 610
Query: 427 LYGELRKWTS-----KCSFQIGPIHVVDEPFTV 454
EL + + +IG ++ EPF++
Sbjct: 611 FRSELNREVKNRPGYRPDDRIGSFELILEPFSL 643
>gi|428320800|ref|YP_007118682.1| Long-chain-fatty-acid--CoA ligase [Oscillatoria nigro-viridis PCC
7112]
gi|428244480|gb|AFZ10266.1| Long-chain-fatty-acid--CoA ligase [Oscillatoria nigro-viridis PCC
7112]
Length = 649
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/436 (45%), Positives = 271/436 (62%), Gaps = 27/436 (6%)
Query: 27 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 86
+AT +YTSGTTG PKGVMLTH NLLHQ+ + I+ E G+ LS+LP WH YER YF
Sbjct: 205 LATLLYTSGTTGKPKGVMLTHGNLLHQVTTFGTILQPEIGESALSILPSWHAYERTVEYF 264
Query: 87 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 146
+ S+G +YT++R K D + Y+P YMISVP ++E++Y +QKQ A ++ + L
Sbjct: 265 LLSQGCTQIYTSIRYFKQDFKAYKPQYMISVPRIWESIYEAVQKQFREQPANKQKLVNFL 324
Query: 147 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 206
+ S Y +RI++G L+ S + L ARI +LWP+H LAEKLVY+K+
Sbjct: 325 LSASQQYIENRRIFQGLTLSLKPASAS------EKLIARIKSILLWPVHALAEKLVYQKV 378
Query: 207 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 265
+ A G K +SGGGSL H+D F+E + + VGYGLTE+SPV+ RRP N+ GS G
Sbjct: 379 REATGGRFKWAISGGGSLATHLDNFFEIANIGLLVGYGLTETSPVLTVRRPWHNLKGSAG 438
Query: 266 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 325
PI TEIKIVD ET + LPAG +G+V RG Q+MQGY+ NP AT + +D +GW +TGD+
Sbjct: 439 QPIAQTEIKIVDPETRQQLPAGQRGLVLARGPQIMQGYYLNPQATAKVIDPEGWFDTGDL 498
Query: 326 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 385
GW+ P G L+L GRAKDTIVLS GEN+EP +E+A +RS I QI+++GQ
Sbjct: 499 GWLTP----------GNDLILTGRAKDTIVLSNGENIEPQPIEDACVRSPYIDQIMLVGQ 548
Query: 386 DQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS-KEKTISLLY-GELRKWTS-----KC 438
DQ+ GA+IVP+ E V K + E+ KTI L+ EL + +
Sbjct: 549 DQKSVGALIVPNAEAV---QKWAETQNPPLHEIDWNSKTIQDLFRKELNREVQNRPGYRA 605
Query: 439 SFQIGPIHVVDEPFTV 454
+IGP ++ EPF++
Sbjct: 606 DDRIGPFRLIQEPFSI 621
>gi|427707121|ref|YP_007049498.1| long-chain-fatty-acid--CoA ligase [Nostoc sp. PCC 7107]
gi|427359626|gb|AFY42348.1| Long-chain-fatty-acid--CoA ligase [Nostoc sp. PCC 7107]
Length = 656
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/445 (44%), Positives = 283/445 (63%), Gaps = 31/445 (6%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
D +AT +YTSGTTG PKGVML+H NL+HQ+RSL IV E GD LS+LP WH YER+
Sbjct: 199 DSLATLIYTSGTTGKPKGVMLSHSNLMHQVRSLRAIVQPEPGDIVLSILPSWHSYERSGE 258
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
YF+ S+G +YT +R++K DL+ ++P++MI+VP ++E++Y G+QKQ A+++ +
Sbjct: 259 YFLLSQGCSQIYTNLRSVKRDLKEFKPNFMIAVPRLWESIYEGVQKQFREQPASKQRLIN 318
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
L+ +S Y +RI +G CL + I+ + A+I L PLH+L EK+VY
Sbjct: 319 FLVGMSEKYIKAQRIAQGLCLEHVN------ASAIERIGAKIQALALLPLHILGEKIVYA 372
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ A G K +SGGG+LP HID F+E IGV + GYGLTE+SPV ARRP N GS
Sbjct: 373 KVREATGGRIKHVISGGGALPRHIDNFFEIIGVDILQGYGLTETSPVTNARRPWRNFRGS 432
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
G PI TE+KIVD E + L G +G+V ++G Q+MQGY++NP AT +A+D +GW ++G
Sbjct: 433 SGQPIPGTEVKIVDPENRQPLAKGQRGLVLLKGPQIMQGYYQNPEATAKAIDAEGWFDSG 492
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+GW+ P + LVL GRAKDTIVL+ GEN+EP +E+A LRS I QI+++
Sbjct: 493 DLGWVTPEND----------LVLTGRAKDTIVLTNGENIEPQPIEDACLRSPYIDQIMLV 542
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSI---VHADASELS-----KEKTISLLY-GELRKW 434
GQDQR GA+IVP+ E + A ++ + SELS + K I L+ EL +
Sbjct: 543 GQDQRSIGALIVPNLEALEKWADSQNVQLRLPEQNSELSTSVDLESKIIQDLFRQELNRE 602
Query: 435 TS-----KCSFQIGPIHVVDEPFTV 454
+ +IGP ++ EPF++
Sbjct: 603 VQNRPGYRLDDRIGPFRLILEPFSI 627
>gi|425465198|ref|ZP_18844508.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9809]
gi|389832583|emb|CCI23641.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9809]
Length = 639
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/450 (44%), Positives = 278/450 (61%), Gaps = 33/450 (7%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 80
T +D+AT +YTSGTTG PKGVML+H NLLHQ+R+L I + GD+ LS+LP WH YE
Sbjct: 175 TKSENDLATLIYTSGTTGQPKGVMLSHGNLLHQVRNLNAIFQPDPGDRVLSILPSWHSYE 234
Query: 81 RACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
R+C YF ++G +YT++R K DL+++ P M+ VP ++E+LY GIQKQ SA ++
Sbjct: 235 RSCEYFSLAQGCTQIYTSIRTFKSDLKQFSPQLMVGVPRLWESLYEGIQKQFSEQSATKQ 294
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+ R L+ S Y KRI + L + I+ L ARI +L+PLH + +K
Sbjct: 295 KLVRFLLEKSEKYVIAKRIADNLSLDHLH------ASEIERLKARIQSLLLYPLHAIGDK 348
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LVY KI+ A+G K VSGGGSL H+D FYE G+ + VGYGLTE+SPV RR N
Sbjct: 349 LVYGKIRQAVGNKVKILVSGGGSLARHLDTFYEIAGIPILVGYGLTETSPVATVRRIDHN 408
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
+ GS G P+ TEI IVD + EVLP G+V +RG QVMQGY+K P AT++A+ DGW
Sbjct: 409 LRGSAGRPVFQTEICIVDLHSKEVLPTEKHGLVLIRGPQVMQGYYKKPEATEKAISPDGW 468
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
++GDIGW+ G LVL GRAKDTIVLS GEN+EP +E+A LRS I Q
Sbjct: 469 FDSGDIGWLT----------AAGDLVLTGRAKDTIVLSNGENIEPQPIEDACLRSPFISQ 518
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI------VHAD-----ASELSKEKTISLLY 428
I+++GQDQ+ GA+IVP+ + + A+ I +H+D +S+L +K ++L
Sbjct: 519 IMLVGQDQKALGALIVPNLDILANWAQEQKISLNLPDLHSDRSTILSSDLYSKKVLALYQ 578
Query: 429 GELRKW-----TSKCSFQIGPIHVVDEPFT 453
EL++ + + QI ++ EPF+
Sbjct: 579 QELKREVRNRPSYRTDDQIKTFELILEPFS 608
>gi|166368626|ref|YP_001660899.1| long-chain-fatty-acid CoA ligase [Microcystis aeruginosa NIES-843]
gi|166090999|dbj|BAG05707.1| long-chain-fatty-acid CoA ligase [Microcystis aeruginosa NIES-843]
Length = 639
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/450 (44%), Positives = 278/450 (61%), Gaps = 33/450 (7%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 80
T +D+AT +YTSGTTG PKGVML+H NLLHQ+R+L I + GD+ LS+LP WH YE
Sbjct: 175 TKSENDLATLIYTSGTTGQPKGVMLSHGNLLHQVRNLNAIFQPDPGDRVLSILPSWHSYE 234
Query: 81 RACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
R+C YF ++G +YT++R K DL+++ P M+ VP ++E+LY GIQKQ SA ++
Sbjct: 235 RSCEYFSLAQGCTQIYTSIRTFKSDLKQFSPQLMVGVPRLWESLYEGIQKQFSEQSATKQ 294
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+ R L+ S Y KRI + L + I+ L ARI +L+PLH + +K
Sbjct: 295 KLVRFLLEKSEKYVIAKRIADNLSLDHLH------ASEIERLKARIQSLLLYPLHAIGDK 348
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LVY KI+ A+G K VSGGGSL H+D FYE G+ + VGYGLTE+SPV RR N
Sbjct: 349 LVYGKIRQAVGNKVKILVSGGGSLARHLDTFYEIAGIPILVGYGLTETSPVATVRRIDHN 408
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
+ GS G P+ TEI IVD + EVLP G+V +RG QVMQGY+K P AT++A+ DGW
Sbjct: 409 LRGSAGRPVFQTEICIVDLHSKEVLPTEKHGLVLIRGPQVMQGYYKKPEATEKAISPDGW 468
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
++GDIGW+ G LVL GRAKDTIVLS GEN+EP +E+A LRS I Q
Sbjct: 469 FDSGDIGWLT----------AAGDLVLTGRAKDTIVLSNGENIEPQPIEDACLRSPFISQ 518
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI------VHAD-----ASELSKEKTISLLY 428
I+++GQDQ+ GA+IVP+ + + A+ I +H+D +S+L +K ++L
Sbjct: 519 IMLVGQDQKALGALIVPNLDILANWAQEQKISLNLPDLHSDRSTILSSDLYSKKVLALYQ 578
Query: 429 GELRKW-----TSKCSFQIGPIHVVDEPFT 453
EL++ + + QI ++ EPF+
Sbjct: 579 QELKREVRNRPSYRTDDQIKTFELILEPFS 608
>gi|443327638|ref|ZP_21056258.1| AMP-forming long-chain acyl-CoA synthetase [Xenococcus sp. PCC
7305]
gi|442792730|gb|ELS02197.1| AMP-forming long-chain acyl-CoA synthetase [Xenococcus sp. PCC
7305]
Length = 640
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/376 (49%), Positives = 252/376 (67%), Gaps = 17/376 (4%)
Query: 27 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 86
+AT +YTSGTTG PKGVML+H NLLHQ+ +L I+ E GD+ LS+LP WH YER+ Y+
Sbjct: 182 LATLIYTSGTTGKPKGVMLSHGNLLHQVNNLRQIILCEQGDRVLSILPSWHAYERSAEYY 241
Query: 87 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 146
+ S+G YT +R+LK DL+ YQPHYMI VP ++E+LY G+QKQ + ++ +
Sbjct: 242 LLSQGCTQYYTNLRSLKSDLKTYQPHYMIGVPRLWESLYEGVQKQFREQAPTKQKLINWF 301
Query: 147 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 206
+S Y +R+ G L + QPS + L +A + L PLHLL +K+VY+K+
Sbjct: 302 FNLSQKYVMARRLSRGLDL--DNLQPSAIAKL----FATLQTFALLPLHLLGDKIVYQKV 355
Query: 207 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 265
+ A+G K VSGGGSL H+D FYE + + V VGYGLTE++PV AR N + G
Sbjct: 356 RDAVGGKVKTFVSGGGSLAKHLDDFYELVNIPVLVGYGLTETAPVTNARTLDRNFSKTSG 415
Query: 266 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 325
PI TEIKIV+ ET E LP G+KG+V +RGSQVMQGY+KNP AT +A+D +GW ++GD+
Sbjct: 416 QPIAETEIKIVNPETKEALPTGAKGLVLIRGSQVMQGYYKNPEATAKAIDAEGWFDSGDL 475
Query: 326 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 385
GW+ P + LVL GRAKDTIVL+ GEN+EP +E+A +RSS I QI+++GQ
Sbjct: 476 GWVTPDND----------LVLTGRAKDTIVLTNGENIEPQPIEDACIRSSYIDQIMLVGQ 525
Query: 386 DQRRPGAIIVPDKEEV 401
DQR GA+IVP+ E V
Sbjct: 526 DQRALGALIVPNLETV 541
>gi|425448641|ref|ZP_18828485.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 7941]
gi|389768094|emb|CCI06699.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 7941]
Length = 639
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/451 (44%), Positives = 276/451 (61%), Gaps = 33/451 (7%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 80
T +D+AT +YTSGTTG PKGVML+H NLLHQ+R+L I + GD+ LS+LP WH YE
Sbjct: 175 TKSENDLATLIYTSGTTGQPKGVMLSHGNLLHQVRNLNAIFQPDPGDRVLSILPSWHSYE 234
Query: 81 RACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
R+C YF ++G +YT++R K DL+++ P M+ VP ++E+LY GIQKQ SA ++
Sbjct: 235 RSCEYFSLAQGCTQIYTSIRTFKSDLKQFSPQLMVGVPRLWESLYEGIQKQFSEQSATKQ 294
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+ R L+ S Y KRI + L + I+ L ARI +L+PLH + +K
Sbjct: 295 KLVRFLLEKSEKYVIAKRIADNLSLDHLH------ASEIERLKARIQSLLLYPLHAIGDK 348
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LVY KI+ A+G K VSGGGSL H+D FYE G+ + VGYGLTE+SPV RR N
Sbjct: 349 LVYGKIRQAVGNKVKILVSGGGSLARHLDTFYEIAGIPILVGYGLTETSPVATVRRIDHN 408
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
+ GS G P+ TEI IVD + EVLP G+V +RG QVMQGY+K P AT +A+ DGW
Sbjct: 409 LRGSAGRPVFQTEICIVDLHSKEVLPTEKHGLVLIRGPQVMQGYYKKPEATDKAISPDGW 468
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
++GDIGW+ G LVL GRAKDTIVLS GEN+EP +E+A LRS I Q
Sbjct: 469 FDSGDIGWLT----------AAGDLVLTGRAKDTIVLSNGENIEPQPIEDACLRSPFISQ 518
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI------VHAD-----ASELSKEKTISLLY 428
I+++GQDQ+ GA+IVP+ + + A+ I +H+D +S+L +K + L
Sbjct: 519 IMLVGQDQKALGALIVPNLDILANWAQEQKISLNLPDLHSDRSTILSSDLYSKKVLDLYQ 578
Query: 429 GELRKWTS-----KCSFQIGPIHVVDEPFTV 454
EL++ + QI ++ EPF++
Sbjct: 579 QELKREVRNRPGYRADDQIKTFELILEPFSL 609
>gi|434399935|ref|YP_007133939.1| Long-chain-fatty-acid--CoA ligase [Stanieria cyanosphaera PCC 7437]
gi|428271032|gb|AFZ36973.1| Long-chain-fatty-acid--CoA ligase [Stanieria cyanosphaera PCC 7437]
Length = 640
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/459 (41%), Positives = 284/459 (61%), Gaps = 35/459 (7%)
Query: 14 GKHYKYETIGS--DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLS 71
GK++ + + +++AT +YTSGTTG PKG ML+H NLLHQ+ +L I+ A+ GD+ LS
Sbjct: 166 GKNHSLQPVQQTKENLATLIYTSGTTGKPKGAMLSHGNLLHQVNNLTSIIKADVGDRVLS 225
Query: 72 MLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
+LP WH YER+ YF+F++G L YT +R+LK DLQ+YQPHYM++VP ++E++Y G+QKQ
Sbjct: 226 ILPSWHAYERSAEYFLFAQGCTLYYTNLRSLKSDLQKYQPHYMVAVPRLWESIYEGVQKQ 285
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
+++ + I+ Y +RI EG L +++ L A+ ++L
Sbjct: 286 FREQPPSKQKLINYFFEIAEEYIEARRIAEGMSLEH------LNLSVGARLLAKTKASLL 339
Query: 192 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
PL+ L +++V+KK++ A+G + K V+GGGSL H+D FYE + + + VGYGLTE+SPV
Sbjct: 340 LPLYNLGDRIVFKKVRQAVGSNVKTLVNGGGSLAKHLDDFYEIVKIPLLVGYGLTETSPV 399
Query: 251 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSAT 310
AR N G+ G PI TEIKIVD +T + LP G +G+V +RG QVMQGY+KNP AT
Sbjct: 400 TNARTLKHNFRGTAGKPIPETEIKIVDPQTRQTLPQGQQGLVLIRGPQVMQGYYKNPEAT 459
Query: 311 KQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA 370
+A+D +GW ++GD+GW+ P + L+L GRAKDTIVLS GEN+EP +E+A
Sbjct: 460 AKAIDPEGWFDSGDLGWVTPDND----------LILTGRAKDTIVLSNGENIEPQPIEDA 509
Query: 371 ALRSSLIRQIVVIGQDQRRPGAIIVPD-----------KEEVLMAAKRLSIVHADASELS 419
+RS I QI+++GQDQR GA+IVP+ K + + A S+ S+L
Sbjct: 510 CVRSPYIDQIMLVGQDQRALGALIVPNLDALQQWATNQKLNLNLPAPNTSLAEISQSDLY 569
Query: 420 KEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFT 453
+ +L EL + +IG ++ EPF+
Sbjct: 570 SKPVQNLFRQELNSQVQNRPGYRADDRIGTFRLILEPFS 608
>gi|440680365|ref|YP_007155160.1| Long-chain-fatty-acid--CoA ligase [Anabaena cylindrica PCC 7122]
gi|428677484|gb|AFZ56250.1| Long-chain-fatty-acid--CoA ligase [Anabaena cylindrica PCC 7122]
Length = 660
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/441 (43%), Positives = 280/441 (63%), Gaps = 26/441 (5%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 83
S+ +AT +YTSGTTG PKGVML+H+NLLHQ++SL +V + G+ LS+LP WH YER+
Sbjct: 206 SETLATLIYTSGTTGKPKGVMLSHQNLLHQVKSLGTVVQPQKGNIVLSILPTWHSYERSG 265
Query: 84 GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
YF+ S+G +YT +R +K DL++++P+YMI+VP ++E++Y G+QKQ A ++ +
Sbjct: 266 EYFLLSQGCTQIYTNLRAVKQDLKKFKPNYMIAVPRLWESIYEGVQKQFREQPAKKQQLI 325
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
+ L+ +S Y +RI +G L + L A+I LWP L EKLVY
Sbjct: 326 QFLLDMSQKYITARRITQGLSLDHIHASSG------ERLGAKIREIALWPFQALGEKLVY 379
Query: 204 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K++ A G K +SGGG+LP HID F+E +GV++ GYGLTE+SPV ARRP N+ G
Sbjct: 380 AKVREATGGKIKQVISGGGALPRHIDNFFEIVGVEILQGYGLTETSPVTNARRPWRNLRG 439
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S G PI TE+KIV+ ET + LP G +G+V ++G Q+MQGY++NP ATK+ +D +GW ++
Sbjct: 440 SSGQPIPGTEVKIVNPETRQPLPVGERGLVLLKGPQIMQGYYQNPEATKKVIDAEGWFDS 499
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD+GW+ P + LVL GRAKDTIVL+ GEN+EP +E+A LRS + QI++
Sbjct: 500 GDLGWVTPQND----------LVLTGRAKDTIVLTNGENIEPQPIEDACLRSPYVDQIML 549
Query: 383 IGQDQRRPGAIIVPDKE--EVLMAAKRLSIVHADASELSKEKTI--SLLYGELRKWTS-- 436
+GQDQR GA+IVP+ E E + I + + ++ E I L EL +
Sbjct: 550 VGQDQRSIGALIVPNLEALEKWAETQNDKITASTSQKIDLESKIIQDLFRQELNREVKDR 609
Query: 437 ---KCSFQIGPIHVVDEPFTV 454
+ +IGP ++ EPF++
Sbjct: 610 PGYRADDRIGPFKLILEPFSI 630
>gi|425454194|ref|ZP_18833940.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9807]
gi|389805196|emb|CCI15162.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9807]
Length = 639
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/451 (44%), Positives = 280/451 (62%), Gaps = 33/451 (7%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 80
T G +D+AT +YTSGTTG PKGVML+H NLLHQ+R+L I + GD+ LS+LP WH YE
Sbjct: 175 TKGENDLATLIYTSGTTGQPKGVMLSHGNLLHQVRNLNAIFQPDPGDRVLSILPSWHSYE 234
Query: 81 RACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
R+C YF ++G +YT++R K DL+++ P M+ VP ++E+LY GIQKQ A ++
Sbjct: 235 RSCEYFSLAQGCTQIYTSIRTFKQDLKQFSPQLMVGVPRLWESLYEGIQKQFSQQPAKKQ 294
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+ + + S Y KRI + L P+ + L ARI +L+PLH + +K
Sbjct: 295 KLVQFFLEKSEKYVIAKRIADNLSLDHLHASPT------ERLKARIQSLLLYPLHAIGDK 348
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LVY KI+ A+G K VSGGGSL H+D FYE G+ + VGYGLTE+SPV RR N
Sbjct: 349 LVYGKIRQAVGNKVKIFVSGGGSLARHLDTFYEIAGIPILVGYGLTETSPVATVRRIDHN 408
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
+ GS G P+ TEI IVD + EVLP G+V +RG QVMQGY+K P AT++A+ DGW
Sbjct: 409 LRGSAGRPVFQTEICIVDLHSKEVLPTEKHGLVLIRGPQVMQGYYKKPEATEKAISPDGW 468
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
++GDIGW+ G LVL GRAKDTIVLS GEN+EP +E+A LRS I Q
Sbjct: 469 FDSGDIGWLT----------AAGDLVLTGRAKDTIVLSNGENIEPQPIEDACLRSPFISQ 518
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAA--KRLSI----VHAD-----ASELSKEKTISLLY 428
I+++GQDQ+ GA+IVP+ + + A ++LS+ +H+D +S+L +K + L
Sbjct: 519 IMLVGQDQKALGALIVPNLDILANWAQEQKLSLNLPDLHSDRSTILSSDLYSKKVLDLYQ 578
Query: 429 GELRKW-----TSKCSFQIGPIHVVDEPFTV 454
EL++ + + QI ++ EPF++
Sbjct: 579 QELKREVRNRPSYRTDDQIKTFELILEPFSL 609
>gi|425460505|ref|ZP_18839986.1| Genome sequencing data, contig C328 [Microcystis aeruginosa PCC
9808]
gi|389826794|emb|CCI22432.1| Genome sequencing data, contig C328 [Microcystis aeruginosa PCC
9808]
Length = 639
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/451 (44%), Positives = 280/451 (62%), Gaps = 33/451 (7%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 80
T G +D+AT +YTSGTTG PKGVML+H NLLHQ+R+L I + GD+ LS+LP WH YE
Sbjct: 175 TKGENDLATLIYTSGTTGQPKGVMLSHGNLLHQVRNLNAIFQPDPGDRVLSILPSWHSYE 234
Query: 81 RACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
R+C YFI ++G +YT++R K DL+++ P M+ VP ++E+LY GIQKQ A ++
Sbjct: 235 RSCEYFILAQGCTQIYTSIRTFKQDLKQFSPQLMVGVPRLWESLYEGIQKQFSQQPAKKQ 294
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+ + + S Y KRI + L + I+ L ARI +L+PLH + +K
Sbjct: 295 KLVQFFLEKSEKYVIAKRIADNLSLDHLH------ASGIERLKARIQSLLLYPLHAIGDK 348
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LVY KI+ A+G K VSGGGSL H+D FYE G+ + VGYGLTE+SPV RR N
Sbjct: 349 LVYGKIRQAVGNKVKILVSGGGSLARHLDTFYEIAGIPILVGYGLTETSPVATVRRIDHN 408
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
+ GS G P+ TEI IVD + EVLP G+V +RG QVMQGY+K P AT++A+ DGW
Sbjct: 409 LRGSAGRPVFQTEICIVDLHSKEVLPTEKHGLVLIRGPQVMQGYYKKPEATEKAISPDGW 468
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
++GDIGW+ G LVL GRAKDTIVLS GEN+EP +E+A LRS I Q
Sbjct: 469 FDSGDIGWLT----------AAGDLVLTGRAKDTIVLSNGENIEPQPIEDACLRSPFISQ 518
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAA--KRLSI----VHAD-----ASELSKEKTISLLY 428
I+++GQDQ+ GA+IVP+ + + A ++LS+ H+D +S+L +K ++L
Sbjct: 519 IMLVGQDQKALGALIVPNLDILANWAQEQKLSLNLPDAHSDRSTILSSDLYSKKVLALYQ 578
Query: 429 GELRKWTS-----KCSFQIGPIHVVDEPFTV 454
EL++ + QI ++ EPF++
Sbjct: 579 QELKREVRNRPGYRTDDQIKTFELILEPFSL 609
>gi|425443867|ref|ZP_18823930.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9443]
gi|389733516|emb|CCI02743.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9443]
Length = 639
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/451 (44%), Positives = 279/451 (61%), Gaps = 33/451 (7%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 80
T G +D+AT +YTSGTTG PKGVML+H NLLHQ+R+L I + GD+ LS+LP WH YE
Sbjct: 175 TKGENDLATLIYTSGTTGQPKGVMLSHGNLLHQVRNLNAIFQPDPGDRVLSILPSWHSYE 234
Query: 81 RACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
R+C YF ++G +YT++R K DL+++ P M+ VP ++E+LY GIQKQ A ++
Sbjct: 235 RSCEYFSLAQGCTQIYTSIRTFKQDLKQFSPQLMVGVPRLWESLYEGIQKQFSQQPAKKQ 294
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+ + + S Y KRI + L P + L ARI +L+PLH + +K
Sbjct: 295 KLVQFFLEKSEKYVIAKRIADNLSLDHLHASPG------ERLKARIQSLLLYPLHAIGDK 348
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LVY KI+ A+G K VSGGGSL H+D FYE G+ + VGYGLTE+SPV RR N
Sbjct: 349 LVYSKIRQAVGNKVKIFVSGGGSLARHLDTFYEIAGIPILVGYGLTETSPVATVRRIDHN 408
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
+ GS G P+ TEI IVD + EVLP G+V +RG QVM+GY+K P AT++A+ DGW
Sbjct: 409 LRGSAGRPVLQTEISIVDLHSKEVLPTEKHGLVLIRGPQVMRGYYKKPEATEKAISPDGW 468
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
++GDIGW+ G LVL GRAKDTIVLS GEN+EP +E+A LRS I Q
Sbjct: 469 FDSGDIGWLT----------AAGDLVLTGRAKDTIVLSNGENIEPQPIEDACLRSPFISQ 518
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAA--KRLSI----VHAD-----ASELSKEKTISLLY 428
I+++GQDQ+ GA+IVP+ + + A ++LS+ +H+D +S+L +K + L
Sbjct: 519 IMLVGQDQKALGALIVPNLDILANWAQEQKLSLNLPDLHSDRSTILSSDLYSKKVLDLYQ 578
Query: 429 GELRKW-----TSKCSFQIGPIHVVDEPFTV 454
EL++ + + QI ++ EPF++
Sbjct: 579 QELKREVRNRPSYRTDDQIKTFELILEPFSL 609
>gi|443321847|ref|ZP_21050887.1| AMP-forming long-chain acyl-CoA synthetase [Gloeocapsa sp. PCC
73106]
gi|442788463|gb|ELR98156.1| AMP-forming long-chain acyl-CoA synthetase [Gloeocapsa sp. PCC
73106]
Length = 633
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/439 (44%), Positives = 273/439 (62%), Gaps = 26/439 (5%)
Query: 27 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 86
+AT +YTSGTTG PKGVML+H NLLHQ+ +L I+ E GDK LS+LP WH YERA Y+
Sbjct: 183 LATLIYTSGTTGKPKGVMLSHGNLLHQVNNLNTIIQPEPGDKVLSILPSWHSYERAAEYY 242
Query: 87 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 146
I S+G +YT +RN K DLQ++QP++MI VP ++E++Y GIQKQ+ R+ + +
Sbjct: 243 ILSQGCTQIYTNIRNFKQDLQKHQPNFMIGVPRLWESIYEGIQKQLREQPQKRQKLVKTC 302
Query: 147 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 206
+ IS +Y +RI +G L + S D L A I L PLH +A++LVY+KI
Sbjct: 303 LEISESYILARRIAQGLSLEHLEANWS------DRLKAGIKATALAPLHQIADRLVYRKI 356
Query: 207 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 265
++ +G + + +SGGGSL MH++ FYE +G+ + VGYGLTE+SPV AR+ N+ GS G
Sbjct: 357 RNGVGGNLRFLISGGGSLAMHLENFYEVVGIPILVGYGLTETSPVTNARQIEHNLRGSAG 416
Query: 266 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 325
P+ TEI+IVD ET + LP +G+V +RG QVMQGY+ P AT +A+D GW +TGDI
Sbjct: 417 KPLPETEIRIVDLETKQDLPKKKRGLVLLRGPQVMQGYYHQPEATAKAIDASGWFDTGDI 476
Query: 326 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 385
GW+ C LVL GRAKDTIVL+ GEN+EP +E+A LRS I QI+++GQ
Sbjct: 477 GWLT----------CDQDLVLTGRAKDTIVLTNGENIEPQPIEDACLRSPYIEQIMLVGQ 526
Query: 386 DQRRPGAIIVPDKEEV----LMAAKRLSIVHADASELSKEKTISLLYGELRKWTS----- 436
DQR GA+IVP+ E + + + L L+ T L EL +
Sbjct: 527 DQRALGALIVPNLEALQQWAIASGLNLDFSTPGTQALNDAATQELFRRELNREVQNRPGY 586
Query: 437 KCSFQIGPIHVVDEPFTVN 455
+ +IG V EPF+++
Sbjct: 587 RSDDRIGAFAFVLEPFSLD 605
>gi|440754872|ref|ZP_20934074.1| AMP-binding enzyme family protein [Microcystis aeruginosa TAIHU98]
gi|440175078|gb|ELP54447.1| AMP-binding enzyme family protein [Microcystis aeruginosa TAIHU98]
Length = 639
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/451 (44%), Positives = 279/451 (61%), Gaps = 33/451 (7%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 80
T +D+AT +YTSGTTG PKGVML+H NLLHQ+R+L I + GD+ LS+LP WH YE
Sbjct: 175 TKSENDLATLIYTSGTTGQPKGVMLSHGNLLHQVRNLNAIFQPDPGDRVLSILPSWHSYE 234
Query: 81 RACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
R+C YF ++G +YT++R K DL+++ P M+ VP ++E+LY GIQKQ SA ++
Sbjct: 235 RSCEYFSLAQGCTQIYTSIRTFKQDLKQFSPQLMVGVPRLWESLYEGIQKQFSEQSATKQ 294
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+ R L+ S Y KRI + L + I+ L ARI +L+PLH + +K
Sbjct: 295 KLVRFLLEKSENYVIAKRIADNLSLDHLH------ASGIERLKARIQSLLLYPLHAIGDK 348
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LVY KI+ A+G K VSGGGSL H+D FYE G+ + VGYGLTE+SPV RR N
Sbjct: 349 LVYGKIRQAVGNKVKILVSGGGSLARHLDTFYEIAGIPILVGYGLTETSPVATVRRIDHN 408
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
+ GS G P+ TEI IVD + EVLP G+V +RG QVMQGY+K P AT++A+ DGW
Sbjct: 409 LRGSAGRPVFQTEICIVDLHSKEVLPTEKHGLVLIRGPQVMQGYYKKPEATEKAISPDGW 468
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
++GDIGW+ G LVL GRAKDTIVLS GEN+EP +E+A LRS I Q
Sbjct: 469 FDSGDIGWLT----------AAGDLVLTGRAKDTIVLSNGENIEPQPIEDACLRSPFISQ 518
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAA--KRLSI----VHAD-----ASELSKEKTISLLY 428
I+++GQDQ+ GA+IVP+ + + A ++LS+ H+D +S+L +K + L
Sbjct: 519 IMLVGQDQKALGALIVPNLDILANWAQEQKLSLNLPDPHSDRSTILSSDLYSKKVLDLYQ 578
Query: 429 GELRKWTS-----KCSFQIGPIHVVDEPFTV 454
EL++ + QI ++ EPF++
Sbjct: 579 QELKREVRNRPGYRTDDQIKTFELILEPFSL 609
>gi|119510427|ref|ZP_01629561.1| hypothetical protein N9414_18935 [Nodularia spumigena CCY9414]
gi|119464956|gb|EAW45859.1| hypothetical protein N9414_18935 [Nodularia spumigena CCY9414]
Length = 658
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/446 (43%), Positives = 285/446 (63%), Gaps = 32/446 (7%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
D +AT +YTSGTTG PKGVML+H NLLHQ+++L +V + GD LS+LP WH YER+
Sbjct: 199 DSLATLIYTSGTTGKPKGVMLSHNNLLHQVKTLGTVVQPQPGDVILSILPSWHSYERSGE 258
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
YF+ S+G +YT +R++K DL++++PHYMI+VP ++E+++ G+ KQ A ++ +
Sbjct: 259 YFLLSQGCTQVYTNLRSVKQDLKKFKPHYMIAVPRLWESIHEGVLKQFREQPANKQRLIN 318
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
L+ +S Y +RI +G L N S L + ++I+ +L P H L E+LVY
Sbjct: 319 FLLGMSETYIQKQRIAQGLSL--NHLHASSL----EKFASKIVALVLLPFHALGERLVYA 372
Query: 205 KIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ A+G K ++GGG+LP HID F+E I V++ GYGLTE+SPV ARRP NV GS
Sbjct: 373 KVREAVGGRMKHVITGGGALPRHIDTFFEIISVEILQGYGLTETSPVTNARRPWHNVRGS 432
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
G PI TE+KIVD ET LP G +G+V ++G Q+MQGY++NP AT + +D +GW N+G
Sbjct: 433 SGQPIAGTEVKIVDPETKVPLPLGERGLVLLKGPQIMQGYYQNPEATAKVIDAEGWFNSG 492
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+GW+ P + LVL GRAKDTIVL+ GEN+EP +E+A LRS + QI+++
Sbjct: 493 DLGWVTPEND----------LVLTGRAKDTIVLTNGENIEPQPIEDACLRSPYVDQIMLV 542
Query: 384 GQDQRRPGAIIVPDKEEVLMAAK----RLSIVHADASELS-----KEKTISLLY-GELRK 433
GQDQR GA+IVP+ E + A +L ++ ++ E+S + K I L+ EL +
Sbjct: 543 GQDQRSIGALIVPNTEALKTWASSQNLQLPLLQENSPEISTSIDLESKMIQDLFRQELNR 602
Query: 434 WTS-----KCSFQIGPIHVVDEPFTV 454
+ ++GP ++ EPF++
Sbjct: 603 EVQNRPGYRADDRVGPFRLILEPFSM 628
>gi|428769075|ref|YP_007160865.1| long-chain-fatty-acid--CoA ligase [Cyanobacterium aponinum PCC
10605]
gi|428683354|gb|AFZ52821.1| Long-chain-fatty-acid--CoA ligase [Cyanobacterium aponinum PCC
10605]
Length = 642
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/460 (43%), Positives = 287/460 (62%), Gaps = 33/460 (7%)
Query: 13 AGKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM 72
A + + + + D +AT +YTSGTTG PKGVML+H+NLLHQ+ L I+ + GD+ LS+
Sbjct: 170 AQRPFIFVPVEKDTLATLIYTSGTTGKPKGVMLSHRNLLHQVCHLDVILQPKKGDRILSI 229
Query: 73 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
LP WH YERA YF+ SRG L+YT +R K DL++ +PH+MI VP ++E++Y G+QKQ
Sbjct: 230 LPSWHSYERAAEYFLLSRGTTLIYTNIRYFKQDLKKIKPHHMIGVPRLWESIYEGVQKQF 289
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
S ++ + + S Y KRI G L PS L A+I +L
Sbjct: 290 RDGSKTQQKLVNFFLATSEKYIKAKRIKNGLDL--EHLNPSSGQKLT----AKITSTLLL 343
Query: 193 PLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
P+H L +KL+Y K++ +G + VSGGGSL HID F++ +G+ + VGYGLTE+SPV
Sbjct: 344 PVHKLGDKLIYTKVREGVGGCIQTWVSGGGSLAKHIDNFFQIVGIPLIVGYGLTETSPVT 403
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 311
ARR + N++G+ G PI TEIKIV+ ET E LP G KG+V +RG+QVMQGY+KNP AT
Sbjct: 404 NARRISRNIVGASGQPIPETEIKIVNPETRETLPQGEKGLVFIRGTQVMQGYYKNPEATT 463
Query: 312 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 371
+A+DE+GW ++GD+GW+ P + LV+ GRAKDTIVLS GEN+EP LE+A
Sbjct: 464 KAIDEEGWFDSGDLGWVTPDND----------LVITGRAKDTIVLSNGENIEPQPLEDAC 513
Query: 372 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR------LSIVHADASELSKEK--- 422
+RS I QI+V+GQDQ+ GA+IVP+ E + + L V A+ +E+ K
Sbjct: 514 VRSPYIDQIMVVGQDQKYLGALIVPNLEALQKWGEEQNRILNLPSVGANRAEIEKSDLYS 573
Query: 423 --TISLLYGEL-RKWTSKCSFQIGP----IHVVDEPFTVN 455
+SL EL R+ ++ ++I ++ EPF+++
Sbjct: 574 SGVLSLYKQELAREVKNRPGYRIDDRISVFELILEPFSID 613
>gi|56750633|ref|YP_171334.1| long-chain-fatty-acid CoA ligase [Synechococcus elongatus PCC 6301]
gi|56685592|dbj|BAD78814.1| long-chain-fatty-acid CoA ligase [Synechococcus elongatus PCC 6301]
Length = 649
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/433 (43%), Positives = 276/433 (63%), Gaps = 18/433 (4%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
D +AT +YTSGTTG PKGVML+H NLLHQ+ +L +V + GD LS+LP WH YERAC
Sbjct: 202 DRLATLIYTSGTTGRPKGVMLSHGNLLHQVTTLGVVVQPQPGDTVLSILPTWHSYERACE 261
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
YF+ S+G +YT +RN+K D+++Y+P +M+SVP ++E++Y G+QKQ A +R +
Sbjct: 262 YFLLSQGCTQVYTTLRNVKQDIRQYRPQFMVSVPRLWESIYEGVQKQFREQPAKKRRLID 321
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
+S Y +R ++G L + P+ +A R++ L PLH L ++LVY
Sbjct: 322 TFFGLSQRYVLARRRWQGLDLLALNQSPAQRLA----EGVRMLA--LAPLHKLGDRLVYG 375
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ A G + +SGGGSL +H+D F+E +GV + VGYGLTE+SPV+ RRP N+ GS
Sbjct: 376 KVREATGGRIRQVISGGGSLALHLDTFFEIVGVDLLVGYGLTETSPVLTGRRPWHNLRGS 435
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
G PI T I+IVD ET E P+G +G+V +G Q+MQGYF P AT +A+D +GW +TG
Sbjct: 436 AGQPIPGTAIRIVDPETKENRPSGDRGLVLAKGPQIMQGYFNKPEATAKAIDAEGWFDTG 495
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+G+I G LVL GRAKDTIVL+ GEN+EP +E+A LRSS I QI+++
Sbjct: 496 DLGYIVGE----------GNLVLTGRAKDTIVLTNGENIEPQPIEDACLRSSYISQIMLV 545
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTS-KCSFQI 442
GQD++ GA+IVP++E + + A I D + ++ L E+R + +I
Sbjct: 546 GQDRKSLGALIVPNQEAIALWASEQGISQTDLQGVVQKLIREELNREVRDRPGYRIDDRI 605
Query: 443 GPIHVVDEPFTVN 455
GP +++EPF++
Sbjct: 606 GPFRLIEEPFSME 618
>gi|425438549|ref|ZP_18818893.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9717]
gi|389718106|emb|CCH97904.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9717]
Length = 639
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/450 (44%), Positives = 279/450 (62%), Gaps = 33/450 (7%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 80
T +D+AT +YTSGTTG PKGVML+H NLLHQ+R L I + GD+ LS+LP WH YE
Sbjct: 175 TKSENDLATLIYTSGTTGQPKGVMLSHGNLLHQVRHLNAIFQPDPGDRVLSILPSWHSYE 234
Query: 81 RACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
R+C YF ++G +YT++R K DL+++ P M+ VP ++E+LY GIQKQ A ++
Sbjct: 235 RSCEYFSLAQGCTQIYTSIRTFKQDLKQFSPQLMVGVPRLWESLYEGIQKQFSEQPATKQ 294
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+ R L+ S Y KRI + L + I+ L ARI +L+PLH + +K
Sbjct: 295 KLVRFLLEKSEKYVIAKRIADNLSLDHLH------ASGIERLKARIQSLLLYPLHAIGDK 348
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LVY KI+ A+G K VSGGGSL H+D FYE G+ + VGYGLTE+SPV RR N
Sbjct: 349 LVYGKIRQAVGNKVKILVSGGGSLARHLDTFYEIAGIPILVGYGLTETSPVATVRRIDHN 408
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
+ GS G P+ TEI IVD + EVLP G+V +RG QVMQGY+K P AT++A+ DGW
Sbjct: 409 LRGSAGRPVFQTEICIVDLHSKEVLPTEKHGLVLIRGPQVMQGYYKKPEATEKAISPDGW 468
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
++GDIGW+ G LVL GRAKDTIVLS GEN+EP +E+A LRS I Q
Sbjct: 469 FDSGDIGWLT----------AAGDLVLTGRAKDTIVLSNGENIEPQPIEDACLRSPFISQ 518
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAA--KRLSI----VHAD-----ASELSKEKTISLLY 428
I+++GQDQ+ GA+IVP+ + + A ++LS+ +H+D +S+L +K ++L
Sbjct: 519 IMLVGQDQKALGALIVPNLDILANWAQEQKLSLNLPDLHSDRSMILSSDLYSKKVLALYQ 578
Query: 429 GELRKW-----TSKCSFQIGPIHVVDEPFT 453
EL++ + + QI ++ EPF+
Sbjct: 579 QELKREVRNRPSYRADDQIKTFELILEPFS 608
>gi|428780585|ref|YP_007172371.1| AMP-forming long-chain acyl-CoA synthetase [Dactylococcopsis salina
PCC 8305]
gi|428694864|gb|AFZ51014.1| AMP-forming long-chain acyl-CoA synthetase [Dactylococcopsis salina
PCC 8305]
Length = 636
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/376 (49%), Positives = 251/376 (66%), Gaps = 17/376 (4%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+D+AT +YTSGTTG PKG ML+H N LHQ+R+L D++ + GD+ LS+LP WH YERA
Sbjct: 181 NDLATLIYTSGTTGKPKGAMLSHGNFLHQVRTLGDVIQPQAGDRVLSILPSWHAYERAAE 240
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
YF+ +RG ++ YT +R K DL+ +P+YM+ VP ++E++Y GIQK + + ++ +
Sbjct: 241 YFLLARGCQITYTNLRAFKKDLKEQKPNYMVGVPRLWESVYDGIQKTLNQQTGTKKKLVN 300
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
+ IS Y KRI E CL ++ ++ + L A + ++L PLH L +K+VY
Sbjct: 301 FFLNISDRYIKAKRINERLCLE------NFNPSVTEKLTASVQQSLLEPLHNLGDKVVYN 354
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
++ A G + KA +SGGGSL +ID FYE +G+ + VGYGLTE+SPV ARR N+ GS
Sbjct: 355 TVREATGGNLKAVISGGGSLAKYIDDFYEVVGIPLLVGYGLTETSPVTHARRLYHNLRGS 414
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
G I TE KIVD ET L G KG+V +RG+QVMQGY+K P AT +A+D++GW NTG
Sbjct: 415 AGQAIPETETKIVDPETKASLNDGEKGLVMIRGTQVMQGYYKQPEATAKAIDQEGWFNTG 474
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+GWI P G LVL GRAKDTIVLS GEN+EP LE+A LRS I QI+V+
Sbjct: 475 DLGWITPT----------GDLVLTGRAKDTIVLSNGENIEPQPLEDACLRSVYIDQIIVL 524
Query: 384 GQDQRRPGAIIVPDKE 399
GQDQR GA+IVP+ E
Sbjct: 525 GQDQRCLGALIVPNVE 540
>gi|414079435|ref|YP_007000859.1| AMP-dependent synthetase and ligase [Anabaena sp. 90]
gi|413972714|gb|AFW96802.1| AMP-dependent synthetase and ligase [Anabaena sp. 90]
Length = 654
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/439 (44%), Positives = 288/439 (65%), Gaps = 28/439 (6%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 83
S+ +AT +YTSGTTG PKGVML+HKNLLHQ++SL +V + GD LS+LP WH YER+
Sbjct: 206 SESLATLIYTSGTTGKPKGVMLSHKNLLHQVKSLGVVVQPKKGDTVLSILPTWHSYERSG 265
Query: 84 GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
YF+ S+G +YT +R++K DL++++P+YMI+VP ++E++Y G+QKQ A ++ +
Sbjct: 266 EYFLLSQGCTQIYTNLRSVKGDLKKFKPNYMIAVPRLWESIYEGVQKQFREQPAKKQSLV 325
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
+ L+ S Y +RI +G L N S+ I+ A+I L H L EKLVY
Sbjct: 326 KFLLETSQKYIEARRICQGLSL--NHIHASF----IERSQAKITELGLLLFHALGEKLVY 379
Query: 204 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K++ A G + K +SGGG+LP +ID F+E +GV++ GYGLTE+SPV ARRP N+ G
Sbjct: 380 TKVREATGGNIKHVISGGGALPAYIDNFFEIVGVEILQGYGLTETSPVTNARRPWRNLRG 439
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S G PI TE+KIV+ ET + LP G +G+V ++G Q+MQGY++NP AT +A+D +GW ++
Sbjct: 440 SSGQPIPGTEVKIVNPETRQPLPVGERGLVLLKGPQIMQGYYQNPEATTKAIDTEGWFDS 499
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD+GW+ P + LVL GRAKDTIVL+ GEN+EP +E+A LRS I QI++
Sbjct: 500 GDLGWVTPEND----------LVLTGRAKDTIVLTNGENIEPQPIEDACLRSPYIDQIML 549
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI--SLLYGEL-RKWTSKCS 439
+GQDQR GA+IVP+ L A ++ + ++ ++ E I L EL R+ ++ S
Sbjct: 550 VGQDQRSIGALIVPN----LEALEKWAETQNNSQKIDLESKIVQDLFRQELNREVQNRPS 605
Query: 440 F----QIGPIHVVDEPFTV 454
+ ++GP +++E F++
Sbjct: 606 YRADDRVGPFKLIEEEFSI 624
>gi|434387011|ref|YP_007097622.1| AMP-forming long-chain acyl-CoA synthetase [Chamaesiphon minutus
PCC 6605]
gi|428018001|gb|AFY94095.1| AMP-forming long-chain acyl-CoA synthetase [Chamaesiphon minutus
PCC 6605]
Length = 665
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/468 (42%), Positives = 283/468 (60%), Gaps = 50/468 (10%)
Query: 16 HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPP 75
++ TI D+AT +YTSGT+GNPKGVMLTH NLLHQI + ++PA G + LS+LP
Sbjct: 189 QFQPATIAKTDLATLIYTSGTSGNPKGVMLTHANLLHQINTCGTVIPATPGSRVLSILPS 248
Query: 76 WHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 135
WH YER+C Y++ S+G YT +R K DL+ YQP Y+++VP + E++Y GIQKQ
Sbjct: 249 WHSYERSCEYYLLSQGCTQTYTNIRYFKQDLKEYQPEYLVAVPRLSESIYEGIQKQFREQ 308
Query: 136 SAARRVVARALIRISFAYTAFKRIYEGFCL-----TRNQKQPSYLVALIDWLWARIICAI 190
++ + L+ +S Y +RI +G L T QK L AR+ AI
Sbjct: 309 PPNKQKLVARLLALSTKYIEARRIVQGLSLECLNPTLGQK-----------LIARLQMAI 357
Query: 191 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
L P+H +A+KL+Y KI++A G + +SGGGSL H+DLF+E IGV + VGYGLTE++P
Sbjct: 358 LAPIHAIADKLIYSKIRAATGGKIRYIISGGGSLAKHLDLFFEIIGVNILVGYGLTETAP 417
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
+ RRP N+ S G P+ TEI+IVD +T + + G KG+V +RG QVMQGY+++P A
Sbjct: 418 ITNVRRPWQNLRLSSGQPLPGTEIRIVDVDTRQPVAIGQKGLVMIRGPQVMQGYYRDPEA 477
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T +A+D DGW N+GD+G + P++ L + GRAKDTIVLS GEN+EP +E+
Sbjct: 478 TAKAIDVDGWFNSGDLGMLTPNND----------LTITGRAKDTIVLSNGENIEPTPIED 527
Query: 370 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV--------LMAAKRLSIVHADASE---- 417
A LRSS I QIV++GQDQ+ GA+IVP+ E + L+ A + A ++E
Sbjct: 528 ACLRSSYISQIVLVGQDQKALGALIVPNSEALHQWAISQNLIPAPIAATNPASSNEPNIL 587
Query: 418 ------LSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 454
L+ + I L EL + + +I I ++ EPF++
Sbjct: 588 LDNPQILNNTQVIDLFRDELNREVKNRPGYRIDDRIATIKLIAEPFSI 635
>gi|86609627|ref|YP_478389.1| long-chain-fatty-acid-CoA ligase [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86558169|gb|ABD03126.1| putative long-chain-fatty-acid-CoA ligase [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 628
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/450 (42%), Positives = 279/450 (62%), Gaps = 24/450 (5%)
Query: 14 GKHYKYE--TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLS 71
G+ + Y+ + +AT +YTSGT+G PKGVML+H NL+HQ+ +L +V + G+K L+
Sbjct: 164 GREHTYQPPKLERSQLATIIYTSGTSGRPKGVMLSHGNLMHQVENLGVVVQPQPGNKVLT 223
Query: 72 MLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
+LP WH YERAC YF+ SR L+YT+ R +K D Q+ PH++++VP ++ET+Y GIQ+Q
Sbjct: 224 ILPTWHSYERACEYFLLSRACMLVYTSPRFIKQDFQQEHPHFLVAVPRIWETVYEGIQRQ 283
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
S + + RAL+ +S ++ RI RNQ Y V+ L AR+ +L
Sbjct: 284 FKEKSPLMQRLIRALMAVSESHVLSGRI------ARNQSILHYGVSPWVRLQARLQHWLL 337
Query: 192 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
WPLH LA+ L+Y+K++ A+G + + +SGGGSLP ++DLFYE +G+ + GYGLTE+SPV
Sbjct: 338 WPLHRLADALIYRKVRQALGPNFQHAISGGGSLPAYLDLFYEVVGISILNGYGLTETSPV 397
Query: 251 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSAT 310
+ ARRP NV G+ G P+ TE +IVD ET + LP KG++ RG QVM GY+ NP AT
Sbjct: 398 LCARRPDNNVRGTAGPPLPGTEFRIVDPETRQPLPPREKGLILARGPQVMMGYYNNPEAT 457
Query: 311 KQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA 370
+ L DGW TGD+GW+ P G LV+ GRAKD IVL GEN+EP LE+A
Sbjct: 458 AKVLSSDGWFETGDLGWLTPD----------GQLVITGRAKDVIVLLNGENIEPQPLEDA 507
Query: 371 ALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
L+S I QIV++GQDQ++ A+I P+ + + A I DA L++ +T +L+ E
Sbjct: 508 CLQSPYISQIVIVGQDQKKLAALIYPNLDALKAWAAEQGIPAEDAELLAQPQTRTLILQE 567
Query: 431 LRKWTS-----KCSFQIGPIHVVDEPFTVN 455
+R+ + Q+ + EP +V
Sbjct: 568 VRRRIQERPGYRPDEQVSDFRFLPEPLSVE 597
>gi|425437694|ref|ZP_18818109.1| Genome sequencing data, contig C328 [Microcystis aeruginosa PCC
9432]
gi|389677326|emb|CCH93752.1| Genome sequencing data, contig C328 [Microcystis aeruginosa PCC
9432]
Length = 639
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/451 (44%), Positives = 278/451 (61%), Gaps = 33/451 (7%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 80
T G +D+AT +YTSGTTG PKGVML+H NLLHQ+R+L I + GD+ LS+LP WH YE
Sbjct: 175 TKGENDLATLIYTSGTTGQPKGVMLSHGNLLHQVRNLNAIFQPDPGDRVLSILPSWHSYE 234
Query: 81 RACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
R+C YF ++G +YT++R K DL+++ P M+ VP ++E+LY GIQKQ A ++
Sbjct: 235 RSCEYFSLAQGCTQIYTSIRTFKQDLKQFSPQLMVGVPRLWESLYEGIQKQFSQQPAKKQ 294
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+ + + S Y KRI + L + I+ L ARI +L+PLH + +K
Sbjct: 295 KLVQFFLEKSEKYVIAKRIADNLSLDHLH------ASGIERLKARIQSLLLYPLHAIGDK 348
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LVY KI+ A+G K VSGGGSL H+D FYE G+ + VGYGLTE+SPV RR N
Sbjct: 349 LVYGKIRQAVGNKVKILVSGGGSLARHLDTFYEIAGIPILVGYGLTETSPVATVRRIDHN 408
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
+ GS G P+ TEI IVD + EVLP G+V +RG QVMQGY+K P AT++A+ DGW
Sbjct: 409 LRGSAGRPVFQTEICIVDLHSKEVLPTEKHGLVLIRGPQVMQGYYKKPEATEKAISPDGW 468
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
++GDIGW+ G LVL GRAKDTIVLS GEN+EP +E+A LRS I Q
Sbjct: 469 FDSGDIGWLT----------AAGDLVLTGRAKDTIVLSNGENIEPQPIEDACLRSPFISQ 518
Query: 380 IVVIGQDQRRPGAIIVPDKEEVL--MAAKRLSI----VHAD-----ASELSKEKTISLLY 428
I+++GQDQ+ GA+IVP+ + + + ++LS+ H+D +S+L +K + L
Sbjct: 519 IMLVGQDQKALGALIVPNLDILANWVQEQKLSLNLPDPHSDRSTILSSDLYSKKVLDLYQ 578
Query: 429 GELRKWTS-----KCSFQIGPIHVVDEPFTV 454
EL++ + QI ++ EPF++
Sbjct: 579 QELKREVRNRPGYRTDDQIKTFELILEPFSL 609
>gi|334117580|ref|ZP_08491671.1| Long-chain-fatty-acid--CoA ligase [Microcoleus vaginatus FGP-2]
gi|333460689|gb|EGK89297.1| Long-chain-fatty-acid--CoA ligase [Microcoleus vaginatus FGP-2]
Length = 649
Score = 370 bits (949), Expect = e-99, Method: Compositional matrix adjust.
Identities = 198/436 (45%), Positives = 269/436 (61%), Gaps = 27/436 (6%)
Query: 27 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 86
+AT +YTSGTTG PKGVMLTH NLLHQ+ +L I+ E G+ LS+LP WH YER+ YF
Sbjct: 205 LATLLYTSGTTGKPKGVMLTHGNLLHQLTTLGTILQPEAGESALSILPSWHAYERSVEYF 264
Query: 87 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 146
+ S+G +YT +R K D + Y+P YM+SVP ++E++Y +QKQ ++ + L
Sbjct: 265 LLSQGCTQIYTNIRYFKQDFKTYKPQYMVSVPRIWESIYEAVQKQFREQPPNKQKLVDFL 324
Query: 147 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 206
+ S Y +RI +G L+ S + L AR +L P+H LAEKLVY+K+
Sbjct: 325 LSASQQYIETRRICQGLTLSLKPASGS------EKLIARTKSILLSPVHALAEKLVYQKV 378
Query: 207 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 265
+ A G K +SGGGSL HID F+E + + VGYGLTE+SPV+ RRP N+ GS G
Sbjct: 379 REATGGRLKWAISGGGSLAAHIDNFFEIANIGLLVGYGLTETSPVLTVRRPWHNLKGSAG 438
Query: 266 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 325
P+ HTEIKIVD ET + LP G +G+V RG Q+MQGY+ NP AT +A+D +GW +TGD+
Sbjct: 439 QPLAHTEIKIVDPETRQQLPTGQRGLVLARGPQIMQGYYLNPQATAKAIDPEGWFDTGDL 498
Query: 326 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 385
GW+ P G L+L GRAKDTIVLS GEN+EP +E+A LRS I QI+++GQ
Sbjct: 499 GWLTP----------GNDLILTGRAKDTIVLSNGENIEPQPIEDACLRSPYIDQIMLVGQ 548
Query: 386 DQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS-KEKTISLLY-GELRKWTS-----KC 438
DQR GA+IVP+ E V K + E+ KTI L+ EL + +
Sbjct: 549 DQRSVGALIVPNAEAV---QKWAETQNPPLHEIDWNSKTIQDLFRKELNREVQNRPGYRA 605
Query: 439 SFQIGPIHVVDEPFTV 454
+IGP ++ EPF++
Sbjct: 606 DDRIGPFRLIQEPFSM 621
>gi|428224633|ref|YP_007108730.1| AMP-dependent synthetase and ligase [Geitlerinema sp. PCC 7407]
gi|427984534|gb|AFY65678.1| AMP-dependent synthetase and ligase [Geitlerinema sp. PCC 7407]
Length = 655
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 194/439 (44%), Positives = 281/439 (64%), Gaps = 24/439 (5%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
D +AT +YTSGTTG PKGVMLTH NLLHQI +L +V + GD+ L++LP WH + R
Sbjct: 205 DVLATLIYTSGTTGKPKGVMLTHGNLLHQITTLGVVVQPKPGDRVLTLLPTWHSFGRVGE 264
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
YF+ ++G +YT++R++K D ++++P +M+ VP ++E++Y G+QKQ +R+ +
Sbjct: 265 YFLLAQGCTQIYTSIRHVKADFRKHKPQFMVGVPRLWESIYEGVQKQFREQPESRQKLIN 324
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
L+ S Y KR+ +G L+ +QP L I A + A WPLH L E+LVY+
Sbjct: 325 TLLDFSRQYVEAKRVAQGLLLS--AEQPGGLAKAI----ASLKAAAFWPLHQLGERLVYR 378
Query: 205 KIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ A G V SGGGSL MH+++F+E +GV V VGYGLTE+SPV++ARR N+ GS
Sbjct: 379 KVREATGGELTCVISGGGSLAMHLEMFFEIVGVDVLVGYGLTETSPVLSARRSWHNLRGS 438
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
G PI T +KIVD ET + L G +G+V +G Q+M GYF+NP+AT +A+D +GW +TG
Sbjct: 439 SGRPIPGTALKIVDPETRQPLAFGDRGLVLAQGPQIMGGYFRNPTATAKAIDPEGWFDTG 498
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+GW+ P++ LVL GRAKDTIVL+ GEN+EP +E+A LRS+ I QI+++
Sbjct: 499 DLGWMTPNYD----------LVLTGRAKDTIVLTNGENIEPQPIEDACLRSAYIDQIMLV 548
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHA-DAS-ELSKEKTISLLYGELRKWTS----- 436
GQDQ+ GA+IVP+ E + A I + DAS +L K L+ EL +
Sbjct: 549 GQDQKSLGALIVPNLEALQQWALGAGITSSPDASPDLQHPKVQELIRQELNREVRDRPGY 608
Query: 437 KCSFQIGPIHVVDEPFTVN 455
+ +IGP ++ EPF+V
Sbjct: 609 RPDDRIGPFRLMAEPFSVE 627
>gi|126659901|ref|ZP_01731025.1| long-chain-fatty-acid CoA ligase [Cyanothece sp. CCY0110]
gi|126618765|gb|EAZ89510.1| long-chain-fatty-acid CoA ligase [Cyanothece sp. CCY0110]
Length = 638
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 199/454 (43%), Positives = 278/454 (61%), Gaps = 39/454 (8%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 80
T DD+AT +YTSGTTG PKG ML+H NLLHQ+R+L ++ + GDK LS+LP WH YE
Sbjct: 174 TKDEDDLATLIYTSGTTGQPKGAMLSHGNLLHQVRNLNAVIQPQPGDKVLSILPSWHAYE 233
Query: 81 RACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
R+ YF+ S+G L+YT +RN K DL++++PH+M+ VP ++++LY GIQKQ S ++
Sbjct: 234 RSGEYFLLSQGCTLIYTNIRNFKTDLKKFKPHHMVGVPRLWDSLYEGIQKQFREQSPTQQ 293
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+ IS + +RI L + + I+ AR+ ++L PLH L +K
Sbjct: 294 KIVEFFFNISRTFILSRRIANNMSLEH------FDASAIERSIARLKASLLAPLHSLGDK 347
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LVYKKI+ +G + + VSGGGSL H+D FYE I V V VGYGLTE++PV AR + N
Sbjct: 348 LVYKKIREGLGGNFETLVSGGGSLAKHLDDFYEIINVPVLVGYGLTETAPVTNARTHSHN 407
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
+ GS G PI TEIKIVD +T E L G KG+V +RG Q+MQGY+K P AT +A++ +GW
Sbjct: 408 LRGSSGQPIPKTEIKIVDLDTREPLSQGKKGVVLLRGPQIMQGYYKKPEATAKAINPEGW 467
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
++GD+GWI P + LV+ GRAKDTIVLS GEN+EP +E+A +RS I Q
Sbjct: 468 FDSGDLGWITPMND----------LVITGRAKDTIVLSNGENIEPQPIEDACIRSPYIDQ 517
Query: 380 IVVIGQDQRRPGAIIVP--------DKEEVLM------AAKRLSIVHADASELSKEKTIS 425
++++GQDQ+ GA+IVP DK + L A R +IV++D L +
Sbjct: 518 MMLVGQDQKALGALIVPNLDALQTWDKNQQLNLTFPPEDASREAIVNSD---LYGKPVQD 574
Query: 426 LLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 454
L EL + + QI ++ EPF+V
Sbjct: 575 LFKQELNREVKNRPGYRADDQIKAFELILEPFSV 608
>gi|220910327|ref|YP_002485638.1| AMP-dependent synthetase/ligase [Cyanothece sp. PCC 7425]
gi|219866938|gb|ACL47277.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 7425]
Length = 684
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 198/446 (44%), Positives = 281/446 (63%), Gaps = 32/446 (7%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+AT +YTSGTTG PKGVML+H NLLHQ+ SL ++ + GD+ LS+LP WH YERAC Y
Sbjct: 227 DLATLIYTSGTTGKPKGVMLSHGNLLHQVTSLGTVIQPQAGDRVLSILPTWHSYERACEY 286
Query: 86 FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARA 145
F+FS G +YT +R++K D++R +P YM++VP ++E++Y G+Q+Q A+++ +
Sbjct: 287 FLFSLGCTQIYTNLRHIKQDIKRVKPQYMVAVPRLWESIYEGVQRQFREQPASKQKLINF 346
Query: 146 LIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKK 205
+ IS Y R+ G L + PS L+ A+I +L PLH L EK+VY+K
Sbjct: 347 FLGISQRYIKASRLRAGLDL--DNLHPSGGQKLL----AQIQVLLLRPLHQLGEKIVYQK 400
Query: 206 IQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 264
++ A G K +SGGGSL H+++FYE IGV++ VGYGLTE+SPV+ ARRP N+ GS
Sbjct: 401 VREATGGCLKQVISGGGSLARHLEVFYEMIGVEILVGYGLTETSPVLTARRPWENLRGSA 460
Query: 265 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 324
G P+ +TEIKIVD E+ L G KG+V RG Q+MQGY+ P AT + LD +GW +TGD
Sbjct: 461 GKPVPYTEIKIVDPESRATLSLGEKGLVMARGPQIMQGYYGKPEATAKVLDSEGWFDTGD 520
Query: 325 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 384
+GW+ LVL GR KDTIVL+ GEN+EP +E+A LRS+ I QI+++G
Sbjct: 521 VGWLTDRQD----------LVLTGRQKDTIVLTNGENIEPQPIEDACLRSAYIDQIMLVG 570
Query: 385 QDQRRPGAIIVPDKE--EVLMAAKRLSIVHADASELSKEKTISL-------LYGEL--RK 433
QDQR GA+IVP+ E E A++ ++ D +K + I L LY + R+
Sbjct: 571 QDQRVLGALIVPNLEALEQWAASQNYALKLPDREPQTKGEMIDLDSKPVQDLYRQELNRE 630
Query: 434 WTSKCSF----QIGPIHVVDEPFTVN 455
++ F +IGP + EPF++
Sbjct: 631 VKNRPGFRIDDRIGPFKFILEPFSIE 656
>gi|86604864|ref|YP_473627.1| long-chain-fatty-acid-CoA ligase-like protein [Synechococcus sp.
JA-3-3Ab]
gi|86553406|gb|ABC98364.1| long-chain-fatty-acid-CoA ligase-like protein [Synechococcus sp.
JA-3-3Ab]
Length = 626
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 194/450 (43%), Positives = 273/450 (60%), Gaps = 24/450 (5%)
Query: 14 GKHYKYET--IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLS 71
G+ +YE + +AT +YTSGT+G PKGVML+H NL+HQ+ +L+ +V GDK L+
Sbjct: 162 GRERRYEPPRLERSQLATIIYTSGTSGRPKGVMLSHGNLMHQVENLHVVVQPRPGDKVLT 221
Query: 72 MLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
+LP WH YERAC YF+ S+ L+YT R +K D Q+ QPHY+++VP ++ET+Y GIQ+Q
Sbjct: 222 ILPTWHSYERACEYFLLSQACTLVYTNPRFIKQDFQQEQPHYLVAVPRIWETVYEGIQRQ 281
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
S + + R L+ S Y RI N+ Y V+ L AR+ +L
Sbjct: 282 FKEKSPLMQRLIRTLMAASEGYVLAGRI------AGNRSILHYGVSPWVRLGARLQQGLL 335
Query: 192 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
WP+H LA+ L+Y+K++ A+G + + +SGGGSLP ++DLFYE +G+ + GYGLTE+SPV
Sbjct: 336 WPVHRLADALIYRKVRQALGPNFQQAISGGGSLPAYLDLFYEVVGISILNGYGLTETSPV 395
Query: 251 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSAT 310
+ ARRP NV G+ G P+ TE +IVD ET + LP G KG++ RG QVM GY+ NP AT
Sbjct: 396 LCARRPDNNVRGTAGPPLPGTEFRIVDPETRQPLPPGEKGLILARGPQVMMGYYNNPEAT 455
Query: 311 KQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA 370
+ L DGW TGD+GW+ P G LV+ GRAKD IVL GENVEP LE+A
Sbjct: 456 AKVLSPDGWFETGDLGWLTPD----------GQLVITGRAKDVIVLLNGENVEPQPLEDA 505
Query: 371 ALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
L+S I QIV++GQDQ++ A+I P+ + + A I A+A L + +L+ E
Sbjct: 506 CLQSPYISQIVIVGQDQKKLAALIYPNLDVLKAWAAEQGIPAAEAELLGHPQVRTLILQE 565
Query: 431 LRKWTS-----KCSFQIGPIHVVDEPFTVN 455
+R + QI + EP +V
Sbjct: 566 VRARIQERPGYRPHEQIADFRFLPEPLSVE 595
>gi|354566187|ref|ZP_08985360.1| Long-chain-fatty-acid--CoA ligase [Fischerella sp. JSC-11]
gi|353546695|gb|EHC16143.1| Long-chain-fatty-acid--CoA ligase [Fischerella sp. JSC-11]
Length = 659
Score = 367 bits (942), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 197/446 (44%), Positives = 278/446 (62%), Gaps = 33/446 (7%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+AT +YTSGTTG PKGVMLTH+NL+HQI ++ +V GD LS+LP WH YER+C Y
Sbjct: 200 DLATLIYTSGTTGKPKGVMLTHRNLMHQIVAIPVVVQPRPGDIVLSILPTWHSYERSCEY 259
Query: 86 FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARA 145
F+ S+G +YT +R++K DL+ YQPHYM++VP + E++Y G QKQ A+R+ +
Sbjct: 260 FLLSQGCTQVYTNLRSIKRDLKEYQPHYMVAVPRLLESIYEGAQKQFREQPASRQRLINF 319
Query: 146 LIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKK 205
I Y +R G L PS + D L A + A L PL+ L EKLVY K
Sbjct: 320 FFEIGEKYIKARRTLTGLNL--ENLNPS----MGDRLTASLQVAALSPLYALGEKLVYSK 373
Query: 206 IQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 264
++ A G K +SGGG+LP H+D F+E +GV++ VGYGLTE+SPV ARR N+ G+
Sbjct: 374 VREATGGRVKQMISGGGALPKHVDDFFEILGVEILVGYGLTETSPVTHARRHWRNLRGAA 433
Query: 265 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 324
G PI TE KIVD ET + LP G +G+V +RG Q+MQGY++NP AT +A+D +GW ++GD
Sbjct: 434 GQPIPGTETKIVDPETKKELPTGERGLVLLRGPQIMQGYYQNPEATAKAIDPEGWFDSGD 493
Query: 325 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 384
+GW+ P + L+L GRAKDTIVL+ GEN+EP +E+A LRS I QI+++G
Sbjct: 494 LGWVTPQND----------LILTGRAKDTIVLTNGENIEPQPIEDACLRSPYIDQIMLVG 543
Query: 385 QDQRRPGAIIVPDKE--EVLMAAKRL-------SIVHADASELSKEKTI--SLLYGELRK 433
QD++ GA+IVP+ E E A+ L ++ A + +++ E I L EL +
Sbjct: 544 QDRKSLGALIVPNLEALEKWAASGNLQLTIEDENVTAATSQKINLESKIIQDLFRQELNR 603
Query: 434 WTS-----KCSFQIGPIHVVDEPFTV 454
+ +IGP ++ EPF++
Sbjct: 604 EVQNRPGYRPDDRIGPFKLILEPFSI 629
>gi|81299727|ref|YP_399935.1| long-chain-fatty-acid CoA ligase [Synechococcus elongatus PCC 7942]
gi|81168608|gb|ABB56948.1| long-chain-fatty-acid CoA ligase [Synechococcus elongatus PCC 7942]
Length = 649
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 189/433 (43%), Positives = 275/433 (63%), Gaps = 18/433 (4%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
D +AT +YTSGTTG PKGVML+H NLLHQ+ +L +V + GD LS+LP WH YERAC
Sbjct: 202 DRLATLIYTSGTTGPPKGVMLSHGNLLHQVTTLGVVVQPQPGDTVLSILPTWHSYERACE 261
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
YF+ S+G +YT +RN+K D+++Y+P +M+SV ++E++Y G+QKQ A +R +
Sbjct: 262 YFLLSQGCTQVYTTLRNVKQDIRQYRPQFMVSVLRLWESIYEGVQKQFREQPAKKRRLID 321
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
+S Y +R ++G L + P+ +A R++ L PLH L ++LVY
Sbjct: 322 TFFGLSQRYVLARRRWQGLDLLALNQSPAQRLA----EGVRMLA--LAPLHKLGDRLVYG 375
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ A G + +SGGGSL +H+D F+E +GV + VGYGLTE+SPV+ RRP N+ GS
Sbjct: 376 KVREATGGRIRQVISGGGSLALHLDTFFEIVGVDLLVGYGLTETSPVLTGRRPWHNLRGS 435
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
G PI T I+IVD ET E P+G +G+V +G Q+MQGYF P AT +A+D +GW +TG
Sbjct: 436 AGQPIPGTAIRIVDPETKENRPSGDRGLVLAKGPQIMQGYFNKPEATAKAIDAEGWFDTG 495
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+G+I G LVL GRAKDTIVL+ GEN+EP +E+A LRSS I QI+++
Sbjct: 496 DLGYIVGE----------GNLVLTGRAKDTIVLTNGENIEPQPIEDACLRSSYISQIMLV 545
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTS-KCSFQI 442
GQD++ GA+IVP++E + + A I D + ++ L E+R + +I
Sbjct: 546 GQDRKSLGALIVPNQEAIALWASEQGISQTDLQGVVQKLIREELNREVRDRPGYRIDDRI 605
Query: 443 GPIHVVDEPFTVN 455
GP +++EPF++
Sbjct: 606 GPFRLIEEPFSME 618
>gi|428774560|ref|YP_007166348.1| AMP-dependent synthetase and ligase [Cyanobacterium stanieri PCC
7202]
gi|428688839|gb|AFZ48699.1| AMP-dependent synthetase and ligase [Cyanobacterium stanieri PCC
7202]
Length = 636
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 191/447 (42%), Positives = 276/447 (61%), Gaps = 35/447 (7%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+AT +YTSGTTG PKGVML+H+NLLHQ+R+L I+ GD+ L++LP WH YERA
Sbjct: 180 DDLATLIYTSGTTGKPKGVMLSHRNLLHQVRNLETIIQPSKGDRILTILPSWHSYERAAE 239
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
YF+ SRG L+YT++R K DL+ Y+P+YM+ VP ++E++Y G+QK F S +++V
Sbjct: 240 YFLLSRGTTLIYTSIRYFKQDLKDYKPNYMVGVPRLWESIYEGVQKN-FRDSGKQKLV-N 297
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
+ +S Y KR G L PS + D + + +P H+L +KLVY
Sbjct: 298 FFLGMSQGYLDGKRAQSGLDL--QNLNPSGM----DKFVGTLKTIVFYPFHILGDKLVYT 351
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ +G S KA +SGGGSL HID F++ + + + VGYGLTE+SPV ARR N++G+
Sbjct: 352 KVREGVGNSIKAWISGGGSLAKHIDNFFQIVNIPLLVGYGLTETSPVTNARRMNRNIVGA 411
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
G P+ TEI I ET LP G KG+V +RG+QVMQGY+K P AT +A++EDGW ++G
Sbjct: 412 SGQPLPETEIMIAHPETKTPLPQGEKGLVFIRGTQVMQGYYKKPEATAKAINEDGWFDSG 471
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+GW+ P + LV+ GRAKDTIVLS GEN+EP LE+ LRS+ + QI+++
Sbjct: 472 DLGWVTPDND----------LVITGRAKDTIVLSNGENIEPQPLEDVCLRSAYVDQIMLV 521
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIV-----------HADASELSKEKTISLLYGELR 432
GQDQ+ GA+IVP+ E + AK + + S+L ++ +SL EL
Sbjct: 522 GQDQKYLGALIVPNLEALSAWAKENKVSLKIPDTGASREEVENSDLYSKEVMSLFKQELN 581
Query: 433 KWTS-----KCSFQIGPIHVVDEPFTV 454
+ + +I ++ EPF++
Sbjct: 582 REVKNRPGYRPDDRIAVFELILEPFSI 608
>gi|434406627|ref|YP_007149512.1| AMP-forming long-chain acyl-CoA synthetase [Cylindrospermum
stagnale PCC 7417]
gi|428260882|gb|AFZ26832.1| AMP-forming long-chain acyl-CoA synthetase [Cylindrospermum
stagnale PCC 7417]
Length = 658
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 195/461 (42%), Positives = 286/461 (62%), Gaps = 34/461 (7%)
Query: 12 IAGKHYKYETIGSDD-IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFL 70
+ KH +DD +AT +YTSGTTG PKGVML+H NLLHQ+++L +V + GDK L
Sbjct: 185 VGAKHNFVPVKQNDDTLATLIYTSGTTGKPKGVMLSHGNLLHQVKALGAVVQPQVGDKVL 244
Query: 71 SMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQK 130
S+LP WH YER+ YF+ S+G E +YT +R++K DL++++P +MI+VP ++E++Y G+QK
Sbjct: 245 SILPSWHSYERSGEYFLLSQGCEQIYTNLRSVKADLKKFKPRFMIAVPRLWESIYEGVQK 304
Query: 131 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 190
Q A ++ + + L+ IS Y RI E L + + L +RI+ +
Sbjct: 305 QFREQPANKQRLIKFLLGISEKYIKAGRIAENLSLEH------LDASTFERLASRILASA 358
Query: 191 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
L+P H L E+LVY K++ A G K +SGGG+LP HID F+E GV++ VGYGLTE+SP
Sbjct: 359 LFPFHALGERLVYAKVREATGGRIKYVISGGGALPKHIDNFFEITGVEILVGYGLTETSP 418
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
V ARRP N G+ G PI TE KIVD E+ + L A +G+V +RG Q+MQGY++NP A
Sbjct: 419 VTHARRPWRNFRGTAGQPIPGTEAKIVDPESRKPLAARERGLVLLRGPQIMQGYYQNPEA 478
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T +A+D +GW ++GD+GW+ P + LVL GRAKDTIVL+ GEN+EP +E+
Sbjct: 479 TAKAIDAEGWFDSGDLGWLTPEND----------LVLTGRAKDTIVLTNGENIEPQPIED 528
Query: 370 AALRSSLIRQIVVIGQDQRRPGAIIVPDKE---------EVLMAAKRLSIVHADASELSK 420
A LRS + QI+++GQDQR GAIIVP+ E + ++ + +I + +++
Sbjct: 529 ACLRSPYVDQIMLVGQDQRCIGAIIVPNIEALEKWAEGQNLTLSIQSENITASPGQKINL 588
Query: 421 EKTI--SLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 454
E TI L EL + + +I ++ EPF++
Sbjct: 589 ESTIIQDLFRQELNREVQNRPGYRADDRINRFKLIVEPFSM 629
>gi|427719825|ref|YP_007067819.1| long-chain-fatty-acid--CoA ligase [Calothrix sp. PCC 7507]
gi|427352261|gb|AFY34985.1| Long-chain-fatty-acid--CoA ligase [Calothrix sp. PCC 7507]
Length = 658
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 195/447 (43%), Positives = 276/447 (61%), Gaps = 33/447 (7%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+D+AT +YTSGTTG PKGVML+H NLLHQ+ +V E GD LS+LP WH YER
Sbjct: 199 EDLATLIYTSGTTGKPKGVMLSHDNLLHQVTVFGVVVQPEVGDTVLSILPSWHSYERTVE 258
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
YF+ S+G +YT +R++K DL+ ++PHYM+ VP ++E++Y G QKQ A ++ +
Sbjct: 259 YFLLSQGCTQVYTNLRSVKKDLREFKPHYMVGVPRLWESIYEGAQKQFREQPAKKQRLIN 318
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
+L+ S Y +RI + L + I+ L ARI + L+PLH L EKLVY
Sbjct: 319 SLLGTSEKYIKAQRIAQKLDLEH------LDASAIEQLTARIQASALFPLHALGEKLVYA 372
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ A G K +SGGG+LP HID F+E IGV++ GYGLTE+SPV RRP+ N++G+
Sbjct: 373 KVREATGGRVKQMISGGGALPKHIDNFFEIIGVQILQGYGLTETSPVTHVRRPSRNLIGA 432
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
G P+ TE KIVD ET LP G +G+V ++G Q+M+GY++NP AT +A+D GW ++G
Sbjct: 433 SGQPLPATETKIVDPETRVPLPTGKRGLVLLKGPQIMEGYYQNPEATAKAIDPQGWFDSG 492
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+GW+ P + LVL GRAKDTIVL+ GEN+EP +E+A LRS + QI+++
Sbjct: 493 DLGWLTPQND----------LVLTGRAKDTIVLTNGENIEPQPIEDACLRSPYVDQIMLV 542
Query: 384 GQDQRRPGAIIVPDKEEVLMAA--KRLSIV-----HADAS----ELSKEKTISLLYGELR 432
GQDQR GA+IVP+ E + A + LSI ADAS +L + L EL
Sbjct: 543 GQDQRSLGALIVPNVEALAKWAETQNLSISIQDDNVADASSQKIDLESKIIQDLFRQELN 602
Query: 433 KWTS-----KCSFQIGPIHVVDEPFTV 454
+ + +I ++ EPF++
Sbjct: 603 REVQNRPGYRADDRISSFRLIPEPFSI 629
>gi|254411063|ref|ZP_05024841.1| AMP-binding enzyme, putative [Coleofasciculus chthonoplastes PCC
7420]
gi|196182418|gb|EDX77404.1| AMP-binding enzyme, putative [Coleofasciculus chthonoplastes PCC
7420]
Length = 655
Score = 364 bits (934), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 197/418 (47%), Positives = 261/418 (62%), Gaps = 21/418 (5%)
Query: 14 GKHYKYETI--GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLS 71
GK++ ++ I D +AT VYTSGTTG PKGVML+H NLLHQ+ SL IV E GD+ LS
Sbjct: 184 GKNHTFQPIEQAPDTLATLVYTSGTTGKPKGVMLSHGNLLHQVTSLGAIVQLEAGDRVLS 243
Query: 72 MLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
+LP WHVYERA YF S+G L+YT +R++K DL P+Y +SVP + E++Y +QKQ
Sbjct: 244 ILPTWHVYERAIEYFALSQGCTLIYTTLRHVKRDLNAQHPNYFVSVPRLLESIYETVQKQ 303
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
+ SA ++ + L IS + +R+ G L +QPS LWAR+ L
Sbjct: 304 LSKESARKQRLVNILFSISDRFIKARRLVHGLSL--EHQQPSGFQR----LWARLQWLTL 357
Query: 192 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
+H+LA++ +Y+KI+ IG + K + GGG+L +D FYE IG++V GYGLTE+SPV
Sbjct: 358 VLIHVLADQFIYQKIREQIGANLKQTICGGGALSQKLDDFYEIIGIEVLEGYGLTETSPV 417
Query: 251 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSAT 310
+ ARR N+ GS G PI TEI+IVD +T E L G KG+V RGSQ+MQGY++NP AT
Sbjct: 418 LTARRSWHNLRGSAGKPILETEIRIVDPDTRETLLQGEKGLVWARGSQIMQGYYRNPEAT 477
Query: 311 KQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA 370
+ +D GW NT D+GW+ LVL GRAKDTIVLS GENVEP +E A
Sbjct: 478 DKVIDAQGWFNTEDLGWLTVQED----------LVLTGRAKDTIVLSNGENVEPKPIENA 527
Query: 371 ALRSSLIRQIVVIGQDQRRPGAIIVP--DKEEVLMAAKRLSIVHADASELSKEKTISL 426
+RS I Q+VV+GQDQR GA+IVP D + A + + D S E+TI L
Sbjct: 528 CMRSRYIDQMVVVGQDQRSLGALIVPNFDNLQGWAAENQYHLQLPDGESASGEETIDL 585
>gi|172036048|ref|YP_001802549.1| long-chain-fatty-acid CoA ligase [Cyanothece sp. ATCC 51142]
gi|354552853|ref|ZP_08972160.1| Long-chain-fatty-acid--CoA ligase [Cyanothece sp. ATCC 51472]
gi|171697502|gb|ACB50483.1| probable long-chain-fatty-acid CoA ligase [Cyanothece sp. ATCC
51142]
gi|353554683|gb|EHC24072.1| Long-chain-fatty-acid--CoA ligase [Cyanothece sp. ATCC 51472]
Length = 638
Score = 364 bits (934), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 195/451 (43%), Positives = 275/451 (60%), Gaps = 33/451 (7%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 80
T DD+AT +YTSGTTG PKG ML+H NLLHQ+++L I+ + GD LS+LP WH YE
Sbjct: 174 TKEDDDLATLIYTSGTTGQPKGAMLSHGNLLHQVKNLDAIIQPKAGDIVLSILPSWHSYE 233
Query: 81 RACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
R+ YF+ S+G L YT +RN K DL++++PH+M+ VP ++++LY GIQKQ+ S ++
Sbjct: 234 RSAEYFLLSQGCTLTYTNIRNFKTDLKKFKPHHMVGVPRLWDSLYEGIQKQLRDQSPTQQ 293
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+ + +S + +RI L + + + AR+ ++L PLH L +K
Sbjct: 294 KIVQFFFNLSQTFILSRRIANNMSLEH------FDASGTERFIARLKASLLAPLHSLGDK 347
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LVY KI+ +G + + VSGGGSL H+D FYE I V V VGYGLTE+SPV AR + N
Sbjct: 348 LVYNKIREGLGGNFETLVSGGGSLAKHLDDFYEIINVPVLVGYGLTETSPVTNARTHSHN 407
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
+ GS G PI TEIKIVD +T E L G KG+V +RG QVMQGY+K P AT +A++ +GW
Sbjct: 408 LRGSSGQPIPKTEIKIVDLDTGEPLSQGKKGVVLIRGPQVMQGYYKKPEATAKAINSEGW 467
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
N+GD+GWI P + LV+ GRAKDTIVLS GEN+EP +E+A +RS+ I Q
Sbjct: 468 FNSGDLGWITPMND----------LVITGRAKDTIVLSNGENIEPQPIEDACVRSAYIDQ 517
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAK----RLSIVHADA-------SELSKEKTISLLY 428
++++GQDQ+ GA+IVP+ + + K L+ DA S+L + L
Sbjct: 518 MMLVGQDQKALGALIVPNLDALQTWGKNQQLNLTFPPEDASREAIVNSDLYGKPVQDLFK 577
Query: 429 GELRKWTS-----KCSFQIGPIHVVDEPFTV 454
EL + + QI ++ EPF+V
Sbjct: 578 QELNREVKNRPGYRADDQIKAFELILEPFSV 608
>gi|67921002|ref|ZP_00514521.1| AMP-dependent synthetase and ligase [Crocosphaera watsonii WH 8501]
gi|416380779|ref|ZP_11684127.1| Long-chain-fatty-acid--CoA ligase [Crocosphaera watsonii WH 0003]
gi|67857119|gb|EAM52359.1| AMP-dependent synthetase and ligase [Crocosphaera watsonii WH 8501]
gi|357265616|gb|EHJ14357.1| Long-chain-fatty-acid--CoA ligase [Crocosphaera watsonii WH 0003]
Length = 638
Score = 363 bits (933), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 192/445 (43%), Positives = 277/445 (62%), Gaps = 33/445 (7%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+AT +YTSGTTG PKG ML+H NLLHQ+++L ++ + GD+ LS+LP WH YER+ Y
Sbjct: 179 DLATLIYTSGTTGQPKGAMLSHGNLLHQVKNLDAVIQPKVGDQVLSILPSWHSYERSAEY 238
Query: 86 FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARA 145
F+ S+G L+YT +RN K D++R++P +M+ VP +++++Y GIQKQ+ S ++ +A+
Sbjct: 239 FLLSQGCTLVYTNIRNFKTDIKRFKPQHMVGVPRLWDSIYEGIQKQLREKSDTQQKIAQF 298
Query: 146 LIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKK 205
IS + +RI + L + + ID A++ L PLH L +KLVY K
Sbjct: 299 FFNISQNFILSRRIADNMSLEH------FDASAIDRFIAKLKTIFLAPLHGLGDKLVYSK 352
Query: 206 IQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 264
I+ +G + + +SGGGSL H+D FYE I V V VGYGLTE+SPV AR + N+ GS
Sbjct: 353 IREGLGGNFETLMSGGGSLAKHLDDFYEIINVPVLVGYGLTETSPVSNARTHSHNLRGSS 412
Query: 265 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 324
G PI HTEIKIVD +T E + G +G+V +RG QVMQGY+K P AT +A+D +GW N+GD
Sbjct: 413 GQPIPHTEIKIVDLDTGEAVSRGKRGVVLIRGPQVMQGYYKKPEATAKAIDPEGWFNSGD 472
Query: 325 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 384
+GWI P + LV+ GRAKDTIVL+ GEN+EP +E+A +RS I Q++++G
Sbjct: 473 LGWITPMND----------LVITGRAKDTIVLNNGENIEPQPIEDACVRSPYIDQMMLVG 522
Query: 385 QDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI--SLLYG---------ELRK 433
QDQ+ GA+IVP+ + + K + SE + +TI S LYG EL++
Sbjct: 523 QDQKALGALIVPNLDALQTWGKNQQLNLTFPSEDASRETIINSDLYGKPVQDLFKQELKR 582
Query: 434 WTS-----KCSFQIGPIHVVDEPFT 453
+ QI ++ EPF+
Sbjct: 583 EVKNRPGYRADDQIKVFELILEPFS 607
>gi|75909380|ref|YP_323676.1| AMP-dependent synthetase and ligase [Anabaena variabilis ATCC
29413]
gi|75703105|gb|ABA22781.1| AMP-dependent synthetase and ligase [Anabaena variabilis ATCC
29413]
Length = 658
Score = 363 bits (933), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 192/447 (42%), Positives = 283/447 (63%), Gaps = 33/447 (7%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
D++AT +YTSGTTG PKGVML++ NLLHQ+ + +V + GD LS+LP WH YER
Sbjct: 199 DELATLIYTSGTTGKPKGVMLSYSNLLHQVTTFRVVVQPKVGDTALSILPSWHSYERTVE 258
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
Y++ S+G +YT +R++K DL++Y+P+YM++VP ++E++Y G+QKQ A ++ + +
Sbjct: 259 YYLLSQGCTQIYTNLRSVKADLKQYKPNYMVAVPRLWESIYEGVQKQFREQPANKQRLIK 318
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
L+ +S Y +RI +G L + S L LI A+++ P H+L +KLVY
Sbjct: 319 FLLGMSEKYIKAQRIAQGTSL--DHLHASSLERLI----AKVLELAFLPFHVLGQKLVYG 372
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ A G K +SGGG+LP HID F+E IGV++ GYGLTE+SPV RRP N +G+
Sbjct: 373 KVKEATGGRFKQVISGGGALPKHIDTFFEIIGVQILQGYGLTETSPVTNVRRPWRNFIGT 432
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
G PI TE+KIVD ET + LP G +G+V ++G QVMQGY++NP AT +A+D GW ++G
Sbjct: 433 SGQPIPGTEVKIVDPETRQPLPVGQRGLVLLKGPQVMQGYYQNPEATAKAIDPQGWFDSG 492
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+GW+ P + LVL GRAKDTIVLS GEN+EP +E+A LRS I QI+++
Sbjct: 493 DLGWVTPDNE----------LVLTGRAKDTIVLSNGENIEPQPIEDACLRSPYIDQIMLV 542
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSI---VHADASELSKEKTISL----LYGELRKWTS 436
GQDQR GA+IVP+ E + A+ ++ V D S + I+L + G R+ +
Sbjct: 543 GQDQRSIGALIVPNVEALAKWAESQNLVLSVEDDNLTSSSSQKINLESKMIQGLFRQELN 602
Query: 437 ---------KCSFQIGPIHVVDEPFTV 454
+ ++GP ++ EPF++
Sbjct: 603 REVQNRPGYRPDDRVGPFKLILEPFSI 629
>gi|428201789|ref|YP_007080378.1| AMP-forming long-chain acyl-CoA synthetase [Pleurocapsa sp. PCC
7327]
gi|427979221|gb|AFY76821.1| AMP-forming long-chain acyl-CoA synthetase [Pleurocapsa sp. PCC
7327]
Length = 638
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 187/389 (48%), Positives = 254/389 (65%), Gaps = 19/389 (4%)
Query: 14 GKHYKYETIGSD--DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLS 71
G+ + I D +AT +YTSGTTG PKGVML+H NLLHQ+ +L ++ E GD+ LS
Sbjct: 165 GESHNLNPIRQDRQTLATLIYTSGTTGKPKGVMLSHGNLLHQVTNLIAVLQPEPGDRVLS 224
Query: 72 MLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
+LP WH YER+ YFI S G +YT +R+ K+DL+R++PHYMI VP ++E+LY +QKQ
Sbjct: 225 ILPSWHCYERSGEYFILSHGCTQIYTNIRSFKNDLKRFKPHYMIGVPRLWESLYEAVQKQ 284
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
+ +++ +A + IS Y KR +G L PS + A+I +L
Sbjct: 285 LREQPESKQRLANFFLGISTRYIMAKRTEQGLNL--ENLNPSG----GERFMAKITANLL 338
Query: 192 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
PLH L ++LVY+KI+ A G + K +SGGG+L MH+D FYE IGV + VGYGLTE+SPV
Sbjct: 339 APLHALGDRLVYQKIRQATGGNVKTLISGGGALAMHLDNFYEIIGVPLVVGYGLTETSPV 398
Query: 251 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSAT 310
AR N+ GS G PI TEI+IVD +T + LP KGIV +RG QVMQGY+K P AT
Sbjct: 399 TNARTLKHNLRGSAGKPIPETEIRIVDPDTRQTLPPTQKGIVLIRGPQVMQGYYKKPEAT 458
Query: 311 KQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA 370
+ +D +GW ++GD+GW+ P + LVL GRAKDTIVLS GEN+EP +E+A
Sbjct: 459 AKVIDAEGWFDSGDLGWVTPAND----------LVLTGRAKDTIVLSNGENIEPQPIEDA 508
Query: 371 ALRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
+RS I QI+++GQDQ+ GA+IVP+ E
Sbjct: 509 CIRSPYIDQIMLVGQDQKALGALIVPNLE 537
>gi|443319050|ref|ZP_21048288.1| AMP-forming long-chain acyl-CoA synthetase [Leptolyngbya sp. PCC
6406]
gi|442781364|gb|ELR91466.1| AMP-forming long-chain acyl-CoA synthetase [Leptolyngbya sp. PCC
6406]
Length = 657
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 198/466 (42%), Positives = 278/466 (59%), Gaps = 43/466 (9%)
Query: 8 LTPVIAGKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGD 67
LTPV H D+AT +YTSGTTG PKGVM+ H+NLLHQI++L ++ GD
Sbjct: 189 LTPVPQTAH---------DLATLIYTSGTTGQPKGVMIRHRNLLHQIQTLGAVIQPAIGD 239
Query: 68 KFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSG 127
+ L +LP WH + R YFI+S+G Y+ +R +K D + +PH+M+ VP ++E++Y G
Sbjct: 240 RVLGLLPTWHTFGRTAEYFIYSQGCTQTYSNIRTIKADFKTVKPHFMVGVPRLWESIYEG 299
Query: 128 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 187
+QKQ +++ + AL+ S Y +R L P + +RI
Sbjct: 300 VQKQFREQPESKQRLVNALLWHSQKYVENRRTANSLALDHPNASP------LRQFGSRIF 353
Query: 188 CAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 246
P HLL EKLVY K++ A G KA +SGGGSL H+DLF+E I V V VGYGLTE
Sbjct: 354 SFAFLPGHLLGEKLVYSKVREATGGCVKALISGGGSLARHLDLFFEIINVPVLVGYGLTE 413
Query: 247 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKN 306
+SPV++ARRP N+ G+ G PI TEI++VD ET++ LP G KG+V RG QVM+GY+KN
Sbjct: 414 TSPVLSARRPWRNLRGASGQPIPGTEIRVVDPETHQPLPLGQKGLVMARGPQVMEGYYKN 473
Query: 307 PSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLE 366
P AT +ALD DGW +TGD+GWI + +VL GRAKDTIVL+ GEN+EP
Sbjct: 474 PEATAKALDADGWFDTGDLGWITRDAN----------IVLTGRAKDTIVLTNGENIEPQP 523
Query: 367 LEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI---VHADASELSKE-K 422
+E+A +RS I QI+++GQDQR GA++VP+ + + A+ + V D++ + E +
Sbjct: 524 IEDACIRSPYIDQIMLVGQDQRSLGALVVPNLDALQKWAEPQGLYIEVPGDSTSIPPEFQ 583
Query: 423 TIS--------LLYGELRKWTS-----KCSFQIGPIHVVDEPFTVN 455
TIS L GEL + ++GP +V EPF++
Sbjct: 584 TISLEDDRVQKLFRGELNAQVKDRPGYRPDDRVGPFRLVPEPFSIE 629
>gi|411117918|ref|ZP_11390299.1| AMP-forming long-chain acyl-CoA synthetase [Oscillatoriales
cyanobacterium JSC-12]
gi|410711642|gb|EKQ69148.1| AMP-forming long-chain acyl-CoA synthetase [Oscillatoriales
cyanobacterium JSC-12]
Length = 659
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 179/375 (47%), Positives = 253/375 (67%), Gaps = 20/375 (5%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+AT +YTSGTTG PKG ML+H NLLHQ+ +L +V + GD+ LS+LP WH YER+ Y
Sbjct: 194 DLATLIYTSGTTGKPKGAMLSHGNLLHQVETLGAVVQPKLGDRVLSILPTWHAYERSAEY 253
Query: 86 FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARA 145
F+ S+G +YT++R +K DL+ ++P YM+SVP ++E++Y G+QKQ ++ +
Sbjct: 254 FLLSQGCTQIYTSIRTVKKDLKDFKPQYMVSVPRIWESVYEGVQKQFREQPEKKQKLIHF 313
Query: 146 LIRISFAYTAFKRIYEGF-CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
+ IS Y +R++ L R P L+AL A+I+ IL PLH L EK+VY
Sbjct: 314 FLNISHRYIHARRVWNNLELLNREPSLPVRLLAL-----AQIV--ILAPLHALGEKIVYS 366
Query: 205 KIQSAI--GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K++ A G + +SGGGSL HID F+E +G++V VGYGLTE+SPV ARRP N+ G
Sbjct: 367 KVREAATGGQFRQAISGGGSLARHIDDFFEIMGIEVLVGYGLTETSPVTNARRPWRNLRG 426
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S G PI TEI+IVD E+ + LP G +G+V +RG Q+MQGY+ NP AT++A+D +GW ++
Sbjct: 427 SAGQPIPGTEIRIVDPESRKPLPVGERGLVLIRGPQIMQGYYNNPEATRKAIDPEGWFDS 486
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD+GW+ + LVL GRAKDTIVL+ GEN+EP +E+A LRS+ I QI++
Sbjct: 487 GDLGWVTKEND----------LVLTGRAKDTIVLTNGENIEPQPIEDACLRSAYIDQIML 536
Query: 383 IGQDQRRPGAIIVPD 397
+GQDQ+ GA+IVP+
Sbjct: 537 VGQDQKSLGALIVPN 551
>gi|428301191|ref|YP_007139497.1| AMP-dependent synthetase and ligase [Calothrix sp. PCC 6303]
gi|428237735|gb|AFZ03525.1| AMP-dependent synthetase and ligase [Calothrix sp. PCC 6303]
Length = 658
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 194/462 (41%), Positives = 289/462 (62%), Gaps = 34/462 (7%)
Query: 11 VIAGKHYKYET-IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKF 69
+ G+H T + D+AT +YTSGTTG PKGVML H N++HQ+ SL +V E GD
Sbjct: 184 TLGGQHTLIPTQLKRTDLATLIYTSGTTGKPKGVMLNHGNIMHQVTSLGSVVQPEKGDTV 243
Query: 70 LSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQ 129
LS+LP WH YER+C YF+FS+G +YT++R++K+DL++++P+Y+I+VP + E++Y G+Q
Sbjct: 244 LSILPSWHSYERSCEYFLFSQGCMQIYTSLRSIKNDLKKFKPNYIIAVPRLLESIYEGVQ 303
Query: 130 KQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICA 189
KQ +++ + + L IS Y +RI +G L + QPS L D + A+I
Sbjct: 304 KQFREQPPSKQKLVKNLFAISEKYIKAQRIVQGVSL--DNFQPSVL----DKITAQIQSI 357
Query: 190 ILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESS 248
L PLH + EKLVY K++ A G K VSGGG+LP ++D F+E +GV++ VGYGLTE+S
Sbjct: 358 FLAPLHAVGEKLVYGKVREATGGKVKQMVSGGGALPRYVDNFFEIVGVEIFVGYGLTETS 417
Query: 249 PVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPS 308
PV RR N+ G+ G I TE+KIV ET + + G +G+V +RG Q+MQGY++NP
Sbjct: 418 PVTHVRRSWRNLRGAAGLAIPGTEVKIVHPETRKPIENGQRGLVLLRGPQIMQGYYQNPE 477
Query: 309 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 368
AT +A+D +GW ++GD+GW++ + L+L GRAKDTIVL+ GEN+EP +E
Sbjct: 478 ATAKAIDSEGWFDSGDLGWVSDKND----------LILTGRAKDTIVLTNGENIEPQPIE 527
Query: 369 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI---VHADASELSKEKTIS 425
+A LRS I QI+++GQDQR GA+IVP+ E + A+ ++ + D LS + I+
Sbjct: 528 DACLRSPYIDQIMLVGQDQRSIGALIVPNLEALAKWAQEHNLDLCIQEDNVTLSGSQKIN 587
Query: 426 --------LLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 454
L EL + + +I P ++ EPF++
Sbjct: 588 LESKIIQDLFRQELNREVQNRPGYRPDDRINPFRLILEPFSM 629
>gi|17231094|ref|NP_487642.1| hypothetical protein alr3602 [Nostoc sp. PCC 7120]
gi|17132735|dbj|BAB75301.1| alr3602 [Nostoc sp. PCC 7120]
Length = 683
Score = 361 bits (927), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 195/469 (41%), Positives = 292/469 (62%), Gaps = 35/469 (7%)
Query: 5 LPILTPVIAGKHYKYETIGS--DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP 62
L L + GK++ + + +++AT +YTSGTTG PKGVML++ NLLHQ+ + +V
Sbjct: 202 LNFLQLIEVGKNHTFVPVKRKRNELATLIYTSGTTGKPKGVMLSYSNLLHQVTTFRVVVQ 261
Query: 63 AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYE 122
+ GD LS+LP WH YER Y++ S+G +YT +R++K DL++Y+P+YM++VP ++E
Sbjct: 262 PKVGDTALSILPSWHSYERTVEYYLLSQGCTQIYTNLRSVKADLKQYKPNYMVAVPRLWE 321
Query: 123 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 182
++Y G+QKQ A ++ + + L+ +S Y +RI +G L + S L LI
Sbjct: 322 SIYEGVQKQFREQPANKQRLIKFLLGMSEKYIKAQRIAQGTSL--DHLHASSLERLI--- 376
Query: 183 WARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVG 241
A+++ P H+L +KLVY K++ A G K +SGGG+LP HID F+E IGV++ G
Sbjct: 377 -AKVLEFAFLPFHVLGQKLVYGKVKEATGGRFKQVISGGGALPKHIDTFFEIIGVQILQG 435
Query: 242 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 301
YGLTE+SPV RRP N +G+ G PI TE+KIVD ET + LP G +G+V ++G QVMQ
Sbjct: 436 YGLTETSPVTNVRRPWRNFIGTSGQPIPGTEVKIVDPETRQPLPVGKRGLVLLKGPQVMQ 495
Query: 302 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 361
GY++NP AT +A+D GW ++GD+GW+ P + LVL GRAKDTIVLS GEN
Sbjct: 496 GYYQNPEATAKAIDPQGWFDSGDLGWVTPDNE----------LVLTGRAKDTIVLSNGEN 545
Query: 362 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI---VHADASEL 418
+EP +E+A LRS I QI+++GQDQR GA+IVP+ E + A+ ++ V D
Sbjct: 546 IEPQPIEDACLRSPYIDQIMLVGQDQRSIGALIVPNVEALAKWAESQNLVLSVEDDNLTS 605
Query: 419 SKEKTISL----LYGELRKWTS---------KCSFQIGPIHVVDEPFTV 454
S + I+L + G R+ + + ++GP ++ EPF++
Sbjct: 606 SSSQKINLESKMIQGLFRQELNREVQNRPGYRPDDRVGPFKLILEPFSI 654
>gi|409990099|ref|ZP_11273528.1| AMP-dependent synthetase and ligase [Arthrospira platensis str.
Paraca]
gi|291566551|dbj|BAI88823.1| probable long-chain-fatty-acid--CoA ligase [Arthrospira platensis
NIES-39]
gi|409939040|gb|EKN80275.1| AMP-dependent synthetase and ligase [Arthrospira platensis str.
Paraca]
Length = 647
Score = 360 bits (925), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 188/448 (41%), Positives = 275/448 (61%), Gaps = 32/448 (7%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+D+AT +YTSGTTG PKGVMLTH+N LHQ+ ++ D++ + G+ LS+LP WH R+
Sbjct: 188 EDLATLLYTSGTTGKPKGVMLTHRNFLHQLITIADVIAPQPGEIVLSILPTWHSLGRSGQ 247
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
Y+ SRG ++YT +R K DLQ ++P YM+SVP ++E++Y QKQ A R+ +
Sbjct: 248 YYFLSRGTMVIYTNIRYFKQDLQEFKPQYMVSVPRIWESIYEAAQKQFRDGPATRQKLVN 307
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
+S Y +RI + + + + AL A++ +L P+H L +KL+Y+
Sbjct: 308 FFFGMSNRYIEARRIVQKLTIPGQESNNNSSTAL-----AKLQTIVLTPVHALGDKLIYQ 362
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ A+G K +SGGGSL MH++ FYE +G+ + VGYGLTE++PV+ ARRP N+ GS
Sbjct: 363 KVRQAVGGKLKFAISGGGSLAMHLENFYEIVGIDLLVGYGLTETAPVLTARRPGHNLRGS 422
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
G PI TEI+I+D ET + G KG+V RG QVM+GYF+NP AT +A+D +GW +TG
Sbjct: 423 AGRPIPETEIRIIDPETRQTYEPGHKGLVLARGPQVMRGYFQNPEATDKAIDPEGWFDTG 482
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+GW+ P LVL GRAKDTIVL+ GEN+EP +E+A +RS I QIV++
Sbjct: 483 DLGWLTPQKD----------LVLTGRAKDTIVLTNGENIEPQPIEDACVRSPYIDQIVLV 532
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSI---VHADASELSKEKTI--------SLLYGELR 432
GQDQ+ GA+IVP+ + + A + V + + E I SL EL
Sbjct: 533 GQDQKSLGALIVPNLDALKQWASGQGLGLQVPGEEQQGEAENAIAIDSQPIQSLFRQELT 592
Query: 433 -KWTSKCSF----QIGPIHVVDEPFTVN 455
+ ++ SF +IGP ++ EPFT++
Sbjct: 593 LQVKNRPSFRPDDRIGPFRLILEPFTID 620
>gi|158338658|ref|YP_001519835.1| long-chain-fatty-acid-CoA ligase [Acaryochloris marina MBIC11017]
gi|158308899|gb|ABW30516.1| long-chain-fatty-acid-CoA ligase, putative [Acaryochloris marina
MBIC11017]
Length = 646
Score = 360 bits (924), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 187/405 (46%), Positives = 257/405 (63%), Gaps = 19/405 (4%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+ +AT +YTSGT+G PKGVML+H NLLH I ++ V E GD+ LS+LP WH + R
Sbjct: 188 EHLATLIYTSGTSGKPKGVMLSHGNLLHIITAMPAAVQPEVGDRILSILPTWHSFGRLVD 247
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
Y+ S+G +YT++RNLK DLQ Y+PHYM SVP ++E+LY G+QK+ A R+ +
Sbjct: 248 YYFLSQGCTQIYTSIRNLKGDLQTYKPHYMGSVPRLWESLYEGMQKKFRGEPATRQKLIN 307
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
IS Y +R +G + N PS L + A++ L PLH L +++VY
Sbjct: 308 TFFGISQKYILARRTQQGLDI--NNLNPSGLQRFL----AQLQMLFLGPLHQLGDRIVYT 361
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
KI+ A+G K SGGGSL MH++ F+EA+G+++ VGYGLTE+SPV+ +RR N+ S
Sbjct: 362 KIRQAMGGQFKQSFSGGGSLAMHLETFFEAVGIELIVGYGLTETSPVLTSRRAEHNLRRS 421
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
G PI TEI+IVD +T + LP G +G+V VRG QVMQGY++NP AT + +D++GW +TG
Sbjct: 422 AGKPIPKTEIRIVDPQTRQTLPTGQQGLVIVRGPQVMQGYYQNPEATAKVIDQEGWFDTG 481
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+GW+ P LVL GRAKDTIVLS GEN+EP LE+A RSS I QI+V+
Sbjct: 482 DLGWLTPTQD----------LVLTGRAKDTIVLSNGENIEPQPLEDACARSSFIDQIMVV 531
Query: 384 GQDQRRPGAIIVP--DKEEVLMAAKRLSIVHADASELSKEKTISL 426
GQDQR GA+IVP D + + + SI H + K ++
Sbjct: 532 GQDQRSLGALIVPNLDALQQWASEQNASIQHPGNTPTPGSKVLTF 576
>gi|254411220|ref|ZP_05024997.1| AMP-binding enzyme, putative [Coleofasciculus chthonoplastes PCC
7420]
gi|196181721|gb|EDX76708.1| AMP-binding enzyme, putative [Coleofasciculus chthonoplastes PCC
7420]
Length = 672
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 182/372 (48%), Positives = 250/372 (67%), Gaps = 17/372 (4%)
Query: 27 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 86
+AT +YTSGTTG PKGVMLTH NLLHQ+ + ++ + GD+ LS+LP WHVYER YF
Sbjct: 212 LATLMYTSGTTGKPKGVMLTHGNLLHQVTTFGIVLQPKGGDRILSILPTWHVYERTVEYF 271
Query: 87 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 146
+ S+G +YT +R++K DL+ ++P YMI VP ++E++Y G+QKQ ++ + L
Sbjct: 272 LLSQGCTQIYTTIRHVKADLKAFKPIYMIGVPRLWESIYDGVQKQFREQPPNKQKLVFTL 331
Query: 147 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 206
+ IS Y +RI +G L NQ PS L + L A I +L P H LA+KL+Y+ +
Sbjct: 332 LDISQRYIKARRIAQGLDL--NQLNPSPL----ERLSASIQALLLLPAHKLADKLIYQTV 385
Query: 207 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 265
+ A G K +SGGGSL MH++ F+E G+++ VGYGLTE+SPV RR N+ S G
Sbjct: 386 REATGGQIKTIISGGGSLAMHLENFFEIAGIEILVGYGLTETSPVTNVRRMERNLRRSSG 445
Query: 266 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 325
P+ T+I+IVD ET + LP G +G+V V+G QVMQGY+KNP AT +A+D DGW +TGD+
Sbjct: 446 LPMPGTQIRIVDPETRKPLPIGEQGLVLVKGPQVMQGYYKNPEATAKAIDSDGWFDTGDL 505
Query: 326 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 385
GW+ P+H LVL GRAKDTIVL+ GEN+EP +E+A LRS I QI+++GQ
Sbjct: 506 GWVTPNHD----------LVLTGRAKDTIVLTNGENIEPQPIEDACLRSPYIDQIMLVGQ 555
Query: 386 DQRRPGAIIVPD 397
DQR GA+IVP+
Sbjct: 556 DQRSLGALIVPN 567
>gi|170077298|ref|YP_001733936.1| long-chain-fatty-acid CoA ligase [Synechococcus sp. PCC 7002]
gi|169884967|gb|ACA98680.1| long-chain-fatty-acid CoA ligase (AMP-forming) [Synechococcus sp.
PCC 7002]
Length = 647
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 178/375 (47%), Positives = 244/375 (65%), Gaps = 17/375 (4%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+ T +YTSGTTG PKGVML+H N+L+Q+R+L ++ GD LS+LP WH YERA Y
Sbjct: 187 DLMTLIYTSGTTGKPKGVMLSHGNVLYQVRNLDQVIQPNPGDVTLSILPTWHSYERAAEY 246
Query: 86 FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARA 145
F+ S+G +YT +RN+K DLQ Y+P YM++VP ++E++Y G+QK + A ++ +
Sbjct: 247 FLLSQGCTQIYTNIRNIKKDLQTYKPGYMVAVPRIWESIYEGVQKNLREQPAKKQKLVNF 306
Query: 146 LIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKK 205
+ S Y +RI L + V+ + L AR L+P HLL KLVY+K
Sbjct: 307 FLTCSQNYVLAQRIANNLSLEH------FHVSSLTRLMARAKAIALYPFHLLGNKLVYEK 360
Query: 206 IQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 264
I+ A G + +SGGGSL HID F+E +G+ + VGYGLTE+SPV ARRP NV GS
Sbjct: 361 IRGATGGKIRYVISGGGSLAQHIDTFFEIVGINILVGYGLTETSPVTNARRPERNVCGSA 420
Query: 265 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 324
G + TEI+IVD ET + L G KG+V +RG QVMQGY++ P AT +A+D +GW ++GD
Sbjct: 421 GPALKGTEIRIVDPETRQTLSQGQKGLVLIRGPQVMQGYYRKPEATAKAIDPEGWFDSGD 480
Query: 325 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 384
+GW+ P G LVL GRAKDTIVL+ GEN+EP +E+A RS I QI+++G
Sbjct: 481 LGWVTPQ----------GDLVLTGRAKDTIVLTNGENIEPQPIEDACARSPYIDQIMLVG 530
Query: 385 QDQRRPGAIIVPDKE 399
QDQ+ GA+IVP+ E
Sbjct: 531 QDQKSLGALIVPNLE 545
>gi|359461826|ref|ZP_09250389.1| long-chain-fatty-acid-CoA ligase [Acaryochloris sp. CCMEE 5410]
Length = 646
Score = 357 bits (917), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 181/377 (48%), Positives = 247/377 (65%), Gaps = 17/377 (4%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+G + +AT +YTSGT+G PKGVML+H NLLH I ++ V E GD+ LS+LP WH + R
Sbjct: 185 LGREHLATLIYTSGTSGKPKGVMLSHGNLLHIITAMPAAVQPEVGDRILSILPTWHSFGR 244
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y+ S+G +YT++RNLK DLQ Y+PHYM SVP ++E+LY G+QK+ A R+
Sbjct: 245 LVDYYFLSQGCTQIYTSIRNLKGDLQTYKPHYMGSVPRLWESLYEGMQKKFRGEPATRQK 304
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
+ IS Y +R + + N PS L + A++ L PLH L +++
Sbjct: 305 LINTFFGISQKYILARRTQQRLDI--NNLNPSGLQRFL----AQLQMLFLGPLHQLGDRI 358
Query: 202 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
VY KI+ A+G K SGGGSL MH++ F+E +G+++ VGYGLTE+SPV+ ARR N+
Sbjct: 359 VYTKIRQAMGGQFKQSFSGGGSLAMHLETFFETVGIELIVGYGLTETSPVLTARRAEHNL 418
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
S G PI TEI+IVD +T + LP G +G+V VRG QVMQGY++NP AT + +D++GW
Sbjct: 419 RRSAGKPIPKTEIRIVDPQTRQTLPTGQQGLVIVRGPQVMQGYYQNPEATAKVIDQEGWF 478
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
+TGD+GW+ P LVL GRAKDTIVLS GEN+EP LE+A RS+ I QI
Sbjct: 479 DTGDLGWLTPTQD----------LVLTGRAKDTIVLSNGENIEPQPLEDACARSAFIDQI 528
Query: 381 VVIGQDQRRPGAIIVPD 397
+V+GQDQR GA+IVP+
Sbjct: 529 MVVGQDQRSLGALIVPN 545
>gi|332711790|ref|ZP_08431721.1| long-chain acyl-CoA synthetase [Moorea producens 3L]
gi|332349768|gb|EGJ29377.1| long-chain acyl-CoA synthetase [Moorea producens 3L]
Length = 659
Score = 357 bits (915), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 187/438 (42%), Positives = 275/438 (62%), Gaps = 25/438 (5%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+ +AT +YTSGTTG PKGVML+H NLLHQ+ +L ++ + D+ LS+LP WH YER+
Sbjct: 208 ETLATLLYTSGTTGKPKGVMLSHGNLLHQVNTLGTVIEIQKSDRVLSILPTWHAYERSAE 267
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
YF+ S+G +YT +R++K DL+ ++P++M+ VP ++E++Y G+QKQ ++ + +
Sbjct: 268 YFLLSQGSTQIYTNLRHVKKDLKTFKPNFMVGVPRLWESIYEGVQKQFREQPEGKQKLVQ 327
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
L+ S Y +R+ +G L P I L A + + LWP+H LA KLVY+
Sbjct: 328 NLLGFSQRYIEARRLAQGLTLDNLNPSP------IQKLLATVQASYLWPVHQLANKLVYQ 381
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ A G K +SGGGSL H+D F+E IGV+V VGYGLTE+SPV ARR N+ S
Sbjct: 382 KVREATGGEIKQVISGGGSLARHLDNFFEIIGVEVLVGYGLTETSPVTNARRSYRNLRFS 441
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
G P+ T+I+IVD ET++ LP G G+V V+G QVMQ Y+ P AT +A+D D W +TG
Sbjct: 442 AGPPLPETQIRIVDPETHQPLPQGQTGLVMVKGPQVMQEYYHKPEATAKAIDRDRWFDTG 501
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+GW+ P + LVL GRAKDTIVL+ GEN+EP +E+A LRS+ I QI+++
Sbjct: 502 DLGWVTPQND----------LVLTGRAKDTIVLTNGENIEPQPIEDACLRSAYIDQIMLV 551
Query: 384 GQDQRRPGAIIVP--DKEEVLMAAKRLSI-VHADASELSKEKTISLLYGELRKWTS---- 436
GQDQ+ GA+IVP D + AA+ L++ V A +L+ ++ +L EL +
Sbjct: 552 GQDQKALGALIVPNLDALQGWAAAQNLTLDVFAQDVDLNTKEVQTLYRTELNREVQNRPG 611
Query: 437 -KCSFQIGPIHVVDEPFT 453
+ +I ++ EPF+
Sbjct: 612 YRQDDRISTFRLILEPFS 629
>gi|428216435|ref|YP_007100900.1| o-succinylbenzoate--CoA ligase [Pseudanabaena sp. PCC 7367]
gi|427988217|gb|AFY68472.1| o-succinylbenzoate--CoA ligase [Pseudanabaena sp. PCC 7367]
Length = 626
Score = 357 bits (915), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 191/446 (42%), Positives = 277/446 (62%), Gaps = 37/446 (8%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I D +AT +YTSGT+G PKGVMLTH N+L Q+R +V GD+ LS+LP WH YER
Sbjct: 176 ITRDTLATLIYTSGTSGKPKGVMLTHGNILTQVRGGTAMVKPFPGDRILSILPTWHSYER 235
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
+C YF+FS+G+ +YT +R +K+DL ++P YM++VP ++E++Y GIQ++ SA +R
Sbjct: 236 SCEYFLFSQGVTQIYTNLRKIKNDLATFKPQYMLAVPRLWESIYEGIQRKFDAESATKRK 295
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
+ L+ S Y +R+ G LT + L AR+ PL+ LA+KL
Sbjct: 296 LINFLLNASNTYIKARRVVNGLSLTGGNQ-----------LKARLTMFAYAPLYWLAKKL 344
Query: 202 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
V+ KI++ IG K SGGG+L H++LFYEA +++ VGYGLTE+SP++ ARRP N+
Sbjct: 345 VFDKIRAGIGGEFKYICSGGGALQPHLELFYEAAQIEILVGYGLTETSPMVTARRPERNL 404
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
+ G P+ EIKIVD ET E P G +G+V RG +MQGY+KNP AT +A+D DGW
Sbjct: 405 RTTSGIPLPDAEIKIVDPETKEAFPPGKRGLVMARGPMIMQGYYKNPEATNKAIDADGWF 464
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
NTGD+G++ + L + GRAKDTIVLS GEN+EPL +E+A S+ I QI
Sbjct: 465 NTGDLGFLTHKND----------LTITGRAKDTIVLSNGENIEPLSIEDACSSSTYIDQI 514
Query: 381 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADA------SELSKEKTISLLYGEL-RK 433
+++GQDQR+ GA+IVP+ L A + ++ AD+ L+++K ++ EL RK
Sbjct: 515 MLVGQDQRQLGALIVPN----LKALEVDGLLPADSELAESIDLLNQDKIRNVFRSELTRK 570
Query: 434 WTSK----CSFQIGPIHVVDEPFTVN 455
+ + +IGP + EPF ++
Sbjct: 571 VQDRPGQSINDRIGPFEFLPEPFDIS 596
>gi|376004162|ref|ZP_09781920.1| putative long-chain-fatty-acid-CoA ligase, AMP dependent
[Arthrospira sp. PCC 8005]
gi|375327496|emb|CCE17673.1| putative long-chain-fatty-acid-CoA ligase, AMP dependent
[Arthrospira sp. PCC 8005]
Length = 647
Score = 354 bits (909), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 186/448 (41%), Positives = 273/448 (60%), Gaps = 32/448 (7%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+D+AT +YTSGTTG PKGVMLTH+N LHQ+ ++ D++ + G+ LS+LP WH R+
Sbjct: 188 EDLATLLYTSGTTGKPKGVMLTHRNFLHQLITIADVIAPQPGEIVLSILPTWHSLGRSGQ 247
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
Y+ SRG ++YT +R K DLQ ++P YM+SVP ++E++Y QKQ A R+ +
Sbjct: 248 YYFLSRGTMVIYTNIRYFKQDLQEFKPQYMVSVPRIWESIYEAAQKQFRDGPATRQKLVN 307
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
+S Y +RI + + + AL A++ +L P+H L +KL+Y+
Sbjct: 308 FFFGMSNRYIEARRIVQKLTIPGQGSNQNSSTAL-----AKLQTILLTPVHALGDKLIYQ 362
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ A+G K +SGGGSL MH++ FYE +G+ + VGYGLTE++PV+ ARRP+ N+ GS
Sbjct: 363 KVRQAVGGKLKFAISGGGSLAMHLENFYEIVGIDLLVGYGLTETAPVLTARRPSHNLRGS 422
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
G PI TEI+I+D ET + G KG+V RG QVM GYF+NP AT +A+D +GW +TG
Sbjct: 423 AGRPIPETEIRIIDPETRQTCEPGYKGLVLARGPQVMTGYFQNPEATDKAIDPEGWFDTG 482
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+GW+ P LVL GRAKDTIVL+ GEN+EP +E+A +RS I QIV++
Sbjct: 483 DLGWLTPQKD----------LVLTGRAKDTIVLTNGENIEPQPIEDACVRSPYIDQIVLV 532
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSI---VHADASELSKEKTI--------SLLYGELR 432
GQDQ+ GA+IVP+ + + A + V + + E I SL EL
Sbjct: 533 GQDQKSLGALIVPNLDALKQWASGQGLHLQVPGEEQQGETENAIAIDSQPIQSLFRQELN 592
Query: 433 -KWTSKCSF----QIGPIHVVDEPFTVN 455
+ ++ SF +IG ++ EPF+++
Sbjct: 593 LQVKNRPSFRPDDRIGQFRLILEPFSID 620
>gi|209524077|ref|ZP_03272628.1| AMP-dependent synthetase and ligase [Arthrospira maxima CS-328]
gi|423066015|ref|ZP_17054805.1| AMP-dependent synthetase and ligase [Arthrospira platensis C1]
gi|209495452|gb|EDZ95756.1| AMP-dependent synthetase and ligase [Arthrospira maxima CS-328]
gi|406712514|gb|EKD07699.1| AMP-dependent synthetase and ligase [Arthrospira platensis C1]
Length = 648
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 186/448 (41%), Positives = 273/448 (60%), Gaps = 32/448 (7%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+D+AT +YTSGTTG PKGVMLTH+N LHQ+ ++ D++ + G+ LS+LP WH R+
Sbjct: 189 EDLATLLYTSGTTGKPKGVMLTHRNFLHQLITIADVIAPQPGEIVLSILPTWHSLGRSGQ 248
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
Y+ SRG ++YT +R K DLQ ++P YM+SVP ++E++Y QKQ A R+ +
Sbjct: 249 YYFLSRGTMVIYTNIRYFKQDLQEFKPQYMVSVPRIWESIYEAAQKQFRDGPATRQKLVN 308
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
+S Y +RI + + + AL A++ +L P+H L +KL+Y+
Sbjct: 309 FFFGMSNRYIQARRIVQKLTIPGQGSNQNSSTAL-----AKLQTILLTPVHALGDKLIYQ 363
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ A+G K +SGGGSL MH++ FYE +G+ + VGYGLTE++PV+ ARRP+ N+ GS
Sbjct: 364 KVRQAVGGKLKFAISGGGSLAMHLENFYEIVGIDLLVGYGLTETAPVLTARRPSHNLRGS 423
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
G PI TEI+I+D ET + G KG+V RG QVM GYF+NP AT +A+D +GW +TG
Sbjct: 424 AGRPIPETEIRIIDPETRQTCEPGYKGLVLARGPQVMTGYFQNPEATDKAIDPEGWFDTG 483
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+GW+ P LVL GRAKDTIVL+ GEN+EP +E+A +RS I QIV++
Sbjct: 484 DLGWLTPQKD----------LVLTGRAKDTIVLTNGENIEPQPIEDACVRSPYIDQIVLV 533
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSI---VHADASELSKEKTI--------SLLYGELR 432
GQDQ+ GA+IVP+ + + A + V + + E I SL EL
Sbjct: 534 GQDQKSLGALIVPNLDALKQWASGQGLHLQVPGEEQQGETENAIAIDSQPIQSLFRQELN 593
Query: 433 -KWTSKCSF----QIGPIHVVDEPFTVN 455
+ ++ SF +IG ++ EPF+++
Sbjct: 594 LQVKNRPSFRPDDRIGQFRLILEPFSID 621
>gi|428207002|ref|YP_007091355.1| AMP-dependent synthetase and ligase [Chroococcidiopsis thermalis
PCC 7203]
gi|428008923|gb|AFY87486.1| AMP-dependent synthetase and ligase [Chroococcidiopsis thermalis
PCC 7203]
Length = 674
Score = 354 bits (908), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 179/376 (47%), Positives = 249/376 (66%), Gaps = 17/376 (4%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
D +AT +YTSGTTG PKGVML+H NLLHQ+ S +V E GD+ LS+LP WH YER+
Sbjct: 198 DTLATLMYTSGTTGKPKGVMLSHGNLLHQVTSFGAVVQPEIGDRILSILPVWHCYERSVE 257
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
YF+ S+G +YT +R++K DL+ ++P M+ VP ++E++Y G+QKQ ++ +
Sbjct: 258 YFLLSQGCTQIYTNIRHVKADLKAFKPRLMVGVPRLWESIYEGVQKQFRDQPVKKQRLIY 317
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
+L+ IS Y +RI G L P + L A I A+L P+H LA++L+YK
Sbjct: 318 SLLNISQRYIKARRIVRGLALDNLYPSP------LQRLQAGIQTAVLAPIHNLADRLIYK 371
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
+++ A G + +SGGGSL MH++ F+E +GV++ VGYGLTE+SPV RRP N+ GS
Sbjct: 372 QVREATGGRIRQVISGGGSLAMHLENFFEIVGVEILVGYGLTETSPVTHVRRPWRNLRGS 431
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
G P+ TE KIVD ET + LP +G+V +RG QVMQGY+KNP AT +A+D +GW +TG
Sbjct: 432 SGLPMAGTEAKIVDPETRQTLPPMQRGLVLIRGPQVMQGYYKNPEATAKAIDPEGWFDTG 491
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+G + P + +VL GRAKDTIVLS GEN+EP +E+A LRS I QI+++
Sbjct: 492 DLGLVTPKND----------IVLTGRAKDTIVLSNGENIEPQPIEDACLRSPYIDQIMLV 541
Query: 384 GQDQRRPGAIIVPDKE 399
GQDQR GA+IVP+ E
Sbjct: 542 GQDQRSLGALIVPNLE 557
>gi|428307720|ref|YP_007144545.1| long-chain-fatty-acid--CoA ligase [Crinalium epipsammum PCC 9333]
gi|428249255|gb|AFZ15035.1| Long-chain-fatty-acid--CoA ligase [Crinalium epipsammum PCC 9333]
Length = 662
Score = 353 bits (907), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 175/374 (46%), Positives = 249/374 (66%), Gaps = 17/374 (4%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
D +AT +YTSGTTG PKGVML+H NLLHQ+ +L ++ + G K LS+LP WH YER+
Sbjct: 197 DTLATLIYTSGTTGQPKGVMLSHGNLLHQVTTLGTVIKPQQGSKVLSILPSWHSYERSAE 256
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
YF+ S+G +YT +R +K DL+ ++P+YMI+VP ++E++Y G QKQ + ++ +
Sbjct: 257 YFLLSQGCTQLYTNLRYIKQDLKTFKPNYMIAVPRLWESIYEGAQKQFREQPSNKQKLIN 316
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
IS Y +R+ +G L PS + + A++ ++L P+H L E+LVY
Sbjct: 317 TFFSISQRYIKARRLAQGLDL--ENLNPSA----TEKISAKVQASVLAPVHALGERLVYG 370
Query: 205 KIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ A G V SGGGSL H++ F+E IGV + VGYGLTE+SPV ARRP N+ GS
Sbjct: 371 KVREATGGEIIQVISGGGSLAKHLENFFEIIGVNILVGYGLTETSPVTNARRPWHNLRGS 430
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
G PI TEIKIV+ ET + LP G +G+V ++G QVMQGY++NP AT +A+D +GW ++G
Sbjct: 431 SGKPIPGTEIKIVNPETRQPLPTGERGLVLIKGPQVMQGYYQNPEATAKAIDSEGWFDSG 490
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+GW+ + LVL GRAKDTIVL+ GEN+EP +E+A LRS+ + QIV++
Sbjct: 491 DLGWVTKEND----------LVLTGRAKDTIVLTNGENIEPQPIEDACLRSAYVDQIVLV 540
Query: 384 GQDQRRPGAIIVPD 397
GQDQ+ GA+IVP+
Sbjct: 541 GQDQKSLGALIVPN 554
>gi|428210574|ref|YP_007083718.1| AMP-forming long-chain acyl-CoA synthetase [Oscillatoria acuminata
PCC 6304]
gi|427998955|gb|AFY79798.1| AMP-forming long-chain acyl-CoA synthetase [Oscillatoria acuminata
PCC 6304]
Length = 668
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 194/452 (42%), Positives = 278/452 (61%), Gaps = 38/452 (8%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+ +AT +YTSGTTG PKGVMLTH NLLHQI +L ++ GD+ +++LP WH + R
Sbjct: 204 ETLATLIYTSGTTGKPKGVMLTHGNLLHQIENLPTLMQPTPGDRIITILPTWHSFGRMGQ 263
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
YF+ SRG YT +R LK DL+ Y P Y VP ++E++Y G+QKQ A R+ + +
Sbjct: 264 YFLLSRGCSQFYTNIRYLKADLKEYHPKYTFGVPRLWESIYEGVQKQFREQPANRQKLVK 323
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
S +Y RI +G L Q +P+ + + L A I A+LWPLH L ++LVY
Sbjct: 324 TFFGFSQSYIEAGRILQGLQL---QLEPA---SGSEKLLAGIKRALLWPLHTLGDRLVYN 377
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ A G + +SGGGSL MHI+ F+E IG+ V VGYGLTE+SPV+ ARR N+ GS
Sbjct: 378 KVRQATGGQLQYVISGGGSLAMHIENFFEIIGIDVLVGYGLTETSPVLTARRFWKNLRGS 437
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
G PI +TE++IV ET + L G +G+V RG Q+MQGY++NP AT +A+D +GW +TG
Sbjct: 438 AGRPIPYTELRIVHPETRKPLQTGERGLVLARGPQIMQGYYQNPEATTKAIDPEGWFDTG 497
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+GW+ P G LVL GRAKDTIVL+ GEN+EP +E+A +RS+ I Q++++
Sbjct: 498 DLGWLTP----------GNDLVLTGRAKDTIVLTNGENIEPQPIEDACIRSAYIDQMMLV 547
Query: 384 GQDQRRPGAIIVPDKEEVLM--AAKRLSIVHAD---------AS-----ELSKEKTISLL 427
GQDQ+ GA+IVP+ E + +++ LS+ + AS +LS + +L
Sbjct: 548 GQDQKCLGALIVPNFEALQQWASSQNLSLRLPENVSQGNPPPASGTREIDLSSPEVDNLF 607
Query: 428 YGELRKWTS-----KCSFQIGPIHVVDEPFTV 454
EL + + +IGP ++ EPFT+
Sbjct: 608 RQELNREVKNRPGYRPDDRIGPFSLLSEPFTM 639
>gi|427736347|ref|YP_007055891.1| AMP-forming long-chain acyl-CoA synthetase [Rivularia sp. PCC 7116]
gi|427371388|gb|AFY55344.1| AMP-forming long-chain acyl-CoA synthetase [Rivularia sp. PCC 7116]
Length = 663
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 196/447 (43%), Positives = 274/447 (61%), Gaps = 33/447 (7%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
D +AT +YTSGT+G PKGVML+H NLL+Q+R+L IV E GD LS+LP WHV ER
Sbjct: 204 DSLATLLYTSGTSGKPKGVMLSHGNLLYQVRNLRAIVQPEAGDVVLSILPTWHVLERTGE 263
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
YF+ S+G +YT +R++K+DL++Y+PHYMI+VP + E++Y G+QKQ +++ +
Sbjct: 264 YFLLSQGCTQVYTNLRSIKNDLKKYKPHYMIAVPRILESVYEGVQKQFREQPTSKQNLIN 323
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
+ IS Y +RI + L +A A I L PLH LA K+VY
Sbjct: 324 RFLGISGKYIQARRIAQNLDLQNLNPSTGERIA------ASIQEKALSPLHALAGKIVYG 377
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ A G K + GGG+L HID FYE IG+++ VGYGLTE+SPV ARR N+ GS
Sbjct: 378 KVKEATGGRIKQFICGGGALAKHIDDFYEIIGIEILVGYGLTETSPVTHARRHWSNLRGS 437
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
G + TE+KIVD ET + L KG+V ++G Q+MQGY+KNP ATK+A+D +GW ++G
Sbjct: 438 SGLGVPGTEVKIVDLETRKELAPTEKGLVLLKGPQIMQGYYKNPEATKKAIDSEGWFDSG 497
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+GW+ P +VL GRAKDTIVL+ GEN+EPL +E+A LRSS I QI+++
Sbjct: 498 DLGWVTPRLD----------IVLTGRAKDTIVLTNGENIEPLPIEDACLRSSFIDQIMLV 547
Query: 384 GQDQRRPGAIIVPDKE--EVLMAAKRLSI-VHADASELSKEKTISL------------LY 428
GQD++ GA IVP+ E E A+ L + V D S + I+L L
Sbjct: 548 GQDKKSLGAFIVPNVEALEKWAEAQNLELCVKEDNVTSSTSQKINLESKMIQDLFRQELT 607
Query: 429 GELRKWTS-KCSFQIGPIHVVDEPFTV 454
E+R + +IGP ++ EPF++
Sbjct: 608 REVRNRPGYRPDDRIGPFKLILEPFSM 634
>gi|113475497|ref|YP_721558.1| AMP-dependent synthetase and ligase [Trichodesmium erythraeum
IMS101]
gi|110166545|gb|ABG51085.1| AMP-dependent synthetase and ligase [Trichodesmium erythraeum
IMS101]
Length = 657
Score = 350 bits (898), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 193/437 (44%), Positives = 268/437 (61%), Gaps = 23/437 (5%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+ +AT +YTSGTTG PKGVM+TH NLL+QI L +V G+ LS+LP WH + R
Sbjct: 208 ETLATLIYTSGTTGKPKGVMVTHGNLLYQINFLGTVVQPSPGEFTLSILPTWHSFGRTAE 267
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
Y S+G +YT R LK DLQ ++PHY++SVP ++E +Y G+Q+Q+ A ++ +AR
Sbjct: 268 YLFLSQGCTQIYTNKRYLKKDLQEHKPHYLMSVPRIWELIYEGVQRQLREQPANKQKLAR 327
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
+ IS Y R+ + L N PS L L+ A +LWP+H L K+VY+
Sbjct: 328 FFLDISERYIQACRVTQELVLELNS--PSELEKLM----ATWQSWLLWPIHALGTKIVYQ 381
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
KI+ A G K VSGGGSL MH++ F+E IG+ + VGYGLTE+SPV+ R N+ GS
Sbjct: 382 KIRQATGGRLKFAVSGGGSLGMHLENFFEIIGIDLLVGYGLTETSPVLTVRHYWENLRGS 441
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
G P+ TEIKIV+ ET E L G KG+V RG Q+M GY++NP ATK+A+D +GWLNTG
Sbjct: 442 SGRPLPGTEIKIVNPETYETLGFGEKGLVLARGPQIMVGYYQNPEATKKAIDSEGWLNTG 501
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
DIGWI P + L+L GRAKDTIVL+ GEN+EP +E A RS I QI+++
Sbjct: 502 DIGWINPRND----------LILTGRAKDTIVLTNGENIEPQPIENACTRSQYIDQIMLV 551
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKWTS-----K 437
GQDQ+ GA+IVP+ E V + A + + + K + + L+ EL + +
Sbjct: 552 GQDQKYLGALIVPNFEAVELWATQSQLSESQPKIDWKSQALQELFRQELNQEVKNRPGYR 611
Query: 438 CSFQIGPIHVVDEPFTV 454
+IGP ++ +PFT+
Sbjct: 612 PDDRIGPFRLILDPFTI 628
>gi|218437444|ref|YP_002375773.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 7424]
gi|218170172|gb|ACK68905.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 7424]
Length = 638
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 194/451 (43%), Positives = 269/451 (59%), Gaps = 39/451 (8%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+D+AT +YTSGTTG PKGVMLTH N L++I S + GD+ LS+LP WH YER
Sbjct: 178 EDLATLLYTSGTTGKPKGVMLTHGNFLYEINSFGVAFQPDPGDRVLSILPSWHAYERTVE 237
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
Y++ S+G +YT +RN K+DL++++PH M+ VP ++E++Y IQKQ A +R +
Sbjct: 238 YYVLSQGSTQIYTNLRNFKNDLKQFKPHLMVGVPRLWESIYESIQKQFREQPAKKRKIVN 297
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
+ +S Y KRI F L V+ + L AR+ +L PLH + ++LVY+
Sbjct: 298 FFLNLSENYVIAKRIANNFSLDHLD------VSASERLMARVKATVLAPLHRVGDRLVYQ 351
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
KI+ +G KA +SGGGSL HID FYE + + V VGYGLTE+SPV R NV GS
Sbjct: 352 KIREGVGGKVKAWISGGGSLARHIDTFYEIVNIPVLVGYGLTETSPVTNVRTLDHNVRGS 411
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
G P+ TEI+IVD ET + LP KG+V +RG QVMQGY+K P AT +A+D GW ++G
Sbjct: 412 SGPPLPRTEIRIVDPETRQDLPPKEKGLVLIRGPQVMQGYYKKPEATAKAIDPQGWFDSG 471
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+G + P + LVL GRAKDTIVLS GEN+EP +E+A +RS I QI+++
Sbjct: 472 DLGCVTPIND----------LVLTGRAKDTIVLSNGENIEPQPIEDACVRSPYIDQIMLV 521
Query: 384 GQDQRRPGAIIVPD--------KEEVL------MAAKRLSIVHADASELSKEKTISLLYG 429
GQDQ+ GA+IVP+ KE+ L + A R I H S L + +LL
Sbjct: 522 GQDQKALGALIVPNLDALSAWGKEQQLDLDIPDIHASRDRIKH---SSLYDKPVQTLLRQ 578
Query: 430 ELRKWTS-----KCSFQIGPIHVVDEPFTVN 455
EL + + QI ++ EPF+++
Sbjct: 579 ELNQRVKDRPGYRIDDQIKVFELILEPFSID 609
>gi|284928783|ref|YP_003421305.1| AMP-forming long-chain acyl-CoA synthetase [cyanobacterium UCYN-A]
gi|284809242|gb|ADB94947.1| AMP-forming long-chain acyl-CoA synthetase [cyanobacterium UCYN-A]
Length = 638
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 176/387 (45%), Positives = 248/387 (64%), Gaps = 19/387 (4%)
Query: 14 GKHYKYETI--GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLS 71
GK++ +I D+AT +YTSGTTG PKG ML+H N+LHQIRSL I+ + GD+ LS
Sbjct: 165 GKNFDLRSIVKKDTDLATLIYTSGTTGKPKGAMLSHGNILHQIRSLDTIIKPKPGDRILS 224
Query: 72 MLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
+LP WH YER+ YF+ S+G L+YT +RN K+DL++++PH+M+ VP ++E+LY IQKQ
Sbjct: 225 ILPSWHSYERSAEYFLLSQGCTLIYTNIRNFKNDLKKFKPHHMVGVPRLWESLYEVIQKQ 284
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
S A+ + + S + +RI+ CL+ +PS+ + A I L
Sbjct: 285 FREQSVAKEKIIKYCFENSLKFIVCRRIFN--CLSLENLKPSFQTRAM----AFIKLIAL 338
Query: 192 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
+P+H LA+ LVY++I+ +G S K +SGGGSL H+D FYE I + + VGYGLTE+SPV
Sbjct: 339 YPIHKLADLLVYRQIRDNLGGSFKTLISGGGSLAKHLDDFYEIIDIPILVGYGLTETSPV 398
Query: 251 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSAT 310
AR N+ G+ G PI TEI IVD T ++L G G++ +RG QVMQGY+K T
Sbjct: 399 ANARTHKHNLRGTAGQPIAGTEINIVDPNTRQILSKGKCGLILIRGPQVMQGYYKKIEET 458
Query: 311 KQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA 370
+ D GW ++GD+GW+ P + LV+ GR KDTIVLS GEN+EP +E+A
Sbjct: 459 NKVKDSQGWFDSGDLGWLTPMND----------LVITGRIKDTIVLSNGENIEPQPIEDA 508
Query: 371 ALRSSLIRQIVVIGQDQRRPGAIIVPD 397
LRS I QI+++GQDQ+ GA+IVP+
Sbjct: 509 CLRSVYIDQIMLVGQDQKMLGALIVPN 535
>gi|22298844|ref|NP_682091.1| long-chain-fatty-acid CoA ligase [Thermosynechococcus elongatus
BP-1]
gi|22295025|dbj|BAC08853.1| long-chain-fatty-acid CoA ligase [Thermosynechococcus elongatus
BP-1]
Length = 658
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 200/451 (44%), Positives = 275/451 (60%), Gaps = 33/451 (7%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I D++AT +YTSGTTG PKGVM+TH LL QI +L+ IV + GD+ LS+LP WH YER
Sbjct: 196 ITPDNLATLMYTSGTTGQPKGVMVTHGGLLSQIVNLWAIVQPQVGDRVLSILPIWHAYER 255
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
YF+F+ G YT +R+ K+DL+R +PHYMI+VP ++E+ Y G+QKQ+ S A +R
Sbjct: 256 VAEYFLFACGCSQTYTNLRHFKNDLKRCKPHYMIAVPRIWESFYEGVQKQLRDSPATKRR 315
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
+A+ + + Y +R+ G LT + WL AR+ +L PL+ L EK
Sbjct: 316 LAQFFLSVGQQYILQRRLLTGLSLTNPHPR-----GWQKWL-ARVQTLLLKPLYELGEKR 369
Query: 202 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
+Y KI+ A G K +SGGG+L H+D FYE I ++V VGYGLTE++ V+ ARR N+
Sbjct: 370 LYSKIREATGGEIKQVISGGGALAPHLDTFYEVINLEVLVGYGLTETAVVLTARRSWANL 429
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
GS G PI T IKIVD ET L G KG+V +G QVM+GY+ P AT + LD +GW
Sbjct: 430 RGSAGRPIPDTAIKIVDPETKAPLEFGQKGLVMAKGPQVMRGYYNQPEATAKVLDAEGWF 489
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
+TGD+G++ P+ G LVL GR KDTIVLS GEN+EP +E+A +RS I QI
Sbjct: 490 DTGDLGYLTPN----------GDLVLTGRQKDTIVLSNGENIEPQPIEDACVRSPYIDQI 539
Query: 381 VVIGQDQRRPGAIIVPDKE--EVLMAAK--RLSIVHADASELSKE------KTISLLYGE 430
+++GQDQ+ GA+IVP+ E E + AK RL + + A S E K I LY +
Sbjct: 540 MLVGQDQKALGALIVPNLEALEAWVVAKGYRLELPNRPAQAGSGEVVTLESKVIIDLYRQ 599
Query: 431 --LRKWTSKCSF----QIGPIHVVDEPFTVN 455
LR+ ++ + +I V EPFT+
Sbjct: 600 ELLREVQNRPGYRPDDRIATFRFVLEPFTIE 630
>gi|300868267|ref|ZP_07112896.1| AMP-dependent synthetase and ligase [Oscillatoria sp. PCC 6506]
gi|300333702|emb|CBN58080.1| AMP-dependent synthetase and ligase [Oscillatoria sp. PCC 6506]
Length = 651
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 184/436 (42%), Positives = 266/436 (61%), Gaps = 27/436 (6%)
Query: 27 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 86
+AT +YTSGTTG PKGV+LTH NLLHQI + I+ + G+ LS+LP WH YER Y+
Sbjct: 206 LATLLYTSGTTGKPKGVILTHGNLLHQITTFGVILQPQPGESALSILPSWHAYERTVEYY 265
Query: 87 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 146
+ S+G +YT++R K D + +P YM+SVP +++++Y QKQ A ++ + L
Sbjct: 266 LLSQGCTQIYTSIRYFKQDFKTCKPQYMVSVPRIWDSIYEAAQKQFREQPANKQKLVNFL 325
Query: 147 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 206
+ S Y +RI + L P+ L A+I +L PLH + EKL+Y+K+
Sbjct: 326 LGTSLKYIQSRRIAQDLTLNLEPPTPA------KKLTAQIKTILLLPLHAIGEKLIYQKV 379
Query: 207 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 265
+ A G K +SGGGSL MH+D F+E G+ + VGYGLTE+SPV+ RRP N+ GS G
Sbjct: 380 RQATGGQFKCAISGGGSLAMHLDNFFEITGINLLVGYGLTETSPVLTVRRPWHNLRGSAG 439
Query: 266 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 325
P+ TEIKIVD ET + LP G G+V RG Q+M GY+ NP AT +A+D++GW +TGD+
Sbjct: 440 QPLPETEIKIVDPETRKPLPIGQIGLVLGRGPQIMGGYYLNPQATAKAIDKEGWFDTGDL 499
Query: 326 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 385
GW+ G L+L GRAKDTIVL+ GEN+EP +E+A+LRS+ I QI+++GQ
Sbjct: 500 GWMT----------SGNDLILTGRAKDTIVLTNGENIEPQPIEDASLRSAYIDQIMLVGQ 549
Query: 386 DQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL--SKEKTISLLYGELRKWTS-----KC 438
DQ+ GA+IVP+ E V K ++ ++ E+ + + L EL + +
Sbjct: 550 DQKFLGALIVPNHEAV---QKWIASLNPSLQEIDWNSKAVQDLFRQELNREVQNRPGYRP 606
Query: 439 SFQIGPIHVVDEPFTV 454
+IG ++ EPF+V
Sbjct: 607 DDRIGSFRLILEPFSV 622
>gi|427421674|ref|ZP_18911857.1| AMP-forming long-chain acyl-CoA synthetase [Leptolyngbya sp. PCC
7375]
gi|425757551|gb|EKU98405.1| AMP-forming long-chain acyl-CoA synthetase [Leptolyngbya sp. PCC
7375]
Length = 641
Score = 344 bits (883), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 185/438 (42%), Positives = 262/438 (59%), Gaps = 26/438 (5%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+AT +YTSGT+G PKGVML+ NLL QI +V + G K +S+LP WH YER Y
Sbjct: 192 DLATLMYTSGTSGRPKGVMLSQDNLLSQISGACSVVHPKPGSKVMSILPIWHCYERTFEY 251
Query: 86 FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARA 145
F S+G++ +YT +R +K DL+ Y+P+YM+ VP ++E++Y G+QKQ +++ +
Sbjct: 252 FTLSQGVQQVYTNIRYVKKDLKAYKPNYMVGVPRLWESIYEGVQKQFREQPESKQKLINF 311
Query: 146 LIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKK 205
+ S Y A KRI E L Y + D A I CA+L P H L + +VYKK
Sbjct: 312 FLHQSQRYIAAKRIAENLSL-------DYSPSAFDRAMASIQCAVLLPFHKLGDSMVYKK 364
Query: 206 IQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 264
I+ A G VSGGGS+ H++ FYE I V + GYGLTE+SP+ RRP N+ G+
Sbjct: 365 IREATGGDINFVVSGGGSIADHLEDFYEIIDVAILGGYGLTETSPITHVRRPWQNLRGAD 424
Query: 265 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 324
G P+ TE +IVD ++ + +P G KG+V VRG Q+MQGY+KNP AT +A+D DGW +TGD
Sbjct: 425 GQPLPGTETRIVDLDSRQDVPQGQKGLVLVRGPQIMQGYYKNPDATSKAIDPDGWFDTGD 484
Query: 325 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 384
+G I G LV+ GRAKDTIVL++GEN+EP +E A RS + QI+++G
Sbjct: 485 LGKIT----------ANGDLVITGRAKDTIVLTSGENIEPQPIENACARSKYVDQIMLVG 534
Query: 385 QDQRRPGAIIVPDKEEVLMAAKRLSIVHADAS---ELSKEKTISLLYGELRKWTS----- 436
QDQ+ GA+IVP+ E + A I D + L+ K +L EL +
Sbjct: 535 QDQKVLGALIVPNLEALSQWATTQGITIDDDNPVESLNNSKVQTLFKQELTREVKARPGH 594
Query: 437 KCSFQIGPIHVVDEPFTV 454
+ +IGP ++ EPF++
Sbjct: 595 RPDERIGPFTLLSEPFSM 612
>gi|428299082|ref|YP_007137388.1| long-chain-fatty-acid--CoA ligase [Calothrix sp. PCC 6303]
gi|428235626|gb|AFZ01416.1| Long-chain-fatty-acid--CoA ligase [Calothrix sp. PCC 6303]
Length = 657
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 185/436 (42%), Positives = 265/436 (60%), Gaps = 25/436 (5%)
Query: 27 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 86
+AT +YTSGTTG PKGVMLTH N LHQI +L I+ GDK LS+LP WH + R Y+
Sbjct: 209 LATLIYTSGTTGKPKGVMLTHGNFLHQISTLTAIIQPSVGDKTLSILPTWHSFGRVGEYY 268
Query: 87 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 146
+G+ +Y+ R LK DLQ Y P Y+I VP ++E++Y GIQK + + + ++
Sbjct: 269 TLGQGVTQIYSNRRYLKQDLQDYTPQYVIGVPRLWESIYEGIQKSFRDKTPRMQKLIKSF 328
Query: 147 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 206
+ +S Y R ++ L S ++ A I +L PLH L E +VYKKI
Sbjct: 329 LAVSKKYIKAVRTWKKIDLQNLNPTTSQIIN------AWITTILLAPLHFLGEMIVYKKI 382
Query: 207 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 265
Q A G K + GGGSL H++ F+E +G+++ VGYGLTE+SPV++ARR N+ G+ G
Sbjct: 383 QLATGGKVKQLICGGGSLAQHLEDFFEIVGIQILVGYGLTETSPVLSARRYYKNLRGASG 442
Query: 266 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 325
P+ TE+KIVD ET++ LP G +G+V +G Q+MQGY+ NP AT +A+D +GW +TGDI
Sbjct: 443 LPLASTELKIVDLETHQPLPQGKRGLVMAKGPQIMQGYYLNPEATSKAIDSEGWFDTGDI 502
Query: 326 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 385
GW+ P + +VL GRAKDTIVL+ GEN+EP +E+A LRS I QI+++GQ
Sbjct: 503 GWLTPDNQ----------IVLTGRAKDTIVLTNGENIEPQPIEDACLRSDYIDQIMLVGQ 552
Query: 386 DQRRPGAIIVPDKE--EVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTS-----KC 438
DQ+ GA+IVPD E E + +K IV+ + L+ + L+ EL + +
Sbjct: 553 DQKSLGALIVPDLEILESWLLSKNQPIVNGEIG-LNNQMIRDLIREELNREVRDRKGYRR 611
Query: 439 SFQIGPIHVVDEPFTV 454
+I ++ EPFT+
Sbjct: 612 DDEIIVFEIIPEPFTI 627
>gi|186686430|ref|YP_001869626.1| AMP-dependent synthetase and ligase [Nostoc punctiforme PCC 73102]
gi|186468882|gb|ACC84683.1| AMP-dependent synthetase and ligase [Nostoc punctiforme PCC 73102]
Length = 649
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 188/451 (41%), Positives = 279/451 (61%), Gaps = 26/451 (5%)
Query: 14 GKHYKYETI--GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLS 71
GK++ + + D +AT +YTSGTTG PKGVML++ NL+HQI + ++ GD LS
Sbjct: 186 GKNHNFVPVKQNRDALATLIYTSGTTGRPKGVMLSYSNLMHQITTFGTVLQPNAGDIVLS 245
Query: 72 MLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
+LP WH YER Y++ S+G +YT +R++K DL++++P+YM+ VP ++E++Y G+QKQ
Sbjct: 246 ILPSWHSYERTVEYYLLSQGCTQIYTNLRSVKGDLRQFKPNYMVGVPRLWESIYEGVQKQ 305
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
A ++ + L+ IS Y +R+ +G L + + I+ L A+I A L
Sbjct: 306 FREQPAKKQRLINFLLGISDKYIKARRVAQGLDLN------NLHASAIERLTAKIQAAAL 359
Query: 192 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
PLH L E+LVY K++ A G K +SGGG+LP HID F+E IGV++ GYGLTE+SPV
Sbjct: 360 LPLHALGERLVYAKVREATGGHVKQMISGGGALPRHIDNFFEIIGVQILQGYGLTETSPV 419
Query: 251 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSAT 310
RRP N++G+ G P+ TE KIVD ET LP +G+V +RG Q+MQGY++NP AT
Sbjct: 420 THVRRPWRNLIGASGLPLPATEAKIVDPETKAPLPIEKRGLVLLRGPQIMQGYYQNPEAT 479
Query: 311 KQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA 370
+A+D +GW ++GD+GW+ P LVL GRAKDTIVL+ GEN+EP +E+A
Sbjct: 480 AKAIDAEGWFDSGDLGWLTPQDD----------LVLTGRAKDTIVLTNGENIEPQPIEDA 529
Query: 371 ALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI--SLLY 428
LRS I QI+++GQDQR GA+IVP+ E + A+ + + ++ E + L
Sbjct: 530 CLRSPYIDQIMLVGQDQRSLGALIVPNVEALEKWAQNDPATSSPSQKIDLESRMIQDLFR 589
Query: 429 GELRKWTS-----KCSFQIGPIHVVDEPFTV 454
EL + + +IG ++ EPF++
Sbjct: 590 QELNREVQNRPGYRPDDRIGTFKLILEPFSI 620
>gi|383321357|ref|YP_005382210.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383324527|ref|YP_005385380.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383490411|ref|YP_005408087.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384435677|ref|YP_005650401.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803]
gi|339272709|dbj|BAK49196.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803]
gi|359270676|dbj|BAL28195.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359273847|dbj|BAL31365.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359277017|dbj|BAL34534.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803
substr. PCC-P]
Length = 636
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 183/407 (44%), Positives = 252/407 (61%), Gaps = 19/407 (4%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+D+AT +YTSGTTG PKGVML+H NLLHQ+R L ++ GD+ LS+LP WH ER+
Sbjct: 178 EDLATLIYTSGTTGQPKGVMLSHGNLLHQVRELDSVIIPRPGDQVLSILPCWHSLERSAE 237
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
YF+ SRG + YT++R+ K D++ +PH+++ VP ++E+LY G+QK S ++ +
Sbjct: 238 YFLLSRGCTMNYTSIRHFKGDVKDIKPHHIVGVPRLWESLYEGVQKTFREKSPGQQKLIN 297
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
IS Y KRI L N S + L+ AR +L PLH L +K+VY
Sbjct: 298 FFFGISQKYILAKRIANNLSL--NHLHASAIARLV----ARCQALVLSPLHYLGDKIVYH 351
Query: 205 KI-QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K+ Q+A G + +SGGG+L H+D FYE + V VGYGLTE++PV AR N+ S
Sbjct: 352 KVRQAAGGRLETLISGGGALARHLDDFYEITSIPVLVGYGLTETAPVTNARVHKHNLRYS 411
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
G PI TEI+IVD ET E LP ++G+V +RG QVMQGY+ P AT + LD++GW ++G
Sbjct: 412 SGRPIPFTEIRIVDMETKEDLPPETQGLVLIRGPQVMQGYYNKPEATAKVLDQEGWFDSG 471
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+GW+ P + L+L GRAKDTIVLS GENVEP +E+A LRS+ I QI+++
Sbjct: 472 DLGWVTPQND----------LILTGRAKDTIVLSNGENVEPQPIEDACLRSAYIDQIMLV 521
Query: 384 GQDQRRPGAIIVP--DKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
GQDQ+ GA+IVP D + K L I + S S+ S LY
Sbjct: 522 GQDQKSLGALIVPNFDALQKWAETKNLQITVPEPSASSEGMQASGLY 568
>gi|307154624|ref|YP_003890008.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 7822]
gi|306984852|gb|ADN16733.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 7822]
Length = 637
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 189/445 (42%), Positives = 272/445 (61%), Gaps = 33/445 (7%)
Query: 27 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 86
+AT +YTSGTTG PKGVML+H NLLHQI + + E GD+ LS+LP WH YER Y+
Sbjct: 180 LATLIYTSGTTGKPKGVMLSHGNLLHQIINFGTVFQPEPGDRVLSILPSWHSYERTVEYY 239
Query: 87 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 146
+ S+G+ +YT +R+ K+DL+R+QPH M+ VP ++E++Y GIQKQ +A ++ +
Sbjct: 240 VLSQGVTQIYTNLRSFKNDLKRFQPHLMVGVPRLWESVYEGIQKQFREQNANKQKLVNFF 299
Query: 147 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 206
++ S Y +RI L S + L A++ A+L PLH L ++L+Y+K+
Sbjct: 300 LKQSENYILAQRIANNLSLNHLNASAS------ERLQAKLKAALLAPLHALGDRLIYEKV 353
Query: 207 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 265
+ +G + KA +SGGGSL HID FYE + + V VGYGLTE+SPV R N+ GS G
Sbjct: 354 REGVGKNVKAWISGGGSLARHIDTFYEIVNIPVLVGYGLTETSPVTNVRTLERNLRGSCG 413
Query: 266 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 325
P+ +TEI+IVD ET + LP +G+V +RG QVMQGY+K P AT + +D GW ++GD+
Sbjct: 414 TPLRYTEIRIVDPETRQELPVEQQGLVLIRGPQVMQGYYKKPEATAKVIDPQGWFDSGDL 473
Query: 326 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 385
GW+ P + LV+ GRAKDTIVLS GEN+EP +E+A +RS I QI+++GQ
Sbjct: 474 GWVTPMND----------LVISGRAKDTIVLSNGENIEPQPIEDACVRSPYIDQIMLVGQ 523
Query: 386 DQRRPGAIIVPDKEEVLMAAKR-----------LSIVHADASELSKEKTISLLYGELRKW 434
DQ+ GA+IVP+ + + AK+ SI AS LS + +LL EL +
Sbjct: 524 DQKALGALIVPNLDALQTWAKQQQLDLEIPGPEASIEEIHASSLSSKPVQNLLRQELNRL 583
Query: 435 TS-----KCSFQIGPIHVVDEPFTV 454
+ QI ++ EPF++
Sbjct: 584 VKDRPGYRADDQIKEFELILEPFSI 608
>gi|16329616|ref|NP_440344.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803]
gi|1652099|dbj|BAA17024.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803]
Length = 696
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 183/407 (44%), Positives = 252/407 (61%), Gaps = 19/407 (4%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+D+AT +YTSGTTG PKGVML+H NLLHQ+R L ++ GD+ LS+LP WH ER+
Sbjct: 238 EDLATLIYTSGTTGQPKGVMLSHGNLLHQVRELDSVIIPRPGDQVLSILPCWHSLERSAE 297
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
YF+ SRG + YT++R+ K D++ +PH+++ VP ++E+LY G+QK S ++ +
Sbjct: 298 YFLLSRGCTMNYTSIRHFKGDVKDIKPHHIVGVPRLWESLYEGVQKTFREKSPGQQKLIN 357
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
IS Y KRI L N S + L+ AR +L PLH L +K+VY
Sbjct: 358 FFFGISQKYILAKRIANNLSL--NHLHASAIARLV----ARCQALVLSPLHYLGDKIVYH 411
Query: 205 KI-QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K+ Q+A G + +SGGG+L H+D FYE + V VGYGLTE++PV AR N+ S
Sbjct: 412 KVRQAAGGRLETLISGGGALARHLDDFYEITSIPVLVGYGLTETAPVTNARVHKHNLRYS 471
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
G PI TEI+IVD ET E LP ++G+V +RG QVMQGY+ P AT + LD++GW ++G
Sbjct: 472 SGRPIPFTEIRIVDMETKEDLPPETQGLVLIRGPQVMQGYYNKPEATAKVLDQEGWFDSG 531
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+GW+ P + L+L GRAKDTIVLS GENVEP +E+A LRS+ I QI+++
Sbjct: 532 DLGWVTPQND----------LILTGRAKDTIVLSNGENVEPQPIEDACLRSAYIDQIMLV 581
Query: 384 GQDQRRPGAIIVP--DKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
GQDQ+ GA+IVP D + K L I + S S+ S LY
Sbjct: 582 GQDQKSLGALIVPNFDALQKWAETKNLQITVPEPSASSEGMQASGLY 628
>gi|407957499|dbj|BAM50739.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803]
Length = 609
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 183/407 (44%), Positives = 252/407 (61%), Gaps = 19/407 (4%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+D+AT +YTSGTTG PKGVML+H NLLHQ+R L ++ GD+ LS+LP WH ER+
Sbjct: 151 EDLATLIYTSGTTGQPKGVMLSHGNLLHQVRELDSVIIPRPGDQVLSILPCWHSLERSAE 210
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
YF+ SRG + YT++R+ K D++ +PH+++ VP ++E+LY G+QK S ++ +
Sbjct: 211 YFLLSRGCTMNYTSIRHFKGDVKDIKPHHIVGVPRLWESLYEGVQKTFREKSPGQQKLIN 270
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
IS Y KRI L N S + L+ AR +L PLH L +K+VY
Sbjct: 271 FFFGISQKYILAKRIANNLSL--NHLHASAIARLV----ARCQALVLSPLHYLGDKIVYH 324
Query: 205 KI-QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K+ Q+A G + +SGGG+L H+D FYE + V VGYGLTE++PV AR N+ S
Sbjct: 325 KVRQAAGGRLETLISGGGALARHLDDFYEITSIPVLVGYGLTETAPVTNARVHKHNLRYS 384
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
G PI TEI+IVD ET E LP ++G+V +RG QVMQGY+ P AT + LD++GW ++G
Sbjct: 385 SGRPIPFTEIRIVDMETKEDLPPETQGLVLIRGPQVMQGYYNKPEATAKVLDQEGWFDSG 444
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+GW+ P + L+L GRAKDTIVLS GENVEP +E+A LRS+ I QI+++
Sbjct: 445 DLGWVTPQND----------LILTGRAKDTIVLSNGENVEPQPIEDACLRSAYIDQIMLV 494
Query: 384 GQDQRRPGAIIVP--DKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
GQDQ+ GA+IVP D + K L I + S S+ S LY
Sbjct: 495 GQDQKSLGALIVPNFDALQKWAETKNLQITVPEPSASSEGMQASGLY 541
>gi|428222525|ref|YP_007106695.1| AMP-forming long-chain acyl-CoA synthetase [Synechococcus sp. PCC
7502]
gi|427995865|gb|AFY74560.1| AMP-forming long-chain acyl-CoA synthetase [Synechococcus sp. PCC
7502]
Length = 624
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 170/386 (44%), Positives = 249/386 (64%), Gaps = 17/386 (4%)
Query: 13 AGKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM 72
A K I +AT +YTSGT GNPKGVML+H NLL+QI D+ E K +S+
Sbjct: 164 ASKDLGNPEITPKHLATLIYTSGTGGNPKGVMLSHGNLLYQINGALDVFVVEPSKKVMSI 223
Query: 73 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
LP WH YER+ Y+IFS+G +YT +R++K DL+ +Q +YM++VP ++E++Y G+QKQ
Sbjct: 224 LPTWHSYERSFEYYIFSQGCTQIYTNLRSIKKDLKDFQANYMVAVPRLWESIYEGVQKQF 283
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
A+++ + ++S AY +RI++G L + L + L A + L
Sbjct: 284 REQPASKQKLINFFFKVSLAYIKARRIWQGLDLE------NLAPTLGEKLIAGLTMLALT 337
Query: 193 PLHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
P+HLL ++LVYKK++ A G + VSGGGS+ +H++ FYE + + + GYGLTE+SP+
Sbjct: 338 PVHLLGDRLVYKKVREATGGCLELVVSGGGSIALHLEDFYEIVNIPILSGYGLTETSPIT 397
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 311
RRP N+ G P+ TE KI+D T + +PA +GIV +RG Q+MQGY+KNP+AT
Sbjct: 398 HTRRPHRNIRNGDGQPLPKTETKIIDQITRQSVPAYCQGIVTLRGPQIMQGYYKNPTATA 457
Query: 312 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 371
+A+D +GW ++GD+G++ P LV+ GRAKDTIVLS GEN+EP +E+A
Sbjct: 458 KAIDPEGWFDSGDLGYVTPWDD----------LVITGRAKDTIVLSNGENIEPQAIEDAC 507
Query: 372 LRSSLIRQIVVIGQDQRRPGAIIVPD 397
LRS I QI+V+GQDQ++ GA+IVP+
Sbjct: 508 LRSPFIDQIIVVGQDQKQLGALIVPN 533
>gi|451813776|ref|YP_007450228.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803]
gi|451779745|gb|AGF50714.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803]
Length = 696
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 185/447 (41%), Positives = 263/447 (58%), Gaps = 33/447 (7%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+D+AT +YTSGTTG PKGVML+H NLLHQ+R L ++ GD+ LS+LP WH ER+
Sbjct: 238 EDLATLIYTSGTTGQPKGVMLSHGNLLHQVRELDSVIIPRPGDQVLSILPCWHSLERSAE 297
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
YF+ SRG + YT++R+ K D++ +PH+++ VP ++E+LY G+QK S ++ +
Sbjct: 298 YFLLSRGCTMNYTSIRHFKGDVKDIKPHHIVGVPRLWESLYEGVQKTFREKSPGQQKLIN 357
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
IS Y KRI L N S + L+ AR +L PLH L +K+VY
Sbjct: 358 FFFGISQKYILAKRIANNLSL--NHLHASAIARLV----ARCQALVLSPLHYLGDKIVYH 411
Query: 205 KI-QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K+ Q+A G + +SGGG+L H+D FYE + V VGYGLTE++PV AR N+ S
Sbjct: 412 KVRQAAGGRLETLISGGGALARHLDDFYEITSIPVLVGYGLTETAPVTNARVHKHNLRYS 471
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
G PI TEI+IVD ET E LP ++G+V +RG QVMQGY+ P AT + LD++GW ++G
Sbjct: 472 SGRPIPFTEIRIVDMETKEDLPPETQGLVLIRGPQVMQGYYNKPEATAKVLDQEGWFDSG 531
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+GW+ P + L+L GRAKDTIVLS GENVEP +E+A LRS+ I QI+++
Sbjct: 532 DLGWVTPQND----------LILTGRAKDTIVLSNGENVEPQPIEDACLRSAYIDQIMLV 581
Query: 384 GQDQRRPGAIIVPD-----------KEEVLMAAKRLSIVHADASELSKEKTISLLYGELR 432
GQDQ+ GA+IVP+ ++ + S AS L + + L+ EL
Sbjct: 582 GQDQKSLGALIVPNFDALQKWAETKNSQITVPEPSASSEGMQASGLYDPQVVGLMRSELH 641
Query: 433 KWTS-----KCSFQIGPIHVVDEPFTV 454
+ + QI + PF++
Sbjct: 642 REVRDRPGYRADDQIKDFRFIPAPFSL 668
>gi|443475739|ref|ZP_21065678.1| Long-chain-fatty-acid--CoA ligase [Pseudanabaena biceps PCC 7429]
gi|443019402|gb|ELS33497.1| Long-chain-fatty-acid--CoA ligase [Pseudanabaena biceps PCC 7429]
Length = 625
Score = 337 bits (864), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 181/446 (40%), Positives = 270/446 (60%), Gaps = 32/446 (7%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I D +AT +YTSGTT PKGVMLTH N L +I ++ + +K LS+LP WH YER
Sbjct: 171 IQRDTLATLIYTSGTTARPKGVMLTHGNFLFEIEGAQAVLKLKVSEKVLSILPTWHSYER 230
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
YFIFS+G +YT +R +K DL+ ++P YM++VP ++E++Y G+QKQ +++
Sbjct: 231 TFEYFIFSQGCTQIYTNLRTIKKDLREHKPDYMVAVPRLWESIYEGVQKQFREQPNSKQR 290
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
+ ++ S Y KR+ +G + PS L D L A +I LW +H L KL
Sbjct: 291 LVDFFLKASQKYITAKRVIQGLNVA--NLSPS----LGDKLKASVIVLSLWAVHKLGHKL 344
Query: 202 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
VY+K++ A G + K VSGGGS+ H++ FYE +G+++ GYGLTE+SP+ RRP N+
Sbjct: 345 VYQKVREATGGNFKYIVSGGGSIAEHLEDFYEIVGIEILGGYGLTETSPITHVRRPNRNI 404
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
G G P+ TE +IVD + LP G +G+V +RG QVMQGY+KNP AT +A+D GW
Sbjct: 405 RGGDGQPLIKTETRIVDISSRADLPVGQQGLVLIRGPQVMQGYYKNPEATAKAIDPQGWF 464
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
+TGD+G+++P + L++ GRAKDTIVLS GEN+EP +E+A +RS+ I Q+
Sbjct: 465 DTGDLGYVSPWND----------LIITGRAKDTIVLSNGENIEPQPIEDACIRSNYIDQV 514
Query: 381 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADAS------ELSKEKTISLLYGELRKW 434
V++GQDQ++ G +IVP+ L A + ++ D++ L+ K SL E+ +
Sbjct: 515 VLVGQDQKQLGLLIVPN----LSALEAAGLIAPDSNLADILPALNDPKIRSLYREEINRE 570
Query: 435 TSK-----CSFQIGPIHVVDEPFTVN 455
+ +IG + EPFT++
Sbjct: 571 VQNRPGYSVNDRIGVFEFLPEPFTID 596
>gi|443312969|ref|ZP_21042583.1| AMP-forming long-chain acyl-CoA synthetase [Synechocystis sp. PCC
7509]
gi|442777119|gb|ELR87398.1| AMP-forming long-chain acyl-CoA synthetase [Synechocystis sp. PCC
7509]
Length = 629
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 180/436 (41%), Positives = 269/436 (61%), Gaps = 23/436 (5%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+D+AT +YTSGT+G PKGVML+ NLL Q+ +V + G+ +S+LP WH YER+
Sbjct: 182 EDLATLMYTSGTSGQPKGVMLSQGNLLSQVFGASAVVEPQPGEVVMSILPIWHCYERSFE 241
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
YFI + G +YT +R +K D + ++P YM+ VP ++E++Y G+QKQ SA ++ +
Sbjct: 242 YFILAHGCTQIYTNIRYVKKDFKEFKPFYMVGVPRLWESIYEGVQKQFREQSANKQKLIN 301
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
S Y +R+ +G L N PS L L WARI L +H LA+K++YK
Sbjct: 302 FFFAQSQRYIMARRVVQGLDL--NNLYPSSLAKL----WARIQIIPLGLIHQLADKIIYK 355
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
+++ A G K VSGGGS+ H++ FYE +GV + GYGLTE+SP+ RR N+ G+
Sbjct: 356 QVREATGGKVKFLVSGGGSIAEHLEDFYEIVGVDILGGYGLTETSPITHVRRTWRNLRGA 415
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
G P+ TE +IV+ E+++ LP G KG+V +RGSQVMQGY+KNP AT +A++ +GW NTG
Sbjct: 416 DGQPLPDTETQIVELESHKPLPVGKKGLVMIRGSQVMQGYYKNPEATAKAINSEGWFNTG 475
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+GW++ + LV+ GRAKDTIVLS GEN+EP +E A LRS I QI+++
Sbjct: 476 DLGWVSKQND----------LVITGRAKDTIVLSNGENIEPQPIENACLRSPYIDQIMLV 525
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGEL-RKWTSKCSF-- 440
GQD+R GA+IVP+++ + A + D S L + + L E+ R+ ++ +
Sbjct: 526 GQDERSLGALIVPNQDALQQWATTQNPA-IDPSNLGNKAILDLYRLEVSREVQNRPGYRP 584
Query: 441 --QIGPIHVVDEPFTV 454
+I ++ EPF++
Sbjct: 585 DERISTFKLIAEPFSI 600
>gi|302835167|ref|XP_002949145.1| hypothetical protein VOLCADRAFT_120723 [Volvox carteri f.
nagariensis]
gi|300265447|gb|EFJ49638.1| hypothetical protein VOLCADRAFT_120723 [Volvox carteri f.
nagariensis]
Length = 643
Score = 333 bits (855), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 189/406 (46%), Positives = 259/406 (63%), Gaps = 25/406 (6%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+ DD+AT VYTSGTTG+PKGVMLTH NL +Q+R+L + + GD+ LS+LPPWH+YER
Sbjct: 180 VSPDDLATLVYTSGTTGHPKGVMLTHGNLTYQVRNLSYFLAVQPGDRVLSLLPPWHIYER 239
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
C YF+ SRG + +YT +R L+DDL + P + + VPLV +TL++ +++++ R
Sbjct: 240 TCSYFVLSRGGQQVYTNIRRLRDDLTAFTPDHFVCVPLVLDTLHARVRQRLAAGPRHRAA 299
Query: 142 VARALIRISFAYT----AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW----- 192
+A AL+ AY A + +G T A + WA+I+ A +
Sbjct: 300 IATALLAAGAAYHALPPADRGTSDGLVAT---------AAGLARRWAQILGAAVLAALLT 350
Query: 193 PLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
PLH LA KLVY KI+ A+GI K VSGGGSL H+D FYEA+G+ V G+GLTE+SPV+A
Sbjct: 351 PLHWLASKLVYGKIREALGIRKTVVSGGGSLAAHLDDFYEALGLPVLNGWGLTETSPVLA 410
Query: 253 ARR---PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
RR P N+ GSVG P T++++VD ET + LP G +G+V G VM GYF + A
Sbjct: 411 CRRSDPPEQNIRGSVGVPTPGTQLRVVDPETLDPLPEGRQGLVLANGPGVMAGYFLDEEA 470
Query: 310 TKQALDE-DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 368
T +A DGW +TGD+GW+AP G RC G LVL GRAKDTIVLS+G+NVEP +E
Sbjct: 471 TARAFRAGDGWFDTGDLGWVAPTGVTG--SRCAGHLVLTGRAKDTIVLSSGKNVEPQPIE 528
Query: 369 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 414
+A S LI+ +V++GQD+R GA++ PD E+ L A S+ A+
Sbjct: 529 DAVAASGLIKHVVLVGQDKRELGALVWPD-EDALSATPENSLSPAE 573
>gi|254431287|ref|ZP_05044990.1| long-chain-fatty-acid--CoA ligase [Cyanobium sp. PCC 7001]
gi|197625740|gb|EDY38299.1| long-chain-fatty-acid--CoA ligase [Cyanobium sp. PCC 7001]
Length = 663
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 165/377 (43%), Positives = 243/377 (64%), Gaps = 20/377 (5%)
Query: 27 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 86
+AT +YTSGTTG PKGV LTH NLLHQ+R L V GD+ +S+LP WH YER+ YF
Sbjct: 220 LATILYTSGTTGQPKGVPLTHANLLHQLRHLGVAVTPHPGDRVVSVLPIWHSYERSAEYF 279
Query: 87 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 146
+ + G YT +++L+ DLQR +PHY+ISVP ++E + SG + + +R+ + RA
Sbjct: 280 LLACGCHQSYTTLKHLRPDLQRVRPHYLISVPRLWEAILSGFEDALRAMPTSRQRLLRAA 339
Query: 147 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 206
+ S A +R L R++ P+ + A ++ L + WPLH LAE +++ K+
Sbjct: 340 LANSRAQALARRRARDLTL-RHEPLPTRVCAAVEAL-------LRWPLHRLAEAVLWPKV 391
Query: 207 QSAI--GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 264
+S + G + +SGGG+L +H+D F+EAIG+++ VGYGLTE+SPV+ RRP N GS
Sbjct: 392 RSQLVGGRLRTAISGGGALALHVDAFFEAIGIELLVGYGLTETSPVLTCRRPWANRRGSA 451
Query: 265 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 324
G P+ T I+I D ET++ + G +G+V RG QVM GY++ P A+ + LD +GW +TGD
Sbjct: 452 GQPLPGTAIRIADPETHQPVAVGRRGLVLARGPQVMGGYWRKPEASAKVLDGEGWFDTGD 511
Query: 325 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 384
+G + P G LVL GRAKDTIVLS+GEN+EP LE+A + S LI Q++++G
Sbjct: 512 LGHLLPD----------GSLVLTGRAKDTIVLSSGENIEPGPLEDALVASPLIEQVMLVG 561
Query: 385 QDQRRPGAIIVPDKEEV 401
QD+++ G ++VP E +
Sbjct: 562 QDRKQLGGLLVPRPEAL 578
>gi|352096361|ref|ZP_08957241.1| AMP-dependent synthetase and ligase [Synechococcus sp. WH 8016]
gi|351677055|gb|EHA60206.1| AMP-dependent synthetase and ligase [Synechococcus sp. WH 8016]
Length = 648
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 179/412 (43%), Positives = 252/412 (61%), Gaps = 26/412 (6%)
Query: 31 VYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSR 90
+YTSGTTG PKGV LTH NLLHQ+RSL + E G LS+LP WH YER+ Y+ FS
Sbjct: 205 LYTSGTTGQPKGVPLTHANLLHQMRSLSCVARPEPGAPVLSVLPIWHAYERSAEYYFFSC 264
Query: 91 GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRIS 150
YT ++ LK DL R +P M++VP ++E + +G + + T A+R+ + RA + S
Sbjct: 265 ACSQSYTTIKQLKRDLPRVKPVVMVTVPRLWEAVQAGFEDVLKTFPASRQRLLRAALANS 324
Query: 151 FAYTAFKRIYEGFCLTRNQKQPSYLVAL--IDWLWARIICAILWPLHLLAEKLVYKKI-- 206
AY CL R Q++ L+ L + AR+ A WP H LA KL++ K+
Sbjct: 325 SAY----------CLARRQRRNLMLMPLGRRQRMMARLKSAGRWPAHALASKLIWPKLRL 374
Query: 207 QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 266
Q + G + ++GGG++ H+D F+EA+G+++ VGYGLTE+SPV++ RRP N+ GS G
Sbjct: 375 QLSGGQLRFPINGGGAIAPHVDSFFEAVGIELLVGYGLTETSPVVSCRRPWRNIRGSSGQ 434
Query: 267 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG 326
P+ TE +IVDAET + L G+V VRG QVM GY + P AT + LD DGW +TGD+G
Sbjct: 435 PLPDTEFRIVDAETRQPLGFRECGVVLVRGPQVMAGYLRRPEATAKVLDADGWFDTGDLG 494
Query: 327 WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD 386
+ P G +VL GRAKDTIVLS+GEN+EP LEE + S LI Q++++GQD
Sbjct: 495 MLLPD----------GSVVLTGRAKDTIVLSSGENIEPAPLEEELVSSPLIEQVMLVGQD 544
Query: 387 QRRPGAIIVPDKEEVLM-AAKRLSIVHADASELSKEKTI-SLLYGELRKWTS 436
QR+ A++VP E +L A++ + AD ++ + LL GEL + S
Sbjct: 545 QRQLAALVVPRLEAMLAWGAEQGLRLPADLGGTPGDQDLRRLLRGELNRLLS 596
>gi|449019989|dbj|BAM83391.1| long-chain-fatty-acid CoA ligase [Cyanidioschyzon merolae strain
10D]
Length = 824
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 160/384 (41%), Positives = 248/384 (64%), Gaps = 27/384 (7%)
Query: 27 IATYVYTSGTTGNPKGVMLTHKNLLHQI------RSLYDIVPAEN---GDKFLSMLPPWH 77
+AT VYTSGTTG PKG MLTH+NLLHQI R+ ++P+++ GD +++LP WH
Sbjct: 340 LATLVYTSGTTGQPKGAMLTHRNLLHQIMANSFSRAWRPLLPSQDASAGDVMVNILPCWH 399
Query: 78 VYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
++ER + SRG+ ++Y+ + + K+DL R++PH ++ VP +YE++Y GI+ Q+
Sbjct: 400 IFERIGELYALSRGVSMVYSKLLHFKEDLARHRPHLLVGVPRLYESIYQGIKSQLMKQGR 459
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
RR + L+ IS + ++RI +G R+ V+ ++ ++A + +LWPLH+L
Sbjct: 460 FRRALIFGLLGISTRFVQWRRIRDGALFDRH-------VSTLERIYAGLWTLLLWPLHML 512
Query: 198 AEKLVYKKIQSAI--GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
A + +++++ G + VSGGGSL M +D F+EAIGV + VGYGLTE+SPV+A R
Sbjct: 513 ANLIAWRQLRRMALGGRVRTLVSGGGSLAMFLDDFFEAIGVLLIVGYGLTETSPVLANRL 572
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
N+ G+ G + T++KIVD ET + LP G GI+ RG Q+ QGY+K+P+AT + +D
Sbjct: 573 REHNIRGTTGLVVPGTQVKIVDPETRQTLPPGQTGIICARGEQIFQGYYKDPAATARVID 632
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
+G+ +TGD+G+ + + G LV+ GR KD IVL+ GEN+EP +E+A L S
Sbjct: 633 SEGYFDTGDLGFFSQYT---------GDLVIAGRLKDVIVLNNGENIEPTPIEDAMLGSD 683
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKE 399
I Q++++GQDQR GA+IVP+ E
Sbjct: 684 YIDQVMLVGQDQRALGALIVPNLE 707
>gi|427702586|ref|YP_007045808.1| AMP-forming long-chain acyl-CoA synthetase [Cyanobium gracile PCC
6307]
gi|427345754|gb|AFY28467.1| AMP-forming long-chain acyl-CoA synthetase [Cyanobium gracile PCC
6307]
Length = 653
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 180/440 (40%), Positives = 260/440 (59%), Gaps = 31/440 (7%)
Query: 27 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 86
+AT +YTSGTTG PKGV L+H NLLHQ+R+L V GD LS+LP WH YER YF
Sbjct: 200 LATLLYTSGTTGQPKGVPLSHANLLHQLRTLGVAVSPSPGDHVLSVLPIWHAYERTAEYF 259
Query: 87 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 146
+ S G YT ++ L+ DLQ+ +P Y+ISVP ++E L SG + + +R+ + R
Sbjct: 260 LLSCGCRQTYTTLKQLRSDLQKVRPQYLISVPRLWEALLSGFEDALAAMPPSRQRLLRRA 319
Query: 147 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 206
+ +S A+ +R L +P V D L A +LWPLH A L++ K+
Sbjct: 320 LAVSRAFHRRRRTALDLTL-----KP---VGAADRLVAAAGALLLWPLHGAAGALLWPKV 371
Query: 207 QSAI--GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 264
++ + G + +SGGG+L +H+D F+EA+G+++ VGYGLTE+SPV+A RRP N GS
Sbjct: 372 RAQLVGGRLRTAISGGGALAIHVDGFFEAVGIELLVGYGLTETSPVLACRRPWSNRRGSA 431
Query: 265 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 324
G P+ T +K+VD T LP G +G+V RG QVM GY P AT + LD +GW +TGD
Sbjct: 432 GQPLPDTALKVVDPATRTPLPVGERGLVLARGPQVMGGYHNKPEATAKVLDGEGWFDTGD 491
Query: 325 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 384
+G + G LVL GRAKDTIVLS+GEN+EP LEEA + S L+ Q++++G
Sbjct: 492 LGLLL----------ADGTLVLTGRAKDTIVLSSGENIEPGPLEEALVASPLVEQVMLVG 541
Query: 385 QDQRRPGAIIVPDKEEVLMA-AKRLSIVHADASELSKEKTISLLYGELRKWT-------- 435
QD+++ GA++VP K EVL A A + D + +LL R+
Sbjct: 542 QDRKQLGALVVP-KAEVLQAFAATAQLPCPDPGDPGAGADPALLRALCRECNRLLAARPG 600
Query: 436 SKCSFQIGPIHVVDEPFTVN 455
++ ++G + +V EPF+++
Sbjct: 601 TRADERLGGVALV-EPFSID 619
>gi|317969072|ref|ZP_07970462.1| long-chain acyl-CoA synthetase [Synechococcus sp. CB0205]
Length = 638
Score = 313 bits (803), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 168/398 (42%), Positives = 243/398 (61%), Gaps = 20/398 (5%)
Query: 23 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERA 82
G + +AT +YTSGTTG PKGV L+H NLL Q+RSL V GD+ LS+LP WH YER+
Sbjct: 195 GEERLATVLYTSGTTGRPKGVPLSHANLLQQLRSLGVAVAPRPGDRVLSVLPIWHAYERS 254
Query: 83 CGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
YF+ S G + YT +++L+ DLQR +PHY+ISVP ++E L SG + + A+R +
Sbjct: 255 AEYFLLSCGCQQTYTTLKHLRPDLQRVRPHYLISVPRLWEALLSGFEDALSAMPASRAKL 314
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
R+ +++S + +R+ L +K+ A + WPLH +AE+L
Sbjct: 315 LRSALKVSRFHCLSRRVAADRTLIPERKRRRLAAA--------AGALLSWPLHGVAEQLF 366
Query: 203 YKKIQSAI--GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
+ K+++ + G + +SGGG+L +H+D F+EAIG+++ VGYGLTE+SPV+ RR N
Sbjct: 367 WPKVRAQLIGGRLRTAISGGGALAIHVDGFFEAIGIELLVGYGLTETSPVLTCRRRWNNR 426
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
GS G P+ T IKI D E+ VL G +G V +G+QVM GY P AT + LD +GW
Sbjct: 427 RGSSGQPLAGTSIKITDPESGAVLAIGERGKVLAKGAQVMGGYLGKPEATAKVLDAEGWF 486
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
+TGD+G + G LVL GRAKDTIVLS+GEN+EP LEE + SL+ Q+
Sbjct: 487 DTGDLGHLL----------ADGTLVLTGRAKDTIVLSSGENIEPGPLEECLVACSLVEQV 536
Query: 381 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 418
+++GQD++ GA++VP E + A + AD + L
Sbjct: 537 MLVGQDRKALGALVVPKLENLEAFAAEQGMSAADPALL 574
>gi|148242895|ref|YP_001228052.1| long-chain acyl-CoA synthetase [Synechococcus sp. RCC307]
gi|147851205|emb|CAK28699.1| Long-chain acyl-CoA synthetase [Synechococcus sp. RCC307]
Length = 650
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 163/373 (43%), Positives = 226/373 (60%), Gaps = 22/373 (5%)
Query: 27 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 86
+AT +YTSGTTG PKGV L+ NLLHQ+R+L V + G++ LS+LP WH YER+ GY
Sbjct: 199 LATILYTSGTTGRPKGVPLSQANLLHQVRTLGVAVSPQPGERVLSVLPIWHAYERSAGYL 258
Query: 87 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 146
+ SRG YT +R K DLQR +PHY+ISVP ++E LY G Q + A+++ + R
Sbjct: 259 LLSRGCSQSYTNLRQFKGDLQRVRPHYLISVPRLWEALYGGFQGALEGMPASKQKLLRTA 318
Query: 147 IRISFAYTAFKRIYEGFC---LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
+ S + R + L +++ +A + W+ A + +LWP
Sbjct: 319 LAASQTHARSLRQWRDLADHPLLWSERLAGLALAGLSWVPAALAGQLLWP---------A 369
Query: 204 KKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
+ Q A G +SGGG+LP HID F+EAIG+++ VGYGLTE+SPV++ RR N GS
Sbjct: 370 VRRQLAGGSLGTAISGGGALPKHIDAFFEAIGIELLVGYGLTETSPVLSCRRRWANRRGS 429
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
G P+ TE+KIVD ++ L G +G+V RG QVM+GY P AT + LD + W NTG
Sbjct: 430 AGRPLPGTELKIVDPDSRRTLQQGERGLVLARGPQVMKGYLNRPEATGEVLDTEAWFNTG 489
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+G + G L L GRAKDTIVLS+GEN+EP LE+ S L+ Q++V+
Sbjct: 490 DLGHLL----------ADGSLFLTGRAKDTIVLSSGENIEPGPLEDELAASELVEQVMVV 539
Query: 384 GQDQRRPGAIIVP 396
GQDQR+ GA++VP
Sbjct: 540 GQDQRQLGALVVP 552
>gi|87301166|ref|ZP_01084007.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp. WH
5701]
gi|87284134|gb|EAQ76087.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp. WH
5701]
Length = 653
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 174/441 (39%), Positives = 256/441 (58%), Gaps = 27/441 (6%)
Query: 23 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERA 82
G + +AT +YTSGTTG PKGV L+ NLLHQ+R+L V D+ LS+LP WH YER
Sbjct: 203 GPERLATLLYTSGTTGRPKGVPLSQANLLHQLRTLGVAVAPRPADRVLSVLPIWHAYERT 262
Query: 83 CGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
YF+ S G YT +++L+ DLQR +P YMISVP ++E L +G + + +R+ +
Sbjct: 263 AEYFLLSCGCRQSYTTLKHLRPDLQRVRPQYMISVPRLWEALLAGFEDALEAMPPSRQGL 322
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
R +R+S + +R L ++ P L A + WL + WP H LA L+
Sbjct: 323 IRQALRLSRWHGQSRRRALDLTL-ESESLPGRLAAGLGWL-------LSWPGHGLASVLL 374
Query: 203 YKKIQSAI--GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
+ K++ + G + +SGGG+L +H+D F+EAIG+++ VGYGLTE+SPV+A RRP N
Sbjct: 375 WPKVRQQLSGGALRTAISGGGALALHVDGFFEAIGIELLVGYGLTETSPVLACRRPWRNR 434
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
GS G P+ TE++IVD ++ L +G V RG QVM GYF P AT LD GW
Sbjct: 435 RGSAGQPLPETELRIVDPDSGAALGWRQRGRVLARGPQVMAGYFGKPEATAAVLDAAGWF 494
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
+TGD+G + G LVL GRAKDTIVLS+GEN+EP LEEA + L+ Q+
Sbjct: 495 DTGDLGHLL----------ADGTLVLTGRAKDTIVLSSGENIEPGPLEEALVAHPLVEQV 544
Query: 381 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGELRKW----- 434
+++GQD+R+ A++VP E + A+ + V ++ + + L GE +
Sbjct: 545 MLVGQDRRQLAALVVPRPEPLAAFARARELPVPGTTADPADRALLKALSGEFNRLLAARP 604
Query: 435 TSKCSFQIGPIHVVDEPFTVN 455
S+ ++ + +V EPF++
Sbjct: 605 GSRPDERLAGVALV-EPFSIE 624
>gi|318042187|ref|ZP_07974143.1| long-chain acyl-CoA synthetase [Synechococcus sp. CB0101]
Length = 644
Score = 307 bits (787), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 162/382 (42%), Positives = 235/382 (61%), Gaps = 22/382 (5%)
Query: 23 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERA 82
G +AT +YTSGTTG PKGV L+H NLLHQ+R L V + GD+ LS+LP WH YER+
Sbjct: 195 GEQRLATVLYTSGTTGQPKGVPLSHANLLHQLRHLGVAVAPQPGDRVLSVLPIWHAYERS 254
Query: 83 CGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
YF+ + G YT ++ L+ DLQR +PHY+ISVP ++E L G + + +AR+ +
Sbjct: 255 AEYFLLACGCAQTYTNLKQLRPDLQRVRPHYLISVPRLWEALLGGFEDALAAMPSARQKL 314
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL-WPLHLLAEKL 201
R+ + +S + +R+ L L A A+L WPLH LA ++
Sbjct: 315 LRSALGLSRYHCLSRRVAADRTLAPEPAGRRLLAA---------GGALLSWPLHGLASRV 365
Query: 202 VYKKIQSAI--GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
++ K++ + G + +SGGG+L +H+D F+EA+G+++ VGYGLTE+SPV+ RR N
Sbjct: 366 LWPKVRQQLIGGRLRTAISGGGALAIHVDGFFEAVGIELLVGYGLTETSPVLTCRRRWNN 425
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
GS G P+ T I+IVD E+ +L G +G V +G QVMQGY P AT + LD++GW
Sbjct: 426 RRGSSGQPLPGTAIRIVDPESGALLQIGQRGRVLAQGPQVMQGYLGKPEATAKVLDQEGW 485
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
+TGD+G + G LVL GRAKDTIVLS+GEN+EP LEE + +L+ Q
Sbjct: 486 FDTGDLGQLL----------ADGTLVLTGRAKDTIVLSSGENIEPGPLEECLVACTLVEQ 535
Query: 380 IVVIGQDQRRPGAIIVPDKEEV 401
++V+GQD++ GA++VP E +
Sbjct: 536 VMVVGQDRKALGALVVPKLEAL 557
>gi|254421740|ref|ZP_05035458.1| AMP-binding enzyme, putative [Synechococcus sp. PCC 7335]
gi|196189229|gb|EDX84193.1| AMP-binding enzyme, putative [Synechococcus sp. PCC 7335]
Length = 640
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 171/439 (38%), Positives = 259/439 (58%), Gaps = 31/439 (7%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
D AT +YTSGT+G PKGVMLT NLL QI +V K LS+LP WH YER+
Sbjct: 194 DRTATLMYTSGTSGMPKGVMLTQSNLLSQIAGASSVVNVGPEQKVLSILPIWHCYERSFE 253
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
YF+ S+G +YT +R +K D + + P YM++VP ++E++Y G+Q+Q + ++ + R
Sbjct: 254 YFVLSQGCTQIYTNIRTVKRDFKEHSPQYMVAVPRLWESIYDGVQRQFQSQPEGKQKLIR 313
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
+ Y +R G L + L A + A LWP++ + +++V+
Sbjct: 314 FFLEKGHEYITARRTLSGLRLDHLTSSTG------EKLAAALKLAYLWPIYQIGDRIVFS 367
Query: 205 KIQSAIGISKAG--VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
KI+ A+G K VSGGGS+ +++ FYE +G+ + GYGLTE+SP+ RRP N+ G
Sbjct: 368 KIREAMG-GKVDFLVSGGGSIADYLEDFYEVVGIPILGGYGLTETSPITHVRRPWRNLRG 426
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
+ G + TE IVD ET + +P G G+V +RG QVM+GY+KN AT +A+D +GW +T
Sbjct: 427 ADGQALPGTETAIVDPETRQPIPIGKPGLVLLRGPQVMKGYYKNAEATAKAIDSEGWFDT 486
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD+G + G L++ GRAKDTIVL+ GEN+EP +E A LRS + QI++
Sbjct: 487 GDLGRLTDW----------GDLIITGRAKDTIVLTNGENIEPTPVENACLRSPYVDQIML 536
Query: 383 IGQDQRRPGAIIVPDKE--EVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTS---- 436
+GQDQ+ GA+IVP+KE E A+K +S+ +L+ + L EL++ S
Sbjct: 537 VGQDQKSVGALIVPNKEVLEKWAASKGVSM-----EDLNSKPIQDLYKQELKREISARPG 591
Query: 437 -KCSFQIGPIHVVDEPFTV 454
+ ++GP +++EPFT+
Sbjct: 592 YRPDERVGPFVLLEEPFTI 610
>gi|87125603|ref|ZP_01081448.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp.
RS9917]
gi|86166903|gb|EAQ68165.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp.
RS9917]
Length = 648
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 179/437 (40%), Positives = 256/437 (58%), Gaps = 28/437 (6%)
Query: 28 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI 87
AT +YTSGTTG PKGV L+H NLLHQ+RSL + E G LS+LP WH YER+ Y+
Sbjct: 202 ATILYTSGTTGQPKGVPLSHGNLLHQMRSLACVARPEPGTPVLSVLPIWHAYERSAEYYF 261
Query: 88 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 147
FS YT ++ LK DL R +P M++VP ++E + +G + + T A+R+ + RA +
Sbjct: 262 FSCACSQSYTTIKQLKRDLPRVKPVVMVTVPRLWEAVQAGFEDVLKTFPASRQRLLRAAL 321
Query: 148 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI- 206
S AY +R L +P V D L AR WP H LA +L++ K+
Sbjct: 322 ANSSAYGLARRRSRNLML-----EP---VRRRDRLAARAEALRRWPAHALASRLIWPKLR 373
Query: 207 -QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 265
Q + G + ++GGG++ H+D F+EA+G+++ VGYGLTE+SPV++ RRP N+ GS G
Sbjct: 374 LQLSGGQLRYPINGGGAIAPHVDAFFEAVGIELLVGYGLTETSPVVSCRRPWHNIRGSSG 433
Query: 266 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 325
P+ TE +IVD ++ L +G+V VRG QVM GY P AT + LD DGW +TGD+
Sbjct: 434 LPMPDTEFRIVDPDSRAPLGFPQRGVVLVRGPQVMAGYLGKPEATAKVLDADGWFDTGDL 493
Query: 326 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 385
G + P G +VL GRAKDTIVLS+GEN+EP LEEA + S LI Q++++GQ
Sbjct: 494 GMLLPD----------GSVVLTGRAKDTIVLSSGENIEPGPLEEALVASDLIEQVMLVGQ 543
Query: 386 DQRRPGAIIVPDKE--EVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT-----SKC 438
D+R+ GA++VP E A + L + + + LL GEL + S+
Sbjct: 544 DERQLGALVVPRAEAMRAWAADQGLQLAEDLGGSPGDDNLLRLLRGELNRLLSQRPGSRA 603
Query: 439 SFQIGPIHVVDEPFTVN 455
++ I +V EPF++
Sbjct: 604 DERLAGIALV-EPFSIE 619
>gi|78184237|ref|YP_376672.1| long-chain-fatty-acid--CoA ligase [Synechococcus sp. CC9902]
gi|78168531|gb|ABB25628.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp.
CC9902]
Length = 645
Score = 303 bits (777), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 178/468 (38%), Positives = 269/468 (57%), Gaps = 35/468 (7%)
Query: 1 MLFSLPILTPVIAGKHYKYE-TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD 59
+L S L+PV ++ + I ++ +AT +YTSGTTG PKGV LTH NLLHQIRSL
Sbjct: 171 LLSSAAGLSPVTRTQNLDGDGKIAANQVATILYTSGTTGQPKGVPLTHANLLHQIRSLAC 230
Query: 60 IVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPL 119
+ + GD LS+LP WH YER+ YF S YT ++ LK DL R QP M +VP
Sbjct: 231 VAYPKPGDPVLSVLPIWHAYERSASYFFLSCACTQTYTTIKQLKKDLPRVQPIAMATVPR 290
Query: 120 VYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 179
++E++ +G + + T +R+ + RA + S A R + + ++ +
Sbjct: 291 LWESVQAGFEDVVKTFPPSRQRLLRAALSNSSAQRQALR-----------RASNLMLEPV 339
Query: 180 DW---LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG--VSGGGSLPMHIDLFYEAI 234
W A + + WPLH LA L++ K++ + + +SGGG++ HID F+EA+
Sbjct: 340 PWAGRFQAAGVALLRWPLHALASALLWPKVRRQLSGGQLAYPISGGGAIAPHIDAFFEAV 399
Query: 235 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 294
G+++ VGYGLTE+SPVI+ RRP N+ GS G P+ TE +IVD E+ +L +G V V
Sbjct: 400 GIELLVGYGLTETSPVISCRRPWHNIRGSSGLPLPGTEFRIVDPESGTLLGCRQRGRVLV 459
Query: 295 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 354
RG QVM GY+ P AT + LD DGW +TGD+G + G + L GRAKDTI
Sbjct: 460 RGPQVMAGYWGKPDATAKVLDADGWFDTGDLGMLL----------ADGSVALTGRAKDTI 509
Query: 355 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR--LSIVH 412
VLS+GEN+EP LEE + S LI Q++++GQD+R+ A+IVP + +++ A + LS+ +
Sbjct: 510 VLSSGENIEPGPLEEVLVASPLIEQVMLVGQDERQLAALIVPRADVIVVWAGQQGLSLAN 569
Query: 413 ADASELSKEKTISLLYGELRKWT-----SKCSFQIGPIHVVDEPFTVN 455
+ + + LL E + ++ ++ + +VD PFT++
Sbjct: 570 DLGGKPGDQALLRLLMQECNRLLKQRVGARGDERLAGVVLVD-PFTID 616
>gi|116075040|ref|ZP_01472300.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp.
RS9916]
gi|116067237|gb|EAU72991.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp.
RS9916]
Length = 658
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 174/439 (39%), Positives = 257/439 (58%), Gaps = 32/439 (7%)
Query: 28 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI 87
AT +YTSGTTG PKGV LTH NLLHQIRSL + G LS+LP WH YER+ Y+
Sbjct: 212 ATILYTSGTTGQPKGVPLTHANLLHQIRSLACVAHPAPGSPVLSVLPIWHSYERSAEYYF 271
Query: 88 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 147
FS YT ++ LK DL R +P M +VP ++E + +G + + T A+R+ + R+ +
Sbjct: 272 FSCACSQSYTTIKQLKKDLPRVKPVVMATVPRLWEAVQAGFEDVLKTFPASRQRLLRSAL 331
Query: 148 RISFAYTAFKRIYEGFCLTRNQKQPSYLVAL--IDWLWARIICAILWPLHLLAEKLVYKK 205
S AY CL R + + + +L L A + + WP H +A KL++ K
Sbjct: 332 ANSSAY----------CLARRRSRDLMVESLGKRQRLKAALEASRRWPAHAVASKLIWPK 381
Query: 206 I--QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
+ Q + G + ++GGG++ H+D FYEA+G+++ VGYGLTE+SPV++ RRP N+ GS
Sbjct: 382 LRLQLSGGQLQFPINGGGAIAPHVDAFYEAVGIELLVGYGLTETSPVVSCRRPWRNIRGS 441
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
G P+ TE +IVD ET L +G+V VRG QVM GY P AT + LD +GW +TG
Sbjct: 442 SGQPLPDTEFRIVDPETRAPLGFRERGVVLVRGPQVMGGYLGKPEATAKVLDGEGWFDTG 501
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+G + P G +VL GRAKDTIVLS+GEN+EP LEE + S L+ Q++++
Sbjct: 502 DLGLLLPD----------GSVVLTGRAKDTIVLSSGENIEPGPLEECLVASPLVEQVMLV 551
Query: 384 GQDQRRPGAIIVPDKE--EVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT-----S 436
GQD+++ GA++VP E + A + LS+ + + LL GE + +
Sbjct: 552 GQDEKQLGALVVPRLEAIQAWAAEQGLSLADDLGGSPGEPALLKLLRGEFNRLLAGRHGA 611
Query: 437 KCSFQIGPIHVVDEPFTVN 455
+ ++ + +V +PFT++
Sbjct: 612 RADERLAGVGLV-QPFTID 629
>gi|33865203|ref|NP_896762.1| long-chain-fatty-acid--CoA ligase [Synechococcus sp. WH 8102]
gi|33638887|emb|CAE07184.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp. WH
8102]
Length = 637
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 166/391 (42%), Positives = 234/391 (59%), Gaps = 20/391 (5%)
Query: 13 AGKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM 72
AG+ T IAT +YTSGTTG PKGV LTH NLLHQ++SL + + G LS+
Sbjct: 176 AGQQSVTPTSARTAIATVLYTSGTTGQPKGVPLTHANLLHQMQSLACVAHPQPGAPVLSV 235
Query: 73 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
LP WH YER+ Y+ S YT ++ LK DL R +P M +VP ++E++ +G + +
Sbjct: 236 LPIWHAYERSASYYFLSCACTQTYTNIKQLKKDLPRVRPIAMATVPRLWESVQAGFEDVV 295
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
T +R+ + RA + S A+ R L QP VAL + A + A+ W
Sbjct: 296 KTFPPSRQRLLRAALANSAAHRKAVRTARNLLL-----QP---VALPGRMTAAAVAALRW 347
Query: 193 PLHLLAEKLVYKKIQSAIGISKAG--VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
PLH LA L++ K++ + + +SGGG++ HID F+EA+G+++ VGYGLTE+SPV
Sbjct: 348 PLHALASALIWPKLRLQLSGGRLAYPISGGGAIAPHIDAFFEAVGIELLVGYGLTETSPV 407
Query: 251 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSAT 310
++ RRP N+ GS G P+ TE +IVD E+ L +G V VRG QVM GY P A+
Sbjct: 408 VSCRRPWRNIRGSSGLPMPDTEFRIVDQESGASLGFRERGRVLVRGPQVMGGYLGKPEAS 467
Query: 311 KQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA 370
+ L DGW +TGD+G + P G + L GRAKDTIVLS+GEN+EP LEEA
Sbjct: 468 AKVLSADGWFDTGDLGMLLPD----------GSVALTGRAKDTIVLSSGENIEPGPLEEA 517
Query: 371 ALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 401
+ S LI Q++++GQD+R+ GA++VP E +
Sbjct: 518 LVASPLIEQVMLVGQDERQLGALLVPRVEPI 548
>gi|148238916|ref|YP_001224303.1| long-chain acyl-CoA synthetase [Synechococcus sp. WH 7803]
gi|147847455|emb|CAK23006.1| Long-chain acyl-CoA synthetase [Synechococcus sp. WH 7803]
Length = 647
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 163/374 (43%), Positives = 230/374 (61%), Gaps = 20/374 (5%)
Query: 28 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI 87
AT +YTSGTTG PKGV LTH NLLHQ+RSL + E GD LS+LP WH YER+ Y+
Sbjct: 201 ATLLYTSGTTGRPKGVPLTHANLLHQMRSLACVARPEAGDPVLSVLPIWHAYERSAEYYF 260
Query: 88 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 147
FS YT ++ LK DL R +P M++VP ++E + +G + T AR+ + +A +
Sbjct: 261 FSCACSQSYTTIKQLKRDLPRVRPVVMVTVPRLWEAVQAGFDDVLKTFPPARQRLLKAAL 320
Query: 148 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI- 206
S A+ +R L +K+ L A + WP H LA +L++ K+
Sbjct: 321 ANSAAFALARRRSRNLLLDPVRKRDRVLAA--------AEASSRWPAHALASRLIWPKVR 372
Query: 207 -QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 265
Q + G + ++GGG++ H+D F+EA+G+++ VGYGLTE+SPV++ RRP N+ GS G
Sbjct: 373 LQLSGGSLRFPINGGGAIAPHVDSFFEAVGIELLVGYGLTETSPVVSCRRPWRNIRGSSG 432
Query: 266 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 325
P+ TE +IVD ET L +G+V+VRG QVM GY P AT + LD +GW +TGD+
Sbjct: 433 LPMPETEFRIVDGETRRPLGYRQRGVVQVRGPQVMGGYLGKPEATAKVLDAEGWFDTGDL 492
Query: 326 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 385
G + P G +VL GRAKDTIVLS+GEN+EP LEE + S LI Q++++GQ
Sbjct: 493 GLLLPD----------GSVVLTGRAKDTIVLSSGENIEPGPLEETLVASPLIEQVMLVGQ 542
Query: 386 DQRRPGAIIVPDKE 399
D+R+ GA++VP E
Sbjct: 543 DERQLGALVVPRLE 556
>gi|260435335|ref|ZP_05789305.1| long-chain acyl-CoA synthetase [Synechococcus sp. WH 8109]
gi|260413209|gb|EEX06505.1| long-chain acyl-CoA synthetase [Synechococcus sp. WH 8109]
Length = 637
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 167/393 (42%), Positives = 232/393 (59%), Gaps = 20/393 (5%)
Query: 23 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERA 82
G D +AT +YTSGTTG PKGV LTH NLLHQ+ SL + E G LS+LP WH YER+
Sbjct: 186 GRDAVATVLYTSGTTGQPKGVPLTHANLLHQMSSLACVAYPEPGAPVLSVLPIWHAYERS 245
Query: 83 CGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
YF S G YT ++ LK DL R +P M +VP ++E + +G + + T +R+ +
Sbjct: 246 ASYFFLSCGCTQTYTTIKQLKKDLPRVRPIAMATVPRLWEAVQAGFEDVLKTFPPSRQRL 305
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
RA + S A R L +P V+ D L A A+ WPLH LA L+
Sbjct: 306 LRAALANSAAQRKALRTARNLLL-----EP---VSASDRLRACGSAALRWPLHALASTLI 357
Query: 203 YKKIQSAIGISKAG--VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
+ K++ + + +SGGG++ HID F+EA+G+++ VGYGLTE+SPV++ RRP N+
Sbjct: 358 WPKLRRQLSGGQLAYPISGGGAIAPHIDAFFEAVGIELLVGYGLTETSPVVSCRRPWRNI 417
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
GS G P+ TE +IVD + + L +G V VRG QVM GY P A+ + LD GW
Sbjct: 418 RGSSGLPMPQTEFRIVDPDNGQPLGFRQRGRVMVRGPQVMAGYLGKPEASAKVLDAAGWF 477
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
+TGD+G + P G + L GRAKDTIVLS+GEN+EP LEEA + S LI Q+
Sbjct: 478 DTGDLGMLMPD----------GSVALTGRAKDTIVLSSGENIEPGPLEEALVASPLIEQV 527
Query: 381 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA 413
+++GQD+R+ G +IVP E ++ A + A
Sbjct: 528 MLVGQDERQLGGLIVPRAEVIVAWAAEAGVSAA 560
>gi|159902941|ref|YP_001550285.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str. MIT
9211]
gi|159888117|gb|ABX08331.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. MIT 9211]
Length = 664
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 163/390 (41%), Positives = 233/390 (59%), Gaps = 20/390 (5%)
Query: 15 KHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLP 74
K Y IAT +YTSGTTG PKGV LTH N LHQI SL I G LS+LP
Sbjct: 201 KKASYGDKSDSPIATILYTSGTTGKPKGVPLTHANFLHQISSLACIANPSPGTPLLSVLP 260
Query: 75 PWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 134
WH YER+ Y+ FS G YT +++ K+DLQR +P M +VP ++E++ G I
Sbjct: 261 IWHSYERSAEYYFFSCGCTQNYTTIKHFKEDLQRVKPVVMATVPRLWESVKIGFDDAIKK 320
Query: 135 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 194
+ R+ + +A + S AY R + V ++ ++A A+ WP+
Sbjct: 321 MPSFRQNIIKAALNNSGAYKLALRKLRNLLIND--------VFFLERIFALGEVALRWPV 372
Query: 195 HLLAEKLVYKKIQSAI--GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
H ++ L++ K+ + + G ++GGG++ H+D F+E++GV++ VGYGLTE+SPV++
Sbjct: 373 HFMSSCLLWPKVLTQLCGGRLLFPINGGGAIAPHVDQFFESLGVELLVGYGLTETSPVLS 432
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
RRP N+ GS G P+ T +IVD E V+ KG+V +G QVM+GY N AT +
Sbjct: 433 CRRPWRNIRGSSGPPLPETAFRIVDPEDGRVMNYREKGLVLAKGPQVMKGYLGNLKATAK 492
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
DE+GW NTGD+G + P G LVL GRAKDTIVLS+GEN+EP LEE +
Sbjct: 493 VFDEEGWFNTGDLGMLLPD----------GSLVLTGRAKDTIVLSSGENIEPGPLEEVLV 542
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVL 402
S LI+QI+++GQDQ++ GA++VP+ E+VL
Sbjct: 543 ASPLIKQIMLVGQDQKQLGALVVPNAEQVL 572
>gi|113955509|ref|YP_729826.1| long-chain acyl-CoA synthetase [Synechococcus sp. CC9311]
gi|113882860|gb|ABI47818.1| Long-chain acyl-CoA synthetase [Synechococcus sp. CC9311]
Length = 632
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 164/388 (42%), Positives = 236/388 (60%), Gaps = 24/388 (6%)
Query: 31 VYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSR 90
+YTSGTTG PKGV L+H NLLHQ+RSL + E G LS+LP WH YER+ Y+ FS
Sbjct: 190 LYTSGTTGQPKGVPLSHANLLHQMRSLSCVARPEPGAPVLSVLPIWHAYERSAEYYFFSC 249
Query: 91 GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRIS 150
YT ++ LK DL R +P M++VP ++E + +G + + T A+R+ + RA + S
Sbjct: 250 ACSQSYTTIKQLKRDLPRVKPVVMVTVPRLWEAVQAGFEDVLKTFPASRQRLLRAALSNS 309
Query: 151 FAYTAFKRIYEGFCLTRNQKQPSYLVAL--IDWLWARIICAILWPLHLLAEKLVYKKI-- 206
AY CL R Q+ L+ L L A + A WP H LA KL++ K+
Sbjct: 310 SAY----------CLARRQRCNLMLMPLGRRQRLMACLKSAGRWPAHALASKLIWPKLRL 359
Query: 207 QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 266
Q + G + ++GG ++ H+D F+EA+G+++ VGYGLTE+SPV++ RRP N+ GS G
Sbjct: 360 QLSGGQLRFPINGGAAIAPHVDSFFEAVGIELLVGYGLTETSPVVSCRRPWRNIRGSSGQ 419
Query: 267 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG 326
P+ TE IVD E+ L +G+V VRG QVMQGY P AT + LD DGW +TGD+G
Sbjct: 420 PMPQTEFMIVDPESRAPLSFRERGLVLVRGPQVMQGYLGKPEATAKVLDVDGWFDTGDLG 479
Query: 327 WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD 386
+ P G +VL GRAKDTIVLS+GEN+EP LE L + ++ Q++++GQD
Sbjct: 480 MLLPD----------GSVVLTGRAKDTIVLSSGENIEPGPLEAHLLMNPVVEQVLLVGQD 529
Query: 387 QRRPGAIIVPDKEEVLMAAKRLSIVHAD 414
+++ A+IVP+++ + A+ I + D
Sbjct: 530 KKQLAALIVPNQDGLRQFAENKEIENID 557
>gi|78213528|ref|YP_382307.1| long-chain-fatty-acid--CoA ligase [Synechococcus sp. CC9605]
gi|78197987|gb|ABB35752.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp.
CC9605]
Length = 637
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 174/442 (39%), Positives = 252/442 (57%), Gaps = 28/442 (6%)
Query: 23 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERA 82
G D +AT +YTSGTTG PKGV LTH NLLHQ+ SL + E G LS+LP WH YER+
Sbjct: 186 GRDAVATVLYTSGTTGQPKGVPLTHANLLHQMSSLACVAYPEPGAPVLSVLPIWHAYERS 245
Query: 83 CGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
YF S YT ++ LK DL R +P M +VP ++E + +G + + T +R+ +
Sbjct: 246 ASYFFLSCACTQTYTTIKQLKKDLPRVRPIAMATVPRLWEAVQAGFEDVLKTFPPSRQRL 305
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
RA + S A R L +P V+ L A A+ WPLH LA L+
Sbjct: 306 LRAALANSAAQRKAVRTARNLLL-----EP---VSASGRLRACGSAALRWPLHALASTLI 357
Query: 203 YKKIQSAIGISKAG--VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
+ K++ + + +SGGG++ HID F+EA+G+++ VGYGLTE+SPV++ RRP N+
Sbjct: 358 WPKLRRQLSGGQLAYPISGGGAIAPHIDAFFEAVGIELLVGYGLTETSPVVSCRRPWRNI 417
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
GS G P+ TE +IVD + + L +G V VRG QVM GY P A+ + LD GW
Sbjct: 418 RGSSGLPMPQTEFRIVDPDNGQPLGFRQRGRVMVRGPQVMVGYLGKPEASAKVLDTAGWF 477
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
+TGD+G + P G + L GRAKDTIVLS+GEN+EP LEEA + S LI Q+
Sbjct: 478 DTGDLGMLLPD----------GSVALTGRAKDTIVLSSGENIEPGPLEEALVASPLIEQV 527
Query: 381 VVIGQDQRRPGAIIVPDKEEVLMAAKR--LSIVHADASELSKEKTISLLYGEL-----RK 433
+++GQD+R+ GA+IVP E ++ A +++ + + LL E ++
Sbjct: 528 MLVGQDERQLGALIVPRAEAIVAWAAEACVNVAQDLGGQPGDPALLRLLMRECNRLLKQR 587
Query: 434 WTSKCSFQIGPIHVVDEPFTVN 455
W S+ ++ + +VD PF++
Sbjct: 588 WGSRGDERLAGVVLVD-PFSIE 608
>gi|88809271|ref|ZP_01124780.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp. WH
7805]
gi|88787213|gb|EAR18371.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp. WH
7805]
Length = 647
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 174/436 (39%), Positives = 258/436 (59%), Gaps = 26/436 (5%)
Query: 28 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI 87
AT +YTSGTTG PKGV L+H NLLHQ+RSL + E GD LS+LP WH YER+ Y+
Sbjct: 201 ATLLYTSGTTGRPKGVPLSHANLLHQMRSLACVARPEAGDPVLSVLPIWHAYERSAEYYF 260
Query: 88 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 147
FS YT ++ LK DL R +P M++VP ++E + +G + T AR+ + +A +
Sbjct: 261 FSCACSQSYTTIKQLKRDLPRVRPVVMVTVPRLWEAVQAGFDDVLKTFPPARQRLLKAAL 320
Query: 148 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 207
S AY +R L +K+ D + A + WP H LA +L++ +++
Sbjct: 321 ANSAAYALARRRSRNLMLDPVRKR--------DRVIAAAEASSRWPAHALAARLIWPQVR 372
Query: 208 SAI--GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 265
+ G + ++GGG++ H+D F+EA+G+++ VGYGLTE+SPV++ RRP N+ GS G
Sbjct: 373 RQLSGGSLRFPINGGGAIAPHVDSFFEAVGIELLVGYGLTETSPVVSCRRPWRNIRGSSG 432
Query: 266 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 325
P+ TE +I+DAET L +G+V+VRG QVM+GY P AT + LD +GW +TGD+
Sbjct: 433 LPMPETEFRILDAETRLPLGYRQRGVVQVRGPQVMRGYLGKPEATAKVLDAEGWFDTGDL 492
Query: 326 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 385
G + P G +VL GRAKDTIVLS+GEN+EP LEE + S LI Q++++GQ
Sbjct: 493 GLLLPD----------GSVVLTGRAKDTIVLSSGENIEPGPLEETLVASPLIEQVMLVGQ 542
Query: 386 DQRRPGAIIVPDKEEVLM-AAKRLSIVHADASELSKEKTI-SLLYGELRKWTSKCSFQIG 443
D+R+ GA++VP E + A+ +++ D + + LL GEL + S G
Sbjct: 543 DERQLGALVVPRLEAMRAWASDQIADPGEDLGGSPGDPGLRRLLRGELNRLLSDRVGARG 602
Query: 444 PIHVVD----EPFTVN 455
+V EPF+++
Sbjct: 603 DERLVGVALVEPFSID 618
>gi|452822005|gb|EME29029.1| long-chain acyl-CoA synthetase [Galdieria sulphuraria]
Length = 762
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 184/468 (39%), Positives = 273/468 (58%), Gaps = 62/468 (13%)
Query: 23 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI-----VPAENGDKFLSMLPPWH 77
S D+AT +YTSGTTG PKGV LTH+NLL+QI S+ DI VP G+ F+S+LP WH
Sbjct: 284 SSSDLATLIYTSGTTGRPKGVELTHENLLYQIASI-DIGKCCPVP---GNVFVSILPCWH 339
Query: 78 VYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
V+ER YF F+RG+ ++Y+ VRNL++DLQ ++P ++++VP V+E+LY+ I I S
Sbjct: 340 VFERTAEYFFFARGVCVVYSNVRNLRNDLQLHKPQFLVAVPRVFESLYNNIMSNISKQSL 399
Query: 138 ARRVVARALIRISFAY-TAFKRIYEGFCLTRNQKQPSYLVALID---W--LWARIICAIL 191
RR + R IS +Y AF+ ++ S + ID W L A + L
Sbjct: 400 MRRYLIRMFTFISLSYHRAFRTLF------------SLDIFRIDSRFWKKLKAFFVLIAL 447
Query: 192 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
+ H LA +V+ KI+S +G + G+ GGGSLP +++ FY + GV + VGYGLTE+SPV
Sbjct: 448 FTFHKLANWIVWSKIRSVLGGRVQCGICGGGSLPFYLEEFYASTGVCLLVGYGLTETSPV 507
Query: 251 IAARRPTC-NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
++ RRP N+LGS G + T++K+V ET E L G G++ VRG V++GY++ P
Sbjct: 508 VSHRRPGLENMLGSSGRCLPGTQVKVVHPETKEELKHGDIGLLLVRGPGVVRGYYREPER 567
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
+ L EDG+ N+GD+ WI P++ G +V+ GR KD IVL+ GEN+EP +E+
Sbjct: 568 SDVFL-EDGFFNSGDLAWIVPNN---------GHIVISGRYKDVIVLNNGENIEPQPIED 617
Query: 370 AALRSSLIRQIVVIGQDQRRPGAIIVPDK-----------------EEVLMAAKRLSIVH 412
A L S L Q++++GQD+R GA++VP EE + + S +
Sbjct: 618 AILESPLFDQVILVGQDERHLGALLVPSLEYLKVEGILSSEYITAIEEARLDPSKDSFLR 677
Query: 413 ADASELSK-EKTISLLYGEL-RKWTSKCSFQ----IGPIHVVDEPFTV 454
+ +L+K E+ L+ EL + S+ F I H++ PFTV
Sbjct: 678 EEEVKLTKMERIKQLVRKELYERVVSRPHFTPNDFIRTFHLILAPFTV 725
>gi|116071118|ref|ZP_01468387.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp.
BL107]
gi|116066523|gb|EAU72280.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp.
BL107]
Length = 653
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 173/442 (39%), Positives = 256/442 (57%), Gaps = 28/442 (6%)
Query: 23 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERA 82
GS+ +AT +YTSGTTG PKGV LTH NLLHQIRSL + + GD LS+LP WH YER+
Sbjct: 202 GSNQVATILYTSGTTGQPKGVPLTHANLLHQIRSLACVAYPQPGDPVLSVLPIWHAYERS 261
Query: 83 CGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y+ S YT ++ LK DL R QP M +VP ++E++ +G + + T +R+ +
Sbjct: 262 ASYYFLSCACTQTYTTIKQLKKDLPRVQPIAMATVPRLWESVQAGFEDVVKTFPPSRQRL 321
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
RA + S A R L +P V A + + WPLH LA L+
Sbjct: 322 LRAALSNSSAQRQALRRANNLML-----EP---VCWAGRFQAAGVACLRWPLHALASALL 373
Query: 203 YKKIQSAIGISKAG--VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
+ K++ + + +SGGG++ HID F+EA+G+++ VGYGLTE+SPVI+ RRP N+
Sbjct: 374 WPKVRRQLSGGQLAYPISGGGAIAPHIDAFFEAVGIELLVGYGLTETSPVISCRRPWHNI 433
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
GS G P+ TE ++VD E+ L +G V VRG QVM GY+ P AT + LD +GW
Sbjct: 434 RGSSGLPLPGTEFRVVDPESGMSLGCRERGRVLVRGPQVMGGYWGKPDATAKVLDAEGWF 493
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
+TGD+G + G + L GRAKDTIVLS+GEN+EP LEE + S LI Q+
Sbjct: 494 DTGDLGMLL----------ADGSVALTGRAKDTIVLSSGENIEPGPLEEVLVASPLIEQV 543
Query: 381 VVIGQDQRRPGAIIVPDKEEVLMAAKR--LSIVHADASELSKEKTISLLYGE-----LRK 433
+++GQD+R+ A+IVP + ++ A + LS+ + + + + LL E ++
Sbjct: 544 MLVGQDERQLAALIVPRADVIVDWAGQQGLSLANDLGGKPGDQALLRLLMKEGNRLLKQR 603
Query: 434 WTSKCSFQIGPIHVVDEPFTVN 455
++ ++ + +VD PFT++
Sbjct: 604 VGARGDERLAGVALVD-PFTID 624
>gi|33239851|ref|NP_874793.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33237377|gb|AAP99445.1| Long-chain acyl-CoA synthetase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 675
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 169/404 (41%), Positives = 236/404 (58%), Gaps = 21/404 (5%)
Query: 9 TPVIAGKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDK 68
+P+ A K T S IAT +YTSGTTG PKGV LTH NLLHQ+RSL I G
Sbjct: 211 SPINAFKEATGITANSS-IATILYTSGTTGKPKGVPLTHDNLLHQMRSLACIASPPPGTP 269
Query: 69 FLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGI 128
LS+LP WH YER+ Y+ FS YT +++ K DLQ +P M +VP ++E + +G
Sbjct: 270 LLSVLPIWHSYERSAEYYFFSCACSQHYTTIKHFKQDLQTVRPVVMATVPRLWEAVKTGF 329
Query: 129 QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 188
+ + +R++V +A + S + A R L K + +A +
Sbjct: 330 DEALKKMPRSRQMVLKAALNNSRLFKAALRKSRNLLLLEINKT-NRAIAFSE-------V 381
Query: 189 AILWPLHLLAEKLVYKKI--QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 246
WP+H LA KL++ K+ Q + G + ++GGG++ H+D F+EA+GV++ VGYGLTE
Sbjct: 382 VFRWPIHALASKLLWPKVLQQLSGGRLRFPINGGGAIAPHVDTFFEALGVELLVGYGLTE 441
Query: 247 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKN 306
+SPV++ RR N+ GS G P+ TE +IVD L +G V VRG QVM GY +
Sbjct: 442 TSPVLSCRRTWRNIRGSSGLPLPETEFRIVDPLNGGPLKFSQQGRVLVRGPQVMNGYLRK 501
Query: 307 PSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLE 366
P T + LD+ GW +TGD+G + G +VL GRAKDTIVLS GENVEP
Sbjct: 502 PEETSKVLDQKGWFDTGDLGMLL----------ADGSIVLTGRAKDTIVLSNGENVEPGP 551
Query: 367 LEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 410
LEE L S LI QI++IGQD+R+ GA+IVPD +++L A + ++
Sbjct: 552 LEEFLLGSPLIEQIIMIGQDERQLGALIVPDIDQILKWAHQRNL 595
>gi|124023832|ref|YP_001018139.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str. MIT
9303]
gi|123964118|gb|ABM78874.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. MIT 9303]
Length = 621
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 169/417 (40%), Positives = 248/417 (59%), Gaps = 24/417 (5%)
Query: 28 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI 87
AT +YTSGTTG PKGV L+H NLLHQ+R L + G+ LS+LP WH YER+ Y+
Sbjct: 174 ATILYTSGTTGQPKGVPLSHANLLHQMRCLACVAFPSPGEPVLSVLPIWHAYERSAEYYF 233
Query: 88 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 147
FS YT ++ LK DL R +P M +VP ++E + +G + + R+ L+
Sbjct: 234 FSCACTQSYTTIKQLKRDLPRVRPIVMATVPRLWEAIQAGFDEAVKGMPTGRQ----RLL 289
Query: 148 RISFAYTAFKRIYEGFCLTRNQK-QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 206
R++ A + +R + + +RN +P V L A + + WPLH LA L++ K+
Sbjct: 290 RMALANSGSQR--KAWRRSRNLLLEP---VPLTTRTLALLEATLRWPLHGLAGALLWPKV 344
Query: 207 QSAI--GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 264
+ + G + ++GGG++ H+D F+EA+G+++ VGYGLTE+SPV++ RRP N+ GS
Sbjct: 345 LNQLCGGRLRFPINGGGAIAPHVDAFFEAVGLELLVGYGLTETSPVVSCRRPWRNIRGSS 404
Query: 265 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 324
G P+ TE +IVD E+ L +G V VRG QVM GY + P AT + LD GW +TGD
Sbjct: 405 GPPLPDTEFRIVDPESGAALMFRQRGRVLVRGPQVMAGYLRKPEATAKVLDGQGWFDTGD 464
Query: 325 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 384
+G + P G LVL GRAKDTIVLS+GEN+EP LE A + S L+ Q++++G
Sbjct: 465 LGMLLPD----------GSLVLTGRAKDTIVLSSGENIEPGPLEAALVASPLLEQVMLVG 514
Query: 385 QDQRRPGAIIVPDKEEVLMAAKR--LSIVHADASELSKEKTISLLYGELRKWTSKCS 439
QD+R+ A++VP +EE+L A+ LS+ + E LL GEL + ++ S
Sbjct: 515 QDERQLAALVVPREEEMLAWAEDQGLSMQTGLSGSPGDEALRRLLRGELNRLLAQRS 571
>gi|320538352|ref|ZP_08038230.1| AMP-binding enzyme [Treponema phagedenis F0421]
gi|320144796|gb|EFW36534.1| AMP-binding enzyme [Treponema phagedenis F0421]
Length = 643
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 168/407 (41%), Positives = 241/407 (59%), Gaps = 28/407 (6%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DDIAT ++TSGTTG PKGVMLTHKN L Q+ L + G++ LS+LP WHV+ER C
Sbjct: 193 DDIATIIFTSGTTGTPKGVMLTHKNFLSQLPELSKRIILYPGERALSVLPVWHVFERLCE 252
Query: 85 YFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y I + Y+ L D + PH + SVP ++E ++ G+ KQ+ +
Sbjct: 253 YAIIHAAAGIAYSKPIGSILLADFAKINPHLLPSVPRIWEAVHDGVFKQLRKKGGISYAL 312
Query: 143 ARALIRI-SFAYTAFKRIYEGFCLT-RNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+ ++ + + +R+++ T + +K + +A I WL +L P+HLL +
Sbjct: 313 FKFFLKAGNLRFHYHRRLFKNVAYTSQAEKTVAPFLAFIPWL-------LLTPIHLLGDA 365
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LV+ KI+ +G + +AGVSGGG+LP +ID F+ GV V GYGLTE++PV+A R +
Sbjct: 366 LVFSKIRLKLGKNFRAGVSGGGALPGNIDEFFWTAGVTVVEGYGLTETAPVVAVRSVSHP 425
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
+ G++G P N+ ++K+VD +T + LP G +G+V VRG VM+GYFK P T+ +D+DGW
Sbjct: 426 IFGTIGTPCNYNQVKVVD-DTGKTLPMGEQGVVYVRGDNVMKGYFKRPELTESVIDKDGW 484
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
NTGDIG+I GG +VL GR KDTIVL GEN+EP+ +E S I
Sbjct: 485 FNTGDIGYIC----------LGGEIVLRGRLKDTIVLRGGENIEPVPIEMRLQESQYISL 534
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISL 426
VV+GQDQR GA+I+PD+ E+ AK I +E S EK I L
Sbjct: 535 AVVVGQDQRYLGALILPDEAELQAWAKSQHI-----AEESMEKLIEL 576
>gi|392401663|ref|YP_006438275.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
gi|390609617|gb|AFM10769.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
Length = 625
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 161/416 (38%), Positives = 253/416 (60%), Gaps = 21/416 (5%)
Query: 12 IAGKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLS 71
+AG + + + SDD+ T +YTSGTTG PKGVML+H N+++ I + + D LS
Sbjct: 165 LAGLKERCDAVKSDDLFTIIYTSGTTGLPKGVMLSHGNMVYNINEVPKAIGLRPDDSMLS 224
Query: 72 MLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
+LP WH++ERA Y ++GI L YT VR+++DD + +P +M S P ++E+LY GI ++
Sbjct: 225 LLPVWHIFERAVDYGAIAKGIPLYYTNVRDVRDDFAKVKPTFMPSAPRLWESLYQGIMQR 284
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI- 190
I S AR+V+ RIS Y K+ + +QP + + + A
Sbjct: 285 IEKSEPARKVMFETAYRISKEY---KKAVDYLAGNELMQQPESDADRLSRTASSLFTAAS 341
Query: 191 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
L+ LA+++V+ KI+ A+G + +SGGG+LP H+D F+ IG+ V GYG+TE +P
Sbjct: 342 LYIPARLADRVVFSKIREAMGGRFRGSISGGGALPAHVDEFFNVIGIPVYEGYGMTECAP 401
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
+I+ R + GSVG N TE+ I++ + E + G KG++ VRG QVM+GY+KNP A
Sbjct: 402 IISVRTEGKIIQGSVGFVPNGTEVAILN-DKGERVRTGEKGVIHVRGPQVMKGYYKNPEA 460
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T++ +++DGWLNTGDIG+ + +++ L + GRAK+TIVL GENVEP+ +E
Sbjct: 461 TEKTINKDGWLNTGDIGFFSFNNT----------LSIRGRAKETIVLLGGENVEPVPIEN 510
Query: 370 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD-ASELSKEKTI 424
L + I QI+V+GQD++ A++ P+ E+V K ++ + AD S+L+ K +
Sbjct: 511 KLLEDAQINQIIVVGQDKKTLTALVWPNLEKV----KEVAGISADPKSDLNANKEL 562
>gi|378974784|ref|YP_005223392.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum DAL-1]
gi|384421695|ref|YP_005631054.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum str. Chicago]
gi|291059561|gb|ADD72296.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum str. Chicago]
gi|374680182|gb|AEZ60472.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum DAL-1]
Length = 668
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 173/408 (42%), Positives = 231/408 (56%), Gaps = 33/408 (8%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+AT ++TSGTTG PKGV+L+H+N L Q+ + + GD LS+LP WHV+ER Y
Sbjct: 219 DVATIIFTSGTTGTPKGVVLSHENFLCQLIDISRRLTVCPGDIALSVLPVWHVFERISEY 278
Query: 86 FIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
+ S + Y+ + DL + PH++ SVP ++E ++ GI K + +
Sbjct: 279 VVLSHAGGVAYSKPVGSVMLADLAKLNPHFLPSVPRIWEAIHDGIFKNVRKKGGVAAALF 338
Query: 144 RALIRISFAYTAFKRIYEGF--CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
+ AY F R G TR + + L A + WL +L PLH L L
Sbjct: 339 HFFLAAGKAYAYFYRSVFGLRTHTTRRAQFCAPLFACVPWL-------LLVPLHFLGNVL 391
Query: 202 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
V++K++ G S K +SGGG+LP ++D F AIGV+V GYGLTE++PVIA R V
Sbjct: 392 VFRKVRKKFGTSFKTAISGGGALPPNVDEFLYAIGVRVLEGYGLTETAPVIAMRSERRPV 451
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
GSVG P + E+KIVD +T LP G KGIV VRG +MQGY+KNP T Q LD DGW
Sbjct: 452 FGSVGTPCAYNEVKIVD-DTGAQLPVGYKGIVLVRGKNIMQGYYKNPELTAQVLDADGWF 510
Query: 321 NTGDIGWIAPHHSRGRSRRC-GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
NTGDIG+ RC GG +VL GR KDT+VL GENVEP+ LE + S I +
Sbjct: 511 NTGDIGY-----------RCVGGQIVLRGRKKDTVVLRGGENVEPVPLEMSMQESRFIAR 559
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLL 427
VV+GQD+R A+IVPD+ E+ + A+A EL E LL
Sbjct: 560 AVVVGQDERYLAALIVPDEAELRL--------WAEAQELRTECMEELL 599
>gi|338706124|ref|YP_004672892.1| long-chain-fatty-acid--CoA ligase [Treponema paraluiscuniculi
Cuniculi A]
gi|335344185|gb|AEH40101.1| long-chain-fatty-acid--CoA ligase [Treponema paraluiscuniculi
Cuniculi A]
Length = 668
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 173/408 (42%), Positives = 231/408 (56%), Gaps = 33/408 (8%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+AT ++TSGTTG PKGV+L+H+N L Q+ + + GD LS+LP WHV+ER Y
Sbjct: 219 DVATIIFTSGTTGTPKGVVLSHENFLCQLIDISHRLTVCPGDIALSVLPVWHVFERISEY 278
Query: 86 FIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
+ S + Y+ + DL + PH++ SVP ++E ++ GI K + +
Sbjct: 279 VVLSHAGGVAYSKPVGSVMLADLAKLNPHFLPSVPRIWEAIHDGIFKNVRKKGGVAAALF 338
Query: 144 RALIRISFAYTAFKRIYEGF--CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
+ AY F R G TR + + L A + WL +L PLH L L
Sbjct: 339 HFFLAAGKAYAYFYRSVFGLRTHTTRRAQFCAPLFACVPWL-------LLVPLHFLGNVL 391
Query: 202 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
V++K++ G S K +SGGG+LP ++D F AIGV+V GYGLTE++PVIA R V
Sbjct: 392 VFRKVRKEFGTSFKTAISGGGALPPNVDEFLYAIGVRVLEGYGLTETAPVIAMRSERRPV 451
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
GSVG P + E+KIVD +T LP G KGIV VRG +MQGY+KNP T Q LD DGW
Sbjct: 452 FGSVGTPCAYNEVKIVD-DTGAQLPVGYKGIVLVRGKNIMQGYYKNPELTAQVLDADGWF 510
Query: 321 NTGDIGWIAPHHSRGRSRRC-GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
NTGDIG+ RC GG +VL GR KDT+VL GENVEP+ LE + S I +
Sbjct: 511 NTGDIGY-----------RCVGGQIVLRGRKKDTVVLRGGENVEPVPLEMSMQESRFIAR 559
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLL 427
VV+GQD+R A+IVPD+ E+ + A+A EL E LL
Sbjct: 560 AVVVGQDERYLAALIVPDEAELRL--------WAEAQELRTECMEELL 599
>gi|378972655|ref|YP_005221259.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pertenue str. SamoaD]
gi|378973722|ref|YP_005222328.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pertenue str. Gauthier]
gi|378981631|ref|YP_005229936.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pertenue str. CDC2]
gi|374676978|gb|AEZ57271.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pertenue str. SamoaD]
gi|374678048|gb|AEZ58340.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pertenue str. CDC2]
gi|374679117|gb|AEZ59408.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pertenue str. Gauthier]
Length = 668
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 173/408 (42%), Positives = 231/408 (56%), Gaps = 33/408 (8%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+AT ++TSGTTG PKGV+L+H+N L Q+ + + GD LS+LP WHV+ER Y
Sbjct: 219 DVATIIFTSGTTGTPKGVVLSHENFLCQLIDISRRLTVCPGDIALSVLPVWHVFERISEY 278
Query: 86 FIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
+ S + Y+ + DL + PH++ SVP ++E ++ GI K + +
Sbjct: 279 VVLSHAGGVAYSKPVGSVMLADLAKLNPHFLPSVPRIWEAIHDGIFKNVRKKGGVAAALF 338
Query: 144 RALIRISFAYTAFKRIYEGF--CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
+ AY F R G TR + + L A + WL +L PLH L L
Sbjct: 339 HFFLAAGKAYAYFYRSVFGLRTHTTRRAQFCAPLFACVPWL-------LLVPLHFLGNVL 391
Query: 202 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
V++K++ G S K +SGGG+LP ++D F AIGV+V GYGLTE++PVIA R V
Sbjct: 392 VFRKVRKKFGTSFKTAISGGGALPPNVDEFLYAIGVRVLEGYGLTETAPVIAMRSERRPV 451
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
GSVG P + E+KIVD +T LP G KGIV VRG +MQGY+KNP T Q LD DGW
Sbjct: 452 FGSVGTPCAYNEVKIVD-DTGAQLPVGYKGIVLVRGKNIMQGYYKNPELTAQVLDADGWF 510
Query: 321 NTGDIGWIAPHHSRGRSRRC-GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
NTGDIG+ RC GG +VL GR KDT+VL GENVEP+ LE + S I +
Sbjct: 511 NTGDIGY-----------RCVGGQIVLRGRKKDTVVLRGGENVEPVPLEMSMQESRFIAR 559
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLL 427
VV+GQD+R A+IVPD+ E+ + A+A EL E LL
Sbjct: 560 AVVVGQDERYLAALIVPDEAELRL--------WAEAQELRTECMEELL 599
>gi|15639139|ref|NP_218585.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189025379|ref|YP_001933151.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum SS14]
gi|408502048|ref|YP_006869492.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum str. Mexico A]
gi|3322408|gb|AAC65132.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189017954|gb|ACD70572.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum SS14]
gi|408475411|gb|AFU66176.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum str. Mexico A]
Length = 656
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 173/408 (42%), Positives = 231/408 (56%), Gaps = 33/408 (8%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+AT ++TSGTTG PKGV+L+H+N L Q+ + + GD LS+LP WHV+ER Y
Sbjct: 207 DVATIIFTSGTTGTPKGVVLSHENFLCQLIDISRRLTVCPGDIALSVLPVWHVFERISEY 266
Query: 86 FIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
+ S + Y+ + DL + PH++ SVP ++E ++ GI K + +
Sbjct: 267 VVLSHAGGVAYSKPVGSVMLADLAKLNPHFLPSVPRIWEAIHDGIFKNVRKKGGVAAALF 326
Query: 144 RALIRISFAYTAFKRIYEGF--CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
+ AY F R G TR + + L A + WL +L PLH L L
Sbjct: 327 HFFLAAGKAYAYFYRSVFGLRTHTTRRAQFCAPLFACVPWL-------LLVPLHFLGNVL 379
Query: 202 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
V++K++ G S K +SGGG+LP ++D F AIGV+V GYGLTE++PVIA R V
Sbjct: 380 VFRKVRKKFGTSFKTAISGGGALPPNVDEFLYAIGVRVLEGYGLTETAPVIAMRSERRPV 439
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
GSVG P + E+KIVD +T LP G KGIV VRG +MQGY+KNP T Q LD DGW
Sbjct: 440 FGSVGTPCAYNEVKIVD-DTGAQLPVGYKGIVLVRGKNIMQGYYKNPELTAQVLDADGWF 498
Query: 321 NTGDIGWIAPHHSRGRSRRC-GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
NTGDIG+ RC GG +VL GR KDT+VL GENVEP+ LE + S I +
Sbjct: 499 NTGDIGY-----------RCVGGQIVLRGRKKDTVVLRGGENVEPVPLEMSMQESRFIAR 547
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLL 427
VV+GQD+R A+IVPD+ E+ + A+A EL E LL
Sbjct: 548 AVVVGQDERYLAALIVPDEAELRL--------WAEAQELRTECMEELL 587
>gi|123965699|ref|YP_001010780.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str. MIT
9515]
gi|123200065|gb|ABM71673.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. MIT 9515]
Length = 641
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 169/413 (40%), Positives = 234/413 (56%), Gaps = 39/413 (9%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+DIA+ +YTSGTTG PKGV LTH N LHQI +L I E G LS+LP WH YER+
Sbjct: 198 NDIASILYTSGTTGKPKGVPLTHANFLHQIINLAYIADPETGTSVLSVLPIWHSYERSAE 257
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
YF FS G YT + LKDD+++ +P M +VP ++E ++ G + + ++ +
Sbjct: 258 YFFFSCGCTQFYTNPKFLKDDIKKVKPVVMATVPRLWEAIHDGFFLALKKMNPKKQKTIK 317
Query: 145 ALIRISFAYTAFKRIYEGF-CLTRNQKQPSYLVALI-----DWLWARIICAILWP---LH 195
LI+ S + FKR + NQ + LI + +I LWP
Sbjct: 318 FLIKNS---SIFKRNLRKIRNIEINQVSSLAKICLIISVLGRFFLHKISSTFLWPSILKQ 374
Query: 196 LLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
L EKL K ++GGG+LP H+DLF+E++G+ V VGYGLTE+SPV+ RR
Sbjct: 375 LCGEKL------------KFPINGGGALPEHVDLFFESLGIDVLVGYGLTETSPVLTCRR 422
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
NV GS G P+ TEIKIV+ E +++L G + V+G QVM+GY N SATK L
Sbjct: 423 RELNVRGSSGQPLAFTEIKIVNEEKDKILEFREVGKILVKGPQVMKGYLNNDSATKDVLS 482
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
+DGW +TGD+G++ P+ G LV+ GRAKDTIVLS+GEN+EP LE L S
Sbjct: 483 KDGWFDTGDLGFLIPN----------GSLVITGRAKDTIVLSSGENIEPNPLETQILSSE 532
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
I Q+ ++GQD++ A++VP+ E V + D S L+ K I L +
Sbjct: 533 FINQVQLVGQDKKFLTALVVPNIELV-----KNKFFANDLSTLNSNKNIGLFF 580
>gi|124025167|ref|YP_001014283.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str.
NATL1A]
gi|123960235|gb|ABM75018.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. NATL1A]
Length = 657
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 163/378 (43%), Positives = 229/378 (60%), Gaps = 22/378 (5%)
Query: 27 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 86
IAT +YTSGTTG PKGV LTH NLLHQIRSL + G LS+LP WH YER+ Y+
Sbjct: 210 IATILYTSGTTGKPKGVPLTHSNLLHQIRSLACVANPSPGAPVLSVLPIWHSYERSAEYY 269
Query: 87 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 146
FS G YT++R+LK+DL R +P M +VP ++E++ G + + R+ + ++
Sbjct: 270 FFSCGCTQTYTSIRHLKEDLPRVKPIVMATVPRLWESIKLGFEDAVDKMPRLRKTLIKSA 329
Query: 147 IRISFAYT-AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKK 205
I S AY A +++Y F + L++ I+ L + +P+H ++ ++ K
Sbjct: 330 ISNSKAYKLARRKLY--FLTIESVSSFEQLISCIEIL-------LRYPIHRISSIYLWPK 380
Query: 206 IQSAI--GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
I + I G + +SGGG++ HID F+EA+GV++ VGYGLTE+SPV+ RRP N+ G
Sbjct: 381 ILTKICGGKLRFPISGGGAIAPHIDSFFEALGVELLVGYGLTETSPVLTCRRPWRNIRGG 440
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
G P+ TEIKIVD ET ++ KG+V RG Q+M GY S +K+ LD GW NTG
Sbjct: 441 AGQPLPETEIKIVDPETFQIKKLRQKGLVLARGPQIMSGYLGKRSESKKVLDATGWFNTG 500
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+G + G L+L GRAKDTIVLS+GEN+EP LEE + S LI Q +++
Sbjct: 501 DLGMLL----------SDGSLILTGRAKDTIVLSSGENIEPGPLEECLIASPLIEQALLL 550
Query: 384 GQDQRRPGAIIVPDKEEV 401
GQDQ+ A+IVP + V
Sbjct: 551 GQDQKYLAALIVPRIDHV 568
>gi|72383573|ref|YP_292928.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str.
NATL2A]
gi|72003423|gb|AAZ59225.1| long-chain acyl-CoA synthetase [Prochlorococcus marinus str.
NATL2A]
Length = 657
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 163/378 (43%), Positives = 228/378 (60%), Gaps = 22/378 (5%)
Query: 27 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 86
IAT +YTSGTTG PKGV LTH NLLHQIRSL + G LS+LP WH YER+ Y+
Sbjct: 210 IATILYTSGTTGKPKGVPLTHSNLLHQIRSLACVANPSPGAPVLSVLPIWHSYERSAEYY 269
Query: 87 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 146
FS G YT++R+LK+DL R +P M +VP ++E++ G + + R+ + ++
Sbjct: 270 FFSCGCTQTYTSIRHLKEDLPRVKPIVMATVPRLWESIKLGFEDAVDKMPRLRKTLIKSA 329
Query: 147 IRISFAYT-AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKK 205
I S AY A +++Y F + + + I+ L + +P+H ++ ++ K
Sbjct: 330 ISNSKAYKLARRKLY--FLTIESVSSFEQISSFIEIL-------LRYPMHRISSIYLWPK 380
Query: 206 IQSAI--GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
I + I G + +SGGG++ HID F+EA+GV++ VGYGLTE+SPV+ RRP N+ G
Sbjct: 381 ILTKICGGRLRFPISGGGAIAPHIDSFFEALGVELLVGYGLTETSPVLTCRRPWRNIRGG 440
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
G P+ TEIKIVD ET ++ KG+V RG Q+M GY S +K+ LD GW NTG
Sbjct: 441 AGQPLPETEIKIVDPETFQIKKLRQKGLVLARGPQIMSGYLGKRSESKKVLDATGWFNTG 500
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+G + G L+L GRAKDTIVLS+GEN+EP LEE + SSLI Q ++
Sbjct: 501 DLGMLL----------SDGSLILTGRAKDTIVLSSGENIEPGPLEECLIASSLIEQAFLL 550
Query: 384 GQDQRRPGAIIVPDKEEV 401
GQDQ+ A+IVP + V
Sbjct: 551 GQDQKYLAALIVPRIDHV 568
>gi|33862488|ref|NP_894048.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str. MIT
9313]
gi|33640601|emb|CAE20390.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. MIT 9313]
Length = 664
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 165/416 (39%), Positives = 242/416 (58%), Gaps = 22/416 (5%)
Query: 28 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI 87
AT +YTSGTTG PKGV L+H NLLHQ+R L + G LS+LP WH YER+ Y+
Sbjct: 217 ATILYTSGTTGQPKGVPLSHANLLHQMRCLACVAFPSPGAPVLSVLPIWHAYERSAEYYF 276
Query: 88 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 147
FS YT ++ LK DL R +P M +VP ++E + +G + + R+ L+
Sbjct: 277 FSCACTQSYTTIKQLKRDLPRVRPIVMATVPRLWEAIQAGFDEAVKGMPTGRQ----RLL 332
Query: 148 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 207
R++ A + +R R++ + L A + + WPLH LA L++ K+
Sbjct: 333 RMALANSGSQRK----AWRRSRNLLLEPLPLTTRTLALLEATLRWPLHGLAGALLWPKVL 388
Query: 208 SAI--GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 265
+ + G + ++GGG++ H+D F+EA+G+++ VGYGLTE+SPV++ RRP N+ GS G
Sbjct: 389 NQLCGGRLRFPINGGGAIAPHVDAFFEAVGLELLVGYGLTETSPVVSCRRPWRNIRGSSG 448
Query: 266 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 325
P+ TE +IVD E+ L +G V VRG QVM GY + P AT + LD GW +TGD+
Sbjct: 449 PPLPETEFRIVDPESGVDLMFRQRGRVLVRGPQVMAGYLRKPEATAKVLDGQGWFDTGDL 508
Query: 326 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 385
G + P G LVL GRAKDTIVLS+GEN+EP LE A + S L+ Q++++GQ
Sbjct: 509 GMLLPD----------GSLVLTGRAKDTIVLSSGENIEPGPLEAALVASPLLEQVMLVGQ 558
Query: 386 DQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS--KEKTISLLYGELRKWTSKCS 439
D+R+ A++VP +EE+L A+ ++ S E LL GEL + ++ S
Sbjct: 559 DERQLAALVVPREEEMLAWAEDQGLLMQTGLSGSPGDEALRRLLRGELNRLLAQRS 614
>gi|298711624|emb|CBJ32681.1| long chain acyl-CoA synthetase [Ectocarpus siliculosus]
Length = 725
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 164/375 (43%), Positives = 225/375 (60%), Gaps = 23/375 (6%)
Query: 28 ATYVYTSGTTGNPKGVMLTHKNLLHQI------RSLYDIVPAENGDKFLSMLPPWHVYER 81
AT VYTSGTTG PKG +LTH NLLHQ+ RS + GD F+S+LP WH++ER
Sbjct: 247 ATLVYTSGTTGKPKGAVLTHANLLHQVSQNSFDRSEGSPMNPWVGDVFVSILPCWHIFER 306
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
YF +RG+ + Y+ VRN K DL++++PH++I VP + ET++ G+Q Q+ S +
Sbjct: 307 TAEYFTLTRGVTMGYSNVRNFKSDLKKFKPHFLIVVPRLLETIWKGVQTQLEAKSKGAQK 366
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
A AL R+S R + G + R+ K AL + ++ + PL L AEKL
Sbjct: 367 AAGALTRVSSLRMKAARRFSGTVI-RDSKPKGPEKAL-----SAVLMGVTLPLKLAAEKL 420
Query: 202 VYKKIQSAIGISKAGVSGG-GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
V+ KI+ +G V G SLP ++ F+E GV+V VGYGLTE+SPVIA R T N
Sbjct: 421 VWGKIRDGVGGRVKVVVSGGSSLPSFLEDFFEMAGVRVLVGYGLTETSPVIANRVATENT 480
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
G+ G P+ +E+KI D ET + + G G + +RG QVM GY NP AT +D+DG+
Sbjct: 481 KGTTGKPVPGSEVKIADQETGQQVAVGQTGKILIRGPQVMSGYQNNPEATAAVIDKDGYF 540
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA-ALRSSLIRQ 379
+TGD+G P G L++ GRAKDTIVLS GENVEP LE+A + SLI Q
Sbjct: 541 DTGDLGRFNP---------ITGDLIVTGRAKDTIVLSNGENVEPQPLEDAISGACSLIDQ 591
Query: 380 IVVIGQDQRRPGAII 394
+++ GQD+R GAI+
Sbjct: 592 VMLFGQDERFLGAIV 606
>gi|332298944|ref|YP_004440866.1| o-succinylbenzoate--CoA ligase [Treponema brennaborense DSM 12168]
gi|332182047|gb|AEE17735.1| Long-chain-fatty-acid--CoA ligase., o-succinylbenzoate--CoA ligase
[Treponema brennaborense DSM 12168]
Length = 635
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 174/439 (39%), Positives = 250/439 (56%), Gaps = 29/439 (6%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+A ++TSGTTG PKGVMLTH N L Q+ L + + GDK L +LP WH ++R C
Sbjct: 185 DDLACIIFTSGTTGEPKGVMLTHGNFLTQLDELQERIYLYPGDKALCVLPVWHAFQRLCE 244
Query: 85 YFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y I + L Y+ L D Q+ P + +VP V+E++Y G+ + + + A +
Sbjct: 245 YVILCQAAALCYSKPVGSILLADFQKLNPQLLPAVPRVFESVYEGVFRLMRKTGGAVYAL 304
Query: 143 ARALIRISFAYTAF-KRIYEGFCLTRNQKQ-PSYLVALIDWLWARIICAILWPLHLLAEK 200
R + ++ +R++ N PS++V ++ WL +L+P+ LL
Sbjct: 305 FRFFTAAAILHSKIDRRLFRKTARFGNDFLIPSWIVLVLPWL-------LLYPIKLLGGV 357
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LV+KKI++ +G S + GVSGGG+LP ID F+ AIGV + GYGLTE++PV++ R
Sbjct: 358 LVFKKIRAKLGNSFRGGVSGGGALPPQIDEFFWAIGVNIVEGYGLTETAPVVSVRPLRKP 417
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
V G+VG I E++IVDA+ N VLPAG KG+V+VRG VM+GY++ T + + GW
Sbjct: 418 VFGTVGSAIRGVEVRIVDAQGN-VLPAGKKGVVQVRGGTVMKGYYRRDDLTANVMRDGGW 476
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
+TGDIG + G +VL GR KDTIVL GENVEPL +E S I Q
Sbjct: 477 FDTGDIGMLT----------VDGEIVLRGRMKDTIVLRGGENVEPLPIEMRLNESRYIAQ 526
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD-ASELSKEKTISLLYGELR-KWTSK 437
VVIGQDQR GA+IVP +E+V A I + D S L +++ I L E++ +K
Sbjct: 527 SVVIGQDQRYLGALIVPSQEDVTAFADENCIRYTDYQSLLKQDEIIKLFDSEIQGAINAK 586
Query: 438 CSF----QIGPIHVVDEPF 452
F +IG ++ +PF
Sbjct: 587 NGFKLFEKIGRFALLAKPF 605
>gi|254525931|ref|ZP_05137983.1| putative AMP-binding enzyme [Prochlorococcus marinus str. MIT 9202]
gi|221537355|gb|EEE39808.1| putative AMP-binding enzyme [Prochlorococcus marinus str. MIT 9202]
Length = 647
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 166/407 (40%), Positives = 234/407 (57%), Gaps = 27/407 (6%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+AT +YTSGTTG PKGV L+H N LHQI +L I E G LS+LP WH YER+
Sbjct: 198 DDVATILYTSGTTGKPKGVPLSHANFLHQIINLAYIADPEPGTSVLSVLPIWHSYERSAE 257
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
YF FS G YT + LKDD+ + +P M +VP ++E ++ G + + ++ + +
Sbjct: 258 YFFFSCGCSQYYTIPKFLKDDITQIKPVVMATVPRLWEAIHDGFFQALKKMPFKKQKLIK 317
Query: 145 ALIRISFAYTAFKRIYEGF-CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
LI S + FKR L NQ + L+ +IC +PLH L+ ++
Sbjct: 318 FLISNS---SVFKRSLRKIRNLDINQITFESKIPLL----GSVICR--YPLHKLSNIFLW 368
Query: 204 KKIQSAIGISKAG--VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
I + K ++GGG+LP H+DLF+E++G+ V VGYGLTE+SPV+ RR NV
Sbjct: 369 PNILRQLCGEKLKFPINGGGALPEHVDLFFESLGIDVLVGYGLTETSPVLTCRRRELNVR 428
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
GS G P+ TEIKIV+ + ++L G + VRG QVM+GY N ATK L +DGW +
Sbjct: 429 GSSGQPLAFTEIKIVNDDKKKILKFREVGKILVRGPQVMKGYLNNEIATKDVLSKDGWFD 488
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD+G++ P+ G L + GRAKDTIVLS+GEN+EP LE L S I QI
Sbjct: 489 TGDLGFLIPN----------GSLFITGRAKDTIVLSSGENIEPNPLETEILSSEFINQIQ 538
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
++GQD++ A++VP+ E V + + D S+L+ K I +
Sbjct: 539 LVGQDKKCLTALVVPNVELV-----KSKFLEEDLSKLNLNKNIGTFF 580
>gi|157412815|ref|YP_001483681.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. MIT 9215]
gi|157387390|gb|ABV50095.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. MIT 9215]
Length = 647
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 165/406 (40%), Positives = 233/406 (57%), Gaps = 25/406 (6%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+AT +YTSGTTG PKGV L+H N LHQI +L I E G LS+LP WH YER+
Sbjct: 198 DDVATILYTSGTTGKPKGVPLSHANFLHQIINLAYIADPEPGTSVLSVLPIWHSYERSAE 257
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
YF FS G YT + LKDD+ + +P M +VP ++E ++ G + + ++ + +
Sbjct: 258 YFFFSCGCSQYYTIPKFLKDDITQIKPVVMATVPRLWEAIHDGFFQVLKKMPFKKQKLIK 317
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
LI S + + R L NQ + L+ +IC +PLH L+ ++
Sbjct: 318 FLIGNSSVFKSSLRKIRN--LDINQITFKSKIPLL----GSVICR--YPLHKLSNIFLWP 369
Query: 205 KIQSAIGISKAG--VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
I + K ++GGG+LP H+DLF+E++GV V VGYGLTE+SPV+ RR NV G
Sbjct: 370 NILRQLCGEKLKFPINGGGALPEHVDLFFESLGVDVLVGYGLTETSPVLTCRRRELNVRG 429
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S G P+ TEIKIV+ + ++L G + VRG QVM+GY N ATK L +DGW +T
Sbjct: 430 SSGQPLAFTEIKIVNDDKKKILKFREVGKILVRGPQVMKGYLNNEIATKDVLSKDGWFDT 489
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD+G++ P+ G L + GRAKDTIVLS+GEN+EP LE L S I QI +
Sbjct: 490 GDLGFLIPN----------GSLFITGRAKDTIVLSSGENIEPNPLETEILSSEFINQIQL 539
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
+GQD++ A++VP+ E V + + D S+L+ K I +
Sbjct: 540 VGQDKKCLTALVVPNIELV-----KSKFLEEDLSKLNLNKNIGTFF 580
>gi|123967990|ref|YP_001008848.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str.
