Query 012531
Match_columns 461
No_of_seqs 337 out of 1461
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 11:15:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012531.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012531hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3icu_A E3 ubiquitin-protein li 99.9 6.9E-21 2.4E-25 179.1 15.4 125 52-179 38-194 (194)
2 4hyg_A Putative uncharacterize 99.7 2.6E-18 8.9E-23 167.7 5.7 118 314-444 107-239 (301)
3 3iib_A Peptidase M28; YP_92679 99.0 8.7E-10 3E-14 115.5 11.2 129 41-172 58-225 (444)
4 2ek8_A Aminopeptidase; metallo 98.8 1.5E-08 5.2E-13 105.1 12.9 78 82-160 92-181 (421)
5 3kas_A Transferrin receptor pr 98.4 3.1E-07 1.1E-11 100.4 7.9 78 82-161 107-230 (640)
6 3fed_A Glutamate carboxypeptid 98.4 2.9E-07 1E-11 101.6 7.5 79 81-161 125-267 (707)
7 3i6s_A Subtilisin-like proteas 98.4 6E-07 2E-11 98.4 8.7 89 83-171 257-355 (649)
8 1xf1_A C5A peptidase, SCP; hyd 98.0 1.6E-05 5.6E-10 90.3 11.8 82 84-171 261-352 (926)
9 1y9z_A Alkaline serine proteas 97.9 2E-05 7E-10 82.0 8.9 75 94-170 258-356 (441)
10 3vta_A Cucumisin; subtilisin-l 92.9 0.11 3.8E-06 56.3 6.1 69 94-165 268-343 (621)
11 3gx8_A Monothiol glutaredoxin- 38.4 63 0.0022 26.8 6.2 27 104-130 15-47 (121)
12 3ipz_A Monothiol glutaredoxin- 34.2 59 0.002 26.2 5.2 59 104-163 17-97 (109)
13 3zyw_A Glutaredoxin-3; metal b 30.7 83 0.0028 25.6 5.6 60 104-164 15-96 (111)
14 2wem_A Glutaredoxin-related pr 26.5 1E+02 0.0034 25.5 5.5 48 104-151 19-85 (118)
15 2wul_A Glutaredoxin related pr 25.1 1.1E+02 0.0037 25.7 5.4 60 104-163 19-100 (118)
16 2lqo_A Putative glutaredoxin R 24.9 1.5E+02 0.0053 23.3 6.1 45 104-149 3-62 (92)
17 2hi6_A UPF0107 protein AF0055; 21.7 1.9E+02 0.0066 25.2 6.4 65 101-169 47-123 (141)
No 1
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=99.85 E-value=6.9e-21 Score=179.07 Aligned_cols=125 Identities=18% Similarity=0.237 Sum_probs=100.8
Q ss_pred Eeeeec--C--ccceeEEeeecccCCccccccCCcceEEEeecC---CCCCCCCCCC---C-------CcceEEEEecCC
Q 012531 52 VQTWID--G--IENEEFVGVGARFGTTIVSKEKNANQIHLTLSH---PRDCCSMPKH---K-------YAGDVIMVDRGN 114 (461)
Q Consensus 52 v~~~v~--g--~~~~~~~~~~A~FG~~lp~~~~~~~~~~Lv~~~---p~~aC~~~~~---~-------l~g~IaLV~RG~ 114 (461)
+-+|.| + +....+.+.+|+||..+|..+ .++.++.+. +.+||++.+. . .+||||||+||+
T Consensus 38 n~sy~d~~~~~n~t~~~~~e~a~FG~~~p~~~---v~G~lv~~~~~~~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~RG~ 114 (194)
T 3icu_A 38 NVSWRVPHTGVNRTVWELSEEGVYGQDSPLEP---VAGVLVPPDGPGALNACNPHTNFTVPTVWGSTVQVSWLALIQRGG 114 (194)
T ss_dssp EEEEECCSSCTTCEEEEEEEEEEECTTSCCSC---EEEEEECBSSTTCTTCCSTTCCBCCCBCTTSSCBCCEEEEEESCT
T ss_pred EEEEECCCCCccceeeecccccccCCCCCCCC---cEEEEEecCCCCCcCCCCCCccccCCcccccccCCCeEEEEECCC
Confidence 335654 3 344458899999999998754 677777764 7899998762 1 468999999999
Q ss_pred -CCHHHHHHHHHHcCCcEEEEEecCC------------CccccEEEechhhhHHHHHHHhcCceEEEEEecC--CCCccc
Q 012531 115 -CKFTTKANIAEAAGASALLIINNQK------------DIHIPAVMMPQDAGASLEKMLLNTSSVSVQLYSP--RRPVVD 179 (461)
Q Consensus 115 -CsF~~Ka~~Aq~aGA~avIV~n~~~------------~i~IPvv~Is~~~G~~L~~~l~~g~~V~v~l~~p--~~p~~D 179 (461)
|+|.+|++|||++||+|+||||+++ ..+||+++|++++|+.|++++++|.+|++++... ..||++
