Query 012532
Match_columns 461
No_of_seqs 231 out of 1434
Neff 4.1
Searched_HMMs 29240
Date Mon Mar 25 11:16:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012532.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012532hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gq2_A Malic enzyme; oxidoredu 100.0 2E-141 7E-146 1115.6 30.6 357 102-460 1-357 (555)
2 1pj3_A NAD-dependent malic enz 100.0 3E-141 1E-145 1116.8 29.4 358 102-460 3-362 (564)
3 1o0s_A NAD-ME, NAD-dependent m 100.0 1E-140 5E-145 1115.9 27.6 361 98-460 33-395 (605)
4 3nv9_A Malic enzyme; rossmann 100.0 3E-72 1E-76 582.5 16.6 228 183-461 57-294 (487)
5 2a9f_A Putative malic enzyme ( 100.0 8.5E-67 2.9E-71 534.3 12.8 228 173-460 23-257 (398)
6 1vl6_A Malate oxidoreductase; 100.0 2.9E-64 9.8E-69 514.5 12.7 229 173-461 27-263 (388)
7 2dvm_A Malic enzyme, 439AA lon 100.0 9.8E-48 3.4E-52 397.9 14.3 226 175-460 23-262 (439)
8 3gvp_A Adenosylhomocysteinase 97.5 0.00029 1E-08 73.4 10.6 105 304-428 111-253 (435)
9 3h9u_A Adenosylhomocysteinase; 97.2 0.00051 1.7E-08 71.6 7.8 52 350-404 171-232 (436)
10 1x13_A NAD(P) transhydrogenase 96.6 0.0045 1.6E-07 63.0 8.3 153 218-429 26-206 (401)
11 3ond_A Adenosylhomocysteinase; 96.0 0.009 3.1E-07 63.1 7.1 64 350-428 225-298 (488)
12 3k92_A NAD-GDH, NAD-specific g 95.0 0.2 7E-06 52.1 12.5 120 304-434 125-261 (424)
13 3aoe_E Glutamate dehydrogenase 93.9 0.35 1.2E-05 50.2 11.5 118 305-434 123-258 (419)
14 4fcc_A Glutamate dehydrogenase 93.7 0.81 2.8E-05 48.0 13.8 120 304-434 140-275 (450)
15 2yfq_A Padgh, NAD-GDH, NAD-spe 93.7 0.38 1.3E-05 49.8 11.3 118 305-434 116-257 (421)
16 3r3j_A Glutamate dehydrogenase 93.6 0.67 2.3E-05 48.7 13.0 119 305-434 145-279 (456)
17 3aog_A Glutamate dehydrogenase 93.4 0.77 2.7E-05 47.9 13.0 117 305-434 140-275 (440)
18 3jyo_A Quinate/shikimate dehyd 93.2 0.15 5.3E-06 49.5 7.0 50 367-427 111-160 (283)
19 3fbt_A Chorismate mutase and s 93.2 0.14 4.6E-06 50.2 6.6 37 368-404 107-143 (282)
20 3o8q_A Shikimate 5-dehydrogena 93.1 0.14 4.9E-06 49.8 6.5 49 367-426 110-158 (281)
21 3tnl_A Shikimate dehydrogenase 93.1 0.16 5.5E-06 50.4 7.0 50 367-427 138-187 (315)
22 3t4e_A Quinate/shikimate dehyd 93.0 0.16 5.4E-06 50.4 6.8 49 368-427 133-181 (312)
23 3don_A Shikimate dehydrogenase 92.9 0.1 3.4E-06 50.9 5.1 57 352-427 94-150 (277)
24 3pwz_A Shikimate dehydrogenase 92.7 0.15 5.2E-06 49.4 6.1 49 367-426 103-152 (272)
25 2egg_A AROE, shikimate 5-dehyd 92.6 0.16 5.6E-06 49.3 6.2 49 368-427 125-174 (297)
26 3tum_A Shikimate dehydrogenase 92.1 0.25 8.7E-06 47.9 6.8 48 368-426 110-157 (269)
27 1v9l_A Glutamate dehydrogenase 92.1 1.1 3.8E-05 46.5 12.0 117 305-434 115-250 (421)
28 2tmg_A Protein (glutamate dehy 91.7 1.6 5.5E-05 45.2 12.6 119 305-434 114-250 (415)
29 1p77_A Shikimate 5-dehydrogena 91.7 0.22 7.4E-06 47.5 5.8 38 367-404 103-140 (272)
30 3n58_A Adenosylhomocysteinase; 91.7 0.29 9.8E-06 51.6 7.1 52 350-404 207-268 (464)
31 3d4o_A Dipicolinate synthase s 91.5 0.45 1.5E-05 45.6 7.8 65 351-427 117-187 (293)
32 1nyt_A Shikimate 5-dehydrogena 91.4 0.36 1.2E-05 45.8 6.9 38 367-404 103-140 (271)
33 2hk9_A Shikimate dehydrogenase 91.2 0.38 1.3E-05 45.8 6.9 48 368-427 114-161 (275)
34 2d5c_A AROE, shikimate 5-dehyd 91.1 0.32 1.1E-05 45.6 6.2 47 368-427 102-148 (263)
35 3kkj_A Amine oxidase, flavin-c 90.4 0.26 9E-06 41.3 4.4 31 385-427 4-34 (336)
36 1gtm_A Glutamate dehydrogenase 90.3 2.4 8.3E-05 43.6 12.4 114 305-430 114-249 (419)
37 1lu9_A Methylene tetrahydromet 90.1 1.6 5.6E-05 41.3 10.2 81 333-427 64-152 (287)
38 1bgv_A Glutamate dehydrogenase 90.0 2.5 8.5E-05 44.3 12.2 118 306-434 136-270 (449)
39 2bma_A Glutamate dehydrogenase 90.0 1.4 4.7E-05 46.5 10.3 117 306-434 159-292 (470)
40 1nvt_A Shikimate 5'-dehydrogen 88.7 0.39 1.3E-05 45.9 4.8 38 366-403 111-148 (287)
41 1hyu_A AHPF, alkyl hydroperoxi 87.5 0.57 2E-05 48.4 5.4 99 314-427 135-244 (521)
42 3u62_A Shikimate dehydrogenase 87.1 0.55 1.9E-05 44.9 4.7 90 314-427 42-141 (253)
43 1npy_A Hypothetical shikimate 86.4 1.1 3.7E-05 43.3 6.3 36 368-404 105-140 (271)
44 3h8v_A Ubiquitin-like modifier 86.3 0.68 2.3E-05 45.6 4.9 39 379-428 32-70 (292)
45 3rui_A Ubiquitin-like modifier 85.3 0.55 1.9E-05 47.4 3.8 38 380-428 31-68 (340)
46 1jw9_B Molybdopterin biosynthe 83.3 0.8 2.7E-05 43.2 3.8 38 380-428 28-65 (249)
47 1zud_1 Adenylyltransferase THI 82.8 0.78 2.7E-05 43.5 3.4 38 380-428 25-62 (251)
48 1c1d_A L-phenylalanine dehydro 82.3 19 0.00063 36.4 13.5 106 307-427 92-207 (355)
49 3vrd_B FCCB subunit, flavocyto 81.8 1.6 5.5E-05 42.4 5.4 35 383-427 2-36 (401)
50 3h5n_A MCCB protein; ubiquitin 81.3 0.99 3.4E-05 45.1 3.7 39 379-428 114-152 (353)
51 1l7d_A Nicotinamide nucleotide 80.9 2.1 7.1E-05 42.8 5.9 162 219-428 20-205 (384)
52 2o4c_A Erythronate-4-phosphate 80.6 3 0.0001 42.5 7.0 54 351-404 81-137 (380)
53 1leh_A Leucine dehydrogenase; 80.0 4.2 0.00014 41.1 7.9 90 311-404 93-194 (364)
54 3phh_A Shikimate dehydrogenase 79.9 1.5 5.1E-05 42.6 4.4 43 369-427 108-150 (269)
55 1y8q_A Ubiquitin-like 1 activa 79.5 1.5 5.1E-05 43.7 4.3 37 380-427 33-69 (346)
56 3oet_A Erythronate-4-phosphate 79.5 3 0.0001 42.6 6.6 64 351-426 84-150 (381)
57 3mw9_A GDH 1, glutamate dehydr 79.3 21 0.00071 38.0 13.1 120 304-434 135-284 (501)
58 4gsl_A Ubiquitin-like modifier 78.8 1.3 4.3E-05 48.2 3.8 38 380-428 323-360 (615)
59 4hb9_A Similarities with proba 78.7 1.8 6.1E-05 41.2 4.4 32 384-427 2-33 (412)
60 3vh1_A Ubiquitin-like modifier 78.6 1.1 3.8E-05 48.5 3.3 38 379-427 323-360 (598)
61 1gpj_A Glutamyl-tRNA reductase 78.3 3.7 0.00013 41.3 6.9 37 380-427 164-200 (404)
62 3p2o_A Bifunctional protein fo 78.3 3.6 0.00012 40.7 6.6 54 362-427 139-193 (285)
63 3l07_A Bifunctional protein fo 78.2 3.6 0.00012 40.7 6.6 53 363-427 141-194 (285)
64 4a26_A Putative C-1-tetrahydro 77.9 3.8 0.00013 40.8 6.7 44 361-404 143-187 (300)
65 2dbq_A Glyoxylate reductase; D 77.4 5.3 0.00018 39.3 7.5 38 378-427 145-182 (334)
66 4a9w_A Monooxygenase; baeyer-v 77.2 1.7 5.8E-05 40.4 3.7 34 383-428 3-36 (357)
67 3oj0_A Glutr, glutamyl-tRNA re 76.6 0.98 3.3E-05 38.2 1.8 37 362-403 5-41 (144)
68 3fbs_A Oxidoreductase; structu 76.1 2.4 8.3E-05 38.4 4.4 32 384-427 3-34 (297)
69 3d1c_A Flavin-containing putat 76.1 2.4 8.1E-05 40.1 4.4 35 383-428 4-38 (369)
70 3alj_A 2-methyl-3-hydroxypyrid 75.7 2.6 8.8E-05 40.7 4.7 39 380-430 8-46 (379)
71 2g1u_A Hypothetical protein TM 75.7 3.3 0.00011 35.4 4.8 37 379-427 15-51 (155)
72 4a5o_A Bifunctional protein fo 75.6 4.5 0.00015 40.0 6.4 42 363-404 141-183 (286)
73 3oz2_A Digeranylgeranylglycero 75.3 2.4 8.3E-05 39.8 4.3 31 385-427 6-36 (397)
74 1a4i_A Methylenetetrahydrofola 75.1 4.4 0.00015 40.4 6.3 55 361-427 143-198 (301)
75 2gcg_A Glyoxylate reductase/hy 74.9 4.4 0.00015 39.7 6.2 66 350-427 98-187 (330)
76 2hmt_A YUAA protein; RCK, KTN, 74.8 2.5 8.7E-05 34.3 3.8 24 381-404 4-27 (144)
77 3lzw_A Ferredoxin--NADP reduct 74.8 2.8 9.4E-05 38.7 4.5 33 384-428 8-40 (332)
78 3f8d_A Thioredoxin reductase ( 74.7 2.8 9.5E-05 38.4 4.4 33 383-427 15-47 (323)
79 2ekl_A D-3-phosphoglycerate de 74.5 6.7 0.00023 38.3 7.3 65 351-427 91-174 (313)
80 2zbw_A Thioredoxin reductase; 74.4 2.8 9.5E-05 39.1 4.4 34 383-428 5-38 (335)
81 1tt5_B Ubiquitin-activating en 73.2 2 7E-05 44.4 3.4 37 380-427 37-73 (434)
82 2rir_A Dipicolinate synthase, 73.1 5.8 0.0002 37.9 6.4 42 374-427 148-189 (300)
83 1b0a_A Protein (fold bifunctio 72.9 5.2 0.00018 39.6 6.1 55 361-427 137-192 (288)
84 3ba1_A HPPR, hydroxyphenylpyru 72.7 5.2 0.00018 39.7 6.1 55 361-427 123-196 (333)
85 4dio_A NAD(P) transhydrogenase 72.6 4.4 0.00015 41.8 5.7 38 380-429 187-224 (405)
86 3ngx_A Bifunctional protein fo 72.5 5.9 0.0002 39.0 6.4 52 362-427 131-183 (276)
87 3fg2_P Putative rubredoxin red 72.5 3.5 0.00012 40.5 4.8 36 384-429 2-37 (404)
88 1wwk_A Phosphoglycerate dehydr 72.3 6.3 0.00021 38.4 6.5 55 361-427 102-174 (307)
89 3itj_A Thioredoxin reductase 1 71.9 2.5 8.7E-05 39.1 3.5 33 383-427 22-54 (338)
90 2vou_A 2,6-dihydroxypyridine h 71.5 4.2 0.00014 39.6 5.1 36 382-429 4-39 (397)
91 2jae_A L-amino acid oxidase; o 71.0 3.4 0.00012 41.2 4.4 41 376-428 4-44 (489)
92 3dme_A Conserved exported prot 71.0 3.9 0.00013 38.2 4.6 33 383-427 4-36 (369)
93 2d0i_A Dehydrogenase; structur 71.0 6.9 0.00024 38.5 6.5 37 379-427 142-178 (333)
94 2xdo_A TETX2 protein; tetracyc 70.8 3.7 0.00013 40.0 4.5 36 381-428 24-59 (398)
95 3p2y_A Alanine dehydrogenase/p 70.7 7.4 0.00025 39.8 6.9 36 381-428 182-217 (381)
96 1pqw_A Polyketide synthase; ro 70.7 13 0.00045 32.4 7.7 39 366-404 22-61 (198)
97 3h8l_A NADH oxidase; membrane 70.4 3.5 0.00012 40.3 4.2 37 384-429 2-38 (409)
98 2ywl_A Thioredoxin reductase r 70.2 4.4 0.00015 34.6 4.4 35 384-430 2-37 (180)
99 2q7v_A Thioredoxin reductase; 70.1 4 0.00014 38.1 4.4 33 383-427 8-40 (325)
100 1ryi_A Glycine oxidase; flavop 70.1 4.2 0.00014 38.7 4.6 35 383-429 17-51 (382)
101 3ab1_A Ferredoxin--NADP reduct 70.1 4.1 0.00014 38.7 4.6 35 382-428 13-47 (360)
102 2eez_A Alanine dehydrogenase; 70.1 7.9 0.00027 38.3 6.8 35 381-427 164-198 (369)
103 3rp8_A Flavoprotein monooxygen 70.1 4.1 0.00014 39.6 4.6 37 381-429 21-57 (407)
104 1y56_B Sarcosine oxidase; dehy 70.0 4 0.00014 38.9 4.5 34 383-428 5-38 (382)
105 3cgv_A Geranylgeranyl reductas 70.0 4 0.00014 38.9 4.5 36 383-430 4-39 (397)
106 1lss_A TRK system potassium up 69.9 5 0.00017 32.4 4.5 33 383-427 4-36 (140)
107 2x3n_A Probable FAD-dependent 69.7 3.7 0.00013 39.7 4.2 35 383-429 6-40 (399)
108 3hyw_A Sulfide-quinone reducta 69.7 3.6 0.00012 41.0 4.3 35 384-428 3-37 (430)
109 3llv_A Exopolyphosphatase-rela 69.6 4.8 0.00016 33.4 4.4 34 382-427 5-38 (141)
110 1yvv_A Amine oxidase, flavin-c 69.6 4 0.00014 38.0 4.3 33 384-428 3-35 (336)
111 3r9u_A Thioredoxin reductase; 69.6 4.1 0.00014 37.3 4.2 33 383-427 4-37 (315)
112 1pjc_A Protein (L-alanine dehy 68.9 6.5 0.00022 38.8 5.9 35 381-427 165-199 (361)
113 3cty_A Thioredoxin reductase; 68.8 4.5 0.00015 37.7 4.4 33 383-427 16-48 (319)
114 2gf3_A MSOX, monomeric sarcosi 68.7 4.4 0.00015 38.5 4.5 35 384-430 4-38 (389)
115 3nix_A Flavoprotein/dehydrogen 68.6 5.4 0.00018 38.6 5.1 35 383-429 5-39 (421)
116 3axb_A Putative oxidoreductase 68.6 4 0.00014 40.3 4.2 37 379-426 19-55 (448)
117 1xdw_A NAD+-dependent (R)-2-hy 68.5 7.7 0.00026 38.2 6.2 84 331-427 73-178 (331)
118 1y8q_B Anthracycline-, ubiquit 68.3 3.2 0.00011 45.3 3.7 38 380-428 14-51 (640)
119 4e12_A Diketoreductase; oxidor 68.2 4.8 0.00016 38.1 4.5 32 384-427 5-36 (283)
120 3lxd_A FAD-dependent pyridine 68.2 4.3 0.00015 39.9 4.4 38 382-429 8-45 (415)
121 2vdc_G Glutamate synthase [NAD 68.1 5.3 0.00018 40.8 5.1 35 382-428 121-155 (456)
122 2gag_B Heterotetrameric sarcos 68.0 5.1 0.00017 38.3 4.8 36 383-428 21-56 (405)
123 3ado_A Lambda-crystallin; L-gu 67.8 4.6 0.00016 40.1 4.5 33 383-427 6-38 (319)
124 3ic5_A Putative saccharopine d 67.4 5.2 0.00018 31.3 4.0 35 382-427 4-38 (118)
125 3c96_A Flavin-containing monoo 67.4 5 0.00017 39.2 4.6 36 383-429 4-39 (410)
126 1trb_A Thioredoxin reductase; 67.2 2.9 9.9E-05 38.7 2.7 34 382-427 4-37 (320)
127 2uzz_A N-methyl-L-tryptophan o 67.1 4.6 0.00016 38.2 4.2 35 384-430 3-37 (372)
128 3k7m_X 6-hydroxy-L-nicotine ox 67.1 5.2 0.00018 38.9 4.7 32 385-428 3-34 (431)
129 2cuk_A Glycerate dehydrogenase 66.9 11 0.00037 36.8 6.9 66 350-427 87-176 (311)
130 1k0i_A P-hydroxybenzoate hydro 66.7 5.7 0.0002 38.2 4.9 34 384-429 3-36 (394)
131 2dq4_A L-threonine 3-dehydroge 66.7 8.3 0.00028 37.1 6.0 54 360-426 143-197 (343)
132 3uox_A Otemo; baeyer-villiger 66.6 5.4 0.00019 41.6 5.0 36 381-428 7-42 (545)
133 2q0l_A TRXR, thioredoxin reduc 66.4 5.6 0.00019 36.7 4.5 33 384-427 2-34 (311)
134 2xve_A Flavin-containing monoo 66.4 5 0.00017 40.6 4.6 38 384-427 3-40 (464)
135 1vdc_A NTR, NADPH dependent th 66.2 4.3 0.00015 37.8 3.7 33 382-426 7-39 (333)
136 4g2n_A D-isomer specific 2-hyd 65.9 12 0.0004 37.5 7.1 66 351-428 117-206 (345)
137 1zk7_A HGII, reductase, mercur 65.7 5.7 0.00019 39.8 4.8 33 383-427 4-36 (467)
138 1c0p_A D-amino acid oxidase; a 65.6 6.5 0.00022 37.5 4.9 34 383-428 6-39 (363)
139 1f0y_A HCDH, L-3-hydroxyacyl-C 65.5 5.7 0.00019 37.7 4.5 32 384-427 16-47 (302)
140 2oln_A NIKD protein; flavoprot 65.5 5.5 0.00019 38.4 4.4 35 384-430 5-39 (397)
141 3ef6_A Toluene 1,2-dioxygenase 65.4 6 0.0002 39.1 4.8 37 384-430 3-39 (410)
142 1sc6_A PGDH, D-3-phosphoglycer 65.4 19 0.00064 36.7 8.5 66 350-427 91-177 (404)
143 1id1_A Putative potassium chan 65.0 7.3 0.00025 33.0 4.7 34 382-427 2-35 (153)
144 3sx6_A Sulfide-quinone reducta 64.7 5.8 0.0002 39.5 4.6 37 384-429 5-41 (437)
145 2cul_A Glucose-inhibited divis 64.7 6.3 0.00022 35.7 4.5 33 383-427 3-35 (232)
146 2d8a_A PH0655, probable L-thre 64.5 7.8 0.00027 37.4 5.3 48 366-426 153-200 (348)
147 2o7s_A DHQ-SDH PR, bifunctiona 64.5 8.2 0.00028 40.2 5.8 25 380-404 361-385 (523)
148 1dxl_A Dihydrolipoamide dehydr 64.5 6.9 0.00024 39.0 5.1 34 383-428 6-39 (470)
149 1j4a_A D-LDH, D-lactate dehydr 64.3 11 0.00038 37.0 6.5 66 350-427 92-178 (333)
150 3dtt_A NADP oxidoreductase; st 64.2 6.7 0.00023 36.3 4.6 39 377-427 13-51 (245)
151 2gqw_A Ferredoxin reductase; f 64.1 8 0.00027 38.2 5.4 39 383-431 7-45 (408)
152 3i3l_A Alkylhalidase CMLS; fla 64.0 8.1 0.00028 40.9 5.8 37 381-429 21-57 (591)
153 3urh_A Dihydrolipoyl dehydroge 64.0 5.9 0.0002 40.0 4.5 34 383-428 25-58 (491)
154 3hg7_A D-isomer specific 2-hyd 63.9 13 0.00045 36.8 6.9 55 362-428 103-173 (324)
155 3s5w_A L-ornithine 5-monooxyge 63.8 5.1 0.00017 39.6 4.0 38 383-428 30-68 (463)
156 3klj_A NAD(FAD)-dependent dehy 63.8 5.6 0.00019 39.4 4.2 37 382-430 8-44 (385)
157 1x7d_A Ornithine cyclodeaminas 63.4 16 0.00054 36.4 7.4 47 368-426 116-162 (350)
158 2w2k_A D-mandelate dehydrogena 63.3 14 0.00048 36.6 7.0 39 378-427 158-196 (348)
159 2gv8_A Monooxygenase; FMO, FAD 63.1 5.7 0.0002 39.5 4.2 37 382-428 5-41 (447)
160 2qcu_A Aerobic glycerol-3-phos 63.1 6.2 0.00021 40.2 4.6 34 383-428 3-36 (501)
161 2ewd_A Lactate dehydrogenase,; 63.1 8 0.00027 37.3 5.1 33 384-427 5-37 (317)
162 4eqs_A Coenzyme A disulfide re 63.0 6.5 0.00022 39.5 4.6 34 385-428 2-35 (437)
163 3evt_A Phosphoglycerate dehydr 62.9 15 0.00051 36.3 7.1 67 350-428 83-170 (324)
164 3k5p_A D-3-phosphoglycerate de 62.9 16 0.00055 37.7 7.6 67 349-427 101-188 (416)
165 3fwz_A Inner membrane protein 62.9 7.9 0.00027 32.5 4.5 32 384-427 8-39 (140)
166 2r9z_A Glutathione amide reduc 62.8 6.5 0.00022 39.7 4.5 33 383-427 4-36 (463)
167 3h28_A Sulfide-quinone reducta 62.6 6.7 0.00023 38.8 4.5 36 384-429 3-38 (430)
168 2i99_A MU-crystallin homolog; 62.5 20 0.00069 34.6 7.8 47 368-426 122-168 (312)
169 2eq6_A Pyruvate dehydrogenase 62.3 5.5 0.00019 40.1 3.9 35 382-428 5-39 (464)
170 2vhw_A Alanine dehydrogenase; 62.2 13 0.00045 37.0 6.7 36 380-427 165-200 (377)
171 4ap3_A Steroid monooxygenase; 62.2 6 0.00021 41.3 4.3 35 382-428 20-54 (549)
172 3cgb_A Pyridine nucleotide-dis 62.0 7.3 0.00025 39.4 4.8 64 357-430 7-73 (480)
173 1fl2_A Alkyl hydroperoxide red 61.9 6.2 0.00021 36.3 3.9 32 384-427 2-33 (310)
174 2i6t_A Ubiquitin-conjugating e 61.9 8.9 0.0003 37.4 5.2 35 384-428 15-49 (303)
175 2g76_A 3-PGDH, D-3-phosphoglyc 61.9 14 0.00048 36.6 6.7 65 351-427 112-197 (335)
176 1yqd_A Sinapyl alcohol dehydro 61.7 16 0.00055 35.6 7.0 38 366-403 171-208 (366)
177 4gcm_A TRXR, thioredoxin reduc 61.7 7 0.00024 36.3 4.3 31 385-427 8-38 (312)
178 2a87_A TRXR, TR, thioredoxin r 61.7 6.6 0.00023 36.9 4.1 34 382-427 13-46 (335)
179 3v76_A Flavoprotein; structura 61.6 6.6 0.00023 39.6 4.4 35 383-429 27-61 (417)
180 2qae_A Lipoamide, dihydrolipoy 61.5 7.1 0.00024 39.1 4.5 34 383-428 2-35 (468)
181 1dxy_A D-2-hydroxyisocaproate 61.4 12 0.00042 36.8 6.2 66 350-427 90-177 (333)
182 3dfz_A SIRC, precorrin-2 dehyd 61.4 6.9 0.00024 37.0 4.2 36 380-427 28-63 (223)
183 3m6i_A L-arabinitol 4-dehydrog 61.2 13 0.00046 35.8 6.3 58 357-426 155-212 (363)
184 3pp8_A Glyoxylate/hydroxypyruv 61.1 13 0.00044 36.6 6.2 66 350-427 86-171 (315)
185 3dje_A Fructosyl amine: oxygen 61.0 8 0.00027 37.8 4.7 37 383-430 6-42 (438)
186 2j6i_A Formate dehydrogenase; 60.9 13 0.00045 37.1 6.4 87 330-427 87-197 (364)
187 2weu_A Tryptophan 5-halogenase 60.9 5.7 0.0002 40.1 3.8 37 384-429 3-39 (511)
188 1pzg_A LDH, lactate dehydrogen 60.8 7.7 0.00026 38.1 4.6 33 384-427 10-42 (331)
189 1edz_A 5,10-methylenetetrahydr 60.8 12 0.00042 37.3 6.0 60 365-436 150-219 (320)
190 2hqm_A GR, grase, glutathione 60.6 6.5 0.00022 39.7 4.1 35 382-428 10-44 (479)
191 1omo_A Alanine dehydrogenase; 60.5 21 0.00071 34.8 7.6 35 368-404 112-146 (322)
192 1v8b_A Adenosylhomocysteinase; 60.5 15 0.00051 38.7 6.9 46 357-405 234-279 (479)
193 1t2d_A LDH-P, L-lactate dehydr 60.5 7.4 0.00025 38.2 4.4 33 384-427 5-37 (322)
194 3ka7_A Oxidoreductase; structu 60.3 8.3 0.00028 37.3 4.7 32 385-428 2-33 (425)
195 2hjr_A Malate dehydrogenase; m 60.2 6.8 0.00023 38.5 4.1 33 384-427 15-47 (328)
196 2e4g_A Tryptophan halogenase; 60.2 7.6 0.00026 40.1 4.6 38 383-429 25-62 (550)
197 2aqj_A Tryptophan halogenase, 60.1 7.3 0.00025 39.9 4.4 37 383-428 5-41 (538)
198 4ej6_A Putative zinc-binding d 59.9 21 0.00073 34.9 7.6 57 358-426 159-215 (370)
199 1mo9_A ORF3; nucleotide bindin 59.9 7.5 0.00026 39.9 4.5 35 382-428 42-76 (523)
200 3k30_A Histamine dehydrogenase 59.9 9.2 0.00032 40.8 5.3 34 383-428 391-424 (690)
201 4b63_A L-ornithine N5 monooxyg 59.8 5.6 0.00019 40.8 3.6 22 385-406 41-62 (501)
202 1w4x_A Phenylacetone monooxyge 59.8 8.2 0.00028 39.8 4.8 35 382-428 15-49 (542)
203 3nrn_A Uncharacterized protein 59.8 8.4 0.00029 37.6 4.6 32 385-428 2-33 (421)
204 2a8x_A Dihydrolipoyl dehydroge 59.7 6.6 0.00023 39.3 3.9 33 383-427 3-35 (464)
205 2wpf_A Trypanothione reductase 59.7 9.4 0.00032 39.0 5.1 32 383-425 7-38 (495)
206 2yqu_A 2-oxoglutarate dehydrog 59.6 7.7 0.00026 38.7 4.4 33 384-428 2-34 (455)
207 1zmd_A Dihydrolipoyl dehydroge 59.6 7.7 0.00026 38.9 4.4 34 383-428 6-39 (474)
208 3ihm_A Styrene monooxygenase A 59.5 7.4 0.00025 38.7 4.3 33 384-428 23-55 (430)
209 2pi1_A D-lactate dehydrogenase 59.5 16 0.00055 36.2 6.6 55 361-427 100-173 (334)
210 4dgs_A Dehydrogenase; structur 59.4 15 0.0005 36.7 6.4 55 361-427 129-203 (340)
211 2cdc_A Glucose dehydrogenase g 59.4 25 0.00087 34.1 8.0 33 383-427 181-213 (366)
212 4gde_A UDP-galactopyranose mut 59.1 9.3 0.00032 37.9 4.9 23 383-405 10-32 (513)
213 1wly_A CAAR, 2-haloacrylate re 58.9 20 0.00068 34.2 7.0 39 365-403 128-167 (333)
214 2bry_A NEDD9 interacting prote 58.9 8.6 0.0003 39.4 4.7 37 382-430 91-127 (497)
215 4g6h_A Rotenone-insensitive NA 58.8 4.2 0.00014 42.0 2.4 32 384-427 43-74 (502)
216 1ebd_A E3BD, dihydrolipoamide 58.7 7.5 0.00026 38.7 4.2 32 384-427 4-35 (455)
217 1hyh_A L-hicdh, L-2-hydroxyiso 58.7 11 0.00037 36.1 5.2 34 384-427 2-35 (309)
218 3qj4_A Renalase; FAD/NAD(P)-bi 58.6 5.5 0.00019 37.7 3.0 34 385-427 3-36 (342)
219 2qa2_A CABE, polyketide oxygen 58.5 8.3 0.00028 39.5 4.5 36 382-429 11-46 (499)
220 4a5l_A Thioredoxin reductase; 58.5 7.1 0.00024 35.9 3.7 31 385-427 6-36 (314)
221 1tt5_A APPBP1, amyloid protein 58.4 4.7 0.00016 42.7 2.7 39 379-428 28-66 (531)
222 2raf_A Putative dinucleotide-b 58.1 9.8 0.00034 34.4 4.5 37 379-427 15-51 (209)
223 3lk7_A UDP-N-acetylmuramoylala 57.8 9.4 0.00032 38.7 4.8 37 379-427 5-41 (451)
224 2v6b_A L-LDH, L-lactate dehydr 57.8 9.7 0.00033 36.7 4.6 33 385-427 2-34 (304)
225 1pl8_A Human sorbitol dehydrog 57.5 18 0.00062 35.0 6.5 49 366-426 156-204 (356)
226 1onf_A GR, grase, glutathione 57.5 8.4 0.00029 39.2 4.4 33 384-428 3-35 (500)
227 1gdh_A D-glycerate dehydrogena 57.4 16 0.00055 35.7 6.2 64 351-426 90-177 (320)
228 2qa1_A PGAE, polyketide oxygen 57.2 8.7 0.0003 39.4 4.4 37 380-428 8-44 (500)
229 3jtm_A Formate dehydrogenase, 57.2 20 0.00069 35.8 6.9 67 350-428 108-197 (351)
230 3l8k_A Dihydrolipoyl dehydroge 57.0 9.5 0.00032 38.3 4.6 33 384-428 5-37 (466)
231 4eez_A Alcohol dehydrogenase 1 57.0 30 0.001 32.9 7.9 48 367-426 149-196 (348)
232 3ce6_A Adenosylhomocysteinase; 56.8 16 0.00054 38.5 6.4 40 375-426 266-305 (494)
233 3ihg_A RDME; flavoenzyme, anth 56.8 8.1 0.00028 39.4 4.1 35 383-429 5-39 (535)
234 1lld_A L-lactate dehydrogenase 56.7 11 0.00039 35.7 4.9 36 383-428 7-42 (319)
235 3o0h_A Glutathione reductase; 56.7 10 0.00034 38.3 4.7 33 383-427 26-58 (484)
236 1q1r_A Putidaredoxin reductase 56.7 11 0.00037 37.6 5.0 37 383-429 4-40 (431)
237 3gvx_A Glycerate dehydrogenase 56.7 23 0.00079 34.5 7.1 55 362-428 85-155 (290)
238 3gwf_A Cyclohexanone monooxyge 56.6 8 0.00027 40.3 4.1 35 383-428 8-42 (540)
239 3uko_A Alcohol dehydrogenase c 56.5 22 0.00076 34.6 7.0 38 378-426 189-226 (378)
240 3lad_A Dihydrolipoamide dehydr 56.3 11 0.00038 37.6 5.0 34 383-428 3-36 (476)
241 3lov_A Protoporphyrinogen oxid 56.3 14 0.00048 36.5 5.6 36 383-428 4-39 (475)
242 1ges_A Glutathione reductase; 56.2 8.1 0.00028 38.7 3.9 33 383-427 4-36 (450)
243 1v59_A Dihydrolipoamide dehydr 56.2 10 0.00034 38.0 4.6 33 384-428 6-38 (478)
244 2bc0_A NADH oxidase; flavoprot 56.1 9.4 0.00032 38.7 4.4 37 383-428 35-71 (490)
245 3cmm_A Ubiquitin-activating en 56.1 9.8 0.00034 43.5 5.0 38 379-427 23-60 (1015)
246 2dpo_A L-gulonate 3-dehydrogen 56.0 10 0.00035 37.2 4.5 33 383-427 6-38 (319)
247 1lvl_A Dihydrolipoamide dehydr 56.0 10 0.00034 38.1 4.6 33 383-427 5-37 (458)
248 3d64_A Adenosylhomocysteinase; 55.9 10 0.00036 40.0 4.8 53 360-427 257-309 (494)
249 3gvi_A Malate dehydrogenase; N 55.8 11 0.00038 37.3 4.7 36 381-427 5-40 (324)
250 2x8r_A Glycosyl hydrolase; pep 55.6 21 0.00072 32.7 6.3 49 276-333 90-138 (210)
251 1e3j_A NADP(H)-dependent ketos 55.4 22 0.00076 34.2 6.7 36 366-402 153-188 (352)
252 2nac_A NAD-dependent formate d 55.3 18 0.0006 36.9 6.3 38 378-427 186-223 (393)
253 4a2c_A Galactitol-1-phosphate 55.3 34 0.0012 32.5 7.9 42 360-402 139-180 (346)
254 2nvu_B Maltose binding protein 55.2 5.7 0.00019 43.3 2.8 36 382-428 410-445 (805)
255 2v3a_A Rubredoxin reductase; a 55.2 9.6 0.00033 37.0 4.2 35 383-427 4-38 (384)
256 2pyx_A Tryptophan halogenase; 55.1 9.3 0.00032 39.1 4.2 39 383-428 7-52 (526)
257 2rgh_A Alpha-glycerophosphate 55.1 11 0.00036 39.6 4.7 35 383-429 32-66 (571)
258 3fpz_A Thiazole biosynthetic e 54.6 13 0.00043 35.3 4.8 36 382-427 64-99 (326)
259 3e1t_A Halogenase; flavoprotei 54.6 8.8 0.0003 39.1 3.9 34 383-428 7-40 (512)
260 1ojt_A Surface protein; redox- 54.3 11 0.00038 38.0 4.6 34 383-428 6-39 (482)
261 3da1_A Glycerol-3-phosphate de 54.2 8.7 0.0003 40.1 3.9 33 383-427 18-50 (561)
262 2ew2_A 2-dehydropantoate 2-red 54.2 12 0.0004 34.7 4.4 32 384-427 4-35 (316)
263 2zb4_A Prostaglandin reductase 54.2 24 0.00084 33.9 6.8 52 364-426 140-194 (357)
264 1m6i_A Programmed cell death p 54.2 13 0.00045 37.9 5.1 38 382-429 10-47 (493)
265 3g3e_A D-amino-acid oxidase; F 54.2 11 0.00037 35.7 4.2 38 385-428 2-39 (351)
266 4fk1_A Putative thioredoxin re 54.0 11 0.00038 35.0 4.2 33 383-427 6-38 (304)
267 1a5z_A L-lactate dehydrogenase 54.0 14 0.00049 35.7 5.2 33 385-427 2-34 (319)
268 3tri_A Pyrroline-5-carboxylate 54.0 14 0.00046 35.2 4.9 36 383-427 3-38 (280)
269 2yq5_A D-isomer specific 2-hyd 54.0 25 0.00084 35.1 7.0 66 351-428 93-181 (343)
270 3iwa_A FAD-dependent pyridine 54.0 7.4 0.00025 39.0 3.2 38 383-430 3-40 (472)
271 2cf5_A Atccad5, CAD, cinnamyl 54.0 29 0.001 33.6 7.4 35 369-403 167-201 (357)
272 2e1m_A L-glutamate oxidase; L- 53.9 14 0.00049 37.1 5.3 35 381-427 42-76 (376)
273 1rsg_A FMS1 protein; FAD bindi 53.8 9.4 0.00032 38.7 4.0 24 382-405 7-30 (516)
274 1qp8_A Formate dehydrogenase; 53.8 25 0.00085 34.2 6.8 67 350-428 71-157 (303)
275 3nyc_A D-arginine dehydrogenas 53.8 7.5 0.00026 36.6 3.0 33 383-428 9-41 (381)
276 1s3e_A Amine oxidase [flavin-c 53.7 12 0.0004 37.9 4.7 35 383-429 4-38 (520)
277 3dk9_A Grase, GR, glutathione 53.5 11 0.00037 37.9 4.3 35 382-428 19-53 (478)
278 2vvm_A Monoamine oxidase N; FA 53.3 12 0.00041 37.3 4.6 21 384-404 40-60 (495)
279 3atr_A Conserved archaeal prot 53.2 6.4 0.00022 39.3 2.6 34 384-429 7-40 (453)
280 1o94_A Tmadh, trimethylamine d 53.1 12 0.0004 40.5 4.8 35 382-428 388-422 (729)
281 1xhc_A NADH oxidase /nitrite r 53.0 8 0.00028 37.8 3.2 35 383-430 8-42 (367)
282 2i0z_A NAD(FAD)-utilizing dehy 52.9 12 0.0004 37.5 4.4 33 384-428 27-59 (447)
283 1ks9_A KPA reductase;, 2-dehyd 52.7 13 0.00045 34.1 4.4 31 385-427 2-32 (291)
284 2gqf_A Hypothetical protein HI 52.7 8.9 0.0003 38.2 3.5 35 383-429 4-38 (401)
285 3gg9_A D-3-phosphoglycerate de 52.7 26 0.00088 35.0 6.9 27 378-404 155-181 (352)
286 4b7c_A Probable oxidoreductase 52.6 27 0.00093 33.2 6.8 39 365-403 132-171 (336)
287 1fec_A Trypanothione reductase 52.3 15 0.00051 37.3 5.2 32 383-425 3-34 (490)
288 3k6j_A Protein F01G10.3, confi 51.8 12 0.00042 39.0 4.5 22 384-405 55-76 (460)
289 2j3h_A NADP-dependent oxidored 51.7 24 0.00083 33.6 6.3 38 366-403 139-177 (345)
290 1ldn_A L-lactate dehydrogenase 51.7 17 0.00058 35.3 5.3 34 384-427 7-40 (316)
291 2r0c_A REBC; flavin adenine di 51.6 12 0.00042 38.7 4.5 34 383-428 26-59 (549)
292 2vns_A Metalloreductase steap3 51.5 14 0.00048 33.5 4.4 37 379-427 24-60 (215)
293 1p0f_A NADP-dependent alcohol 51.4 32 0.0011 33.4 7.2 37 379-426 188-224 (373)
294 2fzw_A Alcohol dehydrogenase c 51.3 32 0.0011 33.3 7.2 38 378-426 186-223 (373)
295 3kd9_A Coenzyme A disulfide re 51.3 10 0.00035 37.7 3.7 37 383-429 3-39 (449)
296 1cjc_A Protein (adrenodoxin re 51.3 16 0.00054 37.2 5.2 35 383-427 6-40 (460)
297 2iid_A L-amino-acid oxidase; f 51.3 17 0.00059 36.2 5.4 23 383-405 33-55 (498)
298 2b9w_A Putative aminooxidase; 51.2 14 0.00048 35.8 4.6 23 382-404 5-27 (424)
299 1kyq_A Met8P, siroheme biosynt 51.1 9.3 0.00032 37.2 3.3 36 380-427 10-45 (274)
300 4e5n_A Thermostable phosphite 51.1 18 0.00062 35.7 5.4 66 351-428 90-178 (330)
301 2bi7_A UDP-galactopyranose mut 51.1 13 0.00045 36.6 4.4 22 383-404 3-24 (384)
302 3c85_A Putative glutathione-re 50.8 12 0.00042 32.3 3.8 25 380-404 36-60 (183)
303 3ip1_A Alcohol dehydrogenase, 50.7 29 0.00099 34.3 6.9 46 370-426 200-246 (404)
304 1z82_A Glycerol-3-phosphate de 50.7 15 0.00051 35.3 4.7 33 383-427 14-46 (335)
305 3d1l_A Putative NADP oxidoredu 50.7 17 0.00058 33.4 4.9 37 380-427 7-43 (266)
306 2yg5_A Putrescine oxidase; oxi 50.5 11 0.00039 36.8 3.9 33 383-427 5-37 (453)
307 3ics_A Coenzyme A-disulfide re 50.5 11 0.00037 39.0 3.9 40 381-430 34-73 (588)
308 1qor_A Quinone oxidoreductase; 50.4 35 0.0012 32.2 7.2 39 366-404 124-163 (327)
309 3hdj_A Probable ornithine cycl 50.2 38 0.0013 33.1 7.5 36 382-427 120-155 (313)
310 1f8f_A Benzyl alcohol dehydrog 50.2 36 0.0012 32.9 7.4 38 366-403 174-211 (371)
311 4fs3_A Enoyl-[acyl-carrier-pro 50.1 16 0.00056 33.8 4.7 36 380-427 3-41 (256)
312 1kol_A Formaldehyde dehydrogen 49.9 30 0.001 33.8 6.8 49 366-426 170-218 (398)
313 1mx3_A CTBP1, C-terminal bindi 49.9 25 0.00085 35.0 6.2 85 330-427 88-200 (347)
314 3fpc_A NADP-dependent alcohol 49.7 17 0.00058 35.0 4.9 49 366-426 151-199 (352)
315 4dna_A Probable glutathione re 49.5 13 0.00045 37.2 4.2 33 383-427 5-37 (463)
316 3p7m_A Malate dehydrogenase; p 49.4 17 0.00057 35.8 4.9 36 381-427 3-38 (321)
317 2d4a_B Malate dehydrogenase; a 49.3 18 0.0006 35.2 4.9 32 385-427 1-32 (308)
318 2ivd_A PPO, PPOX, protoporphyr 49.2 12 0.00042 36.9 3.9 22 383-404 16-37 (478)
319 3l4b_C TRKA K+ channel protien 49.0 15 0.00051 32.9 4.1 31 385-427 2-32 (218)
320 4dgk_A Phytoene dehydrogenase; 48.9 13 0.00045 36.9 4.1 22 384-405 2-23 (501)
321 1v3u_A Leukotriene B4 12- hydr 48.8 30 0.001 32.8 6.4 40 364-403 127-167 (333)
322 3d0o_A L-LDH 1, L-lactate dehy 48.4 23 0.00077 34.5 5.6 36 382-427 5-40 (317)
323 3ghy_A Ketopantoate reductase 48.1 16 0.00055 35.2 4.5 32 383-426 3-34 (335)
324 3pvc_A TRNA 5-methylaminomethy 48.1 13 0.00043 39.7 4.0 34 383-428 264-297 (689)
325 1ps9_A 2,4-dienoyl-COA reducta 48.0 14 0.00047 39.3 4.3 34 383-428 373-406 (671)
326 1e3i_A Alcohol dehydrogenase, 47.4 34 0.0012 33.2 6.7 37 379-426 192-228 (376)
327 3ps9_A TRNA 5-methylaminomethy 47.4 14 0.00049 39.1 4.3 33 384-428 273-305 (676)
328 4eye_A Probable oxidoreductase 47.4 24 0.00084 33.9 5.6 48 367-426 144-192 (342)
329 2x8g_A Thioredoxin glutathione 47.2 16 0.00053 38.0 4.5 33 382-426 106-138 (598)
330 2ph5_A Homospermidine synthase 47.1 23 0.0008 37.3 5.8 38 382-427 12-49 (480)
331 3ntd_A FAD-dependent pyridine 47.1 12 0.00041 38.2 3.5 37 384-430 2-38 (565)
332 1yqg_A Pyrroline-5-carboxylate 47.1 22 0.00076 32.4 5.0 32 385-427 2-33 (263)
333 1piw_A Hypothetical zinc-type 47.0 44 0.0015 32.3 7.3 35 368-403 166-200 (360)
334 4hy3_A Phosphoglycerate oxidor 46.8 29 0.00099 35.0 6.2 55 361-427 133-208 (365)
335 1y0p_A Fumarate reductase flav 46.8 24 0.00082 36.5 5.7 40 379-430 122-161 (571)
336 3o38_A Short chain dehydrogena 46.7 20 0.00067 32.7 4.6 36 380-427 19-56 (266)
337 2jhf_A Alcohol dehydrogenase E 46.6 36 0.0012 33.0 6.7 37 379-426 188-224 (374)
338 1zcj_A Peroxisomal bifunctiona 46.5 25 0.00085 36.0 5.8 32 384-427 38-69 (463)
339 3mog_A Probable 3-hydroxybutyr 46.4 17 0.00057 37.9 4.5 33 383-427 5-37 (483)
340 3fef_A Putative glucosidase LP 46.2 15 0.00051 38.2 4.1 38 381-427 3-42 (450)
341 3hdq_A UDP-galactopyranose mut 46.2 19 0.00064 36.5 4.7 34 382-427 28-61 (397)
342 3ic9_A Dihydrolipoamide dehydr 46.2 14 0.00049 37.5 3.9 32 384-427 9-40 (492)
343 3nlc_A Uncharacterized protein 46.1 12 0.0004 39.7 3.3 33 383-427 107-139 (549)
344 1zej_A HBD-9, 3-hydroxyacyl-CO 46.1 17 0.00059 35.4 4.3 22 383-405 12-33 (293)
345 3c4a_A Probable tryptophan hyd 46.0 13 0.00044 35.9 3.4 34 385-428 2-35 (381)
346 1bg6_A N-(1-D-carboxylethyl)-L 45.8 20 0.00068 34.1 4.6 32 384-427 5-36 (359)
347 2c2x_A Methylenetetrahydrofola 45.7 26 0.00088 34.6 5.5 43 361-403 136-179 (281)
348 1lqt_A FPRA; NADP+ derivative, 45.6 12 0.00043 37.9 3.3 38 383-427 3-42 (456)
349 3nks_A Protoporphyrinogen oxid 45.6 16 0.00054 36.0 4.0 35 384-428 3-37 (477)
350 3g17_A Similar to 2-dehydropan 45.5 18 0.0006 34.3 4.2 22 384-405 3-24 (294)
351 3i6d_A Protoporphyrinogen oxid 45.3 13 0.00046 36.1 3.4 22 384-405 6-27 (470)
352 1iz0_A Quinone oxidoreductase; 45.3 49 0.0017 30.9 7.2 37 366-403 110-147 (302)
353 1cdo_A Alcohol dehydrogenase; 45.3 38 0.0013 32.8 6.7 37 379-426 189-225 (374)
354 3oc4_A Oxidoreductase, pyridin 45.3 13 0.00045 37.0 3.4 37 384-430 3-39 (452)
355 2x5o_A UDP-N-acetylmuramoylala 45.1 14 0.00047 37.3 3.5 37 380-428 2-38 (439)
356 3ggo_A Prephenate dehydrogenas 45.1 21 0.00072 34.6 4.8 34 384-427 34-67 (314)
357 1txg_A Glycerol-3-phosphate de 45.0 22 0.00075 33.5 4.8 30 385-426 2-31 (335)
358 2zxi_A TRNA uridine 5-carboxym 45.0 12 0.00041 40.7 3.3 33 383-427 27-59 (637)
359 1yb5_A Quinone oxidoreductase; 44.9 47 0.0016 32.1 7.2 39 365-403 153-192 (351)
360 1oju_A MDH, malate dehydrogena 44.9 24 0.00082 34.3 5.1 34 385-428 2-35 (294)
361 1pn0_A Phenol 2-monooxygenase; 44.9 17 0.00059 38.8 4.5 39 383-428 8-46 (665)
362 3two_A Mannitol dehydrogenase; 44.9 39 0.0013 32.4 6.6 32 370-402 165-196 (348)
363 1pjq_A CYSG, siroheme synthase 44.8 19 0.00067 36.8 4.7 35 380-426 9-43 (457)
364 3goh_A Alcohol dehydrogenase, 44.6 58 0.002 30.7 7.6 38 365-403 126-163 (315)
365 2bcg_G Secretory pathway GDP d 44.6 19 0.00064 36.1 4.4 36 383-430 11-46 (453)
366 2b5w_A Glucose dehydrogenase; 44.4 38 0.0013 32.7 6.4 36 381-426 171-207 (357)
367 3qfa_A Thioredoxin reductase 1 44.4 18 0.00063 37.0 4.4 33 383-427 32-64 (519)
368 1ygy_A PGDH, D-3-phosphoglycer 44.4 31 0.0011 36.0 6.2 66 350-427 88-174 (529)
369 1guz_A Malate dehydrogenase; o 44.4 21 0.00073 34.4 4.6 33 385-427 2-34 (310)
370 3fmw_A Oxygenase; mithramycin, 44.2 18 0.0006 38.0 4.3 34 383-428 49-82 (570)
371 3cmm_A Ubiquitin-activating en 44.2 16 0.00056 41.7 4.3 44 379-428 421-464 (1015)
372 3i83_A 2-dehydropantoate 2-red 44.2 20 0.00069 34.3 4.4 32 384-427 3-34 (320)
373 2dph_A Formaldehyde dismutase; 44.1 50 0.0017 32.4 7.4 37 366-403 170-206 (398)
374 1gte_A Dihydropyrimidine dehyd 44.0 17 0.00057 41.0 4.3 34 383-427 187-220 (1025)
375 3e8x_A Putative NAD-dependent 43.6 24 0.00083 31.3 4.6 26 379-404 17-43 (236)
376 1ur5_A Malate dehydrogenase; o 43.1 21 0.00072 34.5 4.4 33 384-427 3-35 (309)
377 2rcy_A Pyrroline carboxylate r 43.0 28 0.00097 31.6 5.1 37 383-427 4-40 (262)
378 1v0j_A UDP-galactopyranose mut 42.9 16 0.00053 36.1 3.5 23 383-405 7-29 (399)
379 3qwb_A Probable quinone oxidor 42.8 58 0.002 30.9 7.4 41 374-426 140-181 (334)
380 3hn2_A 2-dehydropantoate 2-red 42.8 18 0.00062 34.5 3.8 32 384-427 3-34 (312)
381 2dkh_A 3-hydroxybenzoate hydro 42.5 14 0.00049 39.0 3.4 35 383-428 32-66 (639)
382 2dlx_A UBX domain-containing p 42.5 34 0.0012 30.0 5.3 31 316-350 69-99 (153)
383 3dgh_A TRXR-1, thioredoxin red 42.5 20 0.00069 36.0 4.3 33 382-426 8-40 (483)
384 1qo8_A Flavocytochrome C3 fuma 42.5 25 0.00087 36.3 5.1 37 382-430 120-156 (566)
385 3k96_A Glycerol-3-phosphate de 42.4 20 0.00068 35.6 4.2 33 383-427 29-61 (356)
386 1sez_A Protoporphyrinogen oxid 42.2 19 0.00067 35.8 4.1 22 383-404 13-34 (504)
387 1tt7_A YHFP; alcohol dehydroge 42.2 67 0.0023 30.4 7.7 20 384-403 152-172 (330)
388 4gut_A Lysine-specific histone 42.1 27 0.00091 38.5 5.5 35 383-429 336-370 (776)
389 1rjw_A ADH-HT, alcohol dehydro 42.0 43 0.0015 32.0 6.4 33 370-403 153-185 (339)
390 1i8t_A UDP-galactopyranose mut 41.9 18 0.00061 35.4 3.7 21 384-404 2-22 (367)
391 2gmh_A Electron transfer flavo 41.7 28 0.00095 36.5 5.4 38 384-429 36-75 (584)
392 3dgz_A Thioredoxin reductase 2 41.4 20 0.00069 36.1 4.1 32 383-426 6-37 (488)