AS9601]
gi|123198100|gb|ABM69741.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. AS9601]
Length = 647
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 164/410 (40%), Positives = 229/410 (55%), Gaps = 33/410 (8%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+AT +YTSGTTG PKGV LTH N LHQI +L I E G LS+LP WH YER+
Sbjct: 198 DDVATILYTSGTTGKPKGVPLTHANFLHQIINLAYIADPEPGTCVLSVLPIWHSYERSAE 257
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
YF FS G YT + LKDD+ + +P M +VP ++E ++ G + + + ++ + +
Sbjct: 258 YFFFSCGCSQYYTIPKFLKDDITQIKPVVMATVPRLWEAIHDGFFQALKKMPSKKQKLIK 317
Query: 145 ALIRISFAYTAFKRIYEGFCLTR---NQKQPSYLVALIDWLWARIICAILWP---LHLLA 198
LI S + R F + + K P + + ++ LWP L
Sbjct: 318 FLISNSSVFKRSLRKIRNFDINKITFKSKIPLLGSVISRYPLHKLSTIFLWPNILRQLCG 377
Query: 199 EKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
EKL K ++GGG+LP H+DLF+E++GV V VGYGLTE+SPV+ RR
Sbjct: 378 EKL------------KFPINGGGALPEHVDLFFESLGVDVLVGYGLTETSPVLTCRRREL 425
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
NV GS G P+ TEIKIV+ + +L G + VRG QVM+GY N AT + L +DG
Sbjct: 426 NVRGSSGQPLAFTEIKIVNDDKKNILKFREVGKILVRGPQVMKGYLNNEIATNEVLSKDG 485
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
W +TGD+G++ P+ G L + GRAKDTIVLS+GEN+EP LE L S I
Sbjct: 486 WFDTGDLGFLIPN----------GSLFITGRAKDTIVLSSGENIEPNPLETEILSSEFIN 535
Query: 379 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
QI ++GQD++ A++VP+ E V + + D S+L+ K I +
Sbjct: 536 QIQLVGQDKKCLTALVVPNVELV-----KSKFLEEDISKLNLNKNIGTFF 580
>gi|384252453|gb|EIE25929.1| long-chain-fatty-acid CoA ligase [Coccomyxa subellipsoidea C-169]
Length = 476
Score = 283 bits (725), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 213/356 (59%), Gaps = 42/356 (11%)
Query: 42 GVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN 101
GVMLTH NL +Q+ +L + + G++ LS+LPPWH+YER+CGY++FSR +YT +R
Sbjct: 95 GVMLTHGNLKYQMDNLSFFLKPKPGERSLSLLPPWHIYERSCGYYLFSRACTQVYTNIRK 154
Query: 102 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 161
++DL Y PH+ + VP+V +TLY +Q+QI SS +R +AR I AY +RI +
Sbjct: 155 FREDLSAYPPHHFVCVPMVLDTLYGRVQQQIKKSSLVKRTIARLFFAIGAAYIRARRILD 214
Query: 162 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGG 221
G LV+ KI++A+GI +SGGG
Sbjct: 215 GV-------------------------------------LVFGKIRAALGIMSTVISGGG 237
Query: 222 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC--NVLGSVGHPINHTEIKIVDAE 279
SL H+D FYE + + V G+GLTE+SPV++ RR NV GSVG PI T +++VD E
Sbjct: 238 SLARHLDDFYETLALPVLNGWGLTETSPVLSCRRDATRENVRGSVGLPIPGTVVRVVDPE 297
Query: 280 TNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL-DEDGWLNTGDIGWIAPHHSRGRSR 338
T +P G +G++ +G VM+GYF + +AT +A DGW +TGD+GW AP G +
Sbjct: 298 TLRPVPEGQQGLLLAKGPGVMKGYFNDEAATAKAFVAGDGWFDTGDLGWRAPTGVAGSN- 356
Query: 339 RCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 394
G +VL GRAKDTIVLS+GENVEP +E+A S I+ +V++GQD R GA++
Sbjct: 357 -MAGHIVLTGRAKDTIVLSSGENVEPAPIEDACAVSPFIQHLVLVGQDHRMLGALV 411
>gi|126695760|ref|YP_001090646.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str. MIT
9301]
gi|126542803|gb|ABO17045.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. MIT 9301]
Length = 647
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 165/407 (40%), Positives = 235/407 (57%), Gaps = 27/407 (6%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+AT +YTSGTTG PKGV LTH N LHQI +L I E G LS+LP WH YER+
Sbjct: 198 DDVATILYTSGTTGKPKGVPLTHANFLHQIINLAYIADPEPGTSVLSVLPIWHSYERSAE 257
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
YF FS G YT + LKDD+ + +P M +VP ++E ++ G + + + ++ + +
Sbjct: 258 YFFFSCGCTQYYTIPKFLKDDITQIKPVVMATVPRLWEAIHDGFFQALKKMPSKKQKLIK 317
Query: 145 ALIRISFAYTAFKRIYEGF-CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
LI S + FKR + NQ + L+ + +R +PLH L+ ++
Sbjct: 318 FLISNS---SVFKRSLRKIRNIDINQITFKSKIPLLGSVISR------YPLHKLSTIFLW 368
Query: 204 KKIQSAIGISKAG--VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
I + K ++GGG+LP H+DLF+E++GV V VGYGLTE+SPV+ RR NV
Sbjct: 369 PNILRQLCGEKLKFPINGGGALPEHVDLFFESLGVDVLVGYGLTETSPVLTCRRRELNVR 428
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
GS G P++ TEIKIV+ + ++L G + VRG QVM+GY N AT L +DGW +
Sbjct: 429 GSSGQPLSFTEIKIVNDDKKKILKFREVGKILVRGPQVMRGYLNNEIATNDVLSKDGWFD 488
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD+G++ P+ G L + GRAKDTIVLS+GEN+EP LE L S I QI
Sbjct: 489 TGDLGFLIPN----------GSLFITGRAKDTIVLSSGENIEPNPLETEILSSEFINQIQ 538
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
++GQD++ A++VP+ E V + + D S+L+ K I +
Sbjct: 539 LVGQDKKCLTALVVPNVELV-----KSKFLEEDLSKLNLNKKIGTFF 580
>gi|78778783|ref|YP_396895.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str. MIT
9312]
gi|78712282|gb|ABB49459.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. MIT 9312]
Length = 647
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 175/445 (39%), Positives = 247/445 (55%), Gaps = 46/445 (10%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+AT +YTSGTTG PKGV LTH N LHQI +L I G LS+LP WH YER+
Sbjct: 198 DDVATILYTSGTTGKPKGVPLTHANFLHQIINLAHIADPGPGTSVLSVLPIWHSYERSAE 257
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
YF FS G YT + LKDD+ + +P M +VP ++E ++ G + + + ++ + +
Sbjct: 258 YFFFSCGCTQYYTIPKFLKDDITQIKPVVMATVPRLWEAIHDGFFQALKKMPSKKQKLIK 317
Query: 145 ALIRISFAYT-AFKRI--YEGFCLTRNQKQPSYLVALIDWLWARIICAILWP---LHLLA 198
LI S + + ++I + F T K P L + ++ LWP L
Sbjct: 318 FLISNSSVFKISLRKIRNLDIFQTTFIAKIPLLFSVLGRYPLHKLSSVFLWPNILRQLCG 377
Query: 199 EKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
EKL K ++GGG+LP H+DLF+E++G+ V VGYGLTE+SPV+ RR
Sbjct: 378 EKL------------KFPINGGGALPEHVDLFFESLGIDVLVGYGLTETSPVLTCRRREL 425
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
NV GS G P+ TEIKIV+ + ++L G + V+G QVM+GY N ATK L +DG
Sbjct: 426 NVRGSSGQPLAFTEIKIVNEDKKKILKFREVGKILVKGPQVMKGYLNNDLATKDVLSKDG 485
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
W +TGD+G++ P+ G L + GRAKDTIVLS+GEN+EP LE L S I
Sbjct: 486 WFDTGDLGFLIPN----------GSLFITGRAKDTIVLSSGENIEPNPLETEILSSEFIN 535
Query: 379 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI---------SLLYG 429
Q+ ++GQD++ A++VP+ E V + + D S+L+ K I +LL G
Sbjct: 536 QVQLVGQDKKCLTALVVPNVELV-----KNKFLEEDLSKLNLNKNIGIFFKSQINNLLKG 590
Query: 430 ELRKWTSKCSFQIGPIHVVDEPFTV 454
L T + QI + VD PFT+
Sbjct: 591 RLGARTEE---QILDCYFVD-PFTL 611
>gi|91070346|gb|ABE11263.1| putative long-chain-fatty-acid--CoA ligase [uncultured
Prochlorococcus marinus clone HF10-88F10]
Length = 647
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 165/407 (40%), Positives = 234/407 (57%), Gaps = 27/407 (6%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+AT +YTSGTTG PKGV LTH N LHQI +L I E G LS+LP WH YER+
Sbjct: 198 DDVATILYTSGTTGKPKGVPLTHANFLHQIINLAYIADPEPGTSVLSVLPIWHSYERSAE 257
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
YF FS G YT + LKDD+ + +P M +VP ++E ++ G + + ++ + +
Sbjct: 258 YFFFSCGCSQYYTIPKFLKDDITQIKPVVMATVPRLWEAIHDGFFQALKKMPFKKQKLIK 317
Query: 145 ALIRISFAYTAFKRIYEGF-CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
LI S + FKR + NQ + L+ + +R +PLH L+ ++
Sbjct: 318 FLISNS---SVFKRSLRKIRNIDINQITFKSKIPLLGSVISR------YPLHKLSTIFLW 368
Query: 204 KKIQSAIGISKAG--VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
I + K ++GGG+LP H+DLF+E++GV V VGYGLTE+SPV+ RR NV
Sbjct: 369 PNILRQLCGEKLKFPINGGGALPEHVDLFFESLGVDVLVGYGLTETSPVLTCRRRELNVR 428
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
GS G P+ TEIKIV+ + ++L G + V+G QVM+GY N ATK L +DGW +
Sbjct: 429 GSSGQPLAFTEIKIVNDDKKKILKFREVGKILVKGPQVMKGYLNNELATKDVLSKDGWFD 488
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD+G++ P+ G L + GRAKDTIVLS+GEN+EP LE L S I QI
Sbjct: 489 TGDLGFLIPN----------GSLFITGRAKDTIVLSSGENIEPNPLETEILSSEFINQIQ 538
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
++GQD++ A++VP+ E V + + D S+L+ K I +
Sbjct: 539 LVGQDKKCLTALVVPNLELV-----KNKFLEEDLSKLNLNKNIGTFF 580
>gi|224003691|ref|XP_002291517.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973293|gb|EED91624.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 792
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 176/482 (36%), Positives = 254/482 (52%), Gaps = 64/482 (13%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI------RSLYDIVPAENGDKFLSMLPP 75
I D++T VYTSGTTG PKGVMLTH NLLHQ YD G+ LS+LP
Sbjct: 301 IDRSDLSTIVYTSGTTGRPKGVMLTHGNLLHQTGHRMAPTRPYDETEPLPGELMLSLLPV 360
Query: 76 WHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 135
WH+ ER F+ RG ++Y+ +R K+DL +YQP +M+ VP V E + G+Q + +
Sbjct: 361 WHITERTFELFMLVRGCHVVYSGIRWFKNDLAKYQPQWMVLVPRVLEKVAFGVQDKFASG 420
Query: 136 SAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLH 195
AA + + + S ++I +G + P +D + + II L PL+
Sbjct: 421 GAAVKALVKLFTATSTLKNKHQKIRKGLVVGDEPPTP------MDGIISTIIVKALAPLN 474
Query: 196 LLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
L KLV+KK+Q G + +SGG +L ++ FYE G+ + VGYGLTE SP+++ R
Sbjct: 475 FLGNKLVWKKVQDGFGGRQRVIISGGSALAGSLETFYENCGIDILVGYGLTECSPLLSYR 534
Query: 255 RPTCNVL--GSVGHPINHTEIKIVDAETN------EVLPAGSKGIVKVRGSQVMQGYFKN 306
R N++ G VG TE+++VD E N + LP G G+V RG QVM+GY+KN
Sbjct: 535 RTDSNLVTAGCVGFAATDTELRVVDPEANPENGERKALPDGLAGVVLGRGPQVMKGYYKN 594
Query: 307 PSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLE 366
P AT +A+D+ GW +TGD+G I P G L+L GRAKDTIVLS GEN+EP
Sbjct: 595 PEATGKAVDKWGWFDTGDLGRINP---------ATGDLILTGRAKDTIVLSNGENIEPQP 645
Query: 367 LEEAAL-RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA-------AKRL---------- 408
+E+A + S L+ Q+++ GQD R AI V E++ A AK++
Sbjct: 646 IEDAIMSESDLVEQVMLSGQDGRSLIAITVLSPNELVNAGLLEESRAKQILKDHDIVNDP 705
Query: 409 ------------SIVHADASELSKEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPF 452
+ A A +K + E+++ TS SF Q+ ++V EPF
Sbjct: 706 KCSEEECAEACERLAKASAEIRAKGAVTKQVASEVKRATSSGSFRKWEQVSDVYVTLEPF 765
Query: 453 TV 454
+
Sbjct: 766 AM 767
>gi|307718544|ref|YP_003874076.1| hypothetical protein STHERM_c08540 [Spirochaeta thermophila DSM
6192]
gi|306532269|gb|ADN01803.1| hypothetical protein STHERM_c08540 [Spirochaeta thermophila DSM
6192]
Length = 636
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 156/407 (38%), Positives = 238/407 (58%), Gaps = 26/407 (6%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+AT +YTSGTTG PKGVML H++ + QI L + E GD FLS+LP WH +ERA
Sbjct: 186 DDLATIIYTSGTTGEPKGVMLPHRSFIFQIDKLKKPLNVEVGDIFLSILPIWHSFERAVD 245
Query: 85 YFIFSRGIELMYTAV--RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y + RG + Y+ + L +D+ + +P ++ +VP V+E + + + + + A RV+
Sbjct: 246 YILMERGGAVAYSKPVGKILLEDMTKVRPQWLAAVPRVFEGIRNAVYRNVNKGPAVSRVL 305
Query: 143 ARALIRISFAYTAFKRIYEGFC---LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + Y F ++ G L RN+ ++D + A + A+L P L E
Sbjct: 306 FHFFVGVGELYAYFSNMFRGLLPDFLPRNR--------ILDKVVAFVPLALLAPFRGLGE 357
Query: 200 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
LV++K+++ +G K GVSGGG+LP H+D F++A+G++V GYGLTE+ PV+A R
Sbjct: 358 VLVFRKLKAKLGGRFKTGVSGGGALPPHVDTFFQAVGIQVLEGYGLTETGPVLAVRDQKA 417
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
++G+VG ++ E K++D N LP G KG++ V+ QVM GY+K P AT + L +DG
Sbjct: 418 PMVGTVGPLLDEVEYKVLDEHGNP-LPPGHKGVLWVKSPQVMLGYYKRPEATAEVL-KDG 475
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
WLNTGD+ + GR + GRAKDTIVL GENVEP +EE S I
Sbjct: 476 WLNTGDL----VRFTHGRE------FAIVGRAKDTIVLRGGENVEPGPIEEKLKESEFIE 525
Query: 379 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS 425
VV+GQDQ+ GA+IVP++E + A+ + + + +L ++ +
Sbjct: 526 NAVVVGQDQKFLGALIVPNRERIEEYAREKGLSYMEYEDLVEQAEVQ 572
>gi|387192078|gb|AFJ68636.1| long-chain acyl-CoA synthetase [Nannochloropsis gaditana CCMP526]
Length = 671
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 170/466 (36%), Positives = 261/466 (56%), Gaps = 53/466 (11%)
Query: 27 IATYVYTSGTTGNPKGVMLTHKNLLHQIR--SLYDI---VPAEN---GDKFLSMLPPWHV 78
+AT VYTSGTT PKGV+L H NLLHQ+ S D PA N GD +S+LP WH+
Sbjct: 192 VATLVYTSGTTNKPKGVVLRHSNLLHQVNYNSFTDSPSKEPAYNPVLGDVLVSVLPCWHI 251
Query: 79 YERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
+ER Y++FS+GI ++Y+ V+N K DL ++QP ++++VP + ET+Y G+ ++ T A
Sbjct: 252 FERTAEYWMFSKGIHVVYSNVKNFKADLAKHQPQFIVAVPRLLETIYRGVLQKFATEKGA 311
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
++ + R+ A+ R+ G L P I+ L A ++ +L PL +
Sbjct: 312 KKKIIEFFTRVGSAWVKAWRVARGLVLRSRAPNP------IERLLALVLALVLSPLAAVG 365
Query: 199 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+KLV+ K+++ +G K V+GG S+P+ ++ F+E + V VGYG+TE+SPVI R
Sbjct: 366 DKLVWSKVRAGLGGRIKVLVAGGSSMPLVLEDFFELLRTPVIVGYGMTETSPVITNRVAE 425
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
N+ GSVG TE+KIVD E+ LP G G+V +RG Q+M GY N A+K LD++
Sbjct: 426 KNLAGSVGRTARDTEVKIVDPESGARLPEGQPGLVLMRGPQMMAGYKSNAEASKAVLDQE 485
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL-RSSL 376
G+L+TGD+G I P L++ GRAKDTIVLS GENVEP +E+ S+L
Sbjct: 486 GFLDTGDLGRIHPLTKH---------LIITGRAKDTIVLSNGENVEPQPIEDVVCANSAL 536
Query: 377 IRQIVVIGQDQRRPGAIIVPDKE-----------------EVL--------MAAKRLSIV 411
+ Q++ +GQD++ G ++VP+ E+L +A R +
Sbjct: 537 VDQVMCVGQDEKVLGMLVVPNVRALARAGLVDRGLAERVAELLGGQVLTNGIAGSRAELE 596
Query: 412 HADASELSKEKTISLLYGELRKWTSKC---SFQIGPIHVVDEPFTV 454
+AS K++ L ++ + K + ++G + VV EPF +
Sbjct: 597 EVEASLREKKEVKKALLADIARAMGKSFRETERVGAVEVVLEPFNM 642
>gi|408794606|ref|ZP_11206211.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408461841|gb|EKJ85571.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 624
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 158/414 (38%), Positives = 244/414 (58%), Gaps = 27/414 (6%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+ T +YTSGTTG PKGVMLTH+N+++ + + V ++ D+ LS+LP WH++ERA
Sbjct: 178 DDLFTIIYTSGTTGMPKGVMLTHQNMVYNVVKVPPRVGLKSSDRTLSILPVWHIFERAID 237
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
Y I + G + YT +R+L+DD Q+ +P +M S P ++E LY GI++++ + +R +
Sbjct: 238 YAIIAEGASIAYTNIRDLRDDFQKIKPSFMASAPRLWENLYQGIKQKLEKAPENKRKL-- 295
Query: 145 ALIRISFAYTAFKRIYEG-FCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA---EK 200
FAY K+ +G L N+ Q + + L LL+ +
Sbjct: 296 ----FDFAYDICKKFKDGQDYLAGNKLQTKEESPFERAKNTAVSLGYVLNLFLLSKVLDG 351
Query: 201 LVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LV+ KI+ +G G +SGGG+LP H+D F+ IG+ V GYG+TE +P+I+ R
Sbjct: 352 LVFSKIRDVLGGHLTGTISGGGALPAHVDEFFNVIGIPVYEGYGMTECAPIISVRSVGNV 411
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
V GSVG T +K+V+ + E +P G GI+ ++G QVM+GY+KN AT +A+ +DGW
Sbjct: 412 VQGSVGKWPEGTIVKVVN-DQGESVPKGKMGIIHIKGPQVMKGYYKNEEATSKAI-QDGW 469
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
+NTGD+G+I+ + + L + GR KDTIVL GENVEP+ +E L ++LI Q
Sbjct: 470 MNTGDLGFISFNDT----------LSVRGRVKDTIVLLGGENVEPVPIENLLLENALINQ 519
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRK 433
++V+GQDQ+ A+I PDKE + K + + +L++ K I L Y + K
Sbjct: 520 VIVVGQDQKSLTALIWPDKERM----KEAGLNPKEGEDLNQNKEIRLYYQNIVK 569
>gi|33860959|ref|NP_892520.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|33639691|emb|CAE18861.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
Length = 641
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 165/413 (39%), Positives = 231/413 (55%), Gaps = 39/413 (9%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+DIA+ +YTSGTTG PKGV LTH N LHQI +L +I E G LS+LP WH YER+
Sbjct: 198 NDIASILYTSGTTGKPKGVPLTHANFLHQIINLANIADPEPGTSVLSVLPIWHSYERSAE 257
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
YF FS G YT + LKDD+++ +P M +VP ++E ++ G +
Sbjct: 258 YFFFSCGCTQFYTNPKFLKDDIKQVKPVVMATVPRLWEAIHDGF---FLALKKMPPKKQK 314
Query: 145 ALIRISFAYTAFKRIYEGF-CLTRNQ----KQPSYLVALIDWLWA-RIICAILWP---LH 195
+ + + FKR L NQ + S +++I + +I LWP
Sbjct: 315 IIKILIKNSSIFKRNLRKIRNLEINQVSSLAKISLTISVIGRFFIHKISSTFLWPSILKQ 374
Query: 196 LLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
L EKL K ++GGG+LP H+DLF+E++G+ V VGYGLTE+SPV+ RR
Sbjct: 375 LCGEKL------------KFPINGGGALPEHVDLFFESLGIDVLVGYGLTETSPVLTCRR 422
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
NV GS G P+ TEIKI++ E +++L G + V+G QVM+GY N SATK L
Sbjct: 423 RELNVRGSSGQPLAFTEIKIMNEEKDKILKFKEIGKILVKGPQVMKGYLNNISATKDVLS 482
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
+DGW +TGD+G++ P+ G LV+ GRAKDTIVLS+GEN+EP LE L S
Sbjct: 483 KDGWFDTGDLGFLIPN----------GSLVITGRAKDTIVLSSGENIEPNPLETEILSSE 532
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
I Q+ ++GQD++ A++ P+ E V D S+L+ K I L +
Sbjct: 533 FINQVQLVGQDKKCLTALVAPNIELV-----ENKFFENDISKLNSNKKIGLFF 580
>gi|386347051|ref|YP_006045300.1| AMP-dependent synthetase and ligase [Spirochaeta thermophila DSM
6578]
gi|339412018|gb|AEJ61583.1| AMP-dependent synthetase and ligase [Spirochaeta thermophila DSM
6578]
Length = 636
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 162/443 (36%), Positives = 251/443 (56%), Gaps = 32/443 (7%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+AT +YTSGTTG PKGVML H++ + QI L + E GD FLS+LP WH +ERA
Sbjct: 186 DDLATIIYTSGTTGEPKGVMLPHRSFIFQIDKLKKPLDVEVGDIFLSILPIWHSFERAVD 245
Query: 85 YFIFSRGIELMYTAV--RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y + RG + Y+ + L +D+ + P ++ +VP V+E + + + + + A RV+
Sbjct: 246 YVLMERGGAVAYSKPVGKILLEDMAKVSPQWLAAVPRVFEGIRNAVYRNVNKGPAVSRVL 305
Query: 143 ARALIRISFAYTAFKRIYEGFC---LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + Y F ++ G L RN+ ++D + A + +L P L E
Sbjct: 306 FHFFVGVGQLYAYFSNMFRGLLPDFLPRNR--------ILDKVVAFLPLVLLAPFRGLGE 357
Query: 200 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
LV++K+++ +G K GVSGGG+LP H+D F++A+G++V GYGLTE+ PV+A R
Sbjct: 358 VLVFRKLKAKLGGRFKTGVSGGGALPPHVDTFFQAVGIQVLEGYGLTETGPVLAVRNQKA 417
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
++G+VG ++ E K+V E + LP G KG++ V+ QVM GY+K P AT + L +DG
Sbjct: 418 PMVGTVGPLLDEVEYKVV-GEHGDPLPPGHKGVLWVKSPQVMLGYYKRPEATAEVL-KDG 475
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
WLNTGD+ + GR + GRAKDTIVL GENVEP +EE S I
Sbjct: 476 WLNTGDL----VRFTHGRE------FAIVGRAKDTIVLRGGENVEPGPIEEKLKESEFIE 525
Query: 379 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI-SLLYGELRKWTS- 436
+V+GQDQ+ GA+IVP++E + A+ + + + +L ++ + + E+++ S
Sbjct: 526 NAMVVGQDQKFLGALIVPNRERIEEYAREKGLTYMEYEDLVEQAEVQEAINDEIQRLISP 585
Query: 437 ----KCSFQIGPIHVVDEPFTVN 455
K +I V+ +PF V
Sbjct: 586 AQGFKPFERIFRFEVIAKPFEVG 608
>gi|194477166|ref|YP_002049345.1| putative long-chain-fatty-acid--CoA ligase [Paulinella
chromatophora]
gi|171192173|gb|ACB43135.1| putative long-chain-fatty-acid--CoA ligase [Paulinella
chromatophora]
Length = 645
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 159/436 (36%), Positives = 250/436 (57%), Gaps = 27/436 (6%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 83
S +AT +YTSGTT PKGV LTH NLLHQIR+L +V + + LS+LP WH YER+
Sbjct: 202 SRRLATLIYTSGTTSKPKGVALTHSNLLHQIRTLRVVVEPHSNENTLSILPIWHAYERSI 261
Query: 84 GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
YF+ S G YT ++ L+ DLQ +P Y++SVP +++ L G + + + +
Sbjct: 262 EYFLLSCGCCQNYTNLKKLRKDLQHIKPIYLVSVPRLWQALMEGFEDNLSNLPSHVNYLI 321
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
R +++S + R + + + +L A I I WP H+LA ++
Sbjct: 322 RVFLKLSRYNRSRWRFAQNLSIQPVCNKARFL--------AGIEVLITWPSHVLASITIW 373
Query: 204 KKI-QSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
K+ Q +G + + GGG+L +ID F+EAIG+++ VGYGLTE+SPV+ RR + N+
Sbjct: 374 PKVRQQLVGDLLTTAICGGGALGAYIDSFFEAIGIELLVGYGLTETSPVLTCRRRSANIR 433
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
S G P+ T+++I+D+ + L G KG + RG QVM+GY++ + L+ + W +
Sbjct: 434 ESAGRPLPLTDLRIIDSSSARPLGWGEKGRILARGPQVMKGYYRESDSNMTILNGESWFD 493
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD+G++ P G L+L GRAK+TIVL+ GEN+EP+ LE S L+ QI+
Sbjct: 494 TGDLGYLLPD----------GSLILTGRAKETIVLNNGENIEPVVLEVTLSASPLVEQII 543
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS---KEKTISLLYGELRKWTSKC 438
+IGQDQR+ A+IVP E + + +I++ D + KE+ +L G + S+
Sbjct: 544 LIGQDQRQLAALIVPCFEAIGNLMQVRNILNNDLPLIMNAIKEELNRILAGRI---GSRL 600
Query: 439 SFQIGPIHVVDEPFTV 454
+ ++ I +V EPF++
Sbjct: 601 NERLAGIALV-EPFSI 615
>gi|374621808|ref|ZP_09694338.1| AMP-dependent synthetase and ligase [Ectothiorhodospira sp. PHS-1]
gi|373940939|gb|EHQ51484.1| AMP-dependent synthetase and ligase [Ectothiorhodospira sp. PHS-1]
Length = 629
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 159/421 (37%), Positives = 248/421 (58%), Gaps = 25/421 (5%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E I ++D+ T +YTSGTTG PKGVML H N++H IR+L ++ D ++S+LP WH++
Sbjct: 173 EPIQTEDLLTIIYTSGTTGTPKGVMLDHGNIMHNIRTLPPLIALNETDVWVSILPSWHIF 232
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ER Y +RG L+Y+++R DL+ Y+P + +VP V+E LY+ I ++ +
Sbjct: 233 ERTAEYIGIARGSCLVYSSIRTFAQDLETYRPTLVATVPRVWEALYTRITTELKKKDPKK 292
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQ----KQPSYLVALIDWLWARIICAILWPLH 195
V L+R+S Y +RI R+Q +P L D A + +L+ +
Sbjct: 293 ARVFSLLVRVSATYRRNQRIL------RDQLPVFAKPPVLRRAGDKTRAALTNVLLFLPN 346
Query: 196 LLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
LLA K ++ +Q G KA +SGGGSLP ++D + +AIG+++ YG+TE SP IA R
Sbjct: 347 LLARK-KFRLVQEKFGGRLKAAISGGGSLPPYLDEWIDAIGIRIINAYGMTECSPGIAGR 405
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
C+V G++G + TE++IVDA T++ LP G++G ++VRG+QV +GY+ N A QA
Sbjct: 406 GLGCHVFGTLGPAVGETELRIVDA-TDQPLPPGTEGEIQVRGAQVFKGYYDNDIANAQAF 464
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
DG+L TGD+G + G LV+ GRAKD IVL++GENV+P +E
Sbjct: 465 TNDGFLRTGDLGRMT----------LTGELVITGRAKDIIVLASGENVDPTNIEATLSMF 514
Query: 375 SLIRQIVVIGQDQRRPGAIIVPDKEEVL-MAAKRLSIVHADASELSKEK-TISLLYGELR 432
++ V++GQD++ GA+IVPD E++ ++ + + +A E K+K + L GE+
Sbjct: 515 PFVKDAVLVGQDKKGLGALIVPDMEKLREFVQEKYNQIVGEADEALKDKHLLDRLRGEMN 574
Query: 433 K 433
K
Sbjct: 575 K 575
>gi|397645678|gb|EJK76946.1| hypothetical protein THAOC_01260 [Thalassiosira oceanica]
Length = 777
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 160/421 (38%), Positives = 235/421 (55%), Gaps = 35/421 (8%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI------RSLYDIVPAENGDKFLSMLPP 75
+ D++T VYTSGTTG PKGVML+H NLLHQ YD G+ LS+LP
Sbjct: 287 MAKSDLSTIVYTSGTTGKPKGVMLSHGNLLHQTGHRLAPTKPYDESEPLPGELMLSLLPV 346
Query: 76 WHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 135
WH+ ER F+ SRG ++++ +R K+DL +++P +++ VP V E + G+Q +
Sbjct: 347 WHITERTFELFMLSRGCYVVFSGIRWFKNDLAKHRPQWLVLVPRVLEKVALGVQDKFAAG 406
Query: 136 SAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLH 195
S + + + + S +I G + + P D + + +I L PL+
Sbjct: 407 SVVVKGLVKLFTKTSTLKNKHSKIRNGLVVGSDAPTP------FDGIVSSLIVKALAPLN 460
Query: 196 LLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
+ KLV+ K+Q G K+ +SGG +L ++ FYE +G+ + VGYGLTE +P++A R
Sbjct: 461 FVGNKLVWSKVQDGFGGRQKSIISGGSALAGSLETFYENVGIDILVGYGLTECAPLLAHR 520
Query: 255 RPTCNVL--GSVGHPINHTEIKIVDAETNE------VLPAGSKGIVKVRGSQVMQGYFKN 306
R CN++ G VG P + TE+++VD E+ LP G G+V RG QVM+GY+KN
Sbjct: 521 RSDCNLVTAGCVGFPCSDTELRVVDPESKAEDGERISLPIGQAGVVIGRGPQVMKGYYKN 580
Query: 307 PSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLE 366
AT A+D G+ +TGD+G I P G L+L GRAKDTIVLS GEN+EP
Sbjct: 581 AEATSNAIDRFGFFDTGDLGRINP---------LTGDLILTGRAKDTIVLSNGENIEPQP 631
Query: 367 LEEAAL-RSSLIRQIVVIGQDQRRPGAIIV--PDK--EEVLMAAKRLSIVHADASELSKE 421
+E+A L SSL+ Q+++ GQD R AI V P+ E L+ A RL + D ++
Sbjct: 632 IEDAILSHSSLVEQVMLSGQDGRSLLAITVLNPNALVEAGLLDASRLKAIMNDYDAVNNP 691
Query: 422 K 422
K
Sbjct: 692 K 692
>gi|225619495|ref|YP_002720752.1| Long-chain acyl-CoA synthetase [Brachyspira hyodysenteriae WA1]
gi|225214314|gb|ACN83048.1| Long-chain acyl-CoA synthetases (AMP-forming) [Brachyspira
hyodysenteriae WA1]
Length = 625
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 166/449 (36%), Positives = 244/449 (54%), Gaps = 36/449 (8%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
K + ++ IAT +YTSGTTG PKGV+LTH N+LH +R L DI+ G+K L++LP WH
Sbjct: 169 KASKLTNESIATIIYTSGTTGKPKGVILTHGNILHNVRVLPDIIKLHPGEKLLTILPIWH 228
Query: 78 VYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
+YER Y G T R LK+D +P ISVP ++ +Y+ + K I SA
Sbjct: 229 IYERTISYVTAVTGCFTAITNKRYLKNDFTEEKPDIFISVPAIWVNIYNTVMKNIDRKSA 288
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCL-----TRNQKQPSYLVALIDWLWARIICAILW 192
R +A+ I+ S Y R +N K+ Y + + D ++
Sbjct: 289 FTRNLAKFFIKRSIKYIRSLRFQNDLIYLLGDENKNDKKAEYSIGMFDPIY--------- 339
Query: 193 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
H +A K+VY KI+ G + +SGGG+LPM+I+ F EA+G+ + VG+G+TE+SPV+
Sbjct: 340 --HKMATKMVYSKIRELTGGKMRLTISGGGALPMYIEDFIEAVGINLIVGWGITETSPVV 397
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 311
R P N G+ G PI +I++ D E N + G G+ ++G + + Y+K+P TK
Sbjct: 398 TLRSPYKNYRGTCGTPIPEVKIEVRDKEGN-ICKDGVMGVCYIKGPNIFKEYYKDPELTK 456
Query: 312 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 371
QA DG+ N+GD+G G +VL GRAK+TIVL TGENVEP +E A
Sbjct: 457 QA-KIDGFFNSGDLGTYTQQ----------GEIVLTGRAKETIVLLTGENVEPQPIENKA 505
Query: 372 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI-SLLYGE 430
L S I QI+++GQD+ GAIIV +KE + + I H D + L+ K + L+ E
Sbjct: 506 LESPYISQIMLVGQDKASTGAIIVINKENIKEHFDKQKI-HYDENTLASSKDVYKLMREE 564
Query: 431 LRKWTS-KCSFQ----IGPIHVVDEPFTV 454
L + + F+ I + + DE FT+
Sbjct: 565 LDNLINYRNGFRPYEAIAKMIITDEEFTI 593
>gi|183221027|ref|YP_001839023.1| putative long-chain-fatty-acid CoA ligase [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
gi|189911121|ref|YP_001962676.1| long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167775797|gb|ABZ94098.1| Long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167779449|gb|ABZ97747.1| Putative long-chain-fatty-acid CoA ligase [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 644
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 166/459 (36%), Positives = 254/459 (55%), Gaps = 35/459 (7%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS-LYDIVPAENGDKFLSMLPPW 76
+ + I DD+ T +YTSGTTG PKGVML H N++HQ + L ++ + ++ LS+LP W
Sbjct: 169 RMKAILPDDLFTIIYTSGTTGMPKGVMLKHSNMIHQTTAILGSMIDIKADERMLSILPVW 228
Query: 77 HVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT-- 134
HV+ER Y + G YT VR+L+DD+++ +P +M S P ++E++Y+GI +I
Sbjct: 229 HVFERVFEYLAIAAGCATYYTNVRDLRDDMKKAKPTFMASAPRLWESIYNGIYTRINDPK 288
Query: 135 -SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
+ A RR + S + A R +G + + P +V+L ++ + +L
Sbjct: 289 QTPAIRRGLFNLAYFFSKHFNASMRFLKGNQVDYVGRNP--IVSLFKGVYYLTVAIVLAV 346
Query: 194 LHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
+ L + +V KI+ A G KA VSGGG+L H+D F+ IG+ V GYG+TE+SPVI+
Sbjct: 347 PYFLLDLVVLSKIREATGGELKASVSGGGALQRHVDAFFNDIGINVLEGYGMTETSPVIS 406
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVD--------AETNEVLPAG---SKGIVKVRGSQVMQ 301
R V GSVG T ++I D + N L +G +G++ +RG QVM+
Sbjct: 407 VRTFKKLVQGSVGVITPETSVQIRDDLGKVLTHVDANNQLVSGKYGQRGVIHIRGPQVMK 466
Query: 302 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 361
GY+KNP T + L +DGW++TGDIG + L + GRAKDT+VL GEN
Sbjct: 467 GYYKNPETTAKVL-KDGWMDTGDIGMFNFKKT----------LTITGRAKDTVVLLGGEN 515
Query: 362 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL-SK 420
VEP+ +E+ S I Q +VIGQDQ+ GAI++PD ++++ AK I D +L
Sbjct: 516 VEPVPIEDKLTESPFISQCMVIGQDQKNLGAIVIPDFDQLMAWAKENGISETDKQKLIEN 575
Query: 421 EKTISLLYGELRKW-TSKCSF----QIGPIHVVDEPFTV 454
K + E++ +K F Q+ P ++ +PF V
Sbjct: 576 PKVLDFYKKEIKALNNTKTGFKSFEQVTPFILITKPFEV 614
>gi|392401755|ref|YP_006438367.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
gi|390609709|gb|AFM10861.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
Length = 628
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 167/419 (39%), Positives = 245/419 (58%), Gaps = 27/419 (6%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I DD+ T +YTSGTTG PKGVMLTH N++ QIR+L + D LS+LP WH++ER
Sbjct: 178 IKPDDLFTLIYTSGTTGAPKGVMLTHGNIISQIRNLP--LGFNRHDVMLSILPIWHIFER 235
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
A + G + +YT V++LK D+Q +P +M S P ++E++Y+GI ++ S +R
Sbjct: 236 AFEIISIASGAKTVYTNVKHLKADMQSVKPTFMASAPRLWESIYNGILTKVAEGSPIKRA 295
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR--IICAILWPLHLLAE 199
+ A I ++ Y R G L Q P + + + + +I A + P LL +
Sbjct: 296 LFHAAISVNHVYRQALREMRGQNL---QILPQNIFMRMAAILSSTLVIIATVVPA-LLLD 351
Query: 200 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
+V KI++A G +A +SGGG+LP+HID F+ IG+ V GYG+TE+SP+I+ R P
Sbjct: 352 AVVLSKIRAATGGRLRATISGGGALPLHIDEFFNDIGIAVLEGYGMTETSPIISVRLPEN 411
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVL-PA----GSKGIVKVRGSQVMQGYFKNPSATKQA 313
V+GSVG + TEI++VD T + P G KG + V+G QVM GY+KNP AT +
Sbjct: 412 AVIGSVGPLYSETEIRLVDIATGATIYPGRDYFGRKGELHVKGPQVMAGYYKNPEATAKV 471
Query: 314 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 373
L ++GW+NTGD+ + G L + GR+K+TIVL GENVEP+ +E L
Sbjct: 472 L-KNGWMNTGDLAIMT----------ANGCLKIVGRSKETIVLMNGENVEPVPIESKLLE 520
Query: 374 SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV--HADASELSKEKTISLLYGE 430
S LI Q +V+GQDQ+ A+IVP E + L + +A+ +L K +T L+ GE
Sbjct: 521 SPLIEQCMVVGQDQKFLAALIVPRTEALKQFGTDLQTLAQNAEVKKLLKAETHRLISGE 579
>gi|183221263|ref|YP_001839259.1| long-chain acyl-CoA synthetase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189911354|ref|YP_001962909.1| long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167776030|gb|ABZ94331.1| Long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167779685|gb|ABZ97983.1| Long-chain acyl-CoA synthetase, AMP-forming [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 624
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 157/414 (37%), Positives = 248/414 (59%), Gaps = 27/414 (6%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+ T +YTSGTTG PKGVMLTH+N+++ + + V ++ D+ LS+LP WH++ERA
Sbjct: 178 DDLFTIIYTSGTTGMPKGVMLTHQNMVYNVVKVPPRVGLKSTDRTLSILPVWHIFERAID 237
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
Y I + G + YT +R+L+DD Q+ +P +M S P ++E LY GI++++ + ++ +
Sbjct: 238 YAIITEGASIAYTNIRDLRDDFQKIKPSFMASAPRLWENLYLGIKQKLEKAPENKKKL-- 295
Query: 145 ALIRISFAYTAFKRIYEG-FCLTRNQ---KQPSYLVALIDWLWARIICAILWPLHLLAEK 200
FAY K+ +G L N+ K+ S + + + L+ L L +
Sbjct: 296 ----FDFAYDICKKFKDGQDYLAGNRLLTKEESPFERMKNTTVSIGYVLNLFLLAKLLDG 351
Query: 201 LVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LV+ KI+ +G G +SGGG+LP H+D F+ IG+ V GYG+TE +P+I+ R
Sbjct: 352 LVFSKIRDVLGGHLTGTISGGGALPSHVDEFFNVIGIPVYEGYGMTECAPIISVRSVGHV 411
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
V GSVG T ++IV+ E E +P G G++ ++G QVM+GY+KN ATK+A+ DGW
Sbjct: 412 VQGSVGKWPEGTAVRIVN-EQGESVPKGKMGVIHIKGPQVMKGYYKNEEATKKAI-VDGW 469
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
+NTGD+G+I+ + + L + GR KDTIVL GENVEP+ +E L ++LI Q
Sbjct: 470 MNTGDLGFISFNDT----------LSVRGRVKDTIVLLGGENVEPVPIENLLLENALINQ 519
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRK 433
++V+GQDQ+ A++ PDKE + K + + + +L++ K + L Y + K
Sbjct: 520 VIVVGQDQKSLTALVWPDKERM----KEVGLQWKEGEDLNQNKDVRLYYQNIVK 569
>gi|408794555|ref|ZP_11206160.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408461790|gb|EKJ85520.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 644
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 166/459 (36%), Positives = 253/459 (55%), Gaps = 35/459 (7%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS-LYDIVPAENGDKFLSMLPPW 76
+ + I DD+ T +YTSGTTG PKGVML H N++HQ L ++ + ++ LS+LP W
Sbjct: 169 RMKAIAPDDLFTIIYTSGTTGMPKGVMLKHSNMIHQTSVILGSMIEIKQDERMLSILPVW 228
Query: 77 HVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT-- 134
HV+ER Y + G YT VR+L+DD+++ +P +M S P ++E++Y+GI +I
Sbjct: 229 HVFERVFEYLAIAAGCATYYTNVRDLRDDMKKAKPTFMASAPRLWESIYNGIYTRINDPK 288
Query: 135 -SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
+ A RR + S + A R +G + + P +V+L + + IL
Sbjct: 289 QTPALRRGLFNLAYFFSKHFNAATRFLKGNQVDYVGRNP--IVSLFKGFYYLTVAIILAV 346
Query: 194 LHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
+ L + +V KI+ A G KA VSGGG+L H+D F+ IG+ V GYG+TE+SPVI+
Sbjct: 347 PYFLLDLVVLSKIREATGGELKASVSGGGALQRHVDAFFNDIGINVLEGYGMTETSPVIS 406
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVD--------AETNEVLPAG---SKGIVKVRGSQVMQ 301
R V GSVG T ++I D + N+ L +G ++G++ +RG QVM+
Sbjct: 407 VRTFKKLVQGSVGVITPETSVQIRDDLGKVLTHVDANQKLISGKYGARGVIHIRGPQVMK 466
Query: 302 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 361
GY+KNP T + L +DGW++TGDIG + L + GRAKDT+VL GEN
Sbjct: 467 GYYKNPETTAKVL-KDGWMDTGDIGMFNFKKT----------LTITGRAKDTVVLLGGEN 515
Query: 362 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL-SK 420
VEP+ +E+ S I Q++VIGQDQ+ GA++VPD +++ AK I D +L
Sbjct: 516 VEPVPIEDKLTESPYIAQVMVIGQDQKNLGALVVPDFDKLTEWAKENGISETDKQKLIEN 575
Query: 421 EKTISLLYGELRKW-TSKCSF----QIGPIHVVDEPFTV 454
K + E++ +K F Q+ P ++ + F V
Sbjct: 576 PKVLDFYKKEIKALNNTKTGFKSFEQVTPFILITKSFEV 614
>gi|374584914|ref|ZP_09658006.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
gi|373873775|gb|EHQ05769.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
Length = 640
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 155/408 (37%), Positives = 235/408 (57%), Gaps = 26/408 (6%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+ SDD+ T +YTSGTTG PKGVMLTH N++ Q+ + VP D+ LS+LP WH++ER
Sbjct: 187 LSSDDLFTLIYTSGTTGAPKGVMLTHANMISQLERIP--VPIRTDDRVLSILPVWHIFER 244
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
RG Y+ VR+L+DD++ P +M S P ++E++Y+GI + +S RR
Sbjct: 245 VFEMIALGRGCCTYYSNVRSLRDDMKNVAPTFMASAPRLWESVYAGILTNLEKASPVRRG 304
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
+ + +S + R +G L + S +++ LW+ + +L L +++
Sbjct: 305 LFALTLSVSRRFRGALRFLKGNELDITGR--SSFLSMFRALWSIVEVLLLAVPFFLLDRI 362
Query: 202 VYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
V KKI++A G + G SGGG+LP H+DLF+ G+ V GYGLTE+SPV++ R P V
Sbjct: 363 VLKKIRAATGGALRGTCSGGGALPYHVDLFFNDAGIPVLEGYGLTETSPVLSVRTPDLLV 422
Query: 261 LGSVGHPINHTEIKIVDAETNEVL---------PAGSKGIVKVRGSQVMQGYFKNPSATK 311
G+VG T+++I D T E+L G KG + VRG Q+M+GY+K+ +AT
Sbjct: 423 PGTVGPIYPDTDLRITDLNTGELLFTTEAGGPKRRGVKGEIHVRGPQIMKGYYKDQAATD 482
Query: 312 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 371
+ L +DGW NTGD+G + L + GR+K+TIVL GENVEP+ +E
Sbjct: 483 KVL-KDGWFNTGDLGMMT----------YNDCLKITGRSKETIVLLNGENVEPVPIENTL 531
Query: 372 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 419
L+S IRQ++V+GQD++ A+IVP+ E+ K + + D LS
Sbjct: 532 LQSPYIRQLIVVGQDKKYLTALIVPEIEK-FPGHKEFTTLAIDPEALS 578
>gi|256829470|ref|YP_003158198.1| AMP-dependent synthetase and ligase [Desulfomicrobium baculatum DSM
4028]
gi|256578646|gb|ACU89782.1| AMP-dependent synthetase and ligase [Desulfomicrobium baculatum DSM
4028]
Length = 629
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 154/446 (34%), Positives = 255/446 (57%), Gaps = 28/446 (6%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
++I +D+ T +YTSGTTG PKGVML H N++H +R+L ++ ++ D ++S+LP WH++
Sbjct: 173 DSISPEDVLTIIYTSGTTGTPKGVMLDHSNIMHNVRTLPPLIRLQSDDVWVSILPTWHIF 232
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ER Y + G L+Y+++R DL+ Y+P + +VP ++E+LYS I + +
Sbjct: 233 ERTAEYIGIANGSCLVYSSIRTFAADLESYKPTLVATVPRIWESLYSKITTGLKKKDPKK 292
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQ----KQPSYLVALIDWLWARIICAILWPLH 195
+ L+R+S AY R+ R+Q ++ S V D + A + L+ +
Sbjct: 293 AKIFNLLVRVSAAYRRNARVL------RDQLPVFQKKSLPVRFADKVQALVSNIFLFLPN 346
Query: 196 LLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LLA+K + + G K +SGGGSLP ++D + +AIG+++ YG+TE SP IA R
Sbjct: 347 LLAKKKLVLVQEKFGGRLKGAISGGGSLPPYLDEWIDAIGIRIINAYGMTECSPGIAGRG 406
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
C+V G++G P+ TE++IV+ + E +P G +G ++VRG+QV +GY+KN A A
Sbjct: 407 FNCDVFGTIGPPVGETELRIVN-DQGEPVPNGIEGEIQVRGAQVFKGYYKNDEANAGAFT 465
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
DG+L TGD+G + G LV+ GRAK+ IVL++GENV+P +E
Sbjct: 466 SDGFLRTGDLGRLT----------LTGELVITGRAKEIIVLASGENVDPTNIEATLSMFP 515
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEV--LMAAKRLSIVHADASELSKEKTISLLYGELRK 433
++ V++GQD++ GA+IVPD E++ + K ++ L ++ + L E+ K
Sbjct: 516 FVQDAVLVGQDKKGLGALIVPDLEKLREFVLEKYNQVLEETEGALRDKQLLDRLREEMNK 575
Query: 434 -WTSKCSF----QIGPIHVVDEPFTV 454
+K F ++ IH +D+ FT+
Sbjct: 576 LLNAKKGFKPYEKLQNIHFLDKEFTL 601
>gi|374586232|ref|ZP_09659324.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
gi|373875093|gb|EHQ07087.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
Length = 637
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 167/449 (37%), Positives = 253/449 (56%), Gaps = 36/449 (8%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+ DD+ T +YTSGTTG PKGVMLTH N++ Q+ ++ + D+ +S+LP WHV+ER
Sbjct: 180 VKEDDLFTLIYTSGTTGAPKGVMLTHANMVSQVLNMPSDINLTPSDRIVSILPVWHVFER 239
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
SRG+ YT +RN+++DL +P +M S P ++E +Y GI ++ A RR
Sbjct: 240 VFEMLAISRGVCTYYTNIRNIREDLAIVRPTFMASAPRLWENIYQGILAKVEGGPAVRRA 299
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
+ A S + R L + + P + L W R+ + L P +LL + +
Sbjct: 300 LFNAAYYCSRNFKGAVRFLSSRQLDTHGRNPGLSLLLGLWNILRLF-SFLIP-NLLLDLI 357
Query: 202 VYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
V KKI++A G+ + VSGGG+LP+H+D F+ IG+ V GYG+TE+SPV+A R V
Sbjct: 358 VLKKIRAATGGVLRGSVSGGGALPIHVDEFFNNIGIPVLEGYGMTETSPVLAVRTYKRLV 417
Query: 261 LGSVGHPINHTEIKIVDAETNEVL---PAGS------KGIVKVRGSQVMQGYFKNPSATK 311
G+VG +TE++++D +VL AGS KG + VRG QVM+GY+KNP AT
Sbjct: 418 PGTVGPIWPNTELRLIDIANGQVLYSTEAGSPQRRGVKGEIHVRGPQVMKGYYKNPEATN 477
Query: 312 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 371
+ L +DGW+NTGD+G I ++ C L + GR+K+T+VL GENVEP+ +E
Sbjct: 478 KVL-KDGWMNTGDLGMITFNN-------C---LKIVGRSKETVVLLGGENVEPVPIENRL 526
Query: 372 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS-LLYGE 430
L S I Q +V+GQD++ AI+VP + L A +L+K + L+ E
Sbjct: 527 LESPFIAQCMVVGQDKKYLSAIVVP-------SVDHLKDYGASTEDLAKNAEVQRLIRDE 579
Query: 431 LRKWTS-----KCSFQIGPIHVVDEPFTV 454
++K S K +I + ++ +PF V
Sbjct: 580 VKKLISNEAGFKSFEKIVDVRILPKPFEV 608
>gi|390940643|ref|YP_006404380.1| AMP-forming long-chain acyl-CoA synthetase [Sulfurospirillum
barnesii SES-3]
gi|390193750|gb|AFL68805.1| AMP-forming long-chain acyl-CoA synthetase [Sulfurospirillum
barnesii SES-3]
Length = 629
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 146/444 (32%), Positives = 250/444 (56%), Gaps = 24/444 (5%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E + ++DI T +YTSGTTG PKGV L+H+N+++ +R + ++ ++ D ++S+LP WH++
Sbjct: 173 EALDAEDIVTIIYTSGTTGTPKGVPLSHENIMYNVREIPPLIALQSTDMWVSILPSWHIF 232
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ERA Y SRG +Y++++ DL++Y+P + +VP ++E++Y+ I + + A +
Sbjct: 233 ERAAEYVALSRGCCTVYSSIKTFAADLEQYKPTIVATVPRLWESMYTKINTTLEKTDAKK 292
Query: 140 RVVARALIRISFAYTAFKRIYEGF--CLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
+ + LI IS AY KR+ + C K+PS+ V + + A + C L+P + +
Sbjct: 293 AKIFKKLIAISIAYKRAKRVIDDELPCF----KKPSFFVTCKEKIVAYLTCFFLYPFYSI 348
Query: 198 AEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
A+K + + G + VSGGG+LP +D + +AIG+++ YG++E +PVI+ R
Sbjct: 349 AQKKLALVQEKFGGRLRLAVSGGGALPDFLDAWIDAIGIRIVNAYGMSECAPVISGRALQ 408
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
CN ++G P+ T +KIV E L AG G + V+G QVM GY+ NP ++ ED
Sbjct: 409 CNTFSTLGLPVKGTTLKIVTKE-GASLDAGEIGEIWVKGEQVMHGYYNNPEENAKSFSED 467
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
G+ TGD+G + G L++ GR+K+ IVL+ GENV+P +E I
Sbjct: 468 GFFKTGDLGKLT----------LKGELIITGRSKEIIVLANGENVDPSRIESTLSMLPFI 517
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEV--LMAAKRLSIVHADASELSKEKTISLLYGEL---- 431
+++G ++ GA+IVPD E++ +A +VH + + ++ L E+
Sbjct: 518 SDAILVGHTKKGLGALIVPDFEKLKEYVAVNFDKVVHTIEQVMEDQHIVAKLKSEMNAML 577
Query: 432 -RKWTSKCSFQIGPIHVVDEPFTV 454
+K K ++ IH +D+ FTV
Sbjct: 578 HQKEGFKPFEKLQNIHFLDQEFTV 601
>gi|434381721|ref|YP_006703504.1| AMP-dependent synthetase and ligase [Brachyspira pilosicoli WesB]
gi|404430370|emb|CCG56416.1| AMP-dependent synthetase and ligase [Brachyspira pilosicoli WesB]
Length = 628
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 164/450 (36%), Positives = 251/450 (55%), Gaps = 38/450 (8%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
K + +DD AT +YTSGTTG PKGV+LTH N+LH +R L DI+ + G+K L++LP WH
Sbjct: 174 KASKLNNDDTATIIYTSGTTGKPKGVILTHGNILHNVRVLPDIIKLQRGEKLLTVLPIWH 233
Query: 78 VYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
+YER Y G T R+LK+D +P ISVP ++ +Y+G+ K I A
Sbjct: 234 IYERTISYVTAIFGCFTAITNKRDLKNDFVEEKPDIFISVPAIWVNIYNGVMKNIDKKPA 293
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI--DWLWARIICAILWPL- 194
A +++ ++ I+ S Y RN + + +V L+ + ++ I + PL
Sbjct: 294 AVKMMVKSFIQGSIRY------------IRNLRYQNNMVYLLGDEKKESKKIEYDILPLD 341
Query: 195 ---HLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
H +A+KLVYKKI+ G + +SGGG+LPM+I+ F EA G+ + VG+G+TE++PV
Sbjct: 342 PMSHKMAQKLVYKKIKELTGGRLRLTISGGGALPMYIEDFIEATGINLVVGWGITETAPV 401
Query: 251 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSAT 310
+ R P N G+ G P+ +I++ D N + G G+ ++G + + Y+K+ T
Sbjct: 402 VTLRSPFKNYRGTCGAPVPEVQIEVRDKNGN-ICKDGELGVCYIKGPNIFKEYYKDKELT 460
Query: 311 KQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA 370
+QA +DG+ N+GD+G G +VL GRAK+TIVL TGENVEP +E
Sbjct: 461 RQA-KKDGFFNSGDLGAYTKQ----------GEIVLTGRAKETIVLLTGENVEPQPIENK 509
Query: 371 ALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK-TISLLYG 429
A+ S I QI+++GQD+ GAI+V DK+ V + I H D + + K + L+
Sbjct: 510 AMESKYISQIMLVGQDKASTGAIVVIDKDNVKEFLDKHKI-HYDENNMENSKDVVKLIKH 568
Query: 430 EL-RKWTSKCSFQ----IGPIHVVDEPFTV 454
EL R SK F+ I + + + FT+
Sbjct: 569 ELSRLVNSKNGFRPYETISKLIITSKDFTI 598
>gi|300871650|ref|YP_003786523.1| AMP-dependent synthetase and ligase [Brachyspira pilosicoli
95/1000]
gi|300689351|gb|ADK32022.1| AMP-dependent synthetase and ligase [Brachyspira pilosicoli
95/1000]
Length = 628
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 164/450 (36%), Positives = 251/450 (55%), Gaps = 38/450 (8%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
K + +DD AT +YTSGTTG PKGV+LTH N+LH +R L DI+ + G+K L++LP WH
Sbjct: 174 KASKLNNDDTATIIYTSGTTGKPKGVILTHGNILHNVRVLPDIIKLQRGEKLLTVLPIWH 233
Query: 78 VYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
+YER Y G T R+LK+D +P ISVP ++ +Y+G+ K I A
Sbjct: 234 IYERTISYVTAIFGCFTAITNKRDLKNDFVEEKPDIFISVPAIWVNIYNGVMKNIDKKPA 293
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI--DWLWARIICAILWPL- 194
A +++ ++ I+ S Y RN + + +V L+ + ++ I + PL
Sbjct: 294 AVKMMVKSFIQGSVRY------------IRNLRYQNNMVYLLGDEKKESKKIEYDILPLD 341
Query: 195 ---HLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
H +A+KLVYKKI+ G + +SGGG+LPM+I+ F EA G+ + VG+G+TE++PV
Sbjct: 342 PMSHKMAQKLVYKKIKELTGGRLRLTISGGGALPMYIEDFIEATGINLVVGWGITETAPV 401
Query: 251 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSAT 310
+ R P N G+ G P+ +I++ D N + G G+ ++G + + Y+K+ T
Sbjct: 402 VTLRSPFKNYRGTCGAPVPEVQIEVRDKNGN-ICKDGELGVCYIKGPNIFKEYYKDKELT 460
Query: 311 KQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA 370
+QA +DG+ N+GD+G G +VL GRAK+TIVL TGENVEP +E
Sbjct: 461 RQA-KKDGFFNSGDLGAYTKQ----------GEIVLTGRAKETIVLLTGENVEPQPIENK 509
Query: 371 ALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK-TISLLYG 429
A+ S I QI+++GQD+ GAI+V DK+ V + I H D + + K + L+
Sbjct: 510 AMESKYISQIMLVGQDKASTGAIVVIDKDNVKEFLDKHKI-HYDENNMENSKDVVKLIKH 568
Query: 430 EL-RKWTSKCSFQ----IGPIHVVDEPFTV 454
EL R SK F+ I + + + FT+
Sbjct: 569 ELSRLVNSKNGFRPYETISKLIITSKDFTI 598
>gi|431807605|ref|YP_007234503.1| AMP-dependent synthetase and ligase [Brachyspira pilosicoli
P43/6/78]
gi|430780964|gb|AGA66248.1| AMP-dependent synthetase and ligase [Brachyspira pilosicoli
P43/6/78]
Length = 623
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 164/450 (36%), Positives = 251/450 (55%), Gaps = 38/450 (8%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
K + +DD AT +YTSGTTG PKGV+LTH N+LH +R L DI+ + G+K L++LP WH
Sbjct: 169 KASKLNNDDTATIIYTSGTTGKPKGVILTHGNILHNVRVLPDIIKLQRGEKLLTVLPIWH 228
Query: 78 VYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
+YER Y G T R+LK+D +P ISVP ++ +Y+G+ K I A
Sbjct: 229 IYERTISYVTAIFGCFTAITNKRDLKNDFVEEKPDIFISVPAIWVNIYNGVMKNIDKKPA 288
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI--DWLWARIICAILWPL- 194
A +++ ++ I+ S Y RN + + +V L+ + ++ I + PL
Sbjct: 289 AVKMMVKSFIQGSVRY------------IRNLRYQNNMVYLLGDEKKESKKIEYDILPLD 336
Query: 195 ---HLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
H +A+KLVYKKI+ G + +SGGG+LPM+I+ F EA G+ + VG+G+TE++PV
Sbjct: 337 PMSHKMAQKLVYKKIKELTGGRLRLTISGGGALPMYIEDFIEATGINLVVGWGITETAPV 396
Query: 251 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSAT 310
+ R P N G+ G P+ +I++ D N + G G+ ++G + + Y+K+ T
Sbjct: 397 VTLRSPFKNYRGTCGAPVPEVQIEVRDKNGN-ICKDGELGVCYIKGPNIFKEYYKDKELT 455
Query: 311 KQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA 370
+QA +DG+ N+GD+G G +VL GRAK+TIVL TGENVEP +E
Sbjct: 456 RQA-KKDGFFNSGDLGAYTKQ----------GEIVLTGRAKETIVLLTGENVEPQPIENK 504
Query: 371 ALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK-TISLLYG 429
A+ S I QI+++GQD+ GAI+V DK+ V + I H D + + K + L+
Sbjct: 505 AMESKYISQIMLVGQDKASTGAIVVIDKDNVKEFLDKHKI-HYDENNMENSKDVVKLIKH 563
Query: 430 EL-RKWTSKCSFQ----IGPIHVVDEPFTV 454
EL R SK F+ I + + + FT+
Sbjct: 564 ELSRLVNSKNGFRPYETISKLIITSKDFTI 593
>gi|219119029|ref|XP_002180281.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408538|gb|EEC48472.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 633
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 159/453 (35%), Positives = 259/453 (57%), Gaps = 44/453 (9%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI------RSLYDIVPAENGDKFLSMLPP 75
+G DD+AT VYTSGTTG PKGVMLTH NL+HQI + YD + LS+LP
Sbjct: 179 LGRDDLATIVYTSGTTGRPKGVMLTHGNLIHQIGHRVGTETRYDESEPLPDETMLSLLPV 238
Query: 76 WHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 135
WH+ ER+ ++ +RG ++Y+++R K+DL +++P + + VP V E + +G+Q + +
Sbjct: 239 WHITERSFELWMLARGCNVVYSSIRTFKNDLAKHRPEWAVLVPRVLEKIATGVQDKFSSG 298
Query: 136 SAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLH 195
S +++++ S A ++I +G+ + +QP ++ L ++ + L PL+
Sbjct: 299 SLPVKLLSKLFTSTSKAAAKHRKITQGYVVG---EQPP---GAMEKLASKALLVALSPLN 352
Query: 196 LLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
+ K+V+ K+Q+ G + +SGG +L ++ FYEA G+ + V YGLTE +P+I+ R
Sbjct: 353 AVGNKIVWSKVQNGFGGRMRTIMSGGSALSGSLEEFYEAAGLTIIVAYGLTECAPLISHR 412
Query: 255 RPTCNVL--GSVGHPINHTEIKIVDAETNE------VLPAGSKGIVKVRGSQVMQGYFKN 306
R N++ G VG TE+++V E+ LPAG G+V RG Q+M+GY+K+
Sbjct: 413 RRDANLVTGGCVGTACIDTELRVVSPESKASTTPRPALPAGEVGVVIARGPQIMKGYYKD 472
Query: 307 PSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLE 366
+ TK+A+D+ G+ +TGD+G + P G L+L GRAKDTIVLS GENVEP
Sbjct: 473 VAETKKAIDQFGFFDTGDLGRVNP---------ATGDLILTGRAKDTIVLSNGENVEPGP 523
Query: 367 LEEAALRS-SLIRQIVVIGQDQRRPGAIIVPDKEEV----LMAAKRLSIVHADASELSKE 421
LE+A L SLI Q+++ GQD R+ AI+V E+ ++ +++ +++
Sbjct: 524 LEDAILGELSLIEQVMLTGQDGRKLTAIVVLSPSELANEGFLSKDEGALMQKRNEQVNDP 583
Query: 422 KTISLLYGELRKWTSKCSFQIGPIHVVDEPFTV 454
K+ +KW Q+ ++V EPF +
Sbjct: 584 KSTK----RFQKWE-----QVKDVYVTLEPFAM 607
>gi|404476437|ref|YP_006707868.1| AMP-dependent synthetase and ligase [Brachyspira pilosicoli B2904]
gi|404437926|gb|AFR71120.1| AMP-dependent synthetase and ligase [Brachyspira pilosicoli B2904]
Length = 628
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 164/450 (36%), Positives = 250/450 (55%), Gaps = 38/450 (8%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
K + +DD AT +YTSGTTG PKGV+LTH N+LH +R L DI+ + G+K L++LP WH
Sbjct: 174 KASKLNNDDTATIIYTSGTTGKPKGVILTHGNILHNVRVLPDIIKLQRGEKLLTVLPIWH 233
Query: 78 VYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
+YER Y G T R+LK+D +P ISVP ++ +Y+G+ K I A
Sbjct: 234 IYERTISYVTAIFGCFTAITNKRDLKNDFVEEKPDIFISVPAIWVNIYNGVMKNIDKKPA 293
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI--DWLWARIICAILWPL- 194
A +++ ++ I+ S Y RN + + +V L+ + ++ I + PL
Sbjct: 294 AVKMMVKSFIQGSIRY------------IRNLRYQNNMVYLLGDEKKESKKIEYDILPLD 341
Query: 195 ---HLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
H +A+KLVYKKI+ G + +SGGG+LPM+I+ F EA G+ + VG+G+TE++PV
Sbjct: 342 PMSHKMAQKLVYKKIKELTGGRLRLTISGGGALPMYIEDFIEATGINLVVGWGITETAPV 401
Query: 251 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSAT 310
+ R P N G+ G P+ +I++ D N + G G+ ++G + + Y+K+ T
Sbjct: 402 VTLRSPFKNYRGTCGAPVPEVQIEVRDKNGN-ICKDGELGVCYIKGPNIFKEYYKDKELT 460
Query: 311 KQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA 370
+QA +DG N+GD+G G +VL GRAK+TIVL TGENVEP +E
Sbjct: 461 RQA-KKDGLFNSGDLGAYTKQ----------GEIVLTGRAKETIVLLTGENVEPQPIENK 509
Query: 371 ALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK-TISLLYG 429
A+ S I QI+++GQD+ GAI+V DK+ V + I H D + + K + L+
Sbjct: 510 AMESKYISQIMLVGQDKASTGAIVVIDKDNVKEFLDKHKI-HYDENNMENSKDVVKLIKH 568
Query: 430 EL-RKWTSKCSFQ----IGPIHVVDEPFTV 454
EL R SK F+ I + + + FT+
Sbjct: 569 ELSRLVNSKNGFRPYETISKLIITSKDFTI 598
>gi|445061913|ref|ZP_21374382.1| long-chain acyl-CoA synthetase [Brachyspira hampsonii 30599]
gi|444506705|gb|ELV06998.1| long-chain acyl-CoA synthetase [Brachyspira hampsonii 30599]
Length = 625
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 164/448 (36%), Positives = 240/448 (53%), Gaps = 34/448 (7%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
K + ++ AT +YTSGTTG PKGV+LTH N+LH IR L DI+ + G+K L++LP WH
Sbjct: 169 KASKLTNESTATIIYTSGTTGKPKGVILTHGNILHNIRVLPDIIKLQPGEKLLTILPIWH 228
Query: 78 VYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
+YER Y G T R LK+D +P ISVP ++ +Y+ + K I
Sbjct: 229 IYERTISYVTAITGCFTAITNKRYLKNDFTEEKPDIFISVPAIWVNIYNTVMKNIDRKGT 288
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLT-----RNQKQPSYLVALIDWLWARIICAILW 192
R +A+ I+ S Y R ++ K+ Y + + D L+
Sbjct: 289 IARNLAKFFIKRSLKYIRSLRFQNDLVYLLGDEYKSHKKSEYSIGIFDPLY--------- 339
Query: 193 PLHLLAEKLVYKKI-QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
H +A+K+VY KI + G + +SGGG+LPM+I+ F EA+G+ + VG+G+TE+SPV+
Sbjct: 340 --HKMAKKMVYSKILELTGGKMRLTISGGGALPMYIEDFVEAVGINLVVGWGITETSPVV 397
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 311
R P N G+ G PI +I+I D E N + G G+ ++G + + Y+K+P TK
Sbjct: 398 TLRSPYKNYRGTCGAPIPEVKIEIRDKEGN-ICKDGVMGVCYIKGPNIFKEYYKDPELTK 456
Query: 312 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 371
QA DG+ N+GD+G G +VL GRAK+TIVL TGENVEP +E A
Sbjct: 457 QA-KVDGFFNSGDLGAYTQQ----------GEIVLTGRAKETIVLLTGENVEPQPIENKA 505
Query: 372 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGEL 431
L S I QI++IGQD+ GAIIV +KE + + I + + + S L+ EL
Sbjct: 506 LESPYIHQIMLIGQDKASTGAIIVINKENIKEYFDKHKISYDENTLSSSRDVYKLIREEL 565
Query: 432 RKWTS-KCSFQ----IGPIHVVDEPFTV 454
+ K F+ I + + DE FT+
Sbjct: 566 DNLINYKNGFRPYEAIAKMIITDEEFTI 593
>gi|456864747|gb|EMF83139.1| AMP-binding enzyme [Leptospira weilii serovar Topaz str. LT2116]
Length = 683
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 181/495 (36%), Positives = 251/495 (50%), Gaps = 74/495 (14%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-----ENGDKFLSMLP 74
E I +D+ T +YTSGTTG PKGVMLTH N++HQ + +VP + D LS+LP
Sbjct: 173 EDIKPEDLFTLIYTSGTTGMPKGVMLTHSNMVHQ---MVHVVPMLLTDIKTTDSMLSILP 229
Query: 75 PWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 134
WH++ER Y SRGI+ YT V +LK+DL + +P +M S P V+E +Y+ I ++
Sbjct: 230 IWHIFERVNEYGAISRGIQTYYTKVSDLKNDLTKAKPSFMGSAPRVWENVYTNIYNKVND 289
Query: 135 SSAA---RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ-------------------- 171
R+ + + S Y A +R G + +
Sbjct: 290 PKQTPPLRKFLFKLAYFFSKHYNASRRFLSGLEVDYENRNILKSIAIGTKSLIVLLLTGP 349
Query: 172 --------------PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAG 216
P+Y + L W + I L + +V KI++A G KA
Sbjct: 350 FTLSAMTILAYLALPTYGIRLPSWFFLMIAGLGLIFNAKTLDAVVLSKIRAATGGRLKAS 409
Query: 217 VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIV 276
+SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I
Sbjct: 410 LSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFAKPIIGSVGFLVPKSELMIK 469
Query: 277 DAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 325
D N EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTGDI
Sbjct: 470 DENGNVLTHINDKFEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTGDI 528
Query: 326 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 385
G+I L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQ
Sbjct: 529 GFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQ 578
Query: 386 DQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF--- 440
D++ GAIIVPD E + + K I + EL K K I E+R + S K F
Sbjct: 579 DKKVLGAIIVPDMEHLTLWCKENGIDSSKIDELIKNPKVIEFYKKEVRNYNSTKTGFKSF 638
Query: 441 -QIGPIHVVDEPFTV 454
Q+ I + +PF V
Sbjct: 639 EQVQHIILTKKPFEV 653
>gi|339498933|ref|YP_004696968.1| Long-chain-fatty-acid--CoA ligase [Spirochaeta caldaria DSM 7334]
gi|338833282|gb|AEJ18460.1| Long-chain-fatty-acid--CoA ligase [Spirochaeta caldaria DSM 7334]
Length = 637
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 154/408 (37%), Positives = 229/408 (56%), Gaps = 23/408 (5%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+AT ++TSGTTG PKGVML+H N LHQ+ SL I + GD +LS+LP WH +ER
Sbjct: 187 DDLATIIFTSGTTGEPKGVMLSHGNFLHQLPSLPLIADLKPGDVWLSVLPVWHSFERIMQ 246
Query: 85 YF--IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y + GI + D + +P +M SVP ++E++ GI + I ++++
Sbjct: 247 YVAPCYYNGIAYSKPVGSIMLADFKAVRPQWMASVPRIWESVRDGIYRNIRQHGGIKKIL 306
Query: 143 ARALIRISFAYTAFKRIYEGFC--LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+ + A+ + + G R + ++ I W+ +L PL L
Sbjct: 307 FTFFVSVGTAHAYMRNMTLGLLPNFHRRMRALDTVLGCIPWM-------LLTPLKALGNV 359
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LV+ K+++ +G KAG+SGGG+LP +D F+ A+G+ + GYGLTE++PVIA RR
Sbjct: 360 LVFNKLKALLGGRFKAGISGGGALPSQVDKFFSAVGITLLEGYGLTETAPVIACRRMNNA 419
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
G VG I +TE+KIVD + N LP G +G++ VRG QVM+GY+K P T + L DGW
Sbjct: 420 RPGCVGQIILNTEVKIVDEKGNS-LPPGHQGLIMVRGGQVMKGYYKKPDLTAKVLAPDGW 478
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
NTGD+G + + + + GRAKDTIVL GENVEP +E S I Q
Sbjct: 479 FNTGDLGMLTYDNE----------IKITGRAKDTIVLRGGENVEPAPIEAKINESEWISQ 528
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLL 427
+V+GQDQ+ A+IVP ++ ++ A+ +I D L ++ I+ L
Sbjct: 529 CMVVGQDQKYLAALIVPKQDALMAFAQENNIPIVDYETLLQQPEINEL 576
>gi|343127895|ref|YP_004777826.1| AMP-binding protein [Borrelia bissettii DN127]
gi|342222583|gb|AEL18761.1| AMP-binding enzyme family protein [Borrelia bissettii DN127]
Length = 645
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 161/441 (36%), Positives = 256/441 (58%), Gaps = 24/441 (5%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERA 82
S DIAT +YTSGTTG PKGVML H++ + Q+ LYD +P + G +S+LP WH +ERA
Sbjct: 182 SKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRLYDYLPTLKPGKIMISILPLWHSFERA 241
Query: 83 CGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
C Y + +GI + Y+ L D P +ISVP ++E + GI K++ + S ++
Sbjct: 242 CEYIVALKGIAIAYSKPIGPVLLKDFLLLNPQMIISVPRIWEGIRIGIIKKV-SESFIKK 300
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+V ++I Y K + G L+ K+ S ++L L+ + +++P+ LL +
Sbjct: 301 LVFGGFLKIGIVYAKLKERFLG--LSPIYKKTSLFISLFSKLFIFVGIVLIFPIKLLGDI 358
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LV+KKI++A+G + + GVSGGG+L ++D F++A+G+KV GYGLTE+ P+++ RR
Sbjct: 359 LVFKKIKNALGQNFEFGVSGGGALVDYVDYFFKAVGIKVLEGYGLTETGPILSVRRLKGP 418
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
V +VG + E K+V + N VLP G KG + VR Q+M GYFK+ + T + L EDGW
Sbjct: 419 VAKTVGPILPDVEYKVVGFDGN-VLPYGEKGELWVRSPQIMNGYFKDKAKTNEVLTEDGW 477
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
NTGD+ + ++ + + GR+KDTIVL GEN+EP LE +S I
Sbjct: 478 FNTGDLVRLTINNE----------ISIVGRSKDTIVLRGGENIEPEPLERVLGKSLFIEN 527
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT--SK 437
I+++GQDQ+ GA+IVP+ + + A + + S+L + ++ LY + T +K
Sbjct: 528 IMIVGQDQKFLGAVIVPNFDNLEKWANSSGVSFSSRSDLLANEDVNKLYSKHISDTINTK 587
Query: 438 CSF----QIGPIHVVDEPFTV 454
F +I ++ +PF++
Sbjct: 588 VGFKNFEKIAGFVLLQDPFSI 608
>gi|359689644|ref|ZP_09259645.1| long-chain-fatty-acid CoA ligase [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418749983|ref|ZP_13306271.1| AMP-binding enzyme domain protein [Leptospira licerasiae str.
MMD4847]
gi|418759344|ref|ZP_13315524.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|384113835|gb|EIE00100.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|404274868|gb|EJZ42186.1| AMP-binding enzyme domain protein [Leptospira licerasiae str.
MMD4847]
Length = 679
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 176/496 (35%), Positives = 260/496 (52%), Gaps = 82/496 (16%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I +D+ T +YTSGTTG PKGV L H N++HQ+ ++ ++ K LS+LP WHV+ER
Sbjct: 173 IKPEDLFTLIYTSGTTGLPKGVQLRHSNMMHQVLNVTPMLKINAEAKLLSILPVWHVFER 232
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y S G YT VR+L+ DL +P +M S P ++E +Y+GI +I S
Sbjct: 233 VVEYVCISIGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRINDPSQTP-A 291
Query: 142 VARALIRISFAYTAFKRI-----------YEG----------------------FCLTRN 168
+ R L ++++ ++ K Y G F LT
Sbjct: 292 IRRGLFKLAYFFSDKKNAAVRFITGKEVDYHGRNPIFSFFYGILMLFQLVLTGPFTLTVI 351
Query: 169 QKQPSYLVALIDWLWARIICAILWPLHLLA-----------EKLVYKKIQSAIGIS-KAG 216
+YL+A ++ ++ PL+++A +K+V KI++A G +A
Sbjct: 352 SSIAAYLLASTEF------SSLSLPLYIIAGLGVFFNSATLDKIVLSKIRTATGGRLRAS 405
Query: 217 VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIV 276
+SGGG+LP H+D F+ IG+ V GYG+TE+SPV++ R ++GSVG + T ++I
Sbjct: 406 ISGGGALPRHVDEFFNNIGINVLEGYGMTETSPVLSVRTFQKLIIGSVGSIVPKTNLQIR 465
Query: 277 DAETNEVLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 324
+ + NEVL G KG+V V+G QVM+GYFKN AT +AL DGW+NTGD
Sbjct: 466 N-DNNEVLTEVDENGKVIKGRLGRKGVVFVKGPQVMKGYFKNDEATSKAL-VDGWMNTGD 523
Query: 325 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 384
+G I H+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIG
Sbjct: 524 MGMINFKHT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIG 573
Query: 385 QDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL-SKEKTISLLYGELRKW-TSKCSF-- 440
QDQ+ GAII+PD +++ AK + ++ L K + L E++ SK F
Sbjct: 574 QDQKNLGAIIIPDFDKLEEWAKENGVDTSNKDALIENPKVVDLYRKEIKALNNSKNGFKS 633
Query: 441 --QIGPIHVVDEPFTV 454
Q+ P +V +PF V
Sbjct: 634 FEQVNPFFLVSKPFEV 649
>gi|429124895|ref|ZP_19185427.1| Long-chain acyl-CoA synthetases (AMP-forming) [Brachyspira
hampsonii 30446]
gi|426279278|gb|EKV56304.1| Long-chain acyl-CoA synthetases (AMP-forming) [Brachyspira
hampsonii 30446]
Length = 625
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 163/448 (36%), Positives = 241/448 (53%), Gaps = 34/448 (7%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
K + ++ AT +YTSGTTG PKGV+LTH N+LH IR L DI+ + G+K L++LP WH
Sbjct: 169 KASKLTNESTATIIYTSGTTGKPKGVILTHGNILHNIRVLPDIIKLQPGEKLLTILPIWH 228
Query: 78 VYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
+YER Y G T R LK+D +P ISVP ++ +Y+ + K I
Sbjct: 229 IYERTISYVTAITGCFTAITNKRYLKNDFTEEKPDIFISVPAIWVNIYNTVMKNIDRKGT 288
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCL-----TRNQKQPSYLVALIDWLWARIICAILW 192
R +A+ I+ S Y R ++ K+ Y + + D ++
Sbjct: 289 IARNLAKFFIKRSLKYIRSLRFQNDLVYLLGEESKAHKKSEYSIGMFDPIY--------- 339
Query: 193 PLHLLAEKLVYKKI-QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
H +A+K+VY KI + G + +SGGG+LPM+I+ F EA+G+ + VG+G+TE+SPV+
Sbjct: 340 --HKMAKKMVYSKILELTGGKMRLTISGGGALPMYIEDFVEAVGINLVVGWGITETSPVV 397
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 311
R P N G+ G PI +I+I D E N + G G+ ++G + + Y+K+P TK
Sbjct: 398 TLRSPYKNYRGTCGAPIPEVKIEIRDKEGN-ICKDGVMGVCYIKGPNIFKEYYKDPELTK 456
Query: 312 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 371
QA DG+ N+GD+G G +VL GRAK+TIVL TGENVEP +E A
Sbjct: 457 QA-KVDGFFNSGDLGAYTQQ----------GEIVLTGRAKETIVLLTGENVEPQPIENKA 505
Query: 372 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGEL 431
L S I QI++IGQD+ GAIIV +KE + + I + + + S + L+ EL
Sbjct: 506 LESPYIYQIMLIGQDKASTGAIIVINKENIKEYFDKHKISYDENTLSSSKDVYKLIREEL 565
Query: 432 RKWTS-KCSFQ----IGPIHVVDEPFTV 454
+ K F+ I + + DE FT+
Sbjct: 566 DNLINYKNGFRPYEAIAKMIITDEEFTI 593
>gi|410938814|ref|ZP_11370654.1| AMP-binding enzyme [Leptospira noguchii str. 2006001870]
gi|410786015|gb|EKR74966.1| AMP-binding enzyme [Leptospira noguchii str. 2006001870]
Length = 683
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 182/497 (36%), Positives = 252/497 (50%), Gaps = 74/497 (14%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS-----LYDIVPAENGDKFLSM 72
+ E I +D+ T +YTSGTTG PKGVML H N++HQ+ L DI P D LS+
Sbjct: 171 RIEDIKPEDLFTLIYTSGTTGMPKGVMLMHSNMIHQMVHVVPMLLTDIKPT---DSMLSI 227
Query: 73 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
LP WH++ER Y S GI+ YT V +L++DL + +P +M S P V+E +Y+ I ++
Sbjct: 228 LPIWHIFERVNEYGAISSGIQTYYTKVADLRNDLAKAKPSFMASAPRVWENVYANIYNKV 287
Query: 133 FTSSAA---RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ------------------ 171
RR++ + S Y A +R G + ++
Sbjct: 288 NDPKQTPPIRRILFKLAYFFSKHYNASRRFLNGLEVDYEKRNILKSLAIGIKSLIILLLT 347
Query: 172 ----------------PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-K 214
P Y V L +WL+ + L + +V KI+ A G K
Sbjct: 348 GPFTLSAISILAYLTLPVYRVHLPNWLFFSLAGLGLVFNAKTLDTIVLSKIRGATGGRLK 407
Query: 215 AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 274
A +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+
Sbjct: 408 ASLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELI 467
Query: 275 IVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
I D N EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTG
Sbjct: 468 IKDENGNVLTHINDQFEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTII-DGWMNTG 526
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
DIG+I L L GRAKDT+VL GENVEP+ +E S I+Q +VI
Sbjct: 527 DIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVI 576
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF- 440
GQDQ+ GAIIVPD E + + K I + E+ K K I E+R + S K F
Sbjct: 577 GQDQKVLGAIIVPDIEHLAVWCKENGIDSSKIDEIIKNPKVIDFYKKEVRNYNSTKTGFK 636
Query: 441 ---QIGPIHVVDEPFTV 454
Q+ I + +PF V
Sbjct: 637 SFEQVQHIILAKKPFEV 653
>gi|296125112|ref|YP_003632364.1| AMP-dependent synthetase/ligase [Brachyspira murdochii DSM 12563]
gi|296016928|gb|ADG70165.1| AMP-dependent synthetase and ligase [Brachyspira murdochii DSM
12563]
Length = 625
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 160/444 (36%), Positives = 242/444 (54%), Gaps = 34/444 (7%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+ ++ IAT +YTSGTTG PKGV+LTH N+LH +R L DI+ + G+K L++LP WH+YER
Sbjct: 173 LTNESIATIIYTSGTTGKPKGVILTHGNILHNVRVLPDIIKLKAGEKLLTILPIWHIYER 232
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y G T R LK+D +P ISVP ++ +Y+ + K I +A +
Sbjct: 233 TISYVTAIIGCFTAITNKRYLKNDFTEEKPDIFISVPAIWVNIYNTVMKNIDRKNAFLKK 292
Query: 142 VARALIRISFAYTAFKRIYEGFCL-----TRNQKQPSYLVALIDWLWARIICAILWPLHL 196
+ +I+ S +Y R R K+ Y + + D L+ H
Sbjct: 293 FIKFIIKRSISYIRSVRYQNDLVYLIGDEKREDKKAEYSIGMFDPLF-----------HK 341
Query: 197 LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
+A+K+VY KI G + +SGGG+LPM+I+ F EA+G+ + VG+G+TE+SPV+ R
Sbjct: 342 MAKKMVYSKIMELTGGKIRLTISGGGALPMYIEDFVEAVGINLVVGWGITETSPVVTLRS 401
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
P N G+ G PI +I+I D + N G G+ ++G + + Y+K+P T QA
Sbjct: 402 PYKNYRGTCGAPIPEVKIEIRDKDGNSC-KDGVMGVCWIKGPNIFKEYYKDPELTAQA-K 459
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
DG+ N+GD+G G +VL GRAK+TIVL TGENVEP +E A+ SS
Sbjct: 460 IDGFFNSGDLGTYTQE----------GEIVLTGRAKETIVLLTGENVEPQPIENKAMESS 509
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT 435
I QI+++GQD+ GAI+V +KE + + I + + + S ++ L+ EL +
Sbjct: 510 YISQIMLVGQDKASTGAIVVINKENIKYYFDKEKIAYDEKNLASSKEVYKLIREELDRLI 569
Query: 436 S-KCSFQ----IGPIHVVDEPFTV 454
+ K F+ I I + DE FT+
Sbjct: 570 NYKNGFRPYEAIAKIIITDEEFTI 593
>gi|359684409|ref|ZP_09254410.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai str.
2000030832]
gi|421112436|ref|ZP_15572893.1| AMP-binding enzyme [Leptospira santarosai str. JET]
gi|410802081|gb|EKS08242.1| AMP-binding enzyme [Leptospira santarosai str. JET]
gi|456875451|gb|EMF90652.1| AMP-binding enzyme [Leptospira santarosai str. ST188]
Length = 683
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 179/497 (36%), Positives = 256/497 (51%), Gaps = 74/497 (14%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP-----AENGDKFLSM 72
+ E I +D+ T +YTSGTTG PKGVML H N++HQ + +VP + D LS+
Sbjct: 171 RIEDIKPEDLFTLIYTSGTTGMPKGVMLMHSNMVHQ---MVHVVPMLLTNTKPTDSMLSI 227
Query: 73 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
LP WH++ER Y SRGI+ YT V +LK+DL + +P +M S P V+E +Y+ I ++
Sbjct: 228 LPIWHIFERVNEYGAISRGIQTYYTKVTDLKNDLTKAKPSFMGSAPRVWENVYTNIYNKV 287
Query: 133 FTSSAA---RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ---------PSYLVALID 180
R+ + + S Y A +R G + + S +V L+
Sbjct: 288 NDPKQTPPLRKFLFKLAYFFSKHYNASRRFLNGLEVDYENRNILKSVAIGTKSLIVLLLT 347
Query: 181 WLWARIICAIL--------------WPLHLLA-----------EKLVYKKIQSAIGIS-K 214
+ AIL WP ++A + +V KI++A G K
Sbjct: 348 GPFTLSAMAILAYLTLPTYGVRLPGWPFLMIAGLGLIFNAKTLDAIVLSKIRAATGGRLK 407
Query: 215 AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 274
+SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+
Sbjct: 408 GSLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFAKPIIGSVGFLVPKSELM 467
Query: 275 IVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
I D N E+L G KG+V V+G QVM+GY+KNP TK+ + DGW+NTG
Sbjct: 468 IKDENGNVLTHINDKFEILAGKLGQKGVVFVKGPQVMKGYYKNPEVTKKTI-ADGWMNTG 526
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
DIG+I L L GRAKDT+VL GENVEP+ +E S I+Q +VI
Sbjct: 527 DIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVI 576
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF- 440
GQD++ GAIIVPD E++ + K I + +L K K I E+R + S K F
Sbjct: 577 GQDKKVLGAIIVPDMEQLTLWCKENEIDSSKIDDLIKNPKVIDFYKKEVRNYNSTKTGFK 636
Query: 441 ---QIGPIHVVDEPFTV 454
Q+ I + +PF V
Sbjct: 637 SFEQVQHIILAKKPFEV 653
>gi|418744637|ref|ZP_13300990.1| AMP-binding enzyme [Leptospira santarosai str. CBC379]
gi|418753073|ref|ZP_13309329.1| AMP-binding enzyme [Leptospira santarosai str. MOR084]
gi|409966756|gb|EKO34597.1| AMP-binding enzyme [Leptospira santarosai str. MOR084]
gi|410794519|gb|EKR92421.1| AMP-binding enzyme [Leptospira santarosai str. CBC379]
Length = 683
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 178/495 (35%), Positives = 252/495 (50%), Gaps = 74/495 (14%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP-----AENGDKFLSMLP 74
E I +D+ T +YTSGTTG PKGVML H N++HQ + +VP + D LS+LP
Sbjct: 173 EDIKPEDLFTLIYTSGTTGMPKGVMLMHSNMVHQ---MVHVVPMLLTNTKPTDSMLSILP 229
Query: 75 PWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 134
WH++ER Y SRGI+ YT V +LK+DL + +P +M S P V+E +Y+ I ++
Sbjct: 230 IWHIFERVNEYGAISRGIQTYYTKVTDLKNDLTKAKPSFMGSAPRVWENVYTNIYNKVND 289
Query: 135 SSAA---RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ-------------------- 171
R+ + + S Y A +R G + +
Sbjct: 290 PKQTPPLRKFLFKLAYFFSKHYNASRRFLNGLEVDYENRNILKSVAIGTKSLIVLLLTGP 349
Query: 172 --------------PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAG 216
P+Y V L +WL+ I L + +V KI++A G K
Sbjct: 350 FTLSAMAILAYLTLPTYGVRLPNWLFFTIAGLGLIFNAKTLDAIVLSKIRAATGGRLKGS 409
Query: 217 VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIV 276
+SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I
Sbjct: 410 LSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFAKPIIGSVGFLVPKSELMIK 469
Query: 277 DAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 325
D N E+L G KG+V V+G QVM+GY+KNP TK+ + DGW+NTGDI
Sbjct: 470 DENGNVLTHINDKFEILAGKLGQKGVVFVKGPQVMKGYYKNPEVTKKTI-ADGWMNTGDI 528
Query: 326 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 385
G+I L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQ
Sbjct: 529 GFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQ 578
Query: 386 DQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF--- 440
D++ GAIIVPD E++ + K I + +L K K I E+R + S K F
Sbjct: 579 DKKVLGAIIVPDMEQLTLWCKENEIDSSKIDDLIKNPKVIDFYKKEVRNYNSTKTGFKSF 638
Query: 441 -QIGPIHVVDEPFTV 454
Q+ I + +PF V
Sbjct: 639 EQVQHIILAKKPFEV 653
>gi|384208744|ref|YP_005594464.1| long-chain acyl-CoA synthetase [Brachyspira intermedia PWS/A]
gi|343386394|gb|AEM21884.1| Long-chain acyl-CoA synthetases (AMP-forming) [Brachyspira
intermedia PWS/A]
Length = 625
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 159/448 (35%), Positives = 242/448 (54%), Gaps = 34/448 (7%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
K + ++ AT +YTSGTTG PKGV+LTH N+LH +R L DI+ + G+K L++LP WH
Sbjct: 169 KASKLTNESTATIIYTSGTTGKPKGVILTHGNILHNVRVLPDIIKLQPGEKLLTILPIWH 228
Query: 78 VYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
+YER Y G T R LK+D +P ISVP ++ +Y+ + K I S
Sbjct: 229 IYERTISYVTAIIGCFTAITNKRYLKNDFTEERPDIFISVPAIWVNIYNTVMKNIDRKST 288
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLT-----RNQKQPSYLVALIDWLWARIICAILW 192
R +A+ LI+ S Y R ++ K+ Y + + D ++
Sbjct: 289 FARNLAKFLIKRSIKYIRSVRFQNDLVYLLGDEHKSDKKSEYSIGIFDPIY--------- 339
Query: 193 PLHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
H +A K+VY KI+ G + +SGGG+LPM+I+ F EA+G+ + VG+G+TE++PV+
Sbjct: 340 --HKMATKMVYSKIKELTGGKMRLTISGGGALPMYIEDFIEAVGINLVVGWGITETAPVV 397
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 311
R P N G+ G P+ +I++ D E N + G G+ ++G + + Y+K+P TK
Sbjct: 398 TLRSPFKNYRGTCGAPVPEVKIEVRDKEGN-ICKDGVMGVCYIKGPNIFKEYYKDPELTK 456
Query: 312 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 371
QA DG+ N+GD+G G +VL GRAK+TIVL TGENVEP +E A
Sbjct: 457 QA-KVDGFFNSGDLGTYTQQ----------GEIVLTGRAKETIVLLTGENVEPQPIENKA 505
Query: 372 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGEL 431
L S I QI+++GQD+ GAIIV +KE + + I + + + S + L+ EL
Sbjct: 506 LESPYISQIMLVGQDKASTGAIIVINKENIKEHFDKQKISYDEKTLASSKDVYKLMREEL 565
Query: 432 RKWTS-KCSFQ----IGPIHVVDEPFTV 454
+ + F+ I + + DE FT+
Sbjct: 566 DNLINYRNGFRPYEAIAKMIITDEEFTI 593
>gi|422005407|ref|ZP_16352593.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai serovar
Shermani str. LT 821]
gi|417255906|gb|EKT85355.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai serovar
Shermani str. LT 821]
Length = 683
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 178/495 (35%), Positives = 252/495 (50%), Gaps = 74/495 (14%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP-----AENGDKFLSMLP 74
E I +D+ T +YTSGTTG PKGVML H N++HQ + +VP + D LS+LP
Sbjct: 173 EDIKPEDLFTLIYTSGTTGMPKGVMLMHSNMVHQ---MVHVVPMLLTNTKPTDSMLSILP 229
Query: 75 PWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 134
WH++ER Y SRGI+ YT V +LK+DL + +P +M S P V+E +Y+ I ++
Sbjct: 230 IWHIFERVNEYGAISRGIQTYYTKVTDLKNDLTKAKPSFMGSAPRVWENVYTNIYNKVND 289
Query: 135 SSAA---RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ-------------------- 171
R+ + + S Y A +R G + +
Sbjct: 290 PKQTPPLRKFLFKLAYFFSKHYNASRRFLNGLEVDYENRNILKSVAIGTKSLIVLLLTGP 349
Query: 172 --------------PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAG 216
P+Y V L +WL+ I L + +V KI++A G K
Sbjct: 350 FTLSAMAILAYLTLPTYGVRLPNWLFFTIAGLGLIFNAKTLDAIVLSKIRAATGGRLKGS 409
Query: 217 VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIV 276
+SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I
Sbjct: 410 LSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFAKPIIGSVGFLVPKSELMIK 469
Query: 277 DAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 325
D N E+L G KG+V V+G QVM+GY+KNP TK+ + DGW+NTGDI
Sbjct: 470 DENGNVLTHINDKFEILAGKLGQKGVVFVKGPQVMKGYYKNPEVTKKTI-ADGWMNTGDI 528
Query: 326 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 385
G+I L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQ
Sbjct: 529 GFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQ 578
Query: 386 DQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF--- 440
D++ GAIIVPD E++ + K I + +L K K I E+R + S K F
Sbjct: 579 DKKVLGAIIVPDMEQLTLWCKENEIDSSKIDDLIKNPKVIDFYKKEVRNYNSTKTGFKSF 638
Query: 441 -QIGPIHVVDEPFTV 454
Q+ I + +PF V
Sbjct: 639 EQVQHIILAKKPFEV 653
>gi|216264227|ref|ZP_03436219.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 156a]
gi|215980700|gb|EEC21507.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 156a]
Length = 645
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 160/441 (36%), Positives = 256/441 (58%), Gaps = 24/441 (5%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERA 82
S DIAT +YTSGTTG PKGVML H++ + Q+ LYD +P + G +S+LP WH +ERA
Sbjct: 182 SKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRLYDYLPTLKPGKIMISILPLWHSFERA 241
Query: 83 CGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
C Y + +GI + Y+ L D P ++SVP ++E + GI K++ + S ++
Sbjct: 242 CEYIVALKGIAIAYSKPIGPVLLKDFLLLNPQMIVSVPRIWEGIRIGIIKKV-SESFIKK 300
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
V +++ Y K + G L+ K+ ++L++L L+ I +++P+ LL +
Sbjct: 301 FVFGGFLKVGIIYAKLKERFLG--LSPIYKKTNFLISLFSKLFLFIGIVLIFPIKLLGDI 358
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LV+KKI++A+G + + GVSGGG+L ++D F++A+G+KV GYGLTE+ P+++ RR
Sbjct: 359 LVFKKIKNALGQNFEFGVSGGGALVDYVDYFFKAVGIKVLEGYGLTETGPILSVRRLKGP 418
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
V +VG + E K+V + VLP G KG + VR Q+M GYFK+ + T + L EDGW
Sbjct: 419 VAKTVGPILPDVEYKVVGID-GRVLPYGEKGELWVRSPQIMSGYFKDKTKTSEVLTEDGW 477
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
NTGD+ + ++ + + GR+KDTIVL GEN+EP LE +S I
Sbjct: 478 FNTGDLVRLTINNE----------ISIVGRSKDTIVLRGGENIEPEPLERVLGKSLFIEN 527
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT--SK 437
I+++GQDQ+ GA+IVP+ + + A + + S+L + ++ LY + T +K
Sbjct: 528 IMIVGQDQKFLGAVIVPNFDNLEKWANSSGVSFSSRSDLLANEDVNKLYSKHISDTINTK 587
Query: 438 CSF----QIGPIHVVDEPFTV 454
F +I ++ +PFT+
Sbjct: 588 LGFKNFEKIVGFVLLQDPFTI 608
>gi|410448177|ref|ZP_11302263.1| AMP-binding enzyme [Leptospira sp. Fiocruz LV3954]
gi|410018076|gb|EKO80122.1| AMP-binding enzyme [Leptospira sp. Fiocruz LV3954]
Length = 683
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 179/497 (36%), Positives = 256/497 (51%), Gaps = 74/497 (14%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP-----AENGDKFLSM 72
+ E I +D+ T +YTSGTTG PKGVML H N++HQ + +VP + D LS+
Sbjct: 171 RIEDIKPEDLFTLIYTSGTTGMPKGVMLMHSNMVHQ---MVHVVPMLLTNTKPTDSMLSI 227
Query: 73 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
LP WH++ER Y SRGI+ YT V +LK+DL + +P +M S P V+E +Y+ I ++
Sbjct: 228 LPIWHIFERVNEYGAISRGIQTYYTKVTDLKNDLTKAKPSFMGSAPRVWENVYTNIYNKV 287
Query: 133 FTSSAA---RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ---------PSYLVALID 180
R+ + + S Y A +R G + + S +V L+
Sbjct: 288 NDPKQTPPLRKFLFKLAYFFSKHYNASRRFLNGLEVDYENRNILKSVAIGTKSLIVLLLT 347
Query: 181 WLWARIICAIL--------------WPLHLLA-----------EKLVYKKIQSAIGIS-K 214
+ AIL WP ++A + +V KI++A G K
Sbjct: 348 GPFTLSAMAILAYLTLPTYGVRFPGWPFLIIAGLGLIFNAKTLDAIVLSKIRAATGGRLK 407
Query: 215 AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 274
+SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+
Sbjct: 408 GSLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFAKPIIGSVGFLVPKSELM 467
Query: 275 IVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
I D N E+L G KG+V V+G QVM+GY+KNP TK+ + DGW+NTG
Sbjct: 468 IKDENGNVLTHINDKFEILAGKLGQKGVVFVKGPQVMKGYYKNPEVTKKTI-ADGWMNTG 526
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
DIG+I L L GRAKDT+VL GENVEP+ +E S I+Q +VI
Sbjct: 527 DIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVI 576
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF- 440
GQD++ GAIIVPD E++ + K I + +L K K I E+R + S K F
Sbjct: 577 GQDKKVLGAIIVPDMEQLTLWCKENEIDSSKIDDLIKNPKVIDFYKKEVRNYNSTKTGFK 636
Query: 441 ---QIGPIHVVDEPFTV 454
Q+ I + +PF V
Sbjct: 637 SFEQVQHIILAKKPFEV 653
>gi|224532749|ref|ZP_03673366.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi WI91-23]
gi|224512367|gb|EEF82751.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi WI91-23]
Length = 645
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 160/441 (36%), Positives = 256/441 (58%), Gaps = 24/441 (5%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERA 82
S DIAT +YTSGTTG PKGVML H++ + Q+ LYD +P + G +S+LP WH +ERA
Sbjct: 182 SKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRLYDYLPTLKPGKIMISILPLWHSFERA 241
Query: 83 CGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
C Y + +GI + Y+ L D P ++SVP ++E + GI K++ + S ++
Sbjct: 242 CEYIVALKGIAIAYSKPIGPVLLKDFLLLNPQMIVSVPRIWEGIRIGIIKKV-SESFIKK 300
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
V +++ Y K + G L+ K+ ++L++L L+ I +++P+ LL +
Sbjct: 301 FVFGGFLKVGIIYAKLKERFLG--LSPIYKKTNFLISLFSKLFLFIGIVLIFPIKLLGDI 358
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LV+KKI++A+G + + GVSGGG+L ++D F++A+G+KV GYGLTE+ P+++ RR
Sbjct: 359 LVFKKIKNALGQNFEFGVSGGGALVDYVDYFFKAVGIKVLEGYGLTETGPILSVRRLKGP 418
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
V +VG + E K+V + VLP G KG + VR Q+M GYFK+ + T + L EDGW
Sbjct: 419 VAKTVGPILPDVEYKVVGID-GRVLPYGEKGELWVRSPQIMSGYFKDKAKTSEVLTEDGW 477
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
NTGD+ + ++ + + GR+KDTIVL GEN+EP LE +S I
Sbjct: 478 FNTGDLVRLTINNE----------ISIVGRSKDTIVLRGGENIEPEPLERVLGKSLFIEN 527
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT--SK 437
I+++GQDQ+ GA+IVP+ + + A + + S+L + ++ LY + T +K
Sbjct: 528 IMIVGQDQKFLGAVIVPNFDNLEKWANSSGVSFSSISDLLANEDVNKLYSKHISDTINTK 587
Query: 438 CSF----QIGPIHVVDEPFTV 454
F +I ++ +PFT+
Sbjct: 588 LGFKNFEKIVGFVLLQDPFTI 608
>gi|15594938|ref|NP_212727.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi B31]
gi|195941726|ref|ZP_03087108.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 80a]
gi|223888827|ref|ZP_03623418.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 64b]
gi|225549652|ref|ZP_03770618.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 118a]
gi|387826230|ref|YP_005805683.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi JD1]
gi|2688524|gb|AAC66957.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi B31]
gi|223885643|gb|EEF56742.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 64b]
gi|225369929|gb|EEG99376.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 118a]
gi|312147979|gb|ADQ30638.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi JD1]
Length = 645
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 160/441 (36%), Positives = 256/441 (58%), Gaps = 24/441 (5%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERA 82
S DIAT +YTSGTTG PKGVML H++ + Q+ LYD +P + G +S+LP WH +ERA
Sbjct: 182 SKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRLYDYLPTLKPGKIMISILPLWHSFERA 241
Query: 83 CGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
C Y + +GI + Y+ L D P ++SVP ++E + GI K++ + S ++
Sbjct: 242 CEYIVALKGIAIAYSKPIGPVLLKDFLLLNPQMIVSVPRIWEGIRIGIIKKV-SESFIKK 300
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
V +++ Y K + G L+ K+ ++L++L L+ I +++P+ LL +
Sbjct: 301 FVFGGFLKVGIIYAKLKERFLG--LSPIYKKTNFLISLFSKLFLFIGIVLIFPIKLLGDI 358
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LV+KKI++A+G + + GVSGGG+L ++D F++A+G+KV GYGLTE+ P+++ RR
Sbjct: 359 LVFKKIKNALGQNFEFGVSGGGALVDYVDYFFKAVGIKVLEGYGLTETGPILSVRRLKGP 418
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
V +VG + E K+V + VLP G KG + VR Q+M GYFK+ + T + L EDGW
Sbjct: 419 VAKTVGPILPDVEYKVVGID-GRVLPYGEKGELWVRSPQIMSGYFKDKAKTSEVLTEDGW 477
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
NTGD+ + ++ + + GR+KDTIVL GEN+EP LE +S I
Sbjct: 478 FNTGDLVRLTINNE----------ISIVGRSKDTIVLRGGENIEPEPLERVLGKSLFIEN 527
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT--SK 437
I+++GQDQ+ GA+IVP+ + + A + + S+L + ++ LY + T +K
Sbjct: 528 IMIVGQDQKFLGAVIVPNFDNLEKWANSSGVSFSSRSDLLANEDVNKLYSKHISDTINTK 587
Query: 438 CSF----QIGPIHVVDEPFTV 454
F +I ++ +PFT+
Sbjct: 588 LGFKNFEKIVGFVLLQDPFTI 608
>gi|218249826|ref|YP_002375101.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi ZS7]
gi|218165014|gb|ACK75075.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi ZS7]
Length = 645
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 160/441 (36%), Positives = 256/441 (58%), Gaps = 24/441 (5%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERA 82
S DIAT +YTSGTTG PKGVML H++ + Q+ LYD +P + G +S+LP WH +ERA
Sbjct: 182 SKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRLYDYLPTLKPGKIMISILPLWHSFERA 241
Query: 83 CGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
C Y + +GI + Y+ L D P ++SVP ++E + GI K++ + S ++
Sbjct: 242 CEYIVALKGIAIAYSKPIGPVLLKDFLLLNPQVIVSVPRIWEGIRIGIIKKV-SESFIKK 300
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
V +++ Y K + G L+ K+ ++L++L L+ I +++P+ LL +
Sbjct: 301 FVFGGFLKVGIIYAKLKERFLG--LSPIYKKTNFLISLFSKLFLFIGIVLIFPIKLLGDI 358
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LV+KKI++A+G + + GVSGGG+L ++D F++A+G+KV GYGLTE+ P+++ RR
Sbjct: 359 LVFKKIKNALGQNFEFGVSGGGALVDYVDYFFKAVGIKVLEGYGLTETGPILSVRRLKGP 418
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
V +VG + E K+V + VLP G KG + VR Q+M GYFK+ + T + L EDGW
Sbjct: 419 VAKTVGPILPDVEYKVVGID-GRVLPYGEKGELWVRSPQIMSGYFKDKAKTSEVLTEDGW 477
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
NTGD+ + ++ + + GR+KDTIVL GEN+EP LE +S I
Sbjct: 478 FNTGDLVRLTINNE----------ISIVGRSKDTIVLRGGENIEPEPLERVLGKSLFIEN 527
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT--SK 437
I+++GQDQ+ GA+IVP+ + + A + + S+L + ++ LY + T +K
Sbjct: 528 IMIVGQDQKFLGAVIVPNFDNLEKWANSSGVSFSSRSDLLANEDVNKLYSKHISDTINTK 587
Query: 438 CSF----QIGPIHVVDEPFTV 454
F +I ++ +PFT+
Sbjct: 588 LGFKNFEKIVGFVLLQDPFTI 608
>gi|408671205|ref|YP_006871276.1| long-chain-fatty-acid CoA ligase [Borrelia garinii NMJW1]
gi|407241027|gb|AFT83910.1| long-chain-fatty-acid CoA ligase [Borrelia garinii NMJW1]
Length = 645
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 148/378 (39%), Positives = 229/378 (60%), Gaps = 18/378 (4%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERA 82
S DIAT +YTSGTTG PKGVML H++ + Q+ LYD +PA + G +S+LP WH +ERA
Sbjct: 182 SKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRLYDYLPAIKPGKIMISILPLWHSFERA 241
Query: 83 CGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
C Y + +G+ + Y+ L D P +ISVP ++E + GI K++ + S ++
Sbjct: 242 CEYIVALKGVAIAYSKPIGPVLLKDFLLLNPQMIISVPRIWEGIRIGIIKKV-SESLIKK 300
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+V ++I Y + GF K+P+ +++ L+ I +++P+ LL +
Sbjct: 301 LVFGGFLKIGIIYAKLNEKFLGFSPV--YKKPNLFISIFSKLFLFIGIILIFPIKLLGDI 358
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LV+KKI++A+G + + GVSGGG+L ++D F++A+G+KV GYGLTE+ PV++ RR
Sbjct: 359 LVFKKIKNALGQNFEFGVSGGGALVDYVDYFFKAVGIKVLEGYGLTETGPVLSVRRLKGP 418
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
V +VG + E K+V + +VLP G KG + V+ Q+M GYFK+ + T + L EDGW
Sbjct: 419 VARTVGPILPDVEYKVVGID-GKVLPYGEKGELWVKSPQIMSGYFKDKAKTNEVLTEDGW 477
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
NTGD+ + ++ + + GR+KDTIVL GEN+EP LE +S I
Sbjct: 478 FNTGDLVRLTINNE----------ISIVGRSKDTIVLRGGENIEPEPLERVLGKSLFIEN 527
Query: 380 IVVIGQDQRRPGAIIVPD 397
I+++GQDQ+ GA+IVP+
Sbjct: 528 IMIVGQDQKFLGAVIVPN 545
>gi|221218169|ref|ZP_03589635.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 72a]
gi|226321899|ref|ZP_03797425.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi Bol26]
gi|221192117|gb|EEE18338.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 72a]
gi|226233088|gb|EEH31841.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi Bol26]
Length = 645
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 160/441 (36%), Positives = 256/441 (58%), Gaps = 24/441 (5%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERA 82
S DIAT +YTSGTTG PKGVML H++ + Q+ LYD +P + G +S+LP WH +ERA
Sbjct: 182 SKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRLYDYLPTLKPGKIMISILPLWHSFERA 241
Query: 83 CGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
C Y + +GI + Y+ L D P ++SVP ++E + GI K++ + S ++
Sbjct: 242 CEYIVALKGIAIAYSKPIGPVLLKDFLLLNPQMIVSVPRIWEGIRIGIIKKV-SESFIKK 300
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
V +++ Y K + G L+ K+ ++L++L L+ I +++P+ LL +
Sbjct: 301 FVFGGFLKVGIIYAKLKERFLG--LSPIYKKTNFLISLFSKLFLFIGIVLIFPIKLLGDI 358
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LV+KKI++A+G + + GVSGGG+L ++D F++A+G+KV GYGLTE+ P+++ RR
Sbjct: 359 LVFKKIKNALGQNFEFGVSGGGALVDYVDYFFKAVGIKVLEGYGLTETGPILSVRRLKGP 418
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
V +VG + E K+V + VLP G KG + VR Q+M GYFK+ + T + L EDGW
Sbjct: 419 VAKTVGPILPDVEYKVVGID-GRVLPYGEKGELWVRSPQIMSGYFKDKAKTSEVLTEDGW 477
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
NTGD+ + ++ + + GR+KDTIVL GEN+EP LE +S I
Sbjct: 478 FNTGDLVRLTINNE----------ISIVGRSKDTIVLRGGENIEPEPLERVLGKSLFIEN 527
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT--SK 437
I+++GQDQ+ GA+IVP+ + + A + + S+L + ++ LY + T +K
Sbjct: 528 IMIVGQDQKFLGAVIVPNFDNLEKWANSSGVSFSSRSDLLANEDVNKLYSKHISDTINTK 587
Query: 438 CSF----QIGPIHVVDEPFTV 454
F +I ++ +PFT+
Sbjct: 588 LGFKNFEKIVGFVLLQDPFTI 608
>gi|224534678|ref|ZP_03675250.1| long-chain-fatty-acid CoA ligase [Borrelia spielmanii A14S]
gi|224513926|gb|EEF84248.1| long-chain-fatty-acid CoA ligase [Borrelia spielmanii A14S]
Length = 645
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 152/411 (36%), Positives = 241/411 (58%), Gaps = 18/411 (4%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERA 82
S DIAT +YTSGTTG PKGVML H++ + Q+ LYD +P + G +S+LP WH +ERA
Sbjct: 182 SKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRLYDYLPTLKPGKIMISILPLWHSFERA 241
Query: 83 CGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
C Y + +GI + Y+ L D P +ISVP ++E + GI K++ + S ++
Sbjct: 242 CEYIVALKGIAIAYSKPIGPVLLKDFLLLNPQMIISVPRIWEGIRIGIIKKV-SESLIKK 300
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
++ ++I Y K + GF K+P+ ++L L+ + +++P+ LL +
Sbjct: 301 LMFGGFLKIGIVYAKLKEKFLGFSPV--YKKPNLFISLFLKLFLFVGMILIFPVKLLGDI 358
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LV+KKI+ A+G + + GVSGGG+L ++D F++A+G+KV GYGLTE+ P+++ RR
Sbjct: 359 LVFKKIKKALGQNFEFGVSGGGALVDYVDYFFKAVGIKVLEGYGLTETGPILSVRRFKGP 418
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
V +VG + E K+V + +VLP G KG + V+ QVM GYFK+ + T + L EDGW
Sbjct: 419 VARTVGPILPDVEYKVVGID-GKVLPYGEKGELWVKSPQVMSGYFKDKAKTSEVLTEDGW 477
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
N+GD+ + ++ + + GR+KDTIVL GEN+EP LE +S I
Sbjct: 478 FNSGDLVRLTINNE----------ISIVGRSKDTIVLRGGENIEPEPLERVLGKSLFIEN 527
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
I+++GQDQ+ GAIIVP+ + + A + + +L + ++ LY +
Sbjct: 528 IMIVGQDQKFLGAIIVPNFDNLEKWANSSGVSFSSRGDLLANEDVNKLYSK 578
>gi|386853996|ref|YP_006203281.1| Long-chain-fatty-acid CoA ligase [Borrelia garinii BgVir]
gi|365194030|gb|AEW68928.1| Long-chain-fatty-acid CoA ligase [Borrelia garinii BgVir]
Length = 645
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 148/378 (39%), Positives = 229/378 (60%), Gaps = 18/378 (4%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERA 82
S DIAT +YTSGTTG PKGVML H++ + Q+ LYD +PA + G +S+LP WH +ERA
Sbjct: 182 SKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRLYDYLPAIKPGKIMISILPLWHSFERA 241
Query: 83 CGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
C Y + +G+ + Y+ L D P +ISVP ++E + GI K++ + S ++
Sbjct: 242 CEYIVALKGVAIAYSKPIGPVLLKDFLLLNPQMIISVPRIWEGIRIGIIKKV-SESLIKK 300
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+V ++I Y + GF K+P+ +++ L+ I +++P+ LL +
Sbjct: 301 LVFGGFLKIGIIYAKLNEKFLGFSPV--YKKPNLFISIFSKLFLFIGIILIFPIKLLGDI 358
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LV+KKI++A+G + + GVSGGG+L ++D F++A+G+KV GYGLTE+ PV++ RR
Sbjct: 359 LVFKKIKNALGQNFEFGVSGGGALVDYVDYFFKAVGIKVLEGYGLTETGPVLSVRRLKGP 418
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
V +VG + E K+V + +VLP G KG + V+ Q+M GYFK+ + T + L EDGW
Sbjct: 419 VARTVGPILPDVEYKVVGID-GKVLPYGEKGELWVKSPQIMSGYFKDKAKTNEVLTEDGW 477
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
NTGD+ + ++ + + GR+KDTIVL GEN+EP LE +S I
Sbjct: 478 FNTGDLVRLTINNE----------ISIVGRSKDTIVLRGGENIEPEPLERVLGKSLFIEN 527
Query: 380 IVVIGQDQRRPGAIIVPD 397
I+++GQDQ+ GA+IVP+
Sbjct: 528 IMIVGQDQKFLGAVIVPN 545
>gi|224533578|ref|ZP_03674167.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi CA-11.2a]
gi|225548723|ref|ZP_03769770.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 94a]
gi|224513251|gb|EEF83613.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi CA-11.2a]
gi|225370753|gb|EEH00189.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 94a]
Length = 645
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 160/441 (36%), Positives = 255/441 (57%), Gaps = 24/441 (5%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERA 82
S DIAT +YTSGTTG PKGVML H++ + Q+ LYD +P + G +S+LP WH +ERA
Sbjct: 182 SKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRLYDYLPTLKPGKIMISILPLWHSFERA 241
Query: 83 CGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
C Y + +GI + Y+ L D P ++SVP ++E + GI K++ + S ++
Sbjct: 242 CEYIVALKGIAIAYSKPIGPVLLKDFLLLNPQMIVSVPRIWEGIRIGIIKKV-SESFIKK 300
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
V +++ Y K + G L+ K+ ++L++L L+ I +++P+ LL +
Sbjct: 301 FVFGGFLKVGIIYAKLKERFLG--LSPIYKKTNFLISLFSKLFLFIGIVLIFPIKLLGDI 358
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LV+KKI++A G + + GVSGGG+L ++D F++A+G+KV GYGLTE+ P+++ RR
Sbjct: 359 LVFKKIKNAFGQNFEFGVSGGGALVDYVDYFFKAVGIKVLEGYGLTETGPILSVRRLKGP 418
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
V +VG + E K+V + VLP G KG + VR Q+M GYFK+ + T + L EDGW
Sbjct: 419 VAKTVGPILPDVEYKVVGID-GRVLPYGEKGELWVRSPQIMSGYFKDKAKTSEVLTEDGW 477
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
NTGD+ + ++ + + GR+KDTIVL GEN+EP LE +S I
Sbjct: 478 FNTGDLVRLTINNE----------ISIVGRSKDTIVLRGGENIEPEPLERVLGKSLFIEN 527
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT--SK 437
I+++GQDQ+ GA+IVP+ + + A + + S+L + ++ LY + T +K
Sbjct: 528 IMIVGQDQKFLGAVIVPNFDNLEKWANSSGVSFSSRSDLLANEDVNKLYSKHISDTINTK 587
Query: 438 CSF----QIGPIHVVDEPFTV 454
F +I ++ +PFT+
Sbjct: 588 LGFKNFEKIVGFVLLQDPFTI 608
>gi|294827577|ref|NP_710287.2| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. 56601]
gi|386072580|ref|YP_005986897.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. IPAV]
gi|293385420|gb|AAN47305.2| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. 56601]
gi|353456369|gb|AER00914.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. IPAV]
Length = 683
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 181/497 (36%), Positives = 253/497 (50%), Gaps = 74/497 (14%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI-----RSLYDIVPAENGDKFLSM 72
+ E I +D+ T +YTSGTTG PKGVML H N++HQ+ L +I P D LS+
Sbjct: 171 RIEEIKPEDLFTLIYTSGTTGMPKGVMLMHSNMIHQMVYVVPMLLTEIKPT---DSMLSI 227
Query: 73 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
LP WH++ER Y S GI+ YT V +L++DL + +P +M S P V+E +Y+ I +I
Sbjct: 228 LPIWHIFERINEYGAISSGIQTYYTKVADLRNDLAKAKPSFMASAPRVWENVYANIYNKI 287
Query: 133 FTSSAA---RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ------------------ 171
RRV+ + S Y A +R G + +
Sbjct: 288 NDPKQTPPIRRVLFKLAYFFSKHYNASRRFLNGLEVDYENRNIMKSLVIGIRSLIVLLLT 347
Query: 172 ----------------PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-K 214
P Y + L +WL+ ++ L + +V KI++A G K
Sbjct: 348 GPFTLSAISILAYLTLPVYGIHLPNWLFFSLVGLGLVFNAKTLDTIVLSKIRAATGGRLK 407
Query: 215 AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 274
A +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+
Sbjct: 408 ASLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELI 467
Query: 275 IVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
I D N EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTG
Sbjct: 468 IKDENGNVLTHINDQYEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTG 526
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
DIG+I L L GRAKDT+VL GENVEP+ +E S I+Q +VI
Sbjct: 527 DIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVI 576
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF- 440
GQDQ+ GAIIVPD E + + K I + E+ K K I E+R + S K F
Sbjct: 577 GQDQKVLGAIIVPDMEHLGVWCKENGIDSSKIDEIIKNPKVIDFYKKEVRSYNSTKTGFK 636
Query: 441 ---QIGPIHVVDEPFTV 454
Q+ + + +PF V
Sbjct: 637 SFEQVQHVILAKKPFEV 653
>gi|225552232|ref|ZP_03773172.1| long-chain-fatty-acid CoA ligase [Borrelia sp. SV1]
gi|225371230|gb|EEH00660.1| long-chain-fatty-acid CoA ligase [Borrelia sp. SV1]
Length = 645
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 161/441 (36%), Positives = 255/441 (57%), Gaps = 24/441 (5%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERA 82
S DIAT +YTSGTTG PKGVML H++ + Q+ LYD +P + G +S+LP WH +ERA
Sbjct: 182 SKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRLYDYLPTLKPGKIMISILPLWHSFERA 241
Query: 83 CGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
C Y + +GI + Y+ L D P +ISVP ++E + GI K++ + S ++
Sbjct: 242 CEYIVALKGIAIAYSKPIGPVLLKDFLLLNPQMIISVPRIWEGIRIGIIKKV-SESFIKK 300
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
V +++ Y K + G L+ K+ ++L++L L+ I +++P+ LL +
Sbjct: 301 FVFGGFLKVGIIYAKLKERFLG--LSPIYKKTNFLISLFSKLFLFIGIVLIFPIKLLGDI 358
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LV+KKI++A+G + + GVSGGG+L ++D F++A+G+KV GYGLTE+ P+++ RR
Sbjct: 359 LVFKKIKNALGQNFEFGVSGGGALVDYVDYFFKAVGIKVLEGYGLTETGPILSVRRFKGP 418
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
V +VG + E K+V + VLP G KG + VR Q+M GYFK+ T + L EDGW
Sbjct: 419 VAKTVGPILPDVEYKVVGID-GRVLPYGEKGELWVRSPQIMSGYFKDKVKTSEVLTEDGW 477
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
NTGD+ + ++ + + GR+KDTIVL GEN+EP LE +S I
Sbjct: 478 FNTGDLVRLTINNE----------ISIVGRSKDTIVLRGGENIEPEPLERVLGKSLFIEN 527
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT--SK 437
I+++GQDQ+ GA+IVP+ + + A + + S+L + ++ LY + T +K
Sbjct: 528 IMIVGQDQKFLGAVIVPNFDNLEKWANSSGVSFSSRSDLLANEDVNKLYSKHISDTINTK 587
Query: 438 CSF----QIGPIHVVDEPFTV 454
F +I ++ +PFT+
Sbjct: 588 LGFKNFEKIVGFVLLQDPFTI 608
>gi|224004188|ref|XP_002295745.1| probable long-chain-fatty-acid--CoA ligase [Thalassiosira
pseudonana CCMP1335]
gi|209585777|gb|ACI64462.1| probable long-chain-fatty-acid--CoA ligase [Thalassiosira
pseudonana CCMP1335]
Length = 658
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 232/395 (58%), Gaps = 31/395 (7%)
Query: 17 YKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR------SLYDIVPAENGDKFL 70
++ + DD+AT VYTSGTTG PKGVMLTH NLLHQI+ YD+ G+ +
Sbjct: 165 FQLPKLKKDDLATIVYTSGTTGRPKGVMLTHGNLLHQIQLRFAPTKKYDVSEPLPGEVMV 224
Query: 71 SMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQK 130
S+LP WH+ ERA IFSRG L+Y+ V++LK+DL ++PH+M+ VP V E + G++
Sbjct: 225 SILPVWHITERAAELCIFSRGCTLVYSNVKHLKNDLALHKPHWMMLVPRVLEKVALGVKD 284
Query: 131 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 190
+ + + ++ARA+I F A + + + R Q + L +++R + +
Sbjct: 285 KF----SKKNMIARAMIHF-FTLVASTK-SKLLKVARGQVIAAKKPNLFRRVFSRCLATL 338
Query: 191 LWPLHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
L PL + LV+ K+++A+ G K VSGG +L ++ FYE GV + VGYGLTE SP
Sbjct: 339 LTPLDAIGHALVWNKVKAALGGRQKLIVSGGSALNGSLEEFYETCGVLLIVGYGLTECSP 398
Query: 250 VIAARRPTCNVL--GSVGHPINHTEIKIVDAETN------EVLPAGSKGIVKVRGSQVMQ 301
+I RR N++ G VG P+ TEI++VD + G G+V +G QVM+
Sbjct: 399 LICHRRSDSNLVAGGCVGLPVTSTEIRVVDVNAKAGDAERTSIEKGQIGLVLAKGPQVMK 458
Query: 302 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 361
GY+ N AT +++D+ GWL+TGD+G+I P + L + GRAKDTIVLS GEN
Sbjct: 459 GYYNNQKATNKSIDKYGWLDTGDLGYINPATND---------LFITGRAKDTIVLSNGEN 509
Query: 362 VEPLELEEAALRSSLIRQI-VVIGQDQRRPGAIIV 395
VEP LE+ L ++I Q+ + QD+++ AI V
Sbjct: 510 VEPSPLEDVLLGCNMIDQVTITTSQDEKQLHAIAV 544
>gi|219685238|ref|ZP_03540058.1| long-chain-fatty-acid CoA ligase [Borrelia garinii Far04]
gi|219673334|gb|EED30353.1| long-chain-fatty-acid CoA ligase [Borrelia garinii Far04]
Length = 645
Score = 264 bits (674), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 151/411 (36%), Positives = 242/411 (58%), Gaps = 18/411 (4%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERA 82
S DIAT +YTSGTTG PKGVML H++ + Q+ LYD +P + G +S+LP WH +ERA
Sbjct: 182 SKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRLYDYLPEIKPGKIMISILPLWHSFERA 241
Query: 83 CGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
C Y + +G+ + Y+ L D P +ISVP ++E + GI K++ + S ++
Sbjct: 242 CEYIVALKGVTIAYSKPIGPVLLKDFLLLNPQMIISVPRIWEGIRIGIIKKV-SESLIKK 300
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+V +++ Y + GF K+P+ +++ L+ I +++P+ LL +
Sbjct: 301 LVFGGFLKVGIIYAKLNEKFLGFSPV--YKKPNLFISIFSKLFLFIGIILIFPIKLLGDI 358
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LV+KKI++A+G + + GVSGGG+L ++D F++A+G+KV GYGLTE+ P+++ RR
Sbjct: 359 LVFKKIKNALGQNFEFGVSGGGALVDYVDYFFKAVGIKVLEGYGLTETGPILSVRRLKGP 418
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
V +VG + E K+V + +VLP G KG + VR Q+M GYFK+ + T + L EDGW
Sbjct: 419 VARTVGPILPDVEYKVVGID-GKVLPYGEKGELWVRSPQIMSGYFKDKAKTSEVLTEDGW 477
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
L TGD+ + ++ + + GR+KDTIVL GEN+EP LE +S I
Sbjct: 478 LKTGDLVRLTINNE----------ISIVGRSKDTIVLRGGENIEPEPLERILGKSLFIEN 527
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
I+++GQDQ+ GA+IVP+ + + A + + S+L + ++ LY +
Sbjct: 528 IMIVGQDQKFLGAVIVPNFDNLEKWANSNGVSFSSRSDLLVNEDVNKLYSK 578
>gi|219684359|ref|ZP_03539303.1| long-chain-fatty-acid CoA ligase [Borrelia garinii PBr]
gi|219672348|gb|EED29401.1| long-chain-fatty-acid CoA ligase [Borrelia garinii PBr]
Length = 645
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 151/411 (36%), Positives = 242/411 (58%), Gaps = 18/411 (4%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERA 82
S DIAT +YTSGTTG PKGVML H++ + Q+ LYD +P + G +S+LP WH +ERA
Sbjct: 182 SKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRLYDYLPEIKPGKIMISILPLWHSFERA 241
Query: 83 CGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
C Y + +G+ + Y+ L D P +ISVP ++E + GI K++ + S ++
Sbjct: 242 CEYIVALKGVAIAYSKPIGPVLLKDFLLLNPQMIISVPRIWEGIRIGIIKKV-SESLIKK 300
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+V +++ Y + GF K+P+ +++ L+ I +++P+ LL +
Sbjct: 301 LVFGGFLKVGIIYAKLNEKFLGFSPV--YKKPNLFISIFSKLFLFIGIILIFPIKLLGDI 358
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LV+KKI++A+G + + GVSGGG+L ++D F++A+G+KV GYGLTE+ P+++ RR
Sbjct: 359 LVFKKIKNALGQNFEFGVSGGGALVDYVDYFFKAVGIKVLEGYGLTETGPILSVRRLKGP 418
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
V +VG + E K+V + +VLP G KG + VR Q+M GYFK+ + T + L EDGW
Sbjct: 419 VARTVGPILPDVEYKVVGID-GKVLPYGEKGELWVRSPQIMSGYFKDKAKTSEVLTEDGW 477
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
L TGD+ + ++ + + GR+KDTIVL GEN+EP LE +S I
Sbjct: 478 LKTGDLVRLTINNE----------ISIVGRSKDTIVLRGGENIEPEPLERILGKSLFIEN 527
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
I+++GQDQ+ GA+IVP+ + + A + + S+L + ++ LY +
Sbjct: 528 IMIVGQDQKFLGAVIVPNFDNLEKWANSNGVSFSSRSDLLVNEDVNRLYSK 578
>gi|455790029|gb|EMF41919.1| AMP-binding enzyme [Leptospira interrogans serovar Lora str. TE
1992]
Length = 683
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 180/497 (36%), Positives = 253/497 (50%), Gaps = 74/497 (14%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI-----RSLYDIVPAENGDKFLSM 72
+ E I +D+ T +YTSGTTG PKGVML H N++HQ+ L +I P D LS+
Sbjct: 171 RIEEIKPEDLFTLIYTSGTTGMPKGVMLMHSNMIHQMVYVVPMLLTEIKPT---DSMLSI 227
Query: 73 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
LP WH++ER Y S GI+ YT V +L++DL + +P +M S P V+E +Y+ I ++
Sbjct: 228 LPIWHIFERINEYGAISSGIQTYYTKVADLRNDLAKAKPSFMASAPRVWENVYANIYNKV 287
Query: 133 FTSSAA---RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ------------------ 171
RRV+ + S Y A +R G + +
Sbjct: 288 NDPKQTPPIRRVLFKLAYFFSKHYNASRRFLNGLEVDYENRNIMKSLVIGIRSLIVLLLT 347
Query: 172 ----------------PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-K 214
P Y + L +WL+ ++ L + +V KI++A G K
Sbjct: 348 GPFTLSAISILAYLTLPVYGIHLPNWLFFSLVGLGLVFNAKTLDTIVLSKIRAATGGRLK 407
Query: 215 AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 274
A +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+
Sbjct: 408 ASLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELI 467
Query: 275 IVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
I D N EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTG
Sbjct: 468 IKDENGNVLTHINDQYEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTG 526
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
DIG+I L L GRAKDT+VL GENVEP+ +E S I+Q +VI
Sbjct: 527 DIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVI 576
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF- 440
GQDQ+ GAIIVPD E + + K I + E+ K K I E+R + S K F
Sbjct: 577 GQDQKVLGAIIVPDMEHLGVWCKENGIDSSKIDEIIKNPKVIDFYKKEVRSYNSTKTGFK 636
Query: 441 ---QIGPIHVVDEPFTV 454
Q+ + + +PF V
Sbjct: 637 SFEQVQHVILAKKPFEV 653
>gi|417767938|ref|ZP_12415873.1| AMP-binding enzyme [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|400349383|gb|EJP01676.1| AMP-binding enzyme [Leptospira interrogans serovar Bulgarica str.
Mallika]
Length = 683
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 180/497 (36%), Positives = 253/497 (50%), Gaps = 74/497 (14%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI-----RSLYDIVPAENGDKFLSM 72
+ E I +D+ T +YTSGTTG PKGVML H N++HQ+ L +I P D LS+
Sbjct: 171 RIEEIKPEDLFTLIYTSGTTGMPKGVMLMHSNMIHQMVYVVPMLLTEIKPT---DSMLSI 227
Query: 73 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
LP WH++ER Y S GI+ YT V +L++DL + +P +M S P V+E +Y+ I ++
Sbjct: 228 LPIWHIFERINEYGAISSGIQTYYTKVADLRNDLAKAKPSFMASAPRVWENVYANIYNKV 287
Query: 133 FTSSAA---RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ------------------ 171
RRV+ + S Y A +R G + +
Sbjct: 288 NDPKQTPPIRRVLFKLAYFFSKHYNASRRFLNGLEVDYENRNIMKSLVIGIRSLIVLLLT 347
Query: 172 ----------------PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-K 214
P Y + L +WL+ ++ L + +V KI++A G K
Sbjct: 348 GPFTLSAISILAYLTLPVYGIHLPNWLFFSLVGLGLIFNAKTLDTIVLSKIRAATGGRLK 407
Query: 215 AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 274
A +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+
Sbjct: 408 ASLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELI 467
Query: 275 IVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
I D N EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTG
Sbjct: 468 IKDENGNVLTHINDQYEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTG 526
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
DIG+I L L GRAKDT+VL GENVEP+ +E S I+Q +VI
Sbjct: 527 DIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVI 576
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF- 440
GQDQ+ GAIIVPD E + + K I + E+ K K I E+R + S K F
Sbjct: 577 GQDQKVLGAIIVPDMEHLGVWCKENGIDSSKIDEIIKNPKVIDFYKKEVRSYNSTKTGFK 636
Query: 441 ---QIGPIHVVDEPFTV 454
Q+ + + +PF V
Sbjct: 637 SFEQVQHVILAKKPFEV 653
>gi|51598846|ref|YP_073034.1| long-chain-fatty-acid CoA ligase [Borrelia garinii PBi]
gi|51573417|gb|AAU07442.1| long-chain-fatty-acid CoA ligase [Borrelia garinii PBi]
Length = 645
Score = 263 bits (673), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 148/378 (39%), Positives = 229/378 (60%), Gaps = 18/378 (4%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERA 82
S DIAT +YTSGTTG PKGVML H++ + Q+ LYD +PA + G +S+LP WH +ERA
Sbjct: 182 SKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRLYDYLPAIKPGKIMISILPLWHSFERA 241
Query: 83 CGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
C Y + +G+ + Y+ L D P +ISVP ++E + GI K++ + S ++
Sbjct: 242 CEYIVALKGVAIAYSKPIGPVLLKDFLLLNPQMIISVPRIWEGIRIGIIKKV-SESLIKK 300
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+V ++I Y + GF ++P+ +++ L+ I +++P+ LL +
Sbjct: 301 LVFGGFLKIGIIYAKLNEKFLGFSPV--YRKPNLFISIFSKLFLFIGIILIFPIKLLGDI 358
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LV+KKI++A+G + + GVSGGG+L ++D F++AIG+KV GYGLTE+ PV++ RR
Sbjct: 359 LVFKKIKNALGQNFEFGVSGGGALVDYVDYFFKAIGIKVLEGYGLTETGPVLSVRRLKGP 418
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
V +VG + E K+V + +VLP G KG + V+ Q+M GYFK+ + T + L EDGW
Sbjct: 419 VARTVGPILPDVEYKVVGID-GKVLPYGEKGELWVKSPQIMSGYFKDKAKTSEVLTEDGW 477
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
NTGD+ + ++ + + GR+KDTIVL GEN+EP LE +S I
Sbjct: 478 FNTGDLVRLTINNE----------ISIVGRSKDTIVLRGGENIEPEPLERVLGKSLFIEN 527
Query: 380 IVVIGQDQRRPGAIIVPD 397
I+++GQDQ+ GA+IVP+
Sbjct: 528 IMIVGQDQKFLGAVIVPN 545
>gi|359729105|ref|ZP_09267801.1| long-chain-fatty-acid--CoA ligase [Leptospira weilii str.
2006001855]
gi|417780351|ref|ZP_12428115.1| AMP-binding enzyme [Leptospira weilii str. 2006001853]
gi|410779590|gb|EKR64204.1| AMP-binding enzyme [Leptospira weilii str. 2006001853]
Length = 683
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 180/495 (36%), Positives = 249/495 (50%), Gaps = 74/495 (14%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-----ENGDKFLSMLP 74
E I +D+ T +YTSGTTG PKGVML H N++HQ + +VP + D LS+LP
Sbjct: 173 EDIKPEDLFTLIYTSGTTGMPKGVMLMHSNMVHQ---MVHVVPMLLTDIKTTDSMLSILP 229
Query: 75 PWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 134
WH++ER Y SRGI+ YT V +LK+DL + +P +M S P V+E +Y+ I ++
Sbjct: 230 IWHIFERVNEYGAISRGIQTYYTKVSDLKNDLTKAKPSFMGSAPRVWENVYTNIYNKVND 289
Query: 135 SSAA---RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ-------------------- 171
R+ + + S Y A +R G + +
Sbjct: 290 PKQTPPLRKFLFKLAYFFSKHYNASRRFLSGLEVDYENRNILKSIAIGTKSLIVLLLTGP 349
Query: 172 --------------PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAG 216
P+Y V L W + I L + +V KI++A G K
Sbjct: 350 FTLSAMTVLAYLALPTYGVHLPSWFFLMIAGLGLIFNAKTLDAVVLSKIRAATGGRLKGS 409
Query: 217 VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIV 276
+SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I
Sbjct: 410 LSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFAKPIIGSVGFLVPKSELMIK 469
Query: 277 DAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 325
D N EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTGDI
Sbjct: 470 DENGNVLTHINDKFEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTGDI 528
Query: 326 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 385
G+I L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQ
Sbjct: 529 GFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQ 578
Query: 386 DQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF--- 440
D++ GAIIVPD E + + K I + EL K K I E+R + S K F
Sbjct: 579 DKKVLGAIIVPDMEHLTLWCKENGIDSSKIDELIKNPKVIEFYKKEVRNYNSTKTGFKSF 638
Query: 441 -QIGPIHVVDEPFTV 454
Q+ I + +PF V
Sbjct: 639 EQVQHIILTKKPFEV 653
>gi|216263481|ref|ZP_03435476.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii ACA-1]
gi|215980325|gb|EEC21146.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii ACA-1]
Length = 645
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 152/411 (36%), Positives = 238/411 (57%), Gaps = 18/411 (4%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERA 82
S DIAT +YTSGTTG PKGVML H++ + Q+ LYD +P + G +S+LP WH +ERA
Sbjct: 182 SKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRLYDYLPTLKPGKIMISILPLWHSFERA 241
Query: 83 CGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
C Y + +GI + Y+ L D P +ISVP ++E + GI K++ + S ++
Sbjct: 242 CEYIVALKGIAIAYSKPIGPVLLKDFSLLNPQMIISVPRIWEGIRIGIIKKV-SESLIKK 300
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
++ +RI Y K GF K+P+ ++L ++ + ++ P+ LL +
Sbjct: 301 LMFGGFLRIGIVYAKLKEKILGFSPV--YKKPNLFISLFSKIFLFVGIVLILPIKLLGDI 358
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LV+KKI+ A+G + + GVSGGG+L ++D F++A+G+KV GYGLTE+ P+++ RR
Sbjct: 359 LVFKKIKKALGQNFEFGVSGGGALVDYVDYFFKAVGIKVLEGYGLTETGPILSVRRLKGP 418
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
V +VG + E K+V + +VL G KG + VR Q+M GYFK+ + T + L EDGW
Sbjct: 419 VARTVGPILPDVEYKVVGVD-EKVLSYGEKGELWVRSPQIMSGYFKDKAKTSEVLTEDGW 477
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
NTGD+ + ++ + + GR+KDTIVL GEN+EP LE +S I
Sbjct: 478 FNTGDLVRLTINNE----------ISIVGRSKDTIVLRGGENIEPEPLERVLGKSLFIEN 527
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
I+++GQDQ+ GAIIVP+ + + A + + +L + ++ LY +
Sbjct: 528 IMIVGQDQKFLGAIIVPNFDNLEKWANSSGVSFSSRGDLLANEDVNKLYSK 578
>gi|421124587|ref|ZP_15584844.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421133743|ref|ZP_15593889.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410022188|gb|EKO88967.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410437718|gb|EKP86817.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
Length = 683
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 180/497 (36%), Positives = 253/497 (50%), Gaps = 74/497 (14%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI-----RSLYDIVPAENGDKFLSM 72
+ E I +D+ T +YTSGTTG PKGVML H N++HQ+ L +I P D LS+
Sbjct: 171 RIEEIKPEDLFTLIYTSGTTGMPKGVMLMHSNMIHQMVYVVPMLLTEIKPT---DSMLSI 227
Query: 73 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
LP WH++ER Y S GI+ YT V +L++DL + +P +M S P V+E +Y+ I ++
Sbjct: 228 LPIWHIFERINEYGAISSGIQTYYTKVADLRNDLAKAKPSFMASAPRVWENVYANIYNKV 287
Query: 133 FTSSAA---RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ------------------ 171
RRV+ + S Y A +R G + +
Sbjct: 288 NDPKQTPPIRRVLFKLAYFFSKHYNASRRFLNGLEVDYENRNIMKSLVIGIRSLIVLLLT 347
Query: 172 ----------------PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-K 214
P Y + L +WL+ ++ L + +V KI++A G K
Sbjct: 348 GPFTLSAISILAYLTLPVYGIHLPNWLFFSLVGLGLVFNAKTLDTIVLSKIRAATGGRLK 407
Query: 215 AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 274
A +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+
Sbjct: 408 ASLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELI 467
Query: 275 IVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
I D N EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTG
Sbjct: 468 IKDENGNVLTHINDQYEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTG 526
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
DIG+I L L GRAKDT+VL GENVEP+ +E S I+Q +VI
Sbjct: 527 DIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVI 576
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF- 440
GQDQ+ GAIIVPD E + + K I + E+ K K I E+R + S K F
Sbjct: 577 GQDQKVLGAIIVPDMEHLGVWCKENGIDSSKIDEIIKNPKVIDFYKKEVRSYNSTKTGFK 636
Query: 441 ---QIGPIHVVDEPFTV 454
Q+ + + +PF V
Sbjct: 637 SFEQVQHVILAKKPFEV 653
>gi|417763141|ref|ZP_12411124.1| AMP-binding enzyme [Leptospira interrogans str. 2002000624]
gi|417770357|ref|ZP_12418267.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Pomona]
gi|417774734|ref|ZP_12422598.1| AMP-binding enzyme [Leptospira interrogans str. 2002000621]
gi|417785227|ref|ZP_12432932.1| AMP-binding enzyme [Leptospira interrogans str. C10069]
gi|418669903|ref|ZP_13231277.1| AMP-binding enzyme [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|418674006|ref|ZP_13235316.1| AMP-binding enzyme [Leptospira interrogans str. 2002000623]
gi|418680806|ref|ZP_13242044.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|418689298|ref|ZP_13250420.1| AMP-binding enzyme [Leptospira interrogans str. FPW2026]
gi|418698387|ref|ZP_13259364.1| AMP-binding enzyme [Leptospira interrogans serovar Bataviae str.
L1111]
gi|418705067|ref|ZP_13265932.1| AMP-binding enzyme [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|418707727|ref|ZP_13268547.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|418713238|ref|ZP_13273965.1| AMP-binding enzyme [Leptospira interrogans str. UI 08452]
gi|418726949|ref|ZP_13285548.1| AMP-binding enzyme [Leptospira interrogans str. UI 12621]
gi|418730735|ref|ZP_13289211.1| AMP-binding enzyme [Leptospira interrogans str. UI 12758]
gi|421117442|ref|ZP_15577805.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|421123073|ref|ZP_15583355.1| AMP-binding enzyme [Leptospira interrogans str. Brem 329]
gi|400327456|gb|EJO79707.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|400361443|gb|EJP17409.1| AMP-binding enzyme [Leptospira interrogans str. FPW2026]
gi|409941197|gb|EKN86831.1| AMP-binding enzyme [Leptospira interrogans str. 2002000624]
gi|409947911|gb|EKN97905.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Pomona]
gi|409952016|gb|EKO06530.1| AMP-binding enzyme [Leptospira interrogans str. C10069]
gi|409959696|gb|EKO23462.1| AMP-binding enzyme [Leptospira interrogans str. UI 12621]
gi|410011153|gb|EKO69281.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410343817|gb|EKO95012.1| AMP-binding enzyme [Leptospira interrogans str. Brem 329]
gi|410575576|gb|EKQ38594.1| AMP-binding enzyme [Leptospira interrogans str. 2002000621]
gi|410578989|gb|EKQ46840.1| AMP-binding enzyme [Leptospira interrogans str. 2002000623]
gi|410754193|gb|EKR15848.1| AMP-binding enzyme [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|410762530|gb|EKR28691.1| AMP-binding enzyme [Leptospira interrogans serovar Bataviae str.
L1111]
gi|410764918|gb|EKR35620.1| AMP-binding enzyme [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|410772148|gb|EKR47342.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|410774297|gb|EKR54305.1| AMP-binding enzyme [Leptospira interrogans str. UI 12758]
gi|410790321|gb|EKR84015.1| AMP-binding enzyme [Leptospira interrogans str. UI 08452]
gi|455666916|gb|EMF32288.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str. Fox
32256]
gi|456824239|gb|EMF72676.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
LT1962]
Length = 683
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 180/497 (36%), Positives = 253/497 (50%), Gaps = 74/497 (14%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI-----RSLYDIVPAENGDKFLSM 72
+ E I +D+ T +YTSGTTG PKGVML H N++HQ+ L +I P D LS+
Sbjct: 171 RIEEIKPEDLFTLIYTSGTTGMPKGVMLMHSNMIHQMVYVVPMLLTEIKPT---DSMLSI 227
Query: 73 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
LP WH++ER Y S GI+ YT V +L++DL + +P +M S P V+E +Y+ I ++
Sbjct: 228 LPIWHIFERINEYGAISSGIQTYYTKVADLRNDLAKAKPSFMASAPRVWENVYANIYNKV 287
Query: 133 FTSSAA---RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ------------------ 171
RRV+ + S Y A +R G + +
Sbjct: 288 NDPKQTPPIRRVLFKLAYFFSKHYNASRRFLNGLEVDYENRNIMKSLVIGIRSLIVLLLT 347
Query: 172 ----------------PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-K 214
P Y + L +WL+ ++ L + +V KI++A G K
Sbjct: 348 GPFTLSAISILAYLTLPVYGIHLPNWLFFSLVGLGLVFNAKTLDTIVLSKIRAATGGRLK 407
Query: 215 AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 274
A +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+
Sbjct: 408 ASLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELI 467
Query: 275 IVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
I D N EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTG
Sbjct: 468 IKDENGNVLTHINDQYEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTG 526
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
DIG+I L L GRAKDT+VL GENVEP+ +E S I+Q +VI
Sbjct: 527 DIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVI 576
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF- 440
GQDQ+ GAIIVPD E + + K I + E+ K K I E+R + S K F
Sbjct: 577 GQDQKVLGAIIVPDMEHLGVWCKENGIDSSKIDEIIKNPKVIDFYKKEVRSYNSTKTGFK 636
Query: 441 ---QIGPIHVVDEPFTV 454
Q+ + + +PF V
Sbjct: 637 SFEQVQHVILAKKPFEV 653
>gi|456973085|gb|EMG13345.1| AMP-binding enzyme domain protein [Leptospira interrogans serovar
Grippotyphosa str. LT2186]
Length = 568
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 178/494 (36%), Positives = 253/494 (51%), Gaps = 68/494 (13%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE--NGDKFLSMLPP 75
+ E I +D+ T +YTSGTTG PKGVML H N++HQ+ + ++ E D LS+LP
Sbjct: 56 RIEEIKPEDLFTLIYTSGTTGMPKGVMLMHSNMIHQMVYVVPMLLTEIKPTDSMLSILPI 115
Query: 76 WHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 135
WH++ER Y S GI+ YT V +L++DL + +P +M S P V+E +Y+ I ++
Sbjct: 116 WHIFERINEYGAISSGIQTYYTKVADLRNDLAKAKPSFMASAPRVWENVYANIYNKVNDP 175
Query: 136 SAA---RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ--------------------- 171
RRV+ + S Y A +R G + +
Sbjct: 176 KQTPPIRRVLFKLAYFFSKHYNASRRFLNGLEVDYENRNIMKSLVIGIRSLIVLLLTGPF 235
Query: 172 -------------PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGV 217
P Y + L +WL+ ++ L + +V KI++A G KA +
Sbjct: 236 TLSAISILAYLTLPVYGIHLPNWLFFSLVGLGLVFNAKTLDTIVLSKIRAATGGRLKASL 295
Query: 218 SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD 277
SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I D
Sbjct: 296 SGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELIIKD 355
Query: 278 AETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG 326
N EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTGDIG
Sbjct: 356 ENGNVLTHINDQYEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTGDIG 414
Query: 327 WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD 386
+I L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQD
Sbjct: 415 FI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQD 464
Query: 387 QRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF---- 440
Q+ GAIIVPD E + + K I + E+ K K I E+R + S K F
Sbjct: 465 QKVLGAIIVPDMEHLGVWCKENGIDSSKIDEIIKNPKVIDFYKKEVRSYNSTKTGFKSFE 524
Query: 441 QIGPIHVVDEPFTV 454
Q+ + + +PF V
Sbjct: 525 QVQHVILAKKPFEV 538
>gi|226320819|ref|ZP_03796372.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 29805]
gi|226233761|gb|EEH32489.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 29805]
Length = 645
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 159/441 (36%), Positives = 255/441 (57%), Gaps = 24/441 (5%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERA 82
S DIAT +YTSGTTG PKGVML H++ + Q+ LYD +P + G +S+LP WH +ERA
Sbjct: 182 SKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRLYDYLPTLKPGKIMISILPLWHSFERA 241
Query: 83 CGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
C Y + +GI + Y+ L D P ++SVP ++E + GI K++ + S ++
Sbjct: 242 CEYIVALKGIAIAYSKPIGPVLLKDFLLLNPQMIVSVPRIWEGIRIGIIKKV-SESFIKK 300
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
V +++ Y K + G L+ K+ ++L++L L+ I +++P+ LL +
Sbjct: 301 FVFGGFLKVGIIYAKLKERFLG--LSPIYKKTNFLISLFSKLFLFIGIVLIFPIKLLGDI 358
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LV+KKI++A+G + + GVSGGG+L ++D F++A+G+KV GYGLTE+ P+++ RR
Sbjct: 359 LVFKKIKNALGQNFEFGVSGGGALVDYVDYFFKAVGIKVLEGYGLTETGPILSVRRLKGP 418
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
V +VG + E K+V + VLP G KG + VR Q+M GYFK+ + T + L EDGW
Sbjct: 419 VAKTVGPILPDVEYKVVGID-GRVLPYGEKGELWVRSPQIMSGYFKDKAKTSEVLTEDGW 477
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
NTGD+ + ++ + + GR+KDTIVL GEN+EP LE +S I
Sbjct: 478 FNTGDLVRLTINNE----------ISIVGRSKDTIVLRGGENIEPEPLERVLGKSLFIEN 527
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT--SK 437
I+++GQDQ+ GA+I P+ + + A + + S+L + ++ LY + T +K
Sbjct: 528 IMIVGQDQKFLGAVIAPNFDNLEKWANSSGVSFSSRSDLLANEDVNKLYSKHISDTINTK 587
Query: 438 CSF----QIGPIHVVDEPFTV 454
F +I ++ +PFT+
Sbjct: 588 LGFKNFEKIVGFVLLQDPFTI 608
>gi|257456081|ref|ZP_05621284.1| AMP-binding enzyme family protein [Treponema vincentii ATCC 35580]
gi|257446539|gb|EEV21579.1| AMP-binding enzyme family protein [Treponema vincentii ATCC 35580]
Length = 640
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 157/414 (37%), Positives = 231/414 (55%), Gaps = 28/414 (6%)
Query: 23 GSD-DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
G+D ++AT ++TSGTTG PKGVMLTHKN Q+ L V G+K + +LP WH +ER
Sbjct: 186 GADTEVATIIFTSGTTGEPKGVMLTHKNFAVQLDDLKTRVILHPGEKAIVVLPVWHSFER 245
Query: 82 ACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
C Y I + ++Y+ L D+ + P SVP ++E++Y+G+ K + + +
Sbjct: 246 LCEYVILASAAGMVYSKPVGSILLADIAKTNPALFPSVPRIWESVYTGVFKAMKQAGGIK 305
Query: 140 RVVARALIRISFAYTAFKRIYEG----FCLTRNQKQPSYLVALIDWLWARIICAILWPLH 195
+ + + + + R G F +P +++ I +L + P +
Sbjct: 306 QKLFSFFVAVGLFHAHHARNVRGQNPHFAFYTKITRP--IISFIPFLLSA-------PFY 356
Query: 196 LLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
L LV+KKI++ +G + GVSGGG+LP +ID F+ AIGV V GYGLTE++PV++ R
Sbjct: 357 ALGNVLVFKKIRTKLGTGFRQGVSGGGALPPNIDAFFWAIGVSVTEGYGLTETAPVVSVR 416
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
V G++G P++ T++KIVD NE LPAG G V +RG+ VM+GY+K T +
Sbjct: 417 PLGHPVFGTIGKPLSCTKVKIVDDSGNE-LPAGKLGTVMIRGTSVMKGYYKRQDLTDAVI 475
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
D+DGW ++GD+G + G L+L GR KDTIVL GEN+EP+ +E S
Sbjct: 476 DKDGWFDSGDLGM----------KTIDGELILRGRKKDTIVLRGGENIEPVPIEMKLQES 525
Query: 375 SLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
I Q VV+GQDQR GA+IV D+ EV A I A EL + I L+
Sbjct: 526 PFIAQAVVLGQDQRFLGALIVADEAEVKNYAAEQGISAASFEELLAKPEIKKLF 579
>gi|398340726|ref|ZP_10525429.1| long-chain-fatty-acid CoA ligase [Leptospira kirschneri serovar Bim
str. 1051]
gi|418678481|ref|ZP_13239755.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|421088407|ref|ZP_15549232.1| AMP-binding enzyme [Leptospira kirschneri str. 200802841]
gi|421129505|ref|ZP_15589705.1| AMP-binding enzyme [Leptospira kirschneri str. 2008720114]
gi|400321671|gb|EJO69531.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|410003038|gb|EKO53487.1| AMP-binding enzyme [Leptospira kirschneri str. 200802841]
gi|410358880|gb|EKP05989.1| AMP-binding enzyme [Leptospira kirschneri str. 2008720114]
Length = 683
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 182/499 (36%), Positives = 257/499 (51%), Gaps = 78/499 (15%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS-----LYDIVPAENGDKFLSM 72
+ E I +D+ T +YTSGTTG PKGVML H N++HQ+ L DI P D LS+
Sbjct: 171 RIEEIKPEDLFTLIYTSGTTGMPKGVMLMHSNMIHQMVHVVPMLLTDIKPT---DSMLSI 227
Query: 73 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
LP WH++ER Y S GI+ YT V +L++DL + +P +M S P V+E +Y+ I ++
Sbjct: 228 LPIWHIFERVNEYGAISSGIQTYYTKVADLRNDLAKAKPSFMASAPRVWENVYANIYNKV 287
Query: 133 FT---SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICA 189
+ RR++ + S Y A +R G L + + + L +L+ + + II
Sbjct: 288 NDPKQTPTIRRILFKLAYFFSKHYNASRRFLNG--LEVDYENRNILKSLVIGIKSLIILL 345
Query: 190 ILWPLHLLA------------------------------------EKLVYKKIQSAIGIS 213
+ P L A + +V KI++A G
Sbjct: 346 LTGPFTLSAISILAYLTIPVYGAHLPNWIFFSLAGLGLVFNAKTLDTIVLSKIRAATGGR 405
Query: 214 -KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTE 272
KA +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E
Sbjct: 406 LKASLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSE 465
Query: 273 IKIVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
+ I D N EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+N
Sbjct: 466 LIIKDENGNVLTHINDQFEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMN 524
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGDIG+I L L GRAKDT+VL GENVEP+ +E S I+Q +
Sbjct: 525 TGDIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSM 574
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCS 439
VIGQDQ+ GAIIVPD E + + K I + E+ K K I E+R + S K
Sbjct: 575 VIGQDQKVLGAIIVPDIEHLSVWCKENGIDPSKTDEIIKNPKVIDFYKKEVRNYNSTKTG 634
Query: 440 F----QIGPIHVVDEPFTV 454
F Q+ + + +PF V
Sbjct: 635 FKSFEQVQHVILAKKPFEV 653
>gi|410679373|ref|YP_006931775.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii HLJ01]
gi|408536761|gb|AFU74892.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii HLJ01]
Length = 651
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 152/411 (36%), Positives = 238/411 (57%), Gaps = 18/411 (4%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERA 82
S DIAT +YTSGTTG PKGVML H++ + Q+ LYD +P + G +S+LP WH +ERA
Sbjct: 188 SKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRLYDYLPTLKPGKIMISILPLWHSFERA 247
Query: 83 CGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
C Y + +GI + Y+ L D P +ISVP ++E + GI K++ + S ++
Sbjct: 248 CEYIVALKGIAIAYSKPIGPVLLKDFLLLNPQMIISVPRIWEGIRIGIIKKV-SESLIKK 306
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
++ +RI Y K GF K+P+ ++L ++ + ++ P+ LL +
Sbjct: 307 LMFGGFLRIGIVYAKLKEKILGFSPV--YKKPNLFISLFSKIFLFVGIVLILPIKLLGDI 364
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LV+KKI+ A+G + + GVSGGG+L ++D F++A+G+KV GYGLTE+ P+++ RR
Sbjct: 365 LVFKKIKKALGQNFEFGVSGGGALVDYVDYFFKAVGIKVLEGYGLTETGPILSVRRLKGP 424
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
V +VG + E K+V + +VL G KG + VR Q+M GYFK+ + T + L EDGW
Sbjct: 425 VARTVGPILPDVEYKVVGVD-GKVLSYGEKGELWVRSPQIMSGYFKDKAKTSEVLTEDGW 483
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
NTGD+ + ++ + + GR+KDTIVL GEN+EP LE +S I
Sbjct: 484 FNTGDLVRLTINNE----------ISIVGRSKDTIVLRGGENIEPEPLERVLGKSLFIEN 533
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
I+++GQDQ+ GAIIVP+ + + A + + +L + ++ LY +
Sbjct: 534 IMIVGQDQKFLGAIIVPNFDNLEKWANSSGVSFSSRGDLLANEDVNKLYSK 584
>gi|111115421|ref|YP_710039.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii PKo]
gi|384207081|ref|YP_005592803.1| AMP-binding protein [Borrelia afzelii PKo]
gi|110890695|gb|ABH01863.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii PKo]
gi|342856965|gb|AEL69813.1| AMP-binding enzyme family protein [Borrelia afzelii PKo]
Length = 645
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 152/411 (36%), Positives = 238/411 (57%), Gaps = 18/411 (4%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERA 82
S DIAT +YTSGTTG PKGVML H++ + Q+ LYD +P + G +S+LP WH +ERA
Sbjct: 182 SKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRLYDYLPTLKPGKIMISILPLWHSFERA 241
Query: 83 CGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
C Y + +GI + Y+ L D P +ISVP ++E + GI K++ + S ++
Sbjct: 242 CEYIVALKGIAIAYSKPIGPVLLKDFLLLNPQMIISVPRIWEGIRIGIIKKV-SESLIKK 300
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
++ +RI Y K GF K+P+ ++L ++ + ++ P+ LL +
Sbjct: 301 LMFGGFLRIGIVYAKLKEKILGFSPV--YKKPNLFISLFSKIFLFVGIVLILPIKLLGDI 358
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LV+KKI+ A+G + + GVSGGG+L ++D F++A+G+KV GYGLTE+ P+++ RR
Sbjct: 359 LVFKKIKKALGQNFEFGVSGGGALVDYVDYFFKAVGIKVLEGYGLTETGPILSVRRLKGP 418
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
V +VG + E K+V + +VL G KG + VR Q+M GYFK+ + T + L EDGW
Sbjct: 419 VARTVGPILPDVEYKVVGVD-GKVLSYGEKGELWVRSPQIMSGYFKDKAKTSEVLTEDGW 477
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
NTGD+ + ++ + + GR+KDTIVL GEN+EP LE +S I
Sbjct: 478 FNTGDLVRLTINNE----------ISIVGRSKDTIVLRGGENIEPEPLERVLGKSLFIEN 527
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
I+++GQDQ+ GAIIVP+ + + A + + +L + ++ LY +
Sbjct: 528 IMIVGQDQKFLGAIIVPNFDNLEKWANSSGVSFSSRGDLLANEDVNKLYSK 578
>gi|408794088|ref|ZP_11205693.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408461323|gb|EKJ85053.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 650
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 154/389 (39%), Positives = 226/389 (58%), Gaps = 30/389 (7%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENG--DKFLSMLPP 75
+ + I DD+ T +YTSGTTG PKGVMLTH N++ Q+R+ +P E G D+FLS+LP
Sbjct: 194 RVQAIQPDDLFTIIYTSGTTGEPKGVMLTHANMISQLRN----IPIEIGPKDRFLSILPV 249
Query: 76 WHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 135
WH +ER + G YT VRN+++DL +P +M S P ++E++Y GIQ +I T
Sbjct: 250 WHSFERVFQMGTIAVGATQYYTNVRNIREDLLIVKPTFMASAPRLWESIYQGIQSKIQTG 309
Query: 136 SAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC----AIL 191
S ++V+ + AY +I + + Y L + II +L
Sbjct: 310 SIMKKVLFK------LAYGCALQIQSSIQFLKGNRLDLYGRNLFQSITLGIISLVSITVL 363
Query: 192 WPLHLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
+ + + +V K++ A G G VSGGGSLP HID F+ I + V GYGLTE+SP
Sbjct: 364 FVPFFILDLIVLSKLRHATGGKLRGTVSGGGSLPFHIDEFFNTIRIPVFEGYGLTETSPG 423
Query: 251 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL---PAGSKGIVKVRGSQVMQGYFKNP 307
+A R V+GSVG TEI + D ET V+ G KG + VRG Q+M+GY+K P
Sbjct: 424 LAFRTAKHLVVGSVGPIFPGTEILLKDIETGVVIYPPKKGIKGEIYVRGPQIMKGYYKRP 483
Query: 308 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 367
AT + L +DGWLNTGD+G + +++ L + GR K+T+VL GEN+EP+ +
Sbjct: 484 EATSKVLSDDGWLNTGDLGVMTFNNT----------LKIVGRTKETVVLLNGENIEPVPI 533
Query: 368 EEAALRSSLIRQIVVIGQDQRRPGAIIVP 396
E ++S+LI Q++++GQDQ+ GA+I+P
Sbjct: 534 ENKLIQSTLIEQVMIVGQDQKYLGALILP 562
>gi|421099382|ref|ZP_15560036.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200901122]
gi|410797584|gb|EKR99689.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200901122]
Length = 683
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 180/495 (36%), Positives = 247/495 (49%), Gaps = 74/495 (14%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS-----LYDIVPAENGDKFLSMLP 74
E I +D+ T +YTSGTTG PKGVML H N++HQ+ L D P D LS+LP
Sbjct: 173 EEIKPEDLFTLIYTSGTTGMPKGVMLMHSNMVHQMVHVVPMLLTDTKPT---DSMLSILP 229
Query: 75 PWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 134
WH++ER Y SRGI+ YT V +LK+DL + +P +M S P V+E +Y+ I ++
Sbjct: 230 IWHIFERVNEYGAISRGIQTYYTKVSDLKNDLTKAKPSFMGSAPRVWENVYTNIYNKVND 289
Query: 135 SSAA---RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ-------------------- 171
R+ + + S Y A +R G + +
Sbjct: 290 PKQTPPLRKFLFKLAYFFSKHYNASRRFLNGLEVDYENRNILKSIAIGTKSLIVLLLTGP 349
Query: 172 --------------PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAG 216
P+Y V L W + I L + +V KI++A G K
Sbjct: 350 FTLSAMAILAYLALPTYGVRLPSWFFFMIAGLGLVFNAKTLDAVVLSKIRAATGGRLKGS 409
Query: 217 VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIV 276
+SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I
Sbjct: 410 LSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFAKPIIGSVGFLVPKSELMIK 469
Query: 277 DAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 325
D N EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTGDI
Sbjct: 470 DENGNVLTHINDKFEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTGDI 528
Query: 326 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 385
G+I L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQ
Sbjct: 529 GFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQ 578
Query: 386 DQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF--- 440
D++ GAIIVPD E + K I + EL K K I E+R + S K F
Sbjct: 579 DKKVLGAIIVPDMEHLTFWCKENGIDSSKIDELIKNPKVIEFYKKEVRNYNSTKTGFKSF 638
Query: 441 -QIGPIHVVDEPFTV 454
Q+ + + +PF V
Sbjct: 639 EQVQHVILAKKPFEV 653
>gi|418693568|ref|ZP_13254618.1| AMP-binding enzyme [Leptospira kirschneri str. H1]
gi|421106608|ref|ZP_15567172.1| AMP-binding enzyme [Leptospira kirschneri str. H2]
gi|409958594|gb|EKO17485.1| AMP-binding enzyme [Leptospira kirschneri str. H1]
gi|410008074|gb|EKO61749.1| AMP-binding enzyme [Leptospira kirschneri str. H2]
Length = 683
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 179/497 (36%), Positives = 252/497 (50%), Gaps = 74/497 (14%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS-----LYDIVPAENGDKFLSM 72
+ E I +D+ T +YTSGTTG PKGVML H N++HQ+ L DI P D LS+
Sbjct: 171 RIEEIKPEDLFTLIYTSGTTGMPKGVMLMHSNMIHQMVHVVPMLLTDIKPT---DSMLSI 227
Query: 73 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
LP WH++ER Y S GI+ YT V +L++DL + +P +M S P V+E +Y+ I ++
Sbjct: 228 LPIWHIFERVNEYGAISSGIQTYYTKVADLRNDLAKAKPSFMASAPRVWENVYANIYNKV 287
Query: 133 FT---SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ------------------ 171
+ RR++ + S Y A +R G + +
Sbjct: 288 NDPKQTPTIRRILFKLAYFFSKHYNASRRFLNGLEVDYENRNIFKSLVIGIKSLIILLLT 347
Query: 172 ----------------PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-K 214
P Y L +W++ + L + +V KI++A G K
Sbjct: 348 GPFTLSAISILAYLTLPVYGARLPNWIFFSLAGLGLVFNAKTLDTIVLSKIRAATGGRLK 407
Query: 215 AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 274
A +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+
Sbjct: 408 ASLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELI 467
Query: 275 IVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
I D N EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTG
Sbjct: 468 IKDENGNVLTHINDQFEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTG 526
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
DIG+I L L GRAKDT+VL GENVEP+ +E S I+Q +VI
Sbjct: 527 DIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVI 576
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF- 440
GQDQ+ GAIIVPD E + + K I + E+ K K I E+R + S K F
Sbjct: 577 GQDQKVLGAIIVPDIEHLSVWCKENGIDPSKTDEIIKNPKVIDFYKKEVRNYNSTKTGFK 636
Query: 441 ---QIGPIHVVDEPFTV 454
Q+ + + +PF V
Sbjct: 637 SFEQVQHVILAKKPFEV 653
>gi|384108995|ref|ZP_10009881.1| Long-chain acyl-CoA synthetase (AMP-forming) [Treponema sp. JC4]
gi|383869439|gb|EID85052.1| Long-chain acyl-CoA synthetase (AMP-forming) [Treponema sp. JC4]
Length = 643
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 152/441 (34%), Positives = 250/441 (56%), Gaps = 29/441 (6%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+D+AT ++TSGTTG PKGVMLTHKN L Q+ + + + GD+ LS+LP WHV+ER
Sbjct: 190 EDLATIIFTSGTTGTPKGVMLTHKNFLAQLDEIPERIYINPGDRALSVLPVWHVFEREVE 249
Query: 85 YFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y I +G + Y+ L D ++ PH + +VP V+E +Y G+ K++ + +
Sbjct: 250 YVILIQGGAICYSKPIGSILLADFKKLNPHLLPAVPRVFEAVYDGVTKKMRKTGGLVLKL 309
Query: 143 ARALIRISFAYTAFKR--IYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+ ++ + A +R + C T + +++ ++ W +++WPL+ L +
Sbjct: 310 FNFFVGVAKIHKAMQRKMFNQNPCFTAYRPVLWWILFILPW-------SLMWPLYWLGDL 362
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
L+++KI+ +G + + G++GGG+ P +ID F+ AIGV++ GYGLTE++P++A R
Sbjct: 363 LIFRKIKVMLGSNFRVGIAGGGAYPKNIDEFFWAIGVEIVEGYGLTETAPIVAVRPIAAP 422
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
+ ++G PI + +IVD + VL G +GI++++G VM+GY+K P T++ + DGW
Sbjct: 423 IYRTIGSPIRGVQARIVDMD-GYVLERGQQGILQIKGPTVMKGYYKRPDLTEKVMTVDGW 481
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
L+TGD+ H+ L ++GR KDTIVL GEN+EPL +E S I+Q
Sbjct: 482 LDTGDLAVFTIHNE----------LQIKGRIKDTIVLRGGENLEPLPIEMKLSESRFIKQ 531
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKW-TSK 437
VV+GQD+R A+I+ D++E+ A I + L I LY GE+ +SK
Sbjct: 532 AVVLGQDKRYLAALILVDEDEIKNYAAENGIQYDTYENLLASNGIQSLYEGEIANLISSK 591
Query: 438 CSFQ----IGPIHVVDEPFTV 454
F+ I ++ +PF V
Sbjct: 592 NGFKMFERINKFTLITKPFEV 612
>gi|421087474|ref|ZP_15548310.1| AMP-binding enzyme [Leptospira santarosai str. HAI1594]
gi|421104138|ref|ZP_15564733.1| AMP-binding enzyme [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410365590|gb|EKP20983.1| AMP-binding enzyme [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410429723|gb|EKP74098.1| AMP-binding enzyme [Leptospira santarosai str. HAI1594]
Length = 683
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 179/497 (36%), Positives = 252/497 (50%), Gaps = 74/497 (14%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI-----RSLYDIVPAENGDKFLSM 72
+ E I +D+ T +YTSGTTG PKGVML H N++HQ+ L +I P D LS+
Sbjct: 171 RIEEIKPEDLFTLIYTSGTTGMPKGVMLMHSNMIHQMVYVVPMLLTEIKPT---DSMLSI 227
Query: 73 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
LP WH++ER Y S GI+ YT V +L++DL + +P +M P V+E +Y+ I ++
Sbjct: 228 LPIWHIFERINEYGAISSGIQTYYTKVADLRNDLAKAKPSFMAFAPRVWENVYANIYNKV 287
Query: 133 FTSSAA---RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ------------------ 171
RRV+ + S Y A +R G + +
Sbjct: 288 NDPKQTPPIRRVLFKLAYFFSKHYNASRRFLNGLEVDYENRNIMKSLVIGIRSLIVLLLT 347
Query: 172 ----------------PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-K 214
P Y + L +WL+ ++ L + +V KI++A G K
Sbjct: 348 GPFTLSAISILAYLTLPVYGIHLPNWLFFSLVGLGLVFNAKTLDTIVLSKIRAATGGRLK 407
Query: 215 AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 274
A +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+
Sbjct: 408 ASLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELI 467
Query: 275 IVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
I D N EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTG
Sbjct: 468 IKDENGNVLTHINDQYEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTG 526
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
DIG+I L L GRAKDT+VL GENVEP+ +E S I+Q +VI
Sbjct: 527 DIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVI 576
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF- 440
GQDQ+ GAIIVPD E + + K I + E+ K K I E+R + S K F
Sbjct: 577 GQDQKVLGAIIVPDMEHLGVWCKENGIDSSKIDEIIKNPKVIDFYKKEVRSYNSTKTGFK 636
Query: 441 ---QIGPIHVVDEPFTV 454
Q+ + + +PF V
Sbjct: 637 SFEQVQHVILAKKPFEV 653
>gi|45656005|ref|YP_000091.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45599238|gb|AAS68728.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 685
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 179/497 (36%), Positives = 252/497 (50%), Gaps = 74/497 (14%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI-----RSLYDIVPAENGDKFLSM 72
+ E I +D+ T +YTSGTTG PKGVML H N++HQ+ L +I P D LS+
Sbjct: 173 RIEEIKPEDLFTLIYTSGTTGMPKGVMLMHSNMIHQMVYVVPMLLTEIKPT---DSMLSI 229
Query: 73 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
LP WH++ER Y S GI+ YT V +L++DL + +P +M P V+E +Y+ I ++
Sbjct: 230 LPIWHIFERINEYGAISSGIQTYYTKVADLRNDLAKAKPSFMAFAPRVWENVYANIYNKV 289
Query: 133 FTSSAA---RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ------------------ 171
RRV+ + S Y A +R G + +
Sbjct: 290 NDPKQTPPIRRVLFKLAYFFSKHYNASRRFLNGLEVDYENRNIMKSLVIGIRSLIVLLLT 349
Query: 172 ----------------PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-K 214
P Y + L +WL+ ++ L + +V KI++A G K
Sbjct: 350 GPFTLSAISILAYLTLPVYGIHLPNWLFFSLVGLGLVFNAKTLDTIVLSKIRAATGGRLK 409
Query: 215 AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 274
A +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+
Sbjct: 410 ASLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELI 469
Query: 275 IVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
I D N EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTG
Sbjct: 470 IKDENGNVLTHINDQYEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTG 528
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
DIG+I L L GRAKDT+VL GENVEP+ +E S I+Q +VI
Sbjct: 529 DIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVI 578
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF- 440
GQDQ+ GAIIVPD E + + K I + E+ K K I E+R + S K F
Sbjct: 579 GQDQKVLGAIIVPDMEHLGVWCKENGIDSSKIDEIIKNPKVIDFYKKEVRSYNSTKTGFK 638
Query: 441 ---QIGPIHVVDEPFTV 454
Q+ + + +PF V
Sbjct: 639 SFEQVQHVILAKKPFEV 655
>gi|392403501|ref|YP_006440113.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
gi|390611455|gb|AFM12607.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
Length = 645
Score = 261 bits (666), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 163/447 (36%), Positives = 257/447 (57%), Gaps = 35/447 (7%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+ D++ VYTSGTTG PKGVML+H N Q+R++ +++ D L++LPPWHV+ R
Sbjct: 185 VAPSDLSCLVYTSGTTGEPKGVMLSHGNFASQMRTIPEVLKIGPTDSGLTLLPPWHVFGR 244
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
+ G + YT ++++ DD++ +P Y+ +VP ++E +Y+ I + A +
Sbjct: 245 ITEMMFIAIGASITYTDIKHIGDDMRSIKPTYVPAVPRIWEGIYNKIIGNV--KKAGKEP 302
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQP--SYLVALIDWLWARIICAILWPL-HLLA 198
+ + Y F + LT +K P +V+ I + AI+W + L
Sbjct: 303 IFNKFKAAALKYNHFVSM-----LTGKEKLPIGRNIVSAIGARIVGLFGAIVWFIPKKLG 357
Query: 199 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+ LV+KK+ +A G + KA +SGGG+LP +ID F+ AIGV++ GYGLTE+SPV++ RR
Sbjct: 358 DILVFKKVLAATGGNLKASLSGGGALPSYIDDFFRAIGVRILEGYGLTETSPVLSVRRME 417
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEV--LPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
+ G+VG I HTE K++D E +V +P G+KG + VRG QVMQGY+KNP T L
Sbjct: 418 RLIPGTVGPLIAHTEYKLIDLEGRDVTRIP-GAKGTLHVRGPQVMQGYYKNPKKTADVLT 476
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
DGW NTGD+ + +HS G + + GR+KDT+VL GENVEP +EE S
Sbjct: 477 PDGWFNTGDL--VVFNHS--------GEISIVGRSKDTLVLVGGENVEPTPIEEKMKESE 526
Query: 376 LIRQIVVI----GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GE 430
I ++++ G+DQ+ GA+IVP+ + + AK+ + V D + L K+ + +Y E
Sbjct: 527 FIDHVMLVSRAFGEDQKVLGALIVPNADNLADWAKK-NGVSGDFAALIKDPKVHAMYRHE 585
Query: 431 LRKW-TSKCSF----QIGPIHVVDEPF 452
+ K+ S+ F ++G ++ +PF
Sbjct: 586 INKYINSENGFKNFEKVGVFTLLKKPF 612
>gi|374812610|ref|ZP_09716347.1| AMP-binding domain-containing protein [Treponema primitia ZAS-1]
Length = 636
Score = 260 bits (665), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 155/440 (35%), Positives = 247/440 (56%), Gaps = 29/440 (6%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 83
+D+AT ++TSGTTG PKGVML+H N L Q S + + GD +LS+LP WHV+ER+
Sbjct: 184 EEDLATIIFTSGTTGEPKGVMLSHNNFLVQQPSWRLVFEVKTGDIWLSVLPVWHVFERSI 243
Query: 84 GYFIF--SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y IF + GI L D Q +PH+M+SVP V+E++ + + +
Sbjct: 244 EYIIFYLNSGIAYSKPVSSILLADFQSIRPHWMVSVPRVWESIMDWSNRHVKKQGWIFKN 303
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSY--LVALIDWLWARIICAILWPLHLLAE 199
+ + Y F+ + G + P++ V L D+ + +L P+ L
Sbjct: 304 GFEFFMTVGIMYNYFRDLTFG-------RIPNFHGRVRLFDFFMGILPLILLCPVQCLTA 356
Query: 200 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
+V++ I+ +G KAG+SGGG+LP+ +DLF+ AIG+++Q GYGLTE++P++AARR
Sbjct: 357 LIVFQPIKKRLGGRFKAGLSGGGALPLKVDLFFNAIGIRLQEGYGLTEAAPIVAARRYKA 416
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
+VG + +TE +IVD +T +LP G G ++VRG QVMQGY++ P T +AL DG
Sbjct: 417 PRRTTVGQLLLNTEARIVD-DTGTILPPGHNGHLQVRGGQVMQGYYRKPELTAKALSPDG 475
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
WL TGDI + + + + GRAKDTIVL GENVEP+ +E S +
Sbjct: 476 WLETGDIAMMTYDNE----------VRITGRAKDTIVLLGGENVEPVPIENKIRESPWVS 525
Query: 379 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS-LLYGELRKWTS- 436
+++GQ+Q+ A++VP +E +++ A+ +I D L ++ I+ L+ E+ + S
Sbjct: 526 HCMIVGQNQKYIAALVVPVQEALMIFAEENNIPIVDYESLLQQAEINELISNEVSRLVSA 585
Query: 437 ----KCSFQIGPIHVVDEPF 452
K ++ + ++ +PF
Sbjct: 586 QAGFKTYERVFKLKLIPKPF 605
>gi|374317585|ref|YP_005064013.1| AMP-forming long-chain acyl-CoA synthetase [Sphaerochaeta
pleomorpha str. Grapes]
gi|359353229|gb|AEV31003.1| AMP-forming long-chain acyl-CoA synthetase [Sphaerochaeta
pleomorpha str. Grapes]
Length = 639
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 162/410 (39%), Positives = 236/410 (57%), Gaps = 22/410 (5%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERAC 83
D++AT ++TSGTTG+PKGV+LTH+N Q+ L I+ G ++LS+LP WH +ER
Sbjct: 189 DEVATVIFTSGTTGDPKGVVLTHENFAFQLEELPKIITRFAPGQRWLSVLPVWHSFERIL 248
Query: 84 GYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y I S+ + Y+ L DLQ PH+M SVP ++E + +G+ + S +
Sbjct: 249 QYTIVSQASAIAYSKPLGSILLADLQAVNPHWMGSVPRIWEAVKAGVFGSMKNKSPVSQK 308
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
+ + + ++ Y K + G + ++ ID L + + +L+PL+ L + L
Sbjct: 309 LFKFFVSVANLYDTNKDLLVGDVPSFKKRN-----RFIDVLRSFLPTVLLFPLYKLGDHL 363
Query: 202 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
VY K++ +G + AGVSGGGSL +D F+ +IG+K+ GYGLTESSPVIA R ++
Sbjct: 364 VYAKVKEKLGKNFLAGVSGGGSLSESVDRFFSSIGIKLLDGYGLTESSPVIAVRYFDHSI 423
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
+V P+ +TE+KIVD N V P G KG++ VRG QVM+GY+K P T + L DGWL
Sbjct: 424 KRTVS-PLGNTEVKIVDENGNSVAP-GVKGLLMVRGKQVMKGYYKRPDLTAKVLSPDGWL 481
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
NTGD+G I H G + GRAKDTIVLS GEN+EP+ +E +I Q
Sbjct: 482 NTGDLG-IWTHD---------GQFSIAGRAKDTIVLSGGENLEPVPIEAKLCECEMIEQA 531
Query: 381 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
VV+GQD + GA++V +K+ V I + S LSK K ++ L E
Sbjct: 532 VVVGQDMKYLGALVVLNKKLVEEYLTEQHIPYLSDS-LSKMKEVNELIAE 580
>gi|456863005|gb|EMF81517.1| AMP-binding enzyme [Leptospira weilii serovar Topaz str. LT2116]
Length = 648
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 174/490 (35%), Positives = 259/490 (52%), Gaps = 70/490 (14%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I S+D+ T +YTSGTTG PKGVML H N++HQI+ + ++ + + LS+LP WHV+ER
Sbjct: 140 IDSEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFER 199
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 200 VVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPA 258
Query: 142 VARALIRISFAYTAFK----RIYEGFCLTRNQKQP--SYLVALIDWLWARI--------- 186
R L R+++ ++ K R +G + + P S+ ++ +L +
Sbjct: 259 FRRGLFRLAYFFSRKKNQALRFLKGIEVDYTGRNPIGSFFYGILMFLQFLLTGPFTLTVF 318
Query: 187 ---------------ICAILWPLHLLA--------EKLVYKKIQSAIGIS-KAGVSGGGS 222
+ + L+ + LA +K+V KI++A G KA +SGGG+
Sbjct: 319 AGVLGVYFAGTELYYLTSFLYVIAGLALLLNSFTLDKIVLAKIRAATGGQLKASISGGGA 378
Query: 223 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 282
LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I + + N
Sbjct: 379 LPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNA 437
Query: 283 VLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 330
VL G KG+V V+G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 438 VLTEMDENGKITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAI-TDGWMNTGDMGMINF 496
Query: 331 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 390
+ L L GRAKDTIVL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 497 KKT----------LTLTGRAKDTIVLLGGENVEPVPIENKLQESTYISQCMVIGQDQKNL 546
Query: 391 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGP 444
GAI+VPD E++ A+ I + +L + + LY + K +K F Q+ P
Sbjct: 547 GAIVVPDFEKLQEWAQENGINETNKDKLIENPKVYDLYRKEIKALNNTKNGFKSFEQVTP 606
Query: 445 IHVVDEPFTV 454
++ +PF V
Sbjct: 607 FILISKPFEV 616
>gi|398335373|ref|ZP_10520078.1| long-chain-fatty-acid--CoA ligase [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 635
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 150/396 (37%), Positives = 239/396 (60%), Gaps = 33/396 (8%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ + I +D+ T +YTSGTTGNPKGVMLTH+N+L QIR++ + + D+ LS+LP WH
Sbjct: 177 RADRIEPNDLLTLIYTSGTTGNPKGVMLTHENILSQIRNIP--LGLQKEDRILSILPVWH 234
Query: 78 VYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
++ER F+ G + YT +R+LK+D+Q +P +M S P ++E+++ GIQ ++
Sbjct: 235 IFERIFEIVSFTFGCKTYYTNIRSLKEDMQIVKPTFMASAPRLWESIFQGIQTKLQGMKG 294
Query: 138 ARRVVARALIRISFAYTAFKRI-YEGFCLTRNQK---QPSYL-VALIDWLWARIICA-IL 191
+++ + ++ + RI Y + +N++ P + V + L + II I+
Sbjct: 295 ISKILFQGALKTN-------RIRYRHLAVLKNRELKLNPEFWPVTIFKKLISFIILTWIV 347
Query: 192 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
P LL + +V KK++ A G + KA VSGGG+LP+H+D + AIG+ V GYGLTE+SP+
Sbjct: 348 LPAKLL-DLIVLKKVRMATGGNLKASVSGGGALPLHVDELFNAIGIPVLEGYGLTETSPI 406
Query: 251 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL-----PAGSKGIVKVRGSQVMQGYFK 305
++ R P ++G+VG T+++IVD T + + P G KG + V+G QVM+GY+K
Sbjct: 407 LSMRTPEELIVGTVGKIFPETQVRIVDVATGKNIYPSSNPFGKKGELIVKGPQVMKGYYK 466
Query: 306 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 365
N AT++ L +DGW TGD+ + L + GR K+TIVLS GEN+EP+
Sbjct: 467 NAEATEKVL-QDGWFKTGDLAVLT----------ANSYLKIVGRIKETIVLSNGENLEPV 515
Query: 366 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 401
+E S LI +V+GQD++ PG ++VP+ E +
Sbjct: 516 PIEAKLQESPLIEACMVVGQDKKFPGVLVVPNLENL 551
>gi|224531965|ref|ZP_03672597.1| long-chain-fatty-acid CoA ligase [Borrelia valaisiana VS116]
gi|224511430|gb|EEF81836.1| long-chain-fatty-acid CoA ligase [Borrelia valaisiana VS116]
Length = 645
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 151/411 (36%), Positives = 238/411 (57%), Gaps = 18/411 (4%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERA 82
S+DIAT +YTSGTTG PKGVML H++ + Q+ LYD +P + G +S+LP WH +ERA
Sbjct: 182 SEDIATIIYTSGTTGMPKGVMLRHESFIFQLDRLYDYLPTLKPGKIMISILPLWHSFERA 241
Query: 83 CGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
C Y + +GI + Y L D P +ISVP ++E + GI K++ + S ++
Sbjct: 242 CEYIVALKGIAIAYXKPIGPVLLKDFLLLNPQMIISVPRIWEGIRIGIIKKV-SESLIKK 300
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
++ ++ Y FK + GF K+ + + L L+ +++P+ LL +
Sbjct: 301 LMFGGFLKTGIVYEKFKEKFLGFSPV--YKKSNLFIVLFSKLFLFGGIILIFPVKLLGDI 358
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LV+KKI++A+G + + GVSGGG+L ++D F++A+G+KV GYGLTE+ P+++ RR
Sbjct: 359 LVFKKIKNALGKNFEFGVSGGGALVDYVDYFFKAVGIKVLEGYGLTETGPILSVRRLKGP 418
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
V +VG + E K+V + EVL G KG + VR Q+M GYFK+ + T + L EDGW
Sbjct: 419 VARTVGPILPDVEYKVVGID-GEVLSYGEKGELWVRSPQIMSGYFKDKAKTNEVLTEDGW 477
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
NTGD+ + ++ + + GR+KDTIVL GEN+EP LE +S I
Sbjct: 478 FNTGDLVKLTINNE----------ISIVGRSKDTIVLRGGENIEPEPLERVLSKSLFIEN 527
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
I+++GQDQ+ GA+IVP+ + + A + + +L + ++ LY +
Sbjct: 528 IMIVGQDQKFLGAVIVPNFDNLEKWANSSGVSFSSRDDLLINEEVNKLYSK 578
>gi|384107780|ref|ZP_10008678.1| Long-chain acyl-CoA synthetases (AMP-forming) [Treponema sp. JC4]
gi|383870636|gb|EID86238.1| Long-chain acyl-CoA synthetases (AMP-forming) [Treponema sp. JC4]
Length = 692
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 162/424 (38%), Positives = 233/424 (54%), Gaps = 27/424 (6%)
Query: 10 PVIAGKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKF 69
P I + + E I +D +A+ ++TSGTTG PKGV LTH N L Q+ +L +I D+
Sbjct: 203 PTIIDQQIR-EEISADQVASIIFTSGTTGVPKGVQLTHNNFLCQLPALSEIFDFHRADRS 261
Query: 70 LSMLPPWHVYERACGYFIFSRGIELMYT--AVRNLKDDLQRYQPHYMISVPLVYETLYSG 127
+ +LP WHVY+RA +++ L Y+ L D + +P M VP V+E G
Sbjct: 262 MCILPIWHVYQRAFEFYVMYFAGTLCYSKPVTSMLIQDFAKVRPQLMPCVPRVWE----G 317
Query: 128 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ--KQPSYLVALIDWLW-A 184
I + I + A L ++ +A EG R+ KQP+YL + LW
Sbjct: 318 IYQAISKKIKKQSKTAWLLFKLLSNASANALTLEGKIKGRHPLFKQPNYLQIGLSKLWYV 377
Query: 185 RIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVSGGGSLPMHIDLFYEAIGVKVQVGYG 243
+C L PL L KL +K I+ G A G+SGGG LP +D FY +IG++V YG
Sbjct: 378 PYVC--LLPLRALGNKLYFKNIREVTGGQFACGISGGGGLPPFLDRFYNSIGIRVVEAYG 435
Query: 244 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 303
LTE++PV+A+R+ V+G++G + + ++KI+D E + P G KGI+ V+G VM+GY
Sbjct: 436 LTETAPVVASRKRFAPVMGTIGQALPYNQVKILDTEGKPMAP-GQKGILYVKGENVMKGY 494
Query: 304 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 363
+K P T Q LD+DGW NTGD+ + G L+++GR KDTIVL +GENVE
Sbjct: 495 YKQPELTAQVLDQDGWFNTGDLAM----------QTVKGELMIKGRQKDTIVLKSGENVE 544
Query: 364 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKT 423
P +E S I +V+GQDQ GA+I+P E + AAK+ S H D E+ + T
Sbjct: 545 PFPIEAKLAESPYITTAIVVGQDQNSLGALIIPAVEAIRNAAKQGS--HPD-EEIKIDNT 601
Query: 424 ISLL 427
LL
Sbjct: 602 QKLL 605
>gi|410941204|ref|ZP_11373003.1| AMP-binding enzyme [Leptospira noguchii str. 2006001870]
gi|410783763|gb|EKR72755.1| AMP-binding enzyme [Leptospira noguchii str. 2006001870]
Length = 682
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 175/490 (35%), Positives = 260/490 (53%), Gaps = 70/490 (14%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I +D+ T +YTSGTTG PKGVML H N++HQ+ + ++ + G + LS+LP WHV+ER
Sbjct: 174 IHPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKVGARLLSILPIWHVFER 233
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 234 VVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPA 292
Query: 142 VARALIRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVAL 178
+ R L ++++ ++ K R +G + + P S+ L L
Sbjct: 293 LRRGLFKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVL 352
Query: 179 IDWLWARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGS 222
L A L+ PL++++ +K+V KI++A G KA +SGGG+
Sbjct: 353 ASALGAYFAGTELYFLTSPLYIVSGLALVLNSFTLDKIVLAKIRAATGGQLKASISGGGA 412
Query: 223 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 282
LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T+++I + + N
Sbjct: 413 LPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTKLQIRN-DNNA 471
Query: 283 VLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 330
VL G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 472 VLTEIDENGNIAQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIT-DGWMNTGDMGMINF 530
Query: 331 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 390
+ L L GRAKDTIVL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 531 KKT----------LTLTGRAKDTIVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNL 580
Query: 391 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGP 444
GAI+VPD E++ AK + + +L + I LY + K +K F Q+ P
Sbjct: 581 GAIVVPDFEKLQEWAKENGVNETNNEKLIENPKIYDLYRKEIKALNNTKNGFKSFEQVTP 640
Query: 445 IHVVDEPFTV 454
++ +PF V
Sbjct: 641 FILISKPFEV 650
>gi|359726629|ref|ZP_09265325.1| long-chain-fatty-acid--CoA ligase [Leptospira weilii str.
2006001855]
Length = 681
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 173/490 (35%), Positives = 259/490 (52%), Gaps = 70/490 (14%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I S+D+ T +YTSGTTG PKGVML H N++HQI+ + ++ + + LS+LP WHV+ER
Sbjct: 173 IDSEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFER 232
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 233 VVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPA 291
Query: 142 VARALIRISFAYTAFK----RIYEGFCLTRNQKQP--SYLVALIDWLWARI--------- 186
R L R+++ ++ K R +G + + P S+ ++ +L +
Sbjct: 292 FRRGLFRLAYFFSRKKNQALRFLKGIEVDYTGRNPIGSFFYGILMFLQFLLTGPFTLTVF 351
Query: 187 ---------------ICAILWPLHLLA--------EKLVYKKIQSAIGIS-KAGVSGGGS 222
+ + L+ + LA +K+V KI++A G KA +SGGG+
Sbjct: 352 AGVLGVYFAGTELYYLTSFLYVIAGLALLLNSFTLDKIVLAKIRAATGGQLKASISGGGA 411
Query: 223 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 282
LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I + + N
Sbjct: 412 LPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNA 470
Query: 283 VLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 330
VL G KG+V V+G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 471 VLTEMDENGKITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAI-TDGWMNTGDMGMINF 529
Query: 331 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 390
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 530 KKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQKNL 579
Query: 391 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGP 444
GAI+VPD E++ A+ I + +L + + LY + K +K F Q+ P
Sbjct: 580 GAIVVPDFEKLQEWAQENGISETNKDKLIENPKVYDLYRKEIKALNNTKNGFKSFEQVTP 639
Query: 445 IHVVDEPFTV 454
++ +PF V
Sbjct: 640 FILISKPFEV 649
>gi|418721482|ref|ZP_13280659.1| AMP-binding enzyme [Leptospira borgpetersenii str. UI 09149]
gi|418736583|ref|ZP_13292982.1| AMP-binding enzyme [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
gi|410742174|gb|EKQ90924.1| AMP-binding enzyme [Leptospira borgpetersenii str. UI 09149]
gi|410747469|gb|EKR00374.1| AMP-binding enzyme [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
Length = 681
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 172/490 (35%), Positives = 258/490 (52%), Gaps = 70/490 (14%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I S+D+ T +YTSGTTG PKGVML H N++HQI+ + ++ + + LS+LP WHV+ER
Sbjct: 173 IDSEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFER 232
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 233 VVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPA 291
Query: 142 VARALIRISFAYTAFK----RIYEGFCLTRNQKQPSY-----LVALIDWL---------- 182
R L R+++ ++ K R +G + + P + ++ I +L
Sbjct: 292 FRRGLFRLAYFFSRKKNQALRFLKGIEVDYTGRNPIWSFFYGILMFIQFLLTGPFTLTVF 351
Query: 183 ------------------WARIICAILWPLHLLA-EKLVYKKIQSAIGIS-KAGVSGGGS 222
+ +I + L+ +K+V KI++A G KA +SGGG+
Sbjct: 352 AGGLGAYFAGTELYYLTSFFYVIAGLALLLNSFTLDKIVLAKIRAATGGQLKASISGGGA 411
Query: 223 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 282
LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I ++ N
Sbjct: 412 LPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQI-RSDNNA 470
Query: 283 VLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 330
VL G KG+V V+G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 471 VLTEMDENGKITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAI-TDGWMNTGDMGMINF 529
Query: 331 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 390
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 530 KKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQKNL 579
Query: 391 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGP 444
GAI+VPD E++ A+ I+ + +L + + LY + K +K F Q+ P
Sbjct: 580 GAIVVPDFEKLQEWAQENGIIETNKDKLIENPRVYDLYRKEIKALNNTKNGFKSFEQVTP 639
Query: 445 IHVVDEPFTV 454
++ +PF V
Sbjct: 640 FILISKPFEV 649
>gi|398345147|ref|ZP_10529850.1| long-chain-fatty-acid CoA ligase [Leptospira inadai serovar Lyme
str. 10]
Length = 679
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 174/490 (35%), Positives = 261/490 (53%), Gaps = 70/490 (14%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I +D+ T +YTSGTTG PKGV L H N++HQ+ ++ ++ + LS+LP WHV+ER
Sbjct: 173 IKPEDLFTLIYTSGTTGLPKGVQLMHSNMMHQVLNVTPMLKINAEARLLSILPVWHVFER 232
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y S G YT VR+L+ DL +P +M S P ++E +Y+GI +I
Sbjct: 233 VVEYVCISIGATTYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPGQTPA 291
Query: 142 VARALIRISFAYT----AFKRIYEGFCLTRNQKQP--SY---LVALIDWLWA-----RII 187
RAL ++++ ++ A R G + + + P S+ ++ +I +L II
Sbjct: 292 FRRALFKLAYFFSDKNNASTRFLSGNEVDYHGRNPVKSFFYGILMVIQYLLTGPFTLSII 351
Query: 188 CAIL-------------WPLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGS 222
AI +PL++++ +K+V KI++A G + +A +SGGG+
Sbjct: 352 TAIAAYTLAPTSFGYLSFPLYIVSGLALFLNSVALDKVVLSKIRTATGGNLRASISGGGA 411
Query: 223 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 282
LP H+D F+ IG+ V GYG+TE+SPV++ R ++GSVG + T ++I + + N+
Sbjct: 412 LPRHVDEFFNNIGINVLEGYGMTETSPVLSVRTFQKLIIGSVGSIVPKTRLQIRN-DNND 470
Query: 283 VLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 330
VL G KG+V V+G QVM+GYFKN AT + L DGW+NTGD+G I
Sbjct: 471 VLTEVDEGGHITQGKLGRKGVVFVKGPQVMKGYFKNDEATAKTL-VDGWMNTGDMGMINF 529
Query: 331 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 390
+ L L GRAKDT+VL GENVEP+ +E S I Q +VIGQDQ+
Sbjct: 530 KRT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESPYISQCMVIGQDQKNL 579
Query: 391 GAIIVPDKEEVLMAAKRLSIVHADASEL-SKEKTISLLYGELRKWTS-----KCSFQIGP 444
GAII+PD E++ AK I AD +L K I E++ + K Q+ P
Sbjct: 580 GAIIIPDFEKLGEWAKENGIDVADREKLIENPKIIDFYRKEIKNLNNAKNGFKSFEQVTP 639
Query: 445 IHVVDEPFTV 454
++ +PF V
Sbjct: 640 FFLITKPFEV 649
>gi|418667893|ref|ZP_13229298.1| AMP-binding enzyme [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|410756338|gb|EKR17963.1| AMP-binding enzyme [Leptospira interrogans serovar Pyrogenes str.
2006006960]
Length = 681
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 174/490 (35%), Positives = 259/490 (52%), Gaps = 70/490 (14%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I +D+ T +YTSGTTG PKGVML H N++HQ+ + ++ + G + LS+LP WHV+ER
Sbjct: 173 IDPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKAGARLLSILPIWHVFER 232
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 233 VVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPA 291
Query: 142 VARALIRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVAL 178
+ R L ++++ ++ K R +G + + P S+ L L
Sbjct: 292 LRRGLFKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVL 351
Query: 179 IDWLWARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGS 222
L A L+ P + +A +K+V KI++A G +A +SGGG+
Sbjct: 352 AGALGAYFAGTELYFLTSPFYTVAGLALVLNSFTLDKVVLAKIRAATGGQLEASISGGGA 411
Query: 223 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 282
LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N
Sbjct: 412 LPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNA 470
Query: 283 VLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 330
VL G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 471 VLTEIDESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINF 529
Query: 331 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 390
+ L L GRAKDT+VL GENVEP+++E S+ I Q +VIGQDQ+
Sbjct: 530 KKT----------LTLTGRAKDTVVLLGGENVEPVQIENKLQESAYISQCMVIGQDQKNL 579
Query: 391 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGP 444
GAI+VPD E++ AK I ++ +L + I LY + K +K F Q+ P
Sbjct: 580 GAIVVPDFEKLQEWAKENGINESNNEKLIENPKIYDLYRKEIKALNNTKNGFKSFEQVTP 639
Query: 445 IHVVDEPFTV 454
++ +PF V
Sbjct: 640 FILISKPFEV 649
>gi|398335133|ref|ZP_10519838.1| long-chain-fatty-acid CoA ligase [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 683
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 182/495 (36%), Positives = 253/495 (51%), Gaps = 74/495 (14%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI-----RSLYDIVPAENGDKFLSMLP 74
E I +D+ T +YTSGTTG PKGVML H N++HQ+ L DI P D LS+LP
Sbjct: 173 EDIKPEDLFTLIYTSGTTGMPKGVMLMHSNMIHQMIHVVPMLLTDIKPT---DSMLSILP 229
Query: 75 PWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 134
WH++ER Y S GI+ YT V +LK+DL + +P +M S P V+E++Y+GI ++
Sbjct: 230 IWHIFERVNEYGAISSGIQTYYTKVSDLKNDLAKAKPSFMASAPRVWESVYTGIYNKVND 289
Query: 135 SSAA---RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ---------PSYLVALIDWL 182
RR + + S Y A +R G + + S +V L+
Sbjct: 290 PKQTPPLRRGLFKLAYFFSKHYNASRRFLNGLEVDYENRNILKSLAIGTKSLIVLLLTGP 349
Query: 183 WARIICAILWPLHLLA-------------------------EKLVYKKIQSAIGIS-KAG 216
+ AIL L L A + +V KI++A G K
Sbjct: 350 FTVSAMAILAYLALPAYGVHLPNALFFTIAGLGLIFNAKTLDAIVLSKIRAATGGRLKGS 409
Query: 217 VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIV 276
+SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I
Sbjct: 410 MSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELMIK 469
Query: 277 D---------AETNEVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 325
D + EVL G KG+V V+G QVM+GY+KNP TK+ + DGW+NTGDI
Sbjct: 470 DDNGHVLTHINDKYEVLAGKLGQKGVVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTGDI 528
Query: 326 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 385
G+I L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQ
Sbjct: 529 GFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPYIKQSMVIGQ 578
Query: 386 DQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF--- 440
DQ+ GAIIVPD +++ K I + EL K K I E+R + S K F
Sbjct: 579 DQKVLGAIIVPDVDQLAAWCKENGIDPSKVEELIKNPKVIDFYKKEVRSYNSTKTGFKSF 638
Query: 441 -QIGPIHVVDEPFTV 454
Q+ + + +PF V
Sbjct: 639 EQVQHVILTKKPFEV 653
>gi|421109934|ref|ZP_15570441.1| AMP-binding enzyme [Leptospira kirschneri str. H2]
gi|410004961|gb|EKO58765.1| AMP-binding enzyme [Leptospira kirschneri str. H2]
Length = 681
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 174/490 (35%), Positives = 259/490 (52%), Gaps = 70/490 (14%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I +D+ T +YTSGTTG PKGVML H N++HQ+ + ++ + G + LS+LP WHV+ER
Sbjct: 173 IHPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLNIKAGARLLSILPIWHVFER 232
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 233 VVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPA 291
Query: 142 VARALIRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVAL 178
+ R L ++++ ++ K R +G + + P S+ L L
Sbjct: 292 LRRGLFKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVL 351
Query: 179 IDWLWARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGS 222
L A L+ PL+ ++ +K+V KI++A G KA +SGGG+
Sbjct: 352 AGALGAYFAGTELYFLTSPLYTVSGLAFILNSFTLDKIVLAKIRAATGGQLKASISGGGA 411
Query: 223 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 282
LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N
Sbjct: 412 LPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNA 470
Query: 283 VLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 330
VL G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 471 VLTEVDESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINF 529
Query: 331 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 390
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 530 KKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNL 579
Query: 391 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGP 444
GAI+VPD E++ AK I ++ +L + + LY + K +K F Q+ P
Sbjct: 580 GAIVVPDFEKLQEWAKENGINESNNEKLIENSKVYDLYRKEIKALNNTKNGFKSFEQVTP 639
Query: 445 IHVVDEPFTV 454
++ +PF V
Sbjct: 640 FILISKPFEV 649
>gi|418696124|ref|ZP_13257133.1| AMP-binding enzyme [Leptospira kirschneri str. H1]
gi|409955653|gb|EKO14585.1| AMP-binding enzyme [Leptospira kirschneri str. H1]
Length = 682
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 174/490 (35%), Positives = 259/490 (52%), Gaps = 70/490 (14%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I +D+ T +YTSGTTG PKGVML H N++HQ+ + ++ + G + LS+LP WHV+ER
Sbjct: 174 IHPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLNIKAGARLLSILPIWHVFER 233
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 234 VVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPA 292
Query: 142 VARALIRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVAL 178
+ R L ++++ ++ K R +G + + P S+ L L
Sbjct: 293 LRRGLFKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVL 352
Query: 179 IDWLWARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGS 222
L A L+ PL+ ++ +K+V KI++A G KA +SGGG+
Sbjct: 353 AGALGAYFAGTELYFLTSPLYTVSGLAFILNSFTLDKIVLAKIRAATGGQLKASISGGGA 412
Query: 223 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 282
LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N
Sbjct: 413 LPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNA 471
Query: 283 VLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 330
VL G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 472 VLTEVDESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINF 530
Query: 331 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 390
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 531 KKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNL 580
Query: 391 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGP 444
GAI+VPD E++ AK I ++ +L + + LY + K +K F Q+ P
Sbjct: 581 GAIVVPDFEKLQEWAKENGINESNNEKLIENSKVYDLYRKEIKALNNTKNGFKSFEQVTP 640
Query: 445 IHVVDEPFTV 454
++ +PF V
Sbjct: 641 FILISKPFEV 650
>gi|421130910|ref|ZP_15591101.1| AMP-binding enzyme [Leptospira kirschneri str. 2008720114]
gi|410357714|gb|EKP04934.1| AMP-binding enzyme [Leptospira kirschneri str. 2008720114]
Length = 682
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 174/490 (35%), Positives = 259/490 (52%), Gaps = 70/490 (14%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I +D+ T +YTSGTTG PKGVML H N++HQ+ + ++ + G + LS+LP WHV+ER
Sbjct: 174 IHPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLNIKAGARLLSILPIWHVFER 233
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 234 VVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPA 292
Query: 142 VARALIRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVAL 178
+ R L ++++ ++ K R +G + + P S+ L L
Sbjct: 293 LRRGLFKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVL 352
Query: 179 IDWLWARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGS 222
L A L+ PL+ ++ +K+V KI++A G KA +SGGG+
Sbjct: 353 AGALGAYFAGTELYFLTSPLYTVSGLAFVLNSFALDKIVLAKIRAATGGQLKASISGGGA 412
Query: 223 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 282
LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N
Sbjct: 413 LPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNA 471
Query: 283 VLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 330
VL G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 472 VLTEVDESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINF 530
Query: 331 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 390
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 531 KKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNL 580
Query: 391 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGP 444
GAI+VPD E++ AK I ++ +L + + LY + K +K F Q+ P
Sbjct: 581 GAIVVPDFEKLQEWAKENGINESNNEKLIENSKVYDLYRKEIKALNNTKNGFKSFEQVTP 640
Query: 445 IHVVDEPFTV 454
++ +PF V
Sbjct: 641 FILISKPFEV 650
>gi|418688201|ref|ZP_13249357.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|418739660|ref|ZP_13296041.1| AMP-binding enzyme [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|410737058|gb|EKQ81800.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|410752782|gb|EKR09754.1| AMP-binding enzyme [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 682
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 174/490 (35%), Positives = 259/490 (52%), Gaps = 70/490 (14%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I +D+ T +YTSGTTG PKGVML H N++HQ+ + ++ + G + LS+LP WHV+ER
Sbjct: 174 IHPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLNIKAGARLLSILPIWHVFER 233
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 234 VVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPA 292
Query: 142 VARALIRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVAL 178
+ R L ++++ ++ K R +G + + P S+ L L
Sbjct: 293 LRRGLFKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVL 352
Query: 179 IDWLWARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGS 222
L A L+ PL+ ++ +K+V KI++A G KA +SGGG+
Sbjct: 353 AGALGAYFAGTELYFLTSPLYTVSGLAFVLNSFALDKIVLAKIRAATGGQLKASISGGGA 412
Query: 223 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 282
LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N
Sbjct: 413 LPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNA 471
Query: 283 VLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 330
VL G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 472 VLTEVDESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINF 530
Query: 331 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 390
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 531 KKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNL 580
Query: 391 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGP 444
GAI+VPD E++ AK I ++ +L + + LY + K +K F Q+ P
Sbjct: 581 GAIVVPDFEKLQEWAKENGINESNNEKLIENSKVYDLYRKEIKALNNTKNGFKSFEQVTP 640
Query: 445 IHVVDEPFTV 454
++ +PF V
Sbjct: 641 FILISKPFEV 650
>gi|421089079|ref|ZP_15549894.1| AMP-binding enzyme [Leptospira kirschneri str. 200802841]
gi|410002200|gb|EKO52722.1| AMP-binding enzyme [Leptospira kirschneri str. 200802841]
Length = 682
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 174/490 (35%), Positives = 259/490 (52%), Gaps = 70/490 (14%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I +D+ T +YTSGTTG PKGVML H N++HQ+ + ++ + G + LS+LP WHV+ER
Sbjct: 174 IHPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLNIKAGARLLSILPIWHVFER 233
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 234 VVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPA 292
Query: 142 VARALIRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVAL 178
+ R L ++++ ++ K R +G + + P S+ L L
Sbjct: 293 LRRGLFKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVL 352
Query: 179 IDWLWARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGS 222
L A L+ PL+ ++ +K+V KI++A G KA +SGGG+
Sbjct: 353 AGALGAYFAGTELYFLTSPLYTVSGLAFVLNSFTLDKIVLAKIRAATGGQLKASISGGGA 412
Query: 223 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 282
LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N
Sbjct: 413 LPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNA 471
Query: 283 VLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 330
VL G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 472 VLTEVDESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINF 530
Query: 331 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 390
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 531 KKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNL 580
Query: 391 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGP 444
GAI+VPD E++ AK I ++ +L + + LY + K +K F Q+ P
Sbjct: 581 GAIVVPDFEKLQEWAKENGINESNNEKLIENSKVYDLYRKEIKALNNTKNGFKSFEQVTP 640
Query: 445 IHVVDEPFTV 454
++ +PF V
Sbjct: 641 FILISKPFEV 650
>gi|398339044|ref|ZP_10523747.1| long-chain-fatty-acid CoA ligase [Leptospira kirschneri serovar Bim
str. 1051]
Length = 629
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 174/490 (35%), Positives = 259/490 (52%), Gaps = 70/490 (14%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I +D+ T +YTSGTTG PKGVML H N++HQ+ + ++ + G + LS+LP WHV+ER
Sbjct: 121 IHPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLNIKAGARLLSILPIWHVFER 180
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 181 VVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPA 239
Query: 142 VARALIRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVAL 178
+ R L ++++ ++ K R +G + + P S+ L L
Sbjct: 240 LRRGLFKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVL 299
Query: 179 IDWLWARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGS 222
L A L+ PL+ ++ +K+V KI++A G KA +SGGG+
Sbjct: 300 AGALGAYFAGTELYFLTSPLYTVSGLAFVLNSFTLDKIVLAKIRAATGGQLKASISGGGA 359
Query: 223 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 282
LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N
Sbjct: 360 LPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNA 418
Query: 283 VL------------PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 330
VL G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 419 VLTEVDESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINF 477
Query: 331 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 390
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 478 KKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNL 527
Query: 391 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGP 444
GAI+VPD E++ AK I ++ +L + + LY + K +K F Q+ P
Sbjct: 528 GAIVVPDFEKLQEWAKENGINESNNEKLIENSKVYDLYRKEIKALNNTKNGFKSFEQVTP 587
Query: 445 IHVVDEPFTV 454
++ +PF V
Sbjct: 588 FILISKPFEV 597
>gi|387827494|ref|YP_005806776.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi N40]
gi|312149046|gb|ADQ29117.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi N40]
Length = 645
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 158/441 (35%), Positives = 254/441 (57%), Gaps = 24/441 (5%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERA 82
S DIAT +YTSGTTG PKGVML H++ + Q+ LYD +P + G +S+LP WH +ERA
Sbjct: 182 SKDIATIIYTSGTTGMPKGVMLRHESFIFQLDRLYDYLPTLKPGKIMISILPLWHSFERA 241
Query: 83 CGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
C Y + +GI + Y+ L D P ++SVP ++E + GI K++ + S ++
Sbjct: 242 CEYIVALKGIAIAYSKPIGPVLLKDFLLLNPQMIVSVPRIWEGIRIGIIKKV-SESFIKK 300
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
V +++ Y K + G L+ K+ ++L++L L+ I +++P+ LL +
Sbjct: 301 FVFGGFLKVGIIYAKLKERFLG--LSPIYKKTNFLISLFSKLFLFIGIVLIFPIKLLGDI 358
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LV+KKI++A+G + + GVSGGG+L ++D F++A+G+KV GYGLTE+ P+++ RR
Sbjct: 359 LVFKKIKNALGQNFEFGVSGGGALVDYVDYFFKAVGIKVLEGYGLTETGPILSVRRLKGP 418
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
V +VG + E K+V + VL G KG + VR Q+M GYFK+ + T + L EDGW
Sbjct: 419 VAKTVGPILPDVEYKVVGID-GRVLSYGEKGELWVRSPQIMSGYFKDRAKTSEVLTEDGW 477
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
NTGD+ + ++ + + GR+KDTIVL GEN+EP LE +S I
Sbjct: 478 FNTGDLVRLTINNE----------ISIVGRSKDTIVLRGGENIEPEPLERVLGKSLFIEN 527
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT--SK 437
I+++GQDQ+ GA+I P+ + + A + + S+L + ++ LY + T +K
Sbjct: 528 IMIVGQDQKFLGAVIAPNFDNLEKWANSSGVSFSSRSDLLANEDVNKLYSKHISDTINTK 587
Query: 438 CSF----QIGPIHVVDEPFTV 454
F +I ++ +PFT+
Sbjct: 588 LGFKNFEKIVGFVLLQDPFTI 608
>gi|421096224|ref|ZP_15556931.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200801926]
gi|410361125|gb|EKP12171.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200801926]
Length = 681
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 172/490 (35%), Positives = 257/490 (52%), Gaps = 70/490 (14%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I S+D+ T +YTSGTTG PKGVML H N++HQI+ + ++ + + LS+LP WHV+ER
Sbjct: 173 IDSEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFER 232
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 233 VVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPA 291
Query: 142 VARALIRISFAYTAFK----RIYEGFCLTRNQKQPSY-----LVALIDWL---------- 182
R L R+++ ++ K R +G + + P + ++ I +L
Sbjct: 292 FRRGLFRLAYFFSRKKNQALRFLKGIEVDYTGRNPIWSFFYGILMFIQFLLTGPFTLTVF 351
Query: 183 ------------------WARIICAILWPLHLLA-EKLVYKKIQSAIGIS-KAGVSGGGS 222
+ +I + L+ +K+V KI++A G KA +SGGG
Sbjct: 352 AGGLGAYFAGTELYYLTSFFYVIAGLALLLNSFTLDKIVLAKIRAATGGQLKASISGGGG 411
Query: 223 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 282
LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I ++ N
Sbjct: 412 LPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQI-RSDNNA 470
Query: 283 VLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 330
VL G KG+V V+G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 471 VLTEMDENGKITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAI-TDGWMNTGDMGMINF 529
Query: 331 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 390
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 530 KKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQKNL 579
Query: 391 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGP 444
GAI+VPD E++ A+ I+ + +L + + LY + K +K F Q+ P
Sbjct: 580 GAIVVPDFEKLQEWAQENGIIETNKDKLIENPRVYDLYRKEIKALNNTKNGFKSFEQVTP 639
Query: 445 IHVVDEPFTV 454
++ +PF V
Sbjct: 640 FILISKPFEV 649
>gi|417777979|ref|ZP_12425791.1| AMP-binding enzyme [Leptospira weilii str. 2006001853]
gi|410781949|gb|EKR66516.1| AMP-binding enzyme [Leptospira weilii str. 2006001853]
Length = 682
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 171/490 (34%), Positives = 258/490 (52%), Gaps = 70/490 (14%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I S+D+ T +YTSGTTG PKGVML H N++HQI+ + ++ + + LS+LP WHV+ER
Sbjct: 174 IDSEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFER 233
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 234 VVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPA 292
Query: 142 VARALIRISFAYTAFK----RIYEGFCLTRNQKQP--SYLVALIDWL------------- 182
R L R+++ ++ K R +G + + P S+ ++ ++
Sbjct: 293 FRRGLFRLAYFFSRKKNQALRFLKGIEVDYTGRNPIGSFFYGILMFVQFLLTGPFTLTVF 352
Query: 183 ------------------WARIICAILWPLHLLA-EKLVYKKIQSAIGIS-KAGVSGGGS 222
+ +I + + L+ +K+V KI++A G KA +SGGG+
Sbjct: 353 AGVLGVYFAGTELYYLTSFLYVIAGLAFLLNSFTLDKIVLAKIRAATGGQLKASISGGGA 412
Query: 223 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 282
LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I + + N
Sbjct: 413 LPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNA 471
Query: 283 VLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 330
VL G KG+V V+G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 472 VLTEMDENGKITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAI-TDGWMNTGDMGMINF 530
Query: 331 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 390
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 531 KKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQKNL 580
Query: 391 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGP 444
GAI+VPD E++ A+ I + +L + + LY + K +K F Q+ P
Sbjct: 581 GAIVVPDFEKLQEWAQENGISETNKDKLIENPKVYDLYRKEIKALNNTKNGFKSFEQVTP 640
Query: 445 IHVVDEPFTV 454
++ +PF V
Sbjct: 641 FILISKPFEV 650
>gi|307719093|ref|YP_003874625.1| hypothetical protein STHERM_c14120 [Spirochaeta thermophila DSM
6192]
gi|306532818|gb|ADN02352.1| hypothetical protein STHERM_c14120 [Spirochaeta thermophila DSM
6192]
Length = 630
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/383 (39%), Positives = 221/383 (57%), Gaps = 19/383 (4%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E + + +AT ++TSGTTG PKGVML+H N LHQ++ + ++ GD +LS+LP WH +
Sbjct: 177 EELPASTLATVIFTSGTTGLPKGVMLSHGNFLHQVKGVPILLKVGPGDIWLSVLPVWHSF 236
Query: 80 ERACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
ER Y S + Y+ R + D+ +P +M SVP ++E + GI + I
Sbjct: 237 ERMMQYVALSSASAIAYSKPIGRIMLQDMATLKPTWMASVPRIWEGIRKGILQTIKKEPP 296
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
+ + +A + + AY F + +G L R + +P ++D + I +LWP L
Sbjct: 297 LVQAIFQASLVVGRAYAFFAHMVKG-ELPRFRWRPR----ILDRMAGLIPFLLLWPFKQL 351
Query: 198 AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 256
A LV++K+ +G AG+SGGG+LP +D F++AIG+ V GYGLTE++PV+A R
Sbjct: 352 AHLLVFRKLHRKLGGRFVAGISGGGALPPEVDGFFDAIGITVLEGYGLTEAAPVLAVRSY 411
Query: 257 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 316
V +VG TEI+I D E N VLP G +G V RG QVM GY K P T++ LDE
Sbjct: 412 YHPVPHTVGPVFPDTEIQIRDEEGN-VLPPGRQGTVFARGGQVMLGYLKAPEETRKVLDE 470
Query: 317 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 376
+GWLNTGD+G + + L + GRAKDTIVL GENVEP LE+A L
Sbjct: 471 EGWLNTGDLGMLTWDNE----------LAITGRAKDTIVLRGGENVEPAPLEQALKEHPL 520
Query: 377 IRQIVVIGQDQRRPGAIIVPDKE 399
+ +V+GQD++ GA+I D+E
Sbjct: 521 VAHAMVVGQDEKYLGALIFVDQE 543
>gi|418676760|ref|ZP_13238038.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|400322660|gb|EJO70516.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
Length = 682
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 174/490 (35%), Positives = 259/490 (52%), Gaps = 70/490 (14%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I +D+ T +YTSGTTG PKGVML H N++HQ+ + ++ + G + LS+LP WHV+ER
Sbjct: 174 IHPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLNIKAGARLLSILPIWHVFER 233
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 234 VVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPA 292
Query: 142 VARALIRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVAL 178
+ R L ++++ ++ K R +G + + P S+ L L
Sbjct: 293 LRRGLFKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVL 352
Query: 179 IDWLWARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGS 222
L A L+ PL+ ++ +K+V KI++A G KA +SGGG+
Sbjct: 353 AGALGAYFAGTELYFLTSPLYSVSGLAFVLNSFTLDKIVLAKIRAATGGQLKASISGGGA 412
Query: 223 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 282
LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N
Sbjct: 413 LPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNA 471
Query: 283 VLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 330
VL G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 472 VLTEVDESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINF 530
Query: 331 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 390
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 531 KKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNL 580
Query: 391 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGP 444
GAI+VPD E++ AK I ++ +L + + LY + K +K F Q+ P
Sbjct: 581 GAIVVPDFEKLQEWAKENGINESNNEKLIENSKVYDLYRKEIKALNNTKNGFKSFEQVTP 640
Query: 445 IHVVDEPFTV 454
++ +PF V
Sbjct: 641 FILISKPFEV 650
>gi|45657502|ref|YP_001588.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|417765801|ref|ZP_12413757.1| AMP-binding enzyme [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|417782883|ref|ZP_12430606.1| AMP-binding enzyme [Leptospira interrogans str. C10069]
gi|421086152|ref|ZP_15547003.1| AMP-binding enzyme [Leptospira santarosai str. HAI1594]
gi|421102594|ref|ZP_15563198.1| AMP-binding enzyme [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45600741|gb|AAS70225.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|400351740|gb|EJP03953.1| AMP-binding enzyme [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|409953584|gb|EKO08080.1| AMP-binding enzyme [Leptospira interrogans str. C10069]
gi|410367708|gb|EKP23092.1| AMP-binding enzyme [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410431717|gb|EKP76077.1| AMP-binding enzyme [Leptospira santarosai str. HAI1594]
Length = 681
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 174/490 (35%), Positives = 258/490 (52%), Gaps = 70/490 (14%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I +D+ T +YTSGTTG PKGVML H N++HQ+ + ++ + G + LS+LP WHV+ER
Sbjct: 173 IDPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKAGARLLSILPIWHVFER 232
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 233 VVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPA 291
Query: 142 VARALIRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVAL 178
+ R L ++++ ++ K R +G + + P S+ L L
Sbjct: 292 LRRGLFKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVL 351
Query: 179 IDWLWARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGS 222
L A L+ P + +A +K+V KI++A G +A +SGGG+
Sbjct: 352 AGALGAYFAGTELYFLTSPFYTVAGLALVLNSFTLDKVVLAKIRAATGGQLEASISGGGA 411
Query: 223 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 282
LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N
Sbjct: 412 LPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNA 470
Query: 283 VLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 330
VL G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 471 VLTEIDESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINF 529
Query: 331 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 390
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 530 KKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNL 579
Query: 391 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGP 444
GAI+VPD E++ AK I ++ +L + I LY + K +K F Q+ P
Sbjct: 580 GAIVVPDFEKLQEWAKENGINESNNEKLIENPKIYDLYRKEIKALNNTKNGFKSFEQVTP 639
Query: 445 IHVVDEPFTV 454
++ +PF V
Sbjct: 640 FILISKPFEV 649
>gi|116326895|ref|YP_796615.1| long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
gi|116329874|ref|YP_799592.1| long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
gi|116119639|gb|ABJ77682.1| Long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
gi|116123563|gb|ABJ74834.1| Long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
Length = 683
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 178/495 (35%), Positives = 247/495 (49%), Gaps = 74/495 (14%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI-----RSLYDIVPAENGDKFLSMLP 74
E I +D+ T +YTSGTTG PKGVML H N++HQ+ L D P + LS+LP
Sbjct: 173 EDIKPEDLFTLIYTSGTTGMPKGVMLMHSNMVHQMIHVVPMLLTDTKPT---NSMLSILP 229
Query: 75 PWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 134
WH++ER Y SRGI+ YT V +LK+DL + +P +M S P V+E +Y+ I ++
Sbjct: 230 IWHIFERVNEYGAISRGIQTYYTKVSDLKNDLTKAKPSFMGSAPRVWENVYTNIYNKVND 289
Query: 135 SSAA---RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ-------------------- 171
R+ + + S Y A +R G + +
Sbjct: 290 PKQTPPLRKFLFKLAYFFSKHYNASRRFLNGLEVDYENRSILKSIAIGTKSLIVLLLTGP 349
Query: 172 --------------PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAG 216
P+Y V L W + I L + +V KI++A G K
Sbjct: 350 FTLSAIAILAYLALPTYGVRLPGWFFFTIAGLGLIFNAKTLDAIVLSKIRAATGGRLKGS 409
Query: 217 VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIV 276
+SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I
Sbjct: 410 LSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFAKPIIGSVGFLVPKSELMIK 469
Query: 277 DAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 325
D N EVL G KGIV V+G QVM+GY+K+P TK+ + DGW+NTGDI
Sbjct: 470 DENGNILTHINDKFEVLAGKLGQKGIVFVKGPQVMKGYYKDPEVTKKTI-VDGWMNTGDI 528
Query: 326 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 385
G+I L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQ
Sbjct: 529 GFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQ 578
Query: 386 DQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF--- 440
D++ GAIIVPD E + K I + EL K K I E+R + S K F
Sbjct: 579 DKKVLGAIIVPDMEHLTFWCKENGIDSSKIDELIKNPKVIEFYKKEVRNYNSTKTGFKSF 638
Query: 441 -QIGPIHVVDEPFTV 454
Q+ + + +PF V
Sbjct: 639 EQVQHVILAKKPFEV 653
>gi|418720213|ref|ZP_13279411.1| AMP-binding enzyme [Leptospira borgpetersenii str. UI 09149]
gi|418735548|ref|ZP_13291958.1| AMP-binding enzyme [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
gi|421095199|ref|ZP_15555912.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200801926]
gi|410361909|gb|EKP12949.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200801926]
gi|410743191|gb|EKQ91934.1| AMP-binding enzyme [Leptospira borgpetersenii str. UI 09149]
gi|410748682|gb|EKR01576.1| AMP-binding enzyme [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
gi|456886947|gb|EMF98051.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200701203]
Length = 683
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 178/495 (35%), Positives = 247/495 (49%), Gaps = 74/495 (14%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI-----RSLYDIVPAENGDKFLSMLP 74
E I +D+ T +YTSGTTG PKGVML H N++HQ+ L D P + LS+LP
Sbjct: 173 EDIKPEDLFTLIYTSGTTGMPKGVMLMHSNMVHQMIHVVPMLLTDTKPT---NSMLSILP 229
Query: 75 PWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 134
WH++ER Y SRGI+ YT V +LK+DL + +P +M S P V+E +Y+ I ++
Sbjct: 230 IWHIFERVNEYGAISRGIQTYYTKVSDLKNDLTKAKPSFMGSAPRVWENVYTNIYNKVND 289
Query: 135 SSAA---RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ-------------------- 171
R+ + + S Y A +R G + +
Sbjct: 290 PKQTPPLRKFLFKLAYFFSKHYNASRRFLNGLEVDYENRSILKSIAIGTKSLIVLLLTGP 349
Query: 172 --------------PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAG 216
P+Y V L W + I L + +V KI++A G K
Sbjct: 350 FTLSAIAILAYLALPTYGVRLPGWFFFTIAGLGLIFNAKTLDAIVLSKIRAATGGRLKGS 409
Query: 217 VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIV 276
+SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I
Sbjct: 410 LSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFAKPIIGSVGFLVPKSELMIK 469
Query: 277 DAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 325
D N EVL G KGIV V+G QVM+GY+K+P TK+ + DGW+NTGDI
Sbjct: 470 DENGNILTHINDKFEVLAGKLGQKGIVFVKGPQVMKGYYKDPEVTKKTI-VDGWMNTGDI 528
Query: 326 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 385
G+I L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQ
Sbjct: 529 GFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQ 578
Query: 386 DQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF--- 440
D++ GAIIVPD E + K I + EL K K I E+R + S K F
Sbjct: 579 DKKVLGAIIVPDMEHLTFWCKENGIDSSKIDELIKNPKVIEFYKKEVRNYNSTKTGFKSF 638
Query: 441 -QIGPIHVVDEPFTV 454
Q+ + + +PF V
Sbjct: 639 EQVQHVILAKKPFEV 653
>gi|456986311|gb|EMG21907.1| AMP-binding enzyme [Leptospira interrogans serovar Copenhageni str.
LT2050]
Length = 646
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 174/490 (35%), Positives = 258/490 (52%), Gaps = 70/490 (14%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I +D+ T +YTSGTTG PKGVML H N++HQ+ + ++ + G + LS+LP WHV+ER
Sbjct: 135 IDPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKAGARLLSILPIWHVFER 194
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 195 VVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPA 253
Query: 142 VARALIRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVAL 178
+ R L ++++ ++ K R +G + + P S+ L L
Sbjct: 254 LRRGLFKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVL 313
Query: 179 IDWLWARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGS 222
L A L+ P + +A +K+V KI++A G +A +SGGG+
Sbjct: 314 AGALGAYFAGTELYFLTSPFYTVAGLALVLNSFTLDKVVLAKIRAATGGQLEASISGGGA 373
Query: 223 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 282
LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N
Sbjct: 374 LPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNA 432
Query: 283 VL------------PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 330
VL G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 433 VLTEIDESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINF 491
Query: 331 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 390
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 492 KKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNL 541
Query: 391 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGP 444
GAI+VPD E++ AK I ++ +L + I LY + K +K F Q+ P
Sbjct: 542 GAIVVPDFEKLQEWAKENGINESNNEKLIENPKIYDLYRKEIKALNNTKNGFKSFEQVTP 601
Query: 445 IHVVDEPFTV 454
++ +PF V
Sbjct: 602 FILISKPFEV 611
>gi|183222283|ref|YP_001840279.1| long-chain acyl-CoA synthetase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189912333|ref|YP_001963888.1| long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167777009|gb|ABZ95310.1| Long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167780705|gb|ABZ99003.1| Long-chain acyl-CoA synthetase (AMP-forming) [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 629
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 154/392 (39%), Positives = 229/392 (58%), Gaps = 28/392 (7%)
Query: 17 YKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPW 76
++ TI D+ T +YTSGTTG PKGVMLTH N+L Q+ +L + GDK LS+LP W
Sbjct: 173 FQNNTIIESDLFTMIYTSGTTGTPKGVMLTHGNILFQLHNL--PIRLNKGDKTLSILPIW 230
Query: 77 HVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
H++ER F S G Y++VR LK+DL+ +P++M S P ++E++YSGI + SS
Sbjct: 231 HIFERIFEIFSLSYGACTYYSSVRTLKEDLRFVKPNFMASAPRLWESIYSGILGTLNKSS 290
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVAL-IDWLWARIICAILWPLH 195
++ + + + + + ++I G L P I +++ I ++W +
Sbjct: 291 RLKQKMFQVSMFFAKIFFHSRQIITGNVL---DIHPIVFWKFSIRYVFHLIRFFLVWIPY 347
Query: 196 LLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
L+ + LV KI+ A G + VSGGG+LP H+D F+ IG+ V GYG+TE++PV+A R
Sbjct: 348 LVFDFLVLSKIRKATGGELRGSVSGGGALPFHVDEFFNMIGIPVLEGYGMTETAPVLAMR 407
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPA--------GSKGIVKVRGSQVMQGYFKN 306
+ GSVG T++++VD +T EV G KG + V+G+QVM GY+KN
Sbjct: 408 TFEEIIPGSVGKIFPKTQLRLVDLQTGEVFLDTEIGKFVYGRKGEIHVKGNQVMAGYYKN 467
Query: 307 PSATKQALDEDGWLNTGDIG-WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 365
P AT + L DGWLNTGD+G + + HH R + GR+K+TIVL GENVEP+
Sbjct: 468 PDATNKVL-VDGWLNTGDLGIFTSNHHLR-----------IVGRSKETIVLLGGENVEPV 515
Query: 366 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 397
+E L S I Q +V+GQDQ+ A++ P+
Sbjct: 516 PIESKILESEWIDQCMVVGQDQKFLSALVYPN 547
>gi|24215009|ref|NP_712490.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. 56601]
gi|417762662|ref|ZP_12410650.1| AMP-binding enzyme [Leptospira interrogans str. 2002000624]
gi|417772209|ref|ZP_12420098.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Pomona]
gi|417777581|ref|ZP_12425398.1| AMP-binding enzyme [Leptospira interrogans str. 2002000621]
gi|418671706|ref|ZP_13233055.1| AMP-binding enzyme [Leptospira interrogans str. 2002000623]
gi|418680951|ref|ZP_13242188.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|418692704|ref|ZP_13253782.1| AMP-binding enzyme [Leptospira interrogans str. FPW2026]
gi|418704164|ref|ZP_13265043.1| AMP-binding enzyme [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|418730633|ref|ZP_13289127.1| AMP-binding enzyme [Leptospira interrogans str. UI 12758]
gi|421120870|ref|ZP_15581175.1| AMP-binding enzyme [Leptospira interrogans str. Brem 329]
gi|24196054|gb|AAN49508.1|AE011400_13 long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. 56601]
gi|400327389|gb|EJO79641.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|400357937|gb|EJP14057.1| AMP-binding enzyme [Leptospira interrogans str. FPW2026]
gi|409941407|gb|EKN87036.1| AMP-binding enzyme [Leptospira interrogans str. 2002000624]
gi|409945580|gb|EKN95595.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Pomona]
gi|410346208|gb|EKO97218.1| AMP-binding enzyme [Leptospira interrogans str. Brem 329]
gi|410572568|gb|EKQ35633.1| AMP-binding enzyme [Leptospira interrogans str. 2002000621]
gi|410581404|gb|EKQ49216.1| AMP-binding enzyme [Leptospira interrogans str. 2002000623]
gi|410766144|gb|EKR36832.1| AMP-binding enzyme [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|410774842|gb|EKR54846.1| AMP-binding enzyme [Leptospira interrogans str. UI 12758]
gi|455667422|gb|EMF32743.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str. Fox
32256]
Length = 681
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 174/490 (35%), Positives = 258/490 (52%), Gaps = 70/490 (14%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I +D+ T +YTSGTTG PKGVML H N++HQ+ + ++ + G + LS+LP WHV+ER
Sbjct: 173 IDPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKAGARLLSILPIWHVFER 232
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 233 VVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPA 291
Query: 142 VARALIRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVAL 178
+ R L ++++ ++ K R +G + + P S+ L L
Sbjct: 292 LRRGLFKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVL 351
Query: 179 IDWLWARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGS 222
L A L+ P + +A +K+V KI++A G +A +SGGG+
Sbjct: 352 AGALGAYFAGTELYFLTSPFYTVAGLALVLNSFTLDKVVLAKIRAATGGQLEASISGGGA 411
Query: 223 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 282
LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N
Sbjct: 412 LPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNA 470
Query: 283 VLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 330
VL G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 471 VLTEIDESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINF 529
Query: 331 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 390
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 530 KKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNL 579
Query: 391 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGP 444
GAI+VPD E++ AK I ++ +L + I LY + K +K F Q+ P
Sbjct: 580 GAIVVPDFEKLQEWAKENGINESNNEKLIENPKIYDLYRKEIKALNNTKNGFKSFEQVTP 639
Query: 445 IHVVDEPFTV 454
++ +PF V
Sbjct: 640 FILISKPFEV 649
>gi|116330937|ref|YP_800655.1| long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
gi|116124626|gb|ABJ75897.1| Long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
Length = 681
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 170/490 (34%), Positives = 258/490 (52%), Gaps = 70/490 (14%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I S+D+ T +YTSGTTG PKGVML H N++HQI+ + ++ + + LS+LP WHV+ER
Sbjct: 173 IDSEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPVWHVFER 232
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 233 VVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPA 291
Query: 142 VARALIRISFAYTAFK----RIYEGFCLTRNQKQPSY-----LVALIDWL---------- 182
R L R+++ ++ K R +G + + P + ++ I +L
Sbjct: 292 FRRGLFRLAYFFSRKKNQALRFLKGIEVDYTGRNPIWSFFYGILMFIQFLLTGPFTLTVF 351
Query: 183 ------------------WARIICAILWPLHLLA-EKLVYKKIQSAIGIS-KAGVSGGGS 222
+ +I + L+ +K+V KI++A G KA +SGGG+
Sbjct: 352 AGALGAYFAGTELYYLTSFFYVIAGLALLLNSFTLDKIVLAKIRAATGGQLKASISGGGA 411
Query: 223 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 282
LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I + + N
Sbjct: 412 LPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNA 470
Query: 283 VLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 330
VL G KG++ ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 471 VLTEMDENGKITQGKLGLKGVLFIKGPQVMKGYFKNEEATSKAI-TDGWMNTGDMGMINF 529
Query: 331 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 390
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 530 KKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQKNL 579
Query: 391 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGP 444
GAI+VPD E++ A+ I+ + +L + + LY + K +K F Q+ P
Sbjct: 580 GAIVVPDFEKLQEWAQENGIIETNKDKLIENPRVYDLYRKEIKALNNTKNGFKSFEQVTP 639
Query: 445 IHVVDEPFTV 454
++ +PF V
Sbjct: 640 FILISKPFEV 649
>gi|456821979|gb|EMF70485.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
LT1962]
Length = 643
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 174/490 (35%), Positives = 258/490 (52%), Gaps = 70/490 (14%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I +D+ T +YTSGTTG PKGVML H N++HQ+ + ++ + G + LS+LP WHV+ER
Sbjct: 135 IDPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKAGARLLSILPIWHVFER 194
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 195 VVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPA 253
Query: 142 VARALIRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVAL 178
+ R L ++++ ++ K R +G + + P S+ L L
Sbjct: 254 LRRGLFKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVL 313
Query: 179 IDWLWARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGS 222
L A L+ P + +A +K+V KI++A G +A +SGGG+
Sbjct: 314 AGALGAYFAGTELYFLTSPFYTVAGLALVLNSFTLDKVVLAKIRAATGGQLEASISGGGA 373
Query: 223 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 282
LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N
Sbjct: 374 LPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNA 432
Query: 283 VLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 330
VL G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 433 VLTEIDESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINF 491
Query: 331 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 390
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 492 KKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNL 541
Query: 391 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGP 444
GAI+VPD E++ AK I ++ +L + I LY + K +K F Q+ P
Sbjct: 542 GAIVVPDFEKLQEWAKENGINESNNEKLIENPKIYDLYRKEIKALNNTKNGFKSFEQVTP 601
Query: 445 IHVVDEPFTV 454
++ +PF V
Sbjct: 602 FILISKPFEV 611
>gi|418755411|ref|ZP_13311616.1| AMP-binding enzyme [Leptospira santarosai str. MOR084]
gi|409964206|gb|EKO32098.1| AMP-binding enzyme [Leptospira santarosai str. MOR084]
Length = 681
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 171/492 (34%), Positives = 259/492 (52%), Gaps = 74/492 (15%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I S+D+ T +YTSGTTG PKGVML H N++HQI+ + ++ + + LS+LP WHV+ER
Sbjct: 173 IDSEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFER 232
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 233 VVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPA 291
Query: 142 VARALIRISFAYTAFK----RIYEGFCLTRNQKQP--SYLVALIDWLWARIICAILWPLH 195
R L ++++ ++ K R +G + + P S+ ++ ++ + + + L
Sbjct: 292 FRRGLFKLAYFFSRKKNQAFRFLKGIEVDYTGRNPIASFFYGIL--MFVQFLLTGPFTLT 349
Query: 196 LLA----------------------------------EKLVYKKIQSAIGIS-KAGVSGG 220
+LA +K+V KI++A G KA +SGG
Sbjct: 350 VLAGAFGVYLAGTELYYLTSFFYTVAGLAFFLNSFTLDKIVLSKIRAATGGQLKASISGG 409
Query: 221 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 280
G+LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I + +
Sbjct: 410 GALPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQIRN-DN 468
Query: 281 NEVLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWI 328
N VL G KG+V V+G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 469 NAVLTEIDENGNITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAII-DGWMNTGDMGMI 527
Query: 329 APHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQR 388
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 528 NFKKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQK 577
Query: 389 RPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QI 442
GAI+VPD E++ A+ I + +L + + + LY + K +K F Q+
Sbjct: 578 NLGAIVVPDFEKLQEWAQENGINETNKDKLIENQKVYDLYRKEIKALNNTKNGFKSFEQV 637
Query: 443 GPIHVVDEPFTV 454
P ++ +PF V
Sbjct: 638 TPFILISKPFEV 649
>gi|116328213|ref|YP_797933.1| long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
gi|116120957|gb|ABJ79000.1| Long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
Length = 681
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 170/490 (34%), Positives = 258/490 (52%), Gaps = 70/490 (14%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I S+D+ T +YTSGTTG PKGVML H N++HQI+ + ++ + + LS+LP WHV+ER
Sbjct: 173 IDSEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFER 232
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 233 VVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPA 291
Query: 142 VARALIRISFAYTAFK----RIYEGFCLTRNQKQPSY-----LVALIDWL---------- 182
R L R+++ ++ K R +G + + P + ++ I +L
Sbjct: 292 FRRGLFRLAYFFSRKKNQALRFLKGIEVDYTGRNPIWSFFYGILMFIQFLLTGPFTLTVF 351
Query: 183 ------------------WARIICAILWPLHLLA-EKLVYKKIQSAIGIS-KAGVSGGGS 222
+ +I + L+ +K+V KI++A G KA +SGGG+
Sbjct: 352 AGALGAYFAGTELYYLTSFFYVIAGLALLLNSFTLDKIVLAKIRAATGGQLKASISGGGA 411
Query: 223 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 282
LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I + + N
Sbjct: 412 LPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNA 470
Query: 283 VLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 330
VL G KG++ ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 471 VLTEMDENGKITQGKLGLKGVLFIKGPQVMKGYFKNEEATSKAI-TDGWMNTGDMGMINF 529
Query: 331 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 390
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 530 KKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQKNL 579
Query: 391 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGP 444
GAI+VPD E++ A+ I+ + +L + + LY + K +K F Q+ P
Sbjct: 580 GAIVVPDFEKLQEWAQENGIIETNKDKLIENPRVYDLYRKEIKALNNTKNGFKSFEQVTP 639
Query: 445 IHVVDEPFTV 454
++ +PF V
Sbjct: 640 FILISKPFEV 649
>gi|421117548|ref|ZP_15577908.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410010882|gb|EKO69013.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
Length = 681
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 176/494 (35%), Positives = 257/494 (52%), Gaps = 78/494 (15%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I +D+ T +YTSGTTG PKGVML H N++HQ+ + ++ + G + LS+LP WHV+ER
Sbjct: 173 IDPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKAGARLLSILPIWHVFER 232
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 233 VVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPA 291
Query: 142 VARALIRISFAYTAFK----RIYEG-----------------------FCLTRNQKQPSY 174
+ R L ++++ ++ K R +G F LT P
Sbjct: 292 LRRGLFKLAYFFSRKKNQALRFLKGIEVDYAGRNPIVSFFYGILMFFQFLLT----GPFT 347
Query: 175 LVALIDWLWARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVS 218
L L L A L+ P + +A +K+V KI++A G +A +S
Sbjct: 348 LTVLAGALGAYFAGTELYFLTSPFYTVAGLALVLNSFTLDKVVLAKIRAATGGQLEASIS 407
Query: 219 GGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA 278
GGG+LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I +
Sbjct: 408 GGGALPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN- 466
Query: 279 ETNEVLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG 326
+ N VL G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G
Sbjct: 467 DNNAVLTEIDESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMG 525
Query: 327 WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD 386
I + L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQD
Sbjct: 526 MINFKKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQD 575
Query: 387 QRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF---- 440
Q+ GAI+VPD E++ AK I ++ +L + I LY + K +K F
Sbjct: 576 QKNLGAIVVPDFEKLQEWAKENGINESNNEKLIENPKIYDLYRKEIKALNNTKNGFKSFE 635
Query: 441 QIGPIHVVDEPFTV 454
Q+ P ++ +PF V
Sbjct: 636 QVTPFILISKPFEV 649
>gi|422004329|ref|ZP_16351549.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai serovar
Shermani str. LT 821]
gi|417256998|gb|EKT86406.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai serovar
Shermani str. LT 821]
Length = 681
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 171/492 (34%), Positives = 259/492 (52%), Gaps = 74/492 (15%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I S+D+ T +YTSGTTG PKGVML H N++HQI+ + ++ + + LS+LP WHV+ER
Sbjct: 173 IDSEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFER 232
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 233 VVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPA 291
Query: 142 VARALIRISFAYTAFK----RIYEGFCLTRNQKQP--SYLVALIDWLWARIICAILWPLH 195
R L ++++ ++ K R +G + + P S+ ++ ++ + + + L
Sbjct: 292 FRRGLFKLAYFFSRKKNQAFRFLKGIEVDYTGRNPIASFFYGIL--MFVQFLLTGPFTLT 349
Query: 196 LLA----------------------------------EKLVYKKIQSAIGIS-KAGVSGG 220
+LA +K+V KI++A G KA +SGG
Sbjct: 350 VLAGVFGVYLAGTELYYLTSFFYTVAGLAFLLNSFTLDKIVLSKIRAATGGQLKASISGG 409
Query: 221 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 280
G+LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I + +
Sbjct: 410 GALPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQIRN-DN 468
Query: 281 NEVLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWI 328
N VL G KG+V V+G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 469 NAVLTEIDENGNITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAII-DGWMNTGDMGMI 527
Query: 329 APHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQR 388
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 528 NFKKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQK 577
Query: 389 RPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QI 442
GAI+VPD E++ A+ I + +L + + + LY + K +K F Q+
Sbjct: 578 NLGAIVVPDFEKLQEWAQENGINETNKDKLIENQKVYDLYRKEIKALNNTKNGFKSFEQV 637
Query: 443 GPIHVVDEPFTV 454
P ++ +PF V
Sbjct: 638 TPFILISKPFEV 649
>gi|418698153|ref|ZP_13259132.1| AMP-binding enzyme [Leptospira interrogans serovar Bataviae str.
L1111]
gi|418711864|ref|ZP_13272616.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|418717129|ref|ZP_13276966.1| AMP-binding enzyme [Leptospira interrogans str. UI 08452]
gi|418726085|ref|ZP_13284696.1| AMP-binding enzyme [Leptospira interrogans str. UI 12621]
gi|421123845|ref|ZP_15584115.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421135046|ref|ZP_15595176.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|409959995|gb|EKO23749.1| AMP-binding enzyme [Leptospira interrogans str. UI 12621]
gi|410020929|gb|EKO87724.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410438332|gb|EKP87418.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|410762857|gb|EKR29016.1| AMP-binding enzyme [Leptospira interrogans serovar Bataviae str.
L1111]
gi|410767830|gb|EKR43091.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|410787196|gb|EKR80930.1| AMP-binding enzyme [Leptospira interrogans str. UI 08452]
gi|456969848|gb|EMG10764.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. LT2186]
Length = 681
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 174/490 (35%), Positives = 258/490 (52%), Gaps = 70/490 (14%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I +D+ T +YTSGTTG PKGVML H N++HQ+ + ++ + G + LS+LP WHV+ER
Sbjct: 173 IHPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKAGARLLSILPIWHVFER 232
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 233 VVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPA 291
Query: 142 VARALIRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVAL 178
+ R L ++++ ++ K R +G + + P S+ L L
Sbjct: 292 LRRGLFKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVL 351
Query: 179 IDWLWARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGS 222
L A L+ P + +A +K+V KI++A G +A +SGGG+
Sbjct: 352 AGALGAYFAGTELYFLTSPFYTVAGLALVLNSFTLDKVVLAKIRAATGGQLEASISGGGA 411
Query: 223 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 282
LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N
Sbjct: 412 LPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNA 470
Query: 283 VLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 330
VL G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 471 VLTEIDESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINF 529
Query: 331 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 390
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 530 KKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNL 579
Query: 391 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGP 444
GAI+VPD E++ AK I ++ +L + I LY + K +K F Q+ P
Sbjct: 580 GAIVVPDFEKLQEWAKENGINESNNEKLIENPKIYDLYRKEIKALNNTKNGFKSFEQVTP 639
Query: 445 IHVVDEPFTV 454
++ +PF V
Sbjct: 640 FILISKPFEV 649
>gi|359685931|ref|ZP_09255932.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai str.
