Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>012527
MVSILAFASNSSTDSCCTTSSRLSCFAPLLKPNPIKFLKKKPRKCHSFNKILAAAAASSS
SSARQQIEDGSAEQFLENNSIADFMRFKRGSNGGGSGQLQTAVVTYRKKFPWSLLPPFLQ
VDLVSTIHIADKEYFETLQRELELYDCVLYEMVASRESLEKRRNSVDTKKLKGSRSRGFN
ILGCIQRQMARILMLDFQLDCLDYQAENWYHADLDYETFKLLQLEKGESLFTFARDMTLK
STKAMVQPSIPKDLDPWRSKLLWASRVLPMPLVGLLIIGSVCADVGSQPPEYPELEALSM
LDFGAAMKVFLAKRLTSEFTQVTADVEESSVIIGERNRAAIEALRRAIDEGHNRIAILYG
GGHMPDLGRRLREEFDLLPSRVQWITAWSIRNRDLSSSSFPFLKTMAEVLGWPLNRYQTL
ALLIFSSVLALDLWFWELFFGTTVNWISQIASEVHQYVEPM

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  012527
        (461 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2180821 - symbol:AT5G19540 "AT5G19540" species...  1522  3.8e-156  1


>TAIR|locus:2180821 [details] [associations]
            symbol:AT5G19540 "AT5G19540" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AY050845
            EMBL:AY084879 EMBL:AY133822 IPI:IPI00520932 RefSeq:NP_197455.1
            UniGene:At.26677 STRING:Q949W7 PaxDb:Q949W7 PRIDE:Q949W7
            EnsemblPlants:AT5G19540.1 GeneID:832074 KEGG:ath:AT5G19540
            TAIR:At5g19540 eggNOG:NOG268269 HOGENOM:HOG000005935
            InParanoid:Q949W7 OMA:WRSKLLW PhylomeDB:Q949W7
            ProtClustDB:CLSN2686795 ArrayExpress:Q949W7 Genevestigator:Q949W7
            Uniprot:Q949W7
        Length = 462

 Score = 1522 (540.8 bits), Expect = 3.8e-156, P = 3.8e-156
 Identities = 290/399 (72%), Positives = 341/399 (85%)

Query:    65 QQIEDGS-AEQFLENNSIADFMRFKRGSN-GGGSGQLQTAVVTYRKKFPWSLLPPFLQVD 122
             Q  +D S A  FLE+NSIAD+MRFKR  + G G+ +LQTA+V+Y+K+FPW LL PFLQVD
Sbjct:    59 QPSDDASDAALFLESNSIADYMRFKRRPDPGNGTSELQTAIVSYKKRFPWILLNPFLQVD 118

Query:   123 LVSTIHIADKEYFETLQRELELYDCVLYEMVASRESLEKRRNSVDTKKLKGSRSRGFNIL 182
             LVSTIHIADKEYF TLQ+ELE YD +LYEMVAS+E+LE RRN + +K+LK SRSRGF+IL
Sbjct:   119 LVSTIHIADKEYFTTLQKELEPYDSILYEMVASKETLENRRNPIASKRLKSSRSRGFSIL 178

Query:   183 GCIQRQMARILMLDFQLDCLDYQAENWYHADLDYETFKLLQLEKGESLFTFARDMTLKST 242
             G IQRQMAR+L LDFQLDCLDY  ENWYHADLD+ETF+LLQ EKGES F+FARDMT++ST
Sbjct:   179 GFIQRQMARVLTLDFQLDCLDYDTENWYHADLDFETFQLLQKEKGESFFSFARDMTIRST 238

Query:   243 KAMVQPS-IPKDLDPWRSKLLWASRVLPMPLVGLLIIGSVCADVGSQPPEYPELEALSML 301
             KAM+QP+ + +  D WRSKLLW SRV PMPLVGL +IG+ CAD G Q  +YPELEALS L
Sbjct:   239 KAMIQPALVTEGRDTWRSKLLWVSRVFPMPLVGLFLIGAFCADFGDQTSDYPELEALSRL 298

Query:   302 DFGAAMKVFLAKRLTSEFTQVTADVEESSVIIGERNRAAIEALRRAIDEGHNRIAILYGG 361
             DFGAAMKVFLAKRLTSE T  T+D+EE SVIIGERNRAA EALRRAI++GH RI ILYGG
Sbjct:   299 DFGAAMKVFLAKRLTSELTLETSDIEEKSVIIGERNRAATEALRRAIEQGHKRIGILYGG 358

Query:   362 GHMPDLGRRLREEFDLLPSRVQWITAWSIRN-RDLSSSSFPFLKTMAEVLGWPLNRYQTL 420
             GHMPDLGRRLREEFDL+PS V+W+TAWSIRN  DL +SS+P L+ MAE L WPLNRYQTL
Sbjct:   359 GHMPDLGRRLREEFDLVPSEVRWVTAWSIRNPTDLETSSYPILRKMAEALRWPLNRYQTL 418

Query:   421 ALLIFSSVLALDLWFWELFFGTTVNWISQIASEVHQYVE 459
             ALLIFSSVLALDL FWELFFG+T++W +QI +E++Q+++
Sbjct:   419 ALLIFSSVLALDLCFWELFFGSTIDWATQIGAELYQFID 457


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.137   0.413    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      461       433   0.00087  118 3  11 22  0.49    33
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  625 (66 KB)
  Total size of DFA:  273 KB (2143 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  38.85u 0.11s 38.96t   Elapsed:  00:00:02
  Total cpu time:  38.85u 0.11s 38.96t   Elapsed:  00:00:02
  Start:  Mon May 20 22:23:44 2013   End:  Mon May 20 22:23:46 2013

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