393 1jfx_A 1,4-beta-N-acetylmurami 41.3 52 0.0018 30.1 6.6 50 275-333 90-139 (217)
394 1yj8_A Glycerol-3-phosphate de 41.2 20 0.0007 35.0 4.0 40 384-428 22-61 (375)
395 3doj_A AT3G25530, dehydrogenas 41.1 30 0.001 33.0 5.1 35 380-426 18-52 (310)
396 2f1k_A Prephenate dehydrogenas 41.0 25 0.00086 32.4 4.4 31 385-427 2-32 (279)
397 3eag_A UDP-N-acetylmuramate:L- 40.9 23 0.00077 34.3 4.2 32 384-427 5-37 (326)
398 1pj5_A N,N-dimethylglycine oxi 40.8 23 0.00077 38.6 4.6 36 383-429 4-39 (830)
399 2cdu_A NADPH oxidase; flavoenz 40.3 17 0.0006 36.1 3.4 34 385-428 2-35 (452)
400 2g5c_A Prephenate dehydrogenas 40.1 30 0.001 32.0 4.8 34 384-427 2-35 (281)
401 1nhp_A NADH peroxidase; oxidor 40.1 18 0.0006 36.0 3.4 35 385-429 2-36 (447)
402 2zqz_A L-LDH, L-lactate dehydr 40.1 35 0.0012 33.5 5.5 35 383-427 9-43 (326)
403 3uog_A Alcohol dehydrogenase; 40.0 42 0.0014 32.5 6.0 44 371-426 178-221 (363)
404 3tl2_A Malate dehydrogenase; c 40.0 28 0.00097 34.1 4.8 36 381-427 6-41 (315)
405 2h6e_A ADH-4, D-arabinose 1-de 39.6 36 0.0012 32.6 5.4 32 370-402 155-190 (344)
406 1jay_A Coenzyme F420H2:NADP+ o 39.5 24 0.00083 31.0 3.9 31 385-427 2-33 (212)
407 2eih_A Alcohol dehydrogenase; 39.4 47 0.0016 31.7 6.2 34 370-403 154-188 (343)
408 3nx4_A Putative oxidoreductase 39.2 62 0.0021 30.4 6.9 29 375-403 139-168 (324)
409 1b37_A Protein (polyamine oxid 39.2 28 0.00096 34.6 4.7 35 383-428 4-38 (472)
410 2gag_A Heterotetrameric sarcos 39.1 23 0.00078 39.7 4.5 34 383-428 128-161 (965)
411 4aj2_A L-lactate dehydrogenase 39.1 32 0.0011 34.1 5.1 38 380-427 16-53 (331)
412 1xa0_A Putative NADPH dependen 38.8 63 0.0022 30.5 6.9 19 384-402 151-170 (328)
413 3nkl_A UDP-D-quinovosamine 4-d 38.5 23 0.00078 29.3 3.3 22 383-404 4-25 (141)
414 4at0_A 3-ketosteroid-delta4-5a 38.5 26 0.0009 35.6 4.5 35 384-430 42-76 (510)
415 3vku_A L-LDH, L-lactate dehydr 38.3 38 0.0013 33.5 5.5 35 382-426 8-42 (326)
416 2h78_A Hibadh, 3-hydroxyisobut 38.3 26 0.00091 32.8 4.2 32 384-427 4-35 (302)
417 1ez4_A Lactate dehydrogenase; 38.3 38 0.0013 33.0 5.4 34 384-427 6-39 (318)
418 2hcy_A Alcohol dehydrogenase 1 38.2 53 0.0018 31.5 6.3 44 370-426 158-202 (347)
419 3g0o_A 3-hydroxyisobutyrate de 38.2 29 0.00098 32.9 4.4 32 384-427 8-39 (303)
420 2wag_A Lysozyme, putative; hyd 38.2 33 0.0011 31.9 4.7 58 264-332 87-144 (220)
421 1xdi_A RV3303C-LPDA; reductase 38.1 19 0.00067 36.4 3.4 36 384-428 3-38 (499)
422 3l6d_A Putative oxidoreductase 38.0 36 0.0012 32.4 5.1 35 380-426 6-40 (306)
423 2uyy_A N-PAC protein; long-cha 37.7 28 0.00097 32.8 4.3 32 384-427 31-62 (316)
424 4dll_A 2-hydroxy-3-oxopropiona 37.7 30 0.001 33.2 4.5 33 382-426 30-62 (320)
425 3c4n_A Uncharacterized protein 37.0 21 0.00073 34.9 3.4 35 384-428 37-71 (405)
426 1uuf_A YAHK, zinc-type alcohol 36.9 59 0.002 31.8 6.5 34 368-402 181-214 (369)
427 3nep_X Malate dehydrogenase; h 36.3 39 0.0013 33.2 5.2 34 385-428 2-35 (314)
428 1y56_A Hypothetical protein PH 36.2 10 0.00035 38.6 1.0 33 383-428 108-140 (493)
429 3hwr_A 2-dehydropantoate 2-red 36.0 20 0.00069 34.4 3.0 26 380-405 16-41 (318)
430 3ego_A Probable 2-dehydropanto 36.0 30 0.001 33.1 4.2 20 384-403 3-22 (307)
431 2xxj_A L-LDH, L-lactate dehydr 35.7 35 0.0012 33.2 4.6 34 384-427 1-34 (310)
432 2izz_A Pyrroline-5-carboxylate 35.7 31 0.0011 33.2 4.3 37 383-427 22-58 (322)
433 1rp0_A ARA6, thiazole biosynth 35.7 19 0.00066 33.6 2.7 37 382-429 38-74 (284)
434 2c0c_A Zinc binding alcohol de 35.7 38 0.0013 32.9 4.9 33 371-403 152-185 (362)
435 1d5t_A Guanine nucleotide diss 35.5 34 0.0012 34.1 4.6 36 383-430 6-41 (433)
436 3pqe_A L-LDH, L-lactate dehydr 35.5 46 0.0016 32.9 5.5 34 383-426 5-38 (326)
437 2z3y_A Lysine-specific histone 35.4 35 0.0012 36.3 5.0 23 382-404 106-128 (662)
438 3pef_A 6-phosphogluconate dehy 35.4 35 0.0012 31.9 4.4 32 384-427 2-33 (287)
439 3pdu_A 3-hydroxyisobutyrate de 35.2 36 0.0012 31.8 4.5 32 384-427 2-33 (287)
440 1kdg_A CDH, cellobiose dehydro 35.2 31 0.0011 35.4 4.4 34 383-428 7-40 (546)
441 3s2e_A Zinc-containing alcohol 34.9 57 0.002 31.0 6.0 44 370-426 155-198 (340)
442 2gf2_A Hibadh, 3-hydroxyisobut 34.8 30 0.001 32.1 3.9 31 385-427 2-32 (296)
443 3keo_A Redox-sensing transcrip 34.8 31 0.001 32.4 3.9 35 368-402 69-103 (212)
444 3ces_A MNMG, tRNA uridine 5-ca 34.7 32 0.0011 37.5 4.5 33 383-427 28-60 (651)
445 1np3_A Ketol-acid reductoisome 34.6 27 0.00091 34.1 3.6 34 382-427 15-48 (338)
446 4b63_A L-ornithine N5 monooxyg 34.4 32 0.0011 35.2 4.3 28 377-404 240-267 (501)
447 1h2b_A Alcohol dehydrogenase; 34.1 53 0.0018 31.8 5.6 33 370-402 173-206 (359)
448 2wdq_A Succinate dehydrogenase 34.1 34 0.0012 36.0 4.6 36 383-430 7-42 (588)
449 3ldh_A Lactate dehydrogenase; 34.1 46 0.0016 33.2 5.3 35 382-426 20-54 (330)
450 3kb6_A D-lactate dehydrogenase 33.8 66 0.0023 31.7 6.3 27 378-404 136-162 (334)
451 3c24_A Putative oxidoreductase 33.8 34 0.0012 31.9 4.1 32 384-427 12-44 (286)
452 3qsg_A NAD-binding phosphogluc 33.7 45 0.0015 31.9 5.0 34 383-427 24-57 (312)
453 1vpd_A Tartronate semialdehyde 33.7 34 0.0011 31.8 4.0 32 384-427 6-37 (299)
454 1vj0_A Alcohol dehydrogenase, 33.5 50 0.0017 32.3 5.4 37 366-402 179-215 (380)
455 2j8z_A Quinone oxidoreductase; 33.4 73 0.0025 30.7 6.5 38 366-403 146-184 (354)
456 3cky_A 2-hydroxymethyl glutara 33.4 35 0.0012 31.8 4.1 32 384-427 5-36 (301)
457 4ea9_A Perosamine N-acetyltran 33.3 33 0.0011 30.8 3.8 26 378-403 7-32 (220)
458 1y6j_A L-lactate dehydrogenase 33.1 38 0.0013 33.0 4.4 34 384-427 8-41 (318)
459 4fgw_A Glycerol-3-phosphate de 33.0 25 0.00087 35.9 3.3 22 384-405 35-56 (391)
460 1cjc_A Protein (adrenodoxin re 32.8 71 0.0024 32.3 6.6 50 380-430 142-201 (460)
461 1zsy_A Mitochondrial 2-enoyl t 32.8 78 0.0027 30.4 6.6 33 371-403 156-189 (357)
462 2gv8_A Monooxygenase; FMO, FAD 32.8 28 0.00095 34.5 3.5 23 382-404 211-233 (447)
463 3t37_A Probable dehydrogenase; 32.8 17 0.0006 36.5 2.0 21 383-403 17-37 (526)
464 3jyn_A Quinone oxidoreductase; 32.7 1.2E+02 0.0042 28.6 7.9 26 379-404 137-163 (325)
465 3jv7_A ADH-A; dehydrogenase, n 32.6 55 0.0019 31.2 5.5 34 369-402 157-191 (345)
466 3k13_A 5-methyltetrahydrofolat 32.2 98 0.0033 30.5 7.2 46 316-363 95-147 (300)
467 1kf6_A Fumarate reductase flav 32.0 41 0.0014 35.5 4.8 36 384-429 6-41 (602)
468 3gt0_A Pyrroline-5-carboxylate 31.9 43 0.0015 30.6 4.4 35 384-426 3-37 (247)
469 2e5v_A L-aspartate oxidase; ar 31.9 37 0.0013 34.4 4.3 30 386-427 2-31 (472)
470 3cp8_A TRNA uridine 5-carboxym 31.5 38 0.0013 36.8 4.5 34 382-427 20-53 (641)
471 3zwc_A Peroxisomal bifunctiona 31.4 33 0.0011 37.9 4.0 32 384-427 317-348 (742)
472 3b1f_A Putative prephenate deh 31.4 56 0.0019 30.3 5.2 35 383-427 6-40 (290)
473 1mld_A Malate dehydrogenase; o 31.2 31 0.0011 33.5 3.4 34 385-428 2-36 (314)
474 1evy_A Glycerol-3-phosphate de 31.0 22 0.00076 34.4 2.4 31 385-427 17-47 (366)
475 2wtb_A MFP2, fatty acid multif 30.8 34 0.0012 37.4 4.0 32 384-427 313-344 (725)
476 1wdk_A Fatty oxidation complex 30.8 51 0.0017 35.9 5.4 36 380-427 311-346 (715)
477 3pi7_A NADH oxidoreductase; gr 30.6 69 0.0023 30.7 5.8 42 372-426 155-197 (349)
478 2axq_A Saccharopine dehydrogen 30.6 22 0.00074 36.8 2.3 27 378-404 18-44 (467)
479 1x0v_A GPD-C, GPDH-C, glycerol 30.4 34 0.0012 32.7 3.5 41 383-428 8-48 (354)
480 3fys_A Protein DEGV; fatty aci 30.0 49 0.0017 32.6 4.7 152 209-417 16-178 (315)
481 3d3w_A L-xylulose reductase; u 29.9 63 0.0021 28.7 5.0 36 380-427 4-40 (244)
482 2xag_A Lysine-specific histone 29.6 47 0.0016 37.1 5.0 23 382-404 277-299 (852)
483 1hdo_A Biliverdin IX beta redu 29.4 65 0.0022 27.3 4.9 33 383-427 3-36 (206)
484 3gms_A Putative NADPH:quinone 29.4 1.3E+02 0.0043 28.7 7.4 35 380-426 142-177 (340)
485 4ap3_A Steroid monooxygenase; 29.3 67 0.0023 33.4 5.8 37 381-429 189-225 (549)
486 3pl8_A Pyranose 2-oxidase; sub 29.1 44 0.0015 35.5 4.4 36 383-430 46-81 (623)
487 2qyt_A 2-dehydropantoate 2-red 29.0 36 0.0012 31.6 3.4 22 384-405 9-30 (317)
488 4b1b_A TRXR, thioredoxin reduc 29.0 37 0.0013 35.6 3.8 40 375-426 30-73 (542)
489 4huj_A Uncharacterized protein 29.0 36 0.0012 30.8 3.3 21 384-404 24-44 (220)
490 3gpi_A NAD-dependent epimerase 28.3 57 0.0019 29.7 4.5 34 382-427 2-35 (286)
491 3fi9_A Malate dehydrogenase; s 28.1 63 0.0022 32.2 5.1 37 381-427 6-43 (343)
492 3q9t_A Choline dehydrogenase a 28.1 23 0.00079 37.5 2.0 20 385-404 8-27 (577)
493 2zyd_A 6-phosphogluconate dehy 28.0 41 0.0014 34.8 3.9 35 380-426 12-46 (480)
494 3k31_A Enoyl-(acyl-carrier-pro 28.0 62 0.0021 30.4 4.8 38 378-427 25-65 (296)
495 3qvp_A Glucose oxidase; oxidor 27.8 29 0.00098 36.9 2.7 23 381-403 15-39 (583)
496 4dsg_A UDP-galactopyranose mut 27.7 37 0.0013 34.5 3.4 35 382-427 8-42 (484)
497 4fgs_A Probable dehydrogenase 27.5 75 0.0026 30.5 5.4 38 379-427 25-62 (273)
498 4ezb_A Uncharacterized conserv 27.5 41 0.0014 32.4 3.5 33 384-427 25-57 (317)
499 3vtz_A Glucose 1-dehydrogenase 27.4 73 0.0025 29.4 5.2 39 378-427 9-47 (269)
500 2gjc_A Thiazole biosynthetic e 27.4 35 0.0012 33.8 3.1 39 382-430 64-102 (326)
No 1
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=100.00 E-value=2.2e-141 Score=1115.59 Aligned_cols=357 Identities=56% Similarity=0.968 Sum_probs=352.4
Q ss_pred ccccccccCcCCCcCCCCCHHHHhhcccCCCCCCccccHHHHHHHHHHHhhcCCCchhHHHHHHHHHhhhhhhHHHHhhh
Q 012532 102 ASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLID 181 (461)
Q Consensus 102 ~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~R~~~~~~~~~~~l~Ky~~L~~L~~rNe~LFY~ll~~ 181 (461)
++|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|++.||++++++|+||+||++||++||+|||||+++
T Consensus 1 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~ 80 (555)
T 1gq2_A 1 KKGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSDLDRYILLMSLQDRNEKLFYKVLTS 80 (555)
T ss_dssp CCTTHHHHCTTTCCGGGSCHHHHHHTTCTTSSCSCBCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CChhhhccCCcccCCCCCCHHHHHHCCCccCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhcCcceeeehhhHhh
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCceEEEEecCceeeccCCCCCCccccchh
Q 012532 182 NVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVG 261 (461)
Q Consensus 182 ~~ee~lPIvYTPtVG~aC~~~s~i~r~p~GlYis~~d~g~i~~il~Nwp~~~v~viVVTDGerILGLGDlG~~GmgI~iG 261 (461)
|++|+|||+||||||++|++||+|||+|+|+|+|++|+|+++++++|||.++|+|||||||||||||||+|++||+||||
T Consensus 81 ~~~e~lpivYTP~V~~ac~~~s~i~~~p~g~yis~~d~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g~~ipvG 160 (555)
T 1gq2_A 81 DIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVG 160 (555)
T ss_dssp THHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHHTSSCSCCCEEEEECSSSCGGGCCCGGGGGHHHHH
T ss_pred hHHHhcCcccCchHHHHHHHHHHHhcChhhhhcccCCHHHHHHHHhcCCCCCcEEEEEEccccccccCCCCCCccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHhhhcCCCCCCeeeEEeecCCCccccccCcccccccccccchhhhHHHHHHHHHHHHHhcCCCeeeEEeeCCCccH
Q 012532 262 KLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNA 341 (461)
Q Consensus 262 Kl~LYta~gGI~P~~~LPV~LDvGTnNe~LL~DplYlGlr~~R~~geeY~~fvdEfv~av~~~fGp~~lIqfEDF~~~nA 341 (461)
|++|||+||||||++|||||||+|||||+||+||+||||||+|++|++||+|+||||++|+++|||+++||||||+++||
T Consensus 161 Kl~Ly~~~aGIdP~~~lPI~LD~GTnn~~LL~DplYlG~r~~Rv~g~eyd~fvdefv~av~~~fGp~~~I~~EDf~~~~a 240 (555)
T 1gq2_A 161 KLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFANANA 240 (555)
T ss_dssp HHHHHHHTTCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCTHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHH
T ss_pred HHHHhHhccCCChhheeeeEeecCCCchhhcCCCccCCcCCCCCchHHHHHHHHHHHHHHHHhhCCCcEEeecccCCccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCceeccCcchHHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcE
Q 012532 342 FDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKI 421 (461)
Q Consensus 342 f~lL~rYr~~~~~FNDDIQGTaaV~LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i 421 (461)
|+||+|||++||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+.+|+++ |+|+|||+++|
T Consensus 241 f~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAg~gia~ll~~~~~~~-G~~~eeA~~~i 319 (555)
T 1gq2_A 241 FRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVMAMQKE-GVSKEEAIKRI 319 (555)
T ss_dssp HHHHHHHTTTSEEEETTTHHHHHHHHHHHHHHHHHHTSCGGGCCEEEECCSHHHHHHHHHHHHHHHHH-TCCHHHHHTTE
T ss_pred HHHHHHHhccCCEecCccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHc-CCChHHHhCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999985 99999999999
Q ss_pred EEEcCCCccccCCCcCCchhchhcccccCCCCCHHHHhc
Q 012532 422 WLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVN 460 (461)
Q Consensus 422 ~lvDs~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~ 460 (461)
||||++|||+++|. +|+++|++||+++++.++|+|||+
T Consensus 320 ~~~D~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~ 357 (555)
T 1gq2_A 320 WMVDSKGLIVKGRA-SLTPEKEHFAHEHCEMKNLEDIVK 357 (555)
T ss_dssp EEEETTEECBTTCS-SCCTTGGGGCBSCCCCCCHHHHHH
T ss_pred EEEECCCeeeCCCC-CchHHHHHHHhhcCCCCCHHHHHh
Confidence 99999999999996 599999999998877889999997
No 2
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=100.00 E-value=3.3e-141 Score=1116.77 Aligned_cols=358 Identities=51% Similarity=0.938 Sum_probs=352.7
Q ss_pred ccccccccCcCCCcCCCCCHHHHhhcccCCCCCCccccHHHHHHHHHHHhhcCCCchhHHHHHHHHHhhhhhhHHHHhhh
Q 012532 102 ASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLID 181 (461)
Q Consensus 102 ~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~R~~~~~~~~~~~l~Ky~~L~~L~~rNe~LFY~ll~~ 181 (461)
.+|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|++.||++++++|+||+||++||++||+|||||+++
T Consensus 3 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~ 82 (564)
T 1pj3_A 3 EKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKYIYIMGIQERNEKLFYRILQD 82 (564)
T ss_dssp CCSTHHHHSTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHCCSHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CchHHHhCCCcccCCCCCCHHHHHhCCCCcCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhhcccceeehhhhhh
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCceEEEEecCceeeccCCCCCCccccchh
Q 012532 182 NVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVG 261 (461)
Q Consensus 182 ~~ee~lPIvYTPtVG~aC~~~s~i~r~p~GlYis~~d~g~i~~il~Nwp~~~v~viVVTDGerILGLGDlG~~GmgI~iG 261 (461)
|++|+|||+||||||++|++||+|||+|+|+|+|++|+++|+++|+|||.++|+|||||||||||||||+|++||+||||
T Consensus 83 ~~~e~lpivYTP~Vg~ac~~~s~i~~~p~g~ylsi~d~~~i~~~l~n~~~~~v~v~VVTDG~~ILGLGD~G~~gm~ipvG 162 (564)
T 1pj3_A 83 DIESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVG 162 (564)
T ss_dssp CHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHTTCSCSCCCEEEEECSSSCTTSCCCGGGGGHHHHH
T ss_pred CHHHhCCeeeCccHHHHHHHHHHHhcCcccccccccCHHHHHHHHHhCCCCCceEEEEEcccccccCCCCCCCcccceeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHhhhcCCCCCCeeeEEeecCCCccccccCcccccccccccchhhhHHHHHHHHHHHHHhcCCCeeeEEeeCCCccH
Q 012532 262 KLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNA 341 (461)
Q Consensus 262 Kl~LYta~gGI~P~~~LPV~LDvGTnNe~LL~DplYlGlr~~R~~geeY~~fvdEfv~av~~~fGp~~lIqfEDF~~~nA 341 (461)
|++|||+||||||++|||||||+|||||+||+||+||||||+|++|++||+|+||||++|+++|||+++||||||+++||
T Consensus 163 Kl~Ly~~~aGIdP~~~lPI~lDvgTnn~~LL~DPlYlG~r~~Rv~g~eYd~fvdefv~av~~~fG~~~~I~~EDf~~~~a 242 (564)
T 1pj3_A 163 KLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQFEDFGNHNA 242 (564)
T ss_dssp HHHHHHHHHCCCGGGEEEEEEESCCCCTTGGGCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHH
T ss_pred HHHHHHhccCCChhheeeeEeecCcCchhhccCCcccCcCCCCCchhhHHHHHHHHHHHHHHHcCCCcEEeehhcCCccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCceeccCcchHHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcE
Q 012532 342 FDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKI 421 (461)
Q Consensus 342 f~lL~rYr~~~~~FNDDIQGTaaV~LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i 421 (461)
|+||+|||++||||||||||||+|+|||||||+|++|++|+||||||+|||+||+|||+||+.+|+++ |+|+|||+++|
T Consensus 243 f~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~-Gl~~eeA~~~i 321 (564)
T 1pj3_A 243 FRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAALGIANLIVMSMVEN-GLSEQEAQKKI 321 (564)
T ss_dssp HHHHHHHTTTSSEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHHT-TCCHHHHHHTE
T ss_pred HHHHHHhccCCCEeCCCCchHHHHHHHHHHHHHHHhCCcHhHcEEEEeCCCHHHHHHHHHHHHHHHHc-CCChHHhhCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999985 99999999999
Q ss_pred EEEcCCCccccCCCcCCchhchhcccccCCC--CCHHHHhc
Q 012532 422 WLVDSKGLIVSSRLESLQHFKKPWAHEHEPV--KELVDAVN 460 (461)
Q Consensus 422 ~lvDs~GLi~~~R~~~l~~~k~~fA~~~~~~--~~L~eaV~ 460 (461)
||||++|||+++|.++|+++|++||+++++. ++|+|||+
T Consensus 322 ~~~D~~Gli~~~r~~~l~~~k~~~A~~~~~~~~~~L~eav~ 362 (564)
T 1pj3_A 322 WMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDTFEDAVN 362 (564)
T ss_dssp EEEETTEECBTTCSSCCCTTTGGGCBCCCSSCCSSHHHHHH
T ss_pred EEEeCCCeEECCCcccchHHHHHHHHhcCccccCCHHHHHh
Confidence 9999999999999435999999999988877 89999997
No 3
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=100.00 E-value=1.3e-140 Score=1115.91 Aligned_cols=361 Identities=47% Similarity=0.867 Sum_probs=354.9
Q ss_pred ccccccccccccCcCCCcCCCCCHHHHhhcccCCCCCCccccHHHHHHHHHHHhhcCCCchhHHHHHHHHHhhhhhhHHH
Q 012532 98 SVSVASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYK 177 (461)
Q Consensus 98 ~~~~~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~R~~~~~~~~~~~l~Ky~~L~~L~~rNe~LFY~ 177 (461)
..+..+|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|++.||++++++|+||+||++||++||+||||
T Consensus 33 ~~~~~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfyr 112 (605)
T 1o0s_A 33 VTPKKRSAELLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLREQPNDLARYIQLDGLQDRNEKLFYR 112 (605)
T ss_dssp CCCSCCHHHHHTCTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHCHHHHHH
T ss_pred cccCcchHHHhCCCcccCCCCCCHHHHHHCCCCcCCCCCcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHhhcccchhhhh
Confidence 44567999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhChhccCCcccchhhHHHHHHHhhhhcCCCcccccccCc--chHHHHHhcCCCCCceEEEEecCceeeccCCCCCCc
Q 012532 178 LLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDK--GKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHG 255 (461)
Q Consensus 178 ll~~~~ee~lPIvYTPtVG~aC~~~s~i~r~p~GlYis~~d~--g~i~~il~Nwp~~~v~viVVTDGerILGLGDlG~~G 255 (461)
|+++|++|+|||+||||||++|++||+|||+|+|+|||++|+ |+|+++++|||.++|+|||||||||||||||+|++|
T Consensus 113 ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~g~yis~~d~~~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g 192 (605)
T 1o0s_A 113 VVCDHVKELMPIVYTPTVGLACQNFGYIYRKPKGLYITINDNSVSKIYQILSNWHEEDVRAIVVTDGERILGLGDLGAYG 192 (605)
T ss_dssp HHHHTHHHHHHHHSTTHHHHHHHHHCSCCCCCCSEEEEGGGCSHHHHHHHHTTSSCSCCCEEEEECSSCBTTTBCCGGGG
T ss_pred hhhhCHHHhCCeeeCccHHHHHHHHHHHhcChHhhhccccCcccchHHHHHhcCCCCCceEEEEEccccceecCCCCCCc
Confidence 999999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred cccchhhhhhHhhhcCCCCCCeeeEEeecCCCccccccCcccccccccccchhhhHHHHHHHHHHHHHhcCCCeeeEEee
Q 012532 256 MGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFED 335 (461)
Q Consensus 256 mgI~iGKl~LYta~gGI~P~~~LPV~LDvGTnNe~LL~DplYlGlr~~R~~geeY~~fvdEfv~av~~~fGp~~lIqfED 335 (461)
|+|||||++|||+||||||++|||||||||||||+||+||+||||||+|++|++||+|+||||++|+++|||+++|||||
T Consensus 193 ~~ipvGKl~Ly~~~aGIdP~~~lPI~LDvGTnne~LL~DPlYlG~r~~Rv~g~~Yd~fvdefv~av~~~fGp~~~I~~ED 272 (605)
T 1o0s_A 193 IGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDYDTLLDNFMKACTKKYGQKTLIQFED 272 (605)
T ss_dssp GHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CcceeeHHHHHHhccCCChhheeeeEeccCCChhhhccCCcccCcCCCCCChHHHHHHHHHHHHHHHHHhCCCcEeeHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccHHHHHHHHcCCCceeccCcchHHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChh
Q 012532 336 FANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLE 415 (461)
Q Consensus 336 F~~~nAf~lL~rYr~~~~~FNDDIQGTaaV~LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~e 415 (461)
|+++|||+||+|||++||||||||||||+|+|||||||+|++|++|+||||||+|||+||+|||+||+.+|+++ |+|+|
T Consensus 273 f~~p~af~il~ryr~~ipvFnDDiqGTA~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~-Gl~~e 351 (605)
T 1o0s_A 273 FANPNAFRLLDKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMIVHQMQNE-GISKE 351 (605)
T ss_dssp CCHHHHHHHHHHHTTTSEEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHTT-TCCHH
T ss_pred cCCccHHHHHHHhccCCCeeCcccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHc-CCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999884 99999
Q ss_pred hhcCcEEEEcCCCccccCCCcCCchhchhcccccCCCCCHHHHhc
Q 012532 416 ETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVN 460 (461)
Q Consensus 416 eAr~~i~lvDs~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~eaV~ 460 (461)
||+++|||||++|||+++|. +|+++|++||+++++.++|+|||+
T Consensus 352 eA~~~i~~vD~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~ 395 (605)
T 1o0s_A 352 EACNRIYLMDIDGLVTKNRK-EMNPRHVQFAKDMPETTSILEVIR 395 (605)
T ss_dssp HHHHTEEEEETTEECBTTCS-SCCGGGTTTCBSSCCCCCHHHHHH
T ss_pred hhhCeEEEEECCCceeCCCC-CchHHHHHHHhhcCCCCCHHHHHh
Confidence 99999999999999999996 599999999998877889999997
No 4
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=100.00 E-value=3e-72 Score=582.54 Aligned_cols=228 Identities=30% Similarity=0.440 Sum_probs=199.9
Q ss_pred hhccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCceEEEEecCceeeccCCCCC-Cccccchh
Q 012532 183 VEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGC-HGMGIPVG 261 (461)
Q Consensus 183 ~ee~lPIvYTPtVG~aC~~~s~i~r~p~GlYis~~d~g~i~~il~Nwp~~~v~viVVTDGerILGLGDlG~-~GmgI~iG 261 (461)
-.+.|||+||||||++|++|+ +|+++++++..+| ++|||||||||||||||+|+ +|||||+|
T Consensus 57 ~~~dLslaYTPgVa~~c~~i~-------------~dp~~~~~yt~kg----n~VaVVTDG~aILGLGDiG~~agmpImeG 119 (487)
T 3nv9_A 57 GFNWFNAYYTPGVSRISTNIR-------------DNNDSSLFYSLRG----NFVGVVSDSTRVLGDGDVTPPGGLGVMEG 119 (487)
T ss_dssp SGGGHHHHSTTTHHHHHHHHH-------------HCGGGHHHHSGGG----GEEEEEECSSSBGGGBCCCGGGGHHHHHH
T ss_pred CHHHCeeeeCcchHHHHHHHH-------------hChHHHhhhcccC----CEEEEEEcCceeeeccccccccCCchhhh
Confidence 345699999999999999985 4566777766666 49999999999999999999 59999999
Q ss_pred hhhhHhhhcCCCCCCeeeEEeecCCCccccccCcccccccccccchhhhHHHHHHHHHHHHHhcCCCeeeEEeeCCCccH
Q 012532 262 KLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNA 341 (461)
Q Consensus 262 Kl~LYta~gGI~P~~~LPV~LDvGTnNe~LL~DplYlGlr~~R~~geeY~~fvdEfv~av~~~fGp~~lIqfEDF~~~nA 341 (461)
|++|||+||||| |||||||+||+| +++|| |+|+ |||+++.++||. ||||||+++||
T Consensus 120 Kl~Lyk~~aGId---~lPI~LD~gt~~--~~~d~---------------defv-e~v~~~~P~fG~---InlEDf~ap~a 175 (487)
T 3nv9_A 120 KALLMKYLGGID---AVPICIDSKNKE--GKNDP---------------DAVI-EFVQRIQHTFGA---INLEDISQPNC 175 (487)
T ss_dssp HHHHHHHHHCCE---EEEEECCCBCTT--SCBCH---------------HHHH-HHHHHHGGGCSE---EEECSCCTTHH
T ss_pred HHHHHHhcCCCc---eeeeEEeCCCcc--ccCCH---------------HHHH-HHHHHhCCCCCe---ecHhhcCCchH
Confidence 999999999999 999999999765 46664 4444 566677777766 99999999999
Q ss_pred HHHHHHHcC--CCceeccCcchHHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcC
Q 012532 342 FDLLEKYGT--THLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRK 419 (461)
Q Consensus 342 f~lL~rYr~--~~~~FNDDIQGTaaV~LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~ 419 (461)
|++|+|||+ +||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+. .|+++ +
T Consensus 176 f~il~ryr~~~~ipvFnDD~qGTA~V~lAgllnAlki~gk~l~d~riV~~GAGaAGigia~ll~~-----~G~~~----~ 246 (487)
T 3nv9_A 176 YKILDVLRESCDIPVWHDDQQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSSNTTCLRLIVT-----AGADP----K 246 (487)
T ss_dssp HHHHHHHHHHCSSCEEETTTHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSHHHHHHHHHHHH-----TTCCG----G
T ss_pred HHHHHHHHhhccCCccccccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHH-----cCCCc----c
Confidence 999999998 799999999999999999999999999999999999999999999999999974 49985 8
Q ss_pred cEEEEcCCCccccCCCcCCc-----hhchhcccccC--CCCCHHHHhcC
Q 012532 420 KIWLVDSKGLIVSSRLESLQ-----HFKKPWAHEHE--PVKELVDAVNV 461 (461)
Q Consensus 420 ~i~lvDs~GLi~~~R~~~l~-----~~k~~fA~~~~--~~~~L~eaV~~ 461 (461)
+|||||++|||+++|.+ |+ ++|.+||++++ +..+|+|||+.
T Consensus 247 ~i~l~D~~Gli~~~R~~-l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~ 294 (487)
T 3nv9_A 247 KIVMFDSKGSLHNGRED-IKKDTRFYRKWEICETTNPSKFGSIAEACVG 294 (487)
T ss_dssp GEEEEETTEECCTTCHH-HHHCGGGHHHHHHHHHSCTTCCCSHHHHHTT
T ss_pred cEEEEeccccccCCcch-hhhhcccHHHHHHHHhcccccCCCHHHHHhc
Confidence 99999999999999954 63 46678888653 46799999973
No 5
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=100.00 E-value=8.5e-67 Score=534.26 Aligned_cols=228 Identities=28% Similarity=0.410 Sum_probs=203.2
Q ss_pred hhHHHHhhhChhccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCceEEEEecCceeeccCCCC
Q 012532 173 KLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLG 252 (461)
Q Consensus 173 ~LFY~ll~~~~ee~lPIvYTPtVG~aC~~~s~i~r~p~GlYis~~d~g~i~~il~Nwp~~~v~viVVTDGerILGLGDlG 252 (461)
.+++++.+++. |+|||+||||||++|++|+ ++| ++++ +|+.++++|+|||||+|||||||+|
T Consensus 23 ~~~~~~~~~~~-~~l~i~YtP~V~~~c~~i~---~~p----------~~v~----~~t~~~~~V~VvTdG~~iLGLGD~G 84 (398)
T 2a9f_A 23 EVQPKVDIKTK-HDLSIAYTPGVASVSSAIA---KDK----------TLAY----DLTTKKNTVAVISDGTAVLGLGDIG 84 (398)
T ss_dssp EEEESSCCSSH-HHHHHHSTTTTHHHHHHHH---HCG----------GGHH----HHSGGGTEEEEEECSSSCTTSCCCC
T ss_pred EEEEecccCCH-HHCeEEECchHHHHHHHHH---hCH----------HHHH----HhcccCCEEEEEECCccccCCCCcc
Confidence 34556666664 5589999999999999986 344 4443 6899999999999999999999999
Q ss_pred CC-ccccchhhhhhHhhhcCCCCCCeeeEEeecCCCccccccCcccccccccccchhhhHHHHHHHHHHHHHhcCCC-ee
Q 012532 253 CH-GMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGER-IL 330 (461)
Q Consensus 253 ~~-GmgI~iGKl~LYta~gGI~P~~~LPV~LDvGTnNe~LL~DplYlGlr~~R~~geeY~~fvdEfv~av~~~fGp~-~l 330 (461)
++ ||+||+||+.||++||||| |+|||||||| +||||++|+..| |. ..
T Consensus 85 ~~aG~pI~eGK~~Lf~~~agid---~~pi~Ldv~~---------------------------~dEfv~~v~~~~-p~F~~ 133 (398)
T 2a9f_A 85 PEAAMPVMEGKAALFKAFAGVD---AIPIVLDTKD---------------------------TEEIISIVKALA-PTFGG 133 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCE---EEEEECCCCC---------------------------HHHHHHHHHHHG-GGCSE
T ss_pred cccCCcchhCHHHHHHhccCCc---eeeeEeCCCC---------------------------HHHHHHHHHHcC-CceeE
Confidence 98 9999999999999999999 9999999996 799999999999 88 89
Q ss_pred eEEeeCCCccHHHHHHHHcCC--CceeccCcchHHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHH
Q 012532 331 IQFEDFANHNAFDLLEKYGTT--HLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISK 408 (461)
Q Consensus 331 IqfEDF~~~nAf~lL~rYr~~--~~~FNDDIQGTaaV~LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~ 408 (461)
||||||+++|||++|+|||++ +|||||||||||+|+|||++||+|++|++++|+||||+|||+||+|||++++.+
T Consensus 134 I~lED~~~p~~f~il~~~r~~~~ipvf~DDiqGTa~V~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~--- 210 (398)
T 2a9f_A 134 INLEDISAPRCFEIEQRLIKECHIPVFHDDQHGTAIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAA--- 210 (398)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHH---
T ss_pred eccccCCChHHHHHHHHhhhcCCcceecchhhhHHHHHHHHHHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHc---
Confidence 999999999999999999985 999999999999999999999999999999999999999999999999999875
Q ss_pred hCCCChhhhcCcEEEEcCCCccccCCCcCCchhchhcccccCC---CCCHHHHhc
Q 012532 409 QTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEP---VKELVDAVN 460 (461)
Q Consensus 409 ~~Gls~eeAr~~i~lvDs~GLi~~~R~~~l~~~k~~fA~~~~~---~~~L~eaV~ 460 (461)
|. ++|||+|++|||+++|.++|+++|++||++.++ ..+|+|+|+
T Consensus 211 --Ga------~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~ 257 (398)
T 2a9f_A 211 --GA------TKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALE 257 (398)
T ss_dssp --TC------CEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHH
T ss_pred --CC------CeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhc
Confidence 64 799999999999999933599999999997553 467999986
No 6
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=100.00 E-value=2.9e-64 Score=514.48 Aligned_cols=229 Identities=26% Similarity=0.408 Sum_probs=208.6
Q ss_pred hhHHHHhhhChhccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCceEEEEecCceeeccCCCC
Q 012532 173 KLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLG 252 (461)
Q Consensus 173 ~LFY~ll~~~~ee~lPIvYTPtVG~aC~~~s~i~r~p~GlYis~~d~g~i~~il~Nwp~~~v~viVVTDGerILGLGDlG 252 (461)
..++++.+++.|+ |||+||||||++|++|+ ++|.+ ++ +|+.++++|+|||||+|||||||+|
T Consensus 27 ~~~~~~~~~~~~~-l~i~YtP~V~~~c~~~~---~~p~~----------v~----~~t~~~~~V~VvTdg~~vLGlGD~G 88 (388)
T 1vl6_A 27 RTALPVEKVDRET-LSLLYTPGVADVARACA---EDPEK----------TY----VYTSRWNTVAVVSDGSAVLGLGNIG 88 (388)
T ss_dssp EEECSCSCCCHHH-HHHHSTTTHHHHHHHHH---HCGGG----------HH----HHSGGGGEEEEEECSTTBTTTBSCC
T ss_pred EEEEeeecCCHHH-CeEEECchHHHHHHHHH---hCHHH----------HH----hhcccCCeEEEEECCccccCCCccc
Confidence 4667778888766 89999999999999986 45554 43 5899999999999999999999999
Q ss_pred CC-ccccchhhhhhHhhhcCCCCCCeeeEEeecCCCccccccCcccccccccccchhhhHHHHHHHHHHHHHhcCCC-ee
Q 012532 253 CH-GMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGER-IL 330 (461)
Q Consensus 253 ~~-GmgI~iGKl~LYta~gGI~P~~~LPV~LDvGTnNe~LL~DplYlGlr~~R~~geeY~~fvdEfv~av~~~fGp~-~l 330 (461)
++ ||+||+||+.||++||||| |+|||||+|| +||||++|++.| |. ..
T Consensus 89 ~~ag~pI~egK~~Lf~~~agid---~~pi~ldv~~---------------------------~dE~v~~vk~~~-p~f~~ 137 (388)
T 1vl6_A 89 PYGALPVMEGKAFLFKAFADID---AFPICLSESE---------------------------EEKIISIVKSLE-PSFGG 137 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCE---EEEEECSCCC---------------------------HHHHHHHHHHTG-GGCSE
T ss_pred cccCCcchhCHHHHHHhccCCc---eEeEEeCCCC---------------------------HHHHHHHHHHcC-CcceE
Confidence 97 9999999999999999999 9999999996 799999999999 87 88
Q ss_pred eEEeeCCCccHHHHHHHHcC--CCceeccCcchHHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHH
Q 012532 331 IQFEDFANHNAFDLLEKYGT--THLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISK 408 (461)
Q Consensus 331 IqfEDF~~~nAf~lL~rYr~--~~~~FNDDIQGTaaV~LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~ 408 (461)
||||||+++|||++|+|||+ +||||||||||||+|++||+++|++++|++++|+||||+|||+||++||++++..
T Consensus 138 i~lED~~~p~af~il~r~r~~~~Ipvf~DDiqGTasV~lAal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~--- 214 (388)
T 1vl6_A 138 INLEDIGAPKCFRILQRLSEEMNIPVFHDDQQGTAVVVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDL--- 214 (388)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHH---
T ss_pred eCHhhcCCHHHHHHHHHhhhhcCcceeccccccHHHHHHHHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhC---
Confidence 99999999999999999997 5999999999999999999999999999999999999999999999999999864
Q ss_pred hCCCChhhhcCcEEEEcCCCccccCCCcC-CchhchhcccccCC---CCCHHHHhcC
Q 012532 409 QTNMPLEETRKKIWLVDSKGLIVSSRLES-LQHFKKPWAHEHEP---VKELVDAVNV 461 (461)
Q Consensus 409 ~~Gls~eeAr~~i~lvDs~GLi~~~R~~~-l~~~k~~fA~~~~~---~~~L~eaV~~ 461 (461)
| .++||++|++|||+.+|.+. |+++|++||++.++ ..+|.|+|+.
T Consensus 215 --G------~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~ 263 (388)
T 1vl6_A 215 --G------VKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEG 263 (388)
T ss_dssp --T------CCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTT
T ss_pred --C------CCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHcc
Confidence 6 37999999999999999643 99999999997553 4689999863
No 7
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=100.00 E-value=9.8e-48 Score=397.93 Aligned_cols=226 Identities=31% Similarity=0.519 Sum_probs=197.6
Q ss_pred HHHHhhhChhccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCceEEEEecCceeeccCCCCCC
Q 012532 175 FYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCH 254 (461)
Q Consensus 175 FY~ll~~~~ee~lPIvYTPtVG~aC~~~s~i~r~p~GlYis~~d~g~i~~il~Nwp~~~v~viVVTDGerILGLGDlG~~ 254 (461)
++++.+++. |+|||+||||||++|++|++ |++++++ ||.++++++|||||+|||||||+|.+
T Consensus 23 ~~~~~~~~~-~~l~~~YtP~v~~~c~~~~~-------------~~~~~~~----~~~~~~~v~vvtdgt~ilGlG~iG~h 84 (439)
T 2dvm_A 23 IPKVSLESR-EELTLAYTPGVAEPCKEIAR-------------DPGKVYE----YTSKGNLVAVVSDGSRILGLGNIGPL 84 (439)
T ss_dssp EESSCCCSH-HHHHHHSTTTTHHHHHHHHH-------------CGGGHHH----HSSGGGEEEEEECSTTBTTTBCCCHH
T ss_pred EEeeccCCH-HHCeeEECchhHHHHHHHHH-------------CHHHHHh----hcccCcEEEEEECCCeEecccceecc
Confidence 445556655 45899999999999999973 6777765 88889999999999999999999997
Q ss_pred -ccccchhhhhhHhhhcCCCCCCeeeEEeecCCCccccccCcccccccccccchhhhHHHHHHHHHHHHHhcCCC-eeeE
Q 012532 255 -GMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGER-ILIQ 332 (461)
Q Consensus 255 -GmgI~iGKl~LYta~gGI~P~~~LPV~LDvGTnNe~LL~DplYlGlr~~R~~geeY~~fvdEfv~av~~~fGp~-~lIq 332 (461)
++|+++||++||++||||| ++|++||+. | .|||+++|+..+ |+ ..||
T Consensus 85 S~sPvmh~ka~lf~~~gGid---~~yi~ldv~--------d-------------------~de~~~~v~~l~-~~f~Gin 133 (439)
T 2dvm_A 85 AGLPVMEGKALLFKRFGGVD---AFPIMIKEQ--------E-------------------PNKFIDIVKAIA-PTFGGIN 133 (439)
T ss_dssp HHHHHHHHHHHHHHHHHCCE---EEEEECSCC--------S-------------------HHHHHHHHHHTG-GGCSEEE
T ss_pred ccCHHHHHHHHHHHHhCCCC---CeeeeeecC--------C-------------------HHHHHHHHHHhC-ccCcEEE
Confidence 8999999999999999999 999999982 1 588888888766 55 5699
Q ss_pred EeeCCCccHHHHHHHHcC--CCceeccCcchHHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhC
Q 012532 333 FEDFANHNAFDLLEKYGT--THLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQT 410 (461)
Q Consensus 333 fEDF~~~nAf~lL~rYr~--~~~~FNDDIQGTaaV~LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~ 410 (461)
||||+.|+||++|++|++ ++|+||||+||||++.++|+++|++.+|++++++|+||+|||+||.+||.+|...