2000030832]
Length = 681
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 171/492 (34%), Positives = 259/492 (52%), Gaps = 74/492 (15%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I S+D+ T +YTSGTTG PKGVML H N++HQI+ + ++ + + LS+LP WHV+ER
Sbjct: 173 IDSEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFER 232
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 233 VVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPA 291
Query: 142 VARALIRISFAYTAFK----RIYEGFCLTRNQKQP--SYLVALIDWLWARIICAILWPLH 195
R L ++++ ++ K R +G + + P S+ ++ ++ + + + L
Sbjct: 292 FRRGLFKLAYFFSRKKNQAFRFLKGIEVDYTGRNPIASFFYGIL--MFVQFLLTGPFTLT 349
Query: 196 LLA----------------------------------EKLVYKKIQSAIGIS-KAGVSGG 220
+LA +K+V KI++A G KA +SGG
Sbjct: 350 VLAGVFGVYLAGTELYYLTSFFYTVAGLAFLLNSFTLDKIVLSKIRAATGGQLKASISGG 409
Query: 221 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 280
G+LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I + +
Sbjct: 410 GALPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQIRN-DN 468
Query: 281 NEVLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWI 328
N VL G KG+V V+G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 469 NAVLTEIDENGNITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAII-DGWMNTGDMGMI 527
Query: 329 APHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQR 388
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 528 NFKKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQK 577
Query: 389 RPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QI 442
GAI+VPD E++ A+ I + +L + + + LY + K +K F Q+
Sbjct: 578 NLGAIVVPDFEKLQEWAQENGINETNKDKLIENQKVYDLYRKEIKALNNTKNGFKSFEQV 637
Query: 443 GPIHVVDEPFTV 454
P ++ +PF V
Sbjct: 638 TPFILISKPFEV 649
>gi|418746716|ref|ZP_13303036.1| AMP-binding enzyme [Leptospira santarosai str. CBC379]
gi|410792425|gb|EKR90360.1| AMP-binding enzyme [Leptospira santarosai str. CBC379]
Length = 682
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 171/492 (34%), Positives = 259/492 (52%), Gaps = 74/492 (15%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I S+D+ T +YTSGTTG PKGVML H N++HQI+ + ++ + + LS+LP WHV+ER
Sbjct: 174 IDSEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFER 233
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 234 VVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPA 292
Query: 142 VARALIRISFAYTAFK----RIYEGFCLTRNQKQP--SYLVALIDWLWARIICAILWPLH 195
R L ++++ ++ K R +G + + P S+ ++ ++ + + + L
Sbjct: 293 FRRGLFKLAYFFSRKKNQAFRFLKGIEVDYTGRNPIASFFYGIL--MFVQFLLTGPFTLT 350
Query: 196 LLA----------------------------------EKLVYKKIQSAIGIS-KAGVSGG 220
+LA +K+V KI++A G KA +SGG
Sbjct: 351 VLAGVFGVYLAGTELYYLTSFFYTVAGLAFFLNSFTLDKIVLSKIRAATGGQLKASISGG 410
Query: 221 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 280
G+LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I + +
Sbjct: 411 GALPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQIRN-DN 469
Query: 281 NEVLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWI 328
N VL G KG+V V+G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 470 NAVLTEIDENGNITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAII-DGWMNTGDMGMI 528
Query: 329 APHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQR 388
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 529 NFKKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQK 578
Query: 389 RPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QI 442
GAI+VPD E++ A+ I + +L + + + LY + K +K F Q+
Sbjct: 579 NLGAIVVPDFEKLQEWAQENGINETNKDKLIENQKVYDLYRKEIKALNNTKNGFKSFEQV 638
Query: 443 GPIHVVDEPFTV 454
P ++ +PF V
Sbjct: 639 TPFILISKPFEV 650
>gi|410450361|ref|ZP_11304402.1| AMP-binding enzyme [Leptospira sp. Fiocruz LV3954]
gi|410015874|gb|EKO77965.1| AMP-binding enzyme [Leptospira sp. Fiocruz LV3954]
gi|456875112|gb|EMF90343.1| AMP-binding enzyme [Leptospira santarosai str. ST188]
Length = 682
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 171/492 (34%), Positives = 259/492 (52%), Gaps = 74/492 (15%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I S+D+ T +YTSGTTG PKGVML H N++HQI+ + ++ + + LS+LP WHV+ER
Sbjct: 174 IDSEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFER 233
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 234 VVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPA 292
Query: 142 VARALIRISFAYTAFK----RIYEGFCLTRNQKQP--SYLVALIDWLWARIICAILWPLH 195
R L ++++ ++ K R +G + + P S+ ++ ++ + + + L
Sbjct: 293 FRRGLFKLAYFFSRKKNQAFRFLKGIEVDYTGRNPIASFFYGIL--MFVQFLLTGPFTLT 350
Query: 196 LLA----------------------------------EKLVYKKIQSAIGIS-KAGVSGG 220
+LA +K+V KI++A G KA +SGG
Sbjct: 351 VLAGVFGVYLAGTELYYLTSFFYTVAGLAFFLNSFTLDKIVLSKIRAATGGQLKASISGG 410
Query: 221 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 280
G+LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I + +
Sbjct: 411 GALPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQIRN-DN 469
Query: 281 NEVLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWI 328
N VL G KG+V V+G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 470 NAVLTEIDENGNITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAII-DGWMNTGDMGMI 528
Query: 329 APHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQR 388
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 529 NFKKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQK 578
Query: 389 RPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QI 442
GAI+VPD E++ A+ I + +L + + + LY + K +K F Q+
Sbjct: 579 NLGAIVVPDFEKLQEWAQENGINETNKDKLIENQKVYDLYRKEIKALNNTKNGFKSFEQV 638
Query: 443 GPIHVVDEPFTV 454
P ++ +PF V
Sbjct: 639 TPFILISKPFEV 650
>gi|421097955|ref|ZP_15558632.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200901122]
gi|410799027|gb|EKS01110.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200901122]
Length = 681
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 174/490 (35%), Positives = 259/490 (52%), Gaps = 70/490 (14%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I S+D+ T +YTSGTTG PKGVML H N++HQI + ++ + + LS+LP WHV+ER
Sbjct: 173 INSEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIIYVSPMLDINSEARLLSILPIWHVFER 232
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 233 VVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPA 291
Query: 142 VARALIRISFAYTAFK----RIYEGFCLTRNQKQP--SYLVALIDWL------------- 182
R L R+++ ++ K R +G + + P S+ ++ ++
Sbjct: 292 FRRGLFRLAYFFSRKKNQALRFLKGIEVDYTGRNPIGSFFYGILMFIQFLLTGPFTLTIF 351
Query: 183 -------WARI----ICAILWPLHLLA--------EKLVYKKIQSAIGIS-KAGVSGGGS 222
AR + + L+ + LA +K+V KI++A G KA +SGGG+
Sbjct: 352 AGVLGVYLARTELYYLTSFLYVIAGLALLLNSFTLDKIVLAKIRAATGGQLKASISGGGA 411
Query: 223 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 282
LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I + + N
Sbjct: 412 LPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNA 470
Query: 283 VLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 330
VL G KG+V V+G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 471 VLTEMDENGKITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAI-TDGWMNTGDMGMINF 529
Query: 331 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 390
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 530 KKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQKNL 579
Query: 391 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGP 444
GAI+VPD E++ A+ I + +L + + LY + K +K F Q+ P
Sbjct: 580 GAIVVPDFEKLQEWAQENGINETNKDKLIENPKVYDLYRKEIKALNNTKNGFKSFEQVTP 639
Query: 445 IHVVDEPFTV 454
++ +PF V
Sbjct: 640 FILISKPFEV 649
>gi|421113459|ref|ZP_15573903.1| AMP-binding enzyme [Leptospira santarosai str. JET]
gi|410801233|gb|EKS07407.1| AMP-binding enzyme [Leptospira santarosai str. JET]
Length = 681
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 171/492 (34%), Positives = 259/492 (52%), Gaps = 74/492 (15%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I S+D+ T +YTSGTTG PKGVML H N++HQI+ + ++ + + LS+LP WHV+ER
Sbjct: 173 IDSEDLFTLIYTSGTTGLPKGVMLKHSNMMHQIKYVSPMLDINSEARLLSILPIWHVFER 232
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 233 VVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPA 291
Query: 142 VARALIRISFAYTAFK----RIYEGFCLTRNQKQP--SYLVALIDWLWARIICAILWPLH 195
R L ++++ ++ K R +G + + P S+ ++ ++ + + + L
Sbjct: 292 FRRGLFKLAYFFSRKKNQAFRFLKGIEVDYTGRNPIASFFYGIL--MFVQFLLTGPFTLT 349
Query: 196 LLA----------------------------------EKLVYKKIQSAIGIS-KAGVSGG 220
+LA +K+V KI++A G KA +SGG
Sbjct: 350 VLAGVFGVYLAGTELYYLTSFFYTVAGLAFLLNSFTLDKVVLSKIRAATGGQLKASISGG 409
Query: 221 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 280
G+LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG T+++I + +
Sbjct: 410 GALPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIAPKTKLQIRN-DN 468
Query: 281 NEVLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWI 328
N VL G KG+V V+G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 469 NAVLTEIDENGNITQGKLGLKGVVFVKGPQVMKGYFKNEEATSKAII-DGWMNTGDMGMI 527
Query: 329 APHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQR 388
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 528 NFKKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESTYISQCMVIGQDQK 577
Query: 389 RPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QI 442
GAI+VPD E++ A+ I + +L + + + LY + K +K F Q+
Sbjct: 578 NLGAIVVPDFEKLQEWAQENGINETNKDKLIENQKVYDLYRKEIKALNNTKNGFKSFEQV 637
Query: 443 GPIHVVDEPFTV 454
P ++ +PF V
Sbjct: 638 TPFILISKPFEV 649
>gi|398347129|ref|ZP_10531832.1| long-chain-fatty-acid CoA ligase [Leptospira broomii str. 5399]
Length = 679
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 173/490 (35%), Positives = 261/490 (53%), Gaps = 70/490 (14%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I +D+ T +YTSGTTG PKGV L H N++HQ+ ++ ++ K LS+LP WHV+ER
Sbjct: 173 IKPEDLFTLIYTSGTTGLPKGVQLMHSNMMHQVLNVTPMLKINAEAKLLSILPVWHVFER 232
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y S G YT VR+L+ DL +P +M S P ++E +Y+GI +I S
Sbjct: 233 VVEYVCISIGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRINDPSQTP-T 291
Query: 142 VARALIRISFAYT----AFKRIYEGFCLTRNQKQP--SY---LVALIDWLWA-----RII 187
+ R L ++++ ++ A R G + + + P S+ ++ +I +L II
Sbjct: 292 IRRTLFKLAYFFSDKNNASTRFLSGNEVDYHGRNPISSFFYGILMVIQYLLTGPFTLSII 351
Query: 188 CAIL-------------WPLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGS 222
AI PL++++ +K+V KI++A G + +A +SGGG+
Sbjct: 352 TAIAAYMLAPTSFGYLSLPLYVVSGLGLFLNSATLDKVVLSKIRTATGGNLRASISGGGA 411
Query: 223 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 282
LP H+D F+ IG+ V GYG+TE+SPV++ R ++GSVG + T ++I + + N+
Sbjct: 412 LPRHVDEFFNNIGINVLEGYGMTETSPVLSVRTFQKLIIGSVGSIVPKTRLQIRN-DNND 470
Query: 283 VLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 330
VL G KG+V V+G QVM+GYFKN AT + L DGW+NTGD+G I
Sbjct: 471 VLTEVDEGGHITQGKLGRKGVVFVKGPQVMKGYFKNDEATAKTL-VDGWMNTGDMGMINF 529
Query: 331 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 390
+ L L GRAKDT+VL GENVEP+ +E S I Q +VIGQDQ+
Sbjct: 530 KRT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESPYISQCMVIGQDQKNL 579
Query: 391 GAIIVPDKEEVLMAAKRLSIVHADASEL-SKEKTISLLYGELRKWTS-----KCSFQIGP 444
GAII+PD E++ AK I +D +L K + E++ + K Q+ P
Sbjct: 580 GAIIIPDFEKLGEWAKENGIDISDREKLIENPKIVDFYRKEIKNLNNAKNGFKSFEQVTP 639
Query: 445 IHVVDEPFTV 454
++ +PF V
Sbjct: 640 FFLITKPFEV 649
>gi|455792690|gb|EMF44430.1| AMP-binding enzyme [Leptospira interrogans serovar Lora str. TE
1992]
Length = 681
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 173/490 (35%), Positives = 258/490 (52%), Gaps = 70/490 (14%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I +D+ T +YTSGTTG PKGVML H N++HQ+ + ++ + G + LS+LP WHV+ER
Sbjct: 173 IHPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKAGARLLSILPIWHVFER 232
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 233 VVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPA 291
Query: 142 VARALIRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVAL 178
+ R L ++++ ++ K R +G + + P S+ L L
Sbjct: 292 LRRGLFKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVL 351
Query: 179 IDWLWARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGS 222
L A L+ P + +A +K+V KI++A G +A +SGGG+
Sbjct: 352 AGALGAYFAGTELYFLTSPFYTVAGLALVLNSFTLDKVVLAKIRAATGGQLEASISGGGA 411
Query: 223 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 282
LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N
Sbjct: 412 LPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNA 470
Query: 283 VLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 330
VL G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 471 VLTEIDESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINF 529
Query: 331 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 390
+ L L GRAKDT+VL GENVEP+ +E S+ I Q ++IGQDQ+
Sbjct: 530 KKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMIIGQDQKNL 579
Query: 391 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGP 444
GAI+VPD E++ AK I ++ +L + I LY + K +K F Q+ P
Sbjct: 580 GAIVVPDFEKLQEWAKENGINESNNEKLIENPKIYDLYRKEIKALNNTKNGFKSFEQVTP 639
Query: 445 IHVVDEPFTV 454
++ +PF V
Sbjct: 640 FILISKPFEV 649
>gi|386074346|ref|YP_005988663.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. IPAV]
gi|353458135|gb|AER02680.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. IPAV]
Length = 681
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 173/490 (35%), Positives = 257/490 (52%), Gaps = 70/490 (14%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I +D+ +YTSGTTG PKGVML H N++HQ+ + ++ + G + LS+LP WHV+ER
Sbjct: 173 IDPEDLFALIYTSGTTGLPKGVMLKHSNMMHQVNYVSPMLDIKAGARLLSILPIWHVFER 232
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 233 VVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPA 291
Query: 142 VARALIRISFAYTAFK----RIYEGFCLTRNQKQP--SY-----------------LVAL 178
+ R L ++++ ++ K R +G + + P S+ L L
Sbjct: 292 LRRGLFKLAYFFSRKKNQALRFLKGIEVDYTGRNPIVSFFYGILMFFQFLLTGPFTLTVL 351
Query: 179 IDWLWARIICAILW----PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGS 222
L A L+ P + +A +K+V KI++A G +A +SGGG+
Sbjct: 352 AGALGAYFAGTELYFLTSPFYTVAGLALVLNSFTLDKVVLAKIRAATGGQLEASISGGGA 411
Query: 223 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 282
LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N
Sbjct: 412 LPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNA 470
Query: 283 VLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 330
VL G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 471 VLTEIDESGNITQGKMGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINF 529
Query: 331 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 390
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 530 KKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNL 579
Query: 391 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGP 444
GAI+VPD E++ AK I ++ +L + I LY + K +K F Q+ P
Sbjct: 580 GAIVVPDFEKLQEWAKENGINESNNEKLIENPKIYDLYRKEIKALNNTKNGFKSFEQVTP 639
Query: 445 IHVVDEPFTV 454
++ +PF V
Sbjct: 640 FILISKPFEV 649
>gi|258404180|ref|YP_003196922.1| AMP-dependent synthetase and ligase [Desulfohalobium retbaense DSM
5692]
gi|257796407|gb|ACV67344.1| AMP-dependent synthetase and ligase [Desulfohalobium retbaense DSM
5692]
Length = 630
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 140/404 (34%), Positives = 234/404 (57%), Gaps = 14/404 (3%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+G DD+ T +YTSGTTG PKGV LTH N++H +++L D++ + D++LS+LP WH++ER
Sbjct: 176 VGGDDLVTIIYTSGTTGTPKGVKLTHANIMHNVQNLPDLIRLTSEDRWLSILPTWHIFER 235
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y SRG ++Y+++R DL+R++P + +VP ++E+LY + + S +
Sbjct: 236 TVEYVALSRGSCIVYSSIRTFAADLERFKPTLVATVPRIWESLYGKVNAALKKESPRKAR 295
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
+ + L+ +S ++ R G L R + +P + V L A L PL+ +A
Sbjct: 296 LFQFLVSVSSSFRLNSRRISG-RLPRFEHEPWWRV-LPRKARALACVVALAPLYAVARAK 353
Query: 202 VYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
+ + G + +SGGGSLP +D + +AIG+++ YG+TE SP IA R C
Sbjct: 354 LAPVKKKFGGRLRLAISGGGSLPPFLDEWIDAIGIRITNAYGMTECSPGIAGRGLDCRTF 413
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
G++G P +TE++I + EV P G++G ++VRG QV GY+ N A ++ DG+
Sbjct: 414 GTLGPPFPYTEVRIAGQDDIEV-PTGTEGEIQVRGPQVFHGYYHNNEANAESFTPDGFFR 472
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD+G + G LV+ GRAK+ IVL++GEN++P +E ++ V
Sbjct: 473 TGDLG----------KKTLNGELVITGRAKEIIVLASGENIDPTNIEATISTFPFVQDAV 522
Query: 382 VIGQDQRRPGAIIVPDKEEVLM-AAKRLSIVHADASELSKEKTI 424
++GQD++ GA+IVPD E++ A++ + V +A ++ ++K I
Sbjct: 523 LVGQDKKGLGALIVPDLEKLRQYVAEQYNHVVNEAGDVLQDKQI 566
>gi|336324216|ref|YP_004604183.1| long-chain-fatty-acid--CoA ligase [Flexistipes sinusarabici DSM
4947]
gi|336107797|gb|AEI15615.1| Long-chain-fatty-acid--CoA ligase [Flexistipes sinusarabici DSM
4947]
Length = 633
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 144/441 (32%), Positives = 242/441 (54%), Gaps = 28/441 (6%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD T +YTSGTTG PKGV+L+++N L + + D+V + D +LS+LP WH++ER
Sbjct: 182 DDPFTLIYTSGTTGTPKGVLLSNRNFLANLSRIPDMVDLSSDDVWLSILPSWHIFERLAE 241
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
+ +G +Y+ ++ DDL++Y P + +VP ++E LY+ + + S + +
Sbjct: 242 HLSVMQGCTTVYSNIKTFSDDLKKYSPTIVATVPRLWEALYTKVNATLKKESEKKAKIFN 301
Query: 145 ALIRISFAYTAFKRIYE----GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
L+ S AY KR+ + GF K+ + + A + +L P+ + A K
Sbjct: 302 LLVNASAAYRRNKRLLKNNLPGF------KKKGFFENIFSKGLALVKMILLKPVEMYAGK 355
Query: 201 LVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
+ G + VSGGGSLP +D + +AIG+++ YG+TE +P IA R C V
Sbjct: 356 KFVLLREKFGGRLRLAVSGGGSLPQFVDEWIDAIGIRIVTAYGMTECAPGIAGRDLHCEV 415
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
G++G PI +TEI+IVD + N +LPAG +G ++V+G QV GY+KN +++ EDG+
Sbjct: 416 FGTLGPPIKNTEIRIVDEDGN-ILPAGEEGEIQVKGEQVFSGYYKNEEENEKSFTEDGFF 474
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
TGD+G G LV+ GRAK+ IVL+ GEN++P ++E ++
Sbjct: 475 KTGDLGKFT----------LTGELVITGRAKEIIVLANGENIDPTKIESTISMFPFVKDA 524
Query: 381 VVIGQDQRRPGAIIVPDKEEV--LMAAKRLSIVHADASELSKEKTISLLYGELRKW-TSK 437
V++GQD++ GA+IVPD E++ ++ K ++H+ + + ++ K+ +SK
Sbjct: 525 VLVGQDKKGLGALIVPDFEQMKDYVSEKYNKLIHSKEDFTKDSYIVEKIRKDINKFLSSK 584
Query: 438 CSF----QIGPIHVVDEPFTV 454
F ++ I +D+ F +
Sbjct: 585 KGFRDYEKLHKISFLDKEFKL 605
>gi|187918016|ref|YP_001883579.1| long-chain-fatty-acid--CoA ligase [Borrelia hermsii DAH]
gi|119860864|gb|AAX16659.1| long-chain-fatty-acid--CoA ligase [Borrelia hermsii DAH]
Length = 631
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 152/458 (33%), Positives = 256/458 (55%), Gaps = 47/458 (10%)
Query: 19 YETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHV 78
+ I DD+AT +YTSGTTGNPKGVML+H N L+Q+ S ++ G F+ +LP WH
Sbjct: 171 FNNINPDDMATIIYTSGTTGNPKGVMLSHANFLYQVSSFSRMISTSEGQIFMCILPIWHS 230
Query: 79 YERACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
++R+ Y IF +G+ +++++ RN+ DD++ PHY+ +VP L+ I++ IF
Sbjct: 231 FQRSFSYNIFLKGMTCLFSSIVPRNMLDDIKNINPHYIAAVP----RLWIAIKQNIFKEV 286
Query: 137 AARRVVARALIRI--------SFAYTAFKRIY--EGFCLTRNQKQPSYLVALIDWLWARI 186
A + +AR L ++ Y +Y GF L K+ ++ L+
Sbjct: 287 AKKPFLARLLFKVFVKAACLNDICYRIISGLYPDNGFDLLMPMKKILGILGLV------- 339
Query: 187 ICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 245
IL+PL +L + +V+KKI+ +G + G++GGGS+ + + F+ +IG+++ YGLT
Sbjct: 340 ---ILFPLKILGDLIVFKKIKKVLGDNFVVGITGGGSMSLFVVRFFNSIGIELANAYGLT 396
Query: 246 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 305
E+SP +A+ +LG+ G + T +I D N++ G KG++ ++G QVM GY++
Sbjct: 397 EASPGVASDEHGKIMLGTCGKILPGTVAEIRDENGNKLKKPG-KGVLFIKGPQVMLGYYQ 455
Query: 306 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 365
+ AT+Q + +DG+LNTGDI ++ + V+ + GR KDTIVL+ GEN+EP
Sbjct: 456 DEDATRQVIGDDGFLNTGDIVKLSKDN----------VVRIIGREKDTIVLNNGENIEPA 505
Query: 366 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM----AAKRLSIVHADASELSKE 421
+E S LI + VV+GQDQ+ GA+I+P+ EE+ +++ H ++
Sbjct: 506 PIEIKLEESLLIEKAVVVGQDQKFLGALILPNFEEINKYLESMGQKIFDAHNRQQIIANN 565
Query: 422 KTISLLYGELRKWTSKCS-----FQIGPIHVVDEPFTV 454
+ + E+RK +K + QI ++++PF V
Sbjct: 566 IVLKAINDEIRKLINKANGFKPFEQILRFVLLEKPFEV 603
>gi|386347279|ref|YP_006045528.1| AMP-dependent synthetase and ligase [Spirochaeta thermophila DSM
6578]
gi|339412246|gb|AEJ61811.1| AMP-dependent synthetase and ligase [Spirochaeta thermophila DSM
6578]
Length = 630
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 150/385 (38%), Positives = 222/385 (57%), Gaps = 19/385 (4%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E + ++ +AT ++TSGTTG PKGVML+H N LHQ++ + ++ GD +LS+LP WH +
Sbjct: 177 EELPAEALATVIFTSGTTGLPKGVMLSHGNFLHQVKGVPILLKVGPGDIWLSVLPVWHSF 236
Query: 80 ERACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
ER Y S + Y+ R + D+ +P +M SVP ++E + GI + I S
Sbjct: 237 ERMMQYVALSSASAIAYSKPIGRIMLQDMATLKPTWMASVPRIWEGIRKGILQTIKKESP 296
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
+ + +A + + AY F + +G L R + +P ++D + I +LWP L
Sbjct: 297 LVQAIFQASLVVGRAYAFFTHMVKG-ELPRFKWRPR----ILDRVIGIIPFLLLWPFKQL 351
Query: 198 AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 256
A LV++K+ +G AG+SGGG+LP +D F++AI + V GYGLTE++PV+A R
Sbjct: 352 AHLLVFRKLHRKLGGRFVAGISGGGALPPEVDGFFDAIRITVLEGYGLTEAAPVLAVRSY 411
Query: 257 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 316
V +VG TEI+I D E N VLP G +G + RG QVM GY K P T++ LDE
Sbjct: 412 YHPVPHTVGPVFPDTEIQIRDEEGN-VLPPGRQGTIFARGGQVMLGYLKAPEETRKVLDE 470
Query: 317 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 376
+GWLNTGD+G + + L + GRAKDTIVL GENVEP LE+A L
Sbjct: 471 EGWLNTGDLGMLTWDNE----------LAITGRAKDTIVLRGGENVEPAPLEQALKEHPL 520
Query: 377 IRQIVVIGQDQRRPGAIIVPDKEEV 401
+ +V+GQD++ G +I D++ +
Sbjct: 521 VAHAMVVGQDEKYLGVLIFVDQDSL 545
>gi|449123801|ref|ZP_21760123.1| hypothetical protein HMPREF9723_00167 [Treponema denticola OTK]
gi|448944054|gb|EMB24936.1| hypothetical protein HMPREF9723_00167 [Treponema denticola OTK]
Length = 641
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 148/412 (35%), Positives = 230/412 (55%), Gaps = 19/412 (4%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E + +DD+A+ ++TSGTTGNPKGV ++H+N + Q+ L D + + G K +S+LP WH +
Sbjct: 186 ENVDTDDLASIIFTSGTTGNPKGVTMSHRNFMTQLLELPDRIILKPGQKAISVLPVWHSF 245
Query: 80 ERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
ERAC Y I G + Y+ L D+ + P SVP ++E +Y GI K +
Sbjct: 246 ERACEYVIIISGGTIAYSKPIGSILLADMLKINPTLFPSVPRIWEAVYDGIFKVMKKRGR 305
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
+ + + KR G C QK+ ++ ++ L ++C + P++ +
Sbjct: 306 PLYYLFLFFVDVGIKTMRLKRRVTGQC-PHFQKRSKFIYPILAIL--PLLC--IAPMYYI 360
Query: 198 AEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 256
+ L+Y+ I+ G KAGVSGGG+LP ++D F+ A+ + V GYG+TE++PVI+ R
Sbjct: 361 GDLLIYRTIRKKFGKCFKAGVSGGGALPPNVDEFFWAVRINVMEGYGITETAPVISVRPM 420
Query: 257 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 316
V G++G P+ E KI+D NE LP KG++ V+G V +GY+K+P T + +D+
Sbjct: 421 PRPVFGTLGKPLACFESKIIDKNGNE-LPHNRKGLLLVKGDAVTKGYYKDPERTAEVIDK 479
Query: 317 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 376
DGW +TGD+ + G L+L+GR K+TIVL GEN+EP+ +E S L
Sbjct: 480 DGWFDTGDLAI----------KTIDGELILKGRRKNTIVLRGGENIEPVPIEVKLQESPL 529
Query: 377 IRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
I VV+GQDQR GA+IV KE + A + + SEL + + +Y
Sbjct: 530 ISIAVVLGQDQRSLGALIVVHKENLQAWAANNGLRNVPVSELVHDSNVQKMY 581
>gi|325971583|ref|YP_004247774.1| long-chain-fatty-acid--CoA ligase [Sphaerochaeta globus str. Buddy]
gi|324026821|gb|ADY13580.1| Long-chain-fatty-acid--CoA ligase [Sphaerochaeta globus str. Buddy]
Length = 639
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 153/389 (39%), Positives = 230/389 (59%), Gaps = 37/389 (9%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV----PAENGDKFLSMLPPWHVYE 80
D++AT ++TSGTTG+PKGVMLTHKN +Q+ ++ ++ PA+ ++LS+LP WH +E
Sbjct: 189 DEVATIIFTSGTTGDPKGVMLTHKNFAYQLEAVPKLIQKFAPAQ---RWLSVLPVWHSFE 245
Query: 81 RACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
R Y I S + Y+ L DL PH+M SVP ++E + +G+ F S
Sbjct: 246 RILQYVIISNASTIAYSKPLGSILLADLAVVNPHWMGSVPRIWEAVKAGV----FASMKN 301
Query: 139 RRVVARAL----IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 194
+ +A+ L ++I+ Y+ K + G T ++ ++D L + + +L+PL
Sbjct: 302 KSPIAKGLFAFFVQIARLYSHNKDLLLGEVATFQKRN-----RVLDVLVSFLPTVLLYPL 356
Query: 195 HLLAEKLVYKKIQSAIGISK-AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 253
+ L KLV+ K++ +G + AGVSGGGSL +DLF+ +IG+K+ GYGLTES+PV+A
Sbjct: 357 YKLGNKLVFSKVKHKLGKNFIAGVSGGGSLSEGVDLFFASIGIKLLDGYGLTESAPVVAV 416
Query: 254 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 313
R P + + + TE++IVD EV P G KG+++VRG QVM+GY+K T +
Sbjct: 417 R-PLSHGVKRTITALEGTEVRIVDETGIEVKP-GQKGVIQVRGPQVMKGYYKRQDLTDRV 474
Query: 314 LDEDGWLNTGDIG-WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
L +DGWL+TGD+G W G + GRAKDTIVLS GEN+EP+ +E
Sbjct: 475 LSKDGWLDTGDLGMWTHK-----------GEFAIRGRAKDTIVLSGGENLEPVPIEAKLC 523
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEV 401
S I VV+GQDQ+ GA+IV +K+ +
Sbjct: 524 ESEFIESAVVLGQDQKYLGALIVLNKKRI 552
>gi|408792234|ref|ZP_11203844.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408463644|gb|EKJ87369.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 682
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 167/488 (34%), Positives = 258/488 (52%), Gaps = 66/488 (13%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY-DIVPAENGDKFLSMLPPWHVYE 80
I DD+ T +YTSGTTG PKGVML H N++HQ+ + + D+ LS+LP WH++E
Sbjct: 176 IKPDDLYTLIYTSGTTGMPKGVMLMHSNMIHQMHYVVPRVAKVSPDDRMLSILPVWHIFE 235
Query: 81 RACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT---SSA 137
R YF G YT V L++D+Q+ +P +M S P V+E++Y+GI +I +
Sbjct: 236 RVVEYFAIINGGSTYYTKVTELRNDIQKARPTFMASAPRVWESIYNGIYTRINDPKQTPP 295
Query: 138 ARRVVARALIRISFAYTAFKRI-------YEG-----------FCLTRNQKQPSYLVALI 179
RR + + S Y A R YEG F + + + V+++
Sbjct: 296 VRRFLFKVAYFFSKHYHAAVRFLKGWEVDYEGRNIIQSLGLSLFSIIKLLLTGPFTVSIL 355
Query: 180 DWLWARII----CAILWPLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSL 223
L + + + PL+++A +++V KI+ A G +A +SGGG+L
Sbjct: 356 SILAVQFVLPEESSFKTPLYVVAGLGVLFNSFTLDRIVLAKIRQATGGHLRATLSGGGAL 415
Query: 224 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI-------- 275
H+D F+ IG+ V GYG+TE+ PVI+AR ++GSVG + ++++I
Sbjct: 416 QKHVDAFFMDIGITVLEGYGMTETGPVISARTFDRPIMGSVGDIVPLSQVQIRDDAGNVL 475
Query: 276 --VDAETNEVL-PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHH 332
+D + N + G KG+V ++G QVM+GY+KNP TK+ + D W+NTGDIG I
Sbjct: 476 CHIDDKKNIIFGKLGVKGVVHIKGPQVMKGYYKNPETTKKTI-VDNWMNTGDIGMI---- 530
Query: 333 SRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 392
L L GRAKDTIVL GENVEP+ +E S+ I+Q +++GQDQ+ GA
Sbjct: 531 ------NFKKTLTLTGRAKDTIVLLGGENVEPVPIENKIDESTYIKQSMIVGQDQKVLGA 584
Query: 393 IIVPDKEEVLMAAKRLSIVHADASEL-SKEKTISLLYGELRKWTS-KCSF----QIGPIH 446
IIVPD + ++ A+ I + +L + K + E+R + S K F Q+ +
Sbjct: 585 IIVPDFDALIPWAEENGISEKNPEKLITNPKVVDFYKKEVRNFNSVKTGFKNFEQVQYVT 644
Query: 447 VVDEPFTV 454
++ +PF V
Sbjct: 645 LITKPFEV 652
>gi|333996558|ref|YP_004529170.1| AMP-binding domain-containing protein [Treponema primitia ZAS-2]
gi|333740669|gb|AEF86159.1| AMP-binding enzyme family protein [Treponema primitia ZAS-2]
Length = 637
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 149/406 (36%), Positives = 232/406 (57%), Gaps = 19/406 (4%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+D+AT ++TSGTTG PKGVMLTH+N L Q S + + GD +LS+LP WHV+ER+
Sbjct: 185 EDLATIIFTSGTTGIPKGVMLTHRNFLVQQPSFRLVFETKTGDIWLSVLPVWHVFERSIE 244
Query: 85 YFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y IF G + Y+ + L D Q +P +M+SVP V+E++ + + +
Sbjct: 245 YVIFYLGNGIAYSKPISSVLLPDFQNIRPQWMVSVPRVWESIMDWTNRNVKQQGWFWKNW 304
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
+ + Y F+ + G L + L A+I + ++C P LA LV
Sbjct: 305 FNFFVNLGIMYNYFRDLTFGL-LPNFHGRIRVLDAIIGFFPWVLLC----PARGLAWLLV 359
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
+++++ +G +AG+SGGGSLP+ +DLF+ A+G+++Q GYGLTE+SP++A RR
Sbjct: 360 FRRVKKRLGGRFRAGISGGGSLPVKVDLFFNAVGLRLQEGYGLTETSPIVAVRRYKAARR 419
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
+VG + TE +IVD + +L G+ G ++VRG QVM+GY++ P T + L +DGW+
Sbjct: 420 NTVGQVLLDTECRIVDNK-GAILQPGNNGHLQVRGGQVMKGYYRKPEETAKVLFDDGWIE 478
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGDI + + + + GRAKDTIVL GENVEP+ +E S + Q +
Sbjct: 479 TGDIAMMTYDNE----------VRITGRAKDTIVLRGGENVEPIPIELKIQESPWVAQCM 528
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLL 427
V+GQDQ+ A+IVP +E ++ A+ +I D L ++ I+ L
Sbjct: 529 VVGQDQKYLAALIVPVQEAIMGFAEENNIPIVDYDLLLQQPEINEL 574
>gi|398336768|ref|ZP_10521473.1| long-chain-fatty-acid CoA ligase [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 681
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 172/490 (35%), Positives = 257/490 (52%), Gaps = 70/490 (14%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I +D+ T +YTSGTTG PKGVML H N++HQ+ ++ ++ + + LS+LP WHV+ER
Sbjct: 173 IQPEDLFTLIYTSGTTGLPKGVMLKHSNMMHQVNNVSPMLKIKADARLLSILPIWHVFER 232
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y G YT VR+L+ DL +P +M S P ++E +Y+GI +I A
Sbjct: 233 VVEYVCIGLGAATYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPAQTPA 291
Query: 142 VARALIRISFAYTAFK----RIYEGF---CLTRNQ----------------KQPSYLVAL 178
+ R L ++++ +++ K R +G + RN P L L
Sbjct: 292 LRRGLFKLAYFFSSKKNQAVRFLKGIEVDYIGRNPIGSLFYGILMFVQLLLTGPFTLTVL 351
Query: 179 IDWLWA-------RIICAILWPLHLLA--------EKLVYKKIQSAIGIS-KAGVSGGGS 222
L A + + L+ + LA +++V KI++A G KA +SGGG+
Sbjct: 352 AGALGAYFAGTELHFLTSPLYTISGLAVLLNSFTLDRIVLAKIRAATGGQLKASISGGGA 411
Query: 223 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 282
LP H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + T ++I + + N
Sbjct: 412 LPRHVDEFFGNIGINVLEGYGMTETSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNG 470
Query: 283 VLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 330
VL G KG+V ++G QVM+GYFKN AT +A+ DGW+NTGD+G I
Sbjct: 471 VLTEIDETGNITQGKLGLKGVVFIKGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINF 529
Query: 331 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 390
+ L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+
Sbjct: 530 KKT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNL 579
Query: 391 GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW--TSKCSF----QIGP 444
GAI+VPD E++ AK + +L + + LY + K +K F Q+ P
Sbjct: 580 GAIVVPDFEKLQEWAKENGVNETSNEKLIENPKVYDLYRKEIKALNNTKNGFKSFEQVTP 639
Query: 445 IHVVDEPFTV 454
++ +PF V
Sbjct: 640 FILIAKPFEV 649
>gi|42527248|ref|NP_972346.1| AMP-binding protein [Treponema denticola ATCC 35405]
gi|41817672|gb|AAS12257.1| AMP-binding enzyme family protein [Treponema denticola ATCC 35405]
Length = 641
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 151/414 (36%), Positives = 227/414 (54%), Gaps = 23/414 (5%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E + +DD+A+ ++TSGTTGNPKGV +TH+N + Q+ L D + + G K +S+LP WH +
Sbjct: 186 ENVDTDDLASIIFTSGTTGNPKGVTMTHRNFMTQLMELPDRIILKPGQKAISVLPVWHSF 245
Query: 80 ERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
ERAC Y I G + Y+ L D+ + P SVP ++E +Y GI K +
Sbjct: 246 ERACEYVIIISGGTIAYSKPIGSVLLADMVKINPTLFPSVPRIWEAVYDGIFKAMKKRGR 305
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFC--LTRNQKQPSYLVALIDWLWARIICAILWPLH 195
+ I + KR G C R K ++A++ L C + PL+
Sbjct: 306 PLYYLFLFFIEVGIKTMRLKRRVTGQCPHFQRKTKVIYPILAVLPLL-----C--IAPLY 358
Query: 196 LLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
+ + L+Y+ I+ G +AGVSGGG+LP ++D F+ AI + V GYG+TE++PVI+ R
Sbjct: 359 YIGDLLIYRAIRKKFGKCFRAGVSGGGALPPNVDEFFWAIRINVMEGYGITETAPVISVR 418
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
V G++G P+ E KI+D E LP KG++ VRG V +GY+K+P T + +
Sbjct: 419 PMPKPVFGTLGKPLACFESKIIDKNGKE-LPHNRKGLLLVRGDAVTKGYYKDPERTAEVI 477
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
D+DGW +TGD+ + G L+L+GR K+TIVL GEN+EP+ +E S
Sbjct: 478 DKDGWFDTGDLAI----------KTVDGELILKGRKKNTIVLRGGENIEPVPIEVKLQES 527
Query: 375 SLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
LI VV+GQDQR GA+IV KE + A + + +EL + + +Y
Sbjct: 528 PLISLAVVLGQDQRSLGALIVVHKENLQSWAANNGLRNVPVTELIHDSNVQKMY 581
>gi|333993405|ref|YP_004526018.1| long-chain-fatty-acid--CoA ligase [Treponema azotonutricium ZAS-9]
gi|333737141|gb|AEF83090.1| long-chain-fatty-acid--CoA ligase [Treponema azotonutricium ZAS-9]
Length = 644
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 151/404 (37%), Positives = 228/404 (56%), Gaps = 20/404 (4%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD T ++TSGTTG PKGVMLTHK L Q+ + + + G+ +LS+LP WHV+ERA
Sbjct: 193 DDTVTVIFTSGTTGEPKGVMLTHKTFLCQVPRFHLVFDTKPGEIWLSVLPVWHVFERAIE 252
Query: 85 YFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y + Y+ + L D +PH+M++VP V+E + GI + + +
Sbjct: 253 YVALYHKNAIAYSKPISSVLMADFANIKPHWMVAVPRVWEAVMDGIYRSVKLMGKFQEFF 312
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
+ Y F+ + G + + V +D + +L P+ LA +V
Sbjct: 313 FNFFVSFGLMYAYFRDLAFGLIPNFHGR-----VRAVDAVLGFFPWLLLAPVRGLAYLIV 367
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
+++++ +G +AG+SGGG+LP +D F+ A+G+++Q GYGLTE+SP+++ R+ +
Sbjct: 368 FRRLKLRLGGRFRAGISGGGALPARVDHFFNAVGLRLQEGYGLTETSPIVSVRQYRKSRR 427
Query: 262 GSVGH-PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
G++G ++ TE +I+D + E LP GS GI+ VRG QVM+GY+K P T + L DGWL
Sbjct: 428 GTIGQILVDDTEFRILDDKGRE-LPPGSSGILYVRGPQVMKGYYKKPELTAEVLSADGWL 486
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
NTGDI H+R G L L GRAKDTIVL GENVEP+ +E S I Q
Sbjct: 487 NTGDIA----MHTR------DGELRLTGRAKDTIVLRGGENVEPVPIENKLKESPRIGQC 536
Query: 381 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 424
VV+GQDQ+ A+IVP ++ V+ A+ +I D L ++ I
Sbjct: 537 VVLGQDQKYLAALIVPVQDAVMAFAEENNIPIVDYELLLQQPEI 580
>gi|449111695|ref|ZP_21748264.1| hypothetical protein HMPREF9735_01313 [Treponema denticola ATCC
33521]
gi|449113498|ref|ZP_21750003.1| hypothetical protein HMPREF9721_00521 [Treponema denticola ATCC
35404]
gi|448956966|gb|EMB37719.1| hypothetical protein HMPREF9735_01313 [Treponema denticola ATCC
33521]
gi|448959708|gb|EMB40427.1| hypothetical protein HMPREF9721_00521 [Treponema denticola ATCC
35404]
Length = 616
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 150/414 (36%), Positives = 228/414 (55%), Gaps = 23/414 (5%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E + +DD+A+ ++TSGTTGNPKGV +TH+N + Q+ L D + + G K +S+LP WH +
Sbjct: 161 ENVDTDDLASIIFTSGTTGNPKGVTMTHRNFMTQLMELPDRIILKPGQKAISVLPVWHSF 220
Query: 80 ERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
ERAC Y I G + Y+ L D+ + P SVP ++E +Y GI K +
Sbjct: 221 ERACEYVIIISGGTIAYSKPIGSVLLADMVKINPTLFPSVPRIWEAVYDGIFKAMKKRGR 280
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFC--LTRNQKQPSYLVALIDWLWARIICAILWPLH 195
+ I + KR G C R K ++A++ ++C + PL+
Sbjct: 281 PLYYLFLFFIEVGIKTMRLKRRVTGQCPHFQRKTKVIYPILAVLP-----LLC--IAPLY 333
Query: 196 LLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
+ + L+Y+ I+ G +AGVSGGG+LP ++D F+ AI + V GYG+TE++PVI+ R
Sbjct: 334 YIGDLLIYRAIRKKFGKCFRAGVSGGGALPPNVDEFFWAIRINVMEGYGITETAPVISVR 393
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
V G++G P+ E KI+D E LP KG++ VRG V +GY+K+P T + +
Sbjct: 394 PMPKPVFGTLGKPLACFESKIIDKNGKE-LPHNRKGLLLVRGDAVTKGYYKDPERTAEVI 452
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
D+DGW +TGD+ + G L+L+GR K+TIVL GEN+EP+ +E S
Sbjct: 453 DKDGWFDTGDLAI----------KTVDGELILKGRKKNTIVLRGGENIEPVPIEVKLQES 502
Query: 375 SLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
LI VV+GQDQR GA+IV KE + A + + +EL + + +Y
Sbjct: 503 PLISLAVVLGQDQRSLGALIVVHKENLQSWAANNGLRNVPVTELIHDSNVQKMY 556
>gi|449107587|ref|ZP_21744240.1| hypothetical protein HMPREF9729_02505 [Treponema denticola ASLM]
gi|451969280|ref|ZP_21922509.1| hypothetical protein HMPREF9728_01703 [Treponema denticola US-Trep]
gi|448961541|gb|EMB42241.1| hypothetical protein HMPREF9729_02505 [Treponema denticola ASLM]
gi|451701884|gb|EMD56329.1| hypothetical protein HMPREF9728_01703 [Treponema denticola US-Trep]
Length = 616
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 150/414 (36%), Positives = 228/414 (55%), Gaps = 23/414 (5%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E + +DD+A+ ++TSGTTGNPKGV +TH+N + Q+ L D + + G K +S+LP WH +
Sbjct: 161 ENVDTDDLASIIFTSGTTGNPKGVTMTHRNFMTQLMELPDRIILKPGQKAISVLPVWHSF 220
Query: 80 ERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
ERAC Y I G + Y+ L D+ + P SVP ++E +Y GI K +
Sbjct: 221 ERACEYVIIISGGTIAYSKPIGSVLLADMVKINPTLFPSVPRIWEAVYGGIFKAMKKRGR 280
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFC--LTRNQKQPSYLVALIDWLWARIICAILWPLH 195
+ I + KR G C R K ++A++ ++C + PL+
Sbjct: 281 PLYYLFLFFIEVGIKTMRLKRRVTGQCPHFQRKTKVIYPILAVLP-----LLC--IAPLY 333
Query: 196 LLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
+ + L+Y+ I+ G +AGVSGGG+LP ++D F+ AI + V GYG+TE++PVI+ R
Sbjct: 334 YIGDLLIYRAIRKKFGKCFRAGVSGGGALPPNVDEFFWAIRINVMEGYGITETAPVISVR 393
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
V G++G P+ E KI+D E LP KG++ VRG V +GY+K+P T + +
Sbjct: 394 PMPKPVFGTLGKPLACFESKIIDKNGKE-LPHNRKGLLLVRGDAVTKGYYKDPERTAEVI 452
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
D+DGW +TGD+ + G L+L+GR K+TIVL GEN+EP+ +E S
Sbjct: 453 DKDGWFDTGDLAI----------KTVDGELILKGRKKNTIVLRGGENIEPVPIEVKLQES 502
Query: 375 SLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
LI VV+GQDQR GA+IV KE + A + + +EL + + +Y
Sbjct: 503 PLISLAVVLGQDQRSLGALIVVHKENLQSWAANNGLRNVPVTELIHDSNVQKMY 556
>gi|398346500|ref|ZP_10531203.1| long-chain-fatty-acid--CoA ligase [Leptospira broomii str. 5399]
Length = 685
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 170/493 (34%), Positives = 253/493 (51%), Gaps = 72/493 (14%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 80
++ SDD+ T +YTSGTTG PKGV LTH N++ Q+RS+ I+ D+ +S+LP WH++E
Sbjct: 171 SLKSDDLFTIIYTSGTTGQPKGVQLTHSNMIFQVRSVSPILEITEKDRAISILPIWHIFE 230
Query: 81 RACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
R Y G Y+ V++LK +L ++P + + P V+E + +GI ++ R
Sbjct: 231 RFLEYCFLHVGGTTYYSNVQDLKQNLTDFKPTFFGAAPRVWEMICNGILARMTDPDRTSR 290
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRN---QKQPSYLVAL------IDWLW-------- 183
+ R L ++++ Y+ K + F L + + S+ L ++L+
Sbjct: 291 L-GRILFKLAYTYSEKKNEAKAFFLGNELDLKGRSSFATFLKGLRMAFEYLFFGPFTLSA 349
Query: 184 ARIICAILWPLHLLAE----------------------KLVYKKIQSAI--GISKAGVSG 219
+CA L P AE +LV KI+ I G K VSG
Sbjct: 350 ISFLCAALIPFGYAAEEIKILLYTIGVIGLLFNSFMLDQLVLSKIRKDIVGGFLKTSVSG 409
Query: 220 GGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAE 279
GG+LP +D +G+++ GYG+TE+SPVI+ RR V+GSVGH + T ++I E
Sbjct: 410 GGALPNRVDRTLNHLGIRLLEGYGMTETSPVISIRRTDKFVIGSVGHILPKTRLQI-RTE 468
Query: 280 TNEVLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGW 327
NEVL G KG+V G +M+GY+KNP T AL+ GW+NTGDIG
Sbjct: 469 KNEVLSEIDENGKFTKGKPGQKGVVFASGPHIMKGYYKNPDITADALNA-GWMNTGDIGI 527
Query: 328 IAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQ 387
++ + + L L GRAK+TIVL GENVEP+ +E S I Q +VIGQDQ
Sbjct: 528 VSYNRT----------LTLAGRAKETIVLRGGENVEPVPIEAKLQVSKYISQCMVIGQDQ 577
Query: 388 RRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGELRKWTS-----KCSFQ 441
+ GAIIVPD E ++ AK I V + L + + I L E++ + K Q
Sbjct: 578 KNLGAIIVPDFESLIGWAKENYIPVDSIQELLQRRQVIDLYRSEIKALNNARSGFKSFEQ 637
Query: 442 IGPIHVVDEPFTV 454
+ P ++ +PF V
Sbjct: 638 VTPFLLIVKPFEV 650
>gi|449102428|ref|ZP_21739177.1| hypothetical protein HMPREF9730_00074 [Treponema denticola AL-2]
gi|448966400|gb|EMB47056.1| hypothetical protein HMPREF9730_00074 [Treponema denticola AL-2]
Length = 616
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 150/414 (36%), Positives = 228/414 (55%), Gaps = 23/414 (5%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E + +DD+A+ ++TSGTTGNPKGV +TH+N + Q+ L D + + G K +S+LP WH +
Sbjct: 161 ENVDTDDLASIIFTSGTTGNPKGVTMTHRNFMTQLMELPDRIILKPGQKAISVLPVWHSF 220
Query: 80 ERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
ERAC Y I G + Y+ L D+ + P SVP ++E +Y GI K +
Sbjct: 221 ERACEYVIIISGGTIAYSKPIGSVLLADMVKINPTLFPSVPRIWEAVYDGIFKAMKKRGR 280
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFC--LTRNQKQPSYLVALIDWLWARIICAILWPLH 195
+ I + KR G C R K ++A++ ++C + PL+
Sbjct: 281 PLYYLFLFFIEVGIKTMRLKRRVTGQCPHFQRKTKVIYPILAVLP-----LLC--IAPLY 333
Query: 196 LLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
+ + L+Y+ I+ G +AGVSGGG+LP ++D F+ AI + V GYG+TE++PVI+ R
Sbjct: 334 YIGDLLIYRAIRKKFGKCFRAGVSGGGALPPNVDEFFWAIRINVMEGYGITETAPVISVR 393
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
V G++G P+ E KI+D E LP KG++ VRG V +GY+K+P T + +
Sbjct: 394 PMPKPVFGTLGKPLACFESKIIDKNGKE-LPHNRKGLLLVRGDAVTKGYYKDPERTAEVI 452
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
D+DGW +TGD+ + G L+L+GR K+TIVL GEN+EP+ +E S
Sbjct: 453 DKDGWFDTGDLAI----------KTVDGELILKGRKKNTIVLRGGENIEPVPIEVKLQES 502
Query: 375 SLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
LI VV+GQDQR GA+IV KE + A + + +EL + + +Y
Sbjct: 503 PLISIAVVLGQDQRSLGALIVVHKENLQSWAANNGLRNVPVTELIHDSNVQKMY 556
>gi|422342229|ref|ZP_16423169.1| AMP-binding enzyme family protein [Treponema denticola F0402]
gi|325474297|gb|EGC77485.1| AMP-binding enzyme family protein [Treponema denticola F0402]
Length = 641
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 151/414 (36%), Positives = 227/414 (54%), Gaps = 23/414 (5%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E + +DD+A+ ++TSGTTGNPKGV +TH+N + Q+ L D + + G K +S+LP WH +
Sbjct: 186 ENVDTDDLASIIFTSGTTGNPKGVTMTHRNFMTQLMELPDRIILKPGQKAISVLPVWHSF 245
Query: 80 ERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
ERAC Y I G + Y+ L D+ + P SVP ++E +Y GI K +
Sbjct: 246 ERACEYVIIISGGTIAYSKPIGSVLLADMVKINPTLFPSVPRIWEAVYDGIFKAMKKRGR 305
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFC--LTRNQKQPSYLVALIDWLWARIICAILWPLH 195
+ I + KR G C R K ++A++ L C + PL+
Sbjct: 306 PLYYLFLFFIEVGIKTMRLKRRVTGQCPHFQRKTKVIYPILAVLPLL-----C--IAPLY 358
Query: 196 LLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
+ + L+Y+ I+ G +AGVSGGG+LP ++D F+ AI + V GYG+TE++PVI+ R
Sbjct: 359 YIGDLLIYRAIRKKFGKCFRAGVSGGGALPPNVDEFFWAIRINVMEGYGITETAPVISVR 418
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
V G++G P+ E KI+D E LP KG++ VRG V +GY+K+P T + +
Sbjct: 419 PMPKPVFGTLGKPLACFESKIIDKNGKE-LPHNRKGLLLVRGDAVTKGYYKDPERTAEVI 477
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
D+DGW +TGD+ + G L+L+GR K+TIVL GEN+EP+ +E S
Sbjct: 478 DKDGWFDTGDLAI----------KTVDGELILKGRKKNTIVLRGGENIEPVPIEVKLQES 527
Query: 375 SLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
LI VV+GQDQR GA+IV KE + A + + +EL + + +Y
Sbjct: 528 PLISIAVVLGQDQRSLGALIVVHKENLQSWAANNGLRNVPVTELIHDSNVQKMY 581
>gi|51245185|ref|YP_065069.1| long-chain-fatty-acid--CoA ligase [Desulfotalea psychrophila LSv54]
gi|50876222|emb|CAG36062.1| related to long-chain-fatty-acid--CoA ligase [Desulfotalea
psychrophila LSv54]
Length = 649
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 151/411 (36%), Positives = 232/411 (56%), Gaps = 19/411 (4%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD T +YTSGTTG PKGV L++KN++H + L I+ D +LS+LP WH++ER
Sbjct: 198 DDFVTIIYTSGTTGVPKGVQLSNKNIMHNVDCLPGIIRLTEEDLWLSILPSWHIFERTAE 257
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
Y + G L+Y+ VR L DL+RY+P + +VP V+E+LYS + + A +
Sbjct: 258 YVALAAGTTLVYSTVRTLVQDLERYKPTLLATVPRVWESLYSKVDSGVRKKGAMAYRIFT 317
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQ--KQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
+LI S Y +R + L R +P+ LV A + L+ +L AEK +
Sbjct: 318 SLIWCSSTYRRNRREF----LDRLPVFAKPNSLVRFGQKGVALVKMLFLYLPYLFAEKKL 373
Query: 203 YKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
Q G + +SGGGSL +++ + +A+G+++ YG+TE SP IA R C V G
Sbjct: 374 NVVRQRFGGRLRLAISGGGSLADYLEEWVDAVGIRIVNAYGMTECSPAIAGRGLDCRVYG 433
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
+VG + +T I++VD + EV G +G+++V G QVM GY+KN ++ +DG+ T
Sbjct: 434 TVGAGVTNTRIRLVDDDGLEV-SQGKEGLIEVVGDQVMGGYYKNDVGNIESFTDDGFFRT 492
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD+G R G LVL GRAKD IVLS+GEN++P +E A ++ ++
Sbjct: 493 GDLG----------RRTISGDLVLTGRAKDIIVLSSGENIDPSRIESAISVFPFVQDAIL 542
Query: 383 IGQDQRRPGAIIVPDKEEVL-MAAKRLSIVHADASELSKE-KTISLLYGEL 431
+GQD++ GA++V D+EE+L A R S + + EL K+ K + L+ E+
Sbjct: 543 VGQDKKGLGALLVADREELLKYADSRFSHLRKASQELLKDNKVLELIRKEM 593
>gi|398334342|ref|ZP_10519047.1| long-chain-fatty-acid--CoA ligase [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 583
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 150/406 (36%), Positives = 229/406 (56%), Gaps = 23/406 (5%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENG--DKFLSMLPPWHVY 79
I DD+ T +YTSGTTG PKGVMLTH N++ Q+R+ +P E G D+FLS+LP WH +
Sbjct: 181 IRPDDLFTIIYTSGTTGEPKGVMLTHANMISQLRN----IPIEIGPKDRFLSILPVWHSF 236
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ER + G YT +RN+K+DL +P +M S P ++E ++ GIQ +I + S +
Sbjct: 237 ERVFQMGTIATGAGQYYTNIRNIKEDLLIVKPTFMASAPRLWENIFHGIQSKIQSGSTLK 296
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
R++ ++ + ++G L + + L +L + + + I +++ +
Sbjct: 297 RILFKSAYFCALKVQRALNFFKGNELDLEGR--NILKSLCMFGQSVLNIVIFSIPYMILD 354
Query: 200 KLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
+V KKI+ A G G VSGGG+LP HID F+ IG+ + GYGLTE+SP +A R P
Sbjct: 355 LIVLKKIRQATGGKLRGTVSGGGALPFHIDEFFNVIGIPLFEGYGLTETSPGLAFRTPDH 414
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVL---PAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
V+GSVG EI + D E +L G KG V VRG Q+M+GY+K P T + +
Sbjct: 415 LVIGSVGPLFPEVEILLKDVENGNILYPPQKGVKGEVHVRGPQIMKGYYKRPDVTAKVI- 473
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
+DGW NTGD+G I +++ L + GR K+T+VL GEN+EP+ +E +S
Sbjct: 474 QDGWFNTGDLGLITYNNT----------LKIVGRTKETVVLLNGENIEPVPIENKLAQSP 523
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 421
I Q++V+GQDQ+ A+++P + L + LS ++ K
Sbjct: 524 FIDQVMVVGQDQKFLTALVLPVLDRFLGLRENLSGTRGESDRERKN 569
>gi|398343962|ref|ZP_10528665.1| long-chain-fatty-acid CoA ligase [Leptospira inadai serovar Lyme
str. 10]
Length = 685
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 176/498 (35%), Positives = 259/498 (52%), Gaps = 72/498 (14%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE----NGDKFLSML 73
+ E I DD+ T +YTSGTTG PKGVML H N++HQ+ + ++ + + D LS+L
Sbjct: 171 RIEAIKPDDLFTLIYTSGTTGMPKGVMLMHSNMIHQMEHVVPLILKKSMIKDDDSMLSIL 230
Query: 74 PPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 133
P WH++ER Y S GI YT V +L++DL + +P +M S P V+E++Y+GI +I
Sbjct: 231 PVWHIFERVVEYSAISLGIATFYTKVSDLRNDLAKAKPSFMASAPRVWESIYTGIYNRIN 290
Query: 134 T---SSAARRVVARALIRISFAYTAFKRI-------YEG------FCL-----TRNQKQP 172
+ R+ + S Y A R YEG F L R
Sbjct: 291 DPKQTPPVRKFLFNTAYLFSKNYHAAIRFLSGREVDYEGRNIIQSFVLGVQAVIRLVLTG 350
Query: 173 SYLVALI---DWLWAR-------IICAILWPLHLLA--------EKLVYKKIQSAIGISK 214
+ V+LI + + + +I +L + +L + +V KI+ A G
Sbjct: 351 PFTVSLIAGASYFYIKTAHPNLPLIPGLLLAVAILGLIFNYKTLDAIVLSKIRQATGGRL 410
Query: 215 AG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEI 273
G +SGGG+L H+D F+ IG+ V GYG+TE++PVI+ R ++GSVG+ + TE+
Sbjct: 411 RGTLSGGGALQRHVDNFFNDIGLLVLEGYGMTETAPVISVRHFDYPIIGSVGYVVPKTEL 470
Query: 274 KIVD---------AETNEVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
+I D + EVL G KG+V ++G QVM+GY+KNP ATK+ + DGW+NT
Sbjct: 471 QIRDDSGKVLTHINDNKEVLAGRIGLKGVVHIKGPQVMKGYYKNPEATKKTI-SDGWINT 529
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GDIG+I L L GRAKDT+VL GENVEP+ +E S I+Q +V
Sbjct: 530 GDIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPYIKQSMV 579
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL-SKEKTISLLYGELRKWTS-KCSF 440
GQDQ+ GAIIVPD E + + I D +L K + E+R++ S K F
Sbjct: 580 FGQDQKVLGAIIVPDFENLKPWLEENGISARDIKDLIDHPKVLEFYKKEVREYNSTKEGF 639
Query: 441 Q----IGPIHVVDEPFTV 454
+ + I + +PF +
Sbjct: 640 KSFELVQHIVIASKPFEI 657
>gi|254443628|ref|ZP_05057104.1| AMP-binding enzyme, putative [Verrucomicrobiae bacterium DG1235]
gi|198257936|gb|EDY82244.1| AMP-binding enzyme, putative [Verrucomicrobiae bacterium DG1235]
Length = 638
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 166/454 (36%), Positives = 243/454 (53%), Gaps = 45/454 (9%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I DD+ T +YTSGTTG PKGV LTH N+ Q+R+L + E D+ LS+LP WH YER
Sbjct: 180 IRPDDLFTLIYTSGTTGTPKGVQLTHSNMASQVRNLPFCL--EQDDRMLSILPVWHSYER 237
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
S G +T++R + DDL+ +P M S P ++E LY I K + S RR
Sbjct: 238 VFHMIAVSNGCCTYFTSLRTIADDLKTVKPTIMASAPRLWENLYLRIMKNVKESHWIRRG 297
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL-----WPLHL 196
+ RA AY + R+ +G +K+ I +++ + PL++
Sbjct: 298 LFRA------AYFS-SRMVKGSTFFFQRKEMDLTGRSIGETLGKVLSGVFKIMLFLPLYV 350
Query: 197 LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
+V +K++ +G S K VSGGG+L H+D F+ IGV V+ GYGLTE+SPV A R
Sbjct: 351 ALNAVVLEKLRQIVGGSFKGTVSGGGALQPHVDEFFNYIGVPVKEGYGLTETSPVAAVRT 410
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVL---------PAGSKGIVKVRGSQVMQGYFKN 306
V+G+VG TE++I+D T E+L G KG + ++G QVM+GY+KN
Sbjct: 411 VPKLVIGTVGPLYPETELRILDLNTGEILYPNTKYRANGRGQKGEIHLKGPQVMKGYYKN 470
Query: 307 PSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLE 366
P AT + L E GW NTGDIG L + GR+KDTIVL GEN+EP+
Sbjct: 471 PEATDRVLKE-GWFNTGDIGMYT----------FNDCLKIMGRSKDTIVLLNGENLEPIP 519
Query: 367 LEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK-TIS 425
+E S LI Q +V+GQD++ GA++VP E A + + +EL+ K +
Sbjct: 520 IEAKLCESPLIDQCMVVGQDKKHLGALVVPSLEGFAAAGIKAETL----TELAGSKEAVR 575
Query: 426 LLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 454
L++ E +++ S K + + ++D+PF V
Sbjct: 576 LIHEEAKRFISFDNGFKKYEHVHSLKLLDKPFEV 609
>gi|449116076|ref|ZP_21752529.1| hypothetical protein HMPREF9726_00514 [Treponema denticola H-22]
gi|448954596|gb|EMB35373.1| hypothetical protein HMPREF9726_00514 [Treponema denticola H-22]
Length = 616
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 151/414 (36%), Positives = 227/414 (54%), Gaps = 23/414 (5%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E + +DD+A+ ++TSGTTGNPKGV +TH+N + Q+ L D + + G K +S+LP WH +
Sbjct: 161 ENVDTDDLASIIFTSGTTGNPKGVTMTHRNFMIQLMELPDRIILKPGQKAISVLPVWHSF 220
Query: 80 ERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
ERAC Y I G + Y+ L D+ + P SVP ++E +Y GI K +
Sbjct: 221 ERACEYVIIISGGTIAYSKPIGSVLLADMVKINPTLFPSVPRIWEAVYDGIFKAMKKRGR 280
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFC--LTRNQKQPSYLVALIDWLWARIICAILWPLH 195
+ I + KR G C R K ++A++ L C + PL+
Sbjct: 281 PLYYLFLFFIEVGIKTMRLKRRVTGQCPHFQRKTKVIYPILAVLPLL-----C--IAPLY 333
Query: 196 LLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
+ + L+Y+ I+ G +AGVSGGG+LP ++D F+ AI + V GYG+TE++PVI+ R
Sbjct: 334 YIGDLLIYRAIRKKFGKCFRAGVSGGGALPPNVDEFFWAIRINVMEGYGITETAPVISVR 393
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
V G++G P+ E KI+D E LP KG++ VRG V +GY+K+P T + +
Sbjct: 394 PMPKPVFGTLGKPLACFESKIIDKNGKE-LPHNRKGLLLVRGDAVTKGYYKDPERTAEVI 452
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
D+DGW +TGD+ + G L+L+GR K+TIVL GEN+EP+ +E S
Sbjct: 453 DKDGWFDTGDLAI----------KTVDGELILKGRKKNTIVLRGGENIEPVPIEVKLQES 502
Query: 375 SLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
LI VV+GQDQR GA+IV KE + A + + +EL + + +Y
Sbjct: 503 PLISIAVVLGQDQRSLGALIVVHKENLQSWAANNGLRNVPVTELIHDSNVQKMY 556
>gi|449109188|ref|ZP_21745826.1| hypothetical protein HMPREF9722_01522 [Treponema denticola ATCC
33520]
gi|449119875|ref|ZP_21756266.1| hypothetical protein HMPREF9725_01731 [Treponema denticola H1-T]
gi|449122271|ref|ZP_21758615.1| hypothetical protein HMPREF9727_01375 [Treponema denticola MYR-T]
gi|448948751|gb|EMB29584.1| hypothetical protein HMPREF9727_01375 [Treponema denticola MYR-T]
gi|448948874|gb|EMB29704.1| hypothetical protein HMPREF9725_01731 [Treponema denticola H1-T]
gi|448959834|gb|EMB40552.1| hypothetical protein HMPREF9722_01522 [Treponema denticola ATCC
33520]
Length = 616
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 151/414 (36%), Positives = 227/414 (54%), Gaps = 23/414 (5%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E + +DD+A+ ++TSGTTGNPKGV +TH+N + Q+ L D + + G K +S+LP WH +
Sbjct: 161 ENVDTDDLASIIFTSGTTGNPKGVTMTHRNFMTQLLELPDRIILKPGQKAISVLPVWHSF 220
Query: 80 ERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
ERAC Y I G + Y+ L D+ + P SVP ++E +Y GI K +
Sbjct: 221 ERACEYVIIISGGTIAYSKPIGSVLLADMVKINPTLFPSVPRIWEAVYDGIFKVMKKRGR 280
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFC--LTRNQKQPSYLVALIDWLWARIICAILWPLH 195
+ I + KR G C R K ++A++ L C + PL+
Sbjct: 281 PLYYLFLFFIEVGIKTMRLKRRVTGQCPHFQRKTKVIYPILAVLPLL-----C--IAPLY 333
Query: 196 LLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
+ + L+Y+ I+ G +AGVSGGG+LP ++D F+ AI + V GYG+TE++PVI+ R
Sbjct: 334 YIGDILIYRAIRKKFGKCFRAGVSGGGALPPNVDEFFWAIRINVMEGYGITETAPVISVR 393
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
V G++G P+ E KI+D E LP KG++ VRG V +GY+K+P T + +
Sbjct: 394 PMPKPVFGTLGKPLACFESKIIDKNGKE-LPHNRKGLLLVRGDAVTKGYYKDPERTAEVI 452
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
D+DGW +TGD+ + G L+L+GR K+TIVL GEN+EP+ +E S
Sbjct: 453 DKDGWFDTGDLAI----------KTVDGELILKGRKKNTIVLRGGENIEPVPIEVKLQES 502
Query: 375 SLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
LI VV+GQDQR GA+IV KE + A + + +EL + + +Y
Sbjct: 503 PLISIAVVLGQDQRSLGALIVVHKENLQSWAANNGLRNVPVTELIHDSNVQKMY 556
>gi|398348984|ref|ZP_10533687.1| long-chain-fatty-acid CoA ligase [Leptospira broomii str. 5399]
Length = 685
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 172/475 (36%), Positives = 249/475 (52%), Gaps = 67/475 (14%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE----NGDKFLSML 73
+ E I DD+ T +YTSGTTG PKGVML H N++HQ+ + ++ + + D LS+L
Sbjct: 171 RIEAIKPDDLFTLIYTSGTTGMPKGVMLMHSNMIHQMEHVVPLILKKSMIKDDDSMLSIL 230
Query: 74 PPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 133
P WH++ER Y S GI YT V +L++DL + +P +M S P V+E++Y+GI +I
Sbjct: 231 PVWHIFERVVEYSAISLGIATFYTKVSDLRNDLAKAKPSFMASAPRVWESIYTGIYNRIN 290
Query: 134 T---SSAARRVVARALIRISFAYTAFKRI-------YEG------FCL-----TRNQKQP 172
+ R+ + S Y A R YEG F L R
Sbjct: 291 DPKQTPPVRKFLFNTAYLFSKNYHAAIRFLSGREVDYEGRNIIQSFILGIRAVIRLVLTG 350
Query: 173 SYLVALI---DWLWAR-------IICAILWPLHLLA--------EKLVYKKIQSAIGISK 214
+ V+LI + + + +I +L + +L + +V KI+ A G
Sbjct: 351 PFTVSLIAGASYFYVKTAHPNLPLIPGLLLTVAILGLIFNYKTLDAIVLSKIRQATGGRL 410
Query: 215 AG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEI 273
G +SGGG+L H+D F+ IG+ V GYG+TE++PVI+ R ++GSVG+ + TE+
Sbjct: 411 RGTLSGGGALQRHVDNFFNDIGLLVLEGYGMTETAPVISVRHYDYPIIGSVGYIVPKTEL 470
Query: 274 KIVD---------AETNEVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
+I D + EVL G KGIV ++G QVM+GY+KNP ATK+ + DGW+NT
Sbjct: 471 QIRDDSGKVLTHINDNKEVLAGRIGLKGIVHIKGPQVMKGYYKNPEATKKTI-SDGWINT 529
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GDIG+I L L GRAKDT+VL GENVEP+ +E S I+Q +V
Sbjct: 530 GDIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPYIKQSMV 579
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL-SKEKTISLLYGELRKWTS 436
GQDQ+ GAIIVPD E + + I D +L K + E+R++ S
Sbjct: 580 FGQDQKVLGAIIVPDFENLKPWLEENGISAHDIKDLIDHPKVLEFYKREVREYNS 634
>gi|268680079|ref|YP_003304510.1| AMP-dependent synthetase and ligase [Sulfurospirillum deleyianum
DSM 6946]
gi|268618110|gb|ACZ12475.1| AMP-dependent synthetase and ligase [Sulfurospirillum deleyianum
DSM 6946]
Length = 629
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 135/382 (35%), Positives = 221/382 (57%), Gaps = 13/382 (3%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E + ++DI T +YTSGTTG PKGV L+H+N+++ +R + ++ E+ D ++S+LP WH++
Sbjct: 173 EALHTEDIVTIIYTSGTTGTPKGVPLSHQNIMYNVREIPPLIALESADVWVSILPSWHIF 232
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ERA Y S G +Y+ ++ DL+ Y+P + +VP ++E++Y+ I + + +
Sbjct: 233 ERAAEYVALSGGCCTVYSTIKTFAADLEHYKPTIVATVPRLWESMYTKINTTLEKTDPKK 292
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + LI IS AY +RI + L QK+ ++L D A + L+P H A+
Sbjct: 293 AKIFKKLIAISVAYKRAERILKD-ELPCFQKRSAFLTCK-DKSIAFVSRFALYPFHAFAQ 350
Query: 200 KLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
K + + G + VSGGG+LP +D + +AIG+++ YG++E +PVIA R CN
Sbjct: 351 KKLSLVQEKFGGRLRLAVSGGGALPDFLDAWIDAIGIRIVNAYGMSECAPVIAGRALQCN 410
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
++G P+ T +KIV E L AG G + V+G QVMQGY+KNP ++ E+G+
Sbjct: 411 TFSTLGLPVQGTMLKIVSKE-GVALEAGEIGEIWVKGEQVMQGYYKNPQENTKSFSEEGF 469
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
TGD+G + G LV+ GR+K+ IVL+ GENV+P +E I+
Sbjct: 470 FKTGDLGKVT----------LNGELVITGRSKEIIVLANGENVDPSRIESTLSMLPFIQD 519
Query: 380 IVVIGQDQRRPGAIIVPDKEEV 401
+++G ++ GA+IVPD E++
Sbjct: 520 AILVGHSKKGLGALIVPDFEKL 541
>gi|183219760|ref|YP_001837756.1| long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189909895|ref|YP_001961450.1| long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167774571|gb|ABZ92872.1| Long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167778182|gb|ABZ96480.1| Long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 682
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 170/488 (34%), Positives = 257/488 (52%), Gaps = 66/488 (13%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY-DIVPAENGDKFLSMLPPWHVYE 80
I DD+ T +YTSGTTG PKGVML H N++HQ+ + + D+ LS+LP WH++E
Sbjct: 176 IKPDDLYTLIYTSGTTGMPKGVMLMHSNMIHQMHYVVPRVAKVTPDDRMLSILPVWHIFE 235
Query: 81 RACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT---SSA 137
R YF G YT V L++D+Q+ +P +M S P V+E++Y+GI +I +
Sbjct: 236 RVVEYFAIINGGSTYYTKVTELRNDIQKARPTFMASAPRVWESIYNGIYTRINDPKQTPP 295
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLT---RNQKQPSYL--VALIDWLWARIICAILW 192
RR + + S Y A R +G+ + RN Q L V+++ L+ +
Sbjct: 296 VRRFLFKVAYFFSKHYHAAIRFLKGWEVDYEGRNILQSLVLSIVSIVKLLFTGPFTLTIL 355
Query: 193 -----------------PLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSL 223
PL++LA +++V KI+ A G +A +SGGG+L
Sbjct: 356 SLVASQFLVPEESPLKTPLYVLAGLGVLFNSFTLDRIVLSKIRQATGGHLRATLSGGGAL 415
Query: 224 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI-------- 275
H+D F+ IG+ V GYG+TE+ PVI+AR ++GSVG + ++++I
Sbjct: 416 QKHVDAFFMDIGITVLEGYGMTETGPVISARTFDRPIMGSVGDIVPLSQVQIRDDAGNVL 475
Query: 276 --VDAETNEVL-PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHH 332
+D + N + G KG+V ++G QVM+GY+KNP TK+ + D W+NTGDIG I
Sbjct: 476 CHIDDKRNIIFGKLGVKGVVHLKGPQVMKGYYKNPETTKKTI-VDNWMNTGDIGMI---- 530
Query: 333 SRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 392
L L GRAKDTIVL GENVEP+ +E S I+Q +V+GQDQ+ G+
Sbjct: 531 ------NFKKTLTLTGRAKDTIVLLGGENVEPVPIENKIDESPYIKQSMVVGQDQKVLGS 584
Query: 393 IIVPDKEEVLMAAKRLSIVHADASEL-SKEKTISLLYGELRKWTS-KCSF----QIGPIH 446
IIVPD + ++ A+ I + +L + K I E+R + S K F Q+ +
Sbjct: 585 IIVPDFDALIPWAEENGITEKNPEKLITHPKVIEFYKKEVRNFNSVKTGFKNFEQVQYVT 644
Query: 447 VVDEPFTV 454
++ +PF V
Sbjct: 645 LITKPFEV 652
>gi|449128811|ref|ZP_21765057.1| hypothetical protein HMPREF9733_02460 [Treponema denticola SP33]
gi|448941219|gb|EMB22123.1| hypothetical protein HMPREF9733_02460 [Treponema denticola SP33]
Length = 641
Score = 250 bits (639), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 148/412 (35%), Positives = 228/412 (55%), Gaps = 19/412 (4%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E + +DD+A+ ++TSGTTGNPKGV ++H+N + Q+ L D + + G K +S+LP WH +
Sbjct: 186 ENVDTDDLASIIFTSGTTGNPKGVTMSHRNFMTQLLELPDRIILKPGQKAISVLPVWHSF 245
Query: 80 ERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
ERAC Y I G + Y+ L D+ + P SVP ++E +Y GI K +
Sbjct: 246 ERACEYVIIISGGTIAYSKPIGSILLADMLKINPTLFPSVPRIWEAVYDGIFKVMKKRGR 305
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
+ + + KR G C Q++ L ++ L ++C + P++ +
Sbjct: 306 PLYYLFLFFVDVGIKTMRLKRRVTGQC-PHFQRRTKVLYPILAVL--PLLC--IAPMYYI 360
Query: 198 AEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 256
+ L+Y+ I+ G KAGVSGGG+LP ++D F+ A+ + V GYG+TE++PVI+ R
Sbjct: 361 GDLLIYRTIRKKFGKCFKAGVSGGGALPPNVDEFFWAVRINVMEGYGITETAPVISVRPM 420
Query: 257 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 316
V G++G P+ E KI+D NE LP KG++ V+G V +GY+K P T + +D+
Sbjct: 421 PRPVFGTLGKPLACFESKIIDKNGNE-LPHNRKGLLLVKGDAVTKGYYKEPERTAEVIDK 479
Query: 317 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 376
DGW +TGD+ + G L+L+GR K+TIVL GEN+EP+ +E S L
Sbjct: 480 DGWFDTGDLAI----------KTIDGELILKGRRKNTIVLRGGENIEPVPIEVKLQESPL 529
Query: 377 IRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
I VV+GQDQR GA+IV KE + A + + SEL + + +Y
Sbjct: 530 ISIAVVLGQDQRSLGALIVVHKENLQAWAANNGLRNVPVSELVHDSNVQKMY 581
>gi|449131475|ref|ZP_21767689.1| hypothetical protein HMPREF9724_02354 [Treponema denticola SP37]
gi|448939175|gb|EMB20093.1| hypothetical protein HMPREF9724_02354 [Treponema denticola SP37]
Length = 616
Score = 250 bits (639), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 149/414 (35%), Positives = 228/414 (55%), Gaps = 23/414 (5%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E + +DD+A+ ++TSGTTGNPKGV +TH+N + Q+ L D + + G K +S+LP WH +
Sbjct: 161 ENVDTDDLASIIFTSGTTGNPKGVTMTHRNFMTQLMELPDRIILKPGQKAISVLPVWHSF 220
Query: 80 ERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
ERAC Y I G + Y+ L D+ + P SVP ++E +Y GI K +
Sbjct: 221 ERACEYVIIISGGTIAYSKPIGSVLLADMVKINPTLFPSVPRIWEAVYDGIFKAMKKRGR 280
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFC--LTRNQKQPSYLVALIDWLWARIICAILWPLH 195
+ I + KR G C R K ++A++ ++C + PL+
Sbjct: 281 PLYYLFLFFIEVGIKTMRLKRRVTGQCPHFQRKTKVIYPILAVLP-----LLC--IAPLY 333
Query: 196 LLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
+ + L+Y+ I+ G +AGVSGGG+LP ++D F+ AI + V GYG+TE++PVI+ R
Sbjct: 334 YIGDILIYRAIRKKFGKCFRAGVSGGGALPPNVDEFFWAIRINVMEGYGITETAPVISVR 393
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
V G++G P+ E KI++ E LP KG++ VRG V +GY+K+P T + +
Sbjct: 394 PMPKPVFGTLGKPLACFESKIINKNGKE-LPHNRKGLLLVRGDAVTKGYYKDPERTAEVI 452
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
D+DGW +TGD+ + G L+L+GR K+TIVL GEN+EP+ +E S
Sbjct: 453 DKDGWFDTGDLAI----------KTVDGELILKGRKKNTIVLRGGENIEPVPIEVKLQES 502
Query: 375 SLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
LI VV+GQDQR GA+IV KE + A + + +EL + + +Y
Sbjct: 503 PLISLAVVLGQDQRSLGALIVVHKENLQSWAANNGLRNVPVTELIHDSNVQKMY 556
>gi|291288156|ref|YP_003504972.1| AMP-dependent synthetase and ligase [Denitrovibrio acetiphilus DSM
12809]
gi|290885316|gb|ADD69016.1| AMP-dependent synthetase and ligase [Denitrovibrio acetiphilus DSM
12809]
Length = 627
Score = 250 bits (639), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 138/385 (35%), Positives = 222/385 (57%), Gaps = 15/385 (3%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
K + G DDI T +YTSGTTG PKGVMLT++N++H + + D++ ++ D +LS+LP WH
Sbjct: 171 KADVGGIDDIFTIIYTSGTTGYPKGVMLTNRNIMHNLDIIPDLIALKDDDIWLSILPAWH 230
Query: 78 VYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
++E + G L+Y+ V+ DL+ Y+P + +VP V+E LYS + +
Sbjct: 231 IFEHTVELVAMANGCRLVYSGVKTFSADLEHYKPTIVATVPRVWEALYSKVIATLDKQGG 290
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
+ + L R S +Y R +G L +KQ + + I A + A L PL ++
Sbjct: 291 RKLSLFLMLCRASASYNRQLRRLKGH-LPEFRKQ-NIFIKFIKNTGAALKLAALTPLKII 348
Query: 198 AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 256
A K +K +Q G + VSGGGSLP +++ + +AIG+++ YG+TE +P IA R
Sbjct: 349 AMK-KFKAVQDKFGGRLRLAVSGGGSLPAYLESWLDAIGLRIVNAYGMTECAPAIAGRAL 407
Query: 257 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 316
C+V G++G + TEI+IV+ E ++LPAG +G ++++G QV GY++ P + A +
Sbjct: 408 NCDVFGTLGPAVPGTEIRIVN-EDGDILPAGEEGEIQIQGPQVFPGYYELPEENEHAFTD 466
Query: 317 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 376
DG+ TGD+G + G L + GR KD IVL+ GEN++P +E A
Sbjct: 467 DGFFRTGDLGMLT----------LTGELKITGRMKDIIVLANGENIDPTRIESAITMLPF 516
Query: 377 IRQIVVIGQDQRRPGAIIVPDKEEV 401
++ V++GQDQ+ A+I+PD E++
Sbjct: 517 VKDAVLVGQDQKSLAALIIPDFEKM 541
>gi|386859826|ref|YP_006272532.1| Long-chain-fatty-acid CoA ligase [Borrelia crocidurae str. Achema]
gi|384934707|gb|AFI31380.1| Long-chain-fatty-acid CoA ligase [Borrelia crocidurae str. Achema]
Length = 643
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 150/430 (34%), Positives = 235/430 (54%), Gaps = 31/430 (7%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHV 78
E + D+AT +YTSGTTG PKGV+L H++ + Q+ + D +P+ E G +S+LP WH
Sbjct: 178 EKVSGKDVATIIYTSGTTGFPKGVVLRHESFIFQLDRINDYLPSLEPGQIMISILPLWHS 237
Query: 79 YERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
+ER C Y + G+ + Y+ L D PH +ISVP ++E + +GI K++ + S
Sbjct: 238 FERTCEYIVALNGLSIAYSKPVGPILLKDFAALNPHAIISVPRIWEGIRAGIIKKV-SES 296
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
++++ +++ Y + G L ++ ++L++ + I +++P
Sbjct: 297 FLKKILFNFFLKVGIFYVKLMEKFLG--LVPLYRKSNFLISFFVKIIYLIGLILVFPFKF 354
Query: 197 LAEKLVYKKIQSAIGISKA-GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
L LV+KKI+ A+G G+SGGG+L ++D F++A+G+ V GYGLTE+ PV++ RR
Sbjct: 355 LGHILVFKKIKKALGKRFIFGISGGGALVDYVDYFFKAVGIVVLEGYGLTETGPVLSVRR 414
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
V +VG E K+VD N VLP G KG + V+ QVM GYFK+ + T++ L
Sbjct: 415 LKSPVANTVGPLFPDIEYKVVDHNGN-VLPPGEKGELWVKSPQVMSGYFKDETMTREVLT 473
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGV---LVLEGRAKDTIVLSTGENVEPLELEEAAL 372
DGW TGD+ C + + + GR+KDTIVL GEN+EP +E A
Sbjct: 474 RDGWFKTGDL-------------VCATINDEISIVGRSKDTIVLRGGENIEPEPIERALS 520
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELR 432
+S I +VV+GQDQ+ GAIIVP+ E + A I + +L + ++
Sbjct: 521 KSVFIENVVVVGQDQKFLGAIIVPNFEVLEKWAISSGIAFSSHDDLLSNELVN------- 573
Query: 433 KWTSKCSFQI 442
K+ SKC I
Sbjct: 574 KFYSKCILDI 583
>gi|359688978|ref|ZP_09258979.1| long-chain-fatty-acid CoA ligase [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418756346|ref|ZP_13312534.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|384116017|gb|EIE02274.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
Length = 685
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 174/498 (34%), Positives = 254/498 (51%), Gaps = 72/498 (14%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE----NGDKFLSML 73
+ E I DD+ T +YTSGTTG PKGVML H N++HQ+ + ++ + + D LS+L
Sbjct: 171 RIEGIKPDDLFTLIYTSGTTGMPKGVMLMHSNMVHQMEYVVPLILKKSLLRDDDSMLSIL 230
Query: 74 PPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 133
P WH++ER Y S GI YT V +L++DL + +P +M S P V+E++Y+GI +I
Sbjct: 231 PVWHIFERVVEYSAISLGISTFYTKVADLRNDLAKARPSFMASAPRVWESIYTGIYNKIN 290
Query: 134 T---SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ------------------P 172
+ R+ + S Y A R G + +
Sbjct: 291 DPKQTPPVRKFLFNTAYLFSKNYNAGIRFLTGKEVDYENRSIFKSLALGIKAIGQVVLFG 350
Query: 173 SYLVALIDWLWARII------CAILWPLHLLA------------EKLVYKKIQSAIGISK 214
+ V+LI + I A L P+ L + +V KI+ A G
Sbjct: 351 PFTVSLISAVGYSYIKMYKPELAFLAPVLLTIAILGLIFNFKTLDTIVLSKIRQATGGRL 410
Query: 215 AG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEI 273
G +SGGG+L H+D F+ IG+ V GYG+TES+PVI+ R ++GSVG+ + TE+
Sbjct: 411 RGTLSGGGALQRHVDNFFNDIGLLVLEGYGMTESAPVISVRHYDHPIIGSVGYIVPKTEL 470
Query: 274 KIVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
++ D N ++L G KGIV ++G QVM+GY+KNP TK+ + DGWLNT
Sbjct: 471 QLRDDHGNVLTHINDQRQLLAGKLGVKGIVHIKGPQVMKGYYKNPEVTKKTI-VDGWLNT 529
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GDIG+I H+ L L GRAK+T+VL GENVEP+ +E S I+Q +V
Sbjct: 530 GDIGFINFKHT----------LTLTGRAKETVVLLGGENVEPVPIENRMDESPYIKQSMV 579
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL-SKEKTISLLYGELRKWTS-KCSF 440
GQDQ+ GAIIVPD E + + I D +L K I E+R++ S K F
Sbjct: 580 FGQDQKVLGAIIVPDLEVLQPWLAQNGIQAKDIKDLIDNPKVIEFFKKEIREYNSTKHGF 639
Query: 441 Q----IGPIHVVDEPFTV 454
+ I + + +PF +
Sbjct: 640 KSFELIQHVVIAQKPFEI 657
>gi|418748591|ref|ZP_13304883.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
gi|404275660|gb|EJZ42974.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
Length = 678
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 174/498 (34%), Positives = 254/498 (51%), Gaps = 72/498 (14%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE----NGDKFLSML 73
+ E I DD+ T +YTSGTTG PKGVML H N++HQ+ + ++ + + D LS+L
Sbjct: 164 RIEGIKPDDLFTLIYTSGTTGMPKGVMLMHSNMVHQMEYVVPLILKKSLLRDDDSMLSIL 223
Query: 74 PPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 133
P WH++ER Y S GI YT V +L++DL + +P +M S P V+E++Y+GI +I
Sbjct: 224 PVWHIFERVVEYSAISLGISTFYTKVADLRNDLAKARPSFMASAPRVWESIYTGIYNKIN 283
Query: 134 T---SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ------------------P 172
+ R+ + S Y A R G + +
Sbjct: 284 DPKQTPPVRKFLFNTAYLFSKNYNAGIRFLTGKEVDYENRSIFKSLALGIKAIGQVVLFG 343
Query: 173 SYLVALIDWLWARII------CAILWPLHLLA------------EKLVYKKIQSAIGISK 214
+ V+LI + I A L P+ L + +V KI+ A G
Sbjct: 344 PFTVSLISAVGYSYIKMYKPELAFLAPVLLTIAILGLIFNFKTLDTIVLSKIRQATGGRL 403
Query: 215 AG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEI 273
G +SGGG+L H+D F+ IG+ V GYG+TES+PVI+ R ++GSVG+ + TE+
Sbjct: 404 RGTLSGGGALQRHVDNFFNDIGLLVLEGYGMTESAPVISVRHYDHPIIGSVGYIVPKTEL 463
Query: 274 KIVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
++ D N ++L G KGIV ++G QVM+GY+KNP TK+ + DGWLNT
Sbjct: 464 QLRDDHGNVLTHINDQRQLLAGKLGVKGIVHIKGPQVMKGYYKNPEVTKKTI-VDGWLNT 522
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GDIG+I H+ L L GRAK+T+VL GENVEP+ +E S I+Q +V
Sbjct: 523 GDIGFINFKHT----------LTLTGRAKETVVLLGGENVEPVPIENRMDESPYIKQSMV 572
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL-SKEKTISLLYGELRKWTS-KCSF 440
GQDQ+ GAIIVPD E + + I D +L K I E+R++ S K F
Sbjct: 573 FGQDQKVLGAIIVPDLEVLQPWLAQNGIQAKDIKDLIDNPKVIEFFKKEIREYNSTKHGF 632
Query: 441 Q----IGPIHVVDEPFTV 454
+ I + + +PF +
Sbjct: 633 KSFELIQHVVIAQKPFEI 650
>gi|187918454|ref|YP_001884017.1| long-chain-fatty-acid--CoA ligase [Borrelia hermsii DAH]
gi|119861302|gb|AAX17097.1| long-chain-fatty-acid--CoA ligase [Borrelia hermsii DAH]
Length = 643
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 150/426 (35%), Positives = 237/426 (55%), Gaps = 31/426 (7%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHV 78
E + DIAT +YTSGTTG PKGV+L H++ + Q+ + + +P E G +S+LP WH
Sbjct: 178 EKVSGKDIATIIYTSGTTGLPKGVVLRHESFIFQLDRISNYLPTLEPGKIMISILPLWHS 237
Query: 79 YERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
+ER+C Y + GI + Y+ L D PH +ISVP ++E + GI K++ + S
Sbjct: 238 FERSCEYIVTLNGIAVAYSKPIGPILLKDFATLNPHAIISVPRIWEGIRIGIIKRV-SES 296
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
+R++ +++ Y K + GF K+ +++V+ + ++ P
Sbjct: 297 FLKRILFNVFLKVGIIYVKLKEKFLGFVPV--YKKSNFVVSFFMKVIYLAGLILILPFKF 354
Query: 197 LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR- 254
L LV++KI+ A+G + G+SGGG+L ++D F++A+G+ V GYGLTE+ PV++ R
Sbjct: 355 LGYVLVFRKIKKALGKRFEFGISGGGALVDYVDYFFKAVGIVVLEGYGLTETGPVLSVRC 414
Query: 255 --RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
RP N +VG + E ++VD++ N LP G KG + VR QVM GYFK+ + T++
Sbjct: 415 LRRPVAN---TVGPLLPDVEYRVVDSDGN-ALPPGEKGELWVRSPQVMSGYFKDEATTRE 470
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
L DGW TGD+ ++ + + GR KDTIVL GEN+EP +E A
Sbjct: 471 VLTRDGWFKTGDLVCATMNNE----------ISIVGRTKDTIVLRGGENIEPEPIERALS 520
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELR 432
+S I +VV+GQDQ+ GAIIVP+ E + A ++ + +L ++++ LY
Sbjct: 521 KSVFIESVVVVGQDQKFLGAIIVPNFEVLEKWAGSNGVLFSSRDDLLSNESVNKLY---- 576
Query: 433 KWTSKC 438
SKC
Sbjct: 577 ---SKC 579
>gi|203288031|ref|YP_002223046.1| long-chain-fatty-acid CoA ligase [Borrelia recurrentis A1]
gi|201085251|gb|ACH94825.1| long-chain-fatty-acid CoA ligase [Borrelia recurrentis A1]
Length = 643
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 151/430 (35%), Positives = 235/430 (54%), Gaps = 31/430 (7%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHV 78
E + D+AT +YTSGTTG PKGV+L H++ + Q+ + D +P+ E G +S+LP WH
Sbjct: 178 EKVSGKDVATIIYTSGTTGFPKGVVLRHESFIFQLDRINDYLPSLEPGQIMISILPLWHS 237
Query: 79 YERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
+ER C Y + G+ + Y+ L D PH +ISVP ++E + +GI K++ + S
Sbjct: 238 FERTCEYIVALNGLSIAYSKPVGPILLKDFAALNPHAIISVPRIWEGIRAGIIKKV-SES 296
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
++++ + + Y F + G L ++ ++L++ + I +++P
Sbjct: 297 FLKKILFNFFLNVGIFYVKFMEKFLG--LVPIYRKSNFLISFFMKIIYLIGLILIFPFKF 354
Query: 197 LAEKLVYKKIQSAIGISKA-GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
L LV+KKI+ A+G G+SGGG+L ++D F++A+G+ V GYGLTE+ PV++ RR
Sbjct: 355 LGHILVFKKIKKALGKRFIFGISGGGALVDYVDYFFKAVGIVVLEGYGLTETGPVLSVRR 414
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
V +VG E K+VD N VLP G KG + V+ QVM GYFK+ + T++ L
Sbjct: 415 LKSPVANTVGPLFPDIEYKVVDHNGN-VLPPGEKGELWVKSPQVMSGYFKDETMTREVLT 473
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGV---LVLEGRAKDTIVLSTGENVEPLELEEAAL 372
DGW TGD+ C + + + GR+KDTIVL GEN+EP +E A
Sbjct: 474 RDGWFKTGDL-------------VCATINDEISIVGRSKDTIVLRGGENIEPEPIERALS 520
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELR 432
+S I +VV+GQDQ+ GAIIVP+ E + A I + +L + ++
Sbjct: 521 KSVFIENVVVVGQDQKFLGAIIVPNFEVLEKWAISSGIAFSSHDDLLSNELVN------- 573
Query: 433 KWTSKCSFQI 442
K+ SKC I
Sbjct: 574 KFYSKCILDI 583
>gi|381180251|ref|ZP_09889093.1| AMP-dependent synthetase and ligase [Treponema saccharophilum DSM
2985]
gi|380767812|gb|EIC01809.1| AMP-dependent synthetase and ligase [Treponema saccharophilum DSM
2985]
Length = 636
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 140/385 (36%), Positives = 221/385 (57%), Gaps = 28/385 (7%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+AT ++TSGTTG PKGVML+H N + Q+ + + + GD+ + +LP WH ++RA
Sbjct: 185 DDLATIIFTSGTTGKPKGVMLSHGNFITQLDEVCERIYLYPGDRGMMVLPVWHAFQRAVE 244
Query: 85 YFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA---- 138
Y + ++ + Y+ L DL+ P + +VP V+E +Y GI + + +
Sbjct: 245 YVVLNQSATICYSKPVGPVLLADLKALNPQVLPAVPRVFEAVYDGIYRNMRKTGGIVLRL 304
Query: 139 -RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
VA AL F R R + P+++ I WL +C +P+ LL
Sbjct: 305 FNFFVAIALFHSKLDRVLFDRTTRYGMDKRWLQWPAFV---IPWL----VC---YPIKLL 354
Query: 198 AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 256
++++KI+ +G + ++GV+GGG+LP +D F+ AIG+K+ GYGLTE++P+I+ R
Sbjct: 355 GGAMIFRKIRKMLGTNFRSGVAGGGALPPAVDKFFWAIGIKLVEGYGLTETAPIISVRPI 414
Query: 257 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 316
VLG+VG + ++VD T + L G KG+++V+G VM+GY+K P T +A+DE
Sbjct: 415 DRPVLGNVGSAVRGISARVVDPLTRKPLKRGKKGVLEVKGGTVMKGYYKQPELTAKAIDE 474
Query: 317 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 376
+GW +TGD+ + ++ +VL GR KDTIV + GENVEPL +E S
Sbjct: 475 NGWFDTGDLARLTANNE----------IVLCGRVKDTIVQTGGENVEPLPIEMKMQESRF 524
Query: 377 IRQIVVIGQDQRRPGAIIVPDKEEV 401
I+ VV+GQDQR A++VP++ EV
Sbjct: 525 IKTAVVLGQDQRYLAALVVPEQSEV 549
>gi|408792933|ref|ZP_11204543.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408464343|gb|EKJ88068.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 632
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 150/390 (38%), Positives = 224/390 (57%), Gaps = 32/390 (8%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 80
TI D+ T +YTSGTTG PKGVMLT N+L Q+++L + + GD+ LS+LP WH++E
Sbjct: 178 TIKESDLFTMIYTSGTTGTPKGVMLTQGNILFQLQNL--PIRLQKGDRTLSILPIWHIFE 235
Query: 81 RACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
R F G Y++VR LK+DL+ +PH+M S P ++E++YSGI + SS ++
Sbjct: 236 RIFEIFSLYYGACTYYSSVRTLKEDLRFVKPHFMASAPRLWESIYSGILGTLAKSSPVKQ 295
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQ----KQPSYLVALIDWLWARIICAILWPLHL 196
+ + + + + +++ G L + KQ + + L+ + +I P HL
Sbjct: 296 KMFQLAMFFAKRFFISRQVITGNVLDIHPVVFWKQS---IRFVYHLYRFFLVSI--P-HL 349
Query: 197 LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
+ + LV KI+ A G + SGGG+LP H+D F+ IG+ V GYG+TE++PV+A R
Sbjct: 350 VFDFLVLSKIRKATGGELRGSCSGGGALPYHVDEFFNTIGIPVLEGYGMTETAPVLAMRT 409
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEV--------LPAGSKGIVKVRGSQVMQGYFKNP 307
+ GSVG T++++VD T EV G KG + V+G QVM GY+KNP
Sbjct: 410 FEEIIPGSVGKIFPKTKLRLVDLHTGEVFLDTEVGKFVFGRKGEIHVKGKQVMAGYYKNP 469
Query: 308 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 367
AT + L DGWLNTGD+G +H+ L + GR+K+TIVL GENVEP+ +
Sbjct: 470 DATNRVL-VDGWLNTGDLGIFTANHN----------LRIVGRSKETIVLLGGENVEPVPI 518
Query: 368 EEAALRSSLIRQIVVIGQDQRRPGAIIVPD 397
E L S I Q +V+GQDQ+ ++ P+
Sbjct: 519 ESKILESEWIDQCMVVGQDQKYLSVLVYPN 548
>gi|328949040|ref|YP_004366377.1| long-chain-fatty-acid--CoA ligase., o-succinylbenzoate--CoA ligase
[Treponema succinifaciens DSM 2489]
gi|328449364|gb|AEB15080.1| Long-chain-fatty-acid--CoA ligase., o-succinylbenzoate--CoA ligase
[Treponema succinifaciens DSM 2489]
Length = 645
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 156/448 (34%), Positives = 247/448 (55%), Gaps = 38/448 (8%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+AT ++TSGTTG PKGVML+H N+L Q+ + + + G++ L +LP WH ++RA
Sbjct: 189 DDLATIIFTSGTTGTPKGVMLSHGNILCQLDEVTERIFLNPGERALLVLPVWHAFQRAVE 248
Query: 85 YFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y I ++G L Y+ L DLQ+ P+ + +VP V+ +Y GI +++ + +
Sbjct: 249 YVIIAQGGTLCYSKPIGSVLLQDLQKLDPYLLPAVPRVWSAVYEGIWRKMRKTGG----I 304
Query: 143 ARALIRISFAYT-AFKRIYEGFCLTRNQKQPSYL---VALIDWLWARIICAILWPLHLLA 198
A AL R A + +I + P YL ++ W W +L+P+ LL
Sbjct: 305 AFALFRFFVAEALLWSKIDRKLRRKNTRFSPDYLGFWWPVLVWPW-----LLLYPIKLLG 359
Query: 199 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
LV++KI++ +G + ++G++GGG+ P ++D F+ AIGV +Q GYGLTE+SP+I+ R
Sbjct: 360 NLLVFRKIRAMVGKNFRSGIAGGGAFPKNVDEFFWAIGVNIQEGYGLTETSPIISVRPIA 419
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
+ G+VG P+ E+++VD + +L KG ++++G VMQGY+K P T + + D
Sbjct: 420 DPIFGNVGTPLRGMEVRVVD-DDGIILGRCKKGTLQIKGDCVMQGYYKRPDLTDKVMTVD 478
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GW +TGDI ++ ++ + L GR KDTIVL GEN+EPL +E S I
Sbjct: 479 GWFDTGDIAILSVNNE----------IQLRGRKKDTIVLQGGENIEPLPIEAKINESRFI 528
Query: 378 RQIVVIGQ-----DQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS-LLYGE- 430
VV G DQ+ A+I+PD++ + A I EL++ + I LL GE
Sbjct: 529 STSVVFGTNEKGIDQKYLVALILPDQDAIETYATENGINFNSYDELAETEAIQKLLEGEV 588
Query: 431 LRKWTSKCSFQ----IGPIHVVDEPFTV 454
++K F+ I I V+ +PF V
Sbjct: 589 FESISAKNGFKSFERINKIAVITKPFEV 616
>gi|119952940|ref|YP_945149.1| long-chain-fatty-acid--CoA ligase [Borrelia turicatae 91E135]
gi|119861711|gb|AAX17479.1| long-chain-fatty-acid--CoA ligase [Borrelia turicatae 91E135]
Length = 630
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 222/384 (57%), Gaps = 18/384 (4%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 80
I DD+AT +YTSGTTGNPKGVML+H N L+Q+ S ++ G F+ +LP WH ++
Sbjct: 172 NINPDDMATIIYTSGTTGNPKGVMLSHANFLYQVSSFSRMINTSEGQIFMCILPIWHSFQ 231
Query: 81 RACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
R+ Y IF +G+ +++++ RN+ DD++ PHY+ +VP L+ I++ IF A
Sbjct: 232 RSFSYNIFLKGMTCLFSSIVPRNMLDDMKNVNPHYIAAVP----RLWIAIKQNIFKEVAK 287
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
+ ++ L +I I L L+ + L + +PL +L
Sbjct: 288 KPFFSKLLFKIFVKSACLNDICYRIILGLYPDNGFDLLFPMKKLLGILGLIFFFPLRVLG 347
Query: 199 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+ +V+KKI+ +G + G++GGGS+ + + F+ +IG+++ YGLTE+SP +A+
Sbjct: 348 DLIVFKKIKKVLGNNFVVGITGGGSMSLSVVRFFNSIGIELANAYGLTEASPGVASNEHE 407
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
++G+ G + T +I D N++ G KGI+ ++G QVM GY+++ AT+Q + D
Sbjct: 408 KIMIGTCGRILPETVAEIRDENGNKLKTPG-KGILFIKGPQVMIGYYQDEDATRQVIGSD 466
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
G+LNTGDI ++ + V+ + GR KDTIVL+ GEN+EP +E S LI
Sbjct: 467 GFLNTGDIVKLSKDN----------VVQIIGREKDTIVLNNGENIEPAPIEIKLEESLLI 516
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEV 401
+ VV+GQDQ+ GA+I+P+ EE+
Sbjct: 517 EKAVVVGQDQKFLGALILPNFEEI 540
>gi|203284497|ref|YP_002222237.1| long-chain-fatty-acid CoA ligase [Borrelia duttonii Ly]
gi|201083940|gb|ACH93531.1| long-chain-fatty-acid CoA ligase [Borrelia duttonii Ly]
Length = 643
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 150/430 (34%), Positives = 235/430 (54%), Gaps = 31/430 (7%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHV 78
E + D+AT +YTSGTTG PKGV+L H++ + Q+ + D +P+ E G +S+LP WH
Sbjct: 178 EKVSGKDVATIIYTSGTTGFPKGVVLRHESFIFQLDRINDYLPSLEPGQIMISILPLWHS 237
Query: 79 YERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
+ER C Y + G+ + Y+ L D PH +ISVP ++E + +GI K++ + S
Sbjct: 238 FERTCEYIVALNGLSIAYSKPVGPILLKDFAALNPHAIISVPRIWEGIRAGIIKKV-SES 296
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
++++ +++ Y + G L ++ ++L++ + I +++P
Sbjct: 297 FLKKILFNFFLKVGIFYVKLMEKFLG--LVPIYRKSNFLISFFVKIIYLIGLILIFPFKF 354
Query: 197 LAEKLVYKKIQSAIGISKA-GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
L LV+KKI+ A+G G+SGGG+L ++D F++A+G+ V GYGLTE+ PV++ RR
Sbjct: 355 LGHILVFKKIKKALGKRFIFGISGGGALVDYVDYFFKAVGIVVLEGYGLTETGPVLSVRR 414
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
V +VG E K+VD N VLP G KG + V+ QVM GYFK+ + T++ L
Sbjct: 415 LKSPVANTVGPLFPDIEYKVVDHNGN-VLPPGEKGELWVKSPQVMSGYFKDETMTREVLT 473
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGV---LVLEGRAKDTIVLSTGENVEPLELEEAAL 372
DGW TGD+ C + + + GR+KDTIVL GEN+EP +E A
Sbjct: 474 RDGWFKTGDL-------------VCATINDEISIVGRSKDTIVLRGGENIEPEPIERALS 520
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELR 432
+S I +VV+GQDQ+ GAIIVP+ E + A I + +L + ++
Sbjct: 521 KSVFIENVVVVGQDQKFLGAIIVPNFEVLEKWAISSGIAFSSHDDLLSNELVN------- 573
Query: 433 KWTSKCSFQI 442
K+ SKC I
Sbjct: 574 KFYSKCILDI 583
>gi|398342591|ref|ZP_10527294.1| long-chain-fatty-acid CoA ligase [Leptospira inadai serovar Lyme
str. 10]
Length = 545
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 166/493 (33%), Positives = 250/493 (50%), Gaps = 72/493 (14%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 80
++ S+D+ T +YTSGTTG PKGV LTH N++ Q+ S+ I+ D+ +S+LP WH++E
Sbjct: 25 SLKSEDLFTIIYTSGTTGQPKGVQLTHSNMIFQVSSVSPILEITENDRAISILPIWHIFE 84
Query: 81 RACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
R Y G Y+ + +LK +L ++P + + P V+E + +GI ++ R
Sbjct: 85 RFMEYCFLHVGGTTYYSNIPDLKQNLTDFKPTFFGAAPRVWEMICNGILTRMTDPDRTSR 144
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTR--NQKQPSYLVALIDWLWA-------------- 184
+ R L ++++ Y+ K + F L + K S+ ++ +
Sbjct: 145 L-GRILFKLAYTYSEKKNEAKAFFLGNELDLKGRSFFGTILKGIRMTFEYSFFGPFTLSS 203
Query: 185 -RIICAILWPLHLLAEK----------------------LVYKKIQSAI--GISKAGVSG 219
+CA L P A++ LV KI+ I G K VSG
Sbjct: 204 ISFLCATLIPFEYAAKEIKILLYTIGVIGLLFNSFTLDLLVLSKIRRDIVGGFLKTSVSG 263
Query: 220 GGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAE 279
GG+LP +D +G+++ GYG+TE+SPVI+ RR V+GSVGH + T ++I E
Sbjct: 264 GGALPNRVDRTLNHLGIRLLEGYGMTETSPVISLRRMDKFVIGSVGHILPKTRLQI-RTE 322
Query: 280 TNEVLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGW 327
NEVL G KGIV G +M+GY+KNP T AL+ GW+NTGDIG
Sbjct: 323 KNEVLSEIDENGRFTKGKPGQKGIVFASGPHIMKGYYKNPDITADALNA-GWMNTGDIGI 381
Query: 328 IAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQ 387
++ + + L L GRAK+TIVL GENVEP+ +E S I Q +VIGQDQ
Sbjct: 382 VSYNRT----------LTLAGRAKETIVLRGGENVEPVPIEARLQVSKYISQCMVIGQDQ 431
Query: 388 RRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGELRKWTS-----KCSFQ 441
+ GAIIVPD E ++ AK I V ++ L +++ I L E++ + K Q
Sbjct: 432 KNLGAIIVPDFESLIAWAKENYIPVDSEQELLRRKQVIDLYRSEIKALNNARSGFKSFEQ 491
Query: 442 IGPIHVVDEPFTV 454
+ P + +PF V
Sbjct: 492 VTPFLFIVKPFEV 504
>gi|51598401|ref|YP_072589.1| long-chain-fatty-acid CoA ligase [Borrelia garinii PBi]
gi|51572972|gb|AAU06997.1| long-chain-fatty-acid CoA ligase [Borrelia garinii PBi]
Length = 630
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 150/451 (33%), Positives = 250/451 (55%), Gaps = 39/451 (8%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+ S+D+AT +YTSGTTGNPKGVML+H NLL+Q+ S +V + G F+ +LP WH ++R
Sbjct: 173 VDSNDMATIIYTSGTTGNPKGVMLSHANLLYQVSSFSLMVDTQVGQIFMCILPIWHSFQR 232
Query: 82 ACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
+ Y IF +G+ +++ + R + DD++ PHY+ +VP ++ + I K++
Sbjct: 233 SFSYNIFLKGMVCLFSTIVPRAMLDDIKNINPHYIAAVPRLWIAIRQNINKEVSKKPFIS 292
Query: 140 RVVARALIRISFAYTAFKRIY------EGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
R++ I+++F RI GF L K+ + LI L+P
Sbjct: 293 RIIFHFFIKLAFLSDICYRIVMGLYPDNGFNLFFPIKKILGIFGLIS----------LFP 342
Query: 194 LHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
L L++ KI +G + G++GGGS+P+ + F+ +IG+++ YGLTE+SP +A
Sbjct: 343 FKALGNILIFNKINKILGNNFVVGITGGGSMPLSVSRFFNSIGIELANAYGLTETSPGVA 402
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
+ + ++G+ G + T +I DA+ N++ G KGI+ V+G QVM GY+K+ AT +
Sbjct: 403 SNKHKKVIIGTCGKILPGTVAEIRDADGNKLKKPG-KGILFVKGPQVMLGYYKDREATCR 461
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
+ D +LNTGDI ++ + V+ + GR KDTIVL+ GENVEP +E
Sbjct: 462 IIGPDSFLNTGDIAKLSKDN----------VVQIIGREKDTIVLNNGENVEPAPIEIKLE 511
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE----LSKEKTISLLY 428
S LI + VV+GQDQ+ GA+I+P+ EE+ + + DA+ +S + +
Sbjct: 512 ESILIEKAVVVGQDQKFLGALILPNFEEINKYLESVGQKIFDANNRRQVISNNIVLKAIN 571
Query: 429 GELRKWTSKCS-----FQIGPIHVVDEPFTV 454
E++K ++ + QI ++++PF V
Sbjct: 572 DEIKKLINRTNGFKPFEQILKFTLLEKPFEV 602
>gi|392405230|ref|YP_006441842.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
gi|390613184|gb|AFM14336.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
Length = 634
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 143/395 (36%), Positives = 226/395 (57%), Gaps = 23/395 (5%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
+ I D+ T +YTSGTTG PKGVML+H N+L+Q+ I+ D+ LS+LP WH+Y
Sbjct: 179 QKILQGDLFTIIYTSGTTGEPKGVMLSHANMLYQLEIAPKILQMSPRDRILSILPVWHIY 238
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ER Y + G Y+ ++L +D R +P M S P ++E +Y ++++I + A
Sbjct: 239 ERFMLYSVIFSGAHYYYSNKKDLMEDFIRAKPTIMASAPRLWEQIYQKLRERIDKTEAFN 298
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQK----QPSYLVALIDWLWARIICAILWPLH 195
R + +Y +R++ + Q + ++L L + + A L
Sbjct: 299 REL------FDLSYGIKQRLHRAQNVVAGQSAETGEKNFLSNLFEKAVSVFSLAGLKGPD 352
Query: 196 LLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
+ + + ++++ +G G +SGGG+LP+HID F+ AIG+ V GYG+TE+SP+I+ R
Sbjct: 353 VYMDSIFLVRVRAMLGGELRGTISGGGALPLHIDEFFNAIGIPVYEGYGMTETSPLISMR 412
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
+P ++G+VG + T ++I E ++P G G++ V+G VMQGY+KN AT + L
Sbjct: 413 QPGKVIMGTVGFVPDRTTVEI-RGEDGRIMPPGEPGVIFVKGPGVMQGYYKNGDATLKVL 471
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
++GW+NTGDIG RS G L + GRAKDTIVL +GEN+EP+ +E +
Sbjct: 472 -QNGWMNTGDIGVFT------RS----GALSIRGRAKDTIVLRSGENLEPVPMETLLAQH 520
Query: 375 SLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 409
LI Q VV+GQDQ+ G +I PD + +L A ++S
Sbjct: 521 PLIEQAVVVGQDQKNLGVLIWPDYDRLLDAGYQVS 555
>gi|418733739|ref|ZP_13290850.1| AMP-binding enzyme [Leptospira interrogans str. UI 12758]
gi|410772920|gb|EKR52952.1| AMP-binding enzyme [Leptospira interrogans str. UI 12758]
Length = 645
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 147/391 (37%), Positives = 219/391 (56%), Gaps = 24/391 (6%)
Query: 16 HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFL 70
H + I +D+AT VYTSGTTG PKGVMLTHKN++ + S ++ P D+ +
Sbjct: 182 HKRGSAIREEDLATIVYTSGTTGKPKGVMLTHKNIVFNVDSALQGEDLNVYPT---DRSM 238
Query: 71 SMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQK 130
+ LPPWH+ ER G +T++ +L DL +P ++SVP V+E+LY+ I
Sbjct: 239 AYLPPWHIAERLVETVCIRAGGAEAFTSISSLSQDLADIKPTLLLSVPRVWESLYNKIHD 298
Query: 131 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 190
++ SS ++ + A I+ Y +K + L + + S +L L + I +
Sbjct: 299 KVRNSSPVQQALFGAFKEIAITY--YKHLSRLQNLEYSLTEQSTFASLWQKLISFWIVIL 356
Query: 191 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
LW + +++ L + KI+ +G K +SG G+LP +ID F+ AIG+ + GYG+TE S
Sbjct: 357 LWIPNQISQ-LAFNKIKQGLGGELKFALSGAGALPQYIDTFFNAIGIPILEGYGMTELSG 415
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
+ R +G++G I +IK++D + NE+ G KGI +G VM+GY+K P
Sbjct: 416 ISTRRILGEITVGTLGRCIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYKEPEK 475
Query: 310 TKQALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 368
TK+ L DGWLN+GD + W G L GRAKDTIVL GEN+EP +E
Sbjct: 476 TKEILSSDGWLNSGDLLTWT-----------TSGELKYSGRAKDTIVLLGGENLEPEPIE 524
Query: 369 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
A +RS I+Q +VIG DQ+ GA+IVPD+E
Sbjct: 525 FALVRSRFIQQAMVIGHDQKTLGALIVPDRE 555
>gi|219684804|ref|ZP_03539746.1| long-chain-fatty-acid CoA ligase [Borrelia garinii PBr]
gi|219671749|gb|EED28804.1| long-chain-fatty-acid CoA ligase [Borrelia garinii PBr]
Length = 630
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 141/389 (36%), Positives = 229/389 (58%), Gaps = 30/389 (7%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+ S+D+AT +YTSGTTGNPKGVML+H NLL+Q+ S +V + G F+ +LP WH ++R
Sbjct: 173 VDSNDMATIIYTSGTTGNPKGVMLSHANLLYQVSSFGLMVDTQVGQIFMCILPIWHSFQR 232
Query: 82 ACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
+ Y IF +G+ +++ + R + DD++ PHY+ +VP ++ + I K++
Sbjct: 233 SFSYNIFLKGMVCLFSTIVPRAMLDDIKNINPHYIAAVPRLWIAIRQNIYKEVSKKPFIS 292
Query: 140 RVVARALIRISF----AYTAFKRIY--EGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
R++ I+++F Y +Y GF L K+ + L IC L+P
Sbjct: 293 RIIFHFFIKLAFLNDICYRTVMGLYPDNGFNLFCPIKKILGIFGL--------IC--LFP 342
Query: 194 LHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
L L++ K+ +G + G++GGGS+P+ + F+ +IG+++ YGLTE+SP +A
Sbjct: 343 FKALGNILIFNKLNKILGNNFVVGITGGGSMPLSVARFFNSIGIELANAYGLTETSPGVA 402
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
+ + ++G+ G + T +I DA+ N++ G KGI+ V+G QVM GY+K+ AT++
Sbjct: 403 SNKHKKLIIGTCGKILPGTVAEIRDADGNKLKKPG-KGILFVKGPQVMLGYYKDREATRR 461
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
+ DG+LNTGDI ++ + V+ + GR KDTIVL+ GENVEP +E
Sbjct: 462 IIGPDGFLNTGDIAKLSKDN----------VVQIIGREKDTIVLNNGENVEPAPIEIKLE 511
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEV 401
S LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 512 ESILIEKAVVVGQDQKFLGALILPNFEEI 540
>gi|219685905|ref|ZP_03540709.1| long-chain-fatty-acid CoA ligase [Borrelia garinii Far04]
gi|219672547|gb|EED29582.1| long-chain-fatty-acid CoA ligase [Borrelia garinii Far04]
Length = 630
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 141/389 (36%), Positives = 229/389 (58%), Gaps = 30/389 (7%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+ S+D+AT +YTSGTTGNPKGVML+H NLL+Q+ S +V + G F+ +LP WH ++R
Sbjct: 173 VDSNDMATIIYTSGTTGNPKGVMLSHANLLYQVSSFGLMVDTQVGQIFMCILPIWHSFQR 232
Query: 82 ACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
+ Y IF +G+ +++ + R + DD++ PHY+ +VP ++ + I K++
Sbjct: 233 SFSYNIFLKGMVCLFSTIVPRAMLDDIKNINPHYIAAVPRLWIAIRQNIYKEVSKKPFIS 292
Query: 140 RVVARALIRISF----AYTAFKRIY--EGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
R++ I+++F Y +Y GF L K+ + L IC L+P
Sbjct: 293 RIIFHFFIKLAFLNDICYRTVMGLYPDNGFNLFCPIKKILGIFGL--------IC--LFP 342
Query: 194 LHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
L L++ K+ +G + G++GGGS+P+ + F+ +IG+++ YGLTE+SP +A
Sbjct: 343 FKALGNILIFNKLNKILGNNFVVGITGGGSMPLSVARFFNSIGIELANAYGLTETSPGVA 402
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
+ + ++G+ G + T +I DA+ N++ G KGI+ V+G QVM GY+K+ AT++
Sbjct: 403 SNKHKKLIIGTCGKILPGTVAEIRDADGNKLKKPG-KGILFVKGPQVMLGYYKDREATRR 461
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
+ DG+LNTGDI ++ + V+ + GR KDTIVL+ GENVEP +E
Sbjct: 462 IIGPDGFLNTGDIAKLSKDN----------VVQIIGREKDTIVLNNGENVEPAPIEIKLE 511
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEV 401
S LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 512 ESILIEKAVVVGQDQKFLGALILPNFEEI 540
>gi|24217154|ref|NP_714637.1| long-chain-fatty-acid--CoA ligase [Leptospira interrogans serovar
Lai str. 56601]
gi|45655657|ref|YP_003466.1| long-chain-fatty-acid--CoA ligase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|386076113|ref|YP_005990302.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. IPAV]
gi|417759668|ref|ZP_12407702.1| AMP-binding enzyme [Leptospira interrogans str. 2002000624]
gi|417766351|ref|ZP_12414303.1| AMP-binding enzyme [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|417776506|ref|ZP_12424343.1| AMP-binding enzyme [Leptospira interrogans str. 2002000621]
gi|417786919|ref|ZP_12434604.1| AMP-binding enzyme [Leptospira interrogans str. C10069]
gi|418666198|ref|ZP_13227629.1| AMP-binding enzyme [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|418671279|ref|ZP_13232631.1| AMP-binding enzyme [Leptospira interrogans str. 2002000623]
gi|418690921|ref|ZP_13252028.1| AMP-binding enzyme [Leptospira interrogans str. FPW2026]
gi|418725531|ref|ZP_13284149.1| AMP-binding enzyme [Leptospira interrogans str. UI 12621]
gi|421086594|ref|ZP_15547442.1| AMP-binding enzyme [Leptospira santarosai str. HAI1594]
gi|421104017|ref|ZP_15564613.1| AMP-binding enzyme [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|421119509|ref|ZP_15579829.1| AMP-binding enzyme [Leptospira interrogans str. Brem 329]
gi|24202192|gb|AAN51652.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. 56601]
gi|45602628|gb|AAS72103.1| long-chain-fatty-acid--CoA ligase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|353459775|gb|AER04319.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. IPAV]
gi|400351178|gb|EJP03418.1| AMP-binding enzyme [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|400359957|gb|EJP15938.1| AMP-binding enzyme [Leptospira interrogans str. FPW2026]
gi|409944416|gb|EKN89999.1| AMP-binding enzyme [Leptospira interrogans str. 2002000624]
gi|409949771|gb|EKO04304.1| AMP-binding enzyme [Leptospira interrogans str. C10069]
gi|409961168|gb|EKO24915.1| AMP-binding enzyme [Leptospira interrogans str. UI 12621]
gi|410347660|gb|EKO98533.1| AMP-binding enzyme [Leptospira interrogans str. Brem 329]
gi|410366498|gb|EKP21890.1| AMP-binding enzyme [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410430623|gb|EKP74986.1| AMP-binding enzyme [Leptospira santarosai str. HAI1594]
gi|410573715|gb|EKQ36760.1| AMP-binding enzyme [Leptospira interrogans str. 2002000621]
gi|410581540|gb|EKQ49349.1| AMP-binding enzyme [Leptospira interrogans str. 2002000623]
gi|410758145|gb|EKR19744.1| AMP-binding enzyme [Leptospira interrogans serovar Pyrogenes str.
2006006960]
Length = 645
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 147/391 (37%), Positives = 219/391 (56%), Gaps = 24/391 (6%)
Query: 16 HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFL 70
H + I +D+AT VYTSGTTG PKGVMLTHKN++ + S ++ P D+ +
Sbjct: 182 HKRGSAIREEDLATIVYTSGTTGKPKGVMLTHKNIVFNVDSALQGEDLNVYPT---DRSM 238
Query: 71 SMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQK 130
+ LPPWH+ ER G +T++ +L DL +P ++SVP V+E+LY+ I
Sbjct: 239 AYLPPWHIAERLVETVCIRAGGAEAFTSISSLSQDLADIKPTLLLSVPRVWESLYNKIHD 298
Query: 131 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 190
++ SS ++ + A I+ Y +K + L + + S +L L + I +
Sbjct: 299 KVRNSSPVQQALFGAFKEIAITY--YKHLSRLQNLEYSLTEQSTFASLWQKLISFWIVIL 356
Query: 191 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
LW + +++ L + KI+ +G K +SG G+LP +ID F+ AIG+ + GYG+TE S
Sbjct: 357 LWIPNQISQ-LAFNKIKQGLGGELKFALSGAGALPQYIDTFFNAIGIPILEGYGMTELSG 415
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
+ R +G++G I +IK++D + NE+ G KGI +G VM+GY+K P
Sbjct: 416 ISTRRILGEITVGTLGRCIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYKEPEK 475
Query: 310 TKQALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 368
TK+ L DGWLN+GD + W G L GRAKDTIVL GEN+EP +E
Sbjct: 476 TKEILSSDGWLNSGDLLTWT-----------TSGELKYSGRAKDTIVLLGGENLEPEPIE 524
Query: 369 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
A +RS I+Q +VIG DQ+ GA+IVPD+E
Sbjct: 525 FALVRSRFIQQAMVIGHDQKTLGALIVPDRE 555
>gi|386826469|ref|ZP_10113576.1| AMP-forming long-chain acyl-CoA synthetase [Beggiatoa alba B18LD]
gi|386427353|gb|EIJ41181.1| AMP-forming long-chain acyl-CoA synthetase [Beggiatoa alba B18LD]
Length = 640
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 163/449 (36%), Positives = 242/449 (53%), Gaps = 40/449 (8%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD----IVPAENGDKFLSMLPPWHVYER 81
D+ T +YTSGTTG PKGVML H N++ QI S+ D +VP D+FLS+LP WH++ER
Sbjct: 182 DLFTLIYTSGTTGTPKGVMLPHSNMIAQIASVQDLPIQVVPE---DRFLSILPVWHIFER 238
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
G YT VR L +DL+ +P M S P ++E++Y I + +S R+
Sbjct: 239 VIEMVAVYYGAPTYYTNVRQLAEDLKTVRPTLMASAPRLWESIYQRILATLKNASPIRKT 298
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
+ + + + +G L + + L R+ AI + + L + +
Sbjct: 299 LFNLAYACARQFHLAQDFLKGNQLDITGRSAAESAGLTVLNLGRL--AIFFLPYKLLDTI 356
Query: 202 VYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
V K+++ G + VSGGG+LP HID F+ IG+ + GYGLTE V++ R V
Sbjct: 357 VLSKLRAVTGGCFRGTVSGGGALPRHIDEFFNFIGIPILEGYGLTEGM-VLSVRTFGQRV 415
Query: 261 LGSVGHPINHTEIKIVDAETNEVL---PA------GSKGIVKVRGSQVMQGYFKNPSATK 311
+G+VG T I+IVD TNEVL PA G +G + V+G QVM Y+KN AT
Sbjct: 416 IGTVGVLFPITTIRIVDINTNEVLYPNPAKKGEGRGLQGEIHVKGEQVMHSYYKNDEATA 475
Query: 312 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 371
+A EDGWLNTGD+G ++S L + GR+KDTIVL GENVEP+ +E
Sbjct: 476 KAFKEDGWLNTGDLGIFTFNNS----------LKITGRSKDTIVLLGGENVEPVPIETRL 525
Query: 372 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS--LLYG 429
+S LI Q +++GQD++ G ++VP L K+L I + +ELS++ + L+
Sbjct: 526 CQSDLIEQCMLVGQDKKTIGVLLVP----ALEGFKKLGITAENVAELSQQPAVREHLVQA 581
Query: 430 ELRKWTSKCSFQ----IGPIHVVDEPFTV 454
++K F+ I ++V+D+PF V
Sbjct: 582 VKTLISTKQGFKPFEVIQDVYVLDKPFEV 610
>gi|224532255|ref|ZP_03672887.1| long-chain-fatty-acid CoA ligase [Borrelia valaisiana VS116]
gi|224511720|gb|EEF82126.1| long-chain-fatty-acid CoA ligase [Borrelia valaisiana VS116]
Length = 630
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 152/451 (33%), Positives = 252/451 (55%), Gaps = 39/451 (8%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+ S+D+AT +YTSGTTG+PKGVML+H NLL+Q+ S +V + G F+ +LP WH ++R
Sbjct: 173 VDSNDMATIIYTSGTTGHPKGVMLSHANLLYQVSSFSLMVDTQLGQIFMCILPIWHSFQR 232
Query: 82 ACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
+ Y IF +G+ +++ + R + DD++ PHY+ +VP ++ + I K++
Sbjct: 233 SFSYNIFLKGMVCLFSTIVPRAMLDDIKNINPHYIAAVPRLWIAIRQNIYKEVSKKPFIS 292
Query: 140 RVVARALIRISF----AYTAFKRIY--EGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
R++ I+++F Y A Y GF L K+ + LI L+P
Sbjct: 293 RIIFHFFIKLAFLNDICYRAVMGFYPDSGFSLFFPIKKILGMFGLI----------FLFP 342
Query: 194 LHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
L L++ KI +G + G++GGGS+P+ + F+ AIG+++ YGLTE+SP +A
Sbjct: 343 FKALGNILIFNKINKILGNNFVVGITGGGSMPISVVRFFNAIGIELANAYGLTETSPGVA 402
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
+ + ++G+ G + T +I DA+ N++ G KGI+ V+G QVM GY+K+ AT +
Sbjct: 403 SNKHKKVIIGTCGKILPGTVAEIRDADGNKLKKPG-KGILFVKGPQVMLGYYKDREATCR 461
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
+ DG+LNTGDI ++ + V+ + GR KDTIVL+ GENVEP +E
Sbjct: 462 IIGSDGFLNTGDIVKLSKDN----------VVQIIGREKDTIVLNNGENVEPAPIEIKLE 511
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE----LSKEKTISLLY 428
S LI + VV+GQDQ+ GA+I+P+ EE+ + + DAS ++ + +
Sbjct: 512 ESILIEKAVVVGQDQKFLGALILPNFEEINKYLESVGQKIFDASNRRQIIANNIVLKAIN 571
Query: 429 GELRKWTSKCS-----FQIGPIHVVDEPFTV 454
E++K ++ + QI ++++PF V
Sbjct: 572 DEIKKLINRTNGFKPFEQILKFTLLEKPFEV 602
>gi|418710506|ref|ZP_13271276.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|410769095|gb|EKR44338.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|456966688|gb|EMG08222.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. LT2186]
Length = 645
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 147/391 (37%), Positives = 219/391 (56%), Gaps = 24/391 (6%)
Query: 16 HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFL 70
H + I +D+AT VYTSGTTG PKGVMLTHKN++ + S ++ P D+ +
Sbjct: 182 HKRGSAIREEDLATIVYTSGTTGKPKGVMLTHKNIVFNVDSALQGEDLNVYPT---DRSM 238
Query: 71 SMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQK 130
+ LPPWH+ ER G +T++ +L DL +P ++SVP V+E+LY+ I
Sbjct: 239 AYLPPWHIAERLVETVCIRAGGAEAFTSISSLSQDLADIKPTLLLSVPRVWESLYNKIHD 298
Query: 131 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 190
++ SS ++ + A I+ Y +K + L + + S +L L + I +
Sbjct: 299 KVRNSSPVQQALFGAFKEIAITY--YKHLSRLQNLEYSLTEQSTFASLWQKLISFWIVIL 356
Query: 191 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
LW + +++ L + KI+ +G K +SG G+LP +ID F+ AIG+ + GYG+TE S
Sbjct: 357 LWIPNQISQ-LAFNKIKQGLGGELKFALSGAGALPQYIDTFFNAIGIPILEGYGMTELSG 415
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
+ R +G++G I +IK++D + NE+ G KGI +G VM+GY+K P
Sbjct: 416 ISTRRILGEITVGTLGRCIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYKEPEK 475
Query: 310 TKQALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 368
TK+ L DGWLN+GD + W G L GRAKDTIVL GEN+EP +E
Sbjct: 476 TKEILSSDGWLNSGDLLTWT-----------TSGELKYSGRAKDTIVLLGGENLEPEPIE 524
Query: 369 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
A +RS I+Q +VIG DQ+ GA+IVPD+E
Sbjct: 525 FALVRSRFIQQAMVIGHDQKTLGALIVPDRE 555
>gi|418699116|ref|ZP_13260083.1| AMP-binding enzyme [Leptospira interrogans serovar Bataviae str.
L1111]
gi|421128285|ref|ZP_15588500.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421135813|ref|ZP_15595933.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410020118|gb|EKO86923.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410434010|gb|EKP83151.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|410761976|gb|EKR28147.1| AMP-binding enzyme [Leptospira interrogans serovar Bataviae str.
L1111]
gi|455793442|gb|EMF45140.1| AMP-binding enzyme [Leptospira interrogans serovar Lora str. TE
1992]
Length = 645
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 147/391 (37%), Positives = 219/391 (56%), Gaps = 24/391 (6%)
Query: 16 HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFL 70
H + I +D+AT VYTSGTTG PKGVMLTHKN++ + S ++ P D+ +
Sbjct: 182 HKRGSAIREEDLATIVYTSGTTGKPKGVMLTHKNIVFNVDSALQGEDLNVYPT---DRSM 238
Query: 71 SMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQK 130
+ LPPWH+ ER G +T++ +L DL +P ++SVP V+E+LY+ I
Sbjct: 239 AYLPPWHIAERLVETVCIRAGGAEAFTSISSLSQDLADIKPTLLLSVPRVWESLYNKIHD 298
Query: 131 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 190
++ SS ++ + A I+ Y +K + L + + S +L L + I +
Sbjct: 299 KVRNSSPVQQALFGAFKEIAITY--YKHLSRLQNLEYSLTEQSTFASLWQKLISFWIVIL 356
Query: 191 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
LW + +++ L + KI+ +G K +SG G+LP +ID F+ AIG+ + GYG+TE S
Sbjct: 357 LWIPNQISQ-LAFNKIKQGLGGELKFALSGAGALPQYIDTFFNAIGIPILEGYGMTELSG 415
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
+ R +G++G I +IK++D + NE+ G KGI +G VM+GY+K P
Sbjct: 416 ISTRRILGEITVGTLGRCIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYKEPEK 475
Query: 310 TKQALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 368
TK+ L DGWLN+GD + W G L GRAKDTIVL GEN+EP +E
Sbjct: 476 TKEILSSDGWLNSGDLLTWT-----------TSGELKYSGRAKDTIVLLGGENLEPEPIE 524
Query: 369 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
A +RS I+Q +VIG DQ+ GA+IVPD+E
Sbjct: 525 FALVRSRFIQQAMVIGHDQKTLGALIVPDRE 555
>gi|417772634|ref|ZP_12420522.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Pomona]
gi|418681870|ref|ZP_13243092.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|418704770|ref|ZP_13265637.1| AMP-binding enzyme [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|418712874|ref|ZP_13273603.1| AMP-binding enzyme [Leptospira interrogans str. UI 08452]
gi|421115985|ref|ZP_15576378.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|400326387|gb|EJO78654.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|409945311|gb|EKN95327.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Pomona]
gi|410012481|gb|EKO70579.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410765383|gb|EKR36083.1| AMP-binding enzyme [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|410790643|gb|EKR84335.1| AMP-binding enzyme [Leptospira interrogans str. UI 08452]
gi|455669836|gb|EMF34894.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str. Fox
32256]
Length = 645
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 147/391 (37%), Positives = 219/391 (56%), Gaps = 24/391 (6%)
Query: 16 HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFL 70
H + I +D+AT VYTSGTTG PKGVMLTHKN++ + S ++ P D+ +
Sbjct: 182 HKRGSAIREEDLATIVYTSGTTGKPKGVMLTHKNIVFNVDSALQGEDLNVYPT---DRSM 238
Query: 71 SMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQK 130
+ LPPWH+ ER G +T++ +L DL +P ++SVP V+E+LY+ I
Sbjct: 239 AYLPPWHIAERLVETVCIRAGGAEAFTSISSLSQDLADIKPTLLLSVPRVWESLYNKIHD 298
Query: 131 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 190
++ SS ++ + A I+ Y +K + L + + S +L L + I +
Sbjct: 299 KVRNSSPVQQALFGAFKEIAITY--YKHLSRLQNLEYSLTEQSTFASLWQKLISFWIVIL 356
Query: 191 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
LW + +++ L + KI+ +G K +SG G+LP +ID F+ AIG+ + GYG+TE S
Sbjct: 357 LWIPNQISQ-LAFNKIKQGLGGELKFALSGAGALPQYIDTFFNAIGIPILEGYGMTELSG 415
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
+ R +G++G I +IK++D + NE+ G KGI +G VM+GY+K P
Sbjct: 416 ISTRRILGEITVGTLGRCIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYKEPEK 475
Query: 310 TKQALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 368
TK+ L DGWLN+GD + W G L GRAKDTIVL GEN+EP +E
Sbjct: 476 TKEILSSDGWLNSGDLLTWT-----------TSGELKYSGRAKDTIVLLGGENLEPEPIE 524
Query: 369 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
A +RS I+Q +VIG DQ+ GA+IVPD+E
Sbjct: 525 FALVRSRFIQQAMVIGHDQKTLGALIVPDRE 555
>gi|421131450|ref|ZP_15591632.1| AMP-binding enzyme [Leptospira kirschneri str. 2008720114]
gi|410357233|gb|EKP04500.1| AMP-binding enzyme [Leptospira kirschneri str. 2008720114]
Length = 645
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 218/391 (55%), Gaps = 24/391 (6%)
Query: 16 HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFL 70
H + I +D+AT VYTSGTTG PKGVMLTHKN++ + S ++ P D+ +
Sbjct: 182 HKRGSAIREEDLATIVYTSGTTGKPKGVMLTHKNIVFNVDSALQGEDLNVYPT---DRSM 238
Query: 71 SMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQK 130
+ LPPWH+ ER G +T++ L DL +P ++SVP V+E+LY+ I
Sbjct: 239 AYLPPWHIAERLVETVCIRAGGAEAFTSISTLSQDLADIKPTLLLSVPRVWESLYNKIHD 298
Query: 131 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 190
++ SS ++ + A I+ Y +K + L + + S +L L + I +
Sbjct: 299 KVRNSSPVQQALFGAFKEIAITY--YKHLSRLQDLEYSLMEQSTFASLWQKLISLWIVIL 356
Query: 191 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
LW + +++ L + KI+ +G + +SG G+LP +ID F+ AIG+ + GYG+TE S
Sbjct: 357 LWIPNQISQ-LAFNKIKQGLGGELRFALSGAGALPQYIDTFFNAIGIPILEGYGMTELSG 415
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
+ R +G++G I +IK++D + NE+ G KGI +G VM+GY+K P
Sbjct: 416 ISTRRIFGEITVGTLGRCIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYKEPEK 475
Query: 310 TKQALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 368
TK+ L DGWLN+GD + W G L GRAKDTIVL GEN+EP +E
Sbjct: 476 TKEILSSDGWLNSGDLLAWT-----------TSGELKYSGRAKDTIVLLGGENLEPEPIE 524
Query: 369 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
A +RS I+Q +V+G DQ+ GA+IVPDKE
Sbjct: 525 FALVRSRFIQQAMVVGHDQKTLGALIVPDKE 555
>gi|418696753|ref|ZP_13257757.1| AMP-binding enzyme [Leptospira kirschneri str. H1]
gi|421105762|ref|ZP_15566340.1| AMP-binding enzyme [Leptospira kirschneri str. H2]
gi|409955363|gb|EKO14300.1| AMP-binding enzyme [Leptospira kirschneri str. H1]
gi|410009156|gb|EKO62814.1| AMP-binding enzyme [Leptospira kirschneri str. H2]
Length = 645
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 147/391 (37%), Positives = 218/391 (55%), Gaps = 24/391 (6%)
Query: 16 HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFL 70
H + I +D+AT VYTSGTTG PKGVMLTHKN++ + S ++ P D+ +
Sbjct: 182 HKRGSAIREEDLATIVYTSGTTGKPKGVMLTHKNIVFNVDSALQGEDLNVYPT---DRSM 238
Query: 71 SMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQK 130
+ LPPWH+ ER G +T+V L DL +P ++SVP V+E+LY+ I
Sbjct: 239 AYLPPWHIAERLVETVCIRAGGAEAFTSVSTLSQDLADIKPTLLLSVPRVWESLYNKIHD 298
Query: 131 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 190
++ SS ++ + A I+ Y +K + L + + S +L L + I +
Sbjct: 299 KVRNSSPVQQALFGAFKEIAITY--YKHLSRLQDLEYSLVEQSTFASLWQKLISLWIVIL 356
Query: 191 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
LW + +++ L + KI+ +G + +SG G+LP +ID F+ AIG+ + GYG+TE S
Sbjct: 357 LWIPNQISQ-LAFNKIKQGLGGELRFALSGAGALPQYIDTFFNAIGIPILEGYGMTELSG 415
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
+ R +G++G I +IK++D + NE+ G KGI +G VM+GY+K P
Sbjct: 416 ISTRRIFGEITVGTLGRCIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYKEPEK 475
Query: 310 TKQALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 368
TK+ L DGWLN+GD + W G L GRAKDTIVL GEN+EP +E
Sbjct: 476 TKEILSSDGWLNSGDLLAWT-----------TSGELKYSGRAKDTIVLLGGENLEPEPIE 524
Query: 369 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
A +RS I+Q +V+G DQ+ GA+IVPDKE
Sbjct: 525 FALVRSRFIQQAMVVGHDQKTLGALIVPDKE 555
>gi|408793900|ref|ZP_11205505.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408461135|gb|EKJ84865.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 671
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 147/437 (33%), Positives = 242/437 (55%), Gaps = 24/437 (5%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
D ++T +YTSGTTGNPKGVML+ K + I++ + + D +S+LPPWH +ERA
Sbjct: 220 DALSTLIYTSGTTGNPKGVMLSQKGWITAIQNTISRLDMNSNDNAVSLLPPWHAFERAIE 279
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
Y GI+ + + + +LKDDL+ ++P SVP ++E++Y+GI ++ + +
Sbjct: 280 YAGIFLGIDFLVSNMSSLKDDLRDFRPTIFPSVPRIWESVYNGIIAKVAKEGGFKEKLFH 339
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
+R + + + GF K+P+++V+L+ +A +I L PL L++ + ++
Sbjct: 340 FFLRFGSTWAHYYAMCFGFEF--EIKKPNFIVSLVKRTYAFLILVFLSPLKLISIQ-IFS 396
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
I A+G + +S G +LP +D F AIG+KV GYG+TE+S V++ R T G+
Sbjct: 397 AIHKALGGRIRICISAGSALPSVVDGFLSAIGLKVLEGYGMTETSAVVSIRSNTKPTKGT 456
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
VG PI +I++ D + G+KG + ++ Q+++GY+K P + D DG+ +TG
Sbjct: 457 VGIPIAGYQIRLKDDTGKILTDVGAKGTLWIKSKQILKGYYKRPELNQVVFDTDGFFDTG 516
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+ I+ + LV GR+KDTI L GENVEP+ +E+ L SS I Q++V+
Sbjct: 517 DLMMISHRNE----------LVFAGRSKDTIALIGGENVEPIPIEDKLLTSSFIDQVMVV 566
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKWTSKCS--- 439
G D++ GA+IVP+ E V K I A E + + LY E+ + S+ +
Sbjct: 567 GHDKKTLGALIVPNFEAV--ETKIPGISKEKADEWNANPKVRELYRAEISRIISRENGFK 624
Query: 440 -FQIGP---IHVVDEPF 452
F++ P +VV PF
Sbjct: 625 GFEMIPANNFYVVPRPF 641
>gi|386859368|ref|YP_006272074.1| Long-chain-fatty-acid CoA ligase [Borrelia crocidurae str. Achema]
gi|384934249|gb|AFI30922.1| Long-chain-fatty-acid CoA ligase [Borrelia crocidurae str. Achema]
Length = 629
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 222/385 (57%), Gaps = 18/385 (4%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
I +D+AT +YTSGTTGNPKGVML+H N L+Q+ S ++ G F+ +LP WH +
Sbjct: 171 NNISLNDMATIIYTSGTTGNPKGVMLSHANFLYQVSSFSRMISVTEGQIFMCILPIWHSF 230
Query: 80 ERACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
+R+ Y IF +G+ +++ + RN+ DD++ PHY+ +VP L+ I++ I +
Sbjct: 231 QRSFSYNIFLKGMTCLFSNIVPRNMLDDIRNINPHYIAAVP----RLWIAIKQNIVKEVS 286
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
+ R L RI + I L L+ + + + +L+PL++L
Sbjct: 287 KKNFFVRLLFRIFVKFACINDICRRIILGLYPDNGLDLLIPFKKILSILGVIVLFPLNVL 346
Query: 198 AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 256
+V+KKI+ +G + G+SGGGS+P+++ F+ AIG+ + YGLTE+SP +A+
Sbjct: 347 GNLIVFKKIKKVLGNNFVVGISGGGSIPLYVVRFFNAIGINLANAYGLTEASPGVASNEY 406
Query: 257 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 316
++G+ G + T +I D E L KG++ ++G QVM GY+++ AT+Q + +
Sbjct: 407 GKIIVGTSGKILPGTIAEIRD-ENGVKLKKPGKGVLFIKGPQVMIGYYQDIEATRQVIGD 465
Query: 317 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 376
DG+L+TGDI ++ + V+ + GR KDTIVL+ GEN+EP +E S L
Sbjct: 466 DGFLDTGDIVKLSKDN----------VVQIIGREKDTIVLNNGENIEPAPIEIKLEESLL 515
Query: 377 IRQIVVIGQDQRRPGAIIVPDKEEV 401
I + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 516 IEKAVVVGQDQKFLGALILPNFEEI 540
>gi|359689681|ref|ZP_09259682.1| long-chain-fatty-acid--CoA ligase [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418749980|ref|ZP_13306268.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
gi|418759027|ref|ZP_13315207.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|384113518|gb|EID99782.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|404274865|gb|EJZ42183.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
Length = 637
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 159/395 (40%), Positives = 232/395 (58%), Gaps = 39/395 (9%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I +D+ T +YT+GTTG PKGV LTHKN++ QI + + A G++ LS+LP WH +ER
Sbjct: 173 IQEEDLFTLIYTAGTTGRPKGVPLTHKNIMSQINRIPIKLAA--GERILSILPVWHSFER 230
Query: 82 ----ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
C YF G Y++VR LK+DL++ +P +M S P ++E++Y GI + SS+
Sbjct: 231 MFEMVCIYF----GAGTYYSSVRTLKEDLKKVKPTFMASAPRLWESVYQGIYATVAKSSS 286
Query: 138 ARRVVARALIRISFAYTAFKRIYEGF---CLTRNQKQPSYLVALIDWLWARIICAILWPL 194
++ + A + S + KR + GF LT S V + L + I I+ P
Sbjct: 287 VKQSLFHAALFFSSNIESAKR-WLGFRELDLTGRSAIVSLFVGIFKVL--QYILNII-PA 342
Query: 195 HLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 253
LL + +V KKI+ A G K VSGGG+LP+H+D F+ AIG++V GYGLTE+SPVI+
Sbjct: 343 TLL-DLIVLKKIRQATGGRLKGTVSGGGALPIHVDKFFNAIGIQVLEGYGLTETSPVISV 401
Query: 254 RRPTCNVLGSVGHPINHTEIKIVDAETNEVL-------PAG--SKGIVKVRGSQVMQGYF 304
R V+G+VG T +++VD T+++L P G KG + V+G QVM GY+
Sbjct: 402 RILNEAVMGTVGPLYKGTSLRVVDPNTSKILWTTEEGGPKGYAVKGEIHVKGDQVMSGYY 461
Query: 305 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 364
+P T++ ++ DGW NTGD+G + + C L + GR K+TIVL GENVEP
Sbjct: 462 HDPENTRKVMN-DGWFNTGDLGMMTYND-------C---LKIVGRTKETIVLLGGENVEP 510
Query: 365 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
+ +E +S I Q +VIGQDQ+ A+IVP+ E
Sbjct: 511 VPIENILSQSEFILQCMVIGQDQKYLSALIVPNPE 545
>gi|381181399|ref|ZP_09890233.1| AMP-dependent synthetase and ligase [Treponema saccharophilum DSM
2985]
gi|380766619|gb|EIC00624.1| AMP-dependent synthetase and ligase [Treponema saccharophilum DSM
2985]
Length = 652
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 149/419 (35%), Positives = 227/419 (54%), Gaps = 26/419 (6%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP-AENGDKFLSMLPPWHV 78
+ I DD+AT ++TSGTTG PKGV LTH N + Q + ++ + GD +L++LP WH
Sbjct: 190 DEISPDDVATIIFTSGTTGLPKGVQLTHDNYIAQCEVAHSVLGLMQPGDIWLTVLPIWHS 249
Query: 79 YERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
+ERA Y + + Y+ + D+ QP +M VP ++E + G+ +++ S
Sbjct: 250 FERAFCYMVVALEGGFAYSKPIASVMLQDMNLIQPQWMNVVPRLFEAVAQGLFREVKKQS 309
Query: 137 AARRVVARALIRISFAYTAFKRIYEGF-CLTRNQKQPSYLVALIDWLWARIICAILWPLH 195
++ I + Y K G C R + ++D LW + +LWPLH
Sbjct: 310 GMQQFFFHNAIIVGKMYYKMKERVLGLRCRYR------WYPRVLDVLWGIVPFVLLWPLH 363
Query: 196 LLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
++ E +YKK+++ G + +A +SGGG+L + FY AIG + GYG+TE +PVI+ R
Sbjct: 364 MIGEVTLYKKLRARFGGNFRAVISGGGALQPGTEAFYHAIGFNLLEGYGMTECAPVISVR 423
Query: 255 RPTCNVLGSVGHPINHTEIKIV-----DAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
+VG ++KIV E+ E L G +GI+ VRG QVM+GY+K P
Sbjct: 424 NSKKPRSNNVGWVFPSFDVKIVAEKDGKVESGEPLKPGRRGIIMVRGRQVMKGYYKRPDL 483
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T+ +D +GWLNTGD+G I+ L + GR KDTIVL GEN+EP +E+
Sbjct: 484 TEGVVDSEGWLNTGDLGMISYDEE----------LKIVGRTKDTIVLLGGENIEPQVIEK 533
Query: 370 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
A S I + VV+GQD+R GA+IVPD+ VL A+ +I++ + L + I L+
Sbjct: 534 AVNSSPYIERTVVVGQDKRYLGALIVPDQHSVLSYAEENNILYDNYEALLETNEIQNLF 592
>gi|203284063|ref|YP_002221803.1| long-chain-fatty-acid CoA ligase [Borrelia duttonii Ly]
gi|201083506|gb|ACH93097.1| long-chain-fatty-acid CoA ligase [Borrelia duttonii Ly]
Length = 629
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 222/385 (57%), Gaps = 18/385 (4%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
I +D+AT +YTSGTTGNPKGVML+H N L+Q+ S ++ G F+ +LP WH +
Sbjct: 171 NNISLNDMATIIYTSGTTGNPKGVMLSHANFLYQVSSFSRMISVTEGQIFMCILPIWHSF 230
Query: 80 ERACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
+R+ Y IF +G+ +++ + RN+ DD++ PHY+ +VP L+ I++ I +
Sbjct: 231 QRSFSYNIFLKGMTCLFSNIVPRNMLDDIRNINPHYIAAVP----RLWIAIKQNIVKEIS 286
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
+ R L RI + I L L+ + + + +L+PL++L
Sbjct: 287 KKNFFVRLLFRIFVKFACINDICRRIILGLYPDNGLDLLIPFKKILSILGVIVLFPLNVL 346
Query: 198 AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 256
+V+KKI+ +G + G+SGGGS+P+++ F+ AIG+ + YGLTE+SP +A+
Sbjct: 347 GNLIVFKKIKKVLGNNFVVGISGGGSIPLYVVRFFNAIGINLANAYGLTEASPGVASNEY 406
Query: 257 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 316
++G+ G + T +I D E L KG++ ++G QVM GY+++ AT+Q + +
Sbjct: 407 GKIIVGTSGKILPGTIAEIRD-ENGVKLKKPGKGVLFIKGPQVMIGYYQDIEATRQVIGD 465
Query: 317 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 376
DG+L+TGDI ++ + V+ + GR KDTIVL+ GEN+EP +E S L
Sbjct: 466 DGFLDTGDIVKLSKDN----------VVQIIGREKDTIVLNNGENIEPAPIEIKLEESLL 515
Query: 377 IRQIVVIGQDQRRPGAIIVPDKEEV 401
I + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 516 IEKAVVVGQDQKFLGALILPNFEEI 540
>gi|203287602|ref|YP_002222617.1| long-chain-fatty-acid CoA ligase [Borrelia recurrentis A1]
gi|201084822|gb|ACH94396.1| long-chain-fatty-acid CoA ligase [Borrelia recurrentis A1]
Length = 629
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 222/385 (57%), Gaps = 18/385 (4%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
I +D+AT +YTSGTTGNPKGVML+H N L+Q+ S ++ G F+ +LP WH +
Sbjct: 171 NNISLNDMATIIYTSGTTGNPKGVMLSHANFLYQVSSFSRMISVTEGQIFMCILPIWHSF 230
Query: 80 ERACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
+R+ Y IF +G+ +++ + RN+ DD++ PHY+ +VP L+ I++ I +
Sbjct: 231 QRSFSYNIFLKGMTCLFSNIVPRNMLDDIRNINPHYIAAVP----RLWIAIKQNIVKEIS 286
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
+ R L RI + I L L+ + + + +L+PL++L
Sbjct: 287 KKNFFVRLLFRIFVKFACISDICRRIILGLYPDNGLDLLIPFKKILSILGVIVLFPLNVL 346
Query: 198 AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 256
+V+KKI+ +G + G+SGGGS+P+++ F+ AIG+ + YGLTE+SP +A+
Sbjct: 347 GNLIVFKKIKKVLGNNFVVGISGGGSIPLYVVRFFNAIGINLANAYGLTEASPGVASNEY 406
Query: 257 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 316
++G+ G + T +I D E L KG++ ++G QVM GY+++ AT+Q + +
Sbjct: 407 GKIIVGTSGKILPGTIAEIRD-ENGVKLKKPGKGVLFIKGPQVMIGYYQDIEATRQVIGD 465
Query: 317 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 376
DG+L+TGDI ++ + V+ + GR KDTIVL+ GEN+EP +E S L
Sbjct: 466 DGFLDTGDIVKLSKDN----------VVQIIGREKDTIVLNNGENIEPAPIEIKLEESLL 515
Query: 377 IRQIVVIGQDQRRPGAIIVPDKEEV 401
I + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 516 IEKAVVVGQDQKFLGALILPNFEEI 540
>gi|418679673|ref|ZP_13240934.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|418684543|ref|ZP_13245727.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|418740250|ref|ZP_13296628.1| AMP-binding enzyme [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|421088000|ref|ZP_15548829.1| AMP-binding enzyme [Leptospira kirschneri str. 200802841]
gi|400320115|gb|EJO67988.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|410003256|gb|EKO53701.1| AMP-binding enzyme [Leptospira kirschneri str. 200802841]
gi|410740743|gb|EKQ85457.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|410752254|gb|EKR09229.1| AMP-binding enzyme [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 645
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 218/391 (55%), Gaps = 24/391 (6%)
Query: 16 HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFL 70
H + I +D+AT VYTSGTTG PKGVMLTHKN++ + S ++ P D+ +
Sbjct: 182 HKRGSAIREEDLATIVYTSGTTGKPKGVMLTHKNIVFNVDSALQGEDLNVYPT---DRSM 238
Query: 71 SMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQK 130
+ LPPWH+ ER G +T++ L DL +P ++SVP V+E+LY+ I
Sbjct: 239 AYLPPWHIAERLVETVCIRAGGAEAFTSISTLSQDLADIKPTLLLSVPRVWESLYNKIHD 298
Query: 131 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 190
++ SS ++ + A I+ Y +K + L + + S +L L + I +
Sbjct: 299 KVRNSSPVQQALFGAFKEIAITY--YKHLSRLQDLEYSLVEQSTFASLWQKLISLWIVIL 356
Query: 191 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
LW + +++ L + KI+ +G + +SG G+LP +ID F+ AIG+ + GYG+TE S
Sbjct: 357 LWIPNQISQ-LAFNKIKQGLGGELRFALSGAGALPQYIDTFFNAIGIPILEGYGMTELSG 415
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
+ R +G++G I +IK++D + NE+ G KGI +G VM+GY+K P
Sbjct: 416 ISTRRIFGEITVGTLGRCIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYKEPEK 475
Query: 310 TKQALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 368
TK+ L DGWLN+GD + W G L GRAKDTIVL GEN+EP +E
Sbjct: 476 TKEILSSDGWLNSGDLLAWT-----------TSGELKYSGRAKDTIVLLGGENLEPEPIE 524
Query: 369 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
A +RS I+Q +V+G DQ+ GA+IVPDKE
Sbjct: 525 FALVRSRFIQQAMVVGHDQKTLGALIVPDKE 555
>gi|386853545|ref|YP_006202830.1| Long-chain-fatty-acid CoA ligase [Borrelia garinii BgVir]
gi|365193579|gb|AEW68477.1| Long-chain-fatty-acid CoA ligase [Borrelia garinii BgVir]
Length = 630
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 249/451 (55%), Gaps = 39/451 (8%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+ S+D+AT +YTSGTTGNPKGVML+H N L+Q+ S +V + G F+ +LP WH ++R
Sbjct: 173 VDSNDMATIIYTSGTTGNPKGVMLSHANFLYQVSSFSLMVDTQVGQIFMCILPIWHSFQR 232
Query: 82 ACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
+ Y IF +G+ +++ + R + DD++ PHY+ +VP ++ + I K++
Sbjct: 233 SFSYNIFLKGMVCLFSTIVPRAMLDDIKNINPHYIAAVPRLWIAIRQNIYKEVSKKPFIS 292
Query: 140 RVVARALIRISFAYTAFKRIY------EGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
R++ I+++F RI GF L K+ + LI L+P
Sbjct: 293 RIIFHFFIKLAFLSDICYRIVMGLYPDNGFNLFFPIKKILGIFGLIS----------LFP 342
Query: 194 LHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
L L++ KI +G + G++GGGS+P+ + F+ +IG+++ YGLTE+SP +A
Sbjct: 343 FKALGNILIFNKINKILGNNFVVGITGGGSMPLSVARFFNSIGIELANAYGLTETSPGVA 402
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
+ + ++G+ G + T +I DA+ N++ G KGI+ V+G QVM GY+K+ AT +
Sbjct: 403 SNKHKKVIIGTCGKILPGTVAEIRDADGNKLKKPG-KGILFVKGPQVMLGYYKDREATCR 461
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
+ D +LNTGDI ++ + V+ + GR KDTIVL+ GENVEP +E
Sbjct: 462 IIGTDSFLNTGDIAKLSKDN----------VVQIIGREKDTIVLNNGENVEPAPIEIKLE 511
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE----LSKEKTISLLY 428
S LI + +V+GQDQ+ GA+I+P+ EE+ + + DA+ +S + +
Sbjct: 512 ESILIEKAIVVGQDQKFLGALILPNFEEINKYLESVGQKIFDANNRRQVISNNIVLKAIN 571
Query: 429 GELRKWTSKCS-----FQIGPIHVVDEPFTV 454
E++K ++ + QI ++++PF V
Sbjct: 572 DEIKKLINRTNGFKPFEQILKFTLLEKPFEV 602
>gi|410942242|ref|ZP_11374029.1| AMP-binding enzyme [Leptospira noguchii str. 2006001870]
gi|410782497|gb|EKR71501.1| AMP-binding enzyme [Leptospira noguchii str. 2006001870]
Length = 645
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 217/391 (55%), Gaps = 24/391 (6%)
Query: 16 HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFL 70
H + I +D+AT VYTSGTTG PKGVMLTHKN++ + S ++ P D+ +
Sbjct: 182 HKRGSAILEEDLATIVYTSGTTGKPKGVMLTHKNIVFNVDSALQGEDLNVYPT---DRSM 238
Query: 71 SMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQK 130
+ LPPWH+ ER G +T++ L DL +P ++SVP V+E+LY+ I
Sbjct: 239 AYLPPWHIAERLVETVCIRAGGAEAFTSISTLSQDLADIKPTLLLSVPRVWESLYNKIHD 298
Query: 131 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 190
++ SS ++ + A I+ Y ++ + L + + S +L L + I +
Sbjct: 299 KVRNSSPVQQALFGAFKEIAITY--YRHLSRLQDLEYSLVEQSTFASLWQKLISFWIVIL 356
Query: 191 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
LW + +++ L + KI+ +G K +SG G+LP +ID F+ AIG+ + GYG+TE S
Sbjct: 357 LWIPNQISQ-LAFNKIKQGLGGELKFALSGAGALPQYIDTFFNAIGIPILEGYGMTELSG 415
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
+ R +G++G I +IK++D + NE+ G KGI +G VM+GY+K P
Sbjct: 416 ISTRRILGEITVGTLGRCIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYKEPEK 475
Query: 310 TKQALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 368
TK L DGWLN+GD + W G L GRAKDTIVL GEN+EP +E
Sbjct: 476 TKDILSSDGWLNSGDLLAWT-----------TSGELKYSGRAKDTIVLLGGENLEPEPIE 524
Query: 369 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
A +RS I+Q +V+G DQ+ GA+IVPDKE
Sbjct: 525 FALVRSRFIQQAMVVGHDQKTLGALIVPDKE 555
>gi|408670769|ref|YP_006870840.1| long-chain-fatty-acid CoA ligase [Borrelia garinii NMJW1]
gi|407240591|gb|AFT83474.1| long-chain-fatty-acid CoA ligase [Borrelia garinii NMJW1]
Length = 630
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 249/451 (55%), Gaps = 39/451 (8%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+ S+D+AT +YTSGTTGNPKGVML+H N L+Q+ S +V + G F+ +LP WH ++R
Sbjct: 173 VDSNDMATIIYTSGTTGNPKGVMLSHANFLYQVSSFSLMVDTQVGQIFMCILPIWHSFQR 232
Query: 82 ACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
+ Y IF +G+ +++ + R + DD++ PHY+ +VP ++ + I K++
Sbjct: 233 SFSYNIFLKGMVCLFSTIVPRAMLDDIKSINPHYIAAVPRLWIAIRQNIYKEVSKKPFIS 292
Query: 140 RVVARALIRISFAYTAFKRIY------EGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
R++ I+++F RI GF L K+ + LI L+P
Sbjct: 293 RIIFHFFIKLAFLSDICYRIVMGLYPDNGFNLFFPIKKILGIFGLIS----------LFP 342
Query: 194 LHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
L L++ KI +G + G++GGGS+P+ + F+ +IG+++ YGLTE+SP +A
Sbjct: 343 FKALGNILIFNKINKILGNNFVVGITGGGSMPLSVARFFNSIGIELANAYGLTETSPGVA 402
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
+ + ++G+ G + T +I DA+ N++ G KGI+ V+G QVM GY+K+ AT +
Sbjct: 403 SNKHKKVIIGTCGKILPGTVAEIRDADGNKLKKPG-KGILFVKGPQVMLGYYKDREATCR 461
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
+ D +LNTGDI ++ + V+ + GR KDTIVL+ GENVEP +E
Sbjct: 462 IIGADSFLNTGDIAKLSKDN----------VVQIIGREKDTIVLNNGENVEPAPIEIKLE 511
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE----LSKEKTISLLY 428
S LI + +V+GQDQ+ GA+I+P+ EE+ + + DA+ +S + +
Sbjct: 512 ESILIEKAIVVGQDQKFLGALILPNFEEINKYLESVGQKIFDANNRRQVISNNIVLKAIN 571
Query: 429 GELRKWTSKCS-----FQIGPIHVVDEPFTV 454
E++K ++ + QI ++++PF V
Sbjct: 572 DEIKKLINRTNGFKPFEQILKFTLLEKPFEV 602
>gi|392403578|ref|YP_006440190.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
gi|390611532|gb|AFM12684.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
Length = 634
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 151/423 (35%), Positives = 228/423 (53%), Gaps = 34/423 (8%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+ DD+ T +YTSGTTGNPKGVM T K+L +I + D +P +G + LPPWHV ER
Sbjct: 180 VAEDDLVTIIYTSGTTGNPKGVMHTQKSLAWEIWHVADGLPLISGGVTMGFLPPWHVAER 239
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
++G+ + +T+V L DLQ +P +++SVP V+E+ Y+ + + +S
Sbjct: 240 LIESVALTKGVAIAFTSVATLAKDLQEARPTFLLSVPRVWESFYNKVIDGVKKASP---- 295
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQ---KQPSYLVALIDWLWARIICAILWPLHLLA 198
VA+ + + ++A E L+ + ++PS L L A + +L+ +LLA
Sbjct: 296 VAQKIFHFA-RWSAMHFSLEKDILSNTKYRLEKPSILFHLFRRPAALVNLVLLFIPNLLA 354
Query: 199 EKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
+ ++ K + G + +SG G+LP HID F+ +IG+ + YG+TE+ V R
Sbjct: 355 QVILAKVRRGLGGRVQFALSGAGALPEHIDRFFYSIGIAIVETYGMTETGGVTCRRTYPA 414
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
V+G+VG PI T +K++D NEV +KG+ G +M+GY+K T + L +DG
Sbjct: 415 TVIGTVGKPIKGTRVKLLDDHGNEVTKPNTKGVCWHTGPHIMKGYYKEDQKTSEVL-KDG 473
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
WLN+GDI G L GRAKDTIVL GENVEP +E+ ++S I
Sbjct: 474 WLNSGDI----------LVYTANGELKFAGRAKDTIVLFGGENVEPQPIEDTLIQSEYIH 523
Query: 379 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKC 438
QIVV+GQD++ GA+IVP KE VL +A+ ++L L E+R W
Sbjct: 524 QIVVVGQDKKTLGALIVPAKEAVLK--------YAEENKLQ-------LPAEMRDWPVNA 568
Query: 439 SFQ 441
Q
Sbjct: 569 DIQ 571
>gi|410678889|ref|YP_006931291.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii HLJ01]
gi|408536277|gb|AFU74408.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii HLJ01]
Length = 630
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 141/389 (36%), Positives = 227/389 (58%), Gaps = 30/389 (7%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+ S+D+AT +YTSGTTG+PKGVML+H NLL+Q+ S +V + G F+ +LP WH ++R
Sbjct: 173 VDSNDMATIIYTSGTTGHPKGVMLSHANLLYQVSSFSLMVDTKVGQIFMCILPIWHSFQR 232
Query: 82 ACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
+ Y IF +G+ +++ + R + DD++ PHY+ +VP ++ + I K++
Sbjct: 233 SFSYNIFLKGMVCLFSTIVPRAMLDDIRNINPHYIAAVPRLWIAIKQNIYKEVSKKPFIS 292
Query: 140 RVVARALIRISF----AYTAFKRIY--EGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
R++ I+++F Y A +Y GF L K+ L IC L+P
Sbjct: 293 RIIFHFFIKLAFLSDICYRAVMGLYPDNGFSLFFPMKKILGTFGL--------IC--LFP 342
Query: 194 LHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
L L++ KI +G + G++GGGS+P+ + F+ +IG+++ YGLTE+SP +A
Sbjct: 343 FKALGNILIFNKINKILGNNFVVGITGGGSMPVSVVRFFNSIGIELANAYGLTETSPGVA 402
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
+ + ++G+ G + T +I D + N++ G KGI+ V+G QVM GY+K+ AT +
Sbjct: 403 SNKHKKVIIGTCGKILPGTVAEIRDVDGNKLKKPG-KGILFVKGPQVMLGYYKDREATCK 461
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
+ DG+LNTGDI ++ + V+ + GR KDTIVL+ GENVEP +E
Sbjct: 462 IIGSDGFLNTGDIAKLSKDN----------VVQIIGREKDTIVLNNGENVEPGPIEIKLE 511
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEV 401
S LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 512 ESILIEKAVVVGQDQKFLGALILPNFEEI 540
>gi|398338188|ref|ZP_10522891.1| long-chain-fatty-acid--CoA ligase [Leptospira kirschneri serovar
Bim str. 1051]
Length = 645
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 145/391 (37%), Positives = 217/391 (55%), Gaps = 24/391 (6%)
Query: 16 HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFL 70
H + I +D+AT VYTSGTTG PKGVMLTHKN++ + ++ P D+ +
Sbjct: 182 HKRGSAIREEDLATIVYTSGTTGKPKGVMLTHKNIVFNVDGALQGEDLNVYPT---DRSM 238
Query: 71 SMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQK 130
+ LPPWH+ ER G +T++ L DL +P ++SVP V+E+LY+ I
Sbjct: 239 AYLPPWHIAERLVETVCIRAGGAEAFTSISTLSQDLADIKPTLLLSVPRVWESLYNKIHD 298
Query: 131 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 190
++ SS ++ + A I+ Y +K + L + + S +L L + I +
Sbjct: 299 KVRNSSPVQQALFGAFKEIAITY--YKHLSRLQDLEYSLVEQSTFASLWQKLISLWIVIL 356
Query: 191 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
LW + +++ L + KI+ +G + +SG G+LP +ID F+ AIG+ + GYG+TE S
Sbjct: 357 LWIPNQISQ-LAFNKIKQGLGGELRFALSGAGALPQYIDTFFNAIGIPILEGYGMTELSG 415
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
+ R +G++G I +IK++D + NE+ G KGI +G VM+GY+K P
Sbjct: 416 ISTRRIFGEITVGTLGRCIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYKEPEK 475
Query: 310 TKQALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 368
TK+ L DGWLN+GD + W G L GRAKDTIVL GEN+EP +E
Sbjct: 476 TKEILSSDGWLNSGDLLAWT-----------TSGELKYSGRAKDTIVLLGGENLEPEPIE 524
Query: 369 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
A +RS I+Q +V+G DQ+ GA+IVPDKE
Sbjct: 525 FALVRSRFIQQAMVVGHDQKTLGALIVPDKE 555
>gi|343127459|ref|YP_004777390.1| AMP-binding protein [Borrelia bissettii DN127]
gi|342222147|gb|AEL18325.1| AMP-binding enzyme family protein [Borrelia bissettii DN127]
Length = 630
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 150/451 (33%), Positives = 253/451 (56%), Gaps = 39/451 (8%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+ S+D+AT +YTSGTTG+PKGVML+H NLL+Q+ S +V + G F+ +LP WH ++R
Sbjct: 173 VDSNDMATIIYTSGTTGHPKGVMLSHANLLYQVSSFSLMVDTQVGQIFMCILPIWHSFQR 232
Query: 82 ACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
+ Y IF +G+ +++ + R + DD++ PHY+ +VP ++ + I K++
Sbjct: 233 SFSYNIFLKGMVCLFSTIVPRAMLDDIKNINPHYIAAVPRLWIAIRQNIYKEVSKKPFIS 292
Query: 140 RVVARALIRISF----AYTAFKRIY--EGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
R++ ++ +F Y +Y GF L K+ ++ L IC L+P
Sbjct: 293 RMIFHFFVKSAFLSDICYRVVMGLYPDNGFSLFFPIKKILGILGL--------IC--LFP 342
Query: 194 LHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
L L++ KI +G + G++GGGS+P+ F+ +IG+++ YGLTE+SP +A
Sbjct: 343 FKALGNILIFNKINKILGNNFVVGITGGGSMPLSAARFFNSIGIELANAYGLTETSPGVA 402
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
+ + ++G+ G + T +I DA+ N++ G KGI+ V+G QVM GY+K+ AT +
Sbjct: 403 SNKHKKVIIGTCGKILPGTVAEIRDADGNKLKKPG-KGILFVKGPQVMLGYYKDKEATCR 461
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
+ DG+LNTGDI ++ + V+ + GR KDTIVL+ GENVEP +E
Sbjct: 462 IIGPDGFLNTGDIAKLSKDN----------VVQIIGREKDTIVLNNGENVEPAPIEIKLE 511
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE----LSKEKTISLLY 428
S+LI + VV+GQDQ+ GA+I+P+ EE+ + + DA+ ++ + +
Sbjct: 512 ESALIEKAVVVGQDQKFLGALILPNFEEINKYLESVGQKIFDANNRRQIIANNIVLKAIN 571
Query: 429 GELRKWTSKCS-----FQIGPIHVVDEPFTV 454
E++K +K + QI ++++PF V
Sbjct: 572 DEIKKLINKTNGFKPFEQILKFTLLEKPFEV 602
>gi|216263809|ref|ZP_03435803.1| putative AMP-binding enzyme [Borrelia afzelii ACA-1]
gi|215979853|gb|EEC20675.1| putative AMP-binding enzyme [Borrelia afzelii ACA-1]
Length = 630
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 141/389 (36%), Positives = 227/389 (58%), Gaps = 30/389 (7%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+ S+D+AT +YTSGTTG+PKGVML+H NLL+Q+ S +V + G F+ +LP WH ++R
Sbjct: 173 VDSNDMATIIYTSGTTGHPKGVMLSHANLLYQVSSFSLMVDTKVGQIFMCILPIWHSFQR 232
Query: 82 ACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
+ Y IF +G+ +++ + R + DD++ PHY+ +VP ++ + I K++
Sbjct: 233 SFSYNIFLKGMVCLFSTIVPRAMLDDIRNINPHYIAAVPRLWIAIKQNIYKEVSKKPFIS 292
Query: 140 RVVARALIRISF----AYTAFKRIY--EGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
R++ I+++F Y A +Y GF L K+ L IC L+P
Sbjct: 293 RIIFHFFIKLAFLSDICYRAVMGLYPDNGFSLFFPIKKILGTFGL--------IC--LFP 342
Query: 194 LHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
L L++ KI +G + G++GGGS+P+ + F+ +IG+++ YGLTE+SP +A
Sbjct: 343 FKALGNILIFNKINKILGNNFVVGITGGGSMPVSVVRFFNSIGIELANAYGLTETSPGVA 402
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
+ + ++G+ G + T +I D + N++ G KGI+ V+G QVM GY+K+ AT +
Sbjct: 403 SNKHKRVIIGTCGKILPGTVAEIRDVDGNKLKKPG-KGILFVKGPQVMLGYYKDREATCK 461
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
+ DG+LNTGDI ++ + V+ + GR KDTIVL+ GENVEP +E
Sbjct: 462 IIGSDGFLNTGDIAKLSKDN----------VVQIIGREKDTIVLNNGENVEPGPIEIKLE 511
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEV 401
S LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 512 ESILIEKAVVVGQDQKFLGALILPNFEEI 540
>gi|225551923|ref|ZP_03772863.1| long-chain-fatty-acid CoA ligase [Borrelia sp. SV1]
gi|225370921|gb|EEH00351.1| long-chain-fatty-acid CoA ligase [Borrelia sp. SV1]
Length = 630
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 146/445 (32%), Positives = 250/445 (56%), Gaps = 27/445 (6%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+ S+D+AT +YTSGTTG+PKGVML+H NLL+Q+ S +V G F+ +LP WH ++R
Sbjct: 173 VDSNDMATIIYTSGTTGHPKGVMLSHANLLYQVSSFSLMVDTHVGQIFMCILPIWHSFQR 232
Query: 82 ACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
+ Y IF +G+ +++ + R + DD++ PHY+ +VP ++ + I K++
Sbjct: 233 SFSYNIFLKGMVCLFSTIVPRAMLDDIKNVNPHYIAAVPRLWIAIRQNIYKEVSKKPFIS 292
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
R++ ++ +F R+ G N + + I ++ +ICA +P L
Sbjct: 293 RMIFHFFVKAAFLSDICYRVVMGL-YPDNGFSLFFPIKKILGIFG-LICA--FPFKALGN 348
Query: 200 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
L++ KI +G + G++GGGS+P+ F+ +IG+++ YGLTE+SP +A+ +
Sbjct: 349 ILIFNKINKILGNNFVVGITGGGSMPLSAFRFFNSIGIELANAYGLTETSPGVASNKHKK 408
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
++G+ G + T +I D + N++ G KGI+ V+G QVM GY+K+ AT + + DG
Sbjct: 409 VIIGTCGKILPGTLAEIRDTDGNKLKKPG-KGILFVKGPQVMLGYYKDKEATCKIIGSDG 467
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
+LNTGDI ++ + V+ + GR KDTIVL+ GENVEP +E S+LI
Sbjct: 468 FLNTGDIAKLSKDN----------VVQIIGREKDTIVLNNGENVEPAPIEIKLEESALIE 517
Query: 379 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE----LSKEKTISLLYGELRKW 434
+ VV+GQDQ+ GA+I+P+ EE+ + + DA+ ++ + + E++K
Sbjct: 518 KAVVVGQDQKFLGALILPNFEEINKYLESVGQKIFDANNRRQIIANNIVLKAINDEIKKL 577
Query: 435 TSKCS-----FQIGPIHVVDEPFTV 454
+K + QI ++++PF V
Sbjct: 578 INKANGFKPFEQILKFTLLEKPFEV 602
>gi|387827058|ref|YP_005806340.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi N40]
gi|312149486|gb|ADQ29557.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi N40]
Length = 630
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 146/445 (32%), Positives = 250/445 (56%), Gaps = 27/445 (6%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+ S+D+AT +YTSGTTG+PKGVML+H NLL+Q+ S +V G F+ +LP WH ++R
Sbjct: 173 VDSNDMATIIYTSGTTGHPKGVMLSHANLLYQVSSFSLMVDTHVGQIFMCILPIWHSFQR 232
Query: 82 ACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
+ Y IF +G+ +++ + R + DD++ PHY+ +VP ++ + I K++
Sbjct: 233 SFSYNIFLKGMVCLFSTIVPRAMLDDIKNVNPHYIAAVPRLWIAIRQNIYKEVSKKPFIS 292
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
R++ ++ +F R+ G N + + I ++ +ICA +P L
Sbjct: 293 RMIFHFFVKAAFLSDICYRVVMGL-YPDNGFSLFFPIKKILGIFG-LICA--FPFKALGN 348
Query: 200 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
L++ KI +G + G++GGGS+P+ F+ +IG+++ YGLTE+SP +A+ +
Sbjct: 349 VLIFNKINKILGNNFVVGITGGGSMPLSAVRFFNSIGIELANAYGLTETSPGVASNKHKK 408
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
++G+ G + T +I D + N++ G KGI+ V+G QVM GY+K+ AT + + DG
Sbjct: 409 VIIGTCGKILPGTVAEIRDTDGNKLKKPG-KGILFVKGPQVMLGYYKDKEATCKIIGSDG 467
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
+LNTGDI ++ + V+ + GR KDTIVL+ GENVEP +E S+LI
Sbjct: 468 FLNTGDIAKLSKDN----------VVQIIGREKDTIVLNNGENVEPAPIEIKLEESALIE 517
Query: 379 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE----LSKEKTISLLYGELRKW 434
+ VV+GQDQ+ GA+I+P+ EE+ + + DA+ ++ + + E++K
Sbjct: 518 KAVVVGQDQKFLGALILPNFEEINKYLESVGQKIFDANNRRQIIANNIVLKAINDEIKKL 577
Query: 435 TSKCS-----FQIGPIHVVDEPFTV 454
+K + QI ++++PF V
Sbjct: 578 INKANGFKPFEQILKFTLLEKPFEV 602
>gi|119953377|ref|YP_945586.1| long-chain-fatty-acid--CoA ligase [Borrelia turicatae 91E135]
gi|119862148|gb|AAX17916.1| long-chain-fatty-acid--CoA ligase [Borrelia turicatae 91E135]
Length = 643
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 151/427 (35%), Positives = 234/427 (54%), Gaps = 33/427 (7%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHV 78
E + DIAT +YTSGTTG PKGV+L H++ + Q+ + D +P + G +S+LP WH
Sbjct: 178 EKVSGKDIATIIYTSGTTGLPKGVVLRHESFIFQVDRIGDYLPTIKPGKIMISILPLWHS 237
Query: 79 YERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
+ER C Y + G+ + Y+ L D PH +ISVP ++E + GI K++ + S
Sbjct: 238 FERTCEYIVALNGMAIAYSKPIGPVLLKDFAALNPHAIISVPRIWEGIRIGIMKRV-SES 296
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC----AILW 192
+R + ++I Y K + G L K+ ++LV++ + ++ C +
Sbjct: 297 FFKRFLFNFFLKIGILYIKLKEKFLG--LVPVYKRSNFLVSI----FIKVACLTGLIFIL 350
Query: 193 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
P L LV++KI+ A+G + GVSGGG+L ++D F++A+G+ V GYGLTE+ PV+
Sbjct: 351 PFKFLGHVLVFRKIKKALGKRFEFGVSGGGALVNYVDYFFKAVGIMVLEGYGLTETGPVL 410
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 311
+ RR V +VG E ++V + N + P G KG + VR QVM GYFK+ + T+
Sbjct: 411 SVRRFKSPVANTVGPLFPDIEYRVVGNDGNFLSP-GEKGELWVRSPQVMSGYFKDDTTTR 469
Query: 312 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 371
+ L DGW TGD+ ++ + + GR+KDTIVL GEN+EP +E A
Sbjct: 470 EVLTRDGWFKTGDLVCATINNE----------ISIVGRSKDTIVLRGGENIEPESIERAL 519
Query: 372 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGEL 431
+S I +VV+GQDQ+ GAIIVP+ E + A I+ +L ++++ LY
Sbjct: 520 SKSLFIENVVVVGQDQKFLGAIIVPNFEVLEKWAGSNEIIFDSHDDLLSNESVNKLY--- 576
Query: 432 RKWTSKC 438
SKC
Sbjct: 577 ----SKC 579
>gi|294462826|gb|ADE76955.1| unknown [Picea sitchensis]
Length = 272
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 123/242 (50%), Positives = 174/242 (71%), Gaps = 1/242 (0%)
Query: 214 KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEI 273
K G++ G S+P+H+D F+EAIG+ + YGLTE + + + R CNVLG+ G P++ E+
Sbjct: 2 KIGLTAGASIPLHVDQFFEAIGITLLNAYGLTEMTSIYSGRNTECNVLGTAGLPLHGIEV 61
Query: 274 KIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHS 333
K+VD ET +L +G KG++KVRG Q+M+GY+KN AT +A+D+D WL+TGD+GW+A
Sbjct: 62 KVVDPETGAILKSGEKGLIKVRGPQLMKGYYKNIDATMKAIDKDNWLDTGDLGWLASQKP 121
Query: 334 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 393
RRCGG++V+EGRAKDTIVLSTGENVEP+E+E AAL S+LI QIVV+GQDQRR GA+
Sbjct: 122 G-GGRRCGGMMVVEGRAKDTIVLSTGENVEPIEIEAAALESNLIEQIVVVGQDQRRLGAL 180
Query: 394 IVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFT 453
IVP+ E + + A+ L+ S+ + L+ EL + TS+C F IGP +++E FT
Sbjct: 181 IVPNMEAIQLEARELAKSKGITSQPTVGDFKELIRRELIEHTSRCPFHIGPFVLLEEHFT 240
Query: 454 VN 455
V+
Sbjct: 241 VD 242
>gi|226320671|ref|ZP_03796229.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 29805]
gi|226233887|gb|EEH32610.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 29805]
Length = 630
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 146/445 (32%), Positives = 250/445 (56%), Gaps = 27/445 (6%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+ S+D+AT +YTSGTTG+PKGVML+H NLL+Q+ S +V G F+ +LP WH ++R
Sbjct: 173 VDSNDMATIIYTSGTTGHPKGVMLSHANLLYQVSSFSLMVDTHVGQIFMCILPIWHSFQR 232
Query: 82 ACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
+ Y IF +G+ +++ + R + DD++ PHY+ +VP ++ + I K++
Sbjct: 233 SFSYNIFLKGMVCLFSTIVPRAMLDDIKNVNPHYIAAVPRLWIAIRQNIYKEVSKKPFIS 292
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
R++ ++ +F R+ G N + + I ++ +ICA +P L
Sbjct: 293 RMIFHFFVKAAFLSDICYRVVMGL-YPDNGFSLFFPIKKILGIFG-LICA--FPFKALGN 348
Query: 200 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
L++ KI +G + G++GGGS+P+ F+ +IG+++ YGLTE+SP +A+ +
Sbjct: 349 VLIFNKINKILGNNFVVGITGGGSMPLSAVRFFNSIGIELANAYGLTETSPGVASNKHKK 408
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
++G+ G + T +I D + N++ G KGI+ V+G QVM GY+K+ AT + + DG
Sbjct: 409 VIIGTCGKILPGTVAEIRDIDGNKLKKPG-KGILFVKGPQVMLGYYKDKEATCKIIGSDG 467
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
+LNTGDI ++ + V+ + GR KDTIVL+ GENVEP +E S+LI
Sbjct: 468 FLNTGDIAKLSKDN----------VVQIIGREKDTIVLNNGENVEPAPIEIKLEESALIE 517
Query: 379 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE----LSKEKTISLLYGELRKW 434
+ VV+GQDQ+ GA+I+P+ EE+ + + DA+ ++ + + E++K
Sbjct: 518 KAVVVGQDQKFLGALILPNFEEINKYLESVGQKIFDANNRRQIIANNIVLKAINDEIKKL 577
Query: 435 TSKCS-----FQIGPIHVVDEPFTV 454
+K + QI ++++PF V
Sbjct: 578 INKANGFKPFEQILKFTLLEKPFEV 602
>gi|15594482|ref|NP_212271.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi B31]
gi|195941874|ref|ZP_03087256.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 80a]
gi|195942358|ref|ZP_03087740.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 80a]
gi|195942377|ref|ZP_03087759.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 80a]
gi|195942400|ref|ZP_03087782.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 80a]
gi|218249890|ref|YP_002374665.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi ZS7]
gi|223889090|ref|ZP_03623679.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 64b]
gi|226321952|ref|ZP_03797477.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi Bol26]
gi|2688028|gb|AAC66529.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi B31]
gi|218165078|gb|ACK75139.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi ZS7]
gi|223885339|gb|EEF56440.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 64b]
gi|226232542|gb|EEH31296.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi Bol26]
Length = 630
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 146/445 (32%), Positives = 250/445 (56%), Gaps = 27/445 (6%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+ S+D+AT +YTSGTTG+PKGVML+H NLL+Q+ S +V G F+ +LP WH ++R
Sbjct: 173 VDSNDMATIIYTSGTTGHPKGVMLSHANLLYQVSSFSLMVDTHVGQIFMCILPIWHSFQR 232
Query: 82 ACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
+ Y IF +G+ +++ + R + DD++ PHY+ +VP ++ + I K++
Sbjct: 233 SFSYNIFLKGMVCLFSTIVPRAMLDDIKNVNPHYIAAVPRLWIAIRQNIYKEVSKKPFIS 292
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
R++ ++ +F R+ G N + + I ++ +ICA +P L
Sbjct: 293 RMIFHFFVKAAFLSDICYRVVMGL-YPDNGFSLFFPIKKILGIFG-LICA--FPFKALGN 348
Query: 200 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
L++ KI +G + G++GGGS+P+ F+ +IG+++ YGLTE+SP +A+ +
Sbjct: 349 VLIFNKINKILGNNFVVGITGGGSMPLSAVRFFNSIGIELANAYGLTETSPGVASNKHKK 408
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
++G+ G + T +I D + N++ G KGI+ V+G QVM GY+K+ AT + + DG
Sbjct: 409 VIIGTCGKILPGTVAEIRDIDGNKLKKPG-KGILFVKGPQVMLGYYKDKEATCKIIGSDG 467
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
+LNTGDI ++ + V+ + GR KDTIVL+ GENVEP +E S+LI
Sbjct: 468 FLNTGDIAKLSKDN----------VVQIIGREKDTIVLNNGENVEPAPIEIKLEESALIE 517
Query: 379 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE----LSKEKTISLLYGELRKW 434
+ VV+GQDQ+ GA+I+P+ EE+ + + DA+ ++ + + E++K
Sbjct: 518 KAVVVGQDQKFLGALILPNFEEINKYLESVGQKIFDANNRRQIIANNIVLKAINDEIKKL 577
Query: 435 TSKCS-----FQIGPIHVVDEPFTV 454
+K + QI ++++PF V
Sbjct: 578 INKANGFKPFEQILKFTLLEKPFEV 602
>gi|221217462|ref|ZP_03588933.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 72a]
gi|224533985|ref|ZP_03674569.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi CA-11.2a]
gi|225549859|ref|ZP_03770821.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 118a]
gi|221192740|gb|EEE18956.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 72a]
gi|224512821|gb|EEF83188.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi CA-11.2a]
gi|225369550|gb|EEG99001.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 118a]
Length = 630
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 146/445 (32%), Positives = 250/445 (56%), Gaps = 27/445 (6%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+ S+D+AT +YTSGTTG+PKGVML+H NLL+Q+ S +V G F+ +LP WH ++R
Sbjct: 173 VDSNDMATIIYTSGTTGHPKGVMLSHANLLYQVSSFSLMVDTHVGQIFMCILPIWHSFQR 232
Query: 82 ACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
+ Y IF +G+ +++ + R + DD++ PHY+ +VP ++ + I K++
Sbjct: 233 SFSYNIFLKGMVCLFSTIVPRAMLDDIKNVNPHYIAAVPRLWIAIRQNIYKEVSKKPFIS 292
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
R++ ++ +F R+ G N + + I ++ +ICA +P L
Sbjct: 293 RMIFHFFVKAAFLSDICYRVVMGL-YPDNGFSLFFPIKKILGIFG-LICA--FPFKALGN 348
Query: 200 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
L++ KI +G + G++GGGS+P+ F+ +IG+++ YGLTE+SP +A+ +
Sbjct: 349 VLIFNKINKILGNNFVVGITGGGSMPLSAVRFFNSIGIELANAYGLTETSPGVASNKHKK 408
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
++G+ G + T +I D + N++ G KGI+ V+G QVM GY+K+ AT + + DG
Sbjct: 409 VIIGTCGKILPGTVAEIRDIDGNKLKKPG-KGILFVKGPQVMLGYYKDKEATCKIIGSDG 467
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
+LNTGDI ++ + V+ + GR KDTIVL+ GENVEP +E S+LI
Sbjct: 468 FLNTGDIAKLSKDN----------VVQIIGREKDTIVLNNGENVEPAPIEIKLEESALIE 517
Query: 379 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE----LSKEKTISLLYGELRKW 434
+ VV+GQDQ+ GA+I+P+ EE+ + + DA+ ++ + + E++K
Sbjct: 518 KAVVVGQDQKFLGALILPNFEEINKYLESVGQKIFDANNRRQIIANNIVLKAINDEIKKL 577
Query: 435 TSKCS-----FQIGPIHVVDEPFTV 454
+K + QI ++++PF V
Sbjct: 578 INKANGFKPFEQILKFTLLEKPFEV 602
>gi|225549259|ref|ZP_03770232.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 94a]
gi|225370117|gb|EEG99557.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 94a]
Length = 630
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 146/445 (32%), Positives = 250/445 (56%), Gaps = 27/445 (6%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+ S+D+AT +YTSGTTG+PKGVML+H NLL+Q+ S +V G F+ +LP WH ++R
Sbjct: 173 VDSNDMATIIYTSGTTGHPKGVMLSHANLLYQVSSFSLMVDTHVGQIFMCILPIWHSFQR 232
Query: 82 ACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
+ Y IF +G+ +++ + R + DD++ PHY+ +VP ++ + I K++
Sbjct: 233 SFSYNIFLKGMVCLFSTIVPRAMLDDIKNVNPHYIAAVPRLWIAIRQNIYKEVSKKPFIS 292
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
R++ ++ +F R+ G N + + I ++ +ICA +P L
Sbjct: 293 RMIFHFFVKAAFLSDICYRVVMGL-YPDNGFSLFFPIKKILGIFG-LICA--FPFKALGN 348
Query: 200 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
L++ KI +G + G++GGGS+P+ F+ +IG+++ YGLTE+SP +A+ +
Sbjct: 349 VLIFNKINKILGNNFVVGITGGGSMPLSAVRFFNSIGIELANAYGLTETSPGVASNKHKK 408
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
++G+ G + T +I D + N++ G KGI+ V+G QVM GY+K+ AT + + DG
Sbjct: 409 VIIGTCGKILPGTVAEIRDIDGNKLKKPG-KGILFVKGPQVMLGYYKDKEATCKIIGSDG 467
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
+LNTGDI ++ + V+ + GR KDTIVL+ GENVEP +E S+LI
Sbjct: 468 FLNTGDIAKLSKDN----------VVQIIGREKDTIVLNNGENVEPAPIEIKLEESALIE 517
Query: 379 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE----LSKEKTISLLYGELRKW 434
+ VV+GQDQ+ GA+I+P+ EE+ + + DA+ ++ + + E++K
Sbjct: 518 KAVVVGQDQKFLGALILPNFEEINKYLESVGQKIFDANNRRQIIANNIVLKAINDEIKKL 577
Query: 435 TSKCS-----FQIGPIHVVDEPFTV 454
+K + QI ++++PF V
Sbjct: 578 INKANGFKPFEQILKFTLLEKPFEV 602
>gi|216264699|ref|ZP_03436691.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 156a]
gi|215981172|gb|EEC21979.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 156a]
Length = 630
Score = 240 bits (613), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 146/445 (32%), Positives = 250/445 (56%), Gaps = 27/445 (6%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+ S+D+AT +YTSGTTG+PKGVML+H NLL+Q+ S +V G F+ +LP WH ++R
Sbjct: 173 VDSNDMATIIYTSGTTGHPKGVMLSHANLLYQVSSFSLMVDTHVGQIFMCILPIWHSFQR 232
Query: 82 ACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
+ Y IF +G+ +++ + R + DD++ PHY+ +VP ++ + I K++
Sbjct: 233 SFSYNIFLKGMVCLFSTIVPRAMLDDIKNVNPHYIAAVPRLWIAIRQNIYKEVSKKPFIS 292
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
R++ ++ +F R+ G N + + I ++ +ICA +P L
Sbjct: 293 RMIFHFFVKAAFLSDICYRVVMGL-YPDNGFSLFFPIKKILGIFG-LICA--FPFKALGN 348
Query: 200 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
L++ KI +G + G++GGGS+P+ F+ +IG+++ YGLTE+SP +A+ +
Sbjct: 349 VLIFNKINKILGNNFVVGITGGGSMPLSAVRFFNSIGIELANAYGLTETSPGVASNKHKK 408
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
++G+ G + T +I D + N++ G KGI+ V+G QVM GY+K+ AT + + DG
Sbjct: 409 VIIGTCGKILPGTVAEIRDIDGNKLKKPG-KGILFVKGPQVMLGYYKDKEATCKIIGSDG 467
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
+LNTGDI ++ + V+ + GR KDTIVL+ GENVEP +E S+LI
Sbjct: 468 FLNTGDIAKLSKDN----------VVQIIGREKDTIVLNNGENVEPAPIEIKLEESALIE 517
Query: 379 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE----LSKEKTISLLYGELRKW 434
+ VV+GQDQ+ GA+I+P+ EE+ + + DA+ ++ + + E++K
Sbjct: 518 KAVVVGQDQKFLGALILPNFEEINKYLESVGQKIFDANNRRQIIANNIVLKAINDEIKKL 577
Query: 435 TSKCS-----FQIGPIHVVDEPFTV 454
+K + QI ++++PF V
Sbjct: 578 INKANGFKPFEQILKFTLLEKPFEV 602
>gi|387825795|ref|YP_005805248.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi JD1]
gi|312147986|gb|ADQ30645.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi JD1]
Length = 630
Score = 240 bits (613), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 146/445 (32%), Positives = 250/445 (56%), Gaps = 27/445 (6%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+ S+D+AT +YTSGTTG+PKGVML+H NLL+Q+ S +V G F+ +LP WH ++R
Sbjct: 173 VDSNDMATIIYTSGTTGHPKGVMLSHANLLYQVSSFSLMVDTHVGQIFMCILPIWHSFQR 232
Query: 82 ACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
+ Y IF +G+ +++ + R + DD++ PHY+ +VP ++ + I K++
Sbjct: 233 SFSYNIFLKGMVCLFSTIVPRAMLDDIKNVNPHYIAAVPRLWIAIRQNIYKEVSKKPFIS 292
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
R++ ++ +F R+ G N + + I ++ +ICA +P L
Sbjct: 293 RMIFHFFVKAAFLSDICYRVVMGL-YPDNGFSLFFPIKKILGIFG-LICA--FPFKALGS 348
Query: 200 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
L++ KI +G + G++GGGS+P+ F+ +IG+++ YGLTE+SP +A+ +
Sbjct: 349 VLIFNKINKILGNNFVVGITGGGSMPLSAVRFFNSIGIELANAYGLTETSPGVASNKHKK 408
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
++G+ G + T +I D + N++ G KGI+ V+G QVM GY+K+ AT + + DG
Sbjct: 409 VIIGTCGKILPGTVAEIRDIDGNKLKKPG-KGILFVKGPQVMLGYYKDKEATCKIIGSDG 467
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
+LNTGDI ++ + V+ + GR KDTIVL+ GENVEP +E S+LI
Sbjct: 468 FLNTGDIAKLSKDN----------VVQIIGREKDTIVLNNGENVEPAPIEIKLEESALIE 517
Query: 379 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE----LSKEKTISLLYGELRKW 434
+ VV+GQDQ+ GA+I+P+ EE+ + + DA+ ++ + + E++K
Sbjct: 518 KAVVVGQDQKFLGALILPNFEEINKYLESVGQKIFDANNRRQIIANNIVLKAINDEIKKL 577
Query: 435 TSKCS-----FQIGPIHVVDEPFTV 454
+K + QI ++++PF V
Sbjct: 578 INKANGFKPFEQILKFTLLEKPFEV 602
>gi|224532780|ref|ZP_03673396.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi WI91-23]
gi|224512268|gb|EEF82653.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi WI91-23]
Length = 617
Score = 240 bits (613), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 225/383 (58%), Gaps = 18/383 (4%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+ S+D+AT +YTSGTTG+PKGVML+H NLL+Q+ S +V G F+ +LP WH ++R
Sbjct: 173 VDSNDMATIIYTSGTTGHPKGVMLSHANLLYQVSSFSLMVDTHVGQIFMCILPIWHSFQR 232
Query: 82 ACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
+ Y IF +G+ +++ + R + DD++ PHY+ +VP ++ + I K++
Sbjct: 233 SFSYNIFLKGMVCLFSTIVPRAMLDDIKNVNPHYIAAVPRLWIAIRQNIYKEVSKKPFIS 292
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
R++ ++ +F R+ G N + + I ++ +ICA +P L
Sbjct: 293 RMIFHFFVKAAFLSDICYRVVMGL-YPDNGFSLFFPIKKILGIFG-LICA--FPFKALGN 348
Query: 200 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
L++ KI +G + G++GGGS+P+ F+ +IG+++ YGLTE+SP +A+ +
Sbjct: 349 VLIFNKINKILGNNFVVGITGGGSMPLSAVRFFNSIGIELANAYGLTETSPGVASNKHKK 408
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
++G+ G + T +I D + N++ G KGI+ V+G QVM GY+K+ AT + + DG
Sbjct: 409 VIIGTCGKILPGTVAEIRDTDGNKLKKPG-KGILFVKGPQVMLGYYKDKEATCKIIGSDG 467
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
+LNTGDI ++ + V+ + GR KDTIVL+ GENVEP +E S+LI
Sbjct: 468 FLNTGDIAKLSKDN----------VVQIIGREKDTIVLNNGENVEPAPIEIKLEESALIE 517
Query: 379 QIVVIGQDQRRPGAIIVPDKEEV 401
+ VV+GQDQ+ GA+I+P+ EE+
Sbjct: 518 KAVVVGQDQKFLGALILPNFEEI 540
>gi|111114960|ref|YP_709578.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii PKo]
gi|384206637|ref|YP_005592358.1| AMP-binding protein [Borrelia afzelii PKo]
gi|110890234|gb|ABH01402.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii PKo]
gi|342856520|gb|AEL69368.1| AMP-binding enzyme family protein [Borrelia afzelii PKo]
Length = 630
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 141/389 (36%), Positives = 227/389 (58%), Gaps = 30/389 (7%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+ S+D+AT +YTSGTTG+PKGVML+H NLL+Q+ S +V + G F+ +LP WH ++R
Sbjct: 173 VDSNDMATIIYTSGTTGHPKGVMLSHANLLYQVSSFSLMVDTKVGQIFMCILPIWHSFQR 232
Query: 82 ACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
+ Y IF +G+ +++ + R + DD++ PHY+ +VP ++ + I K++
Sbjct: 233 SFSYNIFLKGMVCLFSTIVPRAMLDDIRNINPHYIAAVPRLWIAIKQNIYKEVSKKPFIS 292
Query: 140 RVVARALIRISF----AYTAFKRIY--EGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
R++ I+++F Y A +Y GF L K+ L IC L+P
Sbjct: 293 RIIFHFFIKLAFLSDICYRAVMGLYPDNGFSLFFPIKKILGTFGL--------IC--LFP 342
Query: 194 LHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
L L++ KI +G + G++GGGS+P+ + F+ +IG+++ YGLTE+SP +A
Sbjct: 343 FKALGNILIFNKINKILGNNFVVGITGGGSMPVPVVRFFNSIGIELANAYGLTETSPGVA 402
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
+ + ++G+ G + T +I D + N++ G KGI+ V+G QVM GY+K+ AT +
Sbjct: 403 SNKHKRVIIGTCGKILPGTVAEIRDVDGNKLKKPG-KGILFVKGPQVMLGYYKDREATCK 461
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
+ DG+LNTGDI ++ + V+ + GR KDTIVL+ GENVEP +E
Sbjct: 462 IIGSDGFLNTGDIAKLSKDN----------VVQIIGREKDTIVLNNGENVEPGPIEIKLE 511
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEV 401
S LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 512 ESILIEKAVVVGQDQKFLGALILPNFEEI 540
>gi|384107950|ref|ZP_10008847.1| Long-chain acyl-CoA synthetase (AMP-forming) [Treponema sp. JC4]
gi|383870334|gb|EID85937.1| Long-chain acyl-CoA synthetase (AMP-forming) [Treponema sp. JC4]
Length = 652
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 145/407 (35%), Positives = 220/407 (54%), Gaps = 23/407 (5%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E DD+AT ++TSGTTG PKGVMLTH N + Q+ ++D + + GD ++++LP WHV+
Sbjct: 191 EATSPDDVATMIFTSGTTGTPKGVMLTHNNYISQLSVIHDFITCKQGDWWMTILPVWHVF 250
Query: 80 ERACGYFIFSRGIELMYT--AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
ER Y L Y+ A L D+ +P ++ VP ++E L SG+ + + +
Sbjct: 251 ERLIQYVAVHMKCGLAYSKPAAPVLLPDMAVIRPQWICGVPRLWEALASGVIRTMKKTGG 310
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
+ I Y + G N Q L+D + I +LWPLH L
Sbjct: 311 LTLKLFNFFIGAGSLYAKMRDYVFG-----NIPQFKKRCRLLDSIIGFIPWILLWPLHKL 365
Query: 198 AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 256
+ LV++KI++ +G +SGGG+L ID FY AIG+ + GYG++E++PV++ R
Sbjct: 366 GDILVFRKIRAKMGGRINIAISGGGALQKDIDDFYRAIGLNLLEGYGMSETAPVVSFRDY 425
Query: 257 TCNVLGSVGHPINHTEIKIVDAE-----TNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 311
G VG E++IV E + E L G +G++ +R QVM+GY+K P T+
Sbjct: 426 RHPRPGVVGVIFPTMEVRIVAEEHGSIVSMEHLGPGRQGLIVLRSPQVMKGYYKRPDLTE 485
Query: 312 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 371
+ LD GWLNTGD+G + + + + GRAKDTIVL GENVEP+ +E A
Sbjct: 486 KVLDRAGWLNTGDLGMMTLDNE----------IKITGRAKDTIVLLDGENVEPVIIESAL 535
Query: 372 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 418
L S+ I I+V GQD++ GA+IVP K+ ++ A ++ + L
Sbjct: 536 LESNYIESIMVTGQDKKYLGALIVPVKDALIAFASENNLAYTSYENL 582
>gi|398334435|ref|ZP_10519140.1| long-chain-fatty-acid--CoA ligase [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 628
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 153/448 (34%), Positives = 240/448 (53%), Gaps = 25/448 (5%)
Query: 16 HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS--LYDIVPAENGDKFLSML 73
H + I +D+AT VYTSGTTG PKGVML+H+N++ + S L D + D+ ++ L
Sbjct: 165 HKRGSAIREEDLATIVYTSGTTGKPKGVMLSHRNIVFNVDSALLGDDLNVYPTDRSMAYL 224
Query: 74 PPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 133
PPWH+ ER G +T++ L DL +P ++SVP V+E+LY+ I ++
Sbjct: 225 PPWHIAERLVETICVRAGGAEAFTSISTLSQDLSDIKPTLLLSVPRVWESLYNKIHDKVR 284
Query: 134 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
+S ++ + A I+ Y +K I L + + S +L + I +LW
Sbjct: 285 GASPVQQALFGAFKEIAITY--YKHISRLQGLEYSLTEESTFASLWQKFISLWIVILLWI 342
Query: 194 LHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
+ +A+ L + KI+ +G + +SG G+LP +ID F+ AIG+ + GYG+TE S +
Sbjct: 343 PNQIAQ-LAFNKIKQGLGGELRFALSGAGALPQYIDTFFNAIGIPILEGYGMTELSGIST 401
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
R +G++G I +IK++D + E+ G KGI +G VM+GY+K P TK+
Sbjct: 402 RRILGEITVGTLGRCIPGVQIKLMDEKGKEITKPGVKGIAWHKGDHVMKGYYKEPEKTKE 461
Query: 313 ALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 371
L DGWLN+GD + W G L GRAKDTIVL GEN+EP +E A
Sbjct: 462 ILSSDGWLNSGDLLTWT-----------TSGELKYSGRAKDTIVLLGGENLEPEPIEFAL 510
Query: 372 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL-SIVHADASELSKE-KTISLLYG 429
+RS I Q +V+G DQ+ GA+IVP++E + K L S + ++ L+ + I+L
Sbjct: 511 VRSQFIHQAMVVGHDQKTLGALIVPNEEALEKYLKELRSKMLSEVRNLNGDADVIALFKN 570
Query: 430 ELRKWTS-----KCSFQIGPIHVVDEPF 452
E++ S K ++ ++D+ F
Sbjct: 571 EIKNLVSSENGFKNFEKVSNFRILDKKF 598
>gi|302338016|ref|YP_003803222.1| AMP-dependent synthetase and ligase [Spirochaeta smaragdinae DSM
11293]
gi|301635201|gb|ADK80628.1| AMP-dependent synthetase and ligase [Spirochaeta smaragdinae DSM
11293]
Length = 634
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 149/400 (37%), Positives = 227/400 (56%), Gaps = 26/400 (6%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+D+AT +YTSGTTG PKGVML H++ + Q+ +YD + G LS+LP WH +ERA
Sbjct: 185 NDLATIIYTSGTTGEPKGVMLPHRSFIFQLDRVYDHIQIVPGHILLSVLPVWHSFERAVE 244
Query: 85 YFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y + +RG + Y+ + D+Q+ +P ++ SVP ++E + + I K I ++++
Sbjct: 245 YIMLARGAAIAYSKPIGAVMLPDMQKVKPQWLASVPRIWEGVRAAIFKNISKEGKVKQLL 304
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW---PLHLLAE 199
+ + ++A F + ++K P + V WL + L P LL
Sbjct: 305 FSFFVTVGELHSAM------FNMVTDRK-PDF-VGRHRWLDILLAIIPLILLTPFQLLGS 356
Query: 200 KLVYKKIQSAIGISK-AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
LV+ K+++ +G AG+SGGG+LP ++D F++A G+ + GYGLTE+ PV+A R+
Sbjct: 357 LLVFGKLKARLGGKFIAGISGGGALPPYVDRFFQAAGILLLEGYGLTETGPVLAVRKQKH 416
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
V G+VG + E ++VD E VLP G KG++ V+ QVM GY+K AT+ L DG
Sbjct: 417 PVHGTVGPLLADIEHRVVDRE-GVVLPPGRKGVLYVKSPQVMDGYYKREEATEAVL-HDG 474
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
WLNTGDI R G +L GRAK+TIVL GEN+EP+ +EE S I
Sbjct: 475 WLNTGDITLFT---------RQGEFKIL-GRAKETIVLLGGENIEPVPIEEHLCASDAIA 524
Query: 379 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 418
Q +V+GQD++ A+IVP+ E++ A+ I + A EL
Sbjct: 525 QAMVVGQDKKFLAALIVPEMEKLQQYAQEKGISYIQAEEL 564
>gi|183220510|ref|YP_001838506.1| long-chain acyl-CoA synthetase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189910619|ref|YP_001962174.1| long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167775295|gb|ABZ93596.1| Long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167778932|gb|ABZ97230.1| Long-chain acyl-CoA synthetase, AMP-forming (Acyl-CoA synthetase)
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 639
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 153/445 (34%), Positives = 249/445 (55%), Gaps = 26/445 (5%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ + I D +AT +YTSGTTGNPKGVML+ K + I++ + + D +S+LPPWH
Sbjct: 181 RIKQIDPDALATLIYTSGTTGNPKGVMLSQKGWITAIQNTIVRLDMNSNDNAVSLLPPWH 240
Query: 78 VYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
+ERA Y G++ + + + +LKDDL+ ++P SVP ++E++Y+GI ++
Sbjct: 241 AFERAIEYAGIFLGLDFLISNMTSLKDDLRDFRPTIFPSVPRIWESVYNGIMAKVAKEGG 300
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
+ + +++ + F ++ GF ++P++LV++ +A +I +L PL LL
Sbjct: 301 FKEKLFHFFLKVGATWARFFAMFMGFEF--EIQKPNFLVSICKRTYALVILILLSPLKLL 358
Query: 198 AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 256
+ K ++ I A+G + +S G +LP +D F AIG+KV GYG+TE+S V++ R
Sbjct: 359 SIK-IFSAIHKALGGRIRICISAGSALPSVVDGFLSAIGLKVLEGYGMTETSAVVSIRSN 417
Query: 257 TCNVLGSVGHPINHTEIKIVDAETNEVLPA-GSKGIVKVRGSQVMQGYFKNPSATKQALD 315
T G+VG PI+ I++ D ET +VL G KG + ++ Q+++GY+K P + D
Sbjct: 418 TKPTKGTVGIPIDGYSIRLKD-ETGKVLTKIGEKGTLWIKSKQILKGYYKRPELNQVVFD 476
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
DG+ +TGD+ I+ + LV GR+KDTI L GENVEP+ +E+ L S
Sbjct: 477 ADGFFDTGDLMMISHRNE----------LVFAGRSKDTIALIGGENVEPIPIEDKLLTSP 526
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKW 434
I Q++V+G D++ A+IVP+ E V +K I+ A E + K L E+ K
Sbjct: 527 YIDQVMVVGHDKKTLAALIVPNFEAV--ESKIQGILKEKAIEWNTNPKVRELFRSEISKI 584
Query: 435 TSK----CSFQIGP---IHVVDEPF 452
S+ SF++ P +VV PF
Sbjct: 585 ISRDNGFKSFEMIPANNFYVVPRPF 609
>gi|398343925|ref|ZP_10528628.1| long-chain-fatty-acid--CoA ligase [Leptospira inadai serovar Lyme
str. 10]
Length = 630
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/378 (36%), Positives = 209/378 (55%), Gaps = 15/378 (3%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
D++AT +YTSGTTG PKGVMLT + + + V + D +S+LPPWH +ERA
Sbjct: 180 DELATLIYTSGTTGAPKGVMLTQTGWISAVEKVIGFVGLTSSDSGISLLPPWHAFERAIE 239
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
Y I G E + + + NLK+DL+ ++P SVP ++E+LY+GI ++ S +RV+
Sbjct: 240 YCIVELGAEFLVSNINNLKEDLKEFKPTLFPSVPRIWESLYNGIMNKVAKESPIKRVLFD 299
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
+++ ++ K I G+ + P ++ L+ L A L PL L A L+++
Sbjct: 300 FFLKVGMSWAEKKSILFGYDFRIMRPDP--MLRLLQKLSAFFGLIFLSPLKLGA-ILIFR 356
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
+ A+G + VS G +LP +D F IG+ V GYG+TE+S V++ R+ G+
Sbjct: 357 GVHQALGGRLRVSVSAGSALPSVVDKFLSGIGLIVLEGYGMTETSAVLSIRKANRPSPGT 416
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
VG PI E I D ET + G KG + ++ QV+ GY+K P D++G+ +TG
Sbjct: 417 VGTPIAGYECIIKD-ETGNPVAQGKKGSLWIKSKQVLIGYYKRPELNAVVFDKNGFFDTG 475
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
DI + LV GRAKDTIVL+ GENVEP+ +E+ L S I Q++V
Sbjct: 476 DIMRFNYRNE----------LVFTGRAKDTIVLAGGENVEPVPVEDQLLNSPYINQVMVT 525
Query: 384 GQDQRRPGAIIVPDKEEV 401
G + + A+IVPD E++
Sbjct: 526 GHEAKHLVALIVPDFEKL 543
>gi|374586246|ref|ZP_09659338.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
gi|373875107|gb|EHQ07101.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
Length = 643
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 222/373 (59%), Gaps = 17/373 (4%)
Query: 27 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 86
+AT +YTSGTTG PKGVML+ K + + + + GD+ LS+LPPWH +ER Y
Sbjct: 188 LATLIYTSGTTGAPKGVMLSQKGWITAVLNTLPRTGFQKGDRALSLLPPWHAFERGVEYA 247
Query: 87 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 146
+ G+ M + + L+DDL+ ++P SVP ++E++Y+GI ++ SA ++ V A
Sbjct: 248 VVYLGLAFMVSDISCLRDDLKWHRPTIFPSVPRIWESVYNGILAKVKKESALKQAVFNAG 307
Query: 147 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 206
+ I +Y +K G+ L ++P+ +V++I+ L A + ++ PL L+ L+++ I
Sbjct: 308 LSIGASYNRWKARAFGYRL--QIERPATIVSMIERLAAWCVLLVMGPLRGLS-LLIFRPI 364
Query: 207 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 265
+ A+G K VSGG +LP +D F AIG+ V GYG+TE+S VI+ R G+VG
Sbjct: 365 RQALGGQIKFSVSGGSALPGVVDRFLSAIGLTVLEGYGMTETSAVISIRNRNRPTPGTVG 424
Query: 266 HPINHTEIKIVDAETNEV--LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
PI I++ + + ++V +P G+KG + V+ Q++ GY++ P + D++G+ +TG
Sbjct: 425 TPIGGYTIRLKNEQGHDVSHIP-GAKGTLWVKSDQILTGYYRRPELNEVVFDKEGFFDTG 483
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+ + H G L+ GR+KDTI L+ GEN+EP+ +E+ L S I Q++V+
Sbjct: 484 DL-MLLTHR---------GELMFAGRSKDTIALAGGENIEPVPIEDYLLESEFIDQVMVV 533
Query: 384 GQDQRRPGAIIVP 396
G +++ GA+IVP
Sbjct: 534 GDERKTLGALIVP 546
>gi|332297617|ref|YP_004439539.1| 4-coumarate--CoA ligase [Treponema brennaborense DSM 12168]
gi|332180720|gb|AEE16408.1| Long-chain-fatty-acid--CoA ligase., 4-coumarate--CoA ligase
[Treponema brennaborense DSM 12168]
Length = 653
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 142/391 (36%), Positives = 217/391 (55%), Gaps = 24/391 (6%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP-AENGDKFLSMLPPWHVYERAC 83
D+IAT ++TSGTTG PKGVMLTH N + Q+ + ++ E+GD +LS+LP WH +ER
Sbjct: 196 DEIATIIFTSGTTGVPKGVMLTHDNFIAQVEVVKSVLTNTEDGDLWLSVLPVWHSFERVF 255
Query: 84 GYFIFSRGIELMYT--AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y + L Y+ + D+ +P M VP ++E+L G+ + + +
Sbjct: 256 QYLVMGLNSGLAYSKPVAAVMLADMATLRPQAMCGVPRLWESLAQGVFRTMRKTGGVPYK 315
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
+ I + ++ + G +++ ++D L + +L PL+ L L
Sbjct: 316 LFLFFISVGKKFSWAREHVRGLVCRLHRRS-----RILDALVGILPLILLSPLYALGNLL 370
Query: 202 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
VY+KI++ +G + +SGGG+L D FY AIG K+ GYG+TE++PV++ R P+
Sbjct: 371 VYRKIRAKLGGRMECAISGGGALQSETDAFYRAIGFKLLEGYGITEAAPVLSVRWPSKPR 430
Query: 261 LGSVGHPINHTEIKIVDAE-----TNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
G VG +IK+V E + E LP G G+V RG Q+M+GY+K P T+Q +D
Sbjct: 431 SGCVGQVYPCAQIKVVAEEHGRIVSGEPLPPGKSGLVLARGRQIMKGYYKRPDLTEQVVD 490
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
+DGWLNTGD+G ++ + + + GRAKDTIVL GEN+EPL +E A S
Sbjct: 491 KDGWLNTGDLGVLSYDNE----------IKITGRAKDTIVLLGGENIEPLVIESALCGSP 540
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 406
I V+ GQD++ GA+IVP KE +L A+
Sbjct: 541 YIESAVIQGQDKKYLGALIVPVKEAILTFAQ 571
>gi|359688035|ref|ZP_09258036.1| long-chain-fatty-acid--CoA ligase [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418747832|ref|ZP_13304127.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
gi|418758109|ref|ZP_13314293.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|384114816|gb|EIE01077.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|404276682|gb|EJZ43993.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
Length = 644
Score = 231 bits (588), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 139/391 (35%), Positives = 219/391 (56%), Gaps = 25/391 (6%)
Query: 16 HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR---SLYD--IVPAENGDKFL 70
H + E+I D+AT VYTSGTTG PKGVML+H+N++ + SL D I P D+ +
Sbjct: 182 HSRGESIQESDLATIVYTSGTTGRPKGVMLSHRNIVFNVNMSLSLDDVRITPE---DRTM 238
Query: 71 SMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQK 130
+ LPPWH+ ER G +T++ +L DLQ +P +++SVP V+E+ Y+ +Q
Sbjct: 239 AYLPPWHIAERLIETACVRAGASEAFTSISSLGQDLQDIKPTFLLSVPRVWESFYNKVQD 298
Query: 131 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 190
++ +S + + ++ + +Y +K G L + K S+ + + +
Sbjct: 299 KLKDASPVAKFIFKSFQSAANSYYKYKSRLLG--LEFSLKPRSFFGEFFHRM-SGLFGTF 355
Query: 191 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
W + + +L++ KI+ ++G K +SG G+LP +ID F+ +IG+ + GYG+TE+S
Sbjct: 356 FWFVPNILAQLLFSKIRKSLGGRLKFAISGAGALPEYIDRFFNSIGIPILEGYGMTETSG 415
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
RR +G++G I EIKI+D + E+ G KGI +G +MQGY+ +P
Sbjct: 416 ASTRRRLDRITVGTLGKCIPGVEIKILDEKGEEIHEPGVKGIAWHKGGHIMQGYYLDPEK 475
Query: 310 TKQALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 368
T + + +DGWLN+GD + W A G L GRAKDTIVL GEN+EP +E
Sbjct: 476 TAETM-KDGWLNSGDLLLWTAQ-----------GELKYAGRAKDTIVLLGGENLEPEPIE 523
Query: 369 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
A +S LI Q +++G DQ+ A++VPD E
Sbjct: 524 FALTQSELILQAMIVGHDQKTLSALLVPDWE 554
>gi|224534428|ref|ZP_03675006.1| long-chain-fatty-acid CoA ligase [Borrelia spielmanii A14S]
gi|224514530|gb|EEF84846.1| long-chain-fatty-acid CoA ligase [Borrelia spielmanii A14S]
Length = 630
Score = 230 bits (587), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 225/383 (58%), Gaps = 18/383 (4%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+ S+D+AT +YTSGTTG+PKGVML+H NLL+Q+ S +V + G F+ +LP WH ++R
Sbjct: 173 VDSNDMATIIYTSGTTGHPKGVMLSHANLLYQVSSFSLMVDTQVGQIFMCILPIWHSFQR 232
Query: 82 ACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
+ Y IF +G+ +++ + R + +D++ PHY+ +VP ++ + I K++
Sbjct: 233 SFSYNIFLKGMVCLFSTIVPRAMLNDIKNINPHYIAAVPRLWIAIRQNIYKEVSKKPFIF 292
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
R++ ++++F R+ G N + + I + +IC L+P L
Sbjct: 293 RIIFHFFVKLAFLSDICYRVVMGL-YPDNGFSLFFPIKKILGTFG-LIC--LFPFKALGN 348
Query: 200 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
L++ KI +G + G++GGGS+ + + F+ +IG+++ YGLTE+SP +A+ +
Sbjct: 349 ILIFNKINKILGNNFVVGITGGGSMSLSVVRFFNSIGIELANAYGLTETSPGVASNKHKK 408
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
++G+ G + T +I DA+ N++ G KGI+ V+G QVM GY+ + AT + + DG
Sbjct: 409 VIIGTCGKILPGTVAEIRDADGNKLEKPG-KGILFVKGPQVMLGYYNDREATCRIIGSDG 467
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
+LNTGDI ++ + V+ + GR KDTIVL+ GENVEP +E S LI
Sbjct: 468 FLNTGDIAKLSKDN----------VVQIIGREKDTIVLNNGENVEPGPIEIKLEESILIE 517
Query: 379 QIVVIGQDQRRPGAIIVPDKEEV 401
+ VV+GQDQ+ GA+I+P+ EE+
Sbjct: 518 KAVVVGQDQKFLGALILPNFEEI 540
>gi|398348947|ref|ZP_10533650.1| long-chain-fatty-acid--CoA ligase [Leptospira broomii str. 5399]
Length = 630
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 136/378 (35%), Positives = 208/378 (55%), Gaps = 15/378 (3%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
D++AT +YTSGTTG PKGVMLT + + + V + D +S+LPPWH +ERA
Sbjct: 180 DELATLIYTSGTTGAPKGVMLTQTGWISAVEKVIGFVGLTSSDSGISLLPPWHAFERAIE 239
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
Y I G + + + NLK+DL+ ++P SVP ++E+LY+GI ++ S+ +R +
Sbjct: 240 YCIIELGAAFLVSNINNLKEDLKEFKPTLFPSVPRIWESLYNGIMNKVARESSFKRALFD 299
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
+++ ++ K I G+ +P+ +V L+ L A L PL L A L+++
Sbjct: 300 FFLKVGMSWAEKKSILFGYDF--RIMKPNSMVRLMQKLGAFFGLVSLLPLKLGA-ILIFR 356
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
+ A+G + VS G +LP +D F IG+ V GYG+TE+S V++ R+ G+
Sbjct: 357 GVHQALGGRLRVSVSAGSALPSVVDKFLSGIGLIVLEGYGMTETSAVLSIRKANRPSPGT 416
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
VG PI E I D N V G KG + ++ QV+ GY+K P D++G+ +TG
Sbjct: 417 VGTPIAGYECIIKDEAGNPV-AQGKKGSLWIKSKQVLIGYYKRPELNAVVFDKNGFFDTG 475
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
DI + LV GRAKDTIVL+ GENVEP+ +E+ L S I Q++V
Sbjct: 476 DIMRFNYRNE----------LVFTGRAKDTIVLAGGENVEPVPVEDQLLNSPYINQVMVT 525
Query: 384 GQDQRRPGAIIVPDKEEV 401
G + + A+IVPD E++
Sbjct: 526 GHEAKHLVALIVPDFEKL 543
>gi|398341584|ref|ZP_10526287.1| long-chain-fatty-acid--CoA ligase [Leptospira inadai serovar Lyme
str. 10]
Length = 644
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 141/388 (36%), Positives = 215/388 (55%), Gaps = 19/388 (4%)
Query: 16 HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR-SL-YDIVPAENGDKFLSML 73
H + E++ D++AT VYTSGTTG PKGVML+HKN+L + SL D + D+ ++ L
Sbjct: 182 HKRGESVSEDELATIVYTSGTTGRPKGVMLSHKNILFNVDMSLSIDDIQFNADDRTMAYL 241
Query: 74 PPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 133
PPWH+ ER G +T++ +L DLQ +P +++SVP V+E+ Y+ I +
Sbjct: 242 PPWHIAERLIETGCIRIGASEAFTSISSLAQDLQEIRPTFLLSVPRVWESFYNKIHDKSR 301
Query: 134 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
+S R + + +F + +K +G L ++ S A ++ A L+P
Sbjct: 302 EASPLARFLFKIFQGAAFTFHKYKSRLQG--LEYMLERISIFREFARRAVALLVVAFLFP 359
Query: 194 LHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
+LLA + +I++ +G K +SG G+LP +ID F+ +IG+ + GYG+TE V
Sbjct: 360 ANLLA-MAAFSRIRNGLGGRLKFALSGAGALPEYIDRFFNSIGIPILEGYGMTELGGVST 418
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
RR +G++G I EIK++D E+ G KGI +G VM GY+K+P T +
Sbjct: 419 RRRLNSITVGTLGRCIPGVEIKLIDERGKEIHEPGVKGIAWHKGPHVMMGYYKDPEKTAE 478
Query: 313 ALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 371
+ DGWLN+GD + W G L GRAKDTIVLS GEN+EP +E A
Sbjct: 479 II-VDGWLNSGDLLLWT-----------VQGELKYAGRAKDTIVLSGGENLEPEPIEFAL 526
Query: 372 LRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
+S LI Q +++G D++ A++VPD E
Sbjct: 527 TQSELILQAMIVGHDKKALSALLVPDWE 554
>gi|359689012|ref|ZP_09259013.1| long-chain-fatty-acid--CoA ligase [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418748800|ref|ZP_13305092.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
gi|418756178|ref|ZP_13312366.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|384115849|gb|EIE02106.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|404275869|gb|EJZ43183.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
Length = 630
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 139/381 (36%), Positives = 212/381 (55%), Gaps = 21/381 (5%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+++AT +YTSGTTG PKGVMLT + + + V + D +S+LPPWH +ERA
Sbjct: 180 NELATLIYTSGTTGAPKGVMLTQTGWISAVEKVIGFVQLTSADSGVSLLPPWHAFERAIE 239
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
Y I G + + + NLK+DL+ +QP SVP ++E+LY+GI ++ S+ +R V
Sbjct: 240 YCILELGAGFLVSNISNLKEDLKEFQPTLFPSVPRIWESLYNGIMNKVSKESSLKRAVFN 299
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW---ARIICAILWPLHLLAEKL 201
++I + K + G+ K+P+++V W + + ++ L L L
Sbjct: 300 FCLKIGNLWAVQKGVLFGYDF--RIKKPNFIV----WTFSKLSSLVLLTLLSPLKLLALL 353
Query: 202 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
V+K I SA+G + VS G +LP +D F +IG+ V GYG+TE+S V++ R+P
Sbjct: 354 VFKPIHSALGGKLRVSVSAGSALPSVVDKFLSSIGLIVLEGYGMTETSAVLSIRKPKQPS 413
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
G+VG PI E + D N ++P G KG + V+ QV+ GY+K P D++G+
Sbjct: 414 PGTVGTPIQGYECILKDEHGN-IVPQGGKGSLWVKSKQVLMGYYKRPELNDVVFDKNGFF 472
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
+TGDI R R G LV GRAKDTIVL+ GENVEP+ +E+ L S + Q+
Sbjct: 473 DTGDI-------MRFNYR---GELVFAGRAKDTIVLAGGENVEPVPIEDQLLNSPYVNQV 522
Query: 381 VVIGQDQRRPGAIIVPDKEEV 401
+V G + + +IVPD E +
Sbjct: 523 MVTGHEAKHLVVLIVPDFERL 543
>gi|456983873|gb|EMG20065.1| AMP-binding enzyme domain protein [Leptospira interrogans serovar
Copenhageni str. LT2050]
Length = 485
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 232/465 (49%), Gaps = 68/465 (14%)
Query: 47 HKNLLHQIRSLYDIVPAE--NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKD 104
H N++HQ+ + ++ E D LS+LP WH++ER Y S GI+ YT V +L++
Sbjct: 2 HSNMIHQMVYVVPMLLTEIKPTDSMLSILPIWHIFERINEYGAISSGIQTYYTKVADLRN 61
Query: 105 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA---RRVVARALIRISFAYTAFKRIYE 161
DL + +P +M P V+E++Y+ I ++ RRV+ + S Y A +R
Sbjct: 62 DLAKAKPSFMAFAPRVWESVYANIYNKVNDPKQTPPIRRVLFKLAYFFSKHYNASRRFLN 121
Query: 162 GFCLTRNQKQ----------------------------------PSYLVALIDWLWARII 187
G + + P Y + L +WL+ ++
Sbjct: 122 GLEVDYENRNIMKSLVIGIRSLIVLLLTGPFTLSAISILAYLTLPVYGIHLPNWLFFSLV 181
Query: 188 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 246
L + +V KI++A G KA +SGGG+L H+D F+ IG+ V GYG+TE
Sbjct: 182 GLGLVFNAKTLDTIVLSKIRAATGGRLKASLSGGGALQSHVDNFFNDIGMLVLEGYGMTE 241
Query: 247 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVR 295
+SPVI+ R ++GSVG + +E+ I D N EVL G KGIV V+
Sbjct: 242 TSPVISVRPFVKPIIGSVGFLVPKSELIIKDENGNVLTHINDQYEVLAGKLGQKGIVFVK 301
Query: 296 GSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIV 355
G QVM+GY+KNP TK+ + DGW+NTGDIG+I L L GRAKDT+V
Sbjct: 302 GPQVMKGYYKNPEVTKKTI-VDGWMNTGDIGFI----------NFKKTLTLTGRAKDTVV 350
Query: 356 LSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADA 415
L GENVEP+ +E S I+Q +VIGQDQ+ GAIIVPD E + + K I +
Sbjct: 351 LLGGENVEPVPIENKMDESPFIKQSMVIGQDQKVLGAIIVPDMEHLGVWCKENGIDSSKI 410
Query: 416 SELSKE-KTISLLYGELRKWTS-KCSF----QIGPIHVVDEPFTV 454
E+ K K I E+R + S K F Q+ + + +PF V
Sbjct: 411 DEIIKNPKVIDFYKKEVRSYNSTKTGFKSFEQVQHVILAKKPFEV 455
>gi|374585933|ref|ZP_09659025.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
gi|373874794|gb|EHQ06788.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
Length = 638
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 152/458 (33%), Positives = 236/458 (51%), Gaps = 43/458 (9%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI-----VPAENGDKFLSMLP 74
E + DD+AT +YTSGTTG PKGVMLTH ++L ++ +L+ V GD + LP
Sbjct: 175 EAVKPDDLATIIYTSGTTGVPKGVMLTHGSMLWEVATLHKEFVKTGVTVGRGDITMGFLP 234
Query: 75 PWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 134
PWH ER F G + +T V L DL+ +P ++ +VP V+E Y I Q+
Sbjct: 235 PWHSGERMFETICFYSGAAVAFTTVAELARDLKAIRPTFLFTVPRVWENFYGKILDQLKG 294
Query: 135 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY--LVALIDWLWARIICAILW 192
S+A R + + ++ + ++ R L R + + L L+ A +I L
Sbjct: 295 SAAFSRFLFQLFVKTACSF----RAALDTVLDRQVRLTASRSLSELVKIPVAALIVLALL 350
Query: 193 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
P+ L+A +L +KI + +G + +G G+L +D F+ +IG+ + YG+TE+S V
Sbjct: 351 PVALIA-RLFLRKILAVLGGRVRFAFAGAGALQPEVDRFFHSIGLPLLEVYGMTENSGVS 409
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 311
R V G+VG P+ EI++V+ + G KG+ RG M+GY++ P T
Sbjct: 410 TIRHLNRFVTGTVGRPLTGVEIRLVNDRKETITEPGIKGVALHRGPHNMKGYYREPEKTA 469
Query: 312 QALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA 370
+D +GWLN+GD + W A G L GRAKDTIVLS GENVEP +E +
Sbjct: 470 AIIDAEGWLNSGDLLMWTAQ-----------GDLKFAGRAKDTIVLSGGENVEPEPIENS 518
Query: 371 ALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL--------MAAKRLSIVHADASELSKEK 422
+S +VV+GQD++ GA+IVP +E++L +RL + E++K
Sbjct: 519 LKQSEYFTHVVVVGQDRKTLGALIVPKREKLLPLLNGSAPSDPERLEEALNQSEEIAK-- 576
Query: 423 TISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTVN 455
L+ E++K+ S K ++ H++ FTVN
Sbjct: 577 ---LVREEIKKYVSQETGYKAFERVTTFHILGGDFTVN 611
>gi|417782916|ref|ZP_12430639.1| AMP-binding enzyme [Leptospira interrogans str. C10069]
gi|418733600|ref|ZP_13290724.1| AMP-binding enzyme [Leptospira interrogans str. UI 12758]
gi|409953617|gb|EKO08113.1| AMP-binding enzyme [Leptospira interrogans str. C10069]
gi|410773209|gb|EKR53240.1| AMP-binding enzyme [Leptospira interrogans str. UI 12758]
Length = 624
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 136/440 (30%), Positives = 229/440 (52%), Gaps = 20/440 (4%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E++G D+AT +YTSGTTG PKGVML H++ I + + +P D+ + LPPWH+
Sbjct: 164 ESLGGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFIPGSYNDRTILFLPPWHIA 223
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ER + + G + +++ + D+Q+ +P ++SVP ++E LY I + SS +
Sbjct: 224 ERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIYDTVRKSSPFK 283
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + ++++ T+ + T + P+ L+D A + L P+ +L+
Sbjct: 284 QKLFHFAVKMAEITTSLQDTIRDSYATTETENPNQ--KLLDRFIASVFLLSLVPIKILSN 341
Query: 200 KLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
K++ + G + + G G++P HI F+ + G+ + YG+TE++ + A
Sbjct: 342 KILERVRNLFGGKIRFALCGAGAMPSHIQFFFRSAGIHIIETYGMTETTGIGAIGEFPIP 401
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
G++G P+ T IK+V V G KG+ +G V GY+K P T +AL +DGW
Sbjct: 402 KNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDGW 460
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
L++GDI + H+ G L GRAKDTIVLS GEN+EP +E S I Q
Sbjct: 461 LDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQ 510
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGEL--RKWTS 436
++V+GQDQ+ G +IVP + V + ++ + D +E S K I+ + + K ++
Sbjct: 511 VIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPTEWSSSKEITTFFKNIVKDKIST 570
Query: 437 KCSF----QIGPIHVVDEPF 452
K F +I IH++ + F
Sbjct: 571 KAGFKSFEKIAHIHILSKEF 590
>gi|398335017|ref|ZP_10519722.1| long-chain-fatty-acid--CoA ligase [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 631
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 132/375 (35%), Positives = 209/375 (55%), Gaps = 15/375 (4%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
D++AT +YTSGTTG PKGVML + + + V + D +S+LPPWH +ERA
Sbjct: 180 DELATLIYTSGTTGAPKGVMLNQSGWISAVEKVIRFVGLTSKDSGVSLLPPWHAFERAIE 239
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
Y + G+ + + + +L+DDL+ ++P SVP ++E+LY+GI ++ SA +R +
Sbjct: 240 YCTVALGVTFLISNITSLRDDLKEFRPTLFPSVPRIWESLYNGIMTKVSKESALKRNLFH 299
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
+++ ++ K I G+ ++P +L L A I +L+PL L A +++
Sbjct: 300 FFLKVGMIWSHNKSILFGYDF--QLEKPFFLSQLFKRTIALIKLVLLFPLKLGAIG-IFQ 356
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
+ A+G + VS G +LP +D F AIG+ V GYG+TE+S V + R P G+
Sbjct: 357 SVHKALGGRLRVSVSAGSALPSVVDKFLSAIGLIVLEGYGMTETSAVTSIRDPHRPSSGT 416
Query: 264 VGHPINHTEIKIVDAETNEVLPAGS-KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
VG P++ E ++ D VL S KG + ++ Q++ GY+K P + D++G+ +T
Sbjct: 417 VGIPVDGYEYRLKDERGGFVLNGHSQKGTLWLKSKQILMGYYKRPELNEVVFDKEGFFDT 476
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GDI I + RG L GRAKDTIVL+ GENVEP+ +E+ L S I Q++V
Sbjct: 477 GDIMRI---NYRGE-------LSFAGRAKDTIVLAGGENVEPVPIEDQLLNSPYINQVMV 526
Query: 383 IGQDQRRPGAIIVPD 397
G + + +IVPD
Sbjct: 527 TGHESKHLVVLIVPD 541
>gi|417760957|ref|ZP_12408971.1| AMP-binding enzyme [Leptospira interrogans str. 2002000624]
gi|417773540|ref|ZP_12421417.1| AMP-binding enzyme [Leptospira interrogans str. 2002000621]
gi|418667876|ref|ZP_13229281.1| AMP-binding enzyme [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|409942951|gb|EKN88554.1| AMP-binding enzyme [Leptospira interrogans str. 2002000624]
gi|410576628|gb|EKQ39633.1| AMP-binding enzyme [Leptospira interrogans str. 2002000621]
gi|410756321|gb|EKR17946.1| AMP-binding enzyme [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|455790425|gb|EMF42291.1| AMP-binding enzyme [Leptospira interrogans serovar Lora str. TE
1992]
Length = 624
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 135/440 (30%), Positives = 229/440 (52%), Gaps = 20/440 (4%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E++G D+AT +YTSGTTG PKGVML H++ I + + +P D+ + LPPWH+
Sbjct: 164 ESLGGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFIPGSYNDRTILFLPPWHIA 223
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ER + + G + +++ + D+Q+ +P ++SVP ++E LY I + SS +
Sbjct: 224 ERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIYDTVRKSSPFK 283
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + ++++ T+ + T + P+ L+D A + L P+ +L+
Sbjct: 284 QKLFHFAVKMAEITTSLQDTIRDSYATTETENPNQ--KLLDRFIASVFLLSLVPIKILSN 341
Query: 200 KLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
K++ + G + + G G++P HI F+ + G+ + YG+TE++ + A
Sbjct: 342 KILERVRNLFGGKIRFALCGAGAMPSHIQFFFRSAGIHIIETYGMTETTGIGAIGEFPIP 401
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
G++G P+ T IK+V V G KG+ +G V GY+K P T +AL +DGW
Sbjct: 402 KNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDGW 460
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
L++GDI + H+ G L GRAKDTIVLS GEN+EP +E S I Q
Sbjct: 461 LDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQ 510
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGEL--RKWTS 436
++V+GQDQ+ G +IVP + V + ++ + D +E S K I+ + + K ++
Sbjct: 511 VIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPTEWSSSKEITTFFKNIVKDKIST 570
Query: 437 KCSF----QIGPIHVVDEPF 452
K F +I +H++ + F
Sbjct: 571 KAGFKSFEKIAHVHILSKEF 590
>gi|417763927|ref|ZP_12411900.1| AMP-binding enzyme [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|400353759|gb|EJP05912.1| AMP-binding enzyme [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|456821587|gb|EMF70093.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
LT1962]
Length = 624
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 135/440 (30%), Positives = 229/440 (52%), Gaps = 20/440 (4%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E++G D+AT +YTSGTTG PKGVML H++ I + + +P D+ + LPPWH+
Sbjct: 164 ESLGGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFIPGSYNDRTILFLPPWHIA 223
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ER + + G + +++ + D+Q+ +P ++SVP ++E LY I + SS +
Sbjct: 224 ERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIYDTVRKSSPFK 283
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + ++++ T+ + T + P+ L+D A + L P+ +L+
Sbjct: 284 QKLFHFAVKMAEITTSLQDTIRDSYATTETENPNQ--KLLDRFIASVFLLSLVPIKILSN 341
Query: 200 KLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
K++ + G + + G G++P HI F+ + G+ + YG+TE++ + A
Sbjct: 342 KILERVRNLFGGKIRFALCGAGAMPSHIQFFFRSAGIHIIETYGMTETTGIGAIGEFPIP 401
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
G++G P+ T IK+V V G KG+ +G V GY+K P T +AL +DGW
Sbjct: 402 KNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDGW 460
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
L++GDI + H+ G L GRAKDTIVLS GEN+EP +E S I Q
Sbjct: 461 LDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQ 510
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGEL--RKWTS 436
++V+GQDQ+ G +IVP + V + ++ + D +E S K ++ + + K ++
Sbjct: 511 VIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPTEWSSSKEVTTFFKNIVKDKIST 570
Query: 437 KCSF----QIGPIHVVDEPF 452
K F +I IH++ + F
Sbjct: 571 KAGFKSFEKIAHIHILSKEF 590
>gi|421121176|ref|ZP_15581475.1| AMP-binding enzyme [Leptospira interrogans str. Brem 329]
gi|410346004|gb|EKO97048.1| AMP-binding enzyme [Leptospira interrogans str. Brem 329]
Length = 624
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 135/440 (30%), Positives = 229/440 (52%), Gaps = 20/440 (4%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E++G D+AT +YTSGTTG PKGVML H++ I + + +P D+ + LPPWH+
Sbjct: 164 ESLGGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFIPGSYNDRTILFLPPWHIA 223
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ER + + G + +++ + D+Q+ +P ++SVP ++E LY I + SS +
Sbjct: 224 ERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIYDTVRKSSPFK 283
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + ++++ T+ + T + P+ L+D A + L P+ +L+
Sbjct: 284 QKLFHFAVKMAEITTSLQDTIRDSYATTETENPNQ--KLLDRFIASVFLLSLVPIKILSN 341
Query: 200 KLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
K++ + G + + G G++P HI F+ + G+ + YG+TE++ + A
Sbjct: 342 KILERVRNLFGGKIRFALCGAGAMPSHIQFFFRSAGIHIIETYGMTETTGIGAIGEFPIP 401
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
G++G P+ T IK+V V G KG+ +G V GY+K P T +AL +DGW
Sbjct: 402 KNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDGW 460
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
L++GDI + H+ G L GRAKDTIVLS GEN+EP +E S I Q
Sbjct: 461 LDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQ 510
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGEL--RKWTS 436
++V+GQDQ+ G +IVP + V + ++ + D +E S K I+ + + K ++
Sbjct: 511 VIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPTEWSSSKEITTFFKNIVKDKIST 570
Query: 437 KCSF----QIGPIHVVDEPF 452
K F +I +H++ + F
Sbjct: 571 KAGFKSFEKIAHVHILSKEF 590
>gi|418672585|ref|ZP_13233921.1| AMP-binding enzyme [Leptospira interrogans str. 2002000623]
gi|410580273|gb|EKQ48098.1| AMP-binding enzyme [Leptospira interrogans str. 2002000623]
Length = 645
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 135/440 (30%), Positives = 229/440 (52%), Gaps = 20/440 (4%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E++G D+AT +YTSGTTG PKGVML H++ I + + +P D+ + LPPWH+
Sbjct: 185 ESLGGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFIPGSYNDRTILFLPPWHIA 244
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ER + + G + +++ + D+Q+ +P ++SVP ++E LY I + SS +
Sbjct: 245 ERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIYDTVRKSSPFK 304
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + ++++ T+ + T + P+ L+D A + L P+ +L+
Sbjct: 305 QKLFHFAVKMAEITTSLQDTIRDSYATTETENPNQ--KLLDRFIASVFLLSLVPIKILSN 362
Query: 200 KLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
K++ + G + + G G++P HI F+ + G+ + YG+TE++ + A
Sbjct: 363 KILERVRNLFGGKIRFALCGAGAMPSHIQFFFRSAGIHIIETYGMTETTGIGAIGEFPIP 422
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
G++G P+ T IK+V V G KG+ +G V GY+K P T +AL +DGW
Sbjct: 423 KNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDGW 481
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
L++GDI + H+ G L GRAKDTIVLS GEN+EP +E S I Q
Sbjct: 482 LDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQ 531
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGEL--RKWTS 436
++V+GQDQ+ G +IVP + V + ++ + D +E S K I+ + + K ++
Sbjct: 532 VIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPTEWSSSKEITTFFKNIVKDKIST 591
Query: 437 KCSF----QIGPIHVVDEPF 452
K F +I +H++ + F
Sbjct: 592 KAGFKSFEKIAHVHILSKEF 611
>gi|421123940|ref|ZP_15584210.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421134660|ref|ZP_15594793.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410021244|gb|EKO88036.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410438427|gb|EKP87513.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
Length = 645
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 135/440 (30%), Positives = 229/440 (52%), Gaps = 20/440 (4%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E++G D+AT +YTSGTTG PKGVML H++ I + + +P D+ + LPPWH+
Sbjct: 185 ESLGGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFIPGSYNDRTILFLPPWHIA 244
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ER + + G + +++ + D+Q+ +P ++SVP ++E LY I + SS +
Sbjct: 245 ERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIYDTVRKSSPFK 304
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + ++++ T+ + T + P+ L+D A + L P+ +L+
Sbjct: 305 QKLFHFAVKMAEITTSLQDTIRDSYATTETENPNQ--KLLDRFIASVFLLSLVPIKILSN 362
Query: 200 KLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
K++ + G + + G G++P HI F+ + G+ + YG+TE++ + A
Sbjct: 363 KILERVRNLFGGKIRFALCGAGAMPSHIQFFFRSAGIHIIETYGMTETTGIGAIGEFPIP 422
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
G++G P+ T IK+V V G KG+ +G V GY+K P T +AL +DGW
Sbjct: 423 KNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDGW 481
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
L++GDI + H+ G L GRAKDTIVLS GEN+EP +E S I Q
Sbjct: 482 LDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQ 531
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGEL--RKWTS 436
++V+GQDQ+ G +IVP + V + ++ + D +E S K I+ + + K ++
Sbjct: 532 VIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPTEWSSSKEITTFFKNIVKDKIST 591
Query: 437 KCSF----QIGPIHVVDEPF 452
K F +I +H++ + F
Sbjct: 592 KAGFKSFEKIAHVHILSKEF 611
>gi|418717905|ref|ZP_13277444.1| AMP-binding enzyme [Leptospira interrogans str. UI 08452]
gi|410786778|gb|EKR80516.1| AMP-binding enzyme [Leptospira interrogans str. UI 08452]
Length = 624
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 135/440 (30%), Positives = 229/440 (52%), Gaps = 20/440 (4%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E++G D+AT +YTSGTTG PKGVML H++ I + + +P D+ + LPPWH+
Sbjct: 164 ESLGGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFIPGSYNDRTILFLPPWHIA 223
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ER + + G + +++ + D+Q+ +P ++SVP ++E LY I + SS +
Sbjct: 224 ERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIYDTVRKSSPFK 283
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + ++++ T+ + T + P+ L+D A + L P+ +L+
Sbjct: 284 QKLFHFAVKMAEITTSLQDTIRDSYATTETENPNQ--KLLDRFIASVFLLSLVPIKILSN 341
Query: 200 KLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
K++ + G + + G G++P HI F+ + G+++ YG+TE++ + A
Sbjct: 342 KILERVRNLFGGKIRFALCGAGAMPSHIQFFFRSAGIRIIETYGMTETTGIGAIGEFPIP 401
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
G++G P+ T IK+V V G KG+ +G V GY+K P T +AL +DGW
Sbjct: 402 KNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDGW 460
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
L++GDI + H+ G L GRAKDTIVLS GEN+EP +E S I Q
Sbjct: 461 LDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQ 510
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGEL--RKWTS 436
++V+GQDQ+ G +IVP + V + ++ + D +E S K I + + K ++
Sbjct: 511 VIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPTEWSSSKEIITFFKNIVKDKIST 570
Query: 437 KCSF----QIGPIHVVDEPF 452
K F +I +H++ + F
Sbjct: 571 KAGFKSFEKIAHVHILSKEF 590
>gi|24214877|ref|NP_712358.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. 56601]
gi|386074235|ref|YP_005988552.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. IPAV]
gi|24195898|gb|AAN49376.1|AE011388_7 long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. 56601]
gi|353458024|gb|AER02569.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. IPAV]
Length = 645
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 134/440 (30%), Positives = 229/440 (52%), Gaps = 20/440 (4%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E++G D+AT +YTSGTTG PKGVML H++ I + + +P D+ + LPPWH+
Sbjct: 185 ESLGGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFIPGSYNDRTILFLPPWHIA 244
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ER + + G + +++ + D+Q+ +P ++SVP ++E LY I + SS +
Sbjct: 245 ERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIYDTVRKSSPFK 304
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + ++++ T+ + T + P+ L+D A + L P+ +L+
Sbjct: 305 QKLFHFAVKMAEITTSLQDTIRDSYATTETENPNQ--KLLDRFIASVFLLSLVPIKILSN 362
Query: 200 KLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
K++ + G + + G G++P HI F+ + G+ + YG+TE++ + A
Sbjct: 363 KILERVRNLFGGKIRFALCGAGAMPSHIQFFFRSTGIHIIETYGMTETTGIGAIGEFPIP 422
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
G++G P+ T IK+V V G KG+ +G V GY+K P T +AL +DGW
Sbjct: 423 KNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDGW 481
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
L++GDI + H+ G L GRAKDTIVLS GEN+EP +E S I Q
Sbjct: 482 LDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQ 531
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGEL--RKWTS 436
++V+GQDQ+ G +IVP + V + ++ + D +E S K ++ + + K ++
Sbjct: 532 VIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPTEWSSSKEVTTFFKNIVKDKIST 591
Query: 437 KCSF----QIGPIHVVDEPF 452
K F +I +H++ + F
Sbjct: 592 KAGFKSFEKIAHVHILSKEF 611
>gi|418710926|ref|ZP_13271692.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|418726527|ref|ZP_13285138.1| AMP-binding enzyme [Leptospira interrogans str. UI 12621]
gi|421085633|ref|ZP_15546484.1| AMP-binding enzyme [Leptospira santarosai str. HAI1594]
gi|421102363|ref|ZP_15562967.1| AMP-binding enzyme [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|409960437|gb|EKO24191.1| AMP-binding enzyme [Leptospira interrogans str. UI 12621]
gi|410367477|gb|EKP22861.1| AMP-binding enzyme [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410431198|gb|EKP75558.1| AMP-binding enzyme [Leptospira santarosai str. HAI1594]
gi|410768526|gb|EKR43773.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
Length = 624
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 134/440 (30%), Positives = 229/440 (52%), Gaps = 20/440 (4%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E++G D+AT +YTSGTTG PKGVML H++ I + + +P D+ + LPPWH+
Sbjct: 164 ESLGGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFIPGSYNDRTILFLPPWHIA 223
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ER + + G + +++ + D+Q+ +P ++SVP ++E LY I + SS +
Sbjct: 224 ERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIYDTVRKSSPFK 283
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + ++++ T+ + T + P+ L+D A + L P+ +L+
Sbjct: 284 QKLFHFAVKMAEITTSLQDTIRDSYATTETENPNQ--KLLDRFIASVFLLSLVPIKILSN 341
Query: 200 KLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
K++ + G + + G G++P HI F+ + G+ + YG+TE++ + A
Sbjct: 342 KILERVRNLFGGKIRFALCGAGAMPSHIQFFFRSAGIHIIETYGMTETTGIGAIGEFPIP 401
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
G++G P+ T IK+V V G KG+ +G V GY+K P T +AL +DGW
Sbjct: 402 KNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDGW 460
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
L++GDI + H+ G L GRAKDTIVLS GEN+EP +E S I Q
Sbjct: 461 LDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQ 510
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGEL--RKWTS 436
++V+GQDQ+ G +IVP + V + ++ + D +E S K ++ + + K ++
Sbjct: 511 VIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPTEWSSSKEVTTFFKNIVKDKIST 570
Query: 437 KCSF----QIGPIHVVDEPF 452
K F +I +H++ + F
Sbjct: 571 KAGFKSFEKIAHVHILSKEF 590
>gi|45657613|ref|YP_001699.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45600853|gb|AAS70336.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 645
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 134/440 (30%), Positives = 229/440 (52%), Gaps = 20/440 (4%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E++G D+AT +YTSGTTG PKGVML H++ I + + +P D+ + LPPWH+
Sbjct: 185 ESLGGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFIPGSYNDRTILFLPPWHIA 244
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ER + + G + +++ + D+Q+ +P ++SVP ++E LY I + SS +
Sbjct: 245 ERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIYDTVRKSSPFK 304
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + ++++ T+ + T + P+ L+D A + L P+ +L+
Sbjct: 305 QKLFHFAVKMAEITTSLQDTIRDSYATTETENPNQ--KLLDRFIASVFLLSLVPIKILSN 362
Query: 200 KLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
K++ + G + + G G++P HI F+ + G+ + YG+TE++ + A
Sbjct: 363 KILERVRNLFGGKIRFALCGAGAMPSHIQFFFRSAGIHIIETYGMTETTGIGAIGEFPIP 422
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
G++G P+ T IK+V V G KG+ +G V GY+K P T +AL +DGW
Sbjct: 423 KNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDGW 481
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
L++GDI + H+ G L GRAKDTIVLS GEN+EP +E S I Q
Sbjct: 482 LDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQ 531
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGEL--RKWTS 436
++V+GQDQ+ G +IVP + V + ++ + D +E S K ++ + + K ++
Sbjct: 532 VIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPTEWSSSKEVTTFFKNIVKDKIST 591
Query: 437 KCSF----QIGPIHVVDEPF 452
K F +I +H++ + F
Sbjct: 592 KAGFKSFEKIAHVHILSKEF 611
>gi|398346067|ref|ZP_10530770.1| long-chain-fatty-acid--CoA ligase [Leptospira broomii str. 5399]
Length = 644
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 213/388 (54%), Gaps = 19/388 (4%)
Query: 16 HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR-SL-YDIVPAENGDKFLSML 73
H + E++ D++AT VYTSGTTG PKGVML+HKN+L + SL D + D+ ++ L
Sbjct: 182 HKRGESVSEDELATIVYTSGTTGRPKGVMLSHKNILFNVDMSLSIDDIQFNADDRTMAYL 241
Query: 74 PPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 133
PPWH+ ER G +T++ +L DLQ +P +++SVP V+E+ Y+ I ++
Sbjct: 242 PPWHIAERLIETGCIRIGASEAFTSISSLGQDLQEIRPTFLLSVPRVWESFYNKIHDKLR 301
Query: 134 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
+S R + + + + +K G L ++ S A ++ A L+P
Sbjct: 302 EASPFGRFLFKIFQGTASTFHKYKSRLLG--LEYMLERISIFREFARRAVALLVVAFLFP 359
Query: 194 LHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
+LLA + KI+ +G K +SG G+LP +ID F+ +IG+ + GYG+TE V
Sbjct: 360 ANLLA-MTAFSKIRKGLGGKLKFALSGAGALPEYIDRFFNSIGIPILEGYGMTELGGVST 418
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
RR +G++G I EIK++D + E+ G KGI +G VM GY+K+P T +
Sbjct: 419 RRRLNSITVGTLGRCIPGVEIKLIDEQGKEIHEPGVKGIAWHKGPHVMMGYYKDPEKTAE 478
Query: 313 ALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 371
+ DGWLN+GD + W G L GRAKDTIVL GEN+EP +E A
Sbjct: 479 II-VDGWLNSGDLLLWT-----------VQGELKYAGRAKDTIVLLGGENLEPEPIEFAL 526
Query: 372 LRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
+S LI Q +++G D++ A++VPD E
Sbjct: 527 TQSELILQAMIVGHDKKALSALLVPDWE 554
>gi|418703539|ref|ZP_13264423.1| AMP-binding enzyme [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|421116782|ref|ZP_15577157.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410011592|gb|EKO69708.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410766675|gb|EKR37358.1| AMP-binding enzyme [Leptospira interrogans serovar Hebdomadis str.
R499]
Length = 624
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 135/440 (30%), Positives = 228/440 (51%), Gaps = 20/440 (4%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E++G D+AT +YTSGTTG PKGVML H++ I + + +P D+ + LPPWH+
Sbjct: 164 ESLGGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFIPGSYNDRTILFLPPWHIA 223
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ER + + G + +++ + D+Q+ +P ++SVP ++E LY I + SS +
Sbjct: 224 ERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIYDTVRKSSPFK 283
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + ++++ T+ + T + P+ L+D A + L P+ +L+
Sbjct: 284 QKLFHFAVKMAEITTSLQDTIRDSYATTETENPNQ--KLLDRFIASVFLLSLVPIKILSN 341
Query: 200 KLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
K++ + G + + G G++P HI F+ + G+ + YG+TE++ + A
Sbjct: 342 KILERVRNLFGGKIRFALCGAGAMPSHIQFFFRSAGIHIIETYGMTETTGIGAIGEFPIP 401
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
G++G P+ T IK+V V G KG+ +G V GY+K P T +AL +DGW
Sbjct: 402 KNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDGW 460
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
L++GDI + H+ G L GRAKDTIVLS GEN+EP +E S I Q
Sbjct: 461 LDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQ 510
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGEL--RKWTS 436
++V+GQDQ+ G +IVP + V + ++ + D +E S K I + + K ++
Sbjct: 511 VIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPTEWSSSKEIITFFKNIVKDKIST 570
Query: 437 KCSF----QIGPIHVVDEPF 452
K F +I +H++ + F
Sbjct: 571 KAGFKSFEKIAHVHILSKEF 590
>gi|418692332|ref|ZP_13253410.1| AMP-binding enzyme [Leptospira interrogans str. FPW2026]
gi|400357565|gb|EJP13685.1| AMP-binding enzyme [Leptospira interrogans str. FPW2026]
Length = 624
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/440 (30%), Positives = 228/440 (51%), Gaps = 20/440 (4%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E++G D+AT +YTSGTTG PKGVML H++ I + + +P D+ + LPPWH+
Sbjct: 164 ESLGGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFIPGSYNDRTILFLPPWHIA 223
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ER + + G + +++ + D+Q+ +P ++SVP ++E LY I + SS +
Sbjct: 224 ERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIYDTVRKSSPFK 283
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + ++++ T+ + T + P+ L+D A + L P+ +L+
Sbjct: 284 QKLFHFAVKMAEITTSLQDTIRDSYATTETENPNQ--KLLDRFIASVFLLSLVPIKILSN 341
Query: 200 KLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
K++ + G + + G G +P HI F+ + G+ + YG+TE++ + A
Sbjct: 342 KILERVRNLFGGKIRFALCGAGVMPSHIQFFFRSAGIHIIETYGMTETTGIGAIGEFPIP 401
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
G++G P+ T IK+V V G KG+ +G V GY+K P T +AL +DGW
Sbjct: 402 KNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDGW 460
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
L++GDI + H+ G L GRAKDTIVLS GEN+EP +E S I Q
Sbjct: 461 LDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQ 510
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGEL--RKWTS 436
++V+GQDQ+ G +IVP + V + ++ + D +E S K ++ + + K ++
Sbjct: 511 VIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPTEWSSSKEVTTFFKNIVKDKIST 570
Query: 437 KCSF----QIGPIHVVDEPF 452
K F +I +H++ + F
Sbjct: 571 KAGFKSFEKIAHVHILSKEF 590
>gi|418701054|ref|ZP_13261989.1| AMP-binding enzyme [Leptospira interrogans serovar Bataviae str.
L1111]
gi|410759952|gb|EKR26154.1| AMP-binding enzyme [Leptospira interrogans serovar Bataviae str.
L1111]
Length = 624
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 134/440 (30%), Positives = 229/440 (52%), Gaps = 20/440 (4%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E++G D+AT +YTSGTTG PKGVML H++ I + + +P D+ + LPPWH+
Sbjct: 164 ESLGGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFIPGSYNDRTILFLPPWHIA 223
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ER + + G + +++ + D+Q+ +P ++SVP ++E LY I + SS +
Sbjct: 224 ERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIYDTVRKSSPFK 283
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + ++++ T+ + T + P+ L+D A + L P+ +L+
Sbjct: 284 QKLFHFAVKMAEITTSLQDTIRDSYATTETENPNQ--KLLDRFIASVFLLSLVPIKILSN 341
Query: 200 KLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
K++ + G + + G G++P HI F+ + G+ + YG+TE++ + A
Sbjct: 342 KILERVRNLFGGKIRFALCGAGAMPSHIQFFFRSAGIHIIETYGMTETTGIGAIGEFPIP 401
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
G++G P+ T IK+V V G KG+ +G V GY+K P T +AL +DGW
Sbjct: 402 KNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDGW 460
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
L++GDI + H+ G L GRAKDTIVLS GEN+EP +E S I Q
Sbjct: 461 LDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQ 510
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGEL--RKWTS 436
++V+GQD++ G +IVP + V + ++ + D +E S K I+ + + K ++
Sbjct: 511 VIVVGQDRKNLGVLIVPFFDRVQEEFQNQAVKIPKDPTEWSSSKEITTFFKNIVKDKIST 570
Query: 437 KCSF----QIGPIHVVDEPF 452
K F +I +H++ + F
Sbjct: 571 KAGFKSFEKIAHVHILSKEF 590
>gi|417768534|ref|ZP_12416462.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Pomona]
gi|418681218|ref|ZP_13242451.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|400327039|gb|EJO79295.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|409949507|gb|EKN99483.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Pomona]
gi|455669067|gb|EMF34235.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str. Fox
32256]
Length = 624
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 135/440 (30%), Positives = 228/440 (51%), Gaps = 20/440 (4%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E++G D+AT +YTSGTTG PKGVML H++ I + + +P D+ + LPPWH+
Sbjct: 164 ESLGGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFIPGSYNDRTILFLPPWHIA 223
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ER + + G + +++ + D+Q+ +P ++SVP ++E LY I + SS +
Sbjct: 224 ERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIYDTVRKSSHFK 283
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + ++++ T+ + T + P+ L+D A + L P+ +L+
Sbjct: 284 QKLFHFAVKMAEITTSLQDTIRDSYATTETENPNQ--KLLDRFIASVFLLSLVPIKILSN 341
Query: 200 KLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
K++ + G + + G G++P HI F+ + G+ + YG+TE++ + A
Sbjct: 342 KILERVRNLFGGKIRFALCGAGAMPSHIQFFFRSAGIHIIETYGMTETTGIGAIGEFPIP 401
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
G++G P+ T IK+V V G KG+ +G V GY+K P T +AL +DGW
Sbjct: 402 KNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDGW 460
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
L++GDI + H+ G L GRAKDTIVLS GEN+EP +E S I Q
Sbjct: 461 LDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQ 510
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGEL--RKWTS 436
++V+GQDQ+ G +IVP + V + ++ + D +E S K I + + K ++
Sbjct: 511 VIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPTEWSSSKEIITFFKNIVKDKIST 570
Query: 437 KCSF----QIGPIHVVDEPF 452
K F +I +H++ + F
Sbjct: 571 KAGFKSFEKIAHVHILSKEF 590
>gi|398334162|ref|ZP_10518867.1| long-chain-fatty-acid--CoA ligase [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 645
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 138/443 (31%), Positives = 230/443 (51%), Gaps = 26/443 (5%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
ET+ D+AT +YTSGTTG PKGVML H++ I L + VP D+ + LPPWH+
Sbjct: 185 ETLIGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQLQEFVPGSCNDRTIVFLPPWHIA 244
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ER + + G + ++V + D+Q+ +P ++SVP ++E LY I + + R
Sbjct: 245 ERLLETTLIAWGASMACSSVPTIPADMQKVKPTVLVSVPRLWEGLYKRIHDTVRKAPPLR 304
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + +R++ T + T + P+ V +D A ++ L+P+ +L+
Sbjct: 305 QQLFHFAVRMAAITTGLQDTIRDSYATTETENPNQKV--LDRFVASVLLLSLYPVKILSY 362
Query: 200 KLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
K++ + G + + G G++P HI F+ + G+ + YG+TE++ + A
Sbjct: 363 KILQRVRDLFGGKMRFALCGAGAMPSHIQFFFRSAGIPIIETYGMTETTGIGAIGEFPLP 422
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
G++G P+ T IK+V + V G KG+ +G V GY+K P T +AL +DGW
Sbjct: 423 KNGAIGAPLPGTAIKLVGEDGRIVSLPGEKGVAWHKGPHVTVGYYKEPEKTAKAL-QDGW 481
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
L++GDI + H+ G L GRAKDTIVLS GEN+EP +E S I Q
Sbjct: 482 LDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQ 531
Query: 380 IVVIGQDQRRPGAIIVPD----KEEVLMAAKRLSIVHADASELSKEKTISLLYGEL--RK 433
++V+GQD++ G +IVP +EE K+ + D SE + K +S+ + + K
Sbjct: 532 VIVVGQDRKNLGVLIVPFFDRVQEEFSAQGKK---IPKDPSEWNSSKEVSVFFKNIVKDK 588
Query: 434 WTSKCSF----QIGPIHVVDEPF 452
+++ F +I +H++ + F
Sbjct: 589 ISTRAGFKSFEKIAHVHILPKEF 611
>gi|374586245|ref|ZP_09659337.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
gi|373875106|gb|EHQ07100.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
Length = 630
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 129/369 (34%), Positives = 217/369 (58%), Gaps = 17/369 (4%)
Query: 31 VYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSR 90
+YTSGTTG PKG M T + + + ++ + A GD+ +S+LPPWHV+E+ Y
Sbjct: 185 IYTSGTTGAPKGAMQTQQGWIACVENVIPRLQARKGDRAISLLPPWHVFEQVIEYAFLYL 244
Query: 91 GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRIS 150
G++ M T + LK+DL+ ++P SVP ++E++Y+GI ++ S A++ V + +
Sbjct: 245 GLQFMITDISLLKEDLKEFKPTIFPSVPRIWESVYNGIIGKVKKESTAKQKVFNFFLSVG 304
Query: 151 FAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI 210
+ + + G+ L ++P+ + +L+ L +L L K+++K I+ A+
Sbjct: 305 ATWHRWHAVAFGYDL--QIEKPNAIASLLRRL-LAFFVLLLLSPLKLLSKVIFKGIREAL 361
Query: 211 GIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPIN 269
G + +SGG +LP +D F A+G++V GYG+TE+S VI+AR V G++G P++
Sbjct: 362 GGQMRVSLSGGSALPGVVDRFLSAVGLRVLEGYGMTETSAVISARLIEGPVSGTIGKPLD 421
Query: 270 HTEIKIVDAETNEV--LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGW 327
EI++ + + +V +P G+KG + V+ QVM+GY++ P D+DG+ +TGD+
Sbjct: 422 GYEIRLKNEQGVDVKHIP-GAKGTLWVKSVQVMKGYYRRPELNDIVFDKDGFFDTGDLMM 480
Query: 328 IAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQ 387
+ G LV GRAKDTIVL++GEN+EP+ LE+ L S I Q++V+G D+
Sbjct: 481 LTHR----------GELVFAGRAKDTIVLASGENLEPVPLEDRLLISDYIDQVMVVGDDK 530
Query: 388 RRPGAIIVP 396
+ P A+IVP
Sbjct: 531 KYPAALIVP 539
>gi|392405544|ref|YP_006442156.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
gi|390613498|gb|AFM14650.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
Length = 631
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 134/378 (35%), Positives = 207/378 (54%), Gaps = 17/378 (4%)
Query: 27 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 86
+AT +YTSGTTG PKGVML L+ + ++ D LS+LPPWH +ERA Y
Sbjct: 182 MATIIYTSGTTGAPKGVMLNQTGWLNALGRALEMKVITEKDTALSLLPPWHAFERAVEYG 241
Query: 87 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 146
+ E M + + L+ DL ++P SVP ++E+LY+GI +++ S +R V
Sbjct: 242 VMMAQCEFMISGINTLRQDLGDFKPTSFPSVPRIWESLYNGIMQKLEKESPVKRNVFYFF 301
Query: 147 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 206
+ + A+ + I+ G+ L Q +P + + A LA + V+ I
Sbjct: 302 LDVGAAWAKHEAIFNGYDL---QVKPKPALQQVLDRAASGAVLAALLPLKLASQAVFAPI 358
Query: 207 QSAIG--ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 264
A+G +SK+ SGG +LP +D F AIG+KV GYG+TE+S +I+ R V G+V
Sbjct: 359 HQALGGNVSKSA-SGGSALPQVVDRFLTAIGIKVLEGYGMTETSALISLRDVQKPVSGTV 417
Query: 265 GHPINHTEIKIVDAETNEV-LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
G P +IK+ + EV L G+KG + V +Q++ GY+K P D+DG+ +TG
Sbjct: 418 GRPFPGYKIKLKNDLGAEVPLAPGAKGTLWVHSNQLLLGYYKRPELNAVIFDKDGFFDTG 477
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
DI + G L+ GR+K+TI L+ GEN+EP+ +E+ L S I Q++++
Sbjct: 478 DIMVLT----------AAGDLMFAGRSKETIALAGGENIEPVPIEDKLLASEFIDQVMIV 527
Query: 384 GQDQRRPGAIIVPDKEEV 401
G D++ GAIIVP+ E+V
Sbjct: 528 GDDRKTLGAIIVPNFEKV 545
>gi|374850349|dbj|BAL53340.1| long-chain acyl-CoA synthetase [uncultured Bacteroidetes bacterium]
Length = 611
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 156/445 (35%), Positives = 230/445 (51%), Gaps = 56/445 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E DD+ T +YTSGTTG PKGVMLTH+N+L + + ++ + D FLS LP H Y
Sbjct: 180 ERTRGDDLCTIIYTSGTTGTPKGVMLTHRNILSNVEAARSVIAVDERDVFLSYLPMCHSY 239
Query: 80 ERACGYF--IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
ER G++ S G ++ ++ +L+ +P M SVP ++E + GI Q+ S
Sbjct: 240 ERTTGFYTAFASGGTTAFAESLETVRTNLREVRPTIMTSVPQLFERIRGGIYAQMAQQSP 299
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
RR + + I G R Q++ RI A + + L
Sbjct: 300 LRRSIFEWAVTI------------GLRRLREQEEQ-----------GRISAATAFG-YRL 335
Query: 198 AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 256
AE+ V++KIQ A+G + VSGGG L I F+ AIG+ + GYGLTE+SPV+ R
Sbjct: 336 AERFVFRKIQLAVGGRLRFFVSGGGPLAPEIGRFFWAIGLPILEGYGLTEASPVLTVNRL 395
Query: 257 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 316
N G+VG P+ EI+I D+ G + RG +M+GY++NP T+ A+D
Sbjct: 396 DDNEFGTVGKPLPGVEIRIDDS-----------GEILARGPNIMRGYWQNPEETRAAIDA 444
Query: 317 DGWLNTGDIG-WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
DGWL+TGD+G W S+R G L++ R K+ IV S G+NV P +E A +
Sbjct: 445 DGWLHTGDVGRW---------SQR--GNLMITDRIKNLIVTSGGKNVAPQVVERALKQWE 493
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADA--SELSKE-KTISLLYGELR 432
++ Q+VVIG + A+IVP+ EE L A R + A A SEL + + + + EL
Sbjct: 494 VVAQVVVIGDGRPFCTALIVPN-EEALRAFLRAQGIDASAQLSELCTDLRVLGAVMRELE 552
Query: 433 KWTSKCSF--QIGPIHVVDEPFTVN 455
+ + ++ I +V EPFTV
Sbjct: 553 HYQRDLAKYERVRRIAMVAEPFTVE 577
>gi|397689178|ref|YP_006526432.1| Long-chain acyl-CoA synthetase [Melioribacter roseus P3M]
gi|395810670|gb|AFN73419.1| Long-chain acyl-CoA synthetase [Melioribacter roseus P3M]
Length = 607
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 151/443 (34%), Positives = 223/443 (50%), Gaps = 52/443 (11%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
K E + + + T +YTSGTTG PKGVMLTHKN++ I++ ++I + D FLS LP H
Sbjct: 178 KSELVEENQLCTIIYTSGTTGEPKGVMLTHKNIVSNIKAAHEIFDIDETDTFLSFLPLCH 237
Query: 78 VYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 135
++ER GY+ FS G + Y ++ + ++ +P M +VP ++E +Y+ I++ I +
Sbjct: 238 IFERMAGYYTAFSCGGTIAYAESIEKIASNMLEIRPTIMTAVPRLFERMYTKIKRNIESQ 297
Query: 136 SAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLH 195
S ++ + I Y L R QP I L H
Sbjct: 298 SEKKQKIFNWAIETGKEYQ----------LARKSGQP--------------IPVSLTLKH 333
Query: 196 LLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
LA+KLV K++ G + +SGG +L + +F+EA G+ + GYGLTESSPVIAA
Sbjct: 334 KLADKLVLSKLRERTGGRMRFFISGGAALARELGIFFEAAGILIIEGYGLTESSPVIAAN 393
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
R G+VG P+ E+KI A+ E+L G +MQGY+KN T++ +
Sbjct: 394 RLNDYKFGTVGKPMPGVEVKI--AKDGEIL---------AHGPNIMQGYYKNKKETEETI 442
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
+DGWL+TGDIG G L++ R K S G+ V P +E L S
Sbjct: 443 -KDGWLHTGDIGVFDAE----------GFLIITDRKKHLFKTSQGKYVAPTPIESMFLAS 491
Query: 375 SLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI-SLLYGELRK 433
I Q V+IG + A+IVPD E + A I + D EL K K I LL EL +
Sbjct: 492 KYIEQFVIIGDRRMFITALIVPDFEALKEYADANRIQYKDEKELVKMKQIYELLDKELEQ 551
Query: 434 WTSKCSF--QIGPIHVVDEPFTV 454
+ K S ++ ++D+PFT+
Sbjct: 552 FQKKLSSFEKVRKFTLLDKPFTI 574
>gi|418747259|ref|ZP_13303569.1| AMP-binding enzyme [Leptospira santarosai str. CBC379]
gi|410792053|gb|EKR89998.1| AMP-binding enzyme [Leptospira santarosai str. CBC379]
Length = 645
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 140/444 (31%), Positives = 228/444 (51%), Gaps = 28/444 (6%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E + D+AT +YTSGTTG PKGVML H+N I L + VP D+ + LPPWH+
Sbjct: 185 EVLIGKDLATIIYTSGTTGAPKGVMLNHRNFTWGIHQLQEFVPCSYEDRTIVFLPPWHIA 244
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ER + + G + ++V + D+Q+ +P ++SVP ++E LY I + + R
Sbjct: 245 ERLLETTLIAWGASMACSSVPTIPADMQKVKPTVLVSVPRLWEGLYKRIYDTVRKAPPLR 304
Query: 140 RVVARALIRISFAYTAFK-RIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
+ + A + ++ T+ + I + + T + ID A + L+P+ +L+
Sbjct: 305 QKLFYAAVSMAKITTSLQDTIRDSYTTTETENLGQ---KTIDRFVASVFLIFLYPIKILS 361
Query: 199 EKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
K++ + G + + G G++P HI F+ + G+ + YG+TE++ + A
Sbjct: 362 HKILQRVRDLFGGRIRFALCGAGAMPSHIQFFFRSAGIPIIETYGMTETTGIGAIGEFPL 421
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
G++G P+ T IK+V + V G KG+ +G V GY+K P T Q L +DG
Sbjct: 422 PKNGAIGAPLPGTAIKLVGEDGKIVTTPGQKGVAWHKGPHVTLGYYKEPEKTAQTL-QDG 480
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
WL++GDI + H+ G L GRAKDTIVLS GEN+EP +E S I
Sbjct: 481 WLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFIN 530
Query: 379 QIVVIGQDQRRPGAIIVP--DK--EEVLMAAKRLSIVHADASELSKEKTISLLYGEL--R 432
Q++V+GQD++ G +IVP D+ EE K+ + D ++ + K +S + +
Sbjct: 531 QVIVVGQDKKNLGVLIVPFFDRVYEEFQSQGKK---IPKDPTDWNSSKEVSSFFKNIVKD 587
Query: 433 KWTSKCSF----QIGPIHVVDEPF 452
K ++K F +I IHV+ + F
Sbjct: 588 KISTKAGFKSFEKIAHIHVLSKEF 611
>gi|418688436|ref|ZP_13249592.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|418739761|ref|ZP_13296142.1| AMP-binding enzyme [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|410737293|gb|EKQ82035.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|410752883|gb|EKR09855.1| AMP-binding enzyme [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 645
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/441 (30%), Positives = 228/441 (51%), Gaps = 22/441 (4%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E++ D+AT +YTSGTTG PKGVML H++ I + + VP D+ + LPPWH+
Sbjct: 185 ESLVGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFVPGSYNDRTILFLPPWHIA 244
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ER + + G + +++ + D+Q+ +P ++SVP ++E LY I + S +
Sbjct: 245 ERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIHDTVRKSPLFK 304
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + ++I+ T + T + P+ L+D A + + P+ +L+
Sbjct: 305 QKLFHFAVKIAEITTNLQDTIRDSYATTKMENPNQ--KLLDRFVASVFLISMIPIKILSY 362
Query: 200 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
K++ K+++ G + + G G++P HI F+ + G+ + YG+TE++ + A
Sbjct: 363 KIL-KRVRDLFGGRIRFALCGAGAMPSHIQFFFRSAGIHIIETYGMTETTGIGAIGEFPI 421
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
G++G P+ T IK+V V G KG+ +G V GY+K P T +AL +DG
Sbjct: 422 PKNGAIGAPLPGTAIKLVGENGKIVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDG 480
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
WL++GDI + H+ G L GRAKDTIVLS GEN+EP +E S I
Sbjct: 481 WLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFIN 530
Query: 379 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGEL--RKWT 435
Q++V+GQDQ+ G +IVP + V + ++ + D E + K ++ + + K +
Sbjct: 531 QVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPGEWNSSKEVATFFKNIVKDKIS 590
Query: 436 SKCSF----QIGPIHVVDEPF 452
+K F +I +H++ + F
Sbjct: 591 TKAGFKSFEKIAHVHILSKEF 611
>gi|398339139|ref|ZP_10523842.1| long-chain-fatty-acid--CoA ligase [Leptospira kirschneri serovar
Bim str. 1051]
gi|418676702|ref|ZP_13237980.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|421132459|ref|ZP_15592627.1| AMP-binding enzyme [Leptospira kirschneri str. 2008720114]
gi|400322602|gb|EJO70458.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|410356224|gb|EKP03581.1| AMP-binding enzyme [Leptospira kirschneri str. 2008720114]
Length = 645
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/441 (30%), Positives = 228/441 (51%), Gaps = 22/441 (4%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E++ D+AT +YTSGTTG PKGVML H++ I + + VP D+ + LPPWH+
Sbjct: 185 ESLVGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFVPGSYNDRTILFLPPWHIA 244
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ER + + G + +++ + D+Q+ +P ++SVP ++E LY I + S +
Sbjct: 245 ERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIHDTVRKSPLFK 304
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + ++I+ T + T + P+ L+D A + + P+ +L+
Sbjct: 305 QKLFHFAVKIAEITTNLQDTIRDSYATTKMENPNQ--KLLDRFVASVFLISMIPIKILSY 362
Query: 200 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
K++ K+++ G + + G G++P HI F+ + G+ + YG+TE++ + A
Sbjct: 363 KIL-KRVRDLFGGRIRFALCGAGAMPSHIQFFFRSAGIHIIETYGMTETTGIGAIGEFPI 421
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
G++G P+ T IK+V V G KG+ +G V GY+K P T +AL +DG
Sbjct: 422 PKNGAIGAPLPGTAIKLVGENGKIVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDG 480
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
WL++GDI + H+ G L GRAKDTIVLS GEN+EP +E S I
Sbjct: 481 WLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFIN 530
Query: 379 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGEL--RKWT 435
Q++V+GQDQ+ G +IVP + V + ++ + D E + K ++ + + K +
Sbjct: 531 QVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPGEWNSSKEVATFFKNIVKDKIS 590
Query: 436 SKCSF----QIGPIHVVDEPF 452
+K F +I +H++ + F
Sbjct: 591 TKAGFKSFEKIAHVHILSKEF 611
>gi|418719367|ref|ZP_13278567.1| AMP-binding enzyme [Leptospira borgpetersenii str. UI 09149]
gi|418738800|ref|ZP_13295193.1| AMP-binding enzyme [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
gi|410744520|gb|EKQ93261.1| AMP-binding enzyme [Leptospira borgpetersenii str. UI 09149]
gi|410745498|gb|EKQ98408.1| AMP-binding enzyme [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
Length = 645
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 139/443 (31%), Positives = 224/443 (50%), Gaps = 26/443 (5%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E + D+AT +YTSGTTG PKGVML H++ I L + VP D+ + LPPWH+
Sbjct: 185 EILIGKDLATIIYTSGTTGTPKGVMLNHRSFTWGIHQLQEFVPCSCNDRTIIFLPPWHIA 244
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ER + + G + +++ + D+QR +P ++SVP ++E LY I + + R
Sbjct: 245 ERLLETALIAWGASMACSSIPTIPADMQRVKPTVLVSVPRLWEGLYKRIHDTVRKAPPLR 304
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + +R++ T+ + T + P ID A L+P+ +L+
Sbjct: 305 QKLFHIAVRMAEITTSLQDTIRDSYTTIEIENPRQ--KTIDRFVASAFLLFLYPIKILSY 362
Query: 200 KLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
K++ + G + + G G++P HI F+ + G+ + YG+TE++ + A
Sbjct: 363 KILQRVRDLFGGRIRFALCGAGAMPPHIQFFFRSAGIPIIETYGMTETTGIGAIGEFPLP 422
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
G++G P+ T IK+V + G KGI +G V GY+K P T + L +DGW
Sbjct: 423 KNGAIGAPLPGTAIKLVGEDGKIATAPGEKGIAWHKGPHVTVGYYKEPEKTAKTL-QDGW 481
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
L++GDI + H+ G L GRAKDTIVLS GEN+EP +E S I Q
Sbjct: 482 LDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQ 531
Query: 380 IVVIGQDQRRPGAIIVP--DK--EEVLMAAKRLSIVHADASELSKEKTISLLYGEL--RK 433
++V+GQD++ G +IVP D+ EE K+L D +E + K +S + + K
Sbjct: 532 VIVVGQDKKNLGVLIVPFFDRVYEEFQSQGKKLP---KDPTEWNSSKEVSSFFKNIVKDK 588
Query: 434 WTSKCSF----QIGPIHVVDEPF 452
++K F +I IH++ + F
Sbjct: 589 ISTKAGFKSFEKIAHIHILPKEF 611
>gi|421090896|ref|ZP_15551686.1| AMP-binding enzyme [Leptospira kirschneri str. 200802841]
gi|410000482|gb|EKO51112.1| AMP-binding enzyme [Leptospira kirschneri str. 200802841]
Length = 645
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 133/441 (30%), Positives = 228/441 (51%), Gaps = 22/441 (4%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E++ D+AT +YTSGTTG PKGVML H++ I + + VP D+ + LPPWH+
Sbjct: 185 ESLVGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFVPGSYNDRTILSLPPWHIA 244
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ER + + G + +++ + D+Q+ +P ++SVP ++E LY I + S +
Sbjct: 245 ERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIHDTVRKSPLFK 304
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + ++I+ T + T + P+ L+D A + + P+ +L+
Sbjct: 305 QKLFHFAVKIAEITTNLQDTIRDSYATTKMENPNQ--KLLDRFVASVFLISMIPIKILSY 362
Query: 200 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
K++ K+++ G + + G G++P HI F+ + G+ + YG+TE++ + A
Sbjct: 363 KIL-KRVRDLFGGRIRFALCGAGAMPSHIQFFFRSAGIHIIETYGMTETTGIGAIGEFPI 421
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
G++G P+ T IK+V V G KG+ +G V GY+K P T +AL +DG
Sbjct: 422 PKNGAIGAPLPGTAIKLVGENGKIVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDG 480
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
WL++GDI + H+ G L GRAKDTIVLS GEN+EP +E S I
Sbjct: 481 WLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFIN 530
Query: 379 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGEL--RKWT 435
Q++V+GQDQ+ G +IVP + V + ++ + D E + K ++ + + K +
Sbjct: 531 QVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPGEWNSSKEVATFFKNIVKDKIS 590
Query: 436 SKCSF----QIGPIHVVDEPF 452
+K F +I +H++ + F
Sbjct: 591 TKAGFKSFEKIAHVHILSKEF 611
>gi|410450615|ref|ZP_11304649.1| AMP-binding enzyme [Leptospira sp. Fiocruz LV3954]
gi|418752471|ref|ZP_13308732.1| AMP-binding enzyme [Leptospira santarosai str. MOR084]
gi|422004493|ref|ZP_16351710.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai serovar
Shermani str. LT 821]
gi|409967201|gb|EKO35037.1| AMP-binding enzyme [Leptospira santarosai str. MOR084]
gi|410015493|gb|EKO77591.1| AMP-binding enzyme [Leptospira sp. Fiocruz LV3954]
gi|417256795|gb|EKT86209.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai serovar
Shermani str. LT 821]
gi|456876738|gb|EMF91817.1| AMP-binding enzyme [Leptospira santarosai str. ST188]
Length = 645
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 138/444 (31%), Positives = 228/444 (51%), Gaps = 28/444 (6%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E + D+AT +YTSGTTG PKGVML H++ I L + VP D+ + LPPWH+
Sbjct: 185 EVLIGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQLQEFVPCSYEDRTIVFLPPWHIA 244
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ER + + G + ++V + D+Q+ +P ++SVP ++E LY I + + R
Sbjct: 245 ERLLETTLIAWGASMACSSVPTIPADMQKVKPTVLVSVPRLWEGLYKRIYDTVRKAPPLR 304
Query: 140 RVVARALIRISFAYTAFK-RIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
+ + A + ++ T+ + I + + T + ID A + L+P+ +L+
Sbjct: 305 QKLFYAAVSMAKITTSLQDTIRDSYTTTETENLGQ---KTIDRFVASVFLIFLYPIKILS 361
Query: 199 EKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
K++ + G + + G G++P HI F+ + G+ + YG+TE++ + A
Sbjct: 362 HKILQRVRDLFGGRIRFALCGAGAMPSHIQFFFRSAGIPIIETYGMTETTGIGAIGEFPL 421
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
G++G P+ T IK+V + V G KG+ +G V GY+K P T Q L +DG
Sbjct: 422 PKNGAIGAPLPGTAIKLVGEDGKIVTTPGQKGVAWHKGPHVTLGYYKEPEKTAQTL-QDG 480
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
WL++GDI + H+ G L GRAKDTIVLS GEN+EP +E S I
Sbjct: 481 WLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFIN 530
Query: 379 QIVVIGQDQRRPGAIIVP--DK--EEVLMAAKRLSIVHADASELSKEKTISLLYGEL--R 432
Q++V+GQD++ G +IVP D+ EE K+ + D ++ + K +S + +
Sbjct: 531 QVIVVGQDKKNLGVLIVPFFDRVYEEFQSQGKK---IPKDPTDWNSSKEVSSFFKNIVKD 587
Query: 433 KWTSKCSF----QIGPIHVVDEPF 452
K ++K F +I IH++ + F
Sbjct: 588 KISTKAGFKSFEKIAHIHILSKEF 611
>gi|410940968|ref|ZP_11372767.1| AMP-binding enzyme [Leptospira noguchii str. 2006001870]
gi|410783527|gb|EKR72519.1| AMP-binding enzyme [Leptospira noguchii str. 2006001870]
Length = 645
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 133/443 (30%), Positives = 228/443 (51%), Gaps = 26/443 (5%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E++ D+AT +YTSGTTG PKGVML H++ I + + VP D+ + LPPWH+
Sbjct: 185 ESLVGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFVPGSYNDRTILFLPPWHIA 244
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ER + + G + +++ + D+Q+ +P ++SVP ++E LY I + S +
Sbjct: 245 ERLLETALIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIHDTVRKSPPLK 304
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + ++++ T + T ++P+ L+D A I + P+ +L+
Sbjct: 305 QKLFHFAVKMAEIITNLQDTIRDSYATTETEKPNQ--KLLDRFIAGIFLLSMLPIKILSY 362
Query: 200 KLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
K++ + G + + G G++P HI F+ + G+ + YG+TE++ + A
Sbjct: 363 KILERVRDLFGGRIRFALCGAGAMPSHIQFFFRSAGIHIIETYGMTETTGIGAIGEFPIP 422
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
G++G P+ T IK+V + V G KG+ +G V GY+K P T +AL +DGW
Sbjct: 423 KNGAIGAPLPGTAIKLVGEDGKIVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDGW 481
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
L++GDI + H+ G L GRAKDTIVLS GEN+EP +E S I Q
Sbjct: 482 LDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQ 531
Query: 380 IVVIGQDQRRPGAIIVPD----KEEVLMAAKRLSIVHADASELSKEKTISLLYGEL--RK 433
++V+GQD++ G +IVP +EE + K++ D E + K ++ + + K
Sbjct: 532 VIVVGQDRKNLGVLIVPFFDRVQEEFQIQGKKIP---KDPIEWNSSKEVATFFKNIVKDK 588
Query: 434 WTSKCSF----QIGPIHVVDEPF 452
++K F +I +H++ + F
Sbjct: 589 ISTKAGFKSFEKIAHVHILSKEF 611
>gi|421110232|ref|ZP_15570733.1| AMP-binding enzyme [Leptospira santarosai str. JET]
gi|410804417|gb|EKS10534.1| AMP-binding enzyme [Leptospira santarosai str. JET]
Length = 645
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 137/444 (30%), Positives = 228/444 (51%), Gaps = 28/444 (6%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E + D+AT +YTSGTTG PKGVML H++ I L + VP D+ + LPPWH+
Sbjct: 185 EVLIGKDLATIIYTSGTTGTPKGVMLNHRSFTWGIHQLQEFVPCSYEDRTIVFLPPWHIA 244
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ER + + G + ++V + D+Q+ +P ++SVP ++E LY I + + R
Sbjct: 245 ERLLETTLIAWGASMACSSVPTIPADMQKVKPTVLVSVPRLWEGLYKRIYDTVRKAPPLR 304
Query: 140 RVVARALIRISFAYTAFK-RIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
+ + A + ++ T+ + I + + T + ID A + L+P+ +L+
Sbjct: 305 QKLFYAAVSMAKITTSLQDTIRDSYTTTETENLGQ---KTIDRFVASVFLIFLYPIKILS 361
Query: 199 EKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
K++ + G + + G G++P HI F+ + G+ + YG+TE++ + A
Sbjct: 362 HKILQRVRDLFGGRIRFALCGAGAMPSHIQFFFRSAGIPIIETYGMTETTGIGAIGEFPL 421
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
G++G P+ T IK+V + V G KG+ +G + GY+K P T Q L +DG
Sbjct: 422 PKNGAIGAPLPGTAIKLVGEDGKIVTIPGQKGVAWHKGPHITLGYYKEPEKTAQTL-QDG 480
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
WL++GDI + H+ G L GRAKDTIVLS GEN+EP +E S I
Sbjct: 481 WLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFIN 530
Query: 379 QIVVIGQDQRRPGAIIVP--DK--EEVLMAAKRLSIVHADASELSKEKTISLLYGEL--R 432
Q++V+GQD++ G +IVP D+ EE K+ + D ++ + K +S + +
Sbjct: 531 QVIVVGQDKKNLGVLIVPFFDRVYEEFQSQGKK---IPKDPTDWNSSKEVSSFFKNIVKD 587
Query: 433 KWTSKCSF----QIGPIHVVDEPF 452
K ++K F +I IH++ + F
Sbjct: 588 KISTKAGFKSFEKIAHIHILSKEF 611
>gi|359686030|ref|ZP_09256031.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai str.