T Consensus 115 ~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPsv~Is~~~G~~L~~~L~~G~~Vtvti~vg~~h~pw~~ 194 (194)
T 3icu_A 115 GCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMIGNLKGTKILQSIQRGIQVTMVIEVGKKHGPWVN 194 (194)
T ss_dssp TCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEEEEECHHHHHHHHHHHHTTCCEEEEEEEEEEECCCCC
T ss_pred CcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeEEEECHHHHHHHHHHHHCCCeEEEEEECCCccCCCCC
Confidence 9999999999999999999999741 3579999999999999999999999988887533 345543
No 2
>4hyg_A Putative uncharacterized protein; protease, membrane protein; 3.32A {Methanoculleus marisnigri JR1} PDB: 4hyc_A 4hyd_A
Probab=99.72 E-value=2.6e-18 Score=167.69 Aligned_cols=118 Identities=26% Similarity=0.423 Sum_probs=80.1
Q ss_pred hhhHHHHHHHhhhhhhccccceeecchhHHHHHHHHHHh--cccCchhHHHHHHHHHHhhhheeeeeccccccceeEEEe
Q 012531 314 VTPFCIAFAVVWAIYRKVSFAWIGQDILGIALIITVLQI--VHIPNLKVGTVLLSCAFMYDIFWVFVSKKLFHESVMIVV 391 (461)
Q Consensus 314 ~~~~~~~~~~~w~~~~~~~~~Wil~nilgi~~~i~~l~~--i~l~~~k~~~iLL~~lf~YDIFwVF~sp~~f~~sVMv~V 391 (461)
..+.++++++.++.+. +|+..|+.|+++|..+... +++..+ .+.+||++|++||.+|||. |.+|+++
T Consensus 107 a~~~a~~~~~ll~~yp----eWyvid~~Gi~~~aG~aalFGISl~~~-paiiLL~~LavYDaISVy~------TkHMvtL 175 (301)
T 4hyg_A 107 TLIGAVAVTALLYLYP----EWYVIDILGVLISAGVASIFGISLEPL-PVLVLLVLLAVYDAISVYR------TKHMITL 175 (301)
T ss_dssp HHHHHHHHHHHHHTCC----CSSHHHHHHHHHHHHHHHHHHHSSCHH-HHHHHHHHHHHHHHHHHHH------HHHHHHH
T ss_pred HHHHHHHHHHHHHhcc----cHHHhhHHHHHHHhhHHHHHhhccchH-HHHHHHHHHHHHHhhhccC------chHHHHH
Confidence 3344666666666666 5999999999999987775 556888 7999999999999999995 5589999
Q ss_pred ccCCCCCCCCCCEEEEeccccC-------------CCCceeeccCcchhhHHHHHHHHHHhhcccC
Q 012531 392 ARGDKSGEDGIPMLLKIPRMFD-------------PWGGYSIIGFGDILLPGLIIAFSLRFKLSDL 444 (461)
Q Consensus 392 A~g~~~~~~~~P~~l~~P~~~~-------------~~~~~smLGlGDIviPGl~ia~~lrfD~~~~ 444 (461)
|+|.- +.++|+++++|+-.+ ..++..|+|+||+++|+++++.+.+||....
T Consensus 176 Aegvm--dlk~PilfViP~~~~ys~~~~~~~~~~~~er~a~~iGlGD~viP~ilVvSa~~F~~~~~ 239 (301)
T 4hyg_A 176 AEGVL--ETKAPIMVVVPKRADYSFRKEGLNISEGEERGAFVMGMGDLIMPSILVVSSHVFVDAPA 239 (301)
T ss_dssp TTTC----------------------------------CHHHHHHHHHHHHHHHHHHHHCC-----
T ss_pred HHhhh--ccCCceEEEEecCCCccccccccccccccccceeEecCcchhHHHHHHHHHHHHccccc
Confidence 99953 257999999998421 1356789999999999999999999996433
No 3
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=99.02 E-value=8.7e-10 Score=115.52 Aligned_cols=129 Identities=16% Similarity=0.142 Sum_probs=92.1
Q ss_pred CCCCC-CeEEEEEeeeecCccce--------eEEeeecccCCccccccCCcceEEEeecCCCCCCCCCC-CCCcceEEEE
Q 012531 41 PGCEN-DFVLVKVQTWIDGIENE--------EFVGVGARFGTTIVSKEKNANQIHLTLSHPRDCCSMPK-HKYAGDVIMV 110 (461)
Q Consensus 41 p~c~~-~f~lvkv~~~v~g~~~~--------~~~~~~A~FG~~lp~~~~~~~~~~Lv~~~p~~aC~~~~-~~l~g~IaLV 110 (461)
.|.++ ..+-+.++.|..|.+.- ++...+..+++..| .++++++++.++..++|.... .+++|||||+
T Consensus 58 ~G~~~v~~q~f~~~~w~~~~~~~~~~~~~~~~~~~~~l~~s~~tp---~~~vta~lV~v~~~~~~~~~~~~dvkGKIVlv 134 (444)
T 3iib_A 58 LGFDRVYKEPVTVPVWRRGIAKASILSPFPQPLVVTALGGSIATP---AQGLSATIVRFDTLQDLQNAEAGSLNDKIAFI 134 (444)