T Consensus 134 vED~T~P~k~~il~~l~~avNt~vf~dD~~gtgntd~aG~~~AL~~~g~~l~~~rvlvlGAGgAg~aia~~L~~~----- 208 (439)
T 2dvm_A 134 LEDIASPKCFYILERLREELDIPVFHDDQQGTAAVVLAGLLNALKVVGKKISEITLALFGAGAAGFATLRILTEA----- 208 (439)
T ss_dssp ECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEECCSHHHHHHHHHHHHT-----
T ss_pred EEeCCCchHHHHHHHHHHhcCEEEEeCCCcEEeehHHHHHHHHHHHhCCCccCCEEEEECccHHHHHHHHHHHHc-----
Confidence 999999999999999997 6999999999999999999999999999999999999999999999999999753
Q ss_pred CCChhhhcCcEEEEc----CCCccccCCCcC---CchhchhcccccC---CCCCHHHHhc
Q 012532 411 NMPLEETRKKIWLVD----SKGLIVSSRLES---LQHFKKPWAHEHE---PVKELVDAVN 460 (461)
Q Consensus 411 Gls~eeAr~~i~lvD----s~GLi~~~R~~~---l~~~k~~fA~~~~---~~~~L~eaV~ 460 (461)
|++ +++||++| ++||++++ +. +.++|++|++... ...+|.|+++
T Consensus 209 G~~----~~~I~vvd~~~~R~G~~~~a--~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l~ 262 (439)
T 2dvm_A 209 GVK----PENVRVVELVNGKPRILTSD--LDLEKLFPYRGWLLKKTNGENIEGGPQEALK 262 (439)
T ss_dssp TCC----GGGEEEEEEETTEEEECCTT--SCHHHHSTTCHHHHTTSCTTCCCSSHHHHHT
T ss_pred CCC----cCeEEEEEccCCCcCccccc--cchhHHHHHHHHHhhccccccccccHHHHhc
Confidence 875 37899999 99999887 24 7888889987543 2567888875
No 8
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=97.55 E-value=0.00029 Score=73.42 Aligned_cols=105 Identities=10% Similarity=0.170 Sum_probs=77.7
Q ss_pred ccchhhhHHHHHHHHHHHHHhcCCCeeeEEeeCCCccHHHHH---------------------HHHc-------CCCcee
Q 012532 304 RAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFDLL---------------------EKYG-------TTHLVF 355 (461)
Q Consensus 304 R~~geeY~~fvdEfv~av~~~fGp~~lIqfEDF~~~nAf~lL---------------------~rYr-------~~~~~F 355 (461)
--+.|||+..+++.+.+ .-++|+.+| |-+..=...+- .||+ -.+|+|
T Consensus 111 g~~~~ey~~~~~~~~~~--~~~~p~~il---DdGgdl~~~~h~~~~~~~~~i~G~~EeTttGv~rl~~~~~~g~L~~Pvi 185 (435)
T 3gvp_A 111 GESEDDFWWCIDRCVNV--EGWQPNMIL---DDGGDLTHWIYKKYPNMFKKIKGIVEESVTGVHRLYQLSKAGKLCVPAM 185 (435)
T ss_dssp TCCHHHHHHHHHHHHCB--TTBCCSEEE---ESSSHHHHHHHHHCHHHHHTCCEEEECCHHHHHHHTCC--CCCCCSCEE
T ss_pred CCCHHHHHHHHHHHHhc--cCCCCcEEE---ecchHHHHHHHHHhHHHHhhcceeEeccchhHHHHHHHHHcCCCCCCEE
Confidence 34678898888887642 346787776 55554333222 3333 269999
Q ss_pred ----------ccCcchHHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEc
Q 012532 356 ----------NDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVD 425 (461)
Q Consensus 356 ----------NDDIQGTaaV~LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvD 425 (461)
.|++.||+-++++|+..+ ++..|.+.+++|+|+|..|.++|+.+... |. +++.+|
T Consensus 186 ~vnds~tK~~fDn~yGt~~s~~~gi~ra---t~~~L~GktV~ViG~G~IGk~vA~~Lra~-----Ga-------~Viv~D 250 (435)
T 3gvp_A 186 NVNDSVTKQKFDNLYCCRESILDGLKRT---TDMMFGGKQVVVCGYGEVGKGCCAALKAM-----GS-------IVYVTE 250 (435)
T ss_dssp ECTTCHHHHHHHTHHHHHHHHHHHHHHH---HCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEC
T ss_pred EecchhhhhhhhhhhhhHHHHHHHHHHh---hCceecCCEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEe
Confidence 899999999999999765 68999999999999999999999988542 53 477777
Q ss_pred CCC
Q 012532 426 SKG 428 (461)
Q Consensus 426 s~G 428 (461)
.+.
T Consensus 251 ~dp 253 (435)
T 3gvp_A 251 IDP 253 (435)
T ss_dssp SCH
T ss_pred CCh
Confidence 543
No 9
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=97.23 E-value=0.00051 Score=71.63 Aligned_cols=52 Identities=19% Similarity=0.236 Sum_probs=47.1
Q ss_pred CCCcee----------ccCcchHHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHH
Q 012532 350 TTHLVF----------NDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIAL 404 (461)
Q Consensus 350 ~~~~~F----------NDDIQGTaaV~LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~ 404 (461)
..+|+| .|++.||+-++++|++. .++..|.+.+++|+|.|..|.++|+.+..
T Consensus 171 L~iPVinvndsvtk~~~Dn~~Gt~~slldgi~r---atg~~L~GktVgIiG~G~IG~~vA~~Lka 232 (436)
T 3h9u_A 171 LTIPAMNVNDSVTKSKFDNLYGCRESLVDGIKR---ATDVMIAGKTACVCGYGDVGKGCAAALRG 232 (436)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHHH---HHCCCCTTCEEEEECCSHHHHHHHHHHHH
T ss_pred CCCceEeechhhhhhhhhccccchHHHHHHHHH---hcCCcccCCEEEEEeeCHHHHHHHHHHHH
Confidence 479999 88999999999999965 56999999999999999999999999854
No 10
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=96.59 E-value=0.0045 Score=62.97 Aligned_cols=153 Identities=18% Similarity=0.236 Sum_probs=89.7
Q ss_pred CcchHHHHHhcCCCCCceEEEEecCceeeccCCCCCC--ccccchhhhhhHhhhcCCCCCCeeeEEeecCCCccccccCc
Q 012532 218 DKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCH--GMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDE 295 (461)
Q Consensus 218 d~g~i~~il~Nwp~~~v~viVVTDGerILGLGDlG~~--GmgI~iGKl~LYta~gGI~P~~~LPV~LDvGTnNe~LL~Dp 295 (461)
++..+.++.++ +.+|+|.++++...|++|.+.. |+.|..+ ..+|. | +++|.+.+ |
T Consensus 26 tP~~v~~L~~~----G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~-~~~~~-a---------diil~vk~--------p 82 (401)
T 1x13_A 26 TPKTVEQLLKL----GFTVAVESGAGQLASFDDKAFVQAGAEIVEG-NSVWQ-S---------EIILKVNA--------P 82 (401)
T ss_dssp CHHHHHHHHHT----TCEEEEETTTTGGGTCCHHHHHHHTCEEECG-GGGGS-S---------SEEECSSC--------C
T ss_pred CHHHHHHHHHC----CCEEEEEECCCcccCCChHHHHHCCCEEecc-HHHhc-C---------CeEEEeCC--------C
Confidence 34456666554 4589999999999999998865 7888777 56665 1 56776542 2
Q ss_pred ccccccccccchhhhHHHHHHHHHHHHHhcCCCeeeEEeeCCCccHHHHHHHHc-CCCceecc-Cc------c----hHH
Q 012532 296 FYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYG-TTHLVFND-DI------Q----GTA 363 (461)
Q Consensus 296 lYlGlr~~R~~geeY~~fvdEfv~av~~~fGp~~lIqfEDF~~~nAf~lL~rYr-~~~~~FND-DI------Q----GTa 363 (461)
..+.+..+++ ...+|.+=..+. .-.+++..+ ..+.+|+- .+ | .+.
T Consensus 83 ------------------~~~~i~~l~~---~~~li~~~~~~~--d~~~~~al~~~gI~v~~~e~v~~~~~a~~l~~l~~ 139 (401)
T 1x13_A 83 ------------------LDDEIALLNP---GTTLVSFIWPAQ--NPELMQKLAERNVTVMAMDSVPRISRAQSLDALSS 139 (401)
T ss_dssp ------------------CHHHHTTCCT---TCEEEECCCGGG--CHHHHHHHHHTTCEEEEGGGCCCSGGGGGGCHHHH
T ss_pred ------------------CHHHHHHhcC---CCcEEEEecCCC--CHHHHHHHHHCCCEEEEeehhhhhhhhcccchHHH
Confidence 1233332221 112233322221 122333332 45666632 22 2 455
Q ss_pred HHHHHHHHHHHHH----hCC----------CCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCc
Q 012532 364 SVVLAGLISAMKF----LGG----------SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (461)
Q Consensus 364 aV~LAgllaAlrv----~g~----------~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GL 429 (461)
...+|| .+|++. .++ .+...+|+|+|+|.+|.++|+++... |. +++++|++.-
T Consensus 140 ~a~~ag-~~av~~~~~~~~~~~~~~~~~~g~l~g~~V~ViGaG~iG~~aa~~a~~~-----Ga-------~V~v~D~~~~ 206 (401)
T 1x13_A 140 MANIAG-YRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANSL-----GA-------IVRAFDTRPE 206 (401)
T ss_dssp HHHHHH-HHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCGG
T ss_pred HHHHHH-HHHHHHHHHhcccccCCceeeccCcCCCEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEcCCHH
Confidence 555555 333333 222 25689999999999999999887532 63 4888887653
No 11
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=96.04 E-value=0.009 Score=63.11 Aligned_cols=64 Identities=16% Similarity=0.255 Sum_probs=52.8
Q ss_pred CCCcee----------ccCcchHHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcC
Q 012532 350 TTHLVF----------NDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRK 419 (461)
Q Consensus 350 ~~~~~F----------NDDIQGTaaV~LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~ 419 (461)
-.+|+| .|++.||+-.++.|+. |.++..|.+.+++|.|+|..|.+||+.+... |.
T Consensus 225 L~iPvinvnDs~tK~~fDn~yGt~~sl~dgi~---r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa~-----GA------- 289 (488)
T 3ond_A 225 LLFPAINVNDSVTKSKFDNLYGCRHSLPDGLM---RATDVMIAGKVAVVAGYGDVGKGCAAALKQA-----GA------- 289 (488)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCceecccchhhhhHhhhhccccHHHHHHHH---HHcCCcccCCEEEEECCCHHHHHHHHHHHHC-----CC-------
Confidence 479999 6889999999999887 7889999999999999998888888877543 63
Q ss_pred cEEEEcCCC
Q 012532 420 KIWLVDSKG 428 (461)
Q Consensus 420 ~i~lvDs~G 428 (461)
+++++|.+.
T Consensus 290 ~Viv~D~~~ 298 (488)
T 3ond_A 290 RVIVTEIDP 298 (488)
T ss_dssp EEEEECSCH
T ss_pred EEEEEcCCH
Confidence 577777653
No 12
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=94.97 E-value=0.2 Score=52.06 Aligned_cols=120 Identities=21% Similarity=0.231 Sum_probs=90.9
Q ss_pred ccchhhhHHHHHHHHHHHHHhcCCCeeeEEeeCCCccH-HH-HHHHHc---CCC--cee----------ccCcchHHHHH
Q 012532 304 RAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNA-FD-LLEKYG---TTH--LVF----------NDDIQGTASVV 366 (461)
Q Consensus 304 R~~geeY~~fvdEfv~av~~~fGp~~lIqfEDF~~~nA-f~-lL~rYr---~~~--~~F----------NDDIQGTaaV~ 366 (461)
..+..|-..|...|++++.+.-||+.-|-=+|++..-. .. +.+.|+ ... .++ .+--.-||-=+
T Consensus 125 ~~s~~El~r~~r~f~~~l~~~iG~~~dipApDvgt~~~~m~~~~~~y~~~~g~~~~~~vTGkp~~~GGs~~r~~aTg~Gv 204 (424)
T 3k92_A 125 TMSFGELERLSRGYVRAISQIVGPTKDIPAPDVYTNSQIMAWMMDEYSRLREFDSPGFITGKPLVLGGSQGRETATAQGV 204 (424)
T ss_dssp GSCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGCSSCCGGGTCCTTTTTHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCCCccCCcCCCCHHHHHHHHHHHHHHhCCCCcceeecccccCCCcCCCcccHHHHH
Confidence 34566777889999999999999988888889887322 12 445663 211 122 22334588888
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCccccCC
Q 012532 367 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSR 434 (461)
Q Consensus 367 LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R 434 (461)
..++-.+++..|.+|++.||+|.|.|..|...|+++.+. |. +-+.+.|++|-|+...
T Consensus 205 ~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~aa~~l~e~-----Ga------kVVavsD~~G~iyd~~ 261 (424)
T 3k92_A 205 TICIEEAVKKKGIKLQNARIIIQGFGNAGSFLAKFMHDA-----GA------KVIGISDANGGLYNPD 261 (424)
T ss_dssp HHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHH-----TC------EEEEEECSSCEEECTT
T ss_pred HHHHHHHHHHcCCCcccCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC
Confidence 888999999999999999999999999999999998654 53 3457999999998754
No 13
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=93.94 E-value=0.35 Score=50.17 Aligned_cols=118 Identities=18% Similarity=0.167 Sum_probs=88.7
Q ss_pred cchhhhHHHHHHHHHHHHHhcCCCeeeEEeeCCCccH--HHHHHHHcC---CC--cee----------ccCcchHHHHHH
Q 012532 305 AIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNA--FDLLEKYGT---TH--LVF----------NDDIQGTASVVL 367 (461)
Q Consensus 305 ~~geeY~~fvdEfv~av~~~fGp~~lIqfEDF~~~nA--f~lL~rYr~---~~--~~F----------NDDIQGTaaV~L 367 (461)
.+..|-..|...|++++.+.-||+.-|-=+|++..-. --+.+.|+. .. .++ .+.-.-||-=+.
T Consensus 123 ~s~~El~r~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~ 202 (419)
T 3aoe_E 123 LSPQELERLVRRYTAELVGLIGPDSDILGPDLGADQQVMAWIMDTYSMTVGSTVPGVVTGKPHALGGSEGRDDAAGLGAL 202 (419)
T ss_dssp SCHHHHHHHHHHHHHHHTTTCBTTTEEEEEBTTBCHHHHHHHHHHHHHHHTSCCGGGBSSCCGGGTCCSSCSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeeeccchhcCCCCCCccchHHHHH
Confidence 4556778889999999999999999999999987522 124556631 11 122 122234776677
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEE-EEcCCCccccCC
Q 012532 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIW-LVDSKGLIVSSR 434 (461)
Q Consensus 368 AgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~-lvDs~GLi~~~R 434 (461)
-++-.+++..|.+|++.||+|.|.|..|...|+++.+. |. +++ +.|++|-|+...
T Consensus 203 ~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~~a~~L~~~-----Ga-------kVVavsD~~G~i~dp~ 258 (419)
T 3aoe_E 203 LVLEALAKRRGLDLRGARVVVQGLGQVGAAVALHAERL-----GM-------RVVAVATSMGGMYAPE 258 (419)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEEETTEEEECTT
T ss_pred HHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHHC-----CC-------EEEEEEcCCCeEECCC
Confidence 77888899999999999999999999999999988642 53 466 999999988764
No 14
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=93.73 E-value=0.81 Score=47.97 Aligned_cols=120 Identities=17% Similarity=0.119 Sum_probs=89.9
Q ss_pred ccchhhhHHHHHHHHHHHHHhcCCCeeeEEeeCCCccH-----HHHHHHHcCC-Ccee----------ccCcchHHHHHH
Q 012532 304 RAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNA-----FDLLEKYGTT-HLVF----------NDDIQGTASVVL 367 (461)
Q Consensus 304 R~~geeY~~fvdEfv~av~~~fGp~~lIqfEDF~~~nA-----f~lL~rYr~~-~~~F----------NDDIQGTaaV~L 367 (461)
..+..|-..|...||..+.+..||+.=|--.|+...-. +...++++.. -+|| .+.-.-||-=+.
T Consensus 140 ~~s~~El~R~~~~f~~eL~~~iG~d~dvpa~Dig~~~~em~~~~~~y~~~~~~~~~v~TGk~~~~GGs~~r~~aTg~Gv~ 219 (450)
T 4fcc_A 140 GKSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLV 219 (450)
T ss_dssp TCCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTCCSCCCSSCCGGGTCCTTTTTHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhhheecCCCCCCccceeecchhhhhhhhhhhhccCCCceeecCCCcccCCCCCCCCceeeeHH
Confidence 35677888899999999999999999999999976322 2233343332 2232 122334777778
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCccccCC
Q 012532 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSR 434 (461)
Q Consensus 368 AgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R 434 (461)
-++-.+++..+.+|++.||+|-|.|..|...|+.+.+. |. +=|-+-|++|-|+...
T Consensus 220 ~~~~~~~~~~~~~l~Gk~vaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~i~d~~ 275 (450)
T 4fcc_A 220 YFTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEF-----GA------RVITASDSSGTVVDES 275 (450)
T ss_dssp HHHHHHHHHTTCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEEETTEEEECTT
T ss_pred HHHHHHHHHcCCCcCCCEEEEeCCChHHHHHHHHHHhc-----CC------eEEEEecCCceEEeCC
Confidence 88889999999999999999999999999999998653 63 3466778888887653
No 15
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=93.70 E-value=0.38 Score=49.82 Aligned_cols=118 Identities=17% Similarity=0.187 Sum_probs=88.1
Q ss_pred cchhhhHHHHHHHHHHHHHhcCCCeeeEEeeCCCccH--HHHHHHHc---CCC---ceec----------cCcchHHHHH
Q 012532 305 AIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNA--FDLLEKYG---TTH---LVFN----------DDIQGTASVV 366 (461)
Q Consensus 305 ~~geeY~~fvdEfv~av~~~fGp~~lIqfEDF~~~nA--f~lL~rYr---~~~---~~FN----------DDIQGTaaV~ 366 (461)
.+..|-..|...|++++.+.-||+.-|-=+|++..-. --+.+.|+ ... .++- +.-.-||-=+
T Consensus 116 ~s~~el~r~~r~f~~~l~~~iG~~~dvpA~Dvgt~~~~m~~~~~~y~~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv 195 (421)
T 2yfq_A 116 LSERELEQLSRGWVRGLYKYLGDRIDIPAPDVNTNGQIMSWFVDEYVKLNGERMDIGTFTGKPVAFGGSEGRNEATGFGV 195 (421)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEEEEECTTCCHHHHHHHHHHHHHHTTTCCCGGGSCSCCGGGTCCTTCTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCCEEecCchhcCCCCCCCcchHHHH
Confidence 3556777889999999999999999999999997522 12555664 221 2221 1223466666
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEE-EEcCC-----CccccCC
Q 012532 367 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIW-LVDSK-----GLIVSSR 434 (461)
Q Consensus 367 LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~-lvDs~-----GLi~~~R 434 (461)
.-++-.+++..|.+|++.||+|.|.|..|...|++|.+. |. +++ +.|++ |-|+...
T Consensus 196 ~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~~~-----Ga-------kvVavsD~~~~~~~G~i~d~~ 257 (421)
T 2yfq_A 196 AVVVRESAKRFGIKMEDAKIAVQGFGNVGTFTVKNIERQ-----GG-------KVCAIAEWDRNEGNYALYNEN 257 (421)
T ss_dssp HHHHHHHHHHTTCCGGGSCEEEECCSHHHHHHHHHHHHT-----TC-------CEEECCBCCSSSCSBCCBCSS
T ss_pred HHHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHHC-----CC-------EEEEEEecCCCccceEEECCC
Confidence 667788889999999999999999999999999988653 63 355 89999 9988764
No 16
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=93.63 E-value=0.67 Score=48.69 Aligned_cols=119 Identities=19% Similarity=0.215 Sum_probs=87.1
Q ss_pred cchhhhHHHHHHHHHHHHHhcCCCeeeEEeeCCCccHH--HHHHHHc---CCCc-ee----------ccCcchHHHHHHH
Q 012532 305 AIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAF--DLLEKYG---TTHL-VF----------NDDIQGTASVVLA 368 (461)
Q Consensus 305 ~~geeY~~fvdEfv~av~~~fGp~~lIqfEDF~~~nAf--~lL~rYr---~~~~-~F----------NDDIQGTaaV~LA 368 (461)
.+..|...|...||..+.+-+||..=|-=+|++..-.. -+.+.|+ ...+ ++ ..--.-||-=+.-
T Consensus 145 ~s~~el~r~~r~f~~eL~~~iGp~~DvpApDvGt~~~em~w~~~~y~~~~~~~~g~vTGKp~~~GGs~~r~~aTg~Gv~~ 224 (456)
T 3r3j_A 145 KSENEILKFCQSFMTNLFRYIGPNTDVPAGDIGVGGREIGYLFGQYKKLKNSFEGVLTGKNIKWGGSNIRAEATGYGVVY 224 (456)
T ss_dssp CCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCCSCBSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCCCCHHHHHHHHHHHHhhcCcccceecCCcccccCCCCCCcccchHHHH
Confidence 45667788888899999888899999999999874321 1445554 2221 11 1112347777777
Q ss_pred HHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCccccCC
Q 012532 369 GLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSR 434 (461)
Q Consensus 369 gllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R 434 (461)
++-.+++..|.+|++.||+|-|.|..|...|+.+.+. |. +-+.+.|++|-|+...
T Consensus 225 ~~~~~~~~~g~~l~g~~VaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~iyd~~ 279 (456)
T 3r3j_A 225 FAENVLKDLNDNLENKKCLVSGSGNVAQYLVEKLIEK-----GA------IVLTMSDSNGYILEPN 279 (456)
T ss_dssp HHHHHHHTTTCCSTTCCEEEECCSHHHHHHHHHHHHH-----TC------CBCCEECSSCEEECTT
T ss_pred HHHHHHHHcCCCccCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC
Confidence 8888889889999999999999999999999998664 53 2345889998888753
No 17
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=93.42 E-value=0.77 Score=47.93 Aligned_cols=117 Identities=15% Similarity=0.181 Sum_probs=88.0
Q ss_pred cchhhhHHHHHHHHHHHHHhcCCCeeeEEeeCCCccHHH---HHHHHc---CCC--cee----------ccCcchHHHHH
Q 012532 305 AIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFD---LLEKYG---TTH--LVF----------NDDIQGTASVV 366 (461)
Q Consensus 305 ~~geeY~~fvdEfv~av~~~fGp~~lIqfEDF~~~nAf~---lL~rYr---~~~--~~F----------NDDIQGTaaV~ 366 (461)
.+..|-..|...|++++.+.-||..-|-=+|++.. +.. +.+.|+ ... .++ .+.-.-||-=+
T Consensus 140 ~s~~Eler~~r~f~~~l~~~iGp~~dvpA~DvGt~-~~~m~~~~~~y~~~~~~~~~g~vTGkp~~~GGs~~r~~aTg~Gv 218 (440)
T 3aog_A 140 LSPGELERLTRRYTSEIGILLGPDRDIPAPDVNTG-EREMAWMMDTYSMNVGRTVPGVVTGKPIALGGSLGRRDATGRGV 218 (440)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCC-HHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTCTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCC-HHHHHHHHHHHHHhhCCCCCCeEeccchhhCCCCCCCcchHHHH
Confidence 45567788899999999999999998999999874 222 455663 111 222 22223476666
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEE-EEcCCCccccCC
Q 012532 367 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIW-LVDSKGLIVSSR 434 (461)
Q Consensus 367 LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~-lvDs~GLi~~~R 434 (461)
.-++-.+++..|.+|++.||+|.|.|..|...|++|.+. |. ++. +.|++|-|....
T Consensus 219 ~~~~~~~~~~~g~~l~g~~vaVqGfGnVG~~~a~~L~e~-----Ga-------kvVavsD~~G~i~dp~ 275 (440)
T 3aog_A 219 FITAAAAAEKIGLQVEGARVAIQGFGNVGNAAARAFHDH-----GA-------RVVAVQDHTGTVYNEA 275 (440)
T ss_dssp HHHHHHHHHHHTCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEECSSCEEECTT
T ss_pred HHHHHHHHHhcCCCccCCEEEEeccCHHHHHHHHHHHHC-----CC-------EEEEEEcCCcEEECCC
Confidence 677788889999999999999999999999999988653 53 455 999999988764
No 18
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=93.24 E-value=0.15 Score=49.51 Aligned_cols=50 Identities=18% Similarity=0.220 Sum_probs=37.8
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 367 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 367 LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
-.|++.+++..+.++++.+++|+|||.+|.+++..+.. .|. ++|+++|+.
T Consensus 111 ~~G~~~~l~~~~~~l~~k~vlVlGaGG~g~aia~~L~~-----~G~------~~v~i~~R~ 160 (283)
T 3jyo_A 111 VSGFGRGMEEGLPNAKLDSVVQVGAGGVGNAVAYALVT-----HGV------QKLQVADLD 160 (283)
T ss_dssp HHHHHHHHHHHCTTCCCSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSS
T ss_pred HHHHHHHHHHhCcCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEECC
Confidence 35788888888889999999999999777777666643 264 357777653
No 19
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=93.20 E-value=0.14 Score=50.20 Aligned_cols=37 Identities=14% Similarity=0.244 Sum_probs=32.7
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHH
Q 012532 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIAL 404 (461)
Q Consensus 368 AgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~ 404 (461)
.|++.+|+..+.++++.+++|+|||.||.+|+..+..
T Consensus 107 ~G~~~~L~~~~~~~~~k~vlvlGaGGaaraia~~L~~ 143 (282)
T 3fbt_A 107 IGFGKMLSKFRVEIKNNICVVLGSGGAARAVLQYLKD 143 (282)
T ss_dssp HHHHHHHHHTTCCCTTSEEEEECSSTTHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCccCCEEEEECCcHHHHHHHHHHHH
Confidence 6888999888999999999999999888888877754
No 20
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=93.07 E-value=0.14 Score=49.77 Aligned_cols=49 Identities=20% Similarity=0.257 Sum_probs=37.5
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 367 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 367 LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
-.|++.+++..+.++++.+++|+|||.+|.+||..+.. .|. ++|+++++
T Consensus 110 ~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R 158 (281)
T 3o8q_A 110 GEGLVQDLLAQQVLLKGATILLIGAGGAARGVLKPLLD-----QQP------ASITVTNR 158 (281)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHT-----TCC------SEEEEEES
T ss_pred HHHHHHHHHHhCCCccCCEEEEECchHHHHHHHHHHHh-----cCC------CeEEEEEC
Confidence 36778888888899999999999999877777766643 264 35666665
No 21
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=93.06 E-value=0.16 Score=50.42 Aligned_cols=50 Identities=30% Similarity=0.414 Sum_probs=38.6
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 367 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 367 LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
-.|++.+++-.+.++++.++||+|||.+|.+||..+.. .|. ++|+++++.
T Consensus 138 ~~Gf~~~L~~~~~~l~gk~~lVlGaGG~g~aia~~L~~-----~Ga------~~V~i~nR~ 187 (315)
T 3tnl_A 138 GTGYMRALKEAGHDIIGKKMTICGAGGAATAICIQAAL-----DGV------KEISIFNRK 187 (315)
T ss_dssp HHHHHHHHHHTTCCCTTSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS
T ss_pred HHHHHHHHHHcCCCccCCEEEEECCChHHHHHHHHHHH-----CCC------CEEEEEECC
Confidence 45678888888899999999999999777777766643 364 468888775
No 22
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=92.97 E-value=0.16 Score=50.38 Aligned_cols=49 Identities=35% Similarity=0.485 Sum_probs=37.8
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 368 AgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.|++.+++-.+.++++.++||+|||.||.+||..+.. .|. ++|+++++.
T Consensus 133 ~Gf~~~L~~~~~~l~gk~~lVlGAGGaaraia~~L~~-----~G~------~~v~v~nRt 181 (312)
T 3t4e_A 133 TGHIRAIKESGFDMRGKTMVLLGAGGAATAIGAQAAI-----EGI------KEIKLFNRK 181 (312)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS
T ss_pred HHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----cCC------CEEEEEECC
Confidence 5677888888899999999999999887777776654 364 357777764
No 23
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=92.85 E-value=0.1 Score=50.88 Aligned_cols=57 Identities=25% Similarity=0.359 Sum_probs=41.9
Q ss_pred CceeccCcchHHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 352 HLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 352 ~~~FNDDIQGTaaV~LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
..=+|-| -.|++.+++..+.++++.+++|+|||.+|.+||..+.. .|. ++|++++++
T Consensus 94 l~G~NTD--------~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~ 150 (277)
T 3don_A 94 WIGYNTD--------GIGYVNGLKQIYEGIEDAYILILGAGGASKGIANELYK-----IVR------PTLTVANRT 150 (277)
T ss_dssp EEEECCH--------HHHHHHHHHHHSTTGGGCCEEEECCSHHHHHHHHHHHT-----TCC------SCCEEECSC
T ss_pred EEEECCh--------HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC
Confidence 4556666 34567788888899999999999999888888777653 364 357777664
No 24
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=92.69 E-value=0.15 Score=49.36 Aligned_cols=49 Identities=27% Similarity=0.357 Sum_probs=36.8
Q ss_pred HHHHHHH-HHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 367 LAGLISA-MKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 367 LAgllaA-lrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
..|++.+ ++..+.++++.+++|+|||.+|.++|..+.. .|. ++|+++++
T Consensus 103 ~~G~~~~lL~~~~~~l~~k~~lvlGaGg~~~aia~~L~~-----~G~------~~v~i~~R 152 (272)
T 3pwz_A 103 GIGLLRDIEENLGEPLRNRRVLLLGAGGAVRGALLPFLQ-----AGP------SELVIANR 152 (272)
T ss_dssp HHHHHHHHHTTSCCCCTTSEEEEECCSHHHHHHHHHHHH-----TCC------SEEEEECS
T ss_pred HHHHHHHHHHHcCCCccCCEEEEECccHHHHHHHHHHHH-----cCC------CEEEEEeC
Confidence 3578888 8878889999999999999777777766654 254 35666655
No 25
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=92.57 E-value=0.16 Score=49.29 Aligned_cols=49 Identities=24% Similarity=0.318 Sum_probs=37.9
Q ss_pred HHHHHHHHHhC-CCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 368 AGLISAMKFLG-GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 368 AgllaAlrv~g-~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.|++.+++..+ .+++..+++|+|||.+|.++|..+.. .|. ++|+++|+.
T Consensus 125 ~G~~~~l~~~~~~~l~~~~vlVlGaGg~g~aia~~L~~-----~G~------~~V~v~nR~ 174 (297)
T 2egg_A 125 LGYVQALEEEMNITLDGKRILVIGAGGGARGIYFSLLS-----TAA------ERIDMANRT 174 (297)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC------SEEEEECSS
T ss_pred HHHHHHHHHhCCCCCCCCEEEEECcHHHHHHHHHHHHH-----CCC------CEEEEEeCC
Confidence 67788888777 78999999999999888888777653 254 357777763
No 26
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=92.09 E-value=0.25 Score=47.88 Aligned_cols=48 Identities=33% Similarity=0.436 Sum_probs=37.9
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 368 AgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
.|++.+++-.|.+++..++|++|||-|+-+|+-.+... |. ++|+++++
T Consensus 110 ~Gf~~~L~~~g~~~~~~~~lilGaGGaarai~~aL~~~-----g~------~~i~i~nR 157 (269)
T 3tum_A 110 AGFLGAAHKHGFEPAGKRALVIGCGGVGSAIAYALAEA-----GI------ASITLCDP 157 (269)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC------SEEEEECS
T ss_pred HHHHHHHHHhCCCcccCeEEEEecHHHHHHHHHHHHHh-----CC------CeEEEeCC
Confidence 35678888889999999999999999999988776543 54 45777765
No 27
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=92.09 E-value=1.1 Score=46.45 Aligned_cols=117 Identities=20% Similarity=0.208 Sum_probs=85.5
Q ss_pred cchhhhHHHHHHHHHHHHHhcCCCeeeEEeeCCCccHHH---HHHHHc---CC--CceeccC----------cchHHHHH
Q 012532 305 AIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFD---LLEKYG---TT--HLVFNDD----------IQGTASVV 366 (461)
Q Consensus 305 ~~geeY~~fvdEfv~av~~~fGp~~lIqfEDF~~~nAf~---lL~rYr---~~--~~~FNDD----------IQGTaaV~ 366 (461)
.+.+|-..|...|++++.+.-||..-|-=+|++.. +.. +.+.|+ +. ..++.-+ -.-||-=+
T Consensus 115 ~s~~e~~r~~r~f~~~l~~~iG~~~dvpA~D~Gt~-~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv 193 (421)
T 1v9l_A 115 LSQRELEELSRGYARAIAPLIGDVVDIPAPDVGTN-AQIMAWMVDEYSKIKGYNVPGVFTSKPPELWGNPVREYATGFGV 193 (421)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEEEECCTTCC-HHHHHHHHHHHHHHHTSCCGGGSCSCCSSSSCCGGGGGHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCCC-HHHHHHHHHHHHHHhCCCCCCeEeccchhhCCCCCcccchHHHH
Confidence 34567788899999999999999999999999983 222 335552 11 1222221 12365555
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEE-EEcCCCccccCC
Q 012532 367 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIW-LVDSKGLIVSSR 434 (461)
Q Consensus 367 LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~-lvDs~GLi~~~R 434 (461)
.-++-.+++..|.+|++.+|+|.|.|..|...|+++.+ .|. +++ +.|++|-|....
T Consensus 194 ~~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~aa~~L~e-----~Ga-------kVVavsD~~G~i~dp~ 250 (421)
T 1v9l_A 194 AVATREMAKKLWGGIEGKTVAIQGMGNVGRWTAYWLEK-----MGA-------KVIAVSDINGVAYRKE 250 (421)
T ss_dssp HHHHHHHHHHHHSCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEECSSCEEECTT
T ss_pred HHHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEECCCcEEECCC
Confidence 66777888889999999999999999999999988754 253 455 999999988754
No 28
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=91.73 E-value=1.6 Score=45.18 Aligned_cols=119 Identities=21% Similarity=0.171 Sum_probs=85.8
Q ss_pred cchhhhHHHHHHHHHHHHHhcCCCeeeEEeeCCCccH--HHHHHHHc---CC--CceeccC----------cchHHHHHH
Q 012532 305 AIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNA--FDLLEKYG---TT--HLVFNDD----------IQGTASVVL 367 (461)
Q Consensus 305 ~~geeY~~fvdEfv~av~~~fGp~~lIqfEDF~~~nA--f~lL~rYr---~~--~~~FNDD----------IQGTaaV~L 367 (461)
.+.+|-..|...|++++.+.-||..-|-=+|++..-. --+.+.|+ +. ..++--+ -.-||-=+.
T Consensus 114 ~s~~e~~r~~r~f~~~l~~~ig~~~dvpa~D~gt~~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~ 193 (415)
T 2tmg_A 114 LSRRELERLSRRFFREIQVIIGPYNDIPAPDVNTNADVIAWYMDEYEMNVGHTVLGIVTGKPVELGGSKGREEATGRGVK 193 (415)
T ss_dssp SCHHHHHHHHHHHHHHTGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHSSCCCCSCSSCCGGGTCCTTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHhCCCcEEeCCCCCCCHHHHHHHHHHHHHhhCCCCCCeEecCchhhCCCCCcCcchHHHHH
Confidence 3456678889999999999999998898999987521 11444552 21 1223221 223666666
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEE-EEcCCCccccCC
Q 012532 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIW-LVDSKGLIVSSR 434 (461)
Q Consensus 368 AgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~-lvDs~GLi~~~R 434 (461)
-++-.+++..|.++++.+|+|.|.|..|...|++|.+. .|. ++. +.|++|-|....
T Consensus 194 ~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~e~----~Ga-------kvVavsD~~G~i~dp~ 250 (415)
T 2tmg_A 194 VCAGLAMDVLGIDPKKATVAVQGFGNVGQFAALLISQE----LGS-------KVVAVSDSRGGIYNPE 250 (415)
T ss_dssp HHHHHHHHHTTCCTTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEEECSSCEEECTT
T ss_pred HHHHHHHHHcCCCcCCCEEEEECCcHHHHHHHHHHHHh----cCC-------EEEEEEeCCCeEECCC
Confidence 67778888899999999999999999999999988651 253 354 899999988764
No 29
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=91.71 E-value=0.22 Score=47.50 Aligned_cols=38 Identities=29% Similarity=0.364 Sum_probs=32.1
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHH
Q 012532 367 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIAL 404 (461)
Q Consensus 367 LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~ 404 (461)
-.|++.+++-.+..++..+++|+|||.+|.++|..+..
T Consensus 103 ~~G~~~~L~~~~~~~~~~~vlvlGaGg~g~a~a~~L~~ 140 (272)
T 1p77_A 103 GIGLVTDLQRLNWLRPNQHVLILGAGGATKGVLLPLLQ 140 (272)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHTTHHHHHH
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHH
Confidence 46778888888889999999999999888888877754
No 30
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=91.70 E-value=0.29 Score=51.60 Aligned_cols=52 Identities=19% Similarity=0.228 Sum_probs=45.4
Q ss_pred CCCcee----------ccCcchHHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHH
Q 012532 350 TTHLVF----------NDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIAL 404 (461)
Q Consensus 350 ~~~~~F----------NDDIQGTaaV~LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~ 404 (461)
-.+|+| .|+..||+-.++.|+. |.++..|.+.+++|+|.|..|.++|+.+..
T Consensus 207 L~~PvinVnds~tK~~fDn~yG~~eslvdgI~---Ratg~~L~GKTVgVIG~G~IGr~vA~~lra 268 (464)
T 3n58_A 207 LPFPAINVNDSVTKSKFDNKYGCKESLVDGIR---RGTDVMMAGKVAVVCGYGDVGKGSAQSLAG 268 (464)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHH
T ss_pred CCCCEEeeccHhhhhhhhhhhcchHHHHHHHH---HhcCCcccCCEEEEECcCHHHHHHHHHHHH
Confidence 479999 5677999999888885 567999999999999999999999998854
No 31
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=91.49 E-value=0.45 Score=45.64 Aligned_cols=65 Identities=14% Similarity=0.157 Sum_probs=46.6
Q ss_pred CCceeccC------cchHHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEE
Q 012532 351 THLVFNDD------IQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLV 424 (461)
Q Consensus 351 ~~~~FNDD------IQGTaaV~LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lv 424 (461)
.+.++|-. .-.+-+|+=.++..++...+..|.+.+++|+|+|..|..+|+.+... |. +++.+
T Consensus 117 gi~v~~~~~~~~~~~~~~~svae~a~~~~l~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~-----G~-------~V~~~ 184 (293)
T 3d4o_A 117 NRTLVKLMERDDIAIYNSIPTAEGTIMMAIQHTDFTIHGANVAVLGLGRVGMSVARKFAAL-----GA-------KVKVG 184 (293)
T ss_dssp TCEEEEGGGCHHHHHHHHHHHHHHHHHHHHHHCSSCSTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEE
T ss_pred CCeEEEecCCceeeeeccHhHHHHHHHHHHHhcCCCCCCCEEEEEeeCHHHHHHHHHHHhC-----CC-------EEEEE
Confidence 45556532 22455666666666667778899999999999999999999987532 53 47777
Q ss_pred cCC
Q 012532 425 DSK 427 (461)
Q Consensus 425 Ds~ 427 (461)
|+.
T Consensus 185 dr~ 187 (293)
T 3d4o_A 185 ARE 187 (293)
T ss_dssp ESS
T ss_pred ECC
Confidence 764
No 32
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.40 E-value=0.36 Score=45.85 Aligned_cols=38 Identities=29% Similarity=0.357 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHH
Q 012532 367 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIAL 404 (461)
Q Consensus 367 LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~ 404 (461)
-.|++.+++-.+.++++.+++|+|||.+|.++|..+..
T Consensus 103 ~~G~~~~L~~~~~~l~~k~vlViGaGg~g~a~a~~L~~ 140 (271)
T 1nyt_A 103 GVGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLS 140 (271)
T ss_dssp HHHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCcCcCCCEEEEECCcHHHHHHHHHHHH
Confidence 56777888888889999999999999888887777754
No 33
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=91.15 E-value=0.38 Score=45.76 Aligned_cols=48 Identities=25% Similarity=0.427 Sum_probs=38.8
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 368 AgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.|++.+++-.+..+++.+++|+|+|.+|.++|..+... |. +|+++|++
T Consensus 114 ~G~~~~l~~~~~~~~~~~v~iiGaG~~g~aia~~L~~~-----g~-------~V~v~~r~ 161 (275)
T 2hk9_A 114 IGFLKSLKSLIPEVKEKSILVLGAGGASRAVIYALVKE-----GA-------KVFLWNRT 161 (275)
T ss_dssp HHHHHHHHHHCTTGGGSEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSS
T ss_pred HHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHHc-----CC-------EEEEEECC
Confidence 48888888888899999999999999999999888653 42 46777754
No 34
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=91.10 E-value=0.32 Score=45.62 Aligned_cols=47 Identities=30% Similarity=0.509 Sum_probs=37.6
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 368 AgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.|++.+++-.+.++++ +++|+|+|.+|..+|..+... |. +++++|++
T Consensus 102 ~g~~~~l~~~~~~l~~-~v~iiG~G~~g~~~a~~l~~~-----g~-------~v~v~~r~ 148 (263)
T 2d5c_A 102 PGFLEALKAGGIPLKG-PALVLGAGGAGRAVAFALREA-----GL-------EVWVWNRT 148 (263)
T ss_dssp HHHHHHHHHTTCCCCS-CEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred HHHHHHHHHhCCCCCC-eEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEECC
Confidence 4888888888889999 999999999999998877542 42 46777764
No 35
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=90.41 E-value=0.26 Score=41.32 Aligned_cols=31 Identities=23% Similarity=0.411 Sum_probs=25.4
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 385 rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.|+|+|||.||+..|..|... |+ ++.++|+.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~-----G~-------~V~v~Ek~ 34 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAA-----GH-------QVHLFDKS 34 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEECC
Confidence 489999999999999888653 86 47888864
No 36
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=90.29 E-value=2.4 Score=43.63 Aligned_cols=114 Identities=24% Similarity=0.276 Sum_probs=81.0
Q ss_pred cchhhhHHHHHHHHHHHHHhcCCCeeeEEeeCCCccHHH---HHHHHc---CCC-c---eeccC----------cchHHH
Q 012532 305 AIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFD---LLEKYG---TTH-L---VFNDD----------IQGTAS 364 (461)
Q Consensus 305 ~~geeY~~fvdEfv~av~~~fGp~~lIqfEDF~~~nAf~---lL~rYr---~~~-~---~FNDD----------IQGTaa 364 (461)
.+.+|-..|...|++++.+.-||..-|-=+|++.. +.. +.+.|. +.. + ++--+ -.-||-
T Consensus 114 ~s~~e~~~~~r~f~~~l~~~~g~~~dv~a~D~gt~-~~~m~~~~~~y~~~~~~~~~~~~~~tGk~~~~GGs~~~~~aTg~ 192 (419)
T 1gtm_A 114 LSDREKERLARGYIRAIYDVISPYEDIPAPDVYTN-PQIMAWMMDEYETISRRKTPAFGIITGKPLSIGGSLGRIEATAR 192 (419)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCC-HHHHHHHHHHHHHHHTTSSCGGGGCSSCCGGGTCCTTTTTHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEeCCCCCCC-HHHHHHHHHHHHHhhCCCCCccceEecCcchhCCCCCCCcchhh
Confidence 34567788899999999999899998999999873 322 334552 221 1 33222 123666
Q ss_pred HHHHHHHHHHHHhCCC-CCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEE-cCCCcc
Q 012532 365 VVLAGLISAMKFLGGS-LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLV-DSKGLI 430 (461)
Q Consensus 365 V~LAgllaAlrv~g~~-L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lv-Ds~GLi 430 (461)
=+.-++..+++..|.+ |++.++.|+|.|..|..+|+++... .|+ ++..+ |++|-+
T Consensus 193 Gv~~~~~~~~~~~G~~~l~gktvgI~G~G~VG~~vA~~l~~~----~G~-------kVv~~sD~~g~~ 249 (419)
T 1gtm_A 193 GASYTIREAAKVLGWDTLKGKTIAIQGYGNAGYYLAKIMSED----FGM-------KVVAVSDSKGGI 249 (419)
T ss_dssp HHHHHHHHHHHHTTCSCSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEEECSSCEE
T ss_pred HHHHHHHHHHHHhCCcccCCCEEEEEcCCHHHHHHHHHHHHh----cCC-------EEEEEeCCCccc
Confidence 6666788888999999 9999999999999999999988641 254 34444 777644
No 37
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=90.07 E-value=1.6 Score=41.32 Aligned_cols=81 Identities=20% Similarity=0.194 Sum_probs=52.5
Q ss_pred EeeCCCccHHHHHHHHcC------CCceeccCcchHHHHHHHHHHHHHHHh-CCCCCCceEEEeC-cchHHHHHHHHHHH
Q 012532 333 FEDFANHNAFDLLEKYGT------THLVFNDDIQGTASVVLAGLISAMKFL-GGSLADQRFLFLG-AGEAGTGIAELIAL 404 (461)
Q Consensus 333 fEDF~~~nAf~lL~rYr~------~~~~FNDDIQGTaaV~LAgllaAlrv~-g~~L~d~rivf~G-AGsAgiGIA~li~~ 404 (461)
++-+.-..+.+++++-+. ...+| .|..|.- ..-.|++.+++-. +.++++.+++|.| +|-+|.+||..+..
T Consensus 64 ~~G~~~~~~~~~~~~~~~~~~gavnt~~~-~~~~G~n-Td~~g~~~~l~~~~~~~l~gk~vlVtGaaGGiG~aia~~L~~ 141 (287)
T 1lu9_A 64 VGGGDMAAGERVFEAVKKRFFGPFRVSCM-LDSNGSN-TTAAAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAG 141 (287)
T ss_dssp EECSCHHHHHHHHHHHHHHCBTTBCCEEE-ECSTTHH-HHHHHHHHHHHHHTTSCCTTCEEEEETCSSHHHHHHHHHHHH
T ss_pred EccchHHHHHHHHHHHHHhcCCCeEEEEe-cCCCcCC-chHHHHHHHHHHhhccCCCCCEEEEECCCcHHHHHHHHHHHH
Confidence 444444566677766542 22334 3444532 2345677777766 7889999999999 89888888887754
Q ss_pred HHHHhCCCChhhhcCcEEEEcCC
Q 012532 405 EISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 405 ~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
. |. +++++|++
T Consensus 142 ~-----G~-------~V~i~~R~ 152 (287)
T 1lu9_A 142 E-----GA-------EVVLCGRK 152 (287)
T ss_dssp T-----TC-------EEEEEESS
T ss_pred C-----cC-------EEEEEECC
Confidence 2 53 37777763
No 38
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=90.01 E-value=2.5 Score=44.28 Aligned_cols=118 Identities=19% Similarity=0.195 Sum_probs=83.6
Q ss_pred chhhhHHHHHHHHHHHHHhcCCCeeeEEeeCCCccHH--HHHHHHc---CC--Cceecc----------CcchHHHHHHH
Q 012532 306 IGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAF--DLLEKYG---TT--HLVFND----------DIQGTASVVLA 368 (461)
Q Consensus 306 ~geeY~~fvdEfv~av~~~fGp~~lIqfEDF~~~nAf--~lL~rYr---~~--~~~FND----------DIQGTaaV~LA 368 (461)
+..|-..|-..||.++.+..||..-|-=+|++..-.. -+.+.|+ +. ..++-. .-.-||-=+.-
T Consensus 136 s~~e~~r~~r~f~~~L~~~ig~~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~~tGk~~~~GGs~~r~~aTg~Gv~~ 215 (449)
T 1bgv_A 136 SDREVMRFCQAFMTELYRHIGPDIDVPAGDLGVGAREIGYMYGQYRKIVGGFYNGVLTGKARSFGGSLVRPEATGYGSVY 215 (449)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhheeCCCCcCCCCCCCCCHHHHHHHHHHHHHhcCCCcCceEecCCcccCCCCCcccchhHHHHH
Confidence 3456777888899999888999999999999876221 1333443 22 122211 11336666666
Q ss_pred HHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCccccCC
Q 012532 369 GLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSR 434 (461)
Q Consensus 369 gllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R 434 (461)
++-.+++..|.+|++.+|+|.|.|..|...|+++.+. |. +=+-+.|++|-|....