2000030832]
Length = 645
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 138/444 (31%), Positives = 228/444 (51%), Gaps = 28/444 (6%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E + D+AT +YTSGTTG PKGVML H++ I L + VP D+ + LPPWH+
Sbjct: 185 EVLIGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQLQEFVPCSYEDRTIVFLPPWHIA 244
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ER + + G + ++V + D+Q+ +P ++SVP ++E LY I + + R
Sbjct: 245 ERLLETTLIAWGASMACSSVPTIPADMQKVKPTVLVSVPRLWEGLYKRIYDTVRKAPPLR 304
Query: 140 RVVARALIRISFAYTAFK-RIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
+ + A + ++ T+ + I + + T + ID A + L+P+ +L+
Sbjct: 305 QKLFYAAVSMAKITTSLQDTIRDSYTTTETENLGQ---KTIDRFVASVFLIFLYPIKILS 361
Query: 199 EKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
K++ + G + + G G++P HI F+ + G+ + YG+TE++ + A
Sbjct: 362 HKILQRVRDLFGGRIRFALCGAGAMPSHIQFFFRSAGIPIIETYGMTETTGIGAIGEFPL 421
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
G++G P+ T IK+V + V G KG+ +G V GY+K P T Q L +DG
Sbjct: 422 PKNGAIGAPLPGTAIKLVGEDGKIVTIPGQKGVAWHKGPHVTLGYYKEPEKTAQTL-QDG 480
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
WL++GDI + H+ G L GRAKDTIVLS GEN+EP +E S I
Sbjct: 481 WLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFIN 530
Query: 379 QIVVIGQDQRRPGAIIVP--DK--EEVLMAAKRLSIVHADASELSKEKTISLLYGEL--R 432
Q++V+GQD++ G +IVP D+ EE K+ + D ++ + K +S + +
Sbjct: 531 QVIVVGQDKKNLGVLIVPFFDRVYEEFQSQGKK---IPKDPTDWNSSKEVSSFFKNIVKD 587
Query: 433 KWTSKCSF----QIGPIHVVDEPF 452
K ++K F +I IH++ + F
Sbjct: 588 KISTKAGFKSFEKIAHIHILSKEF 611
>gi|417780670|ref|ZP_12428431.1| AMP-binding enzyme [Leptospira weilii str. 2006001853]
gi|410779379|gb|EKR63996.1| AMP-binding enzyme [Leptospira weilii str. 2006001853]
Length = 645
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 141/446 (31%), Positives = 230/446 (51%), Gaps = 32/446 (7%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E + D+AT +YTSGTTG PKGVML H++ I L + VP D+ + LPPWH+
Sbjct: 185 EILIGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQLQEFVPCSCNDRTIIFLPPWHIA 244
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ER + + G + +++ + D+Q+ +P ++SVP ++E LY I + + R
Sbjct: 245 ERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIHDTVRKAPPLR 304
Query: 140 RVVARALIRISFAYTAFKR-IYEGFCLT--RNQKQPSYLVALIDWLWARIICAILWPLHL 196
+ + +R++ T+ + I + + T N +Q + ID A L+P+ +
Sbjct: 305 QKLFHVAVRMAELTTSLQDTIRDSYATTEIENPRQKT-----IDRFVASAFLLFLYPIKI 359
Query: 197 LAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 256
L+ K++ K G + + G G++P HI F+ + G+ + YG+TE++ + A
Sbjct: 360 LSYKILQKVRDLFGGRIRFALCGAGAMPPHIQFFFRSAGIPIIETYGMTETTGIGAIGEF 419
Query: 257 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 316
++G P+ T IK+V + V G KGI +G V GY+K P T +AL +
Sbjct: 420 PLPKNDAIGAPLPGTAIKLVGEDGKIVTAPGEKGIAWHKGPHVTVGYYKEPEKTAKAL-Q 478
Query: 317 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 376
DGWL++GDI + H+ G L GRAKDTIVLS GEN+EP +E S
Sbjct: 479 DGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEF 528
Query: 377 IRQIVVIGQDQRRPGAIIVP--DK--EEVLMAAKRLSIVHADASELSKEKTISLLYGEL- 431
I Q++V+GQD++ G +IVP D+ EE K+L D +E + K +S + +
Sbjct: 529 INQVIVVGQDKKNLGVLIVPFFDRVYEEFQSQGKKLP---KDPTEWNSSKEVSSFFKNIV 585
Query: 432 -RKWTSKCSF----QIGPIHVVDEPF 452
K ++K F +I I+++ + F
Sbjct: 586 KDKISTKAGFKTFEKIAHIYILPKEF 611
>gi|421094230|ref|ZP_15554950.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200801926]
gi|410362956|gb|EKP13989.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200801926]
gi|456887901|gb|EMF98914.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200701203]
Length = 645
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 138/443 (31%), Positives = 224/443 (50%), Gaps = 26/443 (5%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E + D+AT +YTSGTTG PKGVML H++ I L + VP D+ + LPPWH+
Sbjct: 185 EILIGKDLATIIYTSGTTGTPKGVMLNHRSFTWGIHQLQEFVPCSCNDRTIIFLPPWHIA 244
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ER + + G + +++ + D+QR +P ++SVP ++E LY I + + R
Sbjct: 245 ERLLETALIAWGASMACSSIPTIPADMQRVKPTVLVSVPRLWEGLYKRIHDTVRKAPPLR 304
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + +R++ T+ + T + P ID A L+P+ +L+
Sbjct: 305 QKLFHIAVRMAEITTSLQDTIRDSYTTIEIENPRQ--KTIDRFVASAFLLFLYPIKILSY 362
Query: 200 KLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
K++ + G + + G G++P HI F+ + G+ + YG+TE++ + A
Sbjct: 363 KILQRVRDLFGGRIRFALCGAGAMPPHIQFFFRSAGIPIIETYGMTETTGIGAIGEFPLP 422
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
G++G P+ T IK+V + G KGI +G V GY+K P T + L +DGW
Sbjct: 423 KNGAIGAPLPGTAIKLVGEDGKIATAPGEKGIAWHKGPHVTVGYYKEPEKTAKTL-QDGW 481
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
L++GDI + H+ G L GRAKDTIVLS GEN+EP +E S I Q
Sbjct: 482 LDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQ 531
Query: 380 IVVIGQDQRRPGAIIVP--DK--EEVLMAAKRLSIVHADASELSKEKTISLLYGEL--RK 433
++V+GQD++ G +IVP D+ EE K+L D +E + K ++ + + K
Sbjct: 532 VIVVGQDKKNLGVLIVPFFDRVYEEFQSQGKKLP---KDPTEWNSSKEVNSFFKNIVKDK 588
Query: 434 WTSKCSF----QIGPIHVVDEPF 452
++K F +I IH++ + F
Sbjct: 589 ISTKAGFKSFEKIAHIHLLPKEF 611
>gi|421107360|ref|ZP_15567912.1| AMP-binding enzyme [Leptospira kirschneri str. H2]
gi|410007376|gb|EKO61086.1| AMP-binding enzyme [Leptospira kirschneri str. H2]
Length = 645
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 130/440 (29%), Positives = 226/440 (51%), Gaps = 20/440 (4%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E++ D+AT +YTSGTTG PKGVML H++ I + + VP D+ + LPPWH+
Sbjct: 185 ESLVGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFVPGSYNDRTILFLPPWHIA 244
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ER + + G + +++ + D+Q+ +P ++SVP ++E LY I + S +
Sbjct: 245 ERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIHDTVRKSPLFK 304
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + ++I+ T + T + P+ L+D A + + P+ +L+
Sbjct: 305 QKLFHFAVKIAEITTNLQDTIRDSYATTKTENPNQ--KLLDRFVASVFLISMIPIKILSY 362
Query: 200 KLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
K++ + G + + G G++P HI F+ + G+ + YG+TE++ + A
Sbjct: 363 KILERVRDLFGGRIRFALCGAGAMPSHIQFFFRSAGIHIIETYGMTETTGIGAVGEFPIP 422
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
G++G P+ T IK+V V G KG+ +G V GY+K P T +AL +DGW
Sbjct: 423 KNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDGW 481
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
L++GDI + H+ G L GRAKDTIVLS GEN+EP +E S I Q
Sbjct: 482 LDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQ 531
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGEL--RKWTS 436
++V+GQD++ G +IVP + V + ++ + + ++ + K I+ + + K ++
Sbjct: 532 VIVVGQDRKNLGVLIVPFFDRVQEEFQNQAVKIPKEPTKWNSSKEITTFFKNIVKDKIST 591
Query: 437 KCSF----QIGPIHVVDEPF 452
K F +I +H++ + F
Sbjct: 592 KAGFKSFEKIAHVHILSKEF 611
>gi|418696266|ref|ZP_13257275.1| AMP-binding enzyme [Leptospira kirschneri str. H1]
gi|409955795|gb|EKO14727.1| AMP-binding enzyme [Leptospira kirschneri str. H1]
Length = 645
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 130/440 (29%), Positives = 226/440 (51%), Gaps = 20/440 (4%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E++ D+AT +YTSGTTG PKGVML H++ I + + VP D+ + LPPWH+
Sbjct: 185 ESLVGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFVPGSYNDRTILFLPPWHIA 244
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ER + + G + +++ + D+Q+ +P ++SVP ++E LY I + S +
Sbjct: 245 ERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIHDTVRKSPLFK 304
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + ++I+ T + T + P+ L+D A + + P+ +L+
Sbjct: 305 QKLFHFAVKIAEITTNLQDTIRDSYATTKTENPNQ--KLLDRFVASVFLISMIPIKILSY 362
Query: 200 KLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
K++ + G + + G G++P HI F+ + G+ + YG+TE++ + A
Sbjct: 363 KILERVRDLFGGRIRFALCGAGAMPSHIQFFFRSAGIHIIETYGMTETTGIGAVGEFPIP 422
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
G++G P+ T IK+V V G KG+ +G V GY+K P T +AL +DGW
Sbjct: 423 KNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTMGYYKEPEKTSKAL-QDGW 481
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
L++GDI + H+ G L GRAKDTIVLS GEN+EP +E S I Q
Sbjct: 482 LDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQ 531
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGEL--RKWTS 436
++V+GQD++ G +IVP + V + ++ + + ++ + K I+ + + K ++
Sbjct: 532 VIVVGQDRKNLGVLIVPFFDRVQEEFQNQAVKIPKEPTKWNSSKEITTFFKNIVKDKIST 591
Query: 437 KCSF----QIGPIHVVDEPF 452
K F +I +H++ + F
Sbjct: 592 KAGFKSFEKIAHVHILSKEF 611
>gi|408792990|ref|ZP_11204600.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408464400|gb|EKJ88125.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 641
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 155/458 (33%), Positives = 230/458 (50%), Gaps = 36/458 (7%)
Query: 16 HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFL 70
H + + I +DIAT +YTSGTTG PKGVMLTH ++L +I SL V GD L
Sbjct: 174 HKRGKQIQEEDIATIIYTSGTTGKPKGVMLTHGSILFEINSLVAEFRNTGVQVGEGDVTL 233
Query: 71 SMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQK 130
LPPWH ER F GI++ +T+V L DL + +P + +VP V+E+ Y I+
Sbjct: 234 GFLPPWHSGERIFETICFYSGIKIAFTSVPELGKDLAKTKPTILFTVPRVWESFYDKIKD 293
Query: 131 QIFTSSAARRVVARALIRISFAYT-----AFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 185
I S ++ + L+ S ++ AF RI R + ++L L ++
Sbjct: 294 TIHKSGLFKKYFLKILVWNSMNFSLCYDKAFDRI------PRLNESKTFLQVL-SQIFHL 346
Query: 186 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 244
I I PL L KLV KI S +G + +G G+L +D F AIG+ + YG+
Sbjct: 347 IKLIIYLPL-LPISKLVLSKILSVLGGRLRYAFAGAGALQAEVDRFMYAIGMPILEVYGM 405
Query: 245 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 304
TE+S V R +G+VG PI+ IK+++ E+ G KG+ G M+GY+
Sbjct: 406 TENSGVSTIRHYNDFSVGNVGKPIHGVTIKLINEFGKEITKPGIKGVAHHHGFHNMKGYY 465
Query: 305 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 364
TK L D WLN+GD+ G L GRAKDTIVLS GENVEP
Sbjct: 466 LEEEKTKAVLTADRWLNSGDLLVYTAQ----------GNLKFAGRAKDTIVLSGGENVEP 515
Query: 365 LELEEAALRSSLIRQIVVIGQDQRRPGAIIV--PDKEEVLMAAKRLSIVHADASELSKEK 422
+E +S I Q VV+GQD++ A+I+ DK + + + +S+ + +E
Sbjct: 516 EPIEICLKQSEFIDQAVVVGQDKKSLSALILLNLDKVQSYLNLQSISLDLNNCIFNEEET 575
Query: 423 TISLLYGELRKWTS-KCSFQ----IGPIHVVDEPFTVN 455
+ L+ E++++ S K F+ I I ++ PF ++
Sbjct: 576 ILKLIKEEVKRFVSDKNGFKSFERITNIFILQNPFVIH 613
>gi|421097581|ref|ZP_15558266.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200901122]
gi|410799408|gb|EKS01483.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200901122]
Length = 645
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 138/443 (31%), Positives = 226/443 (51%), Gaps = 26/443 (5%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E + D+AT +YTSGTTG PKGVML H++ I L + VP D+ + LPPWH+
Sbjct: 185 EILIGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQLQEFVPCSCNDRTIIFLPPWHIA 244
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ER + + G + +++ + D+Q+ +P ++SVP ++E LY I + + +
Sbjct: 245 ERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIHDTVRKAPPLK 304
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + +R++ T+ + T + P ID A L+P+ +L+
Sbjct: 305 QKLFHVAVRMAEITTSLQDTIRDSYTTIEIENPRQ--KTIDRFVASAFLLFLYPIKILSY 362
Query: 200 KLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
K++ + G + + G G++P HI F+ + G+ + YG+TE++ + A
Sbjct: 363 KILQRVKDLFGGRIRFALCGAGAMPPHIQFFFRSAGIPIIETYGMTETTGIGAIGEFPLP 422
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
G++G P+ T IK+V + V G KGI +G V GY+K P T +AL +DGW
Sbjct: 423 KNGAIGAPLPGTAIKLVGEDGRIVTAPGEKGIAWHKGPHVTVGYYKEPEKTAKAL-QDGW 481
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
L++GDI + H+ G L GRAKDTIVLS GEN+EP +E S I Q
Sbjct: 482 LDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFISQ 531
Query: 380 IVVIGQDQRRPGAIIVP--DK--EEVLMAAKRLSIVHADASELSKEKTISLLYGEL--RK 433
++V+GQD++ G +IVP D+ EE K+L D +E + K +S + + K
Sbjct: 532 VIVVGQDKKNLGVLIVPFFDRVYEEFQSKEKKLP---KDPTEWNSSKEVSSFFKNIVKDK 588
Query: 434 WTSKCSF----QIGPIHVVDEPF 452
++K F +I I+++ + F
Sbjct: 589 ISTKAGFKSFEKIAHIYILPKEF 611
>gi|159466184|ref|XP_001691289.1| long-chain-fatty-acid CoA ligase [Chlamydomonas reinhardtii]
gi|158279261|gb|EDP05022.1| long-chain-fatty-acid CoA ligase [Chlamydomonas reinhardtii]
Length = 555
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 133/366 (36%), Positives = 192/366 (52%), Gaps = 85/366 (23%)
Query: 42 GVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN 101
GVMLTH NL +Q+R+L + GD+ LS+LPPWH+YER C
Sbjct: 175 GVMLTHANLCYQVRNLSHFLQVRPGDRVLSLLPPWHIYERTCS----------------- 217
Query: 102 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 161
Y L SG Q+ YT +R+ +
Sbjct: 218 -------------------YFVLSSGGQQ---------------------VYTNIRRLRD 237
Query: 162 GFCLTRNQKQPSYLVAL---IDWLWARIICAI-LWPLHLLAEK---------------LV 202
P +LV + +D L AR++ I P H A LV
Sbjct: 238 DLV----AHPPDHLVCVPLVLDTLHARVVQKIQAGPRHRAAIATALLAAGAAYALASVLV 293
Query: 203 YKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT--CNV 260
Y+K++ A+G+ + +SGGGSL H+D FYEA+G++V G+GL+E++PV+A RR N+
Sbjct: 294 YRKVREALGVRRTVISGGGSLAAHLDDFYEALGLQVLNGWGLSETAPVLACRRAVEGQNI 353
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE-DGW 319
GSVG P T++++VD E+ LPAG +G+V RG VM GY+++P+A+ +A GW
Sbjct: 354 RGSVGVPTPGTQLRVVDPESLAPLPAGRQGLVLARGPGVMPGYWQDPAASAKAFRAGGGW 413
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
+TGD+GW+AP + C G LVL GRAKDT+VLS+G+NVEP +E+A S LI+
Sbjct: 414 FDTGDLGWVAPEGVPASN--CAGHLVLTGRAKDTLVLSSGKNVEPQPVEDAVAASPLIKF 471
Query: 380 IVVIGQ 385
+V++GQ
Sbjct: 472 VVLVGQ 477
>gi|418684399|ref|ZP_13245584.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|418740695|ref|ZP_13297072.1| AMP-binding enzyme [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|410741098|gb|EKQ85811.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|410752072|gb|EKR09048.1| AMP-binding enzyme [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 553
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 143/395 (36%), Positives = 203/395 (51%), Gaps = 72/395 (18%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS-----LYDIVPAENGDKFLSM 72
+ E I +D+ T +YTSGTTG PKGVML H N++HQ+ L DI P D LS+
Sbjct: 171 RIEEIKPEDLFTLIYTSGTTGMPKGVMLMHSNMIHQMVHVVPMLLTDIKPT---DSMLSI 227
Query: 73 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
LP WH++ER Y S GI+ YT V +L++DL + +P +M S P V+E +Y+ I ++
Sbjct: 228 LPIWHIFERVNEYGAISSGIQTYYTKVADLRNDLAKAKPSFMASAPRVWENVYANIYNKV 287
Query: 133 FT---SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICA 189
+ RR++ + S Y A +R G L + + + L +L+ + + II
Sbjct: 288 NDPKQTPTIRRILFKLAYFFSKHYNASRRFLNG--LEVDYENRNILKSLVIGIKSLIILL 345
Query: 190 ILWPLHLLA------------------------------------EKLVYKKIQSAIGIS 213
+ P L A + +V KI++A G
Sbjct: 346 LTGPFTLSAISILAYLTIPVYGAHLPNWIFFSLAGLGLVFNAKTLDTIVLSKIRAATGGR 405
Query: 214 -KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTE 272
KA +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E
Sbjct: 406 LKASLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSE 465
Query: 273 IKIVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
+ I D N EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+N
Sbjct: 466 LIIKDENGNVLTHINDQFEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMN 524
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 356
TGDIG+I L L GRAKDT+VL
Sbjct: 525 TGDIGFI----------NFKKTLTLTGRAKDTVVL 549
>gi|333370495|ref|ZP_08462494.1| long-chain-fatty-acid-CoA ligase [Desmospora sp. 8437]
gi|332977723|gb|EGK14486.1| long-chain-fatty-acid-CoA ligase [Desmospora sp. 8437]
Length = 611
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 150/423 (35%), Positives = 222/423 (52%), Gaps = 43/423 (10%)
Query: 19 YETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL-YDIVPAENGDKFLSMLPPWH 77
++ IG D + T ++TSGTTG PKG MLTH+NLL + + IV GD LS LP H
Sbjct: 168 WKNIGGDQLFTIIHTSGTTGPPKGAMLTHRNLLANTEGVQFWIVELVPGDVCLSYLPLSH 227
Query: 78 VYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 135
V+ER G F+ G + Y ++ ++++L +P M +VP + E +Y+ +Q+QI ++
Sbjct: 228 VFERMAGQFVPLREGATIAYAESIDTIQENLLEVRPTVMTTVPRLLEKIYAKVQEQIASA 287
Query: 136 SAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLH 195
S +R + ++A R YEGF R + L+ L I + L
Sbjct: 288 SPLKRKI------FNWAVDVGHRRYEGFIDAR--------MDLL--LKGEAIPSDLRRQF 331
Query: 196 LLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
LA++LV++KI+ +G G VSG L I F+ +I + V GYGLTE+SPVIAA
Sbjct: 332 ALADRLVFRKIKERVGGRLRGLVSGAAPLNQEIARFFWSIDIPVLEGYGLTEASPVIAAN 391
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
+ +G+VG P+ + E+KI G+ G + RG +MQGY+KN AT++AL
Sbjct: 392 PMMRSKIGTVGKPLPNLEVKI-----------GTDGEILARGPSIMQGYYKNEEATREAL 440
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
DGWL+TGD+G P G L + R K+ IVLSTG+NV P +E S
Sbjct: 441 -RDGWLHTGDLGEWDPD----------GFLRVVDRKKNLIVLSTGKNVAPQPVENHITNS 489
Query: 375 SLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI-SLLYGELRK 433
I Q V+IG ++ A++VPD E +L A + D L++ + L E+ K
Sbjct: 490 PYISQAVLIGNGRKYVIALVVPDYENLLPWAGKRGFPEQDPENLAEHPEVKKFLKEEVEK 549
Query: 434 WTS 436
T
Sbjct: 550 HTE 552
>gi|194333847|ref|YP_002015707.1| AMP-dependent synthetase and ligase [Prosthecochloris aestuarii DSM
271]
gi|194311665|gb|ACF46060.1| AMP-dependent synthetase and ligase [Prosthecochloris aestuarii DSM
271]
Length = 607
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 141/422 (33%), Positives = 214/422 (50%), Gaps = 50/422 (11%)
Query: 19 YETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHV 78
Y+ I DDIAT +YTSGTTG PKGVMLTH+N+ I+S I+ + D+ LS LP H
Sbjct: 177 YQMIKPDDIATIIYTSGTTGVPKGVMLTHRNICENIKSCSTIIRLDESDRSLSFLPLSHA 236
Query: 79 YERACGYF-IFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
YER GY+ +F+ G + + ++ + ++ +P + +VP +++ + + I KQI S
Sbjct: 237 YERTGGYYLLFACGAAIYLAESIETVSLNIAEAKPTIIFTVPRLFDRIRTNILKQIANES 296
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
++ +I+ C T Q S I L H
Sbjct: 297 PVKQ-----------------KIFNWACSTGMQYHKSSEKGK--------ISPTLTLQHK 331
Query: 197 LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
+AEKLVY KI G S + VSGG +LP + F++ +G+ + G+GLTE+SPV R
Sbjct: 332 VAEKLVYHKISQKFGGSLRFFVSGGAALPQKVGEFFQGLGITILEGFGLTETSPVTNVNR 391
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
P G+VG +N+ EI I S G + RG +M+GY+ + +ATK+ +
Sbjct: 392 PENVKFGTVGPVVNNVEISI-----------ASDGEILFRGPSIMKGYWNDEAATKEVI- 439
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
DGW +TGDIG + G L + R K IV S G+N+ PL +E S
Sbjct: 440 YDGWFHTGDIGELDED----------GYLRITDRKKHIIVTSGGKNIAPLPIEHLIAESP 489
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT 435
+ Q++V+G+ + A+IVP+ E+ A+ I A SEL K+K I+ L+ L +
Sbjct: 490 YVDQVMVVGEKRPFLTALIVPNYNELKNYAEENDISSASGSELLKDKQINKLFENLLRTV 549
Query: 436 SK 437
S+
Sbjct: 550 SR 551
>gi|183219534|ref|YP_001837530.1| long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189909676|ref|YP_001961231.1| long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167774352|gb|ABZ92653.1| Long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167777956|gb|ABZ96254.1| Long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 641
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 154/449 (34%), Positives = 222/449 (49%), Gaps = 38/449 (8%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI-----VPAENGDKFLSMLPPWHVYE 80
D+AT +YTSGTTG PKGVMLTH ++L +I++L V GD L LPPWH E
Sbjct: 184 DLATIIYTSGTTGKPKGVMLTHGSILFEIQALVSEFRKTGVKVGEGDVTLGFLPPWHSGE 243
Query: 81 RACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
R F GI++ +T+V L DL + +P + +VP V+E+ Y I+ I S ++
Sbjct: 244 RIFETICFYSGIKIAFTSVPELGKDLAKAKPTILFTVPRVWESFYDKIKDTIQKSHWIKK 303
Query: 141 VVARALI--RISFAYT---AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLH 195
+ L+ + F+ T AF RI P I ++ I I PL
Sbjct: 304 YFLKLLVWNSVQFSITYDKAFDRIPRLIT-------PKTFSLYILQIFNCIKLMIYLPL- 355
Query: 196 LLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
L K V KI S +G + +G G+L +D F AIG+ + YG+TE+S V R
Sbjct: 356 LPISKFVLSKILSVLGGRLRYAFAGAGALQAEVDRFMYAIGMPILEVYGMTENSGVSTIR 415
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
+G+VG PI IK++D E+ G KG+ G M+GY+ TK L
Sbjct: 416 HYNDFSVGNVGKPIQGVTIKLIDEFGKEIRKPGIKGVALHHGRHNMKGYYLEEEKTKAVL 475
Query: 315 DEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 373
+D WLN+GD + W G L GRAKDTIVLS GENVEP +E +
Sbjct: 476 TDDRWLNSGDLLVWTTQ-----------GNLKFAGRAKDTIVLSGGENVEPEPIEICLKQ 524
Query: 374 SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI--SLLYGEL 431
S I Q VV+GQD++ A+I+ + E+V K SI + + +E I L+ E+
Sbjct: 525 SDYIDQAVVVGQDKKTLSALIILNLEKVETYLKEQSINMNLKNSIYQEVEIIQKLIRNEV 584
Query: 432 RKWTS-----KCSFQIGPIHVVDEPFTVN 455
+ + S K +I ++++ PF V+
Sbjct: 585 KHFVSDKNGFKSFERISNVYILQNPFVVH 613
>gi|322368270|ref|ZP_08042839.1| AMP-dependent synthetase and ligase [Haladaptatus paucihalophilus
DX253]
gi|320552286|gb|EFW93931.1| AMP-dependent synthetase and ligase [Haladaptatus paucihalophilus
DX253]
Length = 653
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 141/415 (33%), Positives = 208/415 (50%), Gaps = 54/415 (13%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY---------DIVPAENGDKFLSMLPP 75
DD+AT +YTSGTTG PKGV LTH N + Y ++ + K +S LP
Sbjct: 215 DDLATLIYTSGTTGKPKGVRLTHWNFRSNVNQCYRRFGPRPDKEVPVVDQHSKTVSFLPL 274
Query: 76 WHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 133
HV+ER G+F+ F+ G + Y + L+DD + +P SVP VYE +Y I+ Q
Sbjct: 275 AHVFERTAGHFMMFAAGATVAYAESPDTLQDDFRAVRPTTGTSVPRVYERIYDAIRSQAD 334
Query: 134 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
S RR+ A + AY G R QK
Sbjct: 335 ESDLKRRIFEWA-TDVGKAYHEVDSPGVGL---RAQK----------------------- 367
Query: 194 LHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
LLA+KLV+ +++ +G + + +SGGGSL + Y +G+ + GYGLTE+SPVI+
Sbjct: 368 --LLADKLVFDQVKDGLGGNIEFFISGGGSLSADLCALYHGMGLPILEGYGLTETSPVIS 425
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP--AGSKGIVKVRGSQVMQGYFKNPSAT 310
P +G++G+P+ ++K+ D+ E AG G + V+G V GY+ P T
Sbjct: 426 VNPPEAPEIGTIGYPVVDEKVKVDDSVVGEQFSDAAGEVGELLVKGPNVTDGYWNKPEET 485
Query: 311 KQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA 370
+QA EDGW TGDI I P G + RAK+ +VLSTG+NV P +E+A
Sbjct: 486 EQAFTEDGWFRTGDIVEIRPD----------GYIAFRERAKELLVLSTGKNVAPGPIEDA 535
Query: 371 ALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTI 424
S ++ Q +V+G ++ A+IVP+ EEV A R + + D EL ++ T+
Sbjct: 536 FAASDIVEQCLVMGDGRKFVSALIVPNVEEVRERAAREGLSLPDDDRELCRDDTV 590
>gi|282898837|ref|ZP_06306824.1| hypothetical protein CRC_00129 [Cylindrospermopsis raciborskii
CS-505]
gi|281196364|gb|EFA71274.1| hypothetical protein CRC_00129 [Cylindrospermopsis raciborskii
CS-505]
Length = 289
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/263 (44%), Positives = 158/263 (60%), Gaps = 29/263 (11%)
Query: 211 GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 270
G K +SGGG+LP HID F+E IGV++ GYGLTE+SPV ARR N+ GS G PI
Sbjct: 7 GKIKQVISGGGALPRHIDNFFEMIGVEILQGYGLTETSPVTNARRIWRNLRGSSGQPIAG 66
Query: 271 TEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 330
T++KIV ET + LP G G+V ++G QVM GY++N ATKQ +D DGW N+GD+GW+ P
Sbjct: 67 TQVKIVHPETKDPLPPGKIGLVLLKGPQVMGGYYQNLEATKQVIDNDGWFNSGDLGWVTP 126
Query: 331 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 390
+ LVL GRAKDTIVLS GEN+EP +E+A LRS I QI+++GQDQR
Sbjct: 127 END----------LVLTGRAKDTIVLSNGENIEPQPIEDACLRSPYIDQIMLVGQDQRSL 176
Query: 391 GAIIVP--DKEEVLMAAKRLSIVHADASELSKEKTI------------SLLYGELRKWTS 436
GA+IVP D E + +++ D S ++++ I L EL +
Sbjct: 177 GALIVPNLDALEKWAEVENINLPTQDDSTENEDQKIGQKIDLENKIIQDLYRKELNREVQ 236
Query: 437 -----KCSFQIGPIHVVDEPFTV 454
+ +IGP ++ EPF++
Sbjct: 237 NRPGYRVDDRIGPFKLIPEPFSM 259
>gi|110597451|ref|ZP_01385738.1| AMP-dependent synthetase and ligase [Chlorobium ferrooxidans DSM
13031]
gi|110340995|gb|EAT59466.1| AMP-dependent synthetase and ligase [Chlorobium ferrooxidans DSM
13031]
Length = 610
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 143/436 (32%), Positives = 226/436 (51%), Gaps = 52/436 (11%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+AT +YTSGTTG PKGVMLTH+NL I+S I+ + D LS LP H YER G
Sbjct: 183 DDVATIIYTSGTTGLPKGVMLTHRNLCENIKSCSSIIRLDESDCGLSFLPLSHAYERTGG 242
Query: 85 YFI-FSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y++ FS G + + ++ + ++ +P + +VP +++ + I KQI + +A ++ +
Sbjct: 243 YYLLFSCGASIYLAESIETISMNMAEARPTIIFTVPRLFDRIKMSIIKQISSQNAIKQKI 302
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
++ E + N+K + A+L H LAEKLV
Sbjct: 303 FYWAVQTG----------EKYHRQLNEKGR--------------VTALLSLQHTLAEKLV 338
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
Y+KI+ G + VSGG +LP I F++A+ + + G+GLTE+SPV RP
Sbjct: 339 YEKIKHKFGGRLRYFVSGGAALPQKIGEFFQALEISILEGFGLTETSPVTHVNRPEKIKY 398
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
G+VG +N+ +KI AE E+L ++G +M+GY+K+ AT++ + DGW
Sbjct: 399 GTVGPAVNNVTVKI--AEDGEIL---------LKGPNIMKGYWKDEEATREVI-RDGWFC 446
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGDIG I G L + R K IV S G+N+ PL +E S + Q++
Sbjct: 447 TGDIGEIDKD----------GYLKITDRKKHIIVTSGGKNIAPLPIENLISESPFVDQVI 496
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK---C 438
VIG+ + A+IVPD E+++ A I A EL + K++ +Y +L + S+
Sbjct: 497 VIGEKRPFLIALIVPDFEKLMEYASSEGIQAATNKELIESKSVIQIYDKLMRTISRQLAT 556
Query: 439 SFQIGPIHVVDEPFTV 454
++ ++D+ FTV
Sbjct: 557 HEKVRKFLLIDDAFTV 572
>gi|193215784|ref|YP_001996983.1| AMP-dependent synthetase and ligase [Chloroherpeton thalassium ATCC
35110]
gi|193089261|gb|ACF14536.1| AMP-dependent synthetase and ligase [Chloroherpeton thalassium ATCC
35110]
Length = 607
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 137/440 (31%), Positives = 222/440 (50%), Gaps = 53/440 (12%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 80
TI DDIAT +YTSGTTGNPKGVMLTH+N+ I+S I+P D LS LP H YE
Sbjct: 179 TISEDDIATLIYTSGTTGNPKGVMLTHRNICENIKSCSAILPLSEDDACLSFLPLSHAYE 238
Query: 81 RACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
R GY++ F+ GI++ Y ++ + ++ +P +I+VP ++E + S I K + +
Sbjct: 239 RTVGYYLMFACGIKIYYAESIETISLNISEVRPTVVITVPRLFERIKSSILKNVDNGAEV 298
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
R+ + + + + + A +R +Q + LA
Sbjct: 299 RKKLFYWALHLGYQHHADQRSGRSNFFVESQ-------------------------YALA 333
Query: 199 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
L+ K+I+ G + VSGG +LP LF+EA+G+ + G+GLTE++PV RP
Sbjct: 334 NLLILKQIRERFGGRLRFFVSGGAALPPDTGLFFEALGITILEGFGLTETAPVTHVNRPG 393
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
G+VG + + E+KI D G + +RG +M+GY+++ +AT + + +
Sbjct: 394 KVKFGTVGTLLKNVEVKIAD-----------DGEILLRGPNIMKGYWQDDAATAEVI-RN 441
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GW +TGDIG I G L + R K IV S G+N+ PL +E + I
Sbjct: 442 GWFHTGDIGEIDSE----------GYLKITDRKKHIIVNSGGKNIAPLPIENRIHANKYI 491
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 437
Q +V+G+ + A+IVP+ E + AK+ + +++ EL I LY + + S+
Sbjct: 492 DQALVVGEKRPFLIALIVPNFENLEALAKQKGLAYSNFEELISHHEIYQLYTNILRDISR 551
Query: 438 ---CSFQIGPIHVVDEPFTV 454
++ ++ EPFT+
Sbjct: 552 ELASHERVRKFLLLSEPFTI 571
>gi|282896868|ref|ZP_06304874.1| hypothetical protein CRD_01572 [Raphidiopsis brookii D9]
gi|281198277|gb|EFA73167.1| hypothetical protein CRD_01572 [Raphidiopsis brookii D9]
Length = 289
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 116/263 (44%), Positives = 158/263 (60%), Gaps = 29/263 (11%)
Query: 211 GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 270
G K +SGGG+LP HID F+E IGV++ GYGLTE+SPV ARR N+ GS G PI
Sbjct: 7 GKIKQVISGGGALPRHIDNFFEIIGVEILQGYGLTETSPVTNARRIWRNLRGSSGQPIAG 66
Query: 271 TEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 330
T++KIV ET + LPAG G+V ++G QVM GY++N ATKQ +D GW N+GD+GW+ P
Sbjct: 67 TQVKIVHPETKDPLPAGKIGLVLLKGPQVMGGYYQNLEATKQVIDNHGWFNSGDLGWVTP 126
Query: 331 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 390
+ LVL GRAKDTIVLS GEN+EP +E+A LRS I QI+++GQDQR
Sbjct: 127 END----------LVLTGRAKDTIVLSNGENIEPQPIEDACLRSPYIDQIMLVGQDQRSL 176
Query: 391 GAIIVP--DKEEVLMAAKRLSIVHADASELSKEKTI------------SLLYGELRKWTS 436
GA+IVP D E + +++ D S ++++ I L EL +
Sbjct: 177 GALIVPNLDALEKWAEVENINLPTQDDSTENEDQKIGQKIDLENKIIQDLYRKELNREVQ 236
Query: 437 -----KCSFQIGPIHVVDEPFTV 454
+ +IGP ++ EPF++
Sbjct: 237 NRPGYRADDRIGPFKLILEPFSM 259
>gi|359689869|ref|ZP_09259870.1| long-chain-fatty-acid--CoA ligase [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418748860|ref|ZP_13305152.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
gi|418757738|ref|ZP_13313925.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|384115515|gb|EIE01773.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|404275929|gb|EJZ43243.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
Length = 642
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 130/388 (33%), Positives = 194/388 (50%), Gaps = 17/388 (4%)
Query: 16 HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPP 75
H E++ +DIAT +YTSGTTG PKGV+L H++ I L VPA D+ + LPP
Sbjct: 182 HSVGESLTENDIATIIYTSGTTGVPKGVVLKHRSFTWTINQLQQFVPANYSDRVVVFLPP 241
Query: 76 WHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 135
WH+ ER + S G L + V L D + +P ++SVP V+E LY I ++ S
Sbjct: 242 WHIAERILETALLSWGASLACSNVSQLTRDFEIIKPTVLVSVPRVWEALYRRIWDKVSKS 301
Query: 136 SAARRVVARALIRISFAYTA-FKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 194
S + + + +RI+ Y + + + T N + L D + + ++ + + L
Sbjct: 302 SPTKLAIFKTAVRIAETYNSLLDTVIGNYSETENSNKEE---KLTDTVVSVLLLPLFYFL 358
Query: 195 HLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
++LA+K++ G K G G++P I F+ ++GV + YG+TE++ + A
Sbjct: 359 NILAQKVLAPVRALFGGQLKFAFCGAGAMPPKIQFFFRSMGVPIIETYGMTETTGMGALG 418
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
GS+G IK+V + V G KGI +G V GY+KN T+
Sbjct: 419 SFPIPKTGSIGQVFPGAHIKLVGEQNEVVSKPGDKGIAWHKGPHVTAGYYKNEELTRSNF 478
Query: 315 DEDGWLNTGDIG-WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 373
DGW N+GD+ W G L GRAKDTIVLS+GENVEP +E L
Sbjct: 479 -VDGWFNSGDLFVWTKT-----------GELKFAGRAKDTIVLSSGENVEPEPIEGKILE 526
Query: 374 SSLIRQIVVIGQDQRRPGAIIVPDKEEV 401
+ +VIGQDQ+ +IVPD +V
Sbjct: 527 TGWALTAIVIGQDQKFLAVLIVPDFAKV 554
>gi|189500240|ref|YP_001959710.1| AMP-dependent synthetase and ligase [Chlorobium phaeobacteroides
BS1]
gi|189495681|gb|ACE04229.1| AMP-dependent synthetase and ligase [Chlorobium phaeobacteroides
BS1]
Length = 609
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 143/442 (32%), Positives = 223/442 (50%), Gaps = 53/442 (11%)
Query: 19 YETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHV 78
Y I DD AT +YTSGTTG PKGVMLTH+N+ ++S I+ + D+ LS LP H
Sbjct: 177 YTMIKPDDTATIIYTSGTTGLPKGVMLTHRNICENVKSCSSILRIDETDRSLSFLPLSHA 236
Query: 79 YERACGYF-IFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
YER GY+ +F+ G + + ++ + ++ +P + +VP +++ + + I KQI T S
Sbjct: 237 YERTGGYYLLFACGARIYLAESIETVSLNIAEAKPTIIFTVPRLFDRIRTNILKQIKTQS 296
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
++ + Y K++ EG +PS ++AL H
Sbjct: 297 PTKQKIFDWARATGIEYQ--KQLQEG--------KPSMILAL---------------KHG 331
Query: 197 LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
+A+KLVY KIQ G + + VSGG +LP I F++A G+ + GYGLTE+SPV R
Sbjct: 332 IADKLVYTKIQERFGGNLRYFVSGGAALPRKIGEFFQAFGITILEGYGLTETSPVTNVNR 391
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
P G+VG +++ +KI S G V RG +M+GY+ + SAT + +
Sbjct: 392 PEKVKFGTVGPVLDNVTLKI-----------ASDGEVLFRGPNIMKGYWNDESATGEVI- 439
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
DGW +TGDIG + G L + R K IV S G+N+ PL +EE +S
Sbjct: 440 HDGWFHTGDIGELDED----------GYLKITDRKKHIIVTSGGKNIAPLPIEELIAENS 489
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT 435
+ Q++VIG+ + A+IVP E++ A I L + K I +Y L +
Sbjct: 490 YVDQVMVIGEKRPFLVALIVPVFSELVSFADEQQITSKTRESLLENKEILKIYESLLRTI 549
Query: 436 SK---CSFQIGPIHVVDEPFTV 454
S+ ++ ++ EPF++
Sbjct: 550 SRQLATHEKVRKFILIQEPFSI 571
>gi|145219737|ref|YP_001130446.1| AMP-dependent synthetase and ligase [Chlorobium phaeovibrioides DSM
265]
gi|145205901|gb|ABP36944.1| AMP-dependent synthetase and ligase [Chlorobium phaeovibrioides DSM
265]
Length = 610
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/440 (31%), Positives = 223/440 (50%), Gaps = 52/440 (11%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 80
I DD AT +YTSGTTG PKGVMLTH+N+ ++S D++ + D LS LP H YE
Sbjct: 179 NISPDDTATLIYTSGTTGLPKGVMLTHRNICENVKSCSDLITLDETDCSLSFLPLSHAYE 238
Query: 81 RACGYFI-FSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
R GY++ F G + + ++ + ++ +P + +VP +++ + + +QKQI T S
Sbjct: 239 RTGGYYLLFGCGAAIYLAESIETVSLNIAEAKPTIIFTVPRLFDRIRANMQKQIATESQL 298
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
++ + SFA + ++ K+ S +AL H L+
Sbjct: 299 KQRI------FSFALSTGEQYNRQMA-----KKGSVSLAL-------------KAAHALS 334
Query: 199 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
KLVYKKI + G + VSGG +LP ++ ++G+ + GYGLTE+SP+ RP
Sbjct: 335 RKLVYKKILAKFGGRLRYFVSGGAALPKETGEYFSSLGITILEGYGLTETSPITNVNRPE 394
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
G+VG + + EI+I D G + +G +M+GY+K+ AT + + +D
Sbjct: 395 KVKFGTVGPTVRNVEIRIAD-----------DGEILFKGPNIMKGYWKDVEATAEVI-KD 442
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GW +TGDIG + G L + R K IV S G+N+ PL +E S +
Sbjct: 443 GWFHTGDIGRLDDD----------GYLTITDRKKHIIVTSGGKNIAPLPIEHLIAESPFV 492
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 437
Q++VIG+ + A+I+PD E++ A I A EL + K +S +Y +L + S+
Sbjct: 493 EQVIVIGEKRPFLIALIIPDFEKLREFAVTAGIGDATEKELLENKAVSQIYEKLLRSISR 552
Query: 438 ---CSFQIGPIHVVDEPFTV 454
++ +V EPFT+
Sbjct: 553 KLATHEKVRKFLLVAEPFTL 572
>gi|303257837|ref|ZP_07343847.1| putative long-chain-fatty-acid--CoA ligase [Burkholderiales
bacterium 1_1_47]
gi|330998741|ref|ZP_08322469.1| AMP-binding enzyme [Parasutterella excrementihominis YIT 11859]
gi|302859440|gb|EFL82521.1| putative long-chain-fatty-acid--CoA ligase [Burkholderiales
bacterium 1_1_47]
gi|329576238|gb|EGG57754.1| AMP-binding enzyme [Parasutterella excrementihominis YIT 11859]
Length = 610
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 145/449 (32%), Positives = 222/449 (49%), Gaps = 46/449 (10%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
K +I DD+A VYTSGTTG PKGVMLTH N+L ++S ++ + D FLS LP H
Sbjct: 175 KEVSIDPDDLAAIVYTSGTTGKPKGVMLTHDNVLSNVKSFSQVIDVGSDDVFLSFLPFSH 234
Query: 78 VYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 135
+ER YF G E+ + +V L +DL+ +P ++VP V+E +S I+ + +
Sbjct: 235 TFERTVTFYFTLFLGAEVGFARSVLKLAEDLKIIRPTIFVAVPRVFEQFHSRIKASLQSK 294
Query: 136 SAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLH 195
+ I + A A + FC PS + +D + +WP
Sbjct: 295 GS---------IAATLADQAEMIGWRRFCRRNGLAVPSSSASWLD--------SFIWP-- 335
Query: 196 LLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
+L ++V G + ++GG +L I FY A+GV+++ GYGLTE+SPVI+ R
Sbjct: 336 MLESRIVLPIRDVFGGRLRIAIAGGAALNNAIGRFYNAMGVELRQGYGLTETSPVISVNR 395
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
CN +VG PI +I++ D E ++V+G VM+GY+K P AT +
Sbjct: 396 ENCNNPVTVGQPIPGLQIRLGDIEE-----------LQVKGPTVMKGYWKRPDATAEVFT 444
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
EDGW TGD A GR R ++GR K+ IV STGE + P ++E A
Sbjct: 445 EDGWFRTGD---QADLSDAGRIR-------IKGRIKEIIVTSTGEKIPPTDMELAIQTDP 494
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT 435
L Q++V+G+ + A+ V ++ E AK ++ +D L + L+K
Sbjct: 495 LFEQVMVVGEARPFITALAVVNEAEWEKFAKEFNVDPSDDRMLMRRDIRMAALKRLKKAA 554
Query: 436 SKCSFQIG---PIHVVDEPFTVNFLCLAL 461
S+ Q G I ++ E +TV+ CL +
Sbjct: 555 SRFP-QYGIPRNIRLLKEHWTVDNGCLTV 582
>gi|339484361|ref|YP_004696147.1| AMP-dependent synthetase and ligase [Nitrosomonas sp. Is79A3]
gi|338806506|gb|AEJ02748.1| AMP-dependent synthetase and ligase [Nitrosomonas sp. Is79A3]
Length = 609
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 143/438 (32%), Positives = 225/438 (51%), Gaps = 57/438 (13%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
D +AT +YTSGT+G PKGVML+H+N+L S ++P GD LS LP H +ER G
Sbjct: 190 DSLATIIYTSGTSGRPKGVMLSHRNILTNASSCLQVIPVFPGDLLLSFLPLSHTFERTAG 249
Query: 85 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y++ G + Y +++ L++DL +P +ISVP +YE +Y+GI+ ++ S R +
Sbjct: 250 YYVPMMAGATIAYARSIQQLQEDLLTIRPTLLISVPRIYERVYAGIRAKLAEGSGFARWL 309
Query: 143 ARALIRISFAYTAFKRIYEGFCLT-RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
+ Y+ F+ C R +P++ C LWP + EKL
Sbjct: 310 FN--FAVDVGYSRFE------CQQGRGSWRPAH-------------C--LWP---VLEKL 343
Query: 202 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
V K+ + +G + +SGG +L + + +G+ + GYG+TESSPV+ A R NV
Sbjct: 344 VASKVMNKLGGRLRFVMSGGAALSTEVSRIFIGLGLPILQGYGMTESSPVVCANRIKDNV 403
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
SVG PI E+K+ E N +L +RG VM GY+ NP ATK + DGWL
Sbjct: 404 PASVGLPIPGVEVKL--GEGNALL---------IRGPNVMLGYWNNPEATKAIISSDGWL 452
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
N+GDI I + + GR K+ +VLSTGE V P ++E A LR L Q+
Sbjct: 453 NSGDIASIDEQDH----------VTITGRLKEIVVLSTGEKVPPADMEAAILRDPLFDQV 502
Query: 381 VVIGQDQRRPGAIIV--PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKC 438
++IG+ + ++V P ++ M L + +E +++ +L ++ TS+
Sbjct: 503 MLIGEARSYLSVLVVLNPALQKDFMTQYGLD--GSLDNEQQRQQAEEILLNKVAHQTSEF 560
Query: 439 S--FQIGPIHVVDEPFTV 454
+I I V+ EP+++
Sbjct: 561 PGYAKIRRIAVIPEPWSI 578
>gi|325982123|ref|YP_004294525.1| long-chain-fatty-acid--CoA ligase [Nitrosomonas sp. AL212]
gi|325531642|gb|ADZ26363.1| Long-chain-fatty-acid--CoA ligase [Nitrosomonas sp. AL212]
Length = 618
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 144/437 (32%), Positives = 221/437 (50%), Gaps = 55/437 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
D +AT +YTSGT+G PKGVML+H N+L S +VP D LS LP H +ER G
Sbjct: 199 DSLATIIYTSGTSGRPKGVMLSHHNILSNAFSCLQVVPVLPEDVLLSFLPLSHTFERTAG 258
Query: 85 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y++ G + Y ++ L++DL +P MISVP +YE +Y+GIQ ++ R +
Sbjct: 259 YYVPMMTGATIAYARSIPQLQEDLLIIRPTIMISVPRIYERVYAGIQAKLAEGPGFARWL 318
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
+ Y+ F+ C Q+ Y R + ++WP L +K V
Sbjct: 319 FN--FAVDVGYSRFE------C----QQGRGY----------RRLSHVVWP---LLKKWV 353
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
K+ +G + +SGG +L + + +G+ + GYG+TESSPV+ A R NV
Sbjct: 354 ADKVMGKLGGRLRMVMSGGAALSPQVSRVFIGLGLPILQGYGMTESSPVVCANRLEDNVP 413
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
SVG PI E+K+ E+N +L +RG VM GY+ NP AT+ + DGWLN
Sbjct: 414 ASVGLPIPGVEVKL--GESNALL---------IRGPNVMLGYWNNPEATQAVISSDGWLN 462
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
+GDI I G + + GR K+ IVLSTGE V P ++E A LR L Q++
Sbjct: 463 SGDIASIDAQ----------GHVTITGRLKEIIVLSTGEKVPPADMEAAILRDPLFEQVM 512
Query: 382 VIGQDQRRPGAIIV--PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCS 439
+IG+ + ++V P + + MA L +E +++ +L ++ + TS+
Sbjct: 513 LIGESRSYLSVLVVLNPARRQDFMAHYGLG--DDLTNEQQRQQAEEILLEKITRQTSEFP 570
Query: 440 --FQIGPIHVVDEPFTV 454
+I + V EP++V
Sbjct: 571 GYAKIRRVAVAQEPWSV 587
>gi|30249519|ref|NP_841589.1| AMP-dependent synthetase and ligase [Nitrosomonas europaea ATCC
19718]
gi|30138882|emb|CAD85460.1| AMP-dependent synthetase and ligase [Nitrosomonas europaea ATCC
19718]
Length = 612
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 132/375 (35%), Positives = 195/375 (52%), Gaps = 49/375 (13%)
Query: 27 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 86
+AT +YTSGTTG PKGVML+H N+L S +V D LS LP H +ER GY+
Sbjct: 195 LATIIYTSGTTGRPKGVMLSHNNILSNAYSSAQVVTVRPDDVLLSFLPLSHTFERTAGYY 254
Query: 87 I-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
+ G + Y ++R L+DDL +P +ISVP +YE +Y+GIQ ++ A R++ +
Sbjct: 255 VPMLCGATVAYARSIRQLQDDLLIIRPTILISVPRIYERIYAGIQAKLAEGPAISRLLFK 314
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
+ + Y+ F+ R QK+ + W I +LWP L +KLV +
Sbjct: 315 --LAVDIGYSRFE---------RQQKR-------VGWR----ISHLLWP---LLDKLVAR 349
Query: 205 KIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K+ +G V SGG +L I + +G+ + GYGLTE+SPV+ A R N+ S
Sbjct: 350 KVMEKLGGRLWQVMSGGAALSPEISRVFIGLGLPILQGYGLTETSPVVCANRLDDNLPSS 409
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
VG P E+++ G + + +RG VM GY+ NP AT L DGWLN+G
Sbjct: 410 VGRPAPGVEVRL-----------GEQNALLIRGPNVMLGYWNNPEATHAILSADGWLNSG 458
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D I +SR + + GR KD IV STGE + P ++E A LR + Q++++
Sbjct: 459 DTASI-----DAQSR-----VTITGRLKDIIVTSTGEKIPPADMEAAILRDPIFEQVMIV 508
Query: 384 GQDQRRPGAIIVPDK 398
G+ + A+ V K
Sbjct: 509 GEGRSYLSALTVLSK 523
>gi|114330717|ref|YP_746939.1| AMP-dependent synthetase and ligase [Nitrosomonas eutropha C91]
gi|114307731|gb|ABI58974.1| AMP-dependent synthetase and ligase [Nitrosomonas eutropha C91]
Length = 612
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 127/377 (33%), Positives = 194/377 (51%), Gaps = 49/377 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
D +AT +YTSGTTG PKGVML+H N+L + IV D LS LP H +ER G
Sbjct: 193 DSLATIIYTSGTTGRPKGVMLSHHNILSNAHACAQIVTVTPDDILLSFLPLSHTFERTAG 252
Query: 85 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y+ G + Y + R L +DL +P +ISVP +YE +Y GIQ+++ SA R++
Sbjct: 253 YYTPMLCGATIAYARSTRQLSEDLLIIRPTILISVPRIYERIYVGIQEKLAEGSAVARLL 312
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
+ + + ++ +++ G+ ++ +LWP L ++L+
Sbjct: 313 FKLAVDVGYSRFEYQQGRTGWRISH----------------------LLWP---LLDRLI 347
Query: 203 YKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
+K+ +G V SGG +L + + A+G+ + GYGLTE+SPV+ A R NV
Sbjct: 348 ARKVMEKLGGRLWQVMSGGAALSPEVSHTFIALGLPILQGYGLTETSPVVCANRLNDNVP 407
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
SVG PI E+K+ G + + +RG VM GY+ NP AT L DGWL+
Sbjct: 408 ASVGKPIPGVEVKL-----------GEQNALLIRGPNVMLGYWNNPEATSAILSADGWLD 456
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
+GD I +GR + + GR KD IV STGE + P ++E A L + Q++
Sbjct: 457 SGDTAQI---DEQGR-------ITITGRLKDIIVTSTGEKIPPADMEAAILHDPIFEQVM 506
Query: 382 VIGQDQRRPGAIIVPDK 398
+IG+ + A++V K
Sbjct: 507 IIGEGRSYLSALVVLSK 523
>gi|108804880|ref|YP_644817.1| AMP-dependent synthetase and ligase [Rubrobacter xylanophilus DSM
9941]
gi|108766123|gb|ABG05005.1| AMP-dependent synthetase and ligase [Rubrobacter xylanophilus DSM
9941]
Length = 592
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 130/389 (33%), Positives = 204/389 (52%), Gaps = 48/389 (12%)
Query: 12 IAGKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLS 71
+ G + ++G +D+AT +YTSGTTG PKG +LTH N+L + + D + D FLS
Sbjct: 164 LEGWEEGWRSLGREDVATIIYTSGTTGRPKGAVLTHGNILSNLEGIQDALTVYPEDVFLS 223
Query: 72 MLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQ 129
LP HV+ER CG F+ G + Y +V + ++L+ +P M SVP +YE ++ ++
Sbjct: 224 FLPLSHVFERTCGQFLALGVGASVYYAESVEKVPENLREVRPTVMPSVPRLYEKMHDRVR 283
Query: 130 KQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICA 189
+ S +R + A A +R YE L R + L R A
Sbjct: 284 AMVAGGSPVKRWL------FGRAVAAGRRRYE--VLDRGGRP---------GLPLRAALA 326
Query: 190 ILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESS 248
+ ++LV+++++ A+G + VSGG L + F+ A G+K+ GYGLTE+S
Sbjct: 327 VY-------DRLVFRRLREAVGGRVRFFVSGGAKLDTEVGKFFYAAGIKIMEGYGLTETS 379
Query: 249 PVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPS 308
PVIA R G+VG P+++ E++I +G ++VRG VM+GYF++
Sbjct: 380 PVIACNRLEKPRFGTVGLPLSNLEVRI-----------SPEGEIQVRGPSVMRGYFRDER 428
Query: 309 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 368
+T++A +DG+ TGDIG G L + R K IVLSTG+NV P +E
Sbjct: 429 STEEAFTQDGFFRTGDIGSFDED----------GYLTVTDRLKSLIVLSTGKNVAPQPIE 478
Query: 369 EAALRSSLIRQIVVIGQDQRRPGAIIVPD 397
A + + I Q VV+G+ ++ A++VPD
Sbjct: 479 SALVTAPHISQAVVVGEGRKYVSALVVPD 507
>gi|119357321|ref|YP_911965.1| AMP-dependent synthetase and ligase [Chlorobium phaeobacteroides
DSM 266]
gi|119354670|gb|ABL65541.1| AMP-dependent synthetase and ligase [Chlorobium phaeobacteroides
DSM 266]
Length = 610
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 138/436 (31%), Positives = 220/436 (50%), Gaps = 52/436 (11%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DDIAT +YTSGTTG PKGVMLTH+NL ++S ++ + D+ LS LP H YER G
Sbjct: 183 DDIATLIYTSGTTGLPKGVMLTHRNLCENVKSCSTVIRLDETDRSLSFLPLSHAYERTGG 242
Query: 85 YFI-FSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y++ FS G + + +V + ++ +P + +VP +++ + + KQI SA ++ +
Sbjct: 243 YYLLFSCGAAIYLAESVETVSLNIAEARPTIIFTVPRLFDRIKANTLKQIGNESAIKQKI 302
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
+ E F N K + L + H LA+KLV
Sbjct: 303 FFWALHTG----------EEFHRQMNAKGKAALAVSMQ--------------HSLADKLV 338
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
Y KI+ G + VSGG +LP + F++A+ + + GYGLTE+SPV RP L
Sbjct: 339 YAKIRKKFGGKLRYFVSGGAALPQKVGEFFQALSINILEGYGLTETSPVTNVNRPEKIKL 398
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
G+VG +N+ +I+I D G + ++G +M+GY+++ AT++ + +DGW
Sbjct: 399 GTVGPAVNNVQIRIAD-----------DGEILMKGPNIMKGYWQDEDATREVI-KDGWFY 446
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
+GDIG I G L + R K IV S G+N+ P +E S + Q++
Sbjct: 447 SGDIGEIDRD----------GYLKITDRKKHIIVTSGGKNIAPQPIENLISESPYVDQVI 496
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK---C 438
VIG+ + A+IVPD +++ AK SI L + K I +Y +L + S+
Sbjct: 497 VIGEKRPFLIALIVPDFSKLMEYAKENSISATTNKALIENKNIQQIYEKLMRTISRQLAT 556
Query: 439 SFQIGPIHVVDEPFTV 454
++ +VDE F++
Sbjct: 557 HEKVRKFLLVDEAFSI 572
>gi|332528557|ref|ZP_08404545.1| AMP-dependent synthetase and ligase [Hylemonella gracilis ATCC
19624]
gi|332042068|gb|EGI78406.1| AMP-dependent synthetase and ligase [Hylemonella gracilis ATCC
19624]
Length = 638
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 143/438 (32%), Positives = 230/438 (52%), Gaps = 40/438 (9%)
Query: 23 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERA 82
GSDD+A VYTSGTTG PKGVMLTH+N+L +++LY V D FLS LP H +ER
Sbjct: 206 GSDDLAAIVYTSGTTGKPKGVMLTHRNVLANVKALYPFVTPLPDDVFLSFLPLSHTFERT 265
Query: 83 CGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
GY++ + G ++Y +V+ L +D++R +P +ISVP +YE +++ +Q+ + S+ +R
Sbjct: 266 TGYYLPIASGSAVVYARSVQQLAEDMKRVRPTVLISVPRIYERVHARLQEVLAKSAFKQR 325
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+ A + ++R L + + A WL R++ P LL +
Sbjct: 326 LFEAAQAK------GWQRFRAAHGLKAAPGEDAAQAAKAGWL--RVL-----PWALL-RR 371
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LV + + + G + VSGG L + +G+ + GYG+TE+SPV+AA RP N
Sbjct: 372 LVAQPLMAQFGGRIRIAVSGGAPLAQAQARCFLGLGLPLLQGYGMTETSPVVAANRPDDN 431
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
+VG + +++I G+ ++VRG+ VM+GY+ P T + LD +GW
Sbjct: 432 DPATVGRALPGVQVRI-----------GANRELQVRGASVMRGYWNRPEDTARVLDAEGW 480
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
L+TGD I ++GR R + GR K+ IV STGE V P +LE+A L + L Q
Sbjct: 481 LSTGDQAEI---DAQGRIR-------ILGRIKEIIVTSTGEKVPPGDLEQAILDAPLFEQ 530
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCS 439
+ V+G+ + A+ V +E + AKRL + D L+ I+ ++ + T +
Sbjct: 531 VFVVGEQRPFIAAVAVVQADEWIKLAKRLGVDPRDDGSLAHPDVIAAALKQMERVTGSFA 590
Query: 440 FQIGP--IHVVDEPFTVN 455
P + + EP+ +
Sbjct: 591 RYAVPRAVTLTREPWNIE 608
>gi|82701230|ref|YP_410796.1| AMP-dependent synthetase and ligase [Nitrosospira multiformis ATCC
25196]
gi|82409295|gb|ABB73404.1| AMP-dependent synthetase and ligase [Nitrosospira multiformis ATCC
25196]
Length = 663
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/363 (34%), Positives = 189/363 (52%), Gaps = 51/363 (14%)
Query: 27 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 86
+AT +YTSGT+G+PKGVML+H N+L S +VP E D LS LP H +ER GY+
Sbjct: 247 LATIIYTSGTSGHPKGVMLSHHNILTNAHSCLQVVPIEESDVLLSFLPLSHTFERTAGYY 306
Query: 87 I-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS-AARRVVA 143
+ RG + Y ++ L++DL +P ++SVP +YE +Y+GI+ ++ +RR+
Sbjct: 307 VPMMRGSTVAYARSIPQLQEDLLIIRPTILVSVPRIYERVYAGIRAKLAEGPLLSRRLFD 366
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
A + Y F+ + R +K S+ LWP L E LV
Sbjct: 367 LA---VEIGYNRFE-----YQQGRAEKHFSH---------------ALWP---LLEILVA 400
Query: 204 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
KK+ S +G +A +SGG +L + + +G+ + GYG+TESSPV+ NV
Sbjct: 401 KKVMSKLGGRLRAAMSGGAALSSEVSRIFIGLGLPILQGYGMTESSPVVCCNTIEDNVPA 460
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
SVG PI E+K+ G + + +RG VM GY+ N AT+ + DGWLN+
Sbjct: 461 SVGRPIPGVEVKL-----------GEQNALLIRGPNVMLGYWNNEEATRAVMTPDGWLNS 509
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GDI I G + + GR K+ IV+STGE + P +E A LR L Q++V
Sbjct: 510 GDIAEIDE----------AGHIAITGRVKEIIVMSTGEKIPPANMEAAILRDPLFEQVMV 559
Query: 383 IGQ 385
+G+
Sbjct: 560 VGE 562
>gi|194336560|ref|YP_002018354.1| AMP-dependent synthetase and ligase [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309037|gb|ACF43737.1| AMP-dependent synthetase and ligase [Pelodictyon
phaeoclathratiforme BU-1]
Length = 610
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 217/416 (52%), Gaps = 49/416 (11%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+AT +YTSGTTG PKGVMLTH+N+ ++S I+ + D LS LP H YER G
Sbjct: 183 DDVATIIYTSGTTGLPKGVMLTHRNICENVKSCSSIMRLDESDCSLSFLPLSHAYERTGG 242
Query: 85 YF-IFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y+ IFS G + + ++ + ++ +P + +VP +++ + GI KQI + SA
Sbjct: 243 YYLIFSCGAAIYLAESIETISLNMSEARPTIIFTVPRLFDRIKMGILKQISSQSA----- 297
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
I+ Y A K E + N+K + +L H LAEKLV
Sbjct: 298 ----IKQKIFYWALK-TGEKYHQEINEKG--------------VAGKLLSAKHALAEKLV 338
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
YKKI++ G + VSGG +LP I F++A+ + + G+GLTE+SPV RP
Sbjct: 339 YKKIKNKFGGRLRYFVSGGAALPQKIGEFFQALDISILEGFGLTETSPVTHVNRPEKIKY 398
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
G+VG + + ++ I AE E+L ++G +M+GY+ + +AT++ + DGW +
Sbjct: 399 GTVGPAVENVQVMI--AEDGEIL---------LKGPNIMKGYWNDEAATREVI-RDGWFH 446
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGDIG I G L + R K IV S G+N+ P+ +E SS + Q++
Sbjct: 447 TGDIGVIDRD----------GYLKITDRKKHIIVTSGGKNIAPMPIENLISDSSYVDQVI 496
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 437
VIG+ + A+IVP+ ++ A I A EL + K++ ++ +L + S+
Sbjct: 497 VIGEKRPFLIALIVPEFNKLKEFAAAEGIQAASNKELIENKSVQQIFEKLLRTVSR 552
>gi|378824089|ref|ZP_09846634.1| AMP-binding enzyme [Sutterella parvirubra YIT 11816]
gi|378597083|gb|EHY30426.1| AMP-binding enzyme [Sutterella parvirubra YIT 11816]
Length = 608
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 140/436 (32%), Positives = 213/436 (48%), Gaps = 46/436 (10%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+D+A VYTSGTTG PKGVMLTH N + ++ + V G+ FLS LP H +ER G
Sbjct: 183 EDLAGIVYTSGTTGRPKGVMLTHANFVANVKDTLECVSPRAGEVFLSFLPLSHTFERMAG 242
Query: 85 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS-AARRV 141
Y++ + G + Y +V L +DL+ +P +ISVP VYE +++ +Q+++ SS +ARR+
Sbjct: 243 YYLALATGCTIAYNRSVLLLAEDLKTIRPQVIISVPRVYERIHARVQEKLKKSSPSARRL 302
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
A +R+ +A FC +N +P A W +I A L P ++
Sbjct: 303 FGEA-VRVGWA---------DFC-EKNGIRPE---ADAHRWWDGLIRAFLLP------RV 342
Query: 202 VYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
Q G + +SGG ++ + + +G+ + GYG+TE+SP+IA N
Sbjct: 343 RETLAQQFGGRLRVAISGGAAVNPKVARTFCGLGLPIIQGYGMTETSPIIAGNNLELNHP 402
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
+VGHP H E+++ G ++VRG VM+GY+ P T A DGWL
Sbjct: 403 DTVGHPFQHVEVRL-----------GEGDEIEVRGPSVMKGYWGRPEDTAAAFTPDGWLK 451
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGDIG P G+L ++GR K+ IV STGE + P +LE A L Q
Sbjct: 452 TGDIGEWTPE----------GMLRIKGRIKEIIVTSTGEKIPPADLESAIETDPLFAQTW 501
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQ 441
V+G+++ G + V +K E + D + LS + S + +
Sbjct: 502 VVGENRPYLGLVCVLEKNEWAALCAEEGLDPEDPASLSAARAKSSVLKRAKTAAGDFPHY 561
Query: 442 IGPIHVV--DEPFTVN 455
P VV EP+T+
Sbjct: 562 ALPRAVVLTQEPWTIE 577
>gi|385809651|ref|YP_005846047.1| Long-chain acyl-CoA synthetase [Ignavibacterium album JCM 16511]
gi|383801699|gb|AFH48779.1| Long-chain acyl-CoA synthetase [Ignavibacterium album JCM 16511]
Length = 611
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 140/441 (31%), Positives = 212/441 (48%), Gaps = 53/441 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E +D+ T +YTSGTTG PKGV+LTH N+L +R+ + P D FLS LP H++
Sbjct: 182 EMTKPEDVCTIIYTSGTTGEPKGVVLTHNNILSNVRAALECFPINKDDIFLSFLPLCHIF 241
Query: 80 ERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
ER GY+ F+ G + Y ++ + DL +P M +VP ++E +YS I K + +
Sbjct: 242 ERMAGYYTAFASGGTICYAESIETVAQDLIAVKPTIMTTVPRLFERIYSRIIKNVESQPE 301
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
++ + I Y + K+ + L H +
Sbjct: 302 KKQKIFHWAIETGKEYASAKK-------------------------KGKVSIPLAAKHKV 336
Query: 198 AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 256
A+KLV+KK++ G + +SGG +L + F+EA+G+ + GYGLTESSPVIAA R
Sbjct: 337 ADKLVFKKLRERTGGRLRFFISGGAALSKDLGEFFEAVGILIIEGYGLTESSPVIAANRV 396
Query: 257 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 316
G+VG P E+KI A E+L +G +MQGY+KN T +A
Sbjct: 397 DDYKFGTVGKPFPGVEVKI--APDGEIL---------AKGPNIMQGYYKNKKET-EATIV 444
Query: 317 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 376
DGWL+TGDIG G L + R K S G+ + P +E L S
Sbjct: 445 DGWLHTGDIGEFDAE----------GFLKITDRKKHLFKTSAGKYIAPTPIENLFLASKY 494
Query: 377 IRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI-SLLYGELRKWT 435
I Q V+IG + A+IVPD E + A I + +L ++ I LL EL +
Sbjct: 495 IDQFVLIGDRRMFLTALIVPDFEALKEYADSNKIPYTKVDDLVRDDRIYKLLESELNQMQ 554
Query: 436 SKCSF--QIGPIHVVDEPFTV 454
+ + ++ ++D+PF++
Sbjct: 555 RQLANYERVRKFALLDKPFSI 575
>gi|374852591|dbj|BAL55521.1| long-chain acyl-CoA synthetase [uncultured Acidobacteria bacterium]
Length = 555
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 135/408 (33%), Positives = 206/408 (50%), Gaps = 48/408 (11%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+AT +YTSGTTG PKGVMLTH N+ + + ++ + D LS+LP H +ER Y
Sbjct: 136 DLATLLYTSGTTGEPKGVMLTHGNITSNVTAAMRVLGYSSRDVVLSILPLSHSFERMAFY 195
Query: 86 FIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
G+ + Y + + ++L+ +P ++ VP ++E + + +I +S A + R
Sbjct: 196 CYLHAGLSIAYAESFDKVAENLRDIRPTVLVGVPRLFEKM----RARILEASRALPGLKR 251
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
L +++ A +R C R +++ L + W H +AE+ V
Sbjct: 252 HL--VAWGLRAGER-----C-ERARRRGDALSPWLRW------------QHAVAERTVLA 291
Query: 205 KIQSAIGISKAG--VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
+I+ IG+ +A +SGG +L + F+ +G+++ GYGLTE+SPV+ P N +G
Sbjct: 292 RIREHIGLDRARSLISGGAALSPDVAYFFLGLGLEILQGYGLTETSPVVTVNPPGANKIG 351
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
+VG PI E+KI AE E+L VRG VM GY+ P T A EDGWL T
Sbjct: 352 TVGRPIPGVEVKI--AEDGEIL---------VRGPNVMLGYYNRPEETAAAFTEDGWLRT 400
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD+G++ G LV+ R KD + S G+ V P LE + S LI Q VV
Sbjct: 401 GDVGFLD----------ADGYLVITDRKKDLMKTSGGKYVAPQALENRLVASPLIAQAVV 450
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
+G ++ P A+IVP+ E + A I +A +L I LY E
Sbjct: 451 VGDGRKFPAALIVPNFEALRRYAAAQGIPFREAHQLCAHPKIRRLYEE 498
>gi|89075579|ref|ZP_01161984.1| putative long-chain-fatty-acid-CoA ligase [Photobacterium sp.
SKA34]
gi|89048719|gb|EAR54291.1| putative long-chain-fatty-acid-CoA ligase [Photobacterium sp.
SKA34]
Length = 607
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/402 (32%), Positives = 203/402 (50%), Gaps = 47/402 (11%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+ T +YTSGTTG PKGVML + N+ QI + + + GD L LP HV+ERA
Sbjct: 178 DDLVTLIYTSGTTGTPKGVMLDYANIASQIEAHDQRLALDEGDTSLCFLPLSHVFERAWT 237
Query: 85 YFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
++ RG+ Y + N LK+ L +PHYM +VP V+E +YSGI ++ + R+++
Sbjct: 238 FYALHRGVVNCYLSDTNKLKEALITVKPHYMSAVPRVFEKIYSGIHDKVSRAPLHRKMIF 297
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
+ + A + + ++PS+L L ++LAEK+V
Sbjct: 298 TWAVNMGAKMAAAR---------QECREPSWL---------------LKKSYVLAEKVVL 333
Query: 204 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K+Q+ +G + K GG L I F+ AIG+ V++GYG+TE++ ++ +C
Sbjct: 334 SKLQAVLGGNIKFMPCGGAKLDAGIGRFFHAIGINVKLGYGMTETTATVSCWDDSCYNPD 393
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G P+ E+KI E NE+L VRG VM+GY+ P T + EDG+L T
Sbjct: 394 SIGMPMPGAEVKI--GEQNEIL---------VRGPMVMRGYYNMPEETAKNFTEDGFLKT 442
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD G++ G L + R K+ + S G+ + P +E A + I QI V
Sbjct: 443 GDAGYLDEQ----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAV 492
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 424
I ++ A+IVP E + A+ L+I + D EL K I
Sbjct: 493 IADTRKFVSALIVPCFETLEEHARELNIKYKDRLELVKHSQI 534
>gi|373459375|ref|ZP_09551142.1| AMP-dependent synthetase and ligase [Caldithrix abyssi DSM 13497]
gi|371721039|gb|EHO42810.1| AMP-dependent synthetase and ligase [Caldithrix abyssi DSM 13497]
Length = 597
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 193/383 (50%), Gaps = 48/383 (12%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+ DD AT +YTSGTTG PKG +LTH N L I + +V D FLS LP H++ER
Sbjct: 174 VKRDDWATIIYTSGTTGEPKGAVLTHGNFLSNIEGILGVVDLYAEDIFLSFLPLSHIFER 233
Query: 82 ACGYFIFS-RGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
G+F+ + +G + Y ++ + D++Q +P M+SVP +YE +Y+ + + + +
Sbjct: 234 LAGHFLSNHQGSTVAYAESIDTVADNMQEIKPTVMVSVPRLYEKIYARVLENVEMGPPLK 293
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
R +I + R Y + + N+K +L L + LA
Sbjct: 294 R-------KIFYWALGVGREYVNYVM--NKKPLPFL---------------LKKKYNLAN 329
Query: 200 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
KLV+ K+Q +G + VSGG L I F+ A G+ + GYGLTE+SPVI P
Sbjct: 330 KLVFHKLQERVGGRIRFFVSGGAPLSAEIAEFFTAAGLIILEGYGLTETSPVITVNLPDN 389
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
G VG P+ + E+KI E E+L RG VM GYFK ATK+ +D++G
Sbjct: 390 FKFGYVGPPLPNVEVKI--DEDGEIL---------TRGPHVMVGYFKKEDATKEVIDDEG 438
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
W +TGDIG I G L + R K+ IV S G+N+ P +E + + I
Sbjct: 439 WFHTGDIGLIDED----------GFLKITDRKKNIIVTSGGKNIAPQPIENMLVTTQYIE 488
Query: 379 QIVVIGQDQRRPGAIIVPDKEEV 401
Q VVIG ++ AIIVP E V
Sbjct: 489 QAVVIGDKRKFCTAIIVPAFEAV 511
>gi|90580779|ref|ZP_01236582.1| putative long-chain-fatty-acid-CoAligase [Photobacterium angustum
S14]
gi|90438047|gb|EAS63235.1| putative long-chain-fatty-acid-CoAligase [Vibrio angustum S14]
Length = 607
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 132/402 (32%), Positives = 202/402 (50%), Gaps = 47/402 (11%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+ T +YTSGTTG PKGVML + N+ QI + + + GD L LP HV+ERA
Sbjct: 178 DDLVTLIYTSGTTGTPKGVMLDYANIASQIEAHDQRLALDEGDTSLCFLPLSHVFERAWT 237
Query: 85 YFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
++ RG+ Y + N LK+ L +PHYM +VP V+E +YSGI ++ + R+++
Sbjct: 238 FYALHRGVVNCYLSDTNKLKEALITVKPHYMSAVPRVFEKIYSGIHDKVSRAPLHRKMIF 297
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
+ + A + + ++PS+L L + LAEK+V
Sbjct: 298 TWAVNMGAKMAAAR---------QECREPSWL---------------LKKSYALAEKVVL 333
Query: 204 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K+Q+ +G + K GG L I F+ AIG+ V++GYG+TE++ ++ +C
Sbjct: 334 SKLQAVLGGNIKFMPCGGAKLDAGIGRFFHAIGINVKLGYGMTETTATVSCWDDSCYNPD 393
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G P+ E+KI E NE+L VRG VM+GY+ P T + EDG+L T
Sbjct: 394 SIGMPMPGAEVKI--GEQNEIL---------VRGPMVMRGYYNMPEETAKNFTEDGFLKT 442
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD G++ G L + R K+ + S G+ + P +E A + I QI V
Sbjct: 443 GDAGYLDEQ----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAV 492
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 424
I ++ A+IVP E + A+ L+I + D EL K I
Sbjct: 493 IADTRKFVSALIVPCFETLEEHARELNIKYKDRLELVKHSQI 534
>gi|330448784|ref|ZP_08312431.1| AMP-binding enzyme family protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328492975|dbj|GAA06928.1| AMP-binding enzyme family protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 607
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 135/403 (33%), Positives = 202/403 (50%), Gaps = 49/403 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+ T +YTSGTTG PKGVML + N+ QI + + + G L LP HV+ERA
Sbjct: 178 DDLITLIYTSGTTGTPKGVMLDYANIASQIEAHDQRLALDEGGTSLCFLPLSHVFERAWT 237
Query: 85 YFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
+++ RG+ Y + N LK+ L +PHYM +VP V+E +YSGI + V+
Sbjct: 238 FYVLHRGVVNCYLSDTNKLKEALVTVKPHYMSAVPRVFEKIYSGIHDK----------VS 287
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQ-KQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
RA + +T + + R + ++PS+L L H LAEK+V
Sbjct: 288 RAQLHRKMIFTWAVNMGAKMSVARQECREPSWL---------------LKKSHALAEKVV 332
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
K+Q+ +G + K GG L I F+ AIG+ V++GYG+TE++ ++ +C
Sbjct: 333 LSKLQAVLGGNIKFMPCGGAKLDAGIGRFFHAIGINVKLGYGMTETTATVSCWDDSCYNP 392
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
S+G P+ E+KI + NE+L VRG VM+GY+ P T + EDG+L
Sbjct: 393 DSIGMPMPGAEVKI--GQENEIL---------VRGPMVMRGYYNMPEETAKNFTEDGFLK 441
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD G+I G L + R K+ + S G+ + P +E A + I QI
Sbjct: 442 TGDAGYIDEQ----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIA 491
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 424
VI ++ A+IVP E + A+ L+I + D EL K I
Sbjct: 492 VIADTRKFVSALIVPCFETLEEHARELNIKYKDRLELIKHSQI 534
>gi|320353996|ref|YP_004195335.1| AMP-dependent synthetase and ligase [Desulfobulbus propionicus DSM
2032]
gi|320122498|gb|ADW18044.1| AMP-dependent synthetase and ligase [Desulfobulbus propionicus DSM
2032]
Length = 634
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 137/440 (31%), Positives = 228/440 (51%), Gaps = 53/440 (12%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+ S+D+AT +YTSGTTG PKGVML+H+N+L ++ + PA D FLS LP H +ER
Sbjct: 191 LQSNDLATIIYTSGTTGRPKGVMLSHRNILWNCWAVLQVHPARPDDLFLSFLPLSHSFER 250
Query: 82 ACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
GY++ G + Y +++ L +D++ +P +ISVP +YE + + I++Q+
Sbjct: 251 TVGYYVPMMAGCCIAYCRSLQELAEDMRLIRPTILISVPRIYERIAARIEEQLERKGRLA 310
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
R + A + + F R +E R+Q+ P+ LI WP LL +
Sbjct: 311 RWLFAAAVTVGF------RCFEA---QRDQRTPTLRDRLI------------WP--LLRQ 347
Query: 200 KLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
+ ++ G + V+GG + I + IG+ + GYGLTE++PV++ P N
Sbjct: 348 LVAIPMLERFGGRVRLAVTGGAPVQEGISRLFLGIGLPLVQGYGLTEAAPVVSTNEPANN 407
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
+VG P+ E+++ AE +E+L VRG VM GY++ P T + LD DGW
Sbjct: 408 RPTTVGPPLPGIEVRL--AEDHELL---------VRGPGVMLGYWQQPELTAEVLDADGW 456
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
L TGDI I H G + + GR+K+ +V STGE V P+ +E A + LI Q
Sbjct: 457 LKTGDIARI--DH---------GFIRIIGRSKEILVTSTGEKVAPVAMEMALEQHPLIDQ 505
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL----SKEKTISLLYGELRKWT 435
+V+G+ + A++V + + + A L + D + L ++ +S + G LR +
Sbjct: 506 AMVVGEGRPHVAALLVVNPQAWMRLAAHLGLDADDPASLDSDAARAAALSTVSGLLRAFP 565
Query: 436 SKCSFQIGPIHVVDEPFTVN 455
+ Q+ + ++ E +T++
Sbjct: 566 APA--QVRGVCLLSEEWTID 583
>gi|374586879|ref|ZP_09659971.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
gi|373875740|gb|EHQ07734.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
Length = 656
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 131/407 (32%), Positives = 207/407 (50%), Gaps = 30/407 (7%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I DD+AT +YTSGTTG PKGVMLTH+N ++ + P D+ + LPPWH+ ER
Sbjct: 198 IRPDDLATIIYTSGTTGTPKGVMLTHRNFCWEVAQVQLSTPLNEKDRAVIFLPPWHIAER 257
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
+ + G + +++ +L DLQ +P ++SVP V+E LY I + ++
Sbjct: 258 VLELTLIACGASMANSSILHLAGDLQTIRPTLLVSVPRVWEQLYKRIMDGVRKQPEEKQK 317
Query: 142 VARALIRIS-FAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL----WPLHL 196
+ + ++ A +++ L ++ P+ W+ I A+L W L+L
Sbjct: 318 IFHMAVNVAGLHMDALDNLFDRIALI-EEETPAQT-----WIRKGISVAVLLVTFW-LNL 370
Query: 197 LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
A+ +V KK++ G +SG G+LP HI F+ ++ + + YG+TE++ V R
Sbjct: 371 PAQ-IVLKKVKDIFGGRLNYAISGAGALPGHIADFFRSVYIPIVDAYGMTETTAVSVMGR 429
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
VG P+ I++ D + G +G+ +G +M+GY++ T + L
Sbjct: 430 LPWPRRACVGPPLPGVHIQLRDEYGRIITRPGERGVAWHKGPHIMKGYYRAQDKTDEVL- 488
Query: 316 EDGWLNTGDI-GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
+DGWLN+GD+ W G + GRAKDTIVL+ GENVEP +E S
Sbjct: 489 QDGWLNSGDLFAWTTT-----------GEIRFTGRAKDTIVLAGGENVEPGPIELRLAAS 537
Query: 375 SLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 421
I Q+VV+GQD++ A+IVP K+ V A+ L+ V A E E
Sbjct: 538 PYIAQVVVVGQDRKSLAALIVPHKDRV---AEELTKVGHTAPEAMTE 581
>gi|268316194|ref|YP_003289913.1| AMP-dependent synthetase and ligase [Rhodothermus marinus DSM 4252]
gi|262333728|gb|ACY47525.1| AMP-dependent synthetase and ligase [Rhodothermus marinus DSM 4252]
Length = 633
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 140/453 (30%), Positives = 222/453 (49%), Gaps = 52/453 (11%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E + DD++ +YTSGTTG PKGVMLTH+N +++ V D LS LP H +
Sbjct: 181 EQVQPDDLSALIYTSGTTGLPKGVMLTHRNFCSNVQAALQRVDFGPADHHLSFLPLCHSF 240
Query: 80 ERACGYF-IFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
ER GY + + G + Y ++ L +L +P MISVP ++E +Y+ I K + S +
Sbjct: 241 ERTAGYTAVLACGARISYAESIEALSQNLLEVRPTVMISVPRLFERVYNAIHKSVEKSPS 300
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
++ + + + A + L R +L H L
Sbjct: 301 LQQKIFHWAVGVGRRMAACR------------------------LEGRTPGPVLQLQHRL 336
Query: 198 AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 256
A +LV++K+ +G + + VSGG +LP HI F+ AIG+ + GYGLTE++PV+ P
Sbjct: 337 AHRLVFQKLHDRLGGNLRFAVSGGAALPRHIGEFFLAIGLTIIEGYGLTETAPVLTVNPP 396
Query: 257 TCNVLGSVGHPI--------NHTEIKIVDAETNEVLPAG---SKGIVKVRGSQVMQGYFK 305
G+VG + T+ KIV + + P+ +G + V+G VM+GY+
Sbjct: 397 DRPRFGTVGWVLPGVTIAIQRLTDGKIVGQLSGDDYPSDLTTEEGEILVKGPNVMKGYWN 456
Query: 306 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 365
N AT++ D DGW +TGD+G R G LV+ R K IV G+N+ P
Sbjct: 457 NEEATREVFDADGWFHTGDVG-----------RFDRGYLVITDRIKHMIVSRGGKNIYPG 505
Query: 366 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA-DASELSKEKTI 424
+E+ + I QIVVIG+ + A+IVPD E + A+ ++ A D + L+ +
Sbjct: 506 PIEDQLKQEPWIDQIVVIGEGREFLTALIVPDFEALRQYAQEHNLQAASDEALLALPEIR 565
Query: 425 SLLYGELRKWT--SKCSFQIGPIHVVDEPFTVN 455
+L LR++ + +I ++ EPFT+
Sbjct: 566 ALFEQSLRRYNRHAPAHERIRAFRLLSEPFTIE 598
>gi|345304087|ref|YP_004825989.1| Long-chain-fatty-acid--CoA ligase [Rhodothermus marinus
SG0.5JP17-172]
gi|345113320|gb|AEN74152.1| Long-chain-fatty-acid--CoA ligase [Rhodothermus marinus
SG0.5JP17-172]
Length = 633
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 140/453 (30%), Positives = 222/453 (49%), Gaps = 52/453 (11%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E + DD++ +YTSGTTG PKGVMLTH+N +++ V D LS LP H +
Sbjct: 181 EQVQPDDLSALIYTSGTTGLPKGVMLTHRNFCANVQAALQRVDFGPADHHLSFLPLCHSF 240
Query: 80 ERACGYF-IFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
ER GY + + G + Y ++ L +L +P MISVP ++E +Y+ I K + S +
Sbjct: 241 ERTAGYTAVLACGARISYAESIEALSQNLLEVRPTVMISVPRLFERVYNAIHKSVEKSPS 300
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
++ + + + A + L R +L H L
Sbjct: 301 LQQKIFHWAVGVGRRMAACR------------------------LEGRTPGPVLQLQHRL 336
Query: 198 AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 256
A +LV++K+ +G + + VSGG +LP HI F+ AIG+ + GYGLTE++PV+ P
Sbjct: 337 AHRLVFQKLHDRLGGNLRFAVSGGAALPRHIGEFFLAIGLTIIEGYGLTETAPVLTVNPP 396
Query: 257 TCNVLGSVGHPI--------NHTEIKIVDAETNEVLPAG---SKGIVKVRGSQVMQGYFK 305
G+VG + T+ KIV + + P+ +G + V+G VM+GY+
Sbjct: 397 DRPRFGTVGWVLPGVTIAIQRLTDGKIVGQLSGDDYPSDLTTEEGEILVKGPNVMKGYWN 456
Query: 306 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 365
N AT++ D DGW +TGD+G R G LV+ R K IV G+N+ P
Sbjct: 457 NEEATREVFDADGWFHTGDVG-----------RFDQGYLVITDRIKHMIVSRGGKNIYPG 505
Query: 366 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA-DASELSKEKTI 424
+E+ + I QIVVIG+ + A+IVPD E + A+ ++ A D + L+ +
Sbjct: 506 PIEDQLKQEPWIDQIVVIGEGREFLTALIVPDFEALRQYAQEHNLQAASDEALLALPEIR 565
Query: 425 SLLYGELRKWT--SKCSFQIGPIHVVDEPFTVN 455
+L LR++ + +I ++ EPFT+
Sbjct: 566 ALFEQSLRRYNRHAPAHERIRAFRLLSEPFTIE 598
>gi|291614318|ref|YP_003524475.1| AMP-dependent synthetase and ligase [Sideroxydans lithotrophicus
ES-1]
gi|291584430|gb|ADE12088.1| AMP-dependent synthetase and ligase [Sideroxydans lithotrophicus
ES-1]
Length = 602
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 128/395 (32%), Positives = 197/395 (49%), Gaps = 63/395 (15%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
++A+ +YTSGTTG PKGVML+H N+L D LS LP H +ER CGY
Sbjct: 184 ELASIIYTSGTTGRPKGVMLSHNNMLSNTYDAMATFMVRGDDLLLSFLPLSHTFERTCGY 243
Query: 86 FI---------FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
++ ++R I L L +DL+ +P +ISVP +YE +Y I ++
Sbjct: 244 YLQVMTAATVAYARSIPL-------LSEDLKTIKPTILISVPRIYERIYGAISTKLAEGP 296
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
A +R++ + + +A ++ G+ +PS+L LWP
Sbjct: 297 AFKRMLFHLAVEVGWARFLHQQRRGGW-------KPSFL---------------LWP--- 331
Query: 197 LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
L +KLV +KI +G + VSGG +L I + +G+ V GYGLTE+SP+++ +
Sbjct: 332 LLDKLVAQKILERLGGRLRTTVSGGAALAPEISRVFVGLGLPVVQGYGLTETSPIVSGNK 391
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
N SVG PI ++K+ G + + V+G VM GY+ NP AT+ +D
Sbjct: 392 LDNNFPDSVGQPIRGVQVKL-----------GEQHALLVKGPNVMMGYWNNPEATRAMID 440
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
DGWLNTGDI I+ G + + GR K+ IVLS GE + P ++E A L
Sbjct: 441 ADGWLNTGDIAHISET----------GHIYITGRLKEIIVLSNGEKMPPADMEAAILHDP 490
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 410
LI Q+++ G+ + A+ V + E L A ++ +
Sbjct: 491 LIDQVMIYGEGRPYLIALAVLNPEVWLQVAAKVGV 525
>gi|189346901|ref|YP_001943430.1| AMP-dependent synthetase and ligase [Chlorobium limicola DSM 245]
gi|189341048|gb|ACD90451.1| AMP-dependent synthetase and ligase [Chlorobium limicola DSM 245]
Length = 610
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 132/416 (31%), Positives = 215/416 (51%), Gaps = 49/416 (11%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD AT +YTSGTTG PKGVMLTH NL ++S ++ + D LS LP H YER G
Sbjct: 183 DDTATIIYTSGTTGLPKGVMLTHGNLCENVKSCSSVIRLDETDCSLSFLPLSHAYERTGG 242
Query: 85 YFI-FSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y++ F+ G + + ++ + ++ +P + +VP +++ + + + KQI + SA ++ +
Sbjct: 243 YYLLFACGAAIYLAESIETISLNIAEAKPTIIFTVPRLFDRMKANMLKQISSESAIKQKI 302
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
++ E + N+K + + I H LA+KLV
Sbjct: 303 FNWAVKTG----------EQYHRQVNEKNRASITLSIQ--------------HNLADKLV 338
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
Y KI+ G + VSGG +LP I F++A+G+ + G+GLTE+SPV RP
Sbjct: 339 YHKIRKKFGGRLRYFVSGGAALPQKIGEFFQALGINILEGFGLTETSPVTNVNRPDKIKF 398
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
G+VG + + ++KI AE E+L ++G +M+GY+++ +ATK+ + DGW
Sbjct: 399 GTVGPAVKNVQVKI--AEDGEIL---------LKGPNIMKGYWQDETATKEVI-RDGWFY 446
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
+GDIG I G L + R K IV S G+N+ P +E + S+ + Q++
Sbjct: 447 SGDIGEIDRD----------GYLKITDRKKHIIVTSGGKNIAPQPIENLIIESAFVDQVI 496
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 437
VIG+ + A+IVPD ++ A + SI EL + K I +Y +L + S+
Sbjct: 497 VIGEKRPFLIAVIVPDFVKLNEYAAQNSISAKTNKELIENKAIQQIYEKLMRNISR 552
>gi|408672874|ref|YP_006872622.1| AMP-dependent synthetase and ligase [Emticicia oligotrophica DSM
17448]
gi|387854498|gb|AFK02595.1| AMP-dependent synthetase and ligase [Emticicia oligotrophica DSM
17448]
Length = 588
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 137/442 (30%), Positives = 216/442 (48%), Gaps = 56/442 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
++I +DD+ T +YTSGTTGNPKGVML+H NL+ S D P + + LS LP HVY
Sbjct: 167 QSIKTDDLLTIIYTSGTTGNPKGVMLSHLNLISNFESCRDNFPIDETCRALSFLPLNHVY 226
Query: 80 ERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ER Y S+G+ + Y + + DDL+ +P +VP + E +Y I + + S
Sbjct: 227 ERMVLYLYMSKGMSIYYAQNMATIADDLRDVKPQIFTTVPRLLEKVYDKIVAKGYELSGL 286
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
+R + + + Y NQ+ ++ + W A
Sbjct: 287 KRKIFLWALDLGLKYDP------------NQQFSAWYNFQLKW----------------A 318
Query: 199 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR-- 255
+KLV+ K Q A+G + + SG +L + + A G+ V GYG+TE+SPVIA R
Sbjct: 319 QKLVFSKWQEALGGNIRMICSGAAALQPRLARVFWAAGIPVSEGYGMTETSPVIATNRVM 378
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
P + +VG I+ T +KI AE E+L V+G VM GY+ P TK+ +D
Sbjct: 379 PLDLRISTVGPIIDGTTVKI--AEDGEIL---------VKGPNVMLGYYNKPELTKEVID 427
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
DGWL+TGDIG + G L + R K+ S G+ V P LE S
Sbjct: 428 ADGWLHTGDIGKLDE----------GKYLKITDRKKEIFKTSGGKYVAPQVLENKMKESV 477
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH-ADASELSKEKTISLLYGELRKW 434
I Q++V+G+ Q+ P A+I+P+ + K I + DA + ++ + L++ E+ K+
Sbjct: 478 FIEQMMVVGESQKFPAALIIPEFVALRDWCKTQGIDYTTDAEIIKNQQVLKLIFSEISKF 537
Query: 435 TSKCS--FQIGPIHVVDEPFTV 454
+ + Q+ ++ P+T+
Sbjct: 538 NKEFAQYEQVKKFTLLANPWTI 559
>gi|78189102|ref|YP_379440.1| long-chain fatty-acid-CoA ligase [Chlorobium chlorochromatii CaD3]
gi|78171301|gb|ABB28397.1| long-chain fatty-acid-CoA ligase [Chlorobium chlorochromatii CaD3]
Length = 610
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 141/437 (32%), Positives = 220/437 (50%), Gaps = 54/437 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+AT +YTSGTTG PKGVMLTH+NL ++S ++ D LS LP H YER G
Sbjct: 183 DDVATIIYTSGTTGLPKGVMLTHRNLCENVKSCSTVLELNESDCALSFLPLSHAYERTGG 242
Query: 85 YFI-FSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA-ARRV 141
Y++ F+ G ++ + ++ + ++ +P + +VP +++ + + + KQI A+++
Sbjct: 243 YYLLFACGTQIYIAESIETVSLNMSEVKPTIIFTVPRLFDRIRAILLKQIGEQPPPAQKL 302
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
AL Q Y AL A + A+ H LA +L
Sbjct: 303 FEWAL----------------------QTGEEYYQALSSCGSAPPLLAMQ---HNLASQL 337
Query: 202 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
+YKKI +G + VSGG +LP I F++A+ V + G+GLTE+SPV RP
Sbjct: 338 IYKKIHQKMGGRLRYFVSGGAALPQKIGEFFQALDVPILEGFGLTETSPVTHVNRPEKIK 397
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
G+VG IN+ E +I AE E+L ++G +M+GY+ + AT++ L +DGW
Sbjct: 398 YGTVGKAINNVETRI--AEDGEIL---------LKGPNIMKGYWNDEEATREVL-KDGWF 445
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
TGD+G I G L + GR K IV S G+N+ PL +E + I Q+
Sbjct: 446 YTGDLGEI----------DSDGYLKITGRKKHIIVTSGGKNIAPLPIENLIAENPFIGQV 495
Query: 381 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTS---K 437
+VIG+ + A+IVP + A++ SI EL + K + +Y EL + S
Sbjct: 496 LVIGEKRPFLVALIVPAFPHLQAHARKESIQATTNRELMEHKKVQQIYEELLRTISMQLA 555
Query: 438 CSFQIGPIHVVDEPFTV 454
+I +++ PFT+
Sbjct: 556 THEKIRKFILIENPFTI 572
>gi|326800700|ref|YP_004318519.1| long-chain-fatty-acid--CoA ligase [Sphingobacterium sp. 21]
gi|326551464|gb|ADZ79849.1| Long-chain-fatty-acid--CoA ligase [Sphingobacterium sp. 21]
Length = 633
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/395 (33%), Positives = 199/395 (50%), Gaps = 50/395 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHV 78
E I DI+T +YTSGTTG PKGVMLTH NL + +R+ D I+ + D FLS LP HV
Sbjct: 185 EGILMSDISTLIYTSGTTGTPKGVMLTHSNLTNNVRACLDQILEVDQHDTFLSFLPLSHV 244
Query: 79 YERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
+ER Y + + G ++ Y ++ L ++ +P + +VP + E ++ K S
Sbjct: 245 FERTATYHVCLALGAKIAYAQSIDLLAKNMYEVKPTVICAVPRLLEKIHDKAMKNGIQSG 304
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
A+ + + + Y K + K+P IL +
Sbjct: 305 GAKAAIFKWALLTGKQYREKKEL---------GKKPG---------------PILTTQYN 340
Query: 197 LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LAE+LV+ KI+ G K +SGGG+LP ++ F+ IG+K+ GYGLTE+SPV+A
Sbjct: 341 LAERLVFNKIKEKTGGRLKFMISGGGALPQNVGEFFGNIGIKILEGYGLTETSPVVAVTE 400
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS-----------KGIVKVRGSQVMQGYF 304
V G+VG + EI I D E+ ++ S +G + +RG +M+GY+
Sbjct: 401 FHRQVYGTVGRVLPGIEIAIQDIESLKIHTVQSHASFDPNLETEEGEIIIRGHCIMKGYW 460
Query: 305 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 364
P TK +D DGW +TGDIG + G L + R K+ IV + G+NV P
Sbjct: 461 NKPEETKHVIDSDGWFHTGDIG-----------KFYKGNLKITDRLKNMIVNAYGKNVYP 509
Query: 365 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
+E L+S I QI +IG ++ A+IVP++E
Sbjct: 510 TPVENTYLKSKRIEQIFLIGDNREYLTALIVPNQE 544
>gi|313672314|ref|YP_004050425.1| amp-dependent synthetase and ligase [Calditerrivibrio nitroreducens
DSM 19672]
gi|312939070|gb|ADR18262.1| AMP-dependent synthetase and ligase [Calditerrivibrio nitroreducens
DSM 19672]
Length = 606
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 144/413 (34%), Positives = 207/413 (50%), Gaps = 51/413 (12%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI-RSLYDIVPAENGDKFLSMLPPWHVYE 80
+ +D+AT +YTSGTTG PKGVMLTH+NL+ +I I + + FLS LP HV E
Sbjct: 179 VKPEDVATIIYTSGTTGFPKGVMLTHRNLMSEIFLGTKKIEIMTDKEVFLSFLPLSHVLE 238
Query: 81 RACGYFI-FSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
R+ GY+I G E+++ + + ++ P MISVP ++E +YS I + + + +
Sbjct: 239 RSVGYYIPVYNGCEIVFAENIDKVAQNILEVNPTMMISVPRLFEKIYSRIYENVHSMPSF 298
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
++ + I Y K YE +K L L +
Sbjct: 299 KKSLFHKAIEFGRWYVHKK--YE-------EKNVDTLSEL---------------KYKFY 334
Query: 199 EKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+KL++ KI+ G G VSGG L +I+ F+ AIG+ V GYGLTE+SP I P+
Sbjct: 335 DKLIFSKIRERFGNRFKGFVSGGAPLDKNINEFFWAIGIPVYEGYGLTETSPGICINCPS 394
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
+GSVG P TE KI AE E+L VRG VM+GY+KN TK+A + D
Sbjct: 395 HVRIGSVGTPFEETEFKI--AEDGEIL---------VRGPMVMKGYYKNEETTKEAFEGD 443
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
W TGDIG I R G + +++ R K+ IV S G+N+ P +E I
Sbjct: 444 -WFKTGDIGEI----------RDGYIYIVD-RKKELIVTSGGKNISPQHIENELKLDKYI 491
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
Q V G + A++VP+ E +L AK I + D S+L+K + LY E
Sbjct: 492 SQAYVHGDRKPYLVALLVPNMERLLEFAKEKGIDYLDISDLAKNPEVIKLYNE 544
>gi|114778103|ref|ZP_01452990.1| long-chain fatty-acid-CoA ligase [Mariprofundus ferrooxydans PV-1]
gi|114551521|gb|EAU54075.1| long-chain fatty-acid-CoA ligase [Mariprofundus ferrooxydans PV-1]
Length = 592
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 135/377 (35%), Positives = 199/377 (52%), Gaps = 48/377 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+D+AT +YTSGTTG+PKGVMLTH NLL + + VP D FLS LP H +ER G
Sbjct: 171 EDLATLIYTSGTTGHPKGVMLTHGNLLADVEAGIGGVPVFADDLFLSFLPASHAFERTVG 230
Query: 85 YFIFSR-GIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
+F+ S G + Y +V L D+ +P MISVP +YE +Y+G+ ++ SA V
Sbjct: 231 HFLPSACGAGIAYAESVTTLLRDMPEVRPTLMISVPRLYEKIYAGVDAKLAAGSA----V 286
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
+R L R++ +R+ G ++Q L A+ WLWA L ++LV
Sbjct: 287 SRWLFRLA------QRL--GLNRFNRRRQGDDLSAVAAWLWA------------LLDRLV 326
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
+ +++ +G +A VSGG +L I F A + V GYGLTE+SPV++ R
Sbjct: 327 HARLREKMGGRIRAFVSGGAALHPDIARFLLAADIIVLPGYGLTETSPVLSVNRQAYIKP 386
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
G+VG + E+K AE E+L V+G VMQGY++ P AT +A D DGWL
Sbjct: 387 GTVGPALPGVELKC--AEDGELL---------VKGPMVMQGYWQQPLATAEAFDADGWLR 435
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGDI I G + + R K+ +VLS GE + P +E+ + ++Q++
Sbjct: 436 TGDIVTI----------DGDGYITIMDRKKEIMVLSNGEKLSPAVIEQHIAANPCVQQVM 485
Query: 382 VIGQDQRRPGAIIVPDK 398
VI + A++V D+
Sbjct: 486 VIADQRPFVTALVVVDQ 502
>gi|253700714|ref|YP_003021903.1| AMP-dependent synthetase and ligase [Geobacter sp. M21]
gi|251775564|gb|ACT18145.1| AMP-dependent synthetase and ligase [Geobacter sp. M21]
Length = 603
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 137/407 (33%), Positives = 197/407 (48%), Gaps = 55/407 (13%)
Query: 28 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYF 86
AT +YTSGTTG PKG +LTH NL+ +R+ D V GD FLS LP HV+ER+ GY+
Sbjct: 184 ATIIYTSGTTGTPKGAVLTHGNLVFDVRATLDKVGGVGQGDLFLSFLPLSHVFERSAGYY 243
Query: 87 I-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
+ S G + + ++ + +++ P M+ VP +E +YS I + + S +R + R
Sbjct: 244 LPLSCGAAIAFADSMEKISENMMELHPTIMVCVPRFFEKIYSRIYEAVHQLSLFKRKMFR 303
Query: 145 ALIRIS--FAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
+ + +AY + Y F L+ H +A++LV
Sbjct: 304 RALAVGRRYAYARYIDKYVPFWLSLQ--------------------------HAIADRLV 337
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
+ K++S G K SGG L I+ F+ +IGV V GYGLTE+SPV+ +
Sbjct: 338 FSKLRSRFGDRLKFCASGGAPLDREINEFFWSIGVPVFEGYGLTETSPVLCSNSFDALRF 397
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
GSVG P+ TEI I G V RG QVM GYF + +AT++AL DGW
Sbjct: 398 GSVGTPLASTEIAI-----------AGDGEVLARGPQVMAGYFNDEAATREAL-VDGWFR 445
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGDIG R G L + R KD IV + G+N+ P +E R I Q
Sbjct: 446 TGDIG-----------RMEEGYLYITDRKKDLIVTAAGKNIAPQPIENLLKRDKYISQAY 494
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
V G + A++VP E +L A+ I + D +L + + LY
Sbjct: 495 VYGDRKPYLTALLVPTLERLLEFAQERKIAYHDLEDLVVHQPVIELY 541
>gi|21673982|ref|NP_662047.1| long-chain-fatty-acid-CoA ligase [Chlorobium tepidum TLS]
gi|21647127|gb|AAM72389.1| long-chain-fatty-acid--CoA ligase, putative [Chlorobium tepidum
TLS]
Length = 649
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 133/436 (30%), Positives = 218/436 (50%), Gaps = 53/436 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+AT +YTSGTTG PKGVMLTH+N+ ++S ++ + D LS LP H YER G
Sbjct: 223 DDVATLIYTSGTTGLPKGVMLTHRNICENVKSCSTVIRIDQTDSSLSFLPLSHAYERTGG 282
Query: 85 YFI-FSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y++ F+ G + + +V + ++ +P + +VP +++ + + I K + + +
Sbjct: 283 YYLMFACGARINLAESVETISLNISEAKPTIIFTVPRLFDRMKASILKSVTSEGGVKE-- 340
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
+I F + Y KQ L + +L H LA+KLV
Sbjct: 341 -----KIFFWAVSTGEKY--------HKQ----------LATGKVSPLLAVQHNLADKLV 377
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
Y KI+ G + VSGG +LP F+++IG+ + G+GLTE+SPV RP
Sbjct: 378 YSKIRKKFGGKLRYFVSGGAALPQKTGEFFQSIGITILEGFGLTETSPVTNVNRPEKVKF 437
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
G+VG P+ + E+KI G + ++G +M+GY+K+ +A+ + L DGWL
Sbjct: 438 GTVGLPVKNVEVKI-----------APDGEIMLKGPNIMKGYWKDEAASAEVL-RDGWLY 485
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGDIG + G L + R K IV S G+N+ PL++E L S + Q +
Sbjct: 486 TGDIGEVDSE----------GYLKITDRKKHIIVTSGGKNIAPLQIENLILDSPYVDQAM 535
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK---C 438
++G+ + A+IVPD ++ A I + EL K + +Y +L K S+
Sbjct: 536 IVGEKRPFLIALIVPDFLKLRDFAAEHQIKASSTKELINTKEVIEVYEKLLKSISRQLAT 595
Query: 439 SFQIGPIHVVDEPFTV 454
++ +++EPF++
Sbjct: 596 HEKVRKFLLLEEPFSI 611
>gi|300784352|ref|YP_003764643.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei U32]
gi|384147618|ref|YP_005530434.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei S699]
gi|399536237|ref|YP_006548899.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei S699]
gi|299793866|gb|ADJ44241.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei U32]
gi|340525772|gb|AEK40977.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei S699]
gi|398317007|gb|AFO75954.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei S699]
Length = 598
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 129/388 (33%), Positives = 195/388 (50%), Gaps = 53/388 (13%)
Query: 16 HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDKFLSML 73
H + + +D++AT VYTSGTTG PKGV LTH+NLL +IR+ + P E G+ L L
Sbjct: 171 HDRRREVSADELATIVYTSGTTGRPKGVELTHRNLLAEIRADIEAFPQLMEQGNSLLCFL 230
Query: 74 PPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
P HV RA + + L +T V+NL DL ++P ++++VP V+E +Y+ +++
Sbjct: 231 PLAHVLARAIAVTALTARVTLGHTPDVKNLVADLGTFRPTFVVAVPRVFEKVYNSAKQKA 290
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
+ + A ++++ K G L K
Sbjct: 291 HSEGKGKIFDAAEATAVAYSEAQDKG---GAGLGLQLK---------------------- 325
Query: 193 PLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
HL+ +KLVY K+++A+G A VSGG L + F+ IGV V GYGLTE+S
Sbjct: 326 --HLVFDKLVYGKLRAALGGRCVAAVSGGAPLGARLAHFFRGIGVPVFEGYGLTETSAAA 383
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 311
T +G+VG P+N T ++I D G V ++G V + Y+ NP ATK
Sbjct: 384 NVNTQTAFRVGTVGKPVNGTSVRIAD-----------DGEVLLKGDVVFRAYYNNPQATK 432
Query: 312 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 371
+AL DGW +TGD+G + P G L + GR K+ IV + G+NV P LE+
Sbjct: 433 EAL-TDGWFHTGDLGELDPD----------GFLKITGRKKEIIVTAGGKNVAPSGLEDTI 481
Query: 372 LRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
S L+ Q +V+G + A++ D+E
Sbjct: 482 KASPLVSQAMVVGDQRPFIAALVTVDEE 509
>gi|325105263|ref|YP_004274917.1| AMP-dependent synthetase and ligase [Pedobacter saltans DSM 12145]
gi|324974111|gb|ADY53095.1| AMP-dependent synthetase and ligase [Pedobacter saltans DSM 12145]
Length = 592
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 142/418 (33%), Positives = 211/418 (50%), Gaps = 58/418 (13%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I DD+ T +YTSGTTG PKGVMLTHKNLL I + + P E + LS LP H++ER
Sbjct: 168 ITGDDLLTLIYTSGTTGTPKGVMLTHKNLLSNIEASAKLYP-EGVTRALSFLPLSHIFER 226
Query: 82 ACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
Y F GI + Y ++ + +L +PH SVP + E +Y +
Sbjct: 227 MVVYMYFYLGISVYYAESLDTIVQNLSEVKPHCFTSVPRLLEKVYD-------------K 273
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL-LAE 199
+VA+ T K+ + L K Y + + W + L L LA
Sbjct: 274 IVAKG-----HELTGIKKSLFFWALNLGLK---YELDGANGAW--------YELQLKLAR 317
Query: 200 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
KL++KK + A+G VSGG +L + + G+KV GYGLTE+SPVI+ P
Sbjct: 318 KLIFKKWKDALGGEIMLIVSGGAALQERLARVFWGAGIKVLEGYGLTETSPVISVNGPRK 377
Query: 259 --NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 316
G+VG P+ + E+KI AE E+L +G +M+GY+K AT++A+ E
Sbjct: 378 GETKFGTVGKPLFNVEVKI--AEDGEIL---------CKGPSLMKGYYKRDDATQEAVTE 426
Query: 317 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 376
GW +TGDIG + G L + R K+ + G+ V P LE S+
Sbjct: 427 GGWFHTGDIGNLKD-----------GFLTITDRKKEVFKTAGGKYVAPQVLETKFKESTF 475
Query: 377 IRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK-EKTISLLYGELRK 433
I Q++V+G+++R P A+IVP+ E+V+ AKR I D +L+K +K I ++ E+ +
Sbjct: 476 IEQVMVLGENRRFPSALIVPNFEKVIEWAKRNQIAETDHQKLAKNQKVIDKIWSEVDR 533
>gi|448593389|ref|ZP_21652387.1| acyl-CoA synthetase [Haloferax elongans ATCC BAA-1513]
gi|445730297|gb|ELZ81887.1| acyl-CoA synthetase [Haloferax elongans ATCC BAA-1513]
Length = 667
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 133/391 (34%), Positives = 194/391 (49%), Gaps = 58/391 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY---------DIVPAENGDKF-LSMLP 74
DD+A+ +YTSGTTG PKGV LTH N + Y D P D LS LP
Sbjct: 207 DDLASLIYTSGTTGQPKGVKLTHWNFRSNVNESYRRFGPHPGRDDAPFIGPDAVALSFLP 266
Query: 75 PWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
HV+ER G+F+ F+ G + Y + L+DD Q QP SVP VYE LY I+ Q
Sbjct: 267 LAHVFERMAGHFMMFAAGATVAYAESPDTLRDDFQLVQPTTGTSVPRVYEKLYDAIRTQA 326
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
S +R+ A + + Y + P YL+ L
Sbjct: 327 SESPLKKRIFEWA-VGVGKEY-------------HTSEAPGYLLEL-------------- 358
Query: 193 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
H LA++LV+++++ A+G + + +SGGGSL + Y +G+ + GYGLTE+SPVI
Sbjct: 359 -KHQLADRLVFEQVRDALGGNMEFFISGGGSLSAELCALYHGMGLPIFEGYGLTETSPVI 417
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYFKNPSA 309
+ P +G++G+P+ + E+K+ + L G G + VRG V +GY+ P
Sbjct: 418 SVNPPEEPKIGTIGYPLRNVEVKLDKTVVGDTLGDAGGDIGELLVRGPSVTEGYWNRPEE 477
Query: 310 TKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 365
T+ A +ED W TGDI + P G L RAK +VLSTG+NV P
Sbjct: 478 TEAAFEEDDDGNRWFRTGDIVELRPD----------GYLAFRERAKQILVLSTGKNVAPG 527
Query: 366 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 396
+E+A S ++ Q +V+G ++ A+IVP
Sbjct: 528 PIEDAFASSDVVEQCMVLGDGRKFVSALIVP 558
>gi|350553696|ref|ZP_08922861.1| Long-chain-fatty-acid--CoA ligase [Thiorhodospira sibirica ATCC
700588]
gi|349790080|gb|EGZ44004.1| Long-chain-fatty-acid--CoA ligase [Thiorhodospira sibirica ATCC
700588]
Length = 604
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 140/407 (34%), Positives = 208/407 (51%), Gaps = 55/407 (13%)
Query: 11 VIAGKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFL 70
+I+G H +D +AT VYTSGTTG KGVML+H NLL + + + FL
Sbjct: 177 LISGTH------SADSLATIVYTSGTTGRSKGVMLSHYNLLFNAYACTQCADIDASEVFL 230
Query: 71 SMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGI 128
S LP H ER GY++ G E+ ++ +V+ L +DLQ +P +ISVP +YE +Y+ +
Sbjct: 231 SFLPLSHTLERTAGYYMPMMLGAEVAFSRSVQQLPEDLQAIRPTVLISVPRIYERIYAKV 290
Query: 129 QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 188
Q + S +AR L ++ T ++R R Q + + L
Sbjct: 291 QMGLEEKSP----LARKLFSLTLD-TGWQR------FERQQGRAGWHPKL---------- 329
Query: 189 AILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTES 247
+LWP LLA ++V KI + +G + VSGG LP I F+ +GV V GYG+TE+
Sbjct: 330 -LLWP--LLA-RIVAGKITARLGGRLQYAVSGGAPLPPPIAQFFIGLGVPVYHGYGMTEA 385
Query: 248 SPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNP 307
SPVI+ R N+ S+G P+ E+KI G+ V R +MQGY+ N
Sbjct: 386 SPVISVNRTDDNIPASIGTPLPGVEVKI-----------GANDEVLTRSPCIMQGYWNNA 434
Query: 308 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 367
AT++ +D +GWL+TGD H G L + GR K+ IVLS+GE V P ++
Sbjct: 435 EATREVIDAEGWLHTGDKARYDEH----------GHLYITGRIKEIIVLSSGEKVPPADM 484
Query: 368 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 414
E A L Q +V+G+ + AI+V ++E+ A+ L + D
Sbjct: 485 EMAITLDPLFEQAMVVGEGKPFLSAIVVLNEEQWPAFAQSLELDPED 531
>gi|373459321|ref|ZP_09551088.1| AMP-dependent synthetase and ligase [Caldithrix abyssi DSM 13497]
gi|371720985|gb|EHO42756.1| AMP-dependent synthetase and ligase [Caldithrix abyssi DSM 13497]
Length = 615
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 134/437 (30%), Positives = 210/437 (48%), Gaps = 54/437 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+DIAT +YTSGTTG PKGVMLT +N Q ++L + D L LP H Y+++
Sbjct: 177 EDIATIIYTSGTTGRPKGVMLTQRNFFSQFKALDPLFNFSENDIELCFLPLSHAYQKSST 236
Query: 85 YFIFSRGIELMYTAV-RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
++ S G+ + Y + + D + +P +M+ VP +YE +Y+ + + +S +R +
Sbjct: 237 HWTQSHGVTVYYCENPKEVLDCFKEVRPTFMVGVPRLYEKMYAKVFATLENASGFKRGLF 296
Query: 144 RALIRI--SFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
+ + + Y AFK+ I L H LA KL
Sbjct: 297 EWALEVGKEYQYKAFKK--------------------------ENISPYLRLKHTLARKL 330
Query: 202 VYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
V KI++ +G S GG+ L I+ F+ A G+ + GYGLTE+SPV++ RP
Sbjct: 331 VLNKIRNIMGGRLNFFSAGGAPLSSEIEEFFFAAGIFIAQGYGLTETSPVVSCNRPDQFK 390
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
G+ G +N ++KI A E+L V+G VM+GY++ P T + L DGW
Sbjct: 391 FGTPGKVVNICQVKI--APDGEIL---------VKGENVMKGYYRKPELTAEVLSPDGWF 439
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
TGDIG++ G L + R KD I+ + G+N+ P +E + I QI
Sbjct: 440 RTGDIGYLD----------SDGFLHITDRKKDIIITAGGKNIAPQPIESHIGKDYYIEQI 489
Query: 381 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK-EKTISLLYGELRKWTSKCS 439
+IG ++ A+IVP E + A++ I + SEL K EK I L + + S
Sbjct: 490 ALIGDKRKYITALIVPSFEALEEFAQKHDIKYDTLSELVKNEKVIQFYRQRLDELSKPLS 549
Query: 440 F--QIGPIHVVDEPFTV 454
+I ++ +PF+V
Sbjct: 550 AYERIKKFTLLSQPFSV 566
>gi|448312176|ref|ZP_21501926.1| AMP-dependent synthetase and ligase [Natronolimnobius
innermongolicus JCM 12255]
gi|445602683|gb|ELY56655.1| AMP-dependent synthetase and ligase [Natronolimnobius
innermongolicus JCM 12255]
Length = 654
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 140/414 (33%), Positives = 203/414 (49%), Gaps = 60/414 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNL---LHQIRSLY-------DIVPA-ENGDKFLSML 73
DD+A+ +YTSGTTG PKGV LTH N ++ +R Y D VP + K +S L
Sbjct: 206 DDLASLIYTSGTTGQPKGVQLTHWNFRSNVNAVRKRYGPRPDKADDVPTLDQESKAMSYL 265
Query: 74 PPWHVYERACGYFI-FSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P HV+ER G+F+ F+ G + Y + L++D + QP SVP VYE +Y GI++Q
Sbjct: 266 PLAHVFERTAGHFVLFASGASVAYAEDPDTLQEDFELVQPTTATSVPRVYEKIYDGIREQ 325
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
S A RR+ A + Y A IL
Sbjct: 326 ASQSDAKRRIFEWA-TDVGVQYQE----------------------------ADSPGPIL 356
Query: 192 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
LA+KLV+ ++ A+G + +SGGGSL + Y A+G+ + GYGLTE+SPV
Sbjct: 357 KAKQALADKLVFSTVREALGGEIELLISGGGSLSKELCQLYHAMGLPIYEGYGLTETSPV 416
Query: 251 IAARRPTCNVLGSVGHPINHTEIKIVDAETNE---VLPAGSKGIVKVRGSQVMQGYFKNP 307
+ P +G++G ++ ++K+ ++ N+ G G + V G V QGY+ P
Sbjct: 417 VTTNPPEAVKIGTIGPALDGVDLKVDESVANQEAFTDDPGDVGELLVSGPNVTQGYWNKP 476
Query: 308 SATKQAL--DEDG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 363
AT+ + D+DG W TGDI I P G L R K IVLSTG+NV
Sbjct: 477 GATQGSFTEDDDGTRWFRTGDIVHIRPD----------GYLEFRDRVKQIIVLSTGKNVA 526
Query: 364 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 417
P +E+A S ++ Q +V G ++ GA++VP++E V A I D SE
Sbjct: 527 PGPIEDAFAASEIVEQAMVTGDGEKFIGALLVPNEEHVRDWADEEGIDLPDDSE 580
>gi|300771404|ref|ZP_07081280.1| possible long-chain-fatty-acid--CoA ligase [Sphingobacterium
spiritivorum ATCC 33861]
gi|300762074|gb|EFK58894.1| possible long-chain-fatty-acid--CoA ligase [Sphingobacterium
spiritivorum ATCC 33861]
Length = 591
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 138/430 (32%), Positives = 216/430 (50%), Gaps = 63/430 (14%)
Query: 4 SLPILTPVIA-GKH-------YKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 55
LP L VIA GK YK + + DD+ T +YTSGTTG PKGV+LTHKN++ +
Sbjct: 142 DLPTLDDVIAFGKEQDIDLKPYK-DAVSEDDLLTLIYTSGTTGKPKGVLLTHKNVMSNVN 200
Query: 56 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYM 114
+ ++ E +K LS LP H++ER Y FSRG+++ Y + N+ D+ +P
Sbjct: 201 ASNHLLKTEY-NKALSFLPLCHIFERMVVYLYFSRGVQIYYAENLDNIVADINEVKPMAF 259
Query: 115 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 174
+VP V E +Y I ++ +AL I A + L ++P
Sbjct: 260 TTVPRVLEKVYDKIVEK-----------GKALTGIKKAL-----FFWALELGHKYQEPEK 303
Query: 175 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEA 233
A ++ +A KL++ K + A+G K VSGG +L + + A
Sbjct: 304 NGAFYNFKLG------------IARKLIFSKWKEALGGEIKLIVSGGAALQERLARVFWA 351
Query: 234 IGVKVQVGYGLTESSPVIAAR--RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 291
G++V GYGLTE+SPVIA +P G+VG +++ ++KI G G
Sbjct: 352 AGIQVLEGYGLTETSPVIAVNTWQPNGVRFGTVGKVLSNLDVKI-----------GQDGE 400
Query: 292 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 351
+ V+G + GY+KN ATK+A+DE+G+ +TGDIG ++ G L + R K
Sbjct: 401 ILVKGPSITAGYYKNQEATKEAIDEEGYFHTGDIGELSKD----------GFLKITDRKK 450
Query: 352 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 411
+ + G+ V P LE + S+LI Q++V+G++++ P A+IVP EE+ K I
Sbjct: 451 EMFKTAGGKYVAPQVLENKFMESTLIGQVMVLGENRKFPSALIVPAFEELEKWCKHKGIA 510
Query: 412 HADASELSKE 421
+ E+ K+
Sbjct: 511 YTSKDEIIKD 520
>gi|422348826|ref|ZP_16429718.1| hypothetical protein HMPREF9465_00608 [Sutterella wadsworthensis
2_1_59BFAA]
gi|404658878|gb|EKB31740.1| hypothetical protein HMPREF9465_00608 [Sutterella wadsworthensis
2_1_59BFAA]
Length = 609
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 126/398 (31%), Positives = 193/398 (48%), Gaps = 43/398 (10%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+A VYTSGTTG PKGVMLTH N++ +++ + V + GD FLS LP H +ER G
Sbjct: 185 DDLAGIVYTSGTTGRPKGVMLTHGNIVSNVKATLECVFPQVGDIFLSFLPLSHTFERTAG 244
Query: 85 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y++ + G + Y +V L DDL+ +P +ISVP VYE +++ + ++ S A R +
Sbjct: 245 YYLALATGCTIAYNRSVLLLADDLKTIRPTVIISVPRVYERIFARVHDKLKKSRPAARYL 304
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
+ I + FC + A +D L + L K+
Sbjct: 305 FDWAVEIG---------WRDFCRRNHLPVEHTGRAWLDGL-----------MRPLVRKVS 344
Query: 203 YKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
+ G + +SGG +L + + +G+ + GYG+TE+SP+IA T N
Sbjct: 345 STLLDQFGGRLRIAISGGAALSSKVARTFCGLGLPIIQGYGMTEASPIIAGNNRTLNQPN 404
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
+VG P N+ E+++ G ++++G + +GY+ P AT A EDGW T
Sbjct: 405 TVGKPFNNVEVRL-----------GEGDEIQIKGPSITRGYWNRPDATADAFTEDGWFRT 453
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD+G G+L ++GR K+ IV STGE V P +LE A L Q V
Sbjct: 454 GDVGGFNEL----------GLLSIKGRIKEIIVTSTGEKVPPADLEAAIETDPLFSQCYV 503
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 420
IG+++ I V + +E AK + AD + L
Sbjct: 504 IGENRPYLSLITVVNPDEWASFAKSCGVDPADPASLDN 541
>gi|227540636|ref|ZP_03970685.1| possible long-chain-fatty-acid--CoA ligase [Sphingobacterium
spiritivorum ATCC 33300]
gi|227239498|gb|EEI89513.1| possible long-chain-fatty-acid--CoA ligase [Sphingobacterium
spiritivorum ATCC 33300]
Length = 591
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 139/431 (32%), Positives = 216/431 (50%), Gaps = 65/431 (15%)
Query: 4 SLPILTPVIA-GKH-------YKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 55
LP L VIA GK YK + + DD+ T +YTSGTTG PKGV+LTHKN++ +
Sbjct: 142 DLPTLDDVIAFGKEQDIDLKPYK-DAVSEDDLLTLIYTSGTTGKPKGVLLTHKNVMSNVN 200
Query: 56 SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYM 114
+ ++ E +K LS LP H++ER Y FSRG+++ Y + N+ D+ +P
Sbjct: 201 ASNHLLKTEY-NKALSFLPLCHIFERMVVYLYFSRGVQIYYAENLDNIVADINEVKPMAF 259
Query: 115 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 174
+VP V E +Y I ++ +AL I A + L ++P
Sbjct: 260 TTVPRVLEKVYDKIVEK-----------GKALTGIKKAL-----FFWALELGHKYQEPEK 303
Query: 175 LVALIDWLWARIICAILWPLHL-LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 232
+ L L +A KL++ K + A+G K VSGG +L + +
Sbjct: 304 -------------NGAFYNLKLGIARKLIFSKWKEALGGEIKLIVSGGAALQERLARVFW 350
Query: 233 AIGVKVQVGYGLTESSPVIAAR--RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 290
A G++V GYGLTE+SPVIA +P G+VG +++ ++KI G G
Sbjct: 351 AAGIQVLEGYGLTETSPVIAVNTWQPNGVRFGTVGKVLSNLDVKI-----------GQDG 399
Query: 291 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 350
+ V+G + GY+KN ATK+A+DE+G+ +TGDIG ++ G L + R
Sbjct: 400 EILVKGPSITAGYYKNEEATKEAIDEEGYFHTGDIGELSKD----------GFLKITDRK 449
Query: 351 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 410
K+ + G+ V P LE + S+LI Q++V+G++++ P A+IVP EE+ K I
Sbjct: 450 KEMFKTAGGKYVAPQVLENKFMESTLIGQVMVLGENRKFPSALIVPAFEELEKWCKHKGI 509
Query: 411 VHADASELSKE 421
+ E+ K+
Sbjct: 510 AYTSKDEIIKD 520
>gi|429191224|ref|YP_007176902.1| AMP-forming long-chain acyl-CoA synthetase [Natronobacterium
gregoryi SP2]
gi|429135442|gb|AFZ72453.1| AMP-forming long-chain acyl-CoA synthetase [Natronobacterium
gregoryi SP2]
Length = 653
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 128/404 (31%), Positives = 201/404 (49%), Gaps = 55/404 (13%)
Query: 23 GSDDIATYVYTSGTTGNPKGVMLTHKNL---LHQIRSLY--------DIVPAENGDKFLS 71
G DD+A+ +YTSGTTG PKGV LTH N ++QIR D+ + +S
Sbjct: 209 GLDDLASLIYTSGTTGQPKGVELTHGNFRANVNQIRKRMAPRPDRDDDVASVDENSLTVS 268
Query: 72 MLPPWHVYERACGYFI-FSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQ 129
LP HV+ER G+F+ F+ G + Y + L++D + +P+ SVP VYE +Y I+
Sbjct: 269 YLPLAHVFERTAGHFLMFASGACVGYAEDPDTLQEDFETVEPNTATSVPRVYEKIYDAIR 328
Query: 130 KQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICA 189
+Q S+ R+ A +++ A
Sbjct: 329 EQASESAVKERIFDWATD-----------------------------VGVEYQEADTPGP 359
Query: 190 ILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESS 248
IL LA+KLV+ ++ +G + + +SGGGSL + Y A+G+ + GYGLTE++
Sbjct: 360 ILSAKQALADKLVFSTVREGLGGNLEILISGGGSLSKELCTLYHAMGLPIYEGYGLTETA 419
Query: 249 PVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYFKN 306
PV+ P +G++G + E++I ++ N+ G G + V+G V +GY+
Sbjct: 420 PVVTVNPPEEPKIGTIGPALPDVELRIDESVANQAAFDDPGEVGELLVKGPNVTEGYWDK 479
Query: 307 PSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLE 366
P AT ++ EDGW TGDI + P G + R K IVLSTG+NV P
Sbjct: 480 PGATDRSFTEDGWFKTGDIVHLRPD----------GYVEFRDRVKQLIVLSTGKNVAPGP 529
Query: 367 LEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 410
+E+A S ++ Q +V+G D++ GA++VPD + V A++ I
Sbjct: 530 IEDAFAASEVVDQAMVVGNDEKFVGALLVPDTDHVREWAEKAGI 573
>gi|448323701|ref|ZP_21513154.1| AMP-dependent synthetase and ligase [Natronobacterium gregoryi SP2]
gi|445620837|gb|ELY74324.1| AMP-dependent synthetase and ligase [Natronobacterium gregoryi SP2]
Length = 648
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 128/404 (31%), Positives = 201/404 (49%), Gaps = 55/404 (13%)
Query: 23 GSDDIATYVYTSGTTGNPKGVMLTHKNL---LHQIRSLY--------DIVPAENGDKFLS 71
G DD+A+ +YTSGTTG PKGV LTH N ++QIR D+ + +S
Sbjct: 204 GLDDLASLIYTSGTTGQPKGVELTHGNFRANVNQIRKRMAPRPDRDDDVASVDENSLTVS 263
Query: 72 MLPPWHVYERACGYFI-FSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQ 129
LP HV+ER G+F+ F+ G + Y + L++D + +P+ SVP VYE +Y I+
Sbjct: 264 YLPLAHVFERTAGHFLMFASGACVGYAEDPDTLQEDFETVEPNTATSVPRVYEKIYDAIR 323
Query: 130 KQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICA 189
+Q S+ R+ A +++ A
Sbjct: 324 EQASESAVKERIFDWATD-----------------------------VGVEYQEADTPGP 354
Query: 190 ILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESS 248
IL LA+KLV+ ++ +G + + +SGGGSL + Y A+G+ + GYGLTE++
Sbjct: 355 ILSAKQALADKLVFSTVREGLGGNLEILISGGGSLSKELCTLYHAMGLPIYEGYGLTETA 414
Query: 249 PVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYFKN 306
PV+ P +G++G + E++I ++ N+ G G + V+G V +GY+
Sbjct: 415 PVVTVNPPEEPKIGTIGPALPDVELRIDESVANQAAFDDPGEVGELLVKGPNVTEGYWDK 474
Query: 307 PSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLE 366
P AT ++ EDGW TGDI + P G + R K IVLSTG+NV P
Sbjct: 475 PGATDRSFTEDGWFKTGDIVHLRPD----------GYVEFRDRVKQLIVLSTGKNVAPGP 524
Query: 367 LEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 410
+E+A S ++ Q +V+G D++ GA++VPD + V A++ I
Sbjct: 525 IEDAFAASEVVDQAMVVGNDEKFVGALLVPDTDHVREWAEKAGI 568
>gi|193212756|ref|YP_001998709.1| AMP-dependent synthetase and ligase [Chlorobaculum parvum NCIB
8327]
gi|193086233|gb|ACF11509.1| AMP-dependent synthetase and ligase [Chlorobaculum parvum NCIB
8327]
Length = 609
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 130/438 (29%), Positives = 218/438 (49%), Gaps = 53/438 (12%)
Query: 23 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERA 82
G DD+AT +YTSGTTG PKGVMLTH+NL ++S ++ + D LS LP H YER
Sbjct: 181 GPDDVATIIYTSGTTGLPKGVMLTHRNLCENVKSCSTVIRLDETDSSLSFLPLSHAYERT 240
Query: 83 CGYFI-FSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
GY++ F+ G + + ++ + ++ +P + +VP +++ + + + K + +
Sbjct: 241 GGYYLMFACGARIYLAESIETISLNIMEAKPTIIFTVPRLFDRMKANMLKAVAKEGGLKE 300
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+ + Y ++ EG + I+ H LA+K
Sbjct: 301 KIFYWAVSTGEKY--HNQLAEG-----------------------KVSPIVNVQHKLADK 335
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LVY K++ G + VSGG +LP F+++IG+ + G+GLTE+SPV RP
Sbjct: 336 LVYHKLREKFGGRLRYFVSGGAALPQKTGEFFQSIGITILEGFGLTETSPVTNVNRPENV 395
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
G+VG P+ + E++I A+ E+L ++G +M+GY+K+ AT + + +DGW
Sbjct: 396 KFGTVGPPVKNVEVRI--AQDGEIL---------LKGPNIMKGYWKDDEATAEVI-KDGW 443
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
TGDIG I G L + R K IV S G+N+ PL +E L S + Q
Sbjct: 444 FYTGDIGEI----------DADGYLKITDRKKHIIVTSGGKNIAPLPIENLILESPYVDQ 493
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK-- 437
+V+G+ + A+IVPD +++ A I EL + K + +Y +L + S+
Sbjct: 494 TMVVGEKRPFLIALIVPDFQKLSEFASEHQITAGSNKELIEAKEVIKVYEQLLRTVSRQL 553
Query: 438 -CSFQIGPIHVVDEPFTV 454
++ +V+E F++
Sbjct: 554 ATHEKVRKFLLVEEAFSI 571
>gi|335043086|ref|ZP_08536113.1| long-chain acyl-CoA synthetase [Methylophaga aminisulfidivorans MP]
gi|333789700|gb|EGL55582.1| long-chain acyl-CoA synthetase [Methylophaga aminisulfidivorans MP]
Length = 601
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 127/397 (31%), Positives = 198/397 (49%), Gaps = 63/397 (15%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 83
+D +AT +YTSGTTG PKGVML+H N+L + ++ D FLS LP H ER
Sbjct: 182 TDQLATIIYTSGTTGKPKGVMLSHHNILSVASASLKHFKIQSNDLFLSFLPLSHTLERTA 241
Query: 84 GYFI---------FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 134
GY++ FSRGI L +D+Q+ QP +I+VP ++E +Y + + +
Sbjct: 242 GYYLPMMTGSKVAFSRGIP-------QLANDIQQLQPSALIAVPRIFERIYQRLHTNVSS 294
Query: 135 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 194
+R + +I ++Y + + R P +L+ +
Sbjct: 295 QPWYKRFLFLLTHKIGWSYFLYNQ-------QRRHWSPIFLLMPV--------------- 332
Query: 195 HLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 253
+KLV K +Q+ G + V+GG ++P H+ + +G+ + GYGLTE+SPVI+
Sbjct: 333 ---LDKLVAKNVQALFGGQLRVAVTGGAAIPHHVAEIFIGMGINLLQGYGLTETSPVISV 389
Query: 254 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 313
N SVGHPI +IKI AE +E+L V+ M GY+ N AT +
Sbjct: 390 NTLGDNQPYSVGHPIPTVKIKI--AENSELL---------VQSPGNMLGYWNNHKATAKT 438
Query: 314 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 373
+D DGWL+TGD I+ G + + GR KD +VLS GE V P ++E A
Sbjct: 439 IDSDGWLHTGDQAEISD----------TGHIFITGRIKDILVLSNGEKVSPADMEMAITS 488
Query: 374 SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 410
L Q +++G+ + A+IV + E+ L+ A++L +
Sbjct: 489 DELFEQALIVGEGKPFLSALIVLNAEQWLVLAQKLKL 525
>gi|78186834|ref|YP_374877.1| long-chain fatty-acid-CoA ligase [Chlorobium luteolum DSM 273]
gi|78166736|gb|ABB23834.1| long-chain fatty-acid-CoA ligase [Chlorobium luteolum DSM 273]
Length = 610
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 134/440 (30%), Positives = 224/440 (50%), Gaps = 54/440 (12%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+ DD+AT +YTSGTTG PKGVMLTH+NL ++S +I+ + D LS LP H YER
Sbjct: 180 VDPDDVATIIYTSGTTGLPKGVMLTHRNLCENVKSAAEIIRIDETDCSLSFLPLSHAYER 239
Query: 82 ACGYFI-FSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
GY++ F+ G + + ++ + ++ +P + +VP +++ + + +QKQI T S +
Sbjct: 240 TGGYYLLFACGASIYLAESIETVSLNITEARPTIIFTVPRLFDRIRTNMQKQISTESPLK 299
Query: 140 -RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
++ A+ R + + ++ + S L+ L H +A
Sbjct: 300 QKIFNWAVSRGEHYHRSIEK----------KGSASPLLTL---------------QHAVA 334
Query: 199 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
KLVY+K++ G + VSGG +LP F++A+G+ + G+GLTE+SP+ RP
Sbjct: 335 GKLVYQKVKKRFGGRLRYFVSGGAALPQKTGEFFQALGITILEGFGLTETSPITNVNRPE 394
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
G+VG + + E+KI AE EVL RG +M+GY+++ AT + + D
Sbjct: 395 KVKFGTVGPTVANVEMKI--AEDGEVL---------FRGPNIMKGYWQDREATAEVI-RD 442
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GW ++GDIG I G L + R K IV S G+N+ P+ +E + +
Sbjct: 443 GWFHSGDIGEI----------DGDGYLKITDRKKHIIVTSGGKNIAPMPIENLIAENPYV 492
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 437
Q++V+G+ + A+IVPD +++ A I D + L K I +Y +L + S+
Sbjct: 493 DQVMVVGEKRPFLIALIVPDFQKLREFAASAGITAPDDAGLCAHKEIVQIYEKLLRSISR 552
Query: 438 ---CSFQIGPIHVVDEPFTV 454
++ + EPFT+
Sbjct: 553 QLATHEKVRRFILAKEPFTI 572
>gi|322419627|ref|YP_004198850.1| AMP-dependent synthetase and ligase [Geobacter sp. M18]
gi|320126014|gb|ADW13574.1| AMP-dependent synthetase and ligase [Geobacter sp. M18]
Length = 603
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/413 (32%), Positives = 207/413 (50%), Gaps = 51/413 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI-RSLYDIVPAENGDKFLSMLPPWHV 78
+ I + + T +YTSGTTG PKGVML+H+N+L + ++ E G+ FLS LP HV
Sbjct: 176 DAIDPESLMTIIYTSGTTGTPKGVMLSHQNILFDVCATIRKAKVLEEGEVFLSFLPLSHV 235
Query: 79 YERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
ER+ GY++ +RG + + ++ + +++ QP M+ VP ++E ++S I + + S
Sbjct: 236 LERSTGYYLPVARGAMIAFADSIEKIAENMLEVQPTVMVCVPRLFEKIHSRIHEYVHELS 295
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
+R + + ++ I Y + I K+ +L+AL H
Sbjct: 296 LYKRKLFKTVLSIGRRYVYARYI---------DKKVPFLLAL---------------QHA 331
Query: 197 LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
+A++LV+KK++ G + K GG L I+ F+ +IGV + GYGLTE+SPV+
Sbjct: 332 VADRLVFKKLRRRFGDNLKFCSCGGAPLDREINEFFWSIGVPILEGYGLTETSPVLCNNT 391
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
GSVG P+ TE I AG G + VRG QVM GY+K+ ATK+A
Sbjct: 392 FDKLRFGSVGTPLESTEFTI----------AGD-GEILVRGPQVMLGYYKDEEATKEAF- 439
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
DGW TGDIG R LV+ R KD IV + G+N+ P +E R
Sbjct: 440 RDGWFKTGDIG-----------RLEDDFLVITDRKKDLIVTAAGKNIAPQPIENLLKRDK 488
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
+ Q V G + A++VP E++L A+ + + D +L + + LY
Sbjct: 489 YVSQAYVYGDRKPYLTALLVPTLEKLLEFAREKQLTYTDLEDLVVHEPVLELY 541
>gi|402831321|ref|ZP_10880009.1| AMP-binding enzyme [Capnocytophaga sp. CM59]
gi|402282505|gb|EJU31045.1| AMP-binding enzyme [Capnocytophaga sp. CM59]
Length = 597
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 137/448 (30%), Positives = 226/448 (50%), Gaps = 60/448 (13%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
++++ D+ T +YTSGTTGNPKGVM+ ++N+ +Q + D + G+ +S LP H
Sbjct: 172 RFDSRCMQDLYTIIYTSGTTGNPKGVMIDYENVAYQFINHDDRLAVVEGNVSMSFLPLSH 231
Query: 78 VYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
VYER ++F +G+ Y N + + L+ +PHYM VP + E +Y+ I + + S
Sbjct: 232 VYERMWVAYVFHKGVINCYLDDTNRVAEALKEVKPHYMCVVPRLLEKIYTKIYENVQKQS 291
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
+RVV RI+ +I G T+ K PS+ IL L+
Sbjct: 292 VVKRVVFATATRIA-------KIQLG--RTKKGKYPSF---------------ILKKLYN 327
Query: 197 LAEKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LA+KLV++K+++A+G + + GG+ L I F+ AIGV V +GYG+TE++ ++
Sbjct: 328 LADKLVFQKLKAALGGNIQMIPCGGALLEPSIGRFFRAIGVNVTLGYGMTETTATVSCWD 387
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
L SVG + + + KI + NE+L ++G + +GY+ NP +A
Sbjct: 388 DHKFKLKSVGTLVPYVQAKI--GQDNEIL---------LKGGSISKGYYNNPEENAKAFT 436
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
EDG+L TGD G++ G L + R K+ + S G+ + P ++E + S
Sbjct: 437 EDGYLRTGDAGYLDKE----------GNLYITERIKELMKTSNGKYIAPQQIEGKVGKDS 486
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLL 427
I QI VI ++ A+IVP+ E + AK L++ + + SEL K +K + L
Sbjct: 487 FIEQIAVIADARKYVSALIVPNYEALAEYAKSLNLKYKNYSELIKNSQIVEFFQKRLQHL 546
Query: 428 YGELRKWTSKCSFQIGPIHVVDEPFTVN 455
EL + QI ++ PF++N
Sbjct: 547 QQELAAYE-----QIKKFTLLTTPFSIN 569
>gi|448383967|ref|ZP_21562965.1| AMP-dependent synthetase and ligase [Haloterrigena thermotolerans
DSM 11522]
gi|445658956|gb|ELZ11768.1| AMP-dependent synthetase and ligase [Haloterrigena thermotolerans
DSM 11522]
Length = 652
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 136/405 (33%), Positives = 205/405 (50%), Gaps = 60/405 (14%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI---RSLYDIVPAENGDK------ 68
+ + I DD+A+ +YTSGTTG PKGV LTH N + R + P ++ D
Sbjct: 199 RIDGIDLDDLASLIYTSGTTGKPKGVQLTHWNFRSNVNGSRKRFGPRPDKDDDVPVLDEE 258
Query: 69 --FLSMLPPWHVYERACGYF-IFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETL 124
+S LP HV+ER G+F +F+ G + Y + L++D QP SVP VYE +
Sbjct: 259 SVAMSYLPLAHVFERTAGHFALFAGGTCIAYAESPDTLQEDFSTVQPTTATSVPRVYEKI 318
Query: 125 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 184
Y GI+++ SS +RR+ A + AY + + P
Sbjct: 319 YDGIREEASGSSVSRRIFEWA-TDVGVAY-------------QQAESPG----------- 353
Query: 185 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 243
AIL LA+KLV+ ++ A+G + + +SGGGSL + Y A+G+ + GYG
Sbjct: 354 ----AILKAKQALADKLVFSTVREALGGNIEILISGGGSLSPELCRLYHAMGLPIFEGYG 409
Query: 244 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE---VLPAGSKGIVKVRGSQVM 300
LTE+SP++A P +G++G +++ E+K+ +A ++ AG G + V G V
Sbjct: 410 LTETSPIVATNPPEGAKIGTIGPTLSNVEVKVDEAIADQDAFTDDAGEVGELLVNGPNVT 469
Query: 301 QGYFKNPSATKQAL--DEDG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 356
QGY+ P AT+ A D+DG W TGDI + P G L R K IVL
Sbjct: 470 QGYWNKPGATEGAFTEDDDGTRWFRTGDIIHVRPD----------GYLEFRDRVKQIIVL 519
Query: 357 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 401
STG+NV P LE+A S ++ Q +V+G ++ GA++VP+ V
Sbjct: 520 STGKNVAPGPLEDAFAASEVVEQAMVVGDGEKFIGALLVPNTNHV 564
>gi|289207858|ref|YP_003459924.1| AMP-dependent synthetase and ligase [Thioalkalivibrio sp. K90mix]
gi|288943489|gb|ADC71188.1| AMP-dependent synthetase and ligase [Thioalkalivibrio sp. K90mix]
Length = 602
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 136/445 (30%), Positives = 220/445 (49%), Gaps = 54/445 (12%)
Query: 17 YKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPW 76
+ + + + +AT VYTSGTTG PKGV+L+H+N+L + P D+FLS LP
Sbjct: 173 FHHPDLDPEAMATIVYTSGTTGRPKGVILSHRNILENAWASSQAGPLSPADRFLSFLPLS 232
Query: 77 HVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 134
H+ ER G Y G E+ + +++ L +DL +P +ISVP +YE ++ IQ +
Sbjct: 233 HMLERTAGLYMPMLIGAEVAFARSIQALGEDLVNVRPTVLISVPRIYERVHGRIQAGLKQ 292
Query: 135 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 194
S R + +A + I + ++ G+ P +L LWP
Sbjct: 293 KSGLGRALFKATVSIGWKRFEHQQGRGGWS-------PGFL---------------LWP- 329
Query: 195 HLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 253
+ E++V +K+ +G + V GG LP I F+ +G+ V GYG+TE+SPV+
Sbjct: 330 --VLERIVARKVLDRLGGELRFAVCGGAPLPPPIAQFFIGLGLPVLHGYGMTEASPVVTV 387
Query: 254 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 313
P N+ S+G P+ EI+I E +E+L R VM GY+KN AT++
Sbjct: 388 NTPDDNLPASIGKPLPGVEIRI--GEMDELL---------TRSPCVMLGYWKNEEATRET 436
Query: 314 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 373
+DEDGWL++GD + R G V + GR KD +VL+ GE V P ++E A
Sbjct: 437 IDEDGWLHSGD---------QARIDDSGHVFIT-GRIKDILVLTNGEKVPPADMEMAIAL 486
Query: 374 SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYG---E 430
+L Q++++G ++ A++VP+ E A + L ++ +LL +
Sbjct: 487 DALFDQVMIVGDNRSFLTALVVPEPEAWASFASDHDLDAETEGRLPRKAERALLQRIQYQ 546
Query: 431 LRKWTSKCSFQIGPIHVVDEPFTVN 455
LR + +I +HV E ++V+
Sbjct: 547 LRDFPGYA--KIRHVHVTHEAWSVD 569
>gi|448577228|ref|ZP_21642858.1| acyl-CoA synthetase [Haloferax larsenii JCM 13917]
gi|445727873|gb|ELZ79482.1| acyl-CoA synthetase [Haloferax larsenii JCM 13917]
Length = 667
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 131/391 (33%), Positives = 194/391 (49%), Gaps = 58/391 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY---------DIVPAENGDKF-LSMLP 74
+D+A+ +YTSGTTG PKGV L+H N + Y D P + D LS LP
Sbjct: 207 EDLASLIYTSGTTGQPKGVKLSHWNFRSNVNESYRRFGPHPGRDDAPFISSDAVALSFLP 266
Query: 75 PWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
HV+ER G+F+ F+ G + Y + L+DD Q QP SVP VYE LY I+ Q
Sbjct: 267 LAHVFERMAGHFMMFAAGATVAYAESPDTLRDDFQLVQPTTGTSVPRVYEKLYDAIRTQA 326
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
S +R+ A + + Y + P YL+ L
Sbjct: 327 SESPLKKRIFEWA-VGVGKEY-------------HTSEAPGYLLEL-------------- 358
Query: 193 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
H LA++LV+++++ A+G + + +SGGGSL + Y +G+ + GYGLTE+SPVI
Sbjct: 359 -KHQLADRLVFEQVRDALGGNMEFFISGGGSLSAELCALYHGMGLPIFEGYGLTETSPVI 417
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYFKNPSA 309
+ P +G++G+P+ + E+K+ + L G G + VRG V +GY+ P
Sbjct: 418 SVNPPEEPKIGTIGYPLRNVEVKLDKTVVGDTLGDAGGDIGELLVRGPSVTEGYWNRPEE 477
Query: 310 TKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 365
T+ A +ED W TGDI R G L RAK +VLSTG+NV P
Sbjct: 478 TESAFEEDDDGNRWFRTGDI----------VEHRPDGYLAFRERAKQIMVLSTGKNVAPG 527
Query: 366 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 396
+E+A S ++ Q +V+G ++ A+IVP
Sbjct: 528 PIEDAFASSDVVEQCMVLGDGRKFVSALIVP 558
>gi|398345391|ref|ZP_10530094.1| long-chain-fatty-acid--CoA ligase [Leptospira inadai serovar Lyme
str. 10]
Length = 645
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 207/420 (49%), Gaps = 24/420 (5%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E++ DIAT +YTSGTTG PKGV+L H++ ++ L VP D+ + LPPWH+
Sbjct: 189 ESLTGKDIATIIYTSGTTGVPKGVVLKHRSFTWSVQELQQFVPVTYSDRTVVFLPPWHIA 248
Query: 80 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
ER + S G + + V NL+ D QP ++SVP V+E LY I + +
Sbjct: 249 ERILETALLSWGASMASSNVTNLQRDFGLIQPTVLVSVPRVWEALYRKIWDTAKKGPSWK 308
Query: 140 RVVARALIRIS-FAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL---H 195
V ++I+ F + + I + T + +PS AL + + A P+ +
Sbjct: 309 FKVFSLAVKIAEFHSSLYDTITGNYATTED--EPSDQKALDKF----VALAFFGPVSLAN 362
Query: 196 LLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LL++K++ S G + G G++P I F+ ++G+ + YG+TE++ + A R
Sbjct: 363 LLSQKILQPVRASLGGRLRFAFCGAGAMPSKIQFFFRSLGIPIIETYGMTETTGMGAMGR 422
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
G++G IK++D + +G KG +G V GY+K+ +L
Sbjct: 423 FPIPKTGAIGPVFPGAHIKLLDETGTVITESGIKGTAWHKGPHVTSGYYKDEEKNTASLI 482
Query: 316 EDGWLNTGDIG-WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
D W ++GD+ W G L GRAKDTIVLS+GENVEP +E S
Sbjct: 483 -DNWFDSGDLFVWTKT-----------GELKFAGRAKDTIVLSSGENVEPEPIEAKISES 530
Query: 375 SLIRQIVVIGQDQRRPGAIIVPDKEEVLMA-AKRLSIVHADASELSKEKTISLLYGELRK 433
I+ IVV+GQD++ A+IVP+ E++ AK + +E+ T+ Y EL K
Sbjct: 531 EFIQFIVVVGQDRKFLNALIVPNFEKLREKFAKSGQTLPEANTEIVTNPTVLKFYKELLK 590
>gi|433603463|ref|YP_007035832.1| Long-chain-fatty-acid-CoA ligase FadD15 [Saccharothrix espanaensis
DSM 44229]
gi|407881316|emb|CCH28959.1| Long-chain-fatty-acid-CoA ligase FadD15 [Saccharothrix espanaensis
DSM 44229]
Length = 602
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 134/389 (34%), Positives = 198/389 (50%), Gaps = 59/389 (15%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDKFLSMLPP 75
+ E +G+DD AT VYTSGTTG PKG LTH NLL ++RS P + G+ L LP
Sbjct: 177 RREEVGADDTATIVYTSGTTGRPKGCELTHYNLLSEVRSDVAAFPQLMQAGNSLLVFLPL 236
Query: 76 WHVYERA---CGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
H+ RA CG +++R + L +T VRNL +DLQ ++P ++++VP V+E +Y+G +++
Sbjct: 237 AHILARAIALCG--VYTR-VTLGHTPDVRNLVEDLQSFRPTFVVAVPRVFEKVYNGAKQK 293
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
+A + + A + AY+ + +
Sbjct: 294 --AHAAGKGKIFDAAEATAVAYSQALDGGGAGLGLKVK---------------------- 329
Query: 192 WPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
H + KLVY K+Q+A+G A VSGG L + F+ +GV V GYGLTE+S
Sbjct: 330 ---HAVFSKLVYSKLQAALGGRCIAAVSGGAPLGARLAHFFRGVGVPVLEGYGLTETSAA 386
Query: 251 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSAT 310
T +G+VG PI T ++I AE E+L ++G V + Y+ NP+AT
Sbjct: 387 ACVNTETAFRVGTVGRPIAGTAVRI--AEDGEIL---------IKGDVVFRSYWNNPTAT 435
Query: 311 KQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA 370
+AL EDGW ++GD+G + G L + GR K+ IV + G+NV P LE+
Sbjct: 436 AEAL-EDGWFHSGDLGELDDD----------GFLRITGRKKEIIVTAGGKNVSPAVLEDR 484
Query: 371 ALRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
LI Q +V+G Q GA+I D E
Sbjct: 485 LRSHPLISQCMVVGDAQPFIGALITIDPE 513
>gi|302879073|ref|YP_003847637.1| AMP-dependent synthetase and ligase [Gallionella capsiferriformans
ES-2]
gi|302581862|gb|ADL55873.1| AMP-dependent synthetase and ligase [Gallionella capsiferriformans
ES-2]
Length = 595
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 117/364 (32%), Positives = 185/364 (50%), Gaps = 49/364 (13%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
D++A+ +YTSGTTG P+GVML+H N+L R+ D + D FLS LP H +ER G
Sbjct: 176 DELASIIYTSGTTGKPRGVMLSHGNMLSNARACLDTFSVRSEDVFLSFLPLSHTFERTLG 235
Query: 85 YF--IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y+ + + +++ L +D+Q +P +ISVP +YE +Y+ I+ ++ +R +
Sbjct: 236 YYLTVMTGATVAFARSIQTLSEDMQVIRPTLLISVPRIYERIYAVIRAKLEDGPRFKRRL 295
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
+ +A ++ R + S+L LWP + +KLV
Sbjct: 296 FYLAVETGWAMFEHQQ-------GRGPWRASFL---------------LWP---VLQKLV 330
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
+K+ +G + +SGG +L + +G+ + GYGLTE+SPVI+ N
Sbjct: 331 AQKVLDKLGGRLRVAISGGAALAAEFSRVFVGLGLPIVQGYGLTETSPVISGNHLGNNFP 390
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
SVG PI+ E+++ G+ ++VRG VM GY+ NP AT+ L DGWL
Sbjct: 391 DSVGQPISGVEVRL-----------GALSELQVRGPNVMLGYWNNPEATRATLAADGWLR 439
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGDIG I+ G + + GR K+ IV+S GE + P ++E A L L Q++
Sbjct: 440 TGDIGHISDT----------GHIYITGRIKEIIVMSNGEKIPPTDMELAILHDPLFEQVM 489
Query: 382 VIGQ 385
V G+
Sbjct: 490 VFGE 493
>gi|448725783|ref|ZP_21708221.1| AMP-dependent synthetase and ligase [Halococcus morrhuae DSM 1307]
gi|445797647|gb|EMA48109.1| AMP-dependent synthetase and ligase [Halococcus morrhuae DSM 1307]
Length = 653
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 138/430 (32%), Positives = 216/430 (50%), Gaps = 70/430 (16%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNL---LHQIRSLYDIVPAENGD--------KFLSML 73
DD+A+ +YTSGTTG PKGV ++H+N ++Q+R + P ++ D LS L
Sbjct: 207 DDLASLIYTSGTTGKPKGVKMSHRNFRANINQLRKRFGDRPDKSADLPSVGRETVALSFL 266
Query: 74 PPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P HV+ER G +F+F+ G + Y + + +D+Q QP SVP +YE ++ +++
Sbjct: 267 PLAHVFERLAGHFFLFASGATVAYAESADTVAEDIQTVQPTTATSVPRIYERIFDSMRED 326
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
S+ RR+ RA+ A KR T Q P + R+ A
Sbjct: 327 A-DSAIKRRIFERAV-------AAAKR-------TSRQDDPGRTL--------RVERA-- 361
Query: 192 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
LA++LVY ++ A+G + + +SGGGSL + ++ +G+ + GYGLTE++PV
Sbjct: 362 -----LADRLVYSTVKEAMGGNIEFFISGGGSLSPELARLFDGMGLPIYEGYGLTEAAPV 416
Query: 251 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA------GSKGIVKVRGSQVMQGYF 304
++ P G++G + E K+ DA VLPA G+ G + VRG V GY+
Sbjct: 417 VSVNPPEAPKPGTLGPALTGVETKL-DAS---VLPADQYDRDGTVGELLVRGPNVTDGYW 472
Query: 305 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 364
+NP T A ++DGWL TGDI R G V R K +VL+TG+NV P
Sbjct: 473 ENPEETDAAFEDDGWLRTGDI----------VERDGDGYFVYHERLKQLLVLTTGKNVAP 522
Query: 365 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 424
+E++ S + Q +V+G D++ A++VP+ E + A R +I EL E+
Sbjct: 523 GPIEDSFATSERVEQAMVLGDDEKFVSALVVPNFEGLRAWAARKNI------ELPSERAA 576
Query: 425 SLLYGELRKW 434
R+W
Sbjct: 577 LCRDENAREW 586
>gi|27376399|ref|NP_767928.1| long-chain-fatty-acid--CoA ligase [Bradyrhizobium japonicum USDA
110]
gi|27349539|dbj|BAC46553.1| blr1288 [Bradyrhizobium japonicum USDA 110]
Length = 619
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 126/392 (32%), Positives = 208/392 (53%), Gaps = 49/392 (12%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 80
+ DD+A VYTSGTTG PKGVML+H N++ ++++ + A D FLS LP H +E
Sbjct: 192 AVAPDDLAAIVYTSGTTGRPKGVMLSHDNVVANVKAIAHRIAASPDDVFLSFLPLSHTFE 251
Query: 81 RACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
R GY+ + G + Y +V L DDL+ +P ++SVP +YE +Y+ I + ++ +
Sbjct: 252 RTGGYYYPIAAGACVAYARSVPQLGDDLKHVRPTVLVSVPRIYERVYALIMQHRASAGS- 310
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
+ RAL+ ++ A +R + +Q ++L+D L WP L
Sbjct: 311 ---IERALLDLTIAVGG-RRF--------DARQGRGALSLLDRL--------AWP---LL 347
Query: 199 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
++LV K+ + +G + VSGG + + + A+G+ + GYG+TE+SPV++ P
Sbjct: 348 KQLVADKVLAQLGGRLRVAVSGGAPIAEPVIRLFLALGLDILQGYGMTETSPVVSVNTPE 407
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
N SVGH ++ E ++ E +E+L VRG VM GY+ P T++ + D
Sbjct: 408 DNDPRSVGHVLDGVEARL--GENDELL---------VRGPSVMLGYWHKPEETRRVKEAD 456
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GWL+TGD ++R G + + GR KD +V STGE + P++LE A L L
Sbjct: 457 GWLHTGD-----------QARIENGRITITGRIKDILVTSTGEKIAPVDLETAILADPLF 505
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 409
Q +V+G+ + A++V + + + +RL+
Sbjct: 506 EQALVVGEQRPFLAALVVLNAKAWVQEKERLA 537
>gi|291279849|ref|YP_003496684.1| long-chain fatty-acid-CoA ligase [Deferribacter desulfuricans SSM1]
gi|290754551|dbj|BAI80928.1| long-chain fatty-acid-CoA ligase [Deferribacter desulfuricans SSM1]
Length = 610
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 138/440 (31%), Positives = 213/440 (48%), Gaps = 61/440 (13%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQI---RSLYDIVPAENGDKFLSMLPPWHVYER 81
DD+AT +YTSGTTG PKGVMLTH N + +I +++ E DKFLS LP H ER
Sbjct: 181 DDLATLIYTSGTTGVPKGVMLTHYNFVSEIILGTKKVEVLKPE--DKFLSFLPLSHALER 238
Query: 82 ACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
A GY+I G ++++ ++ + +++ +P +M+SVP ++E +YS I + + S +
Sbjct: 239 AVGYYIPIYNGCQMVFAESIDKVPENMVEVKPTWMVSVPRLFEKMYSRIYENVHAMSGFK 298
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + + + Y K I + N S+ A D
Sbjct: 299 KSLFHKAVEVGKKYVEKKYIKK-----ENPGMLSFKYAFFD------------------- 334
Query: 200 KLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
KL++ KI+ G + G VSGG L +I+ F+ IG+ + GYGLTE+SP +
Sbjct: 335 KLIFSKIRERFGGNIQGFVSGGAPLDKNINEFFWVIGMPIFEGYGLTETSPGVCINTFKQ 394
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
GSVG HT K+ E E+L ++G +M+GY+KN ATK+ALDE+G
Sbjct: 395 VRFGSVGTMFEHTYAKL--DEDGELL---------LKGPMIMKGYYKNEEATKEALDEEG 443
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
W TGDIG I G L + R K+ I+ + G+N+ P +E I
Sbjct: 444 WFRTGDIGKIDED----------GFLYIVDRKKELIITAGGKNIAPQPIENELKLDKYIS 493
Query: 379 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE-------- 430
Q V G + A++VP+ E ++ AK I + D ++L + I L+ E
Sbjct: 494 QAFVYGDRKPYLVALLVPNFERIVEYAKEHHIEYFDMNDLVANEKILKLFKERVEEINKK 553
Query: 431 LRKWTSKCSFQIGPIHVVDE 450
L K+ + F + P+ E
Sbjct: 554 LPKYETIKKFSLVPVDFTIE 573
>gi|319941890|ref|ZP_08016211.1| hypothetical protein HMPREF9464_01430 [Sutterella wadsworthensis
3_1_45B]
gi|319804543|gb|EFW01413.1| hypothetical protein HMPREF9464_01430 [Sutterella wadsworthensis
3_1_45B]
Length = 613
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 144/439 (32%), Positives = 216/439 (49%), Gaps = 52/439 (11%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+A +YTSGTTG PKGVMLTH NL+ + + D V D +LS LP H +ER
Sbjct: 186 DDLAGLIYTSGTTGRPKGVMLTHANLVANVAQISDAVDITESDIYLSFLPFSHTFERTVA 245
Query: 85 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
++ + G + + +V+++++DL QP M +VP V E LY Q ++ S +
Sbjct: 246 HYAALAHGASMAFARSVQHIENDLADVQPTIMCTVPRVLERLYQKQQLELAKGSEVEQ-- 303
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQK-QPSYLVALIDWLWARIICAILWPLHLLAEKL 201
R +A A R FC +PS AL + + L +L E
Sbjct: 304 ----HRSQWAAEAGWR---RFCRDNGLPVEPSAREALDETV-----------LPVLDED- 344
Query: 202 VYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
V +K++ G KA + GG SL + ++ A+GV ++ YGLTE+SP+++ R N
Sbjct: 345 VGRKVRGLFGGRMKAILCGGASLNQSVARYFCAMGVPLRQVYGLTETSPIVSLTRAEMNH 404
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
VG P+ T++++ G + ++V+G QVMQGY+ P+ TK A EDGW
Sbjct: 405 PACVGQPVAQTQVRL-----------GDRDELQVKGPQVMQGYWNKPAETKHAFTEDGWF 453
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
+TGD ++ GG + ++GR K+ IV STGE + P++LE A L Q+
Sbjct: 454 HTGDQADLSD----------GGRVRIKGRIKEIIVTSTGEKIAPVDLEFAIQEDPLFEQV 503
Query: 381 VVIGQDQRRPGAIIV--PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKC 438
V G+++ A++V PD + L A LS D L + L +R
Sbjct: 504 FVCGENRPFISAVLVLQPDLWKALCAEMELSA--DDPQTLHDRSMLRYLVKRVRAAAKDF 561
Query: 439 -SFQIG-PIHVVDEPFTVN 455
S+ I I VVDEPFT
Sbjct: 562 PSYGIPRSIAVVDEPFTAE 580
>gi|160899186|ref|YP_001564768.1| AMP-dependent synthetase/ligase [Delftia acidovorans SPH-1]
gi|160364770|gb|ABX36383.1| AMP-dependent synthetase and ligase [Delftia acidovorans SPH-1]
Length = 647
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 134/442 (30%), Positives = 217/442 (49%), Gaps = 54/442 (12%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 83
++D+A VYTSGTTG PKGVMLTH+N++ ++++ + + D FLS LP H +ER
Sbjct: 209 AEDLAAVVYTSGTTGKPKGVMLTHRNVVSNVQAVMQRLQPRSDDVFLSFLPLSHTFERTA 268
Query: 84 GYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
GY++ + G + Y +V L +DL+ +P ++SVP +YE +++ + +
Sbjct: 269 GYYLALAVGACVAYARSVAQLAEDLKTQRPTVLVSVPRIYERVHAKVME----------T 318
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRN----QKQPSYLVALIDWLWARIICAILWPL--H 195
+ARA ++ A R ++ FC T+ Q + + WL WP+ H
Sbjct: 319 LARAPLKAQLFELAQARGWQRFCETQGIADAQAPQPEVPGWMQWL--------PWPVLNH 370
Query: 196 LLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
L+A+ L+ + G + VSGG L I + +G+ + GYG+TE+SPV+ A
Sbjct: 371 LVAKPLLAQ----FGGRVRVAVSGGAPLSPTIARCFLGLGLPLIQGYGMTETSPVVCANT 426
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
N +VGH + E++I G ++VRG VM+GY++ P T +
Sbjct: 427 LEDNHPATVGHALPGVEVRI-----------GENRELQVRGPCVMRGYWERPEDTAKTFT 475
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
+DGWL TGD I GR R ++GR K+ IV STGE + P +LE A
Sbjct: 476 DDGWLRTGDQAVI----EDGRVR-------IQGRIKEIIVTSTGEKIPPADLELAITGDP 524
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT 435
Q+ V+G+D+ A+ V ++ E A+RL + D L+ + K
Sbjct: 525 FFTQVFVVGEDRPFIAAVAVIERGEWQTMARRLGLDPEDPKSLNHSAAEREALARIEKQV 584
Query: 436 SKCSFQIGP--IHVVDEPFTVN 455
+ + P +H+ EP+T+
Sbjct: 585 ASFARYAVPRAVHLELEPWTIE 606
>gi|419802454|ref|ZP_14327641.1| AMP-binding enzyme [Haemophilus parainfluenzae HK262]
gi|419846035|ref|ZP_14369293.1| AMP-binding enzyme [Haemophilus parainfluenzae HK2019]
gi|385190316|gb|EIF37764.1| AMP-binding enzyme [Haemophilus parainfluenzae HK262]
gi|386414665|gb|EIJ29217.1| AMP-binding enzyme [Haemophilus parainfluenzae HK2019]
Length = 605
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 129/409 (31%), Positives = 208/409 (50%), Gaps = 49/409 (11%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKF-LSMLPPWHVYERAC 83
DD+ T +YTSGTTG PKGVML + NL HQ+ + +DI N D+ LS LP H++ERA
Sbjct: 177 DDLFTIIYTSGTTGEPKGVMLDYNNLAHQLEA-HDIALDVNQDEVSLSFLPFSHIFERAW 235
Query: 84 GYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
++ RG L Y N +++ L +P +M +VP YE +YS + ++ + R+++
Sbjct: 236 VAYVLHRGAILCYLENTNQVREALMEVRPTFMCAVPRFYEKIYSAVLDKVQKAPFIRQMI 295
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
I + ++ ++ L++N+K P + L +++A+KLV
Sbjct: 296 FHLAIAVG------QKRFD--LLSQNKKVPFF----------------LQKCYVIADKLV 331
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
+ K++S +G K GG L I LF+ IG+ +++GYG+TE++ ++
Sbjct: 332 FSKLRSLLGGRIKMMPCGGAKLEPSIGLFFHCIGINIKLGYGMTETTATVSCWDDHHFNP 391
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
S+G + +TE+KI E NE+L VRG VM+GY+K P T QA EDG+L
Sbjct: 392 NSIGKLMPNTEVKI--GENNEIL---------VRGGMVMKGYYKKPEETTQAFTEDGFLK 440
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD G G L + R K+ + S G+ + P +E + I QI
Sbjct: 441 TGDAGEFDAE----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIA 490
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
+I ++ A+IVP + V A++L+I + D EL K I ++ +
Sbjct: 491 IIADAKKYVSALIVPCFDSVEEYARKLNIKYQDRIELLKHSEIIKMFEQ 539
>gi|448297936|ref|ZP_21487970.1| AMP-dependent synthetase and ligase [Natronorubrum tibetense GA33]
gi|445592662|gb|ELY46848.1| AMP-dependent synthetase and ligase [Natronorubrum tibetense GA33]
Length = 652
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 142/415 (34%), Positives = 201/415 (48%), Gaps = 62/415 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY----------DIVPA-ENGDKFLSML 73
DD+A+ +YTSGTTG PKGV LTH N + ++ D VPA + + +S L
Sbjct: 206 DDLASLIYTSGTTGQPKGVQLTHWNFRSNVNAVRKRFAPRPDKPDDVPALDEESQAVSYL 265
Query: 74 PPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P HV+ER G+F+ F+ G + Y + L++D QP SVP VYE +Y I++Q
Sbjct: 266 PLAHVFERTAGHFVLFATGACVAYAESSETLQEDFSLVQPTTATSVPRVYEKIYDAIREQ 325
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
SS R+ A +++ A IL
Sbjct: 326 ASESSVKERIFEWATD-----------------------------VGVEYQRADSPGPIL 356
Query: 192 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
LA+KLV+ ++ A+G + +SGGGSL + Y A+G+ + GYGLTE+SPV
Sbjct: 357 NAKRSLADKLVFSTVREALGGEIELLISGGGSLSPELCQLYHAMGLPIYEGYGLTETSPV 416
Query: 251 IAARRPTCNVLGSVGHPINHTEIKI----VDAETNEVLPAGSKGIVKVRGSQVMQGYFKN 306
+ P +G++G + +++I VD ET P G G + V+G V QGY+
Sbjct: 417 VTTNPPEAVKIGTIGPALPGVDLRIDETVVDQETFTDDP-GEVGELLVKGPNVTQGYWNK 475
Query: 307 PSATKQAL--DEDG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 362
P AT+ A DEDG W TGDI + P G L RAK IVLSTG+NV
Sbjct: 476 PGATRSAFTEDEDGDRWFRTGDIVHLRPD----------GYLEFRDRAKQIIVLSTGKNV 525
Query: 363 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 417
P LE+A S +I Q +V+G ++ GA++VP+ E V A I D E
Sbjct: 526 APGPLEDAFAASEIIEQAMVVGDGEKFIGALLVPNTEHVRDWASEEGIDLPDDPE 580
>gi|333914694|ref|YP_004488426.1| long-chain-fatty-acid--CoA ligase [Delftia sp. Cs1-4]
gi|333744894|gb|AEF90071.1| Long-chain-fatty-acid--CoA ligase [Delftia sp. Cs1-4]
Length = 647
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 134/442 (30%), Positives = 217/442 (49%), Gaps = 54/442 (12%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 83
++D+A VYTSGTTG PKGVMLTH+N++ ++++ + + D FLS LP H +ER
Sbjct: 209 AEDLAAVVYTSGTTGKPKGVMLTHRNVVSNVQAVMQRLQPRSDDVFLSFLPLSHTFERTA 268
Query: 84 GYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
GY++ + G + Y +V L +DL+ +P ++SVP +YE +++ + +
Sbjct: 269 GYYLALAVGACVAYARSVAQLAEDLKTQRPTVLVSVPRIYERVHAKVME----------T 318
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRN----QKQPSYLVALIDWLWARIICAILWPL--H 195
+ARA ++ A R ++ FC T+ Q + + WL WP+ H
Sbjct: 319 LARAPLKAQLFELAQARGWQRFCETQGIADAQAPQPEVPGWMQWL--------PWPVLNH 370
Query: 196 LLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
L+A+ L+ + G + VSGG L I + +G+ + GYG+TE+SPV+ A
Sbjct: 371 LVAKPLLAQ----FGGRVRVAVSGGAPLSPTIARCFLGLGLPLIQGYGMTETSPVVCANT 426
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
N +VGH + E++I G ++VRG VM+GY++ P T +
Sbjct: 427 LEDNHPATVGHALPGVEVRI-----------GENRELQVRGPCVMRGYWERPEDTAKTFT 475
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
+DGWL TGD I GR R ++GR K+ IV STGE + P +LE A
Sbjct: 476 DDGWLRTGDQAVI----EDGRVR-------IQGRIKEIIVTSTGEKIPPADLELAITGDP 524
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT 435
Q+ V+G+D+ A+ V ++ E A+RL + D L+ + K
Sbjct: 525 FFTQVFVVGEDRPFIAAVAVIERGEWQAMAQRLGLDPEDPKSLNHSAAEREALARIEKQV 584
Query: 436 SKCSFQIGP--IHVVDEPFTVN 455
+ + P +H+ EP+T+
Sbjct: 585 ASFARYAVPRAVHLELEPWTIE 606
>gi|448711888|ref|ZP_21701431.1| AMP-dependent synthetase and ligase [Halobiforma nitratireducens
JCM 10879]
gi|445790973|gb|EMA41622.1| AMP-dependent synthetase and ligase [Halobiforma nitratireducens
JCM 10879]
Length = 656
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 132/409 (32%), Positives = 201/409 (49%), Gaps = 56/409 (13%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV----------PAENGD-KFLSML 73
DD+A+ +YTSGTTG PKGV LTH+N + +Y V P +GD + +S L
Sbjct: 206 DDLASLIYTSGTTGQPKGVKLTHRNFRANVNQVYRRVGPRPDKDTDTPTIDGDSRMVSYL 265
Query: 74 PPWHVYERACGYFI-FSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P HV+ER G+F+ F+ G + Y + LK+D QP SVP VYE +Y I++Q
Sbjct: 266 PLAHVFERTAGHFLPFAAGATVAYAESSDTLKEDFSAVQPTGATSVPRVYEKIYDAIREQ 325
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
S R+ A T R Y+ P IL
Sbjct: 326 ATESPIKERIFNWA--------TDVGRAYQ------RADDPG---------------PIL 356
Query: 192 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
+A+KLV+ +++ A+G + + VSGGG+L + Y +G+ + GYGLTE++PV
Sbjct: 357 EAKLSIADKLVFGQVKDALGGNIEMLVSGGGTLSPDLCTLYHGMGLPIFEGYGLTETAPV 416
Query: 251 IAARRPTCNVLGSVGHPINHTEIKIVDA---ETNEVLPAGSKGIVKVRGSQVMQGYFKNP 307
+ P +G+VG P+ E+++ D+ + AG G + VRG V +GY++ P
Sbjct: 417 VTTNPPERPQIGTVGPPVVGCEVRVDDSVVPDGEAADTAGETGELLVRGPNVAEGYWEKP 476
Query: 308 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 367
AT +A DGW TGDI I P +V R K +VLSTG+NV P +
Sbjct: 477 GATDRAFTADGWFRTGDIVTIRPDD----------YIVFHERRKQLLVLSTGKNVAPAPI 526
Query: 368 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADAS 416
E++ + Q +V+G ++ GA+IVP+ + + A+ I D++
Sbjct: 527 EDSFAAREPVEQCMVVGDGEKFVGALIVPNVDALRRLAEDEGIDLPDSA 575
>gi|448612502|ref|ZP_21662524.1| acyl-CoA synthetase [Haloferax mucosum ATCC BAA-1512]
gi|445741350|gb|ELZ92852.1| acyl-CoA synthetase [Haloferax mucosum ATCC BAA-1512]
Length = 667
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 133/393 (33%), Positives = 196/393 (49%), Gaps = 62/393 (15%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY---------DIVPAENGDKF-LSMLP 74
DD+A+ +YTSGTTG PKGV LTH N + Y VPA N D LS LP
Sbjct: 207 DDLASLIYTSGTTGQPKGVQLTHWNFRSNVNESYRRFGPRPDKGDVPAINPDAVALSFLP 266
Query: 75 PWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
HV+ER G+F+ F+ G + Y + L++D Q +P SVP VYE LY I+ Q
Sbjct: 267 LAHVFERMAGHFMMFAAGATVAYAESPDTLREDFQLVRPTTGTSVPRVYEKLYDAIRTQA 326
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
S +R+ A + + AY P YL++
Sbjct: 327 SDSPVKKRIFEWA-VGVGQAY-------------HTTDSPGYLLSA-------------- 358
Query: 193 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
H LA++LV+ +++ A+G + + +SGGGSL + Y A+G+ + GYGLTE+SPVI
Sbjct: 359 -KHRLADRLVFNQVREALGDNLEFFISGGGSLSAELCALYHAMGLPIFEGYGLTETSPVI 417
Query: 252 AARRPTCNVLGSVGHPINHTEIK----IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNP 307
P +G++G+P+ + E+K +V +T + G G + V G V GY+ P
Sbjct: 418 TVNPPEAPKIGTIGYPLRNVEVKLDTTVVGDQTGDA--GGDVGELLVHGPSVTAGYWNRP 475
Query: 308 SATKQAL--DEDG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 363
T+ A D+DG W TGD+ + P G + RAK +VLSTG+NV
Sbjct: 476 EETEAAFVEDDDGTRWFRTGDVVELRPD----------GYVTFRERAKQILVLSTGKNVA 525
Query: 364 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 396
P +E+A S ++ Q +V+G ++ A+IVP
Sbjct: 526 PGPIEDAFASSPVVEQCMVLGDGRKFVSALIVP 558
>gi|378822222|ref|ZP_09845037.1| AMP-binding enzyme [Sutterella parvirubra YIT 11816]
gi|378598964|gb|EHY32037.1| AMP-binding enzyme [Sutterella parvirubra YIT 11816]
Length = 620
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 126/415 (30%), Positives = 205/415 (49%), Gaps = 44/415 (10%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+D+A VYTSGTTGNPKGVMLTH+N+L ++ + + + LS LP H +ER
Sbjct: 189 NDLAALVYTSGTTGNPKGVMLTHRNILSNLQGVLKSIQPSESETLLSFLPLSHTFERTAS 248
Query: 85 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y++ G + ++ NL DDL+ +P ++SVP VYE ++ ++ A + +
Sbjct: 249 YYLALGLGFTCAFNRSIANLADDLKTIRPTIIMSVPRVYEMIHG----KVMDGLAKKPPM 304
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
R + + A ++R FC ++ +D A + +K V
Sbjct: 305 VRRIFNWAVA-VGWRR----FCRENGLPVEPSALSFLDPFVAGFL-----------DKKV 348
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
K ++ A G +SGG +LP ++ + A+GV + GYG+TE+SP+I+ RP N
Sbjct: 349 GKTLRDAFGDRIHLFISGGAALPTNVAKVFLALGVPIFQGYGMTETSPIISVNRPGSNHP 408
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
+VG + + E+++ D + ++VRG VM+GY+ P AT++ ED WL
Sbjct: 409 NTVGPALANIEVRLGDGDE-----------IQVRGPSVMKGYWNRPEATREIFTEDDWLR 457
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD+G I + G R + GR K+ IV STGE V P +LE A L Q +
Sbjct: 458 TGDVGEI---YKDGHIR-------ITGRIKEIIVTSTGEKVPPTDLEAAVTTDRLFTQCM 507
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTS 436
V+G D+ A+ V ++ + L + D + L K++ + ++ TS
Sbjct: 508 VVGDDRPFISALCVVNEGPWAALCEELGLDPNDPASLDKKEAKAAALRRIKAATS 562
>gi|390951964|ref|YP_006415723.1| AMP-forming long-chain acyl-CoA synthetase [Thiocystis violascens
DSM 198]
gi|390428533|gb|AFL75598.1| AMP-forming long-chain acyl-CoA synthetase [Thiocystis violascens
DSM 198]
Length = 605
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 132/375 (35%), Positives = 195/375 (52%), Gaps = 48/375 (12%)
Query: 27 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 86
+AT VYTSGTTG PKGVML+H+N+L + + ++ D FLS LP H+ ER GY+
Sbjct: 188 LATIVYTSGTTGRPKGVMLSHRNILTNVHGVVTLINVYPEDLFLSFLPLSHMLERTGGYY 247
Query: 87 --IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
I + +V L +DLQ +P MI+VP V+E +Y +Q Q+ + A R + R
Sbjct: 248 LPIMAGSCVAFARSVGQLAEDLQSIRPTVMIAVPRVFERVYQRLQDQLLSRPAPVRWLFR 307
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
+ ++ + AF R +G R P L L WL R+ A+L EKL
Sbjct: 308 --LAVATGWRAFLR-EQG----RGGWHPRLL--LWPWLRRRVGAAVL-------EKLG-- 349
Query: 205 KIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 264
G + VSGG +LP + + +G+ + GYGLTE+SPV++ NV SV
Sbjct: 350 ------GRMRVAVSGGAALPAGVAHTFIGLGLPLIQGYGLTETSPVVSFNPLRKNVPESV 403
Query: 265 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 324
G PI +++I G+ + V+G VMQGY+ N +AT + L +DGWL+TGD
Sbjct: 404 GVPIRGIQVRI-----------GADDELMVKGDNVMQGYWNNHAATAKVLTQDGWLHTGD 452
Query: 325 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 384
++R G + + GR KD +VLS GE V P +LE A + L Q++V+G
Sbjct: 453 -----------QARIEDGHIYITGRIKDILVLSNGEKVPPADLEMAIVMDPLFDQVLVLG 501
Query: 385 QDQRRPGAIIVPDKE 399
+ A++V + E
Sbjct: 502 ERHSYLSALLVLNAE 516
>gi|429191225|ref|YP_007176903.1| AMP-forming long-chain acyl-CoA synthetase [Natronobacterium
gregoryi SP2]
gi|429135443|gb|AFZ72454.1| AMP-forming long-chain acyl-CoA synthetase [Natronobacterium
gregoryi SP2]
Length = 660
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/410 (32%), Positives = 202/410 (49%), Gaps = 57/410 (13%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV-PAENGD----------KFLSML 73
DD+A+ +YTSGTTG PKGV LTH+N + +Y V P + D K +S L
Sbjct: 211 DDLASIIYTSGTTGQPKGVKLTHRNFRANVNQVYRRVGPRPDKDEETASIDGDSKMVSYL 270
Query: 74 PPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P HV+ER G+F+ F+ G + Y + LK+D QP SVP VYE +Y I++Q
Sbjct: 271 PLAHVFERTAGHFLPFAAGATVAYAESSETLKEDFGTVQPTGATSVPRVYEKIYDAIREQ 330
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
S+ R+ A TA R Y+ P IL
Sbjct: 331 ATESAVKERIFNWA--------TAVGRKYQ------RADDPG---------------PIL 361
Query: 192 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
+A+KLV+ +++ A+G + + VSGGG+L + Y +G+ + GYGLTE++PV
Sbjct: 362 EAELSIADKLVFSQVKEALGGNIELLVSGGGTLSSDLCTLYHGMGLPIYEGYGLTETAPV 421
Query: 251 IAARRPTCNVLGSVGHPINHTEIKIVDA---ETNEVLPAGSKGIVKVRGSQVMQGYFKNP 307
+ P +G+VG P+ E+ + D+ + G G + V+G V +GY++ P
Sbjct: 422 VTTNPPEEPKIGTVGPPVVDCEVTVDDSVVPDGETANTEGETGELLVKGPNVAEGYWEKP 481
Query: 308 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 367
AT +A EDGW TGDI I P + R K +VLSTG+NV P +
Sbjct: 482 EATDRAF-EDGWFRTGDIVTIRPDD----------YIEFHERRKQLLVLSTGKNVAPAPI 530
Query: 368 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 417
E+A L+ Q +V+G ++ GA+IVP+ + + A+ I D+++
Sbjct: 531 EDAFAARELVEQCLVVGDGEKFVGALIVPNVDALRRRAEDEGIDLPDSAQ 580
>gi|394990014|ref|ZP_10382846.1| hypothetical protein SCD_02439 [Sulfuricella denitrificans skB26]
gi|393790279|dbj|GAB72485.1| hypothetical protein SCD_02439 [Sulfuricella denitrificans skB26]
Length = 554
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 192/375 (51%), Gaps = 55/375 (14%)
Query: 14 GKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSML 73
G +K + + + +AT VYTSGTTG PKGVML+H+N+L + + ++V GD +S+L
Sbjct: 149 GSAFKVQDLDENLLATLVYTSGTTGRPKGVMLSHRNILSNVAAALEVVSLHPGDLLISVL 208
Query: 74 PPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P H++ER CGY++ G+ + Y ++ L +DL +P M++VP V++ + I+ Q
Sbjct: 209 PLSHMFERTCGYYVPLKAGVPVAYARSINQLAEDLAFLKPTVMVAVPRVFQRFLARIE-Q 267
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
T+S +R + + ++ + F+R R+ K L L+
Sbjct: 268 ALTASPLKRALFS--LTVALGWRKFER--------RSGKVEQALFQLL------------ 305
Query: 192 WPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
+ LV + + +G + V GG L + + + +G+ + GYGLTE+SP+
Sbjct: 306 -------QPLVAGPVLNRLGGRMRLAVVGGAPLELRVAQSFIGLGLNMLQGYGLTEASPI 358
Query: 251 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSAT 310
+A R N +VG P+ E+++ D G + VRG VM GY+ NP A+
Sbjct: 359 VAGNREYDNDPITVGAPLPGVEVRVNDV-----------GELLVRGPSVMLGYWHNPEAS 407
Query: 311 KQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA 370
+ LD DGWLNTGD+ I ++++GR KD +VLS GE V P + E A
Sbjct: 408 AEVLDADGWLNTGDLVEIPADK-----------IIIKGRTKDILVLSNGEKVSPQDAEMA 456
Query: 371 ALRSSLIRQIVVIGQ 385
L L Q++++G+
Sbjct: 457 ILDDPLFEQVMLVGE 471
>gi|448323702|ref|ZP_21513155.1| AMP-dependent synthetase and ligase [Natronobacterium gregoryi SP2]
gi|445620838|gb|ELY74325.1| AMP-dependent synthetase and ligase [Natronobacterium gregoryi SP2]
Length = 655
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/410 (32%), Positives = 202/410 (49%), Gaps = 57/410 (13%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV-PAENGD----------KFLSML 73
DD+A+ +YTSGTTG PKGV LTH+N + +Y V P + D K +S L
Sbjct: 206 DDLASIIYTSGTTGQPKGVKLTHRNFRANVNQVYRRVGPRPDKDEETASIDGDSKMVSYL 265
Query: 74 PPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P HV+ER G+F+ F+ G + Y + LK+D QP SVP VYE +Y I++Q
Sbjct: 266 PLAHVFERTAGHFLPFAAGATVAYAESSETLKEDFGTVQPTGATSVPRVYEKIYDAIREQ 325
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
S+ R+ A TA R Y+ P IL
Sbjct: 326 ATESAVKERIFNWA--------TAVGRKYQ------RADDPG---------------PIL 356
Query: 192 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
+A+KLV+ +++ A+G + + VSGGG+L + Y +G+ + GYGLTE++PV
Sbjct: 357 EAELSIADKLVFSQVKEALGGNIELLVSGGGTLSSDLCTLYHGMGLPIYEGYGLTETAPV 416
Query: 251 IAARRPTCNVLGSVGHPINHTEIKIVDA---ETNEVLPAGSKGIVKVRGSQVMQGYFKNP 307
+ P +G+VG P+ E+ + D+ + G G + V+G V +GY++ P
Sbjct: 417 VTTNPPEEPKIGTVGPPVVDCEVTVDDSVVPDGETANTEGETGELLVKGPNVAEGYWEKP 476
Query: 308 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 367
AT +A EDGW TGDI I P + R K +VLSTG+NV P +
Sbjct: 477 EATDRAF-EDGWFRTGDIVTIRPDD----------YIEFHERRKQLLVLSTGKNVAPAPI 525
Query: 368 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 417
E+A L+ Q +V+G ++ GA+IVP+ + + A+ I D+++
Sbjct: 526 EDAFAARELVEQCLVVGDGEKFVGALIVPNVDALRRRAEDEGIDLPDSAQ 575
>gi|332665277|ref|YP_004448065.1| long-chain-fatty-acid--CoA ligase [Haliscomenobacter hydrossis DSM
1100]
gi|332334091|gb|AEE51192.1| Long-chain-fatty-acid--CoA ligase [Haliscomenobacter hydrossis DSM
1100]
Length = 593
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 133/397 (33%), Positives = 197/397 (49%), Gaps = 54/397 (13%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E++ +D+AT +YTSGTTG PKGVML+H+N++ I+S ++P K LS LP H++
Sbjct: 167 ESVVENDLATIIYTSGTTGRPKGVMLSHQNIISNIKSTIALLPVNCDKKTLSFLPLSHIF 226
Query: 80 ERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ER Y + G + Y L +L+ +PHY+ +VPL+ E L I S
Sbjct: 227 ERMVIYTYVAVGASVTYAEGQEQLLSNLREVRPHYITAVPLIIERLVEQIMANSKKGSFL 286
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP-SYLVALIDWLWARIICAILWPLHLL 197
R+ + + I + Y KR QP +Y W R+ L
Sbjct: 287 RKRIIKWAIELGKNYYDSKR------------QPLAY--------WLRLS---------L 317
Query: 198 AEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR- 255
A LV+ + + G G V G +L + + A G+KV+ GYGLTE+SPVIA R
Sbjct: 318 ARILVFNRWRKMFGGRVEGIVVGAAALNPVLGRLFSAAGLKVREGYGLTETSPVIAFNRF 377
Query: 256 -PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
P + G+VG PI E++IV+ + G V+V+G VM GY++ P A+++ +
Sbjct: 378 EPGGSRFGTVGMPIPGVEVRIVNPDEE------GAGEVQVKGPNVMLGYYQQPEASREVM 431
Query: 315 DEDGWLNTGDIG-WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 373
EDGW TGD+G W+ H R L L+GR D G+ + P +E+ L
Sbjct: 432 TEDGWFRTGDVGMWV---HKR--------FLKLKGRQDDMFKTGAGKFIAPEAVEKQLLH 480
Query: 374 SSLIRQIVVIGQDQRRPGAIIVP--DKEEVLMAAKRL 408
S I Q +V G + P A+IVP DK E A+++
Sbjct: 481 SEYISQCLVAGASRPAPYALIVPRFDKLEEWCKAQKV 517
>gi|330998740|ref|ZP_08322468.1| AMP-binding enzyme [Parasutterella excrementihominis YIT 11859]
gi|329576237|gb|EGG57753.1| AMP-binding enzyme [Parasutterella excrementihominis YIT 11859]
Length = 615
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 145/447 (32%), Positives = 223/447 (49%), Gaps = 68/447 (15%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS-LYDIVPAENGDKFLSMLPPWHVYERA 82
+D+A VYTSGTTG PKGVMLTHKN++ I + LY+I P + D +LS LP H +ER
Sbjct: 188 EEDLAALVYTSGTTGKPKGVMLTHKNIMSDISALLYNIAPNPS-DTWLSFLPLSHTFERT 246
Query: 83 CGYFI---------FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 133
Y+I FSRG V + DDL+ +P M+SVP V+E + + I +++
Sbjct: 247 TSYYIGLGMGNKVTFSRG-------VARILDDLKLVRPSIMMSVPRVFEKVAAKINERLK 299
Query: 134 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
A R+V A + Y FC S + A D L
Sbjct: 300 QKGAVSRLVFNAAVDAG---------YRNFCRCNGLPVDSAVPAAFDRL----------- 339
Query: 194 LHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
+ L +KLV +I+++ G + VSGG +L + +G+++ GYG+TE+SP+I+
Sbjct: 340 MDPLYDKLVRNQIKNSFGGRMRVAVSGGAALSPEVAKTIIGLGIEIFQGYGMTETSPIIS 399
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
+ N +VG + E K+ E +E+L VRG QVM+GY+K P T +
Sbjct: 400 VNKIEANHPDTVGPILEGIEAKL--GEKDELL---------VRGPQVMRGYWKRPEDTFK 448
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
LD +GWL+TGD I P G L ++GR K+ IV STGE V P+++E+A
Sbjct: 449 TLDPEGWLSTGDQADILP----------GNYLKIKGRIKEIIVTSTGEKVPPVDIEQAIE 498
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELR 432
L Q +V G ++ ++V +K+ L++ D L+ + I + L+
Sbjct: 499 TDPLFDQAMVYGDNRPFIVGLLVLNKDNFERFVVSLNLDPKDPEILTNKAVIREI---LK 555
Query: 433 KWTSKC-SF-QIG---PIHVVDEPFTV 454
+ + C SF Q G + ++ EP+T+
Sbjct: 556 RIKTACKSFPQYGVPRSVLLLKEPWTI 582
>gi|345428592|ref|YP_004821708.1| hypothetical protein PARA_00020 [Haemophilus parainfluenzae T3T1]
gi|301154651|emb|CBW14110.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
Length = 605
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 140/441 (31%), Positives = 217/441 (49%), Gaps = 62/441 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKF-LSMLPPWHVYERAC 83
DD+ T +YTSGTTG PKGVML + NL HQ+ + +DI N D+ LS LP H++ERA
Sbjct: 177 DDLFTIIYTSGTTGEPKGVMLDYNNLAHQLEA-HDIALDVNQDEVSLSFLPFSHIFERAW 235
Query: 84 GYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
++ RG L Y N +++ L +P +M +VP YE +YS + ++ + R+++
Sbjct: 236 VAYVLHRGAILCYLEDTNQVRETLTEVRPTFMCAVPRFYEKIYSAVLDKVQKAPFIRQMI 295
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
+A ++ +E L++N+K P + L + LA+KLV
Sbjct: 296 ------FHWAIAVGQKRFE--LLSQNKKVPFF----------------LQKRYALADKLV 331
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
K++S +G K GG L I LF+ +IG+ +++GYG+TE++ I+
Sbjct: 332 LSKLRSLLGGRIKMMPCGGAKLEPTIGLFFHSIGINIKLGYGMTETTATISCWDDHHFNP 391
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
S+G + + E+KI E NE+L VRG VM+GY+K P T QA EDG+L
Sbjct: 392 NSIGKLMPNAEVKI--GENNEIL---------VRGGMVMKGYYKKPEETAQAFTEDGFLK 440
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD G G L + R K+ + S G+ + P +E + I QI
Sbjct: 441 TGDAGEFDAE----------GNLFITDRIKELMKTSNGKYIAPQYIEGKIGKDKFIEQIA 490
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRK 433
+I ++ A+IVP + V AK+L+I + D EL K EK I L EL
Sbjct: 491 IIADAKKYVSALIVPCFDSVEEYAKKLNIKYQDRMELLKHSEIIKMFEKRIESLQKELAH 550
Query: 434 WTSKCSFQIGPIHVVDEPFTV 454
+ Q+ ++ + F+V
Sbjct: 551 FE-----QVKKFTLLSQAFSV 566
>gi|381162311|ref|ZP_09871541.1| AMP-forming long-chain acyl-CoA synthetase [Saccharomonospora
azurea NA-128]
gi|379254216|gb|EHY88142.1| AMP-forming long-chain acyl-CoA synthetase [Saccharomonospora
azurea NA-128]
Length = 598
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/388 (32%), Positives = 195/388 (50%), Gaps = 53/388 (13%)
Query: 16 HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDKFLSML 73
H + + + +DD+AT VYTSGTTG PKGV+LTH+NLL ++R+ P G+ L L
Sbjct: 171 HTRRKAVQADDMATIVYTSGTTGRPKGVVLTHRNLLAEVRADIKAFPKLMGAGNSLLLFL 230
Query: 74 PPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
P H+ RA + + L +TA ++ L +DL ++P ++++VP V+E +Y+G + +
Sbjct: 231 PLAHILARAIAITAITSRVTLGHTADIKELVNDLGTFRPTFVVAVPRVFEKVYNGAKLKA 290
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
T + + A + + + PS+ + +
Sbjct: 291 HTGGKGK------------IFDAAEATAVAYSQALDTGGPSFGLRV-------------- 324
Query: 193 PLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
H + KLVY K+Q+A+G A VSGG L + F+ IGV V GYGLTE+S
Sbjct: 325 -KHAVFSKLVYSKLQAALGGRCVAAVSGGAPLGARLAHFFRGIGVPVFEGYGLTETSAAA 383
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 311
+G+VG P+ T ++I AE EVL ++G V Y+ NP AT+
Sbjct: 384 NVNTEDAFKVGTVGKPVAGTSVRI--AEDGEVL---------LKGDVVFTRYWNNPEATR 432
Query: 312 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 371
++L EDGW +TGDIG + G L + GR K+ IV + G+NV P LE+A
Sbjct: 433 ESL-EDGWFHTGDIGEL----------DADGFLKITGRKKEIIVTAGGKNVAPSGLEDAL 481
Query: 372 LRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
LI Q +V+G + GA++ D+E
Sbjct: 482 KADPLISQAMVVGDQRPFIGALVTIDEE 509
>gi|448737723|ref|ZP_21719758.1| acyl-CoA synthetase [Halococcus thailandensis JCM 13552]
gi|445803279|gb|EMA53577.1| acyl-CoA synthetase [Halococcus thailandensis JCM 13552]
Length = 643
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 134/423 (31%), Positives = 214/423 (50%), Gaps = 57/423 (13%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAEN-GD--------KFLSMLP 74
DD+A+ VYTSGTTG PKGV LTH+N + +Y P E+ GD LS LP
Sbjct: 206 DDLASLVYTSGTTGQPKGVRLTHRNFKANVDQVYRRFGPREDKGDLPTIDPDVSTLSFLP 265
Query: 75 PWHVYERACGYFI-FSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
HV+ER G+F+ F+ G + Y + L++D P SVP VYE LY I++Q
Sbjct: 266 LAHVFERLAGHFLMFAAGASVAYAESPDTLQEDFPLVTPSTGTSVPRVYEKLYDSIREQA 325
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
+ SA R + + + Y +R G L +
Sbjct: 326 -SESALRERIFEWAVDVGREYQ--ERESPGLSLRAKRA---------------------- 360
Query: 193 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
LA++LV+++++ +G + + +SGGGSL + ++ +G+ + GYGLTE++PV+
Sbjct: 361 ----LADRLVFEQVREGVGGNIEFFISGGGSLSPELGRLFDGMGLPILEGYGLTETAPVV 416
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAET--NEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
A P +G++G P+ E+K VDA +++ G G + VRG V GY++NP A
Sbjct: 417 AVNPPEAPEIGTIGPPVVDEEVK-VDASVVPDDLDADGEVGELLVRGPNVTDGYWENPEA 475
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T+ + D + W TGD+ RR G + R+K +VLSTG+NV P +E+
Sbjct: 476 TEDSFDGN-WFRTGDV----------VERRPDGYIAFRERSKQLLVLSTGKNVAPGPIED 524
Query: 370 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLY 428
A + L+ Q +V+G ++ ++VP++E V A+ I + D+S L + + +
Sbjct: 525 AFAQRQLVEQCMVLGDGEKFVSGLVVPNEERVRKWAREEGIDLPDDSSALCQNEHVQARI 584
Query: 429 GEL 431
GE+
Sbjct: 585 GEV 587
>gi|303257838|ref|ZP_07343848.1| AMP-dependent synthetase and ligase [Burkholderiales bacterium
1_1_47]
gi|302859441|gb|EFL82522.1| AMP-dependent synthetase and ligase [Burkholderiales bacterium
1_1_47]
Length = 615
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 145/447 (32%), Positives = 223/447 (49%), Gaps = 68/447 (15%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS-LYDIVPAENGDKFLSMLPPWHVYERA 82
+D+A VYTSGTTG PKGVMLTHKN++ I + LY+I P + D +LS LP H +ER
Sbjct: 188 EEDLAALVYTSGTTGKPKGVMLTHKNIMSDISALLYNIAPNPS-DTWLSFLPLSHTFERT 246
Query: 83 CGYFI---------FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 133
Y+I FSRG V + DDL+ +P M+SVP V+E + + I +++
Sbjct: 247 TSYYIGLGMGNKVTFSRG-------VARILDDLKLVRPSIMMSVPRVFEKVAAKINERLK 299
Query: 134 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
A R+V A + Y FC S + A D L
Sbjct: 300 QKGAVSRLVFNAAVDAG---------YRNFCRCNGLPVDSAVPAAFDRL----------- 339
Query: 194 LHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
+ L +KLV +I+++ G + VSGG +L + +G+++ GYG+TE+SP+I+
Sbjct: 340 MDPLYDKLVRNQIKNSFGGRMRVAVSGGAALSPEVAKTIIGLGIEIFQGYGMTETSPIIS 399
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
+ N +VG + E K+ E +E+L VRG QVM+GY+K P T +
Sbjct: 400 VNKIGANHPDTVGPILEGIEAKL--GEKDELL---------VRGPQVMRGYWKRPEDTFK 448
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
LD +GWL+TGD I P G L ++GR K+ IV STGE V P+++E+A
Sbjct: 449 TLDPEGWLSTGDQADILP----------GNYLKIKGRIKEIIVTSTGEKVPPVDIEQAIE 498
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELR 432
L Q +V G ++ ++V +K+ L++ D L+ + I + L+
Sbjct: 499 TDPLFDQAMVYGDNRPFIVGLLVLNKDNFERFVVSLNLDPKDPEILTNKAVIREI---LK 555
Query: 433 KWTSKC-SF-QIG---PIHVVDEPFTV 454
+ + C SF Q G + ++ EP+T+
Sbjct: 556 RIKTACKSFPQYGVPRSVLLLKEPWTI 582
>gi|325577823|ref|ZP_08148098.1| long-chain-fatty-acid--CoA ligase [Haemophilus parainfluenzae ATCC
33392]
gi|325160568|gb|EGC72694.1| long-chain-fatty-acid--CoA ligase [Haemophilus parainfluenzae ATCC
33392]
Length = 605
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 131/409 (32%), Positives = 207/409 (50%), Gaps = 49/409 (11%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKF-LSMLPPWHVYERAC 83
DD+ T +YTSGTTG PKGVML + NL HQ+ + +DI N D+ LS LP H++ERA
Sbjct: 177 DDLFTIIYTSGTTGEPKGVMLDYSNLAHQLEA-HDIALDVNQDEVSLSFLPFSHIFERAW 235
Query: 84 GYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
++ RG L Y N +++ L +P +M +VP YE +YS + ++ + R+++
Sbjct: 236 VAYVLHRGAILCYLEDTNQVREALTEVRPTFMCAVPRFYEKIYSAVLDKVQKAPFIRQMI 295
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
+A ++ ++ L++N+K P + L + LA+KLV
Sbjct: 296 ------FHWAIAVGQKRFD--LLSQNKKVPFF----------------LQKRYALADKLV 331
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
K++S +G K GG L I LF+ +IG+ +++GYG+TE++ ++
Sbjct: 332 LSKLRSLLGGRIKMMPCGGAKLEPTISLFFHSIGINIKLGYGMTETTATVSCWDDHHFNP 391
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
S+G + + E+KI E NE+L VRGS VM+GY+K P T QA EDG+L
Sbjct: 392 SSIGKLMPNAEVKI--GENNEIL---------VRGSMVMKGYYKKPEETAQAFTEDGFLK 440
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD G G L + R K+ + S G+ + P +E + I QI
Sbjct: 441 TGDAGEFDAE----------GNLFITDRIKELMKTSNGKYIAPQYIEGKIGKDKFIEQIA 490
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
+I ++ A+IVP + V AK+L+I + D EL K I ++ +
Sbjct: 491 IIADAKKYVSALIVPCFDSVEEYAKKLNIKYQDRMELLKHSEIIKMFEQ 539
>gi|374623848|ref|ZP_09696345.1| AMP-dependent synthetase and ligase [Ectothiorhodospira sp. PHS-1]
gi|373942946|gb|EHQ53491.1| AMP-dependent synthetase and ligase [Ectothiorhodospira sp. PHS-1]
Length = 606
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 133/399 (33%), Positives = 195/399 (48%), Gaps = 49/399 (12%)
Query: 27 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG-Y 85
+AT VYTSGTTG KGVML+H N+L + P D FLS LP H ER G Y
Sbjct: 186 LATIVYTSGTTGRSKGVMLSHHNILSNAHASQQCAPMGADDLFLSFLPLSHTLERTAGCY 245
Query: 86 FIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
G ++ Y +++ L +DL +P MISVP +YE +Y I + S R +
Sbjct: 246 MPMMVGAQVAYARSIQGLAEDLLTLRPTVMISVPRIYERIYGRINAGLEEKSPLARKLFL 305
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
+ I + ++ G+ P L LWP + +K+V
Sbjct: 306 TTVNIGWRRFEHQQGRAGW-------HPGLL---------------LWP---VLKKIVAD 340
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K+ S +G + V GG LP I F+ +G+ V G+G+TE+SPV++ RP N+ S
Sbjct: 341 KVTSRLGGRLRYAVCGGAPLPPPIARFFIGLGLPVFHGFGMTEASPVVSVNRPDDNLPAS 400
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
VG P+ E+KI D +E+L VRG VMQGY+ N AT++ +D DGWL++G
Sbjct: 401 VGAPLPGVEVKIGD--DDELL---------VRGPSVMQGYWNNEEATRETIDADGWLHSG 449
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D + R G + ++ GR K+ +VL GE V P ++E A + Q +V+
Sbjct: 450 D---------KARFNEQGHIFII-GRIKEILVLGNGEKVPPADMEMAITLDPVFEQALVL 499
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 422
G+ + A++V + EE AK L + DA L K
Sbjct: 500 GEGKAYLSALVVLNPEEWEKLAKTLEVDPRDAEVLRSRK 538
>gi|345302941|ref|YP_004824843.1| Long-chain-fatty-acid--CoA ligase [Rhodothermus marinus
SG0.5JP17-172]
gi|345112174|gb|AEN73006.1| Long-chain-fatty-acid--CoA ligase [Rhodothermus marinus
SG0.5JP17-172]
Length = 632
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 128/380 (33%), Positives = 189/380 (49%), Gaps = 56/380 (14%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNL----LHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
D+AT +YTSGTTG PKGVML+H+N+ L + P +G+ LS LP HV+ R
Sbjct: 199 DLATIIYTSGTTGRPKGVMLSHENISFNALTSFSGIKQYRPGPDGEVALSFLPLTHVFAR 258
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y + +T L+D L++ +P +VP V E +Y + ++ T +
Sbjct: 259 TLFYGYLYYATSVYFTTPDALRDALRQVRPTTFATVPRVLEKIYGALVERAATMPGLKGR 318
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL-LAEK 200
+ R + ++ R YE L R + L+ L L +A++
Sbjct: 319 IFRWALDLA-------RRYE---LGREPRG-------------------LYRLQLAVADR 349
Query: 201 LVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LVY+K + A+G A + +GG +L + + A G+ + GYGLTE+SPVI RP N
Sbjct: 350 LVYRKWREALGGRIAFIIAGGAALSAELANIFAAAGIPILQGYGLTETSPVITYNRPELN 409
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
G+VG PI E+KI AE E+L RG VM GY+K+P T++ +DE+GW
Sbjct: 410 RAGTVGVPIPGVEVKI--AEDGEIL---------TRGPHVMLGYYKDPERTREVIDEEGW 458
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
+TGDIG+ G LV+ R KD LSTG+ V P LE+ L+ Q
Sbjct: 459 FHTGDIGYFTEE----------GFLVITDRKKDLFKLSTGKYVMPQPLEQRLTADPLVEQ 508
Query: 380 IVVIGQDQRRPGAIIVPDKE 399
+V+G + A+I PD+E
Sbjct: 509 ALVVGPGYKFTAALIFPDEE 528
>gi|429748961|ref|ZP_19282118.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 332 str. F0381]
gi|429169511|gb|EKY11261.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 332 str. F0381]
Length = 599
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/415 (31%), Positives = 214/415 (51%), Gaps = 48/415 (11%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+ T +YTSGTTG PKGVMLT++NL Q+ + + ++ D L LP HV+ERA
Sbjct: 181 DDLFTIIYTSGTTGQPKGVMLTYENLAFQMVGHSERLAVDDSDSSLCFLPLSHVFERAWT 240
Query: 85 YFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
F + + + Y + N +++ L +P M +VP YE +++ + + SS +RV+
Sbjct: 241 CFCLYKCVPVYYLSDTNKVREALAEVRPTLMCAVPRFYEKIFATVHDRADASSFVKRVLF 300
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
+A ++ A K E +PS+ WL + L +KLVY
Sbjct: 301 KAAVKTGKRMIALKEANE---------KPSF------WLQQT---------YNLFDKLVY 336
Query: 204 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K++ A+G K GG +L I F+++IG+ V++GYG+TE++ I+ L
Sbjct: 337 SKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINVKLGYGMTETTATISCWGDDKFDLQ 396
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
SVG + + +I+I E NE+L V+G VM+GY+KNP T + DG+L T
Sbjct: 397 SVGEVMPNVQIRI--GEENEIL---------VKGGMVMKGYYKNPEETAKVFTNDGYLRT 445
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD G + +++ V + E R K+ + S G+ + P +E + +LI QI V
Sbjct: 446 GDAGNLDGNNN---------VFITE-RIKELMKTSNGKYIAPQHIEGKVGKYTLIEQIAV 495
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS 436
I +R A+IVP+ E + K L+I + + ++L K+ + I + +L+K+ S
Sbjct: 496 IADGKRFVSALIVPNFEALSQVMKELNIKYKNTADLLKQSQVIEYISKQLQKFQS 550
>gi|345865361|ref|ZP_08817547.1| long-chain-fatty-acid--CoA ligase [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345123530|gb|EGW53424.1| long-chain-fatty-acid--CoA ligase [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 593
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 142/458 (31%), Positives = 221/458 (48%), Gaps = 59/458 (12%)
Query: 2 LFSLPILTPVIAGKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 61
L L P AGK Y+ + ++ +AT VYTSGTTG PKGVML+H+N+L I + ++
Sbjct: 158 LLHLDAWLPATAGK-YQAVDLDTNALATIVYTSGTTGRPKGVMLSHRNILWDIEAGLKLI 216
Query: 62 PAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPL 119
+ D FLS LP H ER GY++ G + Y ++ L +DLQ+ +P +I+VP
Sbjct: 217 DVFSNDLFLSFLPLSHALERTVGYYLPIVAGSRVAYARSIPELAEDLQQLRPTVLIAVPR 276
Query: 120 VYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 179
++E +Y+ + + +R + + ++ + +++ R P L
Sbjct: 277 IFERIYNKLMSALDEGPTLKRKLFESAVQTGWQNFNYQQ-------GRAHWSPRLLG--- 326
Query: 180 DWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKV 238
WP L E+LV KK+Q +G + VSGG L I + +GV +
Sbjct: 327 ------------WP---LLERLVAKKLQQRLGGRLRIAVSGGAPLTAEIARTFVGLGVPI 371
Query: 239 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 298
GYGLTE+SP+IA N+ SVG + E +I G ++VR
Sbjct: 372 LQGYGLTETSPIIAENTHADNIPDSVGLILPGIEARI-----------GENDELQVRSPT 420
Query: 299 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 358
VM GY+ NP AT + +D DGWL+TGD I +H L + GR K+ IVL+
Sbjct: 421 VMLGYWNNPQATAETIDPDGWLHTGDKVKIEQNH-----------LFITGRIKEIIVLAN 469
Query: 359 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 418
GE V P ++E L Q++VIG+ + A++V + ++ + + D + L
Sbjct: 470 GEKVPPADMEMCIALDPLFEQVLVIGEGRPYLSAMVVLNPKQCEHEGIDIENLSVDGA-L 528
Query: 419 SKE--KTISLLYGELRKWTSKCSFQIGPIHVVDEPFTV 454
+K + IS G + QI + V+DEP+TV
Sbjct: 529 NKRLLERISSHLGSFPGYA-----QIRRLAVIDEPWTV 561
>gi|345877498|ref|ZP_08829243.1| DNA polymerase III subunit delta' [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344225466|gb|EGV51824.1| DNA polymerase III subunit delta' [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 619
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 142/458 (31%), Positives = 221/458 (48%), Gaps = 59/458 (12%)
Query: 2 LFSLPILTPVIAGKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 61
L L P AGK Y+ + ++ +AT VYTSGTTG PKGVML+H+N+L I + ++
Sbjct: 184 LLHLDAWLPATAGK-YQAVDLDTNALATIVYTSGTTGRPKGVMLSHRNILWDIEAGLKLI 242
Query: 62 PAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPL 119
+ D FLS LP H ER GY++ G + Y ++ L +DLQ+ +P +I+VP
Sbjct: 243 DVFSNDLFLSFLPLSHALERTVGYYLPIVAGSRVAYARSIPELAEDLQQLRPTVLIAVPR 302
Query: 120 VYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 179
++E +Y+ + + +R + + ++ + +++ R P L
Sbjct: 303 IFERIYNKLMSALDEGPTLKRKLFESAVQTGWQNFNYQQ-------GRAHWSPRLLG--- 352
Query: 180 DWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKV 238
WP L E+LV KK+Q +G + VSGG L I + +GV +
Sbjct: 353 ------------WP---LLERLVAKKLQQRLGGRLRIAVSGGAPLTAEIARTFVGLGVPI 397
Query: 239 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 298
GYGLTE+SP+IA N+ SVG + E +I G ++VR
Sbjct: 398 LQGYGLTETSPIIAENTHADNIPDSVGLILPGIEARI-----------GENDELQVRSPT 446
Query: 299 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 358
VM GY+ NP AT + +D DGWL+TGD I +H L + GR K+ IVL+
Sbjct: 447 VMLGYWNNPQATAETIDPDGWLHTGDKVKIEQNH-----------LFITGRIKEIIVLAN 495
Query: 359 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 418
GE V P ++E L Q++VIG+ + A++V + ++ + + D + L
Sbjct: 496 GEKVPPADMEMCIALDPLFEQVLVIGEGRPYLSAMVVLNPKQCEHEGIDIENLSVDGA-L 554
Query: 419 SKE--KTISLLYGELRKWTSKCSFQIGPIHVVDEPFTV 454
+K + IS G + QI + V+DEP+TV
Sbjct: 555 NKRLLERISSHLGSFPGYA-----QIRRLAVIDEPWTV 587
>gi|373457238|ref|ZP_09549005.1| AMP-dependent synthetase and ligase [Caldithrix abyssi DSM 13497]
gi|371718902|gb|EHO40673.1| AMP-dependent synthetase and ligase [Caldithrix abyssi DSM 13497]
Length = 652
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 211/408 (51%), Gaps = 56/408 (13%)
Query: 19 YETIGSDDIATYVYTSGTTGNPKGVMLTHKNLL---HQIRSLYDIVPAENGDKFLSML-P 74
++ I DD AT +Y+SGTT +PKGV+L+HKN + Q ++ DI P F+++L
Sbjct: 173 WQAIEEDDYATIMYSSGTTADPKGVILSHKNYVVNTEQSLTVMDIPPY-----FVTLLIL 227
Query: 75 PW-HVYERACG-YFIFSRGIEL--------MYTAVRNLKDDLQRYQPHYMISVPLVYETL 124
PW H + G Y + G + ++N+ +L+ +PH+++SVP + +
Sbjct: 228 PWDHAFAHTVGLYTLIKNGASMAAVQSGKTQLETLKNIPKNLKEIRPHFLLSVPALAKNF 287
Query: 125 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 184
I+K I A + + ++I++ Y EG W
Sbjct: 288 RKNIEKAIRDKGKATERLFQQALKIAYLYNG-----EG------------------WNKG 324
Query: 185 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSL-PMHIDLFYEAIGVKVQVGYG 243
+ + PL+ L +K++++KI+ + G GGG+L + + F+ AIG+ + GYG
Sbjct: 325 KGFRKVYKPLYALYDKVLFRKIRDSFGGRLQFFIGGGALLDIEMQRFFYAIGIPMFQGYG 384
Query: 244 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 303
LTE++PVI++ +P + LG+ G + E+KIVD NE LP G +G + V+G VM GY
Sbjct: 385 LTEAAPVISSNKPHEHKLGTSGKVLKGMEVKIVDERGNE-LPTGQRGEICVKGENVMVGY 443
Query: 304 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 363
+KNP+AT+ AL DGWL+TGD+G++ G L + GR K ++ + GE
Sbjct: 444 WKNPTATENAL-RDGWLHTGDLGYLDEE----------GYLYVLGREKSLLIGNDGEKYS 492
Query: 364 PLELEEAAL-RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 410
P +EEA L S I QI++ A++VP+K V+ A+ ++
Sbjct: 493 PEGIEEAILDHSPYIDQIMLYNNQSPYTIALVVPNKAAVIEWARENNV 540
>gi|350561455|ref|ZP_08930293.1| AMP-dependent synthetase and ligase [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349780487|gb|EGZ34805.1| AMP-dependent synthetase and ligase [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 604
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/376 (34%), Positives = 185/376 (49%), Gaps = 47/376 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
D +AT VYTSGTTG PKGVML+H+ LL + P D FLS LP H ER G
Sbjct: 182 DHLATIVYTSGTTGRPKGVMLSHRALLFNAHAASQCAPLGGEDVFLSFLPLSHTLERTAG 241
Query: 85 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
YF+ + G E+ + ++ L +DL+ QP ++SVP +YE++Y+ IQ + A R +
Sbjct: 242 YFLPMAVGAEVAFARSIAQLAEDLRVVQPTVLVSVPRIYESVYAKIQAGLKQKPAFARRL 301
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
+A + +A + + G+ + AR + L L +L
Sbjct: 302 FQATVNTGWARFEYLQRRAGWSPRLLLWPLLRRLV------ARQV------LERLGGRLE 349
Query: 203 YKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
Y V GG LP I F+ +G+ V GYGLTE+SPV+ RP N+
Sbjct: 350 Y------------AVCGGAPLPPPIARFFIGLGLPVYHGYGLTEASPVVTVNRPDDNLPA 397
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G P+ EI+I E +E+L R VM GY++N AT A+D DGWL+T
Sbjct: 398 SIGKPLPGVEIRI--GEQDELL---------TRSPSVMLGYWRNDEATAAAIDSDGWLHT 446
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD +R R G + + GR KD IVL GE V P ++E A L Q++V
Sbjct: 447 GD-------KARVDDR---GFVFITGRIKDIIVLGNGEKVPPADMEMAIQLDPLFDQVLV 496
Query: 383 IGQDQRRPGAIIVPDK 398
IG+ + A++V D
Sbjct: 497 IGEARPFLSALVVLDD 512
>gi|313205365|ref|YP_004044022.1| amp-dependent synthetase and ligase [Paludibacter propionicigenes
WB4]
gi|312444681|gb|ADQ81037.1| AMP-dependent synthetase and ligase [Paludibacter propionicigenes
WB4]
Length = 587
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 126/382 (32%), Positives = 196/382 (51%), Gaps = 57/382 (14%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 80
+I DD+AT +YTSGTTG+ KGVML+H+N++ Q++SL + +PA+ +K LS LP H YE
Sbjct: 169 SIKPDDLATIIYTSGTTGSQKGVMLSHQNIVSQLKSL-ESIPAKWSNKALSFLPLCHAYE 227
Query: 81 RACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
R Y G+ + Y ++ + ++++ P M VP + E +Y +++ S
Sbjct: 228 RMLVYLYQYLGMSVYYAESLGTIAENIKEINPTMMSCVPRLLEKIYD----KLYLSGKKL 283
Query: 140 RVVARALIRISFAY-TAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
++ + +F T F+ G+ K LA
Sbjct: 284 PFFSKIIYYWAFNLATKFQLEEMGWYYNIKYK--------------------------LA 317
Query: 199 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA--RR 255
EKL+Y K ++AIG + VSGG ++ HI F+ AIG+ V GYGL+E+SPVIA R
Sbjct: 318 EKLIYSKWRAAIGGNFDIVVSGGSAIQPHIASFFSAIGMPVFEGYGLSETSPVIAVSQRG 377
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
G+VG P+ E+K+ AE +E++ RG VM GY+K+P+ T QA+D
Sbjct: 378 ENGRKFGTVGLPLQGVEVKL--AERDEII---------CRGHNVMLGYYKDPALTAQAID 426
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
DGW +TGD G P G L++ GR K S G+ V P +E S+
Sbjct: 427 NDGWFHTGDTGKFTPE----------GQLIITGRLKSIFKTSFGKYVNPQAIESRFTESA 476
Query: 376 LIRQIVVIGQDQRRPGAIIVPD 397
I ++V+G++++ A++ PD
Sbjct: 477 FIENMIVLGENKKFAAALLSPD 498
>gi|448303788|ref|ZP_21493734.1| AMP-dependent synthetase and ligase [Natronorubrum sulfidifaciens
JCM 14089]
gi|445592415|gb|ELY46602.1| AMP-dependent synthetase and ligase [Natronorubrum sulfidifaciens
JCM 14089]
Length = 648
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 126/392 (32%), Positives = 195/392 (49%), Gaps = 56/392 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY----------DIVPAENGDKF-LSML 73
DD+A+ +YTSGTTG PKGV LTH N + ++ + P+ + + +S L
Sbjct: 206 DDLASLIYTSGTTGRPKGVQLTHWNFRSNVNAVRKRFAPRPDKPEGTPSLDEESLAVSYL 265
Query: 74 PPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P HV+ER G+F+ F+ G + Y + L+ D QP SVP VYE +Y I++Q
Sbjct: 266 PLAHVFERTAGHFVLFASGACVAYAESPDTLQADFSAVQPTTATSVPRVYEKIYDAIREQ 325
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
S A +R+ A +++ A +L
Sbjct: 326 ASESGAKKRIFEWATD-----------------------------VGVEYQQADSPGVVL 356
Query: 192 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
LA+KLV+ ++ A+G + +SGGGSL + Y A+G+ + GYGLTE+SPV
Sbjct: 357 NAKRKLADKLVFSTVREALGGEIELLISGGGSLSTDLCQLYHAMGLPIYEGYGLTETSPV 416
Query: 251 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA---GSKGIVKVRGSQVMQGYFKNP 307
++ P +G++G+P+ +++I + ++ A G G + V+G V QGY+ P
Sbjct: 417 VSTNPPEAVKIGTIGYPLPGVDVQIDERVADQAAFADDPGDVGELLVKGPNVTQGYWNKP 476
Query: 308 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 367
AT A EDGW TGDI +R G L RAK +VLSTG+NV P +
Sbjct: 477 GATTGAFTEDGWFRTGDI----------IHQRPDGFLEFRERAKQIMVLSTGKNVAPAPI 526
Query: 368 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
E+A S +I Q +V+G ++ GA++VP+ +
Sbjct: 527 EDAFAASEIIEQCMVVGDGEKFIGALLVPNSD 558
>gi|456352266|dbj|BAM86711.1| long-chain-fatty-acid-CoA ligase [Agromonas oligotrophica S58]
Length = 623
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 124/378 (32%), Positives = 197/378 (52%), Gaps = 48/378 (12%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 80
+I +D+A VYTSGTTG PKGVML+H N++ +++++ + A+ D FLS LP H +E
Sbjct: 190 SIAPEDLAAIVYTSGTTGRPKGVMLSHDNVVSNLKAIHQRLVADGDDVFLSFLPLSHTFE 249
Query: 81 RACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
R GY+ + G + Y +V+ L DDL +P +ISVP +YE +YS + ++A
Sbjct: 250 RTAGYYYPVAIGASVAYARSVKQLSDDLMEVRPTILISVPRIYERIYSVVMHHRAVANA- 308
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
+ RAL+ ++ A + + TR ++L+D WP L
Sbjct: 309 ---IERALLDLTIAIGGRRFDAQHGRGTR--------LSLLD--------RAAWP---LL 346
Query: 199 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
++LV K+ + G + VSGG + + + A+G++V GYG+TE+SPV++ P
Sbjct: 347 KRLVADKVLNRFGGRLQVAVSGGAPIAEPVVRLFLALGLEVLQGYGMTETSPVVSVNTPD 406
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
N +VG + E++I G+ + VRG+ VM Y+ P T + + D
Sbjct: 407 DNDPRTVGRALPGIEVRI-----------GANDELMVRGANVMLAYWHRPEETARVKEAD 455
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GWL+TGD ++R G + + GR KD +V STGE + P +LE A L L
Sbjct: 456 GWLHTGD-----------QARIDQGRITITGRIKDILVTSTGEKIAPADLETAILTDPLF 504
Query: 378 RQIVVIGQDQRRPGAIIV 395
Q +VIG+++ AI+V
Sbjct: 505 EQAIVIGENRPFLAAIVV 522
>gi|292656046|ref|YP_003535943.1| acyl-CoA synthetase [Haloferax volcanii DS2]
gi|448290037|ref|ZP_21481193.1| acyl-CoA synthetase [Haloferax volcanii DS2]
gi|291372084|gb|ADE04311.1| acyl-CoA synthetase [Haloferax volcanii DS2]
gi|445580429|gb|ELY34808.1| acyl-CoA synthetase [Haloferax volcanii DS2]
Length = 666
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 132/391 (33%), Positives = 192/391 (49%), Gaps = 58/391 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV--PAENGDK--------FLSMLP 74
+D+A+ +YTSGTTG PKGV LTH N + Y + GD LS LP
Sbjct: 207 EDLASLIYTSGTTGQPKGVRLTHWNFRSNVNESYRRFGPRPDKGDTPVIGPDAVTLSFLP 266
Query: 75 PWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
HV+ER G+F+ F+ G + Y + L++D Q +P SVP VYE LY I+ Q
Sbjct: 267 LAHVFERMAGHFMMFAAGATVAYAESPDTLREDFQLVRPTVGTSVPRVYEKLYDAIRAQA 326
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
S A +RV A + + AY P YL L
Sbjct: 327 SESPAKKRVFEWA-VGVGQAY-------------HTTDAPGYL---------------LT 357
Query: 193 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
H LA++LV+ +++ A+G + +SGGGSL + Y A+G+ + GYGLTE+SPVI
Sbjct: 358 AKHRLADRLVFGQVRDALGGNLDFFISGGGSLSAELCALYHAMGLPIYEGYGLTETSPVI 417
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYFKNPSA 309
+ P +G++G+P+ + E K+ + L G G + VRG V +GY+ +P
Sbjct: 418 SVNPPEAPKIGTIGYPLRNVETKLDTTVVGDQLGEAGGEVGELLVRGPSVTEGYWNDPEE 477
Query: 310 TKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 365
T+ A ED W TGD+ RR G + RAK +VLSTG+NV P
Sbjct: 478 TEAAFVEDDEGRRWFRTGDV----------VERRPDGYIAFRERAKQILVLSTGKNVAPG 527
Query: 366 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 396
+E+A S ++ Q +V+G ++ A+IVP
Sbjct: 528 PIEDAFASSPVVEQCMVLGDGRKFVSALIVP 558
>gi|256375521|ref|YP_003099181.1| AMP-dependent synthetase and ligase [Actinosynnema mirum DSM 43827]
gi|255919824|gb|ACU35335.1| AMP-dependent synthetase and ligase [Actinosynnema mirum DSM 43827]
Length = 602
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 130/388 (33%), Positives = 192/388 (49%), Gaps = 53/388 (13%)
Query: 16 HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP--AENGDKFLSML 73
H + G+DD+AT VYTSGTTG PKG LTH+NLL +IR ++P + G+ L L
Sbjct: 175 HARRRVAGADDVATIVYTSGTTGKPKGCELTHRNLLSEIREAVTLMPHLLQAGNTLLVFL 234
Query: 74 PPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
P H+ R + + +T VR L +DL ++P ++++VP V+E +Y+G KQ
Sbjct: 235 PLAHILARVLALCALYTRVTVGHTQDVRKLVEDLGTFRPTFVVAVPRVFEKVYNG-AKQK 293
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
+ ++ A A TA + + P L+ +
Sbjct: 294 AEAEGKGKIFAIA------EATAVE-----YSRAEETGGPGLLLKV-------------- 328
Query: 193 PLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
H + +KLVY+++++A+G A VSGG L + F+ IGV V GYGLTE++
Sbjct: 329 -KHAVFDKLVYRRLKAALGGRCIAAVSGGAPLGERLAHFFRGIGVPVMEGYGLTETTAAA 387
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 311
T +G+VG P+ T ++I G G V ++G V + Y+ NP AT+
Sbjct: 388 CLNTATAVRVGTVGKPVGGTSVRI-----------GEDGEVLIKGDVVFRSYWDNPKATE 436
Query: 312 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 371
+AL EDGW +TGDIG + G L + GR K+ IV + G+NV P LE+
Sbjct: 437 EAL-EDGWFHTGDIGEL----------DADGFLKITGRKKEIIVTAGGKNVSPAVLEDRL 485
Query: 372 LRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
LI Q +VIG Q GA+I D E
Sbjct: 486 RAHPLISQCMVIGDAQPFIGALITIDPE 513
>gi|448307028|ref|ZP_21496929.1| AMP-dependent synthetase and ligase [Natronorubrum bangense JCM
10635]
gi|445596575|gb|ELY50660.1| AMP-dependent synthetase and ligase [Natronorubrum bangense JCM
10635]
Length = 648
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 124/394 (31%), Positives = 195/394 (49%), Gaps = 56/394 (14%)
Query: 23 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI----------VPAENGDKF-LS 71
G DD+A+ +YTSGTTG PKGV LTH N + ++ +P+ + + +S
Sbjct: 204 GLDDLASLIYTSGTTGQPKGVQLTHWNFRSNVNAVRKRFAPRPDKPAGIPSLDEESLAVS 263
Query: 72 MLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQ 129
LP HV+ER G+F+ F+ G + Y + L++D QP SVP VYE +Y I+
Sbjct: 264 YLPLAHVFERTAGHFVLFASGSCVAYAESPDTLQEDFGTVQPTMATSVPRVYEKIYDAIR 323
Query: 130 KQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICA 189
+Q S +R+ A +++ A
Sbjct: 324 EQASESGVKKRIFEWATD-----------------------------VGVEYQQADSPGP 354
Query: 190 ILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESS 248
IL +A+ LV+ ++ A+G + +SGGGSL + Y A+G+ + GYGLTE+S
Sbjct: 355 ILSAKQSIADTLVFSTVREALGGEIELLISGGGSLSADLCQLYHAMGLPIYEGYGLTETS 414
Query: 249 PVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL---PAGSKGIVKVRGSQVMQGYFK 305
PV++ P +G++G+P+ ++KI ++ ++ G G + V+G V QGY+
Sbjct: 415 PVVSTNPPEAVKIGTIGYPLPGVDVKIDESAADQAAFTDDPGDVGELLVKGPNVTQGYWN 474
Query: 306 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 365
P AT A +DGW TGDI +R G L RAK +VLSTG+NV P
Sbjct: 475 KPGATTGAFTDDGWFRTGDI----------IHQRPDGFLEFRERAKQIMVLSTGKNVAPA 524
Query: 366 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
+E+A S +I Q +V+G ++ GA++VP+ +
Sbjct: 525 PIEDAFAASEIIEQCMVVGDGEKFIGALLVPNSD 558
>gi|448727043|ref|ZP_21709420.1| acyl-CoA synthetase [Halococcus morrhuae DSM 1307]
gi|445792243|gb|EMA42854.1| acyl-CoA synthetase [Halococcus morrhuae DSM 1307]
Length = 643
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 132/423 (31%), Positives = 210/423 (49%), Gaps = 57/423 (13%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY----------DIVPAENGDKFLSMLP 74
DD+A+ VYTSGTTG PKGV LTH+N + +Y D+ + LS LP
Sbjct: 206 DDLASLVYTSGTTGQPKGVRLTHRNFKANVDQVYRRFGPREDKGDLPTIDPSASTLSFLP 265
Query: 75 PWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
HV+ER G+F+ F+ G + Y + L++D P SVP VYE LY I++Q
Sbjct: 266 LAHVFERLAGHFLMFAAGATVAYAESPDTLQEDFPLVTPSTGTSVPRVYEKLYDSIREQA 325
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
S R+ A + + Y +R G L +
Sbjct: 326 GESPLRERIFEWA-VDVGREYQ--QRESPGLSLRAKRA---------------------- 360
Query: 193 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
LA++LV+++++ +G + + +SGGGSL + ++ +G+ + GYGLTE++PV+
Sbjct: 361 ----LADRLVFEQVREGVGGNIEFFISGGGSLSPELGRLFDGMGLPILEGYGLTETAPVV 416
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAET--NEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
A P +G++G P+ EIK VDA +++ G G + VRG V GY++NP A
Sbjct: 417 AVNPPEAPEIGTIGPPVVDEEIK-VDASVVPDDLDADGEVGELLVRGPNVTDGYWENPEA 475
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T+ + D + W TGD+ RR G + R+K +VLSTG+NV P +E+
Sbjct: 476 TEDSFDGE-WFRTGDV----------VERRPDGYIAFRERSKQLLVLSTGKNVAPGPIED 524
Query: 370 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLY 428
A + L+ Q +V+G ++ ++VP++E V A I + D+S L + + +
Sbjct: 525 AFAQRQLVEQCMVLGDGEKFVSGLVVPNEERVRKWAGEEGIDLPEDSSALCQNEHVQARI 584
Query: 429 GEL 431
GE+
Sbjct: 585 GEV 587
>gi|448570160|ref|ZP_21639154.1| acyl-CoA synthetase [Haloferax lucentense DSM 14919]
gi|445723461|gb|ELZ75103.1| acyl-CoA synthetase [Haloferax lucentense DSM 14919]
Length = 666
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 131/391 (33%), Positives = 190/391 (48%), Gaps = 58/391 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY----------DIVPAENGDKFLSMLP 74
DD+A+ +YTSGTTG PKGV LTH N + Y D G LS LP
Sbjct: 207 DDLASLIYTSGTTGQPKGVRLTHWNFRSNVNESYRRFGPRPDKGDTPVIGPGAVALSFLP 266
Query: 75 PWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
HV+ER G+F+ F+ G + Y + L++D Q +P SVP VYE LY I+ Q
Sbjct: 267 LAHVFERMAGHFMMFAAGATVAYAESPDTLREDFQLVRPTVGTSVPRVYEKLYDAIRAQA 326
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
S A +RV A + + AY P YL L
Sbjct: 327 SESPAKKRVFEWA-VGVGQAY-------------HTTDAPGYL---------------LT 357
Query: 193 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
H LA++LV+ +++ A+G + +SGGGSL + Y A+G+ + GYGLTE+SPV+
Sbjct: 358 AKHRLADRLVFGQVRDALGGNLDFFISGGGSLSAELCALYHAMGLPIYEGYGLTETSPVV 417
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYFKNPSA 309
+ P + ++G+P+ + E K+ + L G G + VRG V +GY+ +P
Sbjct: 418 SVNPPEAPKISTIGYPLRNVETKLDTTVVGDQLGEAGGEVGELLVRGPSVTEGYWNDPEE 477
Query: 310 TKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 365
T+ A ED W TGD+ RR G + RAK +VLSTG+NV P
Sbjct: 478 TEAAFVEDDEGRRWFRTGDV----------VERRPDGYIAFRERAKQILVLSTGKNVAPG 527
Query: 366 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 396
+E+A S ++ Q +V+G ++ A+IVP
Sbjct: 528 PIEDAFASSPVVEQCMVLGDGRKFVSALIVP 558
>gi|350561364|ref|ZP_08930203.1| AMP-dependent synthetase and ligase [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349781471|gb|EGZ35779.1| AMP-dependent synthetase and ligase [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 630
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 128/376 (34%), Positives = 191/376 (50%), Gaps = 53/376 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
D +A+ VYTSGT+G PKGVML+H+N L + D V + D+ LS LP H ER G
Sbjct: 204 DTLASIVYTSGTSGRPKGVMLSHRNFLSNAHACLDAVAVSSADRLLSFLPLSHTLERTVG 263
Query: 85 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y+ S GI Y +V L +DL + +P +I+VP V+E +++ I + +S RR +
Sbjct: 264 YYAAVSAGIATAYARSVTRLAEDLVQVRPTILIAVPRVFERMHARILGHVSAASPTRRRL 323
Query: 143 ARALIRISFAYTAFKRIYE-GFC-LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
F R E G+ Q++ + AL+ LH L +
Sbjct: 324 -------------FDRAQELGWRRFLHAQRRGRWSPALL--------------LHPLLDP 356
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
+V ++++ +G + +SGG LP + F+ A GV V GYGLTE+SPVIA R N
Sbjct: 357 VVGARVRARLGGRLRFAISGGAPLPEAVGRFFIACGVPVLQGYGLTETSPVIAVNRLEDN 416
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
+VG + E++I E +E+ R VM GY+ + AT+ ALD DGW
Sbjct: 417 EPATVGPALPGVEVRI--GEHDELC---------TRSPSVMAGYWNDRHATRAALDADGW 465
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
L+TGD I P G + + GR KD +VLS GE V P ++E+A + + Q
Sbjct: 466 LHTGDQARIGPR----------GHITITGRLKDILVLSNGEKVAPADVEQALAGTPWVEQ 515
Query: 380 IVVIGQDQRRPGAIIV 395
++VIG+ + A++V
Sbjct: 516 VMVIGEGRPFLAALVV 531
>gi|319940752|ref|ZP_08015093.1| AMP-dependent synthetase and ligase [Sutterella wadsworthensis
3_1_45B]
gi|319805812|gb|EFW02586.1| AMP-dependent synthetase and ligase [Sutterella wadsworthensis
3_1_45B]
Length = 609
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 131/389 (33%), Positives = 202/389 (51%), Gaps = 44/389 (11%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+A +YTSGTTG PKGVMLTH+N++ +++ + V + GD FLS LP H +ER G
Sbjct: 184 DDLAGIIYTSGTTGRPKGVMLTHRNIVSNVKATLECVSPKVGDTFLSFLPLSHTFERTAG 243
Query: 85 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y++ + G + Y +V L +DL+ +P +ISVP VYE +Y+ +Q ++ S R +
Sbjct: 244 YYLALATGCIIAYNRSVLLLAEDLKTIKPTVIISVPRVYERIYARVQDKLRKS----RPI 299
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
A+ L F + A + + FC R P WL I+ A L LH +A L
Sbjct: 300 AKKL----FDW-AVEVGWRDFC--RKNHLPVEKSGR-SWL-DGIVRATL--LHKMANTL- 347
Query: 203 YKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
+ G + +SGG +L + + +G+ + GYG+TE+SP+IA N
Sbjct: 348 ---LSQFGGRLRIAISGGAALNHKVARTFCGLGLPIIQGYGMTEASPIIAGNCVEFNQPD 404
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
+VG P + EI++ E NE ++VR +M+GY+ P T A +DGWL T
Sbjct: 405 TVGKPFCNVEIRL--GEGNE---------IQVRAPSIMKGYWHRPEDTAAAFTKDGWLKT 453
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD+G G+L ++GR K+ IV STGE + P +LE A L Q +
Sbjct: 454 GDVG----------EFNADGMLKIKGRIKEIIVTSTGEKIPPADLESAIETDPLFAQAYI 503
Query: 383 IGQDQRRPG--AIIVPDKEEVLMAAKRLS 409
+G+++ G A++ P++ L A+ L
Sbjct: 504 VGENKPYLGLLAVVEPNEWASLAASLNLD 532
>gi|389847450|ref|YP_006349689.1| acyl-CoA synthetase [Haloferax mediterranei ATCC 33500]
gi|448617228|ref|ZP_21665883.1| acyl-CoA synthetase [Haloferax mediterranei ATCC 33500]
gi|388244756|gb|AFK19702.1| acyl-CoA synthetase [Haloferax mediterranei ATCC 33500]
gi|445748577|gb|EMA00024.1| acyl-CoA synthetase [Haloferax mediterranei ATCC 33500]
Length = 667
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 130/391 (33%), Positives = 190/391 (48%), Gaps = 58/391 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY---------DIVPAENGDKF-LSMLP 74
DD+A+ +YTSGTTG PKG LTH N + Y PA + D LS LP
Sbjct: 207 DDLASLIYTSGTTGQPKGAQLTHWNFRSNVNESYRRFGPRPNKSDAPAVSPDSVSLSFLP 266
Query: 75 PWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
HV ER G+F+ F+ G + Y + L++D Q QP SVP VYE LY I+ Q
Sbjct: 267 LAHVLERMAGHFMMFAAGATVAYAESPDTLREDFQLVQPTAGTSVPRVYEKLYDAIRAQA 326
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
S +R+ A + + Y P YL++
Sbjct: 327 SESPVKKRIFEWA-VDVGQEY-------------HTTDSPGYLLSA-------------- 358
Query: 193 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
H +A++LV+ +++ A+G + + +SGGGSL + Y A+G+ + GYGLTE+SPVI
Sbjct: 359 -KHRVADRLVFDQVREALGGNIEFFISGGGSLSAELCALYHAMGLPIFEGYGLTETSPVI 417
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYFKNPSA 309
P +G++G+P+ EIK+ + L G G + VRG V GY+ P
Sbjct: 418 TVNPPEAPKIGTIGYPLREVEIKLDKTVVGDQLGDAGGEVGELLVRGPNVTPGYWNRPEE 477
Query: 310 TKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 365
T++A ED W TGD+ RR G + RAK +VLSTG+NV P
Sbjct: 478 TEEAFVEDDEGNRWFRTGDV----------VERRPDGYIAFRERAKQILVLSTGKNVPPG 527
Query: 366 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 396
+E+A S+++ Q +V+G ++ A+IVP
Sbjct: 528 PIEDAFASSTVVEQCMVLGDGRKFISALIVP 558
>gi|399577910|ref|ZP_10771662.1| amp-forming long-chain acyl-CoA synthetase [Halogranum salarium
B-1]
gi|399237352|gb|EJN58284.1| amp-forming long-chain acyl-CoA synthetase [Halogranum salarium
B-1]
Length = 658
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 141/449 (31%), Positives = 216/449 (48%), Gaps = 60/449 (13%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY----------DIVPAENGDKFLSMLP 74
DD+A+ +YTSGTTG PKGV LTH+N + + D + LS LP
Sbjct: 214 DDLASLIYTSGTTGQPKGVQLTHRNFRANVNQCFRRFGPRPDDPDRLAITPDSTTLSFLP 273
Query: 75 PWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
HV+ER G Y +F+ G + Y + L++D Q +P SVP VYE LY I+ Q
Sbjct: 274 LAHVFERLAGHYLMFAAGATVAYAESPDTLREDFQLVRPTTGTSVPRVYEKLYDAIRTQA 333
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
S R+ A + + AY G LT
Sbjct: 334 SESPVKERIFEWA-VGVGQAYHEVDN--PGTALTLK------------------------ 366
Query: 193 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
H +A++LV+ +++ AIG + +SGGGSL + Y +G+ + GYGLTE+SPV+
Sbjct: 367 --HRIADRLVFSQVREAIGGRLEFFISGGGSLSADLCALYHGMGLPILEGYGLTETSPVV 424
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK---VRGSQVMQGYFKNPS 308
+ P +G++G P+ EI+I ++ EV ++G V V+G V GY+ P
Sbjct: 425 SVNPPNGPKIGTIGTPVVDVEIEIDESVVGEVQRRETEGQVGELLVKGPNVTSGYWNRPE 484
Query: 309 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 368
T+Q+ E GW TGDI + P G + RAK +VLSTG+NV P +E
Sbjct: 485 ETEQSFTE-GWFRTGDIVHLRPD----------GYIEFRERAKQLLVLSTGKNVAPGPIE 533
Query: 369 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTI-SL 426
+A + L+ Q +V+G ++ A++VP+ E V A R I + D +L++++ + +
Sbjct: 534 DAFASNQLVEQCLVLGDGKKFVSALLVPNVEAVHEWADREGIDLPEDRRKLARDERLRAR 593
Query: 427 LYGELRKWTSKCSF--QIGPIHVVDEPFT 453
L E+ + + QI +V E FT
Sbjct: 594 LQREVDQVNERLESYEQIKQFRIVTEEFT 622
>gi|228471964|ref|ZP_04056732.1| long-chain-fatty-acid--CoA ligase family protein [Capnocytophaga
gingivalis ATCC 33624]
gi|228276576|gb|EEK15289.1| long-chain-fatty-acid--CoA ligase family protein [Capnocytophaga
gingivalis ATCC 33624]
Length = 597
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 138/471 (29%), Positives = 231/471 (49%), Gaps = 68/471 (14%)
Query: 3 FSLPILTPVIAGKHYKYETI--------GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 54
F LP+ V G+ +YE + DI T +YTSGTTGNPKGV++ ++N+ +Q
Sbjct: 149 FVLPLSQFVRTGQEEEYEQLLKERVAQRNMQDIYTIIYTSGTTGNPKGVLIDYENVAYQF 208
Query: 55 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHY 113
+ D + G+ LS LP HVYER ++ +G+ Y N + + L+ +PHY
Sbjct: 209 INHDDRLAVVEGNVSLSFLPLSHVYERMWVAYVLHKGVINCYLDDTNRVAEVLKEVRPHY 268
Query: 114 MISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 173
M VP + E +Y+ I + + S +R+V RI A R +G K+PS
Sbjct: 269 MCVVPRLLEKIYTKIYENVEKQSVLKRLVFATATRI--AKIQLGRKKKG-------KKPS 319
Query: 174 YLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYE 232
+L L + +A+++V++K+++A+G + + GG+ L I F+
Sbjct: 320 FL---------------LQKAYNVADRVVFQKLKAALGGNIQMIPCGGALLEPSIGRFFR 364
Query: 233 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 292
AIGV V +GYG+TE++ ++ L SVG + + ++KI E NE+L
Sbjct: 365 AIGVNVTLGYGMTETTATVSCWDDHKFKLKSVGTLVPNMQVKI--GENNEIL-------- 414
Query: 293 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 352
++G + +GY+ NP +A EDG+L TGD G+I G L + R K+
Sbjct: 415 -LKGGSITKGYYNNPEENAKAFTEDGFLRTGDAGYIDKE----------GNLFITERIKE 463
Query: 353 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 412
+ S G+ + P ++E + S I QI +I ++ A+IVP+ + + AK L++ +
Sbjct: 464 LMKTSNGKYIAPQQIEGKVGKDSFIEQIAIIADARKYVSALIVPNYDALAEYAKSLNLKY 523
Query: 413 ADASELSK--------EKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 455
+ +EL K +K + L EL + QI ++ PF++N
Sbjct: 524 KNYAELIKNSQIVEFFQKRLQNLQQELASYE-----QIKKFTLLTTPFSIN 569
>gi|448320502|ref|ZP_21509989.1| AMP-dependent synthetase and ligase [Natronococcus amylolyticus DSM
10524]
gi|445605967|gb|ELY59882.1| AMP-dependent synthetase and ligase [Natronococcus amylolyticus DSM
10524]
Length = 661
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/406 (31%), Positives = 200/406 (49%), Gaps = 59/406 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNL---LHQIRSLYDIVPAENGD--------KFLSML 73
DD+A+ +YTSGTTG PKGV LTH+N ++Q+R Y P ++ + + +S L
Sbjct: 206 DDLASLIYTSGTTGQPKGVQLTHRNFRSNVNQVRKRYGPRPDKDDELPVIDETVQSVSYL 265
Query: 74 PPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P HV+ER G+F+ F+ G + Y + LK+D QP SVP VYE +Y I++Q
Sbjct: 266 PLAHVFERTSGHFLLFASGACVAYAESTDTLKEDFGTVQPDTATSVPRVYEKIYDTIREQ 325
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
S A +R+ A + Y + P IL
Sbjct: 326 ASESGAKKRIFEWA-TDVGVEY-------------QESDDPG---------------PIL 356
Query: 192 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
LA+KLV+ ++ A+G + +SGGGSL + Y A+G+ + GYGLTE++PV
Sbjct: 357 SAKQSLADKLVFSNVREALGGEIELLISGGGSLSKELCTLYHAMGLPIYEGYGLTETAPV 416
Query: 251 IAARRPTCNVLGSVGHPINHTEIKIVDA--ETNEVLPAGSKGIVKVRGSQVMQGYFKNPS 308
++ P +G++G P+ +++I D+ E G G + V G V QGY+ P
Sbjct: 417 VSVNPPEAPEIGTIGPPLPGVDVRIDDSLVEGETFDDPGEVGELLVSGPNVTQGYWNKPG 476
Query: 309 ATKQAL--DEDG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 364
AT ++ D+DG W TGDI + P + R K +VLSTG+NV P
Sbjct: 477 ATTESFLEDDDGSRWFRTGDIVHLRPDD----------YIEFRDRVKQILVLSTGKNVAP 526
Query: 365 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 410
+E+A S ++ Q +V+G ++ GA++VP+ + + A I
Sbjct: 527 GPIEDAFAASEVVEQCMVVGDGKKFVGALLVPNTDHIREWADEQGI 572
>gi|268317263|ref|YP_003290982.1| AMP-dependent synthetase and ligase [Rhodothermus marinus DSM 4252]
gi|262334797|gb|ACY48594.1| AMP-dependent synthetase and ligase [Rhodothermus marinus DSM 4252]
Length = 630
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/380 (33%), Positives = 188/380 (49%), Gaps = 56/380 (14%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNL----LHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
D+AT +YTSGTTG PKGVML+H+N+ L + P +G+ LS LP HV+ R
Sbjct: 199 DLATIIYTSGTTGRPKGVMLSHENISFNALTSFSGIKQYRPGPDGEVALSFLPLTHVFAR 258
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y + +T L+D L++ +P +VP V E +Y + ++ +
Sbjct: 259 TLFYGYLYYATSVYFTTPDALRDALRQVRPTTFATVPRVLEKIYGALVERAAAMPGLKGR 318
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL-LAEK 200
+ R + ++ R YE L R + L+ L L +A++
Sbjct: 319 IFRWALDLA-------RRYE---LGREPRG-------------------LYRLQLAVADR 349
Query: 201 LVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LVY+K + A+G A + +GG +L + + A G+ + GYGLTE+SPVI RP N
Sbjct: 350 LVYRKWREAMGGRIAFIIAGGAALSAELANIFAAAGIPILQGYGLTETSPVITYNRPELN 409
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
G+VG PI E+KI AE E+L RG VM GY+K+P T++ +DE+GW
Sbjct: 410 RAGTVGVPIPGVEVKI--AEDGEIL---------TRGPHVMLGYYKDPERTREVIDEEGW 458
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
+TGDIG+ G LV+ R KD LSTG+ V P LE+ L+ Q
Sbjct: 459 FHTGDIGYFTEE----------GFLVITDRKKDLFKLSTGKYVMPQPLEQRLTADPLVEQ 508
Query: 380 IVVIGQDQRRPGAIIVPDKE 399
+V+G + A+I PD+E
Sbjct: 509 ALVVGPGYKFTAALIFPDEE 528
>gi|448739566|ref|ZP_21721578.1| AMP-dependent synthetase and ligase [Halococcus thailandensis JCM
13552]
gi|445799185|gb|EMA49566.1| AMP-dependent synthetase and ligase [Halococcus thailandensis JCM
13552]
Length = 653
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 134/431 (31%), Positives = 211/431 (48%), Gaps = 70/431 (16%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNL---LHQIRSLYDIVPAENGD--------KFLSM 72
SDD+A+ +YTSGTTG PKGV +TH+N ++Q+R + P ++ D LS
Sbjct: 206 SDDLASLIYTSGTTGKPKGVRMTHRNFRANINQLRKRFGDRPDKSADLPSVGRETVALSF 265
Query: 73 LPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQK 130
LP HV+ER G +F+F+ G + Y + + +D++ QP SVP +YE ++ +++
Sbjct: 266 LPLAHVFERLAGHFFLFASGATVAYAESADTVAEDIRTVQPTTATSVPRIYERIFDSMRE 325
Query: 131 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 190
S+ RR+ RA+ A KR T + P +
Sbjct: 326 DA-DSAIRRRIFERAV-------AAAKR-------TSRRDDPGRTLRF------------ 358
Query: 191 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
LA++LVY ++ A+G + + +SGGGSL + ++ + + + GYGLTE++P
Sbjct: 359 ---ERALADRLVYSTVKEAMGGNIEFFISGGGSLSPELARLFDGMDLPIYEGYGLTEAAP 415
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA------GSKGIVKVRGSQVMQGY 303
V++ P G++G + E ++ DA VLPA G G + VRG V GY
Sbjct: 416 VVSVNPPEAPKPGTLGPALTGVETRL-DAS---VLPADQYDRDGDVGELLVRGPNVTDGY 471
Query: 304 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 363
++NP T ++DGWL TGDI R G V R K +VLSTG+NV
Sbjct: 472 WENPEETDADFEDDGWLRTGDIV----------ERDVDGYFVYHERLKQLLVLSTGKNVA 521
Query: 364 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKT 423
P +E+A S + Q +V+G D++ A++VP+ E + A R ++ EL E+
Sbjct: 522 PGPIEDAFATSERVEQAMVLGDDEKFVSALVVPNFEGLRAWAARKNV------ELPSERA 575
Query: 424 ISLLYGELRKW 434
R+W
Sbjct: 576 ALCRDENAREW 586
>gi|228472919|ref|ZP_04057676.1| long-chain-fatty-acid--CoA ligase family protein [Capnocytophaga
gingivalis ATCC 33624]
gi|228275501|gb|EEK14278.1| long-chain-fatty-acid--CoA ligase family protein [Capnocytophaga
gingivalis ATCC 33624]
Length = 592
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 134/442 (30%), Positives = 209/442 (47%), Gaps = 71/442 (16%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E I D+AT +YTSGTTG PKGVML+H N++ I++ ++ VP ++GD LS LP HV+
Sbjct: 168 EQIQPTDMATIIYTSGTTGKPKGVMLSHDNIISNIKNCHERVPVKSGDICLSFLPVCHVF 227
Query: 80 ERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGI-QKQIFTSSA 137
ER Y GI L + + + ++ +P + VP V E +Y I K + S
Sbjct: 228 ERMLTYLYQYNGIRLYFAESFEKVAVNIGEVKPRLITVVPRVVEKVYDSIYSKGVALSGI 287
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
A+ + AL R+ + Y + NQK Y + L +
Sbjct: 288 AKSLFFWAL-RLGYQYEPY-----------NQKGWWYSLKL-----------------KI 318
Query: 198 AEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
A KL++ K + A+G + G +L + + A G+ + GYGLTE+SPVI+
Sbjct: 319 ARKLIFSKWKKALGGQLQMICGSAALQPRLVRVFSAAGIPIWEGYGLTETSPVISVNCKK 378
Query: 258 CNV--LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
++ +G++G PI+H E+KI AE E+L +GS +M GY+KN T A+D
Sbjct: 379 GHLWKIGTIGKPIDHIEVKI--AEDGEIL---------CKGSNIMLGYYKNEEQTHNAID 427
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
EDG+ +TGDIG++ G L + R K+ S G+ + P +E +S
Sbjct: 428 EDGFFHTGDIGFLDKE----------GFLTITDRKKEMFKTSGGKYIAPQYIENKLKQSR 477
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-------------K 422
I Q +V+G+ ++ P A + + V KR H D LS E +
Sbjct: 478 FIEQAMVVGEGEKMPAAFLQVNFAFVREWLKR----HGDKQTLSNEALVKDERVRERITQ 533
Query: 423 TISLLYGELRKWTSKCSFQIGP 444
+ + +L KW +F + P
Sbjct: 534 EVERINKKLGKWEQIKAFDLTP 555
>gi|302868999|ref|YP_003837636.1| AMP-dependent synthetase and ligase [Micromonospora aurantiaca ATCC
27029]
gi|302571858|gb|ADL48060.1| AMP-dependent synthetase and ligase [Micromonospora aurantiaca ATCC
27029]
Length = 600
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/380 (32%), Positives = 190/380 (50%), Gaps = 51/380 (13%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDKFLSMLPPWHVYER 81
+DD+AT +YTSGTTG PKG +LTH+N+ I + ++P G L LP H + R
Sbjct: 179 ADDVATIIYTSGTTGRPKGCVLTHRNIYSDIANAVPVLPNLFRQGASTLLFLPLAHAFAR 238
Query: 82 ACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
+ + + A +NL +LQ ++P +++SVP V+E +Y+G +Q S +
Sbjct: 239 LIQVGVVHARATMAHCADTKNLVAELQDFKPTFVLSVPRVFEKVYNG-ARQKAESEGKGK 297
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+ RA +++ A++ + + G L L H L +K
Sbjct: 298 IFDRAE-KVAIAWSEAQELPGGPGLG------------------------LRAQHALFDK 332
Query: 201 LVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LVY+K+++A+G + + +SGG L + F+ +GV + GYGLTE+SP AA PT
Sbjct: 333 LVYRKLRAAMGGLCRDAISGGAPLGARLGHFFRGVGVTICEGYGLTETSPAAAANLPTGT 392
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
+G+VG P+ I+I D G V + G V QGY+ N +AT +A+ DGW
Sbjct: 393 RIGTVGRPLPGVTIRIDD-----------DGEVLIAGDIVFQGYWHNDAATAEAISTDGW 441
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
TGD+G + G L + GR K+ IV + G+NV P LE+ LI Q
Sbjct: 442 FRTGDLGHLDDD----------GYLSITGRKKEIIVTAGGKNVAPAVLEDQVRAHPLISQ 491
Query: 380 IVVIGQDQRRPGAIIVPDKE 399
VV+G Q A++ D+E
Sbjct: 492 CVVVGDRQPFIAALVTIDEE 511
>gi|384172735|ref|YP_005554112.1| long-chain-fatty-acid-CoA ligase [Arcobacter sp. L]
gi|345472345|dbj|BAK73795.1| long-chain-fatty-acid-CoA ligase [Arcobacter sp. L]
Length = 580
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 132/426 (30%), Positives = 207/426 (48%), Gaps = 62/426 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
D+I + +YTSG TG PKGVMLTHKN++ Q+R + ++ + LS+LP H++ER
Sbjct: 170 DEIFSIIYTSGNTGTPKGVMLTHKNIVSQLRDINKLIDLPKEEVALSLLPLAHIFERTVM 229
Query: 85 YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
+ SRGI + + + N+ + ++ +P M VP + E +++ I+ QI +++A
Sbjct: 230 SYYLSRGISIYFVDDILNVANLMKIVKPTIMTVVPRLLEKIFNKIKTQILEKPFFSKIIA 289
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
++F+Y L N + S+L + D KLVY
Sbjct: 290 ----SLAFSY----------ALKENLDKSSFLFKIYD-------------------KLVY 316
Query: 204 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K + G + VSGG L I F+ IGV V GYGLTE SPVI+ P+ N +G
Sbjct: 317 SKFREIFGSRVQKLVSGGAPLSKEIAQFFVNIGVPVYQGYGLTEFSPVISTNYPSANKVG 376
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S G I +IKI A+ E+L V G +M+GY T + +D+DGWL+T
Sbjct: 377 SCGKVIPSAKIKI--AQNKELL---------VSGPSLMKGYLNQEELTAKTIDKDGWLHT 425
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GDI ++ G L + R K+ STGE V + +E+ + I VV
Sbjct: 426 GDIAYLDEE----------GYLFITSRLKEIFKTSTGEYVNAVAIEQKLSKDRYIEFAVV 475
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAK---RLSI-VHADASEL--SKEKTISLLYGELRKWTS 436
I ++++ A++ DKE+ +A K L+I + E+ + K IS + +L +W
Sbjct: 476 ISENKKFTTALLFIDKEKYQLAKKINNNLTIEEYYKQPEILDNISKHISNINKDLNQWEK 535
Query: 437 KCSFQI 442
F+I
Sbjct: 536 IVDFRI 541
>gi|387131449|ref|YP_006294339.1| long-chain-fatty-acid--CoA ligase [Methylophaga sp. JAM7]
gi|386272738|gb|AFJ03652.1| Long-chain-fatty-acid--CoA ligase [Methylophaga sp. JAM7]
Length = 610
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/419 (32%), Positives = 206/419 (49%), Gaps = 56/419 (13%)
Query: 16 HYKYETIGSDDI-----ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFL 70
Y ++T+ D+ A+ +YTSGTTG PKGVML+H+N+L + D FL
Sbjct: 174 RYPHQTLIRKDLDGYKLASIIYTSGTTGRPKGVMLSHQNMLSVAYGALQFFDVFHDDVFL 233
Query: 71 SMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGI 128
S LP H ER GY++ G + Y+ V L DDL++ +P +I+VP ++E + +
Sbjct: 234 SFLPLSHTLERTGGYYLPMMAGASVTYSRGVAKLPDDLRQVKPTILIAVPRLFERFSAQL 293
Query: 129 QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 188
+Q+ T S ++ + + +I + ++R QKQ ++ V
Sbjct: 294 NQQLATKSWFQKCLFKLVI-----HAGWRRFL------WQQKQANWHV-----------I 331
Query: 189 AILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESS 248
ILWP +L K+ K +Q G + VSGG +LP + + + +++ GYGLTE+S
Sbjct: 332 QILWP--ILGNKIADKFLQRLGGRLRLAVSGGAALPGYAAKLFIGLQLRLIQGYGLTETS 389
Query: 249 PVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPS 308
P+I+ P N SVG PI KI D E E+L V G M GY+ N
Sbjct: 390 PIISVNPPEKNRPQSVGPPIPGVTTKI-DPENQELL---------VDGPGKMLGYWNNHK 439
Query: 309 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG--GVLVLEGRAKDTIVLSTGENVEPLE 366
AT Q +D DGWL+TGD +C G + + GR KD +VLS GE P +
Sbjct: 440 ATAQTIDVDGWLHTGD------------QAKCDEQGYIHITGRIKDILVLSNGEKFPPSD 487
Query: 367 LEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS 425
+E A L+ L Q +V+G+ Q A++V D E A+ L + + L ++KT+
Sbjct: 488 IENALLQDPLFEQAIVVGEGQSYLAALLVLDGEAWQALAQSLGLDPMRSDSL-QDKTLQ 545
>gi|381159083|ref|ZP_09868316.1| AMP-forming long-chain acyl-CoA synthetase [Thiorhodovibrio sp.