T ss_dssp TTCSEEEEEEEEEEEEEEEEEEEEEEESSCEEECEEECBTCCCCC---TTCEEEEEEEESSHHHHHTSCTTTTTTCEEEE
T ss_pred cCCCceEeeeEEeccEEecceEEEEeCCCCceEEEEeccCCCCCC---CCCeEEEEEecCCHHHHhhccccccCccEEEE
Confidence 34432 33555667787554432 23333333443333 456889999987666676543 5899999999
Q ss_pred ecCCCC---------HHHH----HHHHHHcCCcEEEEEecCC----------------CccccEEEechhhhHHHHHHHh
Q 012531 111 DRGNCK---------FTTK----ANIAEAAGASALLIINNQK----------------DIHIPAVMMPQDAGASLEKMLL 161 (461)
Q Consensus 111 ~RG~Cs---------F~~K----a~~Aq~aGA~avIV~n~~~----------------~i~IPvv~Is~~~G~~L~~~l~ 161 (461)
+||.|. |..| +.+|+++||+|+|++|+.. ...||++.|++++|+.|++.++
T Consensus 135 ~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~~~~~~~tg~~~~~~~~~~IP~~~Is~~da~~L~~~l~ 214 (444)
T 3iib_A 135 DAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTDHDRMAHTGMMRYEEGVTAIPAAAISNPDADLINAMLK 214 (444)
T ss_dssp CCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSCCSSCCCCCBCCCCTTSCCCCEEEECHHHHHHHHHHHT
T ss_pred eCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCcccccccCCccccCCCCCCCCeEEecHHHHHHHHHHHh
Confidence 999996 6666 4679999999999999632 2479999999999999999999
Q ss_pred cCceEEEEEec
Q 012531 162 NTSSVSVQLYS 172 (461)
Q Consensus 162 ~g~~V~v~l~~ 172 (461)
+|+++++++..
T Consensus 215 ~g~~~~v~l~~ 225 (444)
T 3iib_A 215 RDKEVVISLEL 225 (444)
T ss_dssp TTCCCEEEEEE
T ss_pred CCCCeEEEEEE
Confidence 88776666653
No 4
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=98.85 E-value=1.5e-08 Score=105.09 Aligned_cols=78 Identities=24% Similarity=0.336 Sum_probs=64.3
Q ss_pred cceEEEeecCCCCCCCCCCC-CCcceEEEEecCCCCHHHHHHHHHHcCCcEEEEEecCC-----------CccccEEEec
Q 012531 82 ANQIHLTLSHPRDCCSMPKH-KYAGDVIMVDRGNCKFTTKANIAEAAGASALLIINNQK-----------DIHIPAVMMP 149 (461)
Q Consensus 82 ~~~~~Lv~~~p~~aC~~~~~-~l~g~IaLV~RG~CsF~~Ka~~Aq~aGA~avIV~n~~~-----------~i~IPvv~Is 149 (461)
...++++.+... ..+..+. +++|||||++||+|+|.+|+++|+++||+|+||||+.+ ...||++.|+
T Consensus 92 ~v~a~lv~~~~G-~~~D~~~~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is 170 (421)
T 2ek8_A 92 DVTAELVYVGLG-TTADVAGKDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGIT 170 (421)
T ss_dssp EEEEEEEECTTC-CTTTTTTSCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEEC
T ss_pred CcceEEEECCCC-ChhhcCCCCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeC
Confidence 457788765422 2222333 79999999999999999999999999999999999853 3579999999
Q ss_pred hhhhHHHHHHH
Q 012531 150 QDAGASLEKML 160 (461)
Q Consensus 150 ~~~G~~L~~~l 160 (461)
+++++.|.+.+
T Consensus 171 ~~~a~~L~~~l 181 (421)
T 2ek8_A 171 KQEGDALAANL 181 (421)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999999988
No 5
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=98.41 E-value=3.1e-07 Score=100.37 Aligned_cols=78 Identities=21% Similarity=0.196 Sum_probs=63.1
Q ss_pred cceEEEeecCCCCCCCC-CC---CCCcceEEEEecCCCCHHHHHHHHHHcCCcEEEEEecCC------------------
Q 012531 82 ANQIHLTLSHPRDCCSM-PK---HKYAGDVIMVDRGNCKFTTKANIAEAAGASALLIINNQK------------------ 139 (461)
Q Consensus 82 ~~~~~Lv~~~p~~aC~~-~~---~~l~g~IaLV~RG~CsF~~Ka~~Aq~aGA~avIV~n~~~------------------ 139 (461)
...+++|.+. .||.. .+ .+++|||||++||+|+|.+|+++|+++||+|+||||+..