T Consensus 216 ~~~~~~~~~G~~l~g~~v~VqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~G~i~dp~ 270 (449)
T 1bgv_A 216 YVEAVMKHENDTLVGKTVALAGFGNVAWGAAKKLAEL-----GA------KAVTLSGPDGYIYDPE 270 (449)
T ss_dssp HHHHHHHHTTCCSTTCEEEECCSSHHHHHHHHHHHHH-----TC------EEEEEEETTEEEECTT
T ss_pred HHHHHHHHccCCcCCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEeCCceEECCC
Confidence 7778888899999999999999999999999888654 53 2344789888887753
No 39
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=89.99 E-value=1.4 Score=46.54 Aligned_cols=117 Identities=17% Similarity=0.202 Sum_probs=84.3
Q ss_pred chhhhHHHHHHHHHHHHHhcCCCeeeEEeeCCCccHH--HHHHHHcC---C-Ccee----------ccCcchHHHHHHHH
Q 012532 306 IGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAF--DLLEKYGT---T-HLVF----------NDDIQGTASVVLAG 369 (461)
Q Consensus 306 ~geeY~~fvdEfv~av~~~fGp~~lIqfEDF~~~nAf--~lL~rYr~---~-~~~F----------NDDIQGTaaV~LAg 369 (461)
+..|...|-..||..+.+..||..=|-=+|++..-.. -+.+.|+. . ..++ .++-.-||-=+.-+
T Consensus 159 S~~El~r~~r~f~~~L~~~iGp~~DvpApDvGt~~~em~~~~~~y~~~~~~~~gvvTGKp~~~GGs~~r~~aTg~Gv~~~ 238 (470)
T 2bma_A 159 SDNEILKFCQAFMNELYRHIGPCTDVPAGDIGVGGREIGYLYGQYKKIVNSFNGTLTGKNVKWGGSNLRVEATGYGLVYF 238 (470)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCSSCCHHHHHHHHHHHHHHHCCCSCSSSSCCGGGTCCTTTTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhhccCCCCCccCCCCCCChHHHHHHHHHHHHhcCCcccEEeCCCccCCCCCCccccchHHHHHH
Confidence 4566777888899999988899988999999874221 14455542 1 0111 11223466666667
Q ss_pred HHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEE-EEcCCCccccCC
Q 012532 370 LISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIW-LVDSKGLIVSSR 434 (461)
Q Consensus 370 llaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~-lvDs~GLi~~~R 434 (461)
+-.+++..|.+|++.||+|-|.|..|...|+.+.+. |. +++ +.|++|-|+...
T Consensus 239 ~~~~l~~~G~~l~g~~vaVqG~GnVG~~~a~~L~~~-----Ga-------kvVavsD~~G~i~dp~ 292 (470)
T 2bma_A 239 VLEVLKSLNIPVEKQTAVVSGSGNVALYCVQKLLHL-----NV-------KVLTLSDSNGYVYEPN 292 (470)
T ss_dssp HHHHHHTTTCCGGGCEEEEECSSHHHHHHHHHHHHT-----TC-------EECEEEETTEEEECSS
T ss_pred HHHHHHhccCCcCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEEeCCceEECCC
Confidence 788889899999999999999999999999998653 53 455 888888877653
No 40
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=88.72 E-value=0.39 Score=45.89 Aligned_cols=38 Identities=26% Similarity=0.254 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHH
Q 012532 366 VLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIA 403 (461)
Q Consensus 366 ~LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~ 403 (461)
...|++.+++..+.++++.+++|.|||.+|.++|..+.
T Consensus 111 d~~G~~~~L~~~~~~l~~k~vlV~GaGgiG~aia~~L~ 148 (287)
T 1nvt_A 111 DGIGARMALEEEIGRVKDKNIVIYGAGGAARAVAFELA 148 (287)
T ss_dssp HHHHHHHHHHHHHCCCCSCEEEEECCSHHHHHHHHHHT
T ss_pred CHHHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHH
Confidence 67889999998888999999999999866666666553
No 41
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=87.47 E-value=0.57 Score=48.38 Aligned_cols=99 Identities=13% Similarity=0.155 Sum_probs=63.5
Q ss_pred HHHHHHHHHHhcCCCeeeEEeeCCCccHHHHHHHHc-CCCcee--ccCcchHHHHHHHHHHHHHHHhC--------CCCC
Q 012532 314 LHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYG-TTHLVF--NDDIQGTASVVLAGLISAMKFLG--------GSLA 382 (461)
Q Consensus 314 vdEfv~av~~~fGp~~lIqfEDF~~~nAf~lL~rYr-~~~~~F--NDDIQGTaaV~LAgllaAlrv~g--------~~L~ 382 (461)
+..+++.+...| |+ |.|+-+....-.++-++|. ..+|++ |+..-+.+.....-++..+.... ..-.
T Consensus 135 ~~~~l~~~a~~~-~~--v~~~~vd~~~~~~~~~~~~i~svPt~~i~g~~~~~G~~~~~~l~~~l~~~~~~~~~~~~~~~~ 211 (521)
T 1hyu_A 135 VVQALNLMAVLN-PR--IKHTAIDGGTFQNEITERNVMGVPAVFVNGKEFGQGRMTLTEIVAKVDTGAEKRAAEALNKRD 211 (521)
T ss_dssp HHHHHHHHHHHC-TT--EEEEEEETTTCHHHHHHTTCCSSSEEEETTEEEEESCCCHHHHHHHHCCSSCCHHHHHHHTSC
T ss_pred HHHHHHHHHhHc-Cc--eEEEEEechhhHHHHHHhCCCccCEEEECCEEEecCCCCHHHHHHHHhhcccccccccccccC
Confidence 556666666677 54 4555443445567888986 467754 66666667666666666543321 1123
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
..+|+|+|||.||+..|..+.. .|+ ++.++|.+
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~-----~G~-------~v~lie~~ 244 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSAR-----KGI-------RTGLMGER 244 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cccEEEECCcHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 4679999999999999988754 264 47777753
No 42
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=87.14 E-value=0.55 Score=44.91 Aligned_cols=90 Identities=14% Similarity=0.315 Sum_probs=53.8
Q ss_pred HHHHHHHHHHhcC--------CCeeeEEeeCCCccHHHHHH--HHcCCCceeccCcchHHHHHHHHHHHHHHHhCCCCCC
Q 012532 314 LHEFMTAVKQNYG--------ERILIQFEDFANHNAFDLLE--KYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLAD 383 (461)
Q Consensus 314 vdEfv~av~~~fG--------p~~lIqfEDF~~~nAf~lL~--rYr~~~~~FNDDIQGTaaV~LAgllaAlrv~g~~L~d 383 (461)
+++|++.++..|. -..++.+=|- ++.|..+=. ....+ .=+|-|- .|++.+++.. .+++
T Consensus 42 l~~~~~~~~~~~~G~nVT~P~K~~v~~~~d~-~~~A~~iGAvNTi~~~-~G~NTD~--------~G~~~~l~~~--~~~~ 109 (253)
T 3u62_A 42 FDTEIRRILEEYDGFNATIPHKERVMRYVEP-SEDAQRIKAVNCVFRG-KGYNTDW--------VGVVKSLEGV--EVKE 109 (253)
T ss_dssp HHHHHHHHHHHCSEEEECTTCTTGGGGGSEE-CHHHHHHTCCCEEETT-EEECCHH--------HHHHHHTTTC--CCCS
T ss_pred HHHHHHHHhhCCCceeecCChHHHHHHHhCC-CHHHHHcCcceEeecC-EEEcchH--------HHHHHHHHhc--CCCC
Confidence 4566665553332 1234455555 666654311 00111 4456663 3567777644 5788
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+++|+|||.+|.+|+..+... |. ++|+++|+.
T Consensus 110 -~vliiGaGg~a~ai~~~L~~~-----G~------~~I~v~nR~ 141 (253)
T 3u62_A 110 -PVVVVGAGGAARAVIYALLQM-----GV------KDIWVVNRT 141 (253)
T ss_dssp -SEEEECCSHHHHHHHHHHHHT-----TC------CCEEEEESC
T ss_pred -eEEEECcHHHHHHHHHHHHHc-----CC------CEEEEEeCC
Confidence 999999999999988877542 64 468888873
No 43
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=86.38 E-value=1.1 Score=43.28 Aligned_cols=36 Identities=6% Similarity=0.177 Sum_probs=26.9
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHH
Q 012532 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIAL 404 (461)
Q Consensus 368 AgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~ 404 (461)
.|+..+++-.+.. .+.+++|+|||.||.+++..+..
T Consensus 105 ~G~~~~l~~~~~~-~~~~vlvlGaGgaarav~~~L~~ 140 (271)
T 1npy_A 105 IAIVKLIEKYHLN-KNAKVIVHGSGGMAKAVVAAFKN 140 (271)
T ss_dssp HHHHHHHHHTTCC-TTSCEEEECSSTTHHHHHHHHHH
T ss_pred HHHHHHHHHhCCC-CCCEEEEECCcHHHHHHHHHHHH
Confidence 4555566655554 56899999999999999888754
No 44
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=86.26 E-value=0.68 Score=45.59 Aligned_cols=39 Identities=21% Similarity=0.319 Sum_probs=34.2
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 379 ~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
.+|++.||+|+|||..|.-+|+.|+.+ |+ .+|.++|.+=
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La~a-----GV------G~i~lvD~D~ 70 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLTRC-----GI------GKLLLFDYDK 70 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCCB
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHHHc-----CC------CEEEEECCCc
Confidence 578999999999999999999999876 65 5899999754
No 45
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=85.33 E-value=0.55 Score=47.42 Aligned_cols=38 Identities=26% Similarity=0.432 Sum_probs=33.1
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 380 ~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
+|++.||+++|||.+|..+|+.|+.+ |+ ++|.++|.+=
T Consensus 31 kL~~~~VlIvGaGGlGs~va~~La~a-----GV------g~ItlvD~D~ 68 (340)
T 3rui_A 31 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNGT 68 (340)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCCB
T ss_pred HHhCCEEEEECCCHHHHHHHHHHHHc-----CC------CEEEEecCCE
Confidence 57789999999999999999999775 76 5899999854
No 46
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=83.31 E-value=0.8 Score=43.25 Aligned_cols=38 Identities=26% Similarity=0.448 Sum_probs=31.9
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 380 ~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
+|++.+|+|+|+|..|..+|+.|+.+ |+ ++|.++|.+-
T Consensus 28 ~l~~~~VlVvG~Gg~G~~va~~La~~-----Gv------~~i~lvD~d~ 65 (249)
T 1jw9_B 28 ALKDSRVLIVGLGGLGCAASQYLASA-----GV------GNLTLLDFDT 65 (249)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCCB
T ss_pred HHhCCeEEEEeeCHHHHHHHHHHHHc-----CC------CeEEEEcCCC
Confidence 35578999999999999999999765 65 5899999874
No 47
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=82.76 E-value=0.78 Score=43.45 Aligned_cols=38 Identities=29% Similarity=0.399 Sum_probs=32.1
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 380 ~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
+|++.+|+++|+|..|..+|+.|+.+ |+ ++|.++|.+=
T Consensus 25 ~l~~~~VlvvG~GglG~~va~~La~~-----Gv------g~i~lvD~d~ 62 (251)
T 1zud_1 25 KLLDSQVLIIGLGGLGTPAALYLAGA-----GV------GTLVLADDDD 62 (251)
T ss_dssp HHHTCEEEEECCSTTHHHHHHHHHHT-----TC------SEEEEECCCB
T ss_pred HHhcCcEEEEccCHHHHHHHHHHHHc-----CC------CeEEEEeCCC
Confidence 46688999999999999999988765 76 5899999763
No 48
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=82.30 E-value=19 Score=36.42 Aligned_cols=106 Identities=20% Similarity=0.218 Sum_probs=72.7
Q ss_pred hhhhHHHHHHHHHHHHHhcCCCeeeEEeeCCCccHHH---HHHHHcC---CCcee---ccCcchHHHHHHHHHHHHHHHh
Q 012532 307 GQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFD---LLEKYGT---THLVF---NDDIQGTASVVLAGLISAMKFL 377 (461)
Q Consensus 307 geeY~~fvdEfv~av~~~fGp~~lIqfEDF~~~nAf~---lL~rYr~---~~~~F---NDDIQGTaaV~LAgllaAlrv~ 377 (461)
..+-++++..|.+++.+..|+ -|-=+|++.. +.+ +.+.|+- +-..+ .|=-.-||-=+.-++-.+++..
T Consensus 92 ~~~~e~~~r~~~~~~~~l~g~--~ipa~D~gt~-~~~m~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~ 168 (355)
T 1c1d_A 92 PSTWARILRIHAENIDKLSGN--YWTGPDVNTN-SADMDTLNDTTEFVFGRSLERGGAGSSAFTTAVGVFEAMKATVAHR 168 (355)
T ss_dssp HHHHHHHHHHHHHHHHHTTTS--EEEEECTTCC-HHHHHHHHHHCSCBCCCCGGGTSCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHHHHHHHHhcCC--cccCCCCCCC-HHHHHHHHHhcCeeeccchhhCCCCCchhHHHHHHHHHHHHHHHhc
Confidence 345567788888888887776 5788999763 332 5556651 11111 1111236666666778888888
Q ss_pred CC-CCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 378 GG-SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 378 g~-~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
|. .|++.+++|.|.|..|..+|+.+.. .|. ++++.|++
T Consensus 169 G~~~L~GktV~I~G~GnVG~~~A~~l~~-----~Ga-------kVvvsD~~ 207 (355)
T 1c1d_A 169 GLGSLDGLTVLVQGLGAVGGSLASLAAE-----AGA-------QLLVADTD 207 (355)
T ss_dssp TCCCSTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSC
T ss_pred CCCCCCCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 98 8999999999999999999998753 263 56677764
No 49
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=81.85 E-value=1.6 Score=42.38 Aligned_cols=35 Identities=20% Similarity=0.464 Sum_probs=27.3
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
..||||+|||.||+..|..|... |-. -+|.++|.+
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~-----~~~-----~~Vtlie~~ 36 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLA-----DPS-----IEVTLIEPN 36 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CTT-----SEEEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhc-----CcC-----CeEEEEeCC
Confidence 46899999999999999988653 321 268889875
No 50
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=81.29 E-value=0.99 Score=45.10 Aligned_cols=39 Identities=23% Similarity=0.512 Sum_probs=33.2
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 379 ~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
.+|++.+|+++|+|..|..+|+.|+.+ |+ .+|.++|.+=
T Consensus 114 ~~L~~~~VlvvG~GglGs~va~~La~a-----Gv------g~i~lvD~D~ 152 (353)
T 3h5n_A 114 DKLKNAKVVILGCGGIGNHVSVILATS-----GI------GEIILIDNDQ 152 (353)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEEECCB
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHhC-----CC------CeEEEECCCc
Confidence 456789999999999999999999876 75 5899999753
No 51
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=80.85 E-value=2.1 Score=42.80 Aligned_cols=162 Identities=13% Similarity=0.094 Sum_probs=84.5
Q ss_pred cchHHHHHhcCCCCCceEEEEecCceeeccCCCCCC--ccccchhhhhhHhhhcCCCCCCeeeEEeecCCC-----cccc
Q 012532 219 KGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCH--GMGIPVGKLSLYTALGGIRPSACLPVTIDVGTN-----NEKL 291 (461)
Q Consensus 219 ~g~i~~il~Nwp~~~v~viVVTDGerILGLGDlG~~--GmgI~iGKl~LYta~gGI~P~~~LPV~LDvGTn-----Ne~L 291 (461)
+..+.++.+. +.+|+|.++++...|+.|.... |..|..++-.++ ++. +|+|.+.+- +++.
T Consensus 20 P~~v~~L~~~----G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~---~~a------diil~v~~p~~~~~~~~~ 86 (384)
T 1l7d_A 20 PEVVKKLVGL----GFEVIVEQGAGVGASITDDALTAAGATIASTAAQAL---SQA------DVVWKVQRPMTAEEGTDE 86 (384)
T ss_dssp HHHHHHHHHT----TCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHH---SSC------SEEEEEECCCCGGGSCCG
T ss_pred HHHHHHHHhC----CCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhh---cCC------CEEEEecCcccccCCHHH
Confidence 3445555543 5689999999988999987754 677776665555 333 366665432 1111
Q ss_pred ---c-cCcccccccccccchhhhHHHHHHHHHHHHHhcCCCeeeEEeeCCCccHHHHHHHHcCCCceeccCcchHHHHHH
Q 012532 292 ---L-DDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVL 367 (461)
Q Consensus 292 ---L-~DplYlGlr~~R~~geeY~~fvdEfv~av~~~fGp~~lIqfEDF~~~nAf~lL~rYr~~~~~FNDDIQGTaaV~L 367 (461)
+ ..-.+++.-+.- ++. +.++++.++ |- .++.+|-.....+- ..+++|+ -.+ .+
T Consensus 87 i~~l~~~~~~i~~~~~~-----~~~---~~~~~~~~~-gi-~~~~~e~~~~~~~~-------~~l~~l~----~~a--~~ 143 (384)
T 1l7d_A 87 VALIKEGAVLMCHLGAL-----TNR---PVVEALTKR-KI-TAYAMELMPRISRA-------QSMDILS----SQS--NL 143 (384)
T ss_dssp GGGSCTTCEEEEECCGG-----GCH---HHHHHHHHT-TC-EEEEGGGCCCSGGG-------GGGCHHH----HHH--HH
T ss_pred HHhhccCCEEEEEeccc-----CCH---HHHHHHHHC-CC-EEEEeccccccccc-------cccchhh----HHH--HH
Confidence 1 112233332221 111 122233221 12 12233222211000 0111222 111 22
Q ss_pred H---HHHHHHHHhCC----------CCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 368 A---GLISAMKFLGG----------SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 368 A---gllaAlrv~g~----------~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
| +++.+.+..++ .+...+++|+|+|.+|.++|+.+.. .|. +++.+|++.
T Consensus 144 ag~~av~~~~~~~~~~~~~~~~~~~~l~g~~V~ViGaG~iG~~aa~~a~~-----~Ga-------~V~~~d~~~ 205 (384)
T 1l7d_A 144 AGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKR-----LGA-------VVMATDVRA 205 (384)
T ss_dssp HHHHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCS
T ss_pred HHHHHHHHHHHHhhhcccchhccCCCCCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCCH
Confidence 2 45566665553 5789999999999999999987743 262 388888754
No 52
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=80.58 E-value=3 Score=42.51 Aligned_cols=54 Identities=22% Similarity=0.330 Sum_probs=43.4
Q ss_pred CCceeccCc---chHHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHH
Q 012532 351 THLVFNDDI---QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIAL 404 (461)
Q Consensus 351 ~~~~FNDDI---QGTaaV~LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~ 404 (461)
.+.+.|.-- +.+|=-+++.+++..|-.+..|.+.+|.|+|.|..|-.+|+.+..
T Consensus 81 gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~~~~l~g~tvGIIGlG~IG~~vA~~l~~ 137 (380)
T 2o4c_A 81 GIAWSSAPGCNARGVVDYVLGCLLAMAEVRGADLAERTYGVVGAGQVGGRLVEVLRG 137 (380)
T ss_dssp TCEEECCTTTTHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEECCSHHHHHHHHHHHH
T ss_pred CCEEEeCCCcChHHHHHHHHHHHHHHHhhhhcccCCCEEEEEeCCHHHHHHHHHHHH
Confidence 445555332 234555899999999999999999999999999999999998864
No 53
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=79.98 E-value=4.2 Score=41.06 Aligned_cols=90 Identities=19% Similarity=0.194 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHhcCCCeeeEEeeCCCccHHHHHHHHcCCC-ceeccCc---------chHHHHHHHHHHHHHHH-hCC
Q 012532 311 AELLHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYGTTH-LVFNDDI---------QGTASVVLAGLISAMKF-LGG 379 (461)
Q Consensus 311 ~~fvdEfv~av~~~fGp~~lIqfEDF~~~nAf~lL~rYr~~~-~~FNDDI---------QGTaaV~LAgllaAlrv-~g~ 379 (461)
.+++..|.+++.+.+|+ -|-=+|++..- +.+...-+++ ++----+ --||-=+.-++..+++. .|.
T Consensus 93 ~~~~r~~~~~~~~l~g~--~i~A~D~Gt~~--~~m~~l~~~~~~~tGK~~~~ggs~~~~~aTg~GV~~~~~~~~~~~~G~ 168 (364)
T 1leh_A 93 EDMFRALGRFIQGLNGR--YITAEDVGTTV--DDMDLIHQETDYVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKEAFGS 168 (364)
T ss_dssp HHHHHHHHHHHHTTTTS--EEBCBCTTCCH--HHHHHHHTTCSCBCSCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHhcCc--eEEcccCCCCH--HHHHHHHHhcchhcccccccCCCCCcccchhhHHHHHHHHHHHhhccc
Confidence 45667777777787775 46677886533 2333333333 2221111 23444444455566665 476
Q ss_pred -CCCCceEEEeCcchHHHHHHHHHHH
Q 012532 380 -SLADQRFLFLGAGEAGTGIAELIAL 404 (461)
Q Consensus 380 -~L~d~rivf~GAGsAgiGIA~li~~ 404 (461)
+|++.+|+|.|+|..|..+|+.+..
T Consensus 169 ~~L~GktV~V~G~G~VG~~~A~~L~~ 194 (364)
T 1leh_A 169 DSLEGLAVSVQGLGNVAKALCKKLNT 194 (364)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHH
T ss_pred cCCCcCEEEEECchHHHHHHHHHHHH
Confidence 8999999999999999999998854
No 54
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=79.89 E-value=1.5 Score=42.61 Aligned_cols=43 Identities=21% Similarity=0.305 Sum_probs=29.5
Q ss_pred HHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 369 GLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 369 gllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
|++.+++-.| +.+++|+|||.||.+||..+... | .+|+++++.
T Consensus 108 Gf~~~L~~~~----~k~vlvlGaGGaaraia~~L~~~-----G-------~~v~V~nRt 150 (269)
T 3phh_A 108 GFYLSLKQKN----YQNALILGAGGSAKALACELKKQ-----G-------LQVSVLNRS 150 (269)
T ss_dssp HHHHHCC-------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred HHHHHHHHcC----CCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCC
Confidence 4556654433 78999999999999988887653 4 257777663
No 55
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=79.54 E-value=1.5 Score=43.70 Aligned_cols=37 Identities=27% Similarity=0.440 Sum_probs=32.4
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 380 ~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+|++.+|+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 33 ~L~~~~VlivG~GGlG~~ia~~La~~-----Gv------g~itlvD~d 69 (346)
T 1y8q_A 33 RLRASRVLLVGLKGLGAEIAKNLILA-----GV------KGLTMLDHE 69 (346)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCC
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEECC
Confidence 56788999999999999999999876 76 589999965
No 56
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=79.47 E-value=3 Score=42.64 Aligned_cols=64 Identities=17% Similarity=0.171 Sum_probs=49.6
Q ss_pred CCceeccCc---chHHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 351 THLVFNDDI---QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 351 ~~~~FNDDI---QGTaaV~LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
.+.+.|.-- +.+|=-+++.+|+..|-.|..|.+.++.|+|.|..|..+|+.+... |+ +++.+|.
T Consensus 84 gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~g~~l~gktvGIIGlG~IG~~vA~~l~a~-----G~-------~V~~~d~ 150 (381)
T 3oet_A 84 GIGFSAAPGCNAIAVVEYVFSALLMLAERDGFSLRDRTIGIVGVGNVGSRLQTRLEAL-----GI-------RTLLCDP 150 (381)
T ss_dssp TCEEECCTTTTHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECH
T ss_pred CEEEEECCCcCcchhHHHHHHHHHHHHHhcCCccCCCEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEECC
Confidence 445555422 3455568999999999999999999999999999999999998643 54 4666665
No 57
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=79.31 E-value=21 Score=38.02 Aligned_cols=120 Identities=19% Similarity=0.249 Sum_probs=82.9
Q ss_pred ccchhhhHHHHHHHHHHHHH--hcCCCeeeEEeeCCCccH--HHHHHHHcC---CC------ceeccCc---------ch
Q 012532 304 RAIGQEYAELLHEFMTAVKQ--NYGERILIQFEDFANHNA--FDLLEKYGT---TH------LVFNDDI---------QG 361 (461)
Q Consensus 304 R~~geeY~~fvdEfv~av~~--~fGp~~lIqfEDF~~~nA--f~lL~rYr~---~~------~~FNDDI---------QG 361 (461)
..+..|-..|.-.||+.+.+ ..||..-|-=+|++..-. --+.+.|+. .. |+-..-+ .-
T Consensus 135 ~~s~~El~r~~r~f~~eL~~~~~IGp~~dipApDvGt~~~eM~wm~d~y~~~~g~~~~~~~g~vTGKp~~~GGs~~r~eA 214 (501)
T 3mw9_A 135 NYTDNELEKITRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISA 214 (501)
T ss_dssp GSCHHHHHHHHHHHHHHHHHTTSCBTTTEECCBCTTCCHHHHHHHHHHHHHTTTTTCTTGGGSCSSCCGGGTCCTTTTTH
T ss_pred cCCHHHHHHHHHHHHHHHhhccCCCCCeeEecCCCCCCHHHHHHHHHHHHHHhCCCcccCCceeeCCcccccCCCCCCCc
Confidence 34667888999999999985 788988899999987532 126677752 11 1222222 23
Q ss_pred HHHHHHHHHHH------HHHHhCC--CCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCccccC
Q 012532 362 TASVVLAGLIS------AMKFLGG--SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSS 433 (461)
Q Consensus 362 TaaV~LAglla------Alrv~g~--~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~ 433 (461)
||-=+.-++-+ +++..|. .|++.||+|-|.|..|...|+.+.+. |. +-+-+.|++|-|+..
T Consensus 215 Tg~GV~~~~~~~l~~~~~~~~~G~~~~l~g~tVaVQG~GNVG~~aa~~L~e~-----Ga------kVVavsDs~G~iyd~ 283 (501)
T 3mw9_A 215 TGRGVFHGIENFINEASYMSILGMTPGFGDKTFVVQGFGNVGLHSMRYLHRF-----GA------KCITVGESDGSIWNP 283 (501)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHTTCCSSSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEECSSCEEECT
T ss_pred hHHHHHHHHHHHHhhhHHHHHcCCCCCcCCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEcCCceEECC
Confidence 44444444443 4456675 48999999999999999999998653 53 345588999999875
Q ss_pred C
Q 012532 434 R 434 (461)
Q Consensus 434 R 434 (461)
.
T Consensus 284 ~ 284 (501)
T 3mw9_A 284 D 284 (501)
T ss_dssp T
T ss_pred C
Confidence 4
No 58
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=78.75 E-value=1.3 Score=48.23 Aligned_cols=38 Identities=26% Similarity=0.432 Sum_probs=33.2
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 380 ~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
+|++.||+++|||..|..+|+.|+.+ |+ .+|.++|.+=
T Consensus 323 kL~~arVLIVGaGGLGs~vA~~La~a-----GV------G~ItLvD~D~ 360 (615)
T 4gsl_A 323 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNGT 360 (615)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCCB
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEcCCC
Confidence 57789999999999999999999775 76 5899999864
No 59
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=78.71 E-value=1.8 Score=41.21 Aligned_cols=32 Identities=22% Similarity=0.328 Sum_probs=25.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
-||+|+|||.||+-.|-.|.. .|+ ++.++|+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~-----~G~-------~v~v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRK-----HGI-------KVTIYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEecC
Confidence 489999999999999988754 376 47777764
No 60
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=78.56 E-value=1.1 Score=48.47 Aligned_cols=38 Identities=26% Similarity=0.442 Sum_probs=32.9
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 379 ~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.+|++.||+++|||..|..||+.|+.+ |+ ++|.++|.+
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La~a-----GV------G~ItLvD~D 360 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 360 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHTT-----TC------CEEEEECCS
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEECCC
Confidence 467889999999999999999999765 76 589999965
No 61
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=78.34 E-value=3.7 Score=41.29 Aligned_cols=37 Identities=27% Similarity=0.506 Sum_probs=29.4
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 380 ~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
++.+.+++|+|||..|..+|..+... |. ++|+++|+.
T Consensus 164 ~l~g~~VlIiGaG~iG~~~a~~l~~~-----G~------~~V~v~~r~ 200 (404)
T 1gpj_A 164 SLHDKTVLVVGAGEMGKTVAKSLVDR-----GV------RAVLVANRT 200 (404)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHH-----CC------SEEEEECSS
T ss_pred cccCCEEEEEChHHHHHHHHHHHHHC-----CC------CEEEEEeCC
Confidence 57899999999999999999887543 64 367777763
No 62
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=78.28 E-value=3.6 Score=40.67 Aligned_cols=54 Identities=15% Similarity=0.220 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCceEEEeCcch-HHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 362 TASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 362 TaaV~LAgllaAlrv~g~~L~d~rivf~GAGs-AgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
-..+|-.|++..++-.+.+|++.++|++|+|. .|..+|.++... |. .+.+++++
T Consensus 139 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~-----gA-------tVtv~h~~ 193 (285)
T 3p2o_A 139 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNA-----GA-------TVSVCHIK 193 (285)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 34678888999999999999999999999976 899999998643 53 37777753
No 63
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=78.23 E-value=3.6 Score=40.66 Aligned_cols=53 Identities=13% Similarity=0.213 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCceEEEeCcch-HHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 363 ASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 363 aaV~LAgllaAlrv~g~~L~d~rivf~GAGs-AgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
..+|-.|++..++-.+.+|++.++|++|+|. .|..+|.++... |. .+.+++++
T Consensus 141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~hs~ 194 (285)
T 3l07_A 141 ESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNA-----KA-------TVTTCHRF 194 (285)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 3567788999999999999999999999976 899999998643 53 36777653
No 64
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=77.94 E-value=3.8 Score=40.81 Aligned_cols=44 Identities=25% Similarity=0.357 Sum_probs=38.4
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCceEEEeCcch-HHHHHHHHHHH
Q 012532 361 GTASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIAL 404 (461)
Q Consensus 361 GTaaV~LAgllaAlrv~g~~L~d~rivf~GAGs-AgiGIA~li~~ 404 (461)
|-..+|-.|++..++-.+.+|+..++|++|+|. .|..+|.++..
T Consensus 143 ~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~ 187 (300)
T 4a26_A 143 PFTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMK 187 (300)
T ss_dssp SCCCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHH
Confidence 334678888999999999999999999999876 89999999865
No 65
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=77.41 E-value=5.3 Score=39.28 Aligned_cols=38 Identities=24% Similarity=0.287 Sum_probs=30.5
Q ss_pred CCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 378 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 378 g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+..|.+.+|.|+|+|..|..+|+.+... |. +++.+|++
T Consensus 145 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~-----G~-------~V~~~d~~ 182 (334)
T 2dbq_A 145 GYDVYGKTIGIIGLGRIGQAIAKRAKGF-----NM-------RILYYSRT 182 (334)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred ccCCCCCEEEEEccCHHHHHHHHHHHhC-----CC-------EEEEECCC
Confidence 4578899999999999999999988642 53 57777764
No 66
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=77.19 E-value=1.7 Score=40.38 Aligned_cols=34 Identities=12% Similarity=0.377 Sum_probs=27.7
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
..+|+|+|||.||+..|..+.. .|+ ++.++|+..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~-----~g~-------~v~vie~~~ 36 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRR-----SGL-------SYVILDAEA 36 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----SSC-------CEEEECCSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 4589999999999999988854 364 589999864
No 67
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=76.57 E-value=0.98 Score=38.19 Aligned_cols=37 Identities=19% Similarity=0.157 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHH
Q 012532 362 TASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIA 403 (461)
Q Consensus 362 TaaV~LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~ 403 (461)
..+|+.+++-.+-+.. +.+++|+|+|..|..+|..+.
T Consensus 5 ~~sv~~~a~~~~~~~~-----~~~v~iiG~G~iG~~~a~~l~ 41 (144)
T 3oj0_A 5 KVSIPSIVYDIVRKNG-----GNKILLVGNGMLASEIAPYFS 41 (144)
T ss_dssp CCSHHHHHHHHHHHHC-----CCEEEEECCSHHHHHHGGGCC
T ss_pred cccHHHHHHHHHHhcc-----CCEEEEECCCHHHHHHHHHHH
Confidence 3445555544333322 789999999999988877663
No 68
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=76.11 E-value=2.4 Score=38.42 Aligned_cols=32 Identities=25% Similarity=0.315 Sum_probs=26.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.+|+|+|||.||+..|..+... |. ++.++|+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 34 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRA-----RK-------NILLVDAG 34 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----CC-------CEEEEeCC
Confidence 5899999999999999888543 53 68999964
No 69
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=76.05 E-value=2.4 Score=40.12 Aligned_cols=35 Identities=20% Similarity=0.427 Sum_probs=28.2
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
..+|+|+|||.||+..|..+.. .|. .++.++|++.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~-----~g~------~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKD-----FGI------TDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC------CCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHH-----cCC------CcEEEEecCC
Confidence 4689999999999999998854 253 1699999875
No 70
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=75.65 E-value=2.6 Score=40.73 Aligned_cols=39 Identities=18% Similarity=0.153 Sum_probs=28.6
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCcc
Q 012532 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (461)
Q Consensus 380 ~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GLi 430 (461)
+++..+|+|+|||.||+..|..+.. .|+ ++.++|+.-..
T Consensus 8 ~m~~~dVvIVGaG~aGl~~A~~L~~-----~G~-------~v~viE~~~~~ 46 (379)
T 3alj_A 8 PGKTRRAEVAGGGFAGLTAAIALKQ-----NGW-------DVRLHEKSSEL 46 (379)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSSSC
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecCCCC
Confidence 4456799999999999999988754 364 58888876443
No 71
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=75.65 E-value=3.3 Score=35.35 Aligned_cols=37 Identities=22% Similarity=0.360 Sum_probs=27.6
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 379 ~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+.+...+|+|+|+|..|..+|+.+... |. +++++|++
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~-----g~-------~V~vid~~ 51 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSS-----GH-------SVVVVDKN 51 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESC
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 455678999999999999999888542 52 57888764
No 72
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=75.62 E-value=4.5 Score=40.04 Aligned_cols=42 Identities=19% Similarity=0.298 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCceEEEeCcch-HHHHHHHHHHH
Q 012532 363 ASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIAL 404 (461)
Q Consensus 363 aaV~LAgllaAlrv~g~~L~d~rivf~GAGs-AgiGIA~li~~ 404 (461)
..+|-.|++..++-.+.+|+..++|++|+|. .|..+|.++..
T Consensus 141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~ 183 (286)
T 4a5o_A 141 RPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLL 183 (286)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHH
Confidence 3567788999999999999999999999875 89999999864
No 73
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=75.33 E-value=2.4 Score=39.83 Aligned_cols=31 Identities=23% Similarity=0.458 Sum_probs=24.8
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 385 rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
-|+|+|||.||+..|..|.. .|+ ++.++|++
T Consensus 6 DViIVGaGpaGl~~A~~La~-----~G~-------~V~v~Er~ 36 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKR 36 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 38999999999999988754 376 47788864
No 74
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=75.09 E-value=4.4 Score=40.35 Aligned_cols=55 Identities=18% Similarity=0.241 Sum_probs=44.6
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCceEEEeCcc-hHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 361 GTASVVLAGLISAMKFLGGSLADQRFLFLGAG-EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 361 GTaaV~LAgllaAlrv~g~~L~d~rivf~GAG-sAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+-..+|-.|++-.++-.+.+++..++|++|+| ..|.-+|.++... |. .+.+++++
T Consensus 143 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~hs~ 198 (301)
T 1a4i_A 143 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWN-----NA-------TVTTCHSK 198 (301)
T ss_dssp CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT
T ss_pred CccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 34467788899999999999999999999999 5799999888642 42 47788754
No 75
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=74.89 E-value=4.4 Score=39.70 Aligned_cols=66 Identities=20% Similarity=0.220 Sum_probs=47.2
Q ss_pred CCCceeccCc---chHHHHHHHHHHHHHHHh---------------------CCCCCCceEEEeCcchHHHHHHHHHHHH
Q 012532 350 TTHLVFNDDI---QGTASVVLAGLISAMKFL---------------------GGSLADQRFLFLGAGEAGTGIAELIALE 405 (461)
Q Consensus 350 ~~~~~FNDDI---QGTaaV~LAgllaAlrv~---------------------g~~L~d~rivf~GAGsAgiGIA~li~~~ 405 (461)
..+.+.|--- +.+|=-+++.+|+..|-. |..|.+.+|.|+|+|..|..+|+.+..
T Consensus 98 ~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~- 176 (330)
T 2gcg_A 98 RGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKP- 176 (330)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEEEEECCSHHHHHHHHHHGG-
T ss_pred CCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEEEEECcCHHHHHHHHHHHH-
Confidence 4567777533 334445788888887622 356889999999999999999998753
Q ss_pred HHHhCCCChhhhcCcEEEEcCC
Q 012532 406 ISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 406 m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.|. +++.+|++
T Consensus 177 ----~G~-------~V~~~d~~ 187 (330)
T 2gcg_A 177 ----FGV-------QRFLYTGR 187 (330)
T ss_dssp ----GTC-------CEEEEESS
T ss_pred ----CCC-------EEEEECCC
Confidence 254 47778753
No 76
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=74.78 E-value=2.5 Score=34.32 Aligned_cols=24 Identities=21% Similarity=0.481 Sum_probs=19.1
Q ss_pred CCCceEEEeCcchHHHHHHHHHHH
Q 012532 381 LADQRFLFLGAGEAGTGIAELIAL 404 (461)
Q Consensus 381 L~d~rivf~GAGsAgiGIA~li~~ 404 (461)
++..+|+|+|+|..|..+|+.+..
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~ 27 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHR 27 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHH
T ss_pred CcCCcEEEECCCHHHHHHHHHHHH
Confidence 456789999999999999988754
No 77
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=74.77 E-value=2.8 Score=38.70 Aligned_cols=33 Identities=15% Similarity=0.186 Sum_probs=26.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
.+|||+|||.||+..|..+.. .|. ++.++|+..
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~ 40 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGM-----RQA-------SVKIIESLP 40 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEEcCC
Confidence 589999999999999988754 254 588999863
No 78
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=74.68 E-value=2.8 Score=38.40 Aligned_cols=33 Identities=21% Similarity=0.251 Sum_probs=27.4
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
..+|+|+|||.||+..|..+... |. ++.++|++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARY-----ML-------KTLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESS
T ss_pred ccCEEEECccHHHHHHHHHHHHC-----CC-------cEEEEecc
Confidence 46899999999999999888542 54 58999997
No 79
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=74.49 E-value=6.7 Score=38.32 Aligned_cols=65 Identities=20% Similarity=0.198 Sum_probs=47.0
Q ss_pred CCceeccCc---chHHHHHHHHHHHHHHH----------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCC
Q 012532 351 THLVFNDDI---QGTASVVLAGLISAMKF----------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTN 411 (461)
Q Consensus 351 ~~~~FNDDI---QGTaaV~LAgllaAlrv----------------~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~G 411 (461)
.+.+.|--- +.+|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+... |
T Consensus 91 gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~-----G 165 (313)
T 2ekl_A 91 NIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKKIEGLELAGKTIGIVGFGRIGTKVGIIANAM-----G 165 (313)
T ss_dssp TCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCCCTTCEEEEESCSHHHHHHHHHHHHT-----T
T ss_pred CeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCEEEEEeeCHHHHHHHHHHHHC-----C
Confidence 455555432 23445578888888775 35689999999999999999999988642 5
Q ss_pred CChhhhcCcEEEEcCC
Q 012532 412 MPLEETRKKIWLVDSK 427 (461)
Q Consensus 412 ls~eeAr~~i~lvDs~ 427 (461)
. +++.+|+.
T Consensus 166 ~-------~V~~~d~~ 174 (313)
T 2ekl_A 166 M-------KVLAYDIL 174 (313)
T ss_dssp C-------EEEEECSS
T ss_pred C-------EEEEECCC
Confidence 4 47777753
No 80
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=74.39 E-value=2.8 Score=39.14 Aligned_cols=34 Identities=21% Similarity=0.338 Sum_probs=27.1
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
..+|+|+|||.||+..|..+.. .|+ ++.++|++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~ 38 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGM-----RGL-------SFRFVDPLP 38 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 4589999999999999988753 254 588999864
No 81
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=73.17 E-value=2 Score=44.35 Aligned_cols=37 Identities=27% Similarity=0.497 Sum_probs=31.9
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 380 ~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.|++.||+++|||..|.-+|+.|+.+ |+ .+|.++|.+
T Consensus 37 ~L~~~~VlvvG~GGlGs~va~~La~a-----Gv------g~i~ivD~D 73 (434)
T 1tt5_B 37 LLDTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 73 (434)
T ss_dssp HHHTCCEEEECSSTHHHHHHHHHHHT-----TC------CCEEEEECC
T ss_pred HhcCCEEEEECcCHHHHHHHHHHHHc-----CC------CEEEEEcCC
Confidence 45788999999999999999999865 76 589999975
No 82
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=73.12 E-value=5.8 Score=37.92 Aligned_cols=42 Identities=17% Similarity=0.224 Sum_probs=33.3
Q ss_pred HHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 374 MKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 374 lrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
++..+..|.+.+++|+|+|..|..+|+.+... |. +++.+|++
T Consensus 148 ~~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~-----G~-------~V~~~d~~ 189 (300)
T 2rir_A 148 IQHTDYTIHGSQVAVLGLGRTGMTIARTFAAL-----GA-------NVKVGARS 189 (300)
T ss_dssp HHTCSSCSTTSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESS
T ss_pred HHhcCCCCCCCEEEEEcccHHHHHHHHHHHHC-----CC-------EEEEEECC
Confidence 44567899999999999999999999987532 53 47777764
No 83
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=72.94 E-value=5.2 Score=39.63 Aligned_cols=55 Identities=9% Similarity=0.099 Sum_probs=44.4
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCceEEEeCcch-HHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 361 GTASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 361 GTaaV~LAgllaAlrv~g~~L~d~rivf~GAGs-AgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+-..+|-.|++-.++..+.+++..++|++|+|. .|.-+|.++... |. .+.+++++
T Consensus 137 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~hs~ 192 (288)
T 1b0a_A 137 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLA-----GC-------TTTVTHRF 192 (288)
T ss_dssp SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTT-----TC-------EEEEECSS
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 345677888999999999999999999999995 699999887542 42 47888753
No 84
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=72.65 E-value=5.2 Score=39.67 Aligned_cols=55 Identities=16% Similarity=0.278 Sum_probs=40.4
Q ss_pred hHHHHHHHHHHHHHHH-------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcE
Q 012532 361 GTASVVLAGLISAMKF-------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKI 421 (461)
Q Consensus 361 GTaaV~LAgllaAlrv-------------------~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i 421 (461)
.+|=-+++-+|+..|- .+..|.+.+|.|+|+|..|..+|+.+.. .|+ ++
T Consensus 123 ~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIIG~G~iG~~vA~~l~~-----~G~-------~V 190 (333)
T 3ba1_A 123 DVADLAIGLILAVLRRICECDKYVRRGAWKFGDFKLTTKFSGKRVGIIGLGRIGLAVAERAEA-----FDC-------PI 190 (333)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHTTGGGGCCCCCCCCCTTCCEEEECCSHHHHHHHHHHHT-----TTC-------CE
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccccccccccCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EE
Confidence 3444567777776553 2457899999999999999999998853 254 47
Q ss_pred EEEcCC
Q 012532 422 WLVDSK 427 (461)
Q Consensus 422 ~lvDs~ 427 (461)
+.+|+.
T Consensus 191 ~~~dr~ 196 (333)
T 3ba1_A 191 SYFSRS 196 (333)
T ss_dssp EEECSS
T ss_pred EEECCC
Confidence 777764
No 85
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=72.62 E-value=4.4 Score=41.78 Aligned_cols=38 Identities=16% Similarity=0.204 Sum_probs=31.1
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCc
Q 012532 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (461)
Q Consensus 380 ~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GL 429 (461)
.+...+++|+|+|.+|.++|+++... |. +++++|.+.-
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~ 224 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATARRL-----GA-------VVSATDVRPA 224 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSTT
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEcCCHH
Confidence 36789999999999999999988543 63 5889998764
No 86
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=72.53 E-value=5.9 Score=39.01 Aligned_cols=52 Identities=13% Similarity=0.273 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCceEEEeCcch-HHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 362 TASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 362 TaaV~LAgllaAlrv~g~~L~d~rivf~GAGs-AgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
-..+|-.|++..++..+ |+..++|++|+|. .|..+|.++... |. .+.+++++
T Consensus 131 ~~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~-----gA-------tVtv~~~~ 183 (276)
T 3ngx_A 131 LVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNR-----NY-------TVSVCHSK 183 (276)
T ss_dssp SCCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT
T ss_pred CCCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 34578889999999998 9999999999984 899999998643 53 47777763
No 87
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=72.46 E-value=3.5 Score=40.53 Aligned_cols=36 Identities=28% Similarity=0.433 Sum_probs=28.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCc
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GL 429 (461)
++|||+|||.||+..|..|.+. |.. .+|.++|+..-
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~-----g~~-----~~V~lie~~~~ 37 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQA-----KYP-----GRIALINDEKH 37 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TCC-----SCEEEECCSSS
T ss_pred CCEEEEcChHHHHHHHHHHHhh-----CcC-----CCEEEEeCCCC
Confidence 5899999999999999988543 542 37999998763
No 88
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=72.29 E-value=6.3 Score=38.41 Aligned_cols=55 Identities=22% Similarity=0.315 Sum_probs=41.2
Q ss_pred hHHHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEE
Q 012532 361 GTASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIW 422 (461)
Q Consensus 361 GTaaV~LAgllaAlrv------------------~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~ 422 (461)
.+|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+... |+ +++
T Consensus 102 ~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~-----G~-------~V~ 169 (307)
T 1wwk_A 102 SVAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIELEGKTIGIIGFGRIGYQVAKIANAL-----GM-------NIL 169 (307)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEE
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccCcCCcccCCceEEEEccCHHHHHHHHHHHHC-----CC-------EEE
Confidence 3445578888887662 34678999999999999999999988542 54 477
Q ss_pred EEcCC
Q 012532 423 LVDSK 427 (461)
Q Consensus 423 lvDs~ 427 (461)
.+|+.
T Consensus 170 ~~d~~ 174 (307)
T 1wwk_A 170 LYDPY 174 (307)
T ss_dssp EECSS
T ss_pred EECCC
Confidence 77763
No 89
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=71.87 E-value=2.5 Score=39.06 Aligned_cols=33 Identities=21% Similarity=0.309 Sum_probs=26.7
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
..+|||+|||.||+..|..+... |+ ++.++|+.
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~vie~~ 54 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARA-----EI-------KPILYEGM 54 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEecC
Confidence 46899999999999999888653 64 48888873
No 90
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=71.53 E-value=4.2 Score=39.60 Aligned_cols=36 Identities=11% Similarity=0.177 Sum_probs=28.4
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCc
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GL 429 (461)
...+|+|+|||.||+..|..|.. .|+ ++.++|+.--
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~~ 39 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRD-----AGV-------DVDVYERSPQ 39 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecCCC
Confidence 45689999999999999988864 365 5888887643
No 91
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=71.01 E-value=3.4 Score=41.20 Aligned_cols=41 Identities=20% Similarity=0.331 Sum_probs=29.6
Q ss_pred HhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 376 FLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 376 v~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
+.++.-+..+|+|+|||.||+..|..+... |. ++.++++..