970]
gi|380880441|gb|EIC22532.1| AMP-forming long-chain acyl-CoA synthetase [Thiorhodovibrio sp.
970]
Length = 606
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 130/426 (30%), Positives = 206/426 (48%), Gaps = 56/426 (13%)
Query: 14 GKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSML 73
G + G +++A+ VYTSGTTG PKGVMLTH N+L ++ ++ D FLS L
Sbjct: 176 GAIWHQRAAGPNELASIVYTSGTTGKPKGVMLTHGNILSNVQGALTLLDVYQEDVFLSFL 235
Query: 74 PPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P H+ ER Y++ G L Y +V L +DL+ +P +I+VP V+E +Y + +Q
Sbjct: 236 PLSHMLERTASYYLPMMAGSTLAYARSVTQLAEDLKNVRPTVIIAVPRVFERVYQRLHEQ 295
Query: 132 IFTSSAARRV---VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 188
I A R +AR ++F + +R + L
Sbjct: 296 IRQRPAPTRWLFDLARHFGWVAFEHAQGRRRWHPLLL----------------------- 332
Query: 189 AILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTES 247
LWP + +LV K+ +G +A VSGG LP + + +G+ + GYGLTE+
Sbjct: 333 --LWP---VLRRLVADKVLERLGGRIRAAVSGGAPLPPEVARLFLGLGLPLIQGYGLTET 387
Query: 248 SPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNP 307
SPV++ N +VG P+ +++I +E +E+L V G VM+GY+ N
Sbjct: 388 SPVVSVNPLEDNRPETVGIPLGGVQVRI--SELDELL---------VSGPGVMRGYWNNQ 436
Query: 308 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 367
+AT Q L +DGW TGD ++R G + + GR KD +VLS GE V P ++
Sbjct: 437 AATAQVLGKDGWFRTGD-----------QARLVGRHIQITGRLKDILVLSNGEKVPPADM 485
Query: 368 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLL 427
E A L Q +V+G+ + A++V + + A+ + D + L+ + I +
Sbjct: 486 EMAIALDPLFEQAMVLGEGKPFLSALLVLNADLWPSLARDFQLDPQDPASLNDQGLIKAM 545
Query: 428 YGELRK 433
+RK
Sbjct: 546 LARVRK 551
>gi|383789327|ref|YP_005473901.1| AMP-forming long-chain acyl-CoA synthetase [Spirochaeta africana
DSM 8902]
gi|383105861|gb|AFG36194.1| AMP-forming long-chain acyl-CoA synthetase [Spirochaeta africana
DSM 8902]
Length = 645
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/391 (32%), Positives = 192/391 (49%), Gaps = 51/391 (13%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DDI T YTSGTTGNPKG+ML H+N + ++ G + L +LP H + G
Sbjct: 187 DDIVTVSYTSGTTGNPKGIMLMHRNYIANSSEAIEVFRIPAGYQTLLILPCDHSFAHTVG 246
Query: 85 -----------YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 133
YF+ +RG + +RN+ +L P ++++VP + IQ +
Sbjct: 247 IYASLVAGISLYFVDARGGSM--AILRNIPGNLVETDPTFLLTVPALTGNFMKKIQNGVA 304
Query: 134 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL-WARIICAILW 192
+ + IR A R +G+ Q +L +L W
Sbjct: 305 AKGSFVNGIFERGIRAGIA-----RNGDGY------HQVPFLTRARHFLPW--------- 344
Query: 193 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
LLAE LV++K+++ G K VSGG L + F+ A+G+ V GYG+TE+SP+I
Sbjct: 345 ---LLAELLVFRKVRTIFGKKVKFCVSGGALLDLGQQQFFHALGLPVYQGYGMTEASPII 401
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 311
++ P C LG+ G P ++K+V + +E P G KG + VRG VM+GY KNP AT+
Sbjct: 402 SSNHPWCYKLGTSGKPFPTVQVKVVLQDGSEAAP-GEKGQICVRGPNVMKGYLKNPDATE 460
Query: 312 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 371
+AL DGWL+TGD+G++ G L + GR K ++ + GE P E+EE
Sbjct: 461 EAL-RDGWLHTGDLGFL----------DADGFLTVSGREKALLISADGEKYSPEEIEEVM 509
Query: 372 LRSS-LIRQIVVIGQDQRRPGAIIVPDKEEV 401
+ I Q ++ R GA+IVPD + V
Sbjct: 510 TTACPYISQAMLYNDHNRFTGALIVPDTDAV 540
>gi|197118507|ref|YP_002138934.1| AMP-forming acyl-CoA synthetase [Geobacter bemidjiensis Bem]
gi|197087867|gb|ACH39138.1| acyl-CoA synthetase, AMP-forming [Geobacter bemidjiensis Bem]
Length = 603
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/407 (33%), Positives = 194/407 (47%), Gaps = 55/407 (13%)
Query: 28 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYF 86
AT +YTSGTTG PKG +LTH NL+ + + D V D FLS LP HV+ER+ GY+
Sbjct: 184 ATIIYTSGTTGTPKGAVLTHGNLVFDVWATLDKVGGVGQEDLFLSFLPLSHVFERSVGYY 243
Query: 87 I-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
+ S G + + ++ + +++ P M+ VP +E +YS I + + S +R + R
Sbjct: 244 LPLSCGAAIAFADSMEKISENMMELHPTIMVCVPRFFEKIYSRIYEAVHQLSLFKRKMFR 303
Query: 145 ALIRI--SFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
+ + S+ Y + Y F L+ H +A++LV
Sbjct: 304 RALAVGRSYVYARYIDKYVPFWLSFQ--------------------------HAIADRLV 337
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
+ K++S G K SGG L I+ F+ IGV V GYGLTE+SPV+ +
Sbjct: 338 FSKLRSRFGDRLKFCASGGAPLDREINEFFWIIGVPVFEGYGLTETSPVLCSNSYNGLRF 397
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
GSVG P+ TEI I G V RG QVM GY+ + +ATK+AL DGW
Sbjct: 398 GSVGTPLAFTEIAI-----------AGDGEVLARGPQVMAGYYNDEAATKEAL-VDGWFR 445
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGDIG R G L + R KD IV + G+N+ P +E R I Q
Sbjct: 446 TGDIG-----------RLEEGFLYITDRKKDLIVTAGGKNIAPQPIENLLKRDKYISQAY 494
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
V G + A++VP E +L A+ I + D +L + + LY
Sbjct: 495 VYGDRKPYLTALLVPTLERLLEFAQERRIAYHDLEDLVVHQPVIELY 541
>gi|398822044|ref|ZP_10580434.1| AMP-forming long-chain acyl-CoA synthetase [Bradyrhizobium sp.
YR681]
gi|398227329|gb|EJN13561.1| AMP-forming long-chain acyl-CoA synthetase [Bradyrhizobium sp.
YR681]
Length = 606
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/388 (31%), Positives = 208/388 (53%), Gaps = 49/388 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+D+A VYTSGTTG PKGVML+H N++ ++++ + A D FLS LP H +ER G
Sbjct: 186 NDLAAIVYTSGTTGRPKGVMLSHDNVVANVKAIAHRIEAAPDDVFLSFLPLSHTFERTGG 245
Query: 85 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y+ + G + Y +V L +DL+ +P +ISVP +YE +++ I + ++A R +
Sbjct: 246 YYYPIAAGACVAYARSVPLLSEDLKHVRPTVLISVPRIYERIHALIMQH--RATAGR--I 301
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
RAL+ ++ A + + +Q +A++D L WP L ++LV
Sbjct: 302 ERALLDLTIAVGGRR---------FDARQGRGTLAVVDRL--------AWP---LLKRLV 341
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
K+ + +G + VSGG + + + A+G+ + GYG+TE+SPV++ P N
Sbjct: 342 ADKVLAQLGGRLRVAVSGGAPIAEPVIRLFIALGLDILQGYGMTETSPVVSVNTPEDNDP 401
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
SVGH ++ E+++ E +E+L VRG VM GY+ P T++ + DGWL+
Sbjct: 402 RSVGHVLDGVEVRL--GENDELL---------VRGPSVMLGYWHKPEETRRVKEADGWLH 450
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD ++R G + + GR KD +V STGE + P++LE A L L Q +
Sbjct: 451 TGD-----------QARIDNGRITITGRIKDILVTSTGEKIAPVDLETAILADPLFEQAL 499
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLS 409
V+G+ + A++V + + + ++L+
Sbjct: 500 VVGEQRPFVTALVVLNAKAWVQEKEKLA 527
>gi|448607753|ref|ZP_21659706.1| acyl-CoA synthetase [Haloferax sulfurifontis ATCC BAA-897]
gi|445737690|gb|ELZ89222.1| acyl-CoA synthetase [Haloferax sulfurifontis ATCC BAA-897]
Length = 668
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 132/391 (33%), Positives = 191/391 (48%), Gaps = 58/391 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDK--------FLSMLP 74
+D+A+ +YTSGTTG PKGV LTH N + Y + GD LS LP
Sbjct: 207 EDLASLIYTSGTTGQPKGVQLTHWNFRSNVNESYRRFGPRPDKGDTPVIGPDAVTLSFLP 266
Query: 75 PWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
HV+ER G+F+ F+ G + Y + L++D Q +P SVP VYE LY I+ Q
Sbjct: 267 LAHVFERMAGHFMMFAAGATVAYAESPDTLREDFQLARPTVGTSVPRVYEKLYDAIRTQA 326
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
S A +RV A + + AY P YL L
Sbjct: 327 SESPAKKRVFEWA-VGVGQAY-------------HTTDAPGYL---------------LT 357
Query: 193 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
H LA++LV+ +++ A+G + +SGGGSL + Y A+G+ + GYGLTE+SPVI
Sbjct: 358 AKHRLADRLVFGQVREALGDNIDFFISGGGSLSAELCALYHAMGLPIYEGYGLTETSPVI 417
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYFKNPSA 309
+ P +G++G+P+ E K+ + L G G + VRG V +GY+ +P
Sbjct: 418 SVNPPEEPKIGTIGYPLRTVETKLDATVVGDRLGDAGGEVGELLVRGPSVTEGYWNDPEE 477
Query: 310 TKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 365
T+ A ED W TGD+ RR G + RAK +VLSTG+NV P
Sbjct: 478 TEAAFVEDDEAERWFRTGDV----------VERRPDGYIAFRERAKQILVLSTGKNVAPG 527
Query: 366 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 396
+E+A S ++ Q +V+G ++ A+IVP
Sbjct: 528 PIEDAFASSPVVEQCMVLGDGRKFVSALIVP 558
>gi|289581849|ref|YP_003480315.1| AMP-dependent synthetase and ligase [Natrialba magadii ATCC 43099]
gi|289531402|gb|ADD05753.1| AMP-dependent synthetase and ligase [Natrialba magadii ATCC 43099]
Length = 669
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 139/441 (31%), Positives = 208/441 (47%), Gaps = 80/441 (18%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNL---LHQIRSLYDIVPAENGD--------KFLSML 73
DD+A+ +YTSGTTG PKGV LTH N ++QIR + P + D + +S L
Sbjct: 206 DDLASLIYTSGTTGKPKGVQLTHGNFRSNVNQIRKRFAPRPDRDDDVPVIDSESQAMSYL 265
Query: 74 PPWHVYERACGYFI-FSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P HV+ER G+F+ F+ G + Y + L++D QP+ SVP VYE +Y I++Q
Sbjct: 266 PLAHVFERTAGHFLLFASGACVAYAENPDTLQEDFSTVQPNTATSVPRVYEKIYDAIREQ 325
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
SS +R+ A +++ A IL
Sbjct: 326 ASESSVKKRIFEWATD-----------------------------VGVEYQRADSPGPIL 356
Query: 192 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
LA+KLV+ ++ A+G + +SGGGSL + Y A+G+ + GYGLTE+SPV
Sbjct: 357 NAKRALADKLVFSTVREALGGEIEILISGGGSLSPELCRLYHAMGLPIFEGYGLTETSPV 416
Query: 251 IAARRPTCNVLGSVGHPINHTEIKIVDAETNE--VLPAGSKGIVKVRGSQVMQGYFKNPS 308
IA P +G++G P+ +I I ++ N+ G+ G + VRG V QGY+ PS
Sbjct: 417 IAVNPPEEPKIGTIGPPVVDVDISIDESVVNQDAFDDPGAVGELLVRGPNVTQGYWNKPS 476
Query: 309 ATKQALDE----DG--------------------WLNTGDIGWIAPHHSRGRSRRCGGVL 344
AT +A E DG W TGD+ + R G +
Sbjct: 477 ATDRAFTEGVQPDGGAALEAPREDGDADADDDGLWFRTGDVVHL----------RDDGYI 526
Query: 345 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 404
R K IVLSTG+NV P +E+A S ++ Q +V+G ++ GA++VP+ E +
Sbjct: 527 SFRDRVKQLIVLSTGKNVAPGPIEDAFAASEIVEQAMVVGDGEKFIGALLVPNTEHIREW 586
Query: 405 AKRLSI-VHADASELSKEKTI 424
A I + DA L + +
Sbjct: 587 ADEEGIDLPGDAEALCDDDRV 607
>gi|332876876|ref|ZP_08444630.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332685159|gb|EGJ58002.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 597
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 127/414 (30%), Positives = 214/414 (51%), Gaps = 48/414 (11%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+ T +YTSGTTG PKGVMLT++NL +Q+ + ++ D LS LP HVYERA
Sbjct: 180 DLFTVIYTSGTTGEPKGVMLTYENLAYQMLGHSQRLEVDDTDSSLSFLPLTHVYERAWTS 239
Query: 86 FIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
F + I + Y NL ++ L +P M +VP YE +++ + + SS A+R++ +
Sbjct: 240 FCLYKAIVVYYLEDTNLVREALAEVRPTLMCAVPRFYEKIFATVHDKADASSFAKRMLFK 299
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
++ +R+ L ++PS+L L + +K+VY
Sbjct: 300 LAVKTG------RRV---LTLKEQNRKPSFL---------------LKKAYNFFDKMVYT 335
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K+++ +G K GG +L I F+++IG+ V++GYG+TE++ ++ L S
Sbjct: 336 KLKAVLGGRIKFMPCGGANLEPSIGRFFQSIGINVKLGYGMTETTATVSCWGDNRFNLQS 395
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
VG + + +++I E NE+L V+G VM+GY+KNP T +A DG+L TG
Sbjct: 396 VGTLMPNVQVRI--GEDNEIL---------VKGGMVMKGYYKNPEETAKAFTPDGFLRTG 444
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D G I +++ L + R K+ + S G+ + P +E + +LI QI VI
Sbjct: 445 DAGKIDENNN----------LFITERIKELMKTSNGKYIAPQLIEGKVGKYNLIEQIAVI 494
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK-EKTISLLYGELRKWTS 436
++ A+IVP+ E + A K L+I + + ++L K + I + +L+K+ S
Sbjct: 495 ADGKKFVSALIVPNYEILTQAFKDLNIKYKNTADLIKHSQVIEYIGKQLQKFQS 548
>gi|433592776|ref|YP_007282272.1| AMP-forming long-chain acyl-CoA synthetase [Natrinema pellirubrum
DSM 15624]
gi|448335221|ref|ZP_21524371.1| AMP-dependent synthetase and ligase [Natrinema pellirubrum DSM
15624]
gi|433307556|gb|AGB33368.1| AMP-forming long-chain acyl-CoA synthetase [Natrinema pellirubrum
DSM 15624]
gi|445617602|gb|ELY71196.1| AMP-dependent synthetase and ligase [Natrinema pellirubrum DSM
15624]
Length = 652
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 134/405 (33%), Positives = 200/405 (49%), Gaps = 60/405 (14%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI---RSLYDIVPAENGDK------ 68
+ + I DD+A+ +YTSGTTG PKGV LTH N + R + P ++ D
Sbjct: 199 RIDGIDLDDLASLIYTSGTTGKPKGVQLTHWNFRSNVNGSRKRFGPRPDKDDDVPVLDEE 258
Query: 69 --FLSMLPPWHVYERACGYF-IFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETL 124
+S LP HV+ER G+F +F+ G + Y + L++D QP SVP VYE +
Sbjct: 259 SVAMSYLPLAHVFERTAGHFALFAGGTCIAYAESPDTLQEDFSTVQPTTATSVPRVYEKI 318
Query: 125 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 184
Y GI+++ SS +RR+ A + AY A
Sbjct: 319 YDGIREEASGSSVSRRIFEWA-TDVGVAYQQ----------------------------A 349
Query: 185 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 243
IL LA+KLV+ ++ A+G + + +SGGGSL + Y A+G+ + GYG
Sbjct: 350 ASPGPILKAKQALADKLVFSTVREALGGNIEILISGGGSLSPELCRLYHAMGLPIFEGYG 409
Query: 244 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD---AETNEVLPAGSKGIVKVRGSQVM 300
LTE+SP++A P +G++G +++ E+K+ + + AG G + V G V
Sbjct: 410 LTETSPIVATNPPEGAKIGTIGPTLSNVEVKVDEAIADQDAFADDAGEVGELLVNGPNVT 469
Query: 301 QGYFKNPSATKQAL--DEDG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 356
QGY+ P AT+ A D+DG W TGDI + P G L R K IVL
Sbjct: 470 QGYWNKPGATEGAFTEDDDGTRWFRTGDIIHVRPD----------GYLEFRDRVKQIIVL 519
Query: 357 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 401
STG+NV P LE+A S ++ Q +V+G ++ GA++VP+ V
Sbjct: 520 STGKNVAPGPLEDAFAASEVVEQAMVVGDGEKFIGALLVPNTNHV 564
>gi|315504530|ref|YP_004083417.1| amp-dependent synthetase and ligase [Micromonospora sp. L5]
gi|315411149|gb|ADU09266.1| AMP-dependent synthetase and ligase [Micromonospora sp. L5]
Length = 600
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 123/380 (32%), Positives = 189/380 (49%), Gaps = 51/380 (13%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDKFLSMLPPWHVYER 81
+DD+AT +YTSGTTG PKG +LTH+N+ I + ++P G L LP H + R
Sbjct: 179 ADDVATIIYTSGTTGRPKGCVLTHRNIYSDIANAVPVLPNLFRQGASTLLFLPLAHAFAR 238
Query: 82 ACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
+ + + A +NL +LQ ++P +++SVP V+E +Y+G +Q S +
Sbjct: 239 LIQVGVVHARATMAHCADTKNLVAELQDFKPTFVLSVPRVFEKVYNG-ARQKAESEGKGK 297
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+ RA +++ A++ + + G L L H L +K
Sbjct: 298 IFDRAE-KVAIAWSEAQELPGGPGLG------------------------LRAQHALFDK 332
Query: 201 LVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LVY+K+++A+G + +SGG L + F+ +GV + GYGLTE+SP AA PT
Sbjct: 333 LVYRKLRAAMGGRCRDAISGGAPLGARLGHFFRGVGVTICEGYGLTETSPAAAANLPTGT 392
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
+G+VG P+ I+I D G V + G V QGY+ N +AT +A+ DGW
Sbjct: 393 RIGTVGRPLPGVTIRIDD-----------DGEVLIAGDIVFQGYWHNDAATAEAISTDGW 441
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
TGD+G + G L + GR K+ IV + G+NV P LE+ LI Q
Sbjct: 442 FRTGDLGHLDDD----------GYLSITGRKKEIIVTAGGKNVAPAVLEDQVRAHPLISQ 491
Query: 380 IVVIGQDQRRPGAIIVPDKE 399
VV+G Q A++ D+E
Sbjct: 492 CVVVGDRQPFIAALVTIDEE 511
>gi|289581785|ref|YP_003480251.1| AMP-dependent synthetase and ligase [Natrialba magadii ATCC 43099]
gi|448282809|ref|ZP_21474091.1| AMP-dependent synthetase and ligase [Natrialba magadii ATCC 43099]
gi|289531338|gb|ADD05689.1| AMP-dependent synthetase and ligase [Natrialba magadii ATCC 43099]
gi|445575424|gb|ELY29899.1| AMP-dependent synthetase and ligase [Natrialba magadii ATCC 43099]
Length = 672
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 133/412 (32%), Positives = 194/412 (47%), Gaps = 70/412 (16%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY----------DIVPAENGDKFL-SML 73
DD+A+ +YTSGTTG PKGVMLTH N + +Y D VP + D L S L
Sbjct: 208 DDLASIIYTSGTTGKPKGVMLTHGNFRTNVNQVYRRYGPRPDKDDDVPTIDQDSTLVSYL 267
Query: 74 PPWHVYERACGYFI-FSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P HV+ER G+F+ F+ G + Y + LK+D Q QP SVP VYE +Y I++Q
Sbjct: 268 PLAHVFERTAGHFLLFAAGATVAYAESSDTLKEDFQAVQPTGATSVPRVYEKIYDTIREQ 327
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
S R+ ++A + Y + P L
Sbjct: 328 ATESPVKERI-------FNWATDVSREYYRA-----DDPGPVLEFKLS------------ 363
Query: 192 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
+A+KLV+ K++ A+G + + VSGGGSL + Y +G+ + GYGLTE+SPV
Sbjct: 364 -----VADKLVFSKVKEALGGNIEMLVSGGGSLSPELCQLYHGMGLPIFEGYGLTETSPV 418
Query: 251 IAARRPTCNVLGSVGHPINHTEIKIVDA---ETNEVLPAGSKGIVKVRGSQVMQGYFKNP 307
+ P +G+VG I ++ + D+ + + G G + VRG V QGY+ P
Sbjct: 419 VTTNPPEEPKIGTVGPAIVDCDVTVDDSIVPDGDAASTPGETGELLVRGPNVTQGYWNKP 478
Query: 308 SATKQALDEDG--------------WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 353
AT +A E W TGDI I P G + R K
Sbjct: 479 EATDRAFTEHAPGVDEDDDGEDKGKWFRTGDIVTIRPD----------GYIEFHERTKQL 528
Query: 354 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 405
+VLSTG+NV P +E+A L+ Q +V+G ++ GA++VP+ + + AA
Sbjct: 529 VVLSTGKNVAPAPIEDAFASKELVEQCMVVGDSEKFVGALLVPNIDAIERAA 580
>gi|114321276|ref|YP_742959.1| AMP-dependent synthetase and ligase [Alkalilimnicola ehrlichii
MLHE-1]
gi|114227670|gb|ABI57469.1| AMP-dependent synthetase and ligase [Alkalilimnicola ehrlichii
MLHE-1]
Length = 620
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 120/372 (32%), Positives = 189/372 (50%), Gaps = 49/372 (13%)
Query: 27 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 86
+A+ VYTSG+TG PKGVML+H+N+L + + D FLS LP H ER GY+
Sbjct: 190 LASIVYTSGSTGRPKGVMLSHRNMLENAYAGLQRIAIYPDDLFLSFLPLSHTLERTIGYY 249
Query: 87 I-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
+ G + Y +V +L +DL ++P ++SVP +YE +Y IQ+ + S R +
Sbjct: 250 LPIMTGSTVAYARSVPDLPEDLATHRPTALVSVPRIYERVYGRIQEGLKAKSGLARALFH 309
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
+ +R+ + ++R +G C ++ + WP L +LV
Sbjct: 310 SAVRV--GWHRYQR-GQGLCGWHPRE-------------------LAWP---LLHRLVAG 344
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K+ + +G + +SGG L + + ++GV V GYGLTESSPVI+ N G+
Sbjct: 345 KVTARLGGRVRVAISGGAPLSREVAQLFLSLGVPVLEGYGLTESSPVISVNTLEDNRPGT 404
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
VG P+ E++I G +G + RG +M GY+ NP AT ALD DGWL+TG
Sbjct: 405 VGKPLPGVEVRI-----------GEQGELLARGPNIMLGYWNNPEATAAALDRDGWLHTG 453
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D + G + + GR K+ IV++ GE V P ++E A + Q++V+
Sbjct: 454 DQARLDDE----------GRITITGRLKEIIVMANGEKVPPADMELAIANDPVFEQVMVV 503
Query: 384 GQDQRRPGAIIV 395
G+ + GA++V
Sbjct: 504 GEGRPYLGALVV 515
>gi|300114859|ref|YP_003761434.1| AMP-dependent synthetase and ligase [Nitrosococcus watsonii C-113]
gi|299540796|gb|ADJ29113.1| AMP-dependent synthetase and ligase [Nitrosococcus watsonii C-113]
Length = 601
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 209/416 (50%), Gaps = 50/416 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
D +AT VYTSGTTG PKGVML+H N+L S P D FLS LP H ER G
Sbjct: 183 DALATIVYTSGTTGLPKGVMLSHHNILWNAHSSLHSTPVYEDDVFLSFLPLSHTLERTIG 242
Query: 85 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y++ G ++ YT ++ L +DL +P ++SVP ++E ++ QI+ + + +
Sbjct: 243 YYLPMMAGAQVAYTRSIAKLAEDLATVKPTVLVSVPRIFERTHN----QIYDTLQEKNPL 298
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
RAL R++ A G+ +Q +Y W +C L+ L +++V
Sbjct: 299 ERALFRLAVA--------AGW------RQFNYQQGHAPW---HPLCL----LNPLLQQIV 337
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
+++ + G + V GG L ++ A+G+ + GYGLTE+SPVI+ N
Sbjct: 338 GRQVLAQFGGRLRIVVCGGAPLAFNVAKELLALGLPLIQGYGLTETSPVISVNHLNNNDP 397
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
SVG P+ EI+I E NE+L S G VM GY+ NP AT + +DE GWL+
Sbjct: 398 KSVGTPLQDVEIRI--GEHNELL-GHSPG--------VMLGYWNNPKATAEVIDEKGWLH 446
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD ++R G L + GR K+ IVL+TGE + P E+E A SL Q++
Sbjct: 447 TGD-----------QARIEQGRLYITGRIKEIIVLATGEKIPPGEMETAISTDSLFDQVM 495
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 437
VIG+ + A+IV + E A+ L++ A L + + G + + T +
Sbjct: 496 VIGEGKPYLSALIVLNPEHWTTLAQELNLDPHQAQSLKHSTVLEEVLGRIEQHTRQ 551
>gi|121604076|ref|YP_981405.1| AMP-dependent synthetase and ligase [Polaromonas naphthalenivorans
CJ2]
gi|120593045|gb|ABM36484.1| AMP-dependent synthetase and ligase [Polaromonas naphthalenivorans
CJ2]
Length = 616
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 139/448 (31%), Positives = 222/448 (49%), Gaps = 47/448 (10%)
Query: 14 GKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSML 73
G + + D+++ VYTSGTTG PKGVMLTH+N++ + ++ + V GD FLS L
Sbjct: 172 GTAHAAQPPAEDELSAIVYTSGTTGKPKGVMLTHRNVVSNVLAILERVVPTAGDVFLSFL 231
Query: 74 PPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P H +ER GY++ + G + Y +V L +DL+ +P ++SVP +YE +++ + +
Sbjct: 232 PLSHTFERTAGYYLPLAVGSCVAYARSVALLAEDLKTVRPTVLVSVPRIYERVFARLHES 291
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRI-YEGFCLTRNQKQPSYLVALIDWLWARIICAI 190
+ S+ R+ + A + + + FC + Q P L A WA ++ +
Sbjct: 292 LAGSAFRTRL-----------FNAAQAVGWRRFC--KVQGLP--LAAGEGSAWA-MLDPL 335
Query: 191 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
LWP ++LV +K+++ G + VSGG L + + +GV + GYG+TE+SP
Sbjct: 336 LWPFL---DRLVARKLRAQFGGRVRVAVSGGAPLSHAVARCFLGLGVPLLQGYGMTETSP 392
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
V+AA N +VG + E++I D ++VRG VM+GY+K
Sbjct: 393 VVAANGVDDNDPATVGRALPGIEVRIGDNRE-----------LQVRGPSVMKGYWKRAED 441
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T + L DGWL+TGD I GR R + GR K+ IV STGE V P +LE
Sbjct: 442 TARVLTPDGWLSTGDQADI----QDGRIR-------IMGRIKEIIVTSTGEKVPPGDLEL 490
Query: 370 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYG 429
A L Q++V+G+++ G + V +K E A L + A+ LS+
Sbjct: 491 AIAVDPLFAQVMVVGENRPFIGCVAVVNKAEWQRLAASLGLDPIAAASLSQPAVRKAALA 550
Query: 430 ELRKWTSKCSFQIGP--IHVVDEPFTVN 455
+ T + P I + EP+T+
Sbjct: 551 RIAIQTRDFARYAAPRAIFLTLEPWTIE 578
>gi|448356483|ref|ZP_21545216.1| AMP-dependent synthetase and ligase [Natrialba chahannaoensis JCM
10990]
gi|445653516|gb|ELZ06387.1| AMP-dependent synthetase and ligase [Natrialba chahannaoensis JCM
10990]
Length = 674
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 134/414 (32%), Positives = 195/414 (47%), Gaps = 72/414 (17%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY----------DIVPAENGDKFL-SML 73
DD+A+ +YTSGTTG PKGVMLTH N + +Y D VP + D L S L
Sbjct: 208 DDLASIIYTSGTTGKPKGVMLTHGNFRTNVNQVYRRYGPRPDKDDDVPCIDQDSTLVSYL 267
Query: 74 PPWHVYERACGYFI-FSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P HV+ER G+F+ F+ G + Y + LK+D Q QP SVP VYE +Y I++Q
Sbjct: 268 PLAHVFERTAGHFLLFAAGATVAYAESSDTLKEDFQAVQPTGATSVPRVYEKIYDTIREQ 327
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
S R+ ++A + Y+ A AIL
Sbjct: 328 ATESPVKERI-------FNWATNVSREYYQ----------------------ADDPGAIL 358
Query: 192 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
+A+KLV+ K++ A+G + + VSGGGSL + Y +G+ + GYGLTE+SPV
Sbjct: 359 EFKLSVADKLVFSKVKEALGGNIEMLVSGGGSLSPELCQLYHGMGLPIFEGYGLTETSPV 418
Query: 251 IAARRPTCNVLGSVGHPINHTEIKIVDA---ETNEVLPAGSKGIVKVRGSQVMQGYFKNP 307
+ P +G+VG I ++ + D+ + + G G + VRG V QGY+ P
Sbjct: 419 VTTNPPEEPKIGTVGPAIVDCDVTVDDSIVPDGDATSTPGETGELLVRGPNVTQGYWNKP 478
Query: 308 SATKQALDEDG----------------WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 351
AT +A E W TGDI I P + R K
Sbjct: 479 EATDRAFTEHAPGVDEDEDGDSEDKGKWFRTGDIVTIRPDD----------YIEFHERTK 528
Query: 352 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 405
+VLSTG+NV P +E+A L+ Q +V+G ++ GA++VP+ + + AA
Sbjct: 529 QLVVLSTGKNVAPAPIEDAFASKGLVEQCMVVGDGEKFVGALLVPNIDAIERAA 582
>gi|383620428|ref|ZP_09946834.1| AMP-dependent synthetase and ligase [Halobiforma lacisalsi AJ5]
gi|448697789|ref|ZP_21698667.1| AMP-dependent synthetase and ligase [Halobiforma lacisalsi AJ5]
gi|445781155|gb|EMA32016.1| AMP-dependent synthetase and ligase [Halobiforma lacisalsi AJ5]
Length = 647
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 126/410 (30%), Positives = 199/410 (48%), Gaps = 55/410 (13%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY----------DIVPA-ENGDKFLSM 72
+DD+A+ +YTSGTTG PKGV LTH N + L D +P+ + + +S
Sbjct: 205 TDDLASLIYTSGTTGQPKGVKLTHWNFRANVNQLRKRMAPRPDRPDDLPSIDESAQTVSY 264
Query: 73 LPPWHVYERACGYF-IFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQK 130
LP HV+ER G+F IF+ G + Y + L++D P+ SVP VYE +Y I++
Sbjct: 265 LPLAHVFERTAGHFLIFASGGCVAYAEDPDTLQEDFSAVGPNVATSVPRVYEKIYDAIRE 324
Query: 131 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 190
Q S +R+ A +D+ +
Sbjct: 325 QASESPVKKRIFEWATD-----------------------------VGVDYQETDDPGPV 355
Query: 191 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
L LA++LV+ ++ A+G + +SGGGSL + Y A+G+ + GYGLTE++P
Sbjct: 356 LSAKQALADRLVFSTVREALGGEIEMLISGGGSLSPELCTLYHAMGLPIYEGYGLTETAP 415
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNE--VLPAGSKGIVKVRGSQVMQGYFKNP 307
V+A P +G++G + E+++ ++ N+ G G + V G V GY++ P
Sbjct: 416 VLAVNPPEEPKIGTIGPALPDVELRVDESVANQDAFDDPGEVGELVVTGPNVTDGYWEKP 475
Query: 308 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 367
SAT +A EDGW TGDI + P G + R K +VLSTG+NV P +
Sbjct: 476 SATDRAFTEDGWFRTGDIVHLRPD----------GYIEFRDRVKQILVLSTGKNVAPGPI 525
Query: 368 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 417
E+A S ++ Q +V+G +++ GA++VP+ + + A I D E
Sbjct: 526 EDAFAASEVVEQAMVVGDNEKFVGALLVPNTDHIREWADEEGIDLPDDPE 575
>gi|448584787|ref|ZP_21647530.1| acyl-CoA synthetase [Haloferax gibbonsii ATCC 33959]
gi|445727641|gb|ELZ79251.1| acyl-CoA synthetase [Haloferax gibbonsii ATCC 33959]
Length = 666
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/391 (32%), Positives = 189/391 (48%), Gaps = 58/391 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDK--------FLSMLP 74
+D+A+ +YTSGTTG PKGV LTH N + Y + GD LS LP
Sbjct: 207 EDLASLIYTSGTTGQPKGVQLTHWNFRSNVNESYRRFGPRPDKGDTPVIGPDSVALSFLP 266
Query: 75 PWHVYERACGYFIF--SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
HV+ER G+F+ + + L++D Q +P SVP VYE LY I+ Q
Sbjct: 267 LAHVFERMAGHFMMFAAGAAVAYAESPDTLREDFQLVRPTTGTSVPRVYEKLYDAIRAQA 326
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
S A +R+ A + + AY P YL L
Sbjct: 327 SESPAKKRIFEWA-VGVGQAY-------------HTTDAPGYL---------------LT 357
Query: 193 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
H LA++LV+ +++ A+G + +SGGGSL + Y A+G+ + GYGLTE+SPVI
Sbjct: 358 AKHRLADRLVFGQVREALGDNLDFFISGGGSLSAELCALYHAMGLPIYEGYGLTETSPVI 417
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYFKNPSA 309
+ P +G++G+P+ + E K+ + L G G + VRGS V +GY+ NP
Sbjct: 418 SVNPPEEPKIGTIGYPLRNVETKLDTTVVGDQLGDAGGEVGELLVRGSSVTEGYWNNPEE 477
Query: 310 TKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 365
T+ A ED W TGD+ + P G + RAK +VLSTG+NV P
Sbjct: 478 TEAAFVEDDEGERWFRTGDVVELRPD----------GYITFRERAKQILVLSTGKNVAPG 527
Query: 366 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 396
+E+A S ++ Q +V+G ++ A+IVP
Sbjct: 528 PIEDAFASSPVVEQCMVLGDGRKFVSALIVP 558
>gi|448620307|ref|ZP_21667655.1| acyl-CoA synthetase [Haloferax denitrificans ATCC 35960]
gi|445757095|gb|EMA08451.1| acyl-CoA synthetase [Haloferax denitrificans ATCC 35960]
Length = 668
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/391 (33%), Positives = 192/391 (49%), Gaps = 58/391 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV--PAENGDK--------FLSMLP 74
+D+A+ +YTSGTTG PKGV LTH N + Y + GD LS LP
Sbjct: 207 EDLASLIYTSGTTGRPKGVRLTHWNFRSNVNESYRRFGPRPDKGDTPVIGPDAVTLSFLP 266
Query: 75 PWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
HV+ER G+F+ F+ G + Y + L++D Q +P SVP VYE LY I+ Q
Sbjct: 267 LAHVFERMAGHFMMFAAGATVAYAESPDTLREDFQLARPTVGTSVPRVYEKLYDAIRTQA 326
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
S A +RV A + + AY P YL++
Sbjct: 327 SESPAKKRVFEWA-VGVGQAY-------------HTTDAPGYLLSA-------------- 358
Query: 193 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
H LA++LV+ +++ A+G + +SGGGSL + Y A+G+ + GYGLTE+SPVI
Sbjct: 359 -KHRLADRLVFGQVREALGDNIDFFISGGGSLSAELCALYHAMGLPIYEGYGLTETSPVI 417
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYFKNPSA 309
+ P +G++G+P+ E ++ + L G G + VRG V +GY+ +P
Sbjct: 418 SVNPPEEPKIGTIGYPLRTVETELDATVVGDRLGDAGGEVGELLVRGPSVTEGYWNDPEE 477
Query: 310 TKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 365
T+ A ED W TGD+ RR G + RAK +VLSTG+NV P
Sbjct: 478 TEAAFVEDDEGERWFRTGDV----------VERRPDGYIAFRERAKQILVLSTGKNVAPG 527
Query: 366 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 396
+E+A S ++ Q +V+G ++ A+IVP
Sbjct: 528 PIEDAFASSPVVEQCMVLGDGRKFVSALIVP 558
>gi|374597993|ref|ZP_09670995.1| AMP-dependent synthetase and ligase [Myroides odoratus DSM 2801]
gi|423323671|ref|ZP_17301513.1| hypothetical protein HMPREF9716_00870 [Myroides odoratimimus CIP
103059]
gi|373909463|gb|EHQ41312.1| AMP-dependent synthetase and ligase [Myroides odoratus DSM 2801]
gi|404609198|gb|EKB08594.1| hypothetical protein HMPREF9716_00870 [Myroides odoratimimus CIP
103059]
Length = 591
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 140/440 (31%), Positives = 212/440 (48%), Gaps = 76/440 (17%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP--AENGDKFLSMLPPWHVYERA 82
DD+AT +YTSGTTG PKGVML+H N+L + + VP E K LS LP HV+ER
Sbjct: 173 DDLATLIYTSGTTGKPKGVMLSHNNILSNVLGSSERVPFTREQHFKALSFLPLCHVFERM 232
Query: 83 CGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y G+ + Y ++ + ++++ +P+ M VP + E +Y +IF + +A
Sbjct: 233 LIYLYQYSGVGIYYAESIDKMGENMKEVKPNVMTVVPRLLEKVYD----KIFATGSALTG 288
Query: 142 VARAL----IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL- 196
+ +++ + + F Y + R GF + L L
Sbjct: 289 IKKSIFFWALELGFKYQPYNR---GF---------------------------FYNLQLG 318
Query: 197 LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA-- 253
+A KLV+KK Q A+G K VSG +L + + A G+ V GYGLTE+SPVIA
Sbjct: 319 IARKLVFKKWQEALGGEMKIIVSGSAALQPRLSRVFNAAGIPVMEGYGLTETSPVIAVND 378
Query: 254 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 313
R +G+VG P+++ +KI AE E+L +G VM GY+K+ TK+
Sbjct: 379 ERNKSMKIGTVGKPLSNVVVKI--AEDGEIL---------CKGPNVMLGYYKDEERTKEE 427
Query: 314 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 373
L +DG+ +TGDIG I G L + R K+ S G+ V P +E +
Sbjct: 428 L-KDGYFHTGDIGTIDEE----------GFLKITDRKKEMFKTSGGKYVAPQIIENTLKQ 476
Query: 374 SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE---------LSKEKTI 424
S I QI+VIG+ ++ P A+I P+ E V AKR +I + +E EK +
Sbjct: 477 SRFIEQIMVIGEGEKMPAALIQPNFEFVREWAKRKNIALGNTNEELIQNEQVRQRIEKEV 536
Query: 425 SLLYGELRKWTSKCSFQIGP 444
+ + KW F++ P
Sbjct: 537 EFVNRKFGKWEQVKKFELTP 556
>gi|346226769|ref|ZP_08847911.1| amp-dependent synthetase and ligase [Anaerophaga thermohalophila
DSM 12881]
Length = 639
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/397 (31%), Positives = 199/397 (50%), Gaps = 48/397 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+DIA YTSGTT PKG+ML+H+N + + + + L +LP H +
Sbjct: 175 NDIANISYTSGTTARPKGIMLSHRNYTANVEQAFSYIDIPAHYRTLVVLPWDHAFAHTAA 234
Query: 85 YFIFS-RG-----IELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQKQIFTS 135
+ F RG +E T + LK+ ++ QPH ++SVP + + I+K +
Sbjct: 235 LYAFMYRGASIASVEAGKTQIETLKNFASNILEIQPHVLMSVPAIAKNFRKNIEKGVM-- 292
Query: 136 SAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLH 195
A+ A L +I+ Y + Y G R + + + +PL+
Sbjct: 293 --AKGKTANTLFKIAMKYAIW---YNGTGNNR----------------GKGLKKLTYPLY 331
Query: 196 LLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGYGLTESSPVIAA 253
L + +++K I+S G + GGG+L + IDL F+ A+G+ + GYGL+E++P+I+A
Sbjct: 332 QLFDNILFKTIRSGFGGNLQFFIGGGAL-LDIDLQKFFYALGIPMYQGYGLSEAAPIISA 390
Query: 254 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 313
P + +GS G +N+ EIKI D E NE LP G G + V+G VM GY+KN ATK+
Sbjct: 391 NTPDHHKMGSSGRVVNNLEIKICDEEGNE-LPNGRSGEIVVKGENVMPGYWKNEEATKET 449
Query: 314 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL- 372
+ +DGWL TGD+G++ G L + GR K ++ S GE P +EEA +
Sbjct: 450 I-KDGWLYTGDLGYLDHE----------GYLYVLGRFKSLLIGSDGEKYSPEGIEEAVID 498
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 409
LI Q V+ +IVP++E+++ K L
Sbjct: 499 HCPLIDQFVLHNNQNPYTVGLIVPNQEKIIQFFKSLD 535
>gi|336253150|ref|YP_004596257.1| Long-chain-fatty-acid--CoA ligase [Halopiger xanaduensis SH-6]
gi|335337139|gb|AEH36378.1| Long-chain-fatty-acid--CoA ligase [Halopiger xanaduensis SH-6]
Length = 666
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 134/426 (31%), Positives = 203/426 (47%), Gaps = 72/426 (16%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY----------DIVPA-ENGDKFLSML 73
DD+A+ +YTSGTTG PKGV LTH+N + ++ D VP + + +S L
Sbjct: 208 DDLASLIYTSGTTGKPKGVRLTHRNFRSNVNQVHRRFAPRPDRDDDVPTLDETSRAVSYL 267
Query: 74 PPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P HV+ER G+F+ F+ G + Y + L++D +P SVP VYE +Y I++Q
Sbjct: 268 PLAHVFERTAGHFVLFATGASVAYAESPDTLQEDFSLVEPTTATSVPRVYEKIYDRIREQ 327
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
S A +R+ A + AY + +P L L
Sbjct: 328 ASESPAKKRIFEWA-TDVGVAY-------------QETDEPGPL---------------L 358
Query: 192 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
LA+KLV+ ++ A+G + + +SGGGSL + Y A+G+ + GYGLTE+SPV
Sbjct: 359 RAKRTLADKLVFSTVREALGGNIELLISGGGSLSPELCQLYHAMGLPIHEGYGLTETSPV 418
Query: 251 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA---GSKGIVKVRGSQVMQGYFKNP 307
I+ P +G++G P+ EI I ++ ++ A G G + VRG V +GY+ P
Sbjct: 419 ISVNPPGEVKIGTIGPPVVDVEIAIDESVADQAAFADDPGEVGELLVRGPNVTRGYWNKP 478
Query: 308 SATKQALDED----------------GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 351
AT ++ +D W TGD+ RR L RAK
Sbjct: 479 GATDRSFTDDIGESEATVMADGEASGQWFRTGDV----------VHRRPDDYLEFRDRAK 528
Query: 352 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 411
+VLSTG+NV P +E+ + S ++ Q +V+G ++ GA+IVP+ V A R I
Sbjct: 529 QILVLSTGKNVAPAPIEDRFVSSEVVEQCMVVGDGEKFVGALIVPNTAHVREWADREGID 588
Query: 412 HADASE 417
D E
Sbjct: 589 LPDDPE 594
>gi|383758879|ref|YP_005437864.1| AMP-dependent synthetase and ligase [Rubrivivax gelatinosus IL144]
gi|381379548|dbj|BAL96365.1| AMP-dependent synthetase and ligase [Rubrivivax gelatinosus IL144]
Length = 608
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/400 (31%), Positives = 204/400 (51%), Gaps = 47/400 (11%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+G +D+A VYTSGTTG PKGVMLTH+N++ ++++ + D FLS LP H +ER
Sbjct: 185 VGEEDLAALVYTSGTTGKPKGVMLTHRNVMANVKAVLARIAPRPDDVFLSFLPLSHTFER 244
Query: 82 ACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
GY++ + G + + + ++L +D++ +P +ISVP +YE ++ +Q + S+ +
Sbjct: 245 TAGYYLPIAAGSTVAFARSTQHLPEDMKTVRPTVLISVPRIYERVFVKLQTMLEGSALKK 304
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
R+ A ++R FC + P + A D A++WP LLA
Sbjct: 305 RLFDMA------QAVGWRR----FCREQKLPVPGSVPAAWD--------ALVWP--LLAS 344
Query: 200 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
+ V +Q+ G + VSGG +L I + +G+ + GYG+TES+PVI+ P
Sbjct: 345 R-VSAPLQAQFGGRLRLAVSGGAALSAPIARCFLGLGLPIVQGYGMTESTPVISCNTPED 403
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
N +VG P++ E++I D E+L VRG+ VM+GY+ P T +AL E G
Sbjct: 404 NDPATVGRPLDGVEVRIGD--NRELL---------VRGANVMRGYWNRPEDTARAL-EGG 451
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
WL+TGD ++ GG + + GR K+ IV +TGE + P +LE A + L
Sbjct: 452 WLHTGD-----------QASLDGGRIRIVGRVKEIIVTATGEKIAPTDLEMAIVADPLFE 500
Query: 379 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 418
G ++ ++V A+ L + AD + L
Sbjct: 501 SAWAFGDNRPFIACVVVLAAGPWERLARSLGLDPADPASL 540
>gi|256820350|ref|YP_003141629.1| AMP-dependent synthetase and ligase [Capnocytophaga ochracea DSM
7271]
gi|256581933|gb|ACU93068.1| AMP-dependent synthetase and ligase [Capnocytophaga ochracea DSM
7271]
Length = 599
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/414 (31%), Positives = 216/414 (52%), Gaps = 49/414 (11%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHVYERAC 83
DD+ T +YTSGTTG PKGVMLT++NL Q+ + + +N D L+ LP HV+ERA
Sbjct: 180 DDLFTIIYTSGTTGEPKGVMLTYENLAFQMVGHTERLSTVDNTDTSLAFLPLSHVFERAW 239
Query: 84 GYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
YF + + + Y NL ++ L +P M +VP YE +++ + + SS V
Sbjct: 240 TYFCLYKAVTVYYLDDTNLVREALAEVRPTLMCAVPRFYEKIFATVHDRADASS----FV 295
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
R L R++ A KR+ L K+PS+ +L + L +K+V
Sbjct: 296 KRKLFRLAIA--TGKRV---LALREQGKKPSF---------------VLQKAYNLFDKMV 335
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
YKK++ A+G K GG +L I F+++IG+ +++GYG+TE++ I+
Sbjct: 336 YKKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINLKLGYGMTETTATISCWGDDRINP 395
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
SVG+ + + +++I E NE+L V+G VM+GY+KNP T +A DG+L
Sbjct: 396 QSVGNVMPNVQVRI--GEENEIL---------VKGGMVMKGYYKNPEETAKAFTPDGYLR 444
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD G + +++ L + R K+ + S G+ + P +E + +LI QI
Sbjct: 445 TGDAGNLDGNNN----------LFITERIKELMKTSNGKYIAPQMIEGKVGKYNLIEQIA 494
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKW 434
VI ++ A+IVP+ E + A K L++ + + +++ K + I + +L+K+
Sbjct: 495 VIADGKKFVSALIVPNYEMLSQALKDLNLKYKNTADMIKHSQVIEYIGKQLQKF 548
>gi|407693103|ref|YP_006817892.1| FAA1 protein [Actinobacillus suis H91-0380]
gi|407389160|gb|AFU19653.1| FAA1 protein [Actinobacillus suis H91-0380]
Length = 592
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 140/436 (32%), Positives = 209/436 (47%), Gaps = 66/436 (15%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENG--DKFLSMLPPWHV 78
+I DD+ T +YTSGTTG PKGVML NL HQ+++ +D+ E G D LS LP H+
Sbjct: 177 SIQLDDLFTIIYTSGTTGTPKGVMLDFSNLAHQLQA-HDLALPEVGPDDVSLSFLPFSHI 235
Query: 79 YERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
+ERA ++ +G + Y N ++ L +P M +VP ++E +YS I ++ +
Sbjct: 236 FERAWVAYLLHKGATVCYLEDTNEVRTALAEVKPTLMCAVPRLFEKMYSAIFDKVKQAPF 295
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
RR + R ++ +G QK A L + L
Sbjct: 296 HRRALFRWALK------------QGKTFVHTQK------------------ATL--AYKL 323
Query: 198 AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 256
A KLV K+++ +G + K GG L I F+ +IGV V++GYG+TE++ ++
Sbjct: 324 ANKLVLTKLRALLGGNIKMMPCGGAKLEPAIGEFFHSIGVNVKLGYGMTETTATVSCWTD 383
Query: 257 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 316
L S+G + + E+KI E NE+L VRG VM+GY+KNP T +A E
Sbjct: 384 RNFALNSIGTLMPNAEVKI--GEDNEIL---------VRGGMVMKGYYKNPEETAKAFTE 432
Query: 317 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 376
DG+L TGD G + H G L + R K+ + S G+ + P +E +
Sbjct: 433 DGFLRTGDAGALDEH----------GNLYITDRIKELMKTSNGKYIAPQYIEGKLAKDKF 482
Query: 377 IRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLY 428
I QI VI ++ A+IVP E + AK+L+I + D EL K EK I L
Sbjct: 483 IEQIAVIADTKKYVSALIVPSFEALEEYAKQLNIRYHDRLELIKHSAVIQLFEKRIEELQ 542
Query: 429 GELRKWTSKCSFQIGP 444
EL + F + P
Sbjct: 543 QELAHFEQIKKFTLLP 558
>gi|441505110|ref|ZP_20987100.1| Long-chain-fatty-acid--CoA ligase [Photobacterium sp. AK15]
gi|441427211|gb|ELR64683.1| Long-chain-fatty-acid--CoA ligase [Photobacterium sp. AK15]
Length = 607
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/405 (32%), Positives = 198/405 (48%), Gaps = 47/405 (11%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+ T +YTSGTTG PKGVML + N+ QI + + + GD L LP HV+ERA
Sbjct: 178 DDLFTLIYTSGTTGTPKGVMLDYGNVAGQIEGHDEKLALDEGDVSLCFLPLSHVFERAWT 237
Query: 85 YFIFSR-GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
++ R G+ + L++ L +P+ M +VP VYE +YS + +++ + R+V+
Sbjct: 238 FYALHRGGVNCYLSDTNKLREALVEVKPNVMAAVPRVYEKIYSAVHEKVSRAPFHRKVM- 296
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
++A R+ C + Q++PS L L + LA+KLV
Sbjct: 297 -----FTWAVNMGARM--ALC-HQEQRKPSLL---------------LKKSYKLADKLVL 333
Query: 204 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K++ +G K GG L I F+ AIG+ V++GYG+TE++ I+ C
Sbjct: 334 SKLRKILGGQIKFMPCGGAKLDAGIGRFFHAIGINVKLGYGMTETTATISCWDDECFNPD 393
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G P+ E+KI E NE+L VRG VM+GY+K P + + EDG+L T
Sbjct: 394 SIGLPMPGAEVKI--GENNEIL---------VRGPMVMRGYYKMPEESAKNFTEDGFLKT 442
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD G G L + R K+ + S G+ + P +E A + I QI V
Sbjct: 443 GDAGHFDDK----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAV 492
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLL 427
I ++ A+IVP E + A+ L+I + D EL K I L
Sbjct: 493 IADTRKFVSALIVPCFEALEEHARELNIKYHDRLELVKHSQIREL 537
>gi|76802721|ref|YP_330816.1| long-chain-fatty-acid--CoA ligase [Natronomonas pharaonis DSM 2160]
gi|76558586|emb|CAI50178.1| acyl-CoA synthetase [Natronomonas pharaonis DSM 2160]
Length = 651
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/410 (31%), Positives = 199/410 (48%), Gaps = 61/410 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY-----------DIVPAENGDKFLSML 73
DD+A+ +YTSGTTG PKGV LTH+N + L D+ + D+ LS L
Sbjct: 211 DDLASLIYTSGTTGKPKGVQLTHRNFRSNVNGLRKRFAPRPDKDEDLPAIDERDRVLSFL 270
Query: 74 PPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P HV+ER G+F+ F G + Y + + DD+Q +P SVP VYE +Y ++ +
Sbjct: 271 PLAHVFERVAGHFLMFGSGATVSYAESTDTVADDIQIVKPTGASSVPRVYERIYDSLRDE 330
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
A V RA + I+ + N + P + L
Sbjct: 331 -----APEAVFNRA-VPIARQWA-------------NTESPGLGLKL------------- 358
Query: 192 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
+ L +KLVY ++ +G + + VSGGGSL + ++ +G+ + GYGLTE+SPV
Sbjct: 359 --KYKLMDKLVYSSVREQMGGNIEFFVSGGGSLSKQLAELFDGMGIPILEGYGLTETSPV 416
Query: 251 IAARRPTCNVLGSVGHPINHTEIKI---VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNP 307
++ P G++G P+++ E+++ V ++ + G G + V+G V +GY+ P
Sbjct: 417 VSVNPPEDYRSGTLGPPLSNVEVRLDETVVSDDQKANADGDIGELHVKGPNVTEGYWNRP 476
Query: 308 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 367
AT++A +DGW TGDI + L+ R K IVL TG+N+ P +
Sbjct: 477 GATEEAFTQDGWFRTGDI----------IEQTDDDYLIYHDRLKQLIVLDTGKNIAPQPI 526
Query: 368 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 417
E+ S I Q +VIG +Q+ A+ VP+ E V A + I D SE
Sbjct: 527 EDEFATSERIDQAMVIGDNQKFIAALFVPNLEAVERWADKEGIDLPDDSE 576
>gi|333029389|ref|ZP_08457450.1| Long-chain-fatty-acid--CoA ligase [Bacteroides coprosuis DSM 18011]
gi|332739986|gb|EGJ70468.1| Long-chain-fatty-acid--CoA ligase [Bacteroides coprosuis DSM 18011]
Length = 601
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/437 (29%), Positives = 212/437 (48%), Gaps = 54/437 (12%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD--IVPAENGDKFLSMLPPWHVYERAC 83
D+A +YTSGTTG PKGVML H N L IR ++D +V + D L+ LP HV+ER
Sbjct: 181 DLANILYTSGTTGEPKGVMLHHSNYLEAIR-IHDLRLVDITDKDISLNFLPLTHVFERGW 239
Query: 84 GYFIFSRGIELMYTAV-RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y SRG+++ V ++++ ++ +P M SVP +E +Y G++ +I +S + +
Sbjct: 240 VYICVSRGVQVCINLVPQDIQIAIKEIRPTLMCSVPRFWEKVYLGVKDKIDNTSGPMKQL 299
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
+++ + R K+P ++ L + EK V
Sbjct: 300 MLNAVKVGREH--------NLNYIRLGKKPPRMLHL---------------KYKFYEKTV 336
Query: 203 YKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
+ ++ IGI + G +LP+ + F A+G+ V GYGLTES+ ++ T
Sbjct: 337 MQLLKKTIGIENGNFFPTAGAALPVEVAEFVYAVGINVITGYGLTESTATVSCTWKTHFQ 396
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
+GSVG +++ ++KI D +E+L ++G + QGY+K P AT QA DGW
Sbjct: 397 IGSVGQVLDNVQVKIGDE--SEIL---------LKGKTITQGYYKKPDATAQAFTADGWF 445
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
+TGDIG++ G L + GR KD S G+ + P LE + I QI
Sbjct: 446 HTGDIGYMK-----------DGELYMTGRLKDLFKTSNGKYIAPQALETRLVIDQFIDQI 494
Query: 381 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKWTSKCS 439
+I ++ A+IVP +V AK I +A+ EL I +Y G + + +
Sbjct: 495 ALIADQRKFVSALIVPVYSKVEEYAKEHGIQYANLDELLTHPQILQMYKGRIDTLQQQFA 554
Query: 440 F--QIGPIHVVDEPFTV 454
+ QI ++ EPF++
Sbjct: 555 YYEQIKHFTLLKEPFSM 571
>gi|429757066|ref|ZP_19289623.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 324 str. F0483]
gi|429169713|gb|EKY11454.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 324 str. F0483]
Length = 599
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/414 (31%), Positives = 215/414 (51%), Gaps = 49/414 (11%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHVYERAC 83
DD+ T +YTSGTTG PKGVMLT++NL Q+ + + +N D L+ LP HV+ERA
Sbjct: 180 DDLFTIIYTSGTTGEPKGVMLTYENLAFQMVGHTERLSTVDNTDTSLAFLPLSHVFERAW 239
Query: 84 GYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
YF + I + Y NL ++ L +P M +VP YE +++ + + SS V
Sbjct: 240 TYFCLYKAITVYYLDDTNLVREALAEVRPTLMCAVPRFYEKIFATVHDRADASS----FV 295
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
R L R++ A KR+ L K+PS+ +L + L +K+V
Sbjct: 296 KRKLFRLAIA--TGKRV---LALREQGKKPSF---------------VLQKAYNLFDKMV 335
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
YKK++ A+G K GG +L I F+++IG+ +++GYG+TE++ I+
Sbjct: 336 YKKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINLKLGYGMTETTATISCWGDDRINP 395
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
SVG+ + + +++I E NE+L V+G VM+GY+KNP T +A DG+L
Sbjct: 396 QSVGNVMPNVQVRI--GEENEIL---------VKGGMVMKGYYKNPEETAKAFTPDGYLR 444
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD G + +++ L + R K+ + S G+ + P +E + +LI QI
Sbjct: 445 TGDAGNLDGNNN----------LFITERIKELMKTSNGKYIAPQMIEGKVGKYNLIEQIA 494
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKW 434
VI ++ A+IVP+ E + A K L+I + +++ K + I + +L+K+
Sbjct: 495 VIADGKKFVSALIVPNYEMLSQALKDLNIKCKNTADMIKHSQVIEYIGKQLQKF 548
>gi|420151040|ref|ZP_14658193.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 335 str. F0486]
gi|394751223|gb|EJF35022.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 335 str. F0486]
Length = 599
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/414 (31%), Positives = 216/414 (52%), Gaps = 49/414 (11%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHVYERAC 83
DD+ T +YTSGTTG PKGVMLT++NL Q+ + + +N D L+ LP HV+ERA
Sbjct: 180 DDLFTIIYTSGTTGEPKGVMLTYENLAFQMVGHTERLSTVDNTDTSLAFLPLSHVFERAW 239
Query: 84 GYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
YF + + + Y NL ++ L +P M +VP YE +++ + + SS V
Sbjct: 240 TYFCLYKAVTVYYLDDTNLVREALAEVRPTLMCAVPRFYEKIFATVHDRADASS----FV 295
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
R L R++ A KR+ L K+PS+ +L + L +K+V
Sbjct: 296 KRKLFRLAIA--TGKRV---LALREQGKKPSF---------------VLQKAYNLFDKMV 335
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
YKK++ A+G K GG +L I F+++IG+ +++GYG+TE++ I+
Sbjct: 336 YKKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINLKLGYGMTETTATISCWGDDRINP 395
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
SVG+ + + +++I E NE+L V+G VM+GY+KNP T +A DG+L
Sbjct: 396 QSVGNVMPNVQVRI--GEENEIL---------VKGGMVMKGYYKNPEETAKAFTPDGYLR 444
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD G + +++ L + R K+ + S G+ + P +E + +LI QI
Sbjct: 445 TGDAGNLDGNNN----------LFITERIKELMKTSNGKYIAPQMIEGKVGKYNLIEQIA 494
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKW 434
VI ++ A+IVP+ E + A K L++ + + +++ K + I + +L+K+
Sbjct: 495 VIADGKKFVSALIVPNYEMLSQALKDLNLKYKNTADMIKHSQVIEYIGKQLQKF 548
>gi|330469354|ref|YP_004407097.1| AMP-dependent synthetase and ligase [Verrucosispora maris
AB-18-032]
gi|328812325|gb|AEB46497.1| AMP-dependent synthetase and ligase [Verrucosispora maris
AB-18-032]
Length = 618
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/381 (33%), Positives = 186/381 (48%), Gaps = 53/381 (13%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP---AENGDKFLSMLPPWHVYE 80
S DIAT +YTSGTTG PKG +LTH+N+ I + ++P N L LP H +
Sbjct: 197 SVDIATIIYTSGTTGRPKGCVLTHRNMYSDIANAVPVLPNLFGPNASTLL-FLPLAHAFA 255
Query: 81 RACGYFIF-SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
R + +R + V+NL +LQ +P +++SVP V+E +Y+G KQ ++
Sbjct: 256 RLIQIGVVQARATMAHCSDVKNLVPELQEIKPTFVLSVPRVFEKVYNG-AKQKAEAAGKG 314
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
++ ARA ++ AY+ G L L H L +
Sbjct: 315 KIFARAEA-VAIAYSEALETSAGPGLA------------------------LRVQHALFD 349
Query: 200 KLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
KLVY K+++A+G + +SGG L + F+ +GV V GYGLTE+SP +A P
Sbjct: 350 KLVYGKLRAALGGRCRDAISGGAPLGARLGHFFRGVGVPVCEGYGLTETSPAASANLPGF 409
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
+G+VG P+ I+I D G V + G V QGY++N AT +A+ DG
Sbjct: 410 TRIGTVGRPLPGVTIRIAD-----------DGEVLIAGDIVFQGYWRNDEATAEAISSDG 458
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
W TGD+G S G L + GR K+ IV ++G+NV P LE+ LI
Sbjct: 459 WFRTGDLG----------SLDGDGYLTITGRKKEIIVTASGKNVAPAVLEDQVRAHQLIS 508
Query: 379 QIVVIGQDQRRPGAIIVPDKE 399
Q VV+G Q A+I D+E
Sbjct: 509 QCVVVGDRQPFIAALITLDEE 529
>gi|417321242|ref|ZP_12107782.1| putative long-chain-fatty-acid-CoA ligase [Vibrio parahaemolyticus
10329]
gi|328471922|gb|EGF42799.1| putative long-chain-fatty-acid-CoA ligase [Vibrio parahaemolyticus
10329]
Length = 602
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/437 (30%), Positives = 207/437 (47%), Gaps = 55/437 (12%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ E DD+ T +YTSGTTG PKGVML + N+ Q+ + GD L LP H
Sbjct: 171 RLEQAKVDDLLTLIYTSGTTGQPKGVMLDYGNIAAQLEGHDQRLSLSQGDVSLCFLPLSH 230
Query: 78 VYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ERA +++ +G Y ++D L +P M +VP YE ++S I +++ +
Sbjct: 231 VFERAWTFYVLYKGATNCYLQDTMQVRDALSEVRPTVMCAVPRFYEKIFSAIHEKVSRAP 290
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
R+++ F + C + +++PS + L H
Sbjct: 291 IHRKIM--------FTWAVNMGAKMALC-HQEKRKPSMM---------------LRKAHA 326
Query: 197 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ I+
Sbjct: 327 LADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATISCWD 386
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
C S+G + ++KI E NE+L VRG VM+GY+K P T++ D
Sbjct: 387 DKCFDPDSIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETEKTFD 435
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
E G+L TGD G I + G L + R K+ + S G+ + P +E A +
Sbjct: 436 EHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQMIEGAIGKDH 485
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLL 427
I QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 486 FIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIAYHDRVELIKHHQVVEMLEKRVNEL 545
Query: 428 YGELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 546 QKELAKFEQVKKFKLLP 562
>gi|429747308|ref|ZP_19280584.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 380 str. F0488]
gi|429163446|gb|EKY05672.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 380 str. F0488]
Length = 599
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/414 (31%), Positives = 215/414 (51%), Gaps = 49/414 (11%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHVYERAC 83
DD+ T +YTSGTTG PKGVMLT++NL Q+ + + +N D L+ LP HV+ERA
Sbjct: 180 DDLFTIIYTSGTTGEPKGVMLTYQNLAFQMVGHTERLSTVDNTDTSLAFLPLSHVFERAW 239
Query: 84 GYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
YF + + + Y NL ++ L +P M +VP YE +++ + + SS V
Sbjct: 240 TYFCLYKAVTVYYLDDTNLVREALAEVRPTLMCAVPRFYEKIFATVHDRADASS----FV 295
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
R L R++ A KR+ L K+PS+ +L + L +K+V
Sbjct: 296 KRKLFRLAIA--TGKRV---LALREQGKKPSF---------------VLQKAYNLFDKMV 335
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
YKK++ A+G K GG +L I F+++IG+ +++GYG+TE++ I+
Sbjct: 336 YKKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINLKLGYGMTETTATISCWGDDRINP 395
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
SVG+ + + +++I E NE+L V+G VM+GY+KNP T +A DG+L
Sbjct: 396 QSVGNVMPNVQVRI--GEENEIL---------VKGGMVMKGYYKNPEETAKAFTPDGYLR 444
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD G + +++ L + R K+ + S G+ + P +E + +LI QI
Sbjct: 445 TGDAGNLDGNNN----------LFITERIKELMKTSNGKYIAPQMIEGKVGKYNLIEQIA 494
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK-EKTISLLYGELRKW 434
VI ++ A+IVP+ E + A K L+I + +++ K + I + +L+K+
Sbjct: 495 VIADGKKFVSALIVPNYEMLSQALKDLNIKCKNTADMIKHSQVIEYIGKQLQKF 548
>gi|451971092|ref|ZP_21924314.1| putative long-chain-fatty-acid--CoA ligase [Vibrio alginolyticus
E0666]
gi|451932908|gb|EMD80580.1| putative long-chain-fatty-acid--CoA ligase [Vibrio alginolyticus
E0666]
Length = 602
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/437 (29%), Positives = 209/437 (47%), Gaps = 55/437 (12%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ E DD+ T +YTSGTTG PKGVML + N+ Q+ + D L LP H
Sbjct: 171 RLEQAKDDDLLTLIYTSGTTGQPKGVMLDYANIAAQLEGHDQRLSLSQSDVSLCFLPLSH 230
Query: 78 VYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ERA +++ +G Y ++D L + QP M +VP YE ++S I +++ +
Sbjct: 231 VFERAWTFYVLYKGATNCYLQDTMQVRDALSQVQPTVMCAVPRFYEKIFSAIHEKVSRAP 290
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
R+++ + + A C + ++QPS + L +
Sbjct: 291 IHRKIMFTWAVNMGAKMAA--------C-HQEKRQPSLM---------------LRKSYA 326
Query: 197 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 327 LADKLVLSKLRALLGGKINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWD 386
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
C S+G + ++KI E NE+L VRG VM+GY+K P T++ D
Sbjct: 387 DKCFNPDSIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETEKTFD 435
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
E G+L TGD G+I + G L + R K+ + S G+ + P +E A +
Sbjct: 436 EHGFLKTGDAGYIDEN----------GNLFITDRIKELMKTSGGKYIAPQMIEGAIGKDH 485
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLL 427
I QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 486 FIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRVELIKHHQVVEMLEKRVNDL 545
Query: 428 YGELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 546 QKELAKFEQVKKFKLLP 562
>gi|393780659|ref|ZP_10368867.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 412 str. F0487]
gi|392608113|gb|EIW90975.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 412 str. F0487]
Length = 599
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/414 (31%), Positives = 216/414 (52%), Gaps = 49/414 (11%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHVYERAC 83
DD+ T +YTSGTTG PKGVMLT++NL Q+ + + +N D L+ LP HV+ERA
Sbjct: 180 DDLFTIIYTSGTTGEPKGVMLTYENLAFQMVGHTERLSTVDNTDTSLAFLPLSHVFERAW 239
Query: 84 GYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
YF + + + Y NL ++ L +P M +VP YE +++ + + SS V
Sbjct: 240 TYFCLYKAVTVYYLDDTNLVREALAEVRPTLMCAVPRFYEKIFATVHDRADASS----FV 295
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
R L R++ A KR+ L K+PS+ +L + L +K+V
Sbjct: 296 KRKLFRLAIA--TGKRV---LTLREQGKKPSF---------------VLQKAYNLFDKMV 335
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
YKK++ A+G K GG +L I F+++IG+ +++GYG+TE++ I+
Sbjct: 336 YKKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINLKLGYGMTETTATISCWGDDRINP 395
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
SVG+ + + +++I E NE+L V+G VM+GY+KNP T +A DG+L+
Sbjct: 396 QSVGNVMPNVQVRI--GEENEIL---------VKGGMVMKGYYKNPEETAKAFTPDGYLH 444
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD G + +++ L + R K+ + S G+ + P +E + +LI QI
Sbjct: 445 TGDAGNLDGNNN----------LFITERIKELMKTSNGKYIAPQMIEGKVGKYNLIEQIA 494
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKW 434
VI ++ A+IVP+ E + A K L+I + +++ K + I + +L+K+
Sbjct: 495 VIADGKKFVSALIVPNYEMLSQALKDLNIKCKNTADMIKHSQVIEYIGKQLQKF 548
>gi|326797469|ref|YP_004315288.1| long-chain-fatty-acid--CoA ligase [Sphingobacterium sp. 21]
gi|326548233|gb|ADZ76618.1| Long-chain-fatty-acid--CoA ligase [Sphingobacterium sp. 21]
Length = 597
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 134/407 (32%), Positives = 199/407 (48%), Gaps = 54/407 (13%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I DD+ T +YTSGTTG+PKGV L+HKNL+ ++P EN +S LP H++ER
Sbjct: 167 IHEDDLLTLIYTSGTTGSPKGVFLSHKNLVSNFTDCAHLLP-ENYKTAISFLPLCHIFER 225
Query: 82 ACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
Y F +GI + Y + + D+ +P+ +VP V E +Y I +
Sbjct: 226 MVVYLYFYKGISVYYAENMDTIVADINDVKPNGFTTVPRVLEKVYDKIVDK--------- 276
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+AL I A + L K+P + + +I AI A K
Sbjct: 277 --GKALTGIKHAL-----FFWALDLGLKFKEPRK-----NSFFYKIKLAI-------ARK 317
Query: 201 LVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
L++KK Q A+G + G+ SGG +L + + A G+ V GYGLTE+SPVIA N
Sbjct: 318 LIFKKWQMALGGNIVGIISGGAALQERLARVFWAAGIPVLEGYGLTETSPVIAVNNFERN 377
Query: 260 VLG--SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
LG +VG + ++KI S G + +G V +GY+KN AT++A DED
Sbjct: 378 GLGFGTVGPLLKSVKVKI-----------ASDGEILCKGPNVTKGYYKNDEATREAFDED 426
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
G+ TGDIG + G L + R K+ + G+ V P +E + S+LI
Sbjct: 427 GYFKTGDIGELTTE----------GFLRITDRKKEMFKTAGGKYVAPQIIENKFMESTLI 476
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 424
QI+VIG+ +R P A+IVP EE+ A + I + +L K+ +
Sbjct: 477 AQIMVIGEGKRFPAALIVPAFEELKKWAGKNGISGSTKEDLIKDPKV 523
>gi|184201148|ref|YP_001855355.1| putative fatty-acid--CoA ligase [Kocuria rhizophila DC2201]
gi|183581378|dbj|BAG29849.1| putative fatty-acid--CoA ligase [Kocuria rhizophila DC2201]
Length = 602
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/385 (32%), Positives = 195/385 (50%), Gaps = 51/385 (13%)
Query: 19 YETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDKFLSMLPPW 76
Y+ + DD AT +YTSGTTG PKG LTH+N + ++ + G + L LP
Sbjct: 176 YDGVSLDDAATLIYTSGTTGPPKGCELTHRNFVACSQNAIPVAGELMHEGARTLLFLPLA 235
Query: 77 HVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 135
HV+ R GI L +T V L DDL R++P ++++VP V+E + +G + +
Sbjct: 236 HVFARFVEVTSLDAGIALAHTPDVSQLMDDLARFKPTFILAVPRVFEKILAGARFKAQAG 295
Query: 136 SAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLH 195
S ++++ + + A++ + + + P WL AR H
Sbjct: 296 SPVKKLIFERAVATAAAWSKASQ--------QGRVSP--------WLAAR---------H 330
Query: 196 LLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
L +KLVY ++ A+G + VSGG +L ++ F+ IGV V GYGLTE++ I+A
Sbjct: 331 RLYDKLVYSTLREAMGGEVRYAVSGGAALGEYLAHFFNGIGVFVVEGYGLTETTAPISAN 390
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
P+ N LG+VGHP+ E+ I AE E+L VRG V + Y P T +A
Sbjct: 391 VPSINRLGTVGHPMPGNEVAI--AEDGEIL---------VRGVNVFERYNGLPEKTAEAF 439
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
DGW TGD+G + G+L + GR K+ IV ++G+NV P +LE+ S
Sbjct: 440 -RDGWFATGDLGHLDDE----------GLLTVTGRKKEIIVTASGKNVIPTQLEDPIRAS 488
Query: 375 SLIRQIVVIGQDQRRPGAIIVPDKE 399
+ + QI+V+G ++ A+I D E
Sbjct: 489 ATVGQIMVVGDNRPFVAALITLDPE 513
>gi|390948342|ref|YP_006412102.1| AMP-forming long-chain acyl-CoA synthetase [Alistipes finegoldii
DSM 17242]
gi|390424911|gb|AFL79417.1| AMP-forming long-chain acyl-CoA synthetase [Alistipes finegoldii
DSM 17242]
Length = 635
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/454 (29%), Positives = 217/454 (47%), Gaps = 62/454 (13%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
IG+DD AT YTSGTT +PKGV+LTH+N + + + + L +LP H +
Sbjct: 172 IGNDDYATITYTSGTTADPKGVVLTHRNYTANVEQSLSRIDIPSSFRTLIILPLDHCFAH 231
Query: 82 ACGYFIF----------SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
G++I G M T ++N+ +++ +PH+++SVP + + I+
Sbjct: 232 VVGFYIMIACGATVATVQVGATPMET-LKNIPQNIREVRPHFLLSVPALAKNFRKNIEGS 290
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
I + +R ++ Y +G+ R Q W +L
Sbjct: 291 IRAKGRFTERLFNLALRTAYLYNK-----DGYG--RGQ----------GW------RVLL 327
Query: 192 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
WP L + ++++K++ A G S + V GG L + F+ AIG+ + GYGL+E++PV
Sbjct: 328 WPAVRLFDAVLFRKVREAFGGSLRFFVGGGALLDAELQRFFYAIGIPMFQGYGLSEATPV 387
Query: 251 IAARRPTC--NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPS 308
I+ P + GS G + ++KIVD EV P G KG + +RG VM GY+KNP
Sbjct: 388 ISTNSPKYHWHRFGSSGKILIPLDLKIVDEAGREV-PRGEKGEIVIRGENVMAGYWKNPE 446
Query: 309 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 368
A+ + + DGWL+TGD+G+++ L + GR K ++ S GE P +E
Sbjct: 447 ASAETV-RDGWLHTGDMGYVSKDD----------FLYVLGRFKSLLIASDGEKYSPEGME 495
Query: 369 EAAL-RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLL 427
EA + +S I QI++ GAI+VP++E A +R A E E +L
Sbjct: 496 EAIVDKSPYIDQIIIHNNQSPFTGAIVVPNRE----ALRRELDSRGIAGEKRAETAAEIL 551
Query: 428 YGELRKWTSKCSFQ--------IGPIHVVDEPFT 453
GE+ ++ + F + +VDEPFT
Sbjct: 552 GGEIDRYRAGGVFGGEFPERWLPAGLAIVDEPFT 585
>gi|406883851|gb|EKD31364.1| hypothetical protein ACD_77C00342G0004 [uncultured bacterium]
Length = 624
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 208/406 (51%), Gaps = 48/406 (11%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 80
+I ++D AT YTSGTT +PKGV+LTH+N + + K +LP H +
Sbjct: 180 SIQNNDYATITYTSGTTADPKGVILTHRNYTANVEQALTCMTIPEKFKNFIILPLDHCFA 239
Query: 81 RACGYFIF----------SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQK 130
G++I +G M T ++N+ ++ +P+ ++SVP + ++ I+
Sbjct: 240 HVVGFYIMISQGAIVATVQQGKSAMET-LKNIPVNIMDVKPNLILSVPALAKSFKKNIEN 298
Query: 131 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 190
+ + + ++++FAY +G+ +N +
Sbjct: 299 SVKSKGGFIWGLYNFALKVAFAYNR-----DGWDRGKNG------------------TFL 335
Query: 191 LWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLTESSP 249
L PL LL +K+++ K++ A+G GGG+ L + FY AIG+ + GYGL+E++P
Sbjct: 336 LHPLKLLFDKILFSKMRQAMGGELEFFVGGGALLDKELQKFYYAIGIPMYQGYGLSEATP 395
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
+I+A P + LGS G P+ EI+I+++E ++LP G G + V+G VM GY+KNP +
Sbjct: 396 IISANTPNRHKLGSSGIPVKPLEIRIMNSE-GKILPLGESGEIVVKGENVMAGYWKNPIS 454
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
TK+ + +DGWL TGD+G++ P G L ++GR K ++ S GE P E+EE
Sbjct: 455 TKETV-KDGWLYTGDLGFMDPD----------GFLHVKGRFKSLLIGSDGEKYSPEEIEE 503
Query: 370 AAL-RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 414
+ +S++I+Q+++ A+IV DK L + + V D
Sbjct: 504 VIVTQSNIIQQMMLYNNQSAYTIAVIVADKNSPLKGRELIKAVWED 549
>gi|430760195|ref|YP_007216052.1| Long-chain-fatty-acid--CoA ligase [Thioalkalivibrio nitratireducens
DSM 14787]
gi|430009819|gb|AGA32571.1| Long-chain-fatty-acid--CoA ligase [Thioalkalivibrio nitratireducens
DSM 14787]
Length = 625
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/388 (33%), Positives = 191/388 (49%), Gaps = 47/388 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
D +AT VYTSGTTG PKGVML+H+ LL + P D FLS LP H ER G
Sbjct: 203 DSLATIVYTSGTTGRPKGVMLSHRALLFNAHAASRCAPLGGEDVFLSFLPLSHTLERTAG 262
Query: 85 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
F+ G E+++ ++ L +DL+ QP ++SVP +YE++Y+ IQ + SA R++
Sbjct: 263 CFLPMVVGAEVVFARSIPQLAEDLRVVQPTVLVSVPRIYESVYAKIQAGLKQKSALARLL 322
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
R + +A F+ I Q++ W+ + L+A K+
Sbjct: 323 FRTTVDAGWAR--FEHI---------QQRAG---------WSPRLLLWPLLGRLVAHKV- 361
Query: 203 YKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
++ G + V GG LP I F+ +G+ V GYGLTE+SPV+ RP N+
Sbjct: 362 ---LERLGGRLEYAVCGGAPLPPSIARFFIGLGLPVYHGYGLTEASPVVTVNRPDENLPA 418
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G P+ EI+I E +E+L R VM GY+++ AT +D DGWL+T
Sbjct: 419 SIGKPLPGVEIRI--GEQDELL---------TRSPSVMLGYWRDDEATAATIDPDGWLHT 467
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD I G + + GR KD IVL GE V P ++E + L Q++V
Sbjct: 468 GDKARIDAQ----------GFVFITGRIKDIIVLGNGEKVPPADMEMSIQLDPLFDQVLV 517
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSI 410
IG+ + A++V D A+ L +
Sbjct: 518 IGEGRAFLSALVVLDAAAWREYARELDV 545
>gi|334366829|ref|ZP_08515752.1| AMP-binding enzyme [Alistipes sp. HGB5]
gi|313157026|gb|EFR56458.1| AMP-binding enzyme [Alistipes sp. HGB5]
Length = 635
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/454 (29%), Positives = 217/454 (47%), Gaps = 62/454 (13%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
IG+DD AT YTSGTT +PKGV+LTH+N + + + + L +LP H +
Sbjct: 172 IGNDDYATITYTSGTTADPKGVVLTHRNYTANVEQSLSRIDIPSSFRTLIILPLDHCFAH 231
Query: 82 ACGYFIF----------SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
G++I G M T ++N+ +++ +PH+++SVP + + I+
Sbjct: 232 VVGFYIMIACGATVATVQVGATPMET-LKNIPQNIREVRPHFLLSVPALAKNFRKNIEGS 290
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
I + +R ++ Y +G+ R Q W +L
Sbjct: 291 IRAKGRFTERLFNLALRTAYLYNK-----DGYG--RGQ----------GW------RVLL 327
Query: 192 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
WP L + ++++K++ A G S + V GG L + F+ AIG+ + GYGL+E++PV
Sbjct: 328 WPAVRLFDAVLFRKVREAFGGSLRFFVGGGALLDAELQRFFYAIGIPMFQGYGLSEATPV 387
Query: 251 IAARRPTC--NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPS 308
I+ P + GS G + ++KIVD EV P G KG + +RG VM GY+KNP
Sbjct: 388 ISTNSPKYHWHRFGSSGKILIPLDLKIVDEAGREV-PRGEKGEIVIRGENVMAGYWKNPE 446
Query: 309 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 368
A+ + + DGWL+TGD+G+++ L + GR K ++ S GE P +E
Sbjct: 447 ASAETV-RDGWLHTGDMGYVSKDD----------FLYVLGRFKSLLIASDGEKYSPEGME 495
Query: 369 EAAL-RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLL 427
EA + +S I QI++ GAI+VP++E A +R A E E +L
Sbjct: 496 EAIVDKSPYIDQIIIHNNQSPFTGAIVVPNRE----ALRRELDSRGIAGEKRAETAAEIL 551
Query: 428 YGELRKWTSKCSFQ--------IGPIHVVDEPFT 453
GE+ ++ + F + +VDEPFT
Sbjct: 552 GGEIDRYRAGGVFGGEFPERWLPAGLAIVDEPFT 585
>gi|54307638|ref|YP_128658.1| long-chain-fatty-acid-CoAligase [Photobacterium profundum SS9]
gi|46912061|emb|CAG18856.1| putative long-chain-fatty-acid-CoAligase [Photobacterium profundum
SS9]
Length = 604
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/402 (32%), Positives = 194/402 (48%), Gaps = 47/402 (11%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+ T +YTSGTTG PKGVML + N+ Q+ + + GD L LP HV+ERA
Sbjct: 178 DDLLTLIYTSGTTGTPKGVMLDYANIAAQLAGHDQNLSLDEGDSSLCFLPLSHVFERAWT 237
Query: 85 YFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
+++ RG I T LK+ L +P+ M +VP VYE +YS + ++ + R+++
Sbjct: 238 FYVLHRGAINHYLTDTNQLKEALADVKPNVMAAVPRVYEKIYSTVHDKVSRAPFHRKLI- 296
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
++A R+ C + +QPS L+ + H LA KLV
Sbjct: 297 -----FTWAVNMGARM--AVC-HQEHRQPSKLLTMS---------------HNLANKLVL 333
Query: 204 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K++ +G + K GG L I F+ AIG+ V++GYG+TE++ ++ C
Sbjct: 334 SKLRDILGGNIKFMPCGGAKLDEGIGRFFHAIGINVKLGYGMTETTATVSCWDDQCFNPD 393
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G + EIKI E NE+L VRG VM+GY+ P T + EDG+L T
Sbjct: 394 SIGMAMPGAEIKI--GENNEIL---------VRGPMVMRGYYNMPEETAKNFTEDGFLKT 442
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD G G L + R K+ + S G+ + P +E A + I QI V
Sbjct: 443 GDAGHFDEQ----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAV 492
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 424
I ++ A+IVP + + A+ L+I + D EL K I
Sbjct: 493 IADTRKFVSALIVPCFDTLEEHARELNIKYKDRLELVKNSQI 534
>gi|322513780|ref|ZP_08066867.1| long-chain-fatty-acid--CoA ligase [Actinobacillus ureae ATCC 25976]
gi|322120411|gb|EFX92337.1| long-chain-fatty-acid--CoA ligase [Actinobacillus ureae ATCC 25976]
Length = 592
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 137/432 (31%), Positives = 207/432 (47%), Gaps = 66/432 (15%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENG--DKFLSMLPPWHVYERA 82
DD+ T +YTSGTTG PKGVML NL HQ+++ +D+ E G D LS LP H++ERA
Sbjct: 181 DDLFTLIYTSGTTGTPKGVMLDFSNLAHQLQA-HDLALPEVGPDDVSLSFLPFSHIFERA 239
Query: 83 CGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
++ +G + Y N ++ L +P M +VP +YE +YSGI ++ + RR
Sbjct: 240 WVAYLLHKGATVCYLEDTNEVRTALAEVKPTLMCAVPRLYEKMYSGIFDKVKQAPFYRRA 299
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
+ + ++ +G QK + LA+KL
Sbjct: 300 LFQWALK------------QGKHFVHTQKATF--------------------TYKLADKL 327
Query: 202 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
V K+++ +G + K GG L I F+ +IG+ V++GYG+TE++ ++
Sbjct: 328 VLSKLRALLGGNIKMMPCGGAKLEPTIGEFFHSIGINVKLGYGMTETTATVSCWADRNFA 387
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
L S+G + + E+KI D NE+L VRG VM+GY+KNP T +A EDG+L
Sbjct: 388 LNSIGTLMPNAEVKIGD--DNEIL---------VRGGMVMKGYYKNPQETAKAFTEDGFL 436
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
TGD G + H G L + R K+ + S G+ + P +E + I QI
Sbjct: 437 RTGDAGALDEH----------GNLYITDRIKELMKTSNGKYIAPQYIEGKLAKDKFIEQI 486
Query: 381 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELR 432
VI ++ A+IVP E + AK+L+I + D EL K EK I L EL
Sbjct: 487 AVIADTKKYVSALIVPSFEALEEYAKQLNIKYHDRLELIKHSAVIQLFEKRIEELQQELP 546
Query: 433 KWTSKCSFQIGP 444
+ F + P
Sbjct: 547 HFEQIKKFTLLP 558
>gi|300710198|ref|YP_003736012.1| AMP-dependent synthetase and ligase [Halalkalicoccus jeotgali B3]
gi|448297030|ref|ZP_21487078.1| AMP-dependent synthetase and ligase [Halalkalicoccus jeotgali B3]
gi|299123881|gb|ADJ14220.1| AMP-dependent synthetase and ligase [Halalkalicoccus jeotgali B3]
gi|445580212|gb|ELY34598.1| AMP-dependent synthetase and ligase [Halalkalicoccus jeotgali B3]
Length = 647
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 131/398 (32%), Positives = 198/398 (49%), Gaps = 58/398 (14%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNL---LHQIRSLYDI--------VPAENGD- 67
+ + +D+AT +YTSGTTG PKGV LTH+NL + Q R + +PA +G+
Sbjct: 201 DAVAPEDLATLIYTSGTTGQPKGVELTHRNLRANVTQCRKRFGPRPDKEAKGLPAIDGET 260
Query: 68 KFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLY 125
+ +S LP HV ER G+F+ F+ G + Y + L++D Q +P SVP VYE +Y
Sbjct: 261 RTVSFLPLAHVLERTAGHFLMFASGAAVAYAESPDTLQEDFQAVRPTTGTSVPRVYEKIY 320
Query: 126 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 185
I+ Q S RR+ A + + AY + PS
Sbjct: 321 DAIRSQASESDLRRRIFEWA-VDVGKAY---------------HRDPS------------ 352
Query: 186 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 244
+L +A+KLV+ +++ A+G + +SGGGSL + Y +G+ + GYGL
Sbjct: 353 -PGPVLTGKQAIADKLVFSQVKEALGGEIEFLISGGGSLSAELCALYHGMGMPILEGYGL 411
Query: 245 TESSPVIAARRPTCNVLGSVGHPINHTEIKI---VDAETNEVLPAGSKGIVKVRGSQVMQ 301
TE+SPVI+ +G++G P+ E ++ V E G G + VRG V +
Sbjct: 412 TETSPVISVNPIEAPEIGTIGPPLPDVEARVDASVVGEAQRRDADGEVGELLVRGPNVTR 471
Query: 302 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 361
GY++N AT ++ ED W TGD+ I P +V RAK IVLSTG+N
Sbjct: 472 GYWRNEEATAESFTED-WFRTGDVVEIRPDD----------YVVFRERAKQIIVLSTGKN 520
Query: 362 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
V P +E+A S L+ Q V+G ++ A++VP+ E
Sbjct: 521 VAPGPIEDAFAASELVEQCFVMGDGRKFISALVVPNVE 558
>gi|448544962|ref|ZP_21625775.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-646]
gi|448547339|ref|ZP_21626817.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-645]
gi|448556217|ref|ZP_21631942.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-644]
gi|445704740|gb|ELZ56649.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-646]
gi|445716350|gb|ELZ68094.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-645]
gi|445716969|gb|ELZ68698.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-644]
Length = 666
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 130/392 (33%), Positives = 190/392 (48%), Gaps = 58/392 (14%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDK--------FLSML 73
+DD+A+ +YTSGTTG PKGV LTH N + Y + GD LS L
Sbjct: 206 TDDLASLIYTSGTTGQPKGVRLTHWNFRSNVNESYRRFGPRPDKGDTPVIGPDSVALSFL 265
Query: 74 PPWHVYERACGYFIF--SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P HV+ER G+F+ + + L++D Q +P SVP VYE LY I+ +
Sbjct: 266 PLAHVFERMAGHFMMFAAGAAVAYAESPDTLREDFQLVRPTVGTSVPRVYEKLYDAIRAE 325
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
S A +RV A + + AY P YL L
Sbjct: 326 AGESPAKKRVFEWA-VGVGQAY-------------HTTDAPGYL---------------L 356
Query: 192 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
H LA++LV+ +++ A+G + +SGGGSL + Y A+G+ + GYGLTE+SPV
Sbjct: 357 TAKHRLADRLVFGQVRDALGGNLDFFISGGGSLSAELCALYHAMGLPIYEGYGLTETSPV 416
Query: 251 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYFKNPS 308
I+ P +G++G+P+ + E K+ + L G G + VRG V +GY+ +P
Sbjct: 417 ISVNPPEAPKIGTIGYPLRNVETKLDTTVVGDQLGEAGGEVGELLVRGPSVTEGYWNDPE 476
Query: 309 ATKQAL---DEDG-WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 364
T+ A DE G W TGD+ RR G + RAK +VLSTG+NV P
Sbjct: 477 ETEAAFVGDDEGGRWFRTGDV----------VERRPDGYIAFRERAKQILVLSTGKNVAP 526
Query: 365 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 396
+E+A S ++ Q +V+G ++ A+IVP
Sbjct: 527 GPIEDAFASSPVVEQCMVLGDGRKFVSALIVP 558
>gi|150007270|ref|YP_001302013.1| long-chain-fatty-acid-CoA ligase [Parabacteroides distasonis ATCC
8503]
gi|149935694|gb|ABR42391.1| long-chain-fatty-acid-CoA ligase, putative [Parabacteroides
distasonis ATCC 8503]
Length = 633
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 215/429 (50%), Gaps = 54/429 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
+++G+DD AT YTSGTT +PKGV+LTH+N + V ++ + L +LP H +
Sbjct: 173 QSLGNDDYATITYTSGTTADPKGVILTHRNYTANVEQALTCVDIDDTWRTLVILPLDHCF 232
Query: 80 ERACGYFIF-SRG-----IELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQK 130
G++IF S+G +++ T + LK+ +++ ++P+ ++SVP + + I++
Sbjct: 233 AHVVGFYIFMSKGASVATVQVGRTGMETLKNIPINIKEFKPYLILSVPALAKNFKKNIEQ 292
Query: 131 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 190
I + +RI + Y EG +
Sbjct: 293 GIRARGKNAVRLFNLALRIGYIYNGDSDEEEG----------------------KGFRVF 330
Query: 191 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
L PL L +KL++ K++ G K + GG L + FY A+G+ + GYGL+E++P
Sbjct: 331 LKPLIRLFDKLLFTKVRENFGGELKFFIGGGALLDKDLQKFYYALGIPMYQGYGLSEATP 390
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
+I+ P +V GS G + ++KI D + N VLP G KG + +RG VM GY+KNP++
Sbjct: 391 IISTNGPRRHVFGSSGVLVRPLDLKICDMDGN-VLPPGEKGEIVIRGENVMAGYWKNPAS 449
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T + E GWL TGD+G++ G+L + GR K ++ S GE P +EE
Sbjct: 450 TADTVKE-GWLYTGDMGYMRD-----------GLLYVLGRFKSLLIGSDGEKYSPEGIEE 497
Query: 370 AALR-SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD---ASELSKEKTIS 425
A + SS I Q+++ A++VP+KE + R + H + S+ +E+ I
Sbjct: 498 ALVEHSSCIDQLILYNNQSPYTTALLVPNKERL-----RKHLAHQNLDLTSDQGREEAIR 552
Query: 426 LLYGELRKW 434
++ ++ ++
Sbjct: 553 IIQRQIDRF 561
>gi|298375259|ref|ZP_06985216.1| long-chain-fatty-acid-CoA ligase [Bacteroides sp. 3_1_19]
gi|298267759|gb|EFI09415.1| long-chain-fatty-acid-CoA ligase [Bacteroides sp. 3_1_19]
Length = 633
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 127/429 (29%), Positives = 217/429 (50%), Gaps = 54/429 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
+++G+DD AT YTSGTT +PKGV+LTH+N + V ++ + L +LP H +
Sbjct: 173 QSLGNDDYATITYTSGTTADPKGVILTHRNYTANVEQALTCVDIDDTWRTLVILPLDHCF 232
Query: 80 ERACGYFIF-SRG-----IELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQK 130
G++IF S+G +++ T + LK+ +++ ++P+ ++SVP + + I++
Sbjct: 233 AHVVGFYIFMSKGASVATVQVGRTGMETLKNIPINIKEFKPYLILSVPALAKNFKKNIEQ 292
Query: 131 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 190
I + +RI + Y EG RI +
Sbjct: 293 GIRARGKNAVRLFNLALRIGYIYNGDSDEEEGKGF-------------------RI---L 330
Query: 191 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
L PL L +KL++ K++ G K + GG L + FY A+G+ + GYGL+E++P
Sbjct: 331 LKPLVRLFDKLLFAKVRENFGGELKFFIGGGALLDKDLQKFYYALGIPMYQGYGLSEATP 390
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
+I+ P +V GS G + ++KI D + N VLP G KG + +RG VM GY+KNP++
Sbjct: 391 IISTNGPRRHVFGSSGVLVRPLDLKICDMDGN-VLPPGEKGEIVIRGENVMAGYWKNPAS 449
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T + E GWL TGD+G++ G+L + GR K ++ S GE P +EE
Sbjct: 450 TADTVKE-GWLYTGDMGYMR-----------DGLLYVLGRFKSLLIGSDGEKYSPEGIEE 497
Query: 370 AALR-SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD---ASELSKEKTIS 425
A + SS I Q+++ A++VP+KE + R + H + S+ +E+ I
Sbjct: 498 ALVEHSSCIDQLILYNNQSPYTTALLVPNKERL-----RKHLAHQNLDLTSDQGREEAIR 552
Query: 426 LLYGELRKW 434
++ ++ ++
Sbjct: 553 IIQRQIDRF 561
>gi|433429134|ref|ZP_20407305.1| acyl-CoA synthetase [Haloferax sp. BAB2207]
gi|432195189|gb|ELK51743.1| acyl-CoA synthetase [Haloferax sp. BAB2207]
Length = 666
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/391 (32%), Positives = 188/391 (48%), Gaps = 58/391 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDK--------FLSMLP 74
+D+A+ +YTSGTTG PKGV LTH N + Y + GD LS LP
Sbjct: 207 EDLASLIYTSGTTGQPKGVRLTHWNFRSNVNESYRRFGPRPDKGDTPVIGPDSVALSFLP 266
Query: 75 PWHVYERACGYFIF--SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
HV+ER G+F+ + + L++D Q +P SVP VYE LY I+ Q
Sbjct: 267 LAHVFERMAGHFMMFAAGAAVAYAESPDTLREDFQLVRPTVGTSVPRVYEKLYDAIRAQA 326
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
S A +RV A + + AY P YL L
Sbjct: 327 SESPAKKRVFEWA-VGVGQAY-------------HTTDAPGYL---------------LT 357
Query: 193 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
H LA++LV+ +++ A+G + +SGGGSL + Y A+G+ + GYGLTE+SPVI
Sbjct: 358 AKHRLADRLVFGQVRDALGGNLDFFISGGGSLSAELCALYHAMGLPIYEGYGLTETSPVI 417
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYFKNPSA 309
+ P +G++G+P+ + E K+ + L G G + VRG V +GY+ +P
Sbjct: 418 SVNPPEAPKIGTIGYPLRNVETKLDTTVVGDQLGDAGGEVGELLVRGPSVTEGYWNDPEE 477
Query: 310 TKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 365
T+ A ED W TGD+ RR G + RAK +VLSTG+NV P
Sbjct: 478 TEAAFVEDDEGRRWFRTGDV----------VERRPDGYIAFRERAKQILVLSTGKNVAPG 527
Query: 366 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 396
+E+A S ++ Q +V+G ++ A+IVP
Sbjct: 528 PIEDAFASSPVVEQCMVLGDGRKFVSALIVP 558
>gi|448599433|ref|ZP_21655337.1| acyl-CoA synthetase [Haloferax alexandrinus JCM 10717]
gi|445736894|gb|ELZ88434.1| acyl-CoA synthetase [Haloferax alexandrinus JCM 10717]
Length = 666
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/391 (32%), Positives = 188/391 (48%), Gaps = 58/391 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDK--------FLSMLP 74
+D+A+ +YTSGTTG PKGV LTH N + Y + GD LS LP
Sbjct: 207 EDLASLIYTSGTTGQPKGVRLTHWNFRSNVNESYRRFGPRPDKGDTPVIGPDSVALSFLP 266
Query: 75 PWHVYERACGYFIF--SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
HV+ER G+F+ + + L++D Q +P SVP VYE LY I+ Q
Sbjct: 267 LAHVFERMAGHFMMFAAGAAVAYAESPDTLREDFQLVRPTVGTSVPRVYEKLYDAIRAQA 326
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
S A +RV A + + AY P YL L
Sbjct: 327 SESPAKKRVFEWA-VGVGQAY-------------HTTDAPGYL---------------LT 357
Query: 193 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
H LA++LV+ +++ A+G + +SGGGSL + Y A+G+ + GYGLTE+SPVI
Sbjct: 358 AKHRLADRLVFGQVRDALGGNLDFFISGGGSLSAELCALYHAMGLPIYEGYGLTETSPVI 417
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYFKNPSA 309
+ P +G++G+P+ + E K+ + L G G + VRG V +GY+ +P
Sbjct: 418 SVNPPEAPKIGTIGYPLRNVETKLDTTVVGDQLGEAGGEVGELLVRGPSVTEGYWNDPEE 477
Query: 310 TKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 365
T+ A ED W TGD+ RR G + RAK +VLSTG+NV P
Sbjct: 478 TEAAFVEDDEGRRWFRTGDV----------VERRPDGYIAFRERAKQILVLSTGKNVAPG 527
Query: 366 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 396
+E+A S ++ Q +V+G ++ A+IVP
Sbjct: 528 PIEDAFASSPVVEQCMVLGDGRKFVSALIVP 558
>gi|409721734|ref|ZP_11269892.1| acyl-CoA synthetase [Halococcus hamelinensis 100A6]
gi|448722240|ref|ZP_21704778.1| acyl-CoA synthetase [Halococcus hamelinensis 100A6]
gi|445789951|gb|EMA40624.1| acyl-CoA synthetase [Halococcus hamelinensis 100A6]
Length = 643
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 124/386 (32%), Positives = 190/386 (49%), Gaps = 56/386 (14%)
Query: 27 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY----------DIVPAENGDKFLSMLPPW 76
+A+ VYTSGTTG PKGV L+H+N + +Y D G LS LP
Sbjct: 208 LASLVYTSGTTGRPKGVKLSHRNFRANVDQVYRRFGPRPDKGDTPTIGPGSTSLSFLPLA 267
Query: 77 HVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 134
HV+ER G+F+ F+ G + Y + L++D P SVP VYE LY I++Q
Sbjct: 268 HVFERLAGHFMQFAAGSTVAYAESPDTLREDFSLVTPSSATSVPRVYEKLYDTIREQASG 327
Query: 135 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 194
S+ + R+ A T R Y G + P A L
Sbjct: 328 SAVSSRIFGWA--------TEVGRAYHG------SESPG---------------AGLRAK 358
Query: 195 HLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 253
H LA++LV+ +++ +G + +SGGGSL + + A+G+ + GYGLTE++PV+A
Sbjct: 359 HALADRLVFSQVREGVGGNIDFFISGGGSLSPDLARLFHAMGLPILEGYGLTETAPVVAV 418
Query: 254 RRPTCNVLGSVGHPINHTEIKIVDAET--NEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 311
P +G++G+P++ E++ VD+ N+ G G + V+G V +GY+ P T
Sbjct: 419 NPPEAPEIGTIGYPVHDEEVR-VDSTVVPNDFDAEGEVGELLVKGPNVTEGYWNRPEETD 477
Query: 312 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 371
A D W TGD+ +R G L R+K +VLSTG+NV P +E+A
Sbjct: 478 DAFD-GKWFRTGDV----------VEQRPDGYLAFRERSKQLLVLSTGKNVAPRPIEDAF 526
Query: 372 LRSSLIRQIVVIGQDQRRPGAIIVPD 397
+ L+ Q +V+G ++ AI+VP+
Sbjct: 527 ASNPLVEQCMVVGDGEKFVSAIVVPN 552
>gi|255014105|ref|ZP_05286231.1| long-chain-fatty-acid-CoA ligase, putative [Bacteroides sp. 2_1_7]
gi|410101665|ref|ZP_11296593.1| hypothetical protein HMPREF0999_00365 [Parabacteroides sp. D25]
gi|409239463|gb|EKN32247.1| hypothetical protein HMPREF0999_00365 [Parabacteroides sp. D25]
Length = 633
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 124/429 (28%), Positives = 215/429 (50%), Gaps = 54/429 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
+++G+DD AT YTSGTT +PKGV+LTH+N + V ++ + L +LP H +
Sbjct: 173 QSLGNDDYATITYTSGTTADPKGVILTHRNYTANVEQALTCVDIDDTWRTLVILPLDHCF 232
Query: 80 ERACGYFIF-SRG-----IELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQK 130
G++IF S+G +++ T + LK+ +++ ++P+ ++SVP + + I++
Sbjct: 233 AHVVGFYIFMSKGASVATVQVGRTGMETLKNIPINIKEFKPYLILSVPALAKNFKKNIEQ 292
Query: 131 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 190
I + +RI + Y EG + +
Sbjct: 293 GIRARGKNAARLFNLALRIGYIYNGDSDEEEG----------------------KGFRVL 330
Query: 191 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
L PL L +KL++ K++ G K + GG L + FY A+G+ + GYGL+E++P
Sbjct: 331 LKPLVRLFDKLLFAKVRENFGGELKFFIGGGALLDKDLQKFYYALGIPMYQGYGLSEATP 390
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
+I+ P + GS G + ++KI D + N VLP G KG + +RG VM GY+KNP++
Sbjct: 391 IISTNGPRRHTFGSSGVLVRPLDLKICDMDGN-VLPPGEKGEIVIRGENVMAGYWKNPAS 449
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T + E GWL TGD+G++ G+L + GR K ++ S GE P +EE
Sbjct: 450 TADTVKE-GWLYTGDMGYMRD-----------GLLYVLGRFKSLLIGSDGEKYSPEGIEE 497
Query: 370 AALR-SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD---ASELSKEKTIS 425
A + SS I Q+++ A++VP+KE + R + H + S+ +E+ I
Sbjct: 498 ALVEHSSCIDQLILYNNQSPYTTALLVPNKERL-----RKHLAHQNLDLTSDQGREEAIR 552
Query: 426 LLYGELRKW 434
++ ++ ++
Sbjct: 553 IIQRQIDRF 561
>gi|448666528|ref|ZP_21685173.1| long-chain fatty-acid-CoA ligase [Haloarcula amylolytica JCM 13557]
gi|445771659|gb|EMA22715.1| long-chain fatty-acid-CoA ligase [Haloarcula amylolytica JCM 13557]
Length = 660
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 135/415 (32%), Positives = 204/415 (49%), Gaps = 63/415 (15%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNL---LHQIRSLYDIVPAENGD--------KFLSML 73
DD+A+ +YTSGTTG PKGV LTH+N ++Q R P ++ D + ++ L
Sbjct: 210 DDLASLIYTSGTTGQPKGVQLTHRNFRANVNQARRRIGPRPDKSSDLPTVTAETRSIAFL 269
Query: 74 PPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P HV+ER G +F+++ G + Y + L DDLQ +P +SVP VYE ++ ++ Q
Sbjct: 270 PLAHVFERLAGHFFMYASGAAVSYAESPDTLADDLQTVEPMTGLSVPRVYERIFDNMRTQ 329
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
S +R+ ++ + + T + IL
Sbjct: 330 ASESPLKKRIFDWSM-----------DVARDYARTDDP------------------GPIL 360
Query: 192 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
H LA++LVY ++ +G + + VSGGGSL + + +G+ + GYGLTE+SPV
Sbjct: 361 TAKHSLADRLVYSTVKERLGGNIEFMVSGGGSLSKTLCETFLGMGLTILEGYGLTETSPV 420
Query: 251 IAARRPTCNVLGSVGHPIN----HTEIKIVDA-ETNEVLPAGSKGIVKVRGSQVMQGYFK 305
+ P G++G P+ H + +VDA E ++V G G + V G V QGY+
Sbjct: 421 LTVNPPEDVRPGTLGAPLTEVDVHIDTGVVDASEFDDV--TGDVGELLVDGPNVTQGYWN 478
Query: 306 NPSATKQALDE-DG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 362
P AT +A E DG W TGDI R L+ R K+ +VLSTG+NV
Sbjct: 479 APDATTRAFTEIDGTQWFRTGDI----------VERTDDDFLIYHDRLKELLVLSTGKNV 528
Query: 363 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 417
P +E+ S + Q++V+G DQ+ GAIIVP+ EE+ A R + D E
Sbjct: 529 APQPIEDQFATSDRVDQVMVVGDDQKFVGAIIVPNFEELRRWADREGVDLPDDHE 583
>gi|332288204|ref|YP_004419056.1| long chain fatty acid CoA ligase [Gallibacterium anatis UMN179]
gi|330431100|gb|AEC16159.1| long chain fatty acid CoA ligase [Gallibacterium anatis UMN179]
Length = 600
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 133/430 (30%), Positives = 209/430 (48%), Gaps = 56/430 (13%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHVYERACG 84
D+ T +YTSGTTG PKGVML ++NL HQ+ + ++ + D LS LP H++ERA
Sbjct: 182 DLFTLIYTSGTTGEPKGVMLDYQNLAHQLATHQQTLMKIDGSDVSLSFLPLSHIFERAWV 241
Query: 85 YFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
++ S+G + + +++ L +P M +VP YE +Y+ + ++ + R+ +
Sbjct: 242 AYVLSQGAVNVYLDDPHKVREALSVVKPTLMCAVPRFYEKIYATVFDKVKQAPWLRQQIF 301
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
+RI L QKQ L WL PLH LA+ LV+
Sbjct: 302 YNALRIG-----------KLALRYQQKQQP----LPFWLK---------PLHQLADSLVF 337
Query: 204 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K+Q +G + GG L I +F+ IGV +++GYG+TE++ ++
Sbjct: 338 SKLQQVLGGRIRMMPCGGAKLEPEIGIFFHCIGVNIKLGYGMTETTATVSCWPDFGFESN 397
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G + T +KI D NE+L V+G VM+GYFKNP T + EDG+L T
Sbjct: 398 SIGQIMPGTTVKIGDE--NEIL---------VKGGGVMKGYFKNPEETAKCFTEDGFLKT 446
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD G++ G L + R KD + STG+ + P +E L+ LI QI V
Sbjct: 447 GDAGYVDAE----------GNLFMTDRIKDLMKTSTGKYIAPQAVEGKLLQDKLIEQIAV 496
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 434
I ++ A++VP + + AK+L+I + + +L K EK I+ L EL+ +
Sbjct: 497 IADARKYVSALVVPCFDTLEEYAKKLNIQYQNRLDLIKNAAIVEMFEKRINELQKELQGF 556
Query: 435 TSKCSFQIGP 444
F + P
Sbjct: 557 EKIKKFTLLP 566
>gi|262275041|ref|ZP_06052852.1| long-chain-fatty-acid--CoA ligase [Grimontia hollisae CIP 101886]
gi|262221604|gb|EEY72918.1| long-chain-fatty-acid--CoA ligase [Grimontia hollisae CIP 101886]
Length = 597
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 131/430 (30%), Positives = 205/430 (47%), Gaps = 55/430 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+ T +YTSGTTG PKGVML + N+ QI S ++ + L+ LP HV+ER
Sbjct: 177 DDLMTLIYTSGTTGEPKGVMLDYANIAAQIESHDQVLGISENEVSLAFLPLSHVFERCWT 236
Query: 85 YFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
+++ G Y + +++ LQ +P M +VP YE +YS + +++ T++ ++ +
Sbjct: 237 FYVLHHGATNCYLSNTYAIREALQDVKPTVMCAVPRFYEKIYSAVHEKVATANPVKKGMF 296
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
RA + I +TR K+P+ WL + H +A+KLV
Sbjct: 297 RAAVSIGNLMAE---------ITRKGKKPA------PWLKS---------AHRMADKLVL 332
Query: 204 KKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K++ +G + + GG L I F+ AIGV V++GYG+TE++ ++
Sbjct: 333 SKLRELLGGNITMMPCGGAKLEPAIGRFFHAIGVNVKLGYGMTETTATVSCWDSGSFDPD 392
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G P+ + E+KI E NE+L VRG VM+GY+ P T +DG+L T
Sbjct: 393 SIGMPMPNAEVKI--GENNEIL---------VRGPMVMRGYYNKPKETADTFTKDGFLKT 441
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD G I G L + R K+ + S G+ + P +E + I QI V
Sbjct: 442 GDAGHI----------DAKGNLFITDRIKELMKTSGGKYIAPQMIEGKLGKDHFIEQIAV 491
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 434
+ + A+IVP E + AK L+I + D EL K EK ++ L EL K+
Sbjct: 492 VADARHFVSALIVPCFETLESWAKELNIKYHDRMELIKHSEVVELFEKRLAELQKELAKF 551
Query: 435 TSKCSFQIGP 444
F + P
Sbjct: 552 EQVKKFTLLP 561
>gi|448731479|ref|ZP_21713779.1| acyl-CoA synthetase [Halococcus saccharolyticus DSM 5350]
gi|445792232|gb|EMA42844.1| acyl-CoA synthetase [Halococcus saccharolyticus DSM 5350]
Length = 645
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 127/409 (31%), Positives = 196/409 (47%), Gaps = 56/409 (13%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY----------DIVPAENGDKFLSMLP 74
DD+A+ +YTSGTTG PKGV LTH+N + +Y D + + +S LP
Sbjct: 206 DDLASLIYTSGTTGQPKGVQLTHRNFKANVDQVYRRFGPRPDKGDTPAIDTDSEAISFLP 265
Query: 75 PWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
HV+ER G+F+ F+ G + Y + L++D QP SVP VYE LY I+ Q
Sbjct: 266 LAHVFERLSGHFLMFAAGATVGYAESPDTLQEDFGLLQPTTGASVPRVYEKLYDAIRDQA 325
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
S+ R+ A + + Y A G R
Sbjct: 326 AESAVRERIFEWA-VDVGRTYQAADSPGIGLRAKRT------------------------ 360
Query: 193 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
+A++LV+ +++ A+G + + +SGGGSL + + +G+ + GYGLTE++PV+
Sbjct: 361 ----VADRLVFSQVREALGGNIEFLISGGGSLSPDLAELFHGMGIPILEGYGLTETAPVV 416
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK---VRGSQVMQGYFKNPS 308
+ P +G++G PI+ E++I + L A S G V VRG V GY+ P
Sbjct: 417 SVNPPEEPEIGTIGPPIHDEEVRIDSTVVADDLAAKSGGEVGELLVRGPNVTDGYWNRPE 476
Query: 309 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 368
T+ A DGW TGD+ +R G + R+K +VLSTG+NV P +E
Sbjct: 477 ETEDAF-RDGWFRTGDV----------VEQRPDGYIAFRERSKQLLVLSTGKNVAPGPIE 525
Query: 369 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 417
+A + S + Q + IG ++ A+IVP++ V A I +D S+
Sbjct: 526 DAFAQHSAVEQCMAIGDGEKFVSALIVPNEAHVREWADDEGIDLSDDSQ 574
>gi|221066952|ref|ZP_03543057.1| AMP-dependent synthetase and ligase [Comamonas testosteroni KF-1]
gi|220711975|gb|EED67343.1| AMP-dependent synthetase and ligase [Comamonas testosteroni KF-1]
Length = 648
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 139/450 (30%), Positives = 215/450 (47%), Gaps = 46/450 (10%)
Query: 13 AGKHYKY---ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKF 69
AG+ Y E +A VYTSGTTG PKGVMLTH N++ + ++ V A D F
Sbjct: 200 AGQRYTSALPEPPDKTQLAGIVYTSGTTGKPKGVMLTHDNVVSDLHAVMQRVKAFPEDVF 259
Query: 70 LSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSG 127
LS LP H +ER GY++ + G + Y +V L D+++ +P +ISVP +YE +Y+
Sbjct: 260 LSFLPLSHTFERTAGYYLAIATGSCVAYARSVAQLAQDMKQVKPTVLISVPRIYERVYAK 319
Query: 128 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 187
+Q+ + +SS R++ A+ + +KR FC + L A W
Sbjct: 320 VQESLASSSLKRKLFEAAVNK------GWKR----FCARQGIPLSEQLDAQASW------ 363
Query: 188 CAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTES 247
A P LL + + G + VSGG L I + +G+ + GYG+TE+
Sbjct: 364 -ASALPAWLLRSLVAQPLLAQFGGRLRVAVSGGAPLSPTIARCFLGLGLPMLQGYGMTET 422
Query: 248 SPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNP 307
+PV++A N +VG + E++I D + ++V G VM+GY+ P
Sbjct: 423 APVVSANGLDDNWPDTVGRVLPGIEVRIGDDQE-----------LQVSGPVVMRGYWNRP 471
Query: 308 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 367
T +A DGWL TGD I GR R ++GR K+ IV STGE V P ++
Sbjct: 472 EDTAKAFTADGWLRTGDQAAI----ENGRIR-------IKGRIKEIIVTSTGEKVPPNDV 520
Query: 368 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLL 427
E+A L L Q+ V+G+D+ I V + E + A+ + + DAS L
Sbjct: 521 EQAILVDPLFEQVFVVGEDRPFIACIAVVSQMEWEVLARSVGLNPDDASSLHHAAAEREA 580
Query: 428 YGELRKWTSKCSFQIGP--IHVVDEPFTVN 455
+ K T + P IH+V + ++++
Sbjct: 581 LARIEKQTRSFARYAVPRAIHLVRDSWSID 610
>gi|90411921|ref|ZP_01219929.1| putative long-chain-fatty-acid-CoA ligase [Photobacterium profundum
3TCK]
gi|90327179|gb|EAS43551.1| putative long-chain-fatty-acid-CoA ligase [Photobacterium profundum
3TCK]
Length = 604
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 129/402 (32%), Positives = 194/402 (48%), Gaps = 47/402 (11%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+ T +YTSGTTG PKGVML + N+ Q+ + + GD L LP HV+ERA
Sbjct: 178 DDLLTLIYTSGTTGTPKGVMLDYANIAAQLVGHDQNLSLDEGDTSLCFLPLSHVFERAWT 237
Query: 85 YFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
+++ RG I T LK+ L +P+ M +VP VYE +YS + ++ + R++V
Sbjct: 238 FYVLHRGAINHYLTDTNQLKEALAEVKPNVMAAVPRVYEKIYSTVHDKVSRAPFHRKLV- 296
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
++A R+ C + +QPS L+ + H LA K+V
Sbjct: 297 -----FTWAVNMGARM--AVC-HQEHRQPSKLLTMS---------------HNLANKVVL 333
Query: 204 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K++ +G + K GG L I F+ AIG+ V++GYG+TE++ ++ C
Sbjct: 334 SKLRDILGGNIKFMPCGGAKLDESIGRFFHAIGINVKLGYGMTETTATVSCWDDQCFNPD 393
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G + EIKI E NE+L VRG VM+GY+ P T + EDG+L T
Sbjct: 394 SIGMAMPGAEIKI--GENNEIL---------VRGPMVMRGYYNMPEETAKNFTEDGFLKT 442
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD G G L + R K+ + S G+ + P +E A + I QI V
Sbjct: 443 GDAGHFDEQ----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAV 492
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 424
I ++ A+IVP + + A+ L+I + D EL K I
Sbjct: 493 IADTRKFVSALIVPCFDTLEEHARELNIKYHDRLELVKNSQI 534
>gi|423332199|ref|ZP_17309983.1| hypothetical protein HMPREF1075_01996 [Parabacteroides distasonis
CL03T12C09]
gi|409229322|gb|EKN22199.1| hypothetical protein HMPREF1075_01996 [Parabacteroides distasonis
CL03T12C09]
Length = 633
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 127/429 (29%), Positives = 216/429 (50%), Gaps = 54/429 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
+++G+DD AT YTSGTT +PKGV+LTH+N + V ++ + L +LP H +
Sbjct: 173 QSLGNDDYATITYTSGTTADPKGVILTHRNYTANVEQALTCVDIDDTWRTLVILPLDHCF 232
Query: 80 ERACGYFIF-SRG-----IELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQK 130
G++IF S+G +++ T + LK+ +++ ++P ++SVP + + I++
Sbjct: 233 AHVVGFYIFMSKGASVATVQVGRTGMETLKNIPVNIKEFKPDLILSVPALAKNFKKNIEQ 292
Query: 131 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 190
I + +RI + Y EG RI +
Sbjct: 293 GIRARGKNAVRLFNLALRIGYIYNGDSDEEEGKGF-------------------RI---L 330
Query: 191 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
L PL L +KL++ K++ G K + GG L + FY A+G+ + GYGL+E++P
Sbjct: 331 LKPLVRLFDKLLFAKVRENFGGELKFFIGGGALLDKDLQKFYYALGIPMYQGYGLSEATP 390
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
+I+ P +V GS G + ++KI D + N VLP G KG + +RG VM GY+KNP++
Sbjct: 391 IISTNGPRRHVFGSSGVLVRPLDLKICDMDGN-VLPPGEKGEIVIRGENVMAGYWKNPAS 449
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T + E GWL TGD+G++ G+L + GR K ++ S GE P +EE
Sbjct: 450 TADTVKE-GWLYTGDMGYMR-----------DGLLYVLGRFKSLLIGSDGEKYSPEGIEE 497
Query: 370 AALR-SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD---ASELSKEKTIS 425
A + SS I Q+++ A++VP+KE + R + H + S+ +E+ I
Sbjct: 498 ALVEHSSCIDQLILYNNQSPYTTALLVPNKERL-----RKHLAHQNLDLTSDQGREEAIR 552
Query: 426 LLYGELRKW 434
++ ++ ++
Sbjct: 553 IIQRQIDRF 561
>gi|83815592|ref|YP_446479.1| AMP-binding protein [Salinibacter ruber DSM 13855]
gi|83756986|gb|ABC45099.1| AMP-binding enzyme, putative [Salinibacter ruber DSM 13855]
Length = 632
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 135/457 (29%), Positives = 212/457 (46%), Gaps = 57/457 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E+I D + +YTSGTTG PKGV+LTH+N ++ +P D LS LP H +
Sbjct: 180 ESIAPGDTSALIYTSGTTGQPKGVVLTHRNFCSNVKGALRRIPIGEDDHHLSFLPLSHAF 239
Query: 80 ERACGYF-IFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
ER G+ + + G + Y ++ + +LQ QP MISVP ++E +Y + KQ
Sbjct: 240 ERTAGHTAVLAAGATISYAESIEAVSQNLQEVQPTLMISVPRMFEKVYKRVTKQAKEGGP 299
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
++ + +A +R E + P+ L L +
Sbjct: 300 LKQAL------FDWAVGVGERHAE--AQQKTGSGPNLL---------------LRGQRAV 336
Query: 198 AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 256
A +LV+ K+ +G + + SGG +LP I F++A GV + GYGLTE++PV+
Sbjct: 337 AHRLVFSKLHEKLGGNLRFAASGGAALPEEIGTFFQAAGVTIIEGYGLTETAPVLTINPL 396
Query: 257 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGS-------------KGIVKVRGSQVMQGY 303
G+VGH + + I E NE PAG+ +G + V+G VM+ Y
Sbjct: 397 DAPRYGTVGHVMPGVTVAIQPLEENE--PAGAVSGSDYPTSLSTPEGEILVKGPNVMKEY 454
Query: 304 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 363
+ P T+ A DGW +TGD+G R G L + R K IV G+NV
Sbjct: 455 WNQPEETRAAFGPDGWYHTGDVG-----------RFEEGYLKITDRIKHMIVTEGGKNVY 503
Query: 364 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA--DASELSKE 421
P +EE + I QIVV+G+ + A++VPD + + M A+ I + D +EL
Sbjct: 504 PGPIEETFKTKNWINQIVVVGEGRPFLAALVVPDFDALRMRARDEGIDESTCDDAELLHH 563
Query: 422 KTISLLYGELRKWTSKCSF---QIGPIHVVDEPFTVN 455
L+ ++ ++ + +I ++ EPFTV
Sbjct: 564 DAAQALFQDVFTAYNRDAAAHEKIRNFRLLGEPFTVE 600
>gi|313147826|ref|ZP_07810019.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|424665955|ref|ZP_18102991.1| hypothetical protein HMPREF1205_01830 [Bacteroides fragilis HMW
616]
gi|313136593|gb|EFR53953.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|404574208|gb|EKA78959.1| hypothetical protein HMPREF1205_01830 [Bacteroides fragilis HMW
616]
Length = 601
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 132/441 (29%), Positives = 213/441 (48%), Gaps = 54/441 (12%)
Query: 23 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM--LPPWHVYE 80
G+DD+A +YTSGTTG PKGVML H L R ++DI + DK +SM LP HV+E
Sbjct: 178 GADDLANILYTSGTTGEPKGVMLHHSCYLEAFR-IHDIRLVDMTDKDVSMNFLPLTHVFE 236
Query: 81 RACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
+A Y +G+++ + +++ ++ +P M SVP +E +Y+G+Q++I ++ +
Sbjct: 237 KAWTYLCVHKGVQVCINLRPADIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKIAETTGIK 296
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+++ I++ RI+ R K P ++ L + E
Sbjct: 297 KMLMLDAIKVG-------RIH-NLEYLRVGKTPPKMIQL---------------KYKFYE 333
Query: 200 KLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
K +Y ++ IGI + G ++P I F ++G+ + VGYGLTES+ ++ T
Sbjct: 334 KTIYALLKKTIGIENGNFFPTAGAAVPDEICEFVHSVGIDMLVGYGLTESTATVSCTSKT 393
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
+GSVG + E+KI E NE+L +RG + +GY+K AT A+DE+
Sbjct: 394 GYDIGSVGQVMPEVEVKI--GEDNEIL---------LRGKTITKGYYKKAEATAAAIDEE 442
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GW +TGD G+ G L L R KD S G+ + P LE + I
Sbjct: 443 GWFHTGDAGYFK-----------NGQLYLTERIKDLFKTSNGKYIAPQALETKLVIDRYI 491
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS 436
QI +I ++ A+IVP V AK I + D +EL + K I+L +
Sbjct: 492 DQIAIIADQRKFVSALIVPVYGFVKQYAKEKGIEYKDMTELLEHPKIIALFRARIDTLQQ 551
Query: 437 KCSF--QIGPIHVVDEPFTVN 455
+ + QI ++ EPF++
Sbjct: 552 QFAHYEQIKRFTLLPEPFSME 572
>gi|407648283|ref|YP_006812042.1| acyl-CoA synthetase [Nocardia brasiliensis ATCC 700358]
gi|407311167|gb|AFU05068.1| acyl-CoA synthetase [Nocardia brasiliensis ATCC 700358]
Length = 597
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 128/390 (32%), Positives = 187/390 (47%), Gaps = 57/390 (14%)
Query: 16 HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS----LYDIVPAENGDKFLS 71
H + + + ++ AT +YTSGTTG PKGVML+H NL + RS L + + G K L
Sbjct: 171 HDRRKQVNANSPATLIYTSGTTGRPKGVMLSHANLYAESRSDRIALAKFI--QPGKKTLM 228
Query: 72 MLPPWHVYERACGYFIFSRGIELMYTAV-RNLKDDLQRYQPHYMISVPLVYETLYSGIQK 130
LP HV+ RA F + + +T+ L D Y+PH+++SVP V+E +++G ++
Sbjct: 229 FLPLAHVFARAVALVAFDAKVIVAHTSDWSTLVDQFGSYRPHFILSVPRVFEKVFNGAKQ 288
Query: 131 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 190
+ + A A I+++ A G L
Sbjct: 289 KAHDGGKGKIFDAAAETAIAYS-EALDNGGAGLVLKLK---------------------- 325
Query: 191 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
H L +KLVY K++ A+G A VSGGG L + F+ +GV + GYGLTE++
Sbjct: 326 ----HALFDKLVYSKLRVALGGQCDAAVSGGGPLGARLGHFFRGVGVTIYEGYGLTETTA 381
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
+ P +G+VG PI KI AE E+L +RGS V GY+ N A
Sbjct: 382 AVTVNTPEKIRVGTVGRPIEGHSAKI--AEDGELL---------LRGSVVFDGYWGNAEA 430
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T+ A DGW TGD+G I G + + GR K+ IV + G+NV P LE+
Sbjct: 431 TEDAF-ADGWFKTGDLGAI----------DADGFITITGRKKELIVTAGGKNVSPALLED 479
Query: 370 AALRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
+ LI Q++V+G Q GA+I D E
Sbjct: 480 SLRAHPLISQVMVVGDGQPFIGALITLDPE 509
>gi|371776873|ref|ZP_09483195.1| amp-dependent synthetase and ligase [Anaerophaga sp. HS1]
Length = 635
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 124/424 (29%), Positives = 209/424 (49%), Gaps = 48/424 (11%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I +D+A YTSGTT PKG+ML+H+N + + + + + L++LP H +
Sbjct: 172 IHYNDVANISYTSGTTAQPKGIMLSHRNYTANVEQAFSYIDIPSHYRTLAVLPWDHAFAH 231
Query: 82 ACGYFIFS-RGIEL--------MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
+ F RG + ++N +++ +PH ++SVP + + I+K +
Sbjct: 232 TAALYAFMYRGASIASVQAGKTQLETLKNFAQNIREIKPHVLMSVPAIAKNFRKNIEKGV 291
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
A+ V L R++ Y + Y G R + + + +
Sbjct: 292 M----AKGKVIYTLFRVAMKYAVW---YNGTGNNR----------------GKGLKKLTY 328
Query: 193 PLHLLAEKLVYKKIQSAIGISKAGVSGGGSL-PMHIDLFYEAIGVKVQVGYGLTESSPVI 251
PL+ L + L++K I++ G + GGG+L + + F+ AIG+ + GYGL+E+SP+I
Sbjct: 329 PLYYLFDNLIFKTIRANFGGNLQFFIGGGALLDIELQKFFYAIGIPMYQGYGLSEASPII 388
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 311
+A P + +GS G +N+ +IKI D E+ + LP G G + ++G VM GY+KN ATK
Sbjct: 389 SANTPAHHKMGSSGRTVNNLDIKICD-ESGKALPPGQSGEIVIKGENVMLGYWKNEEATK 447
Query: 312 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 371
+ + ++GWL TGD+G++ G L + GR K ++ S GE P +EEA
Sbjct: 448 ETI-KNGWLYTGDLGYLDKD----------GYLYVLGRFKSLLISSDGEKYSPEGIEEAV 496
Query: 372 L-RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
+ LI Q V+ +IVP+ E+V+ K LS + E EKT+ + E
Sbjct: 497 IDHCELIDQCVLHNNQNPYTIGLIVPNAEKVVQYFKSLS--NHLTKEQKLEKTLLAIQEE 554
Query: 431 LRKW 434
L ++
Sbjct: 555 LSQF 558
>gi|183602191|ref|ZP_02963559.1| probable long-chain-fatty acid CoA ligase [Bifidobacterium animalis
subsp. lactis HN019]
gi|241191423|ref|YP_002968817.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|241196829|ref|YP_002970384.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|384194421|ref|YP_005580167.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis BLC1]
gi|384195985|ref|YP_005581730.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis V9]
gi|387821287|ref|YP_006301330.1| long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis B420]
gi|387822973|ref|YP_006302922.1| long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis Bi-07]
gi|423679955|ref|ZP_17654831.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis BS 01]
gi|183218684|gb|EDT89327.1| probable long-chain-fatty acid CoA ligase [Bifidobacterium animalis
subsp. lactis HN019]
gi|240249815|gb|ACS46755.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|240251383|gb|ACS48322.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|295794416|gb|ADG33951.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis V9]
gi|345283280|gb|AEN77134.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis BLC1]
gi|366040954|gb|EHN17467.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis BS 01]
gi|386653988|gb|AFJ17118.1| Long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis B420]
gi|386655581|gb|AFJ18710.1| Long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis Bi-07]
Length = 606
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 184/384 (47%), Gaps = 52/384 (13%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDKFLSMLPPWHV 78
++ +DD+AT VYTSG+TG PKG L+H+N + R+ D VP E + L LP H
Sbjct: 178 SVNADDLATIVYTSGSTGTPKGAELSHRNFVSITRAAADCVPEVLEGNSRLLLFLPLAHC 237
Query: 79 YERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
+ R YF F+ G+ + + L D+Q ++P ++++VP V+E +Y+ ++ T
Sbjct: 238 FARFIQYFAFTSDAGVIGYLPSTKTLPHDMQVFEPTFVLAVPRVFEKVYNAASRKAGTGW 297
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
R+ A++ + FA + G T QK H
Sbjct: 298 KG-RLFAKS---VEFAREWTEMEQAGIAPTPKQKAE----------------------HA 331
Query: 197 LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
+ EKLVY I+SA G K GG L + F+ IG+ + GYGLTE++ A R
Sbjct: 332 MYEKLVYSTIRSAFGPRIKYLACGGAPLDRKLATFFNGIGLTMIQGYGLTETAAPFAFTR 391
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
NV+G+VG P+ + ++I G ++V+G V GY P T +
Sbjct: 392 VHDNVIGTVGQPVPGSSVRI-----------SPTGELEVKGQNVFLGYHNLPEKTTETFA 440
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
EDGWL TGD+ I G + L GRAKD I+ + G+NV P+ +E+
Sbjct: 441 EDGWLKTGDLASIDDE----------GHITLTGRAKDIIITAGGKNVSPIPMEQEISTCP 490
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKE 399
++ VV+G ++ GA+I D+E
Sbjct: 491 IVEHAVVVGDNRPFVGAVITLDQE 514
>gi|345870330|ref|ZP_08822283.1| Long-chain-fatty-acid--CoA ligase [Thiorhodococcus drewsii AZ1]
gi|343921902|gb|EGV32611.1| Long-chain-fatty-acid--CoA ligase [Thiorhodococcus drewsii AZ1]
Length = 605
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 122/373 (32%), Positives = 188/373 (50%), Gaps = 48/373 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+ +AT VYTSGTTG PKGVML+H N+L + ++ D FLS LP H+ ER G
Sbjct: 186 NSLATIVYTSGTTGRPKGVMLSHHNMLANAHGVITLINVYREDVFLSFLPLSHMLERTGG 245
Query: 85 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y++ G + Y ++ L +D+Q +P +I+VP V+E +Y I Q+ T AA R +
Sbjct: 246 YYLPLMAGATVAYARSIAQLAEDMQTIRPTVIIAVPRVFERIYQRIADQLETKPAAVRWL 305
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
+++ + +F+R R P+ L LWP L K+
Sbjct: 306 FNTAVKV--GWRSFQR-----TQGRAGWHPTLL---------------LWP--FLRHKVG 341
Query: 203 YKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
++ G +A VSGG +LP + + +G+ + GYGLTE+SPV++ N+
Sbjct: 342 APVLERLGGRIRAAVSGGAALPNSVARTFIGLGLPLIQGYGLTETSPVVSVNPLQANIPD 401
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
SVG PI +++I G+ ++++G VM GY+ N +AT + L +DGW +T
Sbjct: 402 SVGPPIRGIKVRI-----------GADDELQIKGHCVMMGYWNNHAATAKVLSQDGWFHT 450
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD ++R G + + GR KD +VLS GE V P +LE A L Q VV
Sbjct: 451 GD-----------QARIENGRVYITGRLKDILVLSNGEKVPPGDLELAISLDPLFDQTVV 499
Query: 383 IGQDQRRPGAIIV 395
+G+ A++V
Sbjct: 500 LGEGHSYLTALLV 512
>gi|315223493|ref|ZP_07865349.1| long-chain-fatty-acid--CoA ligase [Capnocytophaga ochracea F0287]
gi|420160444|ref|ZP_14667227.1| AMP-binding enzyme [Capnocytophaga ochracea str. Holt 25]
gi|314946528|gb|EFS98520.1| long-chain-fatty-acid--CoA ligase [Capnocytophaga ochracea F0287]
gi|394760638|gb|EJF43152.1| AMP-binding enzyme [Capnocytophaga ochracea str. Holt 25]
Length = 599
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 129/414 (31%), Positives = 214/414 (51%), Gaps = 49/414 (11%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHVYERAC 83
DD+ T +YTSGTTG PKGVMLT++NL Q+ + + +N D L+ LP HV+ERA
Sbjct: 180 DDLFTIIYTSGTTGEPKGVMLTYENLAFQMVGHTERLSTVDNTDTSLAFLPLSHVFERAW 239
Query: 84 GYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
YF + + + Y NL ++ L +P M +VP YE +++ + + SS V
Sbjct: 240 TYFCLYKAVTVYYLDDTNLVREALAEVRPTLMCAVPRFYEKIFATVHDRADASS----FV 295
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
R L R++ A KR+ L K+PS+ +L + +K+V
Sbjct: 296 KRKLFRLAIA--TGKRV---LALREQGKKPSF---------------VLQKAYNFFDKMV 335
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
YKK++ A+G K GG +L I F+++IG+ +++GYG+TE++ I+
Sbjct: 336 YKKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINLKLGYGMTETTATISCWGDDRINP 395
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
SVG+ + + +++I E NE+L V+G VM+GY+KNP T +A DG+L
Sbjct: 396 QSVGNVMPNVQVRI--GEENEIL---------VKGGMVMKGYYKNPEETAKAFTPDGYLR 444
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD G + +++ L + R K+ + S G+ + P +E + +LI QI
Sbjct: 445 TGDAGNLDGNNN----------LFITERIKELMKTSNGKYIAPQMIEGKVGKYNLIEQIA 494
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK-EKTISLLYGELRKW 434
VI ++ A+IVP+ E + A K L+I + +++ K + I + +L+K+
Sbjct: 495 VIADGKKFVSALIVPNYEMLSQALKDLNIKCKNTADMIKHSQVIEYIGKQLQKF 548
>gi|167856072|ref|ZP_02478815.1| DNA polymerase III subunit chi [Haemophilus parasuis 29755]
gi|219871804|ref|YP_002476179.1| long chain fatty acid CoA ligase [Haemophilus parasuis SH0165]
gi|167852821|gb|EDS24092.1| DNA polymerase III subunit chi [Haemophilus parasuis 29755]
gi|219692008|gb|ACL33231.1| long chain fatty acid CoA ligase [Haemophilus parasuis SH0165]
Length = 595
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 129/406 (31%), Positives = 204/406 (50%), Gaps = 53/406 (13%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKF-LSMLPPWHVYERACG 84
D+ T +YTSGTTG PKGVML + NL HQ+ + +D+ N D LS LP H++ERA
Sbjct: 177 DLFTLIYTSGTTGEPKGVMLDYANLAHQLNA-HDLALNVNEDDVSLSFLPLSHIFERAWV 235
Query: 85 YFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
++F RG Y N ++D L +P M +VP YE +Y+ + ++ + A RR +
Sbjct: 236 AYVFHRGATNCYLEDTNHVRDALTTLKPTVMCAVPRFYEKIYTAVWDKVEKAPAHRRALF 295
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
IR+ ++ Y+ +QPS W R+ A LA+KLV
Sbjct: 296 NWAIRVG------EKHYQT-------EQPSQ--------WLRLQYA-------LADKLVL 327
Query: 204 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K+++ +G K GG L I F+ +IG+ +++GYG+TE++ ++ +
Sbjct: 328 TKLRALLGGRIKMMPCGGAKLEASIGSFFHSIGINIKLGYGMTETTATVSCWQDKGFNPN 387
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G + + E+KI E NE+L VRG VM+GY+K P T +A EDG+L T
Sbjct: 388 SIGTLMPNAEVKI--GEENEIL---------VRGGMVMRGYYKKPEETAKAFTEDGFLRT 436
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD+G + CG + + + R K+ + G+ + P +E + I QI V
Sbjct: 437 GDVGEMDS---------CGNLFITD-RLKELMKTLNGKYIAPQYIEGKIGKDKFIEQIAV 486
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
I ++ A+IVP + + AK+L+I + D EL K I ++
Sbjct: 487 IADAKKYVSALIVPCFDSLEEYAKQLNIKYQDRIELIKHSDIIQMF 532
>gi|83815604|ref|YP_445334.1| acyl-CoA synthetase, long-chain-fatty acid:CoA ligase [Salinibacter
ruber DSM 13855]
gi|83756998|gb|ABC45111.1| putative acyl-CoA synthetase, long-chain-fatty acid:CoA ligase
[Salinibacter ruber DSM 13855]
Length = 632
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 133/418 (31%), Positives = 198/418 (47%), Gaps = 65/418 (15%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNL----LHQIRSLYDIVPAENGDKFLSMLPPWH 77
I D+AT +YTSGTTG PKGVML+H+N+ + I + D G+ +S LP H
Sbjct: 196 IDPQDLATIIYTSGTTGRPKGVMLSHENISSNAITSIAEIDDFETGPEGEVVISFLPLTH 255
Query: 78 VYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
V+ R Y RGI + + +L D L + +P SVP V E +Y+GI+K++
Sbjct: 256 VFARMLQYAYMMRGISIYFAHPDDLVDALPKVRPTVFASVPRVLEKVYAGIKKKVMGMQG 315
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
++ + ++++ Y +TR+Q PL+ L
Sbjct: 316 LQKRIGEWGLQVAQDYD----------MTRSQP----------------------PLYAL 343
Query: 198 ----AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
A++LV++K ++A G K V GG +L + A + GYGLTE+SPVI+
Sbjct: 344 KRAAADRLVFRKWRAAFGGRVKYVVVGGAALQPDLANILAAADITTLQGYGLTETSPVIS 403
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
RP N G+VG P+ E+KI AE E+L RG VMQGY+K P T
Sbjct: 404 YTRPQRNKPGTVGEPLPGVEVKI--AEDGEIL---------TRGPHVMQGYYKAPDETDA 452
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
++E+GWL+TGDIG G L + R K LSTG+ V P +E
Sbjct: 453 VMEENGWLHTGDIGEFDED----------GFLKITDRKKALFKLSTGKYVMPQPIENRMG 502
Query: 373 RSSLIRQIVVIGQDQRRPGAII--VPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
L+ VV+G+D++ A++ PD+ + L + + L D +L E I Y
Sbjct: 503 SDPLVDNAVVVGRDRKFCAALLFPAPDQAQALASERGLG-AERDIEDLLTEPDIVNAY 559
>gi|91227124|ref|ZP_01261608.1| putative long-chain-fatty-acid-CoA ligase [Vibrio alginolyticus
12G01]
gi|91188776|gb|EAS75063.1| putative long-chain-fatty-acid-CoA ligase [Vibrio alginolyticus
12G01]
Length = 602
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 130/431 (30%), Positives = 207/431 (48%), Gaps = 55/431 (12%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 83
DD+ T +YTSGTTG PKGVML + N+ Q+ + D L LP HV+ERA
Sbjct: 177 EDDLLTLIYTSGTTGQPKGVMLDYANIAAQLEGHDQRLSLSQSDVSLCFLPLSHVFERAW 236
Query: 84 GYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
+++ +G Y ++D L + +P M +VP YE ++S I +++ + R+++
Sbjct: 237 TFYVLYKGATNCYLQDTMQVRDALSQVRPTVMCAVPRFYEKIFSAIHEKVSRAPIHRKIM 296
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
+ + A C + ++QPS L L + LA+KLV
Sbjct: 297 FTWAVNMGAKMAA--------C-HQEKRQPSLL---------------LRKSYALADKLV 332
Query: 203 YKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++ C
Sbjct: 333 LSKLRALLGGQINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDKCFNP 392
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
S+G + ++KI E NE+L VRG VM+GY+K P T++ DE G+L
Sbjct: 393 DSIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETEKTFDEHGFLK 441
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD G+I + G L + R K+ + S G+ + P +E A + I QI
Sbjct: 442 TGDAGYIDEN----------GNLFITDRIKELMKTSGGKYIAPQMIEGAIGKDHFIEQIA 491
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRK 433
VI ++ A+IVP + + AK L+I + D EL K EK ++ L EL K
Sbjct: 492 VIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQVVEMLEKRVNDLQKELAK 551
Query: 434 WTSKCSFQIGP 444
+ F++ P
Sbjct: 552 FEQVKKFKLLP 562
>gi|384190057|ref|YP_005575805.1| long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis BB-12]
gi|384192846|ref|YP_005578593.1| long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis CNCM I-2494]
gi|289177549|gb|ADC84795.1| Long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis BB-12]
gi|340365583|gb|AEK30874.1| Long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis CNCM I-2494]
Length = 629
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 184/384 (47%), Gaps = 52/384 (13%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDKFLSMLPPWHV 78
++ +DD+AT VYTSG+TG PKG L+H+N + R+ D VP E + L LP H
Sbjct: 201 SVNADDLATIVYTSGSTGTPKGAELSHRNFVSITRAAADCVPEVLEGNSRLLLFLPLAHC 260
Query: 79 YERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
+ R YF F+ G+ + + L D+Q ++P ++++VP V+E +Y+ ++ T
Sbjct: 261 FARFIQYFAFTSDAGVIGYLPSTKTLPHDMQVFEPTFVLAVPRVFEKVYNAASRKAGTGW 320
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
R+ A++ + FA + G T QK H
Sbjct: 321 KG-RLFAKS---VEFAREWTEMEQAGIAPTPKQKAE----------------------HA 354
Query: 197 LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
+ EKLVY I+SA G K GG L + F+ IG+ + GYGLTE++ A R
Sbjct: 355 MYEKLVYSTIRSAFGPRIKYLACGGAPLDRKLATFFNGIGLTMIQGYGLTETAAPFAFTR 414
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
NV+G+VG P+ + ++I G ++V+G V GY P T +
Sbjct: 415 VHDNVIGTVGQPVPGSSVRI-----------SPTGELEVKGQNVFLGYHNLPEKTTETFA 463
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
EDGWL TGD+ I G + L GRAKD I+ + G+NV P+ +E+
Sbjct: 464 EDGWLKTGDLASIDDE----------GHITLTGRAKDIIITAGGKNVSPIPMEQEISTCP 513
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKE 399
++ VV+G ++ GA+I D+E
Sbjct: 514 IVEHAVVVGDNRPFVGAVITLDQE 537
>gi|301310729|ref|ZP_07216668.1| putative long-chain-fatty-acid--CoA ligase [Bacteroides sp. 20_3]
gi|423336979|ref|ZP_17314726.1| hypothetical protein HMPREF1059_00678 [Parabacteroides distasonis
CL09T03C24]
gi|300832303|gb|EFK62934.1| putative long-chain-fatty-acid--CoA ligase [Bacteroides sp. 20_3]
gi|409239161|gb|EKN31947.1| hypothetical protein HMPREF1059_00678 [Parabacteroides distasonis
CL09T03C24]
Length = 633
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 124/429 (28%), Positives = 215/429 (50%), Gaps = 54/429 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
+++G+DD AT YTSGTT +PKGV+LTH+N + V ++ + L +LP H +
Sbjct: 173 QSLGNDDYATITYTSGTTADPKGVILTHRNYTANVEQALTCVDIDDTWRTLVILPLDHCF 232
Query: 80 ERACGYFIF-SRG-----IELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQK 130
G++IF S+G +++ T + LK+ +++ ++P+ ++SVP + + I++
Sbjct: 233 AHVVGFYIFMSKGASVATVQVGRTGMETLKNIPINIKEFKPYLILSVPALAKNFKKNIEQ 292
Query: 131 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 190
I + +RI + Y EG + +
Sbjct: 293 GIRARGKNAVRLFNLALRIGYIYNGDSDEEEG----------------------KGFRVL 330
Query: 191 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
L PL L +KL++ K++ G K + GG L + FY A+G+ + GYGL+E++P
Sbjct: 331 LKPLVRLFDKLLFAKVRENFGGELKFFIGGGALLDKDLQKFYYALGIPMYQGYGLSEATP 390
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
+I+ P + GS G + ++KI D + N VLP G KG + +RG VM GY+KNP++
Sbjct: 391 IISTNGPRRHTFGSSGVLVRPLDLKICDMDGN-VLPPGEKGEIVIRGENVMAGYWKNPAS 449
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T + E GWL TGD+G++ G+L + GR K ++ S GE P +EE
Sbjct: 450 TADTVKE-GWLYTGDMGYMR-----------DGLLYVLGRFKSLLIGSDGEKYSPEGIEE 497
Query: 370 AALR-SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD---ASELSKEKTIS 425
A + SS I Q+++ A++VP+KE + R + H + S+ +E+ I
Sbjct: 498 ALVEHSSCIDQLILYNNQSPYTTALLVPNKERL-----RKHLAHQNLDLTSDQGREEAIR 552
Query: 426 LLYGELRKW 434
++ ++ ++
Sbjct: 553 IIQRQIDRF 561
>gi|453382146|dbj|GAC83353.1| putative fatty-acid--CoA ligase [Gordonia paraffinivorans NBRC
108238]
Length = 612
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 128/427 (29%), Positives = 210/427 (49%), Gaps = 50/427 (11%)
Query: 19 YETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHV 78
++ + DD+AT +YTSGTTG PKGV +TH+N++ ++ SL DIV A D+ +S LP H+
Sbjct: 172 WQAVEPDDLATLIYTSGTTGPPKGVEITHRNIIAELASLADIVDAGFDDRAISYLPAAHI 231
Query: 79 YERACGYFI-FSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
+R + RGI+L R + L +P + VP V++ + +GI+
Sbjct: 232 ADRVSSHAANMVRGIQLTTVPDPREIAAALPEVRPTFFFGVPRVWQKIRAGIEA------ 285
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
R+ + K+ G+ L K +A R + + H
Sbjct: 286 -----------RLGEETSPVKKALAGWALGMGTKAADARLA------GRELGVLDRIGHE 328
Query: 197 LAEKLVYKKIQSAIGISKAGVSGGGS--LPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
LA++L+ K+++A+G+ + +G G+ +P+ + ++ +G+ V +G++E++ V
Sbjct: 329 LADRLILHKVRAALGLDEVDFAGSGAAAIPLEVLKYFLGLGLPVLEVWGMSETTGVSTMT 388
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
P +G+VG PI E+K+ AE E+L VRG VM GY K P T + +
Sbjct: 389 TPDDLKIGTVGKPIRGIEVKL--AEDGELL---------VRGPVVMNGYRKQPDKTAETI 437
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR- 373
D DGWL TGDI I G + + R K+ I+ +G+N+ P +E
Sbjct: 438 DPDGWLATGDIATI----------DADGHVTIVDRKKELIINESGKNMSPTNIENTMKAV 487
Query: 374 SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI-SLLYGELR 432
SSLI Q+V IG + A++V D E V AKRL++ +ELS I + G +R
Sbjct: 488 SSLIAQVVAIGDGEPYVSALVVLDPEAVEAYAKRLNLGQGGFAELSSHPAIVEEITGAIR 547
Query: 433 KWTSKCS 439
+ ++ S
Sbjct: 548 EGNTRLS 554
>gi|256839560|ref|ZP_05545069.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|256738490|gb|EEU51815.1| conserved hypothetical protein [Parabacteroides sp. D13]
Length = 633
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 124/429 (28%), Positives = 214/429 (49%), Gaps = 54/429 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
+++G+DD AT YTSGTT +PKGV+LTH+N + V ++ + L +LP H +
Sbjct: 173 QSLGNDDYATITYTSGTTADPKGVILTHRNYTANVEQALTCVDIDDTWRTLVILPLDHCF 232
Query: 80 ERACGYFIF-SRG-----IELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQK 130
G++IF S+G +++ T + LK+ +++ ++P+ ++SVP + + I++
Sbjct: 233 AHVVGFYIFMSKGASVATVQVGRTGMETLKNIPINIKEFKPYLILSVPALAKNFKKNIEQ 292
Query: 131 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 190
I + +RI + Y EG +
Sbjct: 293 GIRAQGKNAVRLFNLALRIGYIYNGDSDEEEG----------------------KGFRVF 330
Query: 191 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
L PL L +KL++ K++ G K + GG L + FY A+G+ + GYGL+E++P
Sbjct: 331 LKPLIRLFDKLLFTKVRENFGGELKFFIGGGALLDKDLQKFYYALGIPMYQGYGLSEATP 390
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
+I+ P + GS G + ++KI D + N VLP G KG + +RG VM GY+KNP++
Sbjct: 391 IISTNGPRRHTFGSSGVLVRPLDLKICDMDGN-VLPPGEKGEIVIRGENVMAGYWKNPAS 449
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T + E GWL TGD+G++ G+L + GR K ++ S GE P +EE
Sbjct: 450 TADTVKE-GWLYTGDMGYMR-----------DGLLYVLGRFKSLLIGSDGEKYSPEGIEE 497
Query: 370 AALR-SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD---ASELSKEKTIS 425
A + SS I Q+++ A++VP+KE + R + H + S+ +E+ I
Sbjct: 498 ALVEHSSCIDQLILYNNQSPYTTALLVPNKERL-----RKHLAHQNLDLTSDQGREEAIR 552
Query: 426 LLYGELRKW 434
++ ++ ++
Sbjct: 553 IIQRQIDRF 561
>gi|255531463|ref|YP_003091835.1| AMP-dependent synthetase and ligase [Pedobacter heparinus DSM 2366]
gi|255344447|gb|ACU03773.1| AMP-dependent synthetase and ligase [Pedobacter heparinus DSM 2366]
Length = 637
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 125/396 (31%), Positives = 198/396 (50%), Gaps = 50/396 (12%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVY 79
TI DI++ +YTSGTTG PKGVML+H N + ++ +P + + FLS LP HV+
Sbjct: 186 TILPADISSLIYTSGTTGTPKGVMLSHSNFVENVKVCLQQIPVIDETETFLSFLPLSHVF 245
Query: 80 ERACGYFIF-SRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
ER Y + ++G + Y ++ L ++ +P M VP + E ++ K + + +A
Sbjct: 246 ERTATYHVCCAQGCRIAYAQSLELLAKNMAEIKPTVMSCVPRLLEKIHD---KALKSGTA 302
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
+ ++ + +++I E K P ++ L
Sbjct: 303 GGGLKSKIFLWALEVGQDYRKIKEA------GKTPG---------------MVMRAKKTL 341
Query: 198 AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 256
AEKLV+ KI+ G K +SGG +LP ++ F+ +G+K+ G+GLTE+SPV+A
Sbjct: 342 AEKLVFSKIKEKTGGRLKFMISGGAALPKNVGEFFGNLGIKILEGFGLTETSPVMAVTEY 401
Query: 257 TCNVLGSVGHPINHTEIKIVDAETNEVLP-----------AGSKGIVKVRGSQVMQGYFK 305
V G+VG I E+ I D ET +++ ++G + VRG VMQGYF
Sbjct: 402 HRQVYGTVGRIIPGIEVGIQDIETRQMISIQTHDTFMEDFECAEGEIIVRGHCVMQGYFN 461
Query: 306 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 365
P+ T + +D+D W +TGDIG R G L + R K+ IV + G+NV P
Sbjct: 462 KPAETAEVIDKDNWFHTGDIG-----------RFYRGNLQITDRLKNMIVNAYGKNVYPT 510
Query: 366 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 401
+E L+S I QI +IG + AI++P+KE +
Sbjct: 511 PVENIYLKSLKIDQIFLIGDKREYLTAIVIPNKENL 546
>gi|448414933|ref|ZP_21577882.1| amp-forming long-chain acyl-CoA synthetase [Halosarcina pallida JCM
14848]
gi|445681630|gb|ELZ34060.1| amp-forming long-chain acyl-CoA synthetase [Halosarcina pallida JCM
14848]
Length = 677
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 133/424 (31%), Positives = 199/424 (46%), Gaps = 72/424 (16%)
Query: 17 YKYETIGSD--DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY----------DIVPA- 63
Y+ GSD D+A+ +YTSGTTG PKGV LTH+N + Y D VP
Sbjct: 204 YESWVDGSDPADLASLIYTSGTTGRPKGVKLTHRNFRSNVNQCYKRFAARPDKGDDVPVI 263
Query: 64 ENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVY 121
G LS LP HV+ER G+F+ F+ G + Y + L++D +P SVP VY
Sbjct: 264 GRGSVTLSFLPLAHVFERLAGHFMMFAAGACVAYAESPDTLREDFGLVRPTTGTSVPRVY 323
Query: 122 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 181
E LY I+ Q S RR+ +A + +E
Sbjct: 324 EKLYDAIRAQASESETKRRI-------FEWAVGVGREYHE-------------------- 356
Query: 182 LWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQV 240
A +L H +A++LV+++++ A+G +SGGGSL + Y A+G+ +
Sbjct: 357 --ADAPGVLLSAKHRVADRLVFEQVREALGGQIDFFISGGGSLSPDLCALYHAMGLPILE 414
Query: 241 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQ 298
GYGLTE+SPV+A P +G++G P+ E+++ D +V G G + VRG
Sbjct: 415 GYGLTETSPVVAVNPPEEPKIGTIGPPVTDVEVRLDDTVVGDVTGEAGGEVGELLVRGPN 474
Query: 299 VMQGYFKNPSATKQALDED---------------GWLNTGDIGWIAPHHSRGRSRRCGGV 343
V +GY+ P T+ A +D W TGD+ + P G
Sbjct: 475 VTEGYWNRPEETEAAFTDDVPGDDASEASEGENGPWFRTGDVVELRPD----------GY 524
Query: 344 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 403
+ RAK +VLSTG+NV P +E+A S +I Q +V+G ++ A++VP+ + V
Sbjct: 525 VAFRERAKQILVLSTGKNVAPGPIEDAFASSDVIEQCMVLGDGRKFVSALVVPNVDGVRE 584
Query: 404 AAKR 407
A R
Sbjct: 585 WADR 588
>gi|269964650|ref|ZP_06178888.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio alginolyticus
40B]
gi|269830549|gb|EEZ84770.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio alginolyticus
40B]
Length = 602
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 130/431 (30%), Positives = 207/431 (48%), Gaps = 55/431 (12%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 83
DD+ T +YTSGTTG PKGVML + N+ Q+ + D L LP HV+ERA
Sbjct: 177 EDDLLTLIYTSGTTGQPKGVMLDYANIAAQLEGHDQRLSLSQSDVSLCFLPLSHVFERAW 236
Query: 84 GYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
+++ +G Y ++D L + +P M +VP YE ++S I +++ + R+++
Sbjct: 237 TFYVLYKGATNCYLQDTMQVRDALSQVRPTVMCAVPRFYEKIFSAIHEKVSRAPIHRKIM 296
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
+ + A C + ++QPS L L + LA+KLV
Sbjct: 297 FTWAVNMGAKMAA--------C-HQEKRQPSLL---------------LRKSYALADKLV 332
Query: 203 YKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++ C
Sbjct: 333 LSKLRALLGGQINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDKCFNP 392
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
S+G + ++KI E NE+L VRG VM+GY+K P T++ DE G+L
Sbjct: 393 DSIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETEKTFDEHGFLK 441
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD G+I + G L + R K+ + S G+ + P +E A + I QI
Sbjct: 442 TGDAGYIDEN----------GNLFITDRIKELMKTSGGKYIAPQMIEGAIGKDHFIEQIA 491
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRK 433
VI ++ A+IVP + + AK L+I + D EL K EK ++ L EL K
Sbjct: 492 VIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQVVEMLEKRVNDLQKELAK 551
Query: 434 WTSKCSFQIGP 444
+ F++ P
Sbjct: 552 FEQVKKFKLLP 562
>gi|294507212|ref|YP_003571270.1| long-chain-fatty-acid--CoA ligase [Salinibacter ruber M8]
gi|294343540|emb|CBH24318.1| Long-chain-fatty-acid--CoA ligase [Salinibacter ruber M8]
Length = 632
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 133/418 (31%), Positives = 198/418 (47%), Gaps = 65/418 (15%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNL----LHQIRSLYDIVPAENGDKFLSMLPPWH 77
I D+AT +YTSGTTG PKGVML+H+N+ + I + D G+ +S LP H
Sbjct: 196 IDPQDLATIIYTSGTTGRPKGVMLSHENISSNAITSIAEIDDFETGPEGEVVISFLPLTH 255
Query: 78 VYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
V+ R Y RGI + + +L D L + +P SVP V E +Y+GI+K++
Sbjct: 256 VFARMLQYAYMMRGISIYFAHPDDLVDALPKVRPTVFASVPRVLEKVYAGIKKKVMGMQG 315
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
++ + ++++ Y +TR+Q PL+ L
Sbjct: 316 LQKRIGEWGLQVAQDYD----------MTRSQP----------------------PLYAL 343
Query: 198 ----AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
A++LV++K ++A G K V GG +L + A + GYGLTE+SPVI+
Sbjct: 344 KRAAADRLVFRKWRAAFGGRVKYVVVGGAALQPDLANILAAADITTLQGYGLTETSPVIS 403
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
RP N G+VG P+ E+KI AE E+L RG VMQGY+K P T
Sbjct: 404 YTRPQRNKPGTVGEPLPGVEVKI--AEDGEIL---------TRGPHVMQGYYKAPDETDA 452
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
++E+GWL+TGDIG G L + R K LSTG+ V P +E
Sbjct: 453 VMEENGWLHTGDIGEFDED----------GFLKITDRKKALFKLSTGKYVMPQPIENRMG 502
Query: 373 RSSLIRQIVVIGQDQRRPGAII--VPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
L+ VV+G+D++ A++ PD+ + L + + L D +L E I Y
Sbjct: 503 SDPLVDNAVVVGRDRKFCAALLFPAPDQAQALASERGLG-AERDIEDLLTEPDIVDAY 559
>gi|254229751|ref|ZP_04923159.1| putative long-chain-fatty-acid--CoA ligase homolog [Vibrio sp.
Ex25]
gi|262392424|ref|YP_003284278.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. Ex25]
gi|151937718|gb|EDN56568.1| putative long-chain-fatty-acid--CoA ligase homolog [Vibrio sp.
Ex25]
gi|262336018|gb|ACY49813.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. Ex25]
Length = 602
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 130/437 (29%), Positives = 209/437 (47%), Gaps = 55/437 (12%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ E DD+ T +YTSGTTG PKGVML + N+ Q+ + D L LP H
Sbjct: 171 RLEQAKEDDLLTLIYTSGTTGQPKGVMLDYANIAAQLEGHDQRLSLSQSDVSLCFLPLSH 230
Query: 78 VYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ERA +++ +G Y ++D L + +P M +VP YE ++S I +++ +
Sbjct: 231 VFERAWTFYVLYKGATNCYLQDTMQVRDALSQVRPTVMCAVPRFYEKIFSAIHEKVSRAP 290
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
R+++ + + A C + ++QPS + L +
Sbjct: 291 IHRKIMFTWAVNMGAKMAA--------C-HQEKRQPSLM---------------LRKSYA 326
Query: 197 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 327 LADKLVLSKLRALLGGQINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWD 386
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
C S+G + ++KI E NE+L VRG VM+GY+K P T++ D
Sbjct: 387 DKCFNPDSIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETEKTFD 435
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
E G+L TGD G+I + G L + R K+ + S G+ + P +E A +
Sbjct: 436 EHGFLKTGDAGYIDEN----------GNLFITDRIKELMKTSGGKYIAPQMIEGAIGKDH 485
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLL 427
I QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 486 FIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRVELIKHHQVVEMLEKRVNDL 545
Query: 428 YGELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 546 QKELAKFEQVKKFKLLP 562
>gi|373456317|ref|ZP_09548084.1| AMP-dependent synthetase and ligase [Caldithrix abyssi DSM 13497]
gi|371717981|gb|EHO39752.1| AMP-dependent synthetase and ligase [Caldithrix abyssi DSM 13497]
Length = 592
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 208/420 (49%), Gaps = 61/420 (14%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAEN------GDKFLSML 73
ETI +++ + VYTSGTTG PKGVML H+ + +DIV +E D FLS L
Sbjct: 167 ETIDPEELCSLVYTSGTTGEPKGVMLCHRGFV------FDIVQSEARLRLRADDVFLSFL 220
Query: 74 PPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P H+YER G++ RG + Y + + +D+ +P M+SVP +YE + + +Q++
Sbjct: 221 PLSHLYERLAGHWCPIYRGATIHYARGIDTVVEDIAVARPTIMVSVPRLYEKIANAMQEK 280
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
SSA +AR + S G L ++K+ + V WL R
Sbjct: 281 AEQSSA----LARNIFYWSI----------GTGLEYHEKRRAGKVN--KWLERR------ 318
Query: 192 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
+ LAEKLV+ K+++ +G + ++GG L + +EAIG+ + GYG+TE+ +
Sbjct: 319 ---YRLAEKLVFNKVKAKLGGRFRHPIAGGAPLSVETLKIFEAIGLPIIEGYGMTETHLI 375
Query: 251 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSAT 310
IA P GS G PI+ ++KI D G V V G +M+GY+ P T
Sbjct: 376 IALTPPGEVRYGSCGKPIDGIKVKIAD-----------DGEVLVSGPLLMKGYYNKPDIT 424
Query: 311 KQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA 370
K+ +D++GWL+TGDIG++ + L L R K+ IV S G+N+ P +E
Sbjct: 425 KEVIDDEGWLHTGDIGYLDEEN----------YLFLTDRKKNIIVTSGGKNIAPAPIEHK 474
Query: 371 ALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
S I ++ ++G ++ A++VP E + AK I L K + LY E
Sbjct: 475 LKTSKYIEEVCLVGDKRKFVSALVVPAYEILKEWAKSNKIDFDSMESLLKNDQVLKLYEE 534
>gi|54026677|ref|YP_120919.1| acyl-CoA synthetase [Nocardia farcinica IFM 10152]
gi|54018185|dbj|BAD59555.1| putative acyl-CoA synthetase [Nocardia farcinica IFM 10152]
Length = 597
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 126/390 (32%), Positives = 189/390 (48%), Gaps = 57/390 (14%)
Query: 16 HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP----AENGDKFLS 71
H + + +G+ AT +YTSGTTG PKGVML+H NL + S D + G K L
Sbjct: 171 HERRKQVGASSPATLIYTSGTTGRPKGVMLSHANLWAE--STADRIALGKYVTEGKKTLM 228
Query: 72 MLPPWHVYERACGYFIFSRGIELMYTAV-RNLKDDLQRYQPHYMISVPLVYETLYSGIQK 130
LP HV+ RA F + + +T+ L D ++PH+++SVP V+E +++G ++
Sbjct: 229 FLPLAHVFARAVALAAFDAKVIVAHTSDWTTLVDQFGAFKPHFILSVPRVFEKVFNGAKQ 288
Query: 131 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 190
+ + A A I ++ + P ++ L
Sbjct: 289 KAHDGGKGKIFDAAAATAIEYSEA------------LDNGGPGLVLKL------------ 324
Query: 191 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
H L +KLVY K+++A+G +A VSGGG L + F+ +GV + GYGLTE++
Sbjct: 325 ---KHALFDKLVYSKLKTALGGQCEAAVSGGGPLGARLGHFFRGVGVTIYEGYGLTETTA 381
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
+ P +GSVG PI KI AE E+L +RG V GY+ N +A
Sbjct: 382 AFSVNTPEHIRVGSVGRPIEGHAAKI--AEDGELL---------LRGPVVFNGYWGNEAA 430
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T++A DGW TGD+G I G + + GR K+ IV + G+NV P LE+
Sbjct: 431 TEEAF-ADGWFKTGDLGAI----------DADGFITITGRKKEIIVTAGGKNVSPALLED 479
Query: 370 AALRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
+ LI Q++V+G Q GA+I D E
Sbjct: 480 SLRAHPLISQVMVVGDGQPFIGALITLDPE 509
>gi|365879381|ref|ZP_09418805.1| putative Long-chain-fatty-acid--CoA ligase [Bradyrhizobium sp. ORS
375]
gi|365292632|emb|CCD91336.1| putative Long-chain-fatty-acid--CoA ligase [Bradyrhizobium sp. ORS
375]
Length = 641
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 124/373 (33%), Positives = 189/373 (50%), Gaps = 49/373 (13%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+A VYTSGTTG PKGVML H N++ +++++ + A + D FLS LP H +ER GY
Sbjct: 219 DLAAIVYTSGTTGRPKGVMLPHDNVVSNLKAIHQRLAAASEDVFLSFLPLSHTFERTAGY 278
Query: 86 FI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
+ + G + Y +V+ L +DL +P +ISVP +YE +YS + +S +A
Sbjct: 279 YYPIAIGASVAYARSVKQLPEDLLEVRPTILISVPRIYERIYSLVMHHRAVASP----LA 334
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
RAL+ ++ A + F + S L L WP L +++V
Sbjct: 335 RALMDMTIAVGGRR-----FDAQHGRGAQSALDRLA------------WP---LLKRIVA 374
Query: 204 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K+ + G + VSGG + + + A+G++V GYG+TE+SPV++ P N
Sbjct: 375 DKVLARFGGRLQVAVSGGAPIAEPVVRLFLALGLEVLQGYGMTETSPVVSVNTPDDNDPR 434
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
+VG + E++I G+ + VRG VM GY+ P T + + DGWL+T
Sbjct: 435 TVGRALPGVEVRI-----------GANDELMVRGPNVMLGYWHKPDETARIKEADGWLHT 483
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD I H R + + GR KD +V STGE + P +LE A L L Q +V
Sbjct: 484 GDQASI--DHGR---------ITITGRIKDILVTSTGEKIAPADLETAILTDPLFEQAIV 532
Query: 383 IGQDQRRPGAIIV 395
IG+++ AI+V
Sbjct: 533 IGENRPFLAAIVV 545
>gi|354610157|ref|ZP_09028113.1| Long-chain-fatty-acid--CoA ligase [Halobacterium sp. DL1]
gi|353194977|gb|EHB60479.1| Long-chain-fatty-acid--CoA ligase [Halobacterium sp. DL1]
Length = 644
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 136/419 (32%), Positives = 211/419 (50%), Gaps = 59/419 (14%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNL---LHQIRSLYDIVPA-------ENGDKFLSMLPP 75
D+A+ +YTSGTTG PKGV LTH+N L+Q R + P + + +S LP
Sbjct: 203 DLASLIYTSGTTGKPKGVTLTHENFRANLNQSRKRFGPRPDKQDGQSIDETSRVVSYLPL 262
Query: 76 WHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 133
HV ER G+F+ F+ G + Y + L++D QP SVP VYE L+ +++Q
Sbjct: 263 AHVLERLAGHFLMFASGAHVCYAESPDTLQEDFGLVQPTSGTSVPRVYEKLFDAVREQAT 322
Query: 134 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
S R+ +A + YE A +L
Sbjct: 323 ESPTKERI-------FEWAVDVGREYYE----------------------ADDPGLVLRG 353
Query: 194 LHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
+A++LV++K++ A+G + + +SGGGSL + Y IG+ + GYGLTE+SPV++
Sbjct: 354 KRAVADRLVFEKVRDALGGNVEFFISGGGSLSPELCALYHGIGLPILEGYGLTETSPVVS 413
Query: 253 ARRPTCNVLGSVGHPINHTEIKI---VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
+G++G P+ T++++ V + + AG G + VRG QV GY++ P A
Sbjct: 414 VNPAEEPKVGTIGPPVPGTDLELDESVASPEQQERTAGRAGELLVRGPQVFDGYWELPEA 473
Query: 310 TKQAL-DEDG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLE 366
T++A + DG W TGD+ I R G V LE RAK + LSTG+NV P
Sbjct: 474 TEEAFVERDGQEWFRTGDVVEI---------REDGYVRFLE-RAKQLLTLSTGKNVAPGP 523
Query: 367 LEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTI 424
+E+A S L+ Q +V+G +Q+ AI+VP+ + V A + V AD +EL ++ +
Sbjct: 524 IEDAFAASPLVEQAMVVGDEQKFVSAIVVPNFDGVRRWAHNEDVDVPADDAELCRDDRV 582
>gi|397689621|ref|YP_006526875.1| long-chain-fatty-acid-CoA ligase [Melioribacter roseus P3M]
gi|395811113|gb|AFN73862.1| long-chain-fatty-acid-CoA ligase [Melioribacter roseus P3M]
Length = 636
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 122/434 (28%), Positives = 214/434 (49%), Gaps = 48/434 (11%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ +++ +D A YTSGTT +PKG++L+H+N + ++P L +LP H
Sbjct: 169 RMQSVKENDYANICYTSGTTADPKGIVLSHRNYTANVEQATSLLPIPEWYTTLLILPWDH 228
Query: 78 VYERACG-YFIFSRGIELM--------YTAVRNLKDDLQRYQPHYMISVPLVYETLYSGI 128
+ G Y + G + ++N+ +++ +P +++SVP + + I
Sbjct: 229 AFAHTAGIYTLMYNGASMAAVETGRTPLETLKNIPKNIKEIKPTFLLSVPALAKNFRKNI 288
Query: 129 QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 188
+K I + + +++++ Y A EG+ +++
Sbjct: 289 EKGIREKGKRIEQLFNSALKLAYNYNA-----EGWNRGNGKRK----------------- 326
Query: 189 AILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSL-PMHIDLFYEAIGVKVQVGYGLTES 247
+L PL+ L +K+++ KI+ G GGG+L + + F+ AIG+ + GYGLTE+
Sbjct: 327 -LLKPLYKLYDKILFSKIRENFGGRLEFFIGGGALLDIELQRFFYAIGIPMFQGYGLTEA 385
Query: 248 SPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNP 307
+P+I+A P + LGS G +++ E+KI D+ +E LPAG KG + VRG VM GY+KN
Sbjct: 386 APIISANVPAKHKLGSSGRIVDNLEVKICDSNGSE-LPAGQKGEIVVRGENVMVGYWKNE 444
Query: 308 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 367
AT + + +DGWL +GD+G++ G L + GR K ++ S GE P +
Sbjct: 445 KATAETI-KDGWLYSGDLGYLDED----------GFLYVLGRFKSLLIASDGEKYSPEGI 493
Query: 368 EEAALRSS-LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISL 426
EEA +S I Q+++ A+IVP+KE++ ++ H SE + I L
Sbjct: 494 EEALTENSKFIEQVMLYNNQSPYTIALIVPNKEQIKRFLDENNLSH--KSEEGQNAVIKL 551
Query: 427 LYGELRKWTSKCSF 440
+ E+ K+ F
Sbjct: 552 IDEEISKFKQGGQF 565
>gi|448566848|ref|ZP_21637103.1| acyl-CoA synthetase [Haloferax prahovense DSM 18310]
gi|445713437|gb|ELZ65214.1| acyl-CoA synthetase [Haloferax prahovense DSM 18310]
Length = 666
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/391 (32%), Positives = 187/391 (47%), Gaps = 58/391 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDK--------FLSMLP 74
+D+A+ +YTSGTTG PKGV LTH N + Y + GD LS LP
Sbjct: 207 EDLASLIYTSGTTGQPKGVQLTHWNFRSNVNESYRRFGPRPDKGDTPVIGPDSVALSFLP 266
Query: 75 PWHVYERACGYFIF--SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
HV+ER G+F+ + + L++D Q +P SVP VYE LY I+ Q
Sbjct: 267 LAHVFERMAGHFMMFAAGAAVAYAESPDTLREDFQLVRPTTGTSVPRVYEKLYDAIRAQA 326
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
S A +R+ A + + AY P YL L
Sbjct: 327 SESPAKKRIFEWA-VGVGQAY-------------HTTDAPGYL---------------LT 357
Query: 193 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
H LA++LV+ +++ A+G + +SGGGSL + Y A+G+ + GYGLTE+SPVI
Sbjct: 358 AKHRLADRLVFGQVREALGDNLDFFISGGGSLSAELCALYHAMGLPIYEGYGLTETSPVI 417
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYFKNPSA 309
+ P +G++G+P+ + E K+ + L G G + VRG V GY+ NP
Sbjct: 418 SVNPPEEPKIGTIGYPLRNVETKLDTTVVGDQLGDAGGEVGELLVRGPNVTAGYWNNPEE 477
Query: 310 TKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 365
T+ A ED W TGD+ + P G + RAK +VLSTG+NV P
Sbjct: 478 TEAAFVEDDEGERWFRTGDVVELRPD----------GYIAFRERAKQILVLSTGKNVAPG 527
Query: 366 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 396
+E+A S ++ Q +V+G ++ A+IVP
Sbjct: 528 PIEDAFASSPVVEQCMVLGDGRKFVSALIVP 558
>gi|238060302|ref|ZP_04605011.1| AMP-dependent synthetase and ligase [Micromonospora sp. ATCC 39149]
gi|237882113|gb|EEP70941.1| AMP-dependent synthetase and ligase [Micromonospora sp. ATCC 39149]
Length = 605
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 186/387 (48%), Gaps = 52/387 (13%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA---ENGDKFLSMLP 74
+ + +DDIAT +YTSGTTG PKG +LTH+N+ I + +P G L LP
Sbjct: 177 RRSAVQADDIATIIYTSGTTGRPKGCVLTHRNMYADIANAVPALPNLFLRPGASTLLFLP 236
Query: 75 PWHVYERACGYFIF-SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 133
H + R + +R T +NL +LQ ++P +++SVP V+E +Y+G +++
Sbjct: 237 LAHSFARLIQIGVVQARATMAHCTDTKNLVGELQAFRPTFVLSVPRVFEKVYNGARQKAE 296
Query: 134 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
R + ++++ K G L R Q
Sbjct: 297 ADGKGRIFDRAEQVAVAYSEALEKPGGPGLAL-RAQ------------------------ 331
Query: 194 LHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
H + ++LVY+K+++A+G + +SGG L + F+ IGV + GYGLTE+SP +
Sbjct: 332 -HAVFDRLVYRKLRAALGGRCRDAISGGAPLGARLGHFFRGIGVTICEGYGLTETSPAAS 390
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
P +G+VG P+ I+I D G + + G+ + QGY++N +AT +
Sbjct: 391 VNLPDATKIGTVGRPLPGVTIRIDD-----------DGEILISGNLIFQGYWRNETATAE 439
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
AL DGW TGD+G + G L + GR K+ IV + G+NV P LE+
Sbjct: 440 ALSPDGWFRTGDLGQL----------DTDGFLSITGRKKEIIVTAGGKNVAPAVLEDQVR 489
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKE 399
LI Q VVIG Q A++ D+E
Sbjct: 490 AHPLISQCVVIGDRQPFIAALVTIDEE 516
>gi|452963530|gb|EME68596.1| AMP-dependent synthetase and ligase [Magnetospirillum sp. SO-1]
Length = 608
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 135/384 (35%), Positives = 189/384 (49%), Gaps = 60/384 (15%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA---ENGDKFLSMLPPWHVYERA 82
D A +YTSGT G PKGVML+H +L D++ EN + FLS LP H YE
Sbjct: 182 DTACLIYTSGTGGVPKGVMLSHGAILCNCMGATDVLRELGLEN-EVFLSFLPLSHAYEHT 240
Query: 83 CG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
G +F S G E+ Y + L ++ P M +VP +YET+ + I K + S RR
Sbjct: 241 AGLHFPISIGAEIRYAEGIEMLAANMAEVSPTIMTAVPRLYETMRTRILKGLARVSPLRR 300
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+ A + + +R+ L AR+ +L E+
Sbjct: 301 RLFMAALDLGTRRLKGQRL---------------------GLIARLADLVL-------ER 332
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LV K+++ G KA VSGG LP + F+ A+GV++ GYG TE++PVIA RP N
Sbjct: 333 LVRDKVRARFGGRLKAFVSGGAPLPYEVGAFFVALGVRILQGYGQTEAAPVIAVNRPGHN 392
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
L +VG + E++I G + VRG VMQGY+++ AT QA+D +GW
Sbjct: 393 RLETVGPAMPGVELRIA-----------GDGEILVRGELVMQGYWRDAPATAQAIDSEGW 441
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
L+TGDIG + P G L + R KD IV S G+NV P +E + I Q
Sbjct: 442 LHTGDIGEVDPD----------GCLRITDRKKDIIVNSGGDNVAPQRIESFLTLEAEIAQ 491
Query: 380 IVVIGQDQRRPG--AIIVPDKEEV 401
+V G RRP A+IVPD++ V
Sbjct: 492 AMVYG--DRRPHLVALIVPDRDWV 513
>gi|159900246|ref|YP_001546493.1| AMP-dependent synthetase/ligase [Herpetosiphon aurantiacus DSM 785]
gi|159893285|gb|ABX06365.1| AMP-dependent synthetase and ligase [Herpetosiphon aurantiacus DSM
785]
Length = 594
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 140/444 (31%), Positives = 217/444 (48%), Gaps = 62/444 (13%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
+ I +D+AT VYTSGTTGNPKG ML H+ LL ++ ++ + + GD + LP H++
Sbjct: 174 QQIEPEDLATIVYTSGTTGNPKGAMLAHRALLGELTAIRTTMAMQAGDDDVLFLPAAHIF 233
Query: 80 ER---ACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 135
R CG G+ + +++ + +D+Q +P + SVP +YE ++S Q + S
Sbjct: 234 GRLQHMCG---VDNGLNTAIIESIKQVLEDVQAIKPTFFFSVPRMYEKIFSTAQARAEAS 290
Query: 136 SAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLH 195
+R+ A AL A R ++R + Q + + A +A
Sbjct: 291 PIRKRIFAWAL--------AIAR-----QMSRYKGQKAAVPAAFKLKYA----------- 326
Query: 196 LLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
LA++LV+KK+++ +G + + ++GG L + I F+ GV + G+GLTE+S + A
Sbjct: 327 -LADRLVFKKVRALLGGNIRYAITGGAPLDIEILEFFNGAGVLLLEGWGLTETSAAVTAN 385
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
RP LG+VG EIKI D G V VRG+ ++ GY+ NP T +AL
Sbjct: 386 RPDDYRLGTVGKVFPGNEIKIAD-----------DGEVLVRGNLILSGYYNNPQKTNEAL 434
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
DGW +TGDIG I G L + R KD ++ ++G+N+ P +E A S
Sbjct: 435 -IDGWFHTGDIGKI----------DADGFLSIVDRKKDLLITASGKNIAPQAVEAAFKNS 483
Query: 375 SLIRQIVVIGQDQRRPG--AIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELR 432
I Q V G RRP A+ D E V A R V DA+ K ++ + E++
Sbjct: 484 PYISQCAVFG--DRRPYLVALFTLDMEAVTAWANR-EHVPVDANLHKHPKLVAAIEHEVQ 540
Query: 433 KWTSKC-SF-QIGPIHVVDEPFTV 454
SF QI ++ E FT+
Sbjct: 541 TINPTLPSFEQIKAYEILPEDFTI 564
>gi|406910414|gb|EKD50442.1| hypothetical protein ACD_62C00542G0002 [uncultured bacterium]
Length = 595
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 190/400 (47%), Gaps = 46/400 (11%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 80
++ D A++VYTSGTTG PKG +LTH N + + + I P L LP H+
Sbjct: 171 SLNLDHDASFVYTSGTTGEPKGAILTHGNFVAEAKGALAICPIGEDFTGLLFLPLAHILG 230
Query: 81 RACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
R +F G Y ++ L D++ +PH+M+SVP ++E +++ + + S +
Sbjct: 231 RVTQFFHIHVGHTQCYAESIDRLIDNIATVKPHFMVSVPRIFEKIHARTLQNVENSPPLK 290
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + R ++I + +R+ KQP +C L + LA
Sbjct: 291 QHIFRWALKIGEQRS--QRLL--------TKQP------------LPVCMKLK--YFLAH 326
Query: 200 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
LV+KK+ +G + +SGG L + LF+ A G + GYGLTE++ ++ R
Sbjct: 327 HLVFKKLHDKMGGRIRFFISGGAPLSADLALFFHAFGFTILEGYGLTETTAGLSFNRSHF 386
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
G+VG PI E + G + VRG V +GYF NP AT++A+DE+G
Sbjct: 387 IKFGTVGQPI----------EDAVAVKIAGDGEICVRGKIVFKGYFNNPQATREAIDEEG 436
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
W +TGDIG G L + R KD IV + G+N+ P +E + I
Sbjct: 437 WFHTGDIGEF----------DTDGFLKITDRKKDIIVTAGGKNIAPQSIENHMITDPFIS 486
Query: 379 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 418
Q +V G ++ A++V D+++VL AK I A EL
Sbjct: 487 QFIVHGDKRKFLSALVVLDRDQVLRFAKEHDIPFASYEEL 526
>gi|220936214|ref|YP_002515113.1| AMP-dependent synthetase and ligase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219997524|gb|ACL74126.1| AMP-dependent synthetase and ligase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 605
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 140/437 (32%), Positives = 212/437 (48%), Gaps = 53/437 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
D++AT VYTSGTTG PKGVML+H+N+L + D FLS LP H ER G
Sbjct: 184 DELATIVYTSGTTGKPKGVMLSHRNILFNAHASSRCADLNEQDLFLSFLPLSHTLERTAG 243
Query: 85 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y++ G + Y +++ L DDL +P +ISVP +YE +Y I + S ++
Sbjct: 244 YYMPMMVGAAVAYARSIQTLADDLATVRPTVLISVPRIYERVYGRINAGLKEKS----LL 299
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
AR L ++ ++R +Q + W + L+A K++
Sbjct: 300 ARKLF-MTTVDVGWRR------FEHSQGRAG---------WHPKLLLWPLLEKLVASKVL 343
Query: 203 YKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
+ G + V GG LP I F+ +G+ V GYG+TESSPV++ RP NV
Sbjct: 344 AR----LGGRLRYAVCGGAPLPPPIARFFIGLGLPVFHGYGMTESSPVVSVNRPDDNVPA 399
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G P+ E+KI G K + R VM GY+ N AT+ +D +GWL++
Sbjct: 400 SIGKPLPGVEVKI-----------GDKDELLTRSPSVMLGYWNNEEATRATIDSEGWLHS 448
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD + R G L + GR K+ IVL GE V P ++E A L Q++V
Sbjct: 449 GD---------KARMDETGH-LYITGRIKEIIVLGNGEKVPPADMEMAIALDPLFDQVMV 498
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---EKTI-SLLYGELRKWTSKC 438
IG+ + AI+V + EE AK L + ++L+ EKT+ + + +L ++
Sbjct: 499 IGEGRPALAAIVVLNPEEWAALAKELDLDPESEADLNGRFLEKTLRTRIARQLHEFPGYA 558
Query: 439 SFQIGPIHVVDEPFTVN 455
Q+ + V EP+TV+
Sbjct: 559 --QVRKLIVTLEPWTVD 573
>gi|28897125|ref|NP_796730.1| long-chain-fatty-acid-CoA ligase [Vibrio parahaemolyticus RIMD
2210633]
gi|260361698|ref|ZP_05774725.1| putative AMP-binding enzyme [Vibrio parahaemolyticus K5030]
gi|260878037|ref|ZP_05890392.1| long-chain-fatty-acid--CoA ligase family protein [Vibrio
parahaemolyticus AN-5034]
gi|260896932|ref|ZP_05905428.1| long-chain-fatty-acid--CoA ligase family protein [Vibrio
parahaemolyticus Peru-466]
gi|260903404|ref|ZP_05911799.1| putative AMP-binding enzyme [Vibrio parahaemolyticus AQ4037]
gi|28805334|dbj|BAC58614.1| putative long-chain-fatty-acid-CoA ligase [Vibrio parahaemolyticus
RIMD 2210633]
gi|308088769|gb|EFO38464.1| long-chain-fatty-acid--CoA ligase family protein [Vibrio
parahaemolyticus Peru-466]
gi|308089896|gb|EFO39591.1| long-chain-fatty-acid--CoA ligase family protein [Vibrio
parahaemolyticus AN-5034]
gi|308109048|gb|EFO46588.1| putative AMP-binding enzyme [Vibrio parahaemolyticus AQ4037]
gi|308115498|gb|EFO53038.1| putative AMP-binding enzyme [Vibrio parahaemolyticus K5030]
Length = 602
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 131/437 (29%), Positives = 206/437 (47%), Gaps = 55/437 (12%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ E DD+ T +YTSGTTG PKGVML + N+ Q+ + D L LP H
Sbjct: 171 RLEQAKVDDLLTLIYTSGTTGQPKGVMLDYGNIAAQLEGHDQRLSLSQDDVSLCFLPLSH 230
Query: 78 VYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ERA +++ +G Y ++D L +P M +VP YE ++S I +++ +
Sbjct: 231 VFERAWTFYVLYKGATNCYLQDTMQVRDALSEVRPTVMCAVPRFYEKIFSAIHEKVSRAP 290
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
R+++ F + C + +++PS + L H
Sbjct: 291 IHRKIM--------FTWAVNMGAKMALC-HQEKRKPSMM---------------LRKAHA 326
Query: 197 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ I+
Sbjct: 327 LADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATISCWD 386
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
C S+G + ++KI E NE+L VRG VM+GY+K P T++ D
Sbjct: 387 DKCFDPDSIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETEKTFD 435
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
E G+L TGD G I + G L + R K+ + S G+ + P +E A +
Sbjct: 436 EHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQMIEGAIGKDH 485
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLL 427
I QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 486 FIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIAYHDRVELIKHHQVVEMLEKRVNEL 545
Query: 428 YGELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 546 QKELAKFEQVKKFKLLP 562
>gi|433656674|ref|YP_007274053.1| Long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus BB22OP]
gi|432507362|gb|AGB08879.1| Long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus BB22OP]
Length = 602
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 131/437 (29%), Positives = 206/437 (47%), Gaps = 55/437 (12%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ E DD+ T +YTSGTTG PKGVML + N+ Q+ + D L LP H
Sbjct: 171 RLEQAKVDDLLTLIYTSGTTGQPKGVMLDYGNIAAQLEGHDQRLSLSQDDVSLCFLPLSH 230
Query: 78 VYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ERA +++ +G Y ++D L +P M +VP YE ++S I +++ +
Sbjct: 231 VFERAWTFYVLYKGATNCYLQDTMQVRDALSEVRPTVMCAVPRFYEKIFSAIHEKVSRAP 290
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
R+++ F + C + +++PS + L H
Sbjct: 291 IHRKIM--------FTWAVNMGAKMALC-HQEKRKPSMM---------------LRKAHA 326
Query: 197 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ I+
Sbjct: 327 LADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATISCWD 386
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
C S+G + ++KI E NE+L VRG VM+GY+K P T++ D
Sbjct: 387 DKCFDPDSIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETEKTFD 435
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
E G+L TGD G I + G L + R K+ + S G+ + P +E A +
Sbjct: 436 EHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQMIEGAIGKDH 485
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLL 427
I QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 486 FIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIAYHDRVELIKHHQVVEMLEKRVNEL 545
Query: 428 YGELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 546 QKELAKFEQVKKFKLLP 562
>gi|153839176|ref|ZP_01991843.1| AMP-binding family protein [Vibrio parahaemolyticus AQ3810]
gi|149747314|gb|EDM58294.1| AMP-binding family protein [Vibrio parahaemolyticus AQ3810]
Length = 602
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 131/437 (29%), Positives = 206/437 (47%), Gaps = 55/437 (12%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ E DD+ T +YTSGTTG PKGVML + N+ Q+ + D L LP H
Sbjct: 171 RLEQAKVDDLLTLIYTSGTTGQPKGVMLDYGNIAAQLEGHDQRLSLSQDDVSLCFLPLSH 230
Query: 78 VYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ERA +++ +G Y ++D L +P M +VP YE ++S I +++ +
Sbjct: 231 VFERAWTFYVLYKGATNCYLQDTMQVRDALSEVRPTVMCAVPRFYEKIFSAIHEKVSRAP 290
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
R+++ F + C + +++PS + L H
Sbjct: 291 IHRKIM--------FTWAVNMGAKMALC-HQEKRKPSMM---------------LRKAHA 326
Query: 197 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ I+
Sbjct: 327 LADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATISCWD 386
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
C S+G + ++KI E NE+L VRG VM+GY+K P T++ D
Sbjct: 387 DKCFDPDSIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETEKTFD 435
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
E G+L TGD G I + G L + R K+ + S G+ + P +E A +
Sbjct: 436 EHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQMIEGAIGKDH 485
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLL 427
I QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 486 FIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIAYHDRVELIKHHQVVEMLEKRVNEL 545
Query: 428 YGELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 546 QKELAKFEQVKKFKLLP 562
>gi|348171460|ref|ZP_08878354.1| putative long-chain fatty acid ligase [Saccharopolyspora spinosa
NRRL 18395]
Length = 592
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/390 (32%), Positives = 199/390 (51%), Gaps = 53/390 (13%)
Query: 16 HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP--AENGDKFLSML 73
H + + ++D+AT +YTSGTTG PKG +LTH+N+L ++R+ + P G+ L L
Sbjct: 165 HLRRRAVRAEDVATLIYTSGTTGRPKGCVLTHRNMLAEVRADIEAFPQLTRPGNSMLMFL 224
Query: 74 PPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
P HV RA + L +T+ V++L DL ++P ++++VP V+E +Y+ +++
Sbjct: 225 PMAHVLARAITVMCVYGRVTLGHTSDVKDLVTDLSSFRPTFVLAVPRVFEKVYNTAKQKA 284
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
S R + I+ AY+ + + +G + L
Sbjct: 285 HGSGKGR--IFDLAEDIAVAYS--RAVDDGG-----------------------VGLGLK 317
Query: 193 PLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
H L +KLVY K+++A+G A VSGG L + F+ +GV V GYGLTE++
Sbjct: 318 LKHTLFDKLVYGKLRAALGGRCIAAVSGGAPLGERLAHFFRGVGVPVLEGYGLTETTAAA 377
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 311
A + +G+VG P+ T ++I AE EVL ++G V + Y+ NP ATK
Sbjct: 378 AVNVESAFKVGTVGKPVAGTSVRI--AEDGEVL---------IKGDVVFREYWNNPLATK 426
Query: 312 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 371
++L EDGW +TGD+G + G L + GR K+ IV + G+NV P LE+A
Sbjct: 427 ESL-EDGWFHTGDLGSLDDE----------GFLKITGRKKEIIVTAGGKNVAPAVLEDAL 475
Query: 372 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 401
LI Q +V+G + GA+I D E V
Sbjct: 476 RAHPLISQCMVVGDQKPFIGALITLDPEFV 505
>gi|303256261|ref|ZP_07342277.1| AMP-dependent synthetase and ligase [Burkholderiales bacterium
1_1_47]
gi|330998956|ref|ZP_08322681.1| AMP-binding enzyme [Parasutterella excrementihominis YIT 11859]
gi|302860990|gb|EFL84065.1| AMP-dependent synthetase and ligase [Burkholderiales bacterium
1_1_47]
gi|329575698|gb|EGG57224.1| AMP-binding enzyme [Parasutterella excrementihominis YIT 11859]
Length = 616
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/364 (31%), Positives = 181/364 (49%), Gaps = 44/364 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+A VYTSGTTG PKGVMLTHKN+ +RS V E GD FLS LP H++ER G
Sbjct: 187 DDLACIVYTSGTTGRPKGVMLTHKNITSNVRSTLAHVKPEIGDIFLSFLPLSHMFERTAG 246
Query: 85 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y++ + G +++ +++ L +D + +P+ +ISVP VYE +Y+ + +
Sbjct: 247 YYLALATGSTIVFNRSLQYLAEDFKIAKPNVLISVPRVYERIYAKLNDAL---------A 297
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
+ I+ + + A ++ FC + K + L ++ K +
Sbjct: 298 KKGKIQAALFHMAVNAGWQNFCKKNSIKTAGSQGLMFGGL-----------VNATVGKKI 346
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
+K++S G + +SGG SL + +G+ V GYG+TE+SP+I+ T N
Sbjct: 347 SEKLKSQFGGRLRVAISGGASLNPEAAKVFCGLGLPVIQGYGMTETSPIISGNNVTDNDP 406
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
+VG + I++ G + ++++G VM+GY+ TK A EDGWL
Sbjct: 407 ATVGRALKDVSIRL-----------GEREEIQIKGDLVMKGYWDREKDTKNAFTEDGWLK 455
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD G + GR L + GR K+ IV STGE + P+++E A L RQ
Sbjct: 456 TGDQG---AYDGEGR-------LKIVGRIKEIIVTSTGEKISPVDIESALETIPLFRQTY 505
Query: 382 VIGQ 385
+G
Sbjct: 506 AVGD 509
>gi|262382159|ref|ZP_06075297.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262297336|gb|EEY85266.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 633
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/429 (28%), Positives = 214/429 (49%), Gaps = 54/429 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
+++G+DD AT YTSGTT +PKGV+LTH+N + V ++ + L +LP H +
Sbjct: 173 QSLGNDDYATITYTSGTTADPKGVILTHRNYTANVEQALTCVDIDDTWRTLVILPLDHCF 232
Query: 80 ERACGYFIF-SRG-----IELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQK 130
G++IF S+G +++ T + LK+ +++ ++P+ ++SVP + + I++
Sbjct: 233 AHVVGFYIFMSKGASVATVQVGRTGMETLKNIPINIKEFKPYLILSVPALAKNFKKNIEQ 292
Query: 131 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 190
I + +RI + Y EG + +
Sbjct: 293 GIRARGKNAVRLFNLALRIGYIYNGDSDEEEG----------------------KGFRVL 330
Query: 191 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
L PL L +KL++ K++ G K + GG L + FY A+G+ + GYGL+E++P
Sbjct: 331 LKPLVRLFDKLLFAKVRENFGGELKFFIGGGALLDKDLQKFYYALGIPMYQGYGLSEATP 390
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
+I+ P + GS G + ++KI D + N VLP G KG + +RG VM GY+KNP++
Sbjct: 391 IISTNGPRRHTFGSSGVLVRPLDLKICDMDGN-VLPPGEKGEIVIRGENVMAGYWKNPAS 449
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T + E GWL TGD+G++ G+L + GR K ++ S GE P +EE
Sbjct: 450 TADTVKE-GWLYTGDMGYMR-----------DGLLYVLGRFKSLLIGSDGEKYSPEGIEE 497
Query: 370 AALR-SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD---ASELSKEKTIS 425
A + SS I Q+++ A++VP KE + R + H + S+ +E+ I
Sbjct: 498 ALVEHSSCIDQLILYNNQSPYTTALLVPSKERL-----RKHLAHQNLDLTSDQGREEAIR 552
Query: 426 LLYGELRKW 434
++ ++ ++
Sbjct: 553 IIQRQIDRF 561
>gi|448409765|ref|ZP_21574892.1| long-chain fatty-acid-CoA ligase [Halosimplex carlsbadense 2-9-1]
gi|445672536|gb|ELZ25108.1| long-chain fatty-acid-CoA ligase [Halosimplex carlsbadense 2-9-1]
Length = 663
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 131/423 (30%), Positives = 208/423 (49%), Gaps = 56/423 (13%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNL---LHQIRSLYDIVPA-------ENGDKFLSMLP 74
DD+A+ +YTSGTTG PKGV LTH+N ++Q R P ++ + +S LP
Sbjct: 216 DDLASIIYTSGTTGQPKGVRLTHRNFRSNVNQCRKRMGPRPDKGETPVLDDHSRTISFLP 275
Query: 75 PWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
HV+ER G+F+ F+ G + Y + L +DLQ P SVP VYE ++ +++Q
Sbjct: 276 LAHVFERLAGHFLMFASGATVGYAESPDTLPEDLQLLSPTTGASVPRVYERIFDNMREQA 335
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
S+A R+ A+ + R D+ A A+L
Sbjct: 336 SDSAAKERIFEWAV-----------------GVAR------------DYARAEDPGAVLG 366
Query: 193 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
LA++LVY ++ +G + VSGGGSL + + +G+ + GYGLTE++PV+
Sbjct: 367 AKRSLADRLVYSTVKERMGGEIEFLVSGGGSLSQELAEMFLGMGIPIVEGYGLTETAPVL 426
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAET-NEVLP--AGSKGIVKVRGSQVMQGYFKNPS 308
+ P G++G P+ + ++ ++ ++ P AG G ++V G V GY+ P+
Sbjct: 427 SVNPPEAIRPGTMGPPVTDVDARVDESAVGDDQFPTAAGPVGELEVAGPNVTDGYWNMPA 486
Query: 309 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 368
T EDG+ TGDI I P G L + R K IVLSTG+NV P +E
Sbjct: 487 ETDATFTEDGYFVTGDIVEITPE----------GFLRYKDRLKQLIVLSTGKNVAPEPIE 536
Query: 369 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTISLL 427
+ S + Q++V+G +++ GA++VP+ E V A R I + AD + ++ +
Sbjct: 537 DRFATSDRVDQVMVVGDERKFVGAVVVPNFEAVRRWADREGIDLPADDEAVCADERVREW 596
Query: 428 YGE 430
GE
Sbjct: 597 VGE 599
>gi|386315854|ref|YP_006012019.1| AMP-dependent synthetase and ligase [Shewanella putrefaciens 200]
gi|319428479|gb|ADV56553.1| AMP-dependent synthetase and ligase [Shewanella putrefaciens 200]
Length = 598
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/408 (31%), Positives = 201/408 (49%), Gaps = 58/408 (14%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ E DD+ T +YTSGTTG+PKGVML ++N+ IR + +GD L+ LP H
Sbjct: 173 RLEAANLDDLLTLIYTSGTTGDPKGVMLDYRNMASTIRQHDQKLAFSSGDVSLAFLPLSH 232
Query: 78 VYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ER+ +++ RG +Y + +K+ + +PH + VP E +YS +Q ++ S
Sbjct: 233 VFERSWSFYVLCRGGHNVYLQNTQRVKEAISAVRPHTLCVVPRFLEKVYSAVQDKVAKSP 292
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
+R+ + +R+ +R +E Q++ + WL ++ W
Sbjct: 293 ESRKKMFAWAMRVG------ERQFEA-----GQRRAKGSL----WL------SLQWQ--- 328
Query: 197 LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LA KLVY K+Q+ +G K GG +L +++ F+ AIG+ V GYG+TE++ +
Sbjct: 329 LANKLVYSKLQAVLGGRLKFMPCGGAALDLNVGSFFHAIGIPVLCGYGMTETNATV---- 384
Query: 256 PTCNVL-----GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSAT 310
TCN L GS G P+ TEIK+ + +E+L VRG+ VM+GY+ P T
Sbjct: 385 -TCNTLDNRVPGSNGQPLLETEIKL--GKDDEIL---------VRGATVMRGYYNRPEDT 432
Query: 311 KQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA 370
A EDGWL TGD G + G L + R K+ + S G+ + P +E
Sbjct: 433 AAAF-EDGWLKTGDAGRFDAN----------GNLFITDRIKELMKTSNGKYIAPQRVEGT 481
Query: 371 ALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 418
R I Q+ +I + A+IVP E + AK + + + EL
Sbjct: 482 VGRCPFIEQVAIIADARNYVTALIVPAFESLEAWAKEKGLKYESSLEL 529
>gi|379710628|ref|YP_005265833.1| long-chain-fatty-acid--CoA ligase [Nocardia cyriacigeorgica GUH-2]
gi|374848127|emb|CCF65199.1| Long-chain-fatty-acid--CoA ligase [Nocardia cyriacigeorgica GUH-2]
Length = 598
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 130/390 (33%), Positives = 190/390 (48%), Gaps = 57/390 (14%)
Query: 16 HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS----LYDIVPAENGDKFLS 71
H + +G+ AT +YTSGTTG PKGVMLTH NL + +S L + G K L
Sbjct: 172 HERRAQVGASSPATLIYTSGTTGRPKGVMLTHANLWAESKSDRIALGKFIV--EGKKTLL 229
Query: 72 MLPPWHVYERACGYFIFSRGIELMYTAV-RNLKDDLQRYQPHYMISVPLVYETLYSGIQK 130
LP HV+ RA F + + +T+ L D ++PH+++SVP V+E +++ ++
Sbjct: 230 FLPLAHVFARAVALAAFDAKVIVAHTSDWTTLVDQFAEFKPHFILSVPRVFEKVFNSAKQ 289
Query: 131 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 190
+ + A I+++ EG K + LV I
Sbjct: 290 KAHDGGKGKIFDLAAETAIAYS--------EGL-----DKGGADLVTKIK---------- 326
Query: 191 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
H + +KLVY K++ A+G +A VSGGG L + F+ +GV + GYGLTE++
Sbjct: 327 ----HFVFDKLVYSKLRVALGGQCEAAVSGGGPLGARLGHFFRGVGVTIFEGYGLTETTA 382
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
I P +GSVG PI KI AE E+L ++GS V GY+ N A
Sbjct: 383 AITVNTPEHIRVGSVGRPIEGHAAKI--AEDGELL---------LKGSVVFDGYWGNAEA 431
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T++A EDGW TGD+G I G + + GR K+ IV + G+NV P LE+
Sbjct: 432 TEEAF-EDGWFKTGDLGAI----------DADGFVTITGRKKEIIVTAGGKNVSPALLED 480
Query: 370 AALRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
+ LI Q++V+G Q GA+I D E
Sbjct: 481 SLRAHPLISQVMVVGDGQPFVGALITLDPE 510
>gi|120600799|ref|YP_965373.1| AMP-dependent synthetase and ligase [Shewanella sp. W3-18-1]
gi|120560892|gb|ABM26819.1| AMP-dependent synthetase and ligase [Shewanella sp. W3-18-1]
Length = 598
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/408 (31%), Positives = 201/408 (49%), Gaps = 58/408 (14%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ E DD+ T +YTSGTTG+PKGVML ++N+ IR + +GD L+ LP H
Sbjct: 173 RLEAANLDDLLTLIYTSGTTGDPKGVMLDYRNMASTIRQHDQKLAFSSGDVSLAFLPLSH 232
Query: 78 VYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ER+ +++ RG +Y + +K+ + +PH + VP E +YS +Q ++ S
Sbjct: 233 VFERSWSFYVLCRGGHNVYLQNTQRVKEAISAVRPHTLCVVPRFLEKVYSAVQDKVAKSP 292
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
+R+ + +R+ +R +E Q++ + WL ++ W
Sbjct: 293 ESRKKMFAWAMRVG------ERQFEA-----GQRRAKGSL----WL------SLQWQ--- 328
Query: 197 LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LA KLVY K+Q+ +G K GG +L +++ F+ AIG+ V GYG+TE++ +
Sbjct: 329 LANKLVYSKLQAVLGGRLKFMPCGGAALDLNVGSFFHAIGIPVLCGYGMTETNATV---- 384
Query: 256 PTCNVL-----GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSAT 310
TCN L GS G P+ TEIK+ + +E+L VRG+ VM+GY+ P T
Sbjct: 385 -TCNTLDNRVPGSNGQPLLETEIKL--GKDDEIL---------VRGATVMRGYYNRPEDT 432
Query: 311 KQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA 370
A EDGWL TGD G + G L + R K+ + S G+ + P +E
Sbjct: 433 AAAF-EDGWLKTGDAGRFDAN----------GNLFITDRIKELMKTSNGKYIAPQRVEGT 481
Query: 371 ALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 418
R I Q+ +I + A+IVP E + AK + + + EL
Sbjct: 482 VGRCPFIEQVAIIADARNYVTALIVPAFESLEAWAKEKGLKYESSLEL 529
>gi|299531038|ref|ZP_07044451.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni S44]
gi|298720995|gb|EFI61939.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni S44]
Length = 649
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 131/434 (30%), Positives = 214/434 (49%), Gaps = 43/434 (9%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
++A VYTSGTTG PKGVMLTH N++ + ++ V A D FLS LP H +ER GY
Sbjct: 216 ELAGIVYTSGTTGKPKGVMLTHDNVVSDLHAVMQRVKAFPEDVFLSFLPLSHTFERTAGY 275
Query: 86 FI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
++ + G + Y +V L D+++ +P +ISVP +YE +Y+ +Q+ + +S ++
Sbjct: 276 YLAVATGSCVAYARSVAQLAQDMKQVKPTVLISVPRIYERVYAKVQESLASSPFKHKLFD 335
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
A+ + ++ A + + G + + + S+ AL WL +++ L L +L
Sbjct: 336 AAVNKGWKSFCAHQGMPLG---EQPEAKASWASALPGWLLRKLVAQPL--LAQFGGRL-- 388
Query: 204 KKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
+ VSGG L I + +G+ + GYG+TE++PV++A N +
Sbjct: 389 ----------RVAVSGGAPLSPTIARTFLGLGLPMVQGYGMTETAPVVSANGLDDNWPDT 438
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
VGH + E++I D + ++V G VM+GY+ P T +A DGWL TG
Sbjct: 439 VGHVLPGIEVRIGDDQE-----------LQVSGPVVMRGYWNRPEDTAKAFTADGWLRTG 487
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D I GR R ++GR K+ IV STGE V P ++E+A L L Q+ V+
Sbjct: 488 DQASI----ENGRIR-------IKGRIKEIIVTSTGEKVPPNDVEQAILVDPLFEQVFVV 536
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIG 443
G+D+ I V + E M A+ + + D S L + + T +
Sbjct: 537 GEDRPFIACIAVVGQVEWEMLARSVGLNPNDGSSLQHAAAEREALARIERQTRSFARYAV 596
Query: 444 P--IHVVDEPFTVN 455
P IH+V + + ++
Sbjct: 597 PRAIHLVRDSWNID 610
>gi|313125292|ref|YP_004035556.1| amp-forming long-chain acyl-CoA synthetase [Halogeometricum
borinquense DSM 11551]
gi|448287112|ref|ZP_21478328.1| amp-forming long-chain acyl-CoA synthetase [Halogeometricum
borinquense DSM 11551]
gi|312291657|gb|ADQ66117.1| AMP-forming long-chain acyl-CoA synthetase [Halogeometricum
borinquense DSM 11551]
gi|445572858|gb|ELY27388.1| amp-forming long-chain acyl-CoA synthetase [Halogeometricum
borinquense DSM 11551]
Length = 677
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 129/412 (31%), Positives = 190/412 (46%), Gaps = 70/412 (16%)
Query: 27 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY----------DIVPAENGDKFLSMLPPW 76
+A+ +YTSGTTG PKGV LTH N + Y D+ NG LS LP
Sbjct: 216 LASLIYTSGTTGQPKGVKLTHNNFRSNVNQCYKRFGPRPDKEDVPTLTNGMVTLSFLPLA 275
Query: 77 HVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 134
HV ER G+F+ F+ G + Y + L++D Q +P SVP VYE LY I+ +
Sbjct: 276 HVLERLAGHFLMFASGACVAYAESPDTLREDFQLVRPTVGTSVPRVYEKLYDAIRSEASK 335
Query: 135 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 194
S +R+ +A + +E P IL
Sbjct: 336 SPTKKRI-------FEWAVDVGREYHE-------SDSPG---------------VILSAK 366
Query: 195 HLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 253
H LA+KLV+ +++ A+G + +SGGGSL + Y +G+ + GYGLTE+SPVIA
Sbjct: 367 HALADKLVFDQVREALGGRIEFFISGGGSLSAELCALYHGMGLPILEGYGLTETSPVIAV 426
Query: 254 RRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYFKNPSATK 311
P +G++G P+ E+K+ +V G G + V+G V +GY+ P T
Sbjct: 427 NPPEEPKIGTIGTPVVDVEVKLDKTVVGDVTGDAGGDVGELLVKGPNVTEGYWNRPEETA 486
Query: 312 QALDED----------------GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIV 355
A +D GW TGD+ + P G + RAK +V
Sbjct: 487 AAFTDDVPSDANGESESEGDSGGWFRTGDVVELRPD----------GYIAFRERAKQILV 536
Query: 356 LSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 407
LSTG+NV P +E++ S ++ Q +V+G ++ A+IVP EE+ A R
Sbjct: 537 LSTGKNVAPGPIEDSFASSDVVEQCMVLGDGRKFVSALIVPSFEEIREWADR 588
>gi|284163671|ref|YP_003401950.1| AMP-dependent synthetase and ligase [Haloterrigena turkmenica DSM
5511]
gi|284013326|gb|ADB59277.1| AMP-dependent synthetase and ligase [Haloterrigena turkmenica DSM
5511]
Length = 652
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 135/422 (31%), Positives = 205/422 (48%), Gaps = 62/422 (14%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL---LHQIRSLY-------DIVPAENGD 67
+ + + DD+A+ +YTSGTTG PKGV LTH N ++ IR + D VP + +
Sbjct: 199 RLDAVELDDLASLIYTSGTTGQPKGVQLTHWNFRSNVNAIRKRFARRPDRDDDVPTLDEE 258
Query: 68 KF-LSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETL 124
+S LP HV+ER G+F+ F+ G + Y + L++D P SVP VYE +
Sbjct: 259 SLAMSYLPLAHVFERTAGHFVLFASGSCIAYAESPDTLQEDFSAVGPTTATSVPRVYEKI 318
Query: 125 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 184
Y GI++Q S A R++ A + AY + P
Sbjct: 319 YDGIREQASESGAKRKIFEWA-TDVGVAY-------------QRADSPG----------- 353
Query: 185 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 243
IL LA+KLV+ ++ A+G +SGGGSL + Y A+G+ + GYG
Sbjct: 354 ----PILRAKQALADKLVFSTVREALGGEIDLLISGGGSLSPELCQLYHAMGLPIFEGYG 409
Query: 244 LTESSPVIAARRPTCNVLGSVGHPINHTEIK----IVDAETNEVLPAGSKGIVKVRGSQV 299
LTE++PV++ P +G++G +++ +++ + D E + P G G + V G V
Sbjct: 410 LTETAPVVSTNPPDATKIGTIGPALSNVDLRVDETVADQEAFDGDP-GEVGELLVAGPNV 468
Query: 300 MQGYFKNPSATKQAL--DEDG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIV 355
+GY+ P AT+ A D+DG W TGDI + P G L R K IV
Sbjct: 469 TEGYWNKPGATQGAFTEDDDGERWFRTGDIVHLRPD----------GYLEFRDRLKQLIV 518
Query: 356 LSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADA 415
LSTG+NV P +E+A S ++ Q +V+G ++ GA++VP+ V A I D
Sbjct: 519 LSTGKNVAPGPIEDAFAASEVVEQAMVVGDGEKFIGALLVPNTAHVREWADEEGIDLPDD 578
Query: 416 SE 417
E
Sbjct: 579 PE 580
>gi|262404795|ref|ZP_06081350.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. RC586]
gi|262349827|gb|EEY98965.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. RC586]
Length = 601
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 135/435 (31%), Positives = 208/435 (47%), Gaps = 55/435 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+
Sbjct: 173 EQANFDDLFTLIYTSGTTGTPKGVMLDYRNIGSQLEGHDQRLNLNEEDVSLCFLPLSHVF 232
Query: 80 ERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ERA ++ +G Y V +++D L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYKGATNCYLHDVAHVRDALGEVRPTVMCAVPRFYEKIFSAIHEKVAKAPFI 292
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
R+V+ F + C + Q QPS+L+A H LA
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQHQPSWLLA---------------QSHQLA 328
Query: 199 EKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ I+
Sbjct: 329 DKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATISCWDDH 388
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
C S+G + ++KI E NE+L VRG VM+GY+K T ++ DE
Sbjct: 389 CFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLEKETSESFDEH 437
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
G+L TGD G I + G L + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 429
QI VI ++ A+IVP + + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCFDSLEVYAKELNIKYQDRLELLKHSQVLEMFEKRVNELQK 547
Query: 430 ELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFKLLP 562
>gi|365876500|ref|ZP_09416021.1| amp-dependent synthetase and ligase [Elizabethkingia anophelis Ag1]
gi|442586511|ref|ZP_21005339.1| Long-chain acyl-CoA synthetases (AMP-forming) [Elizabethkingia
anophelis R26]
gi|365755812|gb|EHM97730.1| amp-dependent synthetase and ligase [Elizabethkingia anophelis Ag1]
gi|442563735|gb|ELR80942.1| Long-chain acyl-CoA synthetases (AMP-forming) [Elizabethkingia
anophelis R26]
Length = 588
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 136/439 (30%), Positives = 209/439 (47%), Gaps = 68/439 (15%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGD----KFLSMLPPWH 77
I +DDIAT +YTSGTTG PKGV LTH+N++ + + +P D K LS LP H
Sbjct: 169 IKTDDIATLIYTSGTTGRPKGVALTHENIVSNVLNSNPRIPDVKLDYKEMKCLSFLPLCH 228
Query: 78 VYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ER Y G + + ++ + D+L+ +P +M VP + E +Y +I+ +
Sbjct: 229 VFERMLLYLYQHNGYSIYFAESIDKVGDNLKEVKPQFMTVVPRLVEKVYD----KIYNTG 284
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
A+ + + + + + E + L ++ + + W+
Sbjct: 285 ASAGGMKTKIFLWALS------LVEDYELGKS-------MGIKGWI-------------- 317
Query: 197 LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
A+KLV+ K + +G + A VSG +L ++ + G+ + GYGLTE+SPVIA
Sbjct: 318 -ADKLVFSKWREGLGGNIVALVSGSAALSPRLNRIFHGAGIPILEGYGLTETSPVIAVNS 376
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
G+VG PI + E+KI AE E+L V+G+ V +GY+ + TK+A
Sbjct: 377 FKHRKFGTVGWPIENAEVKI--AEDGEIL---------VKGTSVFKGYYMDEEKTKEAFT 425
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
EDG+ TGDIG+I G L + R K+ S G+ + P +E A S
Sbjct: 426 EDGYFKTGDIGFIDDE----------GFLKITDRKKEMFKTSGGKYIAPQVIENNAKASK 475
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL------SIVHADASELSKEK---TISL 426
I QI+VIG ++ P A I PD E V A+R S A+E K++ I
Sbjct: 476 FIEQIMVIGDGEKMPAAFIQPDFEFVKAWAERKGLNIGSSYAEIAANEDVKQRIAQEIEA 535
Query: 427 LYGELRKWTSKCSFQIGPI 445
L L KW F++ PI
Sbjct: 536 LNKHLGKWEQIKKFELTPI 554
>gi|379729826|ref|YP_005322022.1| putative long chain fatty-acid CoA ligase [Saprospira grandis str.
Lewin]
gi|378575437|gb|AFC24438.1| putative long chain fatty-acid CoA ligase [Saprospira grandis str.