T Consensus 107 ~v~g~lV~vg--~G~~~D~~~l~vdv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~ 184 (640)
T 3kas_A 107 TVTGKLVHAN--FGTKKDFEDLYTPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLG 184 (640)
T ss_dssp EEEECEEECT--TCCHHHHHTCSSCCTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSS
T ss_pred ceEEEEEEec--CCChhhHHHhhcccCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccccccC
Confidence 3567788764 44521 11 278999999999999999999999999999999999642
Q ss_pred ------------------------CccccEEEechhhhHHHHHHHh
Q 012531 140 ------------------------DIHIPAVMMPQDAGASLEKMLL 161 (461)
Q Consensus 140 ------------------------~i~IPvv~Is~~~G~~L~~~l~ 161 (461)
...||++-|++++|+.|.+.+.
T Consensus 185 ~Gdp~tpg~ps~~~~~~~~~~~~~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 185 TGDPYTPGFPSFNHTQFPPSRSSGLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp SSCSCCCSSCC---CCCCCCSSCCCCSSCEEECCHHHHHHHHTTEE
T ss_pred CCCCCCCCcccccccccccccccCCCCCCEEecCHHHHHHHHHHcc
Confidence 0259999999999999988764
No 6
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=98.40 E-value=2.9e-07 Score=101.63 Aligned_cols=79 Identities=15% Similarity=0.119 Sum_probs=64.7
Q ss_pred CcceEEEeecCCCCCCCC-C-------CCCCcceEEEEecCCCCHHHHHHHHHHcCCcEEEEEecCC-------------
Q 012531 81 NANQIHLTLSHPRDCCSM-P-------KHKYAGDVIMVDRGNCKFTTKANIAEAAGASALLIINNQK------------- 139 (461)
Q Consensus 81 ~~~~~~Lv~~~p~~aC~~-~-------~~~l~g~IaLV~RG~CsF~~Ka~~Aq~aGA~avIV~n~~~------------- 139 (461)
+..++++|.++ .||.. . ..+++|||||++||+|+|.+|+++||++||+|+||||+..
T Consensus 125 G~v~g~lV~v~--~G~~~Df~~L~~~~~~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~~yP~~ 202 (707)
T 3fed_A 125 GMPEGDLVYVN--YARTEDFFKLEREMGINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPKG 202 (707)
T ss_dssp BCCEECEEECT--TCCHHHHHHHHHTSCCCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCCBTTTS
T ss_pred CceEEEEEEec--CCchhhHHHHHhccCCCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcCchhccccccccCCCC
Confidence 34677888874 45621 1 2368999999999999999999999999999999998610
Q ss_pred -------------------------------------------CccccEEEechhhhHHHHHHHh
Q 012531 140 -------------------------------------------DIHIPAVMMPQDAGASLEKMLL 161 (461)
Q Consensus 140 -------------------------------------------~i~IPvv~Is~~~G~~L~~~l~ 161 (461)
...||++-|++++|+.|.+.+.
T Consensus 203 ~~~p~~~vqrGsv~~~~~~GDp~TPG~ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~ 267 (707)
T 3fed_A 203 WNLPGTAAQRGNVLNLNGAGDPLTPGYPAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLG 267 (707)
T ss_dssp SBCCTTCCCCCCCCCCTTCCSTTCTTSCCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBC
T ss_pred ccCCCccccccceecccCCCCCCCCCCcccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhc
Confidence 0369999999999999999875
No 7
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=98.36 E-value=6e-07 Score=98.37 Aligned_cols=89 Identities=12% Similarity=0.181 Sum_probs=76.1
Q ss_pred ceEEEeecCCCCCCCCCC---C--CCcceEEEEecCCCCHHHHHHHHHHcCCcEEEEEecCC-----CccccEEEechhh
Q 012531 83 NQIHLTLSHPRDCCSMPK---H--KYAGDVIMVDRGNCKFTTKANIAEAAGASALLIINNQK-----DIHIPAVMMPQDA 152 (461)
Q Consensus 83 ~~~~Lv~~~p~~aC~~~~---~--~l~g~IaLV~RG~CsF~~Ka~~Aq~aGA~avIV~n~~~-----~i~IPvv~Is~~~ 152 (461)
...+++.....+.|.+.. . +++|||+|++||.|++.+|..+++++||.++|++|+.. ...+|+++|++++
T Consensus 257 ~~~plv~~~~~~~C~~~~l~~~~vdl~GkIvlc~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~P~~~v~~~~ 336 (649)
T 3i6s_A 257 RDSPVIYNKTLSDCSSEELLSQVENPENTIVICDDNGDFSDQMRIITRARLKAAIFISEDPGVFRSATFPNPGVVVNKKE 336 (649)
T ss_dssp EEEEEECCTTTTTCCCHHHHTTSSSGGGCEEEECCCSCHHHHHHHHHHHTCSEEEEECCCGGGGGCCCCCSCEEEECHHH
T ss_pred cceeeEecccccccccccccccccccCCcEEEEeCCCccHHHHHHHHHhcCceEEEEecCccccccccCcCCEEEEcHHH
Confidence 456888877778998753 3 34999999999999999999999999999999999875 5689999999999
Q ss_pred hHHHHHHHhcCceEEEEEe
Q 012531 153 GASLEKMLLNTSSVSVQLY 171 (461)
Q Consensus 153 G~~L~~~l~~g~~V~v~l~ 171 (461)
|+.|++++++++..++++.