T Consensus 4 ~~~~~~~~~~v~IIGaG~aGl~aA~~L~~~-----g~-------~v~v~E~~~ 44 (489)
T 2jae_A 4 LIGKVKGSHSVVVLGGGPAGLCSAFELQKA-----GY-------KVTVLEART 44 (489)
T ss_dssp CCCCCCSCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSS
T ss_pred hhhcccCCCCEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeccC
Confidence 344444567999999999999999888642 53 466666654
No 92
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=71.00 E-value=3.9 Score=38.17 Aligned_cols=33 Identities=24% Similarity=0.440 Sum_probs=27.5
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+..|+|+|||.||+.+|-.+.+ .|+ ++.++|+.
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~-----~G~-------~V~vlE~~ 36 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAA-----GGH-------EVLVAEAA 36 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 4579999999999999988864 364 58999987
No 93
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=70.99 E-value=6.9 Score=38.54 Aligned_cols=37 Identities=24% Similarity=0.358 Sum_probs=30.2
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 379 ~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
..|.+.+|.|+|.|..|..+|+.+.. .|. +++.+|++
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~-----~G~-------~V~~~d~~ 178 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIP-----FGV-------KLYYWSRH 178 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGG-----GTC-------EEEEECSS
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEECCC
Confidence 67999999999999999999998743 253 57777764
No 94
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=70.76 E-value=3.7 Score=39.98 Aligned_cols=36 Identities=19% Similarity=0.470 Sum_probs=28.5
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 381 L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
.++.+|+|+|||.||+..|..|.. .|+ ++.++|+..
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 59 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQ-----NGI-------DVSVYERDN 59 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEECSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 445799999999999999988753 365 588888764
No 95
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=70.74 E-value=7.4 Score=39.80 Aligned_cols=36 Identities=22% Similarity=0.121 Sum_probs=30.1
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 381 L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
+...+++|+|+|.+|..+|+.+... |. +++++|++.
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~ 217 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRL-----GA-------KTTGYDVRP 217 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHH-----TC-------EEEEECSSG
T ss_pred cCCCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEeCCH
Confidence 5789999999999999999988654 63 588899865
No 96
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=70.73 E-value=13 Score=32.40 Aligned_cols=39 Identities=15% Similarity=0.208 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCc-chHHHHHHHHHHH
Q 012532 366 VLAGLISAMKFLGGSLADQRFLFLGA-GEAGTGIAELIAL 404 (461)
Q Consensus 366 ~LAgllaAlrv~g~~L~d~rivf~GA-GsAgiGIA~li~~ 404 (461)
.++..+.|+.....--.++++++.|| |..|..+++++..
T Consensus 22 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~ 61 (198)
T 1pqw_A 22 AYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKM 61 (198)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHH
Confidence 44444555543334446789999994 8888888776643
No 97
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=70.43 E-value=3.5 Score=40.31 Aligned_cols=37 Identities=11% Similarity=0.187 Sum_probs=27.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCc
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GL 429 (461)
.+|||+|||.||+..|..|..... .| .+|.++|++--
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~--~g-------~~V~vie~~~~ 38 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVG--SK-------ADVKVINKSRF 38 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHG--GG-------SEEEEEESSSE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCC--CC-------CeEEEEeCCCC
Confidence 479999999999999999876221 13 36888887653
No 98
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=70.20 E-value=4.4 Score=34.65 Aligned_cols=35 Identities=20% Similarity=0.415 Sum_probs=27.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC-Ccc
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK-GLI 430 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~-GLi 430 (461)
-+++|+|||.+|+-.|..+... |. ++.++|+. +++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-----g~-------~v~lie~~~~~~ 37 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-----GL-------KVLVLDGGRSKV 37 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEECSCCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEeCCCCcc
Confidence 3799999999999999887542 53 68889875 344
No 99
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=70.13 E-value=4 Score=38.09 Aligned_cols=33 Identities=18% Similarity=0.339 Sum_probs=27.0
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
..+++|+|||.||+..|..+... |. ++.++|+.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 40 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRA-----QL-------STLILEKG 40 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHHc-----CC-------cEEEEeCC
Confidence 46899999999999999887542 54 58999987
No 100
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=70.13 E-value=4.2 Score=38.70 Aligned_cols=35 Identities=26% Similarity=0.340 Sum_probs=28.5
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCc
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GL 429 (461)
+..|+|+|||.+|+.+|..+.+ .|+ ++.++|+..+
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~-----~G~-------~V~llE~~~~ 51 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAK-----ENK-------NTALFESGTM 51 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCCCC
Confidence 3589999999999999998865 264 5999998644
No 101
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=70.13 E-value=4.1 Score=38.70 Aligned_cols=35 Identities=17% Similarity=0.262 Sum_probs=27.6
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
...+|+|+|||.||+..|..+.. .|+ ++.++|+..
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~ 47 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGM-----NNI-------SCRIIESMP 47 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecCC
Confidence 35689999999999999987753 254 588999864
No 102
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=70.11 E-value=7.9 Score=38.29 Aligned_cols=35 Identities=23% Similarity=0.385 Sum_probs=27.8
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 381 L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
++..+++|+|+|..|..+|+.+... |. +++++|++
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~~-----Ga-------~V~~~d~~ 198 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALGM-----GA-------QVTILDVN 198 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEECC
Confidence 7789999999999999999887532 53 57777763
No 103
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=70.10 E-value=4.1 Score=39.61 Aligned_cols=37 Identities=14% Similarity=0.173 Sum_probs=28.2
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCc
Q 012532 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (461)
Q Consensus 381 L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GL 429 (461)
.+.-+|+|+|||.||+..|..|... |+ ++.++|+.--
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~-----G~-------~V~v~E~~~~ 57 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQS-----GI-------DCDVYEAVKE 57 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-----CC-------CEEEEeCCCC
Confidence 3456899999999999999888643 65 5888887643
No 104
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=70.02 E-value=4 Score=38.93 Aligned_cols=34 Identities=18% Similarity=0.342 Sum_probs=28.1
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
+..|+|+|||.+|+.+|..+.+ .|. ++.++|+..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~-----~G~-------~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAK-----RGE-------EVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 4679999999999999998864 264 599999874
No 105
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=70.01 E-value=4 Score=38.86 Aligned_cols=36 Identities=22% Similarity=0.375 Sum_probs=28.6
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCcc
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GLi 430 (461)
+-.|+|+|||.||+..|-.+.. .|+ ++.++|+.-.+
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~-----~G~-------~V~l~E~~~~~ 39 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKRPEI 39 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSST
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCCCC
Confidence 4579999999999999988864 365 58889887643
No 106
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=69.95 E-value=5 Score=32.44 Aligned_cols=33 Identities=21% Similarity=0.360 Sum_probs=24.9
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+.+|+|+|+|..|..+|+.+... |. +++++|++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~-----g~-------~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEK-----GH-------DIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 35899999999999999887542 42 57888763
No 107
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=69.72 E-value=3.7 Score=39.73 Aligned_cols=35 Identities=20% Similarity=0.286 Sum_probs=27.7
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCc
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GL 429 (461)
+.+|+|+|||.||+..|..+.. .|+ ++.++|+..-
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~-----~G~-------~V~viE~~~~ 40 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGR-----QGH-------RVVVVEQARR 40 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSCC
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCCCC
Confidence 4689999999999999988864 365 4888887643
No 108
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=69.72 E-value=3.6 Score=40.97 Aligned_cols=35 Identities=20% Similarity=0.231 Sum_probs=27.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
++|||+|||.||+..|..|... +- .-+|.++|.+-
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~VtlI~~~~ 37 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNL-----MP-----DLKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CT-----TCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHhcc-----Cc-----CCeEEEEcCCC
Confidence 4799999999999999988643 21 12688998763
No 109
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=69.59 E-value=4.8 Score=33.39 Aligned_cols=34 Identities=21% Similarity=0.458 Sum_probs=25.9
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+..+++|+|+|..|..+|+.+... |. ++.++|++
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~-----g~-------~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAA-----GK-------KVLAVDKS 38 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEECC
Confidence 346899999999999999988642 54 47778763
No 110
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=69.59 E-value=4 Score=37.99 Aligned_cols=33 Identities=21% Similarity=0.367 Sum_probs=26.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
..|+|+|||.+|+..|..|.. .|+ ++.++|+.-
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~-----~G~-------~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHH-----CCC-------cEEEEECCC
Confidence 479999999999999988865 365 488888763
No 111
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=69.55 E-value=4.1 Score=37.26 Aligned_cols=33 Identities=15% Similarity=0.178 Sum_probs=25.7
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEE-EcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWL-VDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~l-vDs~ 427 (461)
..+|||+|||.||+..|..+... |. ++.+ +|+.
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~li~e~~ 37 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRG-----GL-------KNVVMFEKG 37 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-----TC-------SCEEEECSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----CC-------CeEEEEeCC
Confidence 35899999999999999988653 54 3566 8873
No 112
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=68.91 E-value=6.5 Score=38.84 Aligned_cols=35 Identities=20% Similarity=0.339 Sum_probs=27.3
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 381 L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
++..+++|+|||.+|.+++..+... |. +++++|++
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~-----Ga-------~V~v~dr~ 199 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGL-----GA-------QVQIFDIN 199 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEeCC
Confidence 6678999999999999998887542 52 57777763
No 113
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=68.84 E-value=4.5 Score=37.67 Aligned_cols=33 Identities=27% Similarity=0.397 Sum_probs=26.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+.+|+|+|||.||+..|..+... |+ ++.++|+.
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 48 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARS-----GF-------SVAILDKA 48 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-----CC-------cEEEEeCC
Confidence 46899999999999999887542 54 58899975
No 114
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=68.67 E-value=4.4 Score=38.52 Aligned_cols=35 Identities=26% Similarity=0.313 Sum_probs=28.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCcc
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GLi 430 (461)
..|+|+|||.+|+.+|-.+... |. ++.++|+....
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~-----G~-------~V~vie~~~~~ 38 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQ-----GV-------KTLLVDAFDPP 38 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCCCCC
Confidence 4799999999999999988642 64 59999987543
No 115
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=68.65 E-value=5.4 Score=38.56 Aligned_cols=35 Identities=31% Similarity=0.508 Sum_probs=27.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCc
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GL 429 (461)
+..|+|+|||.||+..|-.+.. .|+ ++.++|++-.
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~-----~G~-------~V~v~E~~~~ 39 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNK-----SGF-------KVKIVEKQKF 39 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSCS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCCC
Confidence 3589999999999999987753 365 5889998743
No 116
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=68.55 E-value=4 Score=40.26 Aligned_cols=37 Identities=19% Similarity=0.358 Sum_probs=28.7
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 379 ~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
..+++..|||+|||.+|+.+|..+.+. | ..++.++|+
T Consensus 19 ~~m~~~dVvIIGgGiaGls~A~~La~~-----G------~~~V~vlE~ 55 (448)
T 3axb_A 19 SHMPRFDYVVVGAGVVGLAAAYYLKVW-----S------GGSVLVVDA 55 (448)
T ss_dssp --CCEEEEEEECCSHHHHHHHHHHHHH-----H------CSCEEEEES
T ss_pred ccCCcCCEEEECcCHHHHHHHHHHHhC-----C------CCcEEEEcc
Confidence 345667899999999999999988654 4 136999998
No 117
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=68.50 E-value=7.7 Score=38.19 Aligned_cols=84 Identities=10% Similarity=-0.009 Sum_probs=53.4
Q ss_pred eEEeeCCCccHHHHHHHHcCCCceeccCcc---hHHHHHHHHHHHHHHH-------------------hCCCCCCceEEE
Q 012532 331 IQFEDFANHNAFDLLEKYGTTHLVFNDDIQ---GTASVVLAGLISAMKF-------------------LGGSLADQRFLF 388 (461)
Q Consensus 331 IqfEDF~~~nAf~lL~rYr~~~~~FNDDIQ---GTaaV~LAgllaAlrv-------------------~g~~L~d~rivf 388 (461)
|+.--.+..|- ++-.--+..+.+.|---. .+|=-+++.+|+..|- .+..|.+.++.|
T Consensus 73 I~~~~~G~d~i-d~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgI 151 (331)
T 1xdw_A 73 ILTRTAGTDHI-DKEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTVGV 151 (331)
T ss_dssp EEESSSCCTTB-CHHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEEEE
T ss_pred EEEcccccccc-CHHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccCcCccCCCCCEEEE
Confidence 55555544442 111112345666665332 3445578888887761 234688899999
Q ss_pred eCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 389 LGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 389 ~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+|.|..|..+|+.+... |+ +++.+|+.
T Consensus 152 iG~G~IG~~~A~~l~~~-----G~-------~V~~~d~~ 178 (331)
T 1xdw_A 152 VGLGRIGRVAAQIFHGM-----GA-------TVIGEDVF 178 (331)
T ss_dssp ECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred ECcCHHHHHHHHHHHHC-----CC-------EEEEECCC
Confidence 99999999999988532 54 47777764
No 118
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=68.32 E-value=3.2 Score=45.30 Aligned_cols=38 Identities=29% Similarity=0.454 Sum_probs=33.0
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 380 ~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
+|++.||+++|||..|.-+|+.|+.+ |+ .+|.++|.+=
T Consensus 14 kL~~s~VlVVGaGGLGsevak~La~a-----GV------G~ItlvD~D~ 51 (640)
T 1y8q_B 14 AVAGGRVLVVGAGGIGCELLKNLVLT-----GF------SHIDLIDLDT 51 (640)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEEECCB
T ss_pred HHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEecCCE
Confidence 46789999999999999999999876 76 5899999763
No 119
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=68.20 E-value=4.8 Score=38.10 Aligned_cols=32 Identities=25% Similarity=0.301 Sum_probs=26.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.||.|+|+|..|.+||..++.+ |. +++++|.+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~-----G~-------~V~l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH-----GF-------AVTAYDIN 36 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCC
Confidence 6899999999999999988653 64 58888864
No 120
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=68.20 E-value=4.3 Score=39.93 Aligned_cols=38 Identities=13% Similarity=0.290 Sum_probs=29.5
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCc
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GL 429 (461)
+..+|||+|||.||+..|..|... |.+ .+|.++|+..-
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~-----g~~-----~~V~lie~~~~ 45 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQN-----GFE-----GRVLVIGREPE 45 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-----TCC-----SCEEEEESSSS
T ss_pred CCCcEEEECChHHHHHHHHHHHcc-----CcC-----CCEEEEecCCC
Confidence 356899999999999999988543 542 36899988643
No 121
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=68.08 E-value=5.3 Score=40.80 Aligned_cols=35 Identities=23% Similarity=0.292 Sum_probs=28.4
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
...+|+|+|||.||+..|..|... |. ++.++|+..
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~-----G~-------~V~v~e~~~ 155 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK-----GY-------EVHVYDRYD 155 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeccC
Confidence 457899999999999999998653 54 588998753
No 122
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=68.03 E-value=5.1 Score=38.32 Aligned_cols=36 Identities=14% Similarity=0.271 Sum_probs=28.5
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
+..|+|+|||.+|+.+|-.+.+. .|. .++.++|+..
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~----~G~------~~V~vlE~~~ 56 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKN----HGI------TNVAVLEKGW 56 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HCC------CCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHh----cCC------CcEEEEeCCC
Confidence 46899999999999999988751 151 2699999876
No 123
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=67.80 E-value=4.6 Score=40.09 Aligned_cols=33 Identities=27% Similarity=0.386 Sum_probs=26.6
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
-.+|.|+|||..|.|||..++.+ |+ ++.++|.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~-----G~-------~V~l~D~~ 38 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSC
T ss_pred CCeEEEECCcHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 36899999999999999888654 76 47888853
No 124
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=67.43 E-value=5.2 Score=31.34 Aligned_cols=35 Identities=23% Similarity=0.306 Sum_probs=26.2
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
...+|+|+|+|..|..+++.+... |. .+++++|++
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~-----g~------~~v~~~~r~ 38 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTS-----SN------YSVTVADHD 38 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHC-----SS------EEEEEEESC
T ss_pred CcCeEEEECCCHHHHHHHHHHHhC-----CC------ceEEEEeCC
Confidence 346899999999999998887542 51 257888764
No 125
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=67.39 E-value=5 Score=39.20 Aligned_cols=36 Identities=25% Similarity=0.296 Sum_probs=27.3
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCc
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GL 429 (461)
+.+|+|+|||.||+..|..|.. .|++ ++.++|+..-
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~-----~G~~------~v~v~E~~~~ 39 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQ-----AGIG------KVTLLESSSE 39 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTCS------EEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh-----CCCC------eEEEEECCCC
Confidence 4689999999999999988854 3652 2778877543
No 126
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=67.16 E-value=2.9 Score=38.67 Aligned_cols=34 Identities=29% Similarity=0.417 Sum_probs=26.2
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
...+|+|+|||.||+..|..+.. .|. ++.++|+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAAR-----ANL-------QPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT-----TTC-------CCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEccC
Confidence 34689999999999999988854 254 47788853
No 127
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=67.14 E-value=4.6 Score=38.24 Aligned_cols=35 Identities=11% Similarity=0.294 Sum_probs=28.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCcc
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GLi 430 (461)
..|+|+|||.+|+.+|-.+.+. |+ ++.++|+....
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~-----G~-------~V~vle~~~~~ 37 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRA-----GL-------NVLMTDAHMPP 37 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHT-----TC-------CEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecCCCC
Confidence 4699999999999999888643 64 58999987543
No 128
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=67.06 E-value=5.2 Score=38.90 Aligned_cols=32 Identities=19% Similarity=0.285 Sum_probs=25.8
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 385 rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
+|+|+|||.||+..|..+.+. |. ++.+++++.
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~-----G~-------~V~vlE~~~ 34 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNA-----GK-------KVLLLEGGE 34 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHHc-----CC-------eEEEEecCC
Confidence 689999999999999988653 64 577887754
No 129
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=66.93 E-value=11 Score=36.83 Aligned_cols=66 Identities=20% Similarity=0.203 Sum_probs=45.6
Q ss_pred CCCceeccCc---chHHHHHHHHHHHHHHHh---------------------CCCCCCceEEEeCcchHHHHHHHHHHHH
Q 012532 350 TTHLVFNDDI---QGTASVVLAGLISAMKFL---------------------GGSLADQRFLFLGAGEAGTGIAELIALE 405 (461)
Q Consensus 350 ~~~~~FNDDI---QGTaaV~LAgllaAlrv~---------------------g~~L~d~rivf~GAGsAgiGIA~li~~~ 405 (461)
..+.+.|--- +.+|=-+++.+|+..|-. +..+.+.++.|+|.|..|..+|+.+...
T Consensus 87 ~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~ 166 (311)
T 2cuk_A 87 RGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVAKRALAF 166 (311)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHHT
T ss_pred CCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHHHHHHHHC
Confidence 3455555432 234445688888876532 4578899999999999999999988532
Q ss_pred HHHhCCCChhhhcCcEEEEcCC
Q 012532 406 ISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 406 m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
|+ +++.+|+.
T Consensus 167 -----G~-------~V~~~d~~ 176 (311)
T 2cuk_A 167 -----GM-------RVVYHART 176 (311)
T ss_dssp -----TC-------EEEEECSS
T ss_pred -----CC-------EEEEECCC
Confidence 54 47777764
No 130
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=66.75 E-value=5.7 Score=38.20 Aligned_cols=34 Identities=15% Similarity=0.329 Sum_probs=27.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCc
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GL 429 (461)
.+|+|+|||.||+..|-.+... |+ ++.++|+.-.
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~-----G~-------~v~v~E~~~~ 36 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKA-----GI-------DNVILERQTP 36 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSCH
T ss_pred ccEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCCC
Confidence 4799999999999999888653 65 5888887653
No 131
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=66.71 E-value=8.3 Score=37.09 Aligned_cols=54 Identities=17% Similarity=0.186 Sum_probs=33.0
Q ss_pred chHHHHHHHHHHHHHH-HhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 360 QGTASVVLAGLISAMK-FLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 360 QGTaaV~LAgllaAlr-v~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
++.....++..+.|++ ..+ . .+++++|.|||..|..++.+... .|. ++++.+|+
T Consensus 143 ~aa~~~~~~ta~~~l~~~~~-~-~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~ 197 (343)
T 2dq4_A 143 VAAILEPFGNAVHTVYAGSG-V-SGKSVLITGAGPIGLMAAMVVRA-----SGA------GPILVSDP 197 (343)
T ss_dssp HHTTHHHHHHHHHHHHSTTC-C-TTSCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECS
T ss_pred HHHhhhHHHHHHHHHHHhCC-C-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 3333334444456665 333 3 88999999998777766655432 353 25777765
No 132
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=66.59 E-value=5.4 Score=41.64 Aligned_cols=36 Identities=25% Similarity=0.269 Sum_probs=29.2
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 381 L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
..+.+|||+|||.||+..|..|.. .|+ +|.++|+..
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~-----~g~-------~v~iiE~~~ 42 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQ-----AGM-------KVLGIEAGE 42 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 345789999999999999998854 364 589999864
No 133
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=66.45 E-value=5.6 Score=36.66 Aligned_cols=33 Identities=18% Similarity=0.231 Sum_probs=26.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.+++|+|||.||+..|..+.. .|. .++.++|++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~------~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATR-----GGV------KNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC------SSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHH-----CCC------CcEEEEcCC
Confidence 369999999999999988754 254 168999985
No 134
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=66.43 E-value=5 Score=40.63 Aligned_cols=38 Identities=16% Similarity=0.288 Sum_probs=28.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.+|+|+|||.||+..|..+.... +.|++. .++.++|+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~--~~G~~~----~~V~v~E~~ 40 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQ--EKGAEI----PELVCFEKQ 40 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHH--HTTCCC----CEEEEECSS
T ss_pred CcEEEECccHHHHHHHHHHHhhh--hcCCCC----CcEEEEEcC
Confidence 48999999999999999987632 136520 138899886
No 135
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=66.15 E-value=4.3 Score=37.84 Aligned_cols=33 Identities=24% Similarity=0.343 Sum_probs=26.6
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
...+|+|+|||.||+..|..+... |+ ++.++|+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~-----g~-------~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARA-----EL-------KPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEec
Confidence 346899999999999999988642 54 5788887
No 136
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=65.92 E-value=12 Score=37.50 Aligned_cols=66 Identities=18% Similarity=0.185 Sum_probs=47.5
Q ss_pred CCceeccCc---chHHHHHHHHHHHHHHHh---------------------CCCCCCceEEEeCcchHHHHHHHHHHHHH
Q 012532 351 THLVFNDDI---QGTASVVLAGLISAMKFL---------------------GGSLADQRFLFLGAGEAGTGIAELIALEI 406 (461)
Q Consensus 351 ~~~~FNDDI---QGTaaV~LAgllaAlrv~---------------------g~~L~d~rivf~GAGsAgiGIA~li~~~m 406 (461)
.+++.|--- +.+|=-+++-+|+..|-. |..|.+.++.|+|.|..|-.+|+.+...
T Consensus 117 gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~- 195 (345)
T 4g2n_A 117 GIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIGRAIATRARGF- 195 (345)
T ss_dssp TCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHHHHHHHHHHTT-
T ss_pred CEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChhHHHHHHHHHHC-
Confidence 455555422 345666788888877642 5678999999999999999999998532
Q ss_pred HHhCCCChhhhcCcEEEEcCCC
Q 012532 407 SKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 407 ~~~~Gls~eeAr~~i~lvDs~G 428 (461)
|+ +++.+|+..
T Consensus 196 ----G~-------~V~~~dr~~ 206 (345)
T 4g2n_A 196 ----GL-------AIHYHNRTR 206 (345)
T ss_dssp ----TC-------EEEEECSSC
T ss_pred ----CC-------EEEEECCCC
Confidence 54 577788754
No 137
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=65.75 E-value=5.7 Score=39.80 Aligned_cols=33 Identities=15% Similarity=0.203 Sum_probs=27.1
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
..++||+|||.||+..|..+.. .|. ++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~-----~g~-------~V~lie~~ 36 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVE-----QGA-------QVTLIERG 36 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 4689999999999999977754 253 69999986
No 138
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=65.55 E-value=6.5 Score=37.47 Aligned_cols=34 Identities=21% Similarity=0.363 Sum_probs=27.7
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
+..|+|+|||.+|+.+|-.+.+ .|. ++.++|+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~-----~G~-------~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILAR-----KGY-------SVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEeccC
Confidence 4589999999999999998853 364 699999864
No 139
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=65.54 E-value=5.7 Score=37.68 Aligned_cols=32 Identities=31% Similarity=0.523 Sum_probs=26.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.+|.|+|+|..|.+||..++.+ |. +++++|.+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~-----G~-------~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT-----GH-------TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 5899999999999999998653 64 58888864
No 140
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=65.49 E-value=5.5 Score=38.39 Aligned_cols=35 Identities=14% Similarity=0.307 Sum_probs=28.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCcc
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GLi 430 (461)
..|||+|||.+|+.+|-.+.+ .|. ++.++|+....
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~-----~G~-------~V~vlE~~~~~ 39 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAE-----RGH-------RVLVLERHTFF 39 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSCTT
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCCCC
Confidence 579999999999999988864 364 58899987654
No 141
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=65.39 E-value=6 Score=39.07 Aligned_cols=37 Identities=19% Similarity=0.335 Sum_probs=28.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCcc
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GLi 430 (461)
.+|||+|||.||+..|..|... |.. .+|.++|+..-.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~-----g~~-----~~V~li~~~~~~ 39 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAE-----GFE-----GRISLIGDEPHL 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TCC-----SEEEEEECSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHcc-----CcC-----CeEEEEECCCCC
Confidence 4899999999999999988543 542 368999886543
No 142
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=65.36 E-value=19 Score=36.73 Aligned_cols=66 Identities=20% Similarity=0.263 Sum_probs=49.5
Q ss_pred CCCceeccCc---chHHHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHH
Q 012532 350 TTHLVFNDDI---QGTASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISK 408 (461)
Q Consensus 350 ~~~~~FNDDI---QGTaaV~LAgllaAlrv------------------~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~ 408 (461)
..+++||--- +.+|=-++|.+|+..|- .+..|.+.++.|+|-|..|..+|+.+...
T Consensus 91 ~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~~~~el~gktlGiIGlG~IG~~vA~~l~~~--- 167 (404)
T 1sc6_A 91 RGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEARGKKLGIIGYGHIGTQLGILAESL--- 167 (404)
T ss_dssp TTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCSTTCEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccCCCccccCCCEEEEEeECHHHHHHHHHHHHC---
Confidence 4677777543 34555678888888763 25679999999999999999999988542
Q ss_pred hCCCChhhhcCcEEEEcCC
Q 012532 409 QTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 409 ~~Gls~eeAr~~i~lvDs~ 427 (461)
|+ +++.+|+.
T Consensus 168 --G~-------~V~~~d~~ 177 (404)
T 1sc6_A 168 --GM-------YVYFYDIE 177 (404)
T ss_dssp --TC-------EEEEECSS
T ss_pred --CC-------EEEEEcCC
Confidence 64 57778864
No 143
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=65.02 E-value=7.3 Score=32.98 Aligned_cols=34 Identities=6% Similarity=0.119 Sum_probs=26.7
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
...+++|+|+|..|..+|+.+... |. ++.++|++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~-----g~-------~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQR-----GQ-------NVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEECC
Confidence 456899999999999999988542 53 57888874
No 144
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=64.71 E-value=5.8 Score=39.45 Aligned_cols=37 Identities=19% Similarity=0.342 Sum_probs=28.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCc
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GL 429 (461)
.+|||+|||.||+..|..+...+.. | -+|.++|+.--
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~--g-------~~Vtlie~~~~ 41 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGS--G-------HEVTLISANDY 41 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGG--G-------SEEEEECSSSE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCC--c-------CEEEEEeCCCC
Confidence 5899999999999999998764321 3 36888887653
No 145
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=64.69 E-value=6.3 Score=35.73 Aligned_cols=33 Identities=24% Similarity=0.380 Sum_probs=26.5
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+..|+|+|||.||+..|..+... |+ ++.++++.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~-----g~-------~v~lie~~ 35 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQK-----GV-------RVGLLTQS 35 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEecC
Confidence 46799999999999999887542 54 58888875
No 146
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=64.54 E-value=7.8 Score=37.36 Aligned_cols=48 Identities=13% Similarity=0.102 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 366 VLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 366 ~LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
.++..+.|++..+ - .+++++|.|||..|..++.+... .|. ++++.+|+
T Consensus 153 ~~~ta~~~l~~~~-~-~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~ 200 (348)
T 2d8a_A 153 PLGNAVDTVLAGP-I-SGKSVLITGAGPLGLLGIAVAKA-----SGA------YPVIVSEP 200 (348)
T ss_dssp HHHHHHHHHTTSC-C-TTCCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECS
T ss_pred HHHHHHHHHHhcC-C-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 3444455664333 3 88999999998888777765532 253 25776664
No 147
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=64.47 E-value=8.2 Score=40.21 Aligned_cols=25 Identities=32% Similarity=0.426 Sum_probs=14.6
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHH
Q 012532 380 SLADQRFLFLGAGEAGTGIAELIAL 404 (461)
Q Consensus 380 ~L~d~rivf~GAGsAgiGIA~li~~ 404 (461)
++++.++||.|||.+|.++|..+..
T Consensus 361 ~l~~k~vlV~GaGGig~aia~~L~~ 385 (523)
T 2o7s_A 361 PLASKTVVVIGAGGAGKALAYGAKE 385 (523)
T ss_dssp -----CEEEECCSHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHH
Confidence 5778899999998666666655543
No 148
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=64.45 E-value=6.9 Score=39.03 Aligned_cols=34 Identities=21% Similarity=0.322 Sum_probs=27.6
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
+.+|+|+|||.||+..|..+... |. ++.++|+..
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~-----g~-------~V~liE~~~ 39 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQL-----GF-------KTTCIEKRG 39 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeCCC
Confidence 45799999999999999887643 54 689999873
No 149
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=64.31 E-value=11 Score=37.04 Aligned_cols=66 Identities=15% Similarity=0.132 Sum_probs=47.3
Q ss_pred CCCceeccCcc---hHHHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHH
Q 012532 350 TTHLVFNDDIQ---GTASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISK 408 (461)
Q Consensus 350 ~~~~~FNDDIQ---GTaaV~LAgllaAlrv------------------~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~ 408 (461)
..+.+.|---- .+|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+...
T Consensus 92 ~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~--- 168 (333)
T 1j4a_A 92 LGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQVFMQIMEGF--- 168 (333)
T ss_dssp TTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBCCGGGSEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCCcccccCCCCEEEEEccCHHHHHHHHHHHHC---
Confidence 46777775332 3444578888887762 23568899999999999999999988632
Q ss_pred hCCCChhhhcCcEEEEcCC
Q 012532 409 QTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 409 ~~Gls~eeAr~~i~lvDs~ 427 (461)
|+ +++.+|+.
T Consensus 169 --G~-------~V~~~d~~ 178 (333)
T 1j4a_A 169 --GA-------KVITYDIF 178 (333)
T ss_dssp --TC-------EEEEECSS
T ss_pred --CC-------EEEEECCC
Confidence 64 57777764
No 150
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=64.23 E-value=6.7 Score=36.28 Aligned_cols=39 Identities=15% Similarity=0.164 Sum_probs=27.5
Q ss_pred hCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 377 LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 377 ~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
...++...||.|+|+|..|.++|..+... |. +++++|++
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~-----G~-------~V~~~~r~ 51 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADL-----GH-------EVTIGTRD 51 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESC
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 45678889999999999999999988653 53 57888864
No 151
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=64.09 E-value=8 Score=38.21 Aligned_cols=39 Identities=18% Similarity=0.157 Sum_probs=30.2
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCccc
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIV 431 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GLi~ 431 (461)
..+|||+|||.||+..|..+... |.. .+|.++|+..-+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-----g~~-----~~V~lie~~~~~~ 45 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQA-----GYQ-----GLITVVGDEAERP 45 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHH-----TCC-----SCEEEEESSCSCC
T ss_pred CCcEEEECChHHHHHHHHHHHcc-----CCC-----CeEEEEECCCCCc
Confidence 46899999999999999988654 531 3699999876443
No 152
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=64.01 E-value=8.1 Score=40.93 Aligned_cols=37 Identities=11% Similarity=0.266 Sum_probs=30.0
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCc
Q 012532 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (461)
Q Consensus 381 L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GL 429 (461)
+++..|+|+|||.||+..|-.|.. .|+ ++.++|+.-.
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar-----~G~-------~V~LiEr~~~ 57 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHK-----LGH-------DVTIYERSAF 57 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHc-----CCC-------CEEEEcCCCC
Confidence 567899999999999999987754 364 6899998843
No 153
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=63.96 E-value=5.9 Score=40.02 Aligned_cols=34 Identities=24% Similarity=0.343 Sum_probs=27.1
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
+.+++|+|||.||+..|..+.. .|. ++.++|++.
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~-----~G~-------~V~liEk~~ 58 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQ-----LGM-------KVAVVEKRS 58 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEecCC
Confidence 4689999999999999988754 264 589999754
No 154
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=63.94 E-value=13 Score=36.83 Aligned_cols=55 Identities=29% Similarity=0.334 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHH----------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEc
Q 012532 362 TASVVLAGLISAMKF----------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVD 425 (461)
Q Consensus 362 TaaV~LAgllaAlrv----------------~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvD 425 (461)
+|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+... |+ +++.+|
T Consensus 103 vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d 170 (324)
T 3hg7_A 103 MSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHF-----GM-------KVLGVS 170 (324)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEC
T ss_pred HHHHHHHHHHHHHhChHHHHHHHhhCCCcCCCCcccccceEEEEEECHHHHHHHHHHHhC-----CC-------EEEEEc
Confidence 444567777777663 35679999999999999999999998543 64 577777
Q ss_pred CCC
Q 012532 426 SKG 428 (461)
Q Consensus 426 s~G 428 (461)
+..
T Consensus 171 r~~ 173 (324)
T 3hg7_A 171 RSG 173 (324)
T ss_dssp SSC
T ss_pred CCh
Confidence 654
No 155
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=63.79 E-value=5.1 Score=39.64 Aligned_cols=38 Identities=13% Similarity=0.253 Sum_probs=28.1
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhc-CcEEEEcCCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETR-KKIWLVDSKG 428 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr-~~i~lvDs~G 428 (461)
...|||+|||.||+..|..+... |. +.. -++.++|+..
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~-----g~---~~~~~~v~liE~~~ 68 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQER-----AQ---AQGALEVLFLDKQG 68 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHH-----HH---HHCCCCEEEEESCS
T ss_pred cCCEEEECCCHHHHHHHHHHHhc-----cc---ccCcccEEEEecCC
Confidence 34799999999999999998764 30 000 3688898765
No 156
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=63.78 E-value=5.6 Score=39.40 Aligned_cols=37 Identities=27% Similarity=0.414 Sum_probs=28.1
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCcc
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GLi 430 (461)
+.-||||+|||.||+..|+.| ...| .+|.++|+.--+
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L-----~~~~-------~~itlie~~~~~ 44 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAA-----LGKC-------DDITMINSEKYL 44 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHH-----TTTC-------SCEEEECSSSSC
T ss_pred CCCCEEEEcCcHHHHHHHHHH-----hCCC-------CEEEEEECCCCC
Confidence 345899999999999999998 1123 369999886543
No 157
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=63.44 E-value=16 Score=36.38 Aligned_cols=47 Identities=15% Similarity=0.206 Sum_probs=32.5
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 368 AgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
+|.+++.... +....++.|+|+|..|-.+++.+... .++ ++|+++|+
T Consensus 116 ~s~laa~~la--~~~~~~v~iIGaG~~a~~~a~al~~~----~~~------~~V~V~~r 162 (350)
T 1x7d_A 116 TSLMAAQALA--RPNARKMALIGNGAQSEFQALAFHKH----LGI------EEIVAYDT 162 (350)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSTTHHHHHHHHHHH----SCC------CEEEEECS
T ss_pred HHHHHHHHhc--cccCCeEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcC
Confidence 3455665553 34668999999999999988776543 232 46887776
No 158
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=63.28 E-value=14 Score=36.59 Aligned_cols=39 Identities=18% Similarity=0.116 Sum_probs=31.0
Q ss_pred CCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 378 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 378 g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+..|.+.+|.|+|.|..|..+|+.+..+ .|+ +++.+|++
T Consensus 158 ~~~l~g~~vgIIG~G~IG~~vA~~l~~~----~G~-------~V~~~d~~ 196 (348)
T 2w2k_A 158 AHNPRGHVLGAVGLGAIQKEIARKAVHG----LGM-------KLVYYDVA 196 (348)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEECSS
T ss_pred CcCCCCCEEEEEEECHHHHHHHHHHHHh----cCC-------EEEEECCC
Confidence 5679999999999999999999988522 254 57777764
No 159
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=63.14 E-value=5.7 Score=39.53 Aligned_cols=37 Identities=19% Similarity=0.350 Sum_probs=28.7
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
...+|+|+|||.||+..|..+.. .|.. .++.++|++.
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~-----~G~~-----~~V~v~E~~~ 41 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLA-----EKAF-----DQVTLFERRG 41 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT-----TTCC-----SEEEEECSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHh-----cCCC-----CCeEEEecCC
Confidence 35689999999999999998864 3642 2688999863
No 160
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=63.12 E-value=6.2 Score=40.19 Aligned_cols=34 Identities=21% Similarity=0.476 Sum_probs=27.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
.-.|+|+|||.+|+++|..+.. .|+ ++.++|+..
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~-----~G~-------~V~llE~~~ 36 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAG-----RGL-------SVLMLEAQD 36 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEECCC
Confidence 4579999999999999998864 375 588999864
No 161
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=63.08 E-value=8 Score=37.29 Aligned_cols=33 Identities=24% Similarity=0.538 Sum_probs=27.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.||.|+|||+.|.++|..++.. |+. .++++|.+
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~-----g~~------~V~l~D~~ 37 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD-----NLA------DVVLFDIA 37 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC------EEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCc------eEEEEeCC
Confidence 5899999999999999998654 541 48999975
No 162
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=62.98 E-value=6.5 Score=39.49 Aligned_cols=34 Identities=18% Similarity=0.268 Sum_probs=26.3
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 385 rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
||||+|||.||+..|..+.+. |. .-+|.++|+..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~-----g~-----~~~V~lie~~~ 35 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL-----DK-----ESDIIIFEKDR 35 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-----CS-----SSCEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-----CC-----CCcEEEEeCCC
Confidence 799999999999999887543 42 13688998754
No 163
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=62.94 E-value=15 Score=36.32 Aligned_cols=67 Identities=24% Similarity=0.355 Sum_probs=47.9
Q ss_pred CCCceeccCc---chHHHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHH
Q 012532 350 TTHLVFNDDI---QGTASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISK 408 (461)
Q Consensus 350 ~~~~~FNDDI---QGTaaV~LAgllaAlrv------------------~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~ 408 (461)
..+++.|--- +.+|=-+++.+|+..|- .+..|.+.++.|+|.|..|-.+|+.+...
T Consensus 83 ~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~~~~~l~gktvGIiGlG~IG~~vA~~l~~~--- 159 (324)
T 3evt_A 83 AGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPMTTSTLTGQQLLIYGTGQIGQSLAAKASAL--- 159 (324)
T ss_dssp TTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSSCCCCSTTCEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCCCCccccCCeEEEECcCHHHHHHHHHHHhC---
Confidence 4677777643 23444567777777642 25679999999999999999999988543
Q ss_pred hCCCChhhhcCcEEEEcCCC
Q 012532 409 QTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 409 ~~Gls~eeAr~~i~lvDs~G 428 (461)
|+ +++.+|+..
T Consensus 160 --G~-------~V~~~dr~~ 170 (324)
T 3evt_A 160 --GM-------HVIGVNTTG 170 (324)
T ss_dssp --TC-------EEEEEESSC
T ss_pred --CC-------EEEEECCCc
Confidence 65 577777643
No 164
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=62.94 E-value=16 Score=37.68 Aligned_cols=67 Identities=19% Similarity=0.291 Sum_probs=50.4
Q ss_pred cCCCceeccCc---chHHHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHH
Q 012532 349 GTTHLVFNDDI---QGTASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEIS 407 (461)
Q Consensus 349 r~~~~~FNDDI---QGTaaV~LAgllaAlrv------------------~g~~L~d~rivf~GAGsAgiGIA~li~~~m~ 407 (461)
+..+++||--- ..+|=-++|.+|+..|- .+..|.+.++.|+|.|..|..+|+.+...
T Consensus 101 ~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el~gktvGIIGlG~IG~~vA~~l~~~-- 178 (416)
T 3k5p_A 101 KRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVRGKTLGIVGYGNIGSQVGNLAESL-- 178 (416)
T ss_dssp HTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCSTTCEEEEECCSHHHHHHHHHHHHT--
T ss_pred hcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCCCCccCCCCEEEEEeeCHHHHHHHHHHHHC--
Confidence 35688888643 34566678888888753 24578999999999999999999987543
Q ss_pred HhCCCChhhhcCcEEEEcCC
Q 012532 408 KQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 408 ~~~Gls~eeAr~~i~lvDs~ 427 (461)
|+ +++.+|+.
T Consensus 179 ---G~-------~V~~yd~~ 188 (416)
T 3k5p_A 179 ---GM-------TVRYYDTS 188 (416)
T ss_dssp ---TC-------EEEEECTT
T ss_pred ---CC-------EEEEECCc
Confidence 65 58888864
No 165
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=62.89 E-value=7.9 Score=32.50 Aligned_cols=32 Identities=16% Similarity=0.427 Sum_probs=25.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.+|+|+|+|..|..+|+.+... |. +++++|++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~-----g~-------~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS-----DI-------PLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEECC
Confidence 4789999999999999988642 54 47888864
No 166
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=62.75 E-value=6.5 Score=39.65 Aligned_cols=33 Identities=27% Similarity=0.452 Sum_probs=27.4
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+.+++|+|||.||+..|..+.. .|. ++.++|+.
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~-----~g~-------~V~liE~~ 36 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAA-----FGK-------RVALIESK 36 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CCC-------cEEEEcCC
Confidence 4689999999999999998854 254 69999986
No 167
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=62.57 E-value=6.7 Score=38.83 Aligned_cols=36 Identities=19% Similarity=0.278 Sum_probs=27.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCc
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GL 429 (461)
.+|||+|||.||+..|..+... . .| -+|.++|++--
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~--~-~g-------~~Vtlie~~~~ 38 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNL--M-PD-------LKITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH--C-TT-------CEEEEECSSSE
T ss_pred CCEEEECccHHHHHHHHHHHcC--C-CC-------CeEEEECCCCC
Confidence 5899999999999999988662 1 13 36889988653
No 168
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=62.50 E-value=20 Score=34.58 Aligned_cols=47 Identities=15% Similarity=0.211 Sum_probs=32.0
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 368 AgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
++.+++... .+....+|.|+|+|..|..+|+.+... .|+ ++++++|+
T Consensus 122 ~~~la~~~l--a~~~~~~igiIG~G~~g~~~a~~l~~~----~g~------~~V~v~dr 168 (312)
T 2i99_A 122 VSAIATKFL--KPPSSEVLCILGAGVQAYSHYEIFTEQ----FSF------KEVRIWNR 168 (312)
T ss_dssp HHHHHHHHH--SCTTCCEEEEECCSHHHHHHHHHHHHH----CCC------SEEEEECS
T ss_pred HHHHHHHHh--CCCCCcEEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcC
Confidence 344555333 245677999999999999999888654 243 35777765
No 169
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=62.32 E-value=5.5 Score=40.12 Aligned_cols=35 Identities=20% Similarity=0.294 Sum_probs=28.1
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
++.++||+|||.||+..|..+.. .|. ++.++|+.-
T Consensus 5 ~~~dvvIIG~G~aG~~aA~~l~~-----~g~-------~V~lie~~~ 39 (464)
T 2eq6_A 5 KTYDLIVIGTGPGGYHAAIRAAQ-----LGL-------KVLAVEAGE 39 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 35689999999999999988854 253 699999864
No 170
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=62.21 E-value=13 Score=36.96 Aligned_cols=36 Identities=19% Similarity=0.305 Sum_probs=28.4
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 380 ~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.+...+++|+|+|..|..+|+.+... |. +++.+|++
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~-----Ga-------~V~~~d~~ 200 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGM-----GA-------TVTVLDIN 200 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEeCC
Confidence 47889999999999999999887542 53 47777763
No 171
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=62.15 E-value=6 Score=41.34 Aligned_cols=35 Identities=14% Similarity=0.210 Sum_probs=28.6
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
.+.+|||+|||.||+..|..|.. .|+ +|.++|+..
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~ 54 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRS-----QGL-------TVRAFEAAS 54 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECchHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 35689999999999999998854 364 589999864
No 172
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=62.03 E-value=7.3 Score=39.38 Aligned_cols=64 Identities=14% Similarity=0.192 Sum_probs=28.6
Q ss_pred cCcchHHHHHHHHHHHHHHH---hCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCcc
Q 012532 357 DDIQGTASVVLAGLISAMKF---LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (461)
Q Consensus 357 DDIQGTaaV~LAgllaAlrv---~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GLi 430 (461)
...+|-|+++.--.+.--.. ...+....+|||+|||.||+..|..+.... .| .++.++|+....
T Consensus 7 ~~~~~~~~~~~np~~g~~~~~~~~~~~~~~~dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~~ 73 (480)
T 3cgb_A 7 HHHHGMASMTGGQQMGRTLYDDDDKDRWGSMNYVIIGGDAAGMSAAMQIVRND---EN-------ANVVTLEKGEIY 73 (480)
T ss_dssp ------------------------------CEEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEECSSSCC
T ss_pred ccccccccccchhhhcccccCCCCcCccccceEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCCCC
Confidence 34567777665544432211 111222358999999999999999886531 13 369999987543
No 173
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=61.92 E-value=6.2 Score=36.32 Aligned_cols=32 Identities=25% Similarity=0.374 Sum_probs=24.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.+|+|+|||.||+..|..+.. .|. ++.+++.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~li~~~ 33 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSAR-----KGI-------RTGLMGER 33 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 479999999999999987753 254 47777653
No 174
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=61.92 E-value=8.9 Score=37.43 Aligned_cols=35 Identities=20% Similarity=0.397 Sum_probs=28.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
.||.|+|||..|.|+|..++.. |+ -..++|+|.+-
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-----g~-----~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-----GI-----ADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhc-----CC-----CCEEEEEcCCc
Confidence 6899999999999999988643 54 25799999753
No 175
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=61.86 E-value=14 Score=36.64 Aligned_cols=65 Identities=22% Similarity=0.232 Sum_probs=45.5
Q ss_pred CCceeccCc---chHHHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHHh
Q 012532 351 THLVFNDDI---QGTASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQ 409 (461)
Q Consensus 351 ~~~~FNDDI---QGTaaV~LAgllaAlrv------------------~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~ 409 (461)
.+++.|--- +.+|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+...
T Consensus 112 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~l~g~tvgIIGlG~IG~~vA~~l~~~---- 187 (335)
T 2g76_A 112 GILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQSF---- 187 (335)
T ss_dssp TCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCCTTCEEEEECCSHHHHHHHHHHHTT----
T ss_pred CeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccCCCCcCCCcCEEEEEeECHHHHHHHHHHHHC----
Confidence 455555432 23455568888887664 25679999999999999999999988532
Q ss_pred CCCChhhhcCcEEEEcCC
Q 012532 410 TNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 410 ~Gls~eeAr~~i~lvDs~ 427 (461)
|+ +++.+|++
T Consensus 188 -G~-------~V~~~d~~ 197 (335)
T 2g76_A 188 -GM-------KTIGYDPI 197 (335)
T ss_dssp -TC-------EEEEECSS
T ss_pred -CC-------EEEEECCC
Confidence 53 46777753
No 176
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=61.73 E-value=16 Score=35.64 Aligned_cols=38 Identities=16% Similarity=0.235 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHH
Q 012532 366 VLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIA 403 (461)
Q Consensus 366 ~LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~ 403 (461)
+....+.|++..+....+++++|.|||..|..++.+..
T Consensus 171 ~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~ 208 (366)
T 1yqd_A 171 AGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAK 208 (366)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHH
T ss_pred hHHHHHHHHHhcCcCCCCCEEEEECCCHHHHHHHHHHH
Confidence 33344566766555547899999999987777766553
No 177
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=61.66 E-value=7 Score=36.30 Aligned_cols=31 Identities=26% Similarity=0.410 Sum_probs=24.2
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 385 rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
-|+|+|||+||+-.|..+.. .|+ ++.++|+.