Lewin]
Length = 607
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 211/436 (48%), Gaps = 45/436 (10%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
+ I ++D+AT +YTSGTTG PKGVML+H N+ +R + +P + D LS LP HV+
Sbjct: 175 DKIKAEDLATIIYTSGTTGKPKGVMLSHNNIATNVRDVLPFIPLQPQDIALSFLPLCHVF 234
Query: 80 ERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ER Y ++G ++ Y + L + LQ +PH+ +VP + E +Y + ++
Sbjct: 235 ERTVTYSYMAKGAQIFYAKDLDTLSETLQDVRPHFFTTVPRLLEKVYEKMMLKVQAEGGL 294
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
+ + + ++ Y DW A + AI W +A
Sbjct: 295 KEKIFNWALGLTEKYD------------------------FDWQ-AAGLEAIKWK---IA 326
Query: 199 EKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR--R 255
+KLV+ K++ +G G V+G + P + + A+GV ++ GYGLTE+SP I+
Sbjct: 327 DKLVFSKVRDRLGGRLKGIVTGAAACPPRMTQLFSAVGVPIREGYGLTETSPAISINIFE 386
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
P ++GSVG + ++KI ++ +G V V+G+ VM GY++ T + +
Sbjct: 387 PYQAMIGSVGPILPSVQVKIDQDDSY----GPGEGEVLVKGNSVMMGYYRKEDKTAEVFN 442
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
E+GW TGDIG I +++ L + R K+ + S G+ V P +E
Sbjct: 443 EEGWFLTGDIGKIV------ENKKGIKFLKITDRKKELLKTSGGKYVAPTPIESTLKEDL 496
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE-LSKEKTISLLYGELRKW 434
L+ Q++V+G+ ++ A+I P+ E + + +I E L+ K ++ + ++
Sbjct: 497 LVEQVMVVGEKRKFVSALIQPNFESLKNWCQDKNITWTKPEEVLANPKVLAYFQAVVNRY 556
Query: 435 TSKCSF--QIGPIHVV 448
+ S QI H+V
Sbjct: 557 NPRFSKVEQIKKFHLV 572
>gi|373958206|ref|ZP_09618166.1| AMP-dependent synthetase and ligase [Mucilaginibacter paludis DSM
18603]
gi|373894806|gb|EHQ30703.1| AMP-dependent synthetase and ligase [Mucilaginibacter paludis DSM
18603]
Length = 637
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 195/395 (49%), Gaps = 50/395 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDK-FLSMLPPWHV 78
E I D++ +YTSGTTG PKGVMLTH NL+ +R D +P + D+ FLS LP HV
Sbjct: 185 EAIIPSDLSCLIYTSGTTGTPKGVMLTHSNLVENVRVCLDQIPVIDKDETFLSFLPLSHV 244
Query: 79 YERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
+ER Y + ++G ++ + ++ L ++ +P M VP + E ++ K ++
Sbjct: 245 FERTATYHVCLAKGCKIAFAQSLDLLAKNMGEVKPTVMNCVPRLLERIHDKAMKNGTSAG 304
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
+ + + I Y + K+P + IL H
Sbjct: 305 GTKTKIFLWALEIGKKYR---------LVQEAGKKPGF---------------ILQQQHK 340
Query: 197 LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
+A+KLV+ KI+ G K +SGGG+LP +I F+ +G+K+ G+GLTE+SPV++
Sbjct: 341 IADKLVFSKIKEKTGGRLKFMISGGGALPKNIGEFFGDLGIKILEGFGLTETSPVMSVTE 400
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVL---------PA--GSKGIVKVRGSQVMQGYF 304
V G+VG I E+ I + +T + PA +G + VRG VM+GY+
Sbjct: 401 YHRQVYGTVGRIIPGIEVAIQNVDTGYIYSIQTHESFNPAFQSEEGEIIVRGHCVMKGYW 460
Query: 305 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 364
P T A+D DGW +TGDIG R G L + R K+ +V + G+NV P
Sbjct: 461 NKPQETAVAIDVDGWFHTGDIG-----------RFFKGNLQITDRLKNMLVNAYGKNVYP 509
Query: 365 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
+E L+S I + ++G + AI++P +E
Sbjct: 510 TPVENTYLKSPKIEGLFLVGDKREYITAIVIPARE 544
>gi|429753318|ref|ZP_19286127.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 326 str. F0382]
gi|429173984|gb|EKY15489.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 326 str. F0382]
Length = 636
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 131/414 (31%), Positives = 212/414 (51%), Gaps = 49/414 (11%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQ-IRSLYDIVPAENGDKFLSMLPPWHVYERAC 83
DD+ T +YTSGTTG PKGVML+++NL Q I + +N D L+ LP HV+ERA
Sbjct: 217 DDLFTIIYTSGTTGEPKGVMLSYENLAFQMIGHTERLSTVDNTDSSLAFLPLSHVFERAW 276
Query: 84 GYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
+F + + + Y NL ++ L + +P M +VP YE +++ + + SS V
Sbjct: 277 TFFCLYKAVTVYYLDDTNLVREALAQVRPTLMCAVPRFYEKIFATVHDKADASS----FV 332
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
R L R++ A KR+ L K+PS IL + L +KLV
Sbjct: 333 KRKLFRLAIA--TGKRV---LALREQGKKPSL---------------ILQKAYNLFDKLV 372
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
YKK++ A+G K GG +L I F+++IG+ +++GYG+TE+ I+
Sbjct: 373 YKKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINLKLGYGMTETVATISCWGDNRINP 432
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
SVG + + +++I E NE+L V+G VM+GY+KNP T + DG+L
Sbjct: 433 QSVGEVMPNVQVRI--GEDNEIL---------VKGGMVMKGYYKNPEETAKVFTPDGYLR 481
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD G + +++ L + R K+ + S G+ + P +E + +LI QI
Sbjct: 482 TGDAGNLDGNNN----------LFITERLKELMKTSNGKYIAPQMIEGKVGKYNLIEQIA 531
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK-EKTISLLYGELRKW 434
VI ++ A+IVP+ E + A K L+I + + ++L K + I + +L+K+
Sbjct: 532 VIADGKKFVSALIVPNFEMLSQALKDLNIKYKNTADLIKHSQVIEYIGKQLQKF 585
>gi|379007028|ref|YP_005256479.1| long-chain-fatty-acid--CoA ligase [Sulfobacillus acidophilus DSM
10332]
gi|361053290|gb|AEW04807.1| Long-chain-fatty-acid--CoA ligase [Sulfobacillus acidophilus DSM
10332]
Length = 589
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 139/440 (31%), Positives = 209/440 (47%), Gaps = 60/440 (13%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI---VPA---ENGDKFLSMLPPWHVY 79
D+AT VYTSGTTG PKGVMLTH NLL I ++ + PA D LS LP H+
Sbjct: 157 DLATIVYTSGTTGLPKGVMLTHGNLLANIEAILALRATSPAFTVTREDVALSFLPLSHIL 216
Query: 80 ERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ER S+G+ + Y + + +L+ +P M++VP ++E LY+ I Q+ +
Sbjct: 217 ERMVHLLFLSQGVTIAYAESPERIPANLREIRPTVMVAVPRIFEKLYAAILDQMTRAGGV 276
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
+R + IR R YE F W W W A
Sbjct: 277 KRRLFDWAIRQGI------RRYERF-----------------WQWGGSRPVWGW-ADRWA 312
Query: 199 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
++LVY++I+ A+G + +SGG +L I F+ A+G+ V GYGLTE++PV+A P
Sbjct: 313 DRLVYRRIRQAVGGRLRFVISGGAALNPVIGQFFYAVGIPVIEGYGLTETAPVLAVNWPD 372
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
G+VG P+ +++ A E+L RG + GY+ P T++A +D
Sbjct: 373 RPRYGTVGRPLPEVTLQL--APDGEIL---------ARGPNITPGYWNRPEETQEAF-QD 420
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GW +TGD+G P G L + R K IVLSTG+NV P +E+ L S I
Sbjct: 421 GWFHTGDLGEWTPD----------GFLRVTDRKKYIIVLSTGKNVAPQAVEQKLLLSPWI 470
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 437
Q VV+G Q+ A++ + E+V A+ + H DA + + L + + +
Sbjct: 471 EQAVVLGNRQKYVAALLYLNPEKVQEWAR---LHHRDAPSYPELLQDAELSAFMMQEVER 527
Query: 438 CSFQIGPIHVVDEPFTVNFL 457
+ + P + P V FL
Sbjct: 528 VTADLAPF---ERPKKVAFL 544
>gi|77164343|ref|YP_342868.1| AMP-dependent synthetase and ligase [Nitrosococcus oceani ATCC
19707]
gi|254434511|ref|ZP_05048019.1| AMP-binding enzyme, putative [Nitrosococcus oceani AFC27]
gi|76882657|gb|ABA57338.1| AMP-dependent synthetase and ligase [Nitrosococcus oceani ATCC
19707]
gi|207090844|gb|EDZ68115.1| AMP-binding enzyme, putative [Nitrosococcus oceani AFC27]
Length = 601
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 136/404 (33%), Positives = 204/404 (50%), Gaps = 51/404 (12%)
Query: 10 PVIAGKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKF 69
P A KHY + D +AT VYTSGTTG PKGVML+H N+L S P D F
Sbjct: 169 PKTADKHYP-KLNNPDALATIVYTSGTTGLPKGVMLSHHNILWNAHSSLQSTPIYEDDLF 227
Query: 70 LSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSG 127
LS LP H ER GY++ G ++ YT ++ L +DL +P ++SVP ++E +++
Sbjct: 228 LSFLPLSHSLERTLGYYLPMMAGAQVAYTRSIAKLAEDLVTIKPTVLVSVPRIFERVHN- 286
Query: 128 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 187
QI+ + ++ RAL +++ A G+ +Q +Y W +
Sbjct: 287 ---QIYDKLREKTLLERALFKLAIA--------AGW------RQFNYQQGRAPW---HPL 326
Query: 188 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 246
C L+ L ++V +++ + G + V GG L ++ A+G+ + GYGLTE
Sbjct: 327 CL----LNPLLRQIVGRQVLAQFGGRLRIVVCGGAPLVFNVARELLALGLPLIQGYGLTE 382
Query: 247 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKN 306
+SPVI+ N SVG P+ EI+I E NE+L R VM GY+ N
Sbjct: 383 ASPVISGNSLNNNDPKSVGTPLQDVEIRI--GEHNELLG---------RSPGVMLGYWNN 431
Query: 307 PSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLE 366
P AT + +DE+GWL+TGD ++R G L + GR K+ IVL+TGE V P E
Sbjct: 432 PKATAEVIDEEGWLHTGD-----------QARIEQGRLYITGRIKEIIVLATGEKVPPGE 480
Query: 367 LEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 410
+E A L Q +V+G+ + A+IV + E A+ L++
Sbjct: 481 METAIGTDPLFDQAMVVGEGKPYLSALIVVNPEHWNTLAQELNL 524
>gi|339629861|ref|YP_004721504.1| AMP-dependent synthetase and ligase [Sulfobacillus acidophilus TPY]
gi|339287650|gb|AEJ41761.1| AMP-dependent synthetase and ligase [Sulfobacillus acidophilus TPY]
Length = 593
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 139/440 (31%), Positives = 209/440 (47%), Gaps = 60/440 (13%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI---VPA---ENGDKFLSMLPPWHVY 79
D+AT VYTSGTTG PKGVMLTH NLL I ++ + PA D LS LP H+
Sbjct: 161 DLATIVYTSGTTGLPKGVMLTHGNLLANIEAILALRATSPAFTVTREDVALSFLPLSHIL 220
Query: 80 ERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ER S+G+ + Y + + +L+ +P M++VP ++E LY+ I Q+ +
Sbjct: 221 ERMVHLLFLSQGVTIAYAESPERIPANLREIRPTVMVAVPRIFEKLYAAILDQMTRAGGV 280
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
+R + IR R YE F W W W A
Sbjct: 281 KRRLFDWAIRQGI------RRYERF-----------------WQWGGSRPVWGW-ADRWA 316
Query: 199 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
++LVY++I+ A+G + +SGG +L I F+ A+G+ V GYGLTE++PV+A P
Sbjct: 317 DRLVYRRIRQAVGGRLRFVISGGAALNPVIGQFFYAVGIPVIEGYGLTETAPVLAVNWPD 376
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
G+VG P+ +++ A E+L RG + GY+ P T++A +D
Sbjct: 377 RPRYGTVGRPLPEVTLQL--APDGEIL---------ARGPNITPGYWNRPEETQEAF-QD 424
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GW +TGD+G P G L + R K IVLSTG+NV P +E+ L S I
Sbjct: 425 GWFHTGDLGEWTPD----------GFLRVTDRKKYIIVLSTGKNVAPQAVEQKLLLSPWI 474
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 437
Q VV+G Q+ A++ + E+V A+ + H DA + + L + + +
Sbjct: 475 EQAVVLGNRQKYVAALLYLNPEKVQEWAR---LHHRDAPSYPELLQDAELSAFMMQEVER 531
Query: 438 CSFQIGPIHVVDEPFTVNFL 457
+ + P + P V FL
Sbjct: 532 VTADLAPF---ERPKKVAFL 548
>gi|404404087|ref|ZP_10995671.1| AMP-forming long-chain acyl-CoA synthetase [Alistipes sp. JC136]
Length = 635
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 139/459 (30%), Positives = 222/459 (48%), Gaps = 68/459 (14%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNL---LHQIRSLYDIVPAENGDKFLSMLPPW 76
+ I +DD AT YTSGTT +PKGV+LTH+N + Q S DI P + L +LP
Sbjct: 170 QAIQNDDYATITYTSGTTSDPKGVILTHRNYTANVEQALSRVDIPPHY---RTLIILPLD 226
Query: 77 HVYERACGYFIF----------SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 126
H + G++I G M T ++N+ +++ +PH+++SVP + +
Sbjct: 227 HCFAHVVGFYIMIACGASVATVQIGATPMET-LKNIPQNIREVKPHFLLSVPALAKNFRK 285
Query: 127 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 186
GI+ I + +R ++AY +G+ W RI
Sbjct: 286 GIESSIRAKGKFTEGLFHLALRTAYAYNR-----DGYSKGSG--------------W-RI 325
Query: 187 ICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 245
+ L P L + ++++K++ A G S K V GG L + FY AIG+ + GYGL+
Sbjct: 326 V---LKPFVALFDAVLFRKVREAFGGSLKFFVGGGALLDAELQRFYYAIGIPMFQGYGLS 382
Query: 246 ESSPVIAARRPTC--NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 303
E++PVI+ P + GS G + ++KI+D E EV P G KG + +RG VM GY
Sbjct: 383 EATPVISTNSPNYHWHRFGSSGKILIPLDLKILDEEGREV-PRGQKGEIVIRGENVMAGY 441
Query: 304 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 363
+KNP AT + DGWL+TGD+G+++ L + GR K ++ S GE
Sbjct: 442 WKNPDATADTV-RDGWLHTGDMGYVSEDD----------FLYVLGRFKSLLIASDGEKYS 490
Query: 364 PLELEEAAL-RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 422
P +EEA + +S I QI++ GAI+VP++E +L + I + + ++ E
Sbjct: 491 PEGMEEAIVDKSPYIDQIIIHNNQDPFTGAIVVPNREALLRELEARKIPEGEHAAVAAE- 549
Query: 423 TISLLYGELRKWTSKCSFQ--------IGPIHVVDEPFT 453
+L E+ ++ + F + +VDE FT
Sbjct: 550 ---ILGAEIDRYRAGGVFAGEFPERWLPAGLAIVDEAFT 585
>gi|37678678|ref|NP_933287.1| long-chain acyl-CoA synthetase [Vibrio vulnificus YJ016]
gi|37197418|dbj|BAC93258.1| long-chain acyl-CoA synthetase [Vibrio vulnificus YJ016]
Length = 616
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/437 (30%), Positives = 208/437 (47%), Gaps = 55/437 (12%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ E +D+ T +YTSGTTG PKGVML + N+ Q+ + D L LP H
Sbjct: 186 RLEQANFEDLLTLIYTSGTTGQPKGVMLDYSNIAAQLEGHDRRLSLTENDVSLCFLPLSH 245
Query: 78 VYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ERA +++ +G Y ++D L +P M +VP YE ++S I +++ +
Sbjct: 246 VFERAWTFYVLYKGGTNCYLQDTMQVRDALSDIKPTVMCAVPRFYEKIFSAIHEKVSRAP 305
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
R+++ + + + + EG +QPS + L H
Sbjct: 306 LMRKIMFTWAVNMGAKMSVCHQ--EG-------RQPSLM---------------LKKAHA 341
Query: 197 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LA+KLV K+++ +G + + GG L I F+ AIG+ V++GYG+TE++ I+
Sbjct: 342 LADKLVLSKLRALLGGNINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATISCWD 401
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
C S+G + ++KI E NE+L VRG VM+GY+K P T++ D
Sbjct: 402 DKCFNPDSIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLPEETEKTFD 450
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
E G+L TGD G I H G L + R K+ + S G+ + P +E A +
Sbjct: 451 EHGFLKTGDAGHIDEH----------GNLFITDRIKELMKTSGGKYIAPQMIEGAIGKDH 500
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLL 427
I QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 501 FIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRVELIKHHQVVEMLEKRVNDL 560
Query: 428 YGELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 561 QKELAKFEQVKKFKLLP 577
>gi|255692993|ref|ZP_05416668.1| putative long-chain-fatty-acid--CoA ligase [Bacteroides finegoldii
DSM 17565]
gi|260621305|gb|EEX44176.1| AMP-binding enzyme [Bacteroides finegoldii DSM 17565]
Length = 602
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 210/438 (47%), Gaps = 54/438 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHVYERAC 83
DD+A +YTSGTTG PKGVML H L Q R+ D + + D ++ LP HV+E+A
Sbjct: 180 DDLANILYTSGTTGEPKGVMLHHSCYLEQFRTHDDRLTTMSDKDVSMNFLPLTHVFEKAW 239
Query: 84 GYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y +G+++ + +++ ++ +P M SVP +E +Y+G+Q++I ++ ++ +
Sbjct: 240 CYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKINETTGMKKAL 299
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
IR+ +I+ L + + P ++ + + + EK +
Sbjct: 300 MLDAIRVG-------KIHNLDYLRKGKTPP-------------VMNQLKYKFY---EKTI 336
Query: 203 YKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
Y ++ IGI + G ++P I+ F ++G+ + VGYGLTES+ ++ P
Sbjct: 337 YSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVGYGLTESTATVSCTLPVGYD 396
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
+GSVG + E+KI E NE+L +RG + +GY+K AT A+D DGW
Sbjct: 397 IGSVGVVLPGVEVKI--GEDNEIL---------LRGKTITKGYYKKAEATAAAIDSDGWF 445
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
+TGD G+ G L L R KD S G+ + P LE + I QI
Sbjct: 446 HTGDAGYFK-----------NGQLFLTERIKDLFKTSNGKYIAPQALETKLVIDRYIDQI 494
Query: 381 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSF 440
+I ++ A+IVP V AK I + D SEL + I L+ R T + F
Sbjct: 495 AIIADQRKFVSALIVPVYGYVKEYAKEKGIEYKDMSELLQHPKIVGLF-RARIETLQQQF 553
Query: 441 ----QIGPIHVVDEPFTV 454
QI ++ EPF++
Sbjct: 554 AHYEQIKRFTLLPEPFSM 571
>gi|146291172|ref|YP_001181596.1| AMP-dependent synthetase and ligase [Shewanella putrefaciens CN-32]
gi|145562862|gb|ABP73797.1| AMP-dependent synthetase and ligase [Shewanella putrefaciens CN-32]
Length = 598
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/408 (31%), Positives = 202/408 (49%), Gaps = 58/408 (14%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ E DD+ T +YTSGTTG+PKGVML ++N+ IR + +GD L+ LP H
Sbjct: 173 RLEAANLDDLLTLIYTSGTTGDPKGVMLDYRNMASTIRQHDQKLAFSSGDVSLAFLPLSH 232
Query: 78 VYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ER+ +++ RG +Y + +K+ + +PH + VP E +YS +Q ++ S
Sbjct: 233 VFERSWSFYVLCRGGHNVYLQNTQRVKEAISAVRPHTLCVVPRFLEKVYSAVQDKVAKSP 292
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
+R+ + +R+ +R +E + + + + S WL ++ W
Sbjct: 293 ESRKKMFAWAMRVG------ERQFE---VGQRRAKGSL------WL------SLQWQ--- 328
Query: 197 LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LA KLVY K+Q+ +G K GG +L +++ F+ AIG+ V GYG+TE++ +
Sbjct: 329 LANKLVYSKLQAVLGGRLKFMPCGGAALDLNVGSFFHAIGIPVLCGYGMTETNATV---- 384
Query: 256 PTCNVL-----GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSAT 310
TCN L GS G P+ TEIK+ + +E+L VRG+ VM+GY+ P T
Sbjct: 385 -TCNTLDNRVPGSNGQPLLETEIKL--GKDDEIL---------VRGATVMRGYYNRPEDT 432
Query: 311 KQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA 370
A EDGWL TGD G + G L + R K+ + S G+ + P +E
Sbjct: 433 AAAF-EDGWLKTGDAGRFDAN----------GNLFITDRIKELMKTSNGKYIAPQRVEGT 481
Query: 371 ALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 418
R I Q+ +I + A+IVP E + AK + + + EL
Sbjct: 482 VGRCPFIEQVAIIADARNYVTALIVPAFESLEAWAKEKGLKYESSLEL 529
>gi|260771297|ref|ZP_05880224.1| long-chain-fatty-acid--CoA ligase [Vibrio furnissii CIP 102972]
gi|260613894|gb|EEX39086.1| long-chain-fatty-acid--CoA ligase [Vibrio furnissii CIP 102972]
Length = 604
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 134/437 (30%), Positives = 206/437 (47%), Gaps = 55/437 (12%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP H
Sbjct: 171 RLEQANDDDLFTLIYTSGTTGKPKGVMLDYRNVGAQLEGHDQRLNLSQDDVSLCFLPLSH 230
Query: 78 VYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ERA +++ +G Y V ++D L + +P M +VP YE ++S I +++ +
Sbjct: 231 VFERAWTFYVLYKGATNCYLQDVGQVRDALSQVRPTVMCAVPRFYEKIFSAIHEKVARAP 290
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
R+V+ F ++ C + ++ PS WA C H
Sbjct: 291 LHRKVM--------FTWSVNMGAKMARC-HQEKRTPS---------WALKQC------HQ 326
Query: 197 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LA+KLV K++ +G + GG L I F+ AIG+ V++GYG+TE++ I+
Sbjct: 327 LADKLVLSKLRGLLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATISCWD 386
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
C S+G + ++KI E NE+L VRG VM+GY+K P T Q D
Sbjct: 387 DQCFDPDSIGMTMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETAQTFD 435
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
E G+L TGD G I G L + R K+ + S G+ + P +E A +
Sbjct: 436 EHGFLKTGDAGHIDEQ----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDH 485
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLL 427
+ QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 486 FVEQIAVIADTRKFVSALIVPCFDALEEHAKELNIKYHDRLELLKHSQIIEMFEKRVNEL 545
Query: 428 YGELRKWTSKCSFQIGP 444
L K+ F++ P
Sbjct: 546 QHGLAKFEQVKRFKLLP 562
>gi|320157490|ref|YP_004189869.1| long-chain-fatty-acid--CoA ligase [Vibrio vulnificus MO6-24/O]
gi|319932802|gb|ADV87666.1| long-chain-fatty-acid-CoA ligase [Vibrio vulnificus MO6-24/O]
Length = 601
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 132/437 (30%), Positives = 208/437 (47%), Gaps = 55/437 (12%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ E +D+ T +YTSGTTG PKGVML + N+ Q+ + D L LP H
Sbjct: 171 RLEQANFEDLLTLIYTSGTTGQPKGVMLDYANIAAQLEGHDRRLSLTENDVSLCFLPLSH 230
Query: 78 VYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ERA +++ +G Y ++D L +P M +VP YE ++S I +++ +
Sbjct: 231 VFERAWTFYVLYKGGTNCYLQDTMQVRDALSDIKPTVMCAVPRFYEKIFSAIHEKVSRAP 290
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
R+++ + + + + EG +QPS + L H
Sbjct: 291 LMRKIMFTWAVNMGAKMSVCHQ--EG-------RQPSLM---------------LKKAHA 326
Query: 197 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LA+KLV K+++ +G + + GG L I F+ AIG+ V++GYG+TE++ I+
Sbjct: 327 LADKLVLSKLRALLGGNINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATISCWD 386
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
C S+G + ++KI E NE+L VRG VM+GY+K P T++ D
Sbjct: 387 DKCFNPDSIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLPEETEKTFD 435
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
E G+L TGD G I H G L + R K+ + S G+ + P +E A +
Sbjct: 436 EHGFLKTGDAGHIDEH----------GNLFITDRIKELMKTSGGKYIAPQMIEGAIGKDH 485
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLL 427
I QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 486 FIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRVELIKHHQVVEMLEKRVNDL 545
Query: 428 YGELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 546 QKELAKFEQVKKFKLLP 562
>gi|317051585|ref|YP_004112701.1| AMP-dependent synthetase and ligase [Desulfurispirillum indicum S5]
gi|316946669|gb|ADU66145.1| AMP-dependent synthetase and ligase [Desulfurispirillum indicum S5]
Length = 611
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 139/418 (33%), Positives = 200/418 (47%), Gaps = 60/418 (14%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDK-FLSMLPPWHVYE 80
I +D+ T +YTSGTTG PKGVMLTH N+L + + D+ FLS LP HV E
Sbjct: 178 ITPEDLITVIYTSGTTGVPKGVMLTHSNMLFDACAGVQKLGGMAEDEVFLSFLPLSHVLE 237
Query: 81 RACGYFIFSRGIELMYTA-------VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 133
R GY LMY A V + +++Q +P M+SVP ++E +YS I + +
Sbjct: 238 RTAGYH-----APLMYGAHVAFAENVDKVVENIQEIRPTVMVSVPRLFEKIYSRIYENVH 292
Query: 134 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
+ A RR + + + Y ++R E QP L
Sbjct: 293 QAPAVRRSLFHWAVDVGKQYV-YRRYIEN--------QP---------------VGSLGV 328
Query: 194 LHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
+ LA++LV+ KI+ G + +SGG L I+ F A+G+ V GYGLTE+SP +
Sbjct: 329 KYGLAKRLVFSKIKPRFGGRMRFFISGGAPLDKTINEFMWAVGIPVFEGYGLTETSPALT 388
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
N GSVG ++ TE+K AE E+L VRG QVMQGY+KNP AT Q
Sbjct: 389 LNTIADNRFGSVGQVLDQTEVKT--AEDGELL---------VRGPQVMQGYYKNPEATAQ 437
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
+ DGWL TGDI I + G + + R K+ IV + G+NV P +E
Sbjct: 438 TII-DGWLYTGDIARIDEN----------GFVYIVDRKKEIIVTAGGKNVAPQPIENELK 486
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
I Q V G + A++ P+ E +L A+ + + + +L K + L+ E
Sbjct: 487 LDKYISQAFVYGDRKPYLVALLTPNVERLLEFAQDKKLNYIEIRDLVTHKKVHKLFEE 544
>gi|27364106|ref|NP_759634.1| long-chain-fatty-acid--CoA ligase [Vibrio vulnificus CMCP6]
gi|27360224|gb|AAO09161.1| Long-chain-fatty-acid--CoA ligase [Vibrio vulnificus CMCP6]
Length = 601
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 132/437 (30%), Positives = 208/437 (47%), Gaps = 55/437 (12%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ E +D+ T +YTSGTTG PKGVML + N+ Q+ + D L LP H
Sbjct: 171 RLEQANFEDLLTLIYTSGTTGQPKGVMLDYANIAAQLEGHDRRLSLTENDVSLCFLPLSH 230
Query: 78 VYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ERA +++ +G Y ++D L +P M +VP YE ++S I +++ +
Sbjct: 231 VFERAWTFYVLYKGGTNCYLQDTMQVRDALSDIKPTVMCAVPRFYEKIFSAIHEKVSRAP 290
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
R+++ + + + + EG +QPS + L H
Sbjct: 291 LMRKIMFTWAVNMGAKMSVCHQ--EG-------RQPSLM---------------LKKAHA 326
Query: 197 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LA+KLV K+++ +G + + GG L I F+ AIG+ V++GYG+TE++ I+
Sbjct: 327 LADKLVLSKLRALLGGNINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATISCWD 386
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
C S+G + ++KI E NE+L VRG VM+GY+K P T++ D
Sbjct: 387 DKCFNPDSIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLPEETEKTFD 435
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
E G+L TGD G I H G L + R K+ + S G+ + P +E A +
Sbjct: 436 EHGFLKTGDAGHIDEH----------GNLFITDRIKELMKTSGGKYIAPQMIEGAIGKDH 485
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLL 427
I QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 486 FIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRVELIKHHQVVEMLEKRVNDL 545
Query: 428 YGELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 546 QKELAKFEQVKKFKLLP 562
>gi|423281106|ref|ZP_17260017.1| hypothetical protein HMPREF1203_04234 [Bacteroides fragilis HMW
610]
gi|404583270|gb|EKA87951.1| hypothetical protein HMPREF1203_04234 [Bacteroides fragilis HMW
610]
Length = 601
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 132/441 (29%), Positives = 211/441 (47%), Gaps = 54/441 (12%)
Query: 23 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM--LPPWHVYE 80
G+DD+A +YTSGTTG PKGVML H L R ++DI + DK +SM LP HV+E
Sbjct: 178 GADDLANILYTSGTTGEPKGVMLHHSCYLEAFR-IHDIRLVDMTDKDVSMNFLPLTHVFE 236
Query: 81 RACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
+A Y +G+++ + +++ ++ +P M SVP +E +Y+G+Q++I ++ +
Sbjct: 237 KAWTYLCVHKGVQVCINLRPADIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKIAETTGIK 296
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+++ I++ RI+ R K P ++ L + E
Sbjct: 297 KMLMLDAIKVG-------RIH-NLEYLRVGKTPPKMIQL---------------KYKFYE 333
Query: 200 KLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
K +Y ++ IGI + G ++P I F ++G+ + VGYGLTES+ ++ T
Sbjct: 334 KTIYALLKKTIGIENGNFFPTAGAAVPDEICEFVHSVGIDMLVGYGLTESTATVSCTSKT 393
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
+GSVG + E+KI E NE+L +RG + +GY+K AT A+DE+
Sbjct: 394 GYDIGSVGQVMPEVEVKI--GEDNEIL---------LRGKTITKGYYKKAEATAAAIDEE 442
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GW +TGD G+ G L L R KD S G+ + P LE + I
Sbjct: 443 GWFHTGDAGYFK-----------NGQLYLTERIKDLFKTSNGKYIAPQALETKLVIDRYI 491
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD-ASELSKEKTISLLYGELRKWTS 436
QI +I ++ A+IVP V AK I + D A L K I+L +
Sbjct: 492 DQIAIIADQRKFVSALIVPVYGFVKQYAKEKGIEYKDMAGLLEHPKIIALFRARIDTLQQ 551
Query: 437 KCSF--QIGPIHVVDEPFTVN 455
+ + QI ++ EPF++
Sbjct: 552 QFAHYEQIKRFTLLPEPFSME 572
>gi|444379072|ref|ZP_21178257.1| Long-chain-fatty-acid--CoA ligase [Enterovibrio sp. AK16]
gi|443676909|gb|ELT83605.1| Long-chain-fatty-acid--CoA ligase [Enterovibrio sp. AK16]
Length = 598
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 131/429 (30%), Positives = 203/429 (47%), Gaps = 55/429 (12%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+ T +YTSGTTG PKGVML + N+ QI S ++ + L+ LP HV+ER +
Sbjct: 178 DLMTLIYTSGTTGEPKGVMLDYANVAAQIESHDKVLGISENEVSLAFLPLSHVFERCWSF 237
Query: 86 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
++ G Y + N +++ LQ +P M +VP YE +YS + +++ T+S ++ + R
Sbjct: 238 YVLHHGATNCYLSNTNAIREALQEVKPTVMCAVPRFYEKIYSAVHEKVATASPVKKGMFR 297
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
A + I +TR K+P+ WL + H +A+KLV
Sbjct: 298 AAVYIGNLMAE---------ITRKGKKPA------PWLKS---------AHRMADKLVLS 333
Query: 205 KIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ +G + + GG L I F+ AIGV V++GYG+TE++ I+ S
Sbjct: 334 KLRQLLGGNITMMPCGGAKLEPTIGRFFHAIGVNVKLGYGMTETTATISCWDSGSFDPDS 393
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
+G P+ + E+KI + NE+L VRG VM+GY+ T + DG+L TG
Sbjct: 394 IGMPMPNAEVKI--GQNNEIL---------VRGPMVMRGYYNKAKETAETFTTDGFLKTG 442
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D G I G L + R K+ + S G+ + P +E + I QI V+
Sbjct: 443 DAGHIDAQ----------GNLFITDRIKELMKTSGGKYIAPQVIEGKLGKDHFIEQIAVV 492
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWT 435
+ A+IVP E + AK L+I + D EL K EK + L EL K+
Sbjct: 493 ADARHFVSALIVPCFESLETWAKELNIKYHDRMELIKHSEVVEMFEKRVEELQKELAKFE 552
Query: 436 SKCSFQIGP 444
F + P
Sbjct: 553 QVKKFTLLP 561
>gi|89890831|ref|ZP_01202340.1| Long-chain-fatty-acid--CoA ligase (synthetase) [Flavobacteria
bacterium BBFL7]
gi|89516976|gb|EAS19634.1| Long-chain-fatty-acid--CoA ligase (synthetase) [Flavobacteria
bacterium BBFL7]
Length = 596
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 135/424 (31%), Positives = 206/424 (48%), Gaps = 59/424 (13%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENG-DKFLSMLPPWHVYE 80
I +D+AT +YTSGTTG PKGVML+HKN+ + +P + G K LS LP H+YE
Sbjct: 172 ITEEDLATLIYTSGTTGRPKGVMLSHKNISSNAITSATRLPIDLGRSKALSFLPVCHIYE 231
Query: 81 RACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
R Y G + + ++ + D+L+ QP M +VP + E +Y I
Sbjct: 232 RMLQYMYTYTGTGIYFAESIETISDNLKEIQPEVMSAVPRLLEKVYDKI----------- 280
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL-- 197
I +G LT +K+ + + W W L
Sbjct: 281 -------------------IAKGTDLTGIKKKLFFWAVELGLEWEPYGANGWWYEKKLGL 321
Query: 198 AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR-- 254
A+KL++ K Q A+G + KA SG +L + + A GV V GYGLTE+SPVI+
Sbjct: 322 AKKLIFSKWQEALGGNLKAIASGSAALQPRLARVFNAAGVPVMEGYGLTETSPVISVNDL 381
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
R +G+VG + +T+++I AE E++ + G Q M GY+K+P T +A+
Sbjct: 382 RDGGFKIGTVGKILPNTDVQI--AEDGEII---------INGPQRMMGYYKDPEKTAEAI 430
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
DE+G+ +TGDIG I G L + R K+ S G+ + P +E +S
Sbjct: 431 DENGYFHTGDIGEIDSE----------GFLKITDRKKEMFKTSGGKYIAPQLIENTMKQS 480
Query: 375 SLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL-SKEKTISLLYGELRK 433
I QI+VIG+ ++ P A I P+ E + A R IV+ D +L S+E+ I+ E+
Sbjct: 481 RFIEQIMVIGEGEKMPAAFIQPNFEFLADWANRKGIVYDDWKDLCSQERIINRYQKEIDF 540
Query: 434 WTSK 437
+ +K
Sbjct: 541 YNTK 544
>gi|351728737|ref|ZP_08946428.1| AMP-dependent synthetase and ligase [Acidovorax radicis N35]
Length = 628
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 127/436 (29%), Positives = 211/436 (48%), Gaps = 44/436 (10%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 83
+DD+A VYTSGTTG PKGVMLTH N++ ++++ D + D FLS LP H +ER
Sbjct: 199 ADDLAAIVYTSGTTGKPKGVMLTHHNVVSDVKAVLDRIAPTVDDVFLSFLPLSHTFERTG 258
Query: 84 GYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
GY++ + G + Y +V L +DL+ +P ++SVP +YE +++ + +++ +
Sbjct: 259 GYYLPIAAGSCVAYARSVPQLAEDLKTVRPTVLVSVPRIYERIHAKLLEKLSPTP----- 313
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
++ A R + FC + P A D A + A+ WP + + L
Sbjct: 314 -----WKMQLYEAAQHRGWARFCTMQGLPAP----AAEDGRAAGWMAALPWP---VLQAL 361
Query: 202 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
V K + + G + VSGG L I + +G+ + GYG+TE++PV++ N
Sbjct: 362 VAKPLLAQFGGRVRVAVSGGAPLSPTIAKCFLGLGLPLIQGYGMTETAPVVSVNSLDDND 421
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
VG + +++I G ++VRG VM+GY+K P T + L DGWL
Sbjct: 422 PACVGKALPGVDVRI-----------GENRELQVRGPIVMKGYWKRPEDTAKILSPDGWL 470
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
TGD ++ G + ++GR K+ IV STGE + P +LE A L L+ Q
Sbjct: 471 GTGD-----------QAELVNGRIYIKGRIKEIIVTSTGEKIPPGDLELALLADPLLEQA 519
Query: 381 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSF 440
V+G+++ + V + E A L + D L+ + + K T+ +
Sbjct: 520 FVVGENRPFIACVAVLNAGEWQRLAADLGLSAQDTDSLNHPSVHRAVLARIEKNTASFAR 579
Query: 441 QIGP--IHVVDEPFTV 454
P +H+ +P+T+
Sbjct: 580 YAVPRAVHLTLDPWTI 595
>gi|423301229|ref|ZP_17279253.1| hypothetical protein HMPREF1057_02394 [Bacteroides finegoldii
CL09T03C10]
gi|408471830|gb|EKJ90359.1| hypothetical protein HMPREF1057_02394 [Bacteroides finegoldii
CL09T03C10]
Length = 602
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 210/438 (47%), Gaps = 54/438 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHVYERAC 83
DD+A +YTSGTTG PKGVML H L Q R+ D + + D ++ LP HV+E+A
Sbjct: 180 DDLANILYTSGTTGEPKGVMLHHSCYLEQFRTHDDRLTTMSDKDVSMNFLPLTHVFEKAW 239
Query: 84 GYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y +G+++ + +++ ++ +P M SVP +E +Y+G+Q++I ++ ++ +
Sbjct: 240 CYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKINETTGMKKAL 299
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
IR+ +I+ L + + P ++ + + + EK +
Sbjct: 300 MLDAIRVG-------KIHNLDYLRKGKTPP-------------VMNQLKYKFY---EKTI 336
Query: 203 YKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
Y ++ IGI + G ++P I+ F ++G+ + VGYGLTES+ ++ P
Sbjct: 337 YSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVGYGLTESTATVSCTLPVGYD 396
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
+GSVG + E+KI E NE+L +RG + +GY+K AT A+D DGW
Sbjct: 397 IGSVGVVLPGVEVKI--GEDNEIL---------LRGKTITKGYYKKAEATAAAIDPDGWF 445
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
+TGD G+ G L L R KD S G+ + P LE + I QI
Sbjct: 446 HTGDAGYFK-----------NGQLFLTERIKDLFKTSNGKYIAPQALETKLVIDRYIDQI 494
Query: 381 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSF 440
+I ++ A+IVP V AK I + D SEL + I L+ R T + F
Sbjct: 495 AIIADQRKFVSALIVPVYGYVKEYAKEKGIEYKDMSELLQHPKIVGLF-RARIETLQQQF 553
Query: 441 ----QIGPIHVVDEPFTV 454
QI ++ EPF++
Sbjct: 554 AHYEQIKRFTLLPEPFSM 571
>gi|117926829|ref|YP_867446.1| AMP-dependent synthetase and ligase [Magnetococcus marinus MC-1]
gi|117610585|gb|ABK46040.1| AMP-dependent synthetase and ligase [Magnetococcus marinus MC-1]
Length = 509
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/393 (31%), Positives = 198/393 (50%), Gaps = 54/393 (13%)
Query: 14 GKHYKYETIGSDD---IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFL 70
GK G+ D +AT VYTSGTTG PKGVML+H+NLL + + A D+FL
Sbjct: 93 GKQTWLRVAGATDPHGLATLVYTSGTTGPPKGVMLSHRNLLSNASAALARIRAYTDDRFL 152
Query: 71 SMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGI 128
S LP H ER G Y G E+ ++ + L +DL QP +ISVP ++E ++ +
Sbjct: 153 SFLPLSHALERTAGCYLPMMAGCEVAFSRGIPYLSEDLAVMQPTVLISVPRIFERIHGEV 212
Query: 129 QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 188
Q ++ + + + + + + + ++ G L
Sbjct: 213 QAKLQHAPEWKVRLFQHTVESGWDHFEHQQGRRGLHLK---------------------- 250
Query: 189 AILWPL--HLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 246
+LWPL L+A KL+ KK+ G + VSGG +L HI F+ +G+ + GYGLTE
Sbjct: 251 GLLWPLVKPLVAHKLL-KKLG---GRLRLAVSGGAALDPHISRFFLGLGLPLVQGYGLTE 306
Query: 247 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKN 306
++PV++ P N SVG P+ +++I DA+ G + V+G+ VM GY+ N
Sbjct: 307 TAPVVSVNTPGDNEPSSVGQPLPGVQVRI-DAQ----------GELCVKGASVMSGYWHN 355
Query: 307 PSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLE 366
P AT++ +D++GW +TGD G + G + + GR K+ +V +TG + P +
Sbjct: 356 PRATRRVIDQEGWYHTGDKGEL----------DAAGHIKVVGRLKEILVTATGRKIPPGD 405
Query: 367 LEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
+E A L L Q++V+G+ A++V + E
Sbjct: 406 VEGAILADPLFAQVLVVGEGYPYLAALVVLNSE 438
>gi|441211758|ref|ZP_20975139.1| long-chain-fatty-acid--CoA ligase FadD15 [Mycobacterium smegmatis
MKD8]
gi|440626316|gb|ELQ88150.1| long-chain-fatty-acid--CoA ligase FadD15 [Mycobacterium smegmatis
MKD8]
Length = 599
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 127/388 (32%), Positives = 187/388 (48%), Gaps = 52/388 (13%)
Query: 16 HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE--NGDKFLSML 73
+ + I S D AT +YTSGTTG PKG LTH NLLH+IR + P G++ L L
Sbjct: 172 NKRLANIKSSDPATLIYTSGTTGQPKGCQLTHSNLLHEIRGQKECFPDHLAKGERILVFL 231
Query: 74 PPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
P HV RA F+ + L +T+ ++NL ++P +ISVP V+E +Y+ ++
Sbjct: 232 PLAHVLARAITIGAFANKVTLGFTSDIKNLVPMFGVFKPTLVISVPRVFEKVYNTAEQN- 290
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
AR + I+ A TA + F +++ P L+ +
Sbjct: 291 -----ARNDGKGKIFEIA-AETAIE-----FSKAQDKGGPGLLLRV-------------- 325
Query: 193 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
H + +KLVY K+++A+G A +SGG L + FY +G+ + GYGLTE+S I
Sbjct: 326 -KHAVFDKLVYGKLRAALGGECHAAISGGAPLGERLGHFYRGVGLSIYEGYGLTETSAAI 384
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 311
R +GSVG + ++I D G + V+G V GY+KN TK
Sbjct: 385 TVNRLNDLKVGSVGRLVPGNSMRIAD-----------DGELLVKGGVVFNGYWKNEDETK 433
Query: 312 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 371
+D DGW +TGD+G I + G L + GR K+ IV + G+NV P LE+
Sbjct: 434 AVIDADGWFHTGDLGAIDDN----------GFLTIVGRKKEIIVTAGGKNVAPALLEDRL 483
Query: 372 LRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
LI Q + +G Q A+I D E
Sbjct: 484 RAHPLISQAMAVGDKQPFIAALITIDPE 511
>gi|407939119|ref|YP_006854760.1| AMP-dependent synthetase and ligase [Acidovorax sp. KKS102]
gi|407896913|gb|AFU46122.1| AMP-dependent synthetase and ligase [Acidovorax sp. KKS102]
Length = 618
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 211/437 (48%), Gaps = 43/437 (9%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 83
+DD+A VYTSGTTG PKGVMLTH+N++ ++++ + + D FLS LP H +ER
Sbjct: 188 ADDLAAIVYTSGTTGKPKGVMLTHRNVVSDVKAVLERIAPTVDDVFLSFLPLSHTFERTG 247
Query: 84 GYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
GY++ + G + Y +V L +DL+ +P ++SVP +YE +++ + +++ +
Sbjct: 248 GYYLPIAAGSCVAYARSVAQLAEDLKTIRPTVLVSVPRIYERIHAKLIEKLSPTP----- 302
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP-LHLLAEK 200
++ A + + FC + P+ + W + A+ WP LH L K
Sbjct: 303 -----WKMQLYEAAQNKGWARFCAAQRLPAPTPDASSQAAGW---MAALPWPVLHALVAK 354
Query: 201 LVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
+ + G + VSGG L I + +G+ + GYG+TE++PV++ N
Sbjct: 355 PLLAQFG---GRVRVAVSGGAPLSPTIAKCFLGLGLPLIQGYGMTETAPVVSVNALDDND 411
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
VG + E++I G ++VRG VM+GY+K P T + L DGWL
Sbjct: 412 PACVGKALPGVEVRI-----------GDNHELQVRGPIVMKGYWKRPEDTAKILSPDGWL 460
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
TGD ++ G + ++GR K+ IV STGE V P +LE A L L+ Q
Sbjct: 461 GTGD-----------QADIVNGRIYIKGRIKEIIVTSTGEKVPPGDLELALLADPLLEQA 509
Query: 381 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSF 440
V+G+++ + V + E A L + A L+ + + K T+ +
Sbjct: 510 FVVGENRPFIACVAVLNAGEWPRLAADLGLNPQAADSLNHPSVHRAVLARIEKNTASFAR 569
Query: 441 QIGP--IHVVDEPFTVN 455
P +H+ EP+T+
Sbjct: 570 YAVPRTVHLTLEPWTIE 586
>gi|443293070|ref|ZP_21032164.1| Non-ribosomal peptide synthetase, AMP-dependent synthetase and
ligase [Micromonospora lupini str. Lupac 08]
gi|385882928|emb|CCH20315.1| Non-ribosomal peptide synthetase, AMP-dependent synthetase and
ligase [Micromonospora lupini str. Lupac 08]
Length = 604
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 187/386 (48%), Gaps = 51/386 (13%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDKFLSMLPP 75
+ + + + D+AT +YTSGTTG PKG +LTH+N+ I + ++P G L LP
Sbjct: 177 RRKAVRAGDLATIIYTSGTTGRPKGCVLTHRNMYADIANAVPVLPNLFNAGAATLLFLPL 236
Query: 76 WHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 134
H + R + L + +NL +LQ ++P +++SVP V+E +Y+ KQ
Sbjct: 237 AHAFARLIQIGVVQARATLAHCPDTKNLVGELQEFRPTFVLSVPRVFEKVYNA-AKQKAE 295
Query: 135 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 194
+ V ARA +++ AY+ G L L
Sbjct: 296 ADGKGGVFARAE-QVAIAYSEALETPRGPGLA------------------------LRAQ 330
Query: 195 HLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 253
H + ++LVY+K+++A+G + +SGG L + F+ +GV V GYGLTE+SP AA
Sbjct: 331 HAVFDRLVYRKLRAALGGRCRDAISGGAPLGARLGHFFRGVGVTVLEGYGLTETSPAAAA 390
Query: 254 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 313
PT +G+VG P+ ++I D G + + G V QGY+ N +AT +A
Sbjct: 391 NLPTGTRIGTVGRPLPGVTVRIED-----------DGEILISGDLVFQGYWHNEAATAEA 439
Query: 314 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 373
L DGW TGD+G + G L + GR K+ IV + G+NV P LE+
Sbjct: 440 LSADGWFRTGDLGQL----------DADGYLSITGRKKELIVTAGGKNVAPAVLEDQVRA 489
Query: 374 SSLIRQIVVIGQDQRRPGAIIVPDKE 399
LI Q VV+G + A++ D+E
Sbjct: 490 HPLISQCVVVGDAKPFIAALVTIDEE 515
>gi|118470901|ref|YP_888530.1| AMP-binding protein [Mycobacterium smegmatis str. MC2 155]
gi|399988555|ref|YP_006568905.1| Long-chain fatty-acid-CoA ligase [Mycobacterium smegmatis str. MC2
155]
gi|118172188|gb|ABK73084.1| AMP-binding enzyme [Mycobacterium smegmatis str. MC2 155]
gi|399233117|gb|AFP40610.1| Long-chain fatty-acid-CoA ligase [Mycobacterium smegmatis str. MC2
155]
Length = 599
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 127/386 (32%), Positives = 186/386 (48%), Gaps = 52/386 (13%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE--NGDKFLSMLPP 75
+ I S D AT +YTSGTTG PKG LTH NLLH+IR + P G++ L LP
Sbjct: 174 RLANIKSSDPATLIYTSGTTGQPKGCQLTHSNLLHEIRGQKECFPDHLAKGERILVFLPL 233
Query: 76 WHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 134
HV RA F+ + L +T+ ++NL ++P +ISVP V+E +Y+ ++
Sbjct: 234 AHVLARAITIGAFANKVTLGFTSDIKNLVPMFGVFKPTLVISVPRVFEKVYNTAEQN--- 290
Query: 135 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 194
AR + I+ A TA + F +++ P L+ +
Sbjct: 291 ---ARNDGKGKIFEIA-AETAIE-----FSKAQDKGGPGLLLRV---------------K 326
Query: 195 HLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 253
H + +KLVY K+++A+G A +SGG L + FY +G+ + GYGLTE+S I
Sbjct: 327 HAVFDKLVYGKLRAALGGECHAAISGGAPLGERLGHFYRGVGLSIYEGYGLTETSAAITV 386
Query: 254 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 313
R +GSVG + ++I D G + V+G V GY+KN TK
Sbjct: 387 NRLNDLKVGSVGRLVPGNSMRIAD-----------DGELLVKGGVVFNGYWKNEDETKAV 435
Query: 314 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 373
+D DGW +TGD+G I + G L + GR K+ IV + G+NV P LE+
Sbjct: 436 IDADGWFHTGDLGAIDDN----------GFLTIVGRKKEIIVTAGGKNVAPALLEDRLRA 485
Query: 374 SSLIRQIVVIGQDQRRPGAIIVPDKE 399
LI Q + +G Q A+I D E
Sbjct: 486 HPLISQAMAVGDKQPFIAALITIDPE 511
>gi|371775800|ref|ZP_09482122.1| long chain fatty-acid CoA ligase [Anaerophaga sp. HS1]
Length = 606
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 131/442 (29%), Positives = 210/442 (47%), Gaps = 57/442 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E+I DD+ T +YTSGTTG PKGVML+H+N+L + ++++ P D+ LS LP HVY
Sbjct: 168 ESIKPDDLLTIIYTSGTTGLPKGVMLSHRNILSNVEGVFNLYPLGPDDRILSFLPLCHVY 227
Query: 80 ERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ER Y +G + Y + + +L + ++VP V E +Y +I +
Sbjct: 228 ERMVNYLFQWKGCGIYYAENLGTIAQNLAEVRASAFVTVPRVMERIYD----RIVSKGED 283
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
R + R + ++ R+ N K W R LW +A
Sbjct: 284 LRGIKRRIFFMALKIGERYRV--------NGKHGP-------WYGLR-----LW----IA 319
Query: 199 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR--- 254
KLV+ K Q G K +SGG +L + + A G+ + GYG+TE+SPVIAA
Sbjct: 320 RKLVFAKWQQTFGGKLKFVISGGAALQPRLSRLFFAAGIPLMEGYGMTETSPVIAANHLS 379
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
P ++G+VG + + ++KI D G + V+G VM GY+K+ T + L
Sbjct: 380 EPNSLLIGTVGPVLKNIQVKIDD-----------DGEILVKGPSVMMGYYKDKKNTAEVL 428
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
D+DGWL+TGDIG + G L + R K+ S+G+ + P +E S
Sbjct: 429 DKDGWLHTGDIG----------TFEKGKFLKITDRKKEMFKTSSGKYIAPQAIENILKES 478
Query: 375 SLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRK 433
I Q +V+G++++ A+I P+ E + + A I D EL + + + E+ K
Sbjct: 479 FFIEQAMVVGENEKFASALISPNFEYLHVWANDRHIHFRDNQELIRHPDVLKVFQKEVEK 538
Query: 434 WTSKC--SFQIGPIHVVDEPFT 453
+ + + QI +V E ++
Sbjct: 539 YNKQLGRTEQIKRFRLVHEEWS 560
>gi|238918664|ref|YP_002932178.1| AMP-binding enzyme [Edwardsiella ictaluri 93-146]
gi|238868232|gb|ACR67943.1| AMP-binding enzyme [Edwardsiella ictaluri 93-146]
Length = 603
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 203/409 (49%), Gaps = 49/409 (11%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI-VPAENGDKFLSMLPPWHVYERAC 83
DD+ T +YTSGTTG PKGVML ++NL Q+ L+D + D L LP HV+ERA
Sbjct: 183 DDLFTLIYTSGTTGEPKGVMLDYRNLAAQL-YLHDARLNVSEQDVSLCFLPLSHVFERAW 241
Query: 84 GYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
+++ G + +Y NL ++ +Q +P M +VP YE ++S +Q ++ + RR +
Sbjct: 242 SFYVMHSGAQNVYLHDTNLVREAMQAVRPTMMCAVPRFYEKIFSAVQARVAQAPWLRRQL 301
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
+A K+ + + R+Q R++ A +H LA++LV
Sbjct: 302 ------FHWALWCGKQRFLNERVGRSQ--------------GRLMTA----MHRLADRLV 337
Query: 203 YKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
K+++ +G + + G L H+ LF++A+G+ ++ GYG+TE+ ++
Sbjct: 338 LSKLRAILGGRVRFLPAAGAKLDDHVILFFQALGLNIKYGYGMTETCATVSCWEEQGFRF 397
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
GS+G P+ E++I E+NE+ +VRG VM+GYF P T Q DGWL
Sbjct: 398 GSIGRPLPGVEVRI--GESNEI---------QVRGPIVMRGYFNKPQETAQTFTADGWLK 446
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD G + G L + R KD + S G+ + P +E R I+Q+
Sbjct: 447 TGDAGALDAQ----------GHLFITERLKDLMKTSNGKYIAPQLVEGTLARDRFIKQVA 496
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
VI ++ A+IVP + + A+ +++ + D +L + I L+ +
Sbjct: 497 VIADARKFVSALIVPCFDSLEEYARSINLKYHDRLDLLRHSHIVALFEQ 545
>gi|53711664|ref|YP_097656.1| long-chain-fatty-acid-CoA ligase [Bacteroides fragilis YCH46]
gi|60679909|ref|YP_210053.1| AMP binding long chain acyl-CoA synthetase [Bacteroides fragilis
NCTC 9343]
gi|265765048|ref|ZP_06093323.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|336407849|ref|ZP_08588345.1| hypothetical protein HMPREF1018_00360 [Bacteroides sp. 2_1_56FAA]
gi|375356753|ref|YP_005109525.1| putative AMP binding long chain acyl-CoA synthetase [Bacteroides
fragilis 638R]
gi|383116664|ref|ZP_09937412.1| hypothetical protein BSHG_1256 [Bacteroides sp. 3_2_5]
gi|423248321|ref|ZP_17229337.1| hypothetical protein HMPREF1066_00347 [Bacteroides fragilis
CL03T00C08]
gi|423253270|ref|ZP_17234201.1| hypothetical protein HMPREF1067_00845 [Bacteroides fragilis
CL03T12C07]
gi|423259296|ref|ZP_17240219.1| hypothetical protein HMPREF1055_02496 [Bacteroides fragilis
CL07T00C01]
gi|423263732|ref|ZP_17242735.1| hypothetical protein HMPREF1056_00422 [Bacteroides fragilis
CL07T12C05]
gi|423269687|ref|ZP_17248659.1| hypothetical protein HMPREF1079_01741 [Bacteroides fragilis
CL05T00C42]
gi|423272755|ref|ZP_17251702.1| hypothetical protein HMPREF1080_00355 [Bacteroides fragilis
CL05T12C13]
gi|423282376|ref|ZP_17261261.1| hypothetical protein HMPREF1204_00799 [Bacteroides fragilis HMW
615]
gi|52214529|dbj|BAD47122.1| putative long-chain-fatty-acid-CoA ligase [Bacteroides fragilis
YCH46]
gi|60491343|emb|CAH06091.1| putative AMP binding long chain acyl-CoA synthetase [Bacteroides
fragilis NCTC 9343]
gi|251948055|gb|EES88337.1| hypothetical protein BSHG_1256 [Bacteroides sp. 3_2_5]
gi|263254432|gb|EEZ25866.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|301161434|emb|CBW20974.1| putative AMP binding long chain acyl-CoA synthetase [Bacteroides
fragilis 638R]
gi|335944928|gb|EGN06745.1| hypothetical protein HMPREF1018_00360 [Bacteroides sp. 2_1_56FAA]
gi|387776876|gb|EIK38976.1| hypothetical protein HMPREF1055_02496 [Bacteroides fragilis
CL07T00C01]
gi|392657170|gb|EIY50807.1| hypothetical protein HMPREF1067_00845 [Bacteroides fragilis
CL03T12C07]
gi|392660428|gb|EIY54042.1| hypothetical protein HMPREF1066_00347 [Bacteroides fragilis
CL03T00C08]
gi|392700533|gb|EIY93695.1| hypothetical protein HMPREF1079_01741 [Bacteroides fragilis
CL05T00C42]
gi|392706844|gb|EIY99965.1| hypothetical protein HMPREF1056_00422 [Bacteroides fragilis
CL07T12C05]
gi|392708319|gb|EIZ01426.1| hypothetical protein HMPREF1080_00355 [Bacteroides fragilis
CL05T12C13]
gi|404581944|gb|EKA86639.1| hypothetical protein HMPREF1204_00799 [Bacteroides fragilis HMW
615]
Length = 601
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 132/442 (29%), Positives = 213/442 (48%), Gaps = 56/442 (12%)
Query: 23 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM--LPPWHVYE 80
++D+A +YTSGTTG PKGVML H L R ++DI + DK +SM LP HV+E
Sbjct: 178 SAEDLANILYTSGTTGEPKGVMLHHSCYLEAFR-IHDIRLVDMTDKDVSMNFLPLTHVFE 236
Query: 81 RACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
+A Y +G+++ + +++ ++ +P M SVP +E +Y+G+Q++I ++ +
Sbjct: 237 KAWTYLCVHKGVQVCINLRPADIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKIAETTGIK 296
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+++ I++ RI+ R K P ++ L + E
Sbjct: 297 KMLMLDAIKVG-------RIH-NLDYLRVGKTPPRMIQL---------------KYKFYE 333
Query: 200 KLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
K +Y ++ IGI + G ++P I F ++G+ + VGYGLTES+ ++ T
Sbjct: 334 KTIYALLKKTIGIENGNFFPTAGAAVPDEICEFVHSVGIDMLVGYGLTESTATVSCTSKT 393
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
+GSVG + E+KI E NE+L +RG + +GY+K AT A+DE+
Sbjct: 394 GYDIGSVGQVMPEVEVKI--GEDNEIL---------LRGKTITKGYYKKAEATAAAIDEE 442
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GW +TGD G+ G L L R KD S G+ + P LE + I
Sbjct: 443 GWFHTGDAGYFK-----------NGQLYLTERIKDLFKTSNGKYIAPQALETKLVIDRYI 491
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 437
QI +I ++ A+IVP V AK I + D +EL + I+ L+ R T +
Sbjct: 492 DQIAIIADQRKFVSALIVPVYGFVKQYAKEKGIEYKDMAELLEHPKITALF-RARIDTLQ 550
Query: 438 CSF----QIGPIHVVDEPFTVN 455
F QI ++ EPF++
Sbjct: 551 QQFAHYEQIKRFTLLPEPFSME 572
>gi|254492052|ref|ZP_05105229.1| AMP-binding enzyme, putative [Methylophaga thiooxidans DMS010]
gi|224462749|gb|EEF79021.1| AMP-binding enzyme, putative [Methylophaga thiooxydans DMS010]
Length = 599
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 130/415 (31%), Positives = 201/415 (48%), Gaps = 59/415 (14%)
Query: 27 IATYVYTSGTTGNPKGVMLTHKNLLHQIR---SLYDIVPAENGDKFLSMLPPWHVYERAC 83
+A+ +YTSGTTG PKGVML+H N+L ++I P D FLS LP H ER
Sbjct: 184 LASIIYTSGTTGRPKGVMLSHHNMLSVAAGSLQYFEIFP---NDLFLSFLPLSHTLERTA 240
Query: 84 GYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
GY++ G + Y+ + L DD+Q +P +I+VP ++E +YS +Q Q+ + V
Sbjct: 241 GYYLPIMAGASVAYSRGIPQLADDMQMVKPTILIAVPRIFERIYSRLQAQL----DQKPV 296
Query: 142 VARALIRI--SFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
++R L ++ S ++ FK + + +P + L L
Sbjct: 297 ISRFLFQLTCSTGWSKFK-----YQQGKQGWRPGF------------------SLLPLLN 333
Query: 200 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
K+V +K+ +G + VSGG LP + +G+ + GYGLTE+SPVI+ P
Sbjct: 334 KIVAQKVHQRMGGQVRLAVSGGAPLPFQAAKLFIGLGLNLLQGYGLTETSPVISVNEPAN 393
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
N SVG I +KI D +E+L VRG M GY+ N AT QA++ +G
Sbjct: 394 NDPTSVGRAIPGVAVKIGD--NDELL---------VRGPGNMMGYWNNHKATAQAINAEG 442
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
WL+TGD I + + + GR KD +VLS GE V P ++E A
Sbjct: 443 WLHTGDQAKIDDNDH----------IHITGRIKDILVLSNGEKVPPSDMESAIQSGEYFE 492
Query: 379 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRK 433
Q +++G+ + A+IV + ++ AK L + D S L + + +LR+
Sbjct: 493 QALIVGEGESYLSALIVLNTDKWFSLAKELGLDAMDNSSLESKNLHQFVIQKLRQ 547
>gi|260913053|ref|ZP_05919535.1| long-chain-fatty-acid--CoA ligase [Pasteurella dagmatis ATCC 43325]
gi|260632640|gb|EEX50809.1| long-chain-fatty-acid--CoA ligase [Pasteurella dagmatis ATCC 43325]
Length = 606
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 132/417 (31%), Positives = 199/417 (47%), Gaps = 54/417 (12%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIR---SLYDIVPAENGDKFLSMLPPWHVYERA 82
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 179 DLFTLIYTSGTTGEPKGVMLDYANLAHQLEAHDTAFTTLNVNQYDVSLSFLPFSHIFERA 238
Query: 83 CGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
++ RG Y N +++ L +P M +VP YE +Y+ + ++ +S RR
Sbjct: 239 WVAYVLHRGAVNCYLEDSNKVREALSELRPTLMCAVPRFYEKIYTAVWDKVQKASFIRRT 298
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
+ I I + F L R Q +P I IL + LA+KL
Sbjct: 299 IFNWAISIG---------QKRFELAR-QTKP--------------IPFILRKKYALADKL 334
Query: 202 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
V K++ +G K GG L I LF+ +IG+ +++GYG+TE++ ++ +
Sbjct: 335 VLSKLRKLLGGRIKMMPCGGAKLEPTIGLFFHSIGINIKLGYGMTETTATVSCWKDNSFD 394
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
S+G + TE+KI E NE+L VRG VM+GY+K P TK+ EDG+L
Sbjct: 395 PNSIGTLMPGTEVKI--GENNEIL---------VRGGMVMRGYYKKPQETKETFTEDGFL 443
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
TGD G G L + R K+ + S G+ + P +E + I QI
Sbjct: 444 KTGDAGEFD----------ANGNLYITDRIKELMKTSNGKYIAPQYIETKVGKDKFIEQI 493
Query: 381 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY----GELRK 433
VI ++ A+IVP + AK+L+I + D EL K I ++ EL+K
Sbjct: 494 AVIADAKKYVSALIVPCFTSLEEHAKQLNIKYQDRMELIKHSEIIKMFEQRINELQK 550
>gi|422911306|ref|ZP_16945932.1| AMP-binding enzyme family protein [Vibrio cholerae HE-09]
gi|341631825|gb|EGS56702.1| AMP-binding enzyme family protein [Vibrio cholerae HE-09]
Length = 601
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 134/435 (30%), Positives = 207/435 (47%), Gaps = 55/435 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+
Sbjct: 173 EQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVF 232
Query: 80 ERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ERA ++ RG Y V ++++ L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYRGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLV 292
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
R+V+ F + C + Q+QPS++ L H LA
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------------LKQSHQLA 328
Query: 199 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+KLV K+++ +G K GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 329 DKLVLSKLRALLGGRIKFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDH 388
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
C S+G + ++KI E NE+L VRG VM+GY+K T ++ DE
Sbjct: 389 CFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLDKETAESFDEH 437
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
G+L TGD G I + G L + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 429
QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNDLQK 547
Query: 430 ELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFRLLP 562
>gi|424842397|ref|ZP_18267022.1| AMP-forming long-chain acyl-CoA synthetase [Saprospira grandis DSM
2844]
gi|395320595|gb|EJF53516.1| AMP-forming long-chain acyl-CoA synthetase [Saprospira grandis DSM
2844]
Length = 607
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 213/436 (48%), Gaps = 45/436 (10%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
+ I ++D+AT +YTSGTTG PKGVML+H N+ +R + +P + D LS LP HV+
Sbjct: 175 DKIKAEDLATIIYTSGTTGKPKGVMLSHNNIATNVRDVLPFIPLQPQDIALSFLPICHVF 234
Query: 80 ERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ER Y ++G ++ Y + L + LQ +PH+ +VP + E +Y + ++
Sbjct: 235 ERTVTYSYMAKGAQVFYAKDLDTLSETLQDIRPHFFTTVPRLLEKVYEKMMLKVQAEGGL 294
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
+ + + ++ Y DW A + AI W +A
Sbjct: 295 KEKIFNWALGLTEKYD------------------------FDWQ-AAGLEAIKWK---IA 326
Query: 199 EKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR--R 255
+KLV+ K++ +G G V+G + P + + A+GV ++ GYGLTE+SP I+
Sbjct: 327 DKLVFSKVRERLGGRLKGIVTGAAACPPRMTQLFSAVGVPIREGYGLTETSPAISINIFE 386
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
P ++GSVG + ++KI ++ ++G V V+G+ VM GY++ T + +
Sbjct: 387 PYQAMIGSVGPILPSVQVKIDQDDSY----GPNEGEVLVKGNSVMMGYYRKEDKTAEVFN 442
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
++GW TGDIG I +++ L + R K+ + S G+ V P +E
Sbjct: 443 DEGWFLTGDIGKIV------ENKKGIKFLKITDRKKELLKTSGGKYVAPTPIESTLKEDL 496
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE-LSKEKTISLLYGELRKW 434
L+ Q++V+G+ ++ A+I P+ E + + +I + E ++ K ++ + ++
Sbjct: 497 LVEQVMVVGEKRKFVSALIQPNFESLKNWCQDKNIAWSKPEEVITNPKVLAYFQAVINRY 556
Query: 435 TSKCSF--QIGPIHVV 448
+ S QI H+V
Sbjct: 557 NPRFSKVEQIKKFHLV 572
>gi|269127261|ref|YP_003300631.1| AMP-dependent synthetase and ligase [Thermomonospora curvata DSM
43183]
gi|268312219|gb|ACY98593.1| AMP-dependent synthetase and ligase [Thermomonospora curvata DSM
43183]
Length = 605
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 118/378 (31%), Positives = 184/378 (48%), Gaps = 52/378 (13%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE---NGDKFLSMLPPWHVYERA 82
D+AT +YTSGTTG PKG L+H N + R+ +E G L LP HV+ R
Sbjct: 179 DLATLIYTSGTTGRPKGCELSHGNFVVTTRNAIKGALSEVAMEGSSTLLFLPLAHVFARL 238
Query: 83 CGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
GI L ++ + NL DL ++P ++++VP V+E +Y+G +++ +
Sbjct: 239 IQVACIESGIVLGHSDIPNLLPDLASFKPTFLLAVPRVFEKVYNGAEQKAIAGGKGKIFK 298
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
A A I+++ G L +K + + LV
Sbjct: 299 AAADTAIAYSKALDAPGGPGLGLKLKRK--------------------------VFDLLV 332
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
Y+K++ A+G K VSGG +L + F+ +G+ + GYGLTE++ ++ RP+ +
Sbjct: 333 YRKLREAVGGQVKYAVSGGAALGERLGHFFRGVGIVILEGYGLTETTAPVSVNRPSALRV 392
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
G+VG P+ ++I D G + V+G VMQGY+ N +ATK+A+ EDGW +
Sbjct: 393 GTVGQPVPGVTVRIAD-----------DGEILVKGVNVMQGYWANETATKEAI-EDGWFH 440
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGDIG + G L + GR K+ +V + G+NV P LE+ LI Q V
Sbjct: 441 TGDIG----------TMDADGFLKITGRKKEILVTAGGKNVAPAPLEDRLRAHPLISQCV 490
Query: 382 VIGQDQRRPGAIIVPDKE 399
VIG ++ A+I D E
Sbjct: 491 VIGDGRKFISALITLDNE 508
>gi|254488381|ref|ZP_05101586.1| AMP-dependent synthetase and ligase [Roseobacter sp. GAI101]
gi|214045250|gb|EEB85888.1| AMP-dependent synthetase and ligase [Roseobacter sp. GAI101]
Length = 651
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 134/437 (30%), Positives = 212/437 (48%), Gaps = 51/437 (11%)
Query: 23 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERA 82
+ DIAT ++TSGTTG PKG ML+H LL ++ + +P D FLS+LP H +ER
Sbjct: 224 AAQDIATVIHTSGTTGQPKGAMLSHHALLWNAEAVTEFIPPLTSDIFLSLLPLAHSFERT 283
Query: 83 CGYFIFSRGIE--LMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
Y + G + ++ L+ DL +P +++VP +YE + +Q + S RR
Sbjct: 284 ATYHMAMMGGSRVVFARSIDTLRQDLLEVRPTILVAVPRLYERICEAVQSKAAHSPITRR 343
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
++ +A + + F+ +G K P + L ++WP + E+
Sbjct: 344 LLGQA---ATIGWQHFE-ARQG-----RAKPPGAITRL-----------LVWP---MLER 380
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR-PTC 258
LV + + A G + + VSGG L + F +G+ + GYGLTE++PV+ A C
Sbjct: 381 LVARPVLRAFGGNVRVAVSGGAPLSLEASHFLIGLGLPLVEGYGLTEAAPVVTATTLKDC 440
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
N GS G P+ EI++ GS G + V+ +M GY+ +P + A+D+DG
Sbjct: 441 NP-GSAGRPLRGIEIRL-----------GSDGELLVKSPSLMSGYWHDPERSAAAIDQDG 488
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
WL+TGD IA H+ G L + GR KD IVLSTG+ V +E A + L
Sbjct: 489 WLHTGD---IAEFHA--------GRLFITGRLKDLIVLSTGKKVVSATVEAAVVADPLFE 537
Query: 379 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKC 438
Q VIG ++ AI+V ++ + AK+ + AD + + + E +
Sbjct: 538 QCCVIGDNRSCIVAIVVLCQDRWEVFAKQHHLDPADPNMPTAAAALLTRVTEAMRDPPPF 597
Query: 439 SFQIGPIHVVDEPFTVN 455
+ QI +H V P+TV
Sbjct: 598 A-QIRAVHAVLLPWTVE 613
>gi|387774023|ref|ZP_10129303.1| AMP-binding enzyme [Haemophilus parahaemolyticus HK385]
gi|386903110|gb|EIJ67930.1| AMP-binding enzyme [Haemophilus parahaemolyticus HK385]
Length = 591
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 129/407 (31%), Positives = 197/407 (48%), Gaps = 53/407 (13%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+ T +YTSGTTG+PKGVML + NL HQ++S + D LS LP H++ERA
Sbjct: 176 DDLFTLIYTSGTTGDPKGVMLDYANLAHQLQSHDQALNISEQDISLSFLPLSHIFERAWV 235
Query: 85 YFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
+IF RG Y ++ L +P M +VP YE +Y+ + ++ + RR +
Sbjct: 236 AYIFHRGTTNCYLENTDQIRQALVETKPTVMCAVPRFYEKIYAAVLDKVEKAPFIRRTL- 294
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL-WARIICAILWPLHLLAEKLV 202
+A A ++ Y+ +PS WL W H A+KLV
Sbjct: 295 -----FHWAIQAGEKHYQS-------AKPS------RWLKWQ----------HKWADKLV 326
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
K+++ +G + GG L I F+ ++GV V++GYG+TE++ ++
Sbjct: 327 LSKLRALLGGQVRMMPCGGAKLEPTIGKFFHSLGVNVKLGYGMTETTATVSCWEDHGFNP 386
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
S+G + +TE+KI E NE+L VRG VM+GY+K P T A EDG+L
Sbjct: 387 NSIGKLMPNTEVKI--GENNEIL---------VRGGMVMRGYYKKPEETANAFTEDGFLK 435
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD G I H G L + R K+ + S G+ + P +E + I QI
Sbjct: 436 TGDAGEIDEH----------GNLHITDRIKELMKTSNGKYIAPQYIEGKIGKDKFIEQIA 485
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
+I ++ A+IVP + + AK+L+I + D EL K I ++
Sbjct: 486 IIADAKKYVSALIVPCFDSLEEYAKQLNIKYQDRLELIKHAEIIQMF 532
>gi|319774953|ref|YP_004137441.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae F3047]
gi|317449544|emb|CBY85748.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
F3047]
Length = 599
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 127/407 (31%), Positives = 193/407 (47%), Gaps = 47/407 (11%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 178 DLFTIIYTSGTTGEPKGVMLDYANLAHQLETHDLSLNVTDQDISLSFLPFSHIFERAWAA 237
Query: 86 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 238 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 297
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
I + Y F L N K +L L L LA+KLV
Sbjct: 298 WAISVGQKY---------FDLRANNKAIPFL---------------LKKLFALADKLVLS 333
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 334 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 393
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
+G + ++KI E NE+L VRG VM+GY+K P T QA EDG+L TG
Sbjct: 394 IGTLMPKAKVKI--GENNEIL---------VRGGMVMKGYYKKPEETAQAFTEDGFLKTG 442
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 443 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 492
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
++ A+IVP + + AK+L+I + D EL K I ++ +
Sbjct: 493 ADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSDILKMFEQ 539
>gi|387128044|ref|YP_006296649.1| long-chain-fatty-acid--CoA ligase [Methylophaga sp. JAM1]
gi|386275106|gb|AFI85004.1| Long-chain-fatty-acid--CoA ligase [Methylophaga sp. JAM1]
Length = 604
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 137/444 (30%), Positives = 214/444 (48%), Gaps = 69/444 (15%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLL---HQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+ +A+ +YTSGTTG KGVML+H N+L + ++I+P D FLS LP H ER
Sbjct: 183 EQLASIIYTSGTTGRSKGVMLSHHNMLSVAYGSLQFFEILP---DDVFLSFLPLSHTLER 239
Query: 82 ACGYF---------IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
GY+ +FSR I L L DD+++ QP MI+VP ++E +Y + KQ+
Sbjct: 240 TGGYYLPMMAGSKVVFSRSIPL-------LADDMRQVQPTIMIAVPRIFERIYDRVHKQL 292
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
S +R + + + + +KR F + +K S + L
Sbjct: 293 AEGSWLKRRIFKLAVEV-----GWKR----FQYQQGRKYWSPSLLLW------------- 330
Query: 193 PLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
LL + +V K Q G + VSGG +LP+H + + + + GYGLTE+SPVI+
Sbjct: 331 --PLLYKLVVTKFHQRLGGKLRLAVSGGAALPVHAAKMFIGLDLVLLQGYGLTETSPVIS 388
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
P+ N SVG I E++I G ++V+G M GY+ N AT Q
Sbjct: 389 VNEPSSNDPASVGRAIQGVEVRI-----------GKDEELEVKGPGNMLGYWNNHKATAQ 437
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
+D DGWL+TGD I+ G + + GR KD +VL+ GE V P ++E A +
Sbjct: 438 TIDADGWLHTGDKAHISE----------SGHIYIVGRIKDILVLNNGEKVPPADIEAAIV 487
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELR 432
+ LI Q +V+G+ Q A++V + E A++L + L + LR
Sbjct: 488 SNGLIDQALVVGEGQPYLAALLVINGESWPQIAQQLGLDPLQNESLGSKVLQQHFVRLLR 547
Query: 433 KWTSK--CSFQIGPIHVVDEPFTV 454
+W + +I +H+ +P+T+
Sbjct: 548 QWLFEFPAYARIRRVHLTLQPWTI 571
>gi|149277989|ref|ZP_01884128.1| AMP-binding enzyme, putative [Pedobacter sp. BAL39]
gi|149231187|gb|EDM36567.1| AMP-binding enzyme, putative [Pedobacter sp. BAL39]
Length = 637
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 124/391 (31%), Positives = 199/391 (50%), Gaps = 50/391 (12%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACG 84
D ++ +YTSGTTG PKGVML+H NL+ ++ + +P + + FLS LP HV+ER
Sbjct: 191 DTSSLIYTSGTTGTPKGVMLSHSNLVENVKVCLEQIPVIDETETFLSFLPLSHVFERTAT 250
Query: 85 YFIF-SRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y + ++G ++ + ++ L ++ +P M VP + E ++ K I + +A +
Sbjct: 251 YHVCCAQGCKIAFAQSLELLAKNMGEIRPTVMNCVPRLLERIHD---KAIKSGTADGGLK 307
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
++ + A ++ I E N K P L A LAEKLV
Sbjct: 308 SKIFLWALEAGQQYRNIKE------NGKTPGLLSA---------------GKKALAEKLV 346
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
+ KI+ G + K +SGG +LP ++ F+ +G+K+ G+GLTE+SPV+A V
Sbjct: 347 FSKIKEKTGGNLKFMISGGAALPKNVGEFFGNLGIKILEGFGLTETSPVMAVTEFHRQVY 406
Query: 262 GSVGHPINHTEI--------KIVDAETNEVLPAG---SKGIVKVRGSQVMQGYFKNPSAT 310
G+VG I EI K+++ +T+E +G + VRG VMQGYF P+ T
Sbjct: 407 GTVGRVIPGIEIGIQHVETKKMINIQTHETFKENFECEEGEIIVRGHCVMQGYFNKPAET 466
Query: 311 KQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA 370
+A+D+D W +TGDIG R G L + R K+ IV + G+NV P +E
Sbjct: 467 AEAIDKDNWFHTGDIG-----------RFYKGNLQITDRLKNMIVNAYGKNVYPTPVENN 515
Query: 371 ALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 401
L+S I + +IG + A ++P++E +
Sbjct: 516 YLKSLKIDGLFLIGDKREYLTAFVIPNRENM 546
>gi|170741077|ref|YP_001769732.1| AMP-dependent synthetase and ligase [Methylobacterium sp. 4-46]
gi|168195351|gb|ACA17298.1| AMP-dependent synthetase and ligase [Methylobacterium sp. 4-46]
Length = 612
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 133/388 (34%), Positives = 191/388 (49%), Gaps = 49/388 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
D +AT +YTSGTTG PKGVML+H+NLL +++ D P + D FLS LP HV+ER G
Sbjct: 190 DALATIIYTSGTTGLPKGVMLSHRNLLSVAQAVLDRNPGSDRDVFLSYLPLAHVFERVVG 249
Query: 85 -YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y G +++ +V +L DDL+ +P ++ VP + + L ++ T AAR
Sbjct: 250 CYLPLILGARVVFARSVEHLPDDLRVARPTILLVVPSLLDRL-----RRTVTERAARTAP 304
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
R L+R + A R ++ F R+ + AR L L +A +
Sbjct: 305 TRWLLRAALA-----RGWDLFAARRDGCRLGL---------ARTAAGAL--LRAVAAAPI 348
Query: 203 YKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
+ + G + VSGG LP F +G+ + GYGLTE++ + + V G
Sbjct: 349 RRSLG---GRLRLAVSGGAPLPDETARFCLGLGLPLVEGYGLTEAASAVTGFQVGRTVPG 405
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
SVG P+ E++I D T E+L VR VM GY++ P T Q L GWL T
Sbjct: 406 SVGPPLPGMEVRIAD--TGEIL---------VRSPGVMIGYWRRPDLTAQVL-HGGWLYT 453
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD+G + GG L + GR K+ IVLSTGE V P +E A R L RQ +
Sbjct: 454 GDLGVLR-----------GGCLYVAGRKKEMIVLSTGEKVSPEAVEAAITRDPLFRQAMA 502
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSI 410
+G+ Q R + V D+ A+RL +
Sbjct: 503 VGEGQSRLTVLAVVDEAAWAPLARRLGL 530
>gi|329123150|ref|ZP_08251720.1| long-chain-fatty-acid--CoA ligase [Haemophilus aegyptius ATCC
11116]
gi|327471705|gb|EGF17147.1| long-chain-fatty-acid--CoA ligase [Haemophilus aegyptius ATCC
11116]
Length = 607
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 127/407 (31%), Positives = 193/407 (47%), Gaps = 47/407 (11%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 186 DLFTIIYTSGTTGEPKGVMLDYANLAHQLETHDLSLNVTDQDISLSFLPFSHIFERAWAA 245
Query: 86 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 246 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 305
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
I + Y F L N K +L L L LA+KLV
Sbjct: 306 WAISVGQKY---------FDLRANNKAIPFL---------------LKKLFALADKLVLS 341
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 342 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 401
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
+G + ++KI E NE+L VRG VM+GY+K P T QA EDG+L TG
Sbjct: 402 IGTLMPKAKVKI--GENNEIL---------VRGGMVMKGYYKKPEETAQAFTEDGFLKTG 450
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 451 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 500
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
++ A+IVP + + AK+L+I + D EL K I ++ +
Sbjct: 501 ADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSDILKMFEQ 547
>gi|154492200|ref|ZP_02031826.1| hypothetical protein PARMER_01834 [Parabacteroides merdae ATCC
43184]
gi|423345257|ref|ZP_17322946.1| hypothetical protein HMPREF1060_00618 [Parabacteroides merdae
CL03T12C32]
gi|423722201|ref|ZP_17696377.1| hypothetical protein HMPREF1078_00440 [Parabacteroides merdae
CL09T00C40]
gi|154087425|gb|EDN86470.1| AMP-binding enzyme [Parabacteroides merdae ATCC 43184]
gi|409223043|gb|EKN15980.1| hypothetical protein HMPREF1060_00618 [Parabacteroides merdae
CL03T12C32]
gi|409242692|gb|EKN35453.1| hypothetical protein HMPREF1078_00440 [Parabacteroides merdae
CL09T00C40]
Length = 635
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 220/427 (51%), Gaps = 49/427 (11%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
+++ ++D AT YTSGTT +PKGV+LTH+N + V ++ + L +LP H +
Sbjct: 172 QSLQNNDYATITYTSGTTADPKGVILTHRNYTANVEQALSCVDIDDTWRTLIILPLDHCF 231
Query: 80 ERACGYFIF-SRG-----IELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQK 130
G++IF S+G +++ T + LK+ +++ ++P+ ++SVP + + I++
Sbjct: 232 AHVVGFYIFMSKGASVATVQVGRTGLETLKNIPVNIKEFKPYLILSVPALAKNFKKNIEQ 291
Query: 131 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 190
I + +++++ Y R +G R + +
Sbjct: 292 GIRAQGKNITRLFDFALKVAYIYNGDGREDKG----------------------RGVRFL 329
Query: 191 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
L PL L + +++ K++ G K + GG L + FY AIG+ + GYGL+E++P
Sbjct: 330 LKPLVSLFDHMLFTKVRENFGGQLKFFIGGGALLDKDLQKFYYAIGLPMYQGYGLSEATP 389
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
VI+ P + GS G + ++KI DA+ E LPAG KG + +RG VM GY+KNP +
Sbjct: 390 VISTNGPHRHTFGSSGMLVRPLDLKICDADGKE-LPAGEKGEIVIRGENVMAGYWKNPVS 448
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T + + DGWL TGD+G++ H G+L + GR K ++ S GE P +EE
Sbjct: 449 TAETV-RDGWLYTGDMGYMG--HD--------GLLYVLGRFKSLLIGSDGEKYSPEGIEE 497
Query: 370 AALR-SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD-ASELSKEKTISLL 427
A + SS I Q+++ A++VP+K+ + K L+ + D +S+ +E+ I ++
Sbjct: 498 ALVEHSSCIDQLILYNNQSPYTVALVVPNKDRL---KKHLTHQYLDLSSDKGREEAIRII 554
Query: 428 YGELRKW 434
++ ++
Sbjct: 555 QSQIDRF 561
>gi|258622365|ref|ZP_05717390.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio mimicus VM573]
gi|424807687|ref|ZP_18233095.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio mimicus SX-4]
gi|258585381|gb|EEW10105.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio mimicus VM573]
gi|342325629|gb|EGU21409.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio mimicus SX-4]
Length = 601
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 135/435 (31%), Positives = 207/435 (47%), Gaps = 55/435 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+
Sbjct: 173 EQADFDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQDDVSLCFLPLSHVF 232
Query: 80 ERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ERA ++ +G Y V +++D L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYKGATNCYLHDVSHVRDALGEVRPTVMCAVPRFYEKIFSAIHEKVAKAPFI 292
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
R+V+ F + C + Q+QPS+L L H LA
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQRQPSWL---------------LTQSHQLA 328
Query: 199 EKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ I+
Sbjct: 329 DKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATISCWDDH 388
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
C S+G + ++KI E NE+L VRG VM+GY+K T ++ DE
Sbjct: 389 CFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLEKETAESFDEH 437
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
G+L TGD G I + G L + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 429
QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNELQK 547
Query: 430 ELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFKLLP 562
>gi|449145821|ref|ZP_21776618.1| long-chain-fatty-acid--CoA ligase [Vibrio mimicus CAIM 602]
gi|449078529|gb|EMB49466.1| long-chain-fatty-acid--CoA ligase [Vibrio mimicus CAIM 602]
Length = 601
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 135/435 (31%), Positives = 207/435 (47%), Gaps = 55/435 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+
Sbjct: 173 EQADFDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQDDVSLCFLPLSHVF 232
Query: 80 ERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ERA ++ +G Y V +++D L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYKGATNCYLHDVSHVRDALGEVRPTVMCAVPRFYEKIFSAIHEKVAKAPFI 292
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
R+V+ F + C + Q+QPS+L L H LA
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQRQPSWL---------------LTQSHQLA 328
Query: 199 EKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ I+
Sbjct: 329 DKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATISCWDDH 388
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
C S+G + ++KI E NE+L VRG VM+GY+K T ++ DE
Sbjct: 389 CFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLEKETAESFDEH 437
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
G+L TGD G I + G L + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 429
QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNELQK 547
Query: 430 ELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFKLLP 562
>gi|261211577|ref|ZP_05925865.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. RC341]
gi|260839532|gb|EEX66158.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. RC341]
Length = 601
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 134/435 (30%), Positives = 208/435 (47%), Gaps = 55/435 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+
Sbjct: 173 EQADFDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTEEDVSLCFLPLSHVF 232
Query: 80 ERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ERA ++ +G Y V +++D L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYKGATNCYLHDVSHVRDALGEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLI 292
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
R+V+ F + C + Q+QPS+L L H LA
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQRQPSWL---------------LKQSHQLA 328
Query: 199 EKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 329 DKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDH 388
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
C S+G + ++KI E NE+L VRG VM+GY+K T ++ DE+
Sbjct: 389 CFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLEKETAESFDEN 437
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
G+L TGD G I + G L + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 429
QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNELQK 547
Query: 430 ELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFKLLP 562
>gi|34499506|ref|NP_903721.1| long chain fatty-acid CoA ligase [Chromobacterium violaceum ATCC
12472]
gi|34105356|gb|AAQ61711.1| probable long chain fatty-acid CoA ligase [Chromobacterium
violaceum ATCC 12472]
Length = 587
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 134/444 (30%), Positives = 212/444 (47%), Gaps = 60/444 (13%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGD-KFLSMLPPWHV 78
+ + +DD+ T +YTSGTTG KGVML+H+N+L + + G + LS LP H+
Sbjct: 163 DAVRADDVYTIIYTSGTTGRSKGVMLSHRNVLSTVVATAAFTGLPQGRCRALSFLPLSHI 222
Query: 79 YERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
+ERA ++ G + + +V L L +PH SVP V E ++ + + + A
Sbjct: 223 FERAGVFYYLYSGTGIYFASVECLSSALADVKPHTFSSVPRVLEKVHEKLVGKARDLTGA 282
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQK-QPSYLVALIDWLWARIICAILWPLHLL 197
+R RIY+ + L R + P+ + +D + H L
Sbjct: 283 KR-----------------RIYQ-WALARAENFDPNRRRSPLDAI-----------QHAL 313
Query: 198 AEKLVYKKIQSAIGISKAGVS-GGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 256
A+KLVY K ++A+G ++ G +L + + A G+ V GYG+TESSPVI+A
Sbjct: 314 ADKLVYSKWRAAMGGELISINVGSAALQPRLARMFWAAGIAVAEGYGMTESSPVISANPF 373
Query: 257 TCN--VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
T +GSVG P+ E+++ D G + VRG VM GY+K P T AL
Sbjct: 374 TARGVRIGSVGLPLPGVEVRLAD-----------DGEILVRGDNVMSGYYKEPEQTSDAL 422
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
DGWL+TGDIG + G L + R K+ S G+ + P LE S
Sbjct: 423 -RDGWLHTGDIGVLE-----------DGYLRITDRKKEMFKTSNGKYIAPQALENKLKES 470
Query: 375 SLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRK 433
+ I QI+V+G Q+ A+IVP E++ I + E+S+ K + L+ E+++
Sbjct: 471 AFIDQIMVVGDGQKYAAALIVPLFEKLKEWCAEHGISYTTDCEMSRHPKVVELIDREVKR 530
Query: 434 WTSKCSF--QIGPIHVVDEPFTVN 455
+ I ++D+P+ V+
Sbjct: 531 FNRYFGSWEHIKKFSLLDKPWCVD 554
>gi|375129923|ref|YP_004992022.1| long-chain-fatty-acid--CoA ligase-like protein [Vibrio furnissii
NCTC 11218]
gi|315179096|gb|ADT86010.1| hypothetical long-chain-fatty-acid--CoA ligase-like protein [Vibrio
furnissii NCTC 11218]
Length = 604
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 134/437 (30%), Positives = 205/437 (46%), Gaps = 55/437 (12%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ E DD+ T +YTSGTTG PKGVML + N+ Q+ + D L LP H
Sbjct: 171 RLEQANDDDLFTLIYTSGTTGKPKGVMLDYCNVGAQLEGHDQRLNLSQDDVSLCFLPLSH 230
Query: 78 VYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ERA +++ +G Y V ++D L + +P M +VP YE ++S I +++ +
Sbjct: 231 VFERAWSFYVLYKGATNCYLQDVGQVRDALSQVRPTVMCAVPRFYEKIFSAIHEKVARAP 290
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
R+V+ F ++ C + ++ PS WA C H
Sbjct: 291 LHRKVM--------FTWSVNMGAKMARC-HQEKRTPS---------WALKQC------HQ 326
Query: 197 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LA+KLV K++ +G + GG L I F+ AIG+ V++GYG+TE++ I+
Sbjct: 327 LADKLVLSKLRGLLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATISCWD 386
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
C S+G + ++KI E NE+L VRG VM+GY+K P T Q D
Sbjct: 387 DQCFDPDSIGMTMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETAQTFD 435
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
E G+L TGD G I G L + R K+ + S G+ + P +E A +
Sbjct: 436 EHGFLKTGDAGHIDEQ----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDH 485
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLL 427
+ QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 486 FVEQIAVIADTRKFVSALIVPCFDALEEHAKELNIKYHDRLELLKHSQIIEMFEKRVNEL 545
Query: 428 YGELRKWTSKCSFQIGP 444
L K+ F++ P
Sbjct: 546 QHGLAKFEQVKRFKLLP 562
>gi|340622816|ref|YP_004741268.1| Long-chain acyl-CoA synthetase [Capnocytophaga canimorsus Cc5]
gi|339903082|gb|AEK24161.1| Long-chain acyl-CoA synthetase [Capnocytophaga canimorsus Cc5]
Length = 592
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 206/429 (48%), Gaps = 58/429 (13%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
+ + +DD+AT +YTSGTT PKGVML+H+N++ I + D +P + G + LS LP H++
Sbjct: 168 DNVKADDLATIIYTSGTTARPKGVMLSHRNIISNIINCQDRLPVKRGSRCLSFLPVCHIF 227
Query: 80 ERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ER YF + + + ++ + D+L+ +P M VP + E +Y I + + +
Sbjct: 228 ERMLIYFYQYNCMRIYFAESIEKMGDNLREVKPQMMTVVPRLVEKVYDKIYAKGASLTGF 287
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
+R + + + F Y L W + + +A
Sbjct: 288 KRKIFFWALNLGFDYE--------------------LYGANGWFYQMKLA--------IA 319
Query: 199 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
KLV++K A+G + VSG L + + A G+ + GYGLTE++PVIA R
Sbjct: 320 RKLVFRKWHEALGGELELMVSGSAPLQSRLARIFAAAGLHIVEGYGLTETAPVIAVNREA 379
Query: 258 CNV--LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
+G+VG PIN+ E+KI D G + +G VM GY+K+P T+Q++
Sbjct: 380 GRYWKIGTVGKPINNLEVKIAD-----------DGEILCKGENVMLGYYKDPELTQQSIT 428
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
DG+ +TGDIG + + L + R K+ S G+ + P +E +S
Sbjct: 429 -DGFFHTGDIGELDGEN----------FLKITDRKKEIFKTSGGKYIAPQMIENLLKQSR 477
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGELRKW 434
I Q +V+G+ ++ P A I + E V A+R I + +E++K K + Y ++K
Sbjct: 478 FIEQAMVVGEGEKMPAAFIQINFEFVKEWARRHQIPLSGTYAEMAKNKAV---YDRIQKE 534
Query: 435 TSKCSFQIG 443
K + +G
Sbjct: 535 VHKVNSHLG 543
>gi|383620427|ref|ZP_09946833.1| AMP-dependent synthetase and ligase [Halobiforma lacisalsi AJ5]
gi|448697788|ref|ZP_21698666.1| AMP-dependent synthetase and ligase [Halobiforma lacisalsi AJ5]
gi|445781154|gb|EMA32015.1| AMP-dependent synthetase and ligase [Halobiforma lacisalsi AJ5]
Length = 671
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 131/430 (30%), Positives = 202/430 (46%), Gaps = 80/430 (18%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY-----------DIVPAENGDKFLSML 73
DD+A+ +YTSGTTG PKGV LTH+N + +Y D ++ K +S L
Sbjct: 205 DDLASIIYTSGTTGQPKGVKLTHRNFRANVNQVYRRVGPRPDKGEDTPTIDDDSKMVSYL 264
Query: 74 PPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P HV+ER G+F+ F+ G + Y + L++D QP SVP VYE +Y I++Q
Sbjct: 265 PLAHVFERTAGHFLPFAAGATVAYAESSETLQEDFGAVQPTGATSVPRVYEKIYDAIREQ 324
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
S R+ A T + Y+ R L A +
Sbjct: 325 ATESPIKERIFNWA--------TDVGKEYQ-----RTDDPGPILEAKLS----------- 360
Query: 192 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
+A+KLV+ +++ A+G + + VSGGG+L + Y +G+ + GYGLTE++PV
Sbjct: 361 -----IADKLVFSQVKEALGGNIEMLVSGGGTLSPDLCTLYHGMGLPIFEGYGLTETAPV 415
Query: 251 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP-------AGSKGIVKVRGSQVMQGY 303
+ P +G+VG + E+K+ D V+P G G + V+G V +GY
Sbjct: 416 VTTNPPEEPKIGTVGPAVPGCEVKVDDT----VVPDGEAADTPGETGELLVKGPNVAEGY 471
Query: 304 FKNPSATKQALDED----------------GWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 347
++ P AT +A ED W TGDI I P G +V
Sbjct: 472 WEKPEATDRAFTEDVPASTASGESEDSSSGRWFRTGDIVTIRPD----------GYVVFH 521
Query: 348 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 407
RAK +VLSTG+NV P +E+A + Q +V+G ++ GA+IVP+ + + A+
Sbjct: 522 ERAKQLLVLSTGKNVAPAPIEDAFAAREPVEQCMVVGDGEKFVGALIVPNVDALRRLAEN 581
Query: 408 LSIVHADASE 417
+ D++E
Sbjct: 582 EGVDLPDSAE 591
>gi|343928139|ref|ZP_08767595.1| putative fatty-acid--CoA ligase [Gordonia alkanivorans NBRC 16433]
gi|343761939|dbj|GAA14521.1| putative fatty-acid--CoA ligase [Gordonia alkanivorans NBRC 16433]
Length = 612
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 211/412 (51%), Gaps = 51/412 (12%)
Query: 19 YETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHV 78
++ + +D+AT +YTSGTTG PKGV +TH+N++ ++ +L + + D+ +S LP H+
Sbjct: 172 WQAVEPEDLATLIYTSGTTGPPKGVEITHRNIVAEMAALAEKLDVGFDDRSISYLPAAHI 231
Query: 79 YERACGYFI-FSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
+R + RGI++ R + L P + VP V++ + +GI+ ++ S
Sbjct: 232 ADRVSSHAANLMRGIQITTVPDPREIATALPEVHPTFFFGVPRVWQKIRAGIEAKVAEES 291
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
+ V RAL +F A S A ID + ++ + H
Sbjct: 292 SP---VKRALAGWAFGVGA-----------------STAQARIDGKGSGLLGGV---QHG 328
Query: 197 LAEKLVYKKIQSAIGISK---AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 253
+A+KLV K+++A+G+ + AG SG ++P+ + F+ +G+ + +G++E++ V
Sbjct: 329 IADKLVLHKVRAALGLDEVVFAG-SGAAAIPVEVLKFFLGLGIPILEVWGMSETTGVSTM 387
Query: 254 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 313
P +G+VG PI E+++ D G + VRG VM+GY P T +
Sbjct: 388 TTPDNLKIGTVGPPIRGMEVRLAD-----------DGELLVRGPVVMRGYRNQPEKTAET 436
Query: 314 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA-AL 372
+D DGWL+TGDI I G V++++ R K+ I+ +G+N+ P +E A
Sbjct: 437 IDADGWLSTGDIAKI---------DDDGNVIIVD-RKKELIINESGKNMSPTNIENAMKA 486
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 424
SSLI Q+ IG + A++V D E V + AKRLS+ +AD +ELS I
Sbjct: 487 ASSLIGQVAAIGDSKPYVSALVVLDPEAVAVRAKRLSMPNADLAELSTHPEI 538
>gi|227488400|ref|ZP_03918716.1| possible long-chain-fatty-acid--CoA ligase [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227543012|ref|ZP_03973061.1| possible long-chain-fatty-acid--CoA ligase [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227091614|gb|EEI26926.1| possible long-chain-fatty-acid--CoA ligase [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227181234|gb|EEI62206.1| possible long-chain-fatty-acid--CoA ligase [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 612
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 125/391 (31%), Positives = 191/391 (48%), Gaps = 52/391 (13%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP----AENGDKFLSML 73
+ T SDD+A+ VYTSGTTG PKG MLTH N L Q+ L P A G+ ++ L
Sbjct: 181 RIRTTSSDDLASIVYTSGTTGRPKGCMLTHHNWLAQVLGLL-THPIGQIARPGNSMVTFL 239
Query: 74 PPWHVYERACGY-FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
P HV RA F+ S G + ++ + + +LQR +P+ ++ VP V+E +
Sbjct: 240 PLAHVLARAVSLAFVVSGGTQSHWSNFKTISVELQRNRPNLILGVPRVFEKV-------- 291
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
++AA + R I+ + A + + + PS + +
Sbjct: 292 -RNAAANNALDRGPIQAATFAKAEQVAIDYSKAMDEEDGPSRRLEM-------------- 336
Query: 193 PLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
H + EKL+YKKI+SAIG +SGG ++ + F+ IG+ V GYGLTE +
Sbjct: 337 -QHSIFEKLIYKKIRSAIGGACNYAISGGSAMSHDLLHFFRGIGIPVYEGYGLTEVAAAA 395
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 311
A NV+G+VG P+ +KI D G + +RG Q+ GY++N AT
Sbjct: 396 AVNFGKDNVIGTVGQPVGGMAVKIND-----------DGEICLRGEQLFTGYWQNDIATA 444
Query: 312 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 371
+A D +G+ NTGD+G + G +V+ GR KD IV + G+NV P LE+
Sbjct: 445 EAFDSEGYFNTGDLGELLDT----------GHIVITGRKKDLIVTAGGKNVSPGPLEDKL 494
Query: 372 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL 402
LI Q +V+G + +I D++ +L
Sbjct: 495 RAHPLISQALVVGDGKPFIAVLIALDEDAML 525
>gi|384261959|ref|YP_005417145.1| AMP-dependent synthetase and ligase [Rhodospirillum photometricum
DSM 122]
gi|378403059|emb|CCG08175.1| AMP-dependent synthetase and ligase [Rhodospirillum photometricum
DSM 122]
Length = 607
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 138/433 (31%), Positives = 205/433 (47%), Gaps = 59/433 (13%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP--AENGDKFLSMLPPWHVY 79
I ++D+A ++TSGT G PKGVML+H+ +LH +D++ + + FLS LP H Y
Sbjct: 182 IRANDLAVIIHTSGTGGAPKGVMLSHRAILHNCMGAHDLLATIGLSHEIFLSFLPLSHSY 241
Query: 80 ERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
E G +F G E+ + V L ++ +P M +VP +YE + + + +QI
Sbjct: 242 EHTTGLFFPICLGAEVYFAEGVETLSANMLEARPTIMTAVPRLYEMMRARLLRQIEKEDG 301
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCL-TRNQKQPSYLVALIDWLWARIICAILWPLHL 196
+ K Y+ L +R + P+ L W RI L
Sbjct: 302 FKS----------------KLFYQAVELGSRRLQDPAGL----SWR-ERITDGAL----- 335
Query: 197 LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
+ LV +K+ G KA VSGGG L + LF+ A+GV V GYGLTE++PV++
Sbjct: 336 --DYLVRRKVSQRFGGRLKAMVSGGGPLSPEVGLFFRALGVPVLQGYGLTEAAPVVSCNL 393
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
P +GSVG + E++I G G + VRG VM GY+ +P AT ALD
Sbjct: 394 PCRVKIGSVGPALKDVEVRI-----------GLDGELLVRGPLVMDGYWNDPDATAHALD 442
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
+GWL+TGD+G I G + + R KD IV S G+N+ P +E
Sbjct: 443 GEGWLHTGDVGEI----------DADGDIRITDRKKDIIVNSGGDNISPQRVEGILSLEP 492
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT 435
I Q+VV G A+IVPD+E +L R S + +LS +L L +
Sbjct: 493 EIGQVVVFGDRMPHLVALIVPDREFLL----RWSRETGRSDDLSLAANDPVLRLALARAV 548
Query: 436 SKCSFQIGPIHVV 448
+ + ++ PI V
Sbjct: 549 DRANARLSPIERV 561
>gi|262170570|ref|ZP_06038248.1| long-chain-fatty-acid--CoA ligase [Vibrio mimicus MB-451]
gi|261891646|gb|EEY37632.1| long-chain-fatty-acid--CoA ligase [Vibrio mimicus MB-451]
Length = 601
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 135/435 (31%), Positives = 207/435 (47%), Gaps = 55/435 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+
Sbjct: 173 EQADFDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQDDVSLCFLPLSHVF 232
Query: 80 ERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ERA ++ +G Y V +++D L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYKGATNCYLHDVSHVRDALGEVRPTVMCAVPRFYEKIFSAIHEKVAKAPFI 292
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
R+V+ F + C + Q+QPS+L L H LA
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQRQPSWL---------------LKQNHQLA 328
Query: 199 EKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ I+
Sbjct: 329 DKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATISCWDDH 388
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
C S+G + ++KI E NE+L VRG VM+GY+K T ++ DE
Sbjct: 389 CFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLEKETAESFDEH 437
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
G+L TGD G I + G L + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 429
QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNELQK 547
Query: 430 ELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFKLLP 562
>gi|418529723|ref|ZP_13095655.1| AMP-dependent synthetase and ligase [Comamonas testosteroni ATCC
11996]
gi|371453243|gb|EHN66263.1| AMP-dependent synthetase and ligase [Comamonas testosteroni ATCC
11996]
Length = 649
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 128/396 (32%), Positives = 197/396 (49%), Gaps = 43/396 (10%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
++A VYTSGTTG PKGVMLTH N++ + ++ V A D FLS LP H +ER GY
Sbjct: 216 ELAGIVYTSGTTGKPKGVMLTHDNVVSDLHAVMQRVKAFPEDVFLSFLPLSHTFERTAGY 275
Query: 86 FI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
++ + G + Y +V L D+++ +P +ISVP +YE +Y+ +Q+ + +S ++
Sbjct: 276 YLAVATGSCVAYARSVAQLAQDMKQVRPTVLISVPRIYERVYAKVQESLASSPLKHKLFD 335
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
A+ + ++ FC + L A W A + P LL KLV
Sbjct: 336 EAV----------NKGWKSFCAHQGMHLGEQLDAKASW-------ASVLPGWLL-RKLVA 377
Query: 204 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
+ + + G + VSGG L I + +G+ + GYG+TE++PV++A N
Sbjct: 378 QPLLAQFGGRLRVAVSGGAPLSPTIARTFLGLGLPMVQGYGMTETAPVVSANGLDDNWPD 437
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
+VG + E++I G ++V G VM+GY+ P T +A DGWL T
Sbjct: 438 TVGRVLPGIEVRI-----------GEDQELQVSGPVVMRGYWNRPEDTAKAFTADGWLRT 486
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD I GR R ++GR K+ IV STGE V P ++E+A L L Q+ V
Sbjct: 487 GDQASI----EDGRIR-------IKGRIKEIIVTSTGEKVPPNDVEQAILVDPLFEQVFV 535
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 418
+G+D+ I V + E M A+ + + D S L
Sbjct: 536 VGEDRPFIACIAVVSQMEWEMLARSVGLNPKDGSSL 571
>gi|108805260|ref|YP_645197.1| AMP-dependent synthetase and ligase [Rubrobacter xylanophilus DSM
9941]
gi|108766503|gb|ABG05385.1| AMP-dependent synthetase and ligase [Rubrobacter xylanophilus DSM
9941]
Length = 612
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 122/380 (32%), Positives = 192/380 (50%), Gaps = 49/380 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+D+AT +YTSGT+G KGV+LTH NLL + ++ ++VP + D LS+LP HV ER C
Sbjct: 188 EDVATLIYTSGTSGRQKGVILTHGNLLSNLEAIIEVVPITDDDVGLSILPLSHVLERTCS 247
Query: 85 YFI--FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
F+ G + +V ++++L +P ++ VP ++E +++ I++Q T++ R +
Sbjct: 248 QFLNLVGGGTNYIAESVEKVQENLLEVRPTALLVVPRLFERVFAVIREQ-GTANPVRARI 306
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
+ +R + E L R +L+ L+ L LV
Sbjct: 307 FESAVRTARRKYRHDAGEEAMSLARR---------------------LLFGLYDL---LV 342
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
Y+K+++ +G + VSGG L + F+ GV V GYGLTE+SPVI+ R
Sbjct: 343 YRKVRAGLGGRVRFCVSGGARLEPWLGEFFYGAGVPVAEGYGLTETSPVISVNRFEDLRF 402
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
G+VG P+ + E+++ +G + VRG V GY P A +DG+
Sbjct: 403 GTVGPPLPNVEVRL-----------SGEGEILVRGPSVTPGYHNLPEENAAAFTQDGFFR 451
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGDIG S GG L + RAKD +VL TG+NV P +E A ++ I Q +
Sbjct: 452 TGDIG----------SFDEGGRLKITDRAKDIMVLDTGKNVAPQPVETALANTAHIAQAM 501
Query: 382 VIGQDQRRPGAIIVPDKEEV 401
++G ++ A+IVPD E V
Sbjct: 502 LVGDGRKFVSALIVPDFEAV 521
>gi|148827162|ref|YP_001291915.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittGG]
gi|148718404|gb|ABQ99531.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittGG]
Length = 599
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 126/407 (30%), Positives = 193/407 (47%), Gaps = 47/407 (11%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 178 DLFTIIYTSGTTGEPKGVMLDYANLAHQLETHDLSLNVTDQDISLSFLPFSHIFERAWAA 237
Query: 86 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 238 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 297
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
I + + F L N K +L L LA+KLV
Sbjct: 298 WAISVGQKH---------FDLRANNKAIPFL---------------LKKQFALADKLVLS 333
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ +G K GG L + I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 334 KLRQLLGGRIKMMPCGGAKLELAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 393
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
+G + E+KI E NE+L VRG VM+GY+K P T QA EDG+L TG
Sbjct: 394 IGTLMPKAEVKI--GENNEIL---------VRGGMVMKGYYKKPEETAQAFTEDGFLKTG 442
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 443 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 492
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
++ A+IVP + + AK+L+I + D EL K I ++ +
Sbjct: 493 ADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSDILKMFEQ 539
>gi|347755175|ref|YP_004862739.1| Long-chain acyl-CoA synthetase [Candidatus Chloracidobacterium
thermophilum B]
gi|347587693|gb|AEP12223.1| Long-chain acyl-CoA synthetases (AMP-forming) [Candidatus
Chloracidobacterium thermophilum B]
Length = 618
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 134/411 (32%), Positives = 195/411 (47%), Gaps = 57/411 (13%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNL----LHQIRSLYDIVPAENGDKFLSMLPPWHVYE 80
+D+AT +YTSGTTG+PKGVMLTH NL + + L D+ P D LS LP HVYE
Sbjct: 190 EDLATLIYTSGTTGDPKGVMLTHDNLTFNLVANVERLTDLGPE---DTALSYLPLSHVYE 246
Query: 81 RAC-GYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
R F++S G+ + + +V + +L QP M SVP ++E + + I+++ +
Sbjct: 247 RTVMNVFVYS-GVSVYFAESVDTVAQNLMEVQPTVMTSVPRIFEKILARIEEEGRKAGGL 305
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
+ + + Y+ + ++ G P L D +A
Sbjct: 306 KTKLFTWAMETGREYS--RALHRGNV-------PPMLSLQYDIAYA-------------- 342
Query: 199 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
LV KI++ I K SGG +L + + +G+ + GYGLTE+SPVI +
Sbjct: 343 --LVLSKIRNKIAPRIKFFSSGGAALAEDVMHAFSGMGLTILQGYGLTETSPVITSNTKH 400
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
N G+VG P+ EIKI A E+L RG VM+GY+ P T + L D
Sbjct: 401 ENRPGTVGKPLRGVEIKI--APDGEIL---------TRGRHVMRGYYNKPDKTAEVLTPD 449
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GW +TGDIG I G L + R KD S G+ + P +E A + S I
Sbjct: 450 GWFHTGDIGEI----------DADGFLRITDRKKDLFKTSGGKYIAPQPIENALVTSPHI 499
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
Q VV+G ++ PGA+IVP V A+ L + +A +EL K I Y
Sbjct: 500 TQAVVVGNGRKFPGALIVPTPSSVQNLARELGLTNASYAELLKHPKILDFY 550
>gi|354596150|ref|ZP_09014167.1| Long-chain-fatty-acid--CoA ligase [Brenneria sp. EniD312]
gi|353674085|gb|EHD20118.1| Long-chain-fatty-acid--CoA ligase [Brenneria sp. EniD312]
Length = 607
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 213/438 (48%), Gaps = 54/438 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI-VPAENGDKFLSMLPPWHVYERAC 83
+D+ T +YTSGTTG PKGVML + N+ Q++ L+D+ + D L LP HV+ERA
Sbjct: 187 NDLFTLIYTSGTTGEPKGVMLDYANMAMQLK-LHDLRLRVTETDISLCFLPLSHVFERAW 245
Query: 84 GYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
+FI G + +Y NL + +Q +P M +VP YE +YS I ++ + R+ +
Sbjct: 246 SFFIMHSGAQNVYLNDTNLVRAAMQAVKPTMMCAVPRFYEKVYSAIYEKAAQAPWYRQRL 305
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
+A +R+ F L R K P W R+ +H A++LV
Sbjct: 306 ------FHWAVAQGRRV---FLLRRAGKHPG--------AWRRL-------MHRYADRLV 341
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
K++ +G + + G L +I LF++++G+++ GYG+TE+ ++ L
Sbjct: 342 LGKLRQLLGGQIRFLPAAGARLDDNIILFFQSMGIRIVYGYGMTETCATVSCWEEENFRL 401
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
GS+G P+ E++I G+ ++VRG+ VM+GYF P T A DGWL
Sbjct: 402 GSIGTPLPEIEVRI-----------GADNEIQVRGATVMRGYFHRPQETADAFTADGWLK 450
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD G + G L + R KD + S G+ + P LE + I Q+
Sbjct: 451 TGDAGELDAQ----------GNLFITERLKDLMKTSGGKYIAPQHLEGTLGQDRFIEQVA 500
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYG----ELRKWTSK 437
VI ++ A+IVP E + A+ +++ + D EL + I L+ E++K S+
Sbjct: 501 VIADARKYVSALIVPCFEALEEHARSINLKYHDRLELLRHSHIIELFEQRLREIQKELSR 560
Query: 438 CSFQIGPIHVVDEPFTVN 455
Q+ ++ PF+++
Sbjct: 561 VE-QVKKFTLLPAPFSMD 577
>gi|163802678|ref|ZP_02196569.1| leucine transcriptional activator [Vibrio sp. AND4]
gi|159173566|gb|EDP58386.1| leucine transcriptional activator [Vibrio sp. AND4]
Length = 602
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 131/437 (29%), Positives = 211/437 (48%), Gaps = 55/437 (12%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ E DD+ T +YTSGTTG PKGVML + N+ Q+ + D L LP H
Sbjct: 171 RLEQATEDDLLTLIYTSGTTGQPKGVMLDYANISAQLEGHDQRLSLTEDDVSLCFLPLSH 230
Query: 78 VYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ERA +++ +G Y ++D L +P M +VP YE ++S I +++ +
Sbjct: 231 VFERAWTFYVLYKGGTNCYLQDTMQVRDALSEVRPTVMSAVPRFYEKIFSAIHEKVARAP 290
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
R+++ + + +A + EG ++PS L L +
Sbjct: 291 VHRKIILTWAVNMGAKMSACHQ--EG-------RKPSLL---------------LRKSYA 326
Query: 197 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 327 LADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWD 386
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
C S+G + ++KI D NE+L VRG+ VM+GY+K P T++ D
Sbjct: 387 DQCFDPSSIGMAMPGAQVKIGD--NNEIL---------VRGAMVMRGYYKMPEETEKTFD 435
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
E G+L TGD G+I + G V + + R K+ + S G+ + P +E A +
Sbjct: 436 EHGFLKTGDAGYIDEN---------GNVFITD-RIKELMKTSNGKYIAPQVVEGAIGKDH 485
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLL 427
I QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 486 FIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQIVEMLEKRVNNL 545
Query: 428 YGELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 546 QKELAKFEQVKKFKLLP 562
>gi|159039049|ref|YP_001538302.1| AMP-dependent synthetase and ligase [Salinispora arenicola CNS-205]
gi|157917884|gb|ABV99311.1| AMP-dependent synthetase and ligase [Salinispora arenicola CNS-205]
Length = 599
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 123/387 (31%), Positives = 189/387 (48%), Gaps = 53/387 (13%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDKFLSMLPP 75
+ + +DDIAT VYTSGTTG PKG MLTH+++ + + ++P G L LP
Sbjct: 172 RRAAVRADDIATIVYTSGTTGRPKGCMLTHRSMYADVANAVPVLPNLFGPGASTLLFLPL 231
Query: 76 WHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 134
HV+ R + + + A ++L LQ +P +++SVP V+E +Y+ KQ
Sbjct: 232 AHVFARLIQVGVVQARATMAHCADTKDLIARLQAVRPTFVLSVPRVFEKVYNS-AKQKAE 290
Query: 135 SSAARRVVARA-LIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
+ R+ ARA + I+++ R G L R Q
Sbjct: 291 ADGKGRIFARAEAVAIAYSEALETRTGPGLAL-RVQ------------------------ 325
Query: 194 LHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
H L ++LVY+K+++A+ G + +SGG L + F+ +GV + GYGLTE+SP
Sbjct: 326 -HALFDRLVYRKLRAALGGRCRDAISGGAPLGARLGHFFRGVGVTIYEGYGLTETSPAAC 384
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
A RP +GSVG P+ I+I D +E+L + G V GY++N +A+ +
Sbjct: 385 ANRPGAIRIGSVGRPLPGVNIRIDD--DDEIL---------IAGELVFTGYWRNEAASAE 433
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
L DGW TGD+G + G L + GR K+ IV + G+NV P LE+
Sbjct: 434 VLTPDGWFRTGDLGQL----------DSDGYLNITGRKKEIIVTAGGKNVAPAVLEDQVR 483
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKE 399
L+ Q VV+G Q A++ D+E
Sbjct: 484 AHPLVSQCVVVGDRQPFVAALVTVDEE 510
>gi|375264373|ref|YP_005021816.1| long-chain-fatty-acid-CoA ligase [Vibrio sp. EJY3]
gi|369839697|gb|AEX20841.1| long-chain-fatty-acid-CoA ligase [Vibrio sp. EJY3]
Length = 599
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 128/431 (29%), Positives = 204/431 (47%), Gaps = 55/431 (12%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 83
DD+ T +YTSGTTG PKGVML + N+ Q+ + D L LP HV+ERA
Sbjct: 177 EDDLLTLIYTSGTTGQPKGVMLDYANIAAQLEGHDKRLSLTQDDVSLCFLPLSHVFERAW 236
Query: 84 GYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
+++ +G Y ++D L + +P M +VP YE ++S I +++ + R+++
Sbjct: 237 TFYVLYKGATNCYLKDTAQVRDALSQVRPTVMCAVPRFYEKIFSAIHEKVSRAPIHRKIM 296
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
F + C + ++QPS + L H LA+KLV
Sbjct: 297 --------FTWAVNMGAKMALC-HQEKRQPSIM---------------LRKAHALADKLV 332
Query: 203 YKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
K+++ +G + GG L I F+ A+G+ V++GYG+TE++ ++ C
Sbjct: 333 LSKLRALLGGRINFMPCGGAKLDETIGRFFHAMGINVKLGYGMTETTATVSCWDDYCFDP 392
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
S+G + ++KI NE+L VRG VM+GY+K P T++ DE G+L
Sbjct: 393 DSIGTSMPGAQVKI--GANNEIL---------VRGPMVMRGYYKMPEETEKTFDEHGFLK 441
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD G I + G L + R K+ + S G+ + P +E A + I QI
Sbjct: 442 TGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQMIEGAIGKDHFIEQIA 491
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRK 433
VI ++ A+IVP + + AK L+I + D EL K EK ++ L EL K
Sbjct: 492 VIADTRKFVSALIVPCFDSLEEYAKELNIAYHDRVELIKHHQVVEMLEKRVNELQKELAK 551
Query: 434 WTSKCSFQIGP 444
+ F++ P
Sbjct: 552 FEQVKKFKLLP 562
>gi|86148106|ref|ZP_01066406.1| putative long-chain-fatty-acid-CoA ligase [Vibrio sp. MED222]
gi|85834093|gb|EAQ52251.1| putative long-chain-fatty-acid-CoA ligase [Vibrio sp. MED222]
Length = 602
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 207/430 (48%), Gaps = 55/430 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+ T +YTSGTTG PKGVML + N+ +Q++ + + D L LP HV+ERA
Sbjct: 178 DDLLTLIYTSGTTGQPKGVMLDYTNVGYQLKGHDERLSLSKDDVSLCFLPLSHVFERAWT 237
Query: 85 YFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
+++ +G Y ++D L +P M +VP YE ++S I +++ + R+V+
Sbjct: 238 FYVLYKGATNCYLQDTMQVRDALSDVKPTVMSAVPRFYEKIFSAIHEKVSKAPFIRKVLF 297
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
+ + + + EG + PS++ L H LA+KLV
Sbjct: 298 TWAVNMGAKLSVCHQ--EG-------RTPSFM---------------LKKSHALADKLVL 333
Query: 204 KKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K+++ +G + + GG L I F+ AIG+ V++GYG+TE++ ++ C
Sbjct: 334 SKLRALLGGNINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDRCFNPD 393
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G + E+KI G+K + VRG VM+GY+K P T + DE G+L T
Sbjct: 394 SIGMSMPGAEVKI-----------GAKDEILVRGPMVMRGYYKMPEETAKTFDEHGFLKT 442
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD G + G L + R K+ + S G+ + P +E A + I QI V
Sbjct: 443 GDAGHFDEN----------GNLFITDRIKELMKTSGGKYIAPQVVEGAIGKDHFIEQIAV 492
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 434
I ++ A+IVP + + + AK L+I + D EL K EK ++ L EL K+
Sbjct: 493 IADTRKFVSALIVPCYDSLEVYAKELNIKYHDRVELVKNHQIVEMLEKRVNDLQQELAKF 552
Query: 435 TSKCSFQIGP 444
F++ P
Sbjct: 553 EQVKKFKLLP 562
>gi|423220287|ref|ZP_17206782.1| hypothetical protein HMPREF1061_03555 [Bacteroides caccae
CL03T12C61]
gi|392623364|gb|EIY17467.1| hypothetical protein HMPREF1061_03555 [Bacteroides caccae
CL03T12C61]
Length = 601
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 129/443 (29%), Positives = 210/443 (47%), Gaps = 54/443 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHV 78
E DD+A +YTSGTTG PKGVML H L Q + D + + D ++ LP HV
Sbjct: 175 ERASYDDLANILYTSGTTGEPKGVMLHHSCYLEQFHTHDDRLTTMSDKDVSMNFLPLTHV 234
Query: 79 YERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
+E+A Y +G+++ + +++ ++ +P M SVP +E +Y+G+Q++I ++
Sbjct: 235 FEKAWCYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKINETTG 294
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
++ + I++ RI+ L R + P ++ + + +
Sbjct: 295 LKKALMLDAIKVG-------RIHNLDYLRRGKTPP-------------VMNQLKYKFY-- 332
Query: 198 AEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
EK +Y ++ IGI + G ++P I+ F ++G+ + VGYGLTES+ ++
Sbjct: 333 -EKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVGYGLTESTATVSCTL 391
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
P +GSVG + E+KI E NE+L +RG + +GY+K AT A+D
Sbjct: 392 PVGYDIGSVGVVLPGVEVKI--GEDNEIL---------LRGKTITKGYYKKAEATAAAID 440
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
DGW +TGD G+ G L L R KD S G+ + P LE +
Sbjct: 441 PDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNGKYIAPQALETKLVIDR 489
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT 435
I QI +I ++ A+IVP V AK I + D +EL + I L+ R T
Sbjct: 490 YIDQIAIIADQRKFVSALIVPVYGYVKEYAKEKGIEYKDMAELLQHPKIVGLF-RARIET 548
Query: 436 SKCSF----QIGPIHVVDEPFTV 454
+ F QI ++ EPF++
Sbjct: 549 LQQQFAHYEQIKRFTLLPEPFSM 571
>gi|444424568|ref|ZP_21220024.1| hypothetical protein B878_01444 [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444242274|gb|ELU53789.1| hypothetical protein B878_01444 [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 602
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/437 (29%), Positives = 208/437 (47%), Gaps = 55/437 (12%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ E DD+ T +YTSGTTG PKGVML + N+ Q+ + D L LP H
Sbjct: 171 RLEQAQEDDLLTLIYTSGTTGQPKGVMLDYANISAQLEGHDQRLSLTEDDVSLCFLPLSH 230
Query: 78 VYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ERA +++ +G Y ++D L +P M +VP YE ++S I +++ +
Sbjct: 231 VFERAWTFYVLYKGGTNCYLQDTMQVRDALSEVRPTVMSAVPRFYEKIFSAIHEKVSRAP 290
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
R+++ + + A + EG ++PS + L +
Sbjct: 291 VQRKIMFTWAVNMGAKMAACHQ--EG-------RKPSLM---------------LRKSYA 326
Query: 197 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 327 LADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWD 386
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
C S+G + ++KI E NE+L VRG VM+GY+K P T++ D
Sbjct: 387 DQCFDPSSIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETEKTFD 435
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
E G+L TGD G+I + G L + R K+ + S G+ + P +E A +
Sbjct: 436 EHGFLKTGDAGYIDEN----------GNLFITDRIKELMKTSNGKYIAPQVVEGAIGKDH 485
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLL 427
I QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 486 FIEQIAVIADTRKFVSALIVPCYDSLEQYAKELNIKYHDRVELIKHHQIVEMLEKRVNDL 545
Query: 428 YGELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 546 QKELAKFEQVKKFKLLP 562
>gi|153809226|ref|ZP_01961894.1| hypothetical protein BACCAC_03537 [Bacteroides caccae ATCC 43185]
gi|149128202|gb|EDM19422.1| AMP-binding enzyme [Bacteroides caccae ATCC 43185]
Length = 601
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 129/443 (29%), Positives = 210/443 (47%), Gaps = 54/443 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHV 78
E DD+A +YTSGTTG PKGVML H L Q + D + + D ++ LP HV
Sbjct: 175 ERASYDDLANILYTSGTTGEPKGVMLHHSCYLEQFHTHDDRLTTMSDKDVSMNFLPLTHV 234
Query: 79 YERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
+E+A Y +G+++ + +++ ++ +P M SVP +E +Y+G+Q++I ++
Sbjct: 235 FEKAWCYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKINETTG 294
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
++ + I++ RI+ L R + P ++ + + +
Sbjct: 295 LKKALMLDAIKVG-------RIHNLDYLRRGKTPP-------------VMNQLKYKFY-- 332
Query: 198 AEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
EK +Y ++ IGI + G ++P I+ F ++G+ + VGYGLTES+ ++
Sbjct: 333 -EKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVGYGLTESTATVSCTL 391
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
P +GSVG + E+KI E NE+L +RG + +GY+K AT A+D
Sbjct: 392 PVGYDIGSVGVVLPGVEVKI--GEDNEIL---------LRGKTITKGYYKKTEATAAAID 440
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
DGW +TGD G+ G L L R KD S G+ + P LE +
Sbjct: 441 PDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNGKYIAPQALETKLVIDR 489
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT 435
I QI +I ++ A+IVP V AK I + D +EL + I L+ R T
Sbjct: 490 YIDQIAIIADQRKFVSALIVPVYGYVKEYAKEKGIEYKDMAELLQHPKIVGLF-RARIET 548
Query: 436 SKCSF----QIGPIHVVDEPFTV 454
+ F QI ++ EPF++
Sbjct: 549 LQQQFAHYEQIKRFTLLPEPFSM 571
>gi|332525397|ref|ZP_08401558.1| AMP-dependent synthetase and ligase [Rubrivivax benzoatilyticus
JA2]
gi|332108667|gb|EGJ09891.1| AMP-dependent synthetase and ligase [Rubrivivax benzoatilyticus
JA2]
Length = 582
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 189/365 (51%), Gaps = 47/365 (12%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
++A VYTSGTTG PKGVMLTH+N++ ++++ + D FLS LP H +ER GY
Sbjct: 163 ELAALVYTSGTTGKPKGVMLTHRNVMANVKAVLARIAPRPDDVFLSFLPLSHTFERTAGY 222
Query: 86 FI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
++ + G + + + ++L +D++ +P +ISVP +YE ++ +Q + S+ +R+
Sbjct: 223 YLPIAAGATVAFARSTQHLPEDMKTVRPTVLISVPRIYERVFVKLQTMLEGSALKKRLFE 282
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
A ++R FC + P + A D A++WP LLA + V
Sbjct: 283 MA------QAVGWRR----FCRAQKLPVPGSVPAAWD--------ALVWP--LLASR-VS 321
Query: 204 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
+Q+ G + VSGG +L I + +G+ + GYG+TES+PVI+ P N
Sbjct: 322 APLQAQFGGRLRLAVSGGAALSAPIARCFLGLGLPIVQGYGMTESTPVISCNTPEDNDPA 381
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
+VG P++ E++I D E+L VRG VM+GY+ P T +AL E GWL+T
Sbjct: 382 TVGRPLDGVEVRIGD--NRELL---------VRGPNVMRGYWNRPEDTARAL-EGGWLHT 429
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD ++ GG + + GR K+ IV +TGE + P +LE A + L
Sbjct: 430 GD-----------QASLDGGRIRIVGRVKEIIVTATGEKIAPTDLEMAIVADPLFEAAWA 478
Query: 383 IGQDQ 387
G ++
Sbjct: 479 FGDNR 483
>gi|16271978|ref|NP_438175.1| long chain fatty acid CoA ligase [Haemophilus influenzae Rd KW20]
gi|260580694|ref|ZP_05848521.1| long chain fatty acid CoA ligase [Haemophilus influenzae RdAW]
gi|1170730|sp|P44446.1|LCFH_HAEIN RecName: Full=Putative long-chain-fatty-acid--CoA ligase; AltName:
Full=Long-chain acyl-CoA synthetase; Short=LACS
gi|1572946|gb|AAC21681.1| long chain fatty acid coA ligase, putative [Haemophilus influenzae
Rd KW20]
gi|260092756|gb|EEW76692.1| long chain fatty acid CoA ligase [Haemophilus influenzae RdAW]
Length = 607
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/405 (31%), Positives = 191/405 (47%), Gaps = 47/405 (11%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 186 DLFTIIYTSGTTGEPKGVMLDYANLAHQLETHDLSLNVTDQDISLSFLPFSHIFERAWAA 245
Query: 86 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 246 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 305
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
I + Y F L N K +L L LA+KLV
Sbjct: 306 WAISVGQKY---------FDLRANNKAIPFL---------------LKKQFALADKLVLS 341
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 342 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 401
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
+G + E+KI E NE+L VRG VM+GY+K P T QA EDG+L TG
Sbjct: 402 IGTLMPKAEVKI--GENNEIL---------VRGGMVMKGYYKKPEETAQAFTEDGFLKTG 450
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 451 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 500
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
++ A+IVP + + AK+L+I + D EL K I ++
Sbjct: 501 ADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSDILKMF 545
>gi|337286987|ref|YP_004626460.1| AMP-dependent synthetase and ligase [Thermodesulfatator indicus DSM
15286]
gi|335359815|gb|AEH45496.1| AMP-dependent synthetase and ligase [Thermodesulfatator indicus DSM
15286]
Length = 582
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/421 (30%), Positives = 202/421 (47%), Gaps = 76/421 (18%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+A +YTSGTTG KGVMLTH+N++ + +Y +V G+ LS+LP H E G+
Sbjct: 179 DVAAIIYTSGTTGKAKGVMLTHENIMSDVALIYQVVDLVPGNTILSVLPIHHTLECTGGF 238
Query: 86 FI-FSRGIELMYT---AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
+ G+ + Y R + +DL+ + MI VPL+Y+ + GI+++I + R+
Sbjct: 239 LLPLYAGLNIYYARSLKSREIIEDLRTAKASVMIGVPLLYQKMLEGIERKIKQAPLPRKT 298
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
+ + L+++ + E A K
Sbjct: 299 LFKGLLKVVELAERVGKDEE------------------------------------AAKA 322
Query: 202 VYKKIQSAIGIS--KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR---RP 256
++ K++ G+ K V GG LP + ++ +G+K+ GYGLTE+SPV+ RP
Sbjct: 323 LFAKLREKAGLGHLKYFVCGGAPLPPFVPQKFKRLGIKIIQGYGLTEASPVLTLNPIFRP 382
Query: 257 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 316
SVG PI E+KI + + V G + +G VM+GY+KNP ATK +D+
Sbjct: 383 KAT---SVGVPIPQVEVKIDNPNESGV------GELCFKGPMVMKGYYKNPEATKAVIDD 433
Query: 317 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 376
+G+L+TGD+G++ G + + GRAK+ IV G+NV P E+E R
Sbjct: 434 EGFLHTGDLGYVDEE----------GYVYVCGRAKNVIVTPAGKNVYPEEVEFELDRRPF 483
Query: 377 IRQIVVIGQDQRRPG----AIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELR 432
I + +V G R G A+IVPD EE+ H +LS+E L+ E++
Sbjct: 484 ILESMVYGIPTERGGEEVAAVIVPDYEEIDR--------HFSGKQLSEEDVRDLIAKEVK 535
Query: 433 K 433
+
Sbjct: 536 R 536
>gi|424034170|ref|ZP_17773577.1| AMP-binding enzyme family protein [Vibrio cholerae HENC-01]
gi|408873321|gb|EKM12519.1| AMP-binding enzyme family protein [Vibrio cholerae HENC-01]
Length = 602
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/437 (29%), Positives = 208/437 (47%), Gaps = 55/437 (12%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ E +D+ T +YTSGTTG PKGVML + N+ Q+ + + D L LP H
Sbjct: 171 RLEHAQEEDLLTLIYTSGTTGQPKGVMLDYANISAQLEGHDERLSLTEDDVSLCFLPLSH 230
Query: 78 VYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ERA +++ +G Y ++D L +P M +VP YE ++S I +++ +
Sbjct: 231 VFERAWTFYVLYKGGTNCYLQDTMQVRDALSEVRPTVMSAVPRFYEKIFSAIHEKVSRAP 290
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
R+++ + + A C N+K PS + L +
Sbjct: 291 FHRKIMFTWAVNMGAKMAA--------CHQENRK-PSLM---------------LRKSYA 326
Query: 197 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 327 LADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWD 386
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
C S+G + ++KI E NE+L VRG VM+GY+K P T++ D
Sbjct: 387 DQCFDPSSIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETEKTFD 435
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
E G+L TGD G+I + G L + R K+ + S G+ + P +E A +
Sbjct: 436 EHGFLKTGDAGYIDEN----------GNLFITDRIKELMKTSNGKYIAPQVVEGAIGKDH 485
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLL 427
I QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 486 FIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQIVEMLEKRVNDL 545
Query: 428 YGELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 546 QKELAKFEQVKKFKLLP 562
>gi|384102846|ref|ZP_10003829.1| long-chain-fatty-acid--CoA ligase [Rhodococcus imtechensis RKJ300]
gi|383839515|gb|EID78866.1| long-chain-fatty-acid--CoA ligase [Rhodococcus imtechensis RKJ300]
Length = 599
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 194/384 (50%), Gaps = 56/384 (14%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFLSMLPPWHV 78
++D+A+ VYTSGTTG PKG +LTH+N L ++R+L D+ A G++ L+ LP HV
Sbjct: 176 ANDLASLVYTSGTTGRPKGCILTHRNFLSEVRALLAAPIGDV--ARPGNRVLTFLPLAHV 233
Query: 79 YERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
RA +F G I+ ++ + + +R++P+ ++ VP V+E + G ++ ++
Sbjct: 234 LARAVSLAMFEAGAIQAHWSDFGTVTGEFERFRPNTILGVPRVFEKVRDGAARKASSAGG 293
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
++ + + AY+ ++ PS + L L
Sbjct: 294 LQKRIFDFAEATAVAYSE----------AQDAGGPSLRLRL---------------ERAL 328
Query: 198 AEKLVYKKIQSAIGISKA-GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 256
A+KLVY K+++A+G +SGGG+L + F+ +GV V GYGLTES+ P
Sbjct: 329 ADKLVYAKLRAALGGDCWWAISGGGALMPRLGHFFRGMGVPVYEGYGLTESTAAHCVNVP 388
Query: 257 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 316
+G+VG P++ ++I + G +++RG V GY++N AT++ LD
Sbjct: 389 GVQKIGTVGQPLSGNSVRIAE-----------DGEIELRGGVVFGGYWRNEHATREVLD- 436
Query: 317 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 376
DGW TGD+G + G L + GR KD ++ + G+NV P LE+ +L
Sbjct: 437 DGWFRTGDLGDLDDE----------GYLTITGRKKDLLITAGGKNVSPGPLEDRLRSHTL 486
Query: 377 IRQIVVIGQDQRRPGAIIVPDKEE 400
+ Q VV+G + GA++ D +E
Sbjct: 487 VSQAVVVGDGRPFVGALLTVDPQE 510
>gi|227495094|ref|ZP_03925410.1| possible long-chain-fatty-acid--CoA ligase [Actinomyces coleocanis
DSM 15436]
gi|226831546|gb|EEH63929.1| possible long-chain-fatty-acid--CoA ligase [Actinomyces coleocanis
DSM 15436]
Length = 631
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 128/388 (32%), Positives = 188/388 (48%), Gaps = 71/388 (18%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLS------------ML 73
D+AT VYTSGTTG PKGV LTH N + A+NG K+++ L
Sbjct: 207 DLATVVYTSGTTGKPKGVELTHGNF---------TILAQNGHKWMAEIANHRRSRLLLFL 257
Query: 74 PPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
P HVY R F + G L +T +NL DL+ ++P Y+++VP V E +Y+ ++
Sbjct: 258 PLAHVYARFLEVFQLTGGGVLAHTPDTKNLLHDLESFRPSYLLAVPRVLEKIYNSAEQS- 316
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
+S + R + + AY+ EG T L
Sbjct: 317 -AASGMKLRTFRWAAKTAIAYSRALDTAEGPSKT------------------------LR 351
Query: 193 PLHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
H +A+ LVY+K++ + G K +SGGG L + FY +GV V GYGLTE++ +
Sbjct: 352 AQHQMADALVYRKLKDLLGGHCKYVISGGGPLGERLGHFYRGLGVTVLEGYGLTETTAPL 411
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 311
A P + +G+VG PI+ +KI D T E+L V+G V +GY NP AT
Sbjct: 412 AVNTPRLSKIGTVGPPISTVGVKISD--TGEIL---------VKGPSVFRGYRNNPEATA 460
Query: 312 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 371
+A E+GW TGD+G S G L + GRAK+ +V + G+NV P LE++
Sbjct: 461 EAF-ENGWFKTGDLG----------SLDRDGYLRITGRAKELLVTAGGKNVSPAALEDSL 509
Query: 372 LRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
L+ Q+VV+G + A++ D E
Sbjct: 510 RAHPLVSQVVVVGDKRPFIAALVTLDAE 537
>gi|229524469|ref|ZP_04413874.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae bv. albensis
VL426]
gi|229338050|gb|EEO03067.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae bv. albensis
VL426]
Length = 601
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 131/435 (30%), Positives = 208/435 (47%), Gaps = 55/435 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E DD+ T++YTSGTTG PKGVML ++N+ Q+ + D L LP HV+
Sbjct: 173 EQANYDDLFTFIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVF 232
Query: 80 ERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ERA ++ +G Y V ++++ L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLV 292
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
R+V+ F + C + Q+QPS++ L H A
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------------LKQSHQFA 328
Query: 199 EKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 329 DKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDH 388
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
C S+G + ++KI E NE+L VRG VM+GY+K T ++ DE
Sbjct: 389 CFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLDKETAESFDEH 437
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
G+L TGD G I + G L + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 429
QI VI ++ A+IVP + + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCFDSLEVYAKELNIKYQDRLELLKHSQVLEMFEKRVNDLQK 547
Query: 430 ELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFRLLP 562
>gi|432336080|ref|ZP_19587613.1| long-chain-fatty-acid--CoA ligase [Rhodococcus wratislaviensis IFP
2016]
gi|430776994|gb|ELB92384.1| long-chain-fatty-acid--CoA ligase [Rhodococcus wratislaviensis IFP
2016]
Length = 599
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 194/384 (50%), Gaps = 56/384 (14%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFLSMLPPWHV 78
++D+A+ VYTSGTTG PKG +LTH+N L ++R+L D+ A G++ L+ LP HV
Sbjct: 176 ANDLASLVYTSGTTGRPKGCILTHRNFLSEVRALLAAPIGDV--ARPGNRVLTFLPLAHV 233
Query: 79 YERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
RA +F G I+ ++ + + +R++P+ ++ VP V+E + G ++ ++
Sbjct: 234 LARAVSLAMFEAGAIQAHWSDFGTVTGEFERFRPNAILGVPRVFEKVRDGAARKASSAGG 293
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
++ + + AY+ ++ PS + L L
Sbjct: 294 LQKRIFDFAEATAVAYSE----------AQDAGGPSLRLRL---------------ERAL 328
Query: 198 AEKLVYKKIQSAIGISKA-GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 256
A+KLVY K+++A+G +SGGG+L + F+ +GV V GYGLTES+ P
Sbjct: 329 ADKLVYAKLRAALGGDCWWAISGGGALMPRLGHFFRGMGVPVYEGYGLTESTAAHCVNVP 388
Query: 257 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 316
+G+VG P++ ++I + G +++RG V GY++N AT++ LD
Sbjct: 389 GVQKIGTVGQPLSGNSVRIAE-----------DGEIELRGGVVFGGYWRNEHATREVLD- 436
Query: 317 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 376
DGW TGD+G + G L + GR KD ++ + G+NV P LE+ +L
Sbjct: 437 DGWFRTGDLGDLDDE----------GYLTITGRKKDLLITAGGKNVSPGPLEDRLRSHTL 486
Query: 377 IRQIVVIGQDQRRPGAIIVPDKEE 400
+ Q VV+G + GA++ D +E
Sbjct: 487 VSQAVVVGDGRPFVGALLTVDPQE 510
>gi|264678464|ref|YP_003278371.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni CNB-2]
gi|262208977|gb|ACY33075.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni CNB-2]
Length = 649
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 213/434 (49%), Gaps = 43/434 (9%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
++A VYTSGTTG PKGVMLTH N++ + ++ V A D FLS LP H +ER GY
Sbjct: 216 ELAGIVYTSGTTGKPKGVMLTHDNVVSDLHAVMQRVKAFPEDVFLSFLPLSHTFERTAGY 275
Query: 86 FI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
++ + G + Y +V L D+++ +P +ISVP +YE +Y+ +Q+ + +S ++
Sbjct: 276 YLAVATGSCVAYARSVAQLAQDMKQVKPTVLISVPRIYERVYAKVQESLASSPFKHKLFD 335
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
A+ + ++ A + + G + + + S+ AL WL +++ L L +L
Sbjct: 336 AAVNKGWKSFCAHQGMPLG---EQPEAKASWASALPGWLLRKLVAQPL--LAQFGGRL-- 388
Query: 204 KKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
+ VSGG L I + +G+ + GYG+TE++PV++A N +
Sbjct: 389 ----------RVAVSGGAPLSPTIARTFLGLGLPMVQGYGMTETAPVVSANGLDDNWPDT 438
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
VG + E++I D + ++V G VM+GY+ P T +A DGWL TG
Sbjct: 439 VGRVLPGIEVRIGDDQE-----------LQVSGQVVMRGYWNRPEDTAKAFTADGWLRTG 487
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D I GR R ++GR K+ IV STGE V P ++E+A L L Q+ V+
Sbjct: 488 DQASI----ENGRIR-------IKGRIKEIIVTSTGEKVPPNDVEQAILVDPLFEQVFVV 536
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIG 443
G+D+ I V + E M A+ + + D S L + + T +
Sbjct: 537 GEDRPFIACIAVVGQVEWEMLARSVGLNPNDVSSLQHAAAEREALARIERQTRSFARYAV 596
Query: 444 P--IHVVDEPFTVN 455
P IH+V + + ++
Sbjct: 597 PRAIHLVRDSWNID 610
>gi|42524534|ref|NP_969914.1| long-chain fatty-acid-CoA ligase [Bdellovibrio bacteriovorus HD100]
gi|39576743|emb|CAE80907.1| long-chain fatty-acid-CoA ligase [Bdellovibrio bacteriovorus HD100]
Length = 593
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/430 (30%), Positives = 205/430 (47%), Gaps = 52/430 (12%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 80
++ +DIAT +YTSGTTG PKGV++TH + ++ + + A D LS LP H+
Sbjct: 173 SLTQEDIATILYTSGTTGRPKGVVMTHLQAISEVSEAFPLCGATEADTSLSFLPYAHILG 232
Query: 81 RACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
R + G L + ++ ++ +L +P +MISVP ++E +Y+ + QI T
Sbjct: 233 RIEHWGHAYIGFTLAFAESLEKIRGNLTEVRPTFMISVPRIFEKIYAAVIAQIQTQPLKM 292
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+V AL I +K + +++ L + LA+
Sbjct: 293 KVFNWAL-EIGTKVGEYK------------------------MSGQVLPLDLLVKYELAK 327
Query: 200 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
KLV KI +A G + +SGG +P I LF+ A G+ + GYGLTE++ + P
Sbjct: 328 KLVLDKIPTAFGGRLRFAISGGAPIPREIALFFHAAGILILEGYGLTETTAAVTVNTPFN 387
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
GSVG PI ++KI AE E+L V+ +VM+ Y+KNP ATK+A DG
Sbjct: 388 YKFGSVGRPIGEVKLKI--AEDGEIL---------VKSDKVMKEYYKNPEATKEAFT-DG 435
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
W +TGDIG I P GG L + R KD I + G+ V P LE S I
Sbjct: 436 WFHTGDIGEILP----------GGDLKITDRKKDLIKTAGGKYVAPQRLEGLLSLSPYIA 485
Query: 379 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKC 438
++V G ++ A++ D+ V AK + ++D + L + + L +RK ++
Sbjct: 486 NVLVHGDQRKYIVALVTLDRPTVENLAKEKQVSYSDWNSLVQSPFVQDL---IRKAVAET 542
Query: 439 SFQIGPIHVV 448
+ Q+ +
Sbjct: 543 NSQLASFESI 552
>gi|344343202|ref|ZP_08774071.1| Long-chain-fatty-acid--CoA ligase [Marichromatium purpuratum 984]
gi|343805133|gb|EGV23030.1| Long-chain-fatty-acid--CoA ligase [Marichromatium purpuratum 984]
Length = 649
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 132/377 (35%), Positives = 186/377 (49%), Gaps = 50/377 (13%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
D +AT VYTSGTTG PKGVML+H+N+L + D FLS LP H+ ER
Sbjct: 228 DALATIVYTSGTTGRPKGVMLSHRNILSNAHGALTQIDVYGEDVFLSFLPLSHMLERTGS 287
Query: 85 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y++ G + Y ++ L +DLQ +P MI+VP V+E +Y I Q+ R
Sbjct: 288 YYLPMMAGSRVAYARSIGQLAEDLQTIRPTAMIAVPRVFERVYQRILDQL----DKRPKP 343
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
AR L + A A R +E R Q + + WL ++WP LL K+
Sbjct: 344 ARWLFNAAVA--AGWRTFE-----REQGRAGWH----PWL-------LVWP--LLRRKVA 383
Query: 203 YKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
Q G +A VSGG L + + +GV + GYGLTE+SPVI+ N+
Sbjct: 384 LPVQQRLGGRLRATVSGGAPLSTEVARTFIGLGVPLLQGYGLTETSPVISFNTLQSNIPA 443
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
SVG P+ +++I G + + VRG M GY+ N +AT + L +DGWL+T
Sbjct: 444 SVGVPLRGLQVRI-----------GPESELLVRGDNTMLGYWNNHAATAKMLAQDGWLHT 492
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD I +H + + GR KD +VLS GE V P ++E A L Q+VV
Sbjct: 493 GDQARIEDNH-----------IYITGRIKDILVLSNGEKVPPGDMELAIALDPLFDQVVV 541
Query: 383 IGQDQRRPGAIIV--PD 397
+G+ Q A++V PD
Sbjct: 542 LGEGQSYLSALLVLNPD 558
>gi|407783917|ref|ZP_11131108.1| AMP-dependent synthetase and ligase [Oceanibaculum indicum P24]
gi|407199170|gb|EKE69192.1| AMP-dependent synthetase and ligase [Oceanibaculum indicum P24]
Length = 602
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 134/439 (30%), Positives = 215/439 (48%), Gaps = 58/439 (13%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAEN-GDK-FLSMLPPWHVYERA 82
DD+A +YTSGT G PKGVML+H+ + + S +D++ GD+ FLS LP H YE
Sbjct: 182 DDLACLIYTSGTGGAPKGVMLSHRAIFCNLVSAFDLLHEFGLGDEVFLSFLPLSHSYEHT 241
Query: 83 CG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
CG +F S G ++ Y L +LQ +P M +VP +YE L+ I + + +R
Sbjct: 242 CGLFFPISIGAQIYYAEGADTLAANLQEAKPTIMTAVPRLYEVLHGRILAGVERAGGKKR 301
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+ + + KRI + L+ +K +LL +
Sbjct: 302 DLFMKALEL-----GRKRIEQPGSLSLGEKA----------------------FNLLLDL 334
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LV +K++ +G KA +SGG L + +F+ A+G+++ GYG TE++PV++ RP
Sbjct: 335 LVRRKVRQRMGGRLKAFISGGAPLNYEVGMFFLALGIRLCQGYGQTEAAPVVSCNRPRRI 394
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
+ +VG P+ E+++ A E+L VRG +M GY+ +P AT++AL DGW
Sbjct: 395 RIETVGPPLKGVEVRL--APDGEIL---------VRGELLMDGYWDDPEATEKAL-IDGW 442
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
L+TGDIG I P G + + R +D IV+S G+N+ P +E I Q
Sbjct: 443 LHTGDIGEIDPD----------GYIRITDRKRDIIVISGGDNISPQRVEGFVTLQPEINQ 492
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCS 439
+V G + +IVP ++ V AK V + +EL+ +K GE+ ++
Sbjct: 493 AMVYGDKRPYLVGLIVPAQDFVESYAKGKG-VAPNLAELAGDKDFRAAIGEVLDRVNRDL 551
Query: 440 FQIGPIH---VVDEPFTVN 455
+ + + EPFT +
Sbjct: 552 SSLEKVRRFVIATEPFTTD 570
>gi|419963959|ref|ZP_14479919.1| long-chain-fatty-acid--CoA ligase [Rhodococcus opacus M213]
gi|414570495|gb|EKT81228.1| long-chain-fatty-acid--CoA ligase [Rhodococcus opacus M213]
Length = 599
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 194/384 (50%), Gaps = 56/384 (14%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFLSMLPPWHV 78
++D+A+ VYTSGTTG PKG +LTH+N L ++R+L D+ A G++ L+ LP HV
Sbjct: 176 ANDLASLVYTSGTTGRPKGCILTHRNFLSEVRALLAAPIGDV--ARPGNRVLTFLPLAHV 233
Query: 79 YERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
RA +F G I+ ++ + + +R++P+ ++ VP V+E + G ++ ++
Sbjct: 234 LARAVSLAMFEAGAIQAHWSDFGTVTGEFERFRPNTILGVPRVFEKVRDGAARKASSAGG 293
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
++ + + AY+ ++ PS + L L
Sbjct: 294 LQKRIFDFAEATAVAYSE----------AQDAGGPSLRLRL---------------ERAL 328
Query: 198 AEKLVYKKIQSAIGISKA-GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 256
A+KLVY K+++A+G +SGGG+L + F+ +GV V GYGLTES+ P
Sbjct: 329 ADKLVYAKLRAALGGDCWWAISGGGALMPRLGHFFRGMGVPVYEGYGLTESTAAHCVNVP 388
Query: 257 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 316
+G+VG P++ ++I + G +++RG V GY++N AT++ LD
Sbjct: 389 GVQKIGTVGQPLSGNSVRIAE-----------DGEIELRGGVVFGGYWRNEHATREVLD- 436
Query: 317 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 376
DGW TGD+G + G L + GR KD ++ + G+NV P LE+ +L
Sbjct: 437 DGWFRTGDLGDLDDE----------GYLTITGRKKDLLITAGGKNVSPGPLEDRLRSHTL 486
Query: 377 IRQIVVIGQDQRRPGAIIVPDKEE 400
+ Q VV+G + GA++ D +E
Sbjct: 487 VSQAVVVGDGRPFVGALLTVDPQE 510
>gi|238760082|ref|ZP_04621232.1| long-chain-fatty-acid--CoA ligase [Yersinia aldovae ATCC 35236]
gi|238701701|gb|EEP94268.1| long-chain-fatty-acid--CoA ligase [Yersinia aldovae ATCC 35236]
Length = 599
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 216/445 (48%), Gaps = 54/445 (12%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ E+ DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP H
Sbjct: 173 RIESCDLDDLFTLIYTSGTTGEPKGVMLDYRNMAAQLYLHDQRLTLTAQDVSLCFLPLSH 232
Query: 78 VYERACGYFIFSRGIELMYTAVRN---LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 134
V+ERA ++ G + +Y +R+ ++ +Q +P M +VP YE ++S I ++
Sbjct: 233 VFERAWSCYVMHTGAQNVY--IRDTDWVRPAMQAVKPTVMCAVPRFYEKVFSAINDKVAL 290
Query: 135 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 194
+ RR++ R +A +R ++ CL R QK PS L L+
Sbjct: 291 AKWHRRMLFR------WAVGRGERKFQ--CLQRGQK-PSLLSGLV--------------- 326
Query: 195 HLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 253
H LA++LV K+++ +G + + G L +I LF++AIGV ++ GYG+TE+ ++
Sbjct: 327 HKLADRLVLSKLRAVLGGRVRFLPAAGARLDDNIILFFQAIGVNIKYGYGMTETCATVSC 386
Query: 254 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 313
GS+G P+ ++++ G++ ++VRG VM+GYF P T ++
Sbjct: 387 WEENDFRFGSIGKPLPGIDVRL-----------GAENEIQVRGPIVMRGYFNKPQETAES 435
Query: 314 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 373
+DGWL TGD G + G L + R KD + S G+ + P LE +
Sbjct: 436 FTDDGWLKTGDAGVLDAQ----------GNLFITERLKDLMKTSGGKYIAPQMLEGTLGQ 485
Query: 374 SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGELR 432
I QI VI ++ A+IVP E + A+ +++ H+ L +SL L+
Sbjct: 486 DRFIEQIAVIADTRKFVSALIVPCFESLEEYARSINLKYHSRLELLRHSHIVSLFEQRLK 545
Query: 433 KWTSKCSF--QIGPIHVVDEPFTVN 455
+ + + Q+ ++ + FT+
Sbjct: 546 EMQKELALFEQVKRFTLLPQAFTME 570
>gi|121594394|ref|YP_986290.1| AMP-dependent synthetase and ligase [Acidovorax sp. JS42]
gi|120606474|gb|ABM42214.1| AMP-dependent synthetase and ligase [Acidovorax sp. JS42]
Length = 609
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 132/438 (30%), Positives = 209/438 (47%), Gaps = 46/438 (10%)
Query: 23 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERA 82
G +D+A VYTSGTTG PKGVML+H N++ ++++ + + D FLS LP H +ER
Sbjct: 183 GPEDLAAIVYTSGTTGKPKGVMLSHANVVADVKAVLERIAPTPQDVFLSFLPLSHTFERT 242
Query: 83 CGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
GY++ + G ++Y +V L +DL+ +P ++SVP +YE +++ + + + S
Sbjct: 243 GGYYLPMASGSCVVYARSVAQLAEDLKNVRPTVLVSVPRIYERVHAKLIETLSPSP---- 298
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+++ A ++ FC + P A W R A+ WP L
Sbjct: 299 ------LKMQLFQAAQAVGWKRFCAAQRLPAPQDDGA---GGWMR---ALPWP---LLRA 343
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LV K + + G + VSGG L I + +G+++ GYG+TE+SPV++ N
Sbjct: 344 LVAKPLLAQFGGRVRVAVSGGAPLSPTIAHCFLGLGLQLVQGYGMTETSPVVSVNTLEDN 403
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
+VG + E++I G ++VRG VM+GY+K P T + + DGW
Sbjct: 404 DPSTVGRALPGVEVRI-----------GENRELQVRGPIVMKGYWKRPEDTARTVSADGW 452
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
L TGD I GR R + GR K+ IV STGE V P +LE A +L Q
Sbjct: 453 LGTGDQAEIV----DGRIR-------ILGRIKEIIVTSTGEKVPPADLELAITADALFEQ 501
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCS 439
V+G+ + + V EE A +L + D + L+ + K +
Sbjct: 502 AFVVGEQRPFIACVAVVHAEEWRQLAGQLGLDANDPASLAHPSAQRAALARIEKLAAGFP 561
Query: 440 FQIGP--IHVVDEPFTVN 455
P +H+V EP+T+
Sbjct: 562 RYAVPRAVHLVREPWTIE 579
>gi|388600371|ref|ZP_10158767.1| hypothetical protein VcamD_10774 [Vibrio campbellii DS40M4]
Length = 602
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/437 (29%), Positives = 209/437 (47%), Gaps = 55/437 (12%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ E DD+ T +YTSGTTG PKGVML + N+ Q+ + D L LP H
Sbjct: 171 RLEQAQEDDLLTLIYTSGTTGQPKGVMLDYANISAQLEGHDQRLSLTEDDVSLCFLPLSH 230
Query: 78 VYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ERA +++ +G Y ++D L +P M +VP YE ++S I +++ +
Sbjct: 231 VFERAWTFYVLYKGGTNCYLQDTMQVRDALSEVRPTVMSAVPRFYEKIFSAIHEKVSRAP 290
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
R+++ + + A + EG ++PS + L +
Sbjct: 291 VHRKIMFTWAVNMGAKMAACHQ--EG-------RKPSLM---------------LRKSYA 326
Query: 197 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 327 LADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWD 386
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
C S+G + ++KI E+NE+L VRG VM+GY+K P T++ D
Sbjct: 387 DQCFDPSSIGMAMPGVQVKI--GESNEIL---------VRGPMVMRGYYKMPEETEKTFD 435
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
E G+L TGD G+I + G L + R K+ + S G+ + P +E A +
Sbjct: 436 EHGFLKTGDAGYIDEN----------GNLFITDRIKELMKTSNGKYIAPQVVEGAIGKDH 485
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLL 427
I QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 486 FIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQIVEMLEKRVNDL 545
Query: 428 YGELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 546 QKELAKFEQVKKFKLLP 562
>gi|258625340|ref|ZP_05720239.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio mimicus VM603]
gi|258582381|gb|EEW07231.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio mimicus VM603]
Length = 601
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 135/435 (31%), Positives = 206/435 (47%), Gaps = 55/435 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+
Sbjct: 173 EQADFDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQDDVSLCFLPLSHVF 232
Query: 80 ERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ERA ++ +G Y V +++D L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYKGATNCYLHDVSHVRDALGEVRPTVMCAVPRFYEKIFSAIHEKVAKAPFI 292
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
R+V+ F + C + Q+QPS+L L H LA
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQRQPSWL---------------LKQNHQLA 328
Query: 199 EKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ I+
Sbjct: 329 DKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATISCWDDH 388
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
C S+G + ++KI E NE+L VRG VM+GY+K T + DE
Sbjct: 389 CFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLEKETADSFDEH 437
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
G+L TGD G I + G L + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 429
QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNELQK 547
Query: 430 ELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFKLLP 562
>gi|312139004|ref|YP_004006340.1| acyl-CoA ligase/synthetase [Rhodococcus equi 103S]
gi|311888343|emb|CBH47655.1| putative acyl-CoA ligase/synthetase [Rhodococcus equi 103S]
Length = 597
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/385 (30%), Positives = 198/385 (51%), Gaps = 56/385 (14%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR-----SLYDIVPAENGDKFLSMLPPW 76
+ +DD+A+ VYTSGTTG PKG +LTH+N L ++R S+ ++ A G++ L+ LP
Sbjct: 172 VSADDLASLVYTSGTTGRPKGCILTHRNFLSEVRGILVASIGEV--ARPGNRMLTFLPLA 229
Query: 77 HVYERACGYFIF-SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 135
HV RA +F + GI+ ++ + + +R++P+ ++ VP V+E ++ S
Sbjct: 230 HVLARAVSLAMFEAGGIQAHWSNFGTVAEQFERFRPNVILGVPRVFE--------KVRDS 281
Query: 136 SAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLH 195
+A + R +FA+ I + + + PS+L L AR H
Sbjct: 282 AAHTASKGGPIARAAFAFAESTAIE--YSESLDAGGPSFL------LKAR---------H 324
Query: 196 LLAEKLVYKKIQSAIGISK-AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
LA++LV++K+++A+G +SGGG+L + F+ G+ + GYGLTES+
Sbjct: 325 ALADRLVFRKLRAAMGDECWWAISGGGALMPRLGHFFRGAGIPIFEGYGLTESTAAHCVN 384
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
P +G+VG P++ ++I + G +++ G V GY++N AT
Sbjct: 385 VPGEQKIGTVGRPMSGNSVRIA-----------ADGEIELAGGVVFGGYWRNEEATVDVF 433
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
D DGW+ TGD+G + G L+L GR KD +V + G+NV P LE+ +
Sbjct: 434 D-DGWMRTGDLGELDDD----------GYLILTGRKKDLLVTAGGKNVSPGPLEDRLRSN 482
Query: 375 SLIRQIVVIGQDQRRPGAIIVPDKE 399
+LI Q VV+G + GA++ D E
Sbjct: 483 ALISQAVVVGDGRPFIGALLTLDPE 507
>gi|148263653|ref|YP_001230359.1| AMP-dependent synthetase and ligase [Geobacter uraniireducens Rf4]
gi|146397153|gb|ABQ25786.1| AMP-dependent synthetase and ligase [Geobacter uraniireducens Rf4]
Length = 603
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/403 (31%), Positives = 196/403 (48%), Gaps = 51/403 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ-IRSLYDIVPAENGDKFLSMLPPWHV 78
+ IG D+ T +YTSGTTG PKGV LTH+N+L + V + LS LP HV
Sbjct: 176 DCIGPTDLLTLIYTSGTTGVPKGVPLTHRNILFDAFYTSRKAVVLRECEVHLSFLPLSHV 235
Query: 79 YERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
ER GY++ +M A + + +++ +P M+SVP ++E +YS I + + S
Sbjct: 236 LERTIGYYMMIMNGSMMAFADSIEKVPENMMEVKPTVMVSVPRLFEKIYSRIFENVHQMS 295
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
+R + I + Y + I +K+ S L+A +
Sbjct: 296 VVKRKLFHWAIEVGKKYVEARYI---------EKRTSPLLAF---------------KYN 331
Query: 197 LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
+A++LV+ K++ G + + SGG L I+ F+ IG+ + GYGLTE+SP ++
Sbjct: 332 VADRLVFGKLRERFGGNMRLFCSGGAPLDKTINEFFWIIGLPILEGYGLTETSPAVSFNN 391
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
GSVG + HTEIK AE E+L +RG Q+M GY+K P+AT ++L
Sbjct: 392 FDQVRFGSVGTALEHTEIKT--AEDGELL---------IRGPQIMTGYYKEPAATGESL- 439
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
+DGW TGDIG+I G + + R K+ I+ + G+N+ P LE
Sbjct: 440 QDGWFKTGDIGYIE-----------NGFVYITDRKKELIITAGGKNIAPQPLENELKLDK 488
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 418
I V G + A++VP+ E +L A+ I + D +L
Sbjct: 489 YISSAFVYGDRKPYLTALLVPNMERLLEFAREKHIDYYDMDDL 531
>gi|325673718|ref|ZP_08153409.1| long-chain-fatty-acid--CoA ligase [Rhodococcus equi ATCC 33707]
gi|325555739|gb|EGD25410.1| long-chain-fatty-acid--CoA ligase [Rhodococcus equi ATCC 33707]
Length = 602
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/386 (31%), Positives = 199/386 (51%), Gaps = 58/386 (15%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR-----SLYDIVPAENGDKFLSMLPPW 76
+ +DD+A+ VYTSGTTG PKG +LTH+N L ++R S+ ++ A G++ L+ LP
Sbjct: 177 VSADDLASLVYTSGTTGRPKGCILTHRNFLSEVRGILVASIGEV--ARPGNRMLTFLPLA 234
Query: 77 HVYERACGYFIF-SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 135
HV RA +F + G + ++ + + +R++P+ ++ VP V+E ++ S
Sbjct: 235 HVLARAVSLAMFEAGGTQAHWSNFGTVAEQFERFRPNVILGVPRVFE--------KVRDS 286
Query: 136 SAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLH 195
+A + R +FA+ I + + + PS+L L AR H
Sbjct: 287 AAHTASKGGPIARAAFAFAESTAIE--YSESLDAGGPSFL------LKAR---------H 329
Query: 196 LLAEKLVYKKIQSAIGISK-AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
LA++LV++K+++A+G +SGGG+L + F+ G+ + GYGLTES+
Sbjct: 330 ALADRLVFRKLRAAMGDECWWAISGGGALMPRLGHFFRGAGIPIFEGYGLTESTAAHCVN 389
Query: 255 RPTCNVLGSVGHPINHTEIKI-VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 313
P +G+VG P++ ++I VD E +++ G V GY++N AT
Sbjct: 390 VPGEQKIGTVGRPMSGNSVRIAVDGE------------IELAGGVVFGGYWRNEEATADV 437
Query: 314 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 373
D DGW+ TGD+G + G L+L GR KD +V ++G+NV P LE+
Sbjct: 438 FD-DGWMRTGDLGELDDD----------GYLILTGRKKDLLVTASGKNVSPGPLEDRLRS 486
Query: 374 SSLIRQIVVIGQDQRRPGAIIVPDKE 399
++LI Q VV+G + GA++ D E
Sbjct: 487 NALISQAVVVGDGRPFIGALLTLDPE 512
>gi|448388126|ref|ZP_21565066.1| AMP-dependent synthetase and ligase [Haloterrigena salina JCM
13891]
gi|445670777|gb|ELZ23374.1| AMP-dependent synthetase and ligase [Haloterrigena salina JCM
13891]
Length = 652
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 135/422 (31%), Positives = 206/422 (48%), Gaps = 62/422 (14%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL---LHQIRSLY-------DIVPAENGD 67
+ + + DD+A+ +YTSGTTG PKGV LTH N ++ IR + D VP + +
Sbjct: 199 RLDAVELDDLASLIYTSGTTGQPKGVRLTHWNFRSNVNAIRKRFARRPDRDDDVPTLDEE 258
Query: 68 KF-LSMLPPWHVYERACGYFI-FSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETL 124
+S LP HV+ER G+F+ F+ G + Y + L++D P SVP VYE +
Sbjct: 259 SLAMSYLPLAHVFERTAGHFVLFASGSCIAYAENPDTLQEDFSIVGPTTATSVPRVYEKI 318
Query: 125 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 184
Y GI++Q + S A++ + + AY + P L
Sbjct: 319 YDGIREQA-SESGAKQTIFEWATDVGVAY-------------QQADSPGPL--------- 355
Query: 185 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 243
L +A+KLV+ ++ A+G + +SGGGSL + Y A+G+ + GYG
Sbjct: 356 ------LRAKQAIADKLVFSTVREALGGNIDLLISGGGSLSPELCRLYHAMGLPIFEGYG 409
Query: 244 LTESSPVIAARRPTCNVLGSVGHPINHTEIKI----VDAETNEVLPAGSKGIVKVRGSQV 299
LTE+SPV+A P +G++G +++ +++I D E + P G G + V G V
Sbjct: 410 LTETSPVVATNPPDAAKIGTIGPAVSNVDLRIDETVADQEAFDDDP-GKVGELLVAGPSV 468
Query: 300 MQGYFKNPSATKQALDE--DG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIV 355
+GY+ P AT+ A E DG W TGDI RR G L R K IV
Sbjct: 469 TEGYWNRPGATQGAFTEGDDGTQWFRTGDI----------VHRRPDGYLEFRDRLKQIIV 518
Query: 356 LSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADA 415
LSTG+NV P +E+A S ++ Q +V+G ++ GA++VP+ + A I +D
Sbjct: 519 LSTGKNVAPGPIEDAFAASEIVEQAMVVGDGEKFIGALLVPNTTHIREWADEEGIDLSDD 578
Query: 416 SE 417
E
Sbjct: 579 LE 580
>gi|145629146|ref|ZP_01784945.1| long chain fatty acid CoA ligase [Haemophilus influenzae 22.1-21]
gi|145633445|ref|ZP_01789175.1| long chain fatty acid CoA ligase [Haemophilus influenzae 3655]
gi|145639710|ref|ZP_01795313.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittII]
gi|148825717|ref|YP_001290470.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittEE]
gi|144978649|gb|EDJ88372.1| long chain fatty acid CoA ligase [Haemophilus influenzae 22.1-21]
gi|144986008|gb|EDJ92610.1| long chain fatty acid CoA ligase [Haemophilus influenzae 3655]
gi|145271267|gb|EDK11181.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittII]
gi|148715877|gb|ABQ98087.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittEE]
Length = 599
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/409 (31%), Positives = 194/409 (47%), Gaps = 48/409 (11%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 178 DLFTIIYTSGTTGEPKGVMLDYANLAHQLETHDLSLNVTDQDISLSFLPFSHIFERAWAA 237
Query: 86 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 238 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 297
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
I + + F L N K +L L LA+KLV
Sbjct: 298 WAISVGQKH---------FDLRANNKAIPFL---------------LKKQFALADKLVLS 333
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 334 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 393
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
+G + E+KI E NE+L VRG VM+GY+K P T QA EDG+L TG
Sbjct: 394 IGTLMPKAEVKI--GENNEIL---------VRGGMVMKGYYKKPEETAQAFTEDGFLKTG 442
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 443 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 492
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELR 432
++ A+IVP + + AK+L+I + D EL K I ++ ELR
Sbjct: 493 ADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSDILKMF-ELR 540
>gi|309750679|gb|ADO80663.1| Probable long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoA
synthetase) (LACS) [Haemophilus influenzae R2866]
Length = 607
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/409 (31%), Positives = 194/409 (47%), Gaps = 48/409 (11%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 186 DLFTIIYTSGTTGEPKGVMLDYANLAHQLETHDLSLNVTDQDISLSFLPFSHIFERAWAA 245
Query: 86 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 246 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 305
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
I + + F L N K +L L LA+KLV
Sbjct: 306 WAISVGQKH---------FDLRANNKAIPFL---------------LKKQFALADKLVLS 341
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 342 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 401
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
+G + E+KI E NE+L VRG VM+GY+K P T QA EDG+L TG
Sbjct: 402 IGTLMPKAEVKI--GENNEIL---------VRGGMVMKGYYKKPEETAQAFTEDGFLKTG 450
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 451 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 500
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELR 432
++ A+IVP + + AK+L+I + D EL K I ++ ELR
Sbjct: 501 ADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSDILKMF-ELR 548
>gi|340751819|ref|ZP_08688629.1| long-chain-fatty-acid-CoA ligase [Fusobacterium mortiferum ATCC
9817]
gi|229420782|gb|EEO35829.1| long-chain-fatty-acid-CoA ligase [Fusobacterium mortiferum ATCC
9817]
Length = 829
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/393 (31%), Positives = 194/393 (49%), Gaps = 82/393 (20%)
Query: 15 KHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLP 74
++Y+ E + +A +YTSGTTGNPKGV+LT NL IR++ +I + D+ L++LP
Sbjct: 127 ENYEVEIDDMERVALLLYTSGTTGNPKGVVLTFNNLESNIRAVREIELVNDQDRVLAILP 186
Query: 75 PWHVYERAC--------GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 126
H+ G F+ + L + LK L+++Q +I VP V+E L+
Sbjct: 187 YHHILPLNLTLLMPMYFGTFL----VILEELSSEALKLALKKHQISVIIGVPRVWEMLHK 242
Query: 127 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 186
I +I ++ A+++ C N
Sbjct: 243 AIMGKINSNFVAKKLF-------------------NLCKKVNS----------------- 266
Query: 187 ICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 245
L K V+KK+ +G + + VSGG L + ++ +G+ + GYGLT
Sbjct: 267 ---------LALSKKVFKKVADELGGNMRVLVSGGAKLDPEVSANFKVLGLPIIEGYGLT 317
Query: 246 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 305
E+SP+IA RP NV+GS G I + E+KI AE E+L VRG+ VM+GY+K
Sbjct: 318 ETSPIIAFNRPNNNVIGSAGQLIPNIEVKI--AEDEEIL---------VRGANVMKGYYK 366
Query: 306 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 365
NP AT +A+D DGW +TGD+G + G L + GR K+ IVLS G+N+ P
Sbjct: 367 NPQATSEAIDSDGWFHTGDLG-----------KFEGDSLFIIGRKKEMIVLSNGKNINPG 415
Query: 366 ELEEAALR-SSLIRQIVVIGQDQRRPGAIIVPD 397
++E A L+ + L+++I V+ + A++ PD
Sbjct: 416 DIESAILKETDLVKEIAVMEYNNHL-MAVVYPD 447
>gi|319949400|ref|ZP_08023465.1| long-chain fatty-acid--CoA ligase [Dietzia cinnamea P4]
gi|319436930|gb|EFV91985.1| long-chain fatty-acid--CoA ligase [Dietzia cinnamea P4]
Length = 602
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/392 (32%), Positives = 190/392 (48%), Gaps = 58/392 (14%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI---VPAENGDKFLSMLPPWH 77
T+ D A+ +YTSGTTG PKG +TH+NLL + +L D A+ G K L LP H
Sbjct: 173 TLELDTPASIIYTSGTTGRPKGCAITHRNLLSECHALLDHPIGSMAQQGKKVLMFLPLAH 232
Query: 78 VYERACGYFIFSRGIELMYTAVRNLKDD-------LQRYQPHYMISVPLVYETLYSGIQK 130
V RA Y ++ + A DD ++PH ++ VP V+E + GI
Sbjct: 233 VLARAVTYTVY------LGDATVGFWDDTSTILPRFADFRPHMILGVPRVFEKVRDGIA- 285
Query: 131 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 190
T +AA+ V R + + A G + ++PS L A AR
Sbjct: 286 ---TKAAAKGAVQRRIFERAEAVAIEDSRLRGNDGLDDARRPSLLHA------ARYKALD 336
Query: 191 LWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
L LVY+ I++A+G + +SGGG+LP I F+ GV V GYGLTES+
Sbjct: 337 L---------LVYRAIRAALGGRCEYAISGGGALPDRISHFFRGAGVPVYEGYGLTESTA 387
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
P C +G+VG P+ T ++I D+ G V++ G + Y+ N A
Sbjct: 388 AATVNGPGCQRIGTVGRPVAGTSVRIADS-----------GEVELAGELIFDRYWNNEEA 436
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T +A+ DGW TGD+G + P G L + GRAK+ IV + G+NV P ++E+
Sbjct: 437 TAEAV-RDGWFATGDLGALDPD----------GYLTITGRAKEIIVTAGGKNVSPGQIED 485
Query: 370 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 401
A L+ V+IG+ ++ A+I D++E+
Sbjct: 486 AIRAHRLVGHAVLIGEARKFVSALITVDEDEL 517
>gi|84393678|ref|ZP_00992428.1| putative long-chain-fatty-acid-CoA ligase [Vibrio splendidus 12B01]
gi|84375677|gb|EAP92574.1| putative long-chain-fatty-acid-CoA ligase [Vibrio splendidus 12B01]
Length = 602
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 206/430 (47%), Gaps = 55/430 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+ T +YTSGTTG PKGVML + N+ +Q++ + + D L LP HV+ERA
Sbjct: 178 DDLLTLIYTSGTTGQPKGVMLDYTNVGYQLKGHDERLSLSKDDVSLCFLPLSHVFERAWT 237
Query: 85 YFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
+++ +G Y ++D L +P M +VP YE ++S I +++ + R+V+
Sbjct: 238 FYVLYKGATNCYLQDTMQVRDALSDVKPTVMSAVPRFYEKIFSAIHEKVSKAPFIRKVLF 297
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
+ + + + EG + PS++ L H LA+KLV
Sbjct: 298 TWAVNMGAKLSVCHQ--EG-------RTPSFM---------------LKKSHALADKLVL 333
Query: 204 KKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K+++ +G + + GG L I F+ AIG+ V++GYG+TE++ ++ C
Sbjct: 334 SKLRALLGGNINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDRCFNPD 393
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G + E+KI G+K + VRG VM+GY+K P T + DE G+L T
Sbjct: 394 SIGMSMPGAEVKI-----------GAKDEILVRGPMVMRGYYKMPEETAKTFDEHGFLKT 442
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD G + G L + R K+ + S G+ + P +E A + I QI V
Sbjct: 443 GDAGHFDEN----------GNLFITDRIKELMKTSGGKYIAPQVVEGAIGKDHFIEQIAV 492
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 434
I ++ A+IVP + + AK L+I + D EL K EK ++ L EL K+
Sbjct: 493 IADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELVKHHQIVEMLEKRVNDLQQELAKF 552
Query: 435 TSKCSFQIGP 444
F++ P
Sbjct: 553 EQVKKFKLLP 562
>gi|387792640|ref|YP_006257705.1| AMP-forming long-chain acyl-CoA synthetase [Solitalea canadensis
DSM 3403]
gi|379655473|gb|AFD08529.1| AMP-forming long-chain acyl-CoA synthetase [Solitalea canadensis
DSM 3403]
Length = 631
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/436 (28%), Positives = 220/436 (50%), Gaps = 52/436 (11%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
++++I +D A YTSGTT +PKG++L+H+N + ++ K L +LP H
Sbjct: 168 RFKSIKGNDYANISYTSGTTADPKGIILSHRNYTSNVEQALSLMNIPANWKTLIILPLDH 227
Query: 78 VYERACGYFIF----------SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSG 127
+ G++ F G M T ++N+ ++Q +P+ ++SVP + +
Sbjct: 228 CFAHVAGFYSFMASGASVATVDPGKNAMDT-LKNIPVNMQEIKPNLLLSVPALAKNFKKN 286
Query: 128 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 187
I+ I + ++I++AY EGF N+ Q + +V
Sbjct: 287 IESAIKQKGGITEKLFNHALKIAYAYNR-----EGF----NKGQGASIV----------- 326
Query: 188 CAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGYGLT 245
PL +K+++ K+++A G + GGG+L + IDL F+ AIGV + GYGL+
Sbjct: 327 ---YKPLLAFYDKILFSKVRNAFGGELSFFIGGGAL-LDIDLQRFFYAIGVPMFQGYGLS 382
Query: 246 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 305
E++P+I++ + LGS G+ + E+KI D + N LP G KG + ++G VM GY+K
Sbjct: 383 EATPIISSNSLKKHKLGSSGYLVKPMELKICDEQGNS-LPVGQKGEIVIKGENVMMGYWK 441
Query: 306 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 365
N +AT + ++GWL+TGD+G++ G L + GR K ++ S GE P
Sbjct: 442 NETATADTI-KNGWLHTGDLGYM----------DSDGFLYVLGRFKSLLIGSDGEKYSPE 490
Query: 366 ELEEAALRSS-LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 424
+EE+ + +S I Q+++ A++VP+KE + ++ + SE K++ I
Sbjct: 491 GIEESLVENSKFIDQVMLHNNQDAYTTALLVPNKESLKSYLRQKGLNW--ESEEGKKEAI 548
Query: 425 SLLYGELRKWTSKCSF 440
+L E+ ++ S+ F
Sbjct: 549 KMLQAEVNEYKSQGKF 564
>gi|424048004|ref|ZP_17785560.1| AMP-binding enzyme family protein [Vibrio cholerae HENC-03]
gi|408883314|gb|EKM22101.1| AMP-binding enzyme family protein [Vibrio cholerae HENC-03]
Length = 602
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/437 (29%), Positives = 209/437 (47%), Gaps = 55/437 (12%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ E +D+ T +YTSGTTG PKGVML + N+ Q+ + + D L LP H
Sbjct: 171 RLEQAQEEDLLTLIYTSGTTGQPKGVMLDYANISAQLEGHDERLSLTEDDVSLCFLPLSH 230
Query: 78 VYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ERA +++ +G Y ++D L +P M +VP YE ++S I +++ +
Sbjct: 231 VFERAWTFYVLYKGATNCYLQDTMQVRDALSEVRPTVMSAVPRFYEKIFSAIHEKVSRAP 290
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
R+++ + + A + EG ++PS + L +
Sbjct: 291 VHRKIMFTWAVNMGAKMAACHQ--EG-------RKPSLM---------------LRKSYA 326
Query: 197 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 327 LADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWD 386
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
C S+G + ++KI E NE+L VRG VM+GY+K P T++ D
Sbjct: 387 DQCFDPSSIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETEKTFD 435
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
E G+L TGD G+I + G L + R K+ + S G+ + P +E A +
Sbjct: 436 EHGFLKTGDAGYIDEN----------GNLFITDRIKELMKTSNGKYIAPQVVEGAIGKDH 485
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLL 427
I QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 486 FIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQIVEMLEKRVNDL 545
Query: 428 YGELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 546 QKELAKFEQVKKFKLLP 562
>gi|269956645|ref|YP_003326434.1| AMP-dependent synthetase and ligase [Xylanimonas cellulosilytica
DSM 15894]
gi|269305326|gb|ACZ30876.1| AMP-dependent synthetase and ligase [Xylanimonas cellulosilytica
DSM 15894]
Length = 622
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/382 (31%), Positives = 189/382 (49%), Gaps = 53/382 (13%)
Query: 23 GSDDIATYVYTSGTTGNPKGVMLTHKNLLH-QIRSLYDIVPAENG-DKFLSMLPPWHVYE 80
G+DD+AT +YTSGTTG PKG LTH N + ++ ++ NG + + LP HV+
Sbjct: 196 GADDLATIIYTSGTTGRPKGAELTHGNFTTLALNTVAEVPEVFNGMGRTIIFLPLAHVFA 255
Query: 81 RACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
R + G L ++ ++NL DL ++P Y++ VP ++E +Y+ ++ SSAA
Sbjct: 256 RFVEVVAVAGGSVLGHSPDIKNLTKDLAAFRPTYLLGVPRIFEKVYNTAEQ----SSAAE 311
Query: 140 RVVARALIRISFAYT-AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
+ AR + A A+ R + ++ PS LW + L A
Sbjct: 312 K--ARGYFNWATAVAIAYSRALD------TERGPS--------LWLKF-------QRLFA 348
Query: 199 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+ LVY K++ +G K VSGGG L + FY IG+ + GYGLTE++ + RP
Sbjct: 349 DGLVYSKLRDKLGGRVKFAVSGGGPLGERLGHFYRGIGLHIIEGYGLTETTAPTSVNRPG 408
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
+GSVG + + I D G + ++G + +GY +NP AT A DED
Sbjct: 409 ATRVGSVGQMLPGCSVSIAD-----------DGEILLKGPHLFRGYHRNPEATAAAFDED 457
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GW TGD+G + G + + GR K+ IV + G+NV P LE+ +L+
Sbjct: 458 GWFRTGDLGKVDDE----------GFVHITGRKKEIIVTAGGKNVAPAVLEDRVRAHALV 507
Query: 378 RQIVVIGQDQRRPGAIIVPDKE 399
Q VV+G ++ GA++ D E
Sbjct: 508 SQCVVVGDNRPFIGALVTLDAE 529
>gi|156973145|ref|YP_001444052.1| hypothetical protein VIBHAR_00824 [Vibrio harveyi ATCC BAA-1116]
gi|156524739|gb|ABU69825.1| hypothetical protein VIBHAR_00824 [Vibrio harveyi ATCC BAA-1116]
Length = 602
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/437 (29%), Positives = 208/437 (47%), Gaps = 55/437 (12%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ E DD+ T +YTSGTTG PKGVML + N+ Q+ + D L LP H
Sbjct: 171 RLEQAQEDDLLTLIYTSGTTGQPKGVMLDYANISAQLEGHDQCLSLTEDDVSLCFLPLSH 230
Query: 78 VYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ERA +++ +G Y ++D L +P M +VP YE ++S I +++ +
Sbjct: 231 VFERAWTFYVLYKGGTNCYLQDTMQVRDALSEVRPTVMSAVPRFYEKIFSAIHEKVSRAP 290
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
R+++ + + A + EG ++PS + L +
Sbjct: 291 VHRKIMFTWAVNMGAKMAACHQ--EG-------RKPSLM---------------LRKSYA 326
Query: 197 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 327 LADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWD 386
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
C S+G + ++KI E NE+L VRG VM+GY+K P T++ D
Sbjct: 387 DQCFDPSSIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETEKTFD 435
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
E G+L TGD G+I + G L + R K+ + S G+ + P +E A +
Sbjct: 436 EHGFLKTGDGGYIDEN----------GNLFITDRIKELMKTSNGKYIAPQVVEGAIGKDH 485
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLL 427
I QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 486 FIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQIVEMLEKRVNDL 545
Query: 428 YGELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 546 QKELAKFEQVKKFKLLP 562
>gi|406673705|ref|ZP_11080926.1| hypothetical protein HMPREF9700_01468 [Bergeyella zoohelcum CCUG
30536]
gi|405586170|gb|EKB59962.1| hypothetical protein HMPREF9700_01468 [Bergeyella zoohelcum CCUG
30536]
Length = 593
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 132/439 (30%), Positives = 207/439 (47%), Gaps = 68/439 (15%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDK-----FLSMLPPW 76
I DD+AT +YTSGTTG PKGVML+HKN++ + + +P ++G K LS LP
Sbjct: 169 IKEDDLATIIYTSGTTGKPKGVMLSHKNIVSNVLASVPRIPRKSGLKNTDTVVLSFLPIC 228
Query: 77 HVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 135
H++ER + G + + ++ + ++++ +PH M VP + E +Y I +
Sbjct: 229 HIFERMIYHLYQYNGFSIYFAESIEKMGENIKEVKPHIMTVVPRLIEKVYDKIYDK---G 285
Query: 136 SAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLH 195
++A + ++ + A K I +PS L
Sbjct: 286 TSAGGLKSKIFLWALGVMKAKKGI----------SKPSGLK------------------E 317
Query: 196 LLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
+LA+KLV+KK + +G + VSG +L ++ ++ G+ + GYGLTE+SPVI+
Sbjct: 318 ILADKLVFKKWREGLGGNIITLVSGSAALSARLNKMFQNAGIPILEGYGLTETSPVISVN 377
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
+GSVGHP+++ E+KI+ S G + V+G V GY+KN TK+
Sbjct: 378 SFGRIKVGSVGHPLDNLEVKIL-----------SDGEIAVKGPSVFIGYYKNEEMTKEVF 426
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
EDG+ TGDIG G L + R K+ S G+ V P +E A S
Sbjct: 427 TEDGFFKTGDIGHFDEE----------GYLHITDRKKEMFKTSGGKYVAPQVIENMAKAS 476
Query: 375 SLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD-------ASELSK--EKTIS 425
I QI+V+G+ ++ P A + PD V A R + + EL K E+ I
Sbjct: 477 KFIEQIMVVGEGEKMPAAFVQPDFAFVKNWAIRKGYTIGETPEEMVKSPELRKRLEREID 536
Query: 426 LLYGELRKWTSKCSFQIGP 444
L +L KW F++ P
Sbjct: 537 YLNTKLGKWEQVKKFELTP 555
>gi|271964208|ref|YP_003338404.1| long-chain-fatty-acid--CoA ligase [Streptosporangium roseum DSM
43021]
gi|270507383|gb|ACZ85661.1| putative long-chain-fatty-acid--CoA ligase [Streptosporangium
roseum DSM 43021]
Length = 597
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/383 (31%), Positives = 185/383 (48%), Gaps = 54/383 (14%)
Query: 23 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL----YDIVPAENGDKFLSMLPPWHV 78
G+ D+AT VYTSGTTG PKG LTH NLL R++ + + G L LP HV
Sbjct: 176 GAADLATIVYTSGTTGRPKGCSLTHDNLLFTARNVAAGPLEPLFTAAGRAALLFLPLAHV 235
Query: 79 YERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
+ R + G L +T ++N+ DLQ ++P +++ VP V+E +Y+G +++
Sbjct: 236 FARMIQLVLIETGTVLAHTPNMKNVAPDLQAFKPTFLLGVPRVFEKVYNGAEQKAAGDGK 295
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
++ A A I+++ ++ P + L H L
Sbjct: 296 SKIFHAAADTAIAWSRA------------QSAGGPGLGLRL---------------RHTL 328
Query: 198 AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 256
+KLVY K+++A G A VSGG +L + F+ +G++V G+GLTE+S A P
Sbjct: 329 FDKLVYGKLRAATGGRLSAAVSGGSALGERLAHFFRGVGIEVFEGWGLTETSAPSAVNMP 388
Query: 257 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 316
N +G+VG P I I G G V V+G V GY+ + AT +A+D
Sbjct: 389 GANKIGTVGKPFPGVTIGI-----------GDDGEVLVKGRHVFAGYWNDDKATGEAIDA 437
Query: 317 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 376
DGW +TGD+G + G L + GR K+ +V + G+NV P +E+ L
Sbjct: 438 DGWFHTGDVGELDKD----------GYLRITGRKKEILVTAAGKNVAPAPMEDLIRAHPL 487
Query: 377 IRQIVVIGQDQRRPGAIIVPDKE 399
I Q +V+G D+ AII D E
Sbjct: 488 ISQAMVVGDDRPFVAAIITLDPE 510
>gi|153834232|ref|ZP_01986899.1| AMP-binding family protein [Vibrio harveyi HY01]
gi|148869420|gb|EDL68426.1| AMP-binding family protein [Vibrio harveyi HY01]
Length = 602
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/437 (29%), Positives = 208/437 (47%), Gaps = 55/437 (12%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ E DD+ T +YTSGTTG PKGVML + N+ Q+ + D L LP H
Sbjct: 171 RLEQAQEDDLLTLIYTSGTTGQPKGVMLDYANISAQLEGHDQRLSLTEDDVSLCFLPLSH 230
Query: 78 VYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ERA +++ +G Y ++D L +P M +VP YE ++S I +++ +
Sbjct: 231 VFERAWTFYVLYKGGTNCYLQDTMQVRDALSEVRPTVMSAVPRFYEKIFSAIHEKVSRAP 290
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
R+++ + + A + EG ++PS + L +
Sbjct: 291 VHRKIMFTWAVNMGAKMAACHQ--EG-------RKPSLM---------------LRKSYA 326
Query: 197 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 327 LADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWD 386
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
C S+G + ++KI E NE+L VRG VM+GY+K P T++ D
Sbjct: 387 DQCFDPSSIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETEKTFD 435
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
E G+L TGD G+I + G L + R K+ + S G+ + P +E A +
Sbjct: 436 EHGFLKTGDAGYIDEN----------GNLFITDRIKELMKTSNGKYIAPQVVEGAIGKDH 485
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLL 427
I QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 486 FIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQIVEMLEKRVNDL 545
Query: 428 YGELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 546 QKELAKFEQVKKFKLLP 562
>gi|218708425|ref|YP_002416046.1| long-chain-fatty-acid--CoA ligase [Vibrio splendidus LGP32]
gi|218321444|emb|CAV17396.1| Long-chain-fatty-acid--CoA ligase [Vibrio splendidus LGP32]
Length = 602
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 206/430 (47%), Gaps = 55/430 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+ T +YTSGTTG PKGVML + N+ +Q++ + + D L LP HV+ERA
Sbjct: 178 DDLLTLIYTSGTTGQPKGVMLDYTNVGYQLKGHDERLSLSKDDVSLCFLPLSHVFERAWT 237
Query: 85 YFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
+++ +G Y ++D L +P M +VP YE ++S I +++ + R+V+
Sbjct: 238 FYVLYKGATNCYLQDTMQVRDALSDVKPTVMSAVPRFYEKIFSAIHEKVSKAPFIRKVLF 297
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
+ + + + EG + PS++ L H LA+KLV
Sbjct: 298 TWAVNMGAKLSVCHQ--EG-------RTPSFM---------------LKKSHALADKLVL 333
Query: 204 KKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K+++ +G + + GG L I F+ AIG+ V++GYG+TE++ ++ C
Sbjct: 334 SKLRALLGGNINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDRCFNPD 393
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G + E+KI G+K + VRG VM+GY+K P T + DE G+L T
Sbjct: 394 SIGMSMPGAEVKI-----------GAKDEILVRGPMVMRGYYKMPEETAKTFDEHGFLKT 442
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD G + G L + R K+ + S G+ + P +E A + I QI V
Sbjct: 443 GDAGHFDEN----------GNLFITDRIKELMKTSGGKYIAPQVVEGAIGKDHFIEQIAV 492
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 434
I ++ A+IVP + + AK L+I + D EL K EK ++ L EL K+
Sbjct: 493 IADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELVKNHQIVEMLEKRVNDLQQELAKF 552
Query: 435 TSKCSFQIGP 444
F++ P
Sbjct: 553 EQVKKFKLLP 562
>gi|409098435|ref|ZP_11218459.1| AMP-dependent synthetase and ligase [Pedobacter agri PB92]
Length = 591
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/409 (31%), Positives = 198/409 (48%), Gaps = 54/409 (13%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+DI T +YTSGTTG PKGVMLTH NL+ + ++P + +K LS LP H++ER
Sbjct: 171 EDILTLIYTSGTTGTPKGVMLTHDNLVANFVNSSVVMP-DGVNKSLSFLPLSHIFERMII 229
Query: 85 Y-FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
Y ++F++ ++ + D+Q +P+ +VP + E +Y I ++ + + +R +
Sbjct: 230 YLYLFNKTSIYYAESMDTIVADIQHVKPNAFSTVPRLLEKVYDKIMEKGKSLTGIKRGIF 289
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
+ ++ YT + F L +A KLV+
Sbjct: 290 FWSVALAEKYTTDAGAWYNFKLG------------------------------IARKLVF 319
Query: 204 KKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
KK Q A+G VSGG +L + + A G+ V GYGLTE+SPVI + G
Sbjct: 320 KKWQEALGGEIVVIVSGGAALNPRLARIFWAAGMPVFEGYGLTETSPVITVNHFGGTMFG 379
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
+VG I E+KI A+ EVL RG QVM+GY+ P TK+A+D +GW +T
Sbjct: 380 TVGEVIKGVEVKI--AQDGEVL---------TRGHQVMKGYYNRPDLTKEAIDAEGWFHT 428
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GDIG + G L + R K+ + G+ V P LE S I QI+V
Sbjct: 429 GDIGELID----------GRFLKITDRKKEMFKTAGGKYVAPQILENKYKESIFIEQIMV 478
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGEL 431
+G++++ P A+IVP+ E + A + I E+ K + + + E+
Sbjct: 479 LGENRKFPSALIVPNFETLKTWAAKKGINFTTNEEIIKNEQVLAKFNEI 527
>gi|340622356|ref|YP_004740808.1| Long-chain acyl-CoA synthetase [Capnocytophaga canimorsus Cc5]
gi|339902622|gb|AEK23701.1| Long-chain acyl-CoA synthetase [Capnocytophaga canimorsus Cc5]
Length = 597
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 215/414 (51%), Gaps = 50/414 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI-VPAENGDKFLSMLPPWHVYERAC 83
+D+ T +YTSGTTG+PKGVML ++NL HQ+++ +DI + + D L+ LP HV+ERA
Sbjct: 179 NDLFTIIYTSGTTGDPKGVMLDYENLAHQLKN-HDIRLKLSSEDVSLAFLPLSHVFERAW 237
Query: 84 GYFIFSRGIELMYTAV-RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
++ +G Y +K L +P M +VP YE ++ + I +S +R+V
Sbjct: 238 TFYSLYKGATNHYLENPLEIKSALLEVKPTVMCAVPRFYEKVFGTVYDMISGASLVKRLV 297
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
SFA + K++ + + K+PS+ L + ++EKLV
Sbjct: 298 ------FSFATRSGKQMLKA---KQKHKKPSWF---------------LQKAYQISEKLV 333
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
+ K++ ++G + GG +L I F++AIGV V++GYG+TE+ ++ L
Sbjct: 334 FSKLKQSLGGRIRFMPCGGANLEPSIGRFFQAIGVNVKLGYGMTETLATVSCWDDIDFNL 393
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
SVG + T++KI E NE+L V+G VM+GY+KNP T++A +DG+L
Sbjct: 394 KSVGRLMPDTQMKI--GEDNEIL---------VKGGMVMKGYYKNPEETQKAFTQDGFLK 442
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD G + +++ + + R K+ + S G+ + P +E + ++I QI
Sbjct: 443 TGDAGNLDKYNN----------VFITDRIKELMKTSNGKYIAPQHIEGKVGKDNVIDQIA 492
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKW 434
VI ++ A+IVP+ E + L+I + + ++L K + I + L+K+
Sbjct: 493 VIADGRKFVSALIVPNFEVLQQMMADLNIKYKNTTDLIKNSQVIDFINKRLQKF 546
>gi|427428169|ref|ZP_18918211.1| Long-chain-fatty-acid--CoA ligase [Caenispirillum salinarum AK4]
gi|425882870|gb|EKV31549.1| Long-chain-fatty-acid--CoA ligase [Caenispirillum salinarum AK4]
Length = 670
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/393 (32%), Positives = 194/393 (49%), Gaps = 59/393 (15%)
Query: 14 GKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAEN-GDK-FLS 71
G+ +E +DD A +YTSGT G PKGVML+HKN+L +D++ GD+ FLS
Sbjct: 174 GRPKHWEGAEADDTACIIYTSGTGGAPKGVMLSHKNVLANCMGAFDVLEILGLGDEVFLS 233
Query: 72 MLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQ 129
LP H YE + G +F S G ++ Y + L ++ Q +P +VP ++E + + I
Sbjct: 234 FLPLSHSYEHSAGQFFPISIGAQIYYAEGLDKLSENFQEVRPTITTAVPRLFEFMRNRIL 293
Query: 130 KQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICA 189
+ + + + + Y A + + +K + A+ +W+ R
Sbjct: 294 RAMEKQTGTK---------VKLFYKAIE-----LGAKKYEKGLGPMEAMTNWVLGR---- 335
Query: 190 ILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESS 248
LV +K+ G KA VSGG L I LF+ A+ V + GYG TE++
Sbjct: 336 -----------LVRRKVAQRFGGRLKALVSGGAPLNYDIGLFFMALDVPILQGYGQTEAA 384
Query: 249 PVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPS 308
PVI+ +RP L SVG P+ E++I AE E+L RG VM+GY+K P
Sbjct: 385 PVISVQRPGSVRLESVGPPLKGVEVQI--AEDGEIL---------ARGPMVMRGYWKGPE 433
Query: 309 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 368
T++A+D +GWL+TGD+G H G +V+ R KD IV S G+N+ P +E
Sbjct: 434 QTRKAIDAEGWLHTGDVG----HFDD------AGNIVITDRKKDIIVNSGGDNIAPARVE 483
Query: 369 EAALRSSLIRQIVVIGQDQRRPG--AIIVPDKE 399
I Q +V G RRP A++VPD +
Sbjct: 484 GFLTLEPEIAQAMVYG--DRRPHLVALLVPDPD 514
>gi|423316667|ref|ZP_17294572.1| hypothetical protein HMPREF9699_01143 [Bergeyella zoohelcum ATCC
43767]
gi|405583008|gb|EKB56979.1| hypothetical protein HMPREF9699_01143 [Bergeyella zoohelcum ATCC
43767]
Length = 593
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 132/439 (30%), Positives = 207/439 (47%), Gaps = 68/439 (15%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDK-----FLSMLPPW 76
I DD+AT +YTSGTTG PKGVML+HKN++ + + +P ++G K LS LP
Sbjct: 169 IKEDDLATIIYTSGTTGKPKGVMLSHKNIVSNVVASVPRIPRKSGLKNTDTVVLSFLPIC 228
Query: 77 HVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 135
H++ER + G + + ++ + ++++ +PH M VP + E +Y I +
Sbjct: 229 HIFERMIYHLYQYNGFSIYFAESIEKMGENIKEVKPHIMTVVPRLIEKVYDKIYDK---G 285
Query: 136 SAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLH 195
++A + ++ + A K I +PS L
Sbjct: 286 TSAGGLKSKIFLWALGVMKAKKGI----------SKPSGLK------------------E 317
Query: 196 LLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
+LA+KLV+KK + +G + VSG +L ++ ++ G+ + GYGLTE+SPVI+
Sbjct: 318 ILADKLVFKKWREGLGGNIITLVSGSAALSARLNKMFQNAGIPILEGYGLTETSPVISVN 377
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
+GSVGHP+++ E+KI+ S G + V+G V GY+KN TK+
Sbjct: 378 SFGRIKVGSVGHPLDNLEVKIL-----------SDGEIAVKGPSVFIGYYKNEEMTKEVF 426
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
EDG+ TGDIG G L + R K+ S G+ V P +E A S
Sbjct: 427 TEDGFFKTGDIGHFDEE----------GYLHITDRKKEMFKTSGGKYVAPQVIENMAKAS 476
Query: 375 SLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD-------ASELSK--EKTIS 425
I QI+V+G+ ++ P A + PD V A R + + EL K E+ I
Sbjct: 477 KFIEQIMVVGEGEKMPAAFVQPDFAFVKNWAIRKGYTIGETPEEMVKSPELRKRLEREID 536
Query: 426 LLYGELRKWTSKCSFQIGP 444
L +L KW F++ P
Sbjct: 537 YLNTKLGKWEQVKKFELTP 555
>gi|229821075|ref|YP_002882601.1| AMP-dependent synthetase and ligase [Beutenbergia cavernae DSM
12333]
gi|229566988|gb|ACQ80839.1| AMP-dependent synthetase and ligase [Beutenbergia cavernae DSM
12333]
Length = 608
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 122/382 (31%), Positives = 184/382 (48%), Gaps = 55/382 (14%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR----SLYDIVPAENGDKFLSMLPPWHVY 79
+DD+AT +YTSGTTG PKGV LTH N LH +R SL ++ + + L +P HV+
Sbjct: 175 ADDLATVIYTSGTTGRPKGVELTHGNFLHLVRNGVASLGEVC-NQPCSRTLLFMPLAHVF 233
Query: 80 ERACGYF-IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
R + S G+ R L DL + P ++++VP V+E +Y+ +++ T
Sbjct: 234 ARFIEVLCVTSAGVLGHSPGTRTLTQDLASFSPTFLLAVPRVFEKVYNSAEQKAGTGVRL 293
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
R A + I+++ + +PS +L H LA
Sbjct: 294 RLFRWSAKVAITYSRAG------------DSARPS---------------PVLRAQHALA 326
Query: 199 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+LV+ K+++A+G + + VSGG L + F+ IGV V GYGLTES+ A RP
Sbjct: 327 GRLVHGKLRAAMGGALEYAVSGGAPLGQRLGHFFRGIGVTVLEGYGLTESTAPTAVNRPE 386
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
+G+VG TEI I D G + VRG V +GY P AT +A D
Sbjct: 387 RIKIGTVGPAFPGTEIAIAD-----------DGEILVRGGHVFRGYRGAPDATAEAFTPD 435
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GW +TGD+G + G L + GR K+ I+ + G+NV P LE+ L+
Sbjct: 436 GWFHTGDLGTL----------DADGYLSITGRRKEIIITAGGKNVAPAALEDRLRGHPLV 485
Query: 378 RQIVVIGQDQRRPGAIIVPDKE 399
Q+VV+G + GA++ D +
Sbjct: 486 SQVVVVGDQRPFIGALVTIDAD 507
>gi|426405050|ref|YP_007024021.1| long-chain fatty acid CoA ligase (AMP-binding) [Bdellovibrio
bacteriovorus str. Tiberius]
gi|425861718|gb|AFY02754.1| long-chain fatty-acid-CoA ligase [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 593
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 206/430 (47%), Gaps = 52/430 (12%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 80
++ +DIAT +YTSGTTG PKGV++TH + ++ + + A D LS LP H+
Sbjct: 173 SLTQEDIATILYTSGTTGRPKGVVMTHLQAISEVSEAFPLCGATEADTSLSFLPYAHILG 232
Query: 81 RACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
R + G L + ++ ++ +L +P +++SVP ++E +Y+ + QI T
Sbjct: 233 RIEHWGHAYIGFTLAFAESLEKMRGNLTEVRPTFLMSVPRIFEKIYAAVTAQIQTQPLKM 292
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
++ + L K Y ++ +++ L + LA+
Sbjct: 293 KIF-------------------NWALEVGTKVGDYKMS------GQVLPLDLLVKYELAK 327
Query: 200 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
KLV KI +A G + +SGG +P I LF+ A GV + GYGLTE++ I P
Sbjct: 328 KLVLDKIPTAFGGRLRFAISGGAPIPREIALFFHAAGVLILEGYGLTETTAAITVNTPFN 387
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
GSVG PI ++KI AE E++ V+ +VM+ Y+KNP ATK+A DG
Sbjct: 388 YKFGSVGRPIGEVKLKI--AEDGEIM---------VKSDKVMKEYYKNPEATKEAFT-DG 435
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
W +TGDIG I P GG L + R KD I + G+ V P LE S I
Sbjct: 436 WFHTGDIGEILP----------GGDLKITDRKKDLIKTAGGKYVAPQRLEGLLSLSPYIA 485
Query: 379 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKC 438
++V G ++ A++ D+ V AK I ++D + L + ++ L +RK ++
Sbjct: 486 NVLVHGDQKKYIVALVTLDRPTVENLAKEKQINYSDWNSLVQSPFVAEL---IRKAVAET 542
Query: 439 SFQIGPIHVV 448
+ Q+ +
Sbjct: 543 NTQLASFESI 552
>gi|373467688|ref|ZP_09558982.1| AMP-binding enzyme [Haemophilus sp. oral taxon 851 str. F0397]
gi|371758409|gb|EHO47182.1| AMP-binding enzyme [Haemophilus sp. oral taxon 851 str. F0397]
Length = 602
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 126/407 (30%), Positives = 192/407 (47%), Gaps = 47/407 (11%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 178 DLFTIIYTSGTTGEPKGVMLDYANLAHQLETHDLSLNVTDQDVSLSFLPFSHIFERAWAA 237
Query: 86 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
+I +G L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 238 YILHKGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 297
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
I + + F L N K +L L LA+KLV
Sbjct: 298 WAISVGQKH---------FDLRANNKAIPFL---------------LKKQFALADKLVLS 333
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K+ +G S K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 334 KLHQLLGGSIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 393
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
+G + E+KI E NE+L VRG VM+GY+K P T QA EDG+L TG
Sbjct: 394 IGTLMPKAEVKI--GENNEIL---------VRGGMVMKGYYKKPEETAQAFTEDGFLKTG 442
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 443 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 492
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
++ A+IVP + + AK+L+I + D EL K I ++ +
Sbjct: 493 ADTKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSEILKMFEQ 539
>gi|393782192|ref|ZP_10370381.1| hypothetical protein HMPREF1071_01249 [Bacteroides salyersiae
CL02T12C01]
gi|392674226|gb|EIY67675.1| hypothetical protein HMPREF1071_01249 [Bacteroides salyersiae
CL02T12C01]
Length = 602
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 130/440 (29%), Positives = 211/440 (47%), Gaps = 56/440 (12%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM--LPPWHVYER 81
DD+A +YTSGTTG PKGVML H L R ++DI + DK +SM LP HV+E+
Sbjct: 179 EDDLANILYTSGTTGEPKGVMLHHSCFLEAFR-IHDIRLVDMSDKDVSMNFLPLTHVFEK 237
Query: 82 ACGYFIFSRGIELMYTAVR--NLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
A Y +G+++ +R +++ ++ +P M SVP +E +Y+G+Q++I ++ +
Sbjct: 238 AWSYLCIHKGVQICIN-LRPVDIQMTIKEIRPTLMCSVPRFWEKVYAGVQEKIAETTGIK 296
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + IR+ +I+ R K P ++ L + E
Sbjct: 297 KALMLDAIRVG-------KIH-NIDYLRKGKTPPLMLHL---------------KYQFYE 333
Query: 200 KLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
K VY ++ IGI + G ++P I F ++G+ + VGYGLTES+ ++ + +
Sbjct: 334 KTVYSLLKKTIGIENGNFFPTAGAAVPDEICEFVHSVGINMLVGYGLTESTATVSCFQNS 393
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
+GSVG + E+KI E NE+L +RG + +GY+K AT +A+D++
Sbjct: 394 GYEIGSVGTVMPDVEVKI--GENNEIL---------LRGKTITKGYYKKAEATAEAIDKE 442
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GW +TGD G++ G L L R KD S G+ + P LE I
Sbjct: 443 GWFHTGDAGYLN-----------GDCLYLTERIKDLFKTSNGKYISPQALETKLAIDRYI 491
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS 436
QI +I ++ A+IVP V AK I + D EL + K I L +
Sbjct: 492 DQIAIIADQRKFVSALIVPMYGFVKDYAKEKGIEYKDMEELLQHPKIIGLFRARIDTLQQ 551
Query: 437 KCSF--QIGPIHVVDEPFTV 454
+ + Q+ ++ EPF++
Sbjct: 552 QFAHYEQVKRFTLLPEPFSM 571
>gi|162456295|ref|YP_001618662.1| AMP-binding protein [Sorangium cellulosum So ce56]
gi|161166877|emb|CAN98182.1| AMP-binding enzyme family protein [Sorangium cellulosum So ce56]
Length = 1530
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/376 (31%), Positives = 188/376 (50%), Gaps = 59/376 (15%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+GS D+A+ VYTSGTTG PKGV+LTH N + SL + P + D+ LS+LP +E
Sbjct: 749 VGSQDVASVVYTSGTTGEPKGVLLTHGNFTALLASLAPLFPLKASDRVLSVLPLHQTFEV 808
Query: 82 ACGYFI-FSRGIELMY---TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
CG + S+G ++Y + + D L++ + M+ VP +++ L
Sbjct: 809 TCGLLLPLSQGARIIYLDEVSADRVSDGLKKARVTAMVGVPALWQML------------- 855
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
R++VAR + A TAF S+ + L L R L L
Sbjct: 856 ERQIVARVKEQGPAAATAF----------------SWAMELNRMLGKR--------LGLN 891
Query: 198 AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 256
A +L + + A+G + + +SGG +LP ++ +G+ + GYGLTE++P++ +P
Sbjct: 892 AGRLFFGSVHDALGGNVRFLISGGAALPRDTAAVFKGLGLPLAEGYGLTEAAPLLTVTKP 951
Query: 257 T-CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
+ G+VG PI +IKI + + N V G V RG VM+GY +P AT+ ALD
Sbjct: 952 SPAASPGNVGKPIPGVKIKIANPDANGV------GEVLARGPNVMKGYADDPDATQAALD 1005
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
DGWL TGD+G + G LVL GR + I + GE++ P ++E +
Sbjct: 1006 ADGWLRTGDLGKLDKQ----------GRLVLVGRQSEVISAAKGESLYPADIERMLGKIE 1055
Query: 376 LIRQIVVIGQDQRRPG 391
++++ ++G D R G
Sbjct: 1056 HVKELAIVGIDNGRGG 1071
>gi|160891396|ref|ZP_02072399.1| hypothetical protein BACUNI_03846 [Bacteroides uniformis ATCC 8492]
gi|156858803|gb|EDO52234.1| AMP-binding enzyme [Bacteroides uniformis ATCC 8492]
Length = 601
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 131/441 (29%), Positives = 206/441 (46%), Gaps = 56/441 (12%)
Query: 23 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM--LPPWHVYE 80
DD+A +YTSGTTG PKGVML H N R ++DI D+ +SM LP HV+E
Sbjct: 178 SDDDLANILYTSGTTGEPKGVMLHHFNYREAFR-IHDIRLPFMTDQDVSMNFLPLTHVFE 236
Query: 81 RACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
+A Y RG+++ + ++++ ++ +P M SVP +E +Y+G+Q++I + R
Sbjct: 237 KAWTYLCIHRGVQVCINLRPQDIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKISQETGLR 296
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + I++ + R K P ++ L + E
Sbjct: 297 KAMMLDAIKVGRTH--------NIDYLRQGKTPPMMLHL---------------KYKFYE 333
Query: 200 KLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
K +Y ++ IGI + G ++P I F ++G+ + VGYGLTES+ ++
Sbjct: 334 KTIYALLKKTIGIENGNFFPTAGAAVPDEICEFVHSVGINMVVGYGLTESTATVSCFLNE 393
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
+GSVG + E+KI E NE+L +RG + GY+K P AT A+D D
Sbjct: 394 GYEIGSVGTVMPDVEVKI--GENNEIL---------LRGKTITTGYYKKPEATAAAIDRD 442
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GW +TGD G++ H L L R KD S G+ + P LE I
Sbjct: 443 GWFHTGDAGYLKDSH-----------LYLTERIKDLFKTSNGKYISPQALETKLAIDRYI 491
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 437
QI VI +++ A+IVP V AK I +++ EL + I L+ R T +
Sbjct: 492 DQIAVIADERKFVSALIVPVYGFVKDYAKEKGIAYSNMDELLQHPKIQALF-RARIDTLQ 550
Query: 438 CSF----QIGPIHVVDEPFTV 454
F Q+ ++ EPF++
Sbjct: 551 QQFAHYEQVKRFTLLPEPFSM 571
>gi|399025084|ref|ZP_10727101.1| AMP-forming long-chain acyl-CoA synthetase [Chryseobacterium sp.
CF314]
gi|398079003|gb|EJL69880.1| AMP-forming long-chain acyl-CoA synthetase [Chryseobacterium sp.
CF314]
Length = 592
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 188/385 (48%), Gaps = 59/385 (15%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKF-----LSMLPPW 76
I S+D+AT +YTSGTTG PKGVMLTH N++ + +P + + LS LP
Sbjct: 169 INSEDLATIIYTSGTTGKPKGVMLTHHNIVSNVLGSIPRIPKKKSLDYKEVRVLSFLPIC 228
Query: 77 HVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 135
H++ER Y G + + ++ + ++++ +PHYM VP + E +Y I T
Sbjct: 229 HIFERMLFYLFQYNGFSIYFAESIDKMGENVKEVKPHYMSVVPRLVEKVYDKIYN---TG 285
Query: 136 SAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLH 195
S+A + ++ + L + +K+ S + +
Sbjct: 286 SSAGGLKSKIF-------------FWALNLIQKKKEVSKPSGIQE--------------- 317
Query: 196 LLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
++A+KLV+KK + +G VSG +L ++L ++ G+ + GYGLTE+SPVI+
Sbjct: 318 IIADKLVFKKWREGLGGEIITLVSGSAALSTRLNLMFQNAGIPILEGYGLTETSPVISVN 377
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
+G+VG P+++ ++KI + G + V+G V +GYFKN +K+A
Sbjct: 378 SFEKMKIGTVGLPLDNLKVKIQE-----------DGEITVKGPSVFKGYFKNEETSKEAF 426
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
EDG+ TGDIG I G L + R K+ S G+ + P +E A S
Sbjct: 427 TEDGYFKTGDIGHI----------DSDGFLQITDRKKEMFKTSGGKYIAPQTIENLAKAS 476
Query: 375 SLIRQIVVIGQDQRRPGAIIVPDKE 399
I QI+V+G ++ P A+I PD E
Sbjct: 477 KFIEQIMVVGDGEKMPCALIQPDFE 501
>gi|119512748|ref|ZP_01631819.1| AMP-dependent synthetase and ligase [Nodularia spumigena CCY9414]
gi|119462616|gb|EAW43582.1| AMP-dependent synthetase and ligase [Nodularia spumigena CCY9414]
Length = 392
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 89/204 (43%), Positives = 124/204 (60%), Gaps = 15/204 (7%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+ +AT VYTSGTTG PK ML+H NLLHQ+ SL +V E GD+ LS+LP WH+YER
Sbjct: 191 ESLATLVYTSGTTGQPKATMLSHGNLLHQVSSLAVVVQLEAGDRVLSILPTWHIYERVIE 250
Query: 85 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
YF FS+G L+YT +R+ K DL+ +P Y +SVP + E+++ + KQ SA +R +
Sbjct: 251 YFAFSQGCTLIYTNLRHFKQDLKVQKPQYFVSVPRLLESIHDEVHKQFRQESAQKRRLIN 310
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW----ARIICAILWPLHLLAEK 200
++ +S Y +RI L Q+ PS +W AR AILWP+H LA++
Sbjct: 311 YMLAMSDRYIRARRIVHRLSL--EQQNPS--------MWQRQRARTQTAILWPIHALADR 360
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSL 223
L+YKK++ IG K + GGGSL
Sbjct: 361 LIYKKVREQIGAELKQTICGGGSL 384
>gi|213963544|ref|ZP_03391797.1| long-chain-fatty-acid--CoA ligase homolog [Capnocytophaga sputigena
Capno]
gi|213953824|gb|EEB65153.1| long-chain-fatty-acid--CoA ligase homolog [Capnocytophaga sputigena
Capno]
Length = 599
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 129/414 (31%), Positives = 211/414 (50%), Gaps = 49/414 (11%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQ-IRSLYDIVPAENGDKFLSMLPPWHVYERAC 83
DD+ T +YTSGTTG PKGVML+++NL Q I + +N D L+ LP HV+ERA
Sbjct: 180 DDLFTIIYTSGTTGEPKGVMLSYENLAFQMIGHTERLSTVDNTDISLAFLPLSHVFERAW 239
Query: 84 GYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
+F + + + Y NL ++ L + +P M +VP YE +++ + + SS V
Sbjct: 240 TFFCLYKAVTVYYLDDTNLVREALAQVRPTLMCAVPRFYEKIFATVHDKADASS----FV 295
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
R L R++ A +R+ L K+PS L + L +KLV
Sbjct: 296 KRKLFRLAIA--TGRRV---LNLREQGKKPSL---------------ALQKAYNLFDKLV 335
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
YKK++ A+G K GG +L I F+++IG+ +++GYG+TE+ I+
Sbjct: 336 YKKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINLKLGYGMTETVATISCWGDNRINP 395
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
SVG + + +++I E NE+L V+G VM+GY+KNP T + DG+L
Sbjct: 396 QSVGEVMPNVQVRI--GEDNEIL---------VKGGMVMKGYYKNPEETAKVFTPDGYLR 444
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD G + ++S L + R K+ + S G+ + P +E + +LI QI
Sbjct: 445 TGDAGKLDGNNS----------LFITERIKELMKTSNGKYIAPQMIEGKVGKYNLIEQIA 494
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK-EKTISLLYGELRKW 434
V+ ++ A+IVP+ E + A K L+I + + ++L K + I + +L+K+
Sbjct: 495 VVADGKKFVSALIVPNFEMLSQALKDLNIKYKNTADLIKHSQVIEYIGKQLQKF 548
>gi|317478468|ref|ZP_07937628.1| AMP-binding enzyme [Bacteroides sp. 4_1_36]
gi|316905357|gb|EFV27151.1| AMP-binding enzyme [Bacteroides sp. 4_1_36]
Length = 601
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 131/441 (29%), Positives = 205/441 (46%), Gaps = 56/441 (12%)
Query: 23 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM--LPPWHVYE 80
DD+A +YTSGTTG PKGVML H N R ++DI D+ +SM LP HV+E
Sbjct: 178 SDDDLANILYTSGTTGEPKGVMLHHFNYREAFR-IHDIRLPFMTDQDVSMNFLPLTHVFE 236
Query: 81 RACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
+A Y RG+++ + ++++ ++ +P M SVP +E +Y+G+Q++I + R
Sbjct: 237 KAWTYLCIHRGVQVCINLRPQDIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKISQETGLR 296
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + I++ + R K P ++ L + E
Sbjct: 297 KAMMLDAIKVGRTH--------NIDYLRQGKTPPMMLHL---------------KYKFYE 333
Query: 200 KLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
K +Y ++ IGI + G ++P I F ++G+ + VGYGLTES+ ++
Sbjct: 334 KTIYALLKKTIGIENGNFFPTAGAAVPDEICEFVHSVGINMVVGYGLTESTATVSCFLNE 393
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
+GSVG + E+KI E NE+L +RG + GY+K P AT A+D D
Sbjct: 394 GYEIGSVGTVMPDVEVKI--GENNEIL---------LRGKTITTGYYKKPEATAAAIDRD 442
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GW +TGD G++ H L L R KD S G+ + P LE I
Sbjct: 443 GWFHTGDAGYLKDSH-----------LYLTERIKDLFKTSNGKYISPQALETKLAIDRYI 491
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 437
QI VI +++ A+IVP V AK I + + EL + I L+ R T +
Sbjct: 492 DQIAVIADERKFVSALIVPVYGFVKDYAKEKGIAYNNMDELLQHSKIQALF-RARIDTLQ 550
Query: 438 CSF----QIGPIHVVDEPFTV 454
F Q+ ++ EPF++
Sbjct: 551 QQFAHYEQVKRFTLLTEPFSM 571
>gi|167764189|ref|ZP_02436316.1| hypothetical protein BACSTE_02573 [Bacteroides stercoris ATCC
43183]
gi|167698305|gb|EDS14884.1| AMP-binding enzyme [Bacteroides stercoris ATCC 43183]
Length = 601
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 133/441 (30%), Positives = 208/441 (47%), Gaps = 62/441 (14%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM--LPPWHVYERAC 83
D+A +YTSGTTG PKGVML H N IR ++DI DK +SM LP HV+E+A
Sbjct: 181 DLANILYTSGTTGEPKGVMLHHFNYREAIR-IHDIRLTAMTDKDVSMNFLPLTHVFEKAW 239
Query: 84 GYFIFSRGIELMYTAV-RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
YF RG+++ +++ ++ +P M SVP +E +Y+G+Q++I S R+ +
Sbjct: 240 TYFCLHRGVQVCVNLRPADIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKIAQESGLRKAM 299
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL---LAE 199
+++ + ID+L A ++ LHL E
Sbjct: 300 MLDALKVGKMHN------------------------IDYLRAGKTPPLM--LHLKYKFYE 333
Query: 200 KLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
K +Y ++ IGI + G ++ I F ++G+ + VGYGLTES+ ++
Sbjct: 334 KTIYALLKKTIGIENGNFFPTAGAAVSDEICEFVHSVGINMVVGYGLTESTATVSCFLDK 393
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
+GSVG + E+KI E NE+L +RG + GY+K P AT A+D+D
Sbjct: 394 GYEIGSVGTVMPDLEVKI--GENNEIL---------LRGKTITTGYYKKPEATAAAIDKD 442
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GW +TGD G++ +H L L R KD S G+ + P LE I
Sbjct: 443 GWFHTGDAGYLKGNH-----------LYLTERIKDLFKTSNGKYISPQALETKLSIDRYI 491
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 437
QI VI ++ A+IVP V AK + + D ++L + + L+ R T +
Sbjct: 492 DQIAVIADQRKFVSALIVPVYGLVKNYAKEKGLEYKDMADLLQHPKVQALF-RARIDTLQ 550
Query: 438 CSF----QIGPIHVVDEPFTV 454
F Q+ ++ EPF++
Sbjct: 551 QQFAHYEQVKRFTLLSEPFSM 571
>gi|153949544|ref|YP_001402359.1| AMP binding protein [Yersinia pseudotuberculosis IP 31758]
gi|170025747|ref|YP_001722252.1| AMP-dependent synthetase and ligase [Yersinia pseudotuberculosis
YPIII]
gi|152961039|gb|ABS48500.1| AMP binding protein [Yersinia pseudotuberculosis IP 31758]
gi|169752281|gb|ACA69799.1| AMP-dependent synthetase and ligase [Yersinia pseudotuberculosis
YPIII]
Length = 601
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/424 (28%), Positives = 207/424 (48%), Gaps = 51/424 (12%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D LS LP H
Sbjct: 175 RIEACDLDDLFTLIYTSGTTGEPKGVMLDYRNMAAQLYLHDQRLTLTPQDVSLSFLPLSH 234
Query: 78 VYERACGYFIFSRGIELMYTAVRN---LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 134
V+ERA +++ G + +Y +RN ++ +Q +P M +VP YE ++S I ++
Sbjct: 235 VFERAWSFYVMHTGAQNVY--IRNTDWVRSAMQAVKPTVMCAVPRFYEKVFSAINDKVAL 292
Query: 135 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 194
+ +RV+ + FKR+ +G +P + WL + +
Sbjct: 293 AKWHQRVLFHWAV--GCGERKFKRLQQG--------RP------LPWLSEQ--------M 328
Query: 195 HLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 253
+ LA++LV +K++ +G + + G L +I LF++AIGV ++ GYG+TE+ ++
Sbjct: 329 YTLADRLVLRKLRGVLGGRVRFLPAAGARLDDNIILFFQAIGVNIKYGYGMTETCATVSC 388
Query: 254 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 313
GS+G P+ ++++ G++ ++VRG VM+GYFK P T +A
Sbjct: 389 WEEQNFRFGSIGKPLPGIDVRL-----------GAENEIQVRGPIVMRGYFKKPQETLEA 437
Query: 314 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 373
EDGWL TGD G + G L + R KD + S G+ + P +E +
Sbjct: 438 FTEDGWLKTGDAGALDAQ----------GHLFITERLKDLMKTSGGKYIAPQMIEGTLGQ 487
Query: 374 SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRK 433
I Q+ +I ++ A+IVP E + A+ +++ + D EL + I ++ + K
Sbjct: 488 DRFIEQVAIIADTRKFVSALIVPSFESLEEYARSINLKYHDRLELLRHSHIVNMFEQRLK 547
Query: 434 WTSK 437
K
Sbjct: 548 EIQK 551
>gi|417825702|ref|ZP_12472290.1| AMP-binding enzyme family protein [Vibrio cholerae HE48]
gi|340047187|gb|EGR08117.1| AMP-binding enzyme family protein [Vibrio cholerae HE48]
Length = 601
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 131/435 (30%), Positives = 207/435 (47%), Gaps = 55/435 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+
Sbjct: 173 EQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVF 232
Query: 80 ERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ERA ++ +G Y V ++++ L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLV 292
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
R+V+ F + C + Q+QPS++ L H A
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------------LKQSHQFA 328
Query: 199 EKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 329 DKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDH 388
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
C S+G + ++KI E NE+L VRG VM+GY+K T ++ DE
Sbjct: 389 CFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLDKETAESFDEH 437
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
G+L TGD G I + G L + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 429
QI VI ++ A+IVP + + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCFDSLEVYAKELNIKYQDRLELLKHSQVLEMFEKRVNDLQK 547
Query: 430 ELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFRLLP 562
>gi|453382102|dbj|GAC83309.1| long-chain fatty-acid--CoA ligase [Gordonia paraffinivorans NBRC
108238]
Length = 595
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 122/382 (31%), Positives = 186/382 (48%), Gaps = 54/382 (14%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDKFLSMLPPWHVYER 81
S D AT +YTSGTTG PKGV+LTH N + + + D V A + G + L LP HV R
Sbjct: 178 SSDAATLIYTSGTTGRPKGVLLTHANFMAECAATRDAVGAGLQEGKQTLLFLPLAHVLAR 237
Query: 82 ACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
+ L +T + NL D ++PHY++SVP V+E +Y+
Sbjct: 238 IIAVAAIENRVILGHTNDIANLVDLFATFKPHYVLSVPRVFEKVYN-------------- 283
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+A ++ Y+G + +K + + A I L H L +K
Sbjct: 284 -------------SAKQKAYDGGKGSIFEKATETAIEYSKAMEAGKIGLGLKLRHALFDK 330
Query: 201 LVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LVY K+++A+G G +SGG L + F+ +G+ V GYGLTE++ + A
Sbjct: 331 LVYGKLRAALGGQCEGAISGGAPLGARLGHFFRGVGIPVYEGYGLTETTAAVTANNEKHQ 390
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
+GSVG P+ ++I AE E+L V+G V GY++N AT A+ DGW
Sbjct: 391 KVGSVGRPVPGVTVRI--AEDGEIL---------VKGPMVFSGYWQNEQATADAI-RDGW 438
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
+TGD+G + G L + GR K+ IV + G+NV P +LE++ L+ Q
Sbjct: 439 FHTGDVGTLDD-----------GYLFITGRKKELIVTAGGKNVAPAQLEDSIRAHPLVSQ 487
Query: 380 IVVIGQDQRRPGAIIVPDKEEV 401
+V+G ++ GA+I D E +
Sbjct: 488 CLVVGDNKPFIGALITLDAEAI 509
>gi|153826974|ref|ZP_01979641.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae MZO-2]
gi|149739172|gb|EDM53454.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae MZO-2]
Length = 601
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 131/435 (30%), Positives = 207/435 (47%), Gaps = 55/435 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+
Sbjct: 173 EQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVF 232
Query: 80 ERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ERA ++ +G Y V ++++ L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLV 292
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
R+V+ F + C + Q+QPS++ L H A
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------------LKQSHQFA 328
Query: 199 EKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 329 DKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDH 388
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
C S+G + ++KI E NE+L VRG VM+GY+K T ++ DE
Sbjct: 389 CFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLDKETAESFDEH 437
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
G+L TGD G I + G L + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 429
QI VI ++ A+IVP + + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCFDSLEVYAKELNIKYQDRLELLKHSQVLEMFEKRVNDLQK 547
Query: 430 ELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFRLLP 562
>gi|145630709|ref|ZP_01786488.1| long chain fatty acid CoA ligase [Haemophilus influenzae R3021]
gi|144983835|gb|EDJ91285.1| long chain fatty acid CoA ligase [Haemophilus influenzae R3021]
Length = 599
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 126/405 (31%), Positives = 191/405 (47%), Gaps = 47/405 (11%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 178 DLFTIIYTSGTTGEPKGVMLDYANLAHQLETHDLSLNVTDQDISLSFLPFSHIFERAWAA 237
Query: 86 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 238 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 297
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
I + + F L N K +L L LA+KLV
Sbjct: 298 WAISVGQKH---------FDLRANNKAIPFL---------------LKKQFALADKLVLS 333
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 334 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 393
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
+G + E+KI E NE+L VRG VM+GY+K P T QA EDG+L TG
Sbjct: 394 IGTLMPKAEVKI--GENNEIL---------VRGGMVMKGYYKKPEETAQAFTEDGFLKTG 442
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 443 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 492
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
++ A+IVP + + AK+L+I + D EL K I ++
Sbjct: 493 ADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSDILKMF 537
>gi|229845424|ref|ZP_04465554.1| long chain fatty acid CoA ligase [Haemophilus influenzae 6P18H1]
gi|229811620|gb|EEP47319.1| long chain fatty acid CoA ligase [Haemophilus influenzae 6P18H1]
Length = 599
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 127/407 (31%), Positives = 192/407 (47%), Gaps = 47/407 (11%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 178 DLFTIIYTSGTTGEPKGVMLDYANLAHQLETHDLSLNVTDQDISLSFLPFSHIFERAWAA 237
Query: 86 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 238 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIM-- 295
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
Y A + F L N K +L L LA+KLV
Sbjct: 296 -------FYWAISVGQKHFDLRANNKTVPFL---------------LKKQFALADKLVLS 333
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 334 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 393
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
+G + E+KI E NE+L VRG VM+GY+K P T QA EDG+L TG
Sbjct: 394 IGTLMPKAEVKI--GENNEIL---------VRGGMVMKGYYKKPEETAQAFTEDGFLKTG 442
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 443 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 492
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
++ A+IVP + + AK+L+I + D EL K I ++ +
Sbjct: 493 ADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSDILKMFEQ 539
>gi|229521309|ref|ZP_04410729.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae TM 11079-80]
gi|421355168|ref|ZP_15805500.1| AMP-binding enzyme family protein [Vibrio cholerae HE-45]
gi|229341841|gb|EEO06843.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae TM 11079-80]
gi|395954293|gb|EJH64906.1| AMP-binding enzyme family protein [Vibrio cholerae HE-45]
Length = 601
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 131/435 (30%), Positives = 207/435 (47%), Gaps = 55/435 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+
Sbjct: 173 EQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVF 232
Query: 80 ERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ERA ++ +G Y V ++++ L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLV 292
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
R+V+ F + C + Q+QPS++ L H A
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------------LKQSHQFA 328
Query: 199 EKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 329 DKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDH 388
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
C S+G + ++KI E NE+L VRG VM+GY+K T ++ DE
Sbjct: 389 CFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLDKETAESFDEH 437
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
G+L TGD G I + G L + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 429
QI VI ++ A+IVP + + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCFDSLEVYAKELNIKYQDRLELLKHSQVLEMFEKRVNDLQK 547
Query: 430 ELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFRLLP 562
>gi|319896424|ref|YP_004134617.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae F3031]
gi|317431926|emb|CBY80272.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
F3031]
Length = 599
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 126/407 (30%), Positives = 192/407 (47%), Gaps = 47/407 (11%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 178 DLFTIIYTSGTTGKPKGVMLDYANLAHQLETHDLSLNVTDQDISLSFLPFSHIFERAWAA 237
Query: 86 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 238 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 297
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
I + + F L N K +L L LA+KLV
Sbjct: 298 WAISVG---------QKHFDLRANNKAIPFL---------------LKKQFALADKLVLS 333
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 334 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 393
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
+G + E+KI E NE+L VRG VM+GY+K P T QA EDG+L TG
Sbjct: 394 IGTLMPKAEVKI--GENNEIL---------VRGGMVMKGYYKKPEETAQAFTEDGFLKTG 442
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 443 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 492
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
++ A+IVP + + AK+L+I + D EL K I ++ +
Sbjct: 493 ADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSDILKMFEQ 539
>gi|296272883|ref|YP_003655514.1| AMP-dependent synthetase and ligase [Arcobacter nitrofigilis DSM
7299]
gi|296097057|gb|ADG93007.1| AMP-dependent synthetase and ligase [Arcobacter nitrofigilis DSM
7299]
Length = 573
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 200/417 (47%), Gaps = 62/417 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DDI + VYTSG TG+PKGV+L+HKN++ Q++ + +++ + + LS+LP H++ERA
Sbjct: 169 DDIFSIVYTSGNTGDPKGVILSHKNIISQVKDINELIQLDKKEVILSILPLAHIFERAVM 228
Query: 85 YFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
+ SRG+ + + + N+ ++ +P M VP + E +Y I+ I +++A
Sbjct: 229 SYYISRGVSIYFIDDITNVATLMKTVRPTMMTVVPRLLEKIYYKIKTNISDKPFFSKLIA 288
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
SFA+ + L N + S L L + KLVY
Sbjct: 289 ------SFAF--------HYALKENINKDSILFKLFN-------------------KLVY 315
Query: 204 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K + G K VSGG L +I F+ I V + GYG+TE SPVI+ P N +G
Sbjct: 316 SKFREIFGGRIKWLVSGGAPLEKNIYQFFLNIEVPLYQGYGMTEFSPVISTNYPGANRVG 375
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
+ G + E+KI E +E+L V+G +M+GY N TK+ +DE GWL+T
Sbjct: 376 TSGKAMPTAEVKI---ENDELL---------VKGPSLMKGYLNNEELTKKTIDEKGWLHT 423
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD+ I G + ++ R KD STGE V + +E+ ++ I V+
Sbjct: 424 GDVASIDE----------DGYIYIQSRKKDIFKTSTGEYVNAIPIEQELSKNKYIEFAVL 473
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIV---HADASELSK--EKTISLLYGELRKW 434
I +++ A++ D E K ++ + + S + K + I L ++ KW
Sbjct: 474 ISSNRKYTTALLFVDHERYTQHEKSSNLTIDEYFNQSRIQKSIQNHIDRLNKKVNKW 530
>gi|254226261|ref|ZP_04919854.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae V51]
gi|125621234|gb|EAZ49575.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae V51]
Length = 601
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 132/435 (30%), Positives = 207/435 (47%), Gaps = 55/435 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+
Sbjct: 173 EQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVF 232
Query: 80 ERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ERA ++ +G Y V ++++ L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLV 292
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
R+V+ F + C + Q+QPS++ L H LA
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------------LKQSHQLA 328
Query: 199 EKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 329 DKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDH 388
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
C S+G + ++KI E NE+L VRG VM+GY+K T ++ DE
Sbjct: 389 CFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLDKETAESFDEH 437
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
G+L TGD G I + G L + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 429
QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNDLQK 547
Query: 430 ELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFRLLP 562
>gi|296282950|ref|ZP_06860948.1| putative long-chain-fatty-acid--CoA ligase (long-chain acyl-CoA
synthetase) [Citromicrobium bathyomarinum JL354]
Length = 603
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 146/453 (32%), Positives = 212/453 (46%), Gaps = 80/453 (17%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE----NGDKFLSMLPPWH 77
IG D A +YTSGT G P+GV+ H +L + DI+ + N ++FLS LP H
Sbjct: 181 IGRRDTACIIYTSGTGGAPRGVLQHHGAILCNVAGAADILIDDFDLSNDERFLSFLPLSH 240
Query: 78 VYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 135
YE G F+ G ++ Y + L +++ P M+ VP ++E L + I KQI
Sbjct: 241 AYEHTGGQFLPIGVGAQIFYAEGLEKLASNIEETSPTVMVVVPRLFEVLRTRIMKQIAKQ 300
Query: 136 S-AARRVVARAL-IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
AA ++ RAL I A KR+ + P
Sbjct: 301 GGAASFLLDRALEIEERAAKKGKKRLRDK------------------------------P 330
Query: 194 LHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
+ L KL+ KI+ G KA VSGG L + +F++A+G+ + GYG TE+ PVI+
Sbjct: 331 MDALVGKLLRPKIRQKFGGRIKAMVSGGAPLNPDVGIFFQALGLPMMQGYGQTEAGPVIS 390
Query: 253 ARRPTCNV-LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 311
RP V + +VG P+ E+KI AE E+L RG VM GY++N T
Sbjct: 391 CNRPAAGVSMDTVGPPMKGVEVKI--AEDGEIL---------CRGELVMHGYWQNQGETD 439
Query: 312 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 371
+AL +DGWL+TGDIG + RGR +V+ R KD IV G+NV P +LE
Sbjct: 440 RAL-KDGWLHTGDIGHL---DERGR-------IVITDRKKDMIVNDKGDNVAPQKLEGML 488
Query: 372 LRSSLIRQIVVIGQDQRRP--GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISL--L 427
I Q +V+G RRP +IVPD E L ++ L +K + L
Sbjct: 489 TLQPEIGQAMVVG--DRRPYVVGLIVPDTEWA------LDWCNSQNKSLDCKKVLELPEF 540
Query: 428 YGELRKWTSKCSFQIGPIHVV------DEPFTV 454
E+RK + + ++ + V DEPF++
Sbjct: 541 RAEIRKAIDRVNAELSVVEKVRGFAFADEPFSI 573
>gi|269960935|ref|ZP_06175305.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio harveyi 1DA3]
gi|269834375|gb|EEZ88464.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio harveyi 1DA3]
Length = 602
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 128/431 (29%), Positives = 207/431 (48%), Gaps = 55/431 (12%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 83
+D+ T +YTSGTTG PKGVML + N+ Q+ + + D L LP HV+ERA
Sbjct: 177 EEDLLTLIYTSGTTGQPKGVMLDYANISAQLEGHDERLSLTEDDVSLCFLPLSHVFERAW 236
Query: 84 GYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
+++ +G Y ++D L +P M +VP YE ++S I +++ + R+++
Sbjct: 237 TFYVLYKGATNCYLQDTMQVRDALSEVRPTVMSAVPRFYEKIFSAIHEKVSRAPVHRKIM 296
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
+ + A + EG ++PS + L + LA+KLV
Sbjct: 297 FTWAVNMGAKMAACHQ--EG-------RKPSLM---------------LRKSYALADKLV 332
Query: 203 YKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++ C
Sbjct: 333 LSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDQCFDP 392
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
S+G + ++KI E NE+L VRG VM+GY+K P T++ DE G+L
Sbjct: 393 SSIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETEKTFDEHGFLK 441
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD G+I + G L + R K+ + S G+ + P +E A + I QI
Sbjct: 442 TGDAGYIDEN----------GNLFITDRIKELMKTSNGKYIAPQVVEGAIGKDHFIEQIA 491
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRK 433
VI ++ A+IVP + + AK L+I + D EL K EK ++ L EL K
Sbjct: 492 VIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQIVEMLEKRVNDLQKELAK 551
Query: 434 WTSKCSFQIGP 444
+ F++ P
Sbjct: 552 FEQVKKFKLLP 562
>gi|448440850|ref|ZP_21588848.1| AMP-dependent synthetase and ligase [Halorubrum saccharovorum DSM
1137]
gi|445689758|gb|ELZ41984.1| AMP-dependent synthetase and ligase [Halorubrum saccharovorum DSM
1137]
Length = 690
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 146/477 (30%), Positives = 214/477 (44%), Gaps = 82/477 (17%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV---PAENGD--------K 68
+ I D+A+ +YTSGTTG PKGV LTH N + Y P +GD
Sbjct: 221 DAIDVGDLASLIYTSGTTGQPKGVRLTHANFRENVNQCYRRFADRPDRDGDVPGISAEST 280
Query: 69 FLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYS 126
LS LP HV+ER G Y +F+ G + Y + L++D +P SVP VYE LY
Sbjct: 281 TLSFLPLAHVFERLAGHYMMFAAGATVGYAESPDTLREDFGLVRPTTTTSVPRVYEKLYD 340
Query: 127 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 186
I++Q S R+ A+ + R + AL+D A
Sbjct: 341 AIREQASESPVKERIFEWAV-----------------GVGRAHHEADRPGALLDAKRA-- 381
Query: 187 ICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 245
+A+KLV+ ++ AIG + +SGGGSL + Y A+ + + GYGLT
Sbjct: 382 ----------IADKLVFSSVREAIGGNVDFFISGGGSLSAELCALYHAMDLPILEGYGLT 431
Query: 246 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP--AGSKGIVKVRGSQVMQGY 303
E+SPVI P +G++G P+ TE+ I A E AG G + VRG QV GY
Sbjct: 432 ETSPVICVNPPEEPKVGTIGPPVVDTEVAIDGAVVGEEAADLAGDVGELLVRGPQVTDGY 491
Query: 304 FKNPSATKQAL------------------DEDG-----WLNTGDIGWIAPHHSRGRSRRC 340
+ P AT +A + DG W +TGDI + P
Sbjct: 492 WNRPDATAEAFTDPDRLPEDAVVAGTPPDERDGDPDEPWFHTGDIVQLRPD--------- 542
Query: 341 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 400
G + RAK +VLSTG+NV P +E+ + + Q VV+G ++ A+IVP+ E+
Sbjct: 543 -GYVAFRERAKQLLVLSTGKNVAPGPIEDRFAANEFVEQCVVLGDGRKFVSALIVPNFEK 601
Query: 401 VLMAAKRLSI-VHADASELSKEKTI-SLLYGELRKWTSKCS--FQIGPIHVVDEPFT 453
V A I + D E+ ++ + + E+ + + +I +VDE FT
Sbjct: 602 VDAWADARGIDLPDDRKEICRDDRVRERIQEEVDRVNEEFEPYERIKQFRIVDEEFT 658
>gi|417846422|ref|ZP_12492429.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M21639]
gi|341952560|gb|EGT79085.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M21639]
Length = 608
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 126/407 (30%), Positives = 192/407 (47%), Gaps = 47/407 (11%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 186 DLFTIIYTSGTTGEPKGVMLDYANLAHQLETHDLALNVTDQDISLSFLPFSHIFERAWAA 245
Query: 86 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 246 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 305
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
I + + F L N K +L L LA+KLV
Sbjct: 306 WAISVGQKH---------FDLRANNKAIPFL---------------LKKQFALADKLVLS 341
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 342 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 401
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
+G + E+KI E NE+L VRG VM+GY+K P T QA EDG+L TG
Sbjct: 402 IGTLMPKAEVKI--RENNEIL---------VRGGMVMKGYYKKPEETAQAFTEDGFLKTG 450
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 451 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 500
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
++ A+IVP + + AK+L+I + D EL K I ++ +
Sbjct: 501 ADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSEILKMFEQ 547
>gi|229846920|ref|ZP_04467026.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
7P49H1]
gi|229810004|gb|EEP45724.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
7P49H1]
Length = 599
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 193/407 (47%), Gaps = 47/407 (11%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 178 DLFTIIYTSGTTGEPKGVMLDYANLAHQLETHDLSLNVTDQDISLSFLPFSHIFERAWAA 237
Query: 86 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 238 YILHRGTILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 297
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
I + + F L N K +I +L LA+KLV
Sbjct: 298 WAISVGQKH---------FDLRTNNK---------------VIPFLLKKQFALADKLVLS 333
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 334 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 393
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
+G + E+KI E NE+L VRG VM+GY+K P T QA EDG+L TG
Sbjct: 394 IGTLMPKAEVKI--GENNEIL---------VRGGMVMKGYYKKPEETAQAFTEDGFLKTG 442
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 443 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 492
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
++ A+IVP + + AK+++I + D EL K I ++ +
Sbjct: 493 ADAKKYVSALIVPCFDSLEEYAKQINIKYHDRLELLKNSDILKMFEQ 539
>gi|227114206|ref|ZP_03827862.1| putative AMP-binding protein [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 601
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 207/437 (47%), Gaps = 54/437 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+D+ T +YTSGTTG PKGVML + N+ Q++ D + D L LP HV+ERA
Sbjct: 181 NDLFTLIYTSGTTGEPKGVMLDYTNMAMQLKLHDDRLDMSENDVSLCFLPLSHVFERAWS 240
Query: 85 YFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR-RVV 142
+ I RG + +Y NL ++ +Q +P M +VP YE +YS I +++ + R R+
Sbjct: 241 FVIMHRGAQNVYLNNTNLVREAMQTVKPTVMCAVPRFYEKVYSAIHEKVAQAPWYRQRLF 300
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
A+ + +A+ A + +G R +H A++LV
Sbjct: 301 NWAIAQGQYAFLASQTAKKGGLFRR-------------------------VMHHYADRLV 335
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
K++ +G + + G L +I LF+ +IG+++ GYG+TE+ ++ L
Sbjct: 336 LGKLRQLLGGEIRFMPAAGARLDDNIILFFRSIGIRIIYGYGMTETCATVSCWEEGRFRL 395
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
GS+G P+ E++I G + ++VRG+ +M+GYF P T EDGWL
Sbjct: 396 GSIGTPLPGIEVRI-----------GEEKEIQVRGATIMRGYFHRPQETADTFTEDGWLK 444
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD G + G L + R KD + S G+ + P LE + I Q+
Sbjct: 445 TGDAGELD----------ANGNLFITERLKDLMKTSGGKYIAPQHLEGTLGQDRFIEQVA 494
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYG----ELRKWTSK 437
+I ++ A+IVP E + A +++ + D EL + I L+ E++K S+
Sbjct: 495 IIADTRKYVSALIVPCFEALEEYAHSINLKYHDRLELLRHSHIIELFEQRLREIQKELSR 554
Query: 438 CSFQIGPIHVVDEPFTV 454
Q+ ++ PF++
Sbjct: 555 VE-QVKKFTLLPVPFSM 570
>gi|229527090|ref|ZP_04416485.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae 12129(1)]
gi|229335487|gb|EEO00969.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae 12129(1)]
Length = 601
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 131/435 (30%), Positives = 207/435 (47%), Gaps = 55/435 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+
Sbjct: 173 EQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVF 232
Query: 80 ERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ERA ++ +G Y V ++++ L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLV 292
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
R+V+ F + C + Q+QPS++ L H A
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------------LKQSHQFA 328
Query: 199 EKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 329 DKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDH 388
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
C S+G + ++KI E NE+L VRG VM+GY+K T ++ DE
Sbjct: 389 CFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLDKETAESFDEH 437
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
G+L TGD G I + G L + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 429
QI VI ++ A+IVP + + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCFDSLEVYAKELNIKYQDRLELLKHSQVLEMFEKRVNDLQK 547
Query: 430 ELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFRLLP 562
>gi|407069899|ref|ZP_11100737.1| long-chain-fatty-acid--CoA ligase [Vibrio cyclitrophicus ZF14]
Length = 602
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 204/430 (47%), Gaps = 55/430 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+ T +YTSGTTG PKGVML + N+ +Q++ + + D L LP HV+ERA
Sbjct: 178 DDLLTLIYTSGTTGQPKGVMLDYTNIGYQLKGHDERLSLTKDDVSLCFLPLSHVFERAWT 237
Query: 85 YFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
++ +G Y ++D L +P M +VP YE ++S I +++ + R+V+
Sbjct: 238 FYALYKGATNCYLQDTMQVRDALSDVKPTVMCAVPRFYEKIFSAIHEKVSKAPFIRKVLF 297
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
+ + + + EG + PS++ L H LA+KLV
Sbjct: 298 TWAVNMGAKLSVCHQ--EG-------RTPSFM---------------LKKSHALADKLVL 333
Query: 204 KKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K+++ +G + + GG L I F+ AIG+ V++GYG+TE++ ++ C
Sbjct: 334 SKLRALLGGNINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDRCFNPD 393
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G + E+KI G+K + VRG VM+GY+K P T DE G+L T
Sbjct: 394 SIGMSMPGAEVKI-----------GAKDEILVRGPMVMRGYYKMPEETANTFDEHGFLKT 442
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD G + G L + R K+ + S G+ + P +E A + I QI V
Sbjct: 443 GDAGHFDEN----------GNLFITDRIKELMKTSGGKYIAPQVVEGAIGKDHFIEQIAV 492
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 434
I ++ A+IVP + + AK L+I + D EL K EK ++ L EL K+
Sbjct: 493 IADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELVKHHQIIEMLEKRVNNLQQELAKF 552
Query: 435 TSKCSFQIGP 444
F++ P
Sbjct: 553 EQVKKFKLLP 562
>gi|406576196|ref|ZP_11051861.1| long-chain-fatty-acid--CoA ligase [Janibacter hoylei PVAS-1]
gi|404554395|gb|EKA59932.1| long-chain-fatty-acid--CoA ligase [Janibacter hoylei PVAS-1]
Length = 579
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 188/387 (48%), Gaps = 51/387 (13%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD---IVPAENGDKFLSMLP 74
+ + + DD+A VYTSGTTG PKGV+LTH++L ++ D G + L LP
Sbjct: 168 RRDAVTLDDLAGIVYTSGTTGRPKGVVLTHRHLAAEVAGCLDHPIGSVGRPGRRILIFLP 227
Query: 75 PWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 133
HV R+ Y G + + A ++ D L ++PH ++ VP V+E ++ G++ Q
Sbjct: 228 MAHVLARSVAYIAAQSGATVGFWADFGSIVDKLGSFRPHMVVGVPRVFEKVHDGVRSQ-- 285
Query: 134 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
++ +RV A + A R + + +PS + L
Sbjct: 286 --ASGQRVSAVVFTKGEQVALACSR-----AIGEGEGRPSLPLRLA-------------- 324
Query: 194 LHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
H + ++L+Y K+++A+G V SGGG+L + F+ +GV V GYGLTE+ I
Sbjct: 325 -HAVFDRLLYTKVRAALGGEMEYVISGGGALGERLGHFFRGVGVPVHEGYGLTETCAAIT 383
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
P +G+VG P+ E+++ D G + VRG+ V GY+ N AT++
Sbjct: 384 VNGPGVQRVGTVGRPLPGNEVRVAD-----------DGAISVRGAVVTDGYWGNDEATRE 432
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
A+ DGW TGD+G + G L + GRAK+ IV + G+NV P LE+
Sbjct: 433 AI-VDGWFATGDLGTLDDD----------GYLTITGRAKEIIVTAGGKNVSPGPLEDVLR 481
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKE 399
L+ Q +V+G + GA+I D E
Sbjct: 482 THPLVSQAMVVGDGRPFVGALITLDPE 508
>gi|378696081|ref|YP_005178039.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
10810]
gi|301168604|emb|CBW28193.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
10810]
Length = 599
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 126/407 (30%), Positives = 192/407 (47%), Gaps = 47/407 (11%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 178 DLFTIIYTSGTTGEPKGVMLDYANLSHQLETHDLSLNVTDQDISLSFLPFSHIFERAWAA 237
Query: 86 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 238 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 297
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
I + + F L N K +L L LA+KLV
Sbjct: 298 WAISVGQKH---------FDLRANNKDIPFL---------------LKKQFALADKLVLS 333
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 334 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHNFQFNPNS 393
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
+G + E+KI E NE+L VRG VM+GY+K P T QA EDG+L TG
Sbjct: 394 IGTLMPKAEVKI--GENNEIL---------VRGGMVMKGYYKKPEETAQAFTEDGFLKTG 442
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 443 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 492
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
++ A+IVP + + AK+L+I + D EL K I ++ +
Sbjct: 493 ADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSDILKMFEQ 539
>gi|229514108|ref|ZP_04403570.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae TMA 21]
gi|229349289|gb|EEO14246.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae TMA 21]
Length = 601
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 131/435 (30%), Positives = 207/435 (47%), Gaps = 55/435 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E DD+ T +YTSGTTG PKGVML ++N+ Q+ + + D L LP HV+
Sbjct: 173 EQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDERLNLTQEDVSLCFLPLSHVF 232
Query: 80 ERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ERA ++ +G Y V ++++ L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLV 292
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
R+V+ F + C + Q+QPS++ L H A
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------------LKQSHQFA 328
Query: 199 EKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 329 DKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDH 388
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
C S+G + ++KI E NE+L VRG VM+GY+K T ++ DE
Sbjct: 389 CFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLDKETTESFDEQ 437
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
G+L TGD G I + G L + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 429
QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNELQK 547
Query: 430 ELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFRLLP 562
>gi|260582084|ref|ZP_05849879.1| long-chain acyl-CoA synthetase [Haemophilus influenzae NT127]
gi|260094974|gb|EEW78867.1| long-chain acyl-CoA synthetase [Haemophilus influenzae NT127]
Length = 599
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 126/407 (30%), Positives = 192/407 (47%), Gaps = 47/407 (11%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 178 DLFTIIYTSGTTGEPKGVMLDYANLAHQLETHDLSLNVTDQDISLSFLPFSHIFERAWAA 237
Query: 86 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 238 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 297
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
I + + F L N K +L L LA+KLV
Sbjct: 298 WAISVGQKH---------FDLRANNKAIPFL---------------LKKQFALADKLVLS 333
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 334 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 393
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
+G + E+KI E NE+L VRG VM+GY+K P T QA EDG+L TG
Sbjct: 394 IGTLMPKAEVKI--GENNEIL---------VRGGMVMKGYYKKPEETAQAFTEDGFLKTG 442
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 443 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 492
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
++ A+IVP + + AK+L+I + D EL K I ++ +
Sbjct: 493 ADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSDILKMFEQ 539
>gi|292492511|ref|YP_003527950.1| AMP-dependent synthetase and ligase [Nitrosococcus halophilus Nc4]
gi|291581106|gb|ADE15563.1| AMP-dependent synthetase and ligase [Nitrosococcus halophilus Nc4]
Length = 600
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 137/407 (33%), Positives = 200/407 (49%), Gaps = 57/407 (14%)
Query: 10 PVIAGKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKF 69
P A K Y E+ D +AT VYTSGTTG PKGVML+H+N+L S P D F
Sbjct: 168 PETADKFYP-ESADPDALATIVYTSGTTGAPKGVMLSHRNILWNAYSSLQRSPVYPDDLF 226
Query: 70 LSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSG 127
LS LP H ER GY++ G + Y ++ L +DL +P ++SVP ++E
Sbjct: 227 LSFLPLSHALERTLGYYLPMMAGACVTYARSITKLAEDLVTIKPTALVSVPRIFER---- 282
Query: 128 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 187
I+ Q+ R + RAL R++ A G+ Q+ +Y W
Sbjct: 283 IRNQLHHELQERTPLERALFRLTVA--------AGWRQFNYQQGQAY--------WH--- 323
Query: 188 CAILWPLHLLA---EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 243
PL LLA + LV +++ + +G + V GG L + A+G+ + GYG
Sbjct: 324 -----PLCLLAPLLQPLVGRRVLAQLGGRLRVVVCGGAPLAFGVSRELLALGLPLIQGYG 378
Query: 244 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 303
LTE+SPVI+ N SVG P+ E++I E NE+L VR VM GY
Sbjct: 379 LTEASPVISGNSLDKNDPKSVGTPLQDVEVRI--GEHNELL---------VRSPGVMLGY 427
Query: 304 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 363
+ NP AT + +D++GWL+TGD ++R G + + GR K+ IVL+ GE +
Sbjct: 428 WDNPKATAKTIDQEGWLHTGD-----------QARIEQGRIYITGRIKEIIVLANGEKIP 476
Query: 364 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 410
P E+E A L Q++VIG+ + A+IV + E A L++
Sbjct: 477 PGEMEAAIGADHLFDQVMVIGEGKPYLSALIVLNPEHWTKFAHDLNL 523
>gi|393786196|ref|ZP_10374332.1| hypothetical protein HMPREF1068_00612 [Bacteroides nordii
CL02T12C05]
gi|392659825|gb|EIY53442.1| hypothetical protein HMPREF1068_00612 [Bacteroides nordii
CL02T12C05]
Length = 601
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 132/442 (29%), Positives = 206/442 (46%), Gaps = 56/442 (12%)
Query: 23 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM--LPPWHVYE 80
DD+A +YTSGTTG PKGVML H L R ++DI + D+ +SM LP HV+E
Sbjct: 178 SEDDLANILYTSGTTGEPKGVMLHHSCFLEAFR-IHDIRLVDMTDEDVSMNFLPLTHVFE 236
Query: 81 RACGYFIFSRGIELMYTAV-RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
+A Y +G+++ +++ ++ +P M SVP +E +Y+G+Q++I ++ +
Sbjct: 237 KAWSYLCIYKGVQICVNLRPADIQMTIKEIRPTLMCSVPRFWEKVYAGVQEKIAETTGIK 296
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + IR+ RI+ R K P ++ L + E
Sbjct: 297 KTLMMDAIRVG-------RIH-NIDYIRQGKTPPLMLHL---------------KYKFYE 333
Query: 200 KLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
K +Y ++ IGI + G ++P I F ++G+ + VGYGLTES+ ++ T
Sbjct: 334 KTIYSLLKKTIGIENGNFFPTAGAAVPDEICEFVHSVGIDMLVGYGLTESTATVSCTSKT 393
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
+GSVG + E+KI E NE+L +RG + +GY+K AT +D D
Sbjct: 394 GYDIGSVGQVMPDVEVKI--GEDNEIL---------LRGKTITKGYYKKAEATAATIDAD 442
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GW +TGD G+ G L L R KD S G+ + P LE + I
Sbjct: 443 GWFHTGDAGYFK-----------NGQLYLTERIKDLFKTSNGKYIAPQALETKLVIDRYI 491
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 437
QI +I ++ A+IVP V AK I + D EL + I L+ R T +
Sbjct: 492 DQIAIIADQRKFVSALIVPVYGFVKDYAKEKGIEYKDMEELLQHPKIVGLF-RARIDTLQ 550
Query: 438 CSF----QIGPIHVVDEPFTVN 455
F QI ++ EPF++
Sbjct: 551 QQFANYEQIKRFTLLPEPFSME 572
>gi|397645912|gb|EJK77039.1| hypothetical protein THAOC_01158 [Thalassiosira oceanica]
Length = 695
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 137/457 (29%), Positives = 221/457 (48%), Gaps = 76/457 (16%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLL---HQIRSLYDIVPAE---NGDKFLSMLPPWHV 78
+D+A +YTSGTTG PKGV LTH N + + +R + D P + + D+ L+ LP H
Sbjct: 245 EDLAGLIYTSGTTGKPKGVELTHDNFVSNVYAVRGMADD-PRDFIRSSDRSLAFLPWAHS 303
Query: 79 YERAC---------GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQ 129
Y + C G RG+ L+ +DL +P + +VP +Y+ +Y G+Q
Sbjct: 304 YGQTCELWCAISHGGSMGVCRGVPLIL-------EDLALVKPTVLFAVPTLYKKVYDGVQ 356
Query: 130 KQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICA 189
I +SS ++ + RA + L R +K+ + L++ L R++
Sbjct: 357 NLIGSSSPTKQKLMRAALD----------------LGRKKKESGGSLGLVEGLKHRVL-- 398
Query: 190 ILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESS 248
+ LV KI+ G + + G G + P I F + IG+ + GYGLTE+S
Sbjct: 399 ---------DGLVTSKIRDRFGGNLRHGFVAGAACPKEILDFMDDIGITICEGYGLTETS 449
Query: 249 PVIAARRP--TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKN 306
P+IA P LG VG P++ E+ I+D +TN+ +P+G +G + G VM+GY++N
Sbjct: 450 PIIAINAPYEGKRKLGHVGKPVDGVEVVIIDPDTNQEVPSGQEGEICCYGRNVMRGYYRN 509
Query: 307 PSATKQALD--EDG---WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 361
P AT + + DG +TGD+G ++ G + + GR K+ L G+
Sbjct: 510 PEATAEVISVAPDGKSRLFHTGDMGNLSED----------GFVAVTGRLKEQYKLENGKY 559
Query: 362 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE---L 418
V P +EE+ S I Q VV G ++ A+IVPD +A + + DASE +
Sbjct: 560 VVPTPIEESITMSRFIAQTVVCGANREHNVALIVPD----WVAIRSTLNIADDASEDDLV 615
Query: 419 SKEKTISLLYGELRKWTSKC-SFQIGPIHVVDEPFTV 454
+ + L+ E+R T K +++ + PFTV
Sbjct: 616 NNPEVRGLMDEEIRVNTYKLKKYEVPQMWAFVAPFTV 652
>gi|225352623|ref|ZP_03743646.1| hypothetical protein BIFPSEUDO_04249 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225156817|gb|EEG70211.1| hypothetical protein BIFPSEUDO_04249 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 607
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 129/456 (28%), Positives = 223/456 (48%), Gaps = 65/456 (14%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS----LYDIVPAENGDKFLSML 73
+ +++ +DD+AT VYTSG+TG PKG L+H+N + R+ L++IV E+ + L L
Sbjct: 175 RIDSVHADDLATIVYTSGSTGAPKGAELSHRNFISITRAGSLALHEIV-LEDHPRLLLFL 233
Query: 74 PPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P H + R Y + G+ + L DL+ ++P Y++ VP V+E +Y+ ++
Sbjct: 234 PLAHCFARFIQYASIASDDGVVGYLPDTKTLLPDLRSFEPTYLLGVPRVFEKVYNAASRK 293
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
T R ++ + A + R+ + ++P+ A+ I
Sbjct: 294 AGTGWKGR-----LFLKAAEAARDWSRMQQA------GERPT----------AKQIAQ-- 330
Query: 192 WPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGYGLTESSP 249
HL E VY+ ++SA+G V+ GG+ P+ + L F+ IG+ + GYG+TE++
Sbjct: 331 ---HLSYEASVYRTVRSALGPRIRYVACGGA-PLDVSLAHFFNGIGLPMIQGYGMTETAA 386
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
AA R T NV+G+VG P + ++I D G ++V+G V +GY P
Sbjct: 387 PFAATRVTDNVIGTVGQPAPGSSVRISD-----------DGELQVKGPNVFRGYHNLPEK 435
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T +A EDGWL TGD+ I G + + GR KD I+ + G+NV P+ +E+
Sbjct: 436 TAEAFTEDGWLKTGDLASIDDE----------GRITITGRKKDIIITAGGKNVSPIPMEQ 485
Query: 370 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYG 429
++ ++ +VV+G ++ GA+I D E + A SI + + L + + ++
Sbjct: 486 EIVKCPIVEHVVVVGDNRPFIGALITLDPEG--LEAWLPSIGLSADTPLDRVAATAAVHD 543
Query: 430 ELRKWTSKCSFQIGPIH------VVDEPFTVNFLCL 459
E++K+ K + + V+D FT CL
Sbjct: 544 EIQKYVDKANATVSRAESVRKFVVLDTQFTQENKCL 579
>gi|430760345|ref|YP_007216202.1| Long-chain-fatty-acid--CoA ligase [Thioalkalivibrio nitratireducens
DSM 14787]
gi|430009969|gb|AGA32721.1| Long-chain-fatty-acid--CoA ligase [Thioalkalivibrio nitratireducens
DSM 14787]
Length = 633
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 121/394 (30%), Positives = 192/394 (48%), Gaps = 53/394 (13%)
Query: 5 LPILTPVIAGKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE 64
LP + +A H + E + A+ VYTSGTTG PKGVML+H+N L +++ V
Sbjct: 191 LPDVAGEVAHGHTRPEAL-----ASIVYTSGTTGPPKGVMLSHRNFLFNVQACLRAVQVS 245
Query: 65 NGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYE 122
+ D+ LS LP H ER GY+ + G+ + Y ++ L +DL +P +++VP ++E
Sbjct: 246 SRDRMLSFLPLSHALERTVGYYTPIAAGMTVAYARSISQLAEDLLTVRPTILVAVPRIFE 305
Query: 123 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 182
I +++ R+ + FA+T +E F + + + + L
Sbjct: 306 RAQERILERVEAGPRLRQRL--------FAWT-LASGWEAFLHEQGRGRRRWSDGL---- 352
Query: 183 WARIICAILWPLH-LLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVG 241
LH LL + + G + +SGG LP + F+ ++GV + G
Sbjct: 353 -----------LHPLLDRLVARRVRVRFGGRLRFAISGGAPLPEAVGRFFLSLGVPIVQG 401
Query: 242 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 301
YGLTE+SPVI+ R N +VG + E+++ GS+ + R VM
Sbjct: 402 YGLTETSPVISVNRLEDNEPTTVGPALPGVEVRV-----------GSQSELLTRSPSVMM 450
Query: 302 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 361
GY+ NP AT+Q +D D W +TGD I P G + + GR KD +VLS GE
Sbjct: 451 GYWNNPDATRQVIDGDHWFHTGDRACIGPR----------GHITITGRLKDILVLSNGEK 500
Query: 362 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 395
V P ++E+A S L+ Q++V+G + GA++V
Sbjct: 501 VAPADVEQALAGSPLVEQVLVVGDSRPYLGALVV 534
>gi|22127515|ref|NP_670938.1| fatty acid biosynthesis protein [Yersinia pestis KIM10+]
gi|45443377|ref|NP_994916.1| AMP-binding protein [Yersinia pestis biovar Microtus str. 91001]
gi|51595024|ref|YP_069215.1| AMP-binding protein [Yersinia pseudotuberculosis IP 32953]
gi|108809552|ref|YP_653468.1| AMP-binding protein [Yersinia pestis Antiqua]
gi|108810571|ref|YP_646338.1| AMP-binding enzyme-family protein [Yersinia pestis Nepal516]
gi|145600359|ref|YP_001164435.1| AMP-binding enzyme-family protein [Yersinia pestis Pestoides F]
gi|150260427|ref|ZP_01917155.1| putative AMP-binding enzyme-family protein [Yersinia pestis
CA88-4125]
gi|167401298|ref|ZP_02306798.1| AMP binding protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167469510|ref|ZP_02334214.1| AMP-binding enzyme-family protein [Yersinia pestis FV-1]
gi|186894030|ref|YP_001871142.1| AMP-dependent synthetase and ligase [Yersinia pseudotuberculosis
PB1/+]
gi|218927734|ref|YP_002345609.1| AMP-binding protein [Yersinia pestis CO92]
gi|229837070|ref|ZP_04457235.1| putative AMP-binding enzyme-family protein [Yersinia pestis
Pestoides A]
gi|229840427|ref|ZP_04460586.1| putative AMP-binding enzyme-family protein [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229843031|ref|ZP_04463181.1| putative AMP-binding enzyme-family protein [Yersinia pestis biovar
Orientalis str. India 195]
gi|229900762|ref|ZP_04515886.1| putative AMP-binding enzyme-family protein [Yersinia pestis
Nepal516]
gi|384137474|ref|YP_005520176.1| putative AMP-binding enzyme family protein [Yersinia pestis A1122]
gi|384416401|ref|YP_005625763.1| AMP-binding protein [Yersinia pestis biovar Medievalis str. Harbin
35]
gi|420545020|ref|ZP_15043194.1| AMP-binding enzyme family protein [Yersinia pestis PY-01]
gi|420550334|ref|ZP_15047944.1| AMP-binding enzyme family protein [Yersinia pestis PY-02]
gi|420555787|ref|ZP_15052795.1| AMP-binding enzyme family protein [Yersinia pestis PY-03]
gi|420561464|ref|ZP_15057743.1| AMP-binding enzyme family protein [Yersinia pestis PY-04]
gi|420566471|ref|ZP_15062259.1| AMP-binding enzyme family protein [Yersinia pestis PY-05]
gi|420572138|ref|ZP_15067409.1| AMP-binding enzyme family protein [Yersinia pestis PY-06]
gi|420582818|ref|ZP_15077101.1| AMP-binding enzyme family protein [Yersinia pestis PY-08]
gi|420587923|ref|ZP_15081705.1| AMP-binding enzyme family protein [Yersinia pestis PY-09]
gi|420593235|ref|ZP_15086488.1| AMP-binding enzyme family protein [Yersinia pestis PY-10]
gi|420598921|ref|ZP_15091580.1| AMP-binding enzyme family protein [Yersinia pestis PY-11]
gi|420604497|ref|ZP_15096554.1| AMP-binding enzyme family protein [Yersinia pestis PY-12]
gi|420609782|ref|ZP_15101353.1| AMP-binding enzyme family protein [Yersinia pestis PY-13]
gi|420615044|ref|ZP_15106032.1| AMP-binding enzyme family protein [Yersinia pestis PY-14]
gi|420620500|ref|ZP_15110796.1| AMP-binding enzyme family protein [Yersinia pestis PY-15]
gi|420625532|ref|ZP_15115359.1| AMP-binding enzyme family protein [Yersinia pestis PY-16]
gi|420630690|ref|ZP_15120043.1| AMP-binding enzyme family protein [Yersinia pestis PY-19]
gi|420635875|ref|ZP_15124675.1| AMP-binding enzyme family protein [Yersinia pestis PY-25]
gi|420641460|ref|ZP_15129713.1| AMP-binding enzyme family protein [Yersinia pestis PY-29]
gi|420646547|ref|ZP_15134377.1| AMP-binding enzyme family protein [Yersinia pestis PY-32]
gi|420652230|ref|ZP_15139474.1| AMP-binding enzyme family protein [Yersinia pestis PY-34]
gi|420657678|ref|ZP_15144390.1| AMP-binding enzyme family protein [Yersinia pestis PY-36]
gi|420663015|ref|ZP_15149150.1| AMP-binding enzyme family protein [Yersinia pestis PY-42]
gi|420668037|ref|ZP_15153693.1| AMP-binding enzyme family protein [Yersinia pestis PY-45]
gi|420673306|ref|ZP_15158487.1| AMP-binding enzyme family protein [Yersinia pestis PY-46]
gi|420678810|ref|ZP_15163495.1| AMP-binding enzyme family protein [Yersinia pestis PY-47]
gi|420684045|ref|ZP_15168199.1| AMP-binding enzyme family protein [Yersinia pestis PY-48]
gi|420689220|ref|ZP_15172794.1| AMP-binding enzyme family protein [Yersinia pestis PY-52]
gi|420695043|ref|ZP_15177883.1| AMP-binding enzyme family protein [Yersinia pestis PY-53]
gi|420700318|ref|ZP_15182477.1| AMP-binding enzyme family protein [Yersinia pestis PY-54]
gi|420706458|ref|ZP_15187366.1| AMP-binding enzyme family protein [Yersinia pestis PY-55]
gi|420711740|ref|ZP_15192153.1| AMP-binding enzyme family protein [Yersinia pestis PY-56]
gi|420717110|ref|ZP_15196904.1| AMP-binding enzyme family protein [Yersinia pestis PY-58]
gi|420722753|ref|ZP_15201715.1| AMP-binding enzyme family protein [Yersinia pestis PY-59]
gi|420728388|ref|ZP_15206728.1| AMP-binding enzyme family protein [Yersinia pestis PY-60]
gi|420733504|ref|ZP_15211337.1| AMP-binding enzyme family protein [Yersinia pestis PY-61]
gi|420738945|ref|ZP_15216250.1| AMP-binding enzyme family protein [Yersinia pestis PY-63]
gi|420744173|ref|ZP_15220912.1| AMP-binding enzyme family protein [Yersinia pestis PY-64]
gi|420750096|ref|ZP_15225911.1| AMP-binding enzyme family protein [Yersinia pestis PY-65]
gi|420755178|ref|ZP_15230426.1| AMP-binding enzyme family protein [Yersinia pestis PY-66]
gi|420761232|ref|ZP_15235264.1| AMP-binding enzyme family protein [Yersinia pestis PY-71]
gi|420766406|ref|ZP_15239947.1| AMP-binding enzyme family protein [Yersinia pestis PY-72]
gi|420771448|ref|ZP_15244459.1| AMP-binding enzyme family protein [Yersinia pestis PY-76]
gi|420776756|ref|ZP_15249244.1| AMP-binding enzyme family protein [Yersinia pestis PY-88]
gi|420782266|ref|ZP_15254076.1| AMP-binding enzyme family protein [Yersinia pestis PY-89]
gi|420787696|ref|ZP_15258841.1| AMP-binding enzyme family protein [Yersinia pestis PY-90]
gi|420793160|ref|ZP_15263766.1| AMP-binding enzyme family protein [Yersinia pestis PY-91]
gi|420798314|ref|ZP_15268393.1| AMP-binding enzyme family protein [Yersinia pestis PY-92]
gi|420803697|ref|ZP_15273239.1| AMP-binding enzyme family protein [Yersinia pestis PY-93]
gi|420808871|ref|ZP_15277923.1| AMP-binding enzyme family protein [Yersinia pestis PY-94]
gi|420814663|ref|ZP_15283110.1| AMP-binding enzyme family protein [Yersinia pestis PY-95]
gi|420819812|ref|ZP_15287780.1| AMP-binding enzyme family protein [Yersinia pestis PY-96]
gi|420824891|ref|ZP_15292321.1| AMP-binding enzyme family protein [Yersinia pestis PY-98]
gi|420830684|ref|ZP_15297549.1| AMP-binding enzyme family protein [Yersinia pestis PY-99]
gi|420835490|ref|ZP_15301881.1| AMP-binding enzyme family protein [Yersinia pestis PY-100]
gi|420840652|ref|ZP_15306562.1| AMP-binding enzyme family protein [Yersinia pestis PY-101]
gi|420846242|ref|ZP_15311620.1| AMP-binding enzyme family protein [Yersinia pestis PY-102]
gi|420851582|ref|ZP_15316374.1| AMP-binding enzyme family protein [Yersinia pestis PY-103]
gi|420857161|ref|ZP_15321079.1| AMP-binding enzyme family protein [Yersinia pestis PY-113]
gi|421761966|ref|ZP_16198766.1| AMP-binding protein [Yersinia pestis INS]
gi|21960614|gb|AAM87189.1|AE013966_6 putative fatty acid biosynthesis protein [Yersinia pestis KIM10+]
gi|45438246|gb|AAS63793.1| putative AMP-binding enzyme-family protein [Yersinia pestis biovar
Microtus str. 91001]
gi|51588306|emb|CAH19914.1| putative AMP-binding enzyme-family protein [Yersinia
pseudotuberculosis IP 32953]
gi|108774219|gb|ABG16738.1| AMP-binding enzyme-family protein [Yersinia pestis Nepal516]
gi|108781465|gb|ABG15523.1| putative AMP-binding enzyme-family protein [Yersinia pestis
Antiqua]
gi|115346345|emb|CAL19217.1| putative AMP-binding enzyme-family protein [Yersinia pestis CO92]
gi|145212055|gb|ABP41462.1| AMP-binding enzyme-family protein [Yersinia pestis Pestoides F]
gi|149289835|gb|EDM39912.1| putative AMP-binding enzyme-family protein [Yersinia pestis
CA88-4125]
gi|167049323|gb|EDR60731.1| AMP binding protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|186697056|gb|ACC87685.1| AMP-dependent synthetase and ligase [Yersinia pseudotuberculosis
PB1/+]
gi|229682101|gb|EEO78193.1| putative AMP-binding enzyme-family protein [Yersinia pestis
Nepal516]
gi|229689907|gb|EEO81966.1| putative AMP-binding enzyme-family protein [Yersinia pestis biovar
Orientalis str. India 195]
gi|229696793|gb|EEO86840.1| putative AMP-binding enzyme-family protein [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229706013|gb|EEO92022.1| putative AMP-binding enzyme-family protein [Yersinia pestis
Pestoides A]
gi|320016905|gb|ADW00477.1| putative AMP-binding enzyme-family protein [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|342852603|gb|AEL71156.1| putative AMP-binding enzyme family protein [Yersinia pestis A1122]
gi|391432113|gb|EIQ93589.1| AMP-binding enzyme family protein [Yersinia pestis PY-01]
gi|391433167|gb|EIQ94530.1| AMP-binding enzyme family protein [Yersinia pestis PY-02]
gi|391435766|gb|EIQ96791.1| AMP-binding enzyme family protein [Yersinia pestis PY-03]
gi|391448197|gb|EIR08035.1| AMP-binding enzyme family protein [Yersinia pestis PY-04]
gi|391448895|gb|EIR08667.1| AMP-binding enzyme family protein [Yersinia pestis PY-05]
gi|391451533|gb|EIR11019.1| AMP-binding enzyme family protein [Yersinia pestis PY-06]
gi|391465843|gb|EIR23991.1| AMP-binding enzyme family protein [Yersinia pestis PY-08]
gi|391467875|gb|EIR25809.1| AMP-binding enzyme family protein [Yersinia pestis PY-09]
gi|391481271|gb|EIR37826.1| AMP-binding enzyme family protein [Yersinia pestis PY-10]
gi|391482068|gb|EIR38548.1| AMP-binding enzyme family protein [Yersinia pestis PY-12]
gi|391482202|gb|EIR38664.1| AMP-binding enzyme family protein [Yersinia pestis PY-11]
gi|391496452|gb|EIR51400.1| AMP-binding enzyme family protein [Yersinia pestis PY-13]
gi|391496986|gb|EIR51887.1| AMP-binding enzyme family protein [Yersinia pestis PY-15]
gi|391500587|gb|EIR55077.1| AMP-binding enzyme family protein [Yersinia pestis PY-14]
gi|391512101|gb|EIR65445.1| AMP-binding enzyme family protein [Yersinia pestis PY-16]
gi|391513827|gb|EIR67003.1| AMP-binding enzyme family protein [Yersinia pestis PY-19]
gi|391515786|gb|EIR68742.1| AMP-binding enzyme family protein [Yersinia pestis PY-25]
gi|391527621|gb|EIR79521.1| AMP-binding enzyme family protein [Yersinia pestis PY-29]
gi|391530383|gb|EIR81965.1| AMP-binding enzyme family protein [Yersinia pestis PY-34]
gi|391531818|gb|EIR83278.1| AMP-binding enzyme family protein [Yersinia pestis PY-32]
gi|391544753|gb|EIR94930.1| AMP-binding enzyme family protein [Yersinia pestis PY-36]
gi|391546312|gb|EIR96317.1| AMP-binding enzyme family protein [Yersinia pestis PY-42]
gi|391547089|gb|EIR97021.1| AMP-binding enzyme family protein [Yersinia pestis PY-45]
gi|391560924|gb|EIS09511.1| AMP-binding enzyme family protein [Yersinia pestis PY-46]
gi|391562030|gb|EIS10489.1| AMP-binding enzyme family protein [Yersinia pestis PY-47]
gi|391564074|gb|EIS12318.1| AMP-binding enzyme family protein [Yersinia pestis PY-48]
gi|391576223|gb|EIS22813.1| AMP-binding enzyme family protein [Yersinia pestis PY-52]
gi|391576897|gb|EIS23389.1| AMP-binding enzyme family protein [Yersinia pestis PY-53]
gi|391588442|gb|EIS33471.1| AMP-binding enzyme family protein [Yersinia pestis PY-55]
gi|391591017|gb|EIS35651.1| AMP-binding enzyme family protein [Yersinia pestis PY-54]
gi|391592228|gb|EIS36684.1| AMP-binding enzyme family protein [Yersinia pestis PY-56]
gi|391605408|gb|EIS48299.1| AMP-binding enzyme family protein [Yersinia pestis PY-60]
gi|391606856|gb|EIS49534.1| AMP-binding enzyme family protein [Yersinia pestis PY-58]
gi|391607670|gb|EIS50245.1| AMP-binding enzyme family protein [Yersinia pestis PY-59]
gi|391619729|gb|EIS60965.1| AMP-binding enzyme family protein [Yersinia pestis PY-61]
gi|391620669|gb|EIS61801.1| AMP-binding enzyme family protein [Yersinia pestis PY-63]
gi|391628887|gb|EIS68892.1| AMP-binding enzyme family protein [Yersinia pestis PY-64]
gi|391631216|gb|EIS70875.1| AMP-binding enzyme family protein [Yersinia pestis PY-65]
gi|391642571|gb|EIS80829.1| AMP-binding enzyme family protein [Yersinia pestis PY-71]
gi|391645313|gb|EIS83204.1| AMP-binding enzyme family protein [Yersinia pestis PY-72]
gi|391647623|gb|EIS85234.1| AMP-binding enzyme family protein [Yersinia pestis PY-66]
gi|391655007|gb|EIS91790.1| AMP-binding enzyme family protein [Yersinia pestis PY-76]
gi|391661827|gb|EIS97834.1| AMP-binding enzyme family protein [Yersinia pestis PY-88]
gi|391666695|gb|EIT02118.1| AMP-binding enzyme family protein [Yersinia pestis PY-89]
gi|391668514|gb|EIT03741.1| AMP-binding enzyme family protein [Yersinia pestis PY-90]
gi|391672685|gb|EIT07473.1| AMP-binding enzyme family protein [Yersinia pestis PY-91]
gi|391686125|gb|EIT19587.1| AMP-binding enzyme family protein [Yersinia pestis PY-93]
gi|391687645|gb|EIT20934.1| AMP-binding enzyme family protein [Yersinia pestis PY-92]
gi|391688868|gb|EIT22051.1| AMP-binding enzyme family protein [Yersinia pestis PY-94]
gi|391700243|gb|EIT32355.1| AMP-binding enzyme family protein [Yersinia pestis PY-95]
gi|391703587|gb|EIT35324.1| AMP-binding enzyme family protein [Yersinia pestis PY-96]
gi|391704373|gb|EIT36037.1| AMP-binding enzyme family protein [Yersinia pestis PY-98]
gi|391714573|gb|EIT45215.1| AMP-binding enzyme family protein [Yersinia pestis PY-99]
gi|391719942|gb|EIT50005.1| AMP-binding enzyme family protein [Yersinia pestis PY-100]
gi|391720466|gb|EIT50486.1| AMP-binding enzyme family protein [Yersinia pestis PY-101]
gi|391731130|gb|EIT59870.1| AMP-binding enzyme family protein [Yersinia pestis PY-102]
gi|391733565|gb|EIT61929.1| AMP-binding enzyme family protein [Yersinia pestis PY-103]
gi|391737148|gb|EIT65062.1| AMP-binding enzyme family protein [Yersinia pestis PY-113]
gi|411178288|gb|EKS48300.1| AMP-binding protein [Yersinia pestis INS]
Length = 601
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 121/424 (28%), Positives = 207/424 (48%), Gaps = 51/424 (12%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D LS LP H
Sbjct: 175 RIEGCDLDDLFTLIYTSGTTGEPKGVMLDYRNMAAQLYLHDQRLTLTPQDVSLSFLPLSH 234
Query: 78 VYERACGYFIFSRGIELMYTAVRN---LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 134
V+ERA +++ G + +Y +RN ++ +Q +P M +VP YE ++S I ++
Sbjct: 235 VFERAWSFYVMHTGAQNVY--IRNTDWVRSAMQAVKPTVMCAVPRFYEKVFSAINDKVAL 292
Query: 135 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 194
+ +RV+ + FKR+ +G +P + WL + +
Sbjct: 293 AKWHQRVLFHWAV--GCGERKFKRLQQG--------RP------LPWLSEQ--------M 328
Query: 195 HLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 253
+ LA++LV +K++ +G + + G L +I LF++AIGV ++ GYG+TE+ ++
Sbjct: 329 YTLADRLVLRKLRGVLGGRVRFLPAAGARLDDNIILFFQAIGVNIKYGYGMTETCATVSC 388
Query: 254 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 313
GS+G P+ ++++ G++ ++VRG VM+GYFK P T +A
Sbjct: 389 WEEQNFRFGSIGKPLPGIDVRL-----------GAENEIQVRGPIVMRGYFKKPQETLEA 437
Query: 314 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 373
EDGWL TGD G + G L + R KD + S G+ + P +E +
Sbjct: 438 FTEDGWLKTGDAGALDAQ----------GHLFITERLKDLMKTSGGKYIAPQMIEGTLGQ 487
Query: 374 SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRK 433
I Q+ +I ++ A+IVP E + A+ +++ + D EL + I ++ + K
Sbjct: 488 DRFIEQVAIIADTRKFVSALIVPSFESLEEYARSINLKYHDRLELLRHSHIVNMFEQRLK 547
Query: 434 WTSK 437
K
Sbjct: 548 EIQK 551
>gi|288941571|ref|YP_003443811.1| AMP-dependent synthetase and ligase [Allochromatium vinosum DSM
180]
gi|288896943|gb|ADC62779.1| AMP-dependent synthetase and ligase [Allochromatium vinosum DSM
180]
Length = 605
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 124/372 (33%), Positives = 185/372 (49%), Gaps = 48/372 (12%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+AT VYTSGTTG PKGVML+H N+L ++ +V D FLS LP H+ ER GY
Sbjct: 187 DLATIVYTSGTTGRPKGVMLSHHNILSNAHAVLTLVDVYGEDLFLSFLPLSHMLERTGGY 246
Query: 86 FI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
++ G + Y +V L +DL+ +P +I+VP V+E +Y I Q+ T A
Sbjct: 247 YLPMMAGSTVAYARSVAQLAEDLKAIRPTIIIAVPRVFERVYGRIADQLQTRPAP----V 302
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
R L ++ A ++E R+ + K+
Sbjct: 303 RWLFHLAVAVGWRDFLHEQGRAGRHPSLLLRPLL--------------------KRKVGD 342
Query: 204 KKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
+Q G + VSGG +LP + + +G+ + GYGLTE+SPV++ N+ S
Sbjct: 343 PVLQKLGGRLRVAVSGGAALPTDVARTFIGLGLPLIQGYGLTETSPVVSFNPLDDNIPES 402
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
VG PI +++I D +E+L ++G VMQGY+ N +AT L+ DGWL+TG
Sbjct: 403 VGVPIRGIQVRIGD--NDELL---------IKGENVMQGYWNNHAATAGVLNHDGWLHTG 451
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D ++R G + + GR KD +VLS GE V P +LE A L Q++V+
Sbjct: 452 D-----------QARIQGDHIFITGRIKDILVLSNGEKVPPADLEMAIGLDPLFDQVMVV 500
Query: 384 GQDQRRPGAIIV 395
G+ Q GA++V
Sbjct: 501 GEGQSYLGALLV 512
>gi|162421030|ref|YP_001607310.1| AMP binding protein [Yersinia pestis Angola]
gi|165928221|ref|ZP_02224053.1| AMP binding protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165937755|ref|ZP_02226316.1| AMP binding protein [Yersinia pestis biovar Orientalis str. IP275]
gi|166009084|ref|ZP_02229982.1| AMP binding protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166212014|ref|ZP_02238049.1| AMP binding protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|167422015|ref|ZP_02313768.1| AMP binding protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167426467|ref|ZP_02318220.1| AMP binding protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|270487868|ref|ZP_06204942.1| AMP-binding enzyme [Yersinia pestis KIM D27]
gi|294502628|ref|YP_003566690.1| AMP binding protein [Yersinia pestis Z176003]
gi|384121062|ref|YP_005503682.1| AMP binding protein [Yersinia pestis D106004]
gi|384124940|ref|YP_005507554.1| AMP binding protein [Yersinia pestis D182038]
gi|420577414|ref|ZP_15072171.1| AMP-binding enzyme family protein [Yersinia pestis PY-07]
gi|162353845|gb|ABX87793.1| AMP binding protein [Yersinia pestis Angola]
gi|165914167|gb|EDR32783.1| AMP binding protein [Yersinia pestis biovar Orientalis str. IP275]
gi|165919832|gb|EDR37133.1| AMP binding protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165992423|gb|EDR44724.1| AMP binding protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166206760|gb|EDR51240.1| AMP binding protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|166960152|gb|EDR56173.1| AMP binding protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167054565|gb|EDR64373.1| AMP binding protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|262360658|gb|ACY57379.1| AMP binding protein [Yersinia pestis D106004]
gi|262364604|gb|ACY61161.1| AMP binding protein [Yersinia pestis D182038]
gi|270336372|gb|EFA47149.1| AMP-binding enzyme [Yersinia pestis KIM D27]
gi|294353087|gb|ADE63428.1| AMP binding protein [Yersinia pestis Z176003]
gi|391464203|gb|EIR22517.1| AMP-binding enzyme family protein [Yersinia pestis PY-07]
Length = 588
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 205/417 (49%), Gaps = 51/417 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+ T +YTSGTTG PKGVML ++N+ Q+ + D LS LP HV+ERA
Sbjct: 169 DDLFTLIYTSGTTGEPKGVMLDYRNMAAQLYLHDQRLTLTPQDVSLSFLPLSHVFERAWS 228
Query: 85 YFIFSRGIELMYTAVRN---LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
+++ G + +Y +RN ++ +Q +P M +VP YE ++S I ++ + +RV
Sbjct: 229 FYVMHTGAQNVY--IRNTDWVRSAMQAVKPTVMCAVPRFYEKVFSAINDKVALAKWHQRV 286
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
+ + FKR+ +G +P + WL + ++ LA++L
Sbjct: 287 LFHWAV--GCGERKFKRLQQG--------RP------LPWLSEQ--------MYTLADRL 322
Query: 202 VYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
V +K++ +G + + G L +I LF++AIGV ++ GYG+TE+ ++
Sbjct: 323 VLRKLRGVLGGRVRFLPAAGARLDDNIILFFQAIGVNIKYGYGMTETCATVSCWEEQNFR 382
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
GS+G P+ ++++ G++ ++VRG VM+GYFK P T +A EDGWL
Sbjct: 383 FGSIGKPLPGIDVRL-----------GAENEIQVRGPIVMRGYFKKPQETLEAFTEDGWL 431
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
TGD G + G L + R KD + S G+ + P +E + I Q+
Sbjct: 432 KTGDAGALDAQ----------GHLFITERLKDLMKTSGGKYIAPQMIEGTLGQDRFIEQV 481
Query: 381 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 437
+I ++ A+IVP E + A+ +++ + D EL + I ++ + K K
Sbjct: 482 AIIADTRKFVSALIVPSFESLEEYARSINLKYHDRLELLRHSHIVNMFEQRLKEIQK 538
>gi|338533716|ref|YP_004667050.1| putative long-chain-fatty-acid--CoA ligase [Myxococcus fulvus HW-1]
gi|337259812|gb|AEI65972.1| putative long-chain-fatty-acid--CoA ligase [Myxococcus fulvus HW-1]
Length = 604
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 195/408 (47%), Gaps = 42/408 (10%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG- 84
D+A +YTSGTTG PKGVML+H N+ + +++++ P D+ L+ LP HV+ +
Sbjct: 170 DLAGLIYTSGTTGQPKGVMLSHANIARNVSAMHEVFPMGTDDRSLAFLPWAHVFGQTVEL 229
Query: 85 YFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
+ +FS G + + AV + D+L +P + SVP ++ +Y G+QK++ A + V
Sbjct: 230 HALFSMGASMAIAEAVEKIIDNLSEVKPTLLFSVPRIFNRIYDGLQKRM----AGEKPVT 285
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
R + R A A KR Q + S L+ L H +K+V+
Sbjct: 286 RFMFRRGLAVAAEKRALA------EQGKSSGLLDL---------------QHAFFDKVVF 324
Query: 204 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K+++ G K SGG ++ + F + +G+ V GYGLTE+SP+ A P +G
Sbjct: 325 SKVRARFGGRLKYAFSGGSAISKEVAEFIDNLGITVYEGYGLTETSPIATANFPENRKIG 384
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
SVG + I+I A T E +G + V G VM GY+ P ++ +G T
Sbjct: 385 SVGKALPGVRIEIDTAATGEA----KQGEIVVHGHNVMMGYYNKPEENEKVFTGNGGFRT 440
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD+G++ P G L + GR K+ L G+ V P +E++ S+ I +V
Sbjct: 441 GDMGYLDPD----------GYLYITGRIKEQYKLENGKYVVPSPIEQSLALSTYIANALV 490
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
G ++ AIIV D + + A + + EL K + LY E
Sbjct: 491 HGMNKPYNVAIIVVDVDALKKWATEKGLDTSSMPELLKRPEVLQLYRE 538
>gi|15642480|ref|NP_232113.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121590764|ref|ZP_01678094.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae
2740-80]
gi|121729013|ref|ZP_01682015.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae V52]
gi|147675212|ref|YP_001217984.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae O395]
gi|153819335|ref|ZP_01972002.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae NCTC
8457]
gi|153822876|ref|ZP_01975543.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae B33]
gi|227082604|ref|YP_002811155.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae M66-2]
gi|227118925|ref|YP_002820821.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae O395]
gi|229507458|ref|ZP_04396963.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae BX 330286]
gi|229512347|ref|ZP_04401826.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae B33]
gi|229519483|ref|ZP_04408926.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae RC9]
gi|229606963|ref|YP_002877611.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae MJ-1236]
gi|254849608|ref|ZP_05238958.1| long-chain-fatty-acid-CoA ligase [Vibrio cholerae MO10]
gi|255746847|ref|ZP_05420792.1| long-chain-fatty-acid--CoA ligase [Vibrio cholera CIRS 101]
gi|262162012|ref|ZP_06031028.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae INDRE 91/1]
gi|262167313|ref|ZP_06035023.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae RC27]
gi|298500161|ref|ZP_07009966.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|360036356|ref|YP_004938119.1| long-chain acyl-CoA synthetase [Vibrio cholerae O1 str.