T Consensus 337 g~~i~~yi~s~~~~~a~i~ 355 (649)
T 3i6s_A 337 GKQVINYVKNSVTPTATIT 355 (649)
T ss_dssp HHHHHHHHHTCSSCEEEEE
T ss_pred HHHHHHHHhcCCCceEEEe
Confidence 9999999998776555543
No 8
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=98.04 E-value=1.6e-05 Score=90.30 Aligned_cols=82 Identities=21% Similarity=0.385 Sum_probs=67.1
Q ss_pred eEEEeecCCCCCCCCCC-CCCcceEEEEecCCCCHHHHHHHHHHcCCcEEEEEecCC---------CccccEEEechhhh
Q 012531 84 QIHLTLSHPRDCCSMPK-HKYAGDVIMVDRGNCKFTTKANIAEAAGASALLIINNQK---------DIHIPAVMMPQDAG 153 (461)
Q Consensus 84 ~~~Lv~~~p~~aC~~~~-~~l~g~IaLV~RG~CsF~~Ka~~Aq~aGA~avIV~n~~~---------~i~IPvv~Is~~~G 153 (461)
..+++.+. ++|.+.. .+++|||+|++||.|+|.+|+.+++++||.++|++|+.. ...+|+++|++++|
T Consensus 261 ~~~lv~~~--~g~~~~~~~~v~Gkivl~~rg~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g 338 (926)
T 1xf1_A 261 AYDYAYAN--RGTKEDDFKDVKGKIALIERGDIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDG 338 (926)
T ss_dssp CEEEEECT--TSCSTTTTTTCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSTTCCCEECCCSTTCCEEEECHHHH
T ss_pred eEEEEECC--CCCCccchhhcCCeEEEEECCCCCHHHHHHHHHhCCCcEEEEEecCCCCcccccCccccccEEEEeHHHH
Confidence 45676653 5786543 579999999999999999999999999999999999864 45799999999999
Q ss_pred HHHHHHHhcCceEEEEEe
Q 012531 154 ASLEKMLLNTSSVSVQLY 171 (461)
Q Consensus 154 ~~L~~~l~~g~~V~v~l~ 171 (461)
+.|+. +...++++.
T Consensus 339 ~~l~~----~~~~ti~~~ 352 (926)
T 1xf1_A 339 LLLKD----NPQKTITFN 352 (926)
T ss_dssp HHHHH----CSSCEEEEC
T ss_pred HHHHh----CCceEEEec
Confidence 98874 455666654
No 9
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=97.92 E-value=2e-05 Score=82.05 Aligned_cols=75 Identities=23% Similarity=0.391 Sum_probs=62.6
Q ss_pred CCCCCCC-----CCCcceEEEEecCCC-----CHHHHHHHHHHcCCcEEEEEecCC--------------CccccEEEec
Q 012531 94 DCCSMPK-----HKYAGDVIMVDRGNC-----KFTTKANIAEAAGASALLIINNQK--------------DIHIPAVMMP 149 (461)
Q Consensus 94 ~aC~~~~-----~~l~g~IaLV~RG~C-----sF~~Ka~~Aq~aGA~avIV~n~~~--------------~i~IPvv~Is 149 (461)
++|.+.+ .+++|||+|++||+| .+.+|+++++++||+++|+||+.+ ...||+++++
T Consensus 258 ~~C~~~~~~~~~~~~~gkivl~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~ 337 (441)
T 1y9z_A 258 AECTVNGTSFSCGNMANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVD 337 (441)
T ss_dssp EEEEEETTEEECCCCTTEEEEEECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEEC
T ss_pred hccccccccccCCCccccEEEEeccccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEe
Confidence 4687542 478999999999987 899999999999999999998753 4579999999
Q ss_pred hhhhHHHHHHHhcCceEEEEE
Q 012531 150 QDAGASLEKMLLNTSSVSVQL 170 (461)
Q Consensus 150 ~~~G~~L~~~l~~g~~V~v~l 170 (461)
+++|+.|++++ +..++++.