T Consensus 8 DvvIIG~GpAGl~aA~~l~~-----~g~-------~V~liE~~ 38 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASR-----ANL-------KTVMIERG 38 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 57999999999999876643 364 58888864
No 178
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=61.66 E-value=6.6 Score=36.94 Aligned_cols=34 Identities=18% Similarity=0.269 Sum_probs=26.7
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
...+++|+|||.||+..|..+... |+ ++.++|+.
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 46 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARA-----QL-------APLVFEGT 46 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHT-----TC-------CCEEECCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEecC
Confidence 456899999999999999988542 54 47788854
No 179
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=61.56 E-value=6.6 Score=39.56 Aligned_cols=35 Identities=23% Similarity=0.315 Sum_probs=27.4
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCc
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GL 429 (461)
+.+|+|+|||.||+..|..+.. .|. ++.++|+..-
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~-----~G~-------~V~llEk~~~ 61 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGK-----RGR-------RVLVIDHARA 61 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCCC
Confidence 4689999999999999987754 264 5889998654
No 180
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=61.47 E-value=7.1 Score=39.10 Aligned_cols=34 Identities=24% Similarity=0.287 Sum_probs=27.2
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
+.+++|+|||.||+..|..+.. .|. ++.++|+..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~-----~g~-------~V~lie~~~ 35 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQ-----LGM-------KTACVEKRG 35 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 3579999999999999977754 254 699999873
No 181
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=61.40 E-value=12 Score=36.83 Aligned_cols=66 Identities=18% Similarity=0.153 Sum_probs=46.7
Q ss_pred CCCceeccCcch---HHHHHHHHHHHHHHH-------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHH
Q 012532 350 TTHLVFNDDIQG---TASVVLAGLISAMKF-------------------LGGSLADQRFLFLGAGEAGTGIAELIALEIS 407 (461)
Q Consensus 350 ~~~~~FNDDIQG---TaaV~LAgllaAlrv-------------------~g~~L~d~rivf~GAGsAgiGIA~li~~~m~ 407 (461)
..+.+.|---.. +|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+...
T Consensus 90 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~-- 167 (333)
T 1dxy_A 90 YGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVAIKLFKGF-- 167 (333)
T ss_dssp TTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEEEEECCSHHHHHHHHHHHHT--
T ss_pred CCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccCCCccCCCCCEEEEECcCHHHHHHHHHHHHC--
Confidence 456666643323 444468888877651 24578999999999999999999988532
Q ss_pred HhCCCChhhhcCcEEEEcCC
Q 012532 408 KQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 408 ~~~Gls~eeAr~~i~lvDs~ 427 (461)
|+ +++.+|++
T Consensus 168 ---G~-------~V~~~d~~ 177 (333)
T 1dxy_A 168 ---GA-------KVIAYDPY 177 (333)
T ss_dssp ---TC-------EEEEECSS
T ss_pred ---CC-------EEEEECCC
Confidence 64 47777764
No 182
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=61.38 E-value=6.9 Score=36.99 Aligned_cols=36 Identities=22% Similarity=0.251 Sum_probs=28.7
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 380 ~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+|++.++||+|+|..|..-|+.|..+ |. ++.++|.+
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~-----GA-------~VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQE-----GA-------AITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGG-----CC-------CEEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEECCC
Confidence 57899999999999999999888654 42 47777753
No 183
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=61.21 E-value=13 Score=35.81 Aligned_cols=58 Identities=16% Similarity=0.094 Sum_probs=35.4
Q ss_pred cCcchHHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 357 DDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 357 DDIQGTaaV~LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
++.++.....++..+.|++..+. -.+++++|+|||..|...+.+.. + .|. ++|+.+|+
T Consensus 155 s~~~aa~~~~~~ta~~~l~~~~~-~~g~~VlV~GaG~vG~~aiqlak-~----~Ga------~~Vi~~~~ 212 (363)
T 3m6i_A 155 SYENGAMLEPLSVALAGLQRAGV-RLGDPVLICGAGPIGLITMLCAK-A----AGA------CPLVITDI 212 (363)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTC-CTTCCEEEECCSHHHHHHHHHHH-H----TTC------CSEEEEES
T ss_pred CHHHHHhhhHHHHHHHHHHHcCC-CCCCEEEEECCCHHHHHHHHHHH-H----cCC------CEEEEECC
Confidence 34445444455556667755543 35689999999877776654442 2 364 35777774
No 184
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=61.12 E-value=13 Score=36.63 Aligned_cols=66 Identities=11% Similarity=0.072 Sum_probs=46.9
Q ss_pred CCCceeccC----cchHHHHHHHHHHHHHHH----------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHHh
Q 012532 350 TTHLVFNDD----IQGTASVVLAGLISAMKF----------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQ 409 (461)
Q Consensus 350 ~~~~~FNDD----IQGTaaV~LAgllaAlrv----------------~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~ 409 (461)
..+++.|-- -+..|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+...
T Consensus 86 ~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIiG~G~IG~~vA~~l~~~---- 161 (315)
T 3pp8_A 86 ASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTREEFSVGIMGAGVLGAKVAESLQAW---- 161 (315)
T ss_dssp TTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCCEEEECCSHHHHHHHHHHHTT----
T ss_pred CCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCCCCCCcCCCEEEEEeeCHHHHHHHHHHHHC----
Confidence 356665521 144566678888887763 24678999999999999999999988532
Q ss_pred CCCChhhhcCcEEEEcCC
Q 012532 410 TNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 410 ~Gls~eeAr~~i~lvDs~ 427 (461)
|+ +++.+|+.
T Consensus 162 -G~-------~V~~~dr~ 171 (315)
T 3pp8_A 162 -GF-------PLRCWSRS 171 (315)
T ss_dssp -TC-------CEEEEESS
T ss_pred -CC-------EEEEEcCC
Confidence 65 47777764
No 185
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=61.00 E-value=8 Score=37.85 Aligned_cols=37 Identities=24% Similarity=0.327 Sum_probs=29.2
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCcc
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GLi 430 (461)
+..|||+|||.||+..|-.+.+. |. +++.++|+....
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~-----G~------~~V~vlE~~~~~ 42 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARR-----GY------TNVTVLDPYPVP 42 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHT-----TC------CCEEEEESSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHc-----CC------CcEEEEeCCCCC
Confidence 45799999999999999888543 64 269999987654
No 186
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=60.86 E-value=13 Score=37.15 Aligned_cols=87 Identities=16% Similarity=0.211 Sum_probs=55.4
Q ss_pred eeEEeeCCCccH-HHHHHHHcCCCceeccCc---chHHHHHHHHHHHHHHH--------------------hCCCCCCce
Q 012532 330 LIQFEDFANHNA-FDLLEKYGTTHLVFNDDI---QGTASVVLAGLISAMKF--------------------LGGSLADQR 385 (461)
Q Consensus 330 lIqfEDF~~~nA-f~lL~rYr~~~~~FNDDI---QGTaaV~LAgllaAlrv--------------------~g~~L~d~r 385 (461)
+|+.-..+..|- ...+.+.+..+.+.|--- ..+|=-+++.+|+..|- .+..|.+.+
T Consensus 87 ~I~~~~~G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~g~t 166 (364)
T 2j6i_A 87 LVVVAGVGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKT 166 (364)
T ss_dssp EEEESSSCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCSTTCE
T ss_pred EEEECCcccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCcccCCCCE
Confidence 366555555542 222333222566666422 34455578888887762 356899999
Q ss_pred EEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 386 FLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 386 ivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+.|+|.|..|..+|+.+... |+ ++++.+|+.
T Consensus 167 vgIIG~G~IG~~vA~~l~~~-----G~------~~V~~~d~~ 197 (364)
T 2j6i_A 167 IATIGAGRIGYRVLERLVPF-----NP------KELLYYDYQ 197 (364)
T ss_dssp EEEECCSHHHHHHHHHHGGG-----CC------SEEEEECSS
T ss_pred EEEECcCHHHHHHHHHHHhC-----CC------cEEEEECCC
Confidence 99999999999999988532 54 127777754
No 187
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=60.86 E-value=5.7 Score=40.10 Aligned_cols=37 Identities=22% Similarity=0.385 Sum_probs=26.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCc
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GL 429 (461)
.+|||+|||.||...|-.|..... .|+ +|.++|+.-.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~--~G~-------~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFD--DRI-------DVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHG--GGS-------EEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcC--CCC-------EEEEEecCCC
Confidence 479999999999999999876431 254 5888887643
No 188
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=60.79 E-value=7.7 Score=38.10 Aligned_cols=33 Identities=24% Similarity=0.438 Sum_probs=27.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.||.|+|||+.|.++|.+++.. |+- .++++|.+
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~-----g~~------~V~L~D~~ 42 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR-----ELA------DVVLYDVV 42 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC------EEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC------eEEEEECC
Confidence 5899999999999999998753 541 39999975
No 189
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=60.76 E-value=12 Score=37.35 Aligned_cols=60 Identities=20% Similarity=0.368 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHH---------hCCCCCCceEEEeCcch-HHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCccccCC
Q 012532 365 VVLAGLISAMKF---------LGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSR 434 (461)
Q Consensus 365 V~LAgllaAlrv---------~g~~L~d~rivf~GAGs-AgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GLi~~~R 434 (461)
+|-.|.+-.++- .|.+++..++|++|+|. .|.-+|.++... |. .++++|++..-...|
T Consensus 150 cTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~-----gA-------tVtv~nR~~~~l~~r 217 (320)
T 1edz_A 150 CTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLAND-----GA-------TVYSVDVNNIQKFTR 217 (320)
T ss_dssp HHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTT-----SC-------EEEEECSSEEEEEES
T ss_pred CcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHC-----CC-------EEEEEeCchHHHHhH
Confidence 333444666666 68899999999999996 598888888542 42 489999876555555
Q ss_pred Cc
Q 012532 435 LE 436 (461)
Q Consensus 435 ~~ 436 (461)
.+
T Consensus 218 a~ 219 (320)
T 1edz_A 218 GE 219 (320)
T ss_dssp CC
T ss_pred HH
Confidence 43
No 190
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=60.60 E-value=6.5 Score=39.72 Aligned_cols=35 Identities=29% Similarity=0.416 Sum_probs=28.3
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
.+.+|+|+|||.||+..|..+... |. ++.++|+.-
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~-----g~-------~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASY-----GA-------KTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-----SC-------CEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHC-----CC-------cEEEEeCCC
Confidence 356899999999999999988642 54 699999863
No 191
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=60.54 E-value=21 Score=34.82 Aligned_cols=35 Identities=26% Similarity=0.223 Sum_probs=25.1
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHH
Q 012532 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIAL 404 (461)
Q Consensus 368 AgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~ 404 (461)
++.+++..+.. ....++.|+|+|..|-.+++.+..
T Consensus 112 ~s~laa~~la~--~~~~~v~iIGaG~~a~~~~~al~~ 146 (322)
T 1omo_A 112 AGGIAAKYLAR--KNSSVFGFIGCGTQAYFQLEALRR 146 (322)
T ss_dssp HHHHHHHHHSC--TTCCEEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHhccC--CCCCEEEEEcCcHHHHHHHHHHHH
Confidence 34555554432 356799999999999988887755
No 192
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=60.53 E-value=15 Score=38.66 Aligned_cols=46 Identities=22% Similarity=0.324 Sum_probs=35.4
Q ss_pred cCcchHHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHH
Q 012532 357 DDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALE 405 (461)
Q Consensus 357 DDIQGTaaV~LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~ 405 (461)
+.+.|+......|+ .+.++..+.+.+++|+|.|..|.++|+.+...
T Consensus 234 r~~~~~~~~l~~gw---~r~~~~~l~GktVgIIG~G~IG~~vA~~l~~~ 279 (479)
T 1v8b_A 234 DNVYGCRHSLPDGL---MRATDFLISGKIVVICGYGDVGKGCASSMKGL 279 (479)
T ss_dssp HHHHHHHHHHHHHH---HHHHCCCCTTSEEEEECCSHHHHHHHHHHHHH
T ss_pred hchHhHHHHHhhhh---hhccccccCCCEEEEEeeCHHHHHHHHHHHhC
Confidence 34455555556662 35678899999999999999999999998643
No 193
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=60.52 E-value=7.4 Score=38.16 Aligned_cols=33 Identities=27% Similarity=0.472 Sum_probs=26.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.||.|+|||+.|.++|.+++.. |+- .++|+|.+
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~-----g~~------~v~L~Di~ 37 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK-----NLG------DVVLFDIV 37 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TCC------EEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC------eEEEEeCC
Confidence 4899999999999999888643 551 29999964
No 194
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=60.29 E-value=8.3 Score=37.30 Aligned_cols=32 Identities=16% Similarity=0.204 Sum_probs=25.4
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 385 rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
+|+|+|||.||+..|..|.+. |. ++.++++..
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G~-------~V~vlE~~~ 33 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKA-----GH-------EVEVFERLP 33 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----TC-------EEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHhC-----CC-------ceEEEeCCC
Confidence 689999999999999888653 53 577777753
No 195
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=60.22 E-value=6.8 Score=38.45 Aligned_cols=33 Identities=24% Similarity=0.563 Sum_probs=26.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.||.|+|||+.|.++|.+++.. |+- .++++|.+
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~-----g~~------~V~L~Di~ 47 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQK-----DLG------DVYMFDII 47 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TCC------EEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC------eEEEEECC
Confidence 5899999999999999877542 551 39999975
No 196
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=60.21 E-value=7.6 Score=40.12 Aligned_cols=38 Identities=21% Similarity=0.344 Sum_probs=29.2
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCc
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GL 429 (461)
..+|||+|||.||...|..|..... .|+ +|.++|+.-.
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~--~G~-------~V~liE~~~~ 62 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQ--GTA-------DITLLQAPDI 62 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTT--TSS-------EEEEEECCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcC--CCC-------cEEEEeCCCC
Confidence 4689999999999999999876421 243 6889998643
No 197
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=60.09 E-value=7.3 Score=39.91 Aligned_cols=37 Identities=22% Similarity=0.345 Sum_probs=28.5
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
..+|||+|||.||+..|-.|..... .|+ +|.++|+.-
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~--~G~-------~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQ--QQA-------NITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCC--SSC-------EEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcC--CCC-------EEEEECCCC
Confidence 4689999999999999998865320 254 588999854
No 198
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=59.93 E-value=21 Score=34.87 Aligned_cols=57 Identities=19% Similarity=0.230 Sum_probs=34.8
Q ss_pred CcchHHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 358 DIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 358 DIQGTaaV~LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
+.++.....++..+.|++..+.+ .+++++|.|||..|...+.+.. + .|. ++++.+|+
T Consensus 159 ~~~aal~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~aiqlak-~----~Ga------~~Vi~~~~ 215 (370)
T 4ej6_A 159 PVHGAFCEPLACCLHGVDLSGIK-AGSTVAILGGGVIGLLTVQLAR-L----AGA------TTVILSTR 215 (370)
T ss_dssp TTGGGGHHHHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHH-H----TTC------SEEEEECS
T ss_pred HHHHhhhhHHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHH-H----cCC------CEEEEECC
Confidence 34554444556666677655433 5789999999876666554442 2 364 35777765
No 199
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=59.91 E-value=7.5 Score=39.89 Aligned_cols=35 Identities=20% Similarity=0.248 Sum_probs=28.5
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
.+.+|||+|||.||+..|..+... |. ++.++|+..
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~-----G~-------~V~liE~~~ 76 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAM-----GG-------RQLIVDRWP 76 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 356899999999999999888643 53 689999865
No 200
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=59.87 E-value=9.2 Score=40.81 Aligned_cols=34 Identities=26% Similarity=0.483 Sum_probs=28.1
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
..+|||+|||.||+..|..+... |. ++.++|+..
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~-----G~-------~V~liE~~~ 424 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVR-----GY-------DVVLAEAGR 424 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecCC
Confidence 46899999999999999988654 54 599999863
No 201
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=59.82 E-value=5.6 Score=40.80 Aligned_cols=22 Identities=27% Similarity=0.341 Sum_probs=19.0
Q ss_pred eEEEeCcchHHHHHHHHHHHHH
Q 012532 385 RFLFLGAGEAGTGIAELIALEI 406 (461)
Q Consensus 385 rivf~GAGsAgiGIA~li~~~m 406 (461)
-||++|||.+|+++|-.|.+..
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~ 62 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDAL 62 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHH
T ss_pred cEEEEcccHHHHHHHHHHHhcC
Confidence 4899999999999998886653
No 202
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=59.81 E-value=8.2 Score=39.81 Aligned_cols=35 Identities=17% Similarity=0.260 Sum_probs=28.2
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
.+.+|+|+|||.||+..|..|.+. |+ ++.++|+..
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~-----G~-------~v~iiE~~~ 49 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLREL-----GR-------SVHVIETAG 49 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHhC-----CC-------CEEEEeCCC
Confidence 356899999999999999888643 65 588898764
No 203
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=59.79 E-value=8.4 Score=37.56 Aligned_cols=32 Identities=22% Similarity=0.370 Sum_probs=25.4
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 385 rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
+|+|+|||.||+..|-.|.+. |. ++.++++..
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G~-------~V~vlE~~~ 33 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARN-----GH-------EIIVLEKSA 33 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-----TC-------EEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeCCC
Confidence 699999999999999888653 53 577777753
No 204
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=59.68 E-value=6.6 Score=39.29 Aligned_cols=33 Identities=27% Similarity=0.288 Sum_probs=26.7
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+.+++|+|||.||+..|..+.. .|. ++.++|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~-----~G~-------~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQ-----LGL-------STAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 3579999999999999977754 264 58999986
No 205
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=59.65 E-value=9.4 Score=38.97 Aligned_cols=32 Identities=22% Similarity=0.246 Sum_probs=26.3
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEc
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVD 425 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvD 425 (461)
+.+++|+|||.||+..|..+... .|. ++.++|
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~----~G~-------~V~liE 38 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATL----YGK-------RVAVVD 38 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HCC-------CEEEEE
T ss_pred ccCEEEECCChhHHHHHHHHHHh----cCC-------eEEEEe
Confidence 46899999999999999998761 154 699999
No 206
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=59.57 E-value=7.7 Score=38.66 Aligned_cols=33 Identities=30% Similarity=0.334 Sum_probs=26.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
-+++|+|||.||+..|..+... |. ++.++|+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~-----g~-------~V~lie~~~ 34 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQL-----GM-------KVGVVEKEK 34 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSS
T ss_pred CCEEEECCChhHHHHHHHHHHC-----CC-------eEEEEeCCC
Confidence 4799999999999999777542 54 689999873
No 207
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=59.56 E-value=7.7 Score=38.92 Aligned_cols=34 Identities=21% Similarity=0.218 Sum_probs=27.6
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
+.++||+|||.||+..|..+... |. ++.++|+..
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~-----g~-------~V~liE~~~ 39 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQL-----GF-------KTVCIEKNE 39 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCCC
Confidence 35799999999999999887542 54 699999874
No 208
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=59.50 E-value=7.4 Score=38.74 Aligned_cols=33 Identities=18% Similarity=0.381 Sum_probs=26.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
.+|+|+|||.||+..|-.|... |+ ++.++|++-
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~-----G~-------~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQH-----DV-------DVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHT-----TC-------EEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHC-----CC-------eEEEEcCCC
Confidence 5799999999999999887653 75 588888753
No 209
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=59.46 E-value=16 Score=36.15 Aligned_cols=55 Identities=22% Similarity=0.233 Sum_probs=41.7
Q ss_pred hHHHHHHHHHHHHHHH-------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcE
Q 012532 361 GTASVVLAGLISAMKF-------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKI 421 (461)
Q Consensus 361 GTaaV~LAgllaAlrv-------------------~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i 421 (461)
.+|=-+++-+|+..|- .+..|.+.++.|+|.|..|-.+|+.+... |+ ++
T Consensus 100 ~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~~-----G~-------~V 167 (334)
T 2pi1_A 100 SVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLAF-----GM-------KV 167 (334)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT-----TC-------EE
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCccceeccCceEEEECcCHHHHHHHHHHHHC-----cC-------EE
Confidence 3555668888877652 35678999999999999999999998643 54 47
Q ss_pred EEEcCC
Q 012532 422 WLVDSK 427 (461)
Q Consensus 422 ~lvDs~ 427 (461)
+.+|+.
T Consensus 168 ~~~d~~ 173 (334)
T 2pi1_A 168 LCYDVV 173 (334)
T ss_dssp EEECSS
T ss_pred EEECCC
Confidence 777764
No 210
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=59.37 E-value=15 Score=36.74 Aligned_cols=55 Identities=22% Similarity=0.315 Sum_probs=41.1
Q ss_pred hHHHHHHHHHHHHHHH--------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCc
Q 012532 361 GTASVVLAGLISAMKF--------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKK 420 (461)
Q Consensus 361 GTaaV~LAgllaAlrv--------------------~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~ 420 (461)
.+|=-++|-+|+..|- .+..|.+.+|.|+|.|..|..+|+.+.. .|+ +
T Consensus 129 ~vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~~vA~~l~~-----~G~-------~ 196 (340)
T 4dgs_A 129 DVADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGRALASRAEA-----FGM-------S 196 (340)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------E
T ss_pred hHHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCCHHHHHHHHHHHH-----CCC-------E
Confidence 3555567777777652 2467899999999999999999998853 264 5
Q ss_pred EEEEcCC
Q 012532 421 IWLVDSK 427 (461)
Q Consensus 421 i~lvDs~ 427 (461)
++.+|+.
T Consensus 197 V~~~dr~ 203 (340)
T 4dgs_A 197 VRYWNRS 203 (340)
T ss_dssp EEEECSS
T ss_pred EEEEcCC
Confidence 7777764
No 211
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=59.35 E-value=25 Score=34.06 Aligned_cols=33 Identities=18% Similarity=0.508 Sum_probs=23.9
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+++++|.|||..|..++.++... |. +++.+|+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~-----Ga-------~Vi~~~~~ 213 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY-----GL-------EVWMANRR 213 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH-----TC-------EEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEeCC
Confidence 89999999988777777665432 52 57777763
No 212
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=59.06 E-value=9.3 Score=37.88 Aligned_cols=23 Identities=30% Similarity=0.466 Sum_probs=19.6
Q ss_pred CceEEEeCcchHHHHHHHHHHHH
Q 012532 383 DQRFLFLGAGEAGTGIAELIALE 405 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~ 405 (461)
+--|+|+|||-||+..|..|.++
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~ 32 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQI 32 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhh
Confidence 35699999999999999988654
No 213
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=58.90 E-value=20 Score=34.17 Aligned_cols=39 Identities=10% Similarity=-0.048 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEeCc-chHHHHHHHHHH
Q 012532 365 VVLAGLISAMKFLGGSLADQRFLFLGA-GEAGTGIAELIA 403 (461)
Q Consensus 365 V~LAgllaAlrv~g~~L~d~rivf~GA-GsAgiGIA~li~ 403 (461)
+.++..+.|++.....-.+++++|.|| |..|..++.++.
T Consensus 128 ~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~ 167 (333)
T 1wly_A 128 LKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWAR 167 (333)
T ss_dssp HHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHH
T ss_pred hhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHH
Confidence 344444555653344446789999996 888888877764
No 214
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=58.87 E-value=8.6 Score=39.38 Aligned_cols=37 Identities=27% Similarity=0.411 Sum_probs=29.0
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCcc
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GLi 430 (461)
...+|+|+|||.||+..|..+.. .|+ ++.++|+..-+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liEk~~~~ 127 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELAL-----LGA-------RVVLVEKRIKF 127 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCSSC
T ss_pred CCCCEEEECccHHHHHHHHHHHH-----CCC-------eEEEEEecccc
Confidence 35689999999999999988754 364 58889876443
No 215
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=58.80 E-value=4.2 Score=41.96 Aligned_cols=32 Identities=16% Similarity=0.333 Sum_probs=24.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.||||+|||.||+..|+.|. + .+ -+|.+||.+
T Consensus 43 prVVIIGgG~AGl~~A~~L~----~-~~-------~~VtLId~~ 74 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHID----T-KK-------YNVSIISPR 74 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSC----T-TT-------CEEEEEESS
T ss_pred CCEEEECCcHHHHHHHHHhh----h-CC-------CcEEEECCC
Confidence 48999999999998887652 1 12 269999986
No 216
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=58.69 E-value=7.5 Score=38.75 Aligned_cols=32 Identities=28% Similarity=0.279 Sum_probs=26.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.+++|+|||.||+..|..+.. .|. ++.++|+.
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~-----~g~-------~V~lie~~ 35 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQ-----LGQ-------KVTIVEKG 35 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 469999999999999987754 254 68999986
No 217
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=58.68 E-value=11 Score=36.12 Aligned_cols=34 Identities=15% Similarity=0.394 Sum_probs=27.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.||.|+|||+.|.++|..++.. |+ ...++++|.+
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~-----g~-----~~~V~l~d~~ 35 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQ-----GV-----ADDYVFIDAN 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEcCC
Confidence 3799999999999999988654 54 1468899875
No 218
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=58.61 E-value=5.5 Score=37.73 Aligned_cols=34 Identities=24% Similarity=0.339 Sum_probs=25.7
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 385 rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+|+|+|||.+|+.+|..|.... ..|+ ++.++|+.
T Consensus 3 dV~IIGaG~aGl~~A~~L~~~~--~~G~-------~V~v~Ek~ 36 (342)
T 3qj4_A 3 QVLIVGAGMTGSLCAALLRRQT--SGPL-------YLAVWDKA 36 (342)
T ss_dssp EEEEECCSHHHHHHHHHHHSCC---CCE-------EEEEECSS
T ss_pred cEEEECCcHHHHHHHHHHHhhc--cCCc-------eEEEEECC
Confidence 7999999999999999886410 0253 58888875
No 219
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=58.47 E-value=8.3 Score=39.54 Aligned_cols=36 Identities=22% Similarity=0.390 Sum_probs=28.5
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCc
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GL 429 (461)
.+..|+|+|||.+|+..|-.|.. .|+ ++.++|++--
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~~~ 46 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRL-----GGV-------DVMVLEQLPQ 46 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCCC
Confidence 56789999999999999988864 376 4778887543
No 220
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=58.46 E-value=7.1 Score=35.88 Aligned_cols=31 Identities=16% Similarity=0.275 Sum_probs=23.7
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 385 rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
-|+|+|||+||+-.|..+.. .|+ ++.++|+.
T Consensus 6 DvvIIG~GpAGl~AA~~la~-----~g~-------~v~liE~~ 36 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGR-----SSL-------KPVMYEGF 36 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred cEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 58999999999998866543 364 47788864
No 221
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=58.42 E-value=4.7 Score=42.69 Aligned_cols=39 Identities=18% Similarity=0.316 Sum_probs=32.9
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 379 ~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
.+|+..+|+++|+|..|.-||+.|+.+ |+ ++|.++|.+=
T Consensus 28 ~~L~~~~VlvvG~GGlGseiak~La~a-----GV------g~itlvD~D~ 66 (531)
T 1tt5_A 28 EALESAHVCLINATATGTEILKNLVLP-----GI------GSFTIIDGNQ 66 (531)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECCCB
T ss_pred HHHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEEeCCE
Confidence 356789999999999999999999765 76 6899999754
No 222
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=58.10 E-value=9.8 Score=34.42 Aligned_cols=37 Identities=16% Similarity=0.252 Sum_probs=25.4
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 379 ~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
..+...+|.|+|+|..|..+|..+... |. +++++|++
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~-----g~-------~V~~~~~~ 51 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIA-----GH-------EVTYYGSK 51 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECTT
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEcCC
Confidence 356678999999999999999988643 42 47777654
No 223
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=57.82 E-value=9.4 Score=38.73 Aligned_cols=37 Identities=24% Similarity=0.400 Sum_probs=28.8
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 379 ~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
..++.++|+|+|.|.+|+++|+++.. .|. ++...|.+
T Consensus 5 ~~~~~k~v~viG~G~sG~s~A~~l~~-----~G~-------~V~~~D~~ 41 (451)
T 3lk7_A 5 TTFENKKVLVLGLARSGEAAARLLAK-----LGA-------IVTVNDGK 41 (451)
T ss_dssp CTTTTCEEEEECCTTTHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred hhcCCCEEEEEeeCHHHHHHHHHHHh-----CCC-------EEEEEeCC
Confidence 35678999999999999999888754 364 47777764
No 224
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=57.77 E-value=9.7 Score=36.75 Aligned_cols=33 Identities=24% Similarity=0.317 Sum_probs=25.9
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 385 rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
||.|+|||..|.++|..++. .|+ -..++++|.+
T Consensus 2 kI~VIGaG~vG~~la~~la~-----~g~-----~~eV~L~D~~ 34 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVL-----RGS-----CSELVLVDRD 34 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCC
Confidence 79999999999999977643 254 1369999975
No 225
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=57.53 E-value=18 Score=34.95 Aligned_cols=49 Identities=20% Similarity=0.149 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 366 VLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 366 ~LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
.++..+.|++..+. -..++++|+|||..|...+.+.. + .|. ++++.+|+
T Consensus 156 ~~~ta~~al~~~~~-~~g~~VlV~GaG~vG~~aiqlak-~----~Ga------~~Vi~~~~ 204 (356)
T 1pl8_A 156 PLSVGIHACRRGGV-TLGHKVLVCGAGPIGMVTLLVAK-A----MGA------AQVVVTDL 204 (356)
T ss_dssp HHHHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHH-H----TTC------SEEEEEES
T ss_pred hHHHHHHHHHhcCC-CCCCEEEEECCCHHHHHHHHHHH-H----cCC------CEEEEECC
Confidence 44445556655433 35689999999977776665443 2 353 35776664
No 226
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=57.52 E-value=8.4 Score=39.20 Aligned_cols=33 Identities=27% Similarity=0.418 Sum_probs=27.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
.++||+|||.||+..|..+... |. ++.++|+.-
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~-----g~-------~V~liE~~~ 35 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAARH-----NA-------KVALVEKSR 35 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSS
T ss_pred cCEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEeCCC
Confidence 5799999999999999888642 53 699999874
No 227
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=57.39 E-value=16 Score=35.73 Aligned_cols=64 Identities=22% Similarity=0.234 Sum_probs=44.7
Q ss_pred CCceeccCc---chHHHHHHHHHHHHHHH---------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHH
Q 012532 351 THLVFNDDI---QGTASVVLAGLISAMKF---------------------LGGSLADQRFLFLGAGEAGTGIAELIALEI 406 (461)
Q Consensus 351 ~~~~FNDDI---QGTaaV~LAgllaAlrv---------------------~g~~L~d~rivf~GAGsAgiGIA~li~~~m 406 (461)
.+.+.|--- +.+|=-+++-+|+..|- .+..|.+.++.|+|.|..|-.+|+.+..
T Consensus 90 gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~-- 167 (320)
T 1gdh_A 90 GIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQG-- 167 (320)
T ss_dssp TCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHT--
T ss_pred CcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHHHHHHHHH--
Confidence 455555432 23445577888877653 2356889999999999999999998853
Q ss_pred HHhCCCChhhhcCcEEEEcC
Q 012532 407 SKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 407 ~~~~Gls~eeAr~~i~lvDs 426 (461)
.|. +++.+|+
T Consensus 168 ---~G~-------~V~~~d~ 177 (320)
T 1gdh_A 168 ---FDM-------DIDYFDT 177 (320)
T ss_dssp ---TTC-------EEEEECS
T ss_pred ---CCC-------EEEEECC
Confidence 253 5777876
No 228
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=57.25 E-value=8.7 Score=39.40 Aligned_cols=37 Identities=22% Similarity=0.363 Sum_probs=28.6
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 380 ~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
.-++..|+|+|||.||+..|-.|.. .|+ ++.++|++-
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~~ 44 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRL-----AGV-------EVVVLERLV 44 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESCC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 3456789999999999999988864 376 477888653
No 229
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=57.21 E-value=20 Score=35.85 Aligned_cols=67 Identities=15% Similarity=0.049 Sum_probs=46.9
Q ss_pred CCCceeccCc---chHHHHHHHHHHHHHHH--------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHH
Q 012532 350 TTHLVFNDDI---QGTASVVLAGLISAMKF--------------------LGGSLADQRFLFLGAGEAGTGIAELIALEI 406 (461)
Q Consensus 350 ~~~~~FNDDI---QGTaaV~LAgllaAlrv--------------------~g~~L~d~rivf~GAGsAgiGIA~li~~~m 406 (461)
..+.+.|--- ..+|=-+++-+|+..|- .+..|.+.++.|+|.|..|..+|+.+...
T Consensus 108 ~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~IG~~vA~~l~~~- 186 (351)
T 3jtm_A 108 AGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPF- 186 (351)
T ss_dssp TTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGGG-
T ss_pred cCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEEeCHHHHHHHHHHHHC-
Confidence 3455555322 23455578888887752 25679999999999999999999988532
Q ss_pred HHhCCCChhhhcCcEEEEcCCC
Q 012532 407 SKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 407 ~~~~Gls~eeAr~~i~lvDs~G 428 (461)
|+ +++.+|++.
T Consensus 187 ----G~-------~V~~~dr~~ 197 (351)
T 3jtm_A 187 ----GC-------NLLYHDRLQ 197 (351)
T ss_dssp ----CC-------EEEEECSSC
T ss_pred ----CC-------EEEEeCCCc
Confidence 64 477777653
No 230
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=57.02 E-value=9.5 Score=38.32 Aligned_cols=33 Identities=30% Similarity=0.409 Sum_probs=26.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
..++|+|||.||+..|..+.+ .|+ ++.++|++.
T Consensus 5 ~DVvVIGgG~aGl~aA~~l~~-----~G~-------~V~liEk~~ 37 (466)
T 3l8k_A 5 YDVVVIGAGGAGYHGAFRLAK-----AKY-------NVLMADPKG 37 (466)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECTTS
T ss_pred ceEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEECCC
Confidence 579999999999999988754 364 699999655
No 231
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=56.96 E-value=30 Score=32.88 Aligned_cols=48 Identities=21% Similarity=0.138 Sum_probs=30.7
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 367 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 367 LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
....+.+++..+. -..++++|+|||+.|.-.+.++..+ .| .+++.+|+
T Consensus 149 ~~ta~~~l~~~~~-~~g~~VlV~GaG~~g~~a~~~a~~~----~g-------~~Vi~~~~ 196 (348)
T 4eez_A 149 GVTTYKAIKVSGV-KPGDWQVIFGAGGLGNLAIQYAKNV----FG-------AKVIAVDI 196 (348)
T ss_dssp HHHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHHHT----SC-------CEEEEEES
T ss_pred eeeEEeeecccCC-CCCCEEEEEcCCCccHHHHHHHHHh----CC-------CEEEEEEC
Confidence 3445567776654 4578999999998876555444322 23 35777775
No 232
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=56.82 E-value=16 Score=38.49 Aligned_cols=40 Identities=18% Similarity=0.343 Sum_probs=31.3
Q ss_pred HHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 375 KFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 375 rv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
+..+..+.+.+++|+|+|..|.++|..+... |. +++.+|+
T Consensus 266 r~~~~~l~GktV~IiG~G~IG~~~A~~lka~-----Ga-------~Viv~d~ 305 (494)
T 3ce6_A 266 RGTDALIGGKKVLICGYGDVGKGCAEAMKGQ-----GA-------RVSVTEI 305 (494)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECS
T ss_pred hccCCCCCcCEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEEeC
Confidence 4456788999999999999999999887532 52 4777775
No 233
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=56.77 E-value=8.1 Score=39.40 Aligned_cols=35 Identities=23% Similarity=0.403 Sum_probs=28.0
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCc
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GL 429 (461)
+..|+|+|||.||+..|-.|.. .|+ ++.++|++--
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~-----~G~-------~v~viEr~~~ 39 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLAR-----QGV-------RVLVVERRPG 39 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCCC
Confidence 4689999999999999988854 375 5888887643
No 234
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=56.74 E-value=11 Score=35.65 Aligned_cols=36 Identities=25% Similarity=0.380 Sum_probs=27.6
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
..||.|+|||+.|..+|..+... |.- ..++++|.+-
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~-----g~~-----~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQR-----GIA-----REIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----TCC-----SEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CCC-----CEEEEEeCCh
Confidence 35899999999999999887543 531 3688998763
No 235
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=56.70 E-value=10 Score=38.35 Aligned_cols=33 Identities=18% Similarity=0.364 Sum_probs=27.0
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+..++|+|||.||+..|..+... |. ++.++|+.
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~-----G~-------~V~liEk~ 58 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGAL-----GK-------RVAIAEEY 58 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-----cC-------EEEEEeCC
Confidence 45899999999999999888543 64 68999984
No 236
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=56.69 E-value=11 Score=37.59 Aligned_cols=37 Identities=22% Similarity=0.329 Sum_probs=28.7
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCc
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GL 429 (461)
..+|||+|||.||+..|..+.. .|.+ .+|.++|+..-
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~-----~g~~-----~~V~lie~~~~ 40 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRA-----SGWE-----GNIRLVGDATV 40 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEECSCCS
T ss_pred CCcEEEEcCHHHHHHHHHHHHc-----cCcC-----CCEEEEECCCC
Confidence 4689999999999999998854 3642 36999987643
No 237
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=56.66 E-value=23 Score=34.47 Aligned_cols=55 Identities=22% Similarity=0.221 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHh----------------CCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEc
Q 012532 362 TASVVLAGLISAMKFL----------------GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVD 425 (461)
Q Consensus 362 TaaV~LAgllaAlrv~----------------g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvD 425 (461)
+|=-+++-+|+..|-. ...|.+.++.|+|.|..|..+|+.+... |+ +++.+|
T Consensus 85 vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d 152 (290)
T 3gvx_A 85 VAEHAFALLLAHAKNILENNELMKAGIFRQSPTTLLYGKALGILGYGGIGRRVAHLAKAF-----GM-------RVIAYT 152 (290)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCCTTCEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEEC
T ss_pred HHHHHHHHHHHHHHhhhhhhhHhhhcccccCCceeeecchheeeccCchhHHHHHHHHhh-----Cc-------EEEEEe
Confidence 4445677777766531 1358899999999999999999998654 64 577777
Q ss_pred CCC
Q 012532 426 SKG 428 (461)
Q Consensus 426 s~G 428 (461)
+..
T Consensus 153 r~~ 155 (290)
T 3gvx_A 153 RSS 155 (290)
T ss_dssp SSC
T ss_pred ccc
Confidence 643
No 238
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=56.60 E-value=8 Score=40.35 Aligned_cols=35 Identities=14% Similarity=0.128 Sum_probs=27.9
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
+.+|||+|||.||+..|..|.. +.|+ ++.++|+..
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~----~~G~-------~v~viE~~~ 42 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHH----ELGL-------TTVGFDKAD 42 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH----TTCC-------CEEEEESSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH----cCCC-------CEEEEECCC
Confidence 4689999999999999988852 2364 588999864
No 239
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=56.50 E-value=22 Score=34.63 Aligned_cols=38 Identities=18% Similarity=0.224 Sum_probs=25.3
Q ss_pred CCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 378 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 378 g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
...-.+++|+|+|||..|...+.+... .|. ++|+.+|+
T Consensus 189 ~~~~~g~~VlV~GaG~vG~~a~q~a~~-----~Ga------~~Vi~~~~ 226 (378)
T 3uko_A 189 AKVEPGSNVAIFGLGTVGLAVAEGAKT-----AGA------SRIIGIDI 226 (378)
T ss_dssp TCCCTTCCEEEECCSHHHHHHHHHHHH-----HTC------SCEEEECS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 334467899999999877766655432 264 36887774
No 240
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=56.31 E-value=11 Score=37.65 Aligned_cols=34 Identities=24% Similarity=0.221 Sum_probs=27.4
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
+-.++|+|||.||+..|..+.+. |. ++.++|+.-
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~-----G~-------~V~liEk~~ 36 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQL-----GL-------KTALIEKYK 36 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEEECCB
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-----CC-------EEEEEeCCC
Confidence 35799999999999999888653 54 689999863
No 241
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=56.29 E-value=14 Score=36.51 Aligned_cols=36 Identities=19% Similarity=0.258 Sum_probs=27.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
..+|+|+|||.+|+..|..|.+. |- ..++.++++..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~-----g~-----~~~v~v~E~~~ 39 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERA-----FP-----DLNITLLEAGE 39 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHH-----CT-----TSEEEEECSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHh-----CC-----CCCEEEEECCC
Confidence 46899999999999999988664 51 13688888753
No 242
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=56.22 E-value=8.1 Score=38.71 Aligned_cols=33 Identities=21% Similarity=0.388 Sum_probs=27.0
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+.+++|+|||.||+..|..+.. .|. ++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~-----~g~-------~V~liE~~ 36 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAM-----YGQ-------KCALIEAK 36 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEcCC
Confidence 3589999999999999988754 253 69999986
No 243
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=56.17 E-value=10 Score=38.01 Aligned_cols=33 Identities=24% Similarity=0.307 Sum_probs=27.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
.+++|+|||.||+..|..+... |+ ++.++|+..
T Consensus 6 ~dVvIIGgG~aGl~aA~~l~~~-----G~-------~V~liE~~~ 38 (478)
T 1v59_A 6 HDVVIIGGGPAGYVAAIKAAQL-----GF-------NTACVEKRG 38 (478)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecCC
Confidence 5799999999999999888542 64 699999853
No 244
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=56.15 E-value=9.4 Score=38.68 Aligned_cols=37 Identities=19% Similarity=0.311 Sum_probs=28.5
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
..+|||+|||.||+..|..+... |. ...++.++|+..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~-----g~----~~~~V~lie~~~ 71 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTN-----YG----DANEIVVFDQNS 71 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----HG----GGSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhc-----CC----CCCeEEEEECCC
Confidence 46899999999999999998654 20 113688999765
No 245
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=56.13 E-value=9.8 Score=43.51 Aligned_cols=38 Identities=24% Similarity=0.355 Sum_probs=33.5
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 379 ~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.+|+..+|+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 23 ~rL~~s~VlIvG~GGlGseiak~La~a-----GV------g~itlvD~D 60 (1015)
T 3cmm_A 23 LKMQTSNVLILGLKGLGVEIAKNVVLA-----GV------KSMTVFDPE 60 (1015)
T ss_dssp HHHTTCEEEEECCSHHHHHHHHHHHHH-----CC------SEEEEECCS
T ss_pred HHHhcCEEEEECCChHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 357899999999999999999999876 76 589999975
No 246
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=55.98 E-value=10 Score=37.20 Aligned_cols=33 Identities=27% Similarity=0.386 Sum_probs=26.6
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
-.||.|+|+|..|.+||..++.+ |. +++++|.+
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~-----G~-------~V~l~d~~ 38 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSC
T ss_pred CceEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 36899999999999999998654 65 48888864
No 247
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=55.98 E-value=10 Score=38.11 Aligned_cols=33 Identities=21% Similarity=0.292 Sum_probs=26.5
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+.++||+|||.||+..|..+... |. ++.++|+.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~-----g~-------~V~lie~~ 37 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQL-----GI-------PTVLVEGQ 37 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEccC
Confidence 35799999999999999777543 53 69999984
No 248
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=55.93 E-value=10 Score=39.97 Aligned_cols=53 Identities=17% Similarity=0.347 Sum_probs=38.9
Q ss_pred chHHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 360 QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 360 QGTaaV~LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.|+......|+ .+.++..+.+.+++|+|.|..|.++|+.+... |. +++.+|++
T Consensus 257 ~~~~~~l~~gw---~~~~g~~L~GktVgIIG~G~IG~~vA~~l~~~-----G~-------~V~v~d~~ 309 (494)
T 3d64_A 257 YGCRESLVDGI---KRATDVMIAGKIAVVAGYGDVGKGCAQSLRGL-----GA-------TVWVTEID 309 (494)
T ss_dssp HHHHTTHHHHH---HHHHCCCCTTCEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEECSC
T ss_pred Hhhhhhhhhhh---hhccccccCCCEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 34444445552 35688999999999999999999999988532 53 47777764
No 249
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=55.82 E-value=11 Score=37.28 Aligned_cols=36 Identities=25% Similarity=0.496 Sum_probs=28.2
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 381 L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
++..||.|+|||..|.++|..++.. |+ + .+.++|.+
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~-----~~----~--~v~L~Di~ 40 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLK-----EL----G--DVVLFDIA 40 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHT-----TC----C--EEEEECSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhC-----CC----C--eEEEEeCC
Confidence 5567999999999999999887643 65 2 58999974
No 250
>2x8r_A Glycosyl hydrolase; peptidoglycan cleavage, endo-N-acetylmuramidases, motif; 1.70A {Aspergillus fumigatus}
Probab=55.62 E-value=21 Score=32.69 Aligned_cols=49 Identities=16% Similarity=0.204 Sum_probs=36.7
Q ss_pred CeeeEEeecCCCccccccCcccccccccccchhhhHHHHHHHHHHHHHhcCCCeeeEE
Q 012532 276 ACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQF 333 (461)
Q Consensus 276 ~~LPV~LDvGTnNe~LL~DplYlGlr~~R~~geeY~~fvdEfv~av~~~fGp~~lIqf 333 (461)
..||++||+=.+.- |-+...++.++..+.+..|+..|++++|-+.+|--
T Consensus 90 ~~lp~~lD~E~~~~---------~~~~~~~~~~~~~~~~~~f~~~v~~~~G~~p~iYt 138 (210)
T 2x8r_A 90 RTLPGMLDIEYNPY---------GATCYGLSHSQMVAWIHDFVNEYHHATSRWPMIYT 138 (210)
T ss_dssp SBCCCEEECCCCTT---------SCGGGGCCHHHHHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred CccceEEeeeccCC---------cccccCCCHHHHHHHHHHHHHHHHHHHCCccEEEc
Confidence 48999999964321 11223456788899999999999999988888853
No 251
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=55.38 E-value=22 Score=34.19 Aligned_cols=36 Identities=22% Similarity=0.146 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHH
Q 012532 366 VLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELI 402 (461)
Q Consensus 366 ~LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li 402 (461)
.++..+.|++..+. -.+++++|.|||..|...+.+.
T Consensus 153 ~~~ta~~al~~~~~-~~g~~VlV~GaG~vG~~a~qla 188 (352)
T 1e3j_A 153 PLSVGVHACRRAGV-QLGTTVLVIGAGPIGLVSVLAA 188 (352)
T ss_dssp HHHHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHH
T ss_pred hHHHHHHHHHhcCC-CCCCEEEEECCCHHHHHHHHHH
Confidence 44445566655443 3568999999987776665544
No 252
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=55.34 E-value=18 Score=36.95 Aligned_cols=38 Identities=16% Similarity=0.187 Sum_probs=30.1
Q ss_pred CCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 378 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 378 g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+..|.+.++.|+|.|..|..+|+.+... |+ +++.+|+.
T Consensus 186 ~~~l~gktvGIIGlG~IG~~vA~~l~a~-----G~-------~V~~~d~~ 223 (393)
T 2nac_A 186 AYDLEAMHVGTVAAGRIGLAVLRRLAPF-----DV-------HLHYTDRH 223 (393)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHGGG-----TC-------EEEEECSS
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHhC-----CC-------EEEEEcCC
Confidence 5679999999999999999999987532 53 47777754
No 253
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=55.30 E-value=34 Score=32.52 Aligned_cols=42 Identities=14% Similarity=0.208 Sum_probs=24.5
Q ss_pred chHHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHH
Q 012532 360 QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELI 402 (461)
Q Consensus 360 QGTaaV~LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li 402 (461)
++...-.++..+.+.+.. ..-.+++++|.|||..|...+.++
T Consensus 139 ~aa~l~~~~~~~~~~~~~-~~~~g~~VlV~GaG~vG~~aiq~a 180 (346)
T 4a2c_A 139 DGAFIEPITVGLHAFHLA-QGCENKNVIIIGAGTIGLLAIQCA 180 (346)
T ss_dssp GGGGHHHHHHHHHHHHHT-TCCTTSEEEEECCSHHHHHHHHHH
T ss_pred HHHhchHHHHHHHHHHHh-ccCCCCEEEEECCCCcchHHHHHH
Confidence 443333334444444443 345678999999998776555333
No 254
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=55.20 E-value=5.7 Score=43.32 Aligned_cols=36 Identities=25% Similarity=0.483 Sum_probs=31.0
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
++.||+++|+|..|.-+|+.|+.+ |+ .+|.++|.+=
T Consensus 410 ~~~~vlvvG~GglG~~~~~~L~~~-----Gv------g~i~l~D~d~ 445 (805)
T 2nvu_B 410 DTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMDT 445 (805)
T ss_dssp HTCCEEEECCSSHHHHHHHHHHTT-----TC------CEEEEEECCB
T ss_pred hCCeEEEECCCHHHHHHHHHHHHc-----CC------CcEEEECCCe
Confidence 688999999999999999988764 76 5899999753
No 255
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=55.19 E-value=9.6 Score=36.99 Aligned_cols=35 Identities=14% Similarity=0.278 Sum_probs=26.0
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
..++||+|||.||+..|..+.+ .|.. -+|.++|.+
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~-----~g~~-----~~V~lie~~ 38 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRK-----LDGE-----TPLLMITAD 38 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHT-----TCSS-----SCEEEECSS
T ss_pred CCcEEEECChHHHHHHHHHHHh-----hCCC-----CCEEEEECC
Confidence 3679999999999999988743 3531 257777764
No 256
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=55.14 E-value=9.3 Score=39.09 Aligned_cols=39 Identities=28% Similarity=0.378 Sum_probs=29.2
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHH-------hCCCChhhhcCcEEEEcCCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISK-------QTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~-------~~Gls~eeAr~~i~lvDs~G 428 (461)
..+|||+|||.||.-.|-.|...+.. ..|+ +|.++++.-
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~-------~V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKL-------NITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSC-------EEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCC-------eEEEEeCCC
Confidence 46899999999999999998775410 0254 588888753
No 257
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=55.09 E-value=11 Score=39.60 Aligned_cols=35 Identities=26% Similarity=0.509 Sum_probs=28.1
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCc
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GL 429 (461)
...|+|+|||.+|+++|..+.. .|+ ++.++|+..+
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~-----rG~-------~V~LlE~~~~ 66 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAA-----SGI-------KTGLIEMQDF 66 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCCC
Confidence 4579999999999999988864 375 5889997643
No 258
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=54.56 E-value=13 Score=35.26 Aligned_cols=36 Identities=28% Similarity=0.523 Sum_probs=28.0
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.+.-|+|+|||+||+-.|..+.+. +.|+ ++.++|+.