2010EL-1786]
gi|379742270|ref|YP_005334239.1| long-chain acyl-CoA synthetase [Vibrio cholerae IEC224]
gi|417814498|ref|ZP_12461151.1| AMP-binding enzyme family protein [Vibrio cholerae HC-49A2]
gi|417818238|ref|ZP_12464866.1| AMP-binding enzyme family protein [Vibrio cholerae HCUF01]
gi|418335481|ref|ZP_12944390.1| AMP-binding enzyme family protein [Vibrio cholerae HC-06A1]
gi|418339446|ref|ZP_12948336.1| AMP-binding enzyme family protein [Vibrio cholerae HC-23A1]
gi|418347017|ref|ZP_12951770.1| AMP-binding enzyme family protein [Vibrio cholerae HC-28A1]
gi|418350773|ref|ZP_12955504.1| AMP-binding enzyme family protein [Vibrio cholerae HC-43A1]
gi|418356029|ref|ZP_12958748.1| AMP-binding enzyme family protein [Vibrio cholerae HC-61A1]
gi|419827426|ref|ZP_14350925.1| AMP-binding enzyme family protein [Vibrio cholerae CP1033(6)]
gi|421317974|ref|ZP_15768542.1| AMP-binding enzyme family protein [Vibrio cholerae CP1032(5)]
gi|421322231|ref|ZP_15772783.1| AMP-binding enzyme family protein [Vibrio cholerae CP1038(11)]
gi|421326029|ref|ZP_15776553.1| AMP-binding enzyme family protein [Vibrio cholerae CP1041(14)]
gi|421329687|ref|ZP_15780197.1| AMP-binding enzyme family protein [Vibrio cholerae CP1042(15)]
gi|421333643|ref|ZP_15784120.1| AMP-binding enzyme family protein [Vibrio cholerae CP1046(19)]
gi|421337185|ref|ZP_15787646.1| AMP-binding enzyme family protein [Vibrio cholerae CP1048(21)]
gi|421340612|ref|ZP_15791044.1| AMP-binding enzyme family protein [Vibrio cholerae HC-20A2]
gi|421348160|ref|ZP_15798537.1| AMP-binding enzyme family protein [Vibrio cholerae HC-46A1]
gi|422897573|ref|ZP_16935012.1| AMP-binding enzyme family protein [Vibrio cholerae HC-40A1]
gi|422903772|ref|ZP_16938736.1| AMP-binding enzyme family protein [Vibrio cholerae HC-48A1]
gi|422907656|ref|ZP_16942449.1| AMP-binding enzyme family protein [Vibrio cholerae HC-70A1]
gi|422914496|ref|ZP_16949000.1| AMP-binding enzyme family protein [Vibrio cholerae HFU-02]
gi|422926700|ref|ZP_16959712.1| AMP-binding enzyme family protein [Vibrio cholerae HC-38A1]
gi|423146023|ref|ZP_17133616.1| AMP-binding enzyme family protein [Vibrio cholerae HC-19A1]
gi|423150699|ref|ZP_17138012.1| AMP-binding enzyme family protein [Vibrio cholerae HC-21A1]
gi|423154533|ref|ZP_17141697.1| AMP-binding enzyme family protein [Vibrio cholerae HC-22A1]
gi|423157601|ref|ZP_17144693.1| AMP-binding enzyme family protein [Vibrio cholerae HC-32A1]
gi|423161173|ref|ZP_17148111.1| AMP-binding enzyme family protein [Vibrio cholerae HC-33A2]
gi|423166002|ref|ZP_17152721.1| AMP-binding enzyme family protein [Vibrio cholerae HC-48B2]
gi|423732032|ref|ZP_17705333.1| AMP-binding enzyme family protein [Vibrio cholerae HC-17A1]
gi|423771758|ref|ZP_17713598.1| AMP-binding enzyme family protein [Vibrio cholerae HC-50A2]
gi|423896810|ref|ZP_17727642.1| AMP-binding enzyme family protein [Vibrio cholerae HC-62A1]
gi|423932013|ref|ZP_17732035.1| AMP-binding enzyme family protein [Vibrio cholerae HC-77A1]
gi|424003448|ref|ZP_17746522.1| AMP-binding enzyme family protein [Vibrio cholerae HC-17A2]
gi|424007242|ref|ZP_17750211.1| AMP-binding enzyme family protein [Vibrio cholerae HC-37A1]
gi|424025222|ref|ZP_17764871.1| AMP-binding enzyme family protein [Vibrio cholerae HC-62B1]
gi|424028108|ref|ZP_17767709.1| AMP-binding enzyme family protein [Vibrio cholerae HC-69A1]
gi|424587389|ref|ZP_18026967.1| AMP-binding enzyme family protein [Vibrio cholerae CP1030(3)]
gi|424596043|ref|ZP_18035361.1| AMP-binding enzyme family protein [Vibrio cholerae CP1040(13)]
gi|424599952|ref|ZP_18039130.1| AMP-binding enzyme family protein [Vibrio Cholerae CP1044(17)]
gi|424602714|ref|ZP_18041853.1| AMP-binding enzyme family protein [Vibrio cholerae CP1047(20)]
gi|424607648|ref|ZP_18046588.1| AMP-binding enzyme family protein [Vibrio cholerae CP1050(23)]
gi|424611464|ref|ZP_18050302.1| AMP-binding enzyme family protein [Vibrio cholerae HC-39A1]
gi|424614292|ref|ZP_18053076.1| AMP-binding enzyme family protein [Vibrio cholerae HC-41A1]
gi|424618259|ref|ZP_18056929.1| AMP-binding enzyme family protein [Vibrio cholerae HC-42A1]
gi|424623045|ref|ZP_18061548.1| AMP-binding enzyme family protein [Vibrio cholerae HC-47A1]
gi|424646005|ref|ZP_18083739.1| AMP-binding enzyme family protein [Vibrio cholerae HC-56A2]
gi|424653772|ref|ZP_18091151.1| AMP-binding enzyme family protein [Vibrio cholerae HC-57A2]
gi|424657593|ref|ZP_18094877.1| AMP-binding enzyme family protein [Vibrio cholerae HC-81A2]
gi|440710708|ref|ZP_20891356.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae 4260B]
gi|443504822|ref|ZP_21071774.1| AMP-binding enzyme family protein [Vibrio cholerae HC-64A1]
gi|443508728|ref|ZP_21075483.1| AMP-binding enzyme family protein [Vibrio cholerae HC-65A1]
gi|443512566|ref|ZP_21079199.1| AMP-binding enzyme family protein [Vibrio cholerae HC-67A1]
gi|443516125|ref|ZP_21082630.1| AMP-binding enzyme family protein [Vibrio cholerae HC-68A1]
gi|443519918|ref|ZP_21086305.1| AMP-binding enzyme family protein [Vibrio cholerae HC-71A1]
gi|443524810|ref|ZP_21091013.1| AMP-binding enzyme family protein [Vibrio cholerae HC-72A2]
gi|443532394|ref|ZP_21098408.1| AMP-binding enzyme family protein [Vibrio cholerae HC-7A1]
gi|443536208|ref|ZP_21102075.1| AMP-binding enzyme family protein [Vibrio cholerae HC-80A1]
gi|443539737|ref|ZP_21105590.1| AMP-binding enzyme family protein [Vibrio cholerae HC-81A1]
gi|449055077|ref|ZP_21733745.1| Long-chain-fatty-acid--CoA ligase [Vibrio cholerae O1 str. Inaba
G4222]
gi|9657064|gb|AAF95626.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|121547405|gb|EAX57518.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae
2740-80]
gi|121628695|gb|EAX61165.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae V52]
gi|126510116|gb|EAZ72710.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae NCTC
8457]
gi|126519613|gb|EAZ76836.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae B33]
gi|146317095|gb|ABQ21634.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae O395]
gi|227010492|gb|ACP06704.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae M66-2]
gi|227014375|gb|ACP10585.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae O395]
gi|229344172|gb|EEO09147.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae RC9]
gi|229352312|gb|EEO17253.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae B33]
gi|229354963|gb|EEO19884.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae BX 330286]
gi|229369618|gb|ACQ60041.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae MJ-1236]
gi|254845313|gb|EET23727.1| long-chain-fatty-acid-CoA ligase [Vibrio cholerae MO10]
gi|255735249|gb|EET90649.1| long-chain-fatty-acid--CoA ligase [Vibrio cholera CIRS 101]
gi|262024288|gb|EEY42979.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae RC27]
gi|262028261|gb|EEY46918.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae INDRE 91/1]
gi|297540854|gb|EFH76908.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|340035834|gb|EGQ96812.1| AMP-binding enzyme family protein [Vibrio cholerae HCUF01]
gi|340036984|gb|EGQ97960.1| AMP-binding enzyme family protein [Vibrio cholerae HC-49A2]
gi|341619829|gb|EGS45631.1| AMP-binding enzyme family protein [Vibrio cholerae HC-48A1]
gi|341619946|gb|EGS45733.1| AMP-binding enzyme family protein [Vibrio cholerae HC-70A1]
gi|341620751|gb|EGS46517.1| AMP-binding enzyme family protein [Vibrio cholerae HC-40A1]
gi|341636308|gb|EGS61010.1| AMP-binding enzyme family protein [Vibrio cholerae HFU-02]
gi|341645701|gb|EGS69830.1| AMP-binding enzyme family protein [Vibrio cholerae HC-38A1]
gi|356416516|gb|EHH70147.1| AMP-binding enzyme family protein [Vibrio cholerae HC-06A1]
gi|356416913|gb|EHH70534.1| AMP-binding enzyme family protein [Vibrio cholerae HC-21A1]
gi|356422267|gb|EHH75750.1| AMP-binding enzyme family protein [Vibrio cholerae HC-19A1]
gi|356427738|gb|EHH80979.1| AMP-binding enzyme family protein [Vibrio cholerae HC-22A1]
gi|356428406|gb|EHH81633.1| AMP-binding enzyme family protein [Vibrio cholerae HC-23A1]
gi|356429545|gb|EHH82761.1| AMP-binding enzyme family protein [Vibrio cholerae HC-28A1]
gi|356439071|gb|EHH92071.1| AMP-binding enzyme family protein [Vibrio cholerae HC-32A1]
gi|356443666|gb|EHH96485.1| AMP-binding enzyme family protein [Vibrio cholerae HC-33A2]
gi|356445269|gb|EHH98078.1| AMP-binding enzyme family protein [Vibrio cholerae HC-43A1]
gi|356449593|gb|EHI02339.1| AMP-binding enzyme family protein [Vibrio cholerae HC-48B2]
gi|356452527|gb|EHI05206.1| AMP-binding enzyme family protein [Vibrio cholerae HC-61A1]
gi|356647510|gb|AET27565.1| long-chain acyl-CoA synthetase [Vibrio cholerae O1 str.
2010EL-1786]
gi|378795780|gb|AFC59251.1| long-chain acyl-CoA synthetase [Vibrio cholerae IEC224]
gi|395916232|gb|EJH27062.1| AMP-binding enzyme family protein [Vibrio cholerae CP1032(5)]
gi|395917867|gb|EJH28695.1| AMP-binding enzyme family protein [Vibrio cholerae CP1041(14)]
gi|395917971|gb|EJH28798.1| AMP-binding enzyme family protein [Vibrio cholerae CP1038(11)]
gi|395928221|gb|EJH38984.1| AMP-binding enzyme family protein [Vibrio cholerae CP1042(15)]
gi|395929045|gb|EJH39798.1| AMP-binding enzyme family protein [Vibrio cholerae CP1046(19)]
gi|395932284|gb|EJH43028.1| AMP-binding enzyme family protein [Vibrio cholerae CP1048(21)]
gi|395939895|gb|EJH50577.1| AMP-binding enzyme family protein [Vibrio cholerae HC-20A2]
gi|395942739|gb|EJH53415.1| AMP-binding enzyme family protein [Vibrio cholerae HC-46A1]
gi|395957678|gb|EJH68210.1| AMP-binding enzyme family protein [Vibrio cholerae HC-56A2]
gi|395958149|gb|EJH68652.1| AMP-binding enzyme family protein [Vibrio cholerae HC-57A2]
gi|395960785|gb|EJH71145.1| AMP-binding enzyme family protein [Vibrio cholerae HC-42A1]
gi|395970073|gb|EJH79884.1| AMP-binding enzyme family protein [Vibrio cholerae HC-47A1]
gi|395971996|gb|EJH81620.1| AMP-binding enzyme family protein [Vibrio cholerae CP1030(3)]
gi|395974400|gb|EJH83929.1| AMP-binding enzyme family protein [Vibrio cholerae CP1047(20)]
gi|408006131|gb|EKG44307.1| AMP-binding enzyme family protein [Vibrio cholerae HC-39A1]
gi|408010593|gb|EKG48446.1| AMP-binding enzyme family protein [Vibrio cholerae HC-41A1]
gi|408030465|gb|EKG67126.1| AMP-binding enzyme family protein [Vibrio cholerae CP1040(13)]
gi|408040591|gb|EKG76766.1| AMP-binding enzyme family protein [Vibrio Cholerae CP1044(17)]
gi|408041889|gb|EKG77976.1| AMP-binding enzyme family protein [Vibrio cholerae CP1050(23)]
gi|408051829|gb|EKG86905.1| AMP-binding enzyme family protein [Vibrio cholerae HC-81A2]
gi|408608216|gb|EKK81619.1| AMP-binding enzyme family protein [Vibrio cholerae CP1033(6)]
gi|408622477|gb|EKK95461.1| AMP-binding enzyme family protein [Vibrio cholerae HC-17A1]
gi|408632827|gb|EKL05258.1| AMP-binding enzyme family protein [Vibrio cholerae HC-50A2]
gi|408653605|gb|EKL24767.1| AMP-binding enzyme family protein [Vibrio cholerae HC-77A1]
gi|408654098|gb|EKL25241.1| AMP-binding enzyme family protein [Vibrio cholerae HC-62A1]
gi|408844341|gb|EKL84473.1| AMP-binding enzyme family protein [Vibrio cholerae HC-37A1]
gi|408845097|gb|EKL85218.1| AMP-binding enzyme family protein [Vibrio cholerae HC-17A2]
gi|408869573|gb|EKM08869.1| AMP-binding enzyme family protein [Vibrio cholerae HC-62B1]
gi|408878384|gb|EKM17394.1| AMP-binding enzyme family protein [Vibrio cholerae HC-69A1]
gi|439974037|gb|ELP50241.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae 4260B]
gi|443430901|gb|ELS73459.1| AMP-binding enzyme family protein [Vibrio cholerae HC-64A1]
gi|443434731|gb|ELS80883.1| AMP-binding enzyme family protein [Vibrio cholerae HC-65A1]
gi|443438624|gb|ELS88344.1| AMP-binding enzyme family protein [Vibrio cholerae HC-67A1]
gi|443442661|gb|ELS95969.1| AMP-binding enzyme family protein [Vibrio cholerae HC-68A1]
gi|443446442|gb|ELT03107.1| AMP-binding enzyme family protein [Vibrio cholerae HC-71A1]
gi|443449263|gb|ELT09564.1| AMP-binding enzyme family protein [Vibrio cholerae HC-72A2]
gi|443457784|gb|ELT25181.1| AMP-binding enzyme family protein [Vibrio cholerae HC-7A1]
gi|443460711|gb|ELT31795.1| AMP-binding enzyme family protein [Vibrio cholerae HC-80A1]
gi|443464867|gb|ELT39528.1| AMP-binding enzyme family protein [Vibrio cholerae HC-81A1]
gi|448265119|gb|EMB02354.1| Long-chain-fatty-acid--CoA ligase [Vibrio cholerae O1 str. Inaba
G4222]
Length = 601
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 131/435 (30%), Positives = 206/435 (47%), Gaps = 55/435 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+
Sbjct: 173 EQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVF 232
Query: 80 ERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ERA ++ +G Y V ++++ L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVVKAPLV 292
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
R+V+ F + C + Q+QPS++ L H A
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------------LKQSHQFA 328
Query: 199 EKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 329 DKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDH 388
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
C S+G + ++KI E NE+L VRG VM+GY+K T ++ DE
Sbjct: 389 CFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLDKETTESFDEQ 437
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
G+L TGD G I + G L + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 429
QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNELQK 547
Query: 430 ELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFRLLP 562
>gi|218261977|ref|ZP_03476629.1| hypothetical protein PRABACTJOHN_02300, partial [Parabacteroides
johnsonii DSM 18315]
gi|218223656|gb|EEC96306.1| hypothetical protein PRABACTJOHN_02300 [Parabacteroides johnsonii
DSM 18315]
Length = 483
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 217/427 (50%), Gaps = 49/427 (11%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
+++ + D AT YTSGTT +PKGV+LTH+N + V ++ + L +LP H +
Sbjct: 21 QSLQNGDYATITYTSGTTADPKGVILTHRNYTANVEQALSCVDIDDTWRTLVILPLDHCF 80
Query: 80 ERACGYFIF-SRG-----IELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQK 130
G++IF S+G +++ T + LK+ +++ ++P+ ++SVP + + I++
Sbjct: 81 AHVVGFYIFMSKGASVATVQVGRTGLETLKNIPVNIKEFKPYLILSVPALAKNFKKNIEQ 140
Query: 131 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 190
I R + + R+ IY G + +L
Sbjct: 141 GI-------RAQGKHVTRLFNFALKVAYIYNGDGGEDKGRGARFL--------------- 178
Query: 191 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
L PL L +++++ K++ G K + GG L + FY AIG+ + GYGL+E++P
Sbjct: 179 LKPLVSLFDRVLFTKVRENFGGQLKFFIGGGALLDKDLQKFYYAIGLPMYQGYGLSEATP 238
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
VI+ P + GS G + ++KI DAE E LP G KG + +RG VM GY+KNP +
Sbjct: 239 VISTNGPHRHTFGSSGVLVRPLDLKICDAEGKE-LPTGEKGEIVIRGENVMAGYWKNPVS 297
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T + + +GWL TGD+G++ H G+L + GR K ++ S GE P +EE
Sbjct: 298 TAETV-RNGWLYTGDMGYMG--HD--------GLLYVLGRFKSLLIGSDGEKYSPEGIEE 346
Query: 370 AALR-SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD-ASELSKEKTISLL 427
A + SS I Q+++ A++VP+K+ + K L+ H D +S+ +E+ I ++
Sbjct: 347 ALVEHSSCIDQLILYNNQSPYTVALVVPNKDRL---KKHLAHQHLDLSSDKGREEAIRII 403
Query: 428 YGELRKW 434
++ ++
Sbjct: 404 QSQIDRF 410
>gi|417840982|ref|ZP_12487090.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M19501]
gi|341950793|gb|EGT77380.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M19501]
Length = 602
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 126/407 (30%), Positives = 191/407 (46%), Gaps = 47/407 (11%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 178 DLFTIIYTSGTTGEPKGVMLDYANLAHQLEAHDLSLNVTDQDVSLSFLPFSHIFERAWAA 237
Query: 86 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 238 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 297
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
I + + F L N K +L L LA+KLV
Sbjct: 298 WAISVGQKH---------FDLRANNKAIPFL---------------LKKQFALADKLVLS 333
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ +G K GG L I LF+ IG+ +++GYG+TE++ ++ S
Sbjct: 334 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHVIGINIKLGYGMTETTATVSCWHDFQFNPNS 393
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
+G I E+KI E NE+L VRG VM+GY+K P T QA EDG+L TG
Sbjct: 394 IGTLIPKAEVKI--GENNEIL---------VRGGMVMKGYYKKPEETAQAFTEDGFLKTG 442
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 443 DAGEFDKQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 492
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
++ A+IVP + + AK+L+I + D EL K I ++ +
Sbjct: 493 ADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSDILKMFEQ 539
>gi|74318615|ref|YP_316355.1| long-chain fatty-acid-CoA ligase [Thiobacillus denitrificans ATCC
25259]
gi|74058110|gb|AAZ98550.1| long-chain fatty-acid-CoA ligase [Thiobacillus denitrificans ATCC
25259]
Length = 602
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 133/412 (32%), Positives = 196/412 (47%), Gaps = 53/412 (12%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLL---HQIRSLYDIVPAENGDKFLSMLPPWH 77
++ D +A+ VYTSGTTG PKGVMLTH NLL + D P E FLS LP H
Sbjct: 177 SLAPDLLASIVYTSGTTGRPKGVMLTHDNLLWNAYYASHCADFGPHE---VFLSFLPLSH 233
Query: 78 VYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 135
ER GY++ G E+ Y ++ L DLQ +P +ISVP +YE +Y IQ +
Sbjct: 234 TLERTGGYYLAMLLGAEVAYARSIAQLAQDLQAIRPTVLISVPRIYERVYGRIQDGLEKK 293
Query: 136 SAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLH 195
A ARAL R++ + ++R R+Q + W +
Sbjct: 294 GAP----ARALFRLAV-HVGWRR------FERSQGRA---------YWHPELLLWPLLER 333
Query: 196 LLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
L+A + Q G + +SGG +L + + +GV V GYGLTE+SPV+ R
Sbjct: 334 LVARNVT----QKLGGRLRLAISGGAALSPEVARVFIGLGVPVYQGYGLTETSPVVCVNR 389
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
P N ++G P+ E++I D +E+L R VM+GY+K+ +AT+ +D
Sbjct: 390 PDSNSPATIGQPLPGVEVRIGD--NDELL---------TRSRCVMRGYWKDEAATRAMID 438
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
DGWL++GD + G + GR KD IVL+ GE V P ++E A L
Sbjct: 439 ADGWLHSGDQARV----------DADGHYTIIGRIKDIIVLNNGEKVPPTDMESAILLDP 488
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLL 427
L Q++V+G+ + A+ V ++ A L + A + L K L
Sbjct: 489 LFEQVMVVGEGRPYLAALTVLNEAHWEAFAASLHLDPAQPATLRDPKVTRAL 540
>gi|319941889|ref|ZP_08016210.1| AMP-dependent synthetase and ligase [Sutterella wadsworthensis
3_1_45B]
gi|319804542|gb|EFW01412.1| AMP-dependent synthetase and ligase [Sutterella wadsworthensis
3_1_45B]
Length = 619
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 124/391 (31%), Positives = 192/391 (49%), Gaps = 46/391 (11%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 83
S D+A VYTSGTTGNPKGVMLTH+N+L +R + + + LS LP H +ER
Sbjct: 189 STDLAALVYTSGTTGNPKGVMLTHRNVLSNLRGVLQSLQPYADETLLSFLPLSHTFERTA 248
Query: 84 GYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y++ G+ L + ++ L DDL+ +P ++SVP VY+ +Y ++ +
Sbjct: 249 SYYLAVGTGLTLAFNRSIATLADDLKSIRPTILMSVPRVYDMIYGKLRDGLAKKP----- 303
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
A +R F + A + + FC A +D L A + +K
Sbjct: 304 ---AYVRYLFNW-AVEVGWRRFCRENGLPIEPSGRAWLDPLVAGFL-----------DKK 348
Query: 202 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
+ K+++S G +SGG +L + + +GV + GYG+TE+SP+IA + N
Sbjct: 349 IGKQLRSVFGDRIHLYISGGAALNPAVAKVFLGLGVPIFQGYGMTETSPIIAVNKVGQNH 408
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
+VG +++ E+K+ G G + VRG VMQGY+ AT+ L +DGWL
Sbjct: 409 PSTVGPKLDNIEVKL-----------GDGGELLVRGPSVMQGYWHREEATRAILSDDGWL 457
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
+TGD+ I G + + GR K+ IV STGE V P +LE A L Q
Sbjct: 458 STGDVAEIYQD----------GCIRITGRIKEIIVTSTGEKVPPADLEAAVETDPLFAQT 507
Query: 381 VVIGQDQRRPG--AIIVPDKEEVLMAAKRLS 409
+ +G D+ A++ PD+ + L A +L
Sbjct: 508 LAVGDDRICIALVAVVNPDEWQRLCAELKLD 538
>gi|417843442|ref|ZP_12489516.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M21127]
gi|341949585|gb|EGT76188.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M21127]
Length = 602
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 192/407 (47%), Gaps = 47/407 (11%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 178 DLFTIIYTSGTTGEPKGVMLDYANLAHQLEAHDLSLNVTDRDISLSFLPFSHIFERAWAA 237
Query: 86 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 238 YILHRGAILCYLEDTNQVRSTLTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 297
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
I + + F L N K +L L LA+KLV
Sbjct: 298 WAISVGQKH---------FDLRANNKAIPFL---------------LKKQFALADKLVLS 333
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 334 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 393
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
+G + E+KI E NE+L VRG VM+GY+K P T QA EDG+L TG
Sbjct: 394 IGTLMPKAEVKI--GENNEIL---------VRGGMVMKGYYKKPEETAQAFTEDGFLKTG 442
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D G G L + R K+ + S G+ + P +E + + QI +I
Sbjct: 443 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFVEQIAII 492
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
++ A+IVP + + AK+L+I + D EL K I ++ +
Sbjct: 493 ADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSDILKMFEQ 539
>gi|160885360|ref|ZP_02066363.1| hypothetical protein BACOVA_03359 [Bacteroides ovatus ATCC 8483]
gi|156108982|gb|EDO10727.1| AMP-binding enzyme [Bacteroides ovatus ATCC 8483]
Length = 604
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 131/443 (29%), Positives = 207/443 (46%), Gaps = 54/443 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHV 78
E DD+A +YTSGTTG PKGVML H L Q + D + + D ++ LP HV
Sbjct: 175 ERASYDDLANILYTSGTTGEPKGVMLHHSCYLEQFHTHDDRLTTMSDKDVSMNFLPLTHV 234
Query: 79 YERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
+E+A Y +G+++ + +++ ++ +P M SVP +E +Y+G+Q++I ++
Sbjct: 235 FEKAWCYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKINETTG 294
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
++ + IR+ RI+ R K P + L +
Sbjct: 295 LKKALMLDAIRVG-------RIH-NLDYLRQGKTPPVMNQL---------------KYKF 331
Query: 198 AEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
EK +Y ++ IGI + G ++P I+ F ++G+ + VGYGLTES+ ++
Sbjct: 332 YEKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVGYGLTESTATVSCTL 391
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
P +GSVG + E+KI E NE+L +RG + +GY+K AT A++
Sbjct: 392 PVGYDIGSVGVVLPGIEVKI--GEGNEIL---------LRGKTITKGYYKKAEATAAAIE 440
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
DGW +TGD G+ G L L R KD S G+ V P LE +
Sbjct: 441 PDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNGKYVAPQALETKLVIDR 489
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT 435
I QI +I ++ A+IVP V AK I + D +EL + I L+ R T
Sbjct: 490 YIDQIAIIADQRKFVSALIVPVYGFVKEYAKEKGIEYKDMTELLQHPKIVGLF-RARIDT 548
Query: 436 SKCSF----QIGPIHVVDEPFTV 454
+ F QI ++ EPF++
Sbjct: 549 LQQQFAHYEQIKRFTLLPEPFSM 571
>gi|291513979|emb|CBK63189.1| Long-chain acyl-CoA synthetases (AMP-forming) [Alistipes shahii WAL
8301]
Length = 635
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 136/459 (29%), Positives = 223/459 (48%), Gaps = 68/459 (14%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNL---LHQIRSLYDIVPAENGDKFLSMLPPW 76
+ I +DD AT YTSGTT +PKGV+LTH+N + Q S DI P + L +LP
Sbjct: 170 QAIRNDDYATITYTSGTTSDPKGVILTHRNYTANVEQALSRVDIPPH---FRTLIILPLD 226
Query: 77 HVYERACGYFIF----------SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 126
H + G++I G M T ++N+ +++ QPH+++SVP + +
Sbjct: 227 HCFAHVVGFYIMIACGASVATVQIGATPMET-LKNIPQNIREVQPHFLLSVPALAKNFRK 285
Query: 127 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 186
I+ I + +R ++AY + +G+ W RI
Sbjct: 286 NIESSIRAKGRFTEALFNLALRTAYAYNS-----DGYGRGSG--------------W-RI 325
Query: 187 ICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSL-PMHIDLFYEAIGVKVQVGYGLT 245
+ A P+ + + L+++K++ A G GGG+L + F+ AIG+ + GYGL+
Sbjct: 326 VLA---PVVGIFDALLFRKVRQAFGGHLEFFVGGGALLDAELQRFFYAIGIPMFQGYGLS 382
Query: 246 ESSPVIAARRPT--CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 303
E++PVI+ P + GS G + ++KI+D E EV P G KG + VRG VM GY
Sbjct: 383 EATPVISTNSPKHHWHRFGSSGKILIPLDLKILDEEGREV-PRGQKGEIVVRGENVMAGY 441
Query: 304 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 363
+KNP AT + + DGWL+TGD+G+++ L + GR K ++ S GE
Sbjct: 442 WKNPGATAETV-RDGWLHTGDMGYVSEDD----------FLYVLGRFKSLLIASDGEKYS 490
Query: 364 PLELEEAAL-RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 422
P +EEA + +S I QI+V GAI+VP++E + + A+ + ++ E
Sbjct: 491 PEGMEEAIVDKSPYIDQIIVHNNQSPFTGAIVVPNREALRRELEARRTPEAERANVAAE- 549
Query: 423 TISLLYGELRKWTSKCSFQ--------IGPIHVVDEPFT 453
+L E+ ++ + ++ + +VDE FT
Sbjct: 550 ---ILGAEIDRYRAGGTYAGEFPERWLPAGLAIVDEAFT 585
>gi|254292111|ref|ZP_04962885.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae
AM-19226]
gi|150421979|gb|EDN13952.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae
AM-19226]
Length = 601
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 131/435 (30%), Positives = 206/435 (47%), Gaps = 55/435 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+
Sbjct: 173 EQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVF 232
Query: 80 ERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ERA ++ +G Y V ++++ L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLV 292
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
R+V+ F + C + Q+QPS++ L H A
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------------LQQSHQFA 328
Query: 199 EKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 329 DKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDH 388
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
C S+G + ++KI E NE+L VRG VM+GY+K T ++ DE
Sbjct: 389 CFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLDKETAESFDEH 437
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
G+L TGD G I + G L + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLRTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 429
QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNDLQK 547
Query: 430 ELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFRLLP 562
>gi|227327104|ref|ZP_03831128.1| putative AMP-binding protein [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 601
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 208/437 (47%), Gaps = 54/437 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+D+ T +YTSGTTG PKGVML + N+ Q++ D + D L LP HV+ERA
Sbjct: 181 NDLFTLIYTSGTTGEPKGVMLDYTNMAVQLKLHDDRLDMSENDVSLCFLPLSHVFERAWS 240
Query: 85 YFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR-RVV 142
+ I RG + +Y + NL + +Q +P M +VP YE +YS I +++ + R R+
Sbjct: 241 FVIMHRGAQNVYLSDTNLVRAAMQAVKPTVMCAVPRFYEKVYSAIHEKVAQAPWYRQRLF 300
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
AL + A+ A + +G R +H A++LV
Sbjct: 301 NWALAQGQHAFLASQAAKKGGLFRR-------------------------VMHRYADRLV 335
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
K++ +G + + G L +I LF+ +IG+++ GYG+TE+ ++ L
Sbjct: 336 LGKLRQLLGGEIRFMPAAGARLDDNIILFFRSIGIRIIYGYGMTETCATVSCWEEGRFRL 395
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
GS+G P+ E++I G + ++VRG+ +M+GYF P T + EDGWL
Sbjct: 396 GSIGTPLPGIEVRI-----------GEEKEIQVRGATIMRGYFHRPQETAETFTEDGWLK 444
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD G + + G L + R KD + S G+ + P LE + I Q+
Sbjct: 445 TGDAGELDAN----------GNLFITERLKDLMKTSGGKYIAPQHLEGTLGQDRFIEQVA 494
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYG----ELRKWTSK 437
+I ++ A+IVP E + A +++ + D EL + I L+ E++K S+
Sbjct: 495 IIADTRKYVSALIVPCFEALEEYAHSINLKYHDRLELLRHSHIIELFEQRLREMQKELSR 554
Query: 438 CSFQIGPIHVVDEPFTV 454
Q+ ++ PF++
Sbjct: 555 VE-QVKKFTLLPVPFSM 570
>gi|448391685|ref|ZP_21566780.1| AMP-dependent synthetase and ligase [Haloterrigena salina JCM
13891]
gi|445665097|gb|ELZ17775.1| AMP-dependent synthetase and ligase [Haloterrigena salina JCM
13891]
Length = 660
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 129/394 (32%), Positives = 195/394 (49%), Gaps = 57/394 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV-PAENGD----------KFLSML 73
DD+A+ +YTSGTTG PKGV LTH+NL + LY P ++ D + LS+L
Sbjct: 212 DDLASLIYTSGTTGKPKGVKLTHRNLRSNVNQLYRRYGPRDDKDEDDPSITPESRALSVL 271
Query: 74 PPWHVYERACGYF-IFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P HV+ER G+F +F+ G + Y + +DL +VP VYE LY GI++
Sbjct: 272 PLAHVFERTAGHFMLFAAGACIAYGESPETFAEDLGAVGATSTTAVPRVYEKLYDGIRES 331
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
+ + AL ++ Y A ++ S L
Sbjct: 332 AAADEDTKEALEWAL-DVARRYNA--------ADDPGEELESELAD-------------- 368
Query: 192 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
A++LV+ I+ +G + + VSGGGSL + + +G+ + GYG+TE+SPV
Sbjct: 369 ------ADELVFATIREKLGGNIEFLVSGGGSLSPDLCQLFHTMGLSIVEGYGMTETSPV 422
Query: 251 IAARRPTCNVLGSVGHPINHTEIKIVDAET--NEVL-PAGSKGIVKVRGSQVMQGYFKNP 307
IA +P+ +G+VG + E K+ DA +E G+ G + VRG V +GY++ P
Sbjct: 423 IATNQPSDPRVGTVGPALAGVETKL-DASVVRDEAFDDEGTVGELLVRGPNVTEGYWEKP 481
Query: 308 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 367
AT +A E GWL TGDI R G L R K +VLSTG+NV P L
Sbjct: 482 GATDRAFTEAGWLRTGDI----------VHERPDGYLEFRERTKQLLVLSTGKNVAPGPL 531
Query: 368 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 401
E+A ++ Q +V+G ++ GA++VP+ +E+
Sbjct: 532 EDAFASVDVVEQAMVVGDGEKFVGALLVPNVDEL 565
>gi|365091990|ref|ZP_09329241.1| AMP-dependent synthetase and ligase [Acidovorax sp. NO-1]
gi|363415727|gb|EHL22853.1| AMP-dependent synthetase and ligase [Acidovorax sp. NO-1]
Length = 619
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 125/438 (28%), Positives = 210/438 (47%), Gaps = 43/438 (9%)
Query: 23 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERA 82
G DD+A VYTSGTTG PKGVMLTH+N++ ++++ + + D FLS LP H +ER
Sbjct: 188 GEDDLAAIVYTSGTTGKPKGVMLTHRNVVSDVKAVLERIAPTVDDVFLSFLPLSHTFERT 247
Query: 83 CGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
GY++ + G + Y +V L +DL+ +P ++SVP +YE +++ + +++ +
Sbjct: 248 GGYYLPIAAGSCVAYARSVAQLAEDLKTIRPTVLVSVPRIYERIHAKLLEKLSPTP---- 303
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
++ A + + FC + P+ + W + A+ WP + +
Sbjct: 304 ------WKVQLYEAAQNKGWARFCAAQGLAAPTPDASSQAAGW---MAALPWP---VLQA 351
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LV K + + G + VSGG L I + +G+ + GYG+TE++PV++ N
Sbjct: 352 LVAKPLLAQFGGRVRVAVSGGAPLSPTIAKCFLGLGLPLIQGYGMTETAPVVSVNALDDN 411
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
VG + E++I G ++VRG VM+GY+K T + L DGW
Sbjct: 412 DPACVGKALPGVEVRI-----------GDNHELQVRGPIVMKGYWKRLEDTARILSTDGW 460
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
L TGD ++ G + ++GR K+ IV STGE + P +LE A L L+ Q
Sbjct: 461 LGTGD-----------QADIVNGRIYIKGRIKEIIVTSTGEKIPPGDLELALLADPLLEQ 509
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCS 439
V+G+++ + V + E A L + A LS + + K T+ +
Sbjct: 510 AFVVGENRPFIACVAVLNPSEWQRLAADLGLNPQAADSLSHPSVHRAVLARIEKNTASFA 569
Query: 440 FQIGP--IHVVDEPFTVN 455
P +H+ P+T+
Sbjct: 570 RYAVPRTVHLTLTPWTIE 587
>gi|153802845|ref|ZP_01957431.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae MZO-3]
gi|424592182|ref|ZP_18031606.1| AMP-binding enzyme family protein [Vibrio cholerae CP1037(10)]
gi|124121634|gb|EAY40377.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae MZO-3]
gi|408029778|gb|EKG66480.1| AMP-binding enzyme family protein [Vibrio cholerae CP1037(10)]
Length = 601
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 131/435 (30%), Positives = 206/435 (47%), Gaps = 55/435 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+
Sbjct: 173 EQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVF 232
Query: 80 ERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ERA ++ +G Y V ++++ L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLV 292
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
R+V+ F + C + Q+QPS++ L H A
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------------LKQSHQFA 328
Query: 199 EKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 329 DKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDH 388
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
C S+G + ++KI E NE+L VRG VM+GY+K T ++ DE
Sbjct: 389 CFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLDKETTESFDEQ 437
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
G+L TGD G I + G L + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 429
QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNELQK 547
Query: 430 ELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFRLLP 562
>gi|419838174|ref|ZP_14361612.1| AMP-binding enzyme family protein [Vibrio cholerae HC-46B1]
gi|421344598|ref|ZP_15795001.1| AMP-binding enzyme family protein [Vibrio cholerae HC-43B1]
gi|422308417|ref|ZP_16395567.1| AMP-binding enzyme family protein [Vibrio cholerae CP1035(8)]
gi|423736135|ref|ZP_17709325.1| AMP-binding enzyme family protein [Vibrio cholerae HC-41B1]
gi|424010468|ref|ZP_17753401.1| AMP-binding enzyme family protein [Vibrio cholerae HC-44C1]
gi|424660979|ref|ZP_18098226.1| AMP-binding enzyme family protein [Vibrio cholerae HE-16]
gi|395940678|gb|EJH51359.1| AMP-binding enzyme family protein [Vibrio cholerae HC-43B1]
gi|408049851|gb|EKG85040.1| AMP-binding enzyme family protein [Vibrio cholerae HE-16]
gi|408617687|gb|EKK90800.1| AMP-binding enzyme family protein [Vibrio cholerae CP1035(8)]
gi|408629107|gb|EKL01820.1| AMP-binding enzyme family protein [Vibrio cholerae HC-41B1]
gi|408856722|gb|EKL96417.1| AMP-binding enzyme family protein [Vibrio cholerae HC-46B1]
gi|408863097|gb|EKM02593.1| AMP-binding enzyme family protein [Vibrio cholerae HC-44C1]
Length = 601
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 131/435 (30%), Positives = 206/435 (47%), Gaps = 55/435 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+
Sbjct: 173 EQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVF 232
Query: 80 ERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ERA ++ +G Y V ++++ L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLV 292
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
R+V+ F + C + Q+QPS++ L H A
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------------LKQSHQFA 328
Query: 199 EKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 329 DKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDH 388
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
C S+G + ++KI E NE+L VRG VM+GY+K T ++ DE
Sbjct: 389 CFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLDKETAESFDEH 437
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
G+L TGD G I + G L + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 429
QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNELQK 547
Query: 430 ELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFRLLP 562
>gi|270295471|ref|ZP_06201672.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270274718|gb|EFA20579.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 601
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 130/441 (29%), Positives = 205/441 (46%), Gaps = 56/441 (12%)
Query: 23 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM--LPPWHVYE 80
DD+A +YTSGTTG PKGVML H N R ++DI D+ +SM LP HV+E
Sbjct: 178 SDDDLANILYTSGTTGEPKGVMLHHFNYREAFR-IHDIRLPFMTDRDVSMNFLPLTHVFE 236
Query: 81 RACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
+A Y RG+++ + ++++ ++ +P M SVP +E +Y+G+Q++I + R
Sbjct: 237 KAWTYLCIHRGVQVCINLRPQDIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKISQETGLR 296
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + I++ + R K P ++ L + E
Sbjct: 297 KAMMLDAIKVGRTH--------NIDYLRQGKTPPMMLHL---------------KYKFYE 333
Query: 200 KLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
K +Y ++ IGI + G ++P I F ++G+ + VGYGLTES+ ++
Sbjct: 334 KTIYALLKKTIGIENGNFFPTAGAAVPDEICEFVHSVGINMVVGYGLTESTATVSCFLNE 393
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
+GSVG + E+KI E NE+L +RG + GY+K P AT A+D +
Sbjct: 394 GYEIGSVGTVMPDVEVKI--GENNEIL---------LRGKTITTGYYKKPEATAAAIDRN 442
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GW +TGD G++ H L L R KD S G+ + P LE I
Sbjct: 443 GWFHTGDAGYLKDSH-----------LYLTERIKDLFKTSNGKYISPQALETKLAIDRYI 491
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 437
QI VI +++ A+IVP V AK I + + EL + I L+ R T +
Sbjct: 492 DQIAVIADERKFVSALIVPVYGFVKDYAKEKGIAYNNMDELLQHSKIQALF-RARIDTLQ 550
Query: 438 CSF----QIGPIHVVDEPFTV 454
F Q+ ++ EPF++
Sbjct: 551 QQFAHYEQVKRFTLLTEPFSM 571
>gi|339501423|ref|YP_004699458.1| Long-chain-fatty-acid--CoA ligase [Spirochaeta caldaria DSM 7334]
gi|338835772|gb|AEJ20950.1| Long-chain-fatty-acid--CoA ligase [Spirochaeta caldaria DSM 7334]
Length = 641
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 124/390 (31%), Positives = 198/390 (50%), Gaps = 47/390 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNL-LHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 83
D + T YTSGTTGNPKG+MLTHKN ++ + S+ E G + +LP H + +
Sbjct: 185 DRVVTISYTSGTTGNPKGIMLTHKNYYINSLDSVNIFKVPETGYRNFVILPVDHSFAQTV 244
Query: 84 G-YFIFSRGIELMYTA--------VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 134
G + RGIEL + +RN+ +++ +P ++++VP + +Q +I
Sbjct: 245 GIHASIQRGIELWFVDSRGGGMAILRNIPINMKEAEPVFLMTVPALSGNFMKKMQAEIDK 304
Query: 135 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 194
+ + I+ +Y +G RN K ++L AL+ +PL
Sbjct: 305 RGGIIKFLFDTGIKAGISYWG-----DGSFPERNLK--TFLNALV-----------YFPL 346
Query: 195 HLLAEKLVYKKIQSAIGISKAG--VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
+KLV K+++ + +A GG S + FY A+G+ + GYG+TE+SPVI+
Sbjct: 347 ----KKLVLDKVKTEVFGKRAQFFTGGGASFDIGQQRFYRALGMPLYQGYGMTEASPVIS 402
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
LG+ G ++H EI+I+ + P G KG + VRG VM+GYFKNP AT++
Sbjct: 403 TNIEGHTKLGTSGIALDHVEIRIIRDDGTFAEP-GEKGEICVRGPNVMKGYFKNPEATRE 461
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
L DGWL+TGD+GW+ G L + GRAK ++ + GE P +EEA
Sbjct: 462 TL-VDGWLHTGDLGWLDKD----------GYLTVAGRAKALLISADGEKYSPEGIEEAIA 510
Query: 373 RSS-LIRQIVVIGQDQRRPGAIIVPDKEEV 401
S+ ++ Q++V +R A+I + E+V
Sbjct: 511 NSAKVVNQVMVWNDHKRFTCALITLEDEQV 540
>gi|422348277|ref|ZP_16429170.1| hypothetical protein HMPREF9465_00060 [Sutterella wadsworthensis
2_1_59BFAA]
gi|404659530|gb|EKB32377.1| hypothetical protein HMPREF9465_00060 [Sutterella wadsworthensis
2_1_59BFAA]
Length = 621
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 121/387 (31%), Positives = 188/387 (48%), Gaps = 50/387 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E + D+A VYTSGTTGNPKGVMLTH+N++ I+ + + + FLS LP H +
Sbjct: 189 EAPKATDLAALVYTSGTTGNPKGVMLTHRNVISNIQGVLKNLQPSGHETFLSFLPLSHTF 248
Query: 80 ERACGYFIFSRGIELMYT-----AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 134
ER Y++ + L YT ++ NL+ D + +P ++SVP VYE +Y+ +Q +
Sbjct: 249 ERTTSYYL---ALGLGYTTAFNRSIANLQADFREIRPTVLMSVPRVYEMIYAKLQDGLAK 305
Query: 135 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 194
S +R F + A + + FC S A +D A +
Sbjct: 306 KS--------KFVRYLFDW-AVEVGWRRFCRENGLPVESSSRAWLDPFVAGFL------- 349
Query: 195 HLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 253
+K V ++++ G +SGG +L + + A+GV + GYG+TE+SP+I+
Sbjct: 350 ----DKKVGSQLRAVFGDRIHLYISGGAALSPAVARTFFALGVPIYQGYGMTETSPIISV 405
Query: 254 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 313
+ N +VG + + E+++ G ++VRG VM+GY+ ATK
Sbjct: 406 NKVGHNHPNTVGPALPNIEVRL-----------GEGDELQVRGPTVMKGYWNREEATKAI 454
Query: 314 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 373
EDGWL TGD+ I P G + + GR K+ IV ST E V P +LE A
Sbjct: 455 FTEDGWLRTGDVCTIYPD----------GNIRITGRIKEIIVTSTSEKVPPADLESAITS 504
Query: 374 SSLIRQIVVIGQDQRRPGAIIVPDKEE 400
L Q +V+G D+ A+ V + +E
Sbjct: 505 DRLFSQCMVVGDDRPFIAAVAVVNPDE 531
>gi|153830473|ref|ZP_01983140.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae 623-39]
gi|148874039|gb|EDL72174.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae 623-39]
Length = 601
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 131/435 (30%), Positives = 206/435 (47%), Gaps = 55/435 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+
Sbjct: 173 EQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVF 232
Query: 80 ERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ERA ++ +G Y V ++++ L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLV 292
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
R+V+ F + C + Q+QPS++ L H A
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------------LKQSHQFA 328
Query: 199 EKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 329 DKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDH 388
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
C S+G + ++KI E NE+L VRG VM+GY+K T ++ DE
Sbjct: 389 CFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLDKETTESFDEH 437
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
G+L TGD G I + G L + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 429
QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNELQK 547
Query: 430 ELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFRLLP 562
>gi|313204863|ref|YP_004043520.1| amp-dependent synthetase and ligase [Paludibacter propionicigenes
WB4]
gi|312444179|gb|ADQ80535.1| AMP-dependent synthetase and ligase [Paludibacter propionicigenes
WB4]
Length = 634
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/456 (28%), Positives = 222/456 (48%), Gaps = 56/456 (12%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ E I DD+A YTSGTT +PKG+MLTH+N + ++ + L +LP H
Sbjct: 169 RVEAIKPDDLANITYTSGTTADPKGIMLTHRNYTANVEQALTLMDISTSTRTLLILPLDH 228
Query: 78 VYERACGYFIF-----SRG-IELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGI 128
+ G++ F S G ++ T + LK+ +++ +P+ ++SVP + ++ I
Sbjct: 229 CFAHVAGFYSFMALGASVGTVQSGKTGMETLKNIPINIKELKPNILLSVPALAKSFKKNI 288
Query: 129 QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 188
+ I + + +S++Y EG+ + +
Sbjct: 289 EANIRAQGDMVNRLFNFALNLSYSYNK-----EGYNKGKG------------------LQ 325
Query: 189 AILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGYGLTE 246
+ PL +L +++++KK++ A G + GGG+L + IDL FY AIG+ + GYGL+E
Sbjct: 326 ILKKPLIVLFDRILFKKVREAFGGNLDFFIGGGAL-LDIDLQRFYYAIGIPMFQGYGLSE 384
Query: 247 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKN 306
++P+I++ + LGS G+ + E+KI D+E + LP KG + ++G VM GYFKN
Sbjct: 385 ATPIISSNGLKHHKLGSSGYLVKPLELKIYDSEGKQ-LPNYEKGEIVIKGENVMAGYFKN 443
Query: 307 PSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLE 366
AT + + +DGWL+TGD+G++ G L + GR K ++ S GE P
Sbjct: 444 EKATAETI-KDGWLHTGDMGYM----------DNDGFLYVVGRFKSLLISSDGEKYSPEG 492
Query: 367 LEEA-ALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS 425
+EE+ A S I Q+V+ A+IVP+KE + K + S +KE ++
Sbjct: 493 IEESIADNSRYIDQVVLYNNQNPYTTALIVPNKEALKRYVKEKKPQLSWDSNEAKELALN 552
Query: 426 LLYGELRKWTSKCSFQ--------IGPIHVVDEPFT 453
L E+ ++ + + V+ EPF+
Sbjct: 553 KLQKEINEYKKGGRLEGLFPERWLPSAVAVIGEPFS 588
>gi|153216942|ref|ZP_01950706.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae 1587]
gi|419830916|ref|ZP_14354401.1| AMP-binding enzyme family protein [Vibrio cholerae HC-1A2]
gi|419834601|ref|ZP_14358055.1| AMP-binding enzyme family protein [Vibrio cholerae HC-61A2]
gi|422918315|ref|ZP_16952629.1| AMP-binding enzyme family protein [Vibrio cholerae HC-02A1]
gi|423823214|ref|ZP_17717222.1| AMP-binding enzyme family protein [Vibrio cholerae HC-55C2]
gi|423857175|ref|ZP_17721024.1| AMP-binding enzyme family protein [Vibrio cholerae HC-59A1]
gi|423884451|ref|ZP_17724618.1| AMP-binding enzyme family protein [Vibrio cholerae HC-60A1]
gi|423998737|ref|ZP_17741987.1| AMP-binding enzyme family protein [Vibrio cholerae HC-02C1]
gi|424017639|ref|ZP_17757465.1| AMP-binding enzyme family protein [Vibrio cholerae HC-55B2]
gi|424020556|ref|ZP_17760337.1| AMP-binding enzyme family protein [Vibrio cholerae HC-59B1]
gi|424625937|ref|ZP_18064396.1| AMP-binding enzyme family protein [Vibrio cholerae HC-50A1]
gi|424630421|ref|ZP_18068703.1| AMP-binding enzyme family protein [Vibrio cholerae HC-51A1]
gi|424634468|ref|ZP_18072566.1| AMP-binding enzyme family protein [Vibrio cholerae HC-52A1]
gi|424637547|ref|ZP_18075553.1| AMP-binding enzyme family protein [Vibrio cholerae HC-55A1]
gi|424641450|ref|ZP_18079330.1| AMP-binding enzyme family protein [Vibrio cholerae HC-56A1]
gi|424649523|ref|ZP_18087183.1| AMP-binding enzyme family protein [Vibrio cholerae HC-57A1]
gi|443528441|ref|ZP_21094477.1| AMP-binding enzyme family protein [Vibrio cholerae HC-78A1]
gi|124114037|gb|EAY32857.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae 1587]
gi|341635360|gb|EGS60078.1| AMP-binding enzyme family protein [Vibrio cholerae HC-02A1]
gi|408011114|gb|EKG48950.1| AMP-binding enzyme family protein [Vibrio cholerae HC-50A1]
gi|408017056|gb|EKG54578.1| AMP-binding enzyme family protein [Vibrio cholerae HC-52A1]
gi|408022056|gb|EKG59285.1| AMP-binding enzyme family protein [Vibrio cholerae HC-56A1]
gi|408022492|gb|EKG59701.1| AMP-binding enzyme family protein [Vibrio cholerae HC-55A1]
gi|408031293|gb|EKG67929.1| AMP-binding enzyme family protein [Vibrio cholerae HC-57A1]
gi|408053493|gb|EKG88507.1| AMP-binding enzyme family protein [Vibrio cholerae HC-51A1]
gi|408620689|gb|EKK93701.1| AMP-binding enzyme family protein [Vibrio cholerae HC-1A2]
gi|408634322|gb|EKL06585.1| AMP-binding enzyme family protein [Vibrio cholerae HC-55C2]
gi|408639779|gb|EKL11586.1| AMP-binding enzyme family protein [Vibrio cholerae HC-59A1]
gi|408640101|gb|EKL11902.1| AMP-binding enzyme family protein [Vibrio cholerae HC-60A1]
gi|408648734|gb|EKL20069.1| AMP-binding enzyme family protein [Vibrio cholerae HC-61A2]
gi|408852179|gb|EKL92023.1| AMP-binding enzyme family protein [Vibrio cholerae HC-02C1]
gi|408858681|gb|EKL98353.1| AMP-binding enzyme family protein [Vibrio cholerae HC-55B2]
gi|408866754|gb|EKM06131.1| AMP-binding enzyme family protein [Vibrio cholerae HC-59B1]
gi|443453260|gb|ELT17091.1| AMP-binding enzyme family protein [Vibrio cholerae HC-78A1]
Length = 601
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/435 (30%), Positives = 206/435 (47%), Gaps = 55/435 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+
Sbjct: 173 EQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVF 232
Query: 80 ERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ERA ++ +G Y V ++++ L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLV 292
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
R+V+ F + C + Q+QPS++ L H A
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------------LKQSHQFA 328
Query: 199 EKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 329 DKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDH 388
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
C S+G + ++KI E NE+L VRG VM+GY+K T ++ DE
Sbjct: 389 CFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLDKETAESFDEH 437
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
G+L TGD G I + G L + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 429
QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNELQK 547
Query: 430 ELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFRLLP 562
>gi|297581107|ref|ZP_06943032.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|417821798|ref|ZP_12468412.1| AMP-binding enzyme family protein [Vibrio cholerae HE39]
gi|423958046|ref|ZP_17735514.1| AMP-binding enzyme family protein [Vibrio cholerae HE-40]
gi|423985757|ref|ZP_17739070.1| AMP-binding enzyme family protein [Vibrio cholerae HE-46]
gi|297534933|gb|EFH73769.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|340039429|gb|EGR00404.1| AMP-binding enzyme family protein [Vibrio cholerae HE39]
gi|408656122|gb|EKL27224.1| AMP-binding enzyme family protein [Vibrio cholerae HE-40]
gi|408663415|gb|EKL34290.1| AMP-binding enzyme family protein [Vibrio cholerae HE-46]
Length = 601
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/435 (30%), Positives = 206/435 (47%), Gaps = 55/435 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+
Sbjct: 173 EQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVF 232
Query: 80 ERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ERA ++ +G Y V ++++ L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLV 292
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
R+V+ F + C + Q+QPS++ L H A
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------------LKQSHQFA 328
Query: 199 EKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 329 DKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDH 388
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
C S+G + ++KI E NE+L VRG VM+GY+K T ++ DE
Sbjct: 389 CFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLDKETAESFDEH 437
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
G+L TGD G I + G L + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 429
QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNDLQK 547
Query: 430 ELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFRLLP 562
>gi|384425421|ref|YP_005634779.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae LMA3984-4]
gi|327484974|gb|AEA79381.1| Long-chain-fatty-acid--CoA ligase [Vibrio cholerae LMA3984-4]
Length = 601
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/435 (30%), Positives = 206/435 (47%), Gaps = 55/435 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+
Sbjct: 173 EQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVF 232
Query: 80 ERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ERA ++ +G Y V ++++ L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLV 292
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
R+V+ F + C + Q+QPS++ L H A
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------------LKQSHQFA 328
Query: 199 EKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 329 DKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDH 388
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
C S+G + ++KI E NE+L VRG VM+GY+K T ++ DE
Sbjct: 389 CFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLDKETAESFDEH 437
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
G+L TGD G I + G L + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 429
QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNELQK 547
Query: 430 ELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFRLLP 562
>gi|330825047|ref|YP_004388350.1| long-chain-fatty-acid--CoA ligase [Alicycliphilus denitrificans
K601]
gi|329310419|gb|AEB84834.1| Long-chain-fatty-acid--CoA ligase [Alicycliphilus denitrificans
K601]
Length = 611
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 135/437 (30%), Positives = 206/437 (47%), Gaps = 48/437 (10%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS-LYDIVPAENGDKFLSMLPPWHVYERAC 83
+D+A VYTSGTTG PKGVMLTH N++ +++ L IVP + D FLS LP H +ER
Sbjct: 187 EDLAAIVYTSGTTGKPKGVMLTHANVIADVKAVLQRIVPTPD-DVFLSFLPLSHTFERTG 245
Query: 84 GYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
GY++ + G + Y +V L DD+ +P ++SVP +YE +++ + + + +S
Sbjct: 246 GYYLPVASGSCVAYARSVAQLADDMLTVRPTVLVSVPRIYERVHAKLIETLSSSP----- 300
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
++ A + FC + P A W R A+ WP L L
Sbjct: 301 -----WKMQLFQAAQAVGWRRFCAAQRLPAPQDDGA---GSWMR---ALPWP---LLRAL 346
Query: 202 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
V + + + G + VSGG LP I + +G+ + GYG+TE++PV++ N
Sbjct: 347 VARPLLARFGGRVRVAVSGGAPLPPAIAQCFLGLGLPLVQGYGMTETTPVVSVNALDDND 406
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
+VG + E++I G ++VRG VM+GY+K P T +A+ E GWL
Sbjct: 407 PSTVGRALPGVEVRI-----------GENRELQVRGPIVMKGYWKRPEDTARAIGEGGWL 455
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
TGD I GR R + GR K+ IV STGE V P +LE A L Q
Sbjct: 456 GTGDQAEIV----DGRIR-------ILGRIKEIIVTSTGEKVPPADLELAITADPLFEQA 504
Query: 381 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSF 440
V+G+ + + EE A +L + D + L+ + K +
Sbjct: 505 FVVGEQRPFIACVAAVQAEEWRQLAGQLGLDPDDPASLAHPSATRAALARIEKLAAGFPR 564
Query: 441 QIGP--IHVVDEPFTVN 455
P +H+V EP+T+
Sbjct: 565 YAVPRAVHLVREPWTIE 581
>gi|326336308|ref|ZP_08202479.1| long-chain-fatty-acid--CoA ligase [Capnocytophaga sp. oral taxon
338 str. F0234]
gi|325691482|gb|EGD33450.1| long-chain-fatty-acid--CoA ligase [Capnocytophaga sp. oral taxon
338 str. F0234]
Length = 596
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/435 (28%), Positives = 215/435 (49%), Gaps = 51/435 (11%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
DI T +YTSGTTG PKGV++ ++N+ +Q+ + + + + G+ +S LP HVYER
Sbjct: 180 DIYTIIYTSGTTGKPKGVLIDYENVAYQLINHDERLTVKEGNVSMSFLPLSHVYERLWLA 239
Query: 86 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
++ +G+ Y N + + L+ +PHYM VP + E +Y+ I + + S +R++
Sbjct: 240 YVLHKGVINCYLDDTNRVAEALKEVKPHYMCVVPRLLEKIYTKIYENVGKQSLIKRMI-- 297
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
SFA TR K + L + + IL L+ ++KLV++
Sbjct: 298 ----FSFA-------------TRTAK-----IHLKQKRKGKRVSFILQELYNFSDKLVFR 335
Query: 205 KIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ A+G + + GG+ L I F+ AIGV V +GYG+TE++ +A L S
Sbjct: 336 KLKEALGGNIQMIPCGGALLEPSIGRFFRAIGVNVTLGYGMTETTATVACWDIKFK-LKS 394
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
VG + + E+KI E NE+L ++G + +GY+ NP +A DG+ TG
Sbjct: 395 VGTVLPNIEVKI--GENNEIL---------LKGGSITKGYYNNPEENVKAFTSDGYFRTG 443
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D G++ G L + R K+ + S G+ + P ++E + S I QI +I
Sbjct: 444 DAGYLDKE----------GNLFITERIKELMKTSNGKYIAPQQIEGKVGKDSFIEQIAII 493
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI-SLLYGELRKWTSKCSF-- 440
++ A+IVP+ + ++ AK L++ + + S+L K I L+ +
Sbjct: 494 ADARKYVSALIVPNYDALVEYAKSLNLKYKNYSDLIKNSQIVDFFQKRLQNLQQGLAAYE 553
Query: 441 QIGPIHVVDEPFTVN 455
QI ++ PF++N
Sbjct: 554 QIKKFTLLTTPFSIN 568
>gi|323492601|ref|ZP_08097746.1| long-chain-fatty-acid--CoA ligase [Vibrio brasiliensis LMG 20546]
gi|323313159|gb|EGA66278.1| long-chain-fatty-acid--CoA ligase [Vibrio brasiliensis LMG 20546]
Length = 602
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/437 (29%), Positives = 203/437 (46%), Gaps = 55/437 (12%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ E DD+ T +YTSGTTG PKGVML + N+ Q+ + D L LP H
Sbjct: 171 RLEQANFDDLLTLIYTSGTTGQPKGVMLDYANIAAQLEGHDQRLSLSESDVSLCFLPLSH 230
Query: 78 VYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ERA +++ +G Y +++ L +P M +VP YE ++S I +++ +
Sbjct: 231 VFERAWTFYVLYKGATNCYLQDTMQVREALSEVRPTVMCAVPRFYEKIFSAIHEKVAKAP 290
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
R+V+ F + C + + PS + L +
Sbjct: 291 FIRKVL--------FTWAVNMGAKMALC-HQEGRNPSVM---------------LKKSYA 326
Query: 197 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 327 LADKLVLSKLRALLGGQINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWD 386
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
C S+G + ++KI D NE+L VRG VM+GY+K P T + D
Sbjct: 387 DKCFNPDSIGMSMPGAQVKIGD--NNEIL---------VRGPMVMRGYYKMPEETAKTFD 435
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
E G+L TGD G I + G L + R K+ + S G+ + P +E A +
Sbjct: 436 EHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSNGKYIAPQMIEGAIGKDH 485
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLL 427
I QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 486 FIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQIVEMLEKRVNDL 545
Query: 428 YGELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 546 QKELAKFEQVKKFKLLP 562
>gi|319762967|ref|YP_004126904.1| AMP-dependent synthetase/ligase [Alicycliphilus denitrificans BC]
gi|317117528|gb|ADV00017.1| AMP-dependent synthetase and ligase [Alicycliphilus denitrificans
BC]
Length = 611
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 135/437 (30%), Positives = 206/437 (47%), Gaps = 48/437 (10%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS-LYDIVPAENGDKFLSMLPPWHVYERAC 83
+D+A VYTSGTTG PKGVMLTH N++ +++ L IVP + D FLS LP H +ER
Sbjct: 187 EDLAAIVYTSGTTGKPKGVMLTHANVIADVKAVLQRIVPTPD-DVFLSFLPLSHTFERTG 245
Query: 84 GYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
GY++ + G + Y +V L DD+ +P ++SVP +YE +++ + + + +S
Sbjct: 246 GYYLPVASGSCVAYARSVAQLADDMLTVRPTVLVSVPRIYERVHAKLIETLSSSP----- 300
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
++ A + FC + P A W R A+ WP L L
Sbjct: 301 -----WKMQLFQAAQAVGWRRFCAAQRLPAPQDDGA---GSWMR---ALPWP---LLRAL 346
Query: 202 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
V + + + G + VSGG LP I + +G+ + GYG+TE++PV++ N
Sbjct: 347 VARPLLARFGGRVRVAVSGGAPLPPAIAQCFLGLGLPLVQGYGMTETTPVVSVNALDDND 406
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
+VG + E++I G ++VRG VM+GY+K P T +A+ E GWL
Sbjct: 407 PSTVGRALPGVEVRI-----------GENRELQVRGPIVMKGYWKRPEDTARAIGEGGWL 455
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
TGD I GR R + GR K+ IV STGE V P +LE A L Q
Sbjct: 456 GTGDQAEIV----DGRIR-------ILGRIKEIIVTSTGEKVPPADLELAITADPLFEQA 504
Query: 381 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSF 440
V+G+ + + EE A +L + D + L+ + K +
Sbjct: 505 FVVGEQRPFIACVAAVQAEEWRQLAGQLGLDPDDPASLAHPSATRAALARIEKLAAGFPR 564
Query: 441 QIGP--IHVVDEPFTVN 455
P +H+V EP+T+
Sbjct: 565 YAVPRAVHLVREPWTIE 581
>gi|226360993|ref|YP_002778771.1| long-chain fatty-acid--CoA ligase [Rhodococcus opacus B4]
gi|226239478|dbj|BAH49826.1| long-chain fatty-acid--CoA ligase [Rhodococcus opacus B4]
Length = 599
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/387 (31%), Positives = 193/387 (49%), Gaps = 62/387 (16%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFLSMLPPWHV 78
++D+A+ VYTSGTTG PKG +LTH+N L ++RSL D+ A G++ L+ LP HV
Sbjct: 176 ANDLASLVYTSGTTGRPKGCILTHRNFLSEVRSLLAAPIGDV--ARPGNRVLTFLPLAHV 233
Query: 79 YERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
RA +F G + ++ + + R++P+ ++ VP V+E + G A
Sbjct: 234 LARAVSLAMFEGGATQAHWSDFGTVTGEFARFRPNTILGVPRVFEKVRDG---------A 284
Query: 138 ARRVVARALIRISFAYTAFKRIY---EGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 194
AR+ + ++ KRI+ E + ++ Q + L L
Sbjct: 285 ARKAASGGGLQ--------KRIFDFAEATAVAYSEAQDTGGAPLR-----------LRLE 325
Query: 195 HLLAEKLVYKKIQSAIGISKA-GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 253
H LA++LVY K+++A+G +SGGG+L + F+ IGV V GYGLTES+
Sbjct: 326 HALADRLVYAKLRAALGGDCWWAISGGGALMPRLGHFFRGIGVPVYEGYGLTESTAAHCV 385
Query: 254 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 313
P +G+VG P+ ++I + G +++RG V GY++N AT++
Sbjct: 386 NVPGAQQIGTVGRPLGGNSVRIAE-----------DGEIELRGGVVFGGYWRNEHATREV 434
Query: 314 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 373
LD DGW TGD+G + G L + GR KD ++ + G+NV P LE+
Sbjct: 435 LD-DGWFRTGDLGDLDES----------GYLTITGRKKDLLITAGGKNVSPGPLEDRLRS 483
Query: 374 SSLIRQIVVIGQDQRRPGAIIVPDKEE 400
L+ Q VV+G + GA++ D +E
Sbjct: 484 HPLVSQAVVVGDARPFIGALLTVDPQE 510
>gi|451944815|ref|YP_007465451.1| acyl-CoA synthetase [Corynebacterium halotolerans YIM 70093 = DSM
44683]
gi|451904202|gb|AGF73089.1| acyl-CoA synthetase [Corynebacterium halotolerans YIM 70093 = DSM
44683]
Length = 610
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/389 (33%), Positives = 191/389 (49%), Gaps = 57/389 (14%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD------IVPAENGDKFLSMLPP 75
I +D+A+ VYTSGTTG PKG +LTH+N +HQIR+L VP G + L+ LP
Sbjct: 185 IRHEDLASLVYTSGTTGKPKGCILTHRNWIHQIRALLTHPIGAIAVP---GTRILTYLPM 241
Query: 76 WHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 134
HV RA + G + ++ V L + QR +PH ++ VP V+E +
Sbjct: 242 AHVLARAVSLAVVIGGATQSHWSDVSTLTVEFQRTRPHMILGVPRVFEKVR--------- 292
Query: 135 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 194
++AA + ++ A K E PS ++A AR
Sbjct: 293 NAAANKAADGGPLKAKIFERAEKTAVEYSKALDTPDGPSRVLA------AR--------- 337
Query: 195 HLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 253
L ++LVY K++SA+G + K ++GG ++ + F+ +G+ V GYGLTE+ AA
Sbjct: 338 RRLYDRLVYSKLKSAVGGAVKYCITGGSAMSPELRHFFRGVGLPVYEGYGLTETC-AAAA 396
Query: 254 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 313
T +G+VG P+ KI DA G + +RG V GY+ NP AT +A
Sbjct: 397 VDFTDVRIGTVGQPLGGYSAKINDA-----------GEICIRGEGVFAGYWNNPEATAEA 445
Query: 314 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 373
LD GW NTGD+G I G +++ GR KD IV + G+NV P LEE
Sbjct: 446 LDVGGWFNTGDLGEIDET----------GHIIITGRKKDLIVTAGGKNVSPAPLEEKLAS 495
Query: 374 SSLIRQIVVIGQDQRRPGAIIVPDKEEVL 402
LI Q +V+G + GA++ D++ +L
Sbjct: 496 HPLISQALVVGDGKPFIGALVTLDEDSLL 524
>gi|423304813|ref|ZP_17282812.1| hypothetical protein HMPREF1072_01752 [Bacteroides uniformis
CL03T00C23]
gi|423310073|ref|ZP_17288057.1| hypothetical protein HMPREF1073_02807 [Bacteroides uniformis
CL03T12C37]
gi|392682713|gb|EIY76055.1| hypothetical protein HMPREF1073_02807 [Bacteroides uniformis
CL03T12C37]
gi|392683477|gb|EIY76812.1| hypothetical protein HMPREF1072_01752 [Bacteroides uniformis
CL03T00C23]
Length = 601
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/441 (29%), Positives = 205/441 (46%), Gaps = 56/441 (12%)
Query: 23 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM--LPPWHVYE 80
DD+A +YTSGTTG PKGVML H N R ++DI D+ +SM LP HV+E
Sbjct: 178 SDDDLANILYTSGTTGEPKGVMLHHFNYREAFR-IHDIRLPFMTDQDVSMNFLPLTHVFE 236
Query: 81 RACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
+A Y RG+++ + ++++ ++ +P M SVP +E +Y+G+Q++I + R
Sbjct: 237 KAWTYLCIHRGVQVCINLRPQDIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKISQETGLR 296
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + I++ + R K P ++ L + E
Sbjct: 297 KAMMLDAIKVGRTH--------NIDYLRQGKTPPMMLHL---------------KYKFYE 333
Query: 200 KLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
K +Y ++ IGI + G ++P I F ++G+ + VGYGLTES+ ++
Sbjct: 334 KTIYALLKKTIGIENGNFFPTAGAAVPDEICEFVHSVGINMVVGYGLTESTATVSCFLNE 393
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
+GSVG + E+KI E NE+L +RG + GY+K P AT A+D +
Sbjct: 394 GYEIGSVGTVMPDVEVKI--GENNEIL---------LRGKTITTGYYKKPEATAAAIDRN 442
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GW +TGD G++ H L L R KD S G+ + P LE I
Sbjct: 443 GWFHTGDAGYLKDSH-----------LYLTERIKDLFKTSNGKYISPQALETKLAIDRYI 491
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 437
QI VI +++ A+IVP V AK I + + EL + I L+ R T +
Sbjct: 492 DQIAVIADERKFVSALIVPVYGFVKDYAKEKGIAYNNMDELLQHSKIQALF-RARIDTLQ 550
Query: 438 CSF----QIGPIHVVDEPFTV 454
F Q+ ++ EPF++
Sbjct: 551 QQFAHYEQVKRFTLLTEPFSM 571
>gi|256824009|ref|YP_003147969.1| AMP-forming long-chain acyl-CoA synthetase [Kytococcus sedentarius
DSM 20547]
gi|256687402|gb|ACV05204.1| AMP-forming long-chain acyl-CoA synthetase [Kytococcus sedentarius
DSM 20547]
Length = 606
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 193/410 (47%), Gaps = 51/410 (12%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDKFLSMLPP 75
+ E +G + +AT +YTSGTTG PK ML H+ + ++ + Y +P E+ L LP
Sbjct: 175 RCEGLGRETLATLIYTSGTTGRPKACMLPHRAFIDEVTAAYQGLPELFEDDSSTLLFLPL 234
Query: 76 WHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 135
HV+ R + + G +T + + DL ++P ++++VP V+E +Y + T
Sbjct: 235 AHVFGRMVHFAVIGAGARTGHTDIARVAKDLPVFKPTFVLAVPRVFEKIYESAHLKA-TK 293
Query: 136 SAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLH 195
++ A A Q Y AL A + +L H
Sbjct: 294 GGKEKIFAAA----------------------TQTAIDYSKALD----AGRVPLVLRAKH 327
Query: 196 LLAEKLVYKKIQSAIGISKA-GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
L KLVY K+Q+A G +SGG +L + ++ +GV + G+GLTE+S
Sbjct: 328 KLFTKLVYGKVQAAFGGELTWAISGGAALGERLGHYFRGMGVNIMEGWGLTETSAAATVN 387
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
RP+ +G+VG P+ E ++ D +G ++VRG V GY NP T + L
Sbjct: 388 RPSMQKIGTVGVPLPGFEARLSD-----------EGEIQVRGGHVFAGYENNPEETAKVL 436
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
EDGW +TGD+G I G L + GRAKD +V + G+NV P LE+
Sbjct: 437 AEDGWFSTGDLGEIDDD----------GFLRIIGRAKDILVTAAGKNVAPGPLEDILRSH 486
Query: 375 SLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 424
L+ + +V+G + A+I D+E++ K ASEL++++ +
Sbjct: 487 RLVSEAMVVGDGRPTVMALITLDEEQLPEWLKHHHREVVPASELTEDEQV 536
>gi|149907514|ref|ZP_01896261.1| long-chain acyl-CoA synthetase [Moritella sp. PE36]
gi|149809184|gb|EDM69113.1| long-chain acyl-CoA synthetase [Moritella sp. PE36]
Length = 595
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 201/408 (49%), Gaps = 52/408 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+ T +YTSGTTG PKGVML + N S ++ D ++ LP HV ER
Sbjct: 174 DDLVTLIYTSGTTGQPKGVMLDYTNFAAAFASHDKMIDVSETDTSIAFLPLSHVLERTWS 233
Query: 85 YFIFSRGIELMYTAVRNLK---DDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
+++ G + ++ + N K D + +P +++VP +YE +YS I ++ ++SA ++
Sbjct: 234 FYLMHSGAKNVH--LENPKLIIDVIAEVKPTLLVAVPRLYEKIYSTIHTRLESASAVKKA 291
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
+ ++ A+ F L + +QPS+ WL ++ H LA++L
Sbjct: 292 LFGWATKVGLAH---------FKLVHSNQQPSF------WLASQ---------HKLADRL 327
Query: 202 VYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
++ K++ +G + + GG + I+ F+++IG+++Q GYG+TE++ + R T
Sbjct: 328 IFSKLRGILGGNTRFLPCGGAKVDPDINQFFQSIGIQIQAGYGMTETTATVCCHRGTGYD 387
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
GS+G P+ E+KI D NE+L VR VM+GY+K P T++ DGWL
Sbjct: 388 FGSIGLPLPDMEVKIGD--DNEIL---------VRSDTVMKGYYKMPEETEKNF-IDGWL 435
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
TGD G I G +V+ R K+ + S G+ + P +E + I Q+
Sbjct: 436 KTGDAGKIL----------ANGEVVMTERIKELMKTSNGKYIAPQLVEGTLNKDHFIDQV 485
Query: 381 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
+ + A+IVP + + A +++ + +EL + I ++
Sbjct: 486 AIFADSRHFVSALIVPSFDALEEYANSINLQFSSKAELLRHSHIVTMF 533
>gi|269137982|ref|YP_003294682.1| AMP-binding enzyme-family protein [Edwardsiella tarda EIB202]
gi|387866716|ref|YP_005698185.1| long-chain-fatty-acid--CoA ligase [Edwardsiella tarda FL6-60]
gi|267983642|gb|ACY83471.1| putative AMP-binding enzyme-family protein [Edwardsiella tarda
EIB202]
gi|304558029|gb|ADM40693.1| Long-chain-fatty-acid--CoA ligase [Edwardsiella tarda FL6-60]
Length = 600
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 200/409 (48%), Gaps = 49/409 (11%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI-VPAENGDKFLSMLPPWHVYERAC 83
DD+ T +YTSGTTG PKGVML +++L Q+ L+D + D L LP HV+ERA
Sbjct: 180 DDLFTLIYTSGTTGEPKGVMLDYRSLAAQL-YLHDARLNVGEQDVSLCFLPLSHVFERAW 238
Query: 84 GYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
+++ G + +Y NL ++ +Q +P M +VP YE ++S +Q ++ + RR +
Sbjct: 239 SFYVMHSGAQNVYLHDTNLVREAMQAVRPTMMCAVPRFYEKIFSAVQAKVAQAPWLRRQL 298
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
R + + +R L +P R++ A +H LA++LV
Sbjct: 299 FRWAV-----WCGEQRF-----LRERAARPQ----------GRLMTA----MHRLADRLV 334
Query: 203 YKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
K+++ +G + + G L H+ LF++A+G+ ++ GYG+TE+ ++
Sbjct: 335 LAKLRAILGGRVRFLPAAGAKLDDHVILFFQALGLNIKYGYGMTETCATVSCWEEQDFRF 394
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
GS+G P+ E++I E NE+ +VRG VM+GYF P T Q DGWL
Sbjct: 395 GSIGRPLPGVEVRI--GEENEI---------QVRGPIVMRGYFNKPQETAQTFTADGWLK 443
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD G + G L + R KD + S G+ + P +E R I Q+
Sbjct: 444 TGDAGALDAQ----------GHLFITERLKDLMKTSNGKYIAPQLVEGTLARDRFIEQVA 493
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
VI ++ A+IVP + + A+ +++ + D +L + I L+ +
Sbjct: 494 VIADARKFVSALIVPCFDSLEEYARSINLKYHDRLDLLRHSHIVALFEQ 542
>gi|416893219|ref|ZP_11924505.1| long chain fatty acid CoA ligase [Aggregatibacter aphrophilus ATCC
33389]
gi|347814247|gb|EGY30897.1| long chain fatty acid CoA ligase [Aggregatibacter aphrophilus ATCC
33389]
Length = 578
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 135/452 (29%), Positives = 209/452 (46%), Gaps = 67/452 (14%)
Query: 12 IAGKHYKYETIGS------DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAEN 65
+AG+ Y+ E +D+ T +YTSGTTG PKGVML + NL HQ+++ + ++
Sbjct: 141 MAGEQYQTELQQRLDGKCLEDLFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDQALKVDD 200
Query: 66 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETL 124
D LS LP H++ERA ++ RG Y N ++ L +P M +VP YE +
Sbjct: 201 SDVSLSFLPLSHIFERAWVAYVLHRGATNCYIEDTNQVRSALTEIRPTLMCAVPRFYEKI 260
Query: 125 YSGIQKQIFTSSAARRVV---ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 181
Y+ I ++ + R+ + A A+ R F L++ QK
Sbjct: 261 YTAILDKVHNAPQLRQWIFHWAMAIGRQHFD-----------ILSKGQK----------- 298
Query: 182 LWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQV 240
I +L + LA KLV K+++ +G + GG L I LF+ +IG+ +++
Sbjct: 299 -----IGFLLKQQYALANKLVLGKLRALLGGRIRMMPCGGAKLEPTIGLFFHSIGLNIKL 353
Query: 241 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 300
GYG+TE++ ++ S+G + E+KI E NE+L VRG VM
Sbjct: 354 GYGMTETTATVSCWDDVNFNANSIGSLMPGAEVKI--GENNEIL---------VRGGMVM 402
Query: 301 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 360
+GY+K P T +A DG+L TGD G G L + R K+ + S G+
Sbjct: 403 KGYYKKPQETAEAFTADGFLKTGDAG----------EFDANGNLYITDRIKELMKTSNGK 452
Query: 361 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 420
+ P LE + I QI VI ++ A+IVP + AK+++I + D EL K
Sbjct: 453 YIAPQVLESKIGKDKFIEQIAVIADAKKYVSALIVPCYTALEEYAKQVNIKYQDRLELLK 512
Query: 421 --------EKTISLLYGELRKWTSKCSFQIGP 444
E+ I+ L EL W F + P
Sbjct: 513 NSEIIQMLERRINDLQKELAGWEQIKRFTLLP 544
>gi|145223549|ref|YP_001134227.1| AMP-dependent synthetase and ligase [Mycobacterium gilvum PYR-GCK]
gi|315443896|ref|YP_004076775.1| AMP-forming long-chain acyl-CoA synthetase [Mycobacterium gilvum
Spyr1]
gi|145216035|gb|ABP45439.1| AMP-dependent synthetase and ligase [Mycobacterium gilvum PYR-GCK]
gi|315262199|gb|ADT98940.1| AMP-forming long-chain acyl-CoA synthetase [Mycobacterium gilvum
Spyr1]
Length = 601
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 127/386 (32%), Positives = 182/386 (47%), Gaps = 53/386 (13%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE--NGDKFLSMLPP 75
+ +I S D AT +YTSGTTG PKG LTH NLL++IR P G+K L LP
Sbjct: 175 RVASIRSTDAATLIYTSGTTGRPKGCQLTHSNLLYEIRGAKACFPEHLAKGEKLLVFLPL 234
Query: 76 WHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 134
HV RA FS G+ L +T+ ++NL +QP ++SVP V+E +Y+ + T
Sbjct: 235 AHVLARALTIGAFSNGVTLGFTSDIKNLVPMFAVFQPTLVVSVPRVFEKVYNTAELNAET 294
Query: 135 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 194
+ A A I ++ K + G P ++ L
Sbjct: 295 GGKGKIFTAAANTAIEYS----KALDSG--------GPGLVLKL---------------K 327
Query: 195 HLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 253
H L +KLVY K+++A+G A +SGG L + FY +G+ + GYGLTE+S I
Sbjct: 328 HALFDKLVYGKLRAALGGRCHAAISGGAPLGARLGHFYRGVGLSIYEGYGLTETSAAITV 387
Query: 254 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 313
R +GSVG + +++ G G + VRG V GY+ N T+ A
Sbjct: 388 NRVGDLRVGSVGKLVPGNSMRL-----------GEDGELLVRGGVVFNGYWGNEEETR-A 435
Query: 314 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 373
+ DGW +TGD+G I G L + GR K+ IV + G+NV P +LE+
Sbjct: 436 VFTDGWFHTGDLGAIDDD----------GFLTIVGRKKEIIVTAGGKNVAPAQLEDRLRA 485
Query: 374 SSLIRQIVVIGQDQRRPGAIIVPDKE 399
LI Q + +G Q A+I D E
Sbjct: 486 HPLISQAMAVGDQQPFIAALITVDTE 511
>gi|145636795|ref|ZP_01792461.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittHH]
gi|145270093|gb|EDK10030.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittHH]
Length = 599
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 191/407 (46%), Gaps = 47/407 (11%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 178 DLFTIIYTSGTTGEPKGVMLDYANLAHQLETHDLSLNVTDQDISLSFLPFSHIFERAWAA 237
Query: 86 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 238 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 297
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
I + + F L N K +L L LA+KLV
Sbjct: 298 WAISVGQKH---------FDLRANNKAIPFL---------------LKKQFALADKLVLS 333
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 334 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 393
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
+G + E+KI E NE+L VRG VM+GY+K P T Q EDG+L TG
Sbjct: 394 IGTLMPKAEVKI--GENNEIL---------VRGGMVMKGYYKKPEETAQTFTEDGFLKTG 442
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 443 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 492
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
++ A+IVP + + AK+L+I + D EL K I ++ +
Sbjct: 493 ADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSDILKMFEQ 539
>gi|421352186|ref|ZP_15802551.1| AMP-binding enzyme family protein [Vibrio cholerae HE-25]
gi|395952631|gb|EJH63245.1| AMP-binding enzyme family protein [Vibrio cholerae HE-25]
Length = 601
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/435 (30%), Positives = 206/435 (47%), Gaps = 55/435 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+
Sbjct: 173 EQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVF 232
Query: 80 ERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ERA ++ +G Y V ++++ L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLV 292
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
R+V+ F + C + Q+QPS++ L H A
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------------LKQSHQFA 328
Query: 199 EKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 329 DKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDH 388
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
C S+G + ++KI E NE+L VRG VM+GY+K T ++ DE
Sbjct: 389 CFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLDKETAESFDEH 437
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
G+L TGD G I + G L + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 429
QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCFDSLEEYAKDLNIKYHDRLELIKHSQVLEMFEKRVNELQK 547
Query: 430 ELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFRLLP 562
>gi|237720321|ref|ZP_04550802.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|336415414|ref|ZP_08595754.1| hypothetical protein HMPREF1017_02862 [Bacteroides ovatus
3_8_47FAA]
gi|423290471|ref|ZP_17269320.1| hypothetical protein HMPREF1069_04363 [Bacteroides ovatus
CL02T12C04]
gi|423294228|ref|ZP_17272355.1| hypothetical protein HMPREF1070_01020 [Bacteroides ovatus
CL03T12C18]
gi|229450072|gb|EEO55863.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|335941010|gb|EGN02872.1| hypothetical protein HMPREF1017_02862 [Bacteroides ovatus
3_8_47FAA]
gi|392665858|gb|EIY59381.1| hypothetical protein HMPREF1069_04363 [Bacteroides ovatus
CL02T12C04]
gi|392675419|gb|EIY68860.1| hypothetical protein HMPREF1070_01020 [Bacteroides ovatus
CL03T12C18]
Length = 604
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/443 (29%), Positives = 207/443 (46%), Gaps = 54/443 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHV 78
E DD+A +YTSGTTG PKGVML H L Q + D + + D ++ LP HV
Sbjct: 175 ERASYDDLANILYTSGTTGEPKGVMLHHSCYLEQFHTHDDRLTTMSDKDVSMNFLPLTHV 234
Query: 79 YERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
+E+A Y +G+++ + +++ ++ +P M SVP +E +Y+G+Q++I ++
Sbjct: 235 FEKAWCYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKINETTG 294
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
++ + IR+ RI+ R K P + L +
Sbjct: 295 LKKALMLDAIRVG-------RIH-NLDYLRLGKTPPVMNQL---------------KYKF 331
Query: 198 AEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
EK +Y ++ IGI + G ++P I+ F ++G+ + VGYGLTES+ ++
Sbjct: 332 YEKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVGYGLTESTATVSCTL 391
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
P +GSVG + E+KI E NE+L +RG + +GY+K AT A++
Sbjct: 392 PVGYDIGSVGVVLPGIEVKI--GEDNEIL---------LRGKTITKGYYKKAEATAAAIE 440
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
DGW +TGD G+ G L L R KD S G+ V P LE +
Sbjct: 441 PDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNGKYVAPQALETKLVIDR 489
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT 435
I QI +I ++ A+IVP V AK I + D +EL + I L+ R T
Sbjct: 490 YIDQIAIIADQRKFVSALIVPVYGFVKEYAKEKGIEYKDMTELLQHPKIVGLF-RARIDT 548
Query: 436 SKCSF----QIGPIHVVDEPFTV 454
+ F QI ++ EPF++
Sbjct: 549 LQQQFAHYEQIKRFTLLPEPFSM 571
>gi|417850883|ref|ZP_12496700.1| FadD [Pasteurella multocida subsp. gallicida str. Anand1_poultry]
gi|338220259|gb|EGP05803.1| FadD [Pasteurella multocida subsp. gallicida str. Anand1_poultry]
Length = 606
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 199/410 (48%), Gaps = 50/410 (12%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRS---LYDIVPAENGDKFLSMLPPWHVYERA 82
D+ T +YTSGTTG PKGVML + NL HQ+++ + + D LS LP H++ERA
Sbjct: 179 DLFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDEAFTTLNVSQYDSSLSFLPLSHIFERA 238
Query: 83 CGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
++ RG Y N +++ L +P M +VP YE +Y+ + ++ + RR+
Sbjct: 239 WVAYVLHRGAVNCYLEDTNRVREALSEIRPTLMCAVPRFYEKIYTAVWDKVQKAPLFRRM 298
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
+ ++A ++ ++ +QK+P I +L + LA+KL
Sbjct: 299 I------FNWAIVVGQKCFQFI----SQKKP--------------IPFVLRQQYALADKL 334
Query: 202 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
V K++ +G + GG L +I LF+ +IG+ V++GYG+TE++ ++
Sbjct: 335 VLSKLRQLLGGRIRMMPCGGAKLEPNIGLFFHSIGINVKLGYGMTETTATVSCWEEGHFE 394
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
S+G + E+KI E NE+L VRG VM+GY+K P T + EDG+L
Sbjct: 395 PNSIGTLMPGAEVKI--GENNEIL---------VRGGMVMRGYYKKPQETADSFTEDGFL 443
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
TGD G P G L + R K+ + S G+ + P +E + I QI
Sbjct: 444 KTGDAGEFDPQ----------GNLYITDRIKELMKTSNGKYIAPQYIETKVGKDKFIEQI 493
Query: 381 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
VI ++ A+IVP + AK+L+I + D EL K I ++ +
Sbjct: 494 AVIADAKKYVSALIVPCFNSLEEYAKQLNIKYHDRLELIKHSDILQMFEQ 543
>gi|378773920|ref|YP_005176163.1| putative long-chain-fatty-acid--CoA ligase [Pasteurella multocida
36950]
gi|356596468|gb|AET15194.1| putative long-chain-fatty-acid--CoA ligase [Pasteurella multocida
36950]
Length = 606
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 197/410 (48%), Gaps = 50/410 (12%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRS---LYDIVPAENGDKFLSMLPPWHVYERA 82
D+ T +YTSGTTG PKGVML + NL HQ+++ + + D LS LP H++ERA
Sbjct: 179 DLFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDEAFTTLNVSQYDSSLSFLPLSHIFERA 238
Query: 83 CGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
++ RG Y N +++ L +P M +VP YE +Y+ + ++ + RR+
Sbjct: 239 WVAYVLHRGAVNCYLEDTNRVREALSEIRPTLMCAVPRFYEKIYTAVWDKVQKAPLFRRM 298
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
+ I + F+ I +QK+P I +L + LA+KL
Sbjct: 299 IFNWAIAV--GQKRFQFI--------SQKKP--------------IPFVLRQQYALADKL 334
Query: 202 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
V K++ +G + GG L +I LF+ +IG+ V++GYG+TE++ ++
Sbjct: 335 VLSKLRQLLGGRIRMMPCGGAKLEPNIGLFFHSIGINVKLGYGMTETTATVSCWEEGHFE 394
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
S+G + E+KI E NE+L VRG VM+GY+K P T + EDG+L
Sbjct: 395 PNSIGTLMPGAEVKI--GENNEIL---------VRGGMVMRGYYKKPQETADSFTEDGFL 443
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
TGD G P G L + R K+ + S G+ + P +E + I QI
Sbjct: 444 KTGDAGEFDPQ----------GNLYITDRIKELMKTSNGKYIAPQYIETKVGKDKFIEQI 493
Query: 381 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
VI ++ A+IVP + AK+L+I + D EL K I ++ +
Sbjct: 494 AVIADAKKYVSALIVPCFNSLEEYAKQLNIKYHDRLELIKHSDILQMFEQ 543
>gi|343500486|ref|ZP_08738379.1| long-chain-fatty-acid--CoA ligase [Vibrio tubiashii ATCC 19109]
gi|418481417|ref|ZP_13050460.1| long-chain-fatty-acid--CoA ligase [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
gi|342820330|gb|EGU55154.1| long-chain-fatty-acid--CoA ligase [Vibrio tubiashii ATCC 19109]
gi|384570934|gb|EIF01477.1| long-chain-fatty-acid--CoA ligase [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
Length = 602
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/437 (29%), Positives = 201/437 (45%), Gaps = 55/437 (12%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ E DD+ T +YTSGTTG PKGVM+ + N+ Q+ + D L LP H
Sbjct: 171 RLEQANLDDLLTLIYTSGTTGQPKGVMVDYANIGAQLEGHDQRLSLSQSDVSLCFLPLSH 230
Query: 78 VYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ERA ++ +G Y ++D L +P M +VP YE ++S I +++ +
Sbjct: 231 VFERAWTFYALYKGATNCYLQDTMQVRDALSEVRPTVMCAVPRFYEKIFSAIHEKVAKAP 290
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
R+V+ F + C +K PS L H
Sbjct: 291 FIRKVL--------FTWAVNMGAKMAVCHQEGRK-PSI---------------ALKKSHA 326
Query: 197 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 327 LADKLVLSKLRALLGGQINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWD 386
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
C S+G + ++KI E NE+L VRG VM+GY+K P T + D
Sbjct: 387 DKCFNPDSIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETAKTFD 435
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
E G+L TGD G I + G L + R K+ + S G+ + P +E A +
Sbjct: 436 EHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQMIEGAIGKDH 485
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLL 427
I QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 486 FIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQVVEMLEKRVNEL 545
Query: 428 YGELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 546 QQELAKFEQVKKFKLLP 562
>gi|444432653|ref|ZP_21227805.1| long-chain fatty-acid--CoA ligase [Gordonia soli NBRC 108243]
gi|443886574|dbj|GAC69526.1| long-chain fatty-acid--CoA ligase [Gordonia soli NBRC 108243]
Length = 601
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/382 (30%), Positives = 181/382 (47%), Gaps = 59/382 (15%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD------IVPAENGDKFLSMLPPWHVY 79
D AT +YTSGTTG PKG MLTH NLL +I ++ + + P G + L LP HV
Sbjct: 182 DPATLIYTSGTTGRPKGCMLTHANLLSEIYAVLEGNLSTLLAP---GRRMLMFLPMAHVL 238
Query: 80 ERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
RA G+E+ +T+ + NL + ++P ++SVP V+E +++ +++
Sbjct: 239 ARAITLVAIEAGVEVGFTSDIPNLVPEFAVFKPSLILSVPRVFEKVFASARQKAHDDGKG 298
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
R A A + ++ G L H L
Sbjct: 299 RIFDAAATTAVEYSEALGTDSGPGIVLRAK--------------------------HRLF 332
Query: 199 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+ LVY K+++A+G + +SGG L + F+ IG+ V GYGLTE++ A P
Sbjct: 333 DALVYGKLRAALGGDCELAISGGAPLGARLGHFFRGIGIPVYEGYGLTETTAAFAVNTPG 392
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
+ +G+VG P+ +++ G G V + G V GY++NP AT AL ED
Sbjct: 393 EHKVGTVGKPLAGNSVRL-----------GEDGEVLLSGGVVFDGYWQNPEATASAL-ED 440
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GW +TGD+G I G + + GR K+ IV + G+NV P LE+ + L+
Sbjct: 441 GWFHTGDLGRIDDE----------GFITITGRKKELIVTAGGKNVSPAGLEDVIRANPLV 490
Query: 378 RQIVVIGQDQRRPGAIIVPDKE 399
Q +V+G +Q GA++ D E
Sbjct: 491 SQALVVGDNQPFIGALVTIDPE 512
>gi|15602790|ref|NP_245862.1| FadD protein [Pasteurella multocida subsp. multocida str. Pm70]
gi|383309925|ref|YP_005362735.1| long-chain acyl--CoA synthetase [Pasteurella multocida subsp.
multocida str. HN06]
gi|12721245|gb|AAK03009.1| FadD [Pasteurella multocida subsp. multocida str. Pm70]
gi|380871197|gb|AFF23564.1| long-chain acyl--CoA synthetase [Pasteurella multocida subsp.
multocida str. HN06]
Length = 606
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 197/410 (48%), Gaps = 50/410 (12%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRS---LYDIVPAENGDKFLSMLPPWHVYERA 82
D+ T +YTSGTTG PKGVML + NL HQ+++ + + D LS LP H++ERA
Sbjct: 179 DLFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDEAFTTLNVSQYDSSLSFLPLSHIFERA 238
Query: 83 CGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
++ RG Y N +++ L +P M +VP YE +Y+ + ++ + RR+
Sbjct: 239 WVAYVLHRGAVNCYLEDTNRVREALSEIRPTLMCAVPRFYEKIYTAVWDKVQKAPLFRRM 298
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
+ I + F+ I +QK+P I +L + LA+KL
Sbjct: 299 IFNWAIAV--GQKRFQFI--------SQKKP--------------IPFVLRQQYALADKL 334
Query: 202 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
V K++ +G + GG L +I LF+ +IG+ V++GYG+TE++ ++
Sbjct: 335 VLSKLRQLLGGRIRMMPCGGAKLEPNIGLFFHSIGINVKLGYGMTETTATVSCWEEGHFE 394
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
S+G + E+KI E NE+L VRG VM+GY+K P T + EDG+L
Sbjct: 395 PNSIGTLMPGAEVKI--GENNEIL---------VRGGMVMRGYYKKPQETADSFTEDGFL 443
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
TGD G P G L + R K+ + S G+ + P +E + I QI
Sbjct: 444 KTGDAGEFDPQ----------GNLYITDRIKELMKTSNGKYIAPQYIETKVGKDKFIEQI 493
Query: 381 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
VI ++ A+IVP + AK+L+I + D EL K I ++ +
Sbjct: 494 AVIADAKKYVSALIVPCFNSLEEYAKQLNIKYHDRLELIKHSDILQMFEQ 543
>gi|425065789|ref|ZP_18468909.1| Long-chain-fatty-acid--CoA ligase [Pasteurella multocida subsp.
gallicida P1059]
gi|404383284|gb|EJZ79738.1| Long-chain-fatty-acid--CoA ligase [Pasteurella multocida subsp.
gallicida P1059]
Length = 606
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 197/410 (48%), Gaps = 50/410 (12%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRS---LYDIVPAENGDKFLSMLPPWHVYERA 82
D+ T +YTSGTTG PKGVML + NL HQ+++ + + D LS LP H++ERA
Sbjct: 179 DLFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDEAFTTLNVSQYDSSLSFLPLSHIFERA 238
Query: 83 CGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
++ RG Y N +++ L +P M +VP YE +Y+ + ++ + RR+
Sbjct: 239 WVAYVLHRGAVNCYLEDTNRVREALSEIRPTLMCAVPRFYEKIYTAVWDKVQKAPLFRRM 298
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
+ I + F+ I +QK+P I +L + LA+KL
Sbjct: 299 IFNWAIAV--GQKRFQFI--------SQKKP--------------IPFVLRQQYALADKL 334
Query: 202 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
V K++ +G + GG L +I LF+ +IG+ V++GYG+TE++ ++
Sbjct: 335 VLSKLRQLLGGRIRMMPCGGAKLEPNIGLFFHSIGINVKLGYGMTETTATVSCWEEGHFE 394
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
S+G + E+KI E NE+L VRG VM+GY+K P T + EDG+L
Sbjct: 395 PNSIGTLMPGAEVKI--GENNEIL---------VRGGMVMRGYYKKPQETADSFTEDGFL 443
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
TGD G P G L + R K+ + S G+ + P +E + I QI
Sbjct: 444 KTGDAGEFDPQ----------GNLYITDRIKELMKTSNGKYIAPQYIETKVGKDKFIEQI 493
Query: 381 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
VI ++ A+IVP + AK+L+I + D EL K I ++ +
Sbjct: 494 AVIADAKKYVSALIVPCFNSLEEYAKQLNIKYHDRLELIKHSDILQMFEQ 543
>gi|456825826|gb|EMF74204.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
LT1962]
Length = 479
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/303 (33%), Positives = 165/303 (54%), Gaps = 12/303 (3%)
Query: 16 HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFL 70
H + I +D+AT VYTSGTTG PKGVMLTHKN++ + S ++ P D+ +
Sbjct: 182 HKRGSAIREEDLATIVYTSGTTGKPKGVMLTHKNIVFNVDSALQGEDLNVYPT---DRSM 238
Query: 71 SMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQK 130
+ LPPWH+ ER G +T++ +L DL +P ++SVP V+E+LY+ I
Sbjct: 239 AYLPPWHIAERLVETVCIRAGGAEAFTSISSLSQDLADIKPTLLLSVPRVWESLYNKIHD 298
Query: 131 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 190
++ SS ++ + A I+ Y +K + L + + S +L L + I +
Sbjct: 299 KVRNSSPVQQALFGAFKEIAITY--YKHLSRLQNLEYSLTEQSTFASLWQKLISFWIVIL 356
Query: 191 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
LW + +++ L + KI+ +G K +SG G+LP +ID F+ AIG+ + GYG+TE S
Sbjct: 357 LWIPNQISQ-LAFNKIKQGLGGELKFALSGAGALPQYIDTFFNAIGIPILEGYGMTELSG 415
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
+ R +G++G I +IK++D + NE+ G KGI +G VM+GY+K P
Sbjct: 416 ISTRRILGEITVGTLGRCIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYKEPEK 475
Query: 310 TKQ 312
K+
Sbjct: 476 RKR 478
>gi|325103741|ref|YP_004273395.1| AMP-dependent synthetase and ligase [Pedobacter saltans DSM 12145]
gi|324972589|gb|ADY51573.1| AMP-dependent synthetase and ligase [Pedobacter saltans DSM 12145]
Length = 640
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 190/396 (47%), Gaps = 64/396 (16%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACG 84
D++ +YTSGTTG PKGVMLTH+N + +R + +P E D FLS LP HV+ER
Sbjct: 194 DLSALIYTSGTTGTPKGVMLTHRNFVENVRECLNQIPVIEPDDIFLSFLPLSHVFERTAT 253
Query: 85 YFI---------FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 135
Y++ F++ +EL L +++ +P + VP + E ++ K ++
Sbjct: 254 YYVCCAMGSQIAFAQSLEL-------LAKNMEEVKPMVISCVPRLLEKIHDKAIKSGTST 306
Query: 136 SAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLH 195
A+ + I + K K+P +++ +
Sbjct: 307 GGAKAKIFLWAFDIGQKHRTIKEA---------GKKPGLKLSI---------------QY 342
Query: 196 LLAEKLVYKKI-QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
+A+KLV+ KI + G K +SGG +LP ++ F+ +G+K+ G+GLTE+SPV++
Sbjct: 343 AIAQKLVFSKIIEKTGGRLKFMISGGAALPKNVGEFFGNLGIKILEGFGLTETSPVMSVT 402
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLP-----------AGSKGIVKVRGSQVMQGY 303
V G+VG I E+ + D ET E + +G + VRG VM+GY
Sbjct: 403 EFNRQVYGTVGRVIPGIEVGVQDVETKEFVTIQTYSSFNPNFTSEEGEIVVRGHCVMKGY 462
Query: 304 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 363
+ P T Q +D +GW +TGD+G R G L + R K+ +V + G+N+
Sbjct: 463 WNKPEETAQVIDSNGWFHTGDVG-----------RFYLGNLQITDRIKNMLVNAFGKNIY 511
Query: 364 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
P +E L+S I + +IG + AII+P +E
Sbjct: 512 PTPVENTYLKSPKIEGVFLIGDKREYVTAIIIPARE 547
>gi|153871945|ref|ZP_02000979.1| AMP-dependent synthetase and ligase [Beggiatoa sp. PS]
gi|152071588|gb|EDN69020.1| AMP-dependent synthetase and ligase [Beggiatoa sp. PS]
Length = 602
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/389 (30%), Positives = 201/389 (51%), Gaps = 49/389 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
D++A+ VYTSGTTG PKGVML+H+N+L ++ + D+FLS LP H +ER G
Sbjct: 183 DEMASIVYTSGTTGRPKGVMLSHRNMLGNAQAAASCIEFSYEDRFLSFLPLSHTFERTGG 242
Query: 85 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y++ G + Y +++ + DL +P ++SVP +YE +Y+ IQ Q+ S R +
Sbjct: 243 YYLPMVVGANVAYARSIQQIAQDLIALRPTILMSVPRIYEQVYAKIQNQLDKKSPLARHL 302
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
+++ + + + ++G R P L+ + L L K V
Sbjct: 303 FTLGVQVGWRHFEY---HQG----RASWHPKLLLWPL--------------LRRLVAKPV 341
Query: 203 YKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K+ G + +SGG +L + + +G+ + GYGLTE+SP+I+ RP N+
Sbjct: 342 LDKLG---GRMRLAISGGAALSPKVAQLFVGLGLNLLQGYGLTETSPIISVNRPNDNIPD 398
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G + ++K+ E +E+L + +M GY+KN AT+ +D+DGWL+T
Sbjct: 399 SIGTTLPDVKVKL--GENDELL---------TQSPYIMLGYWKNSEATQNMIDKDGWLHT 447
Query: 323 GDIGWIAPHHSRGRSRRCG-GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
GD ++R+ G L + GR K+ IV+ GE V P ++E SL Q++
Sbjct: 448 GD-----------KARQDAIGHLYITGRIKEIIVMGNGEKVPPTDMEMVIGTDSLFEQVM 496
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSI 410
+IG+ + A++V + E+ + AK L+I
Sbjct: 497 IIGEGKPFLAALVVLNIEQWHLFAKDLTI 525
>gi|383191633|ref|YP_005201761.1| AMP-forming long-chain acyl-CoA synthetase [Rahnella aquatilis CIP
78.65 = ATCC 33071]
gi|371589891|gb|AEX53621.1| AMP-forming long-chain acyl-CoA synthetase [Rahnella aquatilis CIP
78.65 = ATCC 33071]
Length = 598
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/437 (29%), Positives = 211/437 (48%), Gaps = 54/437 (12%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+ T +YTSGTTG KGVML ++++ Q+R + D L LP HV+ERA +
Sbjct: 180 DLFTLIYTSGTTGEAKGVMLDYRSMATQLRQHEKRLSISEHDVSLCFLPLAHVFERAWSF 239
Query: 86 FIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
F+ G + ++ ++D LQ +P M +VP YE ++S I + VAR
Sbjct: 240 FVMHCGAQNVFLRETDRVRDALQAIKPTVMCAVPRFYEKVFSAIHDK----------VAR 289
Query: 145 A-LIRISFAYTAFKRIYEGFCLTRN-QKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
A ++ + A + E F + R ++ P +L P H LA+KLV
Sbjct: 290 AGTLKKRLFHWAVAQGKEKFLIERRGERYPFWLT----------------PAHFLADKLV 333
Query: 203 YKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
KK++ +G + + + G SL ++ LF+E++G+K++ GYGLTE+ +
Sbjct: 334 LKKLRDLLGGNLRFLPAAGASLDDNVILFFESLGLKIKYGYGLTETCATVTCWEEHDFRF 393
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
GSVG + E++I E NE ++VRG +++GYF P T + DGW
Sbjct: 394 GSVGTALPEIEVRI--GEENE---------IQVRGPTLLRGYFNKPEETAASFTSDGWFK 442
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD G + G V + E R KD + S G+ + P +E ++ I Q
Sbjct: 443 TGDAGKMDAQ---------GNVFITE-RLKDLMKTSGGKYIAPQRIEGTLVQDRYIEQAA 492
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK-EKTISLLYGELRKWTSKCS- 439
VI ++ A+IVPD + + + A+ I + + + L K E+ +SL +LR+ +
Sbjct: 493 VIADERHFVSALIVPDFDVLNVYAQAHHIDYLNRTGLVKNEQILSLFAHQLREIQHDLAG 552
Query: 440 -FQIGPIHVVDEPFTVN 455
Q+ ++ +PFT+
Sbjct: 553 FEQVKKFVLLTKPFTME 569
>gi|329964579|ref|ZP_08301633.1| AMP-binding enzyme [Bacteroides fluxus YIT 12057]
gi|328524979|gb|EGF52031.1| AMP-binding enzyme [Bacteroides fluxus YIT 12057]
Length = 645
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 132/441 (29%), Positives = 203/441 (46%), Gaps = 54/441 (12%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYE 80
+ S DIA +YTSGTTG PKGVML H N + R+ +P+ + D +S LP HV+E
Sbjct: 221 VSSADIANILYTSGTTGEPKGVMLMHYNYMEAFRTHEIRIPSLTDQDVSMSFLPLTHVFE 280
Query: 81 RACGYFIFSRGIELMYTAV-RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
R Y RG ++ ++++ ++ +P M SVP +E +Y G+Q++I + +
Sbjct: 281 RGWTYVCLQRGAQVCVNLRPQDIQTTIKEIRPTVMCSVPRFWEKVYQGVQERIEQETGLK 340
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + I++ A+ R K P ++ L + E
Sbjct: 341 KAMMLDAIKVGRAH--------NLDYLRLGKTPPLMLHL---------------KYKFYE 377
Query: 200 KLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
K VY ++ IGI + G ++ + F ++G+ + VGYGLTES+ ++ P
Sbjct: 378 KTVYALLKKTIGIENGTFFPTAGAAVSNEVCEFVHSVGINMVVGYGLTESTATVSCFLPR 437
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
VLGSVG + E+KI E NEVL +RG + GY+K AT +A+D D
Sbjct: 438 NFVLGSVGEMMPDLEVKI--GENNEVL---------LRGKTITPGYYKKAEATAEAIDAD 486
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GW +TGD G R G L L R KD S G+ + P LE + I
Sbjct: 487 GWFHTGDAG-----------RLEGNTLYLTDRIKDLFKTSNGKYICPQALETQFIIDRYI 535
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 437
QI VI +++ A+IVP V AK I + +L + I L+ R T +
Sbjct: 536 DQIAVIADERKFVSALIVPVYGLVKGYAKEKGIEYQSMKDLLEHPKIQALF-RARIDTLQ 594
Query: 438 CSF----QIGPIHVVDEPFTV 454
F Q+ ++ EPF++
Sbjct: 595 QQFAHYEQVKRFTLLPEPFSM 615
>gi|383110916|ref|ZP_09931734.1| hypothetical protein BSGG_2021 [Bacteroides sp. D2]
gi|313694486|gb|EFS31321.1| hypothetical protein BSGG_2021 [Bacteroides sp. D2]
Length = 604
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 131/443 (29%), Positives = 207/443 (46%), Gaps = 54/443 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHV 78
E DD+A +YTSGTTG PKGVML H L Q + D + + D ++ LP HV
Sbjct: 175 ERASYDDLANILYTSGTTGEPKGVMLHHSCYLEQFHTHDDRLTTMSDKDVSMNFLPLTHV 234
Query: 79 YERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
+E+A Y +G+++ + +++ ++ +P M SVP +E +Y+G+Q++I ++
Sbjct: 235 FEKAWCYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKINETTG 294
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
++ + IR+ RI+ R K P + L +
Sbjct: 295 LKKALMLDAIRVG-------RIH-NLDYLRLGKTPPVMNQL---------------KYKF 331
Query: 198 AEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
EK +Y ++ IGI + G ++P I+ F ++G+ + VGYGLTES+ ++
Sbjct: 332 YEKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVGYGLTESTATVSCTL 391
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
P +GSVG + E+KI E NE+L +RG + +GY+K AT A++
Sbjct: 392 PVGYDIGSVGVVLPGLEVKI--GEDNEIL---------LRGKTITKGYYKKAEATAAAIE 440
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
DGW +TGD G+ G L L R KD S G+ V P LE +
Sbjct: 441 PDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNGKYVAPQALETKLVIDR 489
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT 435
I QI +I ++ A+IVP V AK I + D +EL + I L+ R T
Sbjct: 490 YIDQIAIIADQRKFVSALIVPVYGFVKEYAKEKGIEYKDMTELLQHPKIVGLF-RARIDT 548
Query: 436 SKCSF----QIGPIHVVDEPFTV 454
+ F QI ++ EPF++
Sbjct: 549 LQQQFAHYEQIKRFTLLPEPFSM 571
>gi|222111040|ref|YP_002553304.1| AMP-dependent synthetase and ligase [Acidovorax ebreus TPSY]
gi|221730484|gb|ACM33304.1| AMP-dependent synthetase and ligase [Acidovorax ebreus TPSY]
Length = 609
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 130/436 (29%), Positives = 208/436 (47%), Gaps = 46/436 (10%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+D+A VYTSGTTG PKGVML+H N++ ++++ + + D FLS LP H +ER G
Sbjct: 185 EDLAAIVYTSGTTGKPKGVMLSHANVVADVKAVLERIAPTPQDVFLSFLPLSHTFERTGG 244
Query: 85 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y++ + G ++Y +V L +DL+ +P ++SVP +YE +++ + + + S
Sbjct: 245 YYLPMASGSCVVYARSVAQLAEDLKNVRPTVLVSVPRIYERVHAKLIETLSPSP------ 298
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
+++ A ++ FC + P A W R A+ WP L LV
Sbjct: 299 ----LKMQLFQAAQAVGWKRFCAAQRLPAPQDDGA---GGWMR---ALPWP---LLRALV 345
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
K + + G + VSGG L I + +G+++ GYG+TE++PV++ N
Sbjct: 346 AKPLLAQFGGRVRVAVSGGAPLSPTIAHCFLGLGLQLVQGYGMTETTPVVSVNTLEDNDP 405
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
+VG + E++I G ++VRG VM+GY+K P T + + DGWL
Sbjct: 406 STVGRALPGVEVRI-----------GENRELQVRGPIVMKGYWKRPEDTARTVSADGWLG 454
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD I GR R + GR K+ IV STGE V P +LE A +L Q
Sbjct: 455 TGDQAEIV----DGRIR-------ILGRIKEIIVTSTGEKVPPADLELAITADALFEQAF 503
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQ 441
V+G+ + + V EE A +L + D + L+ + K +
Sbjct: 504 VVGEQRPFIACVAVVHAEEWRQLAGQLGLDANDPASLAHPSAQRAALARIEKLAAGFPRY 563
Query: 442 IGP--IHVVDEPFTVN 455
P +H+V EP+T+
Sbjct: 564 AVPRAVHLVREPWTIE 579
>gi|299147218|ref|ZP_07040283.1| putative long-chain-fatty-acid--CoA ligase [Bacteroides sp. 3_1_23]
gi|298514496|gb|EFI38380.1| putative long-chain-fatty-acid--CoA ligase [Bacteroides sp. 3_1_23]
Length = 604
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 131/443 (29%), Positives = 207/443 (46%), Gaps = 54/443 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHV 78
E DD+A +YTSGTTG PKGVML H L Q + D + + D ++ LP HV
Sbjct: 175 ERASYDDLANILYTSGTTGEPKGVMLHHSCYLEQFHTHDDRLTTMSDKDVSMNFLPLTHV 234
Query: 79 YERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
+E+A Y +G+++ + +++ ++ +P M SVP +E +Y+G+Q++I ++
Sbjct: 235 FEKAWCYLCIHKGVQVCINLRPADIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKINETTG 294
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
++ + IR+ RI+ R K P + L +
Sbjct: 295 LKKALMLDAIRVG-------RIH-NLDYLRLGKTPPVMNQL---------------KYKF 331
Query: 198 AEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
EK +Y ++ IGI + G ++P I+ F ++G+ + VGYGLTES+ ++
Sbjct: 332 YEKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVGYGLTESTATVSCTL 391
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
P +GSVG + E+KI E NE+L +RG + +GY+K AT A++
Sbjct: 392 PVGYDIGSVGVVLPGIEVKI--GEDNEIL---------LRGKTITKGYYKKAEATAAAIE 440
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
DGW +TGD G+ G L L R KD S G+ V P LE +
Sbjct: 441 PDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNGKYVAPQALETKLVIDR 489
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT 435
I QI +I ++ A+IVP V AK I + D +EL + I L+ R T
Sbjct: 490 YIDQIAIIADQRKFVSALIVPVYGFVKEYAKEKGIEYKDMTELLQHPKIVGLF-RARIDT 548
Query: 436 SKCSF----QIGPIHVVDEPFTV 454
+ F QI ++ EPF++
Sbjct: 549 LQQQFAHYEQIKRFTLLPEPFSM 571
>gi|448330677|ref|ZP_21519956.1| AMP-dependent synthetase and ligase [Natrinema versiforme JCM
10478]
gi|445611181|gb|ELY64941.1| AMP-dependent synthetase and ligase [Natrinema versiforme JCM
10478]
Length = 652
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/407 (30%), Positives = 197/407 (48%), Gaps = 60/407 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNL---LHQIRSLYDIVPAENGDK--------FLSML 73
DD+A+ +YTSGTTG PKGV L+H+N ++ IR + P ++ D +S L
Sbjct: 206 DDLASLIYTSGTTGQPKGVQLSHRNFRSNVNGIRKRFAPRPDKDDDVPVLDEESVAMSYL 265
Query: 74 PPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P HV+ER G+F+ F+ G + Y + L++D +P SVP VYE +Y I+++
Sbjct: 266 PLAHVFERTAGHFVLFASGACVAYAESPDTLQEDFSLVEPTTATSVPRVYEKIYDSIREE 325
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
S+ + R+ A +++ A IL
Sbjct: 326 ASGSAVSERIFEWATD-----------------------------VGVEYQLADSPGPIL 356
Query: 192 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
+A+KLV+ ++ A+G +SGGGSL + Y A+G+ + GYGLTE+SPV
Sbjct: 357 SAKQAVADKLVFSSVREALGGEIDLLISGGGSLSPELCRLYHAMGLPIFEGYGLTETSPV 416
Query: 251 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA---GSKGIVKVRGSQVMQGYFKNP 307
++ +G++G P+ + ++K+ + ++ A G G + V G V +GY+ P
Sbjct: 417 VSTNPQDAVKVGTIGPPLANVDVKVDETVADQEAFADDPGEVGELLVNGPNVTEGYWNRP 476
Query: 308 SATKQALD--EDG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 363
AT+ A EDG W TGDI + P G L R K IVLSTG+NV
Sbjct: 477 GATRGAFTEAEDGTQWFRTGDIIHLRPD----------GYLEFRDRLKQIIVLSTGKNVA 526
Query: 364 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 410
P LE+A S ++ Q +V+G ++ GA++VP+ V A I
Sbjct: 527 PGPLEDAFAASEIVEQAMVVGDGEKFIGALLVPNTNHVRTWADEEGI 573
>gi|260775231|ref|ZP_05884129.1| long-chain-fatty-acid--CoA ligase [Vibrio coralliilyticus ATCC
BAA-450]
gi|260608932|gb|EEX35094.1| long-chain-fatty-acid--CoA ligase [Vibrio coralliilyticus ATCC
BAA-450]
Length = 602
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 131/430 (30%), Positives = 202/430 (46%), Gaps = 55/430 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+D+ T +YTSGTTG PKGVML + N+ Q+ + D L LP HV+ERA
Sbjct: 178 EDLLTLIYTSGTTGQPKGVMLDYGNVAAQLEGHDARLSLSQDDVSLCFLPLSHVFERAWT 237
Query: 85 YFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
+++ RG Y +++ L QP M +VP YE ++S I +++ + R+V+
Sbjct: 238 FYVLYRGATNCYLQDTMQVREALSEVQPTVMCAVPRFYEKIFSAIHEKVSKAPMIRKVLF 297
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
+ + A + EG +QPS IL H LA+KLV
Sbjct: 298 TWAVNMGAKMAACDQ--EG-------RQPSL---------------ILKKSHQLADKLVL 333
Query: 204 KKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K+++ +G + GG L I F+ A+G+ V++GYG+TE++ ++
Sbjct: 334 SKLRALLGGRINFMPCGGAKLDETIGRFFHAMGINVKLGYGMTETTATVSCWSDNSFNPD 393
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G + ++KI E NE+L VRG VM+GY+K P T + DE G+L T
Sbjct: 394 SIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETAKTFDEHGFLKT 442
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD G I G L + R K+ + S G+ + P +E A + I QI V
Sbjct: 443 GDAGHIDED----------GNLFITDRIKELMKTSGGKYIAPQMIEGAIGKDHFIEQIAV 492
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 434
I ++ A+IVP + + AK L+I + D EL K EK ++ L EL K+
Sbjct: 493 IADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQVVEMLEKRVNDLQQELAKF 552
Query: 435 TSKCSFQIGP 444
F++ P
Sbjct: 553 EQVKKFKLLP 562
>gi|261253922|ref|ZP_05946495.1| long-chain-fatty-acid--CoA ligase [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|417954558|ref|ZP_12597591.1| putative long-chain-fatty-acid-CoA ligase [Vibrio orientalis CIP
102891 = ATCC 33934]
gi|260937313|gb|EEX93302.1| long-chain-fatty-acid--CoA ligase [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|342815104|gb|EGU50031.1| putative long-chain-fatty-acid-CoA ligase [Vibrio orientalis CIP
102891 = ATCC 33934]
Length = 602
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 200/430 (46%), Gaps = 55/430 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+ T +YTSGTTG PKGVML + N+ Q+ + D L LP HV+ERA
Sbjct: 178 DDLLTLIYTSGTTGQPKGVMLDYANIAAQLEGHDQRLSLSESDVSLCFLPLSHVFERAWT 237
Query: 85 YFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
+++ +G Y ++D L +P M +VP YE ++S I +++ + R+V+
Sbjct: 238 FYVLYKGATNCYLQDTMQVRDALSEVRPTVMCAVPRFYEKIFSAIHEKVAKAPFIRKVL- 296
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
F + C +K PS + L + LA+KLV
Sbjct: 297 -------FTWAVNMGAKMAVCHQEGRK-PSLM---------------LKKSYALADKLVL 333
Query: 204 KKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++ C
Sbjct: 334 SKLRALLGGKINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDKCFNPD 393
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G + ++KI E NE+L VRG VM+GY+K P T + DE G+L T
Sbjct: 394 SIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETAKTFDEHGFLKT 442
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD G I + G + + R K+ + S G+ + P +E + I QI V
Sbjct: 443 GDAGHIDEN----------GNVFITDRIKELMKTSNGKYIAPQMVEGTIGKDHFIEQIAV 492
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 434
I ++ A+IVP + + AK L+I + D EL K EK ++ L EL K+
Sbjct: 493 IADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELVKHHQIVEMLEKRVNDLQKELAKF 552
Query: 435 TSKCSFQIGP 444
F++ P
Sbjct: 553 EQVKKFKLLP 562
>gi|262166521|ref|ZP_06034258.1| long-chain-fatty-acid--CoA ligase [Vibrio mimicus VM223]
gi|262026237|gb|EEY44905.1| long-chain-fatty-acid--CoA ligase [Vibrio mimicus VM223]
Length = 601
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 134/435 (30%), Positives = 206/435 (47%), Gaps = 55/435 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+
Sbjct: 173 EQADFDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQDDVSLCFLPLSHVF 232
Query: 80 ERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ERA ++ +G Y V +++D L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYKGATNCYLHDVSHVRDALGEVRPTVMCAVPRFYEKIFSAIHEKVAKAPFI 292
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
R+V+ F + C + Q+QPS+L L H LA
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQRQPSWL---------------LKQNHQLA 328
Query: 199 EKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ I+
Sbjct: 329 DKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATISCWDDY 388
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
S+G + ++KI E NE+L VRG VM+GY+K T ++ DE
Sbjct: 389 SFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLEKETAESFDEH 437
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
G+L TGD G I + G L + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 429
QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNELQK 547
Query: 430 ELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFKLLP 562
>gi|238786709|ref|ZP_04630510.1| long-chain-fatty-acid--CoA ligase [Yersinia frederiksenii ATCC
33641]
gi|238725077|gb|EEQ16716.1| long-chain-fatty-acid--CoA ligase [Yersinia frederiksenii ATCC
33641]
Length = 599
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 201/415 (48%), Gaps = 47/415 (11%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ E+ +D+ T +YTSGTTG PKGVML ++N+ Q+ + D LS LP H
Sbjct: 173 RIESCDLNDLFTLIYTSGTTGEPKGVMLDYRNMAAQLYLHDQRLTLTTEDVSLSFLPLSH 232
Query: 78 VYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ERA +++ G + +Y + + ++ +Q +P M +VP YE ++S I ++ +
Sbjct: 233 VFERAWSFYVMHTGAQNVYISNTDWVRAAMQATKPTVMCAVPRFYEKVFSAIHDKVALAK 292
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
RR++ R I S F+ + G L+ +Q ++
Sbjct: 293 WHRRLLFRWAIGCS--ERQFQSLQNGQTLSPLSRQ----------------------MYK 328
Query: 197 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LA++LV K++ +G + + G L +I LF+++IG+ ++ GYG+TE+ ++
Sbjct: 329 LADRLVLSKLRGILGGKVRFLPAAGARLDDNIILFFQSIGINIKYGYGMTETCATVSCWE 388
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
GS+G P+ E+++ G++ ++VRG VM+GYF P T ++
Sbjct: 389 EKDFCFGSIGKPLPGIEVRL-----------GAENEIQVRGQIVMRGYFNKPQETAESFT 437
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
EDGWL TGD G + G L + R KD + S G+ + P +E +
Sbjct: 438 EDGWLKTGDAGALDTQ----------GNLFITERLKDLMKTSGGKYIAPQMIEGTLGQDR 487
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
I QI +I ++ A+IVP E + A+ +++ + D EL + I L+ +
Sbjct: 488 FIEQIAIIADTRKFVSALIVPCFESLEEYARSINLKYHDRLELLRHSHIVALFEQ 542
>gi|68248553|ref|YP_247665.1| long chain fatty acid CoA ligase [Haemophilus influenzae 86-028NP]
gi|68056752|gb|AAX87005.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
86-028NP]
Length = 607
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/407 (30%), Positives = 192/407 (47%), Gaps = 47/407 (11%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 186 DLFTIIYTSGTTGEPKGVMLDYANLAHQLETHDLSLNVTDQDISLSFLPFSHIFERAWAA 245
Query: 86 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 246 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 305
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
I + + F L N K +L L LA+KLV
Sbjct: 306 WTISVGQKH---------FDLRANNKAIPFL---------------LKKQFALADKLVLS 341
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 342 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 401
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
+G + E+KI E NE+L VRG VM+GY+K P T QA +DG+L TG
Sbjct: 402 IGTLMPKAEVKI--GENNEIL---------VRGKMVMKGYYKKPEETAQAFTKDGFLKTG 450
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 451 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 500
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
++ A+IVP + + AK+++I + D EL K I ++ +
Sbjct: 501 ADAKKYVSALIVPCFDSLEEYAKQINIKYHDRLELLKNSDILKMFEQ 547
>gi|23464868|ref|NP_695471.1| long-chain-fatty acid CoA ligase [Bifidobacterium longum NCC2705]
gi|23325456|gb|AAN24107.1| probable long-chain-fatty acid CoA ligase [Bifidobacterium longum
NCC2705]
Length = 607
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 130/460 (28%), Positives = 215/460 (46%), Gaps = 69/460 (15%)
Query: 16 HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL----LHQIRSLYDIVPAENGDKFLS 71
H + T+ +DD+AT VYTSG+TGNPKG LTHKN + ++L+++V ++ + L
Sbjct: 173 HERVATVRTDDLATIVYTSGSTGNPKGAELTHKNFVSITISASQALHEVV-LDDHPRLLL 231
Query: 72 MLPPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQ 129
LP H + R Y + G+ + L DL+ ++P Y++ VP V+E +Y+
Sbjct: 232 FLPLAHCFARFIQYASIASDDGVVGYLPDTKTLLPDLRSFEPTYLLGVPRVFEKVYNAAS 291
Query: 130 KQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICA 189
+ R V A + ++ ++ E ++ Y
Sbjct: 292 HKAGAGWKGRLFVKAA--EAARVWSRKEQAGEQHTFAEIAERAKY--------------- 334
Query: 190 ILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGYGLTES 247
E LVY+ ++ A+G V+ GG+ P+ +DL FY IG+ + GYG+TE+
Sbjct: 335 ---------ETLVYRTVRGALGPKIKYVACGGA-PLSLDLAHFYNGIGLPMIQGYGMTET 384
Query: 248 SPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNP 307
+ AA R T NV+G+VG P + I+I D +G ++V+G V +GY P
Sbjct: 385 AAPFAATRVTDNVIGTVGQPAPGSSIRISD-----------EGELQVKGPNVFRGYHNLP 433
Query: 308 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 367
T +A DGWL TGD+ I G +V+ GR KD I+ + G+NV P+ L
Sbjct: 434 EKTAEAFTADGWLRTGDLAEIDDE----------GHIVITGRIKDIIITAGGKNVSPIPL 483
Query: 368 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL--MAAKRLSIVHADASELSKEKTIS 425
EE + ++ VV+G + GA++ D E + + A LS + + + T +
Sbjct: 484 EEEIAKCPIVEHCVVVGDQRPFIGALVTLDPESLALWLPAHGLST----ETPVDRLATNA 539
Query: 426 LLYGELRKWTSKCSFQIG------PIHVVDEPFTVNFLCL 459
+ E++++ K + + V+D FT CL
Sbjct: 540 AVREEIQQYVDKANATVSRAESVRKFAVLDTQFTQENKCL 579
>gi|365540244|ref|ZP_09365419.1| Long-chain-fatty-acid--CoA ligase [Vibrio ordalii ATCC 33509]
Length = 602
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 130/437 (29%), Positives = 206/437 (47%), Gaps = 55/437 (12%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ E DD+ T +YTSGTTG PKGVML ++N+ Q+ + + + D L LP H
Sbjct: 171 RLEQANIDDLLTLIYTSGTTGQPKGVMLDYRNIGAQLEGHDERLNITSDDVSLCFLPLSH 230
Query: 78 VYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ERA ++I G Y ++D L +P M +VP YE ++S I +++ +
Sbjct: 231 VFERAWTFYILYCGATNCYLQDTMQVRDALSDLKPTVMCAVPRFYEKIFSAIHEKVSKAP 290
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
R+V+ F + C + +QPS++ L +
Sbjct: 291 LHRKVL--------FTWAVNMGAKMALC-HQETRQPSFM---------------LKKSYA 326
Query: 197 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LA+K+V K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 327 LADKIVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWD 386
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
C S+G + ++KI D NE+L VRG VM+GY+K T A D
Sbjct: 387 DRCFNPDSIGMSMPGAQVKIGD--NNEIL---------VRGPMVMRGYYKMAEETALAFD 435
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
E G+L TGD G I G + + R K+ + S G+ + P +E A +
Sbjct: 436 EQGFLKTGDAGHIDEQ----------GNVFITDRIKELMKTSGGKYIAPQVIEGAIGKDH 485
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLL 427
I QI VI ++ A+IVP + + + AK L+I + D EL K EK ++ L
Sbjct: 486 FIEQIAVIADTRKFVSALIVPCYDSLEVYAKELNIKYHDRLELIKNNQVVEMLEKRVNDL 545
Query: 428 YGELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 546 QKELAKFEQVKKFKLLP 562
>gi|424861960|ref|ZP_18285906.1| long-chain fatty-acid-CoA ligase [Rhodococcus opacus PD630]
gi|356660432|gb|EHI40796.1| long-chain fatty-acid-CoA ligase [Rhodococcus opacus PD630]
Length = 599
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 190/384 (49%), Gaps = 56/384 (14%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFLSMLPPWHV 78
+ D+A+ VYTSGTTG PKG +LTH+N L ++R+L D+ A G++ L+ LP HV
Sbjct: 176 ASDLASLVYTSGTTGRPKGCILTHRNFLSEVRALLAAPIGDV--ARPGNRVLTFLPLAHV 233
Query: 79 YERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
RA +F G + ++ + + +R++P+ ++ VP V+E + G ++ ++
Sbjct: 234 LARAVSLAMFEAGATQAHWSDFGTVTGEFERFRPNTILGVPRVFEKVRDGAARKAASAGG 293
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
++ + + AY+ ++ PS + L
Sbjct: 294 LQKRIFDFAEATAVAYSE----------AQDAGGPSLRLRF---------------ERAL 328
Query: 198 AEKLVYKKIQSAIGISKA-GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 256
A+KLVY K+++A+G +SGGG+L + F+ +GV V GYGLTES+ P
Sbjct: 329 ADKLVYAKLRAALGGDCWWAISGGGALMPRLGHFFRGMGVPVYEGYGLTESTAAHCVNVP 388
Query: 257 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 316
+G+VG P+ ++I + G +++RG V GY++N AT++ LD
Sbjct: 389 GVQKIGTVGQPLGGNGVRIAE-----------DGEIELRGGVVFGGYWRNEHATREVLD- 436
Query: 317 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 376
DGW TGD+G + G L + GR KD +V + G+NV P LE+ +L
Sbjct: 437 DGWFRTGDLGDLDDE----------GYLTITGRKKDLLVTAGGKNVSPGPLEDRLRSHTL 486
Query: 377 IRQIVVIGQDQRRPGAIIVPDKEE 400
+ Q VV+G + GA++ D +E
Sbjct: 487 VSQAVVVGDGRPFVGALLTVDPQE 510
>gi|419839901|ref|ZP_14363302.1| AMP-binding enzyme [Haemophilus haemolyticus HK386]
gi|386909003|gb|EIJ73687.1| AMP-binding enzyme [Haemophilus haemolyticus HK386]
Length = 602
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 191/407 (46%), Gaps = 47/407 (11%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 178 DLFTIIYTSGTTGEPKGVMLDYANLAHQLEAHDLSLNVTDQDISLSFLPFSHIFERAWAA 237
Query: 86 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 238 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 297
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
I + + F L N K +L L LA+KLV
Sbjct: 298 WAISVGQKH---------FDLRANNKTVPFL---------------LKKQFALADKLVLS 333
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 334 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 393
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
+G + E+KI E NE+L VR VM+GY+K P T QA EDG+L TG
Sbjct: 394 IGTLMPKAEVKI--GENNEIL---------VRSGMVMKGYYKKPEETAQAFTEDGFLKTG 442
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 443 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 492
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
++ A+IVP + + AK+L+I + D EL K I ++ +
Sbjct: 493 ADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSEILKMFEQ 539
>gi|295086341|emb|CBK67864.1| Long-chain acyl-CoA synthetases (AMP-forming) [Bacteroides
xylanisolvens XB1A]
Length = 604
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 131/443 (29%), Positives = 206/443 (46%), Gaps = 54/443 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHV 78
E DD+A +YTSGTTG PKGVML H L Q + D + + D ++ LP HV
Sbjct: 175 ERASYDDLANILYTSGTTGEPKGVMLHHSCYLEQFHTHDDRLTTMSDKDVSMNFLPLTHV 234
Query: 79 YERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
+E+A Y +G+++ + +++ ++ +P M SVP +E +Y+G+Q++I ++
Sbjct: 235 FEKAWCYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKINETAG 294
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
++ + IR+ RI+ R K P + L +
Sbjct: 295 LKKALMLDAIRVG-------RIH-NLDYLRLGKTPPVMNQL---------------KYKF 331
Query: 198 AEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
EK +Y ++ IGI + G ++P I+ F ++G+ + VGYGLTES+ ++
Sbjct: 332 YEKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVGYGLTESTATVSCTL 391
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
P +GSVG + E+KI E NE+L +RG + +GY+K AT A++
Sbjct: 392 PVGYDIGSVGVVLPGIEVKI--GEDNEIL---------LRGKTITKGYYKKAEATAAAIE 440
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
DGW +TGD G+ G L L R KD S G+ V P LE +
Sbjct: 441 PDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNGKYVAPQALETKLVIDR 489
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT 435
I QI +I ++ A+IVP V A+ I + D EL K I L+ R T
Sbjct: 490 YIDQIAIIADQRKFVSALIVPVYGFVKEYAEEKGIKYKDMEELLKHPKIVGLF-RARIDT 548
Query: 436 SKCSF----QIGPIHVVDEPFTV 454
+ F QI ++ EPF++
Sbjct: 549 LQQQFAHYEQIKRFTLLPEPFSM 571
>gi|298481594|ref|ZP_06999785.1| long-chain-fatty-acid-CoA ligase [Bacteroides sp. D22]
gi|423214977|ref|ZP_17201505.1| hypothetical protein HMPREF1074_03037 [Bacteroides xylanisolvens
CL03T12C04]
gi|298272135|gb|EFI13705.1| long-chain-fatty-acid-CoA ligase [Bacteroides sp. D22]
gi|392692240|gb|EIY85478.1| hypothetical protein HMPREF1074_03037 [Bacteroides xylanisolvens
CL03T12C04]
Length = 604
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 131/443 (29%), Positives = 206/443 (46%), Gaps = 54/443 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHV 78
E DD+A +YTSGTTG PKGVML H L Q + D + + D ++ LP HV
Sbjct: 175 ERASYDDLANILYTSGTTGEPKGVMLHHSCYLEQFHTHDDRLTTMSDKDVSMNFLPLTHV 234
Query: 79 YERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
+E+A Y +G+++ + +++ ++ +P M SVP +E +Y+G+Q++I ++
Sbjct: 235 FEKAWCYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKINETTG 294
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
++ + IR+ RI+ R K P + L +
Sbjct: 295 LKKALMLDAIRVG-------RIH-NLDYLRLGKTPPVMNQL---------------KYKF 331
Query: 198 AEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
EK +Y ++ IGI + G ++P I+ F ++G+ + VGYGLTES+ ++
Sbjct: 332 YEKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVGYGLTESTATVSCTL 391
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
P +GSVG + E+KI E NE+L +RG + +GY+K AT A++
Sbjct: 392 PVGYDIGSVGVVLPGIEVKI--GEDNEIL---------LRGKTITKGYYKKAEATAAAIE 440
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
DGW +TGD G+ G L L R KD S G+ V P LE +
Sbjct: 441 PDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNGKYVAPQALETKLVIDR 489
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT 435
I QI +I ++ A+IVP V A+ I + D EL K I L+ R T
Sbjct: 490 YIDQIAIIADQRKFVSALIVPVYGFVKEYAEEKGIKYKDMEELLKHPKIVGLF-RARIDT 548
Query: 436 SKCSF----QIGPIHVVDEPFTV 454
+ F QI ++ EPF++
Sbjct: 549 LQQQFAHYEQIKRFTLLPEPFSM 571
>gi|386265628|ref|YP_005829120.1| long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoA synthetase)
(LACS) [Haemophilus influenzae R2846]
gi|309972864|gb|ADO96065.1| Probable long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoA
synthetase) (LACS) [Haemophilus influenzae R2846]
Length = 607
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/407 (30%), Positives = 192/407 (47%), Gaps = 47/407 (11%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 186 DLFTIIYTSGTTGEPKGVMLDYANLAHQLETHDLSLNVTDQDISLSFLPFSHIFERAWAA 245
Query: 86 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 246 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 305
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
I + + F L N K +L L LA+KLV
Sbjct: 306 WTISVGQKH---------FDLRANNKAIPFL---------------LKKQFALADKLVLS 341
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 342 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 401
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
+G + E+KI E NE+L VRG VM+GY+K P T QA +DG+L TG
Sbjct: 402 IGTLMPKAEVKI--GENNEIL---------VRGKMVMKGYYKKPEETAQAFTKDGFLKTG 450
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 451 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 500
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
++ A+IVP + + AK+++I + D EL K I ++ +
Sbjct: 501 ADAKKYVSALIVPCFDSLEEYAKQINIKYHDRLELLKNSDILKMFEQ 547
>gi|365837168|ref|ZP_09378548.1| AMP-binding enzyme [Hafnia alvei ATCC 51873]
gi|364562746|gb|EHM40580.1| AMP-binding enzyme [Hafnia alvei ATCC 51873]
Length = 600
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 210/443 (47%), Gaps = 52/443 (11%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ E D+ T +YTSGTTG PKGVML + N+ Q+R + + D L LP H
Sbjct: 173 RIEQADMSDLFTLIYTSGTTGEPKGVMLNYTNMGAQLRLHDERLTVTADDVSLCFLPLSH 232
Query: 78 VYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ERA +++ G + +Y + N +++ +Q +P M +VP YE ++S I +++ +
Sbjct: 233 VFERAWSFYVMHSGAQNVYLSDTNQVREAMQSVKPTVMCAVPRFYEKIFSAIHEKVAQAK 292
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
+R + + I + KR F R +P+ +L +H
Sbjct: 293 WHKRAMFKCAI-----WVGEKR----FLTERAGCKPN---------------VVLSAMHK 328
Query: 197 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LA+KLV K++ +G + + G L ++ LF++A+G ++ GYG+TE+ ++
Sbjct: 329 LADKLVLSKLRGILGGRVRFLPAAGAKLDDNVILFFQALGANIKYGYGMTETCATVSCWE 388
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
GS+G P+ E++I G + ++VRG VM GY+ P T
Sbjct: 389 ENDFRFGSIGKPLPDVEVRI-----------GQENEIQVRGPIVMCGYYNKPLETAATFT 437
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
EDGWL TGD G + + G L + R KD + S G+ + P +E +
Sbjct: 438 EDGWLKTGDAGALDEN----------GNLFITERLKDLMKTSNGKYIAPQMVEGTLAQDR 487
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYG----EL 431
I Q+ VI ++ A+IVP E + AK +++ + D +L + I ++ E+
Sbjct: 488 FIEQVAVIADARKFVSALIVPCFESLEEYAKSINLKYHDRLDLLRHSHIVEMFDQRLREM 547
Query: 432 RKWTSKCSFQIGPIHVVDEPFTV 454
+K +K Q+ ++ E F++
Sbjct: 548 QKGLAKFE-QVKRFTLLPEAFSM 569
>gi|422923777|ref|ZP_16956920.1| AMP-binding enzyme family protein [Vibrio cholerae BJG-01]
gi|341643515|gb|EGS67800.1| AMP-binding enzyme family protein [Vibrio cholerae BJG-01]
Length = 601
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 130/435 (29%), Positives = 206/435 (47%), Gaps = 55/435 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+
Sbjct: 173 EQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVF 232
Query: 80 ERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ERA ++ +G Y V ++++ L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPFV 292
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
R+V+ F + C + Q+QPS++ L H A
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------------LKQSHQFA 328
Query: 199 EKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 329 DKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDH 388
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
C S+G + ++KI E NE+L VRG VM+GY+K T ++ DE
Sbjct: 389 CFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLDKETAESFDEH 437
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
G+L TGD G I + G + + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLKTGDAGHIDEN----------GNVFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 429
QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNDLQK 547
Query: 430 ELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFRLLP 562
>gi|407452010|ref|YP_006723735.1| long-chain acyl-CoA synthetase [Riemerella anatipestifer RA-CH-1]
gi|403312994|gb|AFR35835.1| Long-chain acyl-CoA synthetases (AMP-forming) [Riemerella
anatipestifer RA-CH-1]
Length = 585
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 200/410 (48%), Gaps = 50/410 (12%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAEN--GDKFLSMLPPWHVYERAC 83
D++T +YTSGT+G PKGVMLTH NL+ ++ D +N + L+ LP H++ER+
Sbjct: 167 DLSTILYTSGTSGTPKGVMLTHGNLIDCFQAHTDFFKFKNFENETSLAFLPLSHIFERSW 226
Query: 84 GYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
F S+G ++ + + + L+ +P M +VP Y+ +Y +++ + SS+ ++ +
Sbjct: 227 TLFCLSKGAKVSFLENTKLIAHALEEVKPSMMCAVPRFYQKIYGALREMVEKSSSTKKKI 286
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
+ I + ++ R K + +AL D +A KLV
Sbjct: 287 FDWALNIGTQCSEYR---------RKGKSVPFGLALKD---------------KIASKLV 322
Query: 203 YKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
+ KI+ +G + + GG ++ I F++A+G+ + VGYGLTE++ +
Sbjct: 323 FNKIKQKLGGNLWFMPCGGAAISPEILKFFDAMGIHITVGYGLTETTATLTCFPAYNYEY 382
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
+ G PI T+IKI E NE+L V+GS VM+GY+ P T +A EDGW
Sbjct: 383 ETAGIPIGDTQIKI--GEHNEIL---------VKGSGVMKGYYNLPEETAKAFTEDGWFR 431
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD G I G L + R KD + S G+ + P +E S+ I+Q +
Sbjct: 432 TGDAGVIE-----------NGTLKITDRIKDLMKTSNGKYITPQVIENILTNSNYIQQAM 480
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGEL 431
V+ + + A+IVP+ E + K + + D +E+ + I+ Y ++
Sbjct: 481 VVAEGKPFVTAVIVPNFEALKEKVKAMKLSMTDWNEIVSSEKITQFYHDI 530
>gi|374852348|dbj|BAL55283.1| hypothetical conserved protein [uncultured Bacteroidetes bacterium]
Length = 601
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 132/428 (30%), Positives = 201/428 (46%), Gaps = 51/428 (11%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI---RSLYDIVPAENGDKF--LSMLP 74
E + +D AT++YTSGTTG PKGV+LTH N++ + RSL I + G + LS LP
Sbjct: 163 EAVQPEDWATFLYTSGTTGTPKGVILTHHNIVSNVLTVRSLNLIPRSPEGQRLRALSFLP 222
Query: 75 PWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 133
H +ER Y + GI + Y ++ + +L+ +PH SVP + E +Y I
Sbjct: 223 LNHSFERMVFYTYLAMGIGVYYAESLDTIAQNLREVKPHVFTSVPRLLEKVYERIMATAQ 282
Query: 134 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
T + +R + + + Y G+ L
Sbjct: 283 TLTGLKRTLFFWAMDLVKDYDPEAPYPLGYRLQLG------------------------- 317
Query: 194 LHLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
LA LV+KK + A+G + + V+G +LP H+ + G+ + GYGLTE+SPVI+
Sbjct: 318 ---LARTLVFKKWKEALGGNVSLIVTGAAALPQHLARIFWGAGIPIMEGYGLTETSPVIS 374
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
+ LGSVG PI E++I E E G IV VRG VM GY+KNP AT +
Sbjct: 375 VNTFDAHRLGSVGRPIPGVEVRI---EPLEGYTEGEGEIV-VRGPNVMVGYYKNPEATAE 430
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
L E GW TGD+G + G L + R K+ + G+ + P +E A
Sbjct: 431 VLKE-GWFYTGDVGKLDKD----------GFLYITDRKKELFKTAGGKYIAPQPIESALK 479
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL-SKEKTISLLYGEL 431
S I Q +V+G+ ++ P A+IVP + AK + + EL + + L+ E+
Sbjct: 480 SSLFIEQAMVVGEYRKFPAALIVPSFPNLEKWAKEQGLSYTSREELVHHPRVVELIQAEV 539
Query: 432 RKWTSKCS 439
+ ++ S
Sbjct: 540 DRINAQFS 547
>gi|429888249|ref|ZP_19369739.1| Long-chain-fatty-acid--CoA ligase [Vibrio cholerae PS15]
gi|429224692|gb|EKY31030.1| Long-chain-fatty-acid--CoA ligase [Vibrio cholerae PS15]
Length = 601
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 130/435 (29%), Positives = 206/435 (47%), Gaps = 55/435 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+
Sbjct: 173 EQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVF 232
Query: 80 ERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ERA ++ +G Y V ++++ L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLV 292
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
R+V+ F + C + Q+QPS++ L H A
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------------LKQSHQFA 328
Query: 199 EKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 329 DKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDH 388
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
C S+G + ++KI E NE+L VRG VM+GY+K T ++ DE
Sbjct: 389 CFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLDKETAESFDEH 437
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
G+L TGD G I + G + + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLKTGDAGHIDEN----------GNVFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 429
QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNDLQK 547
Query: 430 ELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFRLLP 562
>gi|365121016|ref|ZP_09338186.1| hypothetical protein HMPREF1033_01532 [Tannerella sp.
6_1_58FAA_CT1]
gi|363646486|gb|EHL85732.1| hypothetical protein HMPREF1033_01532 [Tannerella sp.
6_1_58FAA_CT1]
Length = 603
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 196/427 (45%), Gaps = 60/427 (14%)
Query: 16 HYKYE----TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR-SLYDIVPAENGDKFL 70
HY E + +D+ + +YTSGTTG PKGVMLT+ N +R + + D L
Sbjct: 169 HYTLEQRMLSASDEDLVSIIYTSGTTGEPKGVMLTNSNFNEAMRIHIQRLKMVSEKDISL 228
Query: 71 SMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDD-----LQRYQPHYMISVPLVYETLY 125
LP H++ERA YF +GI + V N K D ++ +P M SVP +E +Y
Sbjct: 229 CFLPLTHIFERAWTYFCLVKGIRV----VINQKPDEIQSIIKEVRPTIMCSVPRFWEKVY 284
Query: 126 SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 185
+ +Q++I TS +R++ + T KR R +K+ + + LW
Sbjct: 285 TAVQEKISTSKGIQRIMMMKAVE-----TGRKR---NIDFLRLEKKVPFFLECRYRLW-- 334
Query: 186 IICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYG 243
+KLV KI+ AIG+ + + G L I+ F + G+ + GYG
Sbjct: 335 -------------DKLVLSKIRKAIGVENGNIFPTAGAPLSDTINEFLHSCGINIIYGYG 381
Query: 244 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 303
L+E++ + + G+VG + ++K+ E NE+L V+G VM+GY
Sbjct: 382 LSETTATVTCFEISGYEFGTVGTTLPGIQVKM--GEDNEIL---------VKGGTVMKGY 430
Query: 304 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 363
+K P T + +DGW TGD G + G LVL R KD STG+ +
Sbjct: 431 YKKPEETAKVFTKDGWFKTGDAGKLNAE----------GSLVLTERIKDLFKTSTGKYIA 480
Query: 364 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKT 423
P +E I Q+ VIG ++ AII+P E + A + I + + EL K ++
Sbjct: 481 PQAIETKLGEDKYIDQVAVIGDQRKYVTAIIIPAYEALKEYAAQKQIQYRNLEELVKNQS 540
Query: 424 ISLLYGE 430
I L E
Sbjct: 541 IQKLIQE 547
>gi|262405353|ref|ZP_06081903.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|293370545|ref|ZP_06617097.1| AMP-binding enzyme [Bacteroides ovatus SD CMC 3f]
gi|294644597|ref|ZP_06722350.1| AMP-binding enzyme [Bacteroides ovatus SD CC 2a]
gi|294810339|ref|ZP_06769000.1| AMP-binding enzyme [Bacteroides xylanisolvens SD CC 1b]
gi|336404562|ref|ZP_08585255.1| hypothetical protein HMPREF0127_02568 [Bacteroides sp. 1_1_30]
gi|345507938|ref|ZP_08787579.1| hypothetical protein BSAG_00060 [Bacteroides sp. D1]
gi|229442559|gb|EEO48350.1| hypothetical protein BSAG_00060 [Bacteroides sp. D1]
gi|262356228|gb|EEZ05318.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292634279|gb|EFF52816.1| AMP-binding enzyme [Bacteroides ovatus SD CMC 3f]
gi|292640034|gb|EFF58299.1| AMP-binding enzyme [Bacteroides ovatus SD CC 2a]
gi|294442447|gb|EFG11253.1| AMP-binding enzyme [Bacteroides xylanisolvens SD CC 1b]
gi|335941466|gb|EGN03319.1| hypothetical protein HMPREF0127_02568 [Bacteroides sp. 1_1_30]
Length = 604
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 131/443 (29%), Positives = 206/443 (46%), Gaps = 54/443 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHV 78
E DD+A +YTSGTTG PKGVML H L Q + D + + D ++ LP HV
Sbjct: 175 ERASYDDLANILYTSGTTGEPKGVMLHHSCYLEQFHTHDDRLTTMSDKDVSMNFLPLTHV 234
Query: 79 YERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
+E+A Y +G+++ + +++ ++ +P M SVP +E +Y+G+Q++I ++
Sbjct: 235 FEKAWCYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKINETTG 294
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
++ + IR+ RI+ R K P + L +
Sbjct: 295 LKKALMLDAIRVG-------RIH-NLDYLRLGKTPPVMNQL---------------KYKF 331
Query: 198 AEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
EK +Y ++ IGI + G ++P I+ F ++G+ + VGYGLTES+ ++
Sbjct: 332 YEKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVGYGLTESTATVSCTL 391
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
P +GSVG + E+KI E NE+L +RG + +GY+K AT A++
Sbjct: 392 PVGYDIGSVGVVLPGIEVKI--GEDNEIL---------LRGKTITKGYYKKAEATAAAIE 440
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
DGW +TGD G+ G L L R KD S G+ V P LE +
Sbjct: 441 PDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNGKYVAPQALETKLVIDR 489
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT 435
I QI +I ++ A+IVP V A+ I + D EL K I L+ R T
Sbjct: 490 YIDQIAIIADQRKFVSALIVPVYGFVKEYAEEKGIKYKDMEELLKHPKIVGLF-RARIDT 548
Query: 436 SKCSF----QIGPIHVVDEPFTV 454
+ F QI ++ EPF++
Sbjct: 549 LQQQFAHYEQIKRFTLLPEPFSM 571
>gi|145595792|ref|YP_001160089.1| AMP-dependent synthetase and ligase [Salinispora tropica CNB-440]
gi|145305129|gb|ABP55711.1| AMP-dependent synthetase and ligase [Salinispora tropica CNB-440]
Length = 599
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 183/386 (47%), Gaps = 51/386 (13%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDKFLSMLPP 75
+ + +DD+AT VYTSGTTG PKG MLTH+++L + + ++P G L LP
Sbjct: 172 RRAAVHADDLATLVYTSGTTGRPKGCMLTHRSMLADVANAVPVLPNLFGPGASTLLFLPL 231
Query: 76 WHVYERACGYFIF-SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 134
H + R + +R +L LQ +P +++SVP V+E +Y+ KQ
Sbjct: 232 AHAFARLIQVGVVQARATMAHCPDTNDLLSRLQTVRPTFVLSVPRVFEKVYNS-AKQKAD 290
Query: 135 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 194
+S R+ ARA ++ AY+ G L L
Sbjct: 291 ASGKGRIFARAEA-VAIAYSESLETSSGPGLA------------------------LRVQ 325
Query: 195 HLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 253
H L ++LVY+K+++A+ G +SGG L + F+ +GV + GYGLTE+SP +A
Sbjct: 326 HALFDRLVYRKLRAALGGRCSDAISGGAPLGARLGHFFRGVGVVIYEGYGLTETSPAASA 385
Query: 254 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 313
P +GSVG P+ I+I D G V + G V +GY++N +A+
Sbjct: 386 NLPDAIRIGSVGRPLPGVTIRIDD-----------DGEVLIAGDLVFKGYWRNEAASADV 434
Query: 314 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 373
L DGW TGD+G + G L + GR K+ IV + G+NV P LE+
Sbjct: 435 LTADGWFRTGDLGQL----------DSDGYLRITGRKKEIIVTAGGKNVAPAVLEDQVRA 484
Query: 374 SSLIRQIVVIGQDQRRPGAIIVPDKE 399
++ Q VVIG Q A++ D+E
Sbjct: 485 HPMVSQCVVIGDRQPFVAALVTVDEE 510
>gi|323495983|ref|ZP_08101047.1| long-chain acyl-CoA synthetase [Vibrio sinaloensis DSM 21326]
gi|323318945|gb|EGA71892.1| long-chain acyl-CoA synthetase [Vibrio sinaloensis DSM 21326]
Length = 602
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 129/430 (30%), Positives = 202/430 (46%), Gaps = 55/430 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+ T +YTSGTTG PKGVML + N+ Q+ + D L LP HV+ERA
Sbjct: 178 DDLLTLIYTSGTTGQPKGVMLDYANIGAQLEGHDQRLSLSEDDVSLCFLPLSHVFERAWT 237
Query: 85 YFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
+++ +G Y ++D L +P M +VP YE ++S I +++ + R+V+
Sbjct: 238 FYVLYKGATNCYLQDTMQVRDALADVRPTVMSAVPRFYEKIFSAIHEKVAKAPFIRKVLF 297
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
+ + A + EG + PS+ L H LA+KLV
Sbjct: 298 TWAVNMGAKMAACHQ--EG-------RNPSF---------------ALKKAHGLADKLVL 333
Query: 204 KKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++ C
Sbjct: 334 SKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDQCFDPD 393
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G + ++KI E NE+L VRG VM+GY+K P T + DE G+L T
Sbjct: 394 SIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETAKTFDEHGFLKT 442
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD G I + G L + R K+ + S G+ + P +E + I QI V
Sbjct: 443 GDAGHIDEN----------GNLFITDRIKELMKTSNGKYIAPQMVEGTIGKDHFIEQIAV 492
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 434
I ++ A+IVP + + AK L+I + D EL K E+ ++ L EL K+
Sbjct: 493 IADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQIVEMLEQRVNDLQKELAKF 552
Query: 435 TSKCSFQIGP 444
F++ P
Sbjct: 553 EQVKKFKLLP 562
>gi|329954188|ref|ZP_08295283.1| AMP-binding enzyme [Bacteroides clarus YIT 12056]
gi|328528165|gb|EGF55145.1| AMP-binding enzyme [Bacteroides clarus YIT 12056]
Length = 593
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 132/444 (29%), Positives = 206/444 (46%), Gaps = 62/444 (13%)
Query: 23 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM--LPPWHVYE 80
DD+A +YTSGTTG PKGVML H N IR ++DI DK +SM LP HV+E
Sbjct: 170 SDDDLANILYTSGTTGEPKGVMLHHFNYREAIR-IHDIRLTAMTDKDVSMNFLPLTHVFE 228
Query: 81 RACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
+A Y RG+++ + +++ ++ +P M SVP +E +Y+G+Q++I + R
Sbjct: 229 KAWTYLCIHRGVQVCINLRPADIQTTIKEVRPTLMCSVPRFWEKVYAGVQEKIAQETGLR 288
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL--- 196
+ + I++ + ID+L R+ LHL
Sbjct: 289 KAMMLDAIKVGKMHN------------------------IDYL--RVGKTPPLMLHLKYK 322
Query: 197 LAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
EK +Y ++ IGI + G ++ I F ++G+ + VGYGLTES+ ++
Sbjct: 323 FYEKTIYALLKKTIGIENGNFFPTAGAAVSDEICEFVHSVGINMVVGYGLTESTATVSCF 382
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
+GSVG + E+KI E NE+L +RG + GY+K P AT A+
Sbjct: 383 LDKGYEIGSVGTVMPDLEVKI--GENNEIL---------LRGKTITTGYYKKPEATAAAI 431
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
D+DGW +TGD G++ H L L R KD S G+ + P LE
Sbjct: 432 DKDGWFHTGDAGYLKDDH-----------LYLTERIKDLFKTSNGKYISPQALETKLAID 480
Query: 375 SLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW 434
I QI +I ++ A+IVP V AK + + D ++L + + L+ R
Sbjct: 481 RYIDQIAIIADQRKFVSALIVPVYGLVKNYAKEKGLEYKDMADLLQHPKVQALF-RARID 539
Query: 435 TSKCSF----QIGPIHVVDEPFTV 454
T + F Q+ ++ EPF +
Sbjct: 540 TLQQQFANYEQVKRFTLLPEPFNM 563
>gi|342904876|ref|ZP_08726672.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M21621]
gi|341952332|gb|EGT78862.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M21621]
Length = 602
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 191/407 (46%), Gaps = 47/407 (11%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 178 DLFTIIYTSGTTGEPKGVMLDYANLAHQLEAHDLSLNVTDQDVSLSFLPFSHIFERAWAA 237
Query: 86 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 238 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 297
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
I + + F L N K +L L LA+KLV
Sbjct: 298 WAISVGQKH---------FDLRANNKTVPFL---------------LKKQFALADKLVLS 333
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 334 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 393
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
+G + E+KI E NE+L VRG VM+GY+K T QA EDG+L TG
Sbjct: 394 IGTLMPKAEVKI--GENNEIL---------VRGGMVMKGYYKKSEETAQAFTEDGFLKTG 442
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 443 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 492
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
++ A+IVP + + AK+L+I + D EL K I ++ +
Sbjct: 493 ADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSEILKMFEQ 539
>gi|315604688|ref|ZP_07879751.1| long-chain-fatty-acid--CoA ligase [Actinomyces sp. oral taxon 180
str. F0310]
gi|315313700|gb|EFU61754.1| long-chain-fatty-acid--CoA ligase [Actinomyces sp. oral taxon 180
str. F0310]
Length = 627
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 124/387 (32%), Positives = 181/387 (46%), Gaps = 53/387 (13%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP---AENGDKFLSMLP 74
+ E + DDI+T VYTSGTTG PKG +L+H+N + + + +P A + L LP
Sbjct: 197 RSEALTKDDISTIVYTSGTTGTPKGTVLSHENFTNLCLNAHAWMPEIAAGTTSRLLLFLP 256
Query: 75 PWHVYERACGYF-IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 133
HV+ R F I G+ ++NL DL ++P Y++ VP V E +Y+ +
Sbjct: 257 LAHVFARFLQVFQISGNGVMGHAPNIKNLLPDLASFRPSYLLVVPRVLEKIYNSADTK-- 314
Query: 134 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
S +R V R +++ AY+ EG PS A L
Sbjct: 315 -SRGPKRKVFRWAAKVAIAYSRALDTDEG---------PS---------------ASLKA 349
Query: 194 LHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
H LA+KLVY++I + G + +SGG L + FY IG+ V GYGLTE+ ++
Sbjct: 350 QHALADKLVYQQIIRLVGGNADYIISGGAPLATWLAHFYRGIGIPVLEGYGLTETVGPVS 409
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
P + +G+VG + KI D G + ++G V QGY +P AT
Sbjct: 410 VNTPRLSKIGTVGPALPPMSFKISD-----------DGEILLKGPSVFQGYNNDPGATAA 458
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
+DGW TGD+G S G + + GRAKD IV + G+NV P LE
Sbjct: 459 CFTDDGWFRTGDLG----------SLDRDGYVSITGRAKDIIVTAGGKNVTPASLENPMR 508
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKE 399
LI Q++V+G + A+I D E
Sbjct: 509 SHPLISQVLVVGDQRPFVAALITLDAE 535
>gi|451965692|ref|ZP_21918949.1| putative long-chain fatty-acid--CoA ligase [Edwardsiella tarda NBRC
105688]
gi|451315494|dbj|GAC64311.1| putative long-chain fatty-acid--CoA ligase [Edwardsiella tarda NBRC
105688]
Length = 600
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 199/411 (48%), Gaps = 50/411 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI-VPAENGDKFLSMLPPWHVYERAC 83
DD+ T +YTSGTTG PKGVML ++NL Q+ L+D + + D L LP HV+ERA
Sbjct: 180 DDLFTLIYTSGTTGEPKGVMLDYRNLAAQL-YLHDARLNVSDQDVSLCFLPLSHVFERAW 238
Query: 84 GYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
+++ G + +Y NL ++ +Q +P M +VP YE ++S +Q ++ + RR +
Sbjct: 239 SFYVMHSGAQNVYLHDTNLVREAMQAVRPTMMCAVPRFYEKIFSAVQAKVAQAPWLRRQL 298
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
R + F R G R + ++ +H A++LV
Sbjct: 299 FRWAVWC--GEQRFLRERAG----------------------RPLSGMMAAMHRAADRLV 334
Query: 203 YKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
K++ +G + + G L + LF++A+G+ ++ GYG+TE+ ++
Sbjct: 335 LGKLRDILGGRVRFLPAAGAKLDDQVILFFQALGLNIKYGYGMTETCATVSCWEEHDFRF 394
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
GS+G P+ E++I AE NE+ +VRG VM+GYF P T Q+ DGWL
Sbjct: 395 GSIGRPLPGIEVRI--AEENEI---------QVRGPIVMRGYFNKPQETAQSFTADGWLK 443
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD G + G L + R KD + S G+ + P +E R I Q+
Sbjct: 444 TGDAGALDAQ----------GNLFITERLKDLMKTSNGKYIAPQLVEGTLARDRFIEQVA 493
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELR 432
VI ++ A+IVP + + A+ +++ + D +L + I ++ ELR
Sbjct: 494 VIADARKFVSALIVPCFDALEEYARSINLKYHDRLDLLRHSHIVEMF-ELR 543
>gi|377573521|ref|ZP_09802577.1| long-chain fatty-acid--CoA ligase [Mobilicoccus pelagius NBRC
104925]
gi|377537636|dbj|GAB47742.1| long-chain fatty-acid--CoA ligase [Mobilicoccus pelagius NBRC
104925]
Length = 607
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 203/443 (45%), Gaps = 51/443 (11%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
K E + D T +YTSGTTG PKGV+LT + ++ + + G++ +S LP H
Sbjct: 183 KEEEVDPDTPVTIIYTSGTTGAPKGVVLTQRAYSRELYVIDTLFGLPRGERNMSFLPLSH 242
Query: 78 VYERACGYFIFSRGIE-LMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
YER Y + G+E T + + + +P +SVP +YE +Y+G Q+
Sbjct: 243 AYERGWTYCALASGMENCSVTDPKTVAAAMLDIRPATFVSVPRLYEKVYAGAH-QLAGEG 301
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
RR+ AL R+ G + R +++ R + L H
Sbjct: 302 VKRRLFDWAL-RV------------GADVQRRRRE------------GRPVPRTLAARHA 336
Query: 197 LAEKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LA++LV ++ +G K ++ GG+ L ++ F+ A G+ + GYGLTE++P+++
Sbjct: 337 LADRLVLHNVRDVVGGEKYVMAAGGAPLRQEVEEFFLAAGLPIYQGYGLTETAPLVSCNA 396
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
P G+ G P+ TE++I D ET E+L VRG V GY+ P T +D
Sbjct: 397 PGAVKSGTAGRPVPGTEVRISD-ETGEIL---------VRGDNVTPGYYNRPEETAAVID 446
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
E+GW +TGD+G + G L++ R KD IV G+N+ P +E A
Sbjct: 447 EEGWFHTGDVGHLD----------ADGYLLITDRIKDLIVTMQGKNIAPGPIESALTADP 496
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT 435
L+ VVIG + A+I P EE+ A+ EL + Y +L
Sbjct: 497 LVEAAVVIGDGRPYLTALIQPSFEELEHRAREKGWASDSTEELLARGEVEQYYDDLIARV 556
Query: 436 SKCSF---QIGPIHVVDEPFTVN 455
+ S +I ++ EP T++
Sbjct: 557 GRDSARYERIQKFRLLSEPLTMD 579
>gi|440229441|ref|YP_007343234.1| AMP-forming long-chain acyl-CoA synthetase [Serratia marcescens
FGI94]
gi|440051146|gb|AGB81049.1| AMP-forming long-chain acyl-CoA synthetase [Serratia marcescens
FGI94]
Length = 599
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 195/412 (47%), Gaps = 50/412 (12%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+ T +YTSGTTG PKGVML ++N+ Q+ D + D LS LP HV+ERA +
Sbjct: 182 DLFTLIYTSGTTGEPKGVMLDYRNMAAQLCQHDDRLTVGEEDVSLSFLPLSHVFERAWSF 241
Query: 86 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
FI G + ++ + +++ + +P M +VP YE ++S + +++ + RR++ R
Sbjct: 242 FIMHSGAQNVFLPNTDWVREAMTAVRPTVMCAVPRFYEKIFSAVHEKVARAPWWRRLLFR 301
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL-HLLAEKLVY 203
I C R Q A C L L H A+KLV
Sbjct: 302 WAIG---------------CGERKFLQER----------AGTPCGRLSALTHRWADKLVL 336
Query: 204 KKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K++ +G + + G L ++ LF++A+GV ++ GYG+TE+ ++ G
Sbjct: 337 SKLRGLLGGRVRFLPAAGAKLDDNVILFFQALGVNIKYGYGMTETCATVSCWEEHDFRFG 396
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G P+ E++I AE NE ++VRG VM+GYF P T Q DGWL T
Sbjct: 397 SIGKPLPDVEVRI--AEENE---------IQVRGPVVMRGYFNKPLETAQTFTADGWLKT 445
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD G + G L + R KD + S G+ + P LE + I Q+ V
Sbjct: 446 GDAGAVDEQ----------GNLFITERLKDLMKTSGGKYIAPQMLEGTLAQDRFIEQVAV 495
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRK 433
I ++ A+IVP E + AK L++ + D EL + + I + LR+
Sbjct: 496 IADARKFVSALIVPCFESLEEYAKSLNLKYHDRLELLRHSQIIEMFEARLRE 547
>gi|294634995|ref|ZP_06713512.1| putative CoA ligase [Edwardsiella tarda ATCC 23685]
gi|291091594|gb|EFE24155.1| putative CoA ligase [Edwardsiella tarda ATCC 23685]
Length = 603
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 199/411 (48%), Gaps = 50/411 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI-VPAENGDKFLSMLPPWHVYERAC 83
DD+ T +YTSGTTG PKGVML ++NL Q+ L+D + + D L LP HV+ERA
Sbjct: 183 DDLFTLIYTSGTTGEPKGVMLDYRNLAAQL-YLHDARLNVSDQDVSLCFLPLSHVFERAW 241
Query: 84 GYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
+++ G + +Y NL ++ +Q +P M +VP YE ++S +Q ++ + RR +
Sbjct: 242 SFYVMHSGAQNVYLHDTNLVREAMQAVRPTMMCAVPRFYEKIFSAVQAKVAQAPWLRRQL 301
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
R + F R G R + ++ +H A++LV
Sbjct: 302 FRWAVWC--GEQRFLRERAG----------------------RPLSGMMAAMHRAADRLV 337
Query: 203 YKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
K++ +G + + G L + LF++A+G+ ++ GYG+TE+ ++
Sbjct: 338 LGKLRDILGGRVRFLPAAGAKLDDQVILFFQALGLNIKYGYGMTETCATVSCWEEHDFRF 397
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
GS+G P+ E++I AE NE+ +VRG VM+GYF P T Q+ DGWL
Sbjct: 398 GSIGRPLPGIEVRI--AEENEI---------QVRGPIVMRGYFNKPQETAQSFTADGWLK 446
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD G + G L + R KD + S G+ + P +E R I Q+
Sbjct: 447 TGDAGALDAQ----------GNLFITERLKDLMKTSNGKYIAPQLVEGTLARDRFIEQVA 496
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELR 432
VI ++ A+IVP + + A+ +++ + D +L + I ++ ELR
Sbjct: 497 VIADARKFVSALIVPCFDALEEYARSINLKYHDRLDLLRHSHIVEMF-ELR 546
>gi|317493293|ref|ZP_07951715.1| AMP-binding enzyme [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316918686|gb|EFV40023.1| AMP-binding enzyme [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 600
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 210/443 (47%), Gaps = 52/443 (11%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ E D+ T +YTSGTTG PKGVML + N+ Q+R + + D L LP H
Sbjct: 173 RIEQADMSDLFTLIYTSGTTGEPKGVMLNYTNMGAQLRLHDERLTVTAEDVSLCFLPLSH 232
Query: 78 VYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ERA +++ G + +Y + N +++ +Q +P M +VP YE ++S I +++ +
Sbjct: 233 VFERAWSFYVMHSGAQNVYLSDTNQVREAMQSVKPTVMCAVPRFYEKIFSAIHEKVAQAK 292
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
+R + + I + KR F R +P+ +L +H
Sbjct: 293 WHKRAMFKCAI-----WVGEKR----FLTERAGCKPN---------------VVLSAMHK 328
Query: 197 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LA+KLV K++ +G + + G L ++ LF++A+G ++ GYG+TE+ ++
Sbjct: 329 LADKLVLSKLRGILGGRVRFLPAAGAKLDDNVILFFQALGANIKYGYGMTETCATVSCWE 388
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
GS+G P+ E++I G + ++VRG VM GY+ P T
Sbjct: 389 ENDFRFGSIGKPLPDVEVRI-----------GHENEIQVRGPIVMCGYYNKPLETAATFT 437
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
EDGWL TGD G + + G L + R KD + S G+ + P +E +
Sbjct: 438 EDGWLKTGDAGALDEN----------GNLFITERLKDLMKTSNGKYIAPQMVEGTLAQDR 487
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYG----EL 431
I Q+ VI ++ A+IVP E + AK +++ + D +L + I ++ E+
Sbjct: 488 FIEQVAVIADARKFVSALIVPCFESLEEYAKSINLKYHDRLDLLRHSHIVEMFDQRLREM 547
Query: 432 RKWTSKCSFQIGPIHVVDEPFTV 454
+K +K Q+ ++ E F++
Sbjct: 548 QKGLAKFE-QVKRFTLLPEAFSM 569
>gi|82702546|ref|YP_412112.1| AMP-dependent synthetase and ligase [Nitrosospira multiformis ATCC
25196]
gi|82410611|gb|ABB74720.1| AMP-dependent synthetase and ligase [Nitrosospira multiformis ATCC
25196]
Length = 645
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 127/403 (31%), Positives = 201/403 (49%), Gaps = 49/403 (12%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 83
S +AT VYTSGTTG PKGVML+H N+L + + D +LS+LP H+ ER
Sbjct: 225 SHALATLVYTSGTTGKPKGVMLSHFNVLWNAEATLQAISGYPEDVYLSLLPLSHMLERTA 284
Query: 84 GYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
Y++ G + Y ++++L +DL+ +P ++VP V Y GI+ ++ R
Sbjct: 285 SYYVPLMAGSSVAYARSLKDLPEDLKSVRPGIFVAVPQV----YVGIRNKMNQQVQERGW 340
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
VAR L+ + A +KR F + + Q + LW R+ WP + +L
Sbjct: 341 VARLLLDWTVAL-GWKR----FTVVQAQGKER--------LWQRVA----WP---ILRQL 380
Query: 202 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
V K+ +A G + VSGGG L + ++ +G+ + GYGLTE+SP++ A R N+
Sbjct: 381 VAAKVLAAFGGRLRLAVSGGGPLHADVSRYFIGLGLPLLQGYGLTEASPILTANRLQDNM 440
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
GS G + E++I E E+L R VM GY+ P T+ A+D +GWL
Sbjct: 441 PGSTGSALLGVELRI--GEQRELL---------ARSPGVMLGYWNRPEETRAAIDAEGWL 489
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
+TGD I+ +H + + GR K+ +V S+GE V +LE + ++ L Q+
Sbjct: 490 HTGDQARISDNH-----------VFISGRIKEILVTSSGEKVPSGDLEMSIVQEPLFDQV 538
Query: 381 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKT 423
+V+G+ + A+ V +K E A L + + LS T
Sbjct: 539 MVVGEGRPYLTALAVVNKREWRNLASSLGLKTDEVQSLSHSAT 581
>gi|427384503|ref|ZP_18881008.1| hypothetical protein HMPREF9447_02041 [Bacteroides oleiciplenus YIT
12058]
gi|425727764|gb|EKU90623.1| hypothetical protein HMPREF9447_02041 [Bacteroides oleiciplenus YIT
12058]
Length = 616
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 132/441 (29%), Positives = 210/441 (47%), Gaps = 58/441 (13%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM--LPPWHVYER 81
DD+A +YTSGTTG PKGVML H N + R ++DI + D+ +SM LP HV+E+
Sbjct: 194 DDDLANILYTSGTTGEPKGVMLHHSNYIEAFR-IHDIRLVDMTDQDISMNFLPLTHVFEK 252
Query: 82 ACGYFIFSRGIELMYTAVR--NLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
A Y +G+++ +R +++ ++ +P M SVP +E +Y+G+Q++I + +
Sbjct: 253 AWTYLCIYKGVQICIN-LRPVDIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKIAQETGLK 311
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + I++ +I+ R K P ++ L + E
Sbjct: 312 KAMMLDAIKVG-------KIH-NIDYLRKGKTPPLMLHL---------------KYKFYE 348
Query: 200 KLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
K VY ++ IGI + G ++P I F ++G+ + VGYGLTES+ ++ +
Sbjct: 349 KTVYALLKKTIGIENGNFFPTAGAAVPDEICEFVHSVGINMLVGYGLTESTATVSCFLNS 408
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
+GSVG + E+KI E NE+L +RG + +GY+K AT A+D+D
Sbjct: 409 GYEIGSVGTIMPDVEVKI--GEENEIL---------LRGKTITKGYYKKAEATAAAIDKD 457
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GW +TGD G++ G L L R KD S G+ V P LE I
Sbjct: 458 GWFHTGDAGYLK-----------GDQLYLTERIKDLFKTSNGKYVSPQALETKLAIDRYI 506
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 437
QI +I ++ A+IVP V AK I + D EL + I L+ R T +
Sbjct: 507 DQIAIIADQRKFVSALIVPVYGYVKEYAKEKGIEYKDMEELLQHPKILGLF-RARIDTLQ 565
Query: 438 CSF----QIGPIHVVDEPFTV 454
F Q+ ++ EPF++
Sbjct: 566 QQFAHYEQVKRFTLLPEPFSM 586
>gi|251791879|ref|YP_003006599.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter aphrophilus NJ8700]
gi|247533266|gb|ACS96512.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter aphrophilus NJ8700]
Length = 595
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 199/430 (46%), Gaps = 55/430 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+D+ T +YTSGTTG PKGVML + NL HQ+++ + ++ D LS LP H++ERA
Sbjct: 177 EDLFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDQALKVDDSDVSLSFLPLSHIFERAWV 236
Query: 85 YFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
++ RG Y N ++ L +P M +VP YE +Y+ I ++ + R+ +
Sbjct: 237 AYVLHRGAANCYIEDTNQVRSALTEIRPTLMCAVPRFYEKIYTAILDKVHNAPKLRQWIF 296
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
+ I + L + QK I +L + LA KLV
Sbjct: 297 HWAMAIGHQHFD--------ALAKGQK----------------IGFLLKQQYSLANKLVL 332
Query: 204 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K+++ +G + GG L I LF+ +IG+ +++GYG+TE++ ++
Sbjct: 333 GKLRALLGGRIRMMPCGGAKLEPTIGLFFHSIGLNIKLGYGMTETTATVSCWDDVNFNAN 392
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G + E+KI E NE+L VRG VM+GY+K P T +A DG+L T
Sbjct: 393 SIGSLMPGAEVKI--GENNEIL---------VRGGMVMKGYYKKPQETAEAFTADGFLKT 441
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD G G L + R K+ + S G+ + P LE + I QI V
Sbjct: 442 GDAG----------EFDANGNLYITDRIKELMKTSNGKYIAPQVLESKIGKDKFIEQIAV 491
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 434
I ++ A+IVP + AK+++I + D EL K E+ I+ L EL W
Sbjct: 492 IADAKKYVSALIVPCYTALEEYAKQVNIKYQDRLELLKNSEIIQMLERRINDLQKELAGW 551
Query: 435 TSKCSFQIGP 444
F + P
Sbjct: 552 EQIKRFTLLP 561
>gi|241767571|ref|ZP_04765237.1| AMP-dependent synthetase and ligase [Acidovorax delafieldii 2AN]
gi|241361563|gb|EER57960.1| AMP-dependent synthetase and ligase [Acidovorax delafieldii 2AN]
Length = 427
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 125/431 (29%), Positives = 214/431 (49%), Gaps = 45/431 (10%)
Query: 31 VYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHVYERACGYFI-F 88
VYTSGTTG PKGVMLTH+N++ ++++ + IVP + D FLS LP H +ER GY++
Sbjct: 3 VYTSGTTGKPKGVMLTHRNVVSDVKAVLERIVPTAD-DVFLSFLPLSHTFERTGGYYLPM 61
Query: 89 SRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 147
+ G + Y +V L +DL+ +P ++SVP +YE +++ + +++ +
Sbjct: 62 AAGSCVAYARSVPLLAEDLKAVRPTVLVSVPRIYERIHAKLLEKLSPTP----------W 111
Query: 148 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 207
++ A + + FC ++ P+ + W + A+ WP + + LV K +
Sbjct: 112 KMQLYEAAQNKGWARFCASQGLPAPTPDASSQAAGW---MAALPWP---VLQALVAKPLL 165
Query: 208 SAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 266
+ G + VSGG L I + +G+ + GYG+TE++PV++ N VG
Sbjct: 166 AQFGGRVRVAVSGGAPLSPTIAKCFLGLGLPLIQGYGMTETAPVVSVNALGDNDPACVGK 225
Query: 267 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG 326
++ E++I D ++VRG VM+GY+K P T + LD +GWL TGD
Sbjct: 226 ALSGVEVRIGDNRE-----------LQVRGPIVMKGYWKRPEDTARILDPEGWLGTGD-- 272
Query: 327 WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD 386
++ G + ++GR K+ IV STGE + P +LE A L L+ Q V+G++
Sbjct: 273 ---------QAEIVNGRIYIKGRIKEIIVTSTGEKIPPGDLELALLADPLLEQAFVVGEN 323
Query: 387 QRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGP-- 444
+ + V + E + A L + A L+ + + K T+ + P
Sbjct: 324 RPFIACVAVVKRGEWVRLAADLGLNPQAADSLNHPSVHRAVLARIEKNTASFARYAVPRA 383
Query: 445 IHVVDEPFTVN 455
+H+ EP+T+
Sbjct: 384 VHLTLEPWTIE 394
>gi|443672727|ref|ZP_21137807.1| Tyrocidine synthase 3 [Rhodococcus sp. AW25M09]
gi|443414573|emb|CCQ16145.1| Tyrocidine synthase 3 [Rhodococcus sp. AW25M09]
Length = 601
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 122/392 (31%), Positives = 183/392 (46%), Gaps = 60/392 (15%)
Query: 16 HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ---IRSLYDIVPAENGDKFLSM 72
H + +GS D AT +YTSGTTG PKGV LTH NLL + IR G L
Sbjct: 173 HQRVSALGSSDPATLIYTSGTTGRPKGVQLTHANLLAESLGIRETSLKSLMTQGRSTLMF 232
Query: 73 LPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
LP HV RA F G+ L +T + NL +QP +++SVP V+E +++ +++
Sbjct: 233 LPLAHVLARAVSIASFDAGVTLGHTNDIPNLVSTFGTFQPDFILSVPRVFEKVFNTAKQK 292
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICA-- 189
+ + F E C + W A+
Sbjct: 293 AHSDGKGK---------------IFDLATE--CA-------------VSWSEAQDTGGPG 322
Query: 190 -ILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTES 247
+L H + +KLVY K+++A+G + +SGG L + FY IGV + GYGLTE+
Sbjct: 323 IVLRAKHTVFDKLVYDKLRAALGGRCELAISGGAPLGSRLGHFYRGIGVPIYEGYGLTET 382
Query: 248 SPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNP 307
+ A +GSVG P+ ++I + G +++RG V GY++N
Sbjct: 383 TAAFAVNTIGSQRVGSVGRPLPGNTVRIAE-----------DGEIQLRGPVVFDGYWRNE 431
Query: 308 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 367
AT ++LD DGW TGD+G + G + + GR K+ IV + G+NV P L
Sbjct: 432 DATAESLD-DGWFRTGDLGSVDED----------GFITISGRKKELIVTAGGKNVSPAGL 480
Query: 368 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
E++ +LI Q VV+G + GA+I D +
Sbjct: 481 EDSLRAHALISQAVVVGDQKPFIGALITLDPD 512
>gi|357462835|ref|XP_003601699.1| 4-coumarate-CoA ligase [Medicago truncatula]
gi|355490747|gb|AES71950.1| 4-coumarate-CoA ligase [Medicago truncatula]
Length = 346
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 75/99 (75%), Positives = 89/99 (89%)
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
V+GSVGHP+ HTE K+VD+ET EVLP G KGI+KVRG Q+M+GY+KNPSAT QA+D+DGW
Sbjct: 39 VIGSVGHPLKHTEFKVVDSETGEVLPPGYKGILKVRGPQLMKGYYKNPSATNQAIDKDGW 98
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 358
LNTGDIGWIA +HS GRSR CGGV+V+EGRAKDTIVLS+
Sbjct: 99 LNTGDIGWIAAYHSSGRSRNCGGVIVVEGRAKDTIVLSS 137
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/102 (61%), Positives = 86/102 (84%), Gaps = 1/102 (0%)
Query: 354 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA 413
+ + GENVEP+ELEEAA+RSSLI+QIVVIGQD+RR GA++VP+KE VL AA+ LSI+ +
Sbjct: 218 VSIREGENVEPVELEEAAMRSSLIQQIVVIGQDKRRLGAVVVPNKE-VLKAARELSIIDS 276
Query: 414 DASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 455
++S+LS+E SL+Y ELR WTS+ FQIGPI +V++PFT++
Sbjct: 277 NSSDLSQENVTSLIYNELRTWTSEFPFQIGPILLVNDPFTID 318
>gi|386833922|ref|YP_006239236.1| FAA1 protein [Pasteurella multocida subsp. multocida str. 3480]
gi|385200622|gb|AFI45477.1| FAA1 protein [Pasteurella multocida subsp. multocida str. 3480]
Length = 606
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 197/410 (48%), Gaps = 50/410 (12%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRS---LYDIVPAENGDKFLSMLPPWHVYERA 82
D+ T +YTSGTTG PKGVML + NL HQ+++ + + D LS LP H++ERA
Sbjct: 179 DLFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDEAFTTLNVSQYDSSLSFLPLSHIFERA 238
Query: 83 CGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
++ RG Y N +++ L +P M +VP YE +Y+ + ++ + RR+
Sbjct: 239 WVAYVLHRGAVNCYLEDTNRVREALSEIRPTLMCAVPRFYEKIYTAVWDKVQKAPLFRRM 298
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
+ I + F+ I ++K+P I +L + LA+KL
Sbjct: 299 IFNWAIAV--GQKRFQFI--------SKKKP--------------IPFVLRQQYALADKL 334
Query: 202 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
V K++ +G + GG L +I LF+ +IG+ V++GYG+TE++ ++
Sbjct: 335 VLSKLRQLLGGRIRMMPCGGAKLEPNIGLFFHSIGINVKLGYGMTETTATVSCWEEGHFE 394
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
S+G + E+KI E NE+L VRG VM+GY+K P T + EDG+L
Sbjct: 395 PNSIGTLMPGAEVKI--GENNEIL---------VRGGMVMRGYYKKPQETADSFTEDGFL 443
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
TGD G P G L + R K+ + S G+ + P +E + I QI
Sbjct: 444 KTGDAGEFDPQ----------GNLYITDRIKELMKTSNGKYIAPQYIETKVGKDKFIEQI 493
Query: 381 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
VI ++ A+IVP + AK+L+I + D EL K I ++ +
Sbjct: 494 AVIADAKKYVSALIVPCFNSLEEYAKQLNIKYHDRLELIKHSDILQMFEQ 543
>gi|218131878|ref|ZP_03460682.1| hypothetical protein BACEGG_03500 [Bacteroides eggerthii DSM 20697]
gi|217986181|gb|EEC52520.1| AMP-binding enzyme [Bacteroides eggerthii DSM 20697]
Length = 593
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 133/444 (29%), Positives = 207/444 (46%), Gaps = 62/444 (13%)
Query: 23 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM--LPPWHVYE 80
+D+A +YTSGTTG PKGVML H N IR ++DI DK +SM LP HV+E
Sbjct: 170 SDEDLANILYTSGTTGEPKGVMLHHFNYREAIR-IHDIRLTAMTDKDVSMNFLPLTHVFE 228
Query: 81 RACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
+A Y RG+++ + +++ ++ +P M SVP +E +Y+G+Q++I + R
Sbjct: 229 KAWTYLCIHRGVQVCINLRPADIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKIAQETGLR 288
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL--- 196
+ + I++ + ID+L +L LHL
Sbjct: 289 KAMMLDAIKVGKMHN------------------------IDYLRVGKTPPLL--LHLKYK 322
Query: 197 LAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
EK +Y ++ IGI + G ++P I F ++G+ + VGYGLTES+ ++
Sbjct: 323 FYEKTIYALLKKTIGIENGNFFPTAGAAVPDEICEFVHSVGINMIVGYGLTESTATVSCF 382
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
+GSVG + E+KI E NE+L +RG + GY++ P AT A+
Sbjct: 383 PDKGYEIGSVGTLMPDVEVKI--GENNEIL---------LRGKTITTGYYRKPEATADAI 431
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
D+DGW +TGD G + H L L R KD S G+ V P LE
Sbjct: 432 DKDGWFHTGDAGHLKDGH-----------LYLTERIKDLFKTSNGKYVSPQALETKLAID 480
Query: 375 SLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW 434
I QI VI ++ A+IVP V AK + + D ++L + + L+ R
Sbjct: 481 RYIDQIAVIADQRKFVSALIVPVYGFVKDYAKEKGLEYKDMADLLQHPKVQALF-RARID 539
Query: 435 TSKCSF----QIGPIHVVDEPFTV 454
T + F Q+ ++ EPF++
Sbjct: 540 TLQQQFAHYEQVKRFTLLPEPFSM 563
>gi|395006484|ref|ZP_10390302.1| AMP-forming long-chain acyl-CoA synthetase [Acidovorax sp. CF316]
gi|394315576|gb|EJE52370.1| AMP-forming long-chain acyl-CoA synthetase [Acidovorax sp. CF316]
Length = 617
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 209/438 (47%), Gaps = 46/438 (10%)
Query: 23 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERA 82
G +D+A VYTSGTTG PKGVMLTH+N++ ++++ + + D FLS LP H +ER
Sbjct: 187 GPEDLAAIVYTSGTTGKPKGVMLTHRNVVSDVKAVLERIAPTVDDVFLSFLPLSHTFERT 246
Query: 83 CGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
GY++ + G + Y +V L +D+Q +P ++SVP +YE +++ + +++ +
Sbjct: 247 GGYYLPIAAGSCVAYARSVAQLAEDMQTIRPTVLVSVPRIYERIHAKLLEKLSPTP---- 302
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
++ A R ++ FC + P A W+ A+ W L +
Sbjct: 303 ------WKMQLYEAAQSRGWQRFCAAQGLPVPEADQA-GGWM-----NALPWG---LLQA 347
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LV K + + G + VSGG L I + +G+ + GYG+TE++PV++ N
Sbjct: 348 LVAKPLLAQFGGRVRVAVSGGAPLSPTIAKCFLGLGLPLVQGYGMTETAPVVSVNSLLDN 407
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
VG + E++I G ++V G VM+GY+K P T + L DGW
Sbjct: 408 DPACVGRALPGVEVRI-----------GENRELQVHGPIVMKGYWKRPEDTARILAADGW 456
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
L TGD ++ G + + GR K+ IV STGE V P +LE A L L+ Q
Sbjct: 457 LGTGD-----------QADIVDGRIYIRGRIKEIIVTSTGEKVPPGDLELALLADPLLEQ 505
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCS 439
V+G+++ A+ V +E A L + D L+ + + K T+ +
Sbjct: 506 AFVVGENRPFIAAVAVLRADEWQRLAGDLGLAAQDPDSLNHPAVHRAVLARIEKSTASFA 565
Query: 440 FQIGP--IHVVDEPFTVN 455
P +H+ P+++
Sbjct: 566 RYAVPRAVHLTLAPWSIE 583
>gi|392389526|ref|YP_006426129.1| AMP-forming long-chain acyl-CoA synthetase [Ornithobacterium
rhinotracheale DSM 15997]
gi|390520604|gb|AFL96335.1| AMP-forming long-chain acyl-CoA synthetase [Ornithobacterium
rhinotracheale DSM 15997]
Length = 591
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 135/458 (29%), Positives = 215/458 (46%), Gaps = 75/458 (16%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP--AENGDKFLSMLPPWH 77
E I DD+ T +YTSGTTG+PKGVML+HKNLL + +P EN + LS LP H
Sbjct: 168 EKIQPDDLVTIIYTSGTTGSPKGVMLSHKNLLSNAIDCQERIPEVGENA-RALSFLPVCH 226
Query: 78 VYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ER +G+ + + + + +DL+ QP M VP + E +++ +I+ +
Sbjct: 227 VFERTLLNLYQIKGLSIYFAQNLDTIGEDLKFVQPQIMTVVPRLVEKVFN----KIYETG 282
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL-H 195
A V + + S + LI ++ + W L +
Sbjct: 283 ANAGPVKSKIFKWS-------------------------LDLIKDYDPKVKMPLNWYLKY 317
Query: 196 LLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
+A KL++ K + +G VSG L ++ + A G+ + GYGLTE+SPVI+
Sbjct: 318 KVANKLIFSKWREGMGGKMVTLVSGSAKLSEKLNRMFWAAGIPILEGYGLTETSPVISVN 377
Query: 255 ---RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 311
R + G+VG + + ++KI D G V V+G V QGY++NP TK
Sbjct: 378 CFDRKGFKI-GTVGKIVKNIDVKIAD-----------DGEVLVKGPCVFQGYYENPELTK 425
Query: 312 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 371
+A EDGW TGDIG G+L L R K S G+ + P LE+A
Sbjct: 426 EAFTEDGWFKTGDIGEFDE-----------GLLKLTDRKKQIFKTSGGKYIVPAALEDAM 474
Query: 372 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSK--------EK 422
R I QI+V+G+ ++ P A+I P+ + + A++ + + +E++K EK
Sbjct: 475 KRIPFIEQIMVVGEGKKMPCALIQPNYDFSIKWAEKNGVEIGTTPAEIAKSEAIYKEIEK 534
Query: 423 TISLLYGELRKWTSKCSFQIGPIHVVDEPFTVNFLCLA 460
++ + E +W F++ P E +T+ CL
Sbjct: 535 AMAEINQEFGRWEQIKRFRLTP-----EEWTIENGCLT 567
>gi|425063621|ref|ZP_18466746.1| Long-chain-fatty-acid--CoA ligase [Pasteurella multocida subsp.
gallicida X73]
gi|404382175|gb|EJZ78636.1| Long-chain-fatty-acid--CoA ligase [Pasteurella multocida subsp.
gallicida X73]
Length = 606
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 197/410 (48%), Gaps = 50/410 (12%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRS---LYDIVPAENGDKFLSMLPPWHVYERA 82
D+ T +YTSGTTG PKGVML + NL HQ+++ + + D LS LP H++ERA
Sbjct: 179 DLFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDEAFTTLNVSQYDSSLSFLPLSHIFERA 238
Query: 83 CGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
++ RG Y N +++ L +P M +VP YE +Y+ + ++ + RR+
Sbjct: 239 WVAYVLHRGAVNCYLEDTNRVREALSEIRPTLMCAVPRFYEKIYTAVWDKVQKAPLFRRM 298
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
+ I + F+ I ++K+P I +L + LA+KL
Sbjct: 299 IFNWAIAV--GQKRFQFI--------SKKKP--------------IPFVLRQQYALADKL 334
Query: 202 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
V K++ +G + GG L +I LF+ +IG+ V++GYG+TE++ ++
Sbjct: 335 VLSKLRQLLGGRIRMMPCGGAKLEPNIGLFFHSIGINVKLGYGMTETTATVSCWEEGHFE 394
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
S+G + E+KI E NE+L VRG VM+GY+K P T + EDG+L
Sbjct: 395 PNSIGTLMPGAEVKI--GENNEIL---------VRGGMVMRGYYKKPQETADSFTEDGFL 443
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
TGD G P G L + R K+ + S G+ + P +E + I QI
Sbjct: 444 KTGDAGEFDPQ----------GNLYITDRIKELMKTSNGKYIAPQYIETKVGKDKFIEQI 493
Query: 381 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
VI ++ A+IVP + AK+L+I + D EL K I ++ +
Sbjct: 494 AVIADAKKYVSALIVPCFNSLEEYAKQLNIKYHDRLELIKHSDILQMFEQ 543
>gi|340794017|ref|YP_004759480.1| acyl-CoA synthetase [Corynebacterium variabile DSM 44702]
gi|340533927|gb|AEK36407.1| acyl-CoA synthetase [Corynebacterium variabile DSM 44702]
Length = 607
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 123/404 (30%), Positives = 198/404 (49%), Gaps = 53/404 (13%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP----AENGDKFLSMLPPWHVY 79
S D+A+ VYTSGTTG PKG L H N L + R+L P A G++ L+ LP HV
Sbjct: 182 SSDVASLVYTSGTTGRPKGCRLLHSNWLGEARALL-THPIGGIAVEGNRALTFLPLAHVL 240
Query: 80 ERACGYF-IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
RA + ++ + L + R QPH ++ VP V+E +++G++ +
Sbjct: 241 SRAVSLASTLGGATQSHWSEMATLVPEFARAQPHLILGVPRVFEKVHAGVKSKAVDGGGI 300
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
+ + + Y+ +G P A+L +
Sbjct: 301 GAKIFPLAEKTAVEYSKALDTKQG---------PG---------------ALLKAKRAVF 336
Query: 199 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+KLVY K+++A+G S + +SGG +L + F+ IGV++ GYG+TE++ IA
Sbjct: 337 DKLVYGKVRAAMGGSLQYCISGGSALNSELMHFFRGIGVRIYEGYGMTETTAAIAVNFEP 396
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
N++G+VG P+ ++I AE E+L ++G+ V GY+ N ATK D D
Sbjct: 397 DNIIGTVGKPVGGNTVRI--AEDGEIL---------MKGTVVFDGYWNNEEATKDTFDGD 445
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
G+L +GD+G + P G L + GR K+ IV + G+NV P LE+ + LI
Sbjct: 446 GFLRSGDLGALLPT----------GHLKITGRKKEIIVTAGGKNVSPGPLEDILRSAPLI 495
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSK 420
Q +V+G DQ+ G++I D++ + KR ++ H EL+K
Sbjct: 496 SQAMVVGDDQKFIGSLITLDEDALPAWKKRNNVPEHTGVLELAK 539
>gi|332291599|ref|YP_004430208.1| AMP-dependent synthetase and ligase [Krokinobacter sp. 4H-3-7-5]
gi|332169685|gb|AEE18940.1| AMP-dependent synthetase and ligase [Krokinobacter sp. 4H-3-7-5]
Length = 598
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 124/407 (30%), Positives = 198/407 (48%), Gaps = 51/407 (12%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+A+ +YTSGTTG PKGVM+ H N+ + + + + D LS LP H++ER+ +
Sbjct: 180 DLASIIYTSGTTGEPKGVMIGHANIGASLAAHKYELDISDQDVSLSFLPLSHIFERSWVF 239
Query: 86 FIFSRGIELMYTAV-RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
F GIE+ + + + + L+ +P M +VP ++E +Y+ IQ + ++ ++ +A
Sbjct: 240 FCLHMGIEVYFNQDPKKIAEVLKEVRPTVMCTVPRIFEKIYAAIQAKTKEATPTKQKLAS 299
Query: 145 -ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
AL Y +R+ + L N K + +A+K+V
Sbjct: 300 WALSVGDNYYNQHQRLEKKVPLGLNLK------------------------YKIADKIVL 335
Query: 204 KKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
K+++ G + GG+ P+ D+ F+ + G+ V+ GYGLTE++ ++ T
Sbjct: 336 SKLRALFGGRIKFMPCGGA-PLAADMVSFFHSFGLDVKCGYGLTETTATVSLFGYTNFEF 394
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
S G I TEIKI D +E+L V+G VMQGY+K P AT Q +DGW
Sbjct: 395 NSAGKSIEGTEIKIGD--NDEIL---------VKGPGVMQGYYKKPEATAQVF-KDGWFC 442
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD G + H G L + R KD + S G+ + P +LE A + SLI Q+
Sbjct: 443 TGDAGRLDEH----------GNLYITDRIKDLMKTSGGKYIAPQKLETALISDSLIEQLA 492
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
VIG Q+ A+ VP+ E + A +I EL K+ + L+
Sbjct: 493 VIGDQQKYVTALAVPNFENLKKYANEHNISFESMEELIKDNKVVALF 539
>gi|317474513|ref|ZP_07933787.1| AMP-binding enzyme [Bacteroides eggerthii 1_2_48FAA]
gi|316909194|gb|EFV30874.1| AMP-binding enzyme [Bacteroides eggerthii 1_2_48FAA]
Length = 601
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 133/444 (29%), Positives = 207/444 (46%), Gaps = 62/444 (13%)
Query: 23 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM--LPPWHVYE 80
+D+A +YTSGTTG PKGVML H N IR ++DI DK +SM LP HV+E
Sbjct: 178 SDEDLANILYTSGTTGEPKGVMLHHFNYREAIR-IHDIRLTAMTDKDVSMNFLPLTHVFE 236
Query: 81 RACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
+A Y RG+++ + +++ ++ +P M SVP +E +Y+G+Q++I + R
Sbjct: 237 KAWTYLCIHRGVQVCINLRPADIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKIAQETGLR 296
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL--- 196
+ + I++ + ID+L +L LHL
Sbjct: 297 KAMMLDAIKVGKMHN------------------------IDYLRVGKTPPLL--LHLKYK 330
Query: 197 LAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
EK +Y ++ IGI + G ++P I F ++G+ + VGYGLTES+ ++
Sbjct: 331 FYEKTIYALLKKTIGIENGNFFPTAGAAVPDEICEFVHSVGINMIVGYGLTESTATVSCF 390
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
+GSVG + E+KI E NE+L +RG + GY++ P AT A+
Sbjct: 391 PDKGYEIGSVGTLMPDVEVKI--GENNEIL---------LRGKTITTGYYRKPEATADAI 439
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
D+DGW +TGD G + H L L R KD S G+ V P LE
Sbjct: 440 DKDGWFHTGDAGHLKDGH-----------LYLTERIKDLFKTSNGKYVSPQALETKLAID 488
Query: 375 SLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW 434
I QI VI ++ A+IVP V AK + + D ++L + + L+ R
Sbjct: 489 RYIDQIAVIADQRKFVSALIVPVYGFVKDYAKEKGLEYKDMADLLQHPKVQALF-RARID 547
Query: 435 TSKCSF----QIGPIHVVDEPFTV 454
T + F Q+ ++ EPF++
Sbjct: 548 TLQQQFAHYEQVKRFTLLPEPFSM 571
>gi|386389632|ref|ZP_10074446.1| AMP-binding enzyme [Haemophilus paraphrohaemolyticus HK411]
gi|385695402|gb|EIG25964.1| AMP-binding enzyme [Haemophilus paraphrohaemolyticus HK411]
Length = 592
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 195/407 (47%), Gaps = 53/407 (13%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+ T +YTSGTTG+PKGVML + NL HQ++S + D LS LP H++ERA
Sbjct: 176 DDLFTLIYTSGTTGDPKGVMLDYANLAHQLQSHDQALNITEQDVSLSFLPLSHIFERAWV 235
Query: 85 YFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
+IF RG Y N ++ L +P M +VP YE +Y+ + ++ + RR +
Sbjct: 236 AYIFHRGATNCYLEDTNQIRQALVETKPTVMCAVPRFYEKIYAAVLDKVEKAPFIRRTL- 294
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL-WARIICAILWPLHLLAEKLV 202
+A A ++ Y+ +R WL W H A+KLV
Sbjct: 295 -----FHWAIQAGEKHYQSAIPSR-------------WLKWQ----------HKWADKLV 326
Query: 203 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
K+++ +G + GG L I F+ ++GV V++GYG+TE++ ++
Sbjct: 327 LSKLRALLGGQVRMMPCGGAKLEPTIGKFFHSLGVNVKLGYGMTETTATVSCWEDHGFNP 386
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
S+G + + E+KI E NE+L VRG VM+GY+K P T A DG+L
Sbjct: 387 NSIGKLMPNVEVKI--GENNEIL---------VRGGMVMRGYYKKPEETANAFTADGFLK 435
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD G + + G L + R K+ + S G+ + P +E + I QI
Sbjct: 436 TGDAGEMDEN----------GNLHITDRIKELMKTSNGKYIAPQYIEGKIGKDKFIEQIA 485
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
+I ++ A+IVP + + AK+L+I + D EL K I ++
Sbjct: 486 IIADAKKYVSALIVPCFDSLEEYAKQLNIKYQDRLELIKHSEIIQMF 532
>gi|238752418|ref|ZP_04613895.1| long-chain-fatty-acid--CoA ligase [Yersinia rohdei ATCC 43380]
gi|238709351|gb|EEQ01592.1| long-chain-fatty-acid--CoA ligase [Yersinia rohdei ATCC 43380]
Length = 599
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 198/415 (47%), Gaps = 47/415 (11%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+D+ T +YTSGTTG PKGVML ++N+ Q+ + D LS LP HV+ERA
Sbjct: 180 NDLFTLIYTSGTTGEPKGVMLDYRNMAAQLYLHDQRLTLTTDDISLSFLPLSHVFERAWS 239
Query: 85 YFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
+++ G + +Y + N ++ +Q QP M +VP YE ++S I ++ + R+ +
Sbjct: 240 FYVMHTGAQNVYISDTNWVRPAMQAVQPTVMCAVPRFYEKVFSAINDKVALAKWHRQKLF 299
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
R + FK + +G L+ +Q L+ LA +LV
Sbjct: 300 RWAV--GCGERKFKSVQDGQALSPLSEQ----------------------LYKLANRLVL 335
Query: 204 KKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K++ +G + + G L +I LF++AIG+ ++ GYG+TE+ ++ G
Sbjct: 336 SKLRGILGGKVRFLPAAGARLDDNIILFFQAIGINIKYGYGMTETCATVSCWEEKDFRFG 395
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G P+ E+++ G++ ++VRG VM+GYF P T ++ EDGWL T
Sbjct: 396 SIGKPLPGIEVRL-----------GAENEIQVRGPIVMRGYFNKPQETAESFTEDGWLKT 444
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD G + G L + R KD + S G+ + P +E + I Q+ +
Sbjct: 445 GDAGALDSQ----------GNLFITERLKDLMKTSGGKYIAPQMIEGTLGQDRFIEQVAI 494
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 437
I ++ A+IVP E + A+ +++ + D EL + I L+ + K K
Sbjct: 495 IADTRKFVSALIVPCFESLEEYARSINLKYHDRFELLRHSHIVSLFEQRLKDMQK 549
>gi|269955922|ref|YP_003325711.1| AMP-dependent synthetase and ligase [Xylanimonas cellulosilytica
DSM 15894]
gi|269304603|gb|ACZ30153.1| AMP-dependent synthetase and ligase [Xylanimonas cellulosilytica
DSM 15894]
Length = 606
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 121/378 (32%), Positives = 180/378 (47%), Gaps = 53/378 (14%)
Query: 27 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA---ENGDKFLSMLPPWHVYERAC 83
+AT +YTSG+TG PKG LTH N H + D++P G + L LP HV+ R
Sbjct: 184 LATIIYTSGSTGRPKGAELTHGNFAHVSLNAADVLPEVIDHEGARTLLFLPIAHVFARLI 243
Query: 84 GYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
S L + V+NL DL +QP ++++VP V+E +Y+ +++ S R++
Sbjct: 244 QVATLSANTVLGHAPDVKNLVADLGSFQPTFLLAVPRVFEKVYNSAEQKASASKLKRQIF 303
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
+ + G +R Q S + A L H LA+KLV
Sbjct: 304 -------------YWAVRTGIAASRAQDTGS-------------VPAALAFQHRLADKLV 337
Query: 203 YKKIQSAIGISKA-GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
K++ A+G VSGG L + F+ +GV V GYGLTE++ A P +
Sbjct: 338 LSKLREAMGGHVVHAVSGGAPLGERLGHFFRGVGVTVLEGYGLTETTAPAAVNLPRSVAI 397
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
G+VG P+ T IKI D G + ++G V +GY P T + L +DGW
Sbjct: 398 GTVGPPLPGTSIKIDD-----------DGEILIKGPHVFRGYRNQPELTAEVL-QDGWFR 445
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD+G + S+GR R + GR K+ IV + G+NV P LE+ L+ Q+V
Sbjct: 446 TGDLGTL---DSQGRLR-------ITGRKKEIIVTAGGKNVAPALLEDRLRSHPLVSQVV 495
Query: 382 VIGQDQRRPGAIIVPDKE 399
V+G + GA++ D E
Sbjct: 496 VVGDQRPFIGALVTLDAE 513
>gi|397671022|ref|YP_006512557.1| AMP-binding protein [Propionibacterium propionicum F0230a]
gi|395140893|gb|AFN45000.1| AMP-binding enzyme [Propionibacterium propionicum F0230a]
Length = 595
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 116/367 (31%), Positives = 178/367 (48%), Gaps = 48/367 (13%)
Query: 23 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERA 82
G DD+A+ +YTSGTTG+PKGVML H ++ Q ++ ++ D L LP H ERA
Sbjct: 168 GPDDLASIIYTSGTTGDPKGVMLRHSAMIAQKEAIEEMFHFGPEDHSLCFLPLSHALERA 227
Query: 83 CGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
I +G Y R + D L + +P ++SVP +YE +++ ++ S R +
Sbjct: 228 WTSIILLKGCMNTYVPDARTVADALVQTKPTLLVSVPKLYEKVFATAHAKVAASGIKRGI 287
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
AL R+ +R Y R ++P+ W W + +A++L
Sbjct: 288 FKWAL-RVG---ARNQRAY------RKGRRPA-------WFWRAQLG--------MADRL 322
Query: 202 VYKKIQSAIGISKAGVS-GGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
V I+ A+G +KA ++ GG L I+ F+ A+G+ + GYGLTE+SP++ P
Sbjct: 323 VLSSIRVALGGNKAVLACGGAPLRKEIEEFFSAVGMPIYTGYGLTEASPLVTFNSPGGFK 382
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
+G+ G + ++ I G G V RG VM GY+ N AT A+D DGWL
Sbjct: 383 IGTAGRVLKGGQLHI-----------GEHGEVLFRGPNVMAGYWNNEEATAAAIDSDGWL 431
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
+TGD G++ G LV+ R KD IV G+NV P +E L L
Sbjct: 432 HTGDAGYV----------DVDGFLVITDRIKDIIVTLGGKNVAPQPIEGLILADPLFEHA 481
Query: 381 VVIGQDQ 387
V++G ++
Sbjct: 482 VLLGDNR 488
>gi|377568695|ref|ZP_09797872.1| putative fatty-acid--CoA ligase [Gordonia terrae NBRC 100016]
gi|377534072|dbj|GAB43037.1| putative fatty-acid--CoA ligase [Gordonia terrae NBRC 100016]
Length = 609
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 127/421 (30%), Positives = 210/421 (49%), Gaps = 60/421 (14%)
Query: 9 TPVIAGKHY--KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENG 66
TP G + ++ + DD+AT +YTSGTTG PKGV +TH+N++ ++ +L +IV A
Sbjct: 160 TPAPEGFDFTASWQAVQPDDLATLIYTSGTTGPPKGVEITHRNIVAEMAALAEIVQAGFD 219
Query: 67 DKFLSMLPPWHVYERACGYFI-FSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETL 124
D+ +S LP H+ +R + RGI++ R + L P + VP V++ +
Sbjct: 220 DRAISYLPAAHIADRVSSHAANMMRGIQITTVPDPREIAAALPDVHPTFFFGVPRVWQKI 279
Query: 125 YSGIQKQIFTSSAARRVVARALIRISF---AYTAFKRIYEGFCLTRNQKQPSYLVALIDW 181
+GI+ ++ S+ V +AL +F A TA R+ EG K+ L
Sbjct: 280 RAGIEAKLAEESSP---VKKALAGWAFGVGASTAQARV-EG-------KKSGGLA----- 323
Query: 182 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGG--SLPMHIDLFYEAIGVKVQ 239
H LA++LV K+++A+G+ + +G G ++P + F+ +G+ V
Sbjct: 324 -------------HGLADRLVLHKVRTALGLDQVSFAGSGAAAIPPEVLKFFLGLGIPVL 370
Query: 240 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 299
+G++E++ V +G+VG P+ E+K+ D G + VRG V
Sbjct: 371 EVWGMSETTGVSTMTTSDNLRIGTVGTPVRGMEVKLAD-----------DGELLVRGPVV 419
Query: 300 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 359
M+GY K P T + +D DGWL+TGDI I G V +++ R K+ ++ +G
Sbjct: 420 MRGYRKQPDKTAETIDADGWLSTGDIATI---------DDDGNVTIVD-RKKELMINESG 469
Query: 360 ENVEPLELEEA-ALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 418
+N+ P +E A SSLI Q+ IG + A++V D + AK+L + AD +EL
Sbjct: 470 KNMSPTNIENAMKAASSLIGQVAAIGDARPYVSALVVLDPDAAAARAKKLDLSGADLTEL 529
Query: 419 S 419
S
Sbjct: 530 S 530
>gi|296129245|ref|YP_003636495.1| AMP-dependent synthetase and ligase [Cellulomonas flavigena DSM
20109]
gi|296021060|gb|ADG74296.1| AMP-dependent synthetase and ligase [Cellulomonas flavigena DSM
20109]
Length = 602
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 120/381 (31%), Positives = 190/381 (49%), Gaps = 55/381 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS----LYDIVPAENGDKFLSMLPPWHVYE 80
DD+AT +YTSGTTG PKGV LTH N + R+ L ++V ++ + L +P HV+
Sbjct: 180 DDLATVIYTSGTTGRPKGVELTHGNFVELCRNGAVGLAEVV-SKPTSRTLLFMPLAHVFA 238
Query: 81 RACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
R G + + RNL DL +QP Y+++VP V+E +Y+ +++ + +A R
Sbjct: 239 RFIQVLCVESGAVMGHAPDTRNLLPDLASFQPSYLLAVPRVFEKVYNSAEQKAGSGAALR 298
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ R +++ AY+ +G PS A L H LA+
Sbjct: 299 --IFRWAAKVAIAYSRALETPDG---------PS---------------AALRAQHRLAD 332
Query: 200 KLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
+LV++K+++ +G ++ VSGG L + FY IGV+V GYGLTE++ A RP
Sbjct: 333 RLVHRKLRAVLGGRAEFAVSGGAPLGERLGHFYRGIGVQVLEGYGLTETTAPTAVNRPGL 392
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
+G+VG P+ T +++ D + + + G V +GY P T + + DG
Sbjct: 393 TKIGTVGPPMPGTSVRVDDDDQ-----------IWIAGPHVFRGYRHMPEETAETV-VDG 440
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
W TGDIG + G L + GR+K+ IV + G+NV P LE+ L+
Sbjct: 441 WFRTGDIGTLDED----------GYLRITGRSKEIIVTAGGKNVAPAVLEDRLRGHPLVS 490
Query: 379 QIVVIGQDQRRPGAIIVPDKE 399
Q+VV+G + GA++ D E
Sbjct: 491 QVVVVGDQRPFIGALVTLDAE 511
>gi|227545849|ref|ZP_03975898.1| long-chain acyl-CoA synthetase (AMP-forming) [Bifidobacterium
longum subsp. longum ATCC 55813]
gi|227213965|gb|EEI81804.1| long-chain acyl-CoA synthetase (AMP-forming) [Bifidobacterium
longum subsp. infantis ATCC 55813]
Length = 607
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 137/470 (29%), Positives = 221/470 (47%), Gaps = 93/470 (19%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL----LHQIRSLYDIVPAENGDKFLSML 73
+ T+ +DD+AT VYTSG+TGNPKG LTHKN + ++L+++V ++ + L L
Sbjct: 175 RVATVRADDLATIVYTSGSTGNPKGAELTHKNFVSITISASQALHEVV-LDDHPRLLLFL 233
Query: 74 PPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLY------ 125
P H + R Y + G+ + L DL+ ++P Y++ VP V+E +Y
Sbjct: 234 PLAHCFARFIQYASIASDDGVVGYLPDTKTLLPDLRSFEPTYLLGVPRVFEKVYNAASHK 293
Query: 126 --SGIQKQIFTSSA-ARRVVAR---ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 179
+G + ++F SA A RV +R A + +FA A + YE
Sbjct: 294 AGAGWKGRLFVKSAEAARVWSRKEQAGEQHTFAEIAERAKYE------------------ 335
Query: 180 DWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVK 237
LVY+ ++ A+G V+ GG+ P+ +DL FY IG+
Sbjct: 336 --------------------TLVYRTVRGALGPKIKYVACGGA-PLSLDLAHFYNGIGLP 374
Query: 238 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 297
+ GYG+TE++ AA R T NV+G+VG P + I+I D +G ++V+G
Sbjct: 375 MIQGYGMTETAAPFAATRVTDNVIGTVGQPAPGSSIRISD-----------EGELQVKGP 423
Query: 298 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 357
V +GY P T +A DGWL TGD+ I G +V+ GR KD I+ +
Sbjct: 424 NVFRGYHNLPEKTAEAFTADGWLRTGDLAEIDDE----------GHIVITGRIKDIIITA 473
Query: 358 TGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL--MAAKRLSIVHADA 415
G+NV P+ LEE + ++ VV+G + GA++ D E + + A LS
Sbjct: 474 GGKNVSPIPLEEEIAKCPIVEHCVVVGDQRPFIGALVTLDPESLALWLPAHGLST----E 529
Query: 416 SELSKEKTISLLYGELRKWTSKCSFQIG------PIHVVDEPFTVNFLCL 459
+ + + T + + E++++ K + + V+D FT CL
Sbjct: 530 TPVDRLATNAAVREEIQQYVDKANATVSRAESVRKFAVLDTQFTQENKCL 579
>gi|443705653|gb|ELU02086.1| hypothetical protein CAPTEDRAFT_224649 [Capitella teleta]
Length = 649
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 132/409 (32%), Positives = 194/409 (47%), Gaps = 55/409 (13%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQI----RSLYDIVPAENGDKFLSMLPPWHVYE 80
D++AT YTSGTTGNPKGV LTH+ LL I S++ IV N D +S LP H++E
Sbjct: 221 DNLATICYTSGTTGNPKGVCLTHRALLSNIASVMMSIHPIVINSN-DSHISYLPLAHMFE 279
Query: 81 RACGYFIFSRGIELMYT--AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
R I G + ++ VR L +DLQ P +VP L + I ++ +
Sbjct: 280 RLVHLMIVQHGARIGFSRGDVRLLTEDLQALSPTIFPTVP----RLLNRIHDKVLMGVSG 335
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
++ + L ++F+ L R I +W
Sbjct: 336 SKIKS-MLFNLAFS--------RKMALLRQ---------------GVITNTSVW------ 365
Query: 199 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHI-DLFYEAIGVKVQVGYGLTESSPVIAARRP 256
+KLV+ K+Q +G + + G L H+ D A G V GYG TE++ ++ P
Sbjct: 366 DKLVFSKVQKLLGGRVRFCIVGSAPLAAHVLDFTRAAFGCLVTEGYGQTEATAGVSITLP 425
Query: 257 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 316
+ G VG P+ +K+VD + KG V VRG+ +M GY+K+P TK+A+DE
Sbjct: 426 HEYIPGQVGPPLPCNHVKLVDVPEMDYYAKDGKGEVCVRGTNLMSGYYKDPERTKEAIDE 485
Query: 317 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 376
DGW++TGD+G P G L + R K L+ GE + P ++E RSSL
Sbjct: 486 DGWVHTGDVGQWMPQ----------GTLKIIDRRKHIFKLAQGEYLAPEKVEGVYTRSSL 535
Query: 377 IRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 424
+ Q+ V G Q P AI+VPD E + AK+ + D EL + KT+
Sbjct: 536 VAQVFVDGNSLQSFPVAIVVPDPEVLPGWAKKQGL-SGDIQELCENKTV 583
>gi|410099275|ref|ZP_11294247.1| hypothetical protein HMPREF1076_03425 [Parabacteroides goldsteinii
CL02T12C30]
gi|409219297|gb|EKN12260.1| hypothetical protein HMPREF1076_03425 [Parabacteroides goldsteinii
CL02T12C30]
Length = 633
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 124/428 (28%), Positives = 217/428 (50%), Gaps = 51/428 (11%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
+++ +DD AT YTSGTT +PKGV+LTH+N + V ++ + L +LP H +
Sbjct: 172 QSLTNDDYATITYTSGTTADPKGVILTHRNYTANVEQSLTCVDIDDTWRTLVILPLDHCF 231
Query: 80 ERACGYFIFS-RG-----IELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQK 130
G++IF +G +++ T + LK+ +++ ++P+ ++SVP + + I++
Sbjct: 232 AHVVGFYIFMYKGASVATVQVGRTGMETLKNIPVNIKEFKPYLILSVPALAKNFKKNIEQ 291
Query: 131 QIFTSSAARRVVARAL-IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICA 189
I A +V R + ++ AYT W +
Sbjct: 292 GI---RAQGNMVNRLFHMGLNVAYTY--------------NGDGGDDKGRGWRF------ 328
Query: 190 ILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESS 248
+L P+ L + +++ K++ G K + GG L + FY AIG+ + GYGL+E++
Sbjct: 329 LLKPVVSLFDSIIFSKVRENFGSELKFFIGGGALLDKDLQKFYYAIGLPMYQGYGLSEAT 388
Query: 249 PVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPS 308
PVI+ P + GS G + ++KI D E E LP G KG + +RG VM GY+KNP+
Sbjct: 389 PVISTNGPRHHRFGSSGVLVQPLDLKICDQEGKE-LPLGEKGEIVIRGENVMAGYWKNPA 447
Query: 309 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 368
+T + + +DGWL TGD+G++ G+L + GR K ++ S GE P +E
Sbjct: 448 STTETI-KDGWLYTGDMGYMGKD----------GLLYVLGRFKSLLIGSDGEKYSPEGIE 496
Query: 369 EAALR-SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD-ASELSKEKTISL 426
EA + SS I Q+++ A++VP+K+ + + LS + D +E KE+ I +
Sbjct: 497 EALVEHSSCIDQLLLYNNQNPYTVALVVPNKDHL---KRHLSHLQLDLNTEKGKEEAIRI 553
Query: 427 LYGELRKW 434
+ ++ ++
Sbjct: 554 IQKQIDRF 561
>gi|339478658|gb|ABE95112.1| Long-chain-fatty-acid--CoA ligase [Bifidobacterium breve UCC2003]
Length = 607
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 128/455 (28%), Positives = 216/455 (47%), Gaps = 69/455 (15%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH----QIRSLYDIVPAENGDKFLSMLPPW 76
T+ ++D+AT VYTSG+TGNPKG LTHKN + ++L+++V ++ + L LP
Sbjct: 178 TVRTNDLATIVYTSGSTGNPKGAELTHKNFVSITIAASQALHEVV-LDDHPRLLLFLPLA 236
Query: 77 HVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 134
H + R Y + G+ T ++L DL+ ++P Y++ VP V+E +Y+ + T
Sbjct: 237 HCFARFIQYASIASDDGVVGYLTDTKSLLPDLRSFEPTYLLGVPRVFEKVYNAASHKAGT 296
Query: 135 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 194
R + A + ++ ++ E ++ Y
Sbjct: 297 GWKGRLFLKAA--EAARVWSRKEQSGEQHTFAEIAERAKY-------------------- 334
Query: 195 HLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGYGLTESSPVIA 252
E LVY+ ++ A+G V+ GG+ P+ +DL FY IG+ + GYG+TE++ A
Sbjct: 335 ----ETLVYRTVRGALGPKIKYVACGGA-PLSLDLAHFYNGIGLPMIQGYGMTETAAPFA 389
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
A R T NV+G+VG P + I+I D +G ++V+G V +GY P T +
Sbjct: 390 ATRVTDNVIGTVGQPAPGSSIRISD-----------EGELQVKGPNVFRGYHNLPEKTAE 438
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
A DGWL TGD+ I G +++ GR KD I+ + G+NV P+ LEE
Sbjct: 439 AFTADGWLRTGDLAEIDDE----------GRIIITGRIKDIIITAGGKNVSPIPLEEEIA 488
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEE--VLMAAKRLSIVHADASELSKEKTISLLYGE 430
+ ++ VV+G + GA++ D E + + A LS + + + T + + E
Sbjct: 489 KCPIVEHCVVVGDQRPFIGALVTLDPESLAIWLPAHGLST----ETPVDRLATNAAVREE 544
Query: 431 LRKWTSKCSFQIG------PIHVVDEPFTVNFLCL 459
++++ K + + V+D FT CL
Sbjct: 545 IQQYVDKANATVSRAESVRKFAVLDTQFTQENKCL 579
>gi|258648793|ref|ZP_05736262.1| putative long-chain-fatty-acid--CoA ligase [Prevotella tannerae
ATCC 51259]
gi|260851128|gb|EEX70997.1| putative long-chain-fatty-acid--CoA ligase [Prevotella tannerae
ATCC 51259]
Length = 609
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 195/404 (48%), Gaps = 49/404 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+A +YTSGTTGN KGV+LT+K + +P D FL+ LP H++ER
Sbjct: 181 DDMADILYTSGTTGNSKGVILTYKMYRGAVYGNGANLPLSPNDVFLNFLPFTHIFERGWS 240
Query: 85 YFIFSRGI-ELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
Y FS G+ + + ++ +Q +P M SVP ++E +Y G+Q++I S +R +
Sbjct: 241 YLGFSAGVCQAINERPADVLKSMQEIRPTCMSSVPRLWEKIYQGVQEKIAASPKMQRSLM 300
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
+ + Y + +QK+P+ ++ + + L ++ VY
Sbjct: 301 KDALETGMRY---------WGDYASQKRPAPMMLKMKYK--------------LYDRTVY 337
Query: 204 KKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA-RRPTCNV 260
K ++ +G+ +A + G ++ ++ F A+G+ + VGYGLTES+ ++ +
Sbjct: 338 KLLRKTLGLDRANFFPTAGAAVSPEVEKFAHAVGLYMMVGYGLTESTATVSNDHKNERAT 397
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
LGSVG + E+KI NE+L +RG + GY+K SATK LD DGW
Sbjct: 398 LGSVGRILPGLELKI--GANNEIL---------LRGDTITPGYYKKESATKAVLDADGWF 446
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
+TGD G++ G L L R KD S G+ + P ++E I Q
Sbjct: 447 HTGDAGYMK-----------DGELFLTERIKDLFKTSNGKYIAPQQIESKMTIDRYIDQC 495
Query: 381 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 424
VV+ +++ A+IVPD + + A + I A EL ++ I
Sbjct: 496 VVVANERKFVSALIVPDFQALEAYANQNGIAFASHEELCRKPEI 539
>gi|262192691|ref|ZP_06050831.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae CT 5369-93]
gi|262031430|gb|EEY50028.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae CT 5369-93]
Length = 601
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 130/435 (29%), Positives = 205/435 (47%), Gaps = 55/435 (12%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
E D+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+
Sbjct: 173 EQANYHDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVF 232
Query: 80 ERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ERA ++ +G Y V ++++ L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLV 292
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
R+V+ F + C + Q+QPS++ L H A
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------------LKQSHQFA 328
Query: 199 EKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 329 DKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDH 388
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
C S+G + ++KI E NE+L VRG VM+GY+K T ++ DE
Sbjct: 389 CFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLDKETAESFDEH 437
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
G+L TGD G I + G L + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 429
QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNELQK 547
Query: 430 ELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFRLLP 562
>gi|410895203|ref|XP_003961089.1| PREDICTED: long-chain-fatty-acid--CoA ligase 5-like isoform 1
[Takifugu rubripes]
Length = 683
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 132/445 (29%), Positives = 206/445 (46%), Gaps = 62/445 (13%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-----IVPAENGDKFLSMLPPWHVY 79
DD++ +TSGTTGNPKG MLTH+N++ + IVP+ D +S LP H++
Sbjct: 254 DDLSIICFTSGTTGNPKGAMLTHENVVSDAAGVLKGFETTIVPSTE-DVTISFLPLAHMF 312
Query: 80 ERACGYFIFSRG--IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
ER I+ G + +R L DD++ QP VP + +Y +Q
Sbjct: 313 ERVVQTVIYGAGGRVGFFQGDIRLLPDDMKTLQPTIFPVVPRLLNRVYDKVQ-------- 364
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
S A + FK+ F + R + + + LW
Sbjct: 365 ------------SGAKSPFKKWLLNFAVDRKYAEVKEGIVRNNSLW-------------- 398
Query: 198 AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI-GVKVQVGYGLTESSPVIAARR 255
+KL++ K+Q+++G + V+G + ++ F A+ G ++ GYG TE +
Sbjct: 399 -DKLIFNKVQASLGGRVRVMVTGAAPISPNVLTFLRAVLGCQIFEGYGQTECTAGCTFTM 457
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
P G VG P+ +K+VD E + +G V ++G V +GY K+P T +ALD
Sbjct: 458 PGDATAGHVGAPLPCNIVKLVDVEEMNYFASNGEGEVCIKGKNVFKGYLKDPEKTAEALD 517
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
+DGWL+TGDIG P GVL + R K+ L+ GE + P ++E +RS
Sbjct: 518 DDGWLHTGDIGKWLPS----------GVLKIIDRKKNIFKLAQGEYIAPEKIENVYVRSG 567
Query: 376 LIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK----EKTISLLYGE 430
L+ Q+ V G Q A+++PD E++ AK+L V EL K +K I +
Sbjct: 568 LVAQVFVHGDSLQSCLVAVVIPDPEDLPSFAKKLG-VQGSLKELCKNTEIKKAILSDMTK 626
Query: 431 LRKWTSKCSF-QIGPIHVVDEPFTV 454
L K SF Q+ I++ E FT+
Sbjct: 627 LGKEAGLKSFEQVKDIYLHPEQFTI 651
>gi|293189663|ref|ZP_06608380.1| putative CoA ligase [Actinomyces odontolyticus F0309]
gi|292821401|gb|EFF80343.1| putative CoA ligase [Actinomyces odontolyticus F0309]
Length = 627
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 121/387 (31%), Positives = 184/387 (47%), Gaps = 53/387 (13%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP---AENGDKFLSMLP 74
+ + + DDIAT VYTSGTTG PKG +L+H+N + + + +P A + L LP
Sbjct: 197 RADALTKDDIATIVYTSGTTGTPKGTVLSHENFTNLCLNAHAWMPEIAAGKDSRLLLFLP 256
Query: 75 PWHVYERACGYF-IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 133
HV+ R F I G+ + ++NL +DL ++P Y++ VP V E +Y+ +
Sbjct: 257 LAHVFARFLQVFQISGNGVLGHASNIKNLLNDLASFKPSYLLVVPRVLEKIYNSADTK-- 314
Query: 134 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
+S +R + R +++ AY+ EG PS A L
Sbjct: 315 -ASGPKRKIFRWAAKVAIAYSRALDTEEG---------PS---------------ASLKA 349
Query: 194 LHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
H LA++LVY++I + G + VSGG L + FY +G+ V GYGLTE+ ++
Sbjct: 350 QHALADRLVYQQIIRLVGGNADYIVSGGAPLATWLAHFYRGVGIPVLEGYGLTETVGPVS 409
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
P + +G+VG + KI D +G + ++G V Q Y +P AT
Sbjct: 410 VNTPRLSKIGTVGPALPPMSFKISD-----------EGEILLKGPSVFQRYHNDPGATAA 458
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
EDGW TGD+G S G + + GRAK+ IV + G+NV P LE
Sbjct: 459 CFTEDGWFRTGDLG----------SLDRDGYVSITGRAKEIIVTAGGKNVAPAALENPMR 508
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKE 399
LI Q++V+G + A+I D E
Sbjct: 509 SHPLISQVLVVGDQRPFVAALITLDAE 535
>gi|212715288|ref|ZP_03323416.1| hypothetical protein BIFCAT_00180 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|212661745|gb|EEB22320.1| hypothetical protein BIFCAT_00180 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
Length = 607
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 123/456 (26%), Positives = 219/456 (48%), Gaps = 65/456 (14%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS----LYDIVPAENGDKFLSML 73
+ +++ +DD+AT VYTSG+TG PKG L+H+N + R+ L++I+ E+ + L L
Sbjct: 175 RIDSVHADDLATIVYTSGSTGAPKGAELSHRNFISITRAGSLALHEII-LEDHPRLLLFL 233
Query: 74 PPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P H + R Y + G+ + L DL+ ++P Y++ VP V+E +Y+ ++
Sbjct: 234 PLAHCFARFIQYASIASDDGVVGYLPDTKTLLPDLRSFEPTYLLGVPRVFEKVYNAASRK 293
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
R + A + ++ ++ E + + + SY
Sbjct: 294 AGMGWKGRLFLKAA--EAARDWSHMQQAGEKPTMKQTAEHLSY----------------- 334
Query: 192 WPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGYGLTESSP 249
E VY+ ++ A+G V+ GG+ P+ + L F+ IG+ + GYG+TE++
Sbjct: 335 -------EASVYRTVRGALGPRIRYVACGGA-PLDVSLAHFFNGIGLPMIQGYGMTETAA 386
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
AA R T NV+G+VG P + ++I D G ++V+G V +GY P
Sbjct: 387 PFAANRVTDNVIGTVGQPAPGSSVRISD-----------DGELQVKGPNVFRGYHNLPEK 435
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T +A EDGWL TGD+ I G + + GR KD I+ + G+NV P+ +E+
Sbjct: 436 TAEAFTEDGWLKTGDLASIDDE----------GRITITGRKKDIIITAGGKNVSPIPMEQ 485
Query: 370 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYG 429
++ ++ VV+G ++ GA++ D E +AA S+ + + L + T++ ++
Sbjct: 486 EIVKCPIVEHAVVVGDNRPFIGALVTLDLEG--LAAWLPSVGLSADTPLDRIATVAAVHD 543
Query: 430 ELRKWTSKCSFQIGPIH------VVDEPFTVNFLCL 459
E++K+ K + + V+D FT CL
Sbjct: 544 EIQKYVDKANATVSRAESVRKFVVLDTQFTQENKCL 579
>gi|350530149|ref|ZP_08909090.1| hypothetical protein VrotD_03450 [Vibrio rotiferianus DAT722]
Length = 602
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 207/437 (47%), Gaps = 55/437 (12%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ E D+ T +YTSGTTG PKGVML + N+ Q+ + + D L LP H
Sbjct: 171 RLEQAQEADLLTLIYTSGTTGQPKGVMLDYANISAQLEGHDERLSLTEDDVSLCFLPLSH 230
Query: 78 VYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ERA +++ +G Y ++D L +P M +VP YE ++S I +++ +
Sbjct: 231 VFERAWTFYVLYKGGTNCYLQDTMQVRDALSEVRPTVMSAVPRFYEKIFSAIHEKVSRAP 290
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
R+++ + + A C + +++PS + L +
Sbjct: 291 FHRKIMFTWAVNMGAKMAA--------C-HQEKRKPSLM---------------LRKSYA 326
Query: 197 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 327 LADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWD 386
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
C S+G + ++KI E NE+L VRG VM+GY+K T++ D
Sbjct: 387 DQCFDPSSIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMLEETEKTFD 435
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
E G+L TGD G+I + G L + R K+ + S G+ + P +E A +
Sbjct: 436 EHGFLKTGDAGYIDEN----------GNLFITDRIKELMKTSNGKYIAPQVVEGAIGKDH 485
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLL 427
I QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 486 FIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIAYHDRVELIKHHQIVEMLEKRVNDL 545
Query: 428 YGELRKWTSKCSFQIGP 444
EL K+ F++ P
Sbjct: 546 QKELAKFEQVKKFKLLP 562
>gi|154509322|ref|ZP_02044964.1| hypothetical protein ACTODO_01847 [Actinomyces odontolyticus ATCC
17982]
gi|153798956|gb|EDN81376.1| AMP-binding enzyme [Actinomyces odontolyticus ATCC 17982]
Length = 627
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 121/387 (31%), Positives = 184/387 (47%), Gaps = 53/387 (13%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP---AENGDKFLSMLP 74
+ + + DDIAT VYTSGTTG PKG +L+H+N + + + +P A + L LP
Sbjct: 197 RADALTKDDIATIVYTSGTTGTPKGTVLSHENFTNLCLNAHAWMPEIAAGKDSRLLLFLP 256
Query: 75 PWHVYERACGYF-IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 133
HV+ R F I G+ + ++NL +DL ++P Y++ VP V E +Y+ +
Sbjct: 257 LAHVFARFLQVFQISGNGVLGHASNIKNLLNDLASFKPSYLLVVPRVLEKIYNSADTK-- 314
Query: 134 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
+S +R + R +++ AY+ EG PS A L
Sbjct: 315 -ASGPKRKIFRWAAKVAIAYSRALDTDEG---------PS---------------ASLKA 349
Query: 194 LHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
H LA++LVY++I + G + VSGG L + FY +G+ V GYGLTE+ ++
Sbjct: 350 QHALADRLVYQQIIRLVGGNADYIVSGGAPLATWLAHFYRGVGIPVLEGYGLTETVGPVS 409
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
P + +G+VG + KI D +G + ++G V Q Y +P AT
Sbjct: 410 VNTPRLSKIGTVGPALPPMSFKISD-----------QGEILLKGPSVFQRYHNDPGATAA 458
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
EDGW TGD+G S G + + GRAK+ IV + G+NV P LE
Sbjct: 459 CFTEDGWFRTGDLG----------SLDRDGYVSITGRAKEIIVTAGGKNVAPAALENPMR 508
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKE 399
LI Q++V+G + A+I D E
Sbjct: 509 SHPLISQVLVVGDQRPFVAALITLDAE 535
>gi|416052822|ref|ZP_11578457.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans serotype e str.
SC1083]
gi|347991614|gb|EGY33077.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans serotype e str.