T Consensus 338 ~~~g~~l~~~~--~~~~t~~~ 356 (441)
T 1y9z_A 338 RATGLALKAKL--GQSTTVSN 356 (441)
T ss_dssp HHHHHHHHTTT--TSEEEEEE
T ss_pred HHHHHHHHHHh--cCCccccc
Confidence 99999999887 44555543
No 10
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=92.91 E-value=0.11 Score=56.33 Aligned_cols=69 Identities=13% Similarity=0.322 Sum_probs=56.2
Q ss_pred CCCCCCC---CCCcceEEEEecCCCCHHHHHHHHHHcCCcEEEEEecCC----CccccEEEechhhhHHHHHHHhcCce
Q 012531 94 DCCSMPK---HKYAGDVIMVDRGNCKFTTKANIAEAAGASALLIINNQK----DIHIPAVMMPQDAGASLEKMLLNTSS 165 (461)
Q Consensus 94 ~aC~~~~---~~l~g~IaLV~RG~CsF~~Ka~~Aq~aGA~avIV~n~~~----~i~IPvv~Is~~~G~~L~~~l~~g~~ 165 (461)
..|.+.. ...+|||++++| .+..|..+++.+||.+++++|+.. ...+|.+.++.++|..+++.+.....
T Consensus 268 ~~~~~~~~~~~~v~gkivl~~~---~~~~~~~~~~~~Ga~gvi~~~~~~~~~~~~~lP~~~v~~~~g~~i~~~~~~~~~ 343 (621)
T 3vta_A 268 RFCTDKSVNPNLLKGKIVVCEA---SFGPHEFFKSLDGAAGVLMTSNTRDYADSYPLPSSVLDPNDLLATLRYIYSIRS 343 (621)
T ss_dssp TTTCTTCSCGGGTTTSEEECSS---CCCHHHHHHHHTTCSEEEEECSCCSSCCCCSSSEEEECHHHHHHHHHHHHHHSS
T ss_pred ccccccccccccccceEEEEec---CCChhHHhhhhcceeEEEEEecCCCcccccccceEEECHHHHHHHHHHHhccCC
Confidence 3565544 368999999875 466899999999999999999876 56899999999999999998775443
No 11
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=38.37 E-value=63 Score=26.76 Aligned_cols=27 Identities=19% Similarity=0.402 Sum_probs=21.7
Q ss_pred cceEEEEecC-----CCCHHHHHHHHHH-cCCc
Q 012531 104 AGDVIMVDRG-----NCKFTTKANIAEA-AGAS 130 (461)
Q Consensus 104 ~g~IaLV~RG-----~CsF~~Ka~~Aq~-aGA~ 130 (461)
+++|++..++ .|.|..|++..-+ .|..
T Consensus 15 ~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~ 47 (121)
T 3gx8_A 15 SAPVVLFMKGTPEFPKCGFSRATIGLLGNQGVD 47 (121)
T ss_dssp SCSEEEEESBCSSSBCTTHHHHHHHHHHHHTBC
T ss_pred cCCEEEEEeccCCCCCCccHHHHHHHHHHcCCC
Confidence 4689999998 8999999998744 5654
No 12
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=34.15 E-value=59 Score=26.22 Aligned_cols=59 Identities=10% Similarity=0.104 Sum_probs=37.7
Q ss_pred cceEEEEecC-----CCCHHHHHHHHHH-cCCcEEEEEecC-C------------CccccEEEechhh---hHHHHHHHh
Q 012531 104 AGDVIMVDRG-----NCKFTTKANIAEA-AGASALLIINNQ-K------------DIHIPAVMMPQDA---GASLEKMLL 161 (461)
Q Consensus 104 ~g~IaLV~RG-----~CsF~~Ka~~Aq~-aGA~avIV~n~~-~------------~i~IPvv~Is~~~---G~~L~~~l~ 161 (461)
+++|++..++ .|.|..|++..-+ .|.. .-.+|-. + ..++|.++|...- .+.+.++.+
T Consensus 17 ~~~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~gi~-~~~~dI~~~~~~~~~l~~~~g~~tvP~ifi~g~~iGG~d~l~~l~~ 95 (109)
T 3ipz_A 17 SEKVVLFMKGTRDFPMCGFSNTVVQILKNLNVP-FEDVNILENEMLRQGLKEYSNWPTFPQLYIGGEFFGGCDITLEAFK 95 (109)
T ss_dssp SSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCC-CEEEEGGGCHHHHHHHHHHHTCSSSCEEEETTEEEECHHHHHHHHH
T ss_pred cCCEEEEEecCCCCCCChhHHHHHHHHHHcCCC-cEEEECCCCHHHHHHHHHHHCCCCCCeEEECCEEEeCHHHHHHHHH