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~---r~G~-------~V~viEk~ 99 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKN---RPDL-------KVCIIESS 99 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHH---CTTS-------CEEEECSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHHh---CCCC-------eEEEEECC
Confidence 466799999999999999888653 1364 58888875
No 259
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=54.55 E-value=8.8 Score=39.11 Aligned_cols=34 Identities=18% Similarity=0.514 Sum_probs=27.5
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
+.+|+|+|||.||+..|-.+.. .|+ ++.++|+.-
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liE~~~ 40 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAM-----RGH-------RVLLLEREA 40 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEccCC
Confidence 4689999999999999987753 365 588999875
No 260
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=54.31 E-value=11 Score=38.00 Aligned_cols=34 Identities=24% Similarity=0.304 Sum_probs=26.7
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
+.+|+|+|||.||+..|..+.. .|. ++.++|+..
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~-----~G~-------~V~liE~~~ 39 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAAD-----EGL-------KVAIVERYK 39 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCCC
Confidence 3579999999999999977654 264 599999843
No 261
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=54.24 E-value=8.7 Score=40.13 Aligned_cols=33 Identities=27% Similarity=0.433 Sum_probs=27.1
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+--|||+|||.+|+++|..++. .|+ ++.++++.
T Consensus 18 ~~DVvVIGgGi~Gl~~A~~La~-----~G~-------~V~LlEk~ 50 (561)
T 3da1_A 18 QLDLLVIGGGITGAGIALDAQV-----RGI-------QTGLVEMN 50 (561)
T ss_dssp CEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CCC-------cEEEEECC
Confidence 4679999999999999987754 376 58899886
No 262
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=54.23 E-value=12 Score=34.74 Aligned_cols=32 Identities=19% Similarity=0.346 Sum_probs=25.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.||.|+|+|..|..+|..+... |. +++++|++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG-----GN-------DVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhC-----CC-------cEEEEECC
Confidence 4899999999999999888643 52 57777764
No 263
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=54.22 E-value=24 Score=33.89 Aligned_cols=52 Identities=12% Similarity=0.114 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHhCCCCCC--ceEEEeCc-chHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 364 SVVLAGLISAMKFLGGSLAD--QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 364 aV~LAgllaAlrv~g~~L~d--~rivf~GA-GsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
.+.++..+.|+......-.+ ++++|.|| |..|..++.++.. .|. ++++.+|+
T Consensus 140 ~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~-----~Ga------~~Vi~~~~ 194 (357)
T 2zb4_A 140 GMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHF-----LGC------SRVVGICG 194 (357)
T ss_dssp SHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred ccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHH-----CCC------CeEEEEeC
Confidence 34445555666333333456 89999998 8888777766543 353 25777775
No 264
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=54.19 E-value=13 Score=37.85 Aligned_cols=38 Identities=21% Similarity=0.341 Sum_probs=29.0
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCc
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GL 429 (461)
...+|||+|||.||+..|..|... +. ..+|.++|+..-
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~-----~~-----g~~V~lie~~~~ 47 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRAR-----DP-----GARVLIVSEDPE 47 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHH-----ST-----TCEEEEEESSSS
T ss_pred CcCCEEEECChHHHHHHHHHHHhc-----CC-----CCeEEEEeCCCC
Confidence 346899999999999999988654 11 237999998743
No 265
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=54.16 E-value=11 Score=35.73 Aligned_cols=38 Identities=21% Similarity=0.173 Sum_probs=26.7
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 385 rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
.|+|+|||.+|+.+|-.|.+. |.+. --..++.++|+.-
T Consensus 2 dVvIIGgGi~Gls~A~~La~~-----G~~~-~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHER-----YHSV-LQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----HTTT-SSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHh-----cccc-CCCceEEEEECCC
Confidence 589999999999999887654 3100 0013689999873
No 266
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=54.04 E-value=11 Score=35.05 Aligned_cols=33 Identities=24% Similarity=0.368 Sum_probs=23.9
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.--++|+|||+||+-.|-.+. + .|+ ++.++|+.
T Consensus 6 ~yDVvIIGaGpAGlsAA~~la----r-~g~-------~v~lie~~ 38 (304)
T 4fk1_A 6 YIDCAVIGAGPAGLNASLVLG----R-ARK-------QIALFDNN 38 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHH----H-TTC-------CEEEEECS
T ss_pred CcCEEEECCCHHHHHHHHHHH----H-CCC-------CEEEEeCC
Confidence 345899999999998775443 2 354 58889874
No 267
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=54.04 E-value=14 Score=35.74 Aligned_cols=33 Identities=18% Similarity=0.424 Sum_probs=26.3
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 385 rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
||.|+|||..|.++|..++.. |. ...++++|.+
T Consensus 2 kI~VIGaG~~G~~la~~l~~~-----g~-----~~~V~l~D~~ 34 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK-----GF-----AREMVLIDVD 34 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCC
Confidence 799999999999999887653 54 1368888875
No 268
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=54.03 E-value=14 Score=35.16 Aligned_cols=36 Identities=14% Similarity=0.308 Sum_probs=28.1
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
..||.|+|+|..|.+||..+... |.+ ..+|+++|++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~-----g~~----~~~V~v~dr~ 38 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIAN-----GYD----PNRICVTNRS 38 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHT-----TCC----GGGEEEECSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHC-----CCC----CCeEEEEeCC
Confidence 46899999999999999988653 653 2468888863
No 269
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=54.03 E-value=25 Score=35.14 Aligned_cols=66 Identities=17% Similarity=0.271 Sum_probs=46.7
Q ss_pred CCceeccCc---chHHHHHHHHHHHHHHH--------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHH
Q 012532 351 THLVFNDDI---QGTASVVLAGLISAMKF--------------------LGGSLADQRFLFLGAGEAGTGIAELIALEIS 407 (461)
Q Consensus 351 ~~~~FNDDI---QGTaaV~LAgllaAlrv--------------------~g~~L~d~rivf~GAGsAgiGIA~li~~~m~ 407 (461)
.+.+.|--- +.+|=-+++-+|+..|- .+..|.+.++.|+|.|..|..+|+.+...
T Consensus 93 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~IG~~vA~~l~~~-- 170 (343)
T 2yq5_A 93 NLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHIGSAVAEIFSAM-- 170 (343)
T ss_dssp -CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT--
T ss_pred CEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEecCHHHHHHHHHHhhC--
Confidence 577777532 23455568888877651 13467899999999999999999988532
Q ss_pred HhCCCChhhhcCcEEEEcCCC
Q 012532 408 KQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 408 ~~~Gls~eeAr~~i~lvDs~G 428 (461)
|+ +++.+|+..
T Consensus 171 ---G~-------~V~~~d~~~ 181 (343)
T 2yq5_A 171 ---GA-------KVIAYDVAY 181 (343)
T ss_dssp ---TC-------EEEEECSSC
T ss_pred ---CC-------EEEEECCCh
Confidence 65 577788753
No 270
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=54.00 E-value=7.4 Score=39.01 Aligned_cols=38 Identities=16% Similarity=0.130 Sum_probs=27.1
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCcc
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GLi 430 (461)
..+|||+|||.||+..|..|...- .| .+|.++|+..-+
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~---~g-------~~Vtvie~~~~~ 40 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLD---PE-------AHVTMIDQASRI 40 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHC---TT-------SEEEEECCC---
T ss_pred CCcEEEECCCHHHHHHHHHHHhhC---cC-------CCEEEEECCCcc
Confidence 468999999999999999886541 13 368888887543
No 271
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=53.99 E-value=29 Score=33.57 Aligned_cols=35 Identities=20% Similarity=0.187 Sum_probs=24.1
Q ss_pred HHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHH
Q 012532 369 GLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIA 403 (461)
Q Consensus 369 gllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~ 403 (461)
..+.|++..+....+++++|.|||..|...+.+..
T Consensus 167 ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qlak 201 (357)
T 2cf5_A 167 TVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAK 201 (357)
T ss_dssp HHHHHHHHTSTTSTTCEEEEECCSHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHH
Confidence 33456665554436889999999987777765553
No 272
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=53.90 E-value=14 Score=37.10 Aligned_cols=35 Identities=23% Similarity=0.406 Sum_probs=27.6
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 381 L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
-...+|+|+|||.||+..|..|..+ |. ++.++++.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~-----G~-------~V~VlE~~ 76 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRA-----GH-------DVTILEAN 76 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHT-----SC-------EEEEECSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEecc
Confidence 3467999999999999999988653 54 57777765
No 273
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=53.84 E-value=9.4 Score=38.73 Aligned_cols=24 Identities=29% Similarity=0.488 Sum_probs=20.7
Q ss_pred CCceEEEeCcchHHHHHHHHHHHH
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALE 405 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~ 405 (461)
...+|+|+|||.||+..|..|..+
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~ 30 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQN 30 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHT
T ss_pred CCCcEEEECCCHHHHHHHHHHHhc
Confidence 456899999999999999998653
No 274
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=53.80 E-value=25 Score=34.19 Aligned_cols=67 Identities=19% Similarity=0.231 Sum_probs=46.3
Q ss_pred CCCceecc-Ccc--hHHHHHHHHHHHHHHHh-----------------CCCCCCceEEEeCcchHHHHHHHHHHHHHHHh
Q 012532 350 TTHLVFND-DIQ--GTASVVLAGLISAMKFL-----------------GGSLADQRFLFLGAGEAGTGIAELIALEISKQ 409 (461)
Q Consensus 350 ~~~~~FND-DIQ--GTaaV~LAgllaAlrv~-----------------g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~ 409 (461)
..+++.|- +.. .+|=-+++.+|+..|-. ...|.+.++.|+|.|..|-.+|+.+...
T Consensus 71 ~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~---- 146 (303)
T 1qp8_A 71 PHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDVEIPLIQGEKVAVLGLGEIGTRVGKILAAL---- 146 (303)
T ss_dssp TTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCSCCCCCTTCEEEEESCSTHHHHHHHHHHHT----
T ss_pred cCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCCEEEEEccCHHHHHHHHHHHHC----
Confidence 45666663 332 23334788888876532 2268899999999999999999988532
Q ss_pred CCCChhhhcCcEEEEcCCC
Q 012532 410 TNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 410 ~Gls~eeAr~~i~lvDs~G 428 (461)
|+ +++.+|++.
T Consensus 147 -G~-------~V~~~dr~~ 157 (303)
T 1qp8_A 147 -GA-------QVRGFSRTP 157 (303)
T ss_dssp -TC-------EEEEECSSC
T ss_pred -CC-------EEEEECCCc
Confidence 64 477788653
No 275
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=53.78 E-value=7.5 Score=36.62 Aligned_cols=33 Identities=18% Similarity=0.468 Sum_probs=27.0
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
...|+|+|||.+|+.+|-.|. . |. ++.++|+..
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~-----G~-------~V~vlE~~~ 41 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-A-----HG-------RVVVLEREA 41 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-T-----TS-------CEEEECSSS
T ss_pred cCCEEEECCcHHHHHHHHHHh-C-----CC-------CEEEEECCC
Confidence 468999999999999998885 1 54 588999874
No 276
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=53.73 E-value=12 Score=37.89 Aligned_cols=35 Identities=14% Similarity=0.360 Sum_probs=26.9
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCc
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GL 429 (461)
..+|+|+|||.||+..|..|.+. |. ++.+++++.-
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~-----G~-------~V~vlE~~~~ 38 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDS-----GL-------NVVVLEARDR 38 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCCC
Confidence 35799999999999999988653 53 4777776543
No 277
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=53.53 E-value=11 Score=37.90 Aligned_cols=35 Identities=26% Similarity=0.340 Sum_probs=27.7
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
.+..++|+|||.||+..|..+... |. ++.++|+.-
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~-----G~-------~V~liE~~~ 53 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAEL-----GA-------RAAVVESHK 53 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEecCC
Confidence 346899999999999999888543 54 588999653
No 278
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=53.27 E-value=12 Score=37.30 Aligned_cols=21 Identities=14% Similarity=0.317 Sum_probs=19.0
Q ss_pred ceEEEeCcchHHHHHHHHHHH
Q 012532 384 QRFLFLGAGEAGTGIAELIAL 404 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~ 404 (461)
.+|+|+|||.||+..|..|..
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~ 60 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTV 60 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHH
Confidence 589999999999999988865
No 279
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=53.21 E-value=6.4 Score=39.25 Aligned_cols=34 Identities=38% Similarity=0.494 Sum_probs=26.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCc
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GL 429 (461)
..|+|+|||.||+..|..+.. .|+ ++.++|++-.
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~-----~G~-------~V~vlE~~~~ 40 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSR-----RGL-------KILLVDSKPW 40 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSS-----SSC-------CEEEECSSCG
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCCC
Confidence 579999999999999987743 365 5888887654
No 280
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=53.15 E-value=12 Score=40.46 Aligned_cols=35 Identities=23% Similarity=0.441 Sum_probs=28.3
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
+..+|||+|||.||+..|..+... |. ++.++|+..
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~-----G~-------~Vtlie~~~ 422 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMES-----GY-------TVHLTDTAE 422 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeCCC
Confidence 346899999999999999988642 53 599999864
No 281
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=53.03 E-value=8 Score=37.78 Aligned_cols=35 Identities=17% Similarity=0.398 Sum_probs=27.0
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCcc
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GLi 430 (461)
..++||+|||.||+..|..+.. .| ++.++|+.-..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~-----~g--------~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQ-----TY--------EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTT-----TS--------EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhh-----cC--------CEEEEECCCCC
Confidence 4589999999999999988832 23 69999986543
No 282
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=52.86 E-value=12 Score=37.53 Aligned_cols=33 Identities=21% Similarity=0.263 Sum_probs=26.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
..|+|+|||.||+..|-.+.. .|+ ++.++|+..
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~-----~G~-------~V~llEk~~ 59 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAE-----EGA-------NVLLLDKGN 59 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 579999999999999987754 364 589999765
No 283
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=52.72 E-value=13 Score=34.06 Aligned_cols=31 Identities=13% Similarity=0.084 Sum_probs=24.3
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 385 rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
||.|+|+|..|..+|..+... |. +++++|++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~r~ 32 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ-----GH-------EVQGWLRV 32 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred eEEEECcCHHHHHHHHHHHhC-----CC-------CEEEEEcC
Confidence 799999999999999988643 42 46666654
No 284
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=52.67 E-value=8.9 Score=38.23 Aligned_cols=35 Identities=23% Similarity=0.219 Sum_probs=27.5
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCc
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GL 429 (461)
+..|+|+|||.||+..|..+.+ .|. ++.++|+..-
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~-----~G~-------~V~vlEk~~~ 38 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAK-----LGK-------SVTVFDNGKK 38 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHh-----CCC-------CEEEEeCCCC
Confidence 4579999999999999987754 364 5889998653
No 285
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=52.66 E-value=26 Score=35.03 Aligned_cols=27 Identities=26% Similarity=0.290 Sum_probs=24.1
Q ss_pred CCCCCCceEEEeCcchHHHHHHHHHHH
Q 012532 378 GGSLADQRFLFLGAGEAGTGIAELIAL 404 (461)
Q Consensus 378 g~~L~d~rivf~GAGsAgiGIA~li~~ 404 (461)
+..|.+.++.|+|.|..|..+|+.+..
T Consensus 155 ~~~l~g~tvGIIGlG~IG~~vA~~l~~ 181 (352)
T 3gg9_A 155 GRVLKGQTLGIFGYGKIGQLVAGYGRA 181 (352)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHH
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHh
Confidence 567899999999999999999998854
No 286
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=52.64 E-value=27 Score=33.18 Aligned_cols=39 Identities=15% Similarity=0.176 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEeCc-chHHHHHHHHHH
Q 012532 365 VVLAGLISAMKFLGGSLADQRFLFLGA-GEAGTGIAELIA 403 (461)
Q Consensus 365 V~LAgllaAlrv~g~~L~d~rivf~GA-GsAgiGIA~li~ 403 (461)
+.++..+.|+.....--.+++++|.|| |..|..++.++.
T Consensus 132 ~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~ 171 (336)
T 4b7c_A 132 MTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIAR 171 (336)
T ss_dssp HHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 445555666644445556789999999 888877776654
No 287
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=52.33 E-value=15 Score=37.35 Aligned_cols=32 Identities=19% Similarity=0.264 Sum_probs=26.2
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEc
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVD 425 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvD 425 (461)
+.+++|+|||.||+..|..+.+. .|. ++.++|
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~----~G~-------~V~liE 34 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASL----HKK-------RVAVID 34 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHH----HCC-------CEEEEE
T ss_pred cccEEEECCCHHHHHHHHHHHHH----cCC-------EEEEEe
Confidence 45799999999999999998651 154 699999
No 288
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=51.78 E-value=12 Score=38.96 Aligned_cols=22 Identities=23% Similarity=0.448 Sum_probs=19.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHH
Q 012532 384 QRFLFLGAGEAGTGIAELIALE 405 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~ 405 (461)
.||.|+|+|..|.|||..++.+
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~a 76 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLA 76 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHHC
Confidence 6899999999999999988653
No 289
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=51.74 E-value=24 Score=33.58 Aligned_cols=38 Identities=11% Similarity=0.050 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCc-chHHHHHHHHHH
Q 012532 366 VLAGLISAMKFLGGSLADQRFLFLGA-GEAGTGIAELIA 403 (461)
Q Consensus 366 ~LAgllaAlrv~g~~L~d~rivf~GA-GsAgiGIA~li~ 403 (461)
.++..+.|+.-....-.+++++|.|| |..|..++.++.
T Consensus 139 ~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~ 177 (345)
T 2j3h_A 139 PGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAK 177 (345)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHH
Confidence 44444555533334446789999997 888887776664
No 290
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=51.71 E-value=17 Score=35.30 Aligned_cols=34 Identities=24% Similarity=0.422 Sum_probs=26.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.||.|+|||..|.++|..+... |+ -..|+++|.+
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~-----~~-----~~ev~l~Di~ 40 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQ-----GI-----ADEIVLIDAN 40 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCC
Confidence 5899999999999999766432 54 1479999975
No 291
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=51.62 E-value=12 Score=38.66 Aligned_cols=34 Identities=24% Similarity=0.388 Sum_probs=26.9
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
+..|+|+|||.||+..|-.+.. .|+ ++.++|++-
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~-----~G~-------~V~vlEr~~ 59 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAH-----RQV-------GHLVVEQTD 59 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 4579999999999999988754 375 478888753
No 292
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=51.47 E-value=14 Score=33.48 Aligned_cols=37 Identities=14% Similarity=0.167 Sum_probs=24.9
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 379 ~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+|-...+|.|+|+|..|..+|+.+... |. +++++|++
T Consensus 24 ~~~~~~~I~iiG~G~~G~~la~~l~~~-----g~-------~V~~~~r~ 60 (215)
T 2vns_A 24 VPDEAPKVGILGSGDFARSLATRLVGS-----GF-------KVVVGSRN 60 (215)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESS
T ss_pred CCCCCCEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 333456899999999999999988542 53 46777753
No 293
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=51.42 E-value=32 Score=33.36 Aligned_cols=37 Identities=14% Similarity=0.074 Sum_probs=24.6
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 379 ~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
..-.+++++|+|||..|...+.+.... |. ++++.+|+
T Consensus 188 ~~~~g~~VlV~GaG~vG~~aiqlak~~-----Ga------~~Vi~~~~ 224 (373)
T 1p0f_A 188 KVTPGSTCAVFGLGGVGFSAIVGCKAA-----GA------SRIIGVGT 224 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-----CC------CeEEEECC
Confidence 334578999999998777766554322 53 35777764
No 294
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=51.35 E-value=32 Score=33.26 Aligned_cols=38 Identities=16% Similarity=0.117 Sum_probs=25.0
Q ss_pred CCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 378 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 378 g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
...-.+++++|.|||..|...+.+.... |. ++++.+|+
T Consensus 186 ~~~~~g~~VlV~GaG~vG~~avqla~~~-----Ga------~~Vi~~~~ 223 (373)
T 2fzw_A 186 AKLEPGSVCAVFGLGGVGLAVIMGCKVA-----GA------SRIIGVDI 223 (373)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc-----CC------CeEEEEcC
Confidence 3344578999999998777766555322 53 35777764
No 295
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=51.33 E-value=10 Score=37.68 Aligned_cols=37 Identities=14% Similarity=0.232 Sum_probs=28.3
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCc
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GL 429 (461)
..+|||+|||.||+..|..+...- .| .+|.++|+..-
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~---~~-------~~V~vie~~~~ 39 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLK---PE-------WDVKVFEATEW 39 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC---TT-------SEEEEECSSSC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhC---cC-------CCEEEEECCCc
Confidence 468999999999999999886541 12 36888888653
No 296
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=51.33 E-value=16 Score=37.15 Aligned_cols=35 Identities=17% Similarity=0.282 Sum_probs=27.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
..+++|+|||.||+..|..+... |- ..+|.++|+.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-----~~~V~vie~~ 40 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKH-----HS-----RAHVDIYEKQ 40 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CS-----SCEEEEECSS
T ss_pred CceEEEECcCHHHHHHHHHHHhc-----CC-----CCCEEEEeCC
Confidence 35899999999999999998654 41 1369999976
No 297
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=51.31 E-value=17 Score=36.22 Aligned_cols=23 Identities=30% Similarity=0.426 Sum_probs=20.1
Q ss_pred CceEEEeCcchHHHHHHHHHHHH
Q 012532 383 DQRFLFLGAGEAGTGIAELIALE 405 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~ 405 (461)
..+|+|+|||.+|+..|..+...
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~ 55 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGA 55 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhC
Confidence 46899999999999999988654
No 298
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=51.17 E-value=14 Score=35.81 Aligned_cols=23 Identities=30% Similarity=0.508 Sum_probs=20.0
Q ss_pred CCceEEEeCcchHHHHHHHHHHH
Q 012532 382 ADQRFLFLGAGEAGTGIAELIAL 404 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~ 404 (461)
+..+|+|+|||.||+..|..|..
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~ 27 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQ 27 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHh
Confidence 45689999999999999998864
No 299
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=51.10 E-value=9.3 Score=37.23 Aligned_cols=36 Identities=31% Similarity=0.447 Sum_probs=29.0
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 380 ~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+|++.++||+|+|..|..-|++|..+ |. ++.++|.+
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~-----Ga-------~VtViap~ 45 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPT-----GC-------KLTLVSPD 45 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGG-----TC-------EEEEEEEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhC-----CC-------EEEEEcCC
Confidence 57899999999999999999988654 52 57777753
No 300
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=51.09 E-value=18 Score=35.65 Aligned_cols=66 Identities=17% Similarity=0.151 Sum_probs=45.4
Q ss_pred CCceeccCc---chHHHHHHHHHHHHHHH--------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHH
Q 012532 351 THLVFNDDI---QGTASVVLAGLISAMKF--------------------LGGSLADQRFLFLGAGEAGTGIAELIALEIS 407 (461)
Q Consensus 351 ~~~~FNDDI---QGTaaV~LAgllaAlrv--------------------~g~~L~d~rivf~GAGsAgiGIA~li~~~m~ 407 (461)
.+.+.|--- +.+|=-+++-+|+..|- .|..|.+.++.|+|.|..|..+|+.+..
T Consensus 90 gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~--- 166 (330)
T 4e5n_A 90 GVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAMADRLQG--- 166 (330)
T ss_dssp TCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHHHHHTTT---
T ss_pred CcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCHHHHHHHHHHHH---
Confidence 455554321 23455677777876652 2456899999999999999999998742
Q ss_pred HhCCCChhhhcCcEEEEcCCC
Q 012532 408 KQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 408 ~~~Gls~eeAr~~i~lvDs~G 428 (461)
.|+ +++.+|+..
T Consensus 167 --~G~-------~V~~~d~~~ 178 (330)
T 4e5n_A 167 --WGA-------TLQYHEAKA 178 (330)
T ss_dssp --SCC-------EEEEECSSC
T ss_pred --CCC-------EEEEECCCC
Confidence 254 577788754
No 301
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=51.05 E-value=13 Score=36.65 Aligned_cols=22 Identities=32% Similarity=0.530 Sum_probs=19.3
Q ss_pred CceEEEeCcchHHHHHHHHHHH
Q 012532 383 DQRFLFLGAGEAGTGIAELIAL 404 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~ 404 (461)
+.+|+|+|||.+|+..|..+..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~ 24 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAE 24 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT
T ss_pred cCCEEEECcCHHHHHHHHHHHH
Confidence 4689999999999999998854
No 302
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=50.76 E-value=12 Score=32.32 Aligned_cols=25 Identities=28% Similarity=0.476 Sum_probs=21.4
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHH
Q 012532 380 SLADQRFLFLGAGEAGTGIAELIAL 404 (461)
Q Consensus 380 ~L~d~rivf~GAGsAgiGIA~li~~ 404 (461)
++.+.+|+|+|+|..|..+|+.+..
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~ 60 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRA 60 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHH
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHh
Confidence 3567799999999999999998854
No 303
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=50.74 E-value=29 Score=34.26 Aligned_cols=46 Identities=20% Similarity=0.368 Sum_probs=27.5
Q ss_pred HHHHHHHhC-CCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 370 LISAMKFLG-GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 370 llaAlrv~g-~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
.+.|+.... ..-.+++++|+|||..|...+.+.. + .|. ++++.+|+
T Consensus 200 a~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak-~----~Ga------~~Vi~~~~ 246 (404)
T 3ip1_A 200 AYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILK-H----AGA------SKVILSEP 246 (404)
T ss_dssp HHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHH-H----TTC------SEEEEECS
T ss_pred HHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHH-H----cCC------CEEEEECC
Confidence 344443333 3446789999999877766554442 2 364 36777764
No 304
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=50.70 E-value=15 Score=35.31 Aligned_cols=33 Identities=30% Similarity=0.506 Sum_probs=26.5
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+.||.|+|+|+.|..+|..+..+ |. +++++|+.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~-----G~-------~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHEN-----GE-------EVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-----CC-------eEEEEeCC
Confidence 57999999999999999998653 52 57777764
No 305
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=50.68 E-value=17 Score=33.42 Aligned_cols=37 Identities=19% Similarity=0.398 Sum_probs=27.5
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 380 ~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
++...||.|+|+|..|..+|..+... |. +.++++|++
T Consensus 7 ~~~~m~i~iiG~G~mG~~~a~~l~~~-----g~------~~v~~~~~~ 43 (266)
T 3d1l_A 7 SIEDTPIVLIGAGNLATNLAKALYRK-----GF------RIVQVYSRT 43 (266)
T ss_dssp CGGGCCEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSS
T ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHC-----CC------eEEEEEeCC
Confidence 45556899999999999999988653 53 136777753
No 306
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=50.53 E-value=11 Score=36.81 Aligned_cols=33 Identities=15% Similarity=0.409 Sum_probs=25.6
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+.+|+|+|||.||+..|..+... |. ++.+++++
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~-----g~-------~v~v~E~~ 37 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKA-----GL-------SVAVIEAR 37 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEECC
Confidence 46899999999999999888643 53 36667665
No 307
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=50.49 E-value=11 Score=39.02 Aligned_cols=40 Identities=15% Similarity=0.296 Sum_probs=30.3
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCcc
Q 012532 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (461)
Q Consensus 381 L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GLi 430 (461)
....+|||+|||.||+..|..|...- .| -+|.++|+..-+
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~---~g-------~~V~vie~~~~~ 73 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLS---EE-------DEIIMVERGEYI 73 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHC---SS-------SEEEEECSSSCS
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhC---cC-------CCEEEEECCCCc
Confidence 34579999999999999999886541 13 368899987653
No 308
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=50.43 E-value=35 Score=32.24 Aligned_cols=39 Identities=18% Similarity=0.122 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeC-cchHHHHHHHHHHH
Q 012532 366 VLAGLISAMKFLGGSLADQRFLFLG-AGEAGTGIAELIAL 404 (461)
Q Consensus 366 ~LAgllaAlrv~g~~L~d~rivf~G-AGsAgiGIA~li~~ 404 (461)
.++..+.|++....--.+++++|.| +|..|..++.++..
T Consensus 124 ~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~ 163 (327)
T 1qor_A 124 KGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKA 163 (327)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 3444455555333334578999999 58888888776653
No 309
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=50.20 E-value=38 Score=33.08 Aligned_cols=36 Identities=19% Similarity=0.282 Sum_probs=27.8
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
...+++|+|+|..|-.+++.+... .++ ++|+++|+.
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~ 155 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSAR----FAL------EAILVHDPY 155 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECTT
T ss_pred CCcEEEEECccHHHHHHHHHHHHh----CCC------cEEEEECCc
Confidence 457999999999998888877543 232 578888886
No 310
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=50.16 E-value=36 Score=32.94 Aligned_cols=38 Identities=16% Similarity=0.010 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHH
Q 012532 366 VLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIA 403 (461)
Q Consensus 366 ~LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~ 403 (461)
+++..+.|+......-.+++++|+|||..|...+.+..
T Consensus 174 ~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak 211 (371)
T 1f8f_A 174 GIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAK 211 (371)
T ss_dssp HHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHH
T ss_pred hHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHH
Confidence 33334445532233345789999999987776665543
No 311
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=50.13 E-value=16 Score=33.75 Aligned_cols=36 Identities=17% Similarity=0.435 Sum_probs=24.7
Q ss_pred CCCCceEEEeCcch---HHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 380 SLADQRFLFLGAGE---AGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 380 ~L~d~rivf~GAGs---AgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+|+++++||-||++ .|.+||+.++ + +|. +++++|++
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la----~-~Ga-------~Vvi~~r~ 41 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLD----Q-LGA-------KLVFTYRK 41 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHH----H-TTC-------EEEEEESS
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHH----H-CCC-------EEEEEECC
Confidence 68999999999853 4444555554 3 374 58888864
No 312
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=49.88 E-value=30 Score=33.82 Aligned_cols=49 Identities=16% Similarity=0.091 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 366 VLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 366 ~LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
.++..+.|++. ...-.+++|+|+|||..|...+.+.. + .|. ++|+.+|+
T Consensus 170 ~~~ta~~al~~-~~~~~g~~VlV~GaG~vG~~aiqlAk-~----~Ga------~~Vi~~~~ 218 (398)
T 1kol_A 170 ILPTGYHGAVT-AGVGPGSTVYVAGAGPVGLAAAASAR-L----LGA------AVVIVGDL 218 (398)
T ss_dssp HHHHHHHHHHH-TTCCTTCEEEEECCSHHHHHHHHHHH-H----TTC------SEEEEEES
T ss_pred HHHHHHHHHHH-cCCCCCCEEEEECCcHHHHHHHHHHH-H----CCC------CeEEEEcC
Confidence 34445666664 33346789999999987776665443 2 253 35666664
No 313
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=49.87 E-value=25 Score=35.01 Aligned_cols=85 Identities=16% Similarity=0.173 Sum_probs=54.6
Q ss_pred eeEEeeCCCccHHHHHHHHcCCCceeccCc---chHHHHHHHHHHHHHHHh------------------------C-CCC
Q 012532 330 LIQFEDFANHNAFDLLEKYGTTHLVFNDDI---QGTASVVLAGLISAMKFL------------------------G-GSL 381 (461)
Q Consensus 330 lIqfEDF~~~nAf~lL~rYr~~~~~FNDDI---QGTaaV~LAgllaAlrv~------------------------g-~~L 381 (461)
+|+.--.+..|- ++-.--+..+.+.|--- ..+|=-+++.+|+..|-. + ..|
T Consensus 88 ~I~~~~~G~d~i-d~~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l 166 (347)
T 1mx3_A 88 IIVRIGSGFDNI-DIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARI 166 (347)
T ss_dssp EEEESSSCCTTB-CHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCC
T ss_pred EEEEcccccCcc-cHHHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCcccccccccccccCccCC
Confidence 366655555442 22111234566766432 345555788888887621 1 468
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.+.++.|+|.|..|..+|+.+.. .|+ +++.+|++
T Consensus 167 ~g~tvGIIG~G~IG~~vA~~l~~-----~G~-------~V~~~d~~ 200 (347)
T 1mx3_A 167 RGETLGIIGLGRVGQAVALRAKA-----FGF-------NVLFYDPY 200 (347)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEECTT
T ss_pred CCCEEEEEeECHHHHHHHHHHHH-----CCC-------EEEEECCC
Confidence 99999999999999999998853 254 47777753
No 314
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=49.70 E-value=17 Score=35.04 Aligned_cols=49 Identities=12% Similarity=0.135 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 366 VLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 366 ~LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
.++..+.|++..+ .-.+++++|+|||..|...+.+.. ..|. ++|+.+|+
T Consensus 151 ~~~ta~~al~~~~-~~~g~~VlV~GaG~vG~~a~qla~-----~~Ga------~~Vi~~~~ 199 (352)
T 3fpc_A 151 MMTTGFHGAELAN-IKLGDTVCVIGIGPVGLMSVAGAN-----HLGA------GRIFAVGS 199 (352)
T ss_dssp HHHHHHHHHHHTT-CCTTCCEEEECCSHHHHHHHHHHH-----TTTC------SSEEEECC
T ss_pred hhHHHHHHHHhcC-CCCCCEEEEECCCHHHHHHHHHHH-----HcCC------cEEEEECC
Confidence 3444556665543 335789999999877766554432 2364 36777776
No 315
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=49.50 E-value=13 Score=37.17 Aligned_cols=33 Identities=21% Similarity=0.365 Sum_probs=26.4
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+..++|+|||.||+..|..+.. .|. ++.++|+.
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~-----~G~-------~V~liEk~ 37 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAA-----LGK-------KVAIAEEF 37 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHh-----CCC-------EEEEEeCC
Confidence 3579999999999999988753 364 68999984
No 316
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=49.39 E-value=17 Score=35.81 Aligned_cols=36 Identities=25% Similarity=0.504 Sum_probs=28.2
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 381 L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
++..||.|+|||..|.++|..++.. |+ + .+.++|.+
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~-----~~----~--~v~l~Di~ 38 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIK-----QL----G--DVVLFDIA 38 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT-----TC----C--EEEEECSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-----CC----c--eEEEEeCC
Confidence 3457999999999999999887542 55 2 59999975
No 317
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=49.27 E-value=18 Score=35.25 Aligned_cols=32 Identities=22% Similarity=0.464 Sum_probs=25.6
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 385 rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
||.|+|||..|.++|-.++.. |+ ..++|+|.+
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~-----~l------~el~L~Di~ 32 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR-----GY------DDLLLIART 32 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-----TC------SCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHhC-----CC------CEEEEEcCC
Confidence 689999999999999776533 54 269999975
No 318
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=49.23 E-value=12 Score=36.88 Aligned_cols=22 Identities=18% Similarity=0.338 Sum_probs=18.6
Q ss_pred CceEEEeCcchHHHHHHHHHHH
Q 012532 383 DQRFLFLGAGEAGTGIAELIAL 404 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~ 404 (461)
+.+|+|+|||.+|+..|..|..
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~ 37 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRS 37 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHT
T ss_pred CCcEEEECCCHHHHHHHHHHHH
Confidence 3579999999999999988854
No 319
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=49.05 E-value=15 Score=32.88 Aligned_cols=31 Identities=6% Similarity=0.245 Sum_probs=24.4
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 385 rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+|+|+|+|..|..+|+.+... |. .+.++|++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~-----g~-------~v~vid~~ 32 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR-----KY-------GVVIINKD 32 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT-----TC-------CEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 699999999999999988643 53 47777754
No 320
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=48.90 E-value=13 Score=36.88 Aligned_cols=22 Identities=23% Similarity=0.300 Sum_probs=18.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHH
Q 012532 384 QRFLFLGAGEAGTGIAELIALE 405 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~ 405 (461)
.+|||+|||-+|+..|-.|.++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~ 23 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAA 23 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT
T ss_pred CCEEEECCcHHHHHHHHHHHHC
Confidence 4799999999999999887653
No 321
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=48.83 E-value=30 Score=32.82 Aligned_cols=40 Identities=13% Similarity=0.126 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEeCc-chHHHHHHHHHH
Q 012532 364 SVVLAGLISAMKFLGGSLADQRFLFLGA-GEAGTGIAELIA 403 (461)
Q Consensus 364 aV~LAgllaAlrv~g~~L~d~rivf~GA-GsAgiGIA~li~ 403 (461)
.+.++..+.|+......-.+++++|.|| |..|..++.++.
T Consensus 127 ~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~ 167 (333)
T 1v3u_A 127 GMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAK 167 (333)
T ss_dssp SHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHH
Confidence 3444455556643344456789999998 888877777664
No 322
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=48.44 E-value=23 Score=34.50 Aligned_cols=36 Identities=14% Similarity=0.380 Sum_probs=27.9
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+..||.|+|||..|..+|-.|+.. |+ -..++++|.+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~-----~~-----~~ei~L~Di~ 40 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQ-----SI-----VDELVIIDLD 40 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-----CS-----CSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCC
Confidence 456999999999999988876532 54 1479999975
No 323
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=48.13 E-value=16 Score=35.21 Aligned_cols=32 Identities=25% Similarity=0.335 Sum_probs=25.4
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
..||.|+|||+.|..+|..+..+ |. .++++|+
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~-----g~-------~V~~~~r 34 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALA-----GE-------AINVLAR 34 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHT-----TC-------CEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-----CC-------EEEEEEC
Confidence 46899999999999999988653 53 4677775
No 324
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=48.09 E-value=13 Score=39.71 Aligned_cols=34 Identities=12% Similarity=0.062 Sum_probs=27.5
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
+..|+|+|||.||+.+|-.+.+ .|. ++.++|+..
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~-----~G~-------~V~vlEk~~ 297 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQR-----RGA-------VVTLYCADA 297 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESSS
T ss_pred CCCEEEECCcHHHHHHHHHHHH-----CCC-------cEEEEeCCC
Confidence 4689999999999999987753 364 599999864
No 325
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=48.03 E-value=14 Score=39.28 Aligned_cols=34 Identities=26% Similarity=0.367 Sum_probs=27.5
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
..+|||+|||.||+..|..+.. .|. ++.++|+..
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~-----~g~-------~V~lie~~~ 406 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAA-----RGH-------QVTLFDAHS 406 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCCC
Confidence 4689999999999999988853 253 699999864
No 326
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=47.38 E-value=34 Score=33.18 Aligned_cols=37 Identities=14% Similarity=0.084 Sum_probs=24.4
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 379 ~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
..-..++++|+|||..|...+.+.. + .|. ++++.+|+
T Consensus 192 ~~~~g~~VlV~GaG~vG~~aiqlak-~----~Ga------~~Vi~~~~ 228 (376)
T 1e3i_A 192 KVTPGSTCAVFGLGCVGLSAIIGCK-I----AGA------SRIIAIDI 228 (376)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHH-H----TTC------SEEEEECS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHH-H----cCC------CeEEEEcC
Confidence 3345789999999977776665443 2 353 35777764
No 327
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=47.38 E-value=14 Score=39.05 Aligned_cols=33 Identities=12% Similarity=0.126 Sum_probs=27.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
..|+|+|||.||+.+|-.+.+ .|. ++.++|+..
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~-----~G~-------~V~vlEk~~ 305 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLR-----RGW-------QVTLYCADE 305 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 689999999999999988754 364 699999854
No 328
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=47.38 E-value=24 Score=33.90 Aligned_cols=48 Identities=25% Similarity=0.224 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCc-chHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 367 LAGLISAMKFLGGSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 367 LAgllaAlrv~g~~L~d~rivf~GA-GsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
++..+.|+.....--.+++++|.|| |..|..++.++.. .|. +++.+|+
T Consensus 144 ~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~-----~Ga-------~Vi~~~~ 192 (342)
T 4eye_A 144 YHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKG-----MGA-------KVIAVVN 192 (342)
T ss_dssp HHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHH-----cCC-------EEEEEeC
Confidence 3444455543444456889999998 8888877766542 363 4777665
No 329
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=47.20 E-value=16 Score=38.00 Aligned_cols=33 Identities=21% Similarity=0.288 Sum_probs=26.6
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
...+++|+|||.||+..|..+... |. ++.++|+
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~-----g~-------~v~liE~ 138 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKY-----GA-------KTAVLDY 138 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECC
T ss_pred ccccEEEECCCccHHHHHHHHHhC-----CC-------eEEEEec
Confidence 356899999999999999887543 54 5888985
No 330
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=47.14 E-value=23 Score=37.35 Aligned_cols=38 Identities=21% Similarity=0.425 Sum_probs=28.7
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
-+.||||+|||..|-+||.+|++. .++. ..+|.+.|+.
T Consensus 12 ~~~rVlIIGaGgVG~~va~lla~~----~dv~----~~~I~vaD~~ 49 (480)
T 2ph5_A 12 FKNRFVILGFGCVGQALMPLIFEK----FDIK----PSQVTIIAAE 49 (480)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHH----BCCC----GGGEEEEESS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC----CCCc----eeEEEEeccc
Confidence 357899999999999999999765 2332 1367788763
No 331
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=47.11 E-value=12 Score=38.19 Aligned_cols=37 Identities=14% Similarity=0.238 Sum_probs=28.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCcc
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GLi 430 (461)
.+|||+|||.||+..|..+... |- .-+|.++|+..-+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~-----~~-----~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRL-----SE-----TAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CS-----SSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhh-----Cc-----CCCEEEEECCCCc
Confidence 4799999999999999988653 21 1368899987543
No 332
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=47.10 E-value=22 Score=32.37 Aligned_cols=32 Identities=19% Similarity=0.408 Sum_probs=24.9
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 385 rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
||.|+|+|..|..+|..+... |. .+++++|++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~-----g~------~~v~~~~r~ 33 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQ-----GG------YRIYIANRG 33 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----CS------CEEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHC-----CC------CeEEEECCC
Confidence 799999999999999988654 42 357777764
No 333
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=46.95 E-value=44 Score=32.29 Aligned_cols=35 Identities=14% Similarity=0.102 Sum_probs=23.3
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHH
Q 012532 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIA 403 (461)
Q Consensus 368 AgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~ 403 (461)
+..+.|++.. .--.+++++|.|||..|...+.+..
T Consensus 166 ~ta~~~l~~~-~~~~g~~VlV~GaG~vG~~~~qlak 200 (360)
T 1piw_A 166 LTVYSPLVRN-GCGPGKKVGIVGLGGIGSMGTLISK 200 (360)
T ss_dssp HHHHHHHHHT-TCSTTCEEEEECCSHHHHHHHHHHH
T ss_pred HHHHHHHHHc-CCCCCCEEEEECCCHHHHHHHHHHH
Confidence 3445566553 2335789999999988877766553
No 334
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=46.79 E-value=29 Score=35.00 Aligned_cols=55 Identities=15% Similarity=0.175 Sum_probs=39.9
Q ss_pred hHHHHHHHHHHHHHHH---------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcC
Q 012532 361 GTASVVLAGLISAMKF---------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRK 419 (461)
Q Consensus 361 GTaaV~LAgllaAlrv---------------------~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~ 419 (461)
.+|=-++|-+|+..|- .+..|.+.++.|+|.|..|-.+|+.+.. .|+
T Consensus 133 ~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~~-----fG~------- 200 (365)
T 4hy3_A 133 PVAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEIGIVGFGDLGKALRRVLSG-----FRA------- 200 (365)
T ss_dssp HHHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEEEEECCSHHHHHHHHHHTT-----SCC-------
T ss_pred HHHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEEEEecCCcccHHHHHhhhh-----CCC-------
Confidence 3455567777777662 2346889999999999999999998742 254
Q ss_pred cEEEEcCC
Q 012532 420 KIWLVDSK 427 (461)
Q Consensus 420 ~i~lvDs~ 427 (461)
+++.+|+.
T Consensus 201 ~V~~~d~~ 208 (365)
T 4hy3_A 201 RIRVFDPW 208 (365)
T ss_dssp EEEEECSS
T ss_pred EEEEECCC
Confidence 47777754
No 335
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=46.76 E-value=24 Score=36.52 Aligned_cols=40 Identities=20% Similarity=0.293 Sum_probs=30.6
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCcc
Q 012532 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (461)
Q Consensus 379 ~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GLi 430 (461)
.+..+..|||+|||.||+..|-.+.+ .|. ++.++++...+
T Consensus 122 ~~~~~~DVvVVGaG~aGl~aA~~la~-----~G~-------~V~vlEk~~~~ 161 (571)
T 1y0p_A 122 APHDTVDVVVVGSGGAGFSAAISATD-----SGA-------KVILIEKEPVI 161 (571)
T ss_dssp CCSEECSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSSS
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHH-----CCC-------cEEEEeCCCCC
Confidence 44556789999999999999987754 364 58889887654
No 336
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=46.68 E-value=20 Score=32.75 Aligned_cols=36 Identities=22% Similarity=0.255 Sum_probs=25.9
Q ss_pred CCCCceEEEeCc-ch-HHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 380 SLADQRFLFLGA-GE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 380 ~L~d~rivf~GA-Gs-AgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.++++++||.|| |+ .|..+|+.++. .|. +++++|++
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~-----~G~-------~V~~~~r~ 56 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALL-----EGA-------DVVISDYH 56 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHH-----TTC-------EEEEEESC
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHH-----CCC-------EEEEecCC
Confidence 478899999999 64 77777777654 263 47777763
No 337
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=46.59 E-value=36 Score=33.03 Aligned_cols=37 Identities=16% Similarity=0.124 Sum_probs=24.3
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 379 ~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
..-.+++++|.|||..|...+.+... .|. ++|+.+|+
T Consensus 188 ~~~~g~~VlV~GaG~vG~~a~qla~~-----~Ga------~~Vi~~~~ 224 (374)
T 2jhf_A 188 KVTQGSTCAVFGLGGVGLSVIMGCKA-----AGA------ARIIGVDI 224 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 33457899999998777766655432 353 35777764
No 338
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=46.47 E-value=25 Score=36.04 Aligned_cols=32 Identities=31% Similarity=0.376 Sum_probs=25.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.+|.|+|+|..|.+||..++.+ |. +++++|.+
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~-----G~-------~V~l~D~~ 69 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARV-----GI-------SVVAVESD 69 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 5899999999999999988643 64 47788763
No 339
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=46.41 E-value=17 Score=37.89 Aligned_cols=33 Identities=33% Similarity=0.499 Sum_probs=26.9
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
-.||.|+|+|..|.|||..++.+ |. +++++|.+
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~a-----G~-------~V~l~D~~ 37 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASH-----GH-------QVLLYDIS 37 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSC
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEECC
Confidence 46899999999999999998753 65 48888863
No 340
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=46.21 E-value=15 Score=38.22 Aligned_cols=38 Identities=16% Similarity=0.403 Sum_probs=28.2
Q ss_pred CCCceEEEeCcchH--HHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 381 LADQRFLFLGAGEA--GTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 381 L~d~rivf~GAGsA--giGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
++..||.|+|||+. |.|+|..|+.. ..+ .. .|+|+|.+
T Consensus 3 m~~~KIaVIGaGs~g~g~~la~~l~~~----~~~----~g-eV~L~Di~ 42 (450)
T 3fef_A 3 LDQIKIAYIGGGSQGWARSLMSDLSID----ERM----SG-TVALYDLD 42 (450)
T ss_dssp CCCEEEEEETTTCSSHHHHHHHHHHHC----SSC----CE-EEEEECSS
T ss_pred CCCCEEEEECCChhHhHHHHHHHHHhc----ccc----CC-eEEEEeCC
Confidence 45679999999995 78999888642 122 22 79999975
No 341
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=46.17 E-value=19 Score=36.47 Aligned_cols=34 Identities=32% Similarity=0.544 Sum_probs=26.0
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.+.+++|+|||.||+..|..+... |. ++.++|+.