SC1083]
Length = 595
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 202/430 (46%), Gaps = 55/430 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+D+ T +YTSGTTG PKGVML + NL HQ+++ + ++ D LS LP H++ERA
Sbjct: 177 EDLFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDQALQVDDTDVSLSFLPLSHIFERAWV 236
Query: 85 YFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
++ RG Y N ++ L +P M +VP YE +Y+ I ++ + R+ +
Sbjct: 237 AYVLHRGATNCYIEDTNQVRAALMEIRPTLMCAVPRFYEKIYAAILDKVHNAPKLRQWI- 295
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
++A ++ ++ L + QK I +L H LA+KLV
Sbjct: 296 -----FNWAIAVGRKHFDA--LAKQQK----------------IGFLLKQQHALADKLVL 332
Query: 204 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K+++ +G + GG L I LF+ +IG+ +++GYG+TE++ ++
Sbjct: 333 GKLRALLGGRIRMMPCGGAKLEPTIGLFFHSIGLNIKLGYGMTETTATVSCWNDFNFNAN 392
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G + E+KI E NE+L VRG VM+GY+K P T DG+L T
Sbjct: 393 SIGTLMPGAEVKI--GENNEIL---------VRGGMVMKGYYKKPQETADTFTTDGFLKT 441
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD G G L + R K+ + + G+ + P LE + I QI V
Sbjct: 442 GDAG----------EFDADGNLYITDRIKELMKTANGKYIAPQVLESKIGKDKFIEQIAV 491
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 434
I ++ A+IVP + AK+++I + D EL + E+ I+ L EL W
Sbjct: 492 IADAKKYVSALIVPCYAALEDYAKQVNIKYQDRLELLRNSEIIQMLERRINELQKELAGW 551
Query: 435 TSKCSFQIGP 444
F + P
Sbjct: 552 EQIKRFTLLP 561
>gi|343494337|ref|ZP_08732599.1| putative long-chain-fatty-acid-CoA ligase [Vibrio nigripulchritudo
ATCC 27043]
gi|342825242|gb|EGU59741.1| putative long-chain-fatty-acid-CoA ligase [Vibrio nigripulchritudo
ATCC 27043]
Length = 602
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 132/442 (29%), Positives = 205/442 (46%), Gaps = 65/442 (14%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ E + DD+ T +YTSGTTG PKGVMLT+ N+ Q+ + N D L LP H
Sbjct: 171 RLEEVELDDLLTLIYTSGTTGQPKGVMLTYANIASQLEGHDRRLGLTNQDVSLCFLPLSH 230
Query: 78 VYERACGYFIFSRGIELMYTAVRNLKDDLQ------RYQPHYMISVPLVYETLYSGIQKQ 131
V+ERA +++ +G Y LKD +Q +P M +VP YE ++S I ++
Sbjct: 231 VFERAWTFYVLYKGATNCY-----LKDTMQVREALGDIRPTVMCAVPRFYEKIFSAIHEK 285
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
+ + R+++ ++A ++ E R +PS++ L
Sbjct: 286 VSKAPFIRKIL------FTWAVNMGAKMAE---CKRTNSRPSFM---------------L 321
Query: 192 WPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
H LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++
Sbjct: 322 QRCHKLADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTAT 381
Query: 251 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSAT 310
I+ S+G + ++KI E NE+L VRG VM+GY+K P T
Sbjct: 382 ISCWDDGTFNPDSIGTSMPGAQVKI--GENNEIL---------VRGPMVMKGYYKLPEET 430
Query: 311 KQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA 370
+ DE G+L TGD G G L + R K+ + S G+ + P +E A
Sbjct: 431 AKTFDEHGFLKTGDAGKFDDQ----------GNLFITDRIKELMKTSGGKYIAPQMIEGA 480
Query: 371 ALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EK 422
+ I QI VI ++ A+IVP + + AK L+I + D +L K E
Sbjct: 481 IGKDHFIEQIAVIADTRKFVSALIVPCFDALEEHAKELNIKYHDRMDLIKHSQVVEMFES 540
Query: 423 TISLLYGELRKWTSKCSFQIGP 444
+ L EL K+ F + P
Sbjct: 541 RLEGLQKELAKFEQVKKFTLLP 562
>gi|336320550|ref|YP_004600518.1| AMP-dependent synthetase/ligase [[Cellvibrio] gilvus ATCC 13127]
gi|336104131|gb|AEI11950.1| AMP-dependent synthetase and ligase [[Cellvibrio] gilvus ATCC
13127]
Length = 605
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 191/381 (50%), Gaps = 55/381 (14%)
Query: 27 IATYVYTSGTTGNPKGVMLTHKNL----LHQIRSLYDIVPAENGDKFLSMLPPWHVYERA 82
+AT +YTSGTTG PKGV LTH N ++ + L ++V +E G + L +P HV+ R
Sbjct: 182 VATVIYTSGTTGRPKGVELTHGNFYELTVNAVEGLREVV-SEPGSRTLLFMPLAHVFARF 240
Query: 83 CGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
G L ++ R L DDL ++P ++++VP V+E +Y+G +++ ++ +
Sbjct: 241 IHVLCMPAGAVLGHSPDTRTLLDDLASFRPTFILAVPRVFEKVYNGAEQK--AAAGGKGS 298
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
+ + + S Y+ G PS W R+ H +A+ L
Sbjct: 299 IFQRAAKTSIVYSRALDTPRG---------PSP--------WLRL-------QHKVADVL 334
Query: 202 VYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
V ++++ + G +K +SGG L + FY +G+KV GYGLTE++ RP
Sbjct: 335 VLHRLRALLGGQAKWAISGGAPLGERLGHFYRGVGLKVLEGYGLTETTAPATVNRPARTK 394
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
+G+VG P+ T ++I D G ++++G QV QGY N +AT++++ DGW
Sbjct: 395 IGTVGKPLPGTAVRIAD-----------DGEIEIKGIQVFQGYHNNDAATQESM-HDGWF 442
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
TGD+G + G L + GR K+ IV + G+NV P LE+ LI Q+
Sbjct: 443 RTGDLGSLDDE----------GYLRITGRKKEIIVTAGGKNVAPAVLEDRLRGHPLISQV 492
Query: 381 VVIGQDQRRPGAIIVPDKEEV 401
VV+G + GA++ D E V
Sbjct: 493 VVVGDQRPFIGALVTLDPEGV 513
>gi|322690540|ref|YP_004220110.1| long-chain-fatty acid CoA ligase [Bifidobacterium longum subsp.
longum JCM 1217]
gi|320455396|dbj|BAJ66018.1| putative long-chain-fatty acid CoA ligase [Bifidobacterium longum
subsp. longum JCM 1217]
Length = 607
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 214/458 (46%), Gaps = 69/458 (15%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL----LHQIRSLYDIVPAENGDKFLSML 73
+ T+ +DD+AT VYTSG+TGNPKG LTHKN + ++L+++V ++ + L L
Sbjct: 175 RVATVRADDLATIVYTSGSTGNPKGAELTHKNFVSITISASQALHEVV-LDDHPRLLLFL 233
Query: 74 PPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P H + R Y + G+ + L DL+ ++P Y++ VP V+E +Y+ +
Sbjct: 234 PLAHCFARFIQYASIASDDGVVGYLPDTKTLLPDLRSFEPTYLLGVPRVFEKVYNAASHK 293
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
R V A + ++ ++ E ++ Y
Sbjct: 294 AGAGWKGRLFVKAA--EAARVWSRKEQAGEQHTFAEIAERAKY----------------- 334
Query: 192 WPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGYGLTESSP 249
E LVY+ ++ A+G V+ GG+ P+ +DL FY IG+ + GYG+TE++
Sbjct: 335 -------ETLVYRTVRGALGPKIKYVACGGA-PLSLDLAHFYNGIGLPMIQGYGMTETAA 386
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
AA R T NV+G+VG P + I+I D +G ++V+G V +GY P
Sbjct: 387 PFAATRVTDNVIGTVGQPAPGSSIRISD-----------EGELQVKGPNVFRGYHNLPEK 435
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T +A DGWL TGD+ I G +V+ GR KD I+ + G+NV P+ LEE
Sbjct: 436 TAEAFTADGWLRTGDLAEIDDE----------GHIVITGRIKDIIITAGGKNVSPIPLEE 485
Query: 370 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL--MAAKRLSIVHADASELSKEKTISLL 427
+ ++ VV+G + GA++ D E + + A LS + + + T + +
Sbjct: 486 EIAKCPIVEHCVVVGDQRPFIGALVTLDPESLALWLPAHGLST----ETPVDRLATNAAV 541
Query: 428 YGELRKWTSKCSFQIG------PIHVVDEPFTVNFLCL 459
E++++ K + + V+D FT CL
Sbjct: 542 REEIQQYVDKANATVSRAESVRKFAVLDTQFTQENKCL 579
>gi|296166052|ref|ZP_06848500.1| possible long-chain-fatty-acid--CoA ligase [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295898591|gb|EFG78149.1| possible long-chain-fatty-acid--CoA ligase [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length = 600
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 184/386 (47%), Gaps = 53/386 (13%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDKFLSMLPP 75
+ E + +DD AT +YTSGTTG PKG LTH NLL++ R + +P + G + L LP
Sbjct: 174 RQEGLRADDPATLIYTSGTTGRPKGCQLTHSNLLYETRGAKECLPTLLDEGQRLLIFLPL 233
Query: 76 WHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 134
HV R+ F+ + + +T+ ++NL ++P ++SVP V+E +Y+ ++
Sbjct: 234 AHVLARSLTLSAFANKVTVGFTSDIKNLLPMFAVFKPTVVVSVPRVFEKVYNTAEQNAVN 293
Query: 135 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 194
R A + ++ +++ +P L L
Sbjct: 294 DGKGRIFAAAVQAAVDWSQ------------AQDRGRPGPL---------------LRAK 326
Query: 195 HLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 253
H L ++LVY K+++A+G A VSGG L + FY +G+ + GYGLTE+S I
Sbjct: 327 HALFDRLVYHKLRAALGGECHASVSGGAPLGARLGHFYRGVGLTIHEGYGLTETSSAITV 386
Query: 254 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 313
+ +G+VG + ++I D G + VRG V GY++N AT+ A
Sbjct: 387 NQVGNVRIGTVGTLLPGNSMRIAD-----------DGELLVRGGVVFSGYWRNEQATRDA 435
Query: 314 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 373
DGW TGD+G + G L + GR K+ IV + G+NV P LE+
Sbjct: 436 F-TDGWFKTGDLGALDED----------GFLKITGRKKEIIVTAGGKNVAPAVLEDQLRA 484
Query: 374 SSLIRQIVVIGQDQRRPGAIIVPDKE 399
+LI Q +V+G + GA+I D E
Sbjct: 485 HALISQAMVVGDAKPFIGALITIDPE 510
>gi|312881741|ref|ZP_07741518.1| long-chain acyl-CoA synthetase [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309370631|gb|EFP98106.1| long-chain acyl-CoA synthetase [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 600
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 132/450 (29%), Positives = 207/450 (46%), Gaps = 62/450 (13%)
Query: 5 LPILTPVIAGKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE 64
LP+L ++ ++ DD+ T +YTSGTTG PKGVML + N+ Q+ +
Sbjct: 165 LPLLEQRLSDANF-------DDLLTLIYTSGTTGKPKGVMLDYANVAAQLDGHNQRLSLT 217
Query: 65 NGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYET 123
D L LP HV+ERA +++ +G Y +K L +P M +VP YE
Sbjct: 218 QDDVSLCFLPLSHVFERAWSFYVLYKGATNCYLQDTSAIKQALVEVRPTVMCAVPRFYEK 277
Query: 124 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 183
++S I +++ + R+++ F + C + K PS L
Sbjct: 278 IFSAIHEKVAKAPLVRKII--------FTWAVNMGAKLAHC-QQTGKTPSLL-------- 320
Query: 184 ARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGY 242
L H LA+ +V K++S +G + + GG L I F+ AIG+ V++GY
Sbjct: 321 -------LKKSHQLADSMVLSKLRSLVGGNINFMPCGGAKLDETIGRFFHAIGINVKLGY 373
Query: 243 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 302
G+TE+ I+ C S+G P+ E+KI NE+L VRG VM+G
Sbjct: 374 GMTETVATISCWDDGCFNPDSIGLPMPGAEVKI--GPNNEIL---------VRGPMVMRG 422
Query: 303 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 362
Y+K T++ D++G+L TGD G+I G + + R K+ + S G+ +
Sbjct: 423 YYKLAEETQKTFDDEGFLKTGDAGYIDDK----------GNVFITDRIKELMKTSGGKYI 472
Query: 363 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK-- 420
P +E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 473 APQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDALEDYAKDLNIKYHDKVELIKNN 532
Query: 421 ------EKTISLLYGELRKWTSKCSFQIGP 444
EK + L EL K+ F++ P
Sbjct: 533 QIIEMLEKRVENLQKELAKFEQIKRFKLLP 562
>gi|209696156|ref|YP_002264086.1| AMP-binding protein [Aliivibrio salmonicida LFI1238]
gi|208010109|emb|CAQ80434.1| putative AMP-binding enzyme [Aliivibrio salmonicida LFI1238]
Length = 611
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 129/436 (29%), Positives = 202/436 (46%), Gaps = 55/436 (12%)
Query: 17 YKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPW 76
++ +T DD+ T +YTSGTTG PKGVML + N+ Q+ + D L LP
Sbjct: 178 HRLDTAEMDDLLTLIYTSGTTGEPKGVMLDYTNIGSQLEGHNTNLALTEKDVSLCFLPLS 237
Query: 77 HVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 135
HV+ERA +++ +G Y NL KD L +P M +VP YE ++S + +++ +
Sbjct: 238 HVFERAWTFYVLYKGAINCYLPNTNLIKDALIEVKPTVMCAVPRFYEKIFSTVHEKVSRA 297
Query: 136 SAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLH 195
A R+V+ + + +A K + ++PS+ IL H
Sbjct: 298 PAHRKVMFTWAVNMGAKMSACK---------QEAREPSW---------------ILKQSH 333
Query: 196 LLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
+A+KLV K++ +G + + GG L I F+ A+GV V++GYG+TE++ I+
Sbjct: 334 KIADKLVLSKLRMILGGNINFMPCGGAKLDATIGRFFHALGVNVKLGYGMTETTATISCW 393
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
S+G + E+KI G K + VRG VM+GY+ P T
Sbjct: 394 EDGKFHPDSIGTLMPGAEVKI-----------GKKNEILVRGPMVMKGYYNKPEETALTF 442
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
EDG+L TGD G G L + R K+ + S G+ + P +E A +
Sbjct: 443 TEDGFLKTGDAGEF----------DADGNLYITDRIKELMKTSGGKYIAPQVIEGAIGKD 492
Query: 375 SLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISL 426
I QI VI ++ A+IVP + + AK L+I + D EL K EK ++
Sbjct: 493 HFIEQIAVIADTRKFVSALIVPCYDALEEYAKELNIAYHDRMELVKNSEIVEMLEKRVAN 552
Query: 427 LYGELRKWTSKCSFQI 442
L EL ++ F +
Sbjct: 553 LQKELARFEQVKKFTL 568
>gi|384202115|ref|YP_005587862.1| long-chain-fatty acid CoA ligase [Bifidobacterium longum subsp.
longum KACC 91563]
gi|338755122|gb|AEI98111.1| long-chain-fatty acid CoA ligase [Bifidobacterium longum subsp.
longum KACC 91563]
Length = 607
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 214/458 (46%), Gaps = 69/458 (15%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL----LHQIRSLYDIVPAENGDKFLSML 73
+ T+ +DD+AT VYTSG+TGNPKG LTHKN + ++L+++V ++ + L L
Sbjct: 175 RVATVRADDLATIVYTSGSTGNPKGAELTHKNFVSITISASQALHEVV-LDDHPRLLLFL 233
Query: 74 PPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P H + R Y + G+ + L DL+ ++P Y++ VP V+E +Y+ +
Sbjct: 234 PLAHCFARFIQYASIASDDGVVGYLPDTKTLLPDLRSFEPTYLLGVPRVFEKVYNAASHK 293
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
R V A + ++ ++ E ++ Y
Sbjct: 294 AGAGWKGRLFVKAA--EAARVWSRKEQAGEQHTFAEIAERAKY----------------- 334
Query: 192 WPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGYGLTESSP 249
E LVY+ ++ A+G V+ GG+ P+ +DL FY IG+ + GYG+TE++
Sbjct: 335 -------ETLVYRTVRGALGPKIKYVACGGA-PLSLDLAHFYNGIGLPMIQGYGMTETAA 386
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
AA R T NV+G+VG P + I+I D +G ++V+G V +GY P
Sbjct: 387 PFAATRVTDNVIGTVGQPAPGSSIRISD-----------EGELQVKGPNVFRGYHNLPEK 435
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T +A DGWL TGD+ I G +V+ GR KD I+ + G+NV P+ LEE
Sbjct: 436 TAEAFTADGWLRTGDLAEIDDE----------GHIVITGRIKDIIITAGGKNVSPIPLEE 485
Query: 370 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL--MAAKRLSIVHADASELSKEKTISLL 427
+ ++ VV+G + GA++ D E + + A LS + + + T + +
Sbjct: 486 EIAKCPIVEHCVVVGDQRPFIGALVTLDPESLALWLPAHGLST----ETPVDRLATNAAV 541
Query: 428 YGELRKWTSKCSFQIG------PIHVVDEPFTVNFLCL 459
E++++ K + + V+D FT CL
Sbjct: 542 REEIQQYVDKANATVSRAESVRKFAVLDTQFTQENKCL 579
>gi|422336959|ref|ZP_16417931.1| long-chain-fatty-acid-CoA ligase [Aggregatibacter aphrophilus
F0387]
gi|353345511|gb|EHB89802.1| long-chain-fatty-acid-CoA ligase [Aggregatibacter aphrophilus
F0387]
Length = 595
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 200/430 (46%), Gaps = 55/430 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+D+ T +YTSGTTG PKGVML + NL HQ+++ + ++ D LS LP H++ERA
Sbjct: 177 EDLFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDQALKVDDSDVSLSFLPLSHIFERAWV 236
Query: 85 YFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
++ RG Y N ++ L +P M +VP YE +Y+ I ++ + R+ +
Sbjct: 237 AYVLHRGAANCYIEDTNQVRSALTEIRPTLMCAVPRFYEKIYTAILDKVHNAPKLRQWIF 296
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
+ I + L + QK I +L + LA KLV
Sbjct: 297 HWAMAIGHQHFD--------ALAKGQK----------------IGFLLKQQYSLANKLVL 332
Query: 204 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K+++ +G + GG L I LF+ +IG+ +++GYG+TE++ ++
Sbjct: 333 GKLRALLGGRIRMMPCGGAKLEPTIGLFFHSIGLNIKLGYGMTETTATVSCWDDVNFNAN 392
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G + E+KI E NE+L VRG VM+GY+K P T +A DG+L T
Sbjct: 393 SIGSLMPGAEVKI--GENNEIL---------VRGGMVMKGYYKKPQETAEAFTADGFLKT 441
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD G + + L + R K+ + S G+ + P LE + I QI V
Sbjct: 442 GDAGEFDANSN----------LYITDRIKELMKTSNGKYIAPQVLESKIGKDKFIEQIAV 491
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 434
I ++ A+IVP + AK+++I + D EL K E+ I+ L EL W
Sbjct: 492 IADAKKYVSALIVPCYTALEEYAKQVNIKYQDRLELLKNSEIIQMLERRINDLQKELAGW 551
Query: 435 TSKCSFQIGP 444
F + P
Sbjct: 552 EQIKRFTLLP 561
>gi|23335867|ref|ZP_00121099.1| COG1022: Long-chain acyl-CoA synthetases (AMP-forming)
[Bifidobacterium longum DJO10A]
gi|189439874|ref|YP_001954955.1| long-chain acyl-CoA synthetase [Bifidobacterium longum DJO10A]
gi|189428309|gb|ACD98457.1| Long-chain acyl-CoA synthetase [Bifidobacterium longum DJO10A]
Length = 607
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 215/458 (46%), Gaps = 69/458 (15%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH----QIRSLYDIVPAENGDKFLSML 73
+ T+ +DD+AT VYTSG+TGNPKG LTHKN + ++L+++V ++ + L L
Sbjct: 175 RVATVRADDLATIVYTSGSTGNPKGAELTHKNFVSITITASQALHEVV-LDDHPRLLLFL 233
Query: 74 PPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P H + R Y + G+ ++L DL+ ++P Y++ VP V+E +Y+ +
Sbjct: 234 PLAHCFARFIQYASIASDDGVVGYLPDTKSLLPDLRSFEPTYLLGVPRVFEKVYNAASHK 293
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
R V A + ++ ++ E ++ Y
Sbjct: 294 AGAGWKGRLFVKAA--EAARVWSRKEQAGEQHTFAEIAERAKY----------------- 334
Query: 192 WPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGYGLTESSP 249
E LVY+ ++ A+G V+ GG+ P+ +DL FY IG+ + GYG+TE++
Sbjct: 335 -------ETLVYRTVRGALGPKIKYVACGGA-PLSLDLAHFYNGIGLPMIQGYGMTETAA 386
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
AA R T NV+G+VG P + I+I D +G ++V+G V +GY P
Sbjct: 387 PFAATRVTDNVIGTVGQPAPGSSIRISD-----------EGELQVKGPNVFRGYHNLPEK 435
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T +A DGWL TGD+ I G +V+ GR KD I+ + G+NV P+ LEE
Sbjct: 436 TAEAFTADGWLRTGDLAEIDDE----------GHIVITGRIKDIIITAGGKNVSPIPLEE 485
Query: 370 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL--MAAKRLSIVHADASELSKEKTISLL 427
+ ++ VV+G + GA++ D E + + A LS + + + T + +
Sbjct: 486 EIAKCPIVEHCVVVGDQRPFIGALVTLDPESLALWLPAHGLST----ETPVDRLATNAAV 541
Query: 428 YGELRKWTSKCSFQIG------PIHVVDEPFTVNFLCL 459
E++++ K + + V+D FT CL
Sbjct: 542 REEIQQYVDKANATVSRAESVRKFAVLDTQFTQENKCL 579
>gi|322834433|ref|YP_004214460.1| AMP-dependent synthetase/ligase [Rahnella sp. Y9602]
gi|384259655|ref|YP_005403589.1| AMP-dependent synthetase/ligase [Rahnella aquatilis HX2]
gi|321169634|gb|ADW75333.1| AMP-dependent synthetase and ligase [Rahnella sp. Y9602]
gi|380755631|gb|AFE60022.1| AMP-dependent synthetase/ligase [Rahnella aquatilis HX2]
Length = 598
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 127/442 (28%), Positives = 210/442 (47%), Gaps = 66/442 (14%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+ T +YTSGTTG KGVML ++++ Q+ + D L LP HV+ERA +
Sbjct: 180 DLFTLIYTSGTTGEAKGVMLDYRSMATQLMQHERRLSISEHDVSLCFLPLAHVFERAWSF 239
Query: 86 FIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
F+ G + ++ +L +D LQ +P M +VP YE ++S I
Sbjct: 240 FVMHCGAQNVFLRETDLVRDALQAIKPTVMCAVPRFYEKVFSAIHD-------------- 285
Query: 145 ALIRISFAYTAFKRIY--------EGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
++S A T KR++ E F + R ++ + +A P H
Sbjct: 286 ---KVSRAGTLKKRLFHWAVGQGKEKFLIERRGERYPFWLA---------------PAHF 327
Query: 197 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LA+KLV KK++ +G + + + G SL ++ LF+E++G+K++ GYGLTE+ +
Sbjct: 328 LADKLVLKKLRDLLGGNLRFLPAAGASLDDNVILFFESLGLKIKYGYGLTETCATVTCWE 387
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
GSVG + E++I E NE ++VRG +++GYF P T +
Sbjct: 388 ENDFRFGSVGTALPEIEVRI--GEENE---------IQVRGPTLLRGYFNKPEETAASFT 436
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
DGW TGD G + G V + E R KD + S G+ + P +E ++
Sbjct: 437 ADGWFKTGDAGKMDAQ---------GNVFITE-RLKDLMKTSGGKYIAPQRIEGTLVQDR 486
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK-EKTISLLYGELRKW 434
I Q VI ++ A+IVPD + + + A+ I + + + L K E+ +SL +LR+
Sbjct: 487 YIEQAAVIADERHFVSALIVPDFDVLNVYAQAHRIDYFNRAGLVKNEQILSLFAHQLREI 546
Query: 435 TSKCS--FQIGPIHVVDEPFTV 454
+ Q+ ++ +PFT+
Sbjct: 547 QHDLAGFEQVKKFVLLTKPFTM 568
>gi|312133291|ref|YP_004000630.1| acsa2 [Bifidobacterium longum subsp. longum BBMN68]
gi|311772503|gb|ADQ01991.1| AcsA2 [Bifidobacterium longum subsp. longum BBMN68]
Length = 607
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 214/458 (46%), Gaps = 69/458 (15%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL----LHQIRSLYDIVPAENGDKFLSML 73
+ T+ +DD+AT VYTSG+TGNPKG LTHKN + ++L+++V ++ + L L
Sbjct: 175 RVATVRADDLATIVYTSGSTGNPKGAELTHKNFVSITISASQALHEVV-LDDHPRLLLFL 233
Query: 74 PPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P H + R Y + G+ + L DL+ ++P Y++ VP V+E +Y+ +
Sbjct: 234 PLAHCFARFIQYASIASDDGVVGYLPDTKTLLPDLRSFEPTYLLGVPRVFEKVYNAASHK 293
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
R V A + ++ ++ E ++ Y
Sbjct: 294 AGAGWKGRLFVKAA--EAARVWSRKEQAGEQHTFAEIAERAKY----------------- 334
Query: 192 WPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGYGLTESSP 249
E LVY+ ++ A+G V+ GG+ P+ +DL FY IG+ + GYG+TE++
Sbjct: 335 -------ETLVYRTVRGALGPKIKYVACGGA-PLSLDLAHFYNGIGLPMIQGYGMTETAA 386
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
AA R T NV+G+VG P + I+I D +G ++V+G V +GY P
Sbjct: 387 PFAATRVTDNVIGTVGQPAPGSSIRISD-----------EGELQVKGPNVFRGYHNLPEK 435
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T +A DGWL TGD+ I G +V+ GR KD I+ + G+NV P+ LEE
Sbjct: 436 TAEAFTADGWLRTGDLAEIDDE----------GHIVITGRIKDIIITAGGKNVSPIPLEE 485
Query: 370 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL--MAAKRLSIVHADASELSKEKTISLL 427
+ ++ VV+G + GA++ D E + + A LS + + + T + +
Sbjct: 486 EIAKCPIVEHCVVVGDQRPFIGALVTLDPESLALWLPAHGLST----ETPVDRLATNAAV 541
Query: 428 YGELRKWTSKCSFQIG------PIHVVDEPFTVNFLCL 459
E++++ K + + V+D FT CL
Sbjct: 542 REEIQQYVDKANATVSRAESVRKFAVLDTQFTQENKCL 579
>gi|419847624|ref|ZP_14370791.1| AMP-binding enzyme [Bifidobacterium longum subsp. longum 1-6B]
gi|419854092|ref|ZP_14376884.1| AMP-binding enzyme [Bifidobacterium longum subsp. longum 44B]
gi|386410620|gb|EIJ25398.1| AMP-binding enzyme [Bifidobacterium longum subsp. longum 1-6B]
gi|386418162|gb|EIJ32629.1| AMP-binding enzyme [Bifidobacterium longum subsp. longum 44B]
Length = 607
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 214/458 (46%), Gaps = 69/458 (15%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL----LHQIRSLYDIVPAENGDKFLSML 73
+ T+ +DD+AT VYTSG+TGNPKG LTHKN + ++L+++V ++ + L L
Sbjct: 175 RVATVRADDLATIVYTSGSTGNPKGAELTHKNFVSITISASQALHEVV-LDDHPRLLLFL 233
Query: 74 PPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P H + R Y + G+ + L DL+ ++P Y++ VP V+E +Y+ +
Sbjct: 234 PLAHCFARFIQYASIASDDGVVGYLPDTKTLLPDLRSFEPTYLLGVPRVFEKVYNAASHK 293
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
R V A + ++ ++ E ++ Y
Sbjct: 294 AGAGWKGRLFVKAA--EAARVWSRKEQAGEQHTFAEIAERAKY----------------- 334
Query: 192 WPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGYGLTESSP 249
E LVY+ ++ A+G V+ GG+ P+ +DL FY IG+ + GYG+TE++
Sbjct: 335 -------ETLVYRTVRGALGPKIKYVACGGA-PLSLDLAHFYNGIGLPMIQGYGMTETAA 386
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
AA R T NV+G+VG P + I+I D +G ++V+G V +GY P
Sbjct: 387 PFAATRVTDNVIGTVGQPAPGSSIRISD-----------EGELQVKGPNVFRGYHNLPEK 435
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T +A DGWL TGD+ I G +V+ GR KD I+ + G+NV P+ LEE
Sbjct: 436 TAEAFTADGWLRTGDLAEIDDE----------GHIVITGRIKDIIITAGGKNVSPIPLEE 485
Query: 370 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL--MAAKRLSIVHADASELSKEKTISLL 427
+ ++ VV+G + GA++ D E + + A LS + + + T + +
Sbjct: 486 EIAKCPIVEHCVVVGDQRPFIGALVTLDPESLALWLPAHGLST----ETPVDRLATNAAV 541
Query: 428 YGELRKWTSKCSFQIG------PIHVVDEPFTVNFLCL 459
E++++ K + + V+D FT CL
Sbjct: 542 REEIQQYVDKANATVSRAESVRKFAVLDTQFTQENKCL 579
>gi|317482046|ref|ZP_07941071.1| AMP-binding enzyme [Bifidobacterium sp. 12_1_47BFAA]
gi|322688533|ref|YP_004208267.1| long-chain-fatty acid CoA ligase [Bifidobacterium longum subsp.
infantis 157F]
gi|419851292|ref|ZP_14374241.1| AMP-binding enzyme [Bifidobacterium longum subsp. longum 35B]
gi|419852309|ref|ZP_14375196.1| AMP-binding enzyme [Bifidobacterium longum subsp. longum 2-2B]
gi|291517361|emb|CBK70977.1| Long-chain acyl-CoA synthetases (AMP-forming) [Bifidobacterium
longum subsp. longum F8]
gi|316916613|gb|EFV38010.1| AMP-binding enzyme [Bifidobacterium sp. 12_1_47BFAA]
gi|320459869|dbj|BAJ70489.1| putative long-chain-fatty acid CoA ligase [Bifidobacterium longum
subsp. infantis 157F]
gi|386406548|gb|EIJ21550.1| AMP-binding enzyme [Bifidobacterium longum subsp. longum 35B]
gi|386411258|gb|EIJ26003.1| AMP-binding enzyme [Bifidobacterium longum subsp. longum 2-2B]
Length = 607
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 214/458 (46%), Gaps = 69/458 (15%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL----LHQIRSLYDIVPAENGDKFLSML 73
+ T+ +DD+AT VYTSG+TGNPKG LTHKN + ++L+++V ++ + L L
Sbjct: 175 RVATVRADDLATIVYTSGSTGNPKGAELTHKNFVSITISASQALHEVV-LDDHPRLLLFL 233
Query: 74 PPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P H + R Y + G+ + L DL+ ++P Y++ VP V+E +Y+ +
Sbjct: 234 PLAHCFARFIQYASIASDDGVVGYLPDTKTLLPDLRSFEPTYLLGVPRVFEKVYNAASHK 293
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
R V A + ++ ++ E ++ Y
Sbjct: 294 AGAGWKGRLFVKAA--EAARVWSRKEQAGEQHTFAEIAERAKY----------------- 334
Query: 192 WPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGYGLTESSP 249
E LVY+ ++ A+G V+ GG+ P+ +DL FY IG+ + GYG+TE++
Sbjct: 335 -------ETLVYRTVRGALGPKIKYVACGGA-PLSLDLAHFYNGIGLPMIQGYGMTETAA 386
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
AA R T NV+G+VG P + I+I D +G ++V+G V +GY P
Sbjct: 387 PFAATRVTDNVIGTVGQPAPGSSIRISD-----------EGELQVKGPNVFRGYHNLPEK 435
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T +A DGWL TGD+ I G +V+ GR KD I+ + G+NV P+ LEE
Sbjct: 436 TAEAFTADGWLRTGDLAEIDDE----------GHIVITGRIKDIIITAGGKNVSPIPLEE 485
Query: 370 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL--MAAKRLSIVHADASELSKEKTISLL 427
+ ++ VV+G + GA++ D E + + A LS + + + T + +
Sbjct: 486 EIAKCPIVEHCVVVGDQRPFIGALVTLDPESLALWLPAHGLST----ETPVDRLATNAAV 541
Query: 428 YGELRKWTSKCSFQIG------PIHVVDEPFTVNFLCL 459
E++++ K + + V+D FT CL
Sbjct: 542 REEIQQYVDKANATVSRAESVRKFAVLDTQFTQENKCL 579
>gi|429731164|ref|ZP_19265804.1| AMP-binding enzyme [Corynebacterium durum F0235]
gi|429146317|gb|EKX89374.1| AMP-binding enzyme [Corynebacterium durum F0235]
Length = 638
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/418 (30%), Positives = 197/418 (47%), Gaps = 65/418 (15%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD------IVPAENGDKFLS 71
+ + S D+A+ VYTSGTTG PKG LTH N L Q+R+L VP G + L+
Sbjct: 209 RIDATDSSDLASLVYTSGTTGRPKGCRLTHHNWLAQVRALLTHPIGAIAVP---GTRVLT 265
Query: 72 MLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQK 130
LP HV RA + G + ++ +L + QR +P+ ++ VP V+E + +G
Sbjct: 266 FLPLAHVLSRAVSLAVAIGGATQSHWSDFSSLSVEFQRARPNMILGVPRVFEKVRNGAAA 325
Query: 131 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 190
+ R R++ Y+ EG PS + +
Sbjct: 326 NAQDNGPLRAAAFAQAERVAQDYSRALDTPEG---------PSRALRM------------ 364
Query: 191 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
H + +KLVY KI++A+G S K +SGG ++ + F+ +GV V GYGLTE++
Sbjct: 365 ---KHAMFDKLVYSKIRAAMGASVKYCISGGSAMSPDLLHFFRGMGVTVYEGYGLTETTA 421
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
AA NV+GSVG P+ +I D G + +RG + GY+ N A
Sbjct: 422 A-AAVNFDDNVIGSVGRPVGGMSARIND-----------DGEILLRGETLFDGYWNNSEA 469
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T + +D++GW NTGD+G + G +V+ GR KD IV + G+NV P LE+
Sbjct: 470 TAENIDQEGWFNTGDLGELLD----------SGHIVITGRKKDLIVTAGGKNVSPGPLED 519
Query: 370 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLL 427
LI Q +V+G + G +I D+ A KR + H + + +T+S L
Sbjct: 520 RLRSHPLISQALVVGDGKPYVGVLIALDE----AALKRWKLTH----NIPESRTVSEL 569
>gi|239622452|ref|ZP_04665483.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|239514449|gb|EEQ54316.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
Length = 607
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/458 (27%), Positives = 214/458 (46%), Gaps = 69/458 (15%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL----LHQIRSLYDIVPAENGDKFLSML 73
+ T+ +DD+AT VYTSG+TGNPKG LTHKN + ++L+++V ++ + L L
Sbjct: 175 RVATVRADDLATIVYTSGSTGNPKGAELTHKNFVSITISASQALHEVV-LDDHPRLLLFL 233
Query: 74 PPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P H + R Y + G+ + L DL+ ++P Y++ VP V+E +Y+ +
Sbjct: 234 PLAHCFARFIQYASIASDDGVVGYLPDTKTLLPDLRSFEPTYLLGVPRVFEKVYNAASHK 293
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
R V A + ++ ++ E ++ Y
Sbjct: 294 AGAGWKGRLFVKAA--EAARVWSRKEQAGEQHTFAEIAERAKY----------------- 334
Query: 192 WPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGYGLTESSP 249
E LVY+ ++ A+G V+ GG+ P+ +DL FY IG+ + GYG+TE++
Sbjct: 335 -------ETLVYRTVRGALGPKIKYVACGGA-PLSLDLAHFYNGIGLPMIQGYGMTETAA 386
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
AA R T NV+G+VG P + I+I D +G ++V+G V +GY P
Sbjct: 387 PFAATRVTDNVIGTVGQPAPGSSIRISD-----------EGELQVKGPNVFRGYHNLPEK 435
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T +A DGWL TGD+ I G +++ GR KD I+ + G+NV P+ LEE
Sbjct: 436 TAEAFTADGWLRTGDLAEIDD----------AGRIIITGRIKDIIITAGGKNVSPIPLEE 485
Query: 370 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL--MAAKRLSIVHADASELSKEKTISLL 427
+ ++ VV+G + GA++ D E + + A LS + + + T + +
Sbjct: 486 EIAKCPIVEHCVVVGDQRPFIGALVTLDPESLALWLPAHGLST----ETPVDRLATNAAV 541
Query: 428 YGELRKWTSKCSFQIG------PIHVVDEPFTVNFLCL 459
E++++ K + + V+D FT CL
Sbjct: 542 REEIQQYVDKANATVSRAESVRKFAVLDTQFTQENKCL 579
>gi|405980028|ref|ZP_11038369.1| hypothetical protein HMPREF9241_01092 [Actinomyces turicensis
ACS-279-V-Col4]
gi|404391403|gb|EJZ86467.1| hypothetical protein HMPREF9241_01092 [Actinomyces turicensis
ACS-279-V-Col4]
Length = 627
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/387 (31%), Positives = 182/387 (47%), Gaps = 53/387 (13%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP---AENGDKFLSMLP 74
+ E + DDIAT VYTSGT G PKG +L+H+N + + + +P A + L LP
Sbjct: 197 RSEALTKDDIATIVYTSGTMGTPKGAVLSHENFTNLCLNAHSWMPEIAAGKDSRLLLFLP 256
Query: 75 PWHVYERACGYF-IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 133
HV+ R F I G+ + ++NL +DL ++P Y++ VP V E +Y+ +
Sbjct: 257 LAHVFARFLQVFQISGNGVLGHASNIKNLLNDLASFKPSYLLVVPRVLEKIYNSADTK-- 314
Query: 134 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
+S +R + R +I+ AY+ EG PS A L
Sbjct: 315 -ASGPKRKIFRWAAKIAIAYSRALDTEEG---------PS---------------ASLKA 349
Query: 194 LHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
H LA KLVY++I + G + VSGG L + FY +G+ V GYGLTE+ ++
Sbjct: 350 QHALANKLVYQQIIRLVGGNADYIVSGGAPLATWLAHFYRGVGIPVLEGYGLTETVGPVS 409
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
P + +G+VG + KI D +G + ++G + Q Y +P AT
Sbjct: 410 VNTPHLSKIGTVGPALPPMSFKISD-----------EGEILLKGPSIFQYYHNDPEATTA 458
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
EDGW TGD+G S G + + GRAK+ IV + G+NV P LE
Sbjct: 459 CFTEDGWFRTGDLG----------SLDRDGYVSITGRAKEIIVTAGGKNVAPAVLENPMR 508
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKE 399
LI Q++V+G + A+I D E
Sbjct: 509 SHPLISQVLVVGDQRPFIAALITLDAE 535
>gi|383820039|ref|ZP_09975299.1| AMP-dependent synthetase and ligase [Mycobacterium phlei
RIVM601174]
gi|383335859|gb|EID14280.1| AMP-dependent synthetase and ligase [Mycobacterium phlei
RIVM601174]
Length = 599
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 127/384 (33%), Positives = 188/384 (48%), Gaps = 53/384 (13%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDKFLSMLPPWHVY 79
I + D AT +YTSGTTG PKGV LTH NL+H+IR + PA G+K L LP HV
Sbjct: 178 IRASDPATLIYTSGTTGQPKGVQLTHSNLVHEIRGDKECFPAMLAKGEKMLMFLPLAHVL 237
Query: 80 ERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
RA F+ + L +T+ ++NL ++P ++SVP V+E +Y+ +Q
Sbjct: 238 ARAITLAAFTYKVTLGFTSDIKNLVPTFAVFKPTLVVSVPRVFEKVYN-TAEQNAEDGGK 296
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
R+ A A A TA + + ++ P L+ L H +
Sbjct: 297 GRIFALA------AKTAIE-----WSQAQDAGGPGLLLRL---------------RHAVF 330
Query: 199 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+KLVY K+++A+G +A +SGG L + FY +G+ + GYGLTE+S I R
Sbjct: 331 DKLVYGKLRAALGGECRAAISGGAPLGARLGHFYRGVGLTIYEGYGLTETSAAITVNRIG 390
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
+GSVG + ++I D +E+L V+G V GY++N T A+ D
Sbjct: 391 DLKIGSVGKLVPGNSMRIND--DDELL---------VKGGVVFAGYWRNEEET-NAVFSD 438
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GW +TGD+G I G L + GR K+ IV + G+NV P LE+ LI
Sbjct: 439 GWFHTGDLGRIDED----------GFLTIIGRKKEIIVTAGGKNVAPAILEDRLRAHPLI 488
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEV 401
Q + +G + GA+I D E +
Sbjct: 489 SQAMAVGDGKPFIGALITIDPEAI 512
>gi|304393630|ref|ZP_07375558.1| AMP-binding enzyme [Ahrensia sp. R2A130]
gi|303294637|gb|EFL89009.1| AMP-binding enzyme [Ahrensia sp. R2A130]
Length = 620
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 189/417 (45%), Gaps = 49/417 (11%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD A VYTSGTTG PKG +TH NLL+ + + P GD+ + LP H+ ER
Sbjct: 200 DDTAIMVYTSGTTGMPKGATITHANLLYSVAAGATAAPLYEGDEQICFLPLCHILERVFS 259
Query: 85 YF--IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
F I R + + D+LQ PH ++VP ++E +YS
Sbjct: 260 GFSPIAFRTRLNFAESPETVFDNLQEVSPHVFVAVPRLWEKIYS---------------- 303
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
R I A +RIY+ + ++ VA + + + L+ E +V
Sbjct: 304 -RVTILSQEATPLQRRIYDA-AIANGTRRVELEVA------GKPLPFGVRLKELIYEYVV 355
Query: 203 YKKIQSAIGISK--AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
++ ++ +G+ + G SG + + ++ AIGV V GYG+TESS VI+ N
Sbjct: 356 FRNLRRMLGLDRLRRGASGAAPIAPQLLSWFNAIGVNVLEGYGMTESSGVISLNATGSNK 415
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
+G+VG PI+ EI+I D G ++ R + GY P T + EDGWL
Sbjct: 416 VGTVGRPIDGAEIRIAD-----------DGEIQYRAGNMFAGYLNLPEKTAETFSEDGWL 464
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
TGDIG + G L + GR KD I+ + G+N+ P E+E S +I
Sbjct: 465 RTGDIGHLDED----------GYLTITGRLKDIIITAGGKNITPAEIENRLKFSPMITDA 514
Query: 381 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 437
V+IG ++ A+++ D+E V A+ I D L + L G + + +K
Sbjct: 515 VIIGDKRKFLSALVMIDQENVEKFAQDRRIPFNDFQSLCAATEVRDLIGSIVEDVNK 571
>gi|431931379|ref|YP_007244425.1| AMP-forming long-chain acyl-CoA synthetase [Thioflavicoccus mobilis
8321]
gi|431829682|gb|AGA90795.1| AMP-forming long-chain acyl-CoA synthetase [Thioflavicoccus mobilis
8321]
Length = 606
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 186/373 (49%), Gaps = 48/373 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
D++AT VYTSGTTG PKGVML+H+N+L + I+ D FLS LP H+ ER G
Sbjct: 187 DELATIVYTSGTTGRPKGVMLSHRNILFDAHASLTIIDCYQEDAFLSFLPLSHMLERTGG 246
Query: 85 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 142
Y++ G + Y+ +V + +DLQ +P MI+VP ++E +Y+ + +QI + R +
Sbjct: 247 YYLPMMAGSVVAYSRSVGQIAEDLQAIRPTAMIAVPRIFERVYTRLHEQIQGRPRSVRAL 306
Query: 143 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
+RI + + G+ + +++
Sbjct: 307 FHLAVRIGWMRFEHGQGRRGWSPLLLLWPLLH------------------------KRVA 342
Query: 203 YKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
+ + G + VSGG ++P + + +G+ + GYGLTE+SPV++ N
Sbjct: 343 GRVLDKLGGRLRVAVSGGAAMPTEVAHLFIGLGLPIVQGYGLTETSPVVSVNSLQDNRPE 402
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
SVG P+ +++I D +E+L V+G M GY+ N +AT + +D GWL+T
Sbjct: 403 SVGIPLRGIQVRIGD--DDELL---------VKGPGNMLGYWNNHAATARMVDPAGWLHT 451
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD ++R G + + GR KD +VLS GE V P ++E A L+ Q++V
Sbjct: 452 GD-----------QARIEQGYIYITGRIKDILVLSNGEKVPPADMEMAIGLDPLVEQVLV 500
Query: 383 IGQDQRRPGAIIV 395
+G+ + GA++V
Sbjct: 501 VGEGRPFLGALVV 513
>gi|290769763|gb|ADD61538.1| putative protein [uncultured organism]
Length = 607
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/458 (27%), Positives = 214/458 (46%), Gaps = 69/458 (15%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH----QIRSLYDIVPAENGDKFLSML 73
+ T+ +DD+AT VYTSG+TGNPKG LTHKN + ++L+++V ++ + L L
Sbjct: 175 RVATVRADDLATIVYTSGSTGNPKGAELTHKNFVSITITASQALHEVV-LDDHPRLLLFL 233
Query: 74 PPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P H + R Y + G+ + L DL+ ++P Y++ VP V+E +Y+ +
Sbjct: 234 PLAHCFARFIQYASIASDDGVVGYLPDTKTLLPDLRSFEPTYLLGVPRVFEKVYNAASHK 293
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
R V A + ++ ++ E ++ Y
Sbjct: 294 AGAGWKGRLFVKAA--EAARIWSRKEQAGEQHTFAEIAERAKY----------------- 334
Query: 192 WPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGYGLTESSP 249
E LVY+ ++ A+G V+ GG+ P+ +DL FY IG+ + GYG+TE++
Sbjct: 335 -------ETLVYRTVRGALGPKIKYVACGGA-PLSLDLAHFYNGIGLPMIQGYGMTETAA 386
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
AA R T NV+G+VG P + I+I D +G ++V+G V +GY P
Sbjct: 387 PFAATRVTDNVIGTVGQPAPGSSIRISD-----------EGELQVKGPNVFRGYHNLPEK 435
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T +A DGWL TGD+ I G +++ GR KD I+ + G+NV P+ LEE
Sbjct: 436 TAEAFTADGWLRTGDLAEIDD----------AGRIIITGRIKDIIITAGGKNVSPIPLEE 485
Query: 370 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEE--VLMAAKRLSIVHADASELSKEKTISLL 427
+ ++ VV+G + GA++ D E + + A LS + + + T + +
Sbjct: 486 EIAKCPIVEHCVVVGDQRPFIGALVTLDPESLAIWLPAHGLST----ETPVDRLATNAAV 541
Query: 428 YGELRKWTSKCSFQIG------PIHVVDEPFTVNFLCL 459
E++++ K + + V+D FT CL
Sbjct: 542 REEIQQYVDKANATVSRAESVRKFAVLDTQFTQENKCL 579
>gi|392391090|ref|YP_006427693.1| AMP-forming long-chain acyl-CoA synthetase [Ornithobacterium
rhinotracheale DSM 15997]
gi|390522168|gb|AFL97899.1| AMP-forming long-chain acyl-CoA synthetase [Ornithobacterium
rhinotracheale DSM 15997]
Length = 595
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 127/409 (31%), Positives = 199/409 (48%), Gaps = 47/409 (11%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
++ I SDD AT +YTSGTTG PKGV+LTH N L I + + + D ++ LP H
Sbjct: 170 RFNEIDSDDTATLIYTSGTTGKPKGVILTHTNFLAAIENHKERYDLTDKDVSMAFLPLSH 229
Query: 78 VYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
++ERA + S G+ +Y R++ D L +P M SVP +YE +Y Q I T S
Sbjct: 230 IFERAWSFLALSVGMTNIYNRDPRSIADMLLIAKPTAMCSVPRLYEKVY---QMAINTMS 286
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
++ V + +A K+ E RN K + + + D
Sbjct: 287 KSKAPVKKLFF---WALEIGKKREE---YVRNGKNLPFGLKIKDQ--------------- 325
Query: 197 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
+AE LVYKK + +G + + + GG + + F+ A+ + + VGYGL+E++ +++ +
Sbjct: 326 IAETLVYKKFREKLGGNLSFIPCGGAYVGDEVVEFFRAMRLPLIVGYGLSETTATVSSCQ 385
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
LGSVG PIN+ ++KI E NE+L V+G VM+GY+ P ++A
Sbjct: 386 INDYELGSVGKPINNVDVKI--GENNEIL---------VKGRTVMKGYYNRPEENEKAFT 434
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
+DGW TGD G G LV+ R K+ I + G+ + P +E +
Sbjct: 435 KDGWFKTGDAGRFDEK----------GNLVITDRIKELIKTAGGKYIAPQMVENVLTKDP 484
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 424
I Q VV G+ + A+I P+ + + AK +I + EL K K +
Sbjct: 485 EIAQAVVYGERKPYAVALITPNFDWLKNWAKEQNINFQNMVELIKNKKV 533
>gi|423343693|ref|ZP_17321406.1| hypothetical protein HMPREF1077_02836 [Parabacteroides johnsonii
CL02T12C29]
gi|409214715|gb|EKN07724.1| hypothetical protein HMPREF1077_02836 [Parabacteroides johnsonii
CL02T12C29]
Length = 634
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 216/427 (50%), Gaps = 49/427 (11%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
+++ + D AT YTSGTT +PKGV+LTH+N + V ++ + L +LP H +
Sbjct: 172 QSLQNGDYATITYTSGTTADPKGVILTHRNYTANVEQALSCVDIDDTWRTLVILPLDHCF 231
Query: 80 ERACGYFIF-SRG-----IELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQK 130
G++IF S+G +++ T + LK+ +++ ++P+ ++SVP + + I++
Sbjct: 232 AHVVGFYIFMSKGASVATVQVGRTGLETLKNIPVNIKEFKPYLILSVPALAKNFKKNIEQ 291
Query: 131 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 190
I R + + R+ IY G + +L
Sbjct: 292 GI-------RAQGKHVTRLFNFALKVAYIYNGDGGEDKGRGTRFL--------------- 329
Query: 191 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
L PL L +++++ K++ G K + GG L + FY AIG+ + GYGL+E++P
Sbjct: 330 LKPLVSLFDRVLFTKVRENFGGQLKFFIGGGALLDKDLQKFYYAIGLPMYQGYGLSEATP 389
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
VI+ P + GS G + ++KI DA+ E LP G KG + +RG VM GY+KNP +
Sbjct: 390 VISTNGPHRHTFGSSGVLVRPLDLKICDADGKE-LPTGEKGEIVIRGENVMAGYWKNPVS 448
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T + + + WL TGD+G++ H G+L + GR K ++ S GE P +EE
Sbjct: 449 TAETV-RNRWLYTGDMGYMG--HD--------GLLYVLGRFKSLLIGSDGEKYSPEGIEE 497
Query: 370 AALR-SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD-ASELSKEKTISLL 427
A + SS I Q+++ A++VP+K+ + K L+ H D +S+ +E+ I ++
Sbjct: 498 ALVEHSSCIDQLILYNNQSPYTVALVVPNKDRL---KKHLAHQHLDLSSDKGREEAIRII 554
Query: 428 YGELRKW 434
++ ++
Sbjct: 555 QSQIDRF 561
>gi|189464499|ref|ZP_03013284.1| hypothetical protein BACINT_00841 [Bacteroides intestinalis DSM
17393]
gi|189438289|gb|EDV07274.1| AMP-binding enzyme [Bacteroides intestinalis DSM 17393]
Length = 604
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/440 (29%), Positives = 210/440 (47%), Gaps = 56/440 (12%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM--LPPWHVYER 81
DD+A +YTSGTTG PKGVML H N + R ++DI + D+ +SM LP HV+E+
Sbjct: 182 DDDLANILYTSGTTGEPKGVMLHHSNYMEAFR-IHDIRLVDMTDQDVSMNFLPLTHVFEK 240
Query: 82 ACGYFIFSRGIELMYTAVR--NLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
A Y +G+++ +R +++ ++ +P M SVP +E +Y+G+Q++I + +
Sbjct: 241 AWTYLCIHKGVQICIN-LRPVDIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKIAQETGLK 299
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + I++ +I+ L + + P L++ L + E
Sbjct: 300 KAMMLDAIKVG-------KIHNIDYLRKGKTPP-----LMNQLKYK-----------FYE 336
Query: 200 KLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
K VY ++ IGI + G ++P I F ++G+ + VGYGLTES+ ++
Sbjct: 337 KTVYALLKKTIGIENGNFFPTAGAAVPDEICEFVHSVGINMLVGYGLTESTATVSCFLNE 396
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
+GSVG + E+KI E NE+L +RG + +GY+K AT A+D+D
Sbjct: 397 GYEIGSVGTIMPDVEVKI--GEENEIL---------LRGKTITKGYYKKAEATAAAIDKD 445
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GW +TGD G++ G L L R KD S G+ V P LE I
Sbjct: 446 GWFHTGDAGYLK-----------GDQLYLTERIKDLFKTSNGKYVSPQALETKLAIDRYI 494
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS 436
QI +I ++ A+IVP V AK I + + EL + K I L +
Sbjct: 495 DQIAIIADQRKFVSALIVPVYGFVKDYAKEKGIEYKNMEELLQHPKVIGLFRARIDTLQQ 554
Query: 437 KCSF--QIGPIHVVDEPFTV 454
+ + Q+ ++ EPF++
Sbjct: 555 QFAHYEQVKRFTLLPEPFSM 574
>gi|305667499|ref|YP_003863786.1| putative long chain fatty-acid CoA ligase [Maribacter sp. HTCC2170]
gi|88709547|gb|EAR01780.1| probable long chain fatty-acid CoA ligase [Maribacter sp. HTCC2170]
Length = 605
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/390 (31%), Positives = 183/390 (46%), Gaps = 50/390 (12%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 80
TI S+D+ T +YTSGTTGNPKGVML+H N++H I ++P + G+K +S LP H++E
Sbjct: 163 TIKSEDLVTIIYTSGTTGNPKGVMLSHGNIMHVIIKTGALLPTKEGEKVISFLPLCHIFE 222
Query: 81 RACGYFIFSRGIELMYTAVRNL---KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 137
RA + R + + + NL DL +P +VP + E +Y I +
Sbjct: 223 RAVSFAYCYRNVSVYFCGTDNLSGPNGDLIDVRPVAFTTVPRLLEKIYEAIYNKGLALEG 282
Query: 138 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 197
+R + + +S AY +Q A I W +
Sbjct: 283 IKRKLFFWALSLSDAYEL--------------EQKLSFTAKIKW--------------KI 314
Query: 198 AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR- 255
A+KL++ K + A+G + K +G P+ I + A G+ ++ GYGLTE++P + A
Sbjct: 315 ADKLIFSKWRDALGGNIKLIFTGAAPCPLKIMRVFCAAGISIREGYGLTETAPTLTANSI 374
Query: 256 -PTCNVLGSVGHPINHTEIKI--VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
P VLG+VG I E+ I D NE +G + V G VM GY+K P Q
Sbjct: 375 DPNGAVLGTVGTVIEGVELLIDKSDGNYNE-----DEGEILVIGPNVMSGYYKKPEINAQ 429
Query: 313 ALDE-DG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
E DG W TGDIG + + L + R K+ + S G+ V P +E
Sbjct: 430 VFKEIDGKKWFCTGDIGKLV------KGPNGQDFLKITDRKKELLKTSGGKYVAPAPIEN 483
Query: 370 AALRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
LI Q++V+G Q+ A+IVP +E
Sbjct: 484 RIKEDFLIEQMMVVGDKQKYVSALIVPAEE 513
>gi|253988580|ref|YP_003039936.1| long-chain-fatty-acid--CoA ligase [Photorhabdus asymbiotica]
gi|253780030|emb|CAQ83191.1| long-chain-fatty-acid--CoA ligase [Photorhabdus asymbiotica]
Length = 600
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/415 (29%), Positives = 200/415 (48%), Gaps = 47/415 (11%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+ T +YTSGTTG PKGVML +++L +Q+ S +++ D LS LP H++ERA
Sbjct: 181 DDLFTLIYTSGTTGEPKGVMLDYRSLAYQLYSHDNVLTLTELDVSLSFLPLSHIFERAWS 240
Query: 85 YFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
+++ G + +Y N + + +P M +VP YE +YS + +++ + RR +
Sbjct: 241 FYVMHTGAQNVYLTDTNFVRQAMAVIRPTVMCAVPRFYEKIYSAVFEKVSKAPWHRRKL- 299
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
++A KR L + Q + S LW++ + H LA+KLV
Sbjct: 300 -----FNWAIECGKRQ----VLRKLQGEKS-------CLWSKAV-------HRLADKLVL 336
Query: 204 KKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K+++ +G + + G L I LF+ A+GV ++ GYG+TE+ ++ VLG
Sbjct: 337 SKLRNVLGGRVRFLPAAGARLDETIILFFLAVGVNIKYGYGMTETCATVSCWGEQGYVLG 396
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G P+ +++I G ++VRG VM+GYF T + EDGWL T
Sbjct: 397 SIGTPMPGIDVRI-----------GEDDEIQVRGPIVMKGYFNQQEETTRTFTEDGWLRT 445
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD G + + G L + R KD + S G+ V P +E + I + V
Sbjct: 446 GDAGKLDEN----------GNLFITERLKDLMKTSNGKYVAPQMIESTLGQDRFIEHVAV 495
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 437
I ++ A+IVP + + AK +++ + D EL I ++ + K K
Sbjct: 496 IADARKFVSALIVPCYDALEEYAKSVNLKYHDRVELLSNSHIVAMFEQRLKEIQK 550
>gi|167753742|ref|ZP_02425869.1| hypothetical protein ALIPUT_02023 [Alistipes putredinis DSM 17216]
gi|167658367|gb|EDS02497.1| AMP-binding enzyme [Alistipes putredinis DSM 17216]
Length = 634
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 136/468 (29%), Positives = 223/468 (47%), Gaps = 67/468 (14%)
Query: 12 IAGKHYKYETIG----SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGD 67
+AG ++ IG +DD AT YTSGTT +PKGV+LTH+N + + +
Sbjct: 158 LAGHKEEFLKIGQAIRNDDYATITYTSGTTADPKGVVLTHRNYTANVEQSLSRIDIPSSY 217
Query: 68 KFLSMLPPWHVYERACGYFIF----------SRGIELMYTAVRNLKDDLQRYQPHYMISV 117
+ L +LP H + G++I G M T ++N+ +++ +P++++SV
Sbjct: 218 RTLIILPLDHCFAHVVGFYIMIACGASVATVQIGATPMET-LKNIPQNIREVKPNFLLSV 276
Query: 118 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 177
P L +K I TS A+ L + TA+ +G+ +
Sbjct: 277 P----ALAKNFRKNIETSIRAKGPFTERLFDFALR-TAYIYNQDGYHKGKG--------- 322
Query: 178 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGV 236
W RI+ A P+ L + ++++K++ A G S GGG+ L + F+ AIG+
Sbjct: 323 ---W---RILLA---PVVGLFDLVLFRKVREAFGGSLEFFVGGGALLDSELQRFFYAIGI 373
Query: 237 KVQVGYGLTESSPVIAARRPTC--NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 294
+ GYGL+E++PVI+ P + GS G + ++KI+D E E LP G KG + +
Sbjct: 374 PMFQGYGLSEATPVISTNSPKYHWHKFGSSGKILEPLDLKILDEEGRE-LPRGQKGEIVI 432
Query: 295 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 354
RG VM GY+KNP AT + +GWL+TGD+G+++ L + GR K +
Sbjct: 433 RGENVMAGYWKNPDATAATV-RNGWLHTGDMGYVSEDD----------FLYVLGRFKSLL 481
Query: 355 VLSTGENVEPLELEEAAL-RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA 413
+ S GE P +EEA + +S I QI++ GAI+VP+++ A R +
Sbjct: 482 IASDGEKYSPEGMEEAIVDKSPFIDQIIIYNNQSPFTGAIVVPNRD-----ALRRELDAR 536
Query: 414 DASELSKEKTISLLYGELRKWTSKCSFQ--------IGPIHVVDEPFT 453
D E +L E+ ++ + + + +VDEPFT
Sbjct: 537 DIREGRAAAAADILGAEIDRYRAGGPYAGEFPERWLPAGLAIVDEPFT 584
>gi|213691339|ref|YP_002321925.1| AMP-dependent synthetase and ligase [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
gi|384198457|ref|YP_005584200.1| putative long-chain-fatty acid CoA ligase [Bifidobacterium longum
subsp. infantis ATCC 15697 = JCM 1222]
gi|213522800|gb|ACJ51547.1| AMP-dependent synthetase and ligase [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
gi|320457409|dbj|BAJ68030.1| putative long-chain-fatty acid CoA ligase [Bifidobacterium longum
subsp. infantis ATCC 15697 = JCM 1222]
Length = 607
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/458 (27%), Positives = 214/458 (46%), Gaps = 69/458 (15%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH----QIRSLYDIVPAENGDKFLSML 73
+ T+ +DD+AT VYTSG+TGNPKG LTHKN + ++L+++V ++ + L L
Sbjct: 175 RVATVRADDLATIVYTSGSTGNPKGAELTHKNFVSITITASQALHEVV-LDDHPRLLLFL 233
Query: 74 PPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P H + R Y + G+ ++L DL+ ++P Y++ VP V+E +Y+ +
Sbjct: 234 PLAHCFARFIQYASIASDDGVVGYLPDTKSLLPDLRSFEPTYLLGVPRVFEKVYNAASHK 293
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
R V A + ++ ++ E ++ Y
Sbjct: 294 AGAGWKGRLFVKAA--EAARVWSRKEQAGEQHTFAEIAERAKY----------------- 334
Query: 192 WPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGYGLTESSP 249
E LVY+ ++ A+G V+ GG+ P+ +DL FY IG+ + GYG+TE++
Sbjct: 335 -------ETLVYRTVRGALGPKIKYVACGGA-PLSLDLAHFYNGIGLPMIQGYGMTETAA 386
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
AA R T NV+G+VG P + I+I D +G ++V+G V +GY P
Sbjct: 387 PFAATRVTDNVIGTVGQPAPGSSIRISD-----------EGELQVKGPNVFRGYHNLPEK 435
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T +A DGWL TGD+ I G + + GR KD I+ + G+NV P+ LEE
Sbjct: 436 TAEAFTADGWLRTGDLASIDDE----------GRITITGRIKDIIITAGGKNVSPIPLEE 485
Query: 370 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL--MAAKRLSIVHADASELSKEKTISLL 427
+ ++ VV+G + GA++ D E + + A LS + + + T + +
Sbjct: 486 EIAKCPIVEHCVVVGDQRPFIGALVTLDPESLALWLPAHGLST----ETPVDRLATNAAV 541
Query: 428 YGELRKWTSKCSFQIG------PIHVVDEPFTVNFLCL 459
E++++ K + + V+D FT CL
Sbjct: 542 REEIQQYVDKANATVSRAESVRKFAVLDTQFTQENKCL 579
>gi|453066970|ref|ZP_21970260.1| long-chain fatty-acid--CoA ligase [Rhodococcus qingshengii BKS
20-40]
gi|452767357|gb|EME25597.1| long-chain fatty-acid--CoA ligase [Rhodococcus qingshengii BKS
20-40]
Length = 597
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 187/389 (48%), Gaps = 64/389 (16%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD------IVPAENGDKFLSMLPP 75
I +DD+A+ VYTSGTTG PKG +LTH+N L ++R + VP G++ L+ LP
Sbjct: 172 IKADDLASLVYTSGTTGRPKGCILTHRNFLSEVRGILTASIGKVAVP---GNRVLTFLPL 228
Query: 76 WHVYERACGYFIFSRGI-ELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 134
HV RA F G + ++ + +RY+P+ ++ VP V+E + G
Sbjct: 229 AHVLARAVSLATFEAGASQAHWSDFATITTQFERYKPNTILGVPRVFEKVRDG------- 281
Query: 135 SSAARRVVARALIR---ISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
AAR+ + I +FA T K E ++ PS IL
Sbjct: 282 --AARKAESGGKIPGAIFAFAETTAKEYSEAL----DKGGPSL---------------IL 320
Query: 192 WPLHLLAEKLVYKKIQSAIGISK-AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 250
H +A+KLVY K++ A+G +SGGG+L + F+ +GV + GYGLTE++
Sbjct: 321 KAKHAVADKLVYSKLREALGGECWFAISGGGALTPELGHFFRGLGVPIYEGYGLTETTAA 380
Query: 251 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSAT 310
P +G+VG P+ ++I + G +++ G V +GY+KN AT
Sbjct: 381 HCVNVPGAQKIGTVGQPMGGNGVRIAE-----------DGEIELNGGVVFKGYWKNDKAT 429
Query: 311 KQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA 370
++ +GW+ TGD+G + G L + GR KD +V + G+NV P +E+
Sbjct: 430 EETF-VNGWMRTGDLGEL----------DSDGYLSITGRKKDLLVTAGGKNVSPGPMEDR 478
Query: 371 ALRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
S++ Q VV+G + A++ D E
Sbjct: 479 IRSHSIVSQAVVVGDGKTYITALLTVDPE 507
>gi|114565123|ref|YP_752637.1| AMP-dependent synthetase and ligase [Shewanella frigidimarina NCIMB
400]
gi|114336416|gb|ABI73798.1| AMP-dependent synthetase and ligase [Shewanella frigidimarina NCIMB
400]
Length = 597
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 127/407 (31%), Positives = 192/407 (47%), Gaps = 58/407 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+ T +YTSGTTGNPKGVML ++N I+ +P GD L+ LP HV+ER
Sbjct: 179 DDLFTLIYTSGTTGNPKGVMLDYRNFASMIKQHDSELPFTAGDVSLAFLPLSHVFERGWS 238
Query: 85 YFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
++ RG +Y N +K+ L +PH + +VP E +YS + ++ + R+ +
Sbjct: 239 MYVLCRGGHNVYLNDTNRIKEALIAVKPHTLCAVPRFLEKIYSAVHDKVGQAPKVRQTLF 298
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
+R+ KR +E +++ + S WL A+ W LA KLVY
Sbjct: 299 AWAMRVG------KRQFE---VSQGRASGSL------WLSAQ------WK---LANKLVY 334
Query: 204 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL- 261
K+Q +G K GG +L +++ F+ +IGV V GYG+TE+ + TCN L
Sbjct: 335 SKLQQVLGGRLKFMPVGGAALDINVASFFHSIGVPVLCGYGMTETCATV-----TCNTLD 389
Query: 262 ----GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
GS G P+ +IK+ + +E+L VRG VM+GY+ P T A ED
Sbjct: 390 NRVPGSNGKPLEAMQIKL--GKDDEIL---------VRGDTVMRGYYNRPQDTADAF-ED 437
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GWL TGD G I G L + R K+ + S G+ + P +E I
Sbjct: 438 GWLKTGDAGRIDEQ----------GNLYITDRIKELMKTSNGKYIAPQRVEGKVACCPFI 487
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 424
Q+ ++ + A+IVP E + AK I + EL + +
Sbjct: 488 EQVAIVADARNYVSALIVPAFEALNTWAKAQGIHVENPIELLRHSQV 534
>gi|404259764|ref|ZP_10963070.1| putative fatty-acid--CoA ligase [Gordonia namibiensis NBRC 108229]
gi|403401736|dbj|GAC01480.1| putative fatty-acid--CoA ligase [Gordonia namibiensis NBRC 108229]
Length = 612
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 205/411 (49%), Gaps = 49/411 (11%)
Query: 19 YETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHV 78
++ + +D+AT +YTSGTTG PKGV +TH+N++ ++ +L + + D+ +S LP H+
Sbjct: 172 WQAVEPEDLATLIYTSGTTGPPKGVEITHRNIVAEMAALAEKLEVGFDDRAISYLPAAHI 231
Query: 79 YERACGYFI-FSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
+R + RGI++ R + L P + VP V++ + +GI+ ++ S
Sbjct: 232 ADRVSSHAANMMRGIQITTVPDPREIAAALPDVHPTFFFGVPRVWQKIRAGIEAKLAEES 291
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
+ V +AL +F A + A ID ++ + H
Sbjct: 292 SP---VKKALAGWAFGVGA-----------------ANAQARIDGKGTGLLGGVQ---HG 328
Query: 197 LAEKLVYKKIQSAIGISKAGVSGGGS--LPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
LA+KLV K+++A+G+ + +G G+ +P + F+ +G+ V +G++E++ V
Sbjct: 329 LADKLVLHKVRAALGLDEVSFAGSGAAAIPPEVLKFFLGLGIPVLEVWGMSETTGVSTMT 388
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
P +G+VG P+ E+K+ + G + VRG VM+GY K P T + +
Sbjct: 389 TPDNLRVGTVGSPVRGMEVKLA-----------ADGELLVRGPVVMRGYRKQPEKTAETI 437
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA-ALR 373
D +GWL+TGDI I G V +++ R K+ I+ +G+N+ P +E A
Sbjct: 438 DAEGWLSTGDIATI---------DDDGNVTIVD-RKKELIINESGKNMSPTNIENAMKAA 487
Query: 374 SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 424
SSLI Q+V IG + A++V D E V M A +L + AD ELS I
Sbjct: 488 SSLISQVVAIGDAKPYVSALVVLDPEAVAMRANKLDMPGADLVELSAHPEI 538
>gi|254508749|ref|ZP_05120862.1| long-chain acyl-CoA synthetase [Vibrio parahaemolyticus 16]
gi|219548328|gb|EED25340.1| long-chain acyl-CoA synthetase [Vibrio parahaemolyticus 16]
Length = 602
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 129/430 (30%), Positives = 199/430 (46%), Gaps = 55/430 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+ T +YTSGTTG PKGVML + N+ Q+ + D L LP HV+ERA
Sbjct: 178 DDLLTLIYTSGTTGQPKGVMLDYANIGAQLEGHDQRLSLTEDDVSLCFLPLSHVFERAWT 237
Query: 85 YFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
+++ +G Y ++D L +P M +VP YE ++S I +++ + R+V+
Sbjct: 238 FYVLYKGATNCYLQDTMQVRDALSEVRPTVMSAVPRFYEKIFSAIHEKVAKAPFIRKVM- 296
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
F + C +K PS L + LA+KLV
Sbjct: 297 -------FTWAVNMGAKMAVCHQEGRK-PSL---------------ALKKAYKLADKLVL 333
Query: 204 KKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K+++ +G + GG L I F+ AIG+ V++GYG+TE++ I+ C
Sbjct: 334 SKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATISCWDDQCFNPD 393
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G + ++KI E NE+L VRG VM+GY+K P T + DE G+L T
Sbjct: 394 SIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETAKTFDEHGFLKT 442
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD G I + G L + R K+ + S G+ + P +E + I QI V
Sbjct: 443 GDAGHIDEN----------GNLFITDRIKELMKTSNGKYIAPQMVEGTIGKDHFIEQIAV 492
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 434
I ++ A+IVP + + AK L+I + D EL K E+ ++ L EL K+
Sbjct: 493 IADTRKFVSALIVPCFDSLEEYAKELNIKYHDRVELIKHHQIVEMLEQRVNDLQKELAKF 552
Query: 435 TSKCSFQIGP 444
F++ P
Sbjct: 553 EQVKKFKLLP 562
>gi|424039094|ref|ZP_17777540.1| AMP-binding enzyme family protein, partial [Vibrio cholerae
HENC-02]
gi|408893373|gb|EKM30590.1| AMP-binding enzyme family protein, partial [Vibrio cholerae
HENC-02]
Length = 525
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 192/399 (48%), Gaps = 47/399 (11%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ E +D+ T +YTSGTTG PKGVML + N+ Q+ + + D L LP H
Sbjct: 171 RLEHAQEEDLLTLIYTSGTTGQPKGVMLDYANISAQLEGHDERLSLTEDDVSLCFLPLSH 230
Query: 78 VYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ERA +++ +G Y ++D L +P M +VP YE ++S I +++ +
Sbjct: 231 VFERAWTFYVLYKGGTNCYLQDTMQVRDALSEVRPTVMSAVPRFYEKIFSAIHEKVSRAP 290
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
R+++ + + A C N+K PS + L +
Sbjct: 291 FHRKIMFTWAVNMGAKMAA--------CHQENRK-PSLM---------------LRKSYA 326
Query: 197 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 327 LADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWD 386
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
C S+G + ++KI E NE+L VRG VM+GY+K P T++ D
Sbjct: 387 DQCFDPSSIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETEKTFD 435
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
E G+L TGD G+I + G L + R K+ + S G+ + P +E A +
Sbjct: 436 EHGFLKTGDAGYIDEN----------GNLFITDRIKELMKTSNGKYIAPQVVEGAIGKDH 485
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 414
I QI VI ++ A+IVP + + AK L+I + D
Sbjct: 486 FIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHD 524
>gi|269956791|ref|YP_003326580.1| AMP-dependent synthetase and ligase [Xylanimonas cellulosilytica
DSM 15894]
gi|269305472|gb|ACZ31022.1| AMP-dependent synthetase and ligase [Xylanimonas cellulosilytica
DSM 15894]
Length = 606
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 126/380 (33%), Positives = 185/380 (48%), Gaps = 53/380 (13%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP---AENGDKFLSMLPPWHVYER 81
DDIAT +YTSGTTG PKG LTH+N + + VP A G + L LP HV+ R
Sbjct: 178 DDIATIIYTSGTTGRPKGAELTHRNFVSLTTNTVPEVPEVFAAPGGRTLLFLPLAHVFAR 237
Query: 82 ACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
G L ++ +R L DDL ++P Y+++VP V+E +Y +SA +
Sbjct: 238 FVEVLAIRSGTVLAHSPDIRTLVDDLGAFRPTYILAVPRVFEKVY---------NSAEQT 288
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
A ++I F + A I L K PS WL + H +A+
Sbjct: 289 AAAGGKLKI-FRWAAATAIRWSRALD-TAKGPSA------WLSVQ---------HKVADA 331
Query: 201 LVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LVY K+++ + G ++ VSGGG L + FY IG+ V GYGLTE++ RP
Sbjct: 332 LVYGKLRAKLGGQTRYAVSGGGPLGERLGHFYRGIGLTVLEGYGLTETTAPTCVNRPAAL 391
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
+G+VG + ++I A E+L ++G V +GY NP AT +A D + W
Sbjct: 392 RIGTVGLQLPGCGVRI--APDGEIL---------LKGHHVFRGYHNNPQATAEAFDGE-W 439
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
TGD+G + G L + GR K+ IV + G+NV P LE+ +L+ Q
Sbjct: 440 FRTGDLGSLDDE----------GFLRITGRKKEIIVTAAGKNVAPAVLEDRLRAHALVSQ 489
Query: 380 IVVIGQDQRRPGAIIVPDKE 399
VV+G ++ GA++ D E
Sbjct: 490 CVVVGDNRPFIGALVTLDPE 509
>gi|410895205|ref|XP_003961090.1| PREDICTED: long-chain-fatty-acid--CoA ligase 5-like isoform 2
[Takifugu rubripes]
Length = 689
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 132/451 (29%), Positives = 207/451 (45%), Gaps = 68/451 (15%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQ-----------IRSLYDIVPAENGDKFLSML 73
DD++ +TSGTTGNPKG MLTH+N++ + + IVP+ D +S L
Sbjct: 254 DDLSIICFTSGTTGNPKGAMLTHENVVSDAAGVLKGFETCVLTQTTIVPSTE-DVTISFL 312
Query: 74 PPWHVYERACGYFIFSRG--IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P H++ER I+ G + +R L DD++ QP VP + +Y +Q
Sbjct: 313 PLAHMFERVVQTVIYGAGGRVGFFQGDIRLLPDDMKTLQPTIFPVVPRLLNRVYDKVQ-- 370
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
S A + FK+ F + R + + + LW
Sbjct: 371 ------------------SGAKSPFKKWLLNFAVDRKYAEVKEGIVRNNSLW-------- 404
Query: 192 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI-GVKVQVGYGLTESSP 249
+KL++ K+Q+++G + V+G + ++ F A+ G ++ GYG TE +
Sbjct: 405 -------DKLIFNKVQASLGGRVRVMVTGAAPISPNVLTFLRAVLGCQIFEGYGQTECTA 457
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
P G VG P+ +K+VD E + +G V ++G V +GY K+P
Sbjct: 458 GCTFTMPGDATAGHVGAPLPCNIVKLVDVEEMNYFASNGEGEVCIKGKNVFKGYLKDPEK 517
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T +ALD+DGWL+TGDIG P GVL + R K+ L+ GE + P ++E
Sbjct: 518 TAEALDDDGWLHTGDIGKWLPS----------GVLKIIDRKKNIFKLAQGEYIAPEKIEN 567
Query: 370 AALRSSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK----EKTI 424
+RS L+ Q+ V G Q A+++PD E++ AK+L V EL K +K I
Sbjct: 568 VYVRSGLVAQVFVHGDSLQSCLVAVVIPDPEDLPSFAKKLG-VQGSLKELCKNTEIKKAI 626
Query: 425 SLLYGELRKWTSKCSF-QIGPIHVVDEPFTV 454
+L K SF Q+ I++ E FT+
Sbjct: 627 LSDMTKLGKEAGLKSFEQVKDIYLHPEQFTI 657
>gi|387790007|ref|YP_006255072.1| AMP-forming long-chain acyl-CoA synthetase [Solitalea canadensis
DSM 3403]
gi|379652840|gb|AFD05896.1| AMP-forming long-chain acyl-CoA synthetase [Solitalea canadensis
DSM 3403]
Length = 637
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 202/402 (50%), Gaps = 70/402 (17%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHV 78
E + +D+++ +YTSGTTG PKG MLTH N + +++ + +P D FLS LP HV
Sbjct: 185 EMVQPEDLSSLIYTSGTTGTPKGAMLTHYNFVSNVKACLEQIPGIVPEDVFLSFLPLSHV 244
Query: 79 YERACGYFI---------FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQ 129
+ER Y + F++ +EL L ++ +P M VP + E + +
Sbjct: 245 FERTATYHVCCTVGSSIAFAQSLEL-------LGKNMMEVKPTIMSVVPRLLERI---TE 294
Query: 130 KQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICA 189
K + + ++A ++ + +A+ K + R +++ +
Sbjct: 295 KAVKSGTSAGGFKSKIFL---WAFEVGKEV-------RQKREAG--------------SS 330
Query: 190 ILWPLHL---LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 245
+ +PL + LAEKLV+ KI+ G + K +SGG +LP ++ F+ +G+K+ GYGLT
Sbjct: 331 VGFPLSVKATLAEKLVFSKIKEKTGGNLKFMISGGAALPKNVGEFFGNLGIKILEGYGLT 390
Query: 246 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA-----------GSKGIVKV 294
E++PV+A V+G+VG I + I + +T E++ ++G + V
Sbjct: 391 ETAPVMAVTEFHRQVIGTVGRIIPGIVVAIQNTDTKEIVTKQTHESFDPNFESAEGEIIV 450
Query: 295 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 354
+G VM+GY+ P TK +D +GW +TGD+G + G L + R K+ +
Sbjct: 451 KGHCVMKGYWNQPEETKFVIDNEGWFHTGDVG-----------KFNKGNLQITDRIKNIL 499
Query: 355 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 396
+ S G+N+ P ++E L+S+ I QI +IG + AI+VP
Sbjct: 500 INSYGKNIYPTQVENIYLKSTRIEQIFLIGDKRDYLTAIVVP 541
>gi|441516134|ref|ZP_20997885.1| long-chain fatty-acid--CoA ligase [Gordonia hirsuta DSM 44140 =
NBRC 16056]
gi|441457005|dbj|GAC55846.1| long-chain fatty-acid--CoA ligase [Gordonia hirsuta DSM 44140 =
NBRC 16056]
Length = 603
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/390 (31%), Positives = 189/390 (48%), Gaps = 54/390 (13%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE---NGDKFLSMLP 74
+ ++ +D AT +YTSGTTG PKGVML H NLL ++ + D A+ G + L LP
Sbjct: 175 RRRSLRADSPATLIYTSGTTGRPKGVMLYHSNLLGEVGGVLDSSLADLLGPGKRLLLFLP 234
Query: 75 PWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 133
HV R G+ + YTA + NL + ++P ++SVP V+E +Y+ +++ +
Sbjct: 235 MAHVLARGVNLIAIEAGVAVGYTADIANLLPTFEVFRPSLILSVPRVFEKVYNSARQKAY 294
Query: 134 TSSAAR-RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
S + ++ RA A TA + Y AL D + +L
Sbjct: 295 DDSPVKGKIFDRA------ATTAIQ----------------YSKALDDG----SVGKVLQ 328
Query: 193 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
H L ++LVY K+ +A+G + +SGG L + F+ +G+ V GYGLTE++ I
Sbjct: 329 LRHKLYDRLVYSKLTAALGGQCELAISGGAPLGARLGHFFRGVGIPVYEGYGLTETTAAI 388
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 311
P +G+VG PI ++I G V + G+ V GY++N AT
Sbjct: 389 TVNTPAEVRMGTVGRPIPGNAVRIA-----------PDGEVMLNGAVVFGGYWRNDEATA 437
Query: 312 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 371
+A+ DGW +TGD+G S G L + GR K+ IV + G+NV P LE+
Sbjct: 438 EAI-TDGWFHTGDLG----------SLDEDGFLRITGRKKEIIVTAGGKNVSPAPLEDIM 486
Query: 372 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 401
+I Q +V+G + G +I D E++
Sbjct: 487 RAHPMISQAMVVGDKEPFIGTLITLDAEQI 516
>gi|313204617|ref|YP_004043274.1| amp-dependent synthetase and ligase [Paludibacter propionicigenes
WB4]
gi|312443933|gb|ADQ80289.1| AMP-dependent synthetase and ligase [Paludibacter propionicigenes
WB4]
Length = 600
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 201/437 (45%), Gaps = 63/437 (14%)
Query: 1 MLFSLPILTPVIAGKHY----KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL-----L 51
M +S +L + KH+ ++ D+A +YTSGTTGNPKGVM+ H +
Sbjct: 151 MYYSDFLLIGEKSTKHFEVDHRHSETSESDLACILYTSGTTGNPKGVMMPHSCFTEAMRI 210
Query: 52 HQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVR--NLKDDLQRY 109
H IR + + D ++ LP HV+ER YF +G+ + Y +R ++ ++
Sbjct: 211 HNIR----LTSITDKDTSIAFLPLSHVFERTWCYFCIFKGVTI-YINLRPTEIQQTIKDV 265
Query: 110 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 169
P M +VP +E +Y+G+++ + S V I++A KR + R
Sbjct: 266 HPTLMCAVPRFWEKVYAGVKENLSKYSPIMLGV------IAWAVATGKR--HNVDILRKG 317
Query: 170 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHI 227
KQP + + +A+KL++ K++ +GI A + + G L I
Sbjct: 318 KQPDVFLKF---------------GYSIADKLIFSKVKETLGIENANMLPTAGAKLSDEI 362
Query: 228 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 287
LF+ +IGV + GYGLTES+ + +G+VG+ + +KI D NE+L
Sbjct: 363 ALFFRSIGVPIVYGYGLTESTATVCCYEYVGYEIGTVGNIMPDVSVKIGD--DNEIL--- 417
Query: 288 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 347
++G + GY+ NP A + EDGW TGD G+I + +VL
Sbjct: 418 ------LKGKTIFPGYYNNPEANAASFTEDGWFKTGDAGYIKDNK-----------IVLT 460
Query: 348 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 407
R KD S G+ + P E+E I Q+ VIG ++ AII P+ + A++
Sbjct: 461 ERIKDLFKTSNGKYIAPQEIETRLALDKYIEQVAVIGDERNYVTAIIAPNIPALEEYAQK 520
Query: 408 LSIVHADASELSKEKTI 424
SI + + +L K I
Sbjct: 521 HSITYENIDDLLKSPKI 537
>gi|390949390|ref|YP_006413149.1| AMP-forming long-chain acyl-CoA synthetase [Thiocystis violascens
DSM 198]
gi|390425959|gb|AFL73024.1| AMP-forming long-chain acyl-CoA synthetase [Thiocystis violascens
DSM 198]
Length = 608
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 123/401 (30%), Positives = 191/401 (47%), Gaps = 48/401 (11%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG- 84
D+AT VYTSGTTG PKGVML+H ++L + +V ++ D FLS LP H +ER G
Sbjct: 188 DLATIVYTSGTTGRPKGVMLSHFSILWNAEAQLKMVLTDHDDIFLSFLPLSHTFERTVGY 247
Query: 85 YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
YF G + Y ++++L++DL +P +ISVP +YE Y+ IQ+++ + +
Sbjct: 248 YFPMMAGSCVAYARSLQDLREDLLTIRPTVLISVPRIYERAYARIQEKLAEDGRLAQWLF 307
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
+ + +A F + + P + + L L LV
Sbjct: 308 SQAVELGWAR---------FLAGQGRGDPPGRLDRL--------------LWRLLRPLVA 344
Query: 204 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K+ + +G + +SG L + + +G+ + GYGLTES+P IA NV G
Sbjct: 345 DKVLARLGGRLRIAISGAAPLRAEVARCFIGLGLNLLEGYGLTESAPTIAGNPAEDNVPG 404
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S G PI EI+I D G + RG VM GY+K P T+ ++ DGWL+T
Sbjct: 405 SAGVPIPGMEIRIAD-----------NGELLARGPSVMLGYWKRPEETRTMIEPDGWLHT 453
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD+ + H L + GR KD +V+STGE V +LE L Q +V
Sbjct: 454 GDLAEMRDGH-----------LFIRGRLKDILVMSTGEKVPAGDLERTILEDPWFEQALV 502
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKT 423
+G+ + A++V +++ A LS+ D L ++
Sbjct: 503 LGEGRPFVAALLVLERQAWSALAASLSLDADDEGSLGDKRA 543
>gi|68535669|ref|YP_250374.1| acyl-CoA synthetase [Corynebacterium jeikeium K411]
gi|68263268|emb|CAI36756.1| acyl-CoA synthetase [Corynebacterium jeikeium K411]
Length = 612
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 183/380 (48%), Gaps = 50/380 (13%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI---VPAENGDKFLSMLPPWHVYER 81
DD+A+ VYTSGTTG PKG LTH N L + R++ A G + L+ LP HV+ R
Sbjct: 188 DDVASIVYTSGTTGRPKGCKLTHHNWLAEARAILTHPVGRAAAFGYRKLTFLPLAHVFSR 247
Query: 82 ACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
A + G + ++ + L + QR +P+ + SVP ++E +++G++ + +
Sbjct: 248 AMAHAATVGGATQTHWSDMSTLVAEFQRTKPNLICSVPRIFEKVHAGVKSKATDGGGVKA 307
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+ R + Y+ EG L + ID + +K
Sbjct: 308 KIFNFAERAAVDYSKALDTDEGPSLKQK----------ID--------------RAIGDK 343
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LVY K++ A+G +SGG +L + F+ +GV + GYGLTE + N
Sbjct: 344 LVYSKVREAMGGELDYAISGGSALNPELMHFFRGVGVNLYEGYGLTECTAAACTNFAPDN 403
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
++G+VG P+ +KI D G + ++G V GY++N AT ++ EDG+
Sbjct: 404 IIGTVGRPLGGITVKIAD-----------DGEILLKGDMVFAGYWENEEATAESFTEDGF 452
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
TGD+G + P G L + GR K+ IV + G+NV P +E+ + LI Q
Sbjct: 453 YRTGDLGKLLPT----------GHLKITGRKKEIIVTAGGKNVSPGPMEDILRSAPLISQ 502
Query: 380 IVVIGQDQRRPGAIIVPDKE 399
+V+G DQ+ GA+I D+E
Sbjct: 503 AMVVGDDQKFVGALISLDEE 522
>gi|423204014|ref|ZP_17190570.1| hypothetical protein HMPREF1168_00205 [Aeromonas veronii AMC34]
gi|404628008|gb|EKB24796.1| hypothetical protein HMPREF1168_00205 [Aeromonas veronii AMC34]
Length = 596
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 124/430 (28%), Positives = 205/430 (47%), Gaps = 55/430 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+ T +YTSGTTG PKGVML N+ + D L MLP HV+ERA
Sbjct: 176 DDLLTLIYTSGTTGEPKGVMLDFSNIAACFEMHNSRLDLNEQDVSLCMLPLSHVFERAWS 235
Query: 85 YFIFSRGIELMYTAV-RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
Y++ G E +Y + + D + QP M +VP +YE Y+ IQ ++ + A RR +
Sbjct: 236 YYVLYCGAENVYIRDPQKVMDVIGEVQPTVMCAVPRLYEKAYAMIQAKVAQAPALRRAL- 294
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
F + ++ + TR + + + ++ + LW LAE+LV+
Sbjct: 295 -------FGWAT--KVGKQMIATRQAGKTA----------SPLLYSQLW----LAERLVF 331
Query: 204 KKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
+K+++ G ++ G L ++LF++A+G+ ++ GYG+TE++ + + LG
Sbjct: 332 RKLRARFGGRTRFLPVAGARLADDVNLFFQAMGLNLKYGYGMTETTATVCCYEDSQFKLG 391
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G +N E+K+ E NE+L VR VM+GY+ P AT + + EDG+L T
Sbjct: 392 SIGTALNGIEVKL--GENNELL---------VRSPTVMRGYYNKPDATAEVMTEDGFLRT 440
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD G + C G + R K+ + S G+ V P +E + I QI +
Sbjct: 441 GDAGELD----------CQGNIYFTERLKELMKTSNGKYVAPQLVEGTIGKDRFIEQIAI 490
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 434
+ + A+IVP E + A+ +++ + +EL + E I+ L EL K+
Sbjct: 491 VADARHFVSALIVPCFESLEEYARSINLQYQCKTELLRHSRVMEFFEARIADLQKELAKF 550
Query: 435 TSKCSFQIGP 444
F + P
Sbjct: 551 EQVKKFTLLP 560
>gi|226939644|ref|YP_002794717.1| long chain fatty-acid CoA ligase [Laribacter hongkongensis HLHK9]
gi|226714570|gb|ACO73708.1| Probable long chain fatty-acid CoA ligase [Laribacter hongkongensis
HLHK9]
Length = 588
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 132/445 (29%), Positives = 221/445 (49%), Gaps = 59/445 (13%)
Query: 20 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV-PAENGD-KFLSMLPPWH 77
+++ DD+ T +YTSGTTG PKGVML+H+N++ Q+ ++ V P G + +S LP H
Sbjct: 163 DSVRPDDLLTIIYTSGTTGRPKGVMLSHRNVVSQVEAVCRFVKPLVPGQWRTVSFLPLSH 222
Query: 78 VYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ER YF S G+ + Y + + LQ P +VP + E +Y ++ + S
Sbjct: 223 VFERTACYFYISAGVSIYYAKSMDVIAASLQDVHPQMFTTVPRLLEKVY----EKFVSKS 278
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
+ V R L Y A R E F P L AL +
Sbjct: 279 HELKGVTRKL------YEAALRFAESF---EPNTPPKGLAAL---------------QYK 314
Query: 197 LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
L +KLVY K ++A+G + V G +L + + A G+ V GYG+TES+PV+ +
Sbjct: 315 LYDKLVYSKWRAAMGNEVQVIVVGSAALQPRLARVFWAAGIMVTEGYGMTESAPVLTGNQ 374
Query: 256 PTCNV--LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 313
+ +G+VG P+++ EI+I AE E+L RG VM GY+K+ T++
Sbjct: 375 LDADQVDIGTVGIPLDNVEIRI--AEDGEIL---------ARGPNVMMGYYKDEEMTRET 423
Query: 314 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 373
L +DGWL+TGD+G I ++RG R + R K+ S G+ V P +E
Sbjct: 424 L-KDGWLHTGDVGEI---NARGNLR-------ITDRKKEMFKTSCGKYVAPQVIENKLKE 472
Query: 374 SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGELR 432
S+ I Q++V+G ++ A++VP ++V + + + ++A S K L+ E++
Sbjct: 473 SAYIDQVMVVGDGRKYASALVVPLFDQVRAWCSQQGLQIKSEAEMASHPKVRELIEHEVK 532
Query: 433 KWTSKCSF--QIGPIHVVDEPFTVN 455
++ Q+ + +V+ P++++
Sbjct: 533 RFNRLFGSWEQVKKVALVERPWSID 557
>gi|325962926|ref|YP_004240832.1| AMP-forming long-chain acyl-CoA synthetase [Arthrobacter
phenanthrenivorans Sphe3]
gi|323469013|gb|ADX72698.1| AMP-forming long-chain acyl-CoA synthetase [Arthrobacter
phenanthrenivorans Sphe3]
Length = 602
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 122/379 (32%), Positives = 184/379 (48%), Gaps = 55/379 (14%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA---ENGDKFLSMLPPWHVYERA 82
D AT +YTSGTTG PKG LTH N + + I+ EN K + LP HV+ R
Sbjct: 182 DTATIIYTSGTTGRPKGCELTHGNFVELSDNALAIIGEIVHENA-KTIMFLPLAHVFARF 240
Query: 83 CGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
+ G + +T ++NL DLQ Y+P ++++VP V+E +Y+ +
Sbjct: 241 ISVLAMAAGTTVAHTPDIKNLLADLQSYEPTFILAVPRVFEKVYNSALTKAEDG------ 294
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
+ I A TA F R + + + L H L +KL
Sbjct: 295 -GKGAIFHKAADTAI-----AFSKARQEGRVGLGLKL---------------RHALFDKL 333
Query: 202 VYKKIQSAIGISKA-GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
VY K+++A+G A VSGGG L + F++ IG++V GYGLTE++ I+ P+
Sbjct: 334 VYGKLRAAMGGHVAHAVSGGGPLGERLGHFFQGIGLQVLEGYGLTETTAPISVNTPSLIK 393
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
+GSVG P+ +KI S G + +G VM+GY+K P T + D DGW
Sbjct: 394 IGSVGKPLPGNAVKIA-----------SDGEILAKGVCVMRGYYKRPDLTAETFD-DGWF 441
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
TGDIG + G + + GR K+ IV + G+NV P LE+ +L+ Q+
Sbjct: 442 RTGDIGRLDED----------GFVWITGRKKEIIVTAGGKNVIPALLEDQIRADALVSQV 491
Query: 381 VVIGQDQRRPGAIIVPDKE 399
+V+G ++ GA+I D+E
Sbjct: 492 LVVGDNRPFIGALITLDQE 510
>gi|405373569|ref|ZP_11028309.1| Long-chain-fatty-acid--CoA ligase [Chondromyces apiculatus DSM 436]
gi|397087523|gb|EJJ18562.1| Long-chain-fatty-acid--CoA ligase [Myxococcus sp. (contaminant ex
DSM 436)]
Length = 622
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 187/384 (48%), Gaps = 56/384 (14%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ + DD A +YTSGTTG+PKGV+LTH+N + ++ + GD + LP H
Sbjct: 190 RVNAVSMDDTAALIYTSGTTGDPKGVILTHRNWAFEAKAAQSVGMMAPGDSVMLFLPLAH 249
Query: 78 VYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ + S G L+ +V L +L +P + SVP V+E +Y+ + + S
Sbjct: 250 VFAQVVKASWLSMGYRLIIAESVEKLLANLVETRPTVLPSVPRVFEKVYNNV---VANGS 306
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
+A + R L R +F ++++ + R+Q + +
Sbjct: 307 SAPGLKGR-LFRWAF------KLFDEYVEARSQGREYSSLGFA----------------- 342
Query: 197 LAEKLVYKKIQSAIGISKAG-----VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
LA+KLV+ K+++AI G +SGG L I F++ +G+KV GYGLTE+S
Sbjct: 343 LAKKLVFAKVRAAISEKLGGNMRLFISGGAPLSPKIGYFFDLLGLKVLEGYGLTETSAGS 402
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 311
R +G+VG P+ +++I S G + +RG VM+GY+KNP AT
Sbjct: 403 TVNREHKIKIGTVGAPMPGLDVQI-----------ASDGEILIRGPSVMKGYYKNPEATA 451
Query: 312 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 371
+A+D DGW +TGDIG + + L + R KD IV + G+NV P LE +
Sbjct: 452 EAIDADGWFHTGDIGELDSDN----------YLRITDRKKDIIVTAGGKNVAPQNLENSL 501
Query: 372 LRSSLIRQIVVIGQDQRRPGAIIV 395
+I Q VV G +RP +++
Sbjct: 502 KTHPIISQAVVTG--DKRPYLVVL 523
>gi|296453576|ref|YP_003660719.1| AMP-dependent synthetase and ligase [Bifidobacterium longum subsp.
longum JDM301]
gi|296183007|gb|ADG99888.1| AMP-dependent synthetase and ligase [Bifidobacterium longum subsp.
longum JDM301]
Length = 607
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 190/394 (48%), Gaps = 57/394 (14%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH----QIRSLYDIVPAENGDKFLSML 73
+ T+ +DD+AT VYTSG+TGNPKG LTHKN + ++L+++V ++ + L L
Sbjct: 175 RVATVRADDLATIVYTSGSTGNPKGAELTHKNFVSITITASQALHEVV-LDDHPRLLLFL 233
Query: 74 PPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 131
P H + R Y + G+ + L DL+ ++P Y++ VP V+E +Y+ +
Sbjct: 234 PLAHCFARFIQYASIASDDGVVGYLPDTKTLLPDLRSFEPTYLLGVPRVFEKVYNAASHK 293
Query: 132 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 191
R V A + ++ ++ E ++ Y
Sbjct: 294 AGAGWKGRLFVKAA--EAARVWSRKEQAGEQHTFAEIAERAKY----------------- 334
Query: 192 WPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGYGLTESSP 249
E LVY+ ++ A+G V+ GG+ P+ +DL FY IG+ + GYG+TE++
Sbjct: 335 -------ETLVYRTVRGALGPKIKYVACGGA-PLSLDLAHFYNGIGLPMIQGYGMTETAA 386
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
AA R T NV+G+VG P + I+I D +G ++V+G V +GY P
Sbjct: 387 PFAATRVTDNVIGTVGQPAPGSSIRISD-----------EGELQVKGPNVFRGYHNLPEK 435
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T +A DGWL TGD+ I G +++ GR KD I+ + G+NV P+ LEE
Sbjct: 436 TAEAFTADGWLRTGDLAEIDD----------AGRIIITGRIKDIIITAGGKNVSPIPLEE 485
Query: 370 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 403
+ ++ VV+G + GA++ D E + +
Sbjct: 486 EIAKCPIVEHCVVVGDQRPFIGALVTLDPESLAI 519
>gi|260578257|ref|ZP_05846173.1| long-chain-fatty-acid--CoA ligase [Corynebacterium jeikeium ATCC
43734]
gi|258603559|gb|EEW16820.1| long-chain-fatty-acid--CoA ligase [Corynebacterium jeikeium ATCC
43734]
Length = 618
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 187/388 (48%), Gaps = 54/388 (13%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI---VPAENGDKFLSMLPPWHVYER 81
DD+A+ VYTSGTTG PKG LTH N L + R++ A G + L+ LP HV+ R
Sbjct: 194 DDVASIVYTSGTTGRPKGCKLTHHNWLAEARAILTHPVGRAAAFGYRKLTFLPLAHVFSR 253
Query: 82 ACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
A + G + ++ + L + QR +P+ + SVP ++E +++G++ + +
Sbjct: 254 AMAHAATVGGATQTHWSDMSTLVAEFQRTKPNLICSVPRIFEKVHAGVKAKATDGGGVKA 313
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+ R + Y+ EG L + ID + +K
Sbjct: 314 KIFNFAERAAVDYSKALDTDEGPSLKQK----------ID--------------RAIGDK 349
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LVY K++ A+G +SGG +L + F+ +GV + GYGLTE + N
Sbjct: 350 LVYSKVREAMGGELDYAISGGSALNPELMHFFRGVGVNLYEGYGLTECTAAACTNFAPDN 409
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
++G+VG P+ +KI D G + ++G V GY++N AT ++ EDG+
Sbjct: 410 IIGTVGRPLGGITVKIAD-----------DGEILLKGDMVFAGYWENEEATAESFTEDGF 458
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
TGD+G + P G L + GR K+ IV + G+NV P +E+ + LI Q
Sbjct: 459 YRTGDLGKLLPT----------GHLKITGRKKEIIVTAGGKNVSPGPMEDILRSAPLISQ 508
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKR 407
+V+G DQ+ GA+I D+E AAK+
Sbjct: 509 AMVVGDDQKFVGALISLDEE----AAKK 532
>gi|72161435|ref|YP_289092.1| long-chain fatty-acid-CoA ligase [Thermobifida fusca YX]
gi|71915167|gb|AAZ55069.1| long-chain fatty-acid-CoA ligase [Thermobifida fusca YX]
Length = 598
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 127/394 (32%), Positives = 188/394 (47%), Gaps = 75/394 (19%)
Query: 23 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS-----LYDIVPAENGDKFLSMLPPWH 77
G DD+AT +YTSGTTG PKG LT +NL + S + D+ E G L LP H
Sbjct: 176 GLDDLATLIYTSGTTGRPKGCELTQRNLAFDVMSVNSGPMKDVFTME-GRSTLLFLPLAH 234
Query: 78 VYER----AC-------GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 126
R C G+F S G +L+ D L ++P ++++VP V+E +Y+
Sbjct: 235 SLARIIQVGCVETKTVMGHFP-STGPDLL--------DALASFRPMFLLAVPRVFEKVYN 285
Query: 127 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 186
+++ S + R + AY+ K + G L R+
Sbjct: 286 KAEQKAIASGKGD--IFRKAAETAIAYS--KALDTGKVS----------------LGLRL 325
Query: 187 ICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 245
A+ LVY+KI +A+G +K VSGG +L + F+ IG+ V GYGLT
Sbjct: 326 KRAVF-------SLLVYRKILAAVGGQAKYAVSGGSALGERLGHFFRGIGLTVLEGYGLT 378
Query: 246 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 305
E+S A P N +G+VG PI T I+I D G + V+G VM+GY+
Sbjct: 379 ETSAPTTANAPDTNKIGTVGRPIPGTSIRIAD-----------DGEILVKGDNVMRGYWN 427
Query: 306 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 365
NP ATK+A EDGW +GDIG + G L + GR K+ IV + G+NV P
Sbjct: 428 NPKATKEAFTEDGWYRSGDIGELDEE----------GFLRITGRKKEIIVTAGGKNVAPA 477
Query: 366 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
+E+ +++ Q +V+G +++ A+I D E
Sbjct: 478 VIEDRIRSHAIVSQCMVVGDNRKFVAALITIDPE 511
>gi|423223587|ref|ZP_17210056.1| hypothetical protein HMPREF1062_02242 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638212|gb|EIY32059.1| hypothetical protein HMPREF1062_02242 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 616
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 131/441 (29%), Positives = 209/441 (47%), Gaps = 58/441 (13%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM--LPPWHVYER 81
DD+A +YTSGTTG PKGVML H N + R ++DI + D+ +SM LP HV+E+
Sbjct: 194 DDDLANILYTSGTTGEPKGVMLHHSNYMEAFR-IHDIRLVDMTDQDISMNFLPLTHVFEK 252
Query: 82 ACGYFIFSRGIELMYTAVR--NLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
A Y +G+++ +R +++ ++ +P M SVP +E +Y+G+Q++I + +
Sbjct: 253 AWTYLCVHKGVQICIN-LRPVDIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKIAQETGLK 311
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + I++ +I+ R K P ++ L + E
Sbjct: 312 KAMMLDAIKVG-------KIH-NIDYLRKGKTPPLMLHL---------------KYKFYE 348
Query: 200 KLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
K VY ++ IGI + G ++P I F ++G+ + VGYGLTES+ ++
Sbjct: 349 KTVYALLKKTIGIENGNFFPTAGAAVPDEICEFVHSVGINMLVGYGLTESTATVSCFLNQ 408
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
+GSVG + E+KI D NE+L +RG + +GY+K AT A+D+D
Sbjct: 409 GYEIGSVGTVMPDVEVKIGDE--NEIL---------LRGKTITKGYYKKAEATAAAIDKD 457
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GW +TGD G++ G L L R KD S G+ V P LE I
Sbjct: 458 GWFHTGDAGYLK-----------GDQLYLTERIKDLFKTSNGKYVSPQALETKLAIDRYI 506
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 437
QI +I ++ A+IVP V AK I + + EL + I L+ R T +
Sbjct: 507 DQIAIIADQRKFVSALIVPVYGFVKDYAKEKGIEYKNMEELLQHPKILGLF-RARIDTLQ 565
Query: 438 CSF----QIGPIHVVDEPFTV 454
F Q+ ++ EPF++
Sbjct: 566 QQFAHYEQVKRFTLLPEPFSM 586
>gi|108759016|ref|YP_630755.1| long-chain-fatty-acid--CoA ligase [Myxococcus xanthus DK 1622]
gi|108462896|gb|ABF88081.1| putative long-chain-fatty-acid--CoA ligase [Myxococcus xanthus DK
1622]
Length = 604
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 202/435 (46%), Gaps = 45/435 (10%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG- 84
D+A +YTSGTTG PKGVML+H N+ + +++++ P D+ L+ LP HV+ +
Sbjct: 170 DLAGLIYTSGTTGQPKGVMLSHANIARNVSAMHEVFPMGTEDRSLAFLPWAHVFGQTVEL 229
Query: 85 YFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
+ + S G + + AV + D+L +P + SVP ++ +Y G+QK++ A + V
Sbjct: 230 HALLSMGASMAIAEAVEKIIDNLSEVKPTLLFSVPRIFNRIYDGLQKRM----AGEKAVT 285
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
R + A A +R L K +L H +K+V+
Sbjct: 286 RFMFHRGLAVAAQRR-----ALAEAGKS----------------SGLLDLQHAFFDKVVF 324
Query: 204 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K+++ G K SGG ++ + F + +G+ V GYGLTE+SP+ A P +G
Sbjct: 325 SKVRARFGGRLKYAFSGGSAISKEVAEFIDNLGITVYEGYGLTETSPIATANFPNNRKIG 384
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
SVG + ++I A T E ++G + V G VM GY+ P ++ +G T
Sbjct: 385 SVGKALPGIRVEIDTAATGEA----TQGEIVVHGHNVMMGYYNKPEENEKVFTGNGGFRT 440
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD+G++ P G L + GR K+ L G+ V P +E++ S+ I +V
Sbjct: 441 GDMGYLDPD----------GYLYITGRIKEQYKLENGKYVVPSPIEQSLALSTYIANALV 490
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE-LRKWTSKCSFQ 441
G ++ AIIV D + + A + EL K + LY E L ++T
Sbjct: 491 HGMNKPYNVAIIVVDVDTLKKWATEKGLDTTSMPELLKRPEVLQLYREQLNEFTRDVKGY 550
Query: 442 IGP--IHVVDEPFTV 454
P ++ E FTV
Sbjct: 551 ERPQRFLLISEDFTV 565
>gi|381165792|ref|ZP_09875019.1| AMP-dependent synthetase and ligase [Phaeospirillum molischianum
DSM 120]
gi|380685282|emb|CCG39831.1| AMP-dependent synthetase and ligase [Phaeospirillum molischianum
DSM 120]
Length = 612
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 146/465 (31%), Positives = 214/465 (46%), Gaps = 84/465 (18%)
Query: 13 AGKHYKYETIG--SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENG---- 66
A H + G D A ++TSGT G PKGVML+H +LH +V NG
Sbjct: 168 AEAHVRARVAGLRRDHTACIIHTSGTGGVPKGVMLSHGAILHNCYGAAVLVDDLNGGVHC 227
Query: 67 -DKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYET 123
+ FLS LP H YE G F+ S G + Y ++ +L ++ +P M +VP +Y++
Sbjct: 228 DEVFLSFLPLSHAYEHTAGLFLPISIGATIYYADSIEHLSANMLEVRPTIMTAVPRLYDS 287
Query: 124 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 183
+ I K + R+ + A + + +RI +G L +D L
Sbjct: 288 IRIRILKGLGKVGRLRQTLFHAALSL-----GERRIAQGGRL-----------GPLDSLA 331
Query: 184 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 242
R++ +++V KI+ G KA VSGG LP + F+ ++GV + GY
Sbjct: 332 DRVL-----------DRVVRDKIRDRFGGRLKAFVSGGAPLPPEVGRFFLSLGVTILQGY 380
Query: 243 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 302
G TE++PVI+ RP + SVG I EI+I + G + VRG VMQG
Sbjct: 381 GQTEAAPVISVNRPGRVRVESVGPVIEGVEIRIA-----------ADGEILVRGEMVMQG 429
Query: 303 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 362
Y+++P++T A+D DGWL+TGDIG I P G L + R KD IV S G+NV
Sbjct: 430 YWQDPASTAAAIDPDGWLHTGDIGVIDPD----------GNLRITDRKKDIIVNSGGDNV 479
Query: 363 EPLELEEAALRSSLIRQIVVIGQDQRRPG--AIIVPDKEEVLM----AAKRLSIVHADAS 416
P +E I Q +V G RRP A+IVPD + V A +R+ I H
Sbjct: 480 SPQRIECLLTLQPGIAQAMVHG--DRRPHLVALIVPDPDRVQALGAPARERVVIEH---- 533
Query: 417 ELSKEKTISLLYGELRKWTSKCSFQIGPIH------VVDEPFTVN 455
L E+ + + + P+ V+ EPF+V
Sbjct: 534 --------PRLKAEIAHAVEQVNAHLAPVERIRRFTVLAEPFSVE 570
>gi|224536543|ref|ZP_03677082.1| hypothetical protein BACCELL_01418 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521799|gb|EEF90904.1| hypothetical protein BACCELL_01418 [Bacteroides cellulosilyticus
DSM 14838]
Length = 604
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 131/441 (29%), Positives = 211/441 (47%), Gaps = 58/441 (13%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM--LPPWHVYER 81
DD+A +YTSGTTG PKGVML H N + R ++DI + D+ +SM LP HV+E+
Sbjct: 182 DDDLANILYTSGTTGEPKGVMLHHSNYMEAFR-IHDIRLVDMSDQDVSMNFLPLTHVFEK 240
Query: 82 ACGYFIFSRGIELMYTAVR--NLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
A Y +G+++ +R +++ ++ +P M SVP +E +Y+G+Q++I + +
Sbjct: 241 AWTYLCIHKGVQICIN-LRPVDIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKIAQETGLK 299
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ + I++ +I+ L + + P L++ L + E
Sbjct: 300 KAMMLDAIKVG-------KIHNIDYLRKGKTPP-----LMNQLKYK-----------FYE 336
Query: 200 KLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
K VY ++ IGI + G ++P I F ++G+ + VGYGLTES+ ++
Sbjct: 337 KTVYALLKKTIGIENGNFFPTAGAAVPDEICEFVHSVGINMLVGYGLTESTATVSCFLNQ 396
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
+GSVG + E+KI D NE+L +RG + +GY+K AT A+D+D
Sbjct: 397 GYEIGSVGTVMPDVEVKIGDE--NEIL---------LRGKTITKGYYKKAEATAAAIDKD 445
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GW +TGD G++ G L L R KD S G+ V P LE I
Sbjct: 446 GWFHTGDAGYLK-----------GDQLYLTERIKDLFKTSNGKYVSPQALETKLAIDRYI 494
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 437
QI +I ++ A+IVP V AK I + + EL + I L+ R T +
Sbjct: 495 DQIAIIADQRKFVSALIVPVYGFVKDYAKEKGIEYKNMEELLQHPKILGLF-RARIDTLQ 553
Query: 438 CSF----QIGPIHVVDEPFTV 454
F Q+ ++ EPF++
Sbjct: 554 QQFAHYEQVKRFTLLPEPFSM 574
>gi|343508946|ref|ZP_08746243.1| putative long-chain-fatty-acid-CoA ligase [Vibrio scophthalmi LMG
19158]
gi|342806012|gb|EGU41253.1| putative long-chain-fatty-acid-CoA ligase [Vibrio scophthalmi LMG
19158]
Length = 602
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 127/424 (29%), Positives = 200/424 (47%), Gaps = 55/424 (12%)
Query: 31 VYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSR 90
+YTSGTTG PKGVML + N+ Q++ + + D L LP HV+ERA +++ R
Sbjct: 184 IYTSGTTGQPKGVMLDYANIGAQLQGHDQRLSLTDQDVSLCFLPLSHVFERAWTFYVLYR 243
Query: 91 GIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRI 149
G Y ++D L +P M +VP YE ++S I +++ + R+V+
Sbjct: 244 GATNCYLQDTMQVRDALSEIRPTVMSAVPRFYEKIFSAIHEKVAKAPFIRKVL------- 296
Query: 150 SFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSA 209
F + C ++ ++PS + L + LA+KLV K+++
Sbjct: 297 -FTWAVNMGAKMAVC-HQDGRKPSLM---------------LKKSYKLADKLVLSKLRAL 339
Query: 210 IGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPI 268
+G + GG L I F+ AIG+ V++GYG+TE++ ++ C S+G +
Sbjct: 340 LGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDKCFDPASIGMSM 399
Query: 269 NHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWI 328
++KI E NE+L VRG VM+GY+K P T Q DE G+L TGD G I
Sbjct: 400 PGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETAQTFDEHGFLKTGDAGHI 448
Query: 329 APHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQR 388
+ G L + R K+ + S G+ + P +E A + I QI VI ++
Sbjct: 449 DEN----------GNLFITDRIKELMKTSNGKYIAPQVVEGAIGKDHFIEQIAVIADTRK 498
Query: 389 RPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWTSKCSF 440
A+IVP + + AK L+I + D EL K E ++ L EL K+ F
Sbjct: 499 FVSALIVPCFDSLEEYAKELNIKYHDRVELIKHHQIVEMLESRVNDLQKELAKFEQVKKF 558
Query: 441 QIGP 444
++ P
Sbjct: 559 KLLP 562
>gi|119512747|ref|ZP_01631818.1| AMP-dependent synthetase and ligase [Nodularia spumigena CCY9414]
gi|119462615|gb|EAW43581.1| AMP-dependent synthetase and ligase [Nodularia spumigena CCY9414]
Length = 237
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 94/219 (42%), Positives = 126/219 (57%), Gaps = 19/219 (8%)
Query: 240 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 299
VGYGLTE++ + RRP N+ GS G PI TEI IVD +T + LP G KG+V RG Q+
Sbjct: 3 VGYGLTETAAALTTRRPEHNLRGSAGIPIPGTEIWIVDPKTRKTLPQGEKGLVLARGPQI 62
Query: 300 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 359
MQGY+ NP AT +A++ GW NT D+G++ LVL GR KDTIVLS G
Sbjct: 63 MQGYYHNPEATNKAINPKGWFNTEDLGFLTAQQD----------LVLTGREKDTIVLSNG 112
Query: 360 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 419
ENVEP +E A LRS I QIVV+GQD+R GA+IVP+ + + A+ + L
Sbjct: 113 ENVEPEPIENACLRSDYIDQIVVVGQDRRSLGALIVPNWDNLEEWAENQGL----QLNLD 168
Query: 420 KEKTISLLYGELRKWTSK-----CSFQIGPIHVVDEPFT 453
+ +L EL + + +I P ++ EPF+
Sbjct: 169 SQPVQNLFRQELDREVRNRPGYSSNDRIVPFRLISEPFS 207
>gi|407278950|ref|ZP_11107420.1| long-chain fatty-acid--CoA ligase [Rhodococcus sp. P14]
Length = 596
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 179/387 (46%), Gaps = 52/387 (13%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE---NGDKFLSMLP 74
+ + I +DD+A+ VYTSGTTG PKG MLTH+N ++R + E G + L+ LP
Sbjct: 168 RLDGIRADDLASLVYTSGTTGRPKGCMLTHRNFYSEVRGILTASIGEVAKPGSRVLTFLP 227
Query: 75 PWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 133
HV RA +F G + ++ + +RY P+ ++ VP V+E + ++
Sbjct: 228 LAHVLARAVSLAVFEGGAAQAHWSDFGTISAQFERYAPNTILGVPRVFEKVRDAAARKAA 287
Query: 134 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
+ FA+ I L R PS+ L
Sbjct: 288 AGGRFNAAI--------FAFAEETAIAYSESLDRG--GPSF---------------ALKA 322
Query: 194 LHLLAEKLVYKKIQSAIGISK-AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
+A+KLVY K++ A+G +SGGG+L + F+ +GV + GYGLTES+ +
Sbjct: 323 KRNMADKLVYAKLRQAMGGECWFAISGGGALSPRLGHFFRGVGVPIYEGYGLTESTAAHS 382
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
P +G+VG P+ +I D G +++RG V QGY++N AT +
Sbjct: 383 VNVPGAQKIGTVGQPMGGNSTRIAD-----------DGEIELRGGVVFQGYWRNEKATAE 431
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
A DGW TGD+G I G + + GR KD I+ + G+NV P LE+
Sbjct: 432 AF-HDGWFRTGDLGEIDED----------GYVSITGRKKDLIITAGGKNVSPGPLEDRMR 480
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKE 399
+L+ Q VVIG + A++ D E
Sbjct: 481 SHTLVSQAVVIGDGRSYITALLTVDPE 507
>gi|336325229|ref|YP_004605195.1| acyl-CoA synthetase [Corynebacterium resistens DSM 45100]
gi|336101211|gb|AEI09031.1| acyl-CoA synthetase [Corynebacterium resistens DSM 45100]
Length = 610
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 189/381 (49%), Gaps = 50/381 (13%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGD---KFLSMLPPWHVYERA 82
D+ + VYTSGTTG PKG L H N L + R++ + G + L+ LP HV+ RA
Sbjct: 187 DVCSIVYTSGTTGRPKGCRLLHSNWLGEARAILTHPVGQCGHPGYRVLTFLPLAHVFARA 246
Query: 83 CGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
G ++ ++ + +L +R +P+ +++VP ++E +++G + + +
Sbjct: 247 ISLACVVGGATQIHWSDMGSLVTQFERSKPNLIVAVPRIFEKVHAGAKAKAVDGGGLK-- 304
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
A+ ++ + R + N + PS A L + +KL
Sbjct: 305 -AKIFLQAEKVAVEYSRALD------NPEGPS---------------AALKAQRAVFDKL 342
Query: 202 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
VY K++ A+G + +SGG + + F+ IGV++ GYGLTES+ IA N+
Sbjct: 343 VYSKVREAMGGKLEYAISGGSACNPELLHFFRGIGVRIFEGYGLTESTAAIAVNFDPDNI 402
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
+G+VG P+ I+I D G + ++G+ V GY++N ATK++ EDG+
Sbjct: 403 IGTVGRPMGGNTIRIDD-----------DGEITIKGTVVFDGYWRNEEATKESFTEDGFY 451
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
TGD+G + P G L + GR K+ IV + G+NV P +E+ + LI Q
Sbjct: 452 RTGDLGRLLPS----------GHLKITGRKKEIIVTAGGKNVSPGPMEDILRSAPLISQA 501
Query: 381 VVIGQDQRRPGAIIVPDKEEV 401
+V+G DQ+ GA+I D+E V
Sbjct: 502 MVVGDDQKFVGALISLDEEAV 522
>gi|343514857|ref|ZP_08751922.1| putative long-chain-fatty-acid-CoA ligase [Vibrio sp. N418]
gi|342799223|gb|EGU34798.1| putative long-chain-fatty-acid-CoA ligase [Vibrio sp. N418]
Length = 602
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 127/424 (29%), Positives = 200/424 (47%), Gaps = 55/424 (12%)
Query: 31 VYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSR 90
+YTSGTTG PKGVML + N+ Q++ + + D L LP HV+ERA +++ R
Sbjct: 184 IYTSGTTGQPKGVMLDYANIGAQLQGHDQRLSLTDQDVSLCFLPLSHVFERAWTFYVLYR 243
Query: 91 GIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRI 149
G Y ++D L +P M +VP YE ++S I +++ + R+V+
Sbjct: 244 GATNCYLQDTMQVRDALSEIRPTVMSAVPRFYEKIFSAIHEKVSKAPFIRKVL------- 296
Query: 150 SFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSA 209
F + C ++ ++PS + L + LA+KLV K+++
Sbjct: 297 -FTWAVNMGAKMAVC-HQDGRKPSLM---------------LKKSYKLADKLVLSKLRAL 339
Query: 210 IGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPI 268
+G + GG L I F+ AIG+ V++GYG+TE++ ++ C S+G +
Sbjct: 340 LGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDKCFDPASIGMSM 399
Query: 269 NHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWI 328
++KI E NE+L VRG VM+GY+K P T Q DE G+L TGD G I
Sbjct: 400 PGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETAQTFDEHGFLKTGDAGHI 448
Query: 329 APHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQR 388
+ G L + R K+ + S G+ + P +E A + I QI VI ++
Sbjct: 449 DEN----------GNLFITDRIKELMKTSNGKYIAPQVVEGAIGKDHFIEQIAVIADTRK 498
Query: 389 RPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWTSKCSF 440
A+IVP + + AK L+I + D EL K E ++ L EL K+ F
Sbjct: 499 FVSALIVPCFDSLEEYAKELNIKYHDRVELIKHHQIVEMLESRVNDLQKELAKFEQVKKF 558
Query: 441 QIGP 444
++ P
Sbjct: 559 KLLP 562
>gi|343503670|ref|ZP_08741479.1| putative long-chain-fatty-acid-CoA ligase [Vibrio ichthyoenteri
ATCC 700023]
gi|342814262|gb|EGU49209.1| putative long-chain-fatty-acid-CoA ligase [Vibrio ichthyoenteri
ATCC 700023]
Length = 602
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 127/424 (29%), Positives = 200/424 (47%), Gaps = 55/424 (12%)
Query: 31 VYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSR 90
+YTSGTTG PKGVML + N+ Q++ + + D L LP HV+ERA +++ R
Sbjct: 184 IYTSGTTGQPKGVMLDYANIGAQLQGHDQRLSLTDQDVSLCFLPLSHVFERAWTFYVLYR 243
Query: 91 GIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRI 149
G Y ++D L +P M +VP YE ++S I +++ + R+V+
Sbjct: 244 GATNCYLQDTMQVRDALSEIRPTVMSAVPRFYEKIFSAIHEKVSKAPFIRKVL------- 296
Query: 150 SFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSA 209
F + C ++ ++PS + L + LA+KLV K+++
Sbjct: 297 -FTWAVNMGAKMAVC-HQDGRKPSLM---------------LKKSYKLADKLVLSKLRAL 339
Query: 210 IGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPI 268
+G + GG L I F+ AIG+ V++GYG+TE++ ++ C S+G +
Sbjct: 340 LGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDKCFDPASIGMSM 399
Query: 269 NHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWI 328
++KI E NE+L VRG VM+GY+K P T Q DE G+L TGD G I
Sbjct: 400 PGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETAQTFDEHGFLKTGDAGHI 448
Query: 329 APHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQR 388
+ G L + R K+ + S G+ + P +E A + I QI VI ++
Sbjct: 449 DEN----------GNLFITDRIKELMKTSNGKYIAPQVVEGAIGKDHFIEQIAVIADTRK 498
Query: 389 RPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWTSKCSF 440
A+IVP + + AK L+I + D EL K E ++ L EL K+ F
Sbjct: 499 FVSALIVPCFDSLEEYAKELNIKYHDRVELIKHHQIVEMLESRVNDLQKELAKFEQVKKF 558
Query: 441 QIGP 444
++ P
Sbjct: 559 KLLP 562
>gi|359421871|ref|ZP_09213776.1| long-chain fatty-acid--CoA ligase FadD15 [Gordonia araii NBRC
100433]
gi|358242205|dbj|GAB11845.1| long-chain fatty-acid--CoA ligase FadD15 [Gordonia araii NBRC
100433]
Length = 602
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 190/401 (47%), Gaps = 60/401 (14%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD------IVPAENGDKFLS 71
+ + + +DD A +YTSGTTG PKG MLTH NLL ++ ++ + P G + L
Sbjct: 176 RRQALRADDPAVLIYTSGTTGRPKGCMLTHSNLLSEVEAVLSGGLKQFLRP---GRRLLM 232
Query: 72 MLPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQK 130
LP HV+ A G+ + + + NL + ++P ++SVP V+E +Y+ ++
Sbjct: 233 FLPMAHVFAHAITLIAIRGGVAVGFFNDIPNLVPEFAVFRPSLILSVPRVFEKVYNTARQ 292
Query: 131 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 190
+ A A I Y A K +Q S +AL R+
Sbjct: 293 NAHDDGKGKIFDAAASTAID--YNAAK------------EQGSVGLAL------RL---- 328
Query: 191 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 249
H + +KLVY K+++A+G + +SGG L + F+ +G+ V GYGLTE++
Sbjct: 329 ---RHTVFDKLVYSKLRAALGGDCELAISGGAPLGARLGHFFSGVGIPVYEGYGLTETTA 385
Query: 250 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 309
A P +G+VG P+ ++I D G + + G V GY+KNP A
Sbjct: 386 AFAVNTPGAVKVGTVGRPLAGNAVRIAD-----------DGEILLSGGVVFTGYWKNPEA 434
Query: 310 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 369
T +A+ DGW +TGDIG + G L + GR K+ +V + G+NV P LE+
Sbjct: 435 TDEAI-TDGWFHTGDIGKVDRD----------GFLSITGRKKEILVTAGGKNVSPAGLED 483
Query: 370 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 410
A L+ Q +V+G Q GA++ D + V R SI
Sbjct: 484 AIRSHPLVSQALVVGDKQPFIGALVTLDADAVDGWKSRNSI 524
>gi|421494648|ref|ZP_15941992.1| FADD [Morganella morganii subsp. morganii KT]
gi|400191071|gb|EJO24223.1| FADD [Morganella morganii subsp. morganii KT]
Length = 461
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 193/406 (47%), Gaps = 47/406 (11%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+ T +YTSGTTG PKGVML ++N+ Q+ + + D L LP HV+ERA
Sbjct: 42 DDLFTLIYTSGTTGEPKGVMLDYRNMAAQLYLHDERLTLTEDDVSLCFLPLTHVFERAWS 101
Query: 85 YFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
+++ G +Y + NL + + +P M +VP YE ++SGI +++ + +R +
Sbjct: 102 FYVMHTGALNVYLSDTNLVRKAMVSVKPTVMCAVPRFYEKVFSGIYEKVAQAPWYKRALF 161
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
+R K+ + R +KQ WL AR A+K V
Sbjct: 162 HWAVRTG------KKTLDA--QQRGEKQ--------SWLAARC--------DQFAQKKVL 197
Query: 204 KKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K++ +G + + + G L I F+ AIG+ ++ GYG+TE+ ++ + LG
Sbjct: 198 GKLRDVLGGNVRFLPAAGARLDDEIIRFFLAIGINIKYGYGMTETCATVSCWENSGYQLG 257
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G P+ E++I E NE ++VRG VM+GY+ P T+QA DGWL T
Sbjct: 258 SIGVPLPDVEVRI--GEENE---------IQVRGPVVMRGYYNKPEETRQAFTADGWLRT 306
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD G + G L + R KD + S G+ + P LE + I I V
Sbjct: 307 GDAGALDEQ----------GNLFITERLKDLMKTSNGKYIAPQMLEGTLGQDRFIEHIAV 356
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
+ ++ A+IVP + + A+ L++ + D EL K I L+
Sbjct: 357 VADARKFVSALIVPCFDTLEEHARALNLKYHDRMELLKNSQIVALF 402
>gi|384196585|ref|YP_005582329.1| AMP-binding protein [Bifidobacterium breve ACS-071-V-Sch8b]
gi|333109607|gb|AEF26623.1| AMP-binding enzyme [Bifidobacterium breve ACS-071-V-Sch8b]
Length = 607
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 134/467 (28%), Positives = 221/467 (47%), Gaps = 93/467 (19%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH----QIRSLYDIVPAENGDKFLSMLPPW 76
T+ ++D+AT VYTSG+TGNPKG LTHKN + ++L+++V ++ + L LP
Sbjct: 178 TVRTNDLATIVYTSGSTGNPKGAELTHKNFVSITIAASQALHEVV-LDDHPRLLLFLPLA 236
Query: 77 HVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLY--------S 126
H + R Y + G+ ++L DL+ ++P Y++ VP V+E +Y +
Sbjct: 237 HCFARFIQYASIASDDGVVGYLPDTKSLLPDLRSFEPTYLLGVPRVFEKVYNAASHKAGA 296
Query: 127 GIQKQIFTSSA-ARRVVAR---ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 182
G + ++F +A A RV +R A + +FA A + YE
Sbjct: 297 GWKGRLFLKAAEAARVWSRKEQAGEQHTFAEIAERAKYE--------------------- 335
Query: 183 WARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQV 240
LVY+ ++ A+G V+ GG+ P+ +DL FY IG+ +
Sbjct: 336 -----------------TLVYRTVRGALGPKIKYVACGGA-PLSLDLAHFYNGIGLPMIQ 377
Query: 241 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 300
GYG+TE++ AA R T NV+G+VG P + I+I D +G ++V+G V
Sbjct: 378 GYGMTETAAPFAATRVTDNVIGTVGQPAPGSSIRISD-----------EGELQVKGPNVF 426
Query: 301 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 360
+GY P T +A DGWL TGD+ I G +++ GR KD I+ + G+
Sbjct: 427 RGYHNLPEKTAEAFTADGWLRTGDLAEIDDE----------GRIIITGRIKDIIITAGGK 476
Query: 361 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE--VLMAAKRLSIVHADASEL 418
NV P+ LEE + ++ VV+G + GA++ D E + + A LS + +
Sbjct: 477 NVSPIPLEEEIAKCPIVEHCVVVGDQRPFIGALVTLDPESLAIWLPAHGLST----ETPV 532
Query: 419 SKEKTISLLYGELRKWTSKCSFQIG------PIHVVDEPFTVNFLCL 459
+ T + + E++++ K + + V+D FT CL
Sbjct: 533 DRLATNAAVREEIQQYVDKANATVSRAESVRKFAVLDTQFTQENKCL 579
>gi|410088659|ref|ZP_11285349.1| Long-chain-fatty-acid--CoA ligase [Morganella morganii SC01]
gi|455740222|ref|YP_007506488.1| Long-chain-fatty-acid--CoA ligase [Morganella morganii subsp.
morganii KT]
gi|409764905|gb|EKN49030.1| Long-chain-fatty-acid--CoA ligase [Morganella morganii SC01]
gi|455421785|gb|AGG32115.1| Long-chain-fatty-acid--CoA ligase [Morganella morganii subsp.
morganii KT]
Length = 602
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 193/406 (47%), Gaps = 47/406 (11%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+ T +YTSGTTG PKGVML ++N+ Q+ + + D L LP HV+ERA
Sbjct: 183 DDLFTLIYTSGTTGEPKGVMLDYRNMAAQLYLHDERLTLTEDDVSLCFLPLTHVFERAWS 242
Query: 85 YFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
+++ G +Y + NL + + +P M +VP YE ++SGI +++ + +R +
Sbjct: 243 FYVMHTGALNVYLSDTNLVRKAMVSVKPTVMCAVPRFYEKVFSGIYEKVAQAPWYKRALF 302
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
+R K+ + R +KQ WL AR A+K V
Sbjct: 303 HWAVRTG------KKTLDA--QQRGEKQS--------WLAARC--------DQFAQKKVL 338
Query: 204 KKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K++ +G + + + G L I F+ AIG+ ++ GYG+TE+ ++ + LG
Sbjct: 339 GKLRDVLGGNVRFLPAAGARLDDEIIRFFLAIGINIKYGYGMTETCATVSCWENSGYQLG 398
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G P+ E++I E NE ++VRG VM+GY+ P T+QA DGWL T
Sbjct: 399 SIGVPLPDVEVRI--GEENE---------IQVRGPVVMRGYYNKPEETRQAFTADGWLRT 447
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD G + G L + R KD + S G+ + P LE + I I V
Sbjct: 448 GDAGALDEQ----------GNLFITERLKDLMKTSNGKYIAPQMLEGTLGQDRFIEHIAV 497
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
+ ++ A+IVP + + A+ L++ + D EL K I L+
Sbjct: 498 VADARKFVSALIVPCFDTLEEHARALNLKYHDRMELLKNSQIVALF 543
>gi|409389512|ref|ZP_11241355.1| putative fatty-acid--CoA ligase [Gordonia rubripertincta NBRC
101908]
gi|403200439|dbj|GAB84589.1| putative fatty-acid--CoA ligase [Gordonia rubripertincta NBRC
101908]
Length = 612
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 124/423 (29%), Positives = 209/423 (49%), Gaps = 51/423 (12%)
Query: 9 TPVIAGKHY--KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENG 66
TP AG + ++ + +D+AT +YTSGTTG PKGV +TH+N++ ++ +L + +
Sbjct: 160 TPPPAGFDFAASWQAVEPEDLATLIYTSGTTGPPKGVEITHRNIVAEMAALAEKLEVGFD 219
Query: 67 DKFLSMLPPWHVYERACGYFI-FSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETL 124
D+ +S LP H+ +R + RGI++ R + L P + VP V++ +
Sbjct: 220 DRAISYLPAAHIADRVSSHAANMMRGIQITTVPDPREIAAALPDVHPTFFFGVPRVWQKI 279
Query: 125 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 184
+GI+ ++ S+ V +AL +F A + A ID
Sbjct: 280 RAGIEAKLAEESSP---VKKALAGWAFGVGA-----------------ADAQARIDGKGT 319
Query: 185 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS--LPMHIDLFYEAIGVKVQVGY 242
++ + H LA+KLV K+++A+G+ + +G G+ +P + F+ +G+ V +
Sbjct: 320 GLLGGVQ---HGLADKLVLHKVRAALGLDEVSFAGSGAAAIPPEVLKFFLGLGIPVLEVW 376
Query: 243 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 302
G++E++ V P +G+VG P+ E+K+ + G + VRG VM+G
Sbjct: 377 GMSETTGVSTMTTPDNLRVGTVGSPVRGMEVKLA-----------ADGELLVRGPVVMRG 425
Query: 303 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 362
Y K P T + +D +GWL+TGDI I G V +++ R K+ I+ +G+N+
Sbjct: 426 YRKQPEKTAETIDAEGWLSTGDIATI---------DDDGNVTIVD-RKKELIISESGKNM 475
Query: 363 EPLELEEA-ALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 421
P +E A SSLI Q+V IG + A++V D E V AK+L + D ELS
Sbjct: 476 SPTNIENAMKAASSLISQVVAIGDAKPYVSALVVLDPEAVATRAKKLDMPGVDLVELSAH 535
Query: 422 KTI 424
I
Sbjct: 536 PEI 538
>gi|238755757|ref|ZP_04617090.1| long-chain-fatty-acid--CoA ligase [Yersinia ruckeri ATCC 29473]
gi|238706049|gb|EEP98433.1| long-chain-fatty-acid--CoA ligase [Yersinia ruckeri ATCC 29473]
Length = 599
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 209/436 (47%), Gaps = 52/436 (11%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+D+ T +YTSGTTG PKGVML ++N+ Q+ + + D LS LP HV+ERA
Sbjct: 180 NDLFTLIYTSGTTGEPKGVMLDYRNMAAQLYLHDERLTLTTDDISLSFLPLSHVFERAWS 239
Query: 85 YFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
+++ G + +Y + + ++ +Q P M +VP YE ++S I +++ + RR +
Sbjct: 240 FYVMHTGAQNVYISNTDWVRQAMQAVSPTVMCAVPRFYEKVFSAIHEKVAQAKWYRRAL- 298
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
+A KR F + +QPS+ L+ LA++LV
Sbjct: 299 -----FHWAVGCGKR---KFRQQQQGRQPSWFSN---------------QLNRLADRLVL 335
Query: 204 KKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
+K++ +G + + G L ++ LF++AIG+ ++ GYG+TE+ ++ G
Sbjct: 336 QKLRGVLGGHVRFLPAAGARLDDNVILFFQAIGINIKYGYGMTETCATVSCWEEGRFRFG 395
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G P+ E+++ G++ +++RG VM+GY P T +DGWL T
Sbjct: 396 SIGKPLPGIEVRM-----------GAENEIQIRGPIVMRGYLNKPEETAATFTQDGWLKT 444
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD G I G L + R KD + S G+ + P +E + I QI V
Sbjct: 445 GDAGAIDQQ----------GNLFITERLKDLMKTSGGKYIAPQMIEGTLGQDRFIEQIAV 494
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY----GELRKWTSKC 438
I ++ A+IVP E + AK +++ + D EL + I ++ E++K SK
Sbjct: 495 IADTRKFVSALIVPCFESLEEYAKSINLKYHDRLELLRHSHIVEMFEQRLKEMQKELSKF 554
Query: 439 SFQIGPIHVVDEPFTV 454
Q+ ++ + F++
Sbjct: 555 E-QVKRFTLLPQAFSM 569
>gi|291456106|ref|ZP_06595496.1| putative CoA ligase [Bifidobacterium breve DSM 20213 = JCM 1192]
gi|291382515|gb|EFE90033.1| putative CoA ligase [Bifidobacterium breve DSM 20213 = JCM 1192]
Length = 615
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 134/467 (28%), Positives = 221/467 (47%), Gaps = 93/467 (19%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH----QIRSLYDIVPAENGDKFLSMLPPW 76
T+ ++D+AT VYTSG+TGNPKG LTHKN + ++L+++V ++ + L LP
Sbjct: 186 TVRTNDLATIVYTSGSTGNPKGAELTHKNFVSITIAASQALHEVV-LDDHPRLLLFLPLA 244
Query: 77 HVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLY--------S 126
H + R Y + G+ ++L DL+ ++P Y++ VP V+E +Y +
Sbjct: 245 HCFARFIQYASIASDDGVVGYLPDTKSLLPDLRSFEPTYLLGVPRVFEKVYNAASHKAGA 304
Query: 127 GIQKQIFTSSA-ARRVVAR---ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 182
G + ++F +A A RV +R A + +FA A + YE
Sbjct: 305 GWKGRLFLKAAEAARVWSRKEQAGEQHTFAEIAERAKYE--------------------- 343
Query: 183 WARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQV 240
LVY+ ++ A+G V+ GG+ P+ +DL FY IG+ +
Sbjct: 344 -----------------TLVYRTVRGALGPKIKYVACGGA-PLSLDLAHFYNGIGLPMIQ 385
Query: 241 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 300
GYG+TE++ AA R T NV+G+VG P + I+I D +G ++V+G V
Sbjct: 386 GYGMTETAAPFAATRVTDNVIGTVGQPAPGSSIRISD-----------EGELQVKGPNVF 434
Query: 301 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 360
+GY P T +A DGWL TGD+ I G +++ GR KD I+ + G+
Sbjct: 435 RGYHNLPEKTAEAFTADGWLRTGDLAEIDDE----------GRIIITGRIKDIIITAGGK 484
Query: 361 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE--VLMAAKRLSIVHADASEL 418
NV P+ LEE + ++ VV+G + GA++ D E + + A LS + +
Sbjct: 485 NVSPIPLEEEIAKCPIVEHCVVVGDQRPFIGALVTLDPESLAIWLPAHGLST----ETPV 540
Query: 419 SKEKTISLLYGELRKWTSKCSFQIG------PIHVVDEPFTVNFLCL 459
+ T + + E++++ K + + V+D FT CL
Sbjct: 541 DRLATNAAVREEIQQYVDKANATVSRAESVRKFAVLDTQFTQENKCL 587
>gi|326333548|ref|ZP_08199788.1| putative long-chain-fatty-acid--CoA ligase [Nocardioidaceae
bacterium Broad-1]
gi|325948657|gb|EGD40757.1| putative long-chain-fatty-acid--CoA ligase [Nocardioidaceae
bacterium Broad-1]
Length = 597
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 121/381 (31%), Positives = 184/381 (48%), Gaps = 55/381 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQ----IRSLYDIVPAENGDKFLSMLPPWHVYE 80
+D AT +YTSGTTG PKG +LTH N + + + SL + E G L LP HV+
Sbjct: 179 EDAATLIYTSGTTGRPKGCVLTHGNFMFELGVAVDSLDGLFNIE-GRSTLLFLPLAHVFA 237
Query: 81 RACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
R L +T ++NL DL +QP ++++VP V+E +Y+ +A++
Sbjct: 238 RIIQIGCIKSRTRLGHTPDIKNLVADLGTFQPTFVLAVPRVFEKVYN---------TASQ 288
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ VA RI T Y T K P L A H L
Sbjct: 289 KAVADGKGRIFDMATEVAIDYS--RATETGKAPLLLTAK----------------HKLFS 330
Query: 200 KLVYKKIQSAIGISKA-GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
KLVY K+ +A+G + + +SGG L + FY IGV V GYGLTE++ + P
Sbjct: 331 KLVYGKLLAALGGNCSYAISGGAPLGDRLGHFYRGIGVTVLEGYGLTETTAALTVNLPEA 390
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
+G+VG P+ T +++ D G + +G QV++ Y++NP+AT +A +DG
Sbjct: 391 FKIGTVGRPLPGTSVRVAD-----------DGELLFKGGQVLKEYWQNPTATAEAKTDDG 439
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
W ++GD+G + G + + GR K+ +V + G+NV P LE+ L+
Sbjct: 440 WFHSGDLGEVDDE----------GFVKITGRKKEILVTAGGKNVAPAVLEDRLRAHVLVD 489
Query: 379 QIVVIGQDQRRPGAIIVPDKE 399
Q +V+G Q GAI+ D E
Sbjct: 490 QCIVVGDGQPFIGAIVTIDPE 510
>gi|409198272|ref|ZP_11226935.1| long-chain-fatty-acid-CoA ligase [Marinilabilia salmonicolor JCM
21150]
Length = 636
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 200/410 (48%), Gaps = 54/410 (13%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+DIA YTSGTT PKG+ML+H+N + + + + L +LP H +
Sbjct: 175 NDIANISYTSGTTAQPKGIMLSHRNYTANVEQAFSFIDIPAHFRTLVVLPWDHAFAHTAA 234
Query: 85 YFIFS-RGIEL--------MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 135
+ F +G + ++N +++ QPH ++SVP + + I+K I
Sbjct: 235 LYAFMYKGASIASVETGRNQIETLKNFSNNIMEIQPHVLMSVPAMAKNFRKNIEKGI--- 291
Query: 136 SAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLH 195
A++ V L + Y+ + Y G + N K + + I PL+
Sbjct: 292 -ASKGKVVSGLFNFAMNYSIW---YNG---SGNDK-------------GKGLKKITAPLY 331
Query: 196 LLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGYGLTESSPVIAA 253
L ++++++ I+ G + GGG+L + IDL F+ A+G + GYGL+E++P+I+A
Sbjct: 332 KLFDRILFQTIRVRFGGNLQFFIGGGAL-LDIDLQRFFYALGTPMYQGYGLSEAAPIISA 390
Query: 254 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 313
P + LGS G + + E+KI D++ N LPAG+ G + V+G VM GY+KN AT +
Sbjct: 391 NTPDHHKLGSSGPIVQNLEVKICDSDGN-TLPAGTSGEIVVKGENVMLGYWKNQEATNET 449
Query: 314 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL- 372
+ DGWL TGD+G++ G L + GR K ++ S GE P +EEA +
Sbjct: 450 II-DGWLFTGDLGYLDNQ----------GYLYVLGRFKSLLIGSDGEKYSPEGIEEAIID 498
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 422
L+ Q V+ +IVP E+V +K L E+S+E+
Sbjct: 499 HCPLVDQFVLHNNQNPYTIGLIVPSSEKVNQLSKEL------GDEMSQEE 542
>gi|428207898|ref|YP_007092251.1| AMP-dependent synthetase and ligase [Chroococcidiopsis thermalis
PCC 7203]
gi|428009819|gb|AFY88382.1| AMP-dependent synthetase and ligase [Chroococcidiopsis thermalis
PCC 7203]
Length = 730
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 141/453 (31%), Positives = 204/453 (45%), Gaps = 65/453 (14%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDK--FLSMLPPWH 77
++ ++D+AT +Y G TG P+GVMLTH+NL +++ +P E G K LS LP H
Sbjct: 196 SLTANDLATIIYIPGATGKPQGVMLTHENLSANALAMFSGIPDLELGAKEVVLSFLPLTH 255
Query: 78 VYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQK---QIFT 134
V+ R Y + G + +T + L+ QP +VPL+ E +Y I + Q
Sbjct: 256 VFARVFFYGHMNYGHSVYFTTPNRVMKHLKEVQPTIFATVPLLLEKIYQRILETGSQTPQ 315
Query: 135 SSAARRVVARALIRI-SFAYTAFKRIYE----GFCLTRNQ-------KQPSYLVALIDWL 182
A+ V L R +FA F++ E F L+ + K P + +L W
Sbjct: 316 PETAKSVKYDLLPRFRTFAAQMFQKKQETPQQKFRLSSLRWLPPTQFKLPHWQASLTAWK 375
Query: 183 ------------WARIICAIL-----------WPLHLLAEKLVYKKIQSAIGIS-KAGVS 218
WA + W L L A +LV+ + +S G K +
Sbjct: 376 SLQTEQTQRLVDWAIALAQQYELGRSPSGKYDWMLKL-ANRLVFSRWRSVFGGHLKYAIC 434
Query: 219 GGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA 278
GG +L I + A V + GYGLTE+S +A R + N G+VG P+ EI I
Sbjct: 435 GGAALKAEIANLFAAARVTILQGYGLTETSSAVACNRGSFNRAGTVGVPLPGIEIAI--- 491
Query: 279 ETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSR 338
S G + VRG V QGY+KNP AT+QA+D +GW +TGDIG
Sbjct: 492 --------ASDGEILVRGPYVTQGYYKNPEATQQAIDSEGWFHTGDIGEFT--------- 534
Query: 339 RCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDK 398
G L + G K LSTG+ V P LE +S L+ + V +G +++ +I PD
Sbjct: 535 -ADGFLKIVGLKKSHFKLSTGKYVTPQPLEHKLEQSPLVAKAVAVGAERKFCAMLIFPDF 593
Query: 399 EEVLMAAKRLSIVHADASELSKEKTISLLYGEL 431
+ A+ L + DA EL I LY L
Sbjct: 594 NNLRQQAQLLELDLPDA-ELLNHPCILALYQAL 625
>gi|326771850|ref|ZP_08231135.1| long-chain-fatty-acid-CoA ligase [Actinomyces viscosus C505]
gi|326637983|gb|EGE38884.1| long-chain-fatty-acid-CoA ligase [Actinomyces viscosus C505]
Length = 630
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 124/406 (30%), Positives = 193/406 (47%), Gaps = 54/406 (13%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLL----HQIRSLYDIVPAENGDKFLSMLPPWHVYE 80
DD+ + +YTSGTTG PKGV LTH+N + H +R L ++ N + L LP HVY
Sbjct: 203 DDVYSIIYTSGTTGRPKGVELTHRNAVGIPYHGVRYLPGVLWGTN-VRLLLFLPLAHVYA 261
Query: 81 RACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
R + L +T + L DLQ + P Y+++VP V E +Y+ + S A+
Sbjct: 262 RCLQLLSLAGEGVLGHTPDAKTLLPDLQSFAPSYILAVPRVLEKIYNAADAK--AGSGAK 319
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ R +++ AY+ +G +R ++ H +A+
Sbjct: 320 LKLFRWAAKVAIAYSRALDTPQG--PSRGLRR----------------------AHAMAD 355
Query: 200 KLVYKKIQSAIGI-SKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
+LV++KI+ +G ++ +SGGG L + FY +G+ + GYGLTE+ ++
Sbjct: 356 RLVFRKIRGLMGPNARFIISGGGPLGQRLGHFYRGLGLAILEGYGLTETIGPVSVNTDWL 415
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
N +G+VG P+ EI+I + E ++VRG V Y NPSAT +A DG
Sbjct: 416 NKIGTVGPPVCGNEIRIGEDEE-----------IQVRGIGVFSTYHNNPSATAEAFTADG 464
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
W TGDIG + G L + GR K+ IV + G+NV P +LE+ LI
Sbjct: 465 WFRTGDIGALDED----------GYLRITGRKKELIVTAGGKNVAPAQLEDRLRGHPLIS 514
Query: 379 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 424
Q++VIG + A+I DKE + + + D E S +
Sbjct: 515 QVLVIGDGEPFISALITLDKEMLPQWLRNHGLAAMDVVEASSHPQV 560
>gi|91791441|ref|YP_561092.1| AMP-dependent synthetase and ligase [Shewanella denitrificans
OS217]
gi|91713443|gb|ABE53369.1| AMP-dependent synthetase and ligase [Shewanella denitrificans
OS217]
Length = 597
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 186/396 (46%), Gaps = 48/396 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+ T +YTSGTTG+PKGVML ++N+ IR + GD L+ LP HV+ER+
Sbjct: 179 DDLLTLIYTSGTTGDPKGVMLDYRNMASTIRQHDTCLNFNPGDTSLAFLPLSHVFERSWS 238
Query: 85 YFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
+F RG +Y +K+ + +PH + VP E +YS +Q ++ + +R+ +
Sbjct: 239 FFALCRGGRNVYLKDTMKIKEAIVAVRPHTLCVVPRFLEKVYSAVQDKVSKAPKSRQRL- 297
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
+A A +R +E + + + + S +++L W ++A KLV+
Sbjct: 298 -----FHWAMAAGQRQFE---VNQGRAKTSAILSL-QW--------------VVANKLVF 334
Query: 204 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K+Q+ +G K GG +L M + F+ I + V GYG+TE++ + V G
Sbjct: 335 SKLQAVLGGRLKFMPCGGAALDMTVGNFFHGINLPVLCGYGMTETNATVTMNTLNNRVPG 394
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S G P+ TE+K+ G+ + VRG VM+GY+K P T EDGWL T
Sbjct: 395 SNGKPLPETEVKL-----------GAFDEIMVRGDAVMRGYYKRPDDTAATF-EDGWLKT 442
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD G G L + R K+ + S G+ + P +E I Q+ +
Sbjct: 443 GDAGRFDEQ----------GNLFITDRIKELMKTSNGKYIAPQRVEGKVGSCPFIEQVAI 492
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 418
I + A+IVP E + AK +V + L
Sbjct: 493 IADGRNFVSALIVPSFEALEYWAKEQGLVFDSLASL 528
>gi|296269285|ref|YP_003651917.1| AMP-dependent synthetase and ligase [Thermobispora bispora DSM
43833]
gi|296092072|gb|ADG88024.1| AMP-dependent synthetase and ligase [Thermobispora bispora DSM
43833]
Length = 593
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 125/403 (31%), Positives = 195/403 (48%), Gaps = 69/403 (17%)
Query: 14 GKHYKYETI-------GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS--------LY 58
GK ET+ G D+AT +YTSGTTG PKG LTH NLL R+ L+
Sbjct: 160 GKEVSDETLAERRTSRGGPDLATIIYTSGTTGLPKGCRLTHDNLLFTARNVTQGPLSRLF 219
Query: 59 DIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISV 117
++ G L LP H R + + +T ++N+ DLQ +P ++++V
Sbjct: 220 EV----EGRSALLFLPLAHSLARLIQVALLETKTIIAHTPNIKNVAPDLQSSKPTFLLAV 275
Query: 118 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 177
P V+E +Y+ +++ + + + A + + AY+ + + G
Sbjct: 276 PRVFEKVYNAAEQK--ATEEGKGKIFHAAVATAIAYS--RELDSGGPR------------ 319
Query: 178 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGV 236
L RI AI +KLVY+K+++A G + VSGG +L + F+ IG+
Sbjct: 320 ----LGTRIKHAIF-------DKLVYRKLRAATGGALTAAVSGGSALGERLGHFFRGIGI 368
Query: 237 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRG 296
+V GYGLTE+S P N +G+VG P ++I D G + ++G
Sbjct: 369 EVLEGYGLTETSAPSTVNIPGANKIGTVGKPFPGVSVRIAD-----------DGEILIKG 417
Query: 297 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 356
V +GY+ N ATK+A+DE+GW +TGDIG + G L + GR K+ IV
Sbjct: 418 RHVFEGYWNNERATKEAIDEEGWFHTGDIGELDED----------GYLRITGRKKEIIVT 467
Query: 357 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
+ G+NV P LE+A L+ Q++V+G ++ GA+I D E
Sbjct: 468 AGGKNVAPAPLEDAIRAHRLVSQVMVVGDNRPFIGALITLDPE 510
>gi|238784583|ref|ZP_04628590.1| long-chain-fatty-acid--CoA ligase [Yersinia bercovieri ATCC 43970]
gi|238714549|gb|EEQ06554.1| long-chain-fatty-acid--CoA ligase [Yersinia bercovieri ATCC 43970]
Length = 589
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 201/415 (48%), Gaps = 47/415 (11%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ ++ DD+ T +YTSGTTG PKGVML ++N+ Q+ + D LS LP H
Sbjct: 163 RIDSCDLDDLFTLIYTSGTTGEPKGVMLDYRNMAAQLYLHDQRLTLTVDDVSLSFLPLSH 222
Query: 78 VYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ERA +++ G + +Y + + ++ +Q +P M +VP YE ++S I ++ +
Sbjct: 223 VFERAWSFYVMHTGAQNVYISDTDWVRPAMQAVKPTVMCAVPRFYEKVFSAINDKVALAK 282
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
RR++ R +A +R ++ Q +L+ L ++
Sbjct: 283 WHRRMLFR------WAVGCGERKFQNL-------QSGQTASLLSGL-----------MYK 318
Query: 197 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LA++LV K++ +G + + G L +I LF++AIG+ ++ GYG+TE+ ++
Sbjct: 319 LADRLVLSKLRGLLGGKVRFLPAAGARLDDNIILFFQAIGINIKYGYGMTETCATVSCWE 378
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
GS+G P+ ++++ G + ++VRG VM+GYF P T ++
Sbjct: 379 ERNFCFGSIGKPLPGIDVRL-----------GVENEIQVRGPIVMRGYFNKPQETAESFT 427
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
EDGWL TGD G + G L + R KD + S G+ + P +E +
Sbjct: 428 EDGWLKTGDAGALDAK----------GNLFITERLKDLMKTSGGKYIAPQMIEGTLGQDR 477
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 430
I QI +I ++ A+IVP E + A+ +++ + D EL + I L+ +
Sbjct: 478 FIEQIAIIADTRKFVSALIVPCFESLEEYARSINLKYHDRLELLRHSHIVSLFEQ 532
>gi|422023500|ref|ZP_16370005.1| long-chain-fatty-acid--CoA ligase [Providencia sneebia DSM 19967]
gi|414094268|gb|EKT55938.1| long-chain-fatty-acid--CoA ligase [Providencia sneebia DSM 19967]
Length = 605
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 196/414 (47%), Gaps = 47/414 (11%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+ T +YTSGTTG PKGVML + N+ Q+ + + D LS LP HV+ERA +
Sbjct: 187 DLFTIIYTSGTTGEPKGVMLDYSNMEAQLYLHDQRLKLTSDDVSLSFLPLSHVFERAWSF 246
Query: 86 FIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
++ G +Y T +++ + +P M +VP YE +YS IQ ++ + RR++
Sbjct: 247 YVMHVGARNVYLTETNAVREAMVDVKPTVMCAVPRFYEKVYSVIQSKVANAPLHRRLM-- 304
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
F + + LT+N K A+ L+ +A+KLV
Sbjct: 305 ------FNWAIAQGQKRTRALTKNSK----------------TNALNGLLYKIADKLVLA 342
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ +G + + G L +I F+ A G+ ++ GYG+TE+ ++ LGS
Sbjct: 343 KLRQVLGGRIRFMPAAGARLDDNIIAFFLAAGIDIKYGYGMTETCATVSCWEENHYPLGS 402
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
+G P++ E++I G ++V+G VM+GY+ P T+ A DGWL TG
Sbjct: 403 IGTPLSAVEVRI-----------GQDDEIQVKGPVVMKGYYNRPEETESAFTHDGWLKTG 451
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D G I H G L + R KD + S G+ + P +E + I I VI
Sbjct: 452 DAGKIDVH----------GNLYITDRLKDLMKTSNGKYIAPQMIEGILGQDRFIEHIAVI 501
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 437
++ A+IVP + + A+ +++++ D EL K+ +I L+ + K K
Sbjct: 502 ADARKFVSALIVPCYDSLEEYARSINLIYRDRLELLKDSSIVALFDKRLKELQK 555
>gi|226328341|ref|ZP_03803859.1| hypothetical protein PROPEN_02235 [Proteus penneri ATCC 35198]
gi|225203074|gb|EEG85428.1| AMP-binding enzyme [Proteus penneri ATCC 35198]
Length = 601
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 126/460 (27%), Positives = 214/460 (46%), Gaps = 58/460 (12%)
Query: 8 LTPVIAGKHYKYETI--------GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD 59
L +I H++++ + DD+ T +YTSGTTG PKGVML + +L Q+ +
Sbjct: 157 LEDLINQTHFQHDDVLKQRINECSLDDLFTLIYTSGTTGEPKGVMLDYTSLASQLYLHDE 216
Query: 60 IVPAENGDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVP 118
+ + D L LP HV+ERA +++ G + + T +++ + +P M +VP
Sbjct: 217 RLSLSDKDVSLCFLPLSHVFERAWSFYVMHTGAVNVYLTDTHAVREAMSEVKPTVMCAVP 276
Query: 119 LVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVAL 178
YE +YS IQ ++ +S R+++ + I+ KR NQ+Q ++ L
Sbjct: 277 RFYEKVYSAIQDKVSQASVFRQLIFKWAIK-----QGEKRREAQL----NQRQQGFISRL 327
Query: 179 IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVK 237
C + A+K V ++ +G + + G L + F+ A G+
Sbjct: 328 ---------C------YRFADKKVLNPLRQILGGRVRFLPAAGARLDDAVIRFFLATGIN 372
Query: 238 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 297
++ GYG+TE+ ++ LGS+G P+ E++I G++ ++VRGS
Sbjct: 373 IKYGYGMTETCATVSCWEENKYKLGSIGTPLPGIEVRI-----------GAENEIQVRGS 421
Query: 298 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 357
VM+GYF P T A EDGWL TGD G + G+L + R KD + S
Sbjct: 422 IVMKGYFNKPEDTAAAFTEDGWLRTGDAGALDS----------DGMLFITERLKDLMKTS 471
Query: 358 TGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 417
G+ + P +E + I I VI ++ A+IVP + + A+ L++ + D E
Sbjct: 472 NGKYIAPQMIEGTLGQDRFIEHIAVIADTRKFVSALIVPCFDALEEHARALNLKYHDRIE 531
Query: 418 LSKEKTISLLYGE-LRKWTSKCS--FQIGPIHVVDEPFTV 454
L + I L+ E LR+ S Q+ ++ E F++
Sbjct: 532 LLRHTKIKELFDERLREMQKNFSSFHQVKRFTLLAEGFSM 571
>gi|441509794|ref|ZP_20991707.1| long-chain fatty-acid--CoA ligase [Gordonia aichiensis NBRC 108223]
gi|441446069|dbj|GAC49668.1| long-chain fatty-acid--CoA ligase [Gordonia aichiensis NBRC 108223]
Length = 604
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 186/384 (48%), Gaps = 60/384 (15%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD------IVPAENGDKFLSMLPPWH 77
S+D +T +YTSGTTG PKG LTH N+L ++R + + P G + L LP H
Sbjct: 184 SNDPSTLIYTSGTTGRPKGCELTHANMLSEVRGVLQGNLSTLLGP---GKRLLMFLPLAH 240
Query: 78 VYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V A G+E+ +T +N+ +++P ++SVP V+E +++ ++
Sbjct: 241 VLAHAITLVAIEAGVEVGFTGDTKNIVTTFGQFKPSLILSVPRVFEKVFNSARQSAADGG 300
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
+ A + I ++ K+ EG + +L H
Sbjct: 301 KGKIFDAASATAIEYS----KKSEEGS-----------------------VPLLLKVKHA 333
Query: 197 LAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
+ ++LVY K+++A+G + +SGG L + F+ IG+ V GYGLTE++ +
Sbjct: 334 VFDRLVYSKLRAALGGRCELAISGGAPLGAMLGHFFNGIGIPVYEGYGLTETTAAFSVNT 393
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
P + +G+VG P+ ++I AE EV+ V G V GY+ NP AT+QAL
Sbjct: 394 PGESKIGTVGKPVAGNTVRI--AEDGEVM---------VTGGVVFHGYWNNPDATQQAL- 441
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
EDGW +TGD+G I G + + GR K+ IV + G+NV P LE+ ++
Sbjct: 442 EDGWFHTGDLGNI----------DSDGFISITGRKKELIVTAGGKNVSPSGLEDVLRSAA 491
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKE 399
L+ Q VV+G + A+I D E
Sbjct: 492 LVSQAVVVGDQKPFISALITIDPE 515
>gi|315633673|ref|ZP_07888963.1| long-chain-fatty-acid--CoA ligase [Aggregatibacter segnis ATCC
33393]
gi|315477715|gb|EFU68457.1| long-chain-fatty-acid--CoA ligase [Aggregatibacter segnis ATCC
33393]
Length = 595
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 195/430 (45%), Gaps = 55/430 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+D+ T +YTSGTTG PKGVML + NL HQ+ + + ++ D LS LP H++ERA
Sbjct: 177 EDLFTLIYTSGTTGEPKGVMLDYANLAHQLNAHDQALKVDDTDVSLSFLPLSHIFERAWV 236
Query: 85 YFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
++ RG Y N ++ L +P M +VP YE +Y+ I ++ + R+ +
Sbjct: 237 AYVLHRGATNCYIEDTNQVRSALTEIRPTLMCAVPRFYEKIYTAILDKVHHAPKLRQRIF 296
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
I + + L + QK I +L + LA KLV
Sbjct: 297 HWAIDVGHQHFD--------ALAKGQK----------------IRFLLKQQYALANKLVL 332
Query: 204 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K+++ +G + GG L I LF+ +IG+ +++GYG+TE++ ++
Sbjct: 333 GKLRALLGGRIRMMPCGGAKLESTIGLFFHSIGLNIKLGYGMTETTATVSCWDDLHFNAN 392
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G + E KI E NE+L VRG VM+GY+K P T DG+L T
Sbjct: 393 SIGRLMPGAEAKI--GENNEIL---------VRGGMVMKGYYKKPQETADTFTADGFLKT 441
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD G G L + R K+ + S G+ + P LE + I QI V
Sbjct: 442 GDAGEFDAE----------GNLYITDRIKELMKTSNGKYIAPQVLESKIGKDKFIEQIAV 491
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 434
I ++ A+IVP + AK+++I + D EL K E+ I+ L EL W
Sbjct: 492 IADAKKYVSALIVPSYAALEEYAKQVNIKYQDRLELLKNSEILQMLEQRINELQKELAGW 551
Query: 435 TSKCSFQIGP 444
F + P
Sbjct: 552 EQIKRFTLLP 561
>gi|333921588|ref|YP_004495169.1| acyl-CoA synthetase [Amycolicicoccus subflavus DQS3-9A1]
gi|333483809|gb|AEF42369.1| Acyl-CoA synthetase, long-chain fatty acid:CoA ligase
[Amycolicicoccus subflavus DQS3-9A1]
Length = 603
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 191/395 (48%), Gaps = 69/395 (17%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAENGDKFLSMLP 74
+ +++ ++ +AT +YTSGTTG PKG LTH N L ++ ++ D + L LP
Sbjct: 177 RRDSLNAESLATLIYTSGTTGRPKGCTLTHANFLSEVANVTMQLDDLFGRRDCATLLFLP 236
Query: 75 PWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLY-SGIQK-- 130
HV+ R + + L +TA VR+L DDL ++P ++++VP V+E +Y + +QK
Sbjct: 237 LAHVFARVIQLGCVYQRVTLGHTADVRDLLDDLAGFRPTFILAVPRVFEKVYNTAVQKAD 296
Query: 131 -----QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 185
+IF +AA I+ Y+ + L
Sbjct: 297 AAGKGKIFNRAAA----------IAIQYS-------------------------EALDTG 321
Query: 186 IICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 244
++ L L LVY+K++ ++G + +SGG +L + FY IG+ V GYGL
Sbjct: 322 VVPVGLRTRRALYNALVYRKLRKSLGGRATHAISGGSALGSRLGHFYRGIGLTVLEGYGL 381
Query: 245 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 304
TE++ I P +G+VG P+ ++I D G V V+G V GY+
Sbjct: 382 TETTAAITVNPPRYAKMGTVGLPVPGAVVRIAD-----------DGEVLVQGPMVFGGYW 430
Query: 305 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 364
+N AT +A+D DGW +TGDIG + G L + GR K+ IV + G+NV P
Sbjct: 431 RNEDATGEAIDNDGWFHTGDIGTLDEQ----------GYLAITGRKKEIIVTAGGKNVAP 480
Query: 365 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
+E+ L+ Q++V+G ++ GA++ D E
Sbjct: 481 AVIEDRIRAHPLVSQVMVVGDNEPFIGALVTLDAE 515
>gi|311742829|ref|ZP_07716637.1| long-chain-fatty-acid--CoA ligase [Aeromicrobium marinum DSM 15272]
gi|311313509|gb|EFQ83418.1| long-chain-fatty-acid--CoA ligase [Aeromicrobium marinum DSM 15272]
Length = 584
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 115/377 (30%), Positives = 176/377 (46%), Gaps = 52/377 (13%)
Query: 28 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP---AENGDKFLSMLPPWHVYERACG 84
AT VYTSGTTG PKG +LTH NL ++ +I+P ++ L LP HV+ R
Sbjct: 181 ATIVYTSGTTGRPKGCVLTHGNLRAELAGALEILPDLFGQDDATTLLFLPLAHVFARIIQ 240
Query: 85 YFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
G L +TA V +L L ++P ++++VP V+E +++ + +
Sbjct: 241 VGAIRSGATLGHTADVGDLVGHLGEFRPTFVLAVPRVFEKVFNSASAKAWADGRGPVFDR 300
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
A I+++ G L AR H + ++LVY
Sbjct: 301 AAATAIAYSRAQVDGGRPGVALR-----------------AR---------HRVFDRLVY 334
Query: 204 KKIQSAIGISKA-GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
+I+ A+G A +SGG L + FY IGV V GYGLTE++ + P +G
Sbjct: 335 GRIRDALGGRAAWAISGGAPLGERLAHFYRGIGVTVLEGYGLTETTAALCVNTPDDQRIG 394
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
+VG P TE ++ D G ++ RG QV GY+ +P AT Q LDE GW +T
Sbjct: 395 TVGRPFPRTEARVAD-----------DGELQFRGPQVFSGYWNDPEATAQVLDEHGWFST 443
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD+G I G + + GR K+ +V + G+NV P LE+ +++ Q VV
Sbjct: 444 GDLGEIDDD----------GFVRITGRKKEILVTAGGKNVAPAVLEDQVRAHAVVSQCVV 493
Query: 383 IGQDQRRPGAIIVPDKE 399
+G + A++ D+E
Sbjct: 494 VGDGKPFIAALVTVDRE 510
>gi|298346759|ref|YP_003719446.1| putative long-subunit-fatty-acid--CoA ligase [Mobiluncus curtisii
ATCC 43063]
gi|315656782|ref|ZP_07909669.1| long-chain-fatty-acid--CoA ligase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|298236820|gb|ADI67952.1| possible long-chain-fatty-acid--CoA ligase [Mobiluncus curtisii
ATCC 43063]
gi|315492737|gb|EFU82341.1| long-chain-fatty-acid--CoA ligase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 612
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 133/454 (29%), Positives = 208/454 (45%), Gaps = 69/454 (15%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDK---FLSMLP 74
+ + D + + VYTSGTTG PKGV LT +N ++ + D +P +K L LP
Sbjct: 183 RLSAVNLDSLLSIVYTSGTTGRPKGVELTQRNFVYMALMIGDSLPEVVDNKKTRLLLFLP 242
Query: 75 PWHVYERACGYFIFS-RGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS------- 126
HV+ R Y + S RG+ V+N+ +DLQ ++P MI VP V E +Y+
Sbjct: 243 LAHVFARFSSYTVLSGRGVLGCVPNVKNMLNDLQSFRPTSMIVVPRVLEKIYTAAQVKAG 302
Query: 127 -GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 185
G++ IF +AA+ I S A R + GF L R++
Sbjct: 303 RGLKHSIFNWAAAQ------AIHYSEALNDPNRKFVGFRLHRSRA--------------- 341
Query: 186 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 244
+A+KL++ K+ +G + +SGG L + F+ +G+ V G+GL
Sbjct: 342 -----------IADKLLFSKLLDLMGGECRWVISGGAPLGARLGHFFRGVGLTVIEGWGL 390
Query: 245 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 304
TE++ P +G+VG P+ E+KI + G + VR VM+GY
Sbjct: 391 TETAGPATGNLPGNIRIGTVGRPLPGVELKI-----------DASGEIFVRSRIVMRGYR 439
Query: 305 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 364
NP AT + LD DGW +GD+G I G L + GR K+ IV ++G+NV P
Sbjct: 440 NNPEATGEVLDSDGWFASGDLGEIDDD----------GYLSITGRKKELIVTASGKNVSP 489
Query: 365 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE--EVLMAAKRLSIVHADASELSKEK 422
LE++ L+ +VVIG + A++ D+E +A +L + + +
Sbjct: 490 APLEDSFRGHPLVSNVVVIGDKRPFVSALVTLDREMLPTWLANHKLPPMDPATAAIHPAV 549
Query: 423 TISLLYGELRKWTSKCSFQ-IGPIHVVDEPFTVN 455
SL+ G R S + I + V+ FTV+
Sbjct: 550 QESLMRGAQRASASVSRAESIRKVRVIIGDFTVD 583
>gi|330831126|ref|YP_004394078.1| Long-chain-fatty-acid--CoA ligase [Aeromonas veronii B565]
gi|328806262|gb|AEB51461.1| Long-chain-fatty-acid--CoA ligase [Aeromonas veronii B565]
Length = 596
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 201/430 (46%), Gaps = 55/430 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+ T +YTSGTTG PKGVML N+ + D L MLP HV+ERA
Sbjct: 176 DDLLTLIYTSGTTGEPKGVMLDFSNIAACFEMHNSRLDLNEQDVSLCMLPLSHVFERAWS 235
Query: 85 YFIFSRGIELMYTAV-RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
Y++ G E +Y + + D + QP M +VP +YE Y+ IQ ++ + A RR +
Sbjct: 236 YYVLYCGAENVYIRDPQKVMDVIGEVQPTVMCAVPRLYEKAYAMIQAKVAQAPALRRAL- 294
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
F + R+ + TR Q S L LW LAE+LV+
Sbjct: 295 -------FGWAT--RVGKQMVATR-QAGKSASPQLYGQLW-------------LAERLVF 331
Query: 204 KKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
+K+++ G ++ G L ++LF++A+G+ ++ GYG+TE++ + + LG
Sbjct: 332 RKLRARFGGRTRFLPVAGARLADDVNLFFQAMGLNLKYGYGMTETTATVCCYEDSQFKLG 391
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G +N E+K+ E NE+L VR VM+GY+ P AT + + EDG+L T
Sbjct: 392 SIGTALNGIEVKL--GENNELL---------VRSPTVMRGYYNKPDATAEVMTEDGFLRT 440
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD G + G + R K+ + S G+ V P +E + I QI +
Sbjct: 441 GDAGELDSQ----------GNIYFTERLKELMKTSNGKYVAPQLVEGTIGKDRFIEQIAI 490
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 434
+ + A+IVP E + A+ +++ + +EL + E I+ L EL K+
Sbjct: 491 VADARHFVSALIVPCFESLEEYARSINLQYQCKTELLRHSRVMEFFEARIADLQKELAKF 550
Query: 435 TSKCSFQIGP 444
F + P
Sbjct: 551 EQVKKFTLLP 560
>gi|346992642|ref|ZP_08860714.1| AMP-binding enzyme [Ruegeria sp. TW15]
Length = 628
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 198/408 (48%), Gaps = 49/408 (12%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG- 84
D A +YTSGTTGNPKG ML+H+N++ I + +P+++ D+ L LP H+ ER
Sbjct: 209 DTALLIYTSGTTGNPKGAMLSHENIMAAIEAGAHSLPSQSTDEQLCFLPLCHILERDVSI 268
Query: 85 -YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
Y + + + + +LQ P +VP V+E +YS + +F + A
Sbjct: 269 YYPLAMKSTVNFAESPETVFANLQEVSPATFTAVPRVWEKIYSQV---MFMAKEATPTGR 325
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
A ++ A TA + LT + PS VA+ W W R LV
Sbjct: 326 FAFVQALKAGTA----RADYILT-GKPVPSP-VAMRFWFWDR---------------LVL 364
Query: 204 KKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
+ ++ +G+ + G G+ P+ DL +Y AIGV + G+G+TE++ + A N +
Sbjct: 365 RNLRRMLGLDRLRRGGSGAAPISPDLLRWYWAIGVPIVEGFGMTETAGIAALNTLGVNKI 424
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
G++G P+ +++I D +G ++V+G + QGY++N + T ++ DGWL
Sbjct: 425 GTIGMPVPGNDMRISD-----------EGEIQVKGLNIFQGYWRNNAKTAESFTCDGWLR 473
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD+G I G + + GR KD I+ + G+N+ P E+E S I V
Sbjct: 474 TGDMGHIDED----------GFVTITGRLKDIIITAGGKNITPAEIESGLKFSQYISDAV 523
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYG 429
+IG ++ A+I+ D+E V A+ I ++ + L ++ L G
Sbjct: 524 IIGDRRKYLTALIMIDQENVEKFAQERKIPFSNFASLCAASEVTELIG 571
>gi|59712871|ref|YP_205647.1| long-chain-fatty-acid--CoA ligase [Vibrio fischeri ES114]
gi|59480972|gb|AAW86759.1| long-chain-fatty-acid--CoA ligase [Vibrio fischeri ES114]
Length = 612
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 128/428 (29%), Positives = 205/428 (47%), Gaps = 55/428 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+ERA
Sbjct: 186 DDLITLIYTSGTTGEPKGVMLDYENIASQLEGHNTRLALTEQDVSLCFLPLSHVFERAWT 245
Query: 85 YFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
+++ +G Y NL K+ L +P M +VP YE ++S + +++ + A R+V+
Sbjct: 246 FYVLYKGATNCYLPNTNLIKEALTEVKPTVMCAVPRFYEKIFSTVHEKVSRAPAHRKVMF 305
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
+ + +A ++ EG ++PS+ IL + +A+KLV
Sbjct: 306 TWAVNMGAKMSACQQ--EG-------REPSW---------------ILKQSYKVADKLVL 341
Query: 204 KKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K++ +G + + GG L + I F+ A+GV V++GYG+TE++ I+
Sbjct: 342 SKLRMILGGNINFMPCGGAKLDVTIGRFFHALGVNVKLGYGMTETTATISCWEDGKFHPD 401
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G + E+KI E +E+L VRG VM+GY+ P T+ EDG+L T
Sbjct: 402 SIGTLMPGAEVKI--GENSEIL---------VRGPMVMKGYYNKPEETESNFTEDGFLKT 450
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD G G L + R K+ + S G+ + P +E A + I QI V
Sbjct: 451 GDAGEF----------DADGNLYITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAV 500
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 434
I ++ A+IVP + + AK L+I + D EL K EK ++ L EL ++
Sbjct: 501 IADTRKFVSALIVPCYDALEEYAKELNIAYHDRMELIKHSEIVEMLEKRVANLQKELARF 560
Query: 435 TSKCSFQI 442
F +
Sbjct: 561 EQVKKFTL 568
>gi|119717337|ref|YP_924302.1| AMP-dependent synthetase and ligase [Nocardioides sp. JS614]
gi|119537998|gb|ABL82615.1| AMP-dependent synthetase and ligase [Nocardioides sp. JS614]
Length = 600
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 184/380 (48%), Gaps = 55/380 (14%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQ----IRSLYDIVPAENGDKFLSMLPPWHVYER 81
D+AT +YTSGTTG PKG MLTH N + + + L ++ ++ L LP HV+ R
Sbjct: 183 DLATLIYTSGTTGRPKGCMLTHGNFMFELSVAVAELPELFEGDDSSTLL-FLPLAHVFAR 241
Query: 82 ACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
L +++ ++NL DLQ ++P ++++VP V+E +++ Q T+ R
Sbjct: 242 IIQVGCIKTRTRLGHSSDIKNLLADLQEFKPTFILAVPRVFEKVFN-TASQKATADGRGR 300
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+ RA A TA + ++ +PS V H + +
Sbjct: 301 IFDRA------AETAI-----AYSRGLDRGRPSLAVR---------------AKHAVFRR 334
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
LVY K+ +A+G S + VSGG L + FY IG+ V GYGLTE++ + P
Sbjct: 335 LVYGKLLAALGGSCRYAVSGGAPLGDRLGHFYRGIGLTVLEGYGLTETTAALTVNLPDAI 394
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
+G+VG P+ T +++ D G + RG QV GY+ N +AT +AL+ D W
Sbjct: 395 KVGTVGRPLPGTAVRVAD-----------DGELLFRGGQVFAGYWHNETATSEALEPDAW 443
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
+TGD+G + G + + GR K+ +V + G+NV P LE+ LI Q
Sbjct: 444 FHTGDVGEVDDE----------GFVRITGRKKEILVTAGGKNVAPAVLEDRLRAHVLIDQ 493
Query: 380 IVVIGQDQRRPGAIIVPDKE 399
+V+G Q A++ D+E
Sbjct: 494 CMVVGDGQPFIAALVTIDRE 513
>gi|269122334|ref|YP_003310511.1| AMP-dependent synthetase and ligase [Sebaldella termitidis ATCC
33386]
gi|268616212|gb|ACZ10580.1| AMP-dependent synthetase and ligase [Sebaldella termitidis ATCC
33386]
Length = 819
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 184/380 (48%), Gaps = 74/380 (19%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 83
DD A +YTSGTTGNPKGVML+ +NLL + + + D+ L++LP HV
Sbjct: 140 KDDTAAMLYTSGTTGNPKGVMLSFENLLSNMEGIIAREIITDRDQTLALLPFHHVLPLMV 199
Query: 84 GYFIFSRGIELMYT---AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
+ G +++ A + + + L + + M+ VP VY+ L GI+ QI +S R+
Sbjct: 200 TLVVMHSGASIVFVSKIASKEMLEALGKNRVTIMVGVPRVYKLLADGIKAQIDSSFLPRQ 259
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
IY+ ++ K K
Sbjct: 260 ------------------IYKSTKFLKSMK---------------------------LRK 274
Query: 201 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
++ K+ +G + K +SGG L + + +E +G V GYGLTE+SP+IA T
Sbjct: 275 TIFAKVHKKLGSNLKQLISGGAKLDVEVGELFERLGFYVTEGYGLTETSPIIAVATITER 334
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
LG+VG + TE+KIV+ E + ++G QVM+GY+ P TK+ + EDGW
Sbjct: 335 KLGTVGKLLPRTEVKIVEDE------------IWIKGPQVMKGYYNKPDKTKEIITEDGW 382
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP--LELEEAALRSSLI 377
L TGD+G + G L ++GR IVLS G+N++P +E + A+ +LI
Sbjct: 383 LKTGDLGDLDSE----------GYLTVKGRKSSMIVLSNGKNIDPEAIETKIQAISKNLI 432
Query: 378 RQIVVIGQDQRRPGAIIVPD 397
+++ ++ ++++ AI+VPD
Sbjct: 433 KELGIVPKNEKL-NAIVVPD 451
>gi|359420882|ref|ZP_09212813.1| putative fatty-acid--CoA ligase [Gordonia araii NBRC 100433]
gi|358243155|dbj|GAB10882.1| putative fatty-acid--CoA ligase [Gordonia araii NBRC 100433]
Length = 609
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 206/436 (47%), Gaps = 52/436 (11%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
++ + D+AT +YTSGTTG PKGV +TH+N++ ++ SL +I+ + D+ LS LP H
Sbjct: 169 RWRAVQPGDLATLIYTSGTTGPPKGVEITHRNIIAELASLREIIDVDFEDRLLSYLPAAH 228
Query: 78 VYERACGYFI-FSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 135
+ +R + RG ++ R + L +P + VP V++ + +GI+ ++
Sbjct: 229 IADRVSTHATNMIRGPQITSEPDPRAIAAALPDARPTFFFGVPRVWQKMKAGIEAKLAEE 288
Query: 136 SAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLH 195
S+ I+ A AF E L K PS L+ + H
Sbjct: 289 SSG--------IKSKLAGWAFSVGAEVADLRLQGKSPSGLLGI---------------QH 325
Query: 196 LLAEKLVYKKIQSAIGIS--KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 253
LA+KLV K++ AIG+ + SG S+P + FY +G+ V +G++E++ V
Sbjct: 326 GLADKLVLSKVRGAIGMDTIRVAASGAASIPPEVLRFYLGMGIPVLEVWGMSETTGVSTM 385
Query: 254 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 313
+G+VG PI E+K+ G G + VRG +M GY P T +
Sbjct: 386 TSEDNLAIGTVGRPIGGVEVKL-----------GEDGELFVRGPVIMAGYRNQPDKTAET 434
Query: 314 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA-AL 372
+D DGWL TGD+ I G + + R K+ ++ +G+N+ P +E +
Sbjct: 435 IDADGWLATGDVAQIG----------ADGNVTIVDRKKELLINESGKNLAPTNIENSIKA 484
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELR 432
SSLI QIV +G + A+IV D + ++ A + I D + +S + E+R
Sbjct: 485 TSSLIGQIVALGDGKPYVTALIVLDPDVAVVKAHQHGIDENDLAAISSHPEV---VAEVR 541
Query: 433 KWTSKCSFQIGPIHVV 448
K ++ + ++ + V
Sbjct: 542 KAVTEGNAKLSRVEQV 557
>gi|403251222|ref|ZP_10917573.1| AMP-forming long-chain acyl-CoA synthetase [actinobacterium SCGC
AAA027-L06]
gi|402915430|gb|EJX36402.1| AMP-forming long-chain acyl-CoA synthetase [actinobacterium SCGC
AAA027-L06]
Length = 594
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/413 (30%), Positives = 201/413 (48%), Gaps = 55/413 (13%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ----IRSLYDIVPAENGDKFLSML 73
+ E + + +AT +YTSGTTG PKGV LTH N L + + D+ G L L
Sbjct: 169 RREKLKPETLATLIYTSGTTGKPKGVQLTHGNFLSECGNVVNGASDLFLKPGGSTLL-FL 227
Query: 74 PPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
P HV+ R + G+ L + + + L DL ++P ++++VP ++E +++G + +
Sbjct: 228 PVAHVFGRMVQIGSITAGLHLAHCSDLTKLPSDLASFKPTFVLAVPRIFEKIFNGAEAK- 286
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
+A + + ++ AY+ + + K+ S L+ L
Sbjct: 287 -AQAAGKGKIFHKAAEVAIAYSK----------SLDSKKISPLLKL-------------- 321
Query: 193 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
H L +KLVY KI++ +G +A +SGG L + FY G++V GYGLTE++
Sbjct: 322 -QHGLFDKLVYTKIRTGLGGRVEAAISGGAPLGERLGHFYRGAGIRVLEGYGLTETTAGA 380
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 311
+ + +GSVG PI T IKI AE EVL ++G VMQGY++N +A K
Sbjct: 381 TLNLTSAHRVGSVGKPIPGTTIKI--AEDGEVL---------IKGPIVMQGYWQNDAANK 429
Query: 312 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 371
+ DG+ +GD+G I G L + GR K+ IV + G+NV P LE+
Sbjct: 430 EVFTSDGYFKSGDLGKIDEE----------GYLSIVGRKKELIVTAGGKNVAPAVLEDRL 479
Query: 372 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 424
LI Q +V+G ++ A+I D + + A A ++L+K+ T+
Sbjct: 480 RSHPLISQCMVVGDNKPFIAALITIDPDAIKPWAVANKKEGASIADLAKDPTL 532
>gi|449432710|ref|XP_004134142.1| PREDICTED: long chain acyl-CoA synthetase 7, peroxisomal-like
[Cucumis sativus]
Length = 695
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 133/409 (32%), Positives = 194/409 (47%), Gaps = 58/409 (14%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 83
SDDIAT YTSGTTG PKG +LTH NL+ + + D ++S LP H+YERA
Sbjct: 255 SDDIATICYTSGTTGTPKGAVLTHGNLIASVAGCSLALKFFPSDVYISYLPLAHIYERAN 314
Query: 84 GYFIFSRGIELMYTAVRNLK--DDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
G+ + + N+K DD+ +P SVP +Y +Y+GI + TS +
Sbjct: 315 QVSTVYFGVAVGFYQGDNMKLMDDMIALRPTIFCSVPRLYNRIYAGIINAVKTSGVLKER 374
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
+ A AY + ++ N K PS LW +KL
Sbjct: 375 LFNA------AYNSKRQA------IMNGKSPS----------------PLW------DKL 400
Query: 202 VYKKIQSAIGISKAGVSGGGSLPMHIDL--FYE-AIGVKVQVGYGLTESSPVIAARRPTC 258
V+ KI++ +G + V G+ P+ D+ F + G V GYG+TE+S VI+A P
Sbjct: 401 VFNKIKAKLG-GRVRVLASGASPLSPDILEFLKICFGGVVFEGYGMTETSCVISAMDPDD 459
Query: 259 NVLGSVGHPINHTEIKIVDAE----TNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
+ G VG P EIK+VD T++ P S+G + VRG V +GYFK+ T++A+
Sbjct: 460 TLCGHVGAPNPACEIKLVDVPEMNYTSDDQPY-SRGEICVRGPLVFKGYFKDEVQTREAV 518
Query: 315 DEDGWLNTGDIG-WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 373
DEDGWL+TGDIG W+ GG L + R K+ L+ GE + P ++E +
Sbjct: 519 DEDGWLHTGDIGLWMQ-----------GGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAK 567
Query: 374 SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA-AKRLSIVHADASELSKE 421
+ Q V G +V E L A A I + D ++L +
Sbjct: 568 CKFVAQCFVYGDSFNASLVAVVSVDVETLKAWASSEGIKYNDLAQLCND 616
>gi|315655304|ref|ZP_07908204.1| long-chain-fatty-acid--CoA ligase [Mobiluncus curtisii ATCC 51333]
gi|315490244|gb|EFU79869.1| long-chain-fatty-acid--CoA ligase [Mobiluncus curtisii ATCC 51333]
Length = 612
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/395 (30%), Positives = 186/395 (47%), Gaps = 66/395 (16%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDK---FLSMLP 74
+ + D + + VYTSGTTG PKGV LT +N ++ + D +P +K L LP
Sbjct: 183 RLSAVNLDSLLSIVYTSGTTGRPKGVELTQRNFVYMALMIGDSLPEVVDNKKTRLLLFLP 242
Query: 75 PWHVYERACGYFIFS-RGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS------- 126
HV+ R Y + S RG+ V+N+ +DLQ ++P MI VP V E +Y+
Sbjct: 243 LAHVFARFSSYTVLSGRGVLGCVPNVKNMLNDLQSFRPTSMIVVPRVLEKIYTAAQVKSG 302
Query: 127 -GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 185
G++ IF +AA+ I S A R + GF L R++
Sbjct: 303 RGLKHSIFNWAAAQ------AIHYSEALNDPNRKFVGFRLHRSRA--------------- 341
Query: 186 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 244
+A+KL++ K+ +G + +SGG L + F+ +G+ V G+GL
Sbjct: 342 -----------IADKLLFSKLLDLMGGECRWVISGGAPLGARLGHFFRGVGLTVIEGWGL 390
Query: 245 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 304
TE++ P +G+VG P+ E+KI + G + VR VM+GY
Sbjct: 391 TETAGPATGNLPGNIRIGTVGRPLPGVELKI-----------DASGEIFVRSRIVMRGYR 439
Query: 305 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 364
NP AT + LD DGW +GD+G I G L + GR K+ IV ++G+NV P
Sbjct: 440 NNPEATGEVLDSDGWFASGDLGEIDDD----------GYLSITGRKKELIVTASGKNVSP 489
Query: 365 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
LE++ L+ +VVIG + A++ D+E
Sbjct: 490 APLEDSFRGHPLVSNVVVIGDKRPFVSALVTLDRE 524
>gi|326203752|ref|ZP_08193615.1| AMP-dependent synthetase and ligase [Clostridium papyrosolvens DSM
2782]
gi|325986192|gb|EGD47025.1| AMP-dependent synthetase and ligase [Clostridium papyrosolvens DSM
2782]
Length = 537
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 174/369 (47%), Gaps = 66/369 (17%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I D A V++SGTT N K ++LTH+NL I ++ D LS+LP H YE
Sbjct: 170 ISPDTAAEIVFSSGTTSNSKAIVLTHENLASNIAYCSQVIDVSVTDILLSILPNNHTYEL 229
Query: 82 ACGYF--IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
G I+ + +++ +K +L+ Y+P MI VP V E L +K+I + A +
Sbjct: 230 TAGILTPIYFGATICLNDSLKMMKRNLKTYKPTIMIVVPAVLEML----RKEILKAVANQ 285
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+N+K S A I IL +H+
Sbjct: 286 --------------------------NKNEKFSS----------AMKITKILKKVHINVS 309
Query: 200 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
+ ++ +I +G + + V GG LP+ I FY +G+K+ GYG+TE SP+++A
Sbjct: 310 RKLFGEILEVLGGNIRTFVCGGAFLPVEIIDFYTTMGIKLIQGYGITECSPLVSANTDRN 369
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
GSVG +KIVD E + V+G VM+GY+KNP T +A E+G
Sbjct: 370 GERGSVGKIGGGCSVKIVDNE------------IWVKGKNVMKGYYKNPEVT-EACMENG 416
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
W TGD+G+I + G L + GR K+ +VLS GENV P ELE L I
Sbjct: 417 WFKTGDLGYIGKN----------GYLYITGRKKNLLVLSNGENVSPEELEGKLLALDCIN 466
Query: 379 QIVVIGQDQ 387
+++V G+D
Sbjct: 467 EVIVFGEDD 475
>gi|288817523|ref|YP_003431870.1| long-chain-fatty-acid CoA ligase [Hydrogenobacter thermophilus
TK-6]
gi|384128289|ref|YP_005510902.1| AMP-dependent synthetase and ligase [Hydrogenobacter thermophilus
TK-6]
gi|288786922|dbj|BAI68669.1| long-chain-fatty-acid CoA ligase [Hydrogenobacter thermophilus
TK-6]
gi|308751126|gb|ADO44609.1| AMP-dependent synthetase and ligase [Hydrogenobacter thermophilus
TK-6]
Length = 829
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 134/423 (31%), Positives = 203/423 (47%), Gaps = 81/423 (19%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D A +YTSGTTG PKGVML+ KNLL I+++ + A D L++LP H Y
Sbjct: 147 DTALILYTSGTTGEPKGVMLSFKNLLSNIKAIEKLQIATERDITLALLPFHHSYPLMVTL 206
Query: 86 ----FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
+I + + L + L L+ Y+ ++ VP +Y+ + +Q++I T+
Sbjct: 207 LVPLYIGATVVFLEKLSSEELIKALKDYKVTILVGVPRLYQLMQKKVQERISTNP----- 261
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL-VALIDWLWARIICAILWPLHLLAEK 200
+A L ++S +YL AL WL+ W +H
Sbjct: 262 LASILFKLS----------------------AYLPKALRKWLF--------WKVH----- 286
Query: 201 LVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
QS G + VSGG LP+ F++ +G V GYGLTE+SP+++ P
Sbjct: 287 ------QSLGGHIRFLVSGGAKLPIDTACFFDRLGFTVIEGYGLTETSPIVSFNPPHRVK 340
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
LGSVG PI +KI G + VRG VMQGYFK P T++A +DGWL
Sbjct: 341 LGSVGVPIEEVYVKI-----------AQDGEIMVRGVNVMQGYFKKPQETEKAF-KDGWL 388
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL-RSSLIRQ 379
TGD+G++ G L + GR K+ IVL+ G+N+ P E+E L +S LI++
Sbjct: 389 LTGDLGYMDE----------DGYLYITGRKKEVIVLAGGKNINPEEIENLILSKSDLIKE 438
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCS 439
+ V+ D A+I+PD E+ AK++ I+ + E K + + EL +W
Sbjct: 439 VGVLEVDGFL-HALILPDMEK----AKKMGIL--NVREYIKWTVLDRVNRELPEWKRITG 491
Query: 440 FQI 442
F++
Sbjct: 492 FKL 494
>gi|260771944|ref|ZP_05880862.1| long-chain-fatty-acid--CoA ligase [Vibrio metschnikovii CIP 69.14]
gi|260613236|gb|EEX38437.1| long-chain-fatty-acid--CoA ligase [Vibrio metschnikovii CIP 69.14]
Length = 601
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 202/430 (46%), Gaps = 55/430 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+ T +YTSGTTG PKGVML ++N+ Q+ + + D L LP HV+ERA
Sbjct: 178 DDLYTLIYTSGTTGQPKGVMLDYRNIGAQLEGHDQRLTLSDQDISLCFLPLSHVFERAWS 237
Query: 85 YFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
++ +G +Y V +++ L +P M +VP YE ++S I +++ + R+ +
Sbjct: 238 CYVLYKGATNVYLQEVSQVREALSEVRPTVMCAVPRFYEKIFSAIHEKVAKAPFHRKAL- 296
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
F + C N +QPS WL R + LA+KLV
Sbjct: 297 -------FTWAVNMGAKMALCRQEN-RQPS-------WLLVRS--------YQLADKLVL 333
Query: 204 KKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 334 VKLRALLGGRIHFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWNDHQFNPD 393
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G + + ++KI E NE+L VRG VM+GY+K P T + DE G+L T
Sbjct: 394 SIGISMPNVQLKI--GENNEIL---------VRGPMVMRGYYKMPQETANSFDEQGFLKT 442
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD G I + G + + R K+ + S G+ + P +E + I QI V
Sbjct: 443 GDAGHIDEY----------GNVFITDRIKELMKTSNGKYIAPQLVEGTIGKDHFIEQIAV 492
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 434
I ++ A+IVP + + AK L+I + D EL K EK + L L K+
Sbjct: 493 IADTRKFVSALIVPCFDTLESYAKELNIKYHDRLELIKHSQVLEMFEKRVHDLQQGLAKF 552
Query: 435 TSKCSFQIGP 444
F++ P
Sbjct: 553 EQVKQFKLLP 562
>gi|254509714|ref|ZP_05121781.1| AMP-binding enzyme [Rhodobacteraceae bacterium KLH11]
gi|221533425|gb|EEE36413.1| AMP-binding enzyme [Rhodobacteraceae bacterium KLH11]
Length = 628
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 198/411 (48%), Gaps = 50/411 (12%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG- 84
D A VYTSGTTGNPKG ML+H+N++ I + +P+ D+ L LP H+ ER
Sbjct: 209 DTALLVYTSGTTGNPKGAMLSHENIMAAIEAGAHSLPSLATDEQLCFLPLCHILERDVSI 268
Query: 85 -YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
Y + ++ + + +LQ P +VP V+E +Y+ +Q + ++ R V
Sbjct: 269 YYPLATKSTVNFAESPETVFANLQEVSPATFTAVPRVWEKIYAHVQFMVKEATPTGRFVF 328
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
++ + I G K LVA+ LW R LV+
Sbjct: 329 SRALKAGMVRAEY--ILAG-------KPVPALVAMRFGLWDR---------------LVF 364
Query: 204 KKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
+ ++ +G+ + G G+ P+ DL +Y AIGV + G+G+TE++ + A N +
Sbjct: 365 RNLRRMLGMDRMRRGGSGAAPISPDLLRWYWAIGVPMVEGFGMTETAGIAALNTLEANKI 424
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
G++G P+ +I+I + G ++V+G V QGY++N + T + DGWL
Sbjct: 425 GTIGKPVPGNDIRISE-----------DGEIQVKGLNVFQGYWRNNAKTAETFTADGWLR 473
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGD+G + G + + GR KD I+ + G+N+ P E+E A S I V
Sbjct: 474 TGDMGHVDED----------GFVTITGRLKDIIITAGGKNITPAEIESALKFSQYISDAV 523
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD-ASELSKEKTISLLYGEL 431
+IG ++ A+I+ D+E V A+ I ++ AS + + I+L+ E+
Sbjct: 524 MIGDRRKYLTALIMIDQENVEKFAQERKIPFSNFASLCAAPEVIALIEREI 574
>gi|158520331|ref|YP_001528201.1| AMP-dependent synthetase and ligase [Desulfococcus oleovorans Hxd3]
gi|158509157|gb|ABW66124.1| AMP-dependent synthetase and ligase [Desulfococcus oleovorans Hxd3]
Length = 597
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 138/443 (31%), Positives = 207/443 (46%), Gaps = 51/443 (11%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 77
+ + G D A VYTSGTTG PKG +LTH NL +S + GD LP H
Sbjct: 171 RIDAAGPSDPAAIVYTSGTTGVPKGAVLTHDNLTFTAQSARECADIHEGDNTFLFLPLAH 230
Query: 78 VYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
V+ R C YF G + ++ L DDL+ +P + SVP +YE +Y+ ++ + +
Sbjct: 231 VFARLCVYFSVLTGTCTTFARSIDTLVDDLKASEPDWFASVPRIYEKVYA----KVISGA 286
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
A+ +A + R +A T I + R KQP I A +
Sbjct: 287 EAKGGLALKIFR--WACTVGNEISD----RRLNKQP--------------IPAGTAFKYK 326
Query: 197 LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
+A KLV+ K+Q+A+G + +SG L I F+ A V + G G++E++ R
Sbjct: 327 IATKLVFSKLQAALGGRVRWCISGAAPLNPDIAKFFHAADVLILEGLGMSENTSFTNVNR 386
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
G VG P E KI AE EVL RG VM+ Y+K P T + +
Sbjct: 387 VDNYRFGWVGQPGPGIEQKI--AEDGEVL---------FRGRNVMKEYYKMPEETAKTIA 435
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
DGW +TGD+G I G L + GR KD I+ + G+N+ P +E S
Sbjct: 436 PDGWQSTGDLGEIDDQ----------GFLQITGRKKDLIITAGGKNIAPSAIEGVIATSK 485
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL-SKEKTISLLYGEL-RK 433
I Q+ VIG ++ A++V D E V A+ +I D ++L K + + L+ E+ K
Sbjct: 486 YIAQVTVIGDRRKYLTALVVMDPETVAEYAQSNNIAFTDINDLGQKPEILKLIETEVAEK 545
Query: 434 WTSKCSFQ-IGPIHVVDEPFTVN 455
+ SF+ I + +V E FT++
Sbjct: 546 NKAFASFENIKKVTIVPE-FTID 567
>gi|359424890|ref|ZP_09215996.1| long-chain fatty-acid--CoA ligase [Gordonia amarae NBRC 15530]
gi|358239792|dbj|GAB05578.1| long-chain fatty-acid--CoA ligase [Gordonia amarae NBRC 15530]
Length = 601
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 182/387 (47%), Gaps = 54/387 (13%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAEN---GDKFLSMLP 74
+ T+ +D + +YTSGTTG PKG +LTH NLL + R+ E G + L LP
Sbjct: 174 RRATVRADSPSVLIYTSGTTGRPKGCVLTHSNLLSECRAALSTGIGEKLEPGKRLLMFLP 233
Query: 75 PWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 133
HV A G + +T+ ++NL + ++P ++SVP V+E +++ ++
Sbjct: 234 LAHVLAHAITLVAIDGGAAVGFTSDIKNLVPEFGNFRPSAILSVPRVFEKVFNTARQGAH 293
Query: 134 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
+ A I+F+ Q + LV L
Sbjct: 294 DGGKGKIFDLAADTAIAFS-------------DAQQNGGASLV--------------LKL 326
Query: 194 LHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
H + +KLVY K+++A+G + +SGG L + F+ +G+ V GYGLTE++ +
Sbjct: 327 KHTVFDKLVYSKLRTALGGQCEMAISGGAPLGARLGHFFSGVGIPVYEGYGLTETTAAFS 386
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
P +G+VG P+ +I D G + + G V GY+ NP+AT+
Sbjct: 387 VNTPGATKIGTVGRPLPGNSARIAD-----------DGEIMLHGGVVFDGYWNNPTATEA 435
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
A+ EDGW +TGDIG I G L + GR K+ IV + G+NV P LE+
Sbjct: 436 AV-EDGWFHTGDIGTIDDE----------GFLKITGRKKELIVTAGGKNVSPSGLEDVIR 484
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKE 399
S+L+ Q +V+G+ + GA++ D E
Sbjct: 485 ASALVSQALVVGEAKPFVGALVTIDAE 511
>gi|338534144|ref|YP_004667478.1| putative long-chain-fatty-acid--CoA ligase [Myxococcus fulvus HW-1]
gi|337260240|gb|AEI66400.1| putative long-chain-fatty-acid--CoA ligase [Myxococcus fulvus HW-1]
Length = 614
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/380 (31%), Positives = 184/380 (48%), Gaps = 56/380 (14%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
+ +D A +YTSGTTG+PKGV+LTH+N ++ ++ + GD + LP HV+ +
Sbjct: 186 VSMEDTAAIIYTSGTTGDPKGVILTHQNWAYEAKAAQSVGMMVPGDSVMLFLPLAHVFAQ 245
Query: 82 ACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
S G L+ +V L +L +P + SVP V+E +Y+ + T+ +A
Sbjct: 246 VVKAAWLSMGYRLVVAESVDKLLANLAETRPTALPSVPRVFEKVYN----NVVTNGSATP 301
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 200
+ L R +F ++++ + R Q + + LA+K
Sbjct: 302 GLKGRLFRWAF------KLFDEYVEARQQGREYSSLGFT-----------------LAKK 338
Query: 201 LVYKKIQSAI-----GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
LV+ K+ + I G + +SGG L I F++ +G+KV GYGLTE+S R
Sbjct: 339 LVFSKVHATISEKLGGNMRVFISGGAPLSPKIGYFFDLLGLKVLEGYGLTETSAGTTINR 398
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
+GSVG P+ TE+KI S G + +RG VM+GY+KNP AT A+D
Sbjct: 399 EHRIKIGSVGAPLPGTEVKI-----------ASDGEILIRGPGVMKGYYKNPEATADAID 447
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
+GW +TGDIG + + L + R KD IV + G+NV P LE A
Sbjct: 448 AEGWFHTGDIGALDADN----------YLRITDRKKDLIVTAGGKNVAPQNLENALKTFP 497
Query: 376 LIRQIVVIGQDQRRPGAIIV 395
+I Q +V G +RP +++
Sbjct: 498 IISQAMVYG--DKRPYLVVL 515
>gi|410867744|ref|YP_006982355.1| AMP-binding enzyme [Propionibacterium acidipropionici ATCC 4875]
gi|410824385|gb|AFV91000.1| AMP-binding enzyme [Propionibacterium acidipropionici ATCC 4875]
Length = 657
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/436 (28%), Positives = 208/436 (47%), Gaps = 53/436 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+A+ +YTSGTTG PKGVM+TH+ + Q +L + D L LP H E A
Sbjct: 217 DDVASLIYTSGTTGAPKGVMITHRAAMSQPAALDEFFTITASDHSLCFLPLSHALEWAWT 276
Query: 85 YFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
I S G Y T + + L +P ++VP +YE Q+ T + + +
Sbjct: 277 MVIISHGCLNTYVTNPKTVASMLAEVRPTLFVTVPKLYE--------QVMTVAREKVSDS 328
Query: 144 RALIRI-SFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 202
R IRI ++ +R ++ T ++P + + H +A++LV
Sbjct: 329 RLKIRIFDWSLDVGRRWWQ---TTEAGRRPDVGLRI---------------RHAVADRLV 370
Query: 203 YKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 261
+ ++ A+G K ++ GG+ L ++ F+ +IG+ + GYGLTESSP+++ P +
Sbjct: 371 LRAVRDAVGGPKTVLAAGGAPLRQEVEEFFASIGLLICQGYGLTESSPLVSFNSPGAHKF 430
Query: 262 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 321
G+ G P+ ++IK +G++G + RG +M+GY+ NP AT + +DGWL+
Sbjct: 431 GTAGKPLVGSQIK-----------SGAEGEILYRGPNIMKGYWNNPEATASTI-QDGWLH 478
Query: 322 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 381
TGDIG + G LV+ R KD IV G+N+ P +E L L Q V
Sbjct: 479 TGDIGHVDDD----------GYLVITDRLKDIIVTLNGKNISPQPIEGLLLADPLFEQAV 528
Query: 382 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKC--S 439
++G ++ ++ P V A+RL + A L + + + + T+K
Sbjct: 529 ILGDNRPCLTLLVKPSMPHVEEIAERLHLNLALPESLRSPELAEEIRKHVAELTAKLPNQ 588
Query: 440 FQIGPIHVVDEPFTVN 455
QI + V+ E FT +
Sbjct: 589 EQIRDLRVLWEDFTQD 604
>gi|373486529|ref|ZP_09577202.1| AMP-dependent synthetase and ligase [Holophaga foetida DSM 6591]
gi|372011390|gb|EHP11985.1| AMP-dependent synthetase and ligase [Holophaga foetida DSM 6591]
Length = 607
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/401 (30%), Positives = 195/401 (48%), Gaps = 47/401 (11%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA----ENGDKFLSMLPPWHVYE 80
+D+ T +YTSGTTG+PKG ML+H NL+ I ++ A E GD+ LS+LP HV+E
Sbjct: 176 EDLLTLIYTSGTTGDPKGAMLSHGNLMSNILDTVEVAVAALRPERGDRCLSVLPISHVFE 235
Query: 81 RACGYF-IFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
R G++ +F GI + Y ++ +L +L QP +++VP ++E +Y+ ++ +
Sbjct: 236 RTGGHYTMFYLGIAIYYAESLISLPANLLEVQPVVLMAVPRIFEKIYARVRDMATSGGLL 295
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
+R+ +A + R L R QP L+ L LA
Sbjct: 296 KRMA------FGWASSTCHRAVRHLYLNR---QPRGLLRL---------------QLELA 331
Query: 199 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
++++ KI+ G + V+GG +L I F+ A+GV + GYGLTE+SP++ R
Sbjct: 332 DRILLSKIREKTGGRLRFCVTGGSALNPRIMEFFWAMGVPIYEGYGLTETSPILTLNRLG 391
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
G VG+PI + + L G + G VMQGY+++ AT+ D D
Sbjct: 392 KVRPGYVGNPI------LRQYKDRPFLKLAPDGEILCAGPNVMQGYWRDEEATRDVFDSD 445
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
G+ TGD+G R G V + + R K+ IV + G+NV P +E A I
Sbjct: 446 GYFLTGDVGEFD---------RLGRVKITD-RKKEIIVTNAGKNVAPQPIENALRADDYI 495
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 418
Q V++G + AIIVP + +R + AD +E+
Sbjct: 496 EQAVLVGDHKNYLAAIIVPHLPALREWCQRKHLAFADDAEM 536
>gi|304389536|ref|ZP_07371499.1| possible long-chain-fatty-acid--CoA ligase [Mobiluncus curtisii
subsp. curtisii ATCC 35241]
gi|304327346|gb|EFL94581.1| possible long-chain-fatty-acid--CoA ligase [Mobiluncus curtisii
subsp. curtisii ATCC 35241]
Length = 612
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 133/454 (29%), Positives = 208/454 (45%), Gaps = 69/454 (15%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDK---FLSMLP 74
+ + D + + VYTSGTTG PKGV LT +N ++ + D +P +K L LP
Sbjct: 183 RLSAVNLDSLLSIVYTSGTTGRPKGVELTQRNFVYMALMIGDSLPEVVDNKKTRLLLFLP 242
Query: 75 PWHVYERACGYFIFS-RGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS------- 126
HV+ R Y + S RG+ V+N+ +DLQ ++P MI VP V E +Y+
Sbjct: 243 LAHVFARFSSYTVLSGRGVLGCVPNVKNMLNDLQSFRPTSMIVVPRVLEKIYTAAQVKAG 302
Query: 127 -GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 185
G++ IF +AA+ I S A R + GF L R++
Sbjct: 303 RGLKHSIFNWAAAQ------AIHYSEALNDPNRKFVGFRLHRSRA--------------- 341
Query: 186 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 244
+A+KL++ K+ +G + +SGG L + F+ +G+ V G+GL
Sbjct: 342 -----------IADKLLFSKLLDLMGGECRWVISGGAPLGARLGHFFRGVGLTVIEGWGL 390
Query: 245 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 304
TE++ P +G+VG P+ E+KI G + VR VM+GY
Sbjct: 391 TETAGPATGNLPGNIRIGTVGRPLPGVELKI-----------DVSGEIFVRSRIVMRGYR 439
Query: 305 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 364
NP AT + LD DGW +GD+G I G L + GR K+ IV ++G+NV P
Sbjct: 440 NNPEATGEVLDSDGWFASGDLGEIDDD----------GYLSITGRKKELIVTASGKNVSP 489
Query: 365 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV--LMAAKRLSIVHADASELSKEK 422
LE++ L+ +VVIG + A++ D+E + +A +L + + +
Sbjct: 490 APLEDSFRGHPLVSNVVVIGDKRPFVSALVTLDREMLPTWLANHKLPPMDPATAAIHPAV 549
Query: 423 TISLLYGELRKWTSKCSFQ-IGPIHVVDEPFTVN 455
SL+ G R S + I + V+ FTV+
Sbjct: 550 QESLMRGAQRASASVSRAESIRKVRVIIGDFTVD 583
>gi|406675652|ref|ZP_11082839.1| hypothetical protein HMPREF1170_01047 [Aeromonas veronii AMC35]
gi|404627042|gb|EKB23848.1| hypothetical protein HMPREF1170_01047 [Aeromonas veronii AMC35]
Length = 596
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 201/430 (46%), Gaps = 55/430 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+ T +YTSGTTG PKGVML N+ + D L MLP HV+ERA
Sbjct: 176 DDLLTLIYTSGTTGEPKGVMLDFSNIAACFEMHNSRLDLNQQDVSLCMLPLSHVFERAWS 235
Query: 85 YFIFSRGIELMYTAV-RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
Y++ G E +Y + + D + QP M +VP +YE Y+ IQ ++ + A RR +
Sbjct: 236 YYVLYCGAENVYIRDPQKVMDVIGEVQPTVMCAVPRLYEKAYAMIQAKVAQAPALRRAL- 294
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
F + ++ + TR Q S L LW LAE+LV+
Sbjct: 295 -------FGWAT--KVGKQMVATR-QAGKSASPQLYGQLW-------------LAERLVF 331
Query: 204 KKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
+K+++ G ++ G L ++LF++A+G+ ++ GYG+TE++ + + LG
Sbjct: 332 RKLRARFGGRTRFLPVAGARLADDVNLFFQAMGLNLKYGYGMTETTATVCCYEDSQFKLG 391
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G +N E+K+ E NE+L VR VM+GY+ P AT + + EDG+L T
Sbjct: 392 SIGTALNGIEVKL--GENNELL---------VRSPTVMRGYYNKPDATAEVMTEDGFLRT 440
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD G + G + R K+ + S G+ V P +E + I QI +
Sbjct: 441 GDAGELDSQ----------GNIYFTERLKELMKTSNGKYVAPQLVEGTIGKDRFIEQIAI 490
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 434
+ + A+IVP E + A+ +++ + +EL + E I+ L EL K+
Sbjct: 491 VADARHFVSALIVPCFESLEEYARSINLQYQCKTELLRHSRVMEFFEARIADLQKELAKF 550
Query: 435 TSKCSFQIGP 444
F + P
Sbjct: 551 EQVKKFTLLP 560
>gi|442320394|ref|YP_007360415.1| putative long-chain-fatty-acid--CoA ligase [Myxococcus stipitatus
DSM 14675]
gi|441488036|gb|AGC44731.1| putative long-chain-fatty-acid--CoA ligase [Myxococcus stipitatus
DSM 14675]
Length = 620
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/381 (31%), Positives = 183/381 (48%), Gaps = 56/381 (14%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 80
++ SDD VYTSGTTG PKG +LTH N +Q +++ I E D + LP HV+
Sbjct: 191 SVKSDDTYCIVYTSGTTGAPKGTLLTHGNWTYQAQAVRAIGMMEPSDSVMLFLPLAHVFA 250
Query: 81 RACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
+ S G L+ +V L ++ +P + SVP V+E +Y+ + + AA
Sbjct: 251 QVAKVAWLSMGCRLIIAESVDKLMANIAETRPTVLPSVPRVFEKVYNTV---VSNGMAAP 307
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ R L R +F +++ + + Q + + LA+
Sbjct: 308 GLKGR-LTRWAFG------LFDEYVEAKQQGREYNSLGFT-----------------LAK 343
Query: 200 KLVYKKIQSAIGISKAG-----VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 254
KLV+ K+++ + G VSGG L I F++ +G KV GYGLTE+S A
Sbjct: 344 KLVFTKVRATLDEKLGGNMRLFVSGGAPLSRKIAYFFDLLGFKVVEGYGLTETSAPCNAN 403
Query: 255 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 314
RP +GSVG P+ TE+KI + G V VRG V +GY+KNP+AT +AL
Sbjct: 404 RPNKIKIGSVGPPMPGTEVKI-----------AADGEVLVRGPCVTKGYYKNPTATAEAL 452
Query: 315 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 374
D DGW +TGDIG + + L + R KD IV + G+NV P +E
Sbjct: 453 DADGWYHTGDIGEVDSDN----------YLRITDRKKDIIVTAGGKNVAPQNIENTLKTF 502
Query: 375 SLIRQIVVIGQDQRRPGAIIV 395
++ Q +V G +RP +++
Sbjct: 503 PILSQAMVYG--DKRPYLVVL 521
>gi|423208221|ref|ZP_17194775.1| hypothetical protein HMPREF1169_00293 [Aeromonas veronii AER397]
gi|404619268|gb|EKB16184.1| hypothetical protein HMPREF1169_00293 [Aeromonas veronii AER397]
Length = 596
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 128/435 (29%), Positives = 204/435 (46%), Gaps = 65/435 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNL-----LHQIRSLYDIVPAENGDKFLSMLPPWHVY 79
DD+ T +YTSGTTG PKGVML N+ +H R + D L MLP HV+
Sbjct: 176 DDLLTLIYTSGTTGEPKGVMLDFSNIAACFEMHNCR-----LDLNQQDVSLCMLPLSHVF 230
Query: 80 ERACGYFIFSRGIELMYTAV-RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ERA Y++ G E +Y + + D + QP M +VP +YE Y+ IQ ++ + A
Sbjct: 231 ERAWSYYVLYCGAENVYIRDPQKVMDVIGEVQPTVMCAVPRLYEKAYAMIQAKVAQAPAL 290
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
RR + F + ++ + TR Q S L LW LA
Sbjct: 291 RRAL--------FGWAT--KVGKQMVATR-QAGKSASPLLYGQLW-------------LA 326
Query: 199 EKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
E+LV++K+++ G ++ G L ++LF++A+G+ ++ GYG+TE++ + +
Sbjct: 327 ERLVFRKLRARFGGRTRFLPVAGARLADDVNLFFQAMGLNLKYGYGMTETTATVCCYEDS 386
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
LGS+G +N E+K+ E NE+L VR VM+GY+ P AT + + ED
Sbjct: 387 QFKLGSIGTALNGIEVKL--GENNELL---------VRSPTVMRGYYNKPDATAEVMTED 435
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
G+L TGD G + G + R K+ + S G+ V P +E + I
Sbjct: 436 GFLRTGDAGELDSQ----------GNIYFTERLKELMKTSNGKYVAPQLVEGTIGKDRFI 485
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 429
QI ++ + A+IVP E + A+ +++ + +EL + E I+ L
Sbjct: 486 EQIAIVADARHFVSALIVPCFESLEEYARSINLQYQCKTELLRHSRVMEFFEARIADLQK 545
Query: 430 ELRKWTSKCSFQIGP 444
EL K+ F + P
Sbjct: 546 ELAKFEQVKKFTLLP 560
>gi|255533613|ref|YP_003093985.1| AMP-dependent synthetase and ligase [Pedobacter heparinus DSM 2366]
gi|255346597|gb|ACU05923.1| AMP-dependent synthetase and ligase [Pedobacter heparinus DSM 2366]
Length = 590
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 125/402 (31%), Positives = 192/402 (47%), Gaps = 56/402 (13%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 81
I +DI T +YTSGTTG PKGVMLTH NL+ + ++P + K LS LP H++ER
Sbjct: 169 ITPEDILTLIYTSGTTGTPKGVMLTHNNLVKNFENSAVLLP-DGIRKGLSFLPLSHIFER 227
Query: 82 ACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 140
Y + Y ++ + D+Q +P+ +VP + E +Y I ++ + +R
Sbjct: 228 MVVYLYMYCDTAVYYAESMDTIVADIQFVKPNVFSTVPRLLEKVYEKIMEKGKALTGIKR 287
Query: 141 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL-LAE 199
I F A +E I+ W + L L +A
Sbjct: 288 -------GIFFWSVALAEKFE-----------------IENSW-------FYNLKLGIAR 316
Query: 200 KLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
KLV+KK Q A+G + SGG +L + + A G+ V GYGLTE+SPVI
Sbjct: 317 KLVFKKWQEALGGEIVVIISGGAALNPRLARIFWAAGMPVFEGYGLTETSPVITVNHFGN 376
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
+ G+VG PIN E+KI AE EVL RG +M+GY+ T + +D+DG
Sbjct: 377 TMFGTVGPPINGVEVKI--AEDGEVL---------ARGHDIMKGYYLRDDLTAETIDKDG 425
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
W +TGDIG + G L + R K+ + G+ V P +E + L+
Sbjct: 426 WFHTGDIGELV----------NGRFLKITDRKKEIFKTAGGKYVAPQMIENKFKETVLVE 475
Query: 379 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 420
Q++V+G++++ P A+IVP+ + A + I + E++K
Sbjct: 476 QVMVLGENRKFPAALIVPNFVALKSWAAKKGINYTTDEEMAK 517
>gi|47220618|emb|CAG06540.1| unnamed protein product [Tetraodon nigroviridis]
Length = 681
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 136/459 (29%), Positives = 205/459 (44%), Gaps = 64/459 (13%)
Query: 13 AGKHYKYETI--GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-----IVPAEN 65
AGK++ + + +D++ +TSGTTGNPKG MLTH+N++ + IVP
Sbjct: 239 AGKNHLQKPVPPKPEDLSIICFTSGTTGNPKGAMLTHENVVADAAGVLKGFETAIVPTTE 298
Query: 66 GDKFLSMLPPWHVYERACGYFIFSRG--IELMYTAVRNLKDDLQRYQPHYMISVPLVYET 123
D +S LP H++ER I+ G + +R L DD++ QP VP +
Sbjct: 299 -DVSISFLPLAHMFERVVQTVIYGAGGRVGFFQGDIRLLPDDMKTLQPTVFPVVPRLLNR 357
Query: 124 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 183
+Y +Q S A T FK+ F + R + V + LW
Sbjct: 358 VYDKVQ--------------------SGAATPFKKWLLNFAVDRKYAEVKDGVIRSNSLW 397
Query: 184 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL-PMHIDLFYEAIGVKVQVG 241
+KL++ K+Q+++G + V+G + P + A+G ++ G
Sbjct: 398 ---------------DKLIFNKVQASLGGRVRVMVTGAAPISPTVLTFLRAALGCQIFEG 442
Query: 242 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 301
YG TE + P G VG P+ +K+VD E + +G V ++G V +
Sbjct: 443 YGQTECTAGCTFTMPGDATAGHVGAPLPCNMVKLVDVEEMNYFASNGEGEVCIKGRNVFK 502
Query: 302 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 361
GY K+P T +ALDEDGWL+TGDIG P GVL + R K+ L+ GE
Sbjct: 503 GYLKDPEKTAEALDEDGWLHTGDIGKWLPS----------GVLKIIDRKKNIFKLAQGEY 552
Query: 362 VEPLELEEAALRSSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 420
+ P ++E +RS + Q+ V G Q I+VPD E + AK L V EL +
Sbjct: 553 IAPEKIENVYVRSGPVAQVFVHGDSLQSCLIGIVVPDPEVLPGFAKNLG-VQGSLQELCR 611
Query: 421 EKTI-----SLLYGELRKWTSKCSFQIGPIHVVDEPFTV 454
K I S L R K Q+ I++ E FT+
Sbjct: 612 NKEIKKAVLSDLTNLGRAAGLKSFEQVKDIYLHHEQFTI 650
>gi|301059328|ref|ZP_07200255.1| AMP-binding enzyme [delta proteobacterium NaphS2]
gi|300446557|gb|EFK10395.1| AMP-binding enzyme [delta proteobacterium NaphS2]
Length = 603
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 198/408 (48%), Gaps = 52/408 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER--- 81
+D++ +YTSGTTG PKG MLTH+NL+ +++ P ++ D+ LS LP HV+E+
Sbjct: 180 EDVSMLIYTSGTTGPPKGAMLTHRNLMWMGQAITTENPMDDEDEVLSFLPLCHVFEQLFS 239
Query: 82 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
G+ + + + + D++ P +VP ++E S +
Sbjct: 240 VMGHITHGYTVNFIEN-LETVTDNMIEVSPTVGYAVPRIWEKYLSAV------------- 285
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
IR+S A T KR+ G L +K+ S ++ + + L + LA +
Sbjct: 286 ----YIRMSDA-TRLKRLVFGLALKTGKKRASLMMDF------KPVPGTLEFFYNLAHFV 334
Query: 202 VYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGYGLTESSPVIAARRPTCN 259
V++K++ +G + ++ G+ P+ D+ F+++IGV + GYG TE + V R
Sbjct: 335 VFRKLKERMGFDRMRIAYSGAAPISPDVLHFFQSIGVNLVEGYGQTEGTGVTCVSRVGKV 394
Query: 260 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 319
G+VG PI TEIKI D G + V+ V +GY++NP AT + + +DGW
Sbjct: 395 KFGTVGPPITGTEIKIAD-----------DGEILVKSPSVFKGYYQNPEATAETI-QDGW 442
Query: 320 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 379
L +GD+G I G L + R KD IV + G+N+ P +E S I
Sbjct: 443 LYSGDVGEI----------DVDGYLKITDRKKDIIVTAGGKNITPQYIENKLKFSPYIND 492
Query: 380 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLL 427
VVIG ++ A+I+ D++ V+ A+ + + +L+K I+ L
Sbjct: 493 AVVIGDQRKFITALIMIDEDNVVKFAQDNKVQFSTYKDLTKSPEINKL 540
>gi|334337306|ref|YP_004542458.1| long-chain-fatty-acid--CoA ligase [Isoptericola variabilis 225]
gi|334107674|gb|AEG44564.1| Long-chain-fatty-acid--CoA ligase [Isoptericola variabilis 225]
Length = 604
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/379 (31%), Positives = 185/379 (48%), Gaps = 52/379 (13%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDKFLSMLPPWHVYERA 82
DD+AT +YTSGTTG PKG LTH N + + VP G + L LP HV+ R
Sbjct: 179 DDLATIIYTSGTTGRPKGAELTHGNFASLAVNAVEAVPTVFTEGGRTLLFLPLAHVFARF 238
Query: 83 CGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
+ G L + ++ + L+ ++P Y+++VP V+E +Y+ SA ++
Sbjct: 239 VEVLAIAAGTVLGHWGDLKTVTAGLESFRPTYILAVPRVFEKVYN---------SAEQKA 289
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
A ++I F + A I L K PS LW + H +A+KL
Sbjct: 290 AAGGKLKI-FHWAAATAIEWSRALD-TPKGPS--------LWLNV-------QHKVADKL 332
Query: 202 VYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 260
VY K+++ +G ++ VSGGG L + F+ +G+ V GYGLTES+ + RP
Sbjct: 333 VYSKLRAVLGGQARHAVSGGGPLGERLGHFFRGLGLTVLEGYGLTESTAPTSVNRPDATK 392
Query: 261 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 320
+G+VG + +K+ A E+L +RG + +GY NP AT +A D + W
Sbjct: 393 IGTVGTQLPGCGVKL--APDGEIL---------LRGIHIFRGYHNNPEATAEAFDGE-WF 440
Query: 321 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 380
TGD+G + G L + GR K+ IV + G+NV P LE+ +L+ Q
Sbjct: 441 RTGDLGTLDDD----------GFLTITGRKKEIIVTAAGKNVAPAVLEDRIRAHALVSQC 490
Query: 381 VVIGQDQRRPGAIIVPDKE 399
VV+G ++ GA++ D E
Sbjct: 491 VVVGDNRPFIGALVTLDAE 509
>gi|296140376|ref|YP_003647619.1| AMP-dependent synthetase and ligase [Tsukamurella paurometabola DSM
20162]
gi|296028510|gb|ADG79280.1| AMP-dependent synthetase and ligase [Tsukamurella paurometabola DSM
20162]
Length = 601
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 123/388 (31%), Positives = 181/388 (46%), Gaps = 53/388 (13%)
Query: 16 HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE--NGDKFLSML 73
H + + D+AT +YTSGTTG PKG L H NL+ + ++ E G + L
Sbjct: 174 HAGRAGVKAADLATLIYTSGTTGRPKGCELMHSNLMSEAEAILASPFGEAIRGGSNVMFL 233
Query: 74 PPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 132
P HV RA F G + + +NL ++P ++SVP V+E +Y+ Q+
Sbjct: 234 PLAHVLARAVNIACFKGGAVVGHFNDTKNLVPQFAIFKPTLILSVPRVFEKVYASAQQSA 293
Query: 133 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 192
+ A A I ++ + ++ P +L
Sbjct: 294 VDGGKGKIFDAAAQTAIEYSES------------LDKGGPGL---------------VLK 326
Query: 193 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 251
H + +KLVY K+++A+G + K +SGG L + F+ +GV V GYGLTES+ I
Sbjct: 327 VKHAVFDKLVYGKLKAALGGNCKVAISGGAPLGARLGHFFRGVGVTVMEGYGLTESTAAI 386
Query: 252 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 311
+G+VG P+ KI AE E+L ++GS V +GY++N ATK
Sbjct: 387 TVNVEGAQKIGTVGRPLAGQGAKI--AEDGEIL---------LQGSVVFRGYWRNEEATK 435
Query: 312 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 371
AL EDGW +TGD+G I G L + GR K+ IV + G+NV P LE+A
Sbjct: 436 AAL-EDGWFHTGDLGSIDED----------GFLSITGRKKELIVTAGGKNVSPAGLEDAL 484
Query: 372 LRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
+ LI Q +VIG Q A+I D E
Sbjct: 485 RGNPLISQAMVIGDAQPFIAALITIDPE 512
>gi|403737820|ref|ZP_10950548.1| long-chain-fatty-acid--CoA ligase FadD [Austwickia chelonae NBRC
105200]
gi|403191932|dbj|GAB77318.1| long-chain-fatty-acid--CoA ligase FadD [Austwickia chelonae NBRC
105200]
Length = 602
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 190/398 (47%), Gaps = 50/398 (12%)
Query: 2 LFSLPILTPVIAGKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 61
L + P V + T+G D +AT VYTSGTTG PKGV L+H N+L ++ ++ +
Sbjct: 158 LLAQPTDPEVASTVEAHLRTMGHDTLATIVYTSGTTGEPKGVCLSHGNILAEVLAMKERF 217
Query: 62 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLV 120
G + + LP HV+ER+ + + G+E +Y T R + + + +P SVP +
Sbjct: 218 HLSPGLRSMCFLPLSHVFERSWTLVVLANGMENIYVTNPRTVAEAMVEIRPDAFCSVPRL 277
Query: 121 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 180
YE +Y+ +Q T +R V +R FA + +R + P++L+A
Sbjct: 278 YEKVYAVAHEQAGT--GVKRKVFDWAVRTGFATQSRRRA--------GKSVPAHLLA--- 324
Query: 181 WLWARIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVSGGGSLPMHIDLFYEAIGVKVQ 239
+ +A++LV +++ A+G K SGG + + F+ A ++V
Sbjct: 325 -------------ANAIADRLVLHRVRDAVGGPKRLMASGGAATRREVIEFFLAADLEVY 371
Query: 240 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 299
GYGLTE++P+++ +GSVG PI E++I D G + VRG V
Sbjct: 372 EGYGLTETAPMVSCNSVGQVRIGSVGRPIPRCEVRIAD-----------NGEILVRGPNV 420
Query: 300 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 359
GY+ P T++ DGW TGDIG + G L + R KD I+ + G
Sbjct: 421 FNGYWHAPELTEEVF-TDGWFRTGDIGHLDE----------DGYLYVTDRLKDLIITAQG 469
Query: 360 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 397
+N+ P LE LI VV+G +++ A++ P+
Sbjct: 470 KNIAPAPLENHLSADPLIESAVVVGDNRKYLVALLQPN 507
>gi|296394475|ref|YP_003659359.1| AMP-dependent synthetase and ligase [Segniliparus rotundus DSM
44985]
gi|296181622|gb|ADG98528.1| AMP-dependent synthetase and ligase [Segniliparus rotundus DSM
44985]
Length = 599
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/384 (31%), Positives = 179/384 (46%), Gaps = 55/384 (14%)
Query: 22 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD----IVPAENGDKFLSMLPPWH 77
+G+D +AT +YTSGTTG PKGV LTH+N L ++ + + + P + LP H
Sbjct: 177 LGADKLATLIYTSGTTGRPKGVCLTHRNFLSEVIATQEPIKAMAPKQGRANTAMFLPMAH 236
Query: 78 VYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 136
++ RA S + + + ++ L +DLQ+ QP + SVP VYE +Y
Sbjct: 237 IFARALTITSMSANVLIEFLSSTATLSEDLQKIQPTILFSVPRVYEKVYD---------- 286
Query: 137 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 196
S A EG ++ + VA + + +L H
Sbjct: 287 -------------SAKKKAAAGGKEGIF----ERASAVAVAYSEAVENGKPGVVLKLQHA 329
Query: 197 LAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 255
L ++L+Y K+++A+G G VSGG ++ + F+ IGV V GYGLTES+ I
Sbjct: 330 LFDRLLYSKLRAAVGGKVVGAVSGGAAISPRLAHFFNGIGVSVYQGYGLTESTAGITFNS 389
Query: 256 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 315
P N +GSVG + +I D G V + G V Y++NP AT A+
Sbjct: 390 PVANRVGSVGKLVAGCSARIAD-----------DGEVLLAGPVVFSEYWRNPEATAGAI- 437
Query: 316 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 375
EDGW + GD+G I G L + GR KD IV + G+NV P LEE +
Sbjct: 438 EDGWFHCGDLGRIDED----------GFLYITGRKKDIIVTAGGKNVAPQVLEEVLKEHN 487
Query: 376 LIRQIVVIGQDQRRPGAIIVPDKE 399
L+ Q VV+G + A++ D E
Sbjct: 488 LVSQGVVVGDGRPFIAALLTLDPE 511
>gi|225021764|ref|ZP_03710956.1| hypothetical protein CORMATOL_01792 [Corynebacterium matruchotii
ATCC 33806]
gi|224945460|gb|EEG26669.1| hypothetical protein CORMATOL_01792 [Corynebacterium matruchotii
ATCC 33806]
Length = 610
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/381 (31%), Positives = 184/381 (48%), Gaps = 51/381 (13%)
Query: 24 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI---VPAENGDKFLSMLPPWHVYE 80
S D+A+ VYTSGTTG PKG LTH N L ++ L A G + L+ LP HV
Sbjct: 187 SRDLASLVYTSGTTGRPKGCRLTHANWLSEVHGLLTNPIGAIARPGSRVLTFLPLAHVLS 246
Query: 81 RACGYFI-FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
RA + G + ++ L + QR +P+ ++ VP V+E +++ SA
Sbjct: 247 RAVSLAVAIGGGTQSHWSNFSTLGVEFQRARPNLILGVPRVFEKVHN---------SAVA 297
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
A +R + + A K E + PS ++ L H +
Sbjct: 298 NATAGGPVRAALFHKARKVAIEYSRALDTSEGPSRMLKL---------------QHKTYD 342
Query: 200 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
+LVY KI++A+G S +SGG ++ I F+ IG + GYGLTE++ A
Sbjct: 343 RLVYSKIRAAMGNSVHYAISGGSAMSPEILHFFRGIGAPIYEGYGLTETTAA-ATVDFVD 401
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
+G+VG PI ++I D +E+L ++G+ V GY+ NP+AT ++ +DG
Sbjct: 402 QKIGTVGPPIGGVSVRIND--DSEIL---------IKGTTVFDGYWNNPTATAESFTDDG 450
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
W NTGD+G I G LV+ GR KD IV + G+NV P +E+A + LI
Sbjct: 451 WFNTGDLGEILE----------SGHLVITGRKKDLIVTAGGKNVSPEPMEDALVAHPLIS 500
Query: 379 QIVVIGQDQRRPGAIIVPDKE 399
Q +V+G + G ++ D++
Sbjct: 501 QAMVVGDGKPFIGLLVTLDED 521
>gi|119776703|ref|YP_929443.1| AMP-binding family protein [Shewanella amazonensis SB2B]
gi|119769203|gb|ABM01774.1| AMP-binding family protein [Shewanella amazonensis SB2B]
Length = 597
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 123/401 (30%), Positives = 189/401 (47%), Gaps = 58/401 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
DD+ T +YTSGTTG PKGVML H+ + IR + GD L+ LP H++ERA
Sbjct: 179 DDLLTLIYTSGTTGEPKGVMLPHRAIASTIRQHDKRLAFTEGDVSLAFLPLSHIFERAWS 238
Query: 85 YFIFSR-GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
+++ R G + T +K+ + +PH + VP E +YS +Q ++ + A+R+ +
Sbjct: 239 FYVLGRGGCNVYLTDTNRVKEAIAAVRPHTLCVVPRFLEKVYSAVQDKLSRAPASRKAL- 297
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
++A + R +E + + + + L++ L AR LA+KLV
Sbjct: 298 -----FAWAMSVGGRRFE---VAQGRAKGGVLLS----LQAR-----------LADKLVG 334
Query: 204 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL- 261
+KI+ +G K GG +L + F+ A+ V V GYGLTE++ + TCN L
Sbjct: 335 RKIRDVLGGRLKFMPCGGAALNTDVGAFFNAVNVPVLCGYGLTETTATV-----TCNTLD 389
Query: 262 ----GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
GS G + EI+I E +E+L VRG VM GY+K P T A D +
Sbjct: 390 NRVPGSNGQCLPEVEIRI--GENDEIL---------VRGDTVMTGYYKRPEDTASAFD-N 437
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GW TGD G + G L + R K+ + S G+ + P +E R I
Sbjct: 438 GWFKTGDAGRLDE----------AGNLFITDRIKELMKTSNGKYIAPQRVEGVVGRCPFI 487
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 418
Q+ VI + A+IVP E + A+ + + EL
Sbjct: 488 EQVAVIADARNYVTALIVPAYEALEAWAREKGLKYESPLEL 528
>gi|422536534|ref|ZP_16612441.1| AMP-binding enzyme [Propionibacterium acnes HL078PA1]
gi|315081416|gb|EFT53392.1| AMP-binding enzyme [Propionibacterium acnes HL078PA1]
gi|456739309|gb|EMF63876.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes FZ1/2/0]
Length = 646
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 200/408 (49%), Gaps = 59/408 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAENGDKFLSMLPPWHVYER 81
DD+A +YTSGTTG PKGVM++H+ L ++++L +D+ PA D LS LP H E
Sbjct: 215 DDVAALIYTSGTTGEPKGVMISHRAALAELQALDAFFDVTPA---DHSLSFLPLSHALEW 271
Query: 82 ACGYFIFSRGIELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
+ G + T V N K L +P +SVP +YE + S + ++ + S A
Sbjct: 272 GWSMAVIRHGC--LNTFVPNPKTISAMLAEVRPTLFVSVPKLYEQVMS-VAREKVSDSPA 328
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
+ + IRI E + + ++PS L AR H +A
Sbjct: 329 KLKIFEWSIRIG---------REWWQAEQEGRRPSVS------LRAR---------HGVA 364
Query: 199 EKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
++LV K I+ AIG K ++ GG+ L ++ F+ A G+ V GYGLTE+SP+++ P
Sbjct: 365 DRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLLVCQGYGLTEASPLVSFNSPG 424
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
G+ G P+ +++ E E+L RG VM+GY+K P AT A+ ED
Sbjct: 425 GYKFGTAGRPLVGSQMTTT--EDGEIL---------YRGPNVMKGYWKAPEATAAAI-ED 472
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GWL+TGDIG I G LV+ R KD IV G+N+ P +E + ++ L
Sbjct: 473 GWLHTGDIGHIDED----------GFLVITDRLKDIIVTLNGKNISPQPIENSLMKDPLF 522
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS 425
V++G ++ ++ P +V A+RL I E+ + + ++
Sbjct: 523 EHAVLLGDNRPCLTLLVKPSLPQVEALAERLHITSMTGPEMLRSEELA 570
>gi|386823131|ref|ZP_10110286.1| long-chain-fatty-acid--CoA ligase [Serratia plymuthica PRI-2C]
gi|386379918|gb|EIJ20700.1| long-chain-fatty-acid--CoA ligase [Serratia plymuthica PRI-2C]
Length = 602
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 119/405 (29%), Positives = 191/405 (47%), Gaps = 47/405 (11%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+ T +YTSGTTG PKGVML ++NL Q+ + + D LS LP HV+ER +
Sbjct: 182 DLFTLIYTSGTTGEPKGVMLDYRNLAAQLYLHDERLTVNEEDVSLSFLPISHVFERIWSF 241
Query: 86 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
FI G + +Y + +++ + +P M +VP YE ++S + +++ + RR +
Sbjct: 242 FIMHSGAQNVYLPNTDWVREAMTAVRPTLMCAVPRFYEKIFSAVHEKVARAPWLRRAL-- 299
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
+A +R F R K L +L H A+KLV
Sbjct: 300 ----FHWAIVCGER---KFLQERAGKPLGKLFSLS---------------HRWADKLVLS 337
Query: 205 KIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K++ +G + + G L ++ LF++A+GV ++ GYG+TE+ ++ GS
Sbjct: 338 KLRGILGGRVRFLPAAGAKLDDNVILFFQAMGVNIKYGYGMTETCATVSCWEEGNFRFGS 397
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
+G P+ E++I AE NE ++VRG VM+GYF P T + DGWL TG
Sbjct: 398 IGKPLPGVEVRI--AEENE---------IQVRGPIVMRGYFNKPLETAASFTGDGWLKTG 446
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D G I G L + R KD + S G+ + P LE + I Q+ +I
Sbjct: 447 DAGAIDE----------AGNLFITERLKDLMKTSGGKYIAPQMLEGTLAQDRFIEQVAII 496
Query: 384 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 428
++ A+IVP E + AK +++ + D EL + I ++
Sbjct: 497 ADARKFVSALIVPSFESLEEYAKSINLKYQDRLELLRNSHIIEMF 541
>gi|261416778|ref|YP_003250461.1| AMP-dependent synthetase and ligase [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|385791611|ref|YP_005822734.1| AMP-binding family protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373234|gb|ACX75979.1| AMP-dependent synthetase and ligase [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|302327983|gb|ADL27184.1| AMP-binding family protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 601
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 118/377 (31%), Positives = 179/377 (47%), Gaps = 56/377 (14%)
Query: 21 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAEN-GDKFLSMLPPWHVY 79
TI DDI + +YTSG+TG PKGV LTH+N+L QI+++ + +N D L++LP HV
Sbjct: 187 TINPDDIFSIIYTSGSTGCPKGVELTHRNMLVQIQNIKPMFRFDNKKDTCLTILPVAHVL 246
Query: 80 ERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
ER YF G+ + + +NL L+ +P MI VP + E LY + T+S
Sbjct: 247 ERMAVYFYTFSGVTIYFGDNPKNLSHILREVRPTIMIVVPRILERLYESMT----TASDR 302
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
+ + R LI+ + K F PLH +
Sbjct: 303 AKGIKRFLIKQAIKIAKIKDPNRRF----------------------------EPLHWVF 334
Query: 199 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
+LVYK+++ A+G + + +SG +L I F IG+ V GYG+TE SPV++A
Sbjct: 335 NRLVYKQMREAVGGNFRMIISGSSALNKSILRFLLNIGLPVFEGYGMTECSPVVSANCKQ 394
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
GS+G P+ H +++I E NE +++RG V +GY P + D
Sbjct: 395 AIRPGSIGKPLAHLDVRI--GECNE---------IQIRGESVFKGYHNRPDLNAKNFTPD 443
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
G+ ++GD G+ G L GR K+ + STG+ V P +E R L+
Sbjct: 444 GFYHSGDQGYFDK----------DGFLYFTGRIKELLKTSTGKYVSPNPIELEITRHPLV 493
Query: 378 RQIVVIGQDQRRPGAII 394
Q +VI D++ AII
Sbjct: 494 EQALVIANDRKFASAII 510
>gi|239917880|ref|YP_002957438.1| AMP-forming long-chain acyl-CoA synthetase [Micrococcus luteus NCTC
2665]
gi|281413623|ref|ZP_06245365.1| AMP-forming long-chain acyl-CoA synthetase [Micrococcus luteus NCTC
2665]
gi|239839087|gb|ACS30884.1| AMP-forming long-chain acyl-CoA synthetase [Micrococcus luteus NCTC
2665]
Length = 611
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 189/402 (47%), Gaps = 84/402 (20%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR-----SLYDIVPAENGDKFLSM 72
+ + G D+AT +YTSGTTG PKG LTH+N + SL D+V +
Sbjct: 180 RRSSAGLADLATIIYTSGTTGRPKGCELTHENFAELVNQTLSSSLGDVVRQDTSTVLF-- 237
Query: 73 LPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLY------ 125
+P HV+ R + G + + ++ L LQ +QP ++++VP V+E +Y
Sbjct: 238 IPLAHVFARFVSVLTVAAGARCGHVSDIKRLSVSLQTFQPSFVLAVPRVFEKIYNAALLN 297
Query: 126 --SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 183
SG +++IF R A IR W
Sbjct: 298 AQSGGKEKIF------RRGADVAIR----------------------------------W 317
Query: 184 ARIICA--ILWPLHL---LAEKLVYKKIQSAIGISKA-GVSGGGSLPMHIDLFYEAIGVK 237
+R + + + PL L L+Y++I++A+G A VSGGG L + F+ +GV
Sbjct: 318 SRALDSGQMTAPLRLQRAFYSALIYRRIRTAMGGRLAYAVSGGGPLSTDLAHFFRGVGVT 377
Query: 238 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 297
+ GYGLTE++ I RP +G+VGHP+ +++I AE E+L RG+
Sbjct: 378 ILEGYGLTETTAPITVGRPDRLKIGTVGHPLGGNQVRI--AEDGEIL---------TRGT 426
Query: 298 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 357
+M+GY P A ++A EDGW TGD+G + G L + GR K+ +V +
Sbjct: 427 SLMRGYHNRPEANEEAF-EDGWFRTGDLGALDDD----------GFLTITGRKKELLVTA 475
Query: 358 TGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 399
G+NV P LE+A +LI Q++V+G + AI+ D +
Sbjct: 476 GGKNVAPAMLEDAIRSDALISQVMVVGDGKPFIAAIVTLDTD 517
>gi|229820393|ref|YP_002881919.1| AMP-dependent synthetase and ligase [Beutenbergia cavernae DSM
12333]
gi|229566306|gb|ACQ80157.1| AMP-dependent synthetase and ligase [Beutenbergia cavernae DSM
12333]
Length = 606
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 188/387 (48%), Gaps = 54/387 (13%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP---AENGDKFLSMLP 74
+++ +G +D+AT +YTSGTTG P+G LTH N + ++ ++P A G + L +P
Sbjct: 171 RHDAVGMEDLATIIYTSGTTGRPRGAELTHGNFVALTKNAIAVIPDVFAAPGARTLLFMP 230
Query: 75 PWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 133
HV+ R + + G+ L +T L DL ++P +++SVP V+E +Y+ + +
Sbjct: 231 LAHVFARFVEVLVVAAGVPLGHTPDTTTLVADLGTFRPTFILSVPRVFEKVYNSAEAKAA 290
Query: 134 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
FA+ A R + + + PSY + L
Sbjct: 291 AGGKE----------KIFAWAA--RTAIAYSRSLDTGGPSYGLRL--------------- 323
Query: 194 LHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 252
H +A KLV K+Q A+G + VSGGG L + F+ IG+ V GYGLTE++ +
Sbjct: 324 KHRIAHKLVLHKLQDAMGGKLEHAVSGGGPLGERLGHFFRGIGLVVLEGYGLTETTAPLN 383
Query: 253 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 312
RP +G+VG P+ I+I A E+L +G V +GY N +AT +
Sbjct: 384 VNRPERVKIGTVGPPLPGIGIRI--APDGEIL---------AQGIAVFRGYHDNDAATAE 432
Query: 313 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 372
A+ +DGW +TGDIG + G L + GR K+ IV + G+NV P LE+A
Sbjct: 433 AM-KDGWFHTGDIGEL----------DSDGYLRITGRKKEIIVTAGGKNVAPAPLEDAIR 481
Query: 373 RSSLIRQIVVIGQDQRRPGAIIVPDKE 399
L+ Q +V+G + A+I D E
Sbjct: 482 AHPLVSQCLVVGDGRPFVAALITLDPE 508
>gi|423687002|ref|ZP_17661810.1| long-chain-fatty-acid--CoA ligase family protein [Vibrio fischeri
SR5]
gi|371493761|gb|EHN69361.1| long-chain-fatty-acid--CoA ligase family protein [Vibrio fischeri
SR5]
Length = 612
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 127/428 (29%), Positives = 204/428 (47%), Gaps = 55/428 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+D+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+ERA
Sbjct: 186 NDLLTLIYTSGTTGEPKGVMLDYENIASQLEGHNTRLALTEQDVSLCFLPLSHVFERAWT 245
Query: 85 YFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
+++ +G Y NL K+ L +P M +VP YE ++S + +++ + A R+V+
Sbjct: 246 FYVLYKGATNCYLPNTNLIKEALTEVKPTVMCAVPRFYEKIFSTVHEKVSRAPAHRKVMF 305
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
+ + + ++ EG K+PS+ IL + +A+KLV
Sbjct: 306 TWAVNMGAKMSVCQQ--EG-------KEPSW---------------ILKQSYKVADKLVL 341
Query: 204 KKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K++ +G + + GG L + I F+ A+GV V++GYG+TE++ I+
Sbjct: 342 SKLRMILGGNINFMPCGGAKLDVTIGRFFHALGVNVKLGYGMTETTATISCWEDGKFHPD 401
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G + E+KI E +E+L VRG VM+GY+ P T+ EDG+L T
Sbjct: 402 SIGTLMPGAEVKI--GENSEIL---------VRGPMVMKGYYNKPEETESNFTEDGFLKT 450
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD G G L + R K+ + S G+ + P +E A + I QI V
Sbjct: 451 GDAGEF----------DADGNLYITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAV 500
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 434
I ++ A+IVP + + AK L+I + D EL K EK ++ L EL ++
Sbjct: 501 IADTRKFVSALIVPCYDALEEYAKELNIAYHDRMELVKHSEIVEMLEKRVANLQKELARF 560
Query: 435 TSKCSFQI 442
F +
Sbjct: 561 EQVKKFTL 568
>gi|197334906|ref|YP_002157059.1| long-chain-fatty-acid--CoA ligase family protein [Vibrio fischeri
MJ11]
gi|197316396|gb|ACH65843.1| putative long-chain-fatty-acid--CoA ligase family protein [Vibrio
fischeri MJ11]
Length = 612
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 127/428 (29%), Positives = 204/428 (47%), Gaps = 55/428 (12%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 84
+D+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+ERA
Sbjct: 186 NDLLTLIYTSGTTGEPKGVMLDYENIASQLEGHNTRLALTEQDVSLCFLPLSHVFERAWT 245
Query: 85 YFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 143
+++ +G Y NL K+ L +P M +VP YE ++S + +++ + A R+V+
Sbjct: 246 FYVLYKGATNCYLPNTNLIKEALTEVKPTVMCAVPRFYEKIFSTVHEKVSRAPAHRKVMF 305
Query: 144 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 203
+ + + ++ EG K+PS+ IL + +A+KLV
Sbjct: 306 TWAVNMGAKMSVCQQ--EG-------KEPSW---------------ILKQSYKVADKLVL 341
Query: 204 KKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 262
K++ +G + + GG L + I F+ A+GV V++GYG+TE++ I+
Sbjct: 342 SKLRMILGGNINFMPCGGAKLDVTIGRFFHALGVNVKLGYGMTETTATISCWEDGKFHPD 401
Query: 263 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 322
S+G + E+KI E +E+L VRG VM+GY+ P T+ EDG+L T
Sbjct: 402 SIGTLMPGAEVKI--GENSEIL---------VRGPMVMKGYYNKPEETESNFTEDGFLKT 450
Query: 323 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 382
GD G G L + R K+ + S G+ + P +E A + I QI V
Sbjct: 451 GDAGEF----------DADGNLYITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAV 500
Query: 383 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 434
I ++ A+IVP + + AK L+I + D EL K EK ++ L EL ++
Sbjct: 501 IADTRKFVSALIVPCYDALEEYAKELNIAYHDRMELVKHSEIVEMLEKRVANLQKELARF 560
Query: 435 TSKCSFQI 442
F +
Sbjct: 561 EQVKKFTL 568
>gi|422430433|ref|ZP_16507314.1| AMP-binding enzyme [Propionibacterium acnes HL072PA2]
gi|422533384|ref|ZP_16609322.1| AMP-binding enzyme [Propionibacterium acnes HL072PA1]
gi|314979072|gb|EFT23166.1| AMP-binding enzyme [Propionibacterium acnes HL072PA2]
gi|315089618|gb|EFT61594.1| AMP-binding enzyme [Propionibacterium acnes HL072PA1]
Length = 646
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 200/408 (49%), Gaps = 59/408 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAENGDKFLSMLPPWHVYER 81
DD+A +YTSGTTG PKGVM++H+ L ++++L +D+ PA D LS LP H E
Sbjct: 215 DDVAALIYTSGTTGEPKGVMISHRAALAELQALDAFFDVTPA---DHSLSFLPLSHALEW 271
Query: 82 ACGYFIFSRGIELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
+ G + T V N K L +P +SVP +YE + S + ++ + S A
Sbjct: 272 GWSMAVIRHGC--LNTFVPNPKTISAMLAEVRPTLFVSVPKLYEQVMS-VAREKVSDSPA 328
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
+ + IRI E + + ++PS L AR H +A
Sbjct: 329 KLKIFEWSIRIG---------REWWQAEQEGRRPSVS------LRAR---------HGVA 364
Query: 199 EKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
++LV K I+ AIG K ++ GG+ L ++ F+ A G+ V GYGLTE+SP+++ P
Sbjct: 365 DRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLLVCQGYGLTEASPLVSFNSPG 424
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
G+ G P+ +++ E E+L RG VM+GY+K P AT A+ ED
Sbjct: 425 GYKFGTAGRPLVGSQMTTT--EDGEIL---------YRGPNVMKGYWKAPEATAAAI-ED 472
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GWL+TGDIG I G LV+ R KD IV G+N+ P +E + ++ L
Sbjct: 473 GWLHTGDIGHIDED----------GFLVITDRLKDIIVTLNGKNISPQPIENSLMKDPLF 522
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS 425
V++G ++ ++ P +V A+RL I E+ + + ++
Sbjct: 523 EHAVLLGDNRPCLTLLVKPSLPQVEELAERLHITSMTGPEMLRSEELA 570
>gi|422548906|ref|ZP_16624714.1| AMP-binding enzyme [Propionibacterium acnes HL050PA1]
gi|314919015|gb|EFS82846.1| AMP-binding enzyme [Propionibacterium acnes HL050PA1]
Length = 646
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 200/408 (49%), Gaps = 59/408 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAENGDKFLSMLPPWHVYER 81
DD+A +YTSGTTG PKGVM++H+ L ++++L +D+ PA D LS LP H E
Sbjct: 215 DDVAALIYTSGTTGEPKGVMISHRAALAELQALDAFFDVTPA---DHSLSFLPLSHALEW 271
Query: 82 ACGYFIFSRGIELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
+ G + T V N K L +P +SVP +YE + S + ++ + S A
Sbjct: 272 GWSMAVIRHGC--LNTFVPNPKTISAMLAEVRPTLFVSVPKLYEQVMS-VAREKVSDSPA 328
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
+ + IRI E + + ++PS L AR H +A
Sbjct: 329 KLKIFEWSIRIG---------REWWQAEQEGRRPSVS------LRAR---------HGVA 364
Query: 199 EKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
++LV K I+ AIG K ++ GG+ L ++ F+ A G+ V GYGLTE+SP+++ P
Sbjct: 365 DRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLLVCQGYGLTEASPLVSFNSPG 424
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
G+ G P+ +++ E E+L RG VM+GY+K P AT A+ ED
Sbjct: 425 GYKFGTAGRPLVGSQMTTT--EDGEIL---------YRGPNVMKGYWKAPEATAAAI-ED 472
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GWL+TGDIG I G LV+ R KD IV G+N+ P +E + ++ L
Sbjct: 473 GWLHTGDIGHIDED----------GFLVITDRLKDIIVTLNGKNISPQPIENSLMKDPLF 522
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS 425
V++G ++ ++ P +V A+RL I E+ + + ++
Sbjct: 523 EHAVLLGDNRPCLTLLVKPSLPQVEELAERLHITSMTGPEMLRSEELA 570
>gi|422394515|ref|ZP_16474556.1| putative CoA ligase [Propionibacterium acnes HL097PA1]
gi|422437290|ref|ZP_16514137.1| AMP-binding enzyme [Propionibacterium acnes HL092PA1]
gi|422492750|ref|ZP_16569055.1| AMP-binding enzyme [Propionibacterium acnes HL086PA1]
gi|422514961|ref|ZP_16591079.1| AMP-binding enzyme [Propionibacterium acnes HL110PA2]
gi|422523902|ref|ZP_16599913.1| AMP-binding enzyme [Propionibacterium acnes HL053PA2]
gi|422530289|ref|ZP_16606250.1| AMP-binding enzyme [Propionibacterium acnes HL110PA1]
gi|422544310|ref|ZP_16620150.1| AMP-binding enzyme [Propionibacterium acnes HL082PA1]
gi|313794135|gb|EFS42155.1| AMP-binding enzyme [Propionibacterium acnes HL110PA1]
gi|313803257|gb|EFS44453.1| AMP-binding enzyme [Propionibacterium acnes HL110PA2]
gi|313839211|gb|EFS76925.1| AMP-binding enzyme [Propionibacterium acnes HL086PA1]
gi|314964031|gb|EFT08131.1| AMP-binding enzyme [Propionibacterium acnes HL082PA1]
gi|315078278|gb|EFT50317.1| AMP-binding enzyme [Propionibacterium acnes HL053PA2]
gi|327334413|gb|EGE76124.1| putative CoA ligase [Propionibacterium acnes HL097PA1]
gi|327457568|gb|EGF04223.1| AMP-binding enzyme [Propionibacterium acnes HL092PA1]
Length = 646
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 200/408 (49%), Gaps = 59/408 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAENGDKFLSMLPPWHVYER 81
DD+A +YTSGTTG PKGVM++H+ L ++++L +D+ PA D LS LP H E
Sbjct: 215 DDVAALIYTSGTTGEPKGVMISHRAALAELQALDAFFDVTPA---DHSLSFLPLSHALEW 271
Query: 82 ACGYFIFSRGIELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
+ G + T V N K L +P +SVP +YE + S + ++ + S A
Sbjct: 272 GWSMAVIRHGC--LNTFVPNPKTISAMLAEVRPTLFVSVPKLYEQVMS-VAREKVSDSPA 328
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
+ + IRI E + + ++PS L AR H +A
Sbjct: 329 KLKIFEWSIRIG---------REWWQAEQEGRRPSVS------LRAR---------HGVA 364
Query: 199 EKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
++LV K I+ AIG K ++ GG+ L ++ F+ A G+ V GYGLTE+SP+++ P
Sbjct: 365 DRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLLVCQGYGLTEASPLVSFNSPG 424
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
G+ G P+ +++ E E+L RG VM+GY+K P AT A+ ED
Sbjct: 425 GYKFGTAGRPLVGSQMTTT--EDGEIL---------YRGPNVMKGYWKAPEATAAAI-ED 472
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GWL+TGDIG I G LV+ R KD IV G+N+ P +E + ++ L
Sbjct: 473 GWLHTGDIGHIDED----------GFLVITDRLKDIIVTLNGKNISPQPIENSLMKDPLF 522
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS 425
V++G ++ ++ P +V A+RL I E+ + + ++
Sbjct: 523 EHAVLLGDNRPCLTLLVKPSLPQVEELAERLHITSMTGPEMLRSEELA 570
>gi|422494783|ref|ZP_16571078.1| AMP-binding enzyme [Propionibacterium acnes HL025PA1]
gi|313813943|gb|EFS51657.1| AMP-binding enzyme [Propionibacterium acnes HL025PA1]
Length = 646
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 200/408 (49%), Gaps = 59/408 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAENGDKFLSMLPPWHVYER 81
DD+A +YTSGTTG PKGVM++H+ L ++++L +D+ PA D LS LP H E
Sbjct: 215 DDVAALIYTSGTTGEPKGVMISHRAALAELQALDAFFDVTPA---DHSLSFLPLSHALEW 271
Query: 82 ACGYFIFSRGIELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
+ G + T V N K L +P +SVP +YE + S + ++ + S A
Sbjct: 272 GWSMAVIRHGC--LNTFVPNPKTISAMLAEVRPTLFVSVPKLYEQVMS-VAREKVSDSPA 328
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
+ + IRI E + + ++PS L AR H +A
Sbjct: 329 KLKIFEWSIRIG---------REWWQAEQEGRRPSVS------LRAR---------HGVA 364
Query: 199 EKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
++LV K I+ AIG K ++ GG+ L ++ F+ A G+ V GYGLTE+SP+++ P
Sbjct: 365 DRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLLVCQGYGLTEASPLVSFNSPG 424
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
G+ G P+ +++ E E+L RG VM+GY+K P AT A+ ED
Sbjct: 425 GYKFGTAGRPLVGSQMTTT--EDGEIL---------YRGPNVMKGYWKAPEATAAAI-ED 472
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GWL+TGDIG I G LV+ R KD IV G+N+ P +E + ++ L
Sbjct: 473 GWLHTGDIGHIDED----------GFLVITDRLKDIIVTLNGKNISPQPIENSLMKDPLF 522
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS 425
V++G ++ ++ P +V A+RL I E+ + + ++
Sbjct: 523 EHAVLLGDNRPCLTLLVKPSLPQVEELAERLHITSMTGPEMLRSEELA 570
>gi|289548140|ref|YP_003473128.1| AMP-dependent synthetase and ligase [Thermocrinis albus DSM 14484]
gi|289181757|gb|ADC89001.1| AMP-dependent synthetase and ligase [Thermocrinis albus DSM 14484]
Length = 828
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 130/396 (32%), Positives = 195/396 (49%), Gaps = 81/396 (20%)
Query: 26 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 85
D+A +YTSGTTG PKGVMLT KN+L IRS+ + A + D L++LP H Y
Sbjct: 146 DVALILYTSGTTGKPKGVMLTFKNILSNIRSVEKLKMAGSEDSTLALLPFHHAYPLVVSL 205
Query: 86 FIFSRG----IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 141
+ + L + +L +QR++ +I VP +Y+ L++ I +++ S+ R
Sbjct: 206 LLPLYLGATIVFLERLSTEDLMRTMQRHRITVLIGVPRLYQVLHARIMERVKASAVGR-- 263
Query: 142 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 201
+L L +L P+ L KL
Sbjct: 264 --------------------------------FLFLLSPYL----------PMGL--RKL 279
Query: 202 VYKKIQSAIGIS-KAGVSGGGSLPMHI--DLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
+++++ SA G + + VSGG +LP+ + DL Y +G V GYGLTE+SP+++ P
Sbjct: 280 LFRRVHSAFGGNLRYMVSGGAALPLQVAKDLTY--LGFTVLEGYGLTETSPIVSFNPPHR 337
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
LGSVG PI +KI A EVL VRG VM+GY+K P TK+A DG
Sbjct: 338 IKLGSVGTPIEEVYVKI--APDGEVL---------VRGVNVMKGYYKRPEDTKKAF-VDG 385
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
W TGD+G++ G L + GR K+ IVL G+ V P ELE+ LR S +
Sbjct: 386 WFMTGDLGYLD----------QDGYLYITGRKKEIIVLPDGKKVNPEELEDLILRESPVV 435
Query: 379 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 414
+ V + + + A++VPD E+V K++ IV+ +
Sbjct: 436 KEVGVLEMEGVLHALLVPDMEKV----KQMGIVNLE 467
>gi|357976340|ref|ZP_09140311.1| AMP-dependent synthetase and ligase [Sphingomonas sp. KC8]
Length = 598
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 131/442 (29%), Positives = 210/442 (47%), Gaps = 64/442 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENG---DKFLSMLPPWHVYER 81
+D+A +YTSGT G+P+GV H +LH + I+ + G + FLS LP H YE
Sbjct: 179 EDLACIIYTSGTGGSPRGVRQHHGAILHNVAGCTTIISEDFGWDDEVFLSFLPLSHAYEH 238
Query: 82 ACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
+ G +F G ++ Y+ + L +++ +P M+ VP ++E L + ++ S +
Sbjct: 239 SGGQHFPIGLGAQIYYSEGLEKLAANIEEVRPTIMVVVPRLFEVL----RARVLKSVEKQ 294
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
VA+ L+R L QK + + L DW P+ ++
Sbjct: 295 GRVAQYLMR--------------RALVIGQKDYAGRMPLWDW-----------PMEMILR 329
Query: 200 KLVYKKI-QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
+ + K+ Q G KA VSGG L + LF+ ++G+ GYG TE++PVI+ RP+
Sbjct: 330 RTLKPKVGQRFGGRMKAMVSGGAPLNPEVGLFFHSLGLTFLQGYGQTEAAPVISCNRPSA 389
Query: 259 NV-LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
+ + +VG P+ E++I D G + VRG VM GY++N T + L D
Sbjct: 390 GIKMDTVGPPLPGVEVRIAD-----------DGEILVRGELVMHGYWRNEEETARVL-RD 437
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GWL+TGD+G I +RGR +V+ R KD IV G+NV P ++E I
Sbjct: 438 GWLHTGDVGHI---DARGR-------IVITDRKKDIIVNDKGDNVAPQKVEGMLTLEPEI 487
Query: 378 RQIVVIGQDQRRPG--AIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT 435
Q ++ G RRP +IVPD E A + + A+ + + L + +
Sbjct: 488 LQAMIAG--DRRPHIVGLIVPDPEWAREWAGAEGVAYDPAALRADPRFQKALMAAVDRVN 545
Query: 436 SKCSF--QIGPIHVVDEPFTVN 455
+ S ++ I + DEPFT+
Sbjct: 546 TSLSVIEKVRRILIADEPFTIE 567
>gi|433648555|ref|YP_007293557.1| AMP-forming long-chain acyl-CoA synthetase [Mycobacterium smegmatis
JS623]
gi|433298332|gb|AGB24152.1| AMP-forming long-chain acyl-CoA synthetase [Mycobacterium smegmatis
JS623]
Length = 598
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 117/376 (31%), Positives = 181/376 (48%), Gaps = 53/376 (14%)
Query: 28 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDKFLSMLPPWHVYERACGY 85
AT +YTSGTTG PKG LTH NL+++IR D PA + G++ L LP HV RA
Sbjct: 184 ATLIYTSGTTGRPKGCQLTHSNLMYEIRGAKDCFPALLDKGERMLVFLPLAHVLARAITL 243
Query: 86 FIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 144
F+ + L +T+ ++NL ++P ++SVP V+E +Y+ ++ + + +
Sbjct: 244 ACFANKVTLGFTSDIKNLVPTFGVFKPTLVVSVPRVFEKVYNTAEQN--ARNDGKGAIFE 301
Query: 145 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 204
+ + Y+ Q Q S L+ L H L ++LVY
Sbjct: 302 RAVNTAIEYS--------------QAQDSGGAGLL-----------LRAKHALFDRLVYG 336
Query: 205 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 263
K+++A+G + + +SGG L + FY +G+ + GYGLTE+S I R +GS
Sbjct: 337 KLRAALGGNCRGAISGGAPLGARLGHFYRGVGLTIYEGYGLTETSAAITVNRIDDVKVGS 396
Query: 264 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 323
VG + +++ D +E+L V+G V GY+ N T +A+ DGW +TG
Sbjct: 397 VGKLVPGNSMRLAD--DDELL---------VKGGVVFSGYWHNEEET-EAVFSDGWFHTG 444
Query: 324 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 383
D+G I G L + GR K+ IV + G+NV P LE+ LI Q + +
Sbjct: 445 DLGAIDDD----------GFLTIVGRKKEIIVTAGGKNVAPALLEDRLRAHPLISQAMCV 494
Query: 384 GQDQRRPGAIIVPDKE 399
G Q A+I D E
Sbjct: 495 GDAQPFIAALITIDPE 510
>gi|329946444|ref|ZP_08293987.1| AMP-binding enzyme, partial [Actinomyces sp. oral taxon 170 str.
F0386]
gi|328527266|gb|EGF54268.1| AMP-binding enzyme [Actinomyces sp. oral taxon 170 str. F0386]
Length = 563
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 122/406 (30%), Positives = 193/406 (47%), Gaps = 54/406 (13%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLL----HQIRSLYDIVPAENGDKFLSMLPPWHVYE 80
DD+ + +YTSGTTG PKGV LTH+N + H +R L ++ N + L LP HVY
Sbjct: 182 DDVYSIIYTSGTTGRPKGVRLTHRNAVGIPYHGVRYLPGVLWGGN-VRLLLFLPLAHVYA 240
Query: 81 RACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 139
R + L +T V+ L DLQ + P Y+++VP V E +Y+ + +R
Sbjct: 241 RCLQLLSLAGEGVLGHTPDVKTLLPDLQSFAPSYVLAVPRVLEKIYNAADAK--AGGGSR 298
Query: 140 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 199
+ R +++ AY+ +G +R +Q H +A+
Sbjct: 299 LKLFRWAAKVAIAYSRALDTSDG--PSRRLRQA----------------------HAVAD 334
Query: 200 KLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 258
+LV+++I++ +G ++ +SGGG L + FY +G+ + GYGLTE+ ++
Sbjct: 335 RLVFRRIRALMGPNARFIISGGGPLGQRLGHFYRGLGLVILEGYGLTETIGPVSVNTDWL 394
Query: 259 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 318
N +G+VG P+ EI+I E +E ++VRG V Y NP AT + DG
Sbjct: 395 NKIGTVGPPVCGNEIRI--GEDDE---------IQVRGLGVFSTYHNNPEATADSFTADG 443
Query: 319 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 378
W TGDIG + G L + GR K+ IV + G+NV P +LE+ LI
Sbjct: 444 WFRTGDIGALDED----------GYLRITGRKKELIVTAGGKNVAPTQLEDRLRGHPLIS 493
Query: 379 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 424
Q++V+G + A+I DKE + + + D E S +
Sbjct: 494 QVLVVGDGEPFISALITLDKEMLPQWLRNHGLAAMDVVEASTHPQV 539
>gi|335055097|ref|ZP_08547887.1| AMP-binding enzyme [Propionibacterium sp. 434-HC2]
gi|365963859|ref|YP_004945425.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes TypeIA2 P.acn31]
gi|365966099|ref|YP_004947664.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes TypeIA2 P.acn17]
gi|387504596|ref|YP_005945825.1| putative long-chain-fatty-acid--CoA ligase/synthetase
[Propionibacterium acnes 6609]
gi|407936605|ref|YP_006852247.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes C1]
gi|422383826|ref|ZP_16463967.1| AMP-binding family protein [Propionibacterium acnes HL096PA3]
gi|422426562|ref|ZP_16503482.1| AMP-binding enzyme [Propionibacterium acnes HL087PA1]
gi|422431738|ref|ZP_16508609.1| AMP-binding enzyme [Propionibacterium acnes HL059PA2]
gi|422434480|ref|ZP_16511338.1| AMP-binding enzyme [Propionibacterium acnes HL083PA2]
gi|422442966|ref|ZP_16519767.1| AMP-binding enzyme [Propionibacterium acnes HL002PA1]
gi|422445214|ref|ZP_16521967.1| AMP-binding enzyme [Propionibacterium acnes HL027PA1]
gi|422448125|ref|ZP_16524857.1| AMP-binding enzyme [Propionibacterium acnes HL036PA3]
gi|422449813|ref|ZP_16526534.1| AMP-binding enzyme [Propionibacterium acnes HL030PA2]
gi|422452652|ref|ZP_16529349.1| AMP-binding enzyme [Propionibacterium acnes HL087PA3]
gi|422455623|ref|ZP_16532293.1| AMP-binding enzyme [Propionibacterium acnes HL030PA1]
gi|422479039|ref|ZP_16555450.1| AMP-binding enzyme [Propionibacterium acnes HL063PA1]
gi|422482169|ref|ZP_16558568.1| AMP-binding enzyme [Propionibacterium acnes HL036PA1]
gi|422489693|ref|ZP_16566020.1| AMP-binding enzyme [Propionibacterium acnes HL020PA1]
gi|422496633|ref|ZP_16572915.1| AMP-binding enzyme [Propionibacterium acnes HL002PA3]
gi|422499723|ref|ZP_16575981.1| AMP-binding enzyme [Propionibacterium acnes HL063PA2]
gi|422501800|ref|ZP_16578049.1| AMP-binding enzyme [Propionibacterium acnes HL027PA2]
gi|422505286|ref|ZP_16581517.1| AMP-binding enzyme [Propionibacterium acnes HL036PA2]
gi|422507577|ref|ZP_16583759.1| AMP-binding enzyme [Propionibacterium acnes HL046PA2]
gi|422509591|ref|ZP_16585747.1| AMP-binding enzyme [Propionibacterium acnes HL059PA1]
gi|422512267|ref|ZP_16588400.1| AMP-binding enzyme [Propionibacterium acnes HL087PA2]
gi|422538955|ref|ZP_16614829.1| AMP-binding enzyme [Propionibacterium acnes HL013PA1]
gi|422541835|ref|ZP_16617691.1| AMP-binding enzyme [Propionibacterium acnes HL037PA1]
gi|422546754|ref|ZP_16622578.1| AMP-binding enzyme [Propionibacterium acnes HL050PA3]
gi|422552786|ref|ZP_16628574.1| AMP-binding enzyme [Propionibacterium acnes HL005PA3]
gi|422556133|ref|ZP_16631892.1| AMP-binding enzyme [Propionibacterium acnes HL005PA2]
gi|422556623|ref|ZP_16632375.1| AMP-binding enzyme [Propionibacterium acnes HL025PA2]
gi|422561513|ref|ZP_16637198.1| AMP-binding enzyme [Propionibacterium acnes HL046PA1]
gi|422567888|ref|ZP_16643513.1| AMP-binding enzyme [Propionibacterium acnes HL002PA2]
gi|422569205|ref|ZP_16644820.1| AMP-binding enzyme [Propionibacterium acnes HL067PA1]
gi|422577342|ref|ZP_16652876.1| AMP-binding enzyme [Propionibacterium acnes HL005PA4]
gi|313765156|gb|EFS36520.1| AMP-binding enzyme [Propionibacterium acnes HL013PA1]
gi|313808590|gb|EFS47050.1| AMP-binding enzyme [Propionibacterium acnes HL087PA2]
gi|313817120|gb|EFS54834.1| AMP-binding enzyme [Propionibacterium acnes HL059PA1]
gi|313819065|gb|EFS56779.1| AMP-binding enzyme [Propionibacterium acnes HL046PA2]
gi|313821657|gb|EFS59371.1| AMP-binding enzyme [Propionibacterium acnes HL036PA1]
gi|313823792|gb|EFS61506.1| AMP-binding enzyme [Propionibacterium acnes HL036PA2]
gi|313826896|gb|EFS64610.1| AMP-binding enzyme [Propionibacterium acnes HL063PA1]
gi|313829267|gb|EFS66981.1| AMP-binding enzyme [Propionibacterium acnes HL063PA2]
gi|314916839|gb|EFS80670.1| AMP-binding enzyme [Propionibacterium acnes HL005PA4]
gi|314921153|gb|EFS84984.1| AMP-binding enzyme [Propionibacterium acnes HL050PA3]
gi|314926132|gb|EFS89963.1| AMP-binding enzyme [Propionibacterium acnes HL036PA3]
gi|314932500|gb|EFS96331.1| AMP-binding enzyme [Propionibacterium acnes HL067PA1]
gi|314956271|gb|EFT00643.1| AMP-binding enzyme [Propionibacterium acnes HL027PA1]
gi|314958768|gb|EFT02870.1| AMP-binding enzyme [Propionibacterium acnes HL002PA1]
gi|314960972|gb|EFT05073.1| AMP-binding enzyme [Propionibacterium acnes HL002PA2]
gi|314968795|gb|EFT12893.1| AMP-binding enzyme [Propionibacterium acnes HL037PA1]
gi|314985948|gb|EFT30040.1| AMP-binding enzyme [Propionibacterium acnes HL005PA2]
gi|314989257|gb|EFT33348.1| AMP-binding enzyme [Propionibacterium acnes HL005PA3]
gi|315084943|gb|EFT56919.1| AMP-binding enzyme [Propionibacterium acnes HL027PA2]
gi|315087473|gb|EFT59449.1| AMP-binding enzyme [Propionibacterium acnes HL002PA3]
gi|315100054|gb|EFT72030.1| AMP-binding enzyme [Propionibacterium acnes HL059PA2]
gi|315102786|gb|EFT74762.1| AMP-binding enzyme [Propionibacterium acnes HL046PA1]
gi|315107340|gb|EFT79316.1| AMP-binding enzyme [Propionibacterium acnes HL030PA1]
gi|315110512|gb|EFT82488.1| AMP-binding enzyme [Propionibacterium acnes HL030PA2]
gi|327333995|gb|EGE75710.1| AMP-binding family protein [Propionibacterium acnes HL096PA3]
gi|327455527|gb|EGF02182.1| AMP-binding enzyme [Propionibacterium acnes HL087PA3]
gi|327456182|gb|EGF02837.1| AMP-binding enzyme [Propionibacterium acnes HL083PA2]
gi|328756809|gb|EGF70425.1| AMP-binding enzyme [Propionibacterium acnes HL087PA1]
gi|328757697|gb|EGF71313.1| AMP-binding enzyme [Propionibacterium acnes HL020PA1]
gi|328759092|gb|EGF72708.1| AMP-binding enzyme [Propionibacterium acnes HL025PA2]
gi|333762704|gb|EGL40190.1| AMP-binding enzyme [Propionibacterium sp. 434-HC2]
gi|335278641|gb|AEH30546.1| putative long-chain-fatty-acid--CoA ligase/synthetase
[Propionibacterium acnes 6609]
gi|365740540|gb|AEW84742.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes TypeIA2 P.acn31]
gi|365742780|gb|AEW82474.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes TypeIA2 P.acn17]
gi|407905186|gb|AFU42016.1| putative long-chain-fatty-acid--CoA ligase/synthetase
[Propionibacterium acnes C1]
Length = 646
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 200/408 (49%), Gaps = 59/408 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAENGDKFLSMLPPWHVYER 81
DD+A +YTSGTTG PKGVM++H+ L ++++L +D+ PA D LS LP H E
Sbjct: 215 DDVAALIYTSGTTGEPKGVMISHRAALAELQALDAFFDVTPA---DHSLSFLPLSHALEW 271
Query: 82 ACGYFIFSRGIELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
+ G + T V N K L +P +SVP +YE + S + ++ + S A
Sbjct: 272 GWSMAVIRHGC--LNTFVPNPKTISAMLAEVRPTLFVSVPKLYEQVMS-VAREKVSDSPA 328
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
+ + IRI E + + ++PS L AR H +A
Sbjct: 329 KLKIFEWSIRIG---------REWWQAEQEGRRPSVS------LRAR---------HGVA 364
Query: 199 EKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
++LV K I+ AIG K ++ GG+ L ++ F+ A G+ V GYGLTE+SP+++ P
Sbjct: 365 DRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLLVCQGYGLTEASPLVSFNSPG 424
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
G+ G P+ +++ E E+L RG VM+GY+K P AT A+ ED
Sbjct: 425 GYKFGTAGRPLVGSQMTTT--EDGEIL---------YRGPNVMKGYWKAPEATAAAI-ED 472
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GWL+TGDIG I G LV+ R KD IV G+N+ P +E + ++ L
Sbjct: 473 GWLHTGDIGHIDED----------GFLVITDRLKDIIVTLNGKNISPQPIENSLMKDPLF 522
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS 425
V++G ++ ++ P +V A+RL I E+ + + ++
Sbjct: 523 EHAVLLGDNRPCLTLLVKPSLPQVEELAERLHITSMTGPEMLRSEELA 570
>gi|419420112|ref|ZP_13960341.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes PRP-38]
gi|379978486|gb|EIA11810.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes PRP-38]
Length = 644
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 200/408 (49%), Gaps = 59/408 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAENGDKFLSMLPPWHVYER 81
DD+A +YTSGTTG PKGVM++H+ L ++++L +D+ PA D LS LP H E
Sbjct: 213 DDVAALIYTSGTTGEPKGVMISHRAALAELQALDAFFDVTPA---DHSLSFLPLSHALEW 269
Query: 82 ACGYFIFSRGIELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
+ G + T V N K L +P +SVP +YE + S + ++ + S A
Sbjct: 270 GWSMAVIRHGC--LNTFVPNPKTISAMLAEVRPTLFVSVPKLYEQVMS-VAREKVSDSPA 326
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
+ + IRI E + + ++PS L AR H +A
Sbjct: 327 KLKIFEWSIRIG---------REWWQAEQEGRRPSVS------LRAR---------HGVA 362
Query: 199 EKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
++LV K I+ AIG K ++ GG+ L ++ F+ A G+ V GYGLTE+SP+++ P
Sbjct: 363 DRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLLVCQGYGLTEASPLVSFNSPG 422
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
G+ G P+ +++ E E+L RG VM+GY+K P AT A+ ED
Sbjct: 423 GYKFGTAGRPLVGSQMTTT--EDGEIL---------YRGPNVMKGYWKAPEATAAAI-ED 470
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GWL+TGDIG I G LV+ R KD IV G+N+ P +E + ++ L
Sbjct: 471 GWLHTGDIGHIDED----------GFLVITDRLKDIIVTLNGKNISPQPIENSLMKDPLF 520
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS 425
V++G ++ ++ P +V A+RL I E+ + + ++
Sbjct: 521 EHAVLLGDNRPCLTLLVKPSLPQVEELAERLHITSMTGPEMLRSEELA 568
>gi|422486485|ref|ZP_16562831.1| AMP-binding enzyme [Propionibacterium acnes HL013PA2]
gi|327450368|gb|EGE97022.1| AMP-binding enzyme [Propionibacterium acnes HL013PA2]
Length = 646
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 200/408 (49%), Gaps = 59/408 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAENGDKFLSMLPPWHVYER 81
DD+A +YTSGTTG PKGVM++H+ L ++++L +D+ PA D LS LP H E
Sbjct: 215 DDVAALIYTSGTTGEPKGVMISHRAALAELQALDAFFDVTPA---DHSLSFLPLSHALEW 271
Query: 82 ACGYFIFSRGIELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
+ G + T V N K L +P +SVP +YE + S + ++ + S A
Sbjct: 272 GWSMAVIRHGC--LNTFVPNPKTISAMLAEVRPTLFVSVPKLYEQVMS-VAREKVSDSPA 328
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
+ + IRI E + + ++PS L AR H +A
Sbjct: 329 KLKIFEWSIRIG---------REWWQAEQEGRRPSVS------LRAR---------HGVA 364
Query: 199 EKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
++LV K I+ AIG K ++ GG+ L ++ F+ A G+ V GYGLTE+SP+++ P
Sbjct: 365 DRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLLVCQGYGLTEASPLVSFNSPG 424
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
G+ G P+ +++ E E+L RG VM+GY+K P AT A+ ED
Sbjct: 425 GYKFGTAGRPLVGSQMTTT--EDGEIL---------YRGPNVMKGYWKAPEATAAAI-ED 472
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GWL+TGDIG I G LV+ R KD IV G+N+ P +E + ++ L
Sbjct: 473 GWLHTGDIGHIDED----------GFLVITDRLKDIIVTLNGKNISPQPIENSLMKDPLF 522
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS 425
V++G ++ ++ P +V A+RL I E+ + + ++
Sbjct: 523 EHAVLLGNNRPCLTLLVKPSLPQVEELAERLHITSMTGPEMLRSEELA 570
>gi|334336613|ref|YP_004541765.1| long-chain-fatty-acid--CoA ligase [Isoptericola variabilis 225]
gi|334106981|gb|AEG43871.1| Long-chain-fatty-acid--CoA ligase [Isoptericola variabilis 225]
Length = 608
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 118/394 (29%), Positives = 185/394 (46%), Gaps = 66/394 (16%)
Query: 18 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP---AENGDKFLSMLP 74
+ + +G DD+AT +YTSG+TG PKG LTH N H + +P +G + + LP
Sbjct: 173 RRDAVGRDDLATIIYTSGSTGRPKGAELTHGNFAHLALNARLALPDLLGRDGSRTVLFLP 232
Query: 75 PWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 133
HV+ R + S L + V+ L DL ++P ++++VP V+E +Y+ +++
Sbjct: 233 LAHVFARLIQVAVVSGDAVLGHLPDVKTLVADLGTFRPTFLLAVPRVFEKVYNSAEQKAA 292
Query: 134 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 193
+S RR+ FA+ A + W+R + P
Sbjct: 293 SSPLKRRL---------FAWAAD----------------------VAGRWSRAVDTGAVP 321
Query: 194 L-----HLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTES 247
H LA++LVY+ +++A+G + +SGG L + F+ +GV + GYGLTE+
Sbjct: 322 TGLRLQHALADRLVYRALRAAMGGRVEHAISGGAPLGERLGHFFRGVGVTILEGYGLTET 381
Query: 248 SPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNP 307
+ A P +G+VG T I+I D G V + G V +GY P
Sbjct: 382 TAPTAVNLPGAVRIGTVGPAFPGTSIRIDD-----------DGEVLLGGPHVFRGYRGAP 430
Query: 308 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 367
T +AL +DGW TGD+G + G L + GR K+ IV + G+NV P L
Sbjct: 431 ERTAEALKDDGWFRTGDLGTL----------DTDGYLRITGRKKEIIVTAGGKNVAPAVL 480
Query: 368 EEAALRSSLIRQIVVIGQDQRRP--GAIIVPDKE 399
E+ L+ Q+VV+G RRP A++ D E
Sbjct: 481 EDGLRAHPLVSQVVVVG--DRRPFVAALVTLDAE 512
>gi|50843669|ref|YP_056896.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes KPA171202]
gi|289425916|ref|ZP_06427668.1| AMP-binding enzyme [Propionibacterium acnes SK187]
gi|289428166|ref|ZP_06429865.1| AMP-binding enzyme [Propionibacterium acnes J165]
gi|365975037|ref|YP_004956596.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes TypeIA2 P.acn33]
gi|386025164|ref|YP_005943470.1| putative long-chain-fatty-acid--CoA ligase [Propionibacterium acnes
266]
gi|50841271|gb|AAT83938.1| putative long-chain-fatty-acid--CoA ligase/synthetase
[Propionibacterium acnes KPA171202]
gi|289153692|gb|EFD02401.1| AMP-binding enzyme [Propionibacterium acnes SK187]
gi|289158646|gb|EFD06850.1| AMP-binding enzyme [Propionibacterium acnes J165]
gi|332676623|gb|AEE73439.1| putative long-chain-fatty-acid--CoA ligase [Propionibacterium acnes
266]
gi|365745036|gb|AEW80233.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes TypeIA2 P.acn33]
Length = 644
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 200/408 (49%), Gaps = 59/408 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAENGDKFLSMLPPWHVYER 81
DD+A +YTSGTTG PKGVM++H+ L ++++L +D+ PA D LS LP H E
Sbjct: 213 DDVAALIYTSGTTGEPKGVMISHRAALAELQALDAFFDVTPA---DHSLSFLPLSHALEW 269
Query: 82 ACGYFIFSRGIELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
+ G + T V N K L +P +SVP +YE + S + ++ + S A
Sbjct: 270 GWSMAVIRHGC--LNTFVPNPKTISAMLAEVRPTLFVSVPKLYEQVMS-VAREKVSDSPA 326
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
+ + IRI E + + ++PS L AR H +A
Sbjct: 327 KLKIFEWSIRIG---------REWWQAEQEGRRPSVS------LRAR---------HGVA 362
Query: 199 EKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
++LV K I+ AIG K ++ GG+ L ++ F+ A G+ V GYGLTE+SP+++ P
Sbjct: 363 DRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLLVCQGYGLTEASPLVSFNSPG 422
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
G+ G P+ +++ E E+L RG VM+GY+K P AT A+ ED
Sbjct: 423 GYKFGTAGRPLVGSQMTTT--EDGEIL---------YRGPNVMKGYWKAPEATAAAI-ED 470
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GWL+TGDIG I G LV+ R KD IV G+N+ P +E + ++ L
Sbjct: 471 GWLHTGDIGHIDED----------GFLVITDRLKDIIVTLNGKNISPQPIENSLMKDPLF 520
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS 425
V++G ++ ++ P +V A+RL I E+ + + ++
Sbjct: 521 EHAVLLGDNRPCLTLLVKPSLPQVEELAERLHITSMTGPEMLRSEELA 568
>gi|335050302|ref|ZP_08543272.1| AMP-binding enzyme [Propionibacterium sp. 409-HC1]
gi|342211580|ref|ZP_08704305.1| AMP-binding enzyme [Propionibacterium sp. CC003-HC2]
gi|333769965|gb|EGL47044.1| AMP-binding enzyme [Propionibacterium sp. 409-HC1]
gi|340767124|gb|EGR89649.1| AMP-binding enzyme [Propionibacterium sp. CC003-HC2]
Length = 644
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 200/408 (49%), Gaps = 59/408 (14%)
Query: 25 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAENGDKFLSMLPPWHVYER 81
DD+A +YTSGTTG PKGVM++H+ L ++++L +D+ PA D LS LP H E
Sbjct: 213 DDVAALIYTSGTTGEPKGVMISHRAALAELQALDAFFDVTPA---DHSLSFLPLSHALEW 269
Query: 82 ACGYFIFSRGIELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 138
+ G + T V N K L +P +SVP +YE + S + ++ + S A
Sbjct: 270 GWSMAVIRHGC--LNTFVPNPKTISAMLAEVRPTLFVSVPKLYEQVMS-VAREKVSDSPA 326
Query: 139 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 198
+ + IRI E + + ++PS L AR H +A
Sbjct: 327 KLKIFEWSIRIG---------REWWQAEQEGRRPSVS------LRAR---------HGVA 362
Query: 199 EKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 257
++LV K I+ AIG K ++ GG+ L ++ F+ A G+ V GYGLTE+SP+++ P
Sbjct: 363 DRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLLVCQGYGLTEASPLVSFNSPG 422
Query: 258 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 317
G+ G P+ +++ E E+L RG VM+GY+K P AT A+ ED
Sbjct: 423 GYKFGTAGRPLVGSQMTTT--EDGEIL---------YRGPNVMKGYWKAPEATAAAI-ED 470
Query: 318 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 377
GWL+TGDIG I G LV+ R KD IV G+N+ P +E + ++ L
Sbjct: 471 GWLHTGDIGHIDED----------GFLVITDRLKDIIVTLNGKNISPQPIENSLMKDPLF 520
Query: 378 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS 425
V++G ++ ++ P +V A+RL I E+ + + ++
Sbjct: 521 EHAVLLGDNRPCLTLLVKPSLPQVEELAERLHITSMTGPEMLRSEELA 568
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.138 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,318,663,826
Number of Sequences: 23463169
Number of extensions: 310174162
Number of successful extensions: 851023
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 27660
Number of HSP's successfully gapped in prelim test: 17178
Number of HSP's that attempted gapping in prelim test: 721981
Number of HSP's gapped (non-prelim): 101143
length of query: 461
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 315
effective length of database: 8,933,572,693
effective search space: 2814075398295
effective search space used: 2814075398295
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)