Confidence 4689999998 8999999998754 4654 3334421 1 3578888887652 233444444
Q ss_pred cC
Q 012531 162 NT 163 (461)
Q Consensus 162 ~g 163 (461)
+|
T Consensus 96 ~G 97 (109)
T 3ipz_A 96 TG 97 (109)
T ss_dssp HS
T ss_pred cC
Confidence 44
No 13
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=30.65 E-value=83 Score=25.55 Aligned_cols=60 Identities=7% Similarity=0.075 Sum_probs=40.3
Q ss_pred cceEEEEec-----CCCCHHHHHHHHHH-cCCcEEEEEecC-C------------CccccEEEechhh---hHHHHHHHh
Q 012531 104 AGDVIMVDR-----GNCKFTTKANIAEA-AGASALLIINNQ-K------------DIHIPAVMMPQDA---GASLEKMLL 161 (461)
Q Consensus 104 ~g~IaLV~R-----G~CsF~~Ka~~Aq~-aGA~avIV~n~~-~------------~i~IPvv~Is~~~---G~~L~~~l~ 161 (461)
+++|++-.+ -+|.|..|++..-+ .|.. .-.+|-. + ..++|.++|...- .+.+.+..+
T Consensus 15 ~~~Vvlf~kg~~~~~~Cp~C~~ak~~L~~~gi~-y~~~di~~d~~~~~~l~~~~g~~tvP~ifi~g~~iGG~d~l~~l~~ 93 (111)
T 3zyw_A 15 AAPCMLFMKGTPQEPRCGFSKQMVEILHKHNIQ-FSSFDIFSDEEVRQGLKAYSSWPTYPQLYVSGELIGGLDIIKELEA 93 (111)
T ss_dssp SSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCC-CEEEEGGGCHHHHHHHHHHHTCCSSCEEEETTEEEECHHHHHHHHH
T ss_pred cCCEEEEEecCCCCCcchhHHHHHHHHHHcCCC-eEEEECcCCHHHHHHHHHHHCCCCCCEEEECCEEEecHHHHHHHHH
Confidence 468999998 78999999998755 5654 3344422 1 4578999887652 245666666
Q ss_pred cCc
Q 012531 162 NTS 164 (461)
Q Consensus 162 ~g~ 164 (461)
+|+
T Consensus 94 ~G~ 96 (111)
T 3zyw_A 94 SEE 96 (111)
T ss_dssp TTC
T ss_pred CCC
Confidence 554
No 14
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=26.54 E-value=1e+02 Score=25.54 Aligned_cols=48 Identities=19% Similarity=0.269 Sum_probs=33.0
Q ss_pred cceEEEEecC-----CCCHHHHHHHHHH-cCCcEEEEEecC-C------------CccccEEEechh
Q 012531 104 AGDVIMVDRG-----NCKFTTKANIAEA-AGASALLIINNQ-K------------DIHIPAVMMPQD 151 (461)
Q Consensus 104 ~g~IaLV~RG-----~CsF~~Ka~~Aq~-aGA~avIV~n~~-~------------~i~IPvv~Is~~ 151 (461)
+++|++-.++ .|.|..|++..-+ .|....-.+|-. + ..++|.++|...
T Consensus 19 ~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~~~~vdV~~d~~~~~~l~~~tg~~tvP~vfI~g~ 85 (118)
T 2wem_A 19 KDKVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDYAAYNVLDDPELRQGIKDYSNWPTIPQVYLNGE 85 (118)
T ss_dssp HSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCCEEEESSSCHHHHHHHHHHHTCCSSCEEEETTE
T ss_pred cCCEEEEEecCCCCCccHHHHHHHHHHHHcCCCCCEEEEcCCCHHHHHHHHHHhCCCCcCeEEECCE
Confidence 4689999998 8999999998754 565312333321 1 457888888765
No 15
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=25.09 E-value=1.1e+02 Score=25.67 Aligned_cols=60 Identities=20% Similarity=0.210 Sum_probs=37.9
Q ss_pred cceEEEEecCC-----CCHHHHHHHHH-HcCCcEEEEEecCC-------------CccccEEEechhh---hHHHHHHHh
Q 012531 104 AGDVIMVDRGN-----CKFTTKANIAE-AAGASALLIINNQK-------------DIHIPAVMMPQDA---GASLEKMLL 161 (461)
Q Consensus 104 ~g~IaLV~RG~-----CsF~~Ka~~Aq-~aGA~avIV~n~~~-------------~i~IPvv~Is~~~---G~~L~~~l~ 161 (461)
+++|++-..|. |.|..|++..- +.|..-.-.+|-.+ .-++|-++|...- .+.+.+..+
T Consensus 19 ~~~VvvF~Kgt~~~P~C~fc~~ak~lL~~~gv~~~~~~~v~~~~~~r~~l~~~sg~~TvPqIFI~g~~IGG~Ddl~~l~~ 98 (118)
T 2wul_A 19 KDKVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDYAAYNVLDDPELRQGIKDYSNWPTIPQVYLNGEFVGGCDILLQMHQ 98 (118)
T ss_dssp HSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCSCEEEETTSCHHHHHHHHHHHTCCSSCEEEETTEEEECHHHHHHHHH
T ss_pred cCCEEEEEcCCCCCCCCHHHHHHHHHHHHhCCcCeEeecccCCHHHHHHHHHhccCCCCCeEeECCEEECCHHHHHHHHH
Confidence 47899999885 99999999764 46763222233222 4578888888662 233444444
Q ss_pred cC
Q 012531 162 NT 163 (461)
Q Consensus 162 ~g 163 (461)
+|
T Consensus 99 ~G 100 (118)
T 2wul_A 99 NG 100 (118)
T ss_dssp HT
T ss_pred CC
Confidence 44
No 16
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=24.89 E-value=1.5e+02 Score=23.27 Aligned_cols=45 Identities=9% Similarity=0.189 Sum_probs=31.0
Q ss_pred cceEEEEecCCCCHHHHHHHHHH-cCCcEEEEEecCC--------------CccccEEEec
Q 012531 104 AGDVIMVDRGNCKFTTKANIAEA-AGASALLIINNQK--------------DIHIPAVMMP 149 (461)
Q Consensus 104 ~g~IaLV~RG~CsF~~Ka~~Aq~-aGA~avIV~n~~~--------------~i~IPvv~Is 149 (461)
+.+|.+-.+-.|.|-.|++..-+ .|... -.+|-+. .-++|+++|.
T Consensus 3 ta~I~vYs~~~Cp~C~~aK~~L~~~gi~y-~~idi~~d~~~~~~~~~~~~G~~tVP~I~i~ 62 (92)
T 2lqo_A 3 TAALTIYTTSWCGYCLRLKTALTANRIAY-DEVDIEHNRAAAEFVGSVNGGNRTVPTVKFA 62 (92)
T ss_dssp SSCEEEEECTTCSSHHHHHHHHHHTTCCC-EEEETTTCHHHHHHHHHHSSSSSCSCEEEET
T ss_pred CCcEEEEcCCCCHhHHHHHHHHHhcCCce-EEEEcCCCHHHHHHHHHHcCCCCEeCEEEEe
Confidence 46788999999999999998755 45443 3344322 2367888774
No 17
>2hi6_A UPF0107 protein AF0055; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Archaeoglobus fulgidus} SCOP: c.8.2.3
Probab=21.71 E-value=1.9e+02 Score=25.19 Aligned_cols=65 Identities=15% Similarity=0.153 Sum_probs=37.8
Q ss_pred CCCcceEEEEe--cCCCCHHHHHHHH-HHcCCcEEEEEecCC--------CccccEE-EechhhhHHHHHHHhcCceEEE
Q 012531 101 HKYAGDVIMVD--RGNCKFTTKANIA-EAAGASALLIINNQK--------DIHIPAV-MMPQDAGASLEKMLLNTSSVSV 168 (461)
Q Consensus 101 ~~l~g~IaLV~--RG~CsF~~Ka~~A-q~aGA~avIV~n~~~--------~i~IPvv-~Is~~~G~~L~~~l~~g~~V~v 168 (461)
.+++|||.+.. ||.|+=.-=...+ .+.-|-+.||....+ --.||++ -+.. ...+.+++|..|++
T Consensus 47 ~siagkILv~P~gkGSt~gS~vl~~l~~~g~aPaAiI~~~~e~Il~~Gaiva~IP~vd~~~~----d~~~~i~~G~~v~v 122 (141)
T 2hi6_A 47 ESVAGRILVFPGGKGSTVGSYVLLNLRKNGVAPKAIINKKTETIIAVGAAMAEIPLVEVRDE----KFFEAVKTGDRVVV 122 (141)
T ss_dssp CBCTTSEEEESCCSCCSSCTTHHHHHHHHTCSCSEEEESSCCHHHHHHHHHHTCCEEECCCT----HHHHHCCTTSEEEE
T ss_pred CcccCeEEEecCCCCccHHHHHHHHHHHCCCCCeEEEecCcchhhhhhhheeCCceEeccCh----hHHHHhcCCCEEEE
Confidence 36899998886 8888533222222 223343555555555 1248987 3332 23456777888877
Q ss_pred E
Q 012531 169 Q 169 (461)
Q Consensus 169 ~ 169 (461)
.
T Consensus 123 d 123 (141)
T 2hi6_A 123 N 123 (141)
T ss_dssp E
T ss_pred e
Confidence 5
Done!