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~-----g~-------~v~v~E~~ 61 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASS-----GQ-------RVLIVDRR 61 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CCCCEEEECccHHHHHHHHHHHHC-----CC-------ceEEEecc
Confidence 356899999999999999887542 53 47777765
No 342
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=46.16 E-value=14 Score=37.52 Aligned_cols=32 Identities=22% Similarity=0.340 Sum_probs=25.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
..++|+|||+||+..|..+.. .|+ ++.++|++
T Consensus 9 ~DvvVIGgG~aGl~aA~~la~-----~G~-------~V~liE~~ 40 (492)
T 3ic9_A 9 VDVAIIGTGTAGMGAYRAAKK-----HTD-------KVVLIEGG 40 (492)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TCS-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------cEEEEeCC
Confidence 579999999999999887753 364 68899975
No 343
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=46.08 E-value=12 Score=39.66 Aligned_cols=33 Identities=18% Similarity=0.274 Sum_probs=26.5
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+.+|||+|||.||+..|-.|.. .|+ ++.++|+.
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~-----~G~-------kV~VlEr~ 139 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQ-----MGF-------NPIIVERG 139 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHH-----TTC-------CCEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------eEEEEEcc
Confidence 4689999999999999988764 365 47788875
No 344
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=46.07 E-value=17 Score=35.39 Aligned_cols=22 Identities=41% Similarity=0.626 Sum_probs=19.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHH
Q 012532 383 DQRFLFLGAGEAGTGIAELIALE 405 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~ 405 (461)
..+|.|+|+|..|-|||..++ +
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-a 33 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-S 33 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T
T ss_pred CCeEEEEeeCHHHHHHHHHHH-c
Confidence 468999999999999999987 5
No 345
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=45.99 E-value=13 Score=35.95 Aligned_cols=34 Identities=26% Similarity=0.382 Sum_probs=25.0
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 385 rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
+|+|+|||.||+..|-.+... ..|+ ++.++|+.-
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~---~~G~-------~V~v~E~~~ 35 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQA---RPLW-------AIDIVEKND 35 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHH---CTTS-------EEEEECSSC
T ss_pred eEEEECCCHHHHHHHHHHHhc---CCCC-------CEEEEECCC
Confidence 699999999999999888653 0143 477777653
No 346
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=45.85 E-value=20 Score=34.09 Aligned_cols=32 Identities=25% Similarity=0.468 Sum_probs=25.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.||.|+|+|..|..+|..+... |. +++++|++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~-----g~-------~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK-----GQ-------SVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEeCC
Confidence 5899999999999999887542 52 47777764
No 347
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=45.70 E-value=26 Score=34.59 Aligned_cols=43 Identities=16% Similarity=0.328 Sum_probs=35.9
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCceEEEeCcch-HHHHHHHHHH
Q 012532 361 GTASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIA 403 (461)
Q Consensus 361 GTaaV~LAgllaAlrv~g~~L~d~rivf~GAGs-AgiGIA~li~ 403 (461)
+-..+|-.|++-.++..+.+++..++|++|+|. .|.-+|.++.
T Consensus 136 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~ 179 (281)
T 2c2x_A 136 APLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLT 179 (281)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHT
T ss_pred CCCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHh
Confidence 334567778899999999999999999999996 5888888774
No 348
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=45.58 E-value=12 Score=37.89 Aligned_cols=38 Identities=8% Similarity=0.045 Sum_probs=28.2
Q ss_pred CceEEEeCcchHHHHHHHHHHH-HHHH-hCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIAL-EISK-QTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~-~m~~-~~Gls~eeAr~~i~lvDs~ 427 (461)
..+|+|+|||.||+..|..+.. .... ..| -+|.++|+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g-------~~V~lie~~ 42 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLD-------MAVDMLEML 42 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCC-------EEEEEEESS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCC-------CeEEEEecC
Confidence 4689999999999999999976 4210 002 368999986
No 349
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=45.57 E-value=16 Score=35.99 Aligned_cols=35 Identities=26% Similarity=0.412 Sum_probs=26.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
.+|+|+|||.||+..|..|.+. |.+ .+|.++++..
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~-----G~~-----~~V~vlEa~~ 37 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRA-----PCP-----PKVVLVESSE 37 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTS-----SSC-----CEEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhC-----CCC-----CcEEEEeCCC
Confidence 5799999999999999988642 531 1577777643
No 350
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=45.47 E-value=18 Score=34.26 Aligned_cols=22 Identities=27% Similarity=0.374 Sum_probs=19.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHH
Q 012532 384 QRFLFLGAGEAGTGIAELIALE 405 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~ 405 (461)
.||.|+|||+-|..+|..|..+
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~ 24 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQS 24 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHHHC
Confidence 4899999999999999988654
No 351
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=45.31 E-value=13 Score=36.07 Aligned_cols=22 Identities=23% Similarity=0.409 Sum_probs=20.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHH
Q 012532 384 QRFLFLGAGEAGTGIAELIALE 405 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~ 405 (461)
.+|+|+|||.+|+..|..|.++
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~ 27 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKE 27 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHHh
Confidence 5899999999999999999765
No 352
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=45.29 E-value=49 Score=30.95 Aligned_cols=37 Identities=19% Similarity=0.212 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCc-chHHHHHHHHHH
Q 012532 366 VLAGLISAMKFLGGSLADQRFLFLGA-GEAGTGIAELIA 403 (461)
Q Consensus 366 ~LAgllaAlrv~g~~L~d~rivf~GA-GsAgiGIA~li~ 403 (461)
.++..+.|++..+ --.+++++|.|| |..|..++.++.
T Consensus 110 ~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~ 147 (302)
T 1iz0_A 110 SFLTAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVAR 147 (302)
T ss_dssp HHHHHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHH
Confidence 4444555665444 345789999998 888877776553
No 353
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=45.27 E-value=38 Score=32.80 Aligned_cols=37 Identities=19% Similarity=0.163 Sum_probs=24.2
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 379 ~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
..-.+++++|.|||..|...+.+.. + .|. ++++.+|+
T Consensus 189 ~~~~g~~VlV~GaG~vG~~a~qla~-~----~Ga------~~Vi~~~~ 225 (374)
T 1cdo_A 189 KVEPGSTCAVFGLGAVGLAAVMGCH-S----AGA------KRIIAVDL 225 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHH-H----TTC------SEEEEECS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHH-H----cCC------CEEEEEcC
Confidence 3345789999999877766665443 2 353 35777764
No 354
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=45.26 E-value=13 Score=37.04 Aligned_cols=37 Identities=22% Similarity=0.305 Sum_probs=28.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCcc
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GLi 430 (461)
.+|||+|||.||+..|..+...- .| .+|.++|+.--+
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~---~g-------~~V~vie~~~~~ 39 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKY---PQ-------AEISLIDKQATV 39 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC---SS-------SEEEEECSSSCC
T ss_pred CCEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCCCC
Confidence 48999999999999999886541 13 368899876543
No 355
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=45.09 E-value=14 Score=37.35 Aligned_cols=37 Identities=11% Similarity=0.292 Sum_probs=27.9
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 380 ~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
.++.+||+|+|.|.+|++.|+.+.. .|. ++...|++-
T Consensus 2 ~~~~~~v~viG~G~~G~~~a~~l~~-----~G~-------~v~~~D~~~ 38 (439)
T 2x5o_A 2 DYQGKNVVIIGLGLTGLSCVDFFLA-----RGV-------TPRVMDTRM 38 (439)
T ss_dssp CCTTCCEEEECCHHHHHHHHHHHHT-----TTC-------CCEEEESSS
T ss_pred CCCCCEEEEEeecHHHHHHHHHHHh-----CCC-------EEEEEECCC
Confidence 3567899999999999999866632 364 467788754
No 356
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=45.09 E-value=21 Score=34.60 Aligned_cols=34 Identities=26% Similarity=0.364 Sum_probs=27.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.||.|+|+|..|..+|..+... |.. .+|+.+|++
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~-----G~~-----~~V~~~dr~ 67 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRS-----GFK-----GKIYGYDIN 67 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT-----TCC-----SEEEEECSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-----CCC-----CEEEEEECC
Confidence 7999999999999999988653 651 368888864
No 357
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=45.04 E-value=22 Score=33.51 Aligned_cols=30 Identities=17% Similarity=0.294 Sum_probs=24.8
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 385 rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
||.|+|+|..|..+|..+... |. +++++|+
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~-----g~-------~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN-----GN-------EVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH-----CC-------EEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhC-----CC-------eEEEEEc
Confidence 799999999999999988654 52 5888887
No 358
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=44.97 E-value=12 Score=40.71 Aligned_cols=33 Identities=21% Similarity=0.205 Sum_probs=26.4
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+-.|+|+|||.||+..|-.++. .|+ ++.+++..
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr-----~G~-------kVlLIEk~ 59 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAAR-----MGA-------KTAMFVLN 59 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEEec
Confidence 4689999999999999987754 264 58888875
No 359
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=44.95 E-value=47 Score=32.15 Aligned_cols=39 Identities=18% Similarity=0.189 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEeCc-chHHHHHHHHHH
Q 012532 365 VVLAGLISAMKFLGGSLADQRFLFLGA-GEAGTGIAELIA 403 (461)
Q Consensus 365 V~LAgllaAlrv~g~~L~d~rivf~GA-GsAgiGIA~li~ 403 (461)
+.++..+.|++....--.+++++|.|| |..|..++.++.
T Consensus 153 ~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~ 192 (351)
T 1yb5_A 153 IPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIAR 192 (351)
T ss_dssp HHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHH
Confidence 344555566653344446789999998 888887776654
No 360
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=44.90 E-value=24 Score=34.31 Aligned_cols=34 Identities=32% Similarity=0.331 Sum_probs=26.5
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 385 rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
||.|+|||..|.++|..|+.. |+- ..+.++|.+-
T Consensus 2 kI~ViGaG~vG~~la~~l~~~-----~~~-----~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN-----LDV-----DEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SCC-----SEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CCC-----CeEEEEECCh
Confidence 799999999999999887543 441 3688998753
No 361
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=44.88 E-value=17 Score=38.83 Aligned_cols=39 Identities=23% Similarity=0.449 Sum_probs=28.5
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
+..|||+|||.||+..|-.|.....+..|+ ++.++|++.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi-------~v~viE~~~ 46 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDL-------KVRIIDKRS 46 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTC-------CEEEECSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCC-------CEEEEeCCC
Confidence 357999999999999998886622111376 488888753
No 362
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=44.85 E-value=39 Score=32.40 Aligned_cols=32 Identities=19% Similarity=0.191 Sum_probs=21.5
Q ss_pred HHHHHHHhCCCCCCceEEEeCcchHHHHHHHHH
Q 012532 370 LISAMKFLGGSLADQRFLFLGAGEAGTGIAELI 402 (461)
Q Consensus 370 llaAlrv~g~~L~d~rivf~GAGsAgiGIA~li 402 (461)
.+.|++.. ..-.+++++|.|||..|...+.+.
T Consensus 165 a~~~l~~~-~~~~g~~VlV~GaG~vG~~a~qla 196 (348)
T 3two_A 165 TYSPLKFS-KVTKGTKVGVAGFGGLGSMAVKYA 196 (348)
T ss_dssp HHHHHHHT-TCCTTCEEEEESCSHHHHHHHHHH
T ss_pred HHHHHHhc-CCCCCCEEEEECCcHHHHHHHHHH
Confidence 35566654 334578999999987776655544
No 363
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=44.85 E-value=19 Score=36.82 Aligned_cols=35 Identities=20% Similarity=0.326 Sum_probs=28.9
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 380 ~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
+|+++++||+|+|..|..-|+++..+ | .++.++|.
T Consensus 9 ~l~~~~vlVvGgG~va~~k~~~L~~~-----g-------a~V~vi~~ 43 (457)
T 1pjq_A 9 QLRDRDCLIVGGGDVAERKARLLLEA-----G-------ARLTVNAL 43 (457)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHT-----T-------BEEEEEES
T ss_pred ECCCCEEEEECCCHHHHHHHHHHHhC-----c-------CEEEEEcC
Confidence 57889999999999999999998764 4 25777776
No 364
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=44.60 E-value=58 Score=30.66 Aligned_cols=38 Identities=13% Similarity=0.114 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHH
Q 012532 365 VVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIA 403 (461)
Q Consensus 365 V~LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~ 403 (461)
+.++..+.|+ .....-..++++|.|||..|...+.+..
T Consensus 126 ~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qlak 163 (315)
T 3goh_A 126 CPLLTAWQAF-EKIPLTKQREVLIVGFGAVNNLLTQMLN 163 (315)
T ss_dssp HHHHHHHHHH-TTSCCCSCCEEEEECCSHHHHHHHHHHH
T ss_pred cHHHHHHHHH-hhcCCCCCCEEEEECCCHHHHHHHHHHH
Confidence 3455555666 3333446789999999888887766553
No 365
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=44.55 E-value=19 Score=36.13 Aligned_cols=36 Identities=19% Similarity=0.378 Sum_probs=28.4
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCcc
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GLi 430 (461)
+.+++|+|||-+|+..|-.|..+ |. ++.++|++.-+
T Consensus 11 ~~dvvVIGaG~~GL~aA~~La~~-----G~-------~V~vlE~~~~~ 46 (453)
T 2bcg_G 11 DYDVIVLGTGITECILSGLLSVD-----GK-------KVLHIDKQDHY 46 (453)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEeCCCCC
Confidence 46899999999999999888643 64 68888887543
No 366
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=44.41 E-value=38 Score=32.70 Aligned_cols=36 Identities=17% Similarity=0.231 Sum_probs=23.0
Q ss_pred CCCceEEEeCcchHHHHH-HHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 381 LADQRFLFLGAGEAGTGI-AELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 381 L~d~rivf~GAGsAgiGI-A~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
++.++|+|+|||..|... +.+...+ .|. ++++.+|+
T Consensus 171 ~~~~~VlV~GaG~vG~~a~iqla~k~----~Ga------~~Vi~~~~ 207 (357)
T 2b5w_A 171 WDPSSAFVLGNGSLGLLTLAMLKVDD----KGY------ENLYCLGR 207 (357)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHCT----TCC------CEEEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHHH----cCC------cEEEEEeC
Confidence 344899999998777665 4433122 363 35888876
No 367
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=44.40 E-value=18 Score=37.02 Aligned_cols=33 Identities=24% Similarity=0.374 Sum_probs=26.7
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+..++|+|||+||+..|..+.+. |+ ++.++|++
T Consensus 32 ~~DVvVIGgGpaGl~aA~~la~~-----G~-------~V~liEk~ 64 (519)
T 3qfa_A 32 DYDLIIIGGGSGGLAAAKEAAQY-----GK-------KVMVLDFV 64 (519)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEecc
Confidence 46899999999999999887542 64 58999973
No 368
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=44.38 E-value=31 Score=36.05 Aligned_cols=66 Identities=24% Similarity=0.215 Sum_probs=45.9
Q ss_pred CCCceeccCc---chHHHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHH
Q 012532 350 TTHLVFNDDI---QGTASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISK 408 (461)
Q Consensus 350 ~~~~~FNDDI---QGTaaV~LAgllaAlrv------------------~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~ 408 (461)
..+.+.|--- ..+|=-++|-+|+..|- .|..|.+.++.|+|.|..|..+|+.+...
T Consensus 88 ~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~l~~~--- 164 (529)
T 1ygy_A 88 RGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAAF--- 164 (529)
T ss_dssp TTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCTTCEEEEECCSHHHHHHHHHHHTT---
T ss_pred CCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccCcCccccCCCEEEEEeeCHHHHHHHHHHHhC---
Confidence 3455555432 23455578888887653 25678999999999999999999988532
Q ss_pred hCCCChhhhcCcEEEEcCC
Q 012532 409 QTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 409 ~~Gls~eeAr~~i~lvDs~ 427 (461)
|+ +++.+|+.
T Consensus 165 --G~-------~V~~~d~~ 174 (529)
T 1ygy_A 165 --GA-------YVVAYDPY 174 (529)
T ss_dssp --TC-------EEEEECTT
T ss_pred --CC-------EEEEECCC
Confidence 53 47777753
No 369
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=44.36 E-value=21 Score=34.37 Aligned_cols=33 Identities=24% Similarity=0.426 Sum_probs=25.7
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 385 rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
||.|+|||..|.++|..++.. ++ -..++++|.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~-----~~-----g~~V~l~D~~ 34 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEK-----QL-----ARELVLLDVV 34 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCC
Confidence 799999999999999887542 21 1469999975
No 370
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=44.20 E-value=18 Score=38.02 Aligned_cols=34 Identities=12% Similarity=0.203 Sum_probs=26.1
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
+..|+|+|||.+|+..|-.|.. .|+ ++.++|+.-
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~-----~G~-------~V~VlEr~~ 82 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRA-----GGV-------GALVLEKLV 82 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEBSCS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEcCCC
Confidence 4579999999999999988854 376 488888753
No 371
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=44.19 E-value=16 Score=41.73 Aligned_cols=44 Identities=18% Similarity=0.317 Sum_probs=34.1
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 379 ~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
.+|++.||+++|||.-|.-+|+.|+.+ |+... ...+|.++|.+=
T Consensus 421 ~kL~~~~VlvVGaGGlGsevlk~La~~-----Gv~~g-~~G~i~lvD~D~ 464 (1015)
T 3cmm_A 421 KKIANSKVFLVGSGAIGCEMLKNWALL-----GLGSG-SDGYIVVTDNDS 464 (1015)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHH-----TTTCS-TTCEEEEECCCB
T ss_pred HHHhcCeEEEEecCHHHHHHHHHHHHc-----CcCcC-CCCeEEEEeCCE
Confidence 356789999999999999999999876 55211 125899999753
No 372
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=44.18 E-value=20 Score=34.28 Aligned_cols=32 Identities=22% Similarity=0.344 Sum_probs=25.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.||.|+|||+.|..+|..+..+ | ..++++|+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-----G-------HCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-----T-------CEEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCC
Confidence 4899999999999999888643 4 257777765
No 373
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=44.12 E-value=50 Score=32.42 Aligned_cols=37 Identities=19% Similarity=0.152 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHH
Q 012532 366 VLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIA 403 (461)
Q Consensus 366 ~LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~ 403 (461)
.++..+.|++.. .--.+++|+|+|||..|...+.+..
T Consensus 170 ~~~ta~~al~~~-~~~~g~~VlV~GaG~vG~~aiqlak 206 (398)
T 2dph_A 170 ILPTGFHGCVSA-GVKPGSHVYIAGAGPVGRCAAAGAR 206 (398)
T ss_dssp HHHHHHHHHHHT-TCCTTCEEEEECCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCCCCCEEEEECCCHHHHHHHHHHH
Confidence 344445566543 3345789999999987777666553
No 374
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=44.04 E-value=17 Score=41.04 Aligned_cols=34 Identities=24% Similarity=0.381 Sum_probs=27.7
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+.+|+|+|||.||+..|..+... |. +++.++|++
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~-----G~------~~Vtv~E~~ 220 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARL-----GY------SDITIFEKQ 220 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHT-----TC------CCEEEEESS
T ss_pred CCEEEEECccHHHHHHHHHHHhc-----CC------CcEEEEeCC
Confidence 56899999999999999988643 64 258899886
No 375
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=43.60 E-value=24 Score=31.32 Aligned_cols=26 Identities=19% Similarity=0.218 Sum_probs=18.9
Q ss_pred CCCCCceEEEeCc-chHHHHHHHHHHH
Q 012532 379 GSLADQRFLFLGA-GEAGTGIAELIAL 404 (461)
Q Consensus 379 ~~L~d~rivf~GA-GsAgiGIA~li~~ 404 (461)
.+|++.+|+|.|| |-.|..+++.+++
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~ 43 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKN 43 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHH
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHh
Confidence 4678899999998 8888888888764
No 376
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=43.12 E-value=21 Score=34.52 Aligned_cols=33 Identities=27% Similarity=0.433 Sum_probs=26.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.||.|+|||..|.++|-.++. .|+ + + ++++|.+
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~-----~g~----~-~-v~L~Di~ 35 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAA-----KEL----G-D-IVLLDIV 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC----S-E-EEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHH-----CCC----C-e-EEEEeCC
Confidence 489999999999999997743 254 1 2 9999964
No 377
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=43.04 E-value=28 Score=31.65 Aligned_cols=37 Identities=22% Similarity=0.460 Sum_probs=27.0
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
..||.|+|+|..|..+|..+... |.. ...+++++|++
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~-----g~~---~~~~v~~~~~~ 40 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANA-----NII---KKENLFYYGPS 40 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHH-----TSS---CGGGEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-----CCC---CCCeEEEEeCC
Confidence 35899999999999999988654 421 01357888864
No 378
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=42.92 E-value=16 Score=36.15 Aligned_cols=23 Identities=30% Similarity=0.417 Sum_probs=20.2
Q ss_pred CceEEEeCcchHHHHHHHHHHHH
Q 012532 383 DQRFLFLGAGEAGTGIAELIALE 405 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~ 405 (461)
+.+|+|+|||.||+..|..+.+.
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~ 29 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQ 29 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHh
Confidence 46899999999999999988654
No 379
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=42.83 E-value=58 Score=30.91 Aligned_cols=41 Identities=17% Similarity=0.153 Sum_probs=26.4
Q ss_pred HHHhCCCCCCceEEEeC-cchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 374 MKFLGGSLADQRFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 374 lrv~g~~L~d~rivf~G-AGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
++.....-.+++++|.| +|..|..++.++.. .|. +++.+|+
T Consensus 140 l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~-----~Ga-------~Vi~~~~ 181 (334)
T 3qwb_A 140 TNEAYHVKKGDYVLLFAAAGGVGLILNQLLKM-----KGA-------HTIAVAS 181 (334)
T ss_dssp HHTTSCCCTTCEEEESSTTBHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred HHHhccCCCCCEEEEECCCCHHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 33333445678999999 68888777665532 353 4776665
No 380
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=42.82 E-value=18 Score=34.50 Aligned_cols=32 Identities=19% Similarity=0.307 Sum_probs=24.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.||.|+|||+.|..+|..+..+ |. +++++|+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g~-------~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS-----GE-------DVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT-----SC-------CEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEEcC
Confidence 4899999999999999888653 42 46777654
No 381
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=42.53 E-value=14 Score=39.00 Aligned_cols=35 Identities=26% Similarity=0.448 Sum_probs=26.9
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
+..|||+|||.||+..|-.|... .|+ ++.++|+..
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~----~G~-------~V~viEr~~ 66 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAF----PDI-------RTCIVEQKE 66 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTC----TTS-------CEEEECSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHh----CCC-------CEEEEeCCC
Confidence 45799999999999999887541 265 488888754
No 382
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=42.51 E-value=34 Score=30.03 Aligned_cols=31 Identities=10% Similarity=0.243 Sum_probs=22.7
Q ss_pred HHHHHHHHhcCCCeeeEEeeCCCccHHHHHHHHcC
Q 012532 316 EFMTAVKQNYGERILIQFEDFANHNAFDLLEKYGT 350 (461)
Q Consensus 316 Efv~av~~~fGp~~lIqfEDF~~~nAf~lL~rYr~ 350 (461)
++.+.+.+.| ++|++ |...+.+..++++|+-
T Consensus 69 ~V~~~l~~~f---v~v~~-d~~~~~~~~l~~~y~v 99 (153)
T 2dlx_A 69 AVKNIIREHF---IFWQV-YHDSEEGQRYIQFYKL 99 (153)
T ss_dssp HHHHHHHHTE---EEEEE-ESSSHHHHHHHHHHTC
T ss_pred HHHHHHHcCe---EEEEE-ecCCHhHHHHHHHcCC
Confidence 4455556666 56777 7788888899999973
No 383
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=42.51 E-value=20 Score=36.00 Aligned_cols=33 Identities=24% Similarity=0.388 Sum_probs=26.3
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
.+..++|+|||.||+..|..+... |. ++.++|+
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~-----G~-------~V~liEk 40 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLN-----GA-------RVACLDF 40 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-----CC-------EEEEEEe
Confidence 356899999999999999877542 64 6889983
No 384
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=42.49 E-value=25 Score=36.35 Aligned_cols=37 Identities=24% Similarity=0.323 Sum_probs=29.0
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCcc
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GLi 430 (461)
.+..|||+|||.||+..|-.+.+. |+ ++.++++...+
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~-----G~-------~V~vlEk~~~~ 156 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKA-----GA-------NVILVDKAPFS 156 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEeCCCCC
Confidence 456899999999999999877543 64 58889887654
No 385
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=42.44 E-value=20 Score=35.58 Aligned_cols=33 Identities=30% Similarity=0.416 Sum_probs=26.1
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
..||.|+|+|+-|.++|..+... |. +++++|++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~-----G~-------~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK-----GQ-------KVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT-----TC-------CEEEECSC
T ss_pred CCeEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 46899999999999999988643 53 57777764
No 386
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=42.24 E-value=19 Score=35.79 Aligned_cols=22 Identities=27% Similarity=0.460 Sum_probs=19.2
Q ss_pred CceEEEeCcchHHHHHHHHHHH
Q 012532 383 DQRFLFLGAGEAGTGIAELIAL 404 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~ 404 (461)
..+|+|+|||.+|+..|..+..
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~ 34 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKI 34 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT
T ss_pred CCeEEEECCCHHHHHHHHHHHH
Confidence 4689999999999999988854
No 387
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=42.15 E-value=67 Score=30.36 Aligned_cols=20 Identities=25% Similarity=0.375 Sum_probs=15.6
Q ss_pred ceEEEeCc-chHHHHHHHHHH
Q 012532 384 QRFLFLGA-GEAGTGIAELIA 403 (461)
Q Consensus 384 ~rivf~GA-GsAgiGIA~li~ 403 (461)
.+++|.|| |..|...+.+..
T Consensus 152 ~~VlV~Ga~G~vG~~~~q~a~ 172 (330)
T 1tt7_A 152 GSVLVTGATGGVGGIAVSMLN 172 (330)
T ss_dssp CCEEEESTTSHHHHHHHHHHH
T ss_pred ceEEEECCCCHHHHHHHHHHH
Confidence 37999998 988887776654
No 388
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=42.09 E-value=27 Score=38.48 Aligned_cols=35 Identities=23% Similarity=0.413 Sum_probs=27.4
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCc
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GL 429 (461)
+.+|+|+|||.||+..|..+... |. ++.++++..-
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~-----g~-------~v~v~E~~~~ 370 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNF-----GI-------KVTVLEAKDR 370 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEecccc
Confidence 46899999999999999888654 53 5777776543
No 389
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=42.04 E-value=43 Score=32.03 Aligned_cols=33 Identities=18% Similarity=0.249 Sum_probs=22.4
Q ss_pred HHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHH
Q 012532 370 LISAMKFLGGSLADQRFLFLGAGEAGTGIAELIA 403 (461)
Q Consensus 370 llaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~ 403 (461)
.+.|++..+ .-.+++++|.|||..|..++.++.
T Consensus 153 a~~~l~~~~-~~~g~~VlV~GaG~vG~~~~~~a~ 185 (339)
T 1rjw_A 153 TYKALKVTG-AKPGEWVAIYGIGGLGHVAVQYAK 185 (339)
T ss_dssp HHHHHHHHT-CCTTCEEEEECCSTTHHHHHHHHH
T ss_pred HHHHHHhcC-CCCCCEEEEECCCHHHHHHHHHHH
Confidence 455665553 335689999999887776666553
No 390
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=41.92 E-value=18 Score=35.38 Aligned_cols=21 Identities=19% Similarity=0.343 Sum_probs=18.2
Q ss_pred ceEEEeCcchHHHHHHHHHHH
Q 012532 384 QRFLFLGAGEAGTGIAELIAL 404 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~ 404 (461)
.+++|+|||.||+..|..+..
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~ 22 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKK 22 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGG
T ss_pred CCEEEECcCHHHHHHHHHHHh
Confidence 478999999999999988754
No 391
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=41.74 E-value=28 Score=36.50 Aligned_cols=38 Identities=21% Similarity=0.391 Sum_probs=28.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhC--CCChhhhcCcEEEEcCCCc
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQT--NMPLEETRKKIWLVDSKGL 429 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~--Gls~eeAr~~i~lvDs~GL 429 (461)
-.|||+|||.||+..|-.+.+.... . |+ ++.++++..-
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~-~~~G~-------~V~vlEk~~~ 75 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQ-HEKDL-------RVCLVEKAAH 75 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHH-TTCCC-------CEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhcccc-cCCCC-------cEEEEeCCCC
Confidence 4799999999999999988765322 2 44 5788887643
No 392
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=41.38 E-value=20 Score=36.13 Aligned_cols=32 Identities=25% Similarity=0.330 Sum_probs=25.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
+-.++|+|||+||+..|..+.+ .|+ ++.++|+
T Consensus 6 ~~DvvVIG~G~aGl~aA~~la~-----~G~-------~V~liEk 37 (488)
T 3dgz_A 6 SFDLLVIGGGSGGLACAKEAAQ-----LGK-------KVAVADY 37 (488)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECC
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEEe
Confidence 3579999999999999987754 364 5899996
No 393
>1jfx_A 1,4-beta-N-acetylmuramidase M1; beta-alpha-barrel, cellosyl, lysozyme, hydrolase; 1.65A {Streptomyces coelicolor} SCOP: c.1.8.8
Probab=41.34 E-value=52 Score=30.12 Aligned_cols=50 Identities=16% Similarity=0.212 Sum_probs=36.5
Q ss_pred CCeeeEEeecCCCccccccCcccccccccccchhhhHHHHHHHHHHHHHhcCCCeeeEE
Q 012532 275 SACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQF 333 (461)
Q Consensus 275 ~~~LPV~LDvGTnNe~LL~DplYlGlr~~R~~geeY~~fvdEfv~av~~~fGp~~lIqf 333 (461)
...||++||+=.+.- +-+....+-++..+++..|+..|++++|-+++|-.
T Consensus 90 ~~~lp~~lD~E~~~~---------~~~~~~~~~~~~~~~~~~f~~~v~~~~G~~~~iYt 139 (217)
T 1jfx_A 90 NRTLPGVLDIEHNPS---------GAMCYGLSTTQMRTWINDFHARYKARTTRDVVIYT 139 (217)
T ss_dssp SSBCCCEEECCSCSS---------SCTTTTCCHHHHHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred CCCcCeEEEeecCCC---------CcccCCCCHHHHHHHHHHHHHHHHHHHCCCeEEEe
Confidence 457999999964321 11122356678899999999999999988888854
No 394
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=41.24 E-value=20 Score=35.00 Aligned_cols=40 Identities=10% Similarity=0.205 Sum_probs=27.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
.||.|+|+|..|.++|..+..+-.. +. ....+++++|+..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~----~~-~~~~~V~~~~r~~ 61 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKN----NY-LFENEVRMWIRDE 61 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHH----CT-TBCSCEEEECCSC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCc----cC-CCCCeEEEEECCh
Confidence 4799999999999999999765211 00 0003588888753
No 395
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=41.13 E-value=30 Score=33.02 Aligned_cols=35 Identities=17% Similarity=0.206 Sum_probs=27.4
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 380 ~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
+.+-.||.|+|+|..|.++|..+... |. +++++|+
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr 52 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKN-----GF-------KVTVWNR 52 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECS
T ss_pred cccCCEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeC
Confidence 34457899999999999999998653 53 5777776
No 396
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=41.02 E-value=25 Score=32.41 Aligned_cols=31 Identities=16% Similarity=0.183 Sum_probs=24.4
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 385 rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
||.|+|+|..|..+|..+... |. +++++|++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR-----GH-------YLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHC-----CC-------EEEEEECC
Confidence 799999999999999988542 53 47777764
No 397
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=40.92 E-value=23 Score=34.32 Aligned_cols=32 Identities=19% Similarity=0.316 Sum_probs=24.6
Q ss_pred ceEEEeCcchHHH-HHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGT-GIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgi-GIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+||.|+|.|-+|+ ++|+++.. .|. ++...|.+
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~-----~G~-------~V~~~D~~ 37 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKE-----AGF-------EVSGCDAK 37 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred cEEEEEEECHHHHHHHHHHHHh-----CCC-------EEEEEcCC
Confidence 5899999999999 58887754 364 47777764
No 398
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=40.77 E-value=23 Score=38.59 Aligned_cols=36 Identities=28% Similarity=0.482 Sum_probs=28.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCc
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GL 429 (461)
...|+|+|||.+|+.+|-.|.+. |. .++.++|+..+
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~~-----G~------~~V~vlE~~~~ 39 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVTR-----GW------NNITVLDQGPL 39 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-----TC------CCEEEECSSCT
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-----CC------CcEEEEeCCCC
Confidence 46899999999999999888643 63 26899998765
No 399
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=40.34 E-value=17 Score=36.07 Aligned_cols=34 Identities=12% Similarity=0.187 Sum_probs=27.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 385 rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
++||+|||.||+..|..+.+.. .| .++.++|+..
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~---~g-------~~V~lie~~~ 35 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADH---PD-------ADVTAYEMND 35 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCC
Confidence 6899999999999999986541 13 3688999865
No 400
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=40.13 E-value=30 Score=31.96 Aligned_cols=34 Identities=26% Similarity=0.364 Sum_probs=26.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.+|.|+|+|..|..+|..+... |.. .+++++|++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~-----g~~-----~~V~~~d~~ 35 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRS-----GFK-----GKIYGYDIN 35 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-----TCC-----SEEEEECSC
T ss_pred cEEEEEecCHHHHHHHHHHHhc-----CCC-----cEEEEEeCC
Confidence 3799999999999999988642 541 358888874
No 401
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=40.09 E-value=18 Score=35.97 Aligned_cols=35 Identities=14% Similarity=0.218 Sum_probs=27.4
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCc
Q 012532 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (461)
Q Consensus 385 rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GL 429 (461)
++||+|||.||+..|..+.... .| .++.++|+...
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~ 36 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLH---PD-------AEIQWYEKGDF 36 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHC---TT-------SEEEEEESSSS
T ss_pred eEEEECCCHHHHHHHHHHHHhC---cC-------CeEEEEECCCc
Confidence 6999999999999999886541 13 36889988653
No 402
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=40.07 E-value=35 Score=33.50 Aligned_cols=35 Identities=26% Similarity=0.486 Sum_probs=27.3
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
..||.|+|||..|..+|-+|+.. ++ -..++|+|.+
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~-----~~-----~~el~L~Di~ 43 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIF 43 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCC
Confidence 36999999999999988877433 44 2579999974
No 403
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=40.04 E-value=42 Score=32.50 Aligned_cols=44 Identities=18% Similarity=0.125 Sum_probs=27.0
Q ss_pred HHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 371 ISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 371 laAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
+.|+......-.+++++|.|+|..|...+.+.. + .|. +++.+|+
T Consensus 178 ~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~-~----~Ga-------~Vi~~~~ 221 (363)
T 3uog_A 178 WFALVEKGHLRAGDRVVVQGTGGVALFGLQIAK-A----TGA-------EVIVTSS 221 (363)
T ss_dssp HHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHH-H----TTC-------EEEEEES
T ss_pred HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHH-H----cCC-------EEEEEec
Confidence 344432333446789999999977776665543 2 363 4777765
No 404
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=39.99 E-value=28 Score=34.15 Aligned_cols=36 Identities=28% Similarity=0.430 Sum_probs=28.9
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 381 L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.+..||.|+|||..|.++|..++.. |+ ..+.++|.+
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~-----g~------~~v~l~D~~ 41 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQK-----EL------ADVVLVDIP 41 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEecc
Confidence 4567999999999999999988642 54 268899986
No 405
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=39.61 E-value=36 Score=32.56 Aligned_cols=32 Identities=13% Similarity=0.177 Sum_probs=21.8
Q ss_pred HHHHHHHh----CCCCCCceEEEeCcchHHHHHHHHH
Q 012532 370 LISAMKFL----GGSLADQRFLFLGAGEAGTGIAELI 402 (461)
Q Consensus 370 llaAlrv~----g~~L~d~rivf~GAGsAgiGIA~li 402 (461)
.+.|++.. +.. .+++++|.|||..|...+.+.
T Consensus 155 a~~al~~~~~~~~~~-~g~~VlV~GaG~vG~~aiqla 190 (344)
T 2h6e_A 155 SMGAIRQALPFISKF-AEPVVIVNGIGGLAVYTIQIL 190 (344)
T ss_dssp HHHHHHHHHHHHTTC-SSCEEEEECCSHHHHHHHHHH
T ss_pred HHHHHHhhhhcccCC-CCCEEEEECCCHHHHHHHHHH
Confidence 35555554 244 889999999987666665544
No 406
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=39.47 E-value=24 Score=31.04 Aligned_cols=31 Identities=29% Similarity=0.457 Sum_probs=24.2
Q ss_pred eEEEeC-cchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 385 RFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 385 rivf~G-AGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
||+|+| +|..|..+|..+.. .|. +++++|++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~-----~g~-------~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLAT-----LGH-------EIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TTC-------EEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 789999 99999999988753 252 57777764
No 407
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=39.36 E-value=47 Score=31.75 Aligned_cols=34 Identities=9% Similarity=0.022 Sum_probs=22.4
Q ss_pred HHHHHHHhCCCCCCceEEEeCc-chHHHHHHHHHH
Q 012532 370 LISAMKFLGGSLADQRFLFLGA-GEAGTGIAELIA 403 (461)
Q Consensus 370 llaAlrv~g~~L~d~rivf~GA-GsAgiGIA~li~ 403 (461)
.+.|++....--.+++++|.|| |..|..++.++.
T Consensus 154 a~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~ 188 (343)
T 2eih_A 154 AWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAK 188 (343)
T ss_dssp HHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHH
Confidence 3344433223335789999999 888887777664
No 408
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=39.25 E-value=62 Score=30.42 Aligned_cols=29 Identities=24% Similarity=0.311 Sum_probs=18.7
Q ss_pred HHhCCCCCCceEEEeCc-chHHHHHHHHHH
Q 012532 375 KFLGGSLADQRFLFLGA-GEAGTGIAELIA 403 (461)
Q Consensus 375 rv~g~~L~d~rivf~GA-GsAgiGIA~li~ 403 (461)
+..+.+..+.+++|.|| |..|...+.+..
T Consensus 139 ~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~ 168 (324)
T 3nx4_A 139 EDAGIRPQDGEVVVTGASGGVGSTAVALLH 168 (324)
T ss_dssp HHTTCCGGGCCEEESSTTSHHHHHHHHHHH
T ss_pred hhcccCCCCCeEEEECCCcHHHHHHHHHHH
Confidence 33344444434999998 888877666553
No 409
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=39.24 E-value=28 Score=34.63 Aligned_cols=35 Identities=17% Similarity=0.443 Sum_probs=25.3
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
..+|+|+|||.||+..|..+... |. .++.++++..
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~-----g~------~~v~~~e~~~ 38 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEA-----GI------TDLLILEATD 38 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHT-----TC------CCEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhc-----CC------CceEEEeCCC
Confidence 45799999999999999888643 53 1466666653
No 410
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=39.11 E-value=23 Score=39.69 Aligned_cols=34 Identities=26% Similarity=0.445 Sum_probs=27.3
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
..+|||+|||.||+..|..+... |. ++.++|+..
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~-----G~-------~V~lie~~~ 161 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRS-----GA-------RVMLLDERA 161 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-----CC-------cEEEEeCCC
Confidence 35799999999999999888642 54 689999853
No 411
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=39.09 E-value=32 Score=34.10 Aligned_cols=38 Identities=21% Similarity=0.402 Sum_probs=29.0
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 380 ~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+....||.|+|||..|.++|..++.. |+ -..+.|+|.+
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~ 53 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMK-----DL-----ADELALVDVI 53 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhC-----CC-----CceEEEEeCC
Confidence 34567999999999999999888542 54 2468999964
No 412
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=38.79 E-value=63 Score=30.50 Aligned_cols=19 Identities=26% Similarity=0.434 Sum_probs=14.7
Q ss_pred ceEEEeCc-chHHHHHHHHH
Q 012532 384 QRFLFLGA-GEAGTGIAELI 402 (461)
Q Consensus 384 ~rivf~GA-GsAgiGIA~li 402 (461)
.+++|.|| |..|...+.+.
T Consensus 151 ~~VlV~Ga~G~vG~~~~q~a 170 (328)
T 1xa0_A 151 GPVLVTGATGGVGSLAVSML 170 (328)
T ss_dssp CCEEESSTTSHHHHHHHHHH
T ss_pred ceEEEecCCCHHHHHHHHHH
Confidence 37999998 88887776655
No 413
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=38.52 E-value=23 Score=29.26 Aligned_cols=22 Identities=32% Similarity=0.634 Sum_probs=18.5
Q ss_pred CceEEEeCcchHHHHHHHHHHH
Q 012532 383 DQRFLFLGAGEAGTGIAELIAL 404 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~ 404 (461)
..+++|+|||..|.-+++.+..
T Consensus 4 ~~~vlIiGaG~~g~~l~~~l~~ 25 (141)
T 3nkl_A 4 KKKVLIYGAGSAGLQLANMLRQ 25 (141)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHh
Confidence 4689999999999888887643
No 414
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=38.46 E-value=26 Score=35.65 Aligned_cols=35 Identities=14% Similarity=0.154 Sum_probs=27.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCcc
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GLi 430 (461)
--|||+|+|.||+..|-.+.+ .|. ++.++++...+
T Consensus 42 ~DVvVVGaG~AGl~AA~~aa~-----~G~-------~V~vlEk~~~~ 76 (510)
T 4at0_A 42 ADVVVAGYGIAGVAASIEAAR-----AGA-------DVLVLERTSGW 76 (510)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------cEEEEeCCCCC
Confidence 469999999999999887754 364 58888876554
No 415
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=38.32 E-value=38 Score=33.51 Aligned_cols=35 Identities=26% Similarity=0.523 Sum_probs=28.0
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
+..||.|+|||..|..+|..|+.. |+- ..+.++|.
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~-----~~~-----~el~l~D~ 42 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQ-----GIA-----QEIGIVDI 42 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CCC-----CeEEEEeC
Confidence 346899999999999999888654 541 47999997
No 416
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=38.31 E-value=26 Score=32.81 Aligned_cols=32 Identities=19% Similarity=0.328 Sum_probs=25.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.||.|+|+|..|.++|..+... |. +++++|++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~-----G~-------~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA-----GY-------LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 5899999999999999988653 53 46777764
No 417
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=38.28 E-value=38 Score=33.04 Aligned_cols=34 Identities=24% Similarity=0.447 Sum_probs=26.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.||.|+|||..|..+|-+++.. ++ -..|+|+|.+
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~ 39 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ-----GI-----AEEFVIVDVV 39 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCC
Confidence 5899999999999988876543 44 2579999973
No 418
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=38.24 E-value=53 Score=31.47 Aligned_cols=44 Identities=18% Similarity=0.237 Sum_probs=28.5
Q ss_pred HHHHHHHhCCCCCCceEEEeCc-chHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 370 LISAMKFLGGSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 370 llaAlrv~g~~L~d~rivf~GA-GsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
.+.|++.. ..-.+++++|.|| |..|..++.++.. .|. +++.+|+
T Consensus 158 a~~~l~~~-~~~~g~~vlV~Ga~ggiG~~~~~~a~~-----~Ga-------~V~~~~~ 202 (347)
T 2hcy_A 158 VYKALKSA-NLMAGHWVAISGAAGGLGSLAVQYAKA-----MGY-------RVLGIDG 202 (347)
T ss_dssp HHHHHHTT-TCCTTCEEEEETTTSHHHHHHHHHHHH-----TTC-------EEEEEEC
T ss_pred HHHHHHhc-CCCCCCEEEEECCCchHHHHHHHHHHH-----CCC-------cEEEEcC
Confidence 35556544 2335789999999 7788777766542 252 5777764
No 419
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=38.20 E-value=29 Score=32.88 Aligned_cols=32 Identities=22% Similarity=0.335 Sum_probs=25.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.||.|+|+|..|.++|..+... |. +++++|++
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 39 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRA-----GL-------STWGADLN 39 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEECC
Confidence 5899999999999999988653 53 47777763
No 420
>2wag_A Lysozyme, putative; hydrolase, GH25, lysin; 1.40A {Bacillus anthracis}
Probab=38.15 E-value=33 Score=31.91 Aligned_cols=58 Identities=14% Similarity=0.264 Sum_probs=39.9
Q ss_pred hhHhhhcCCCCCCeeeEEeecCCCccccccCcccccccccccchhhhHHHHHHHHHHHHHhcCCCeeeE
Q 012532 264 SLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQ 332 (461)
Q Consensus 264 ~LYta~gGI~P~~~LPV~LDvGTnNe~LL~DplYlGlr~~R~~geeY~~fvdEfv~av~~~fGp~~lIq 332 (461)
.-|....+-.+ ..||++||+=.... -...+.+.++..+.+..|+..|++.+|-+++|-
T Consensus 87 ~~f~~~~~~~~-~~lp~~lDvE~~~~----------~~~~~~s~~~~~~~~~~f~~~v~~~~G~~p~iY 144 (220)
T 2wag_A 87 EQFIRNVPKYK-QALPPVIDVEFYAN----------KKDNPPKREDVTKELSVMIEMLEKHYGKKVILY 144 (220)
T ss_dssp HHHHHHSCCCT-TSCCCEEEECCCTT----------GGGSCCCHHHHHHHHHHHHHHHHHHHCSCCEEE
T ss_pred HHHHHhccccC-CCCceEEEEeccCC----------cccCCCCHHHHHHHHHHHHHHHHHHHCCceEEE
Confidence 33444444332 36999999964211 113446678888999999999999998888875
No 421
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=38.15 E-value=19 Score=36.37 Aligned_cols=36 Identities=28% Similarity=0.449 Sum_probs=27.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
.+|||+|||.||+..|..+.+.- ..|. ++.++|+..
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~--~~G~-------~V~liE~~~ 38 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSH--PETT-------QVTVIDCDG 38 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC--TTTE-------EEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--CCcC-------EEEEEeCCC
Confidence 47999999999999999886541 0042 689999874
No 422
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=37.96 E-value=36 Score=32.45 Aligned_cols=35 Identities=14% Similarity=0.244 Sum_probs=27.3
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 380 ~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
.+...||.|+|+|..|.++|..+... |. +++++|+
T Consensus 6 ~~~~~~IgiIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr 40 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGTIMAQVLLKQ-----GK-------RVAIWNR 40 (306)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECS
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeC
Confidence 34567999999999999999998653 54 4777775
No 423
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=37.71 E-value=28 Score=32.84 Aligned_cols=32 Identities=22% Similarity=0.355 Sum_probs=25.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.+|.|+|+|..|..+|..+... |. +++++|++
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~-----g~-------~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM-----GH-------TVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHhC-----CC-------EEEEEeCC
Confidence 6899999999999999988542 53 47777753
No 424
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=37.67 E-value=30 Score=33.24 Aligned_cols=33 Identities=18% Similarity=0.346 Sum_probs=26.3
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
...||.|+|+|..|.++|..+... |. +++++|+
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr 62 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEA-----GY-------ALQVWNR 62 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHT-----TC-------EEEEECS
T ss_pred CCCEEEEECccHHHHHHHHHHHhC-----CC-------eEEEEcC
Confidence 456999999999999999998653 53 4777775
No 425
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=36.97 E-value=21 Score=34.85 Aligned_cols=35 Identities=23% Similarity=0.354 Sum_probs=26.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
..|+|+|||.+|+.+|-.|.+.. -|+ ++.++|+..
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~---pG~-------~V~vlE~~~ 71 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLA---PGR-------SLLLVEEGG 71 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC---TTS-------CEEEECSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhcC---CCC-------eEEEEeCCC
Confidence 57999999999999999886530 143 588888753
No 426
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=36.94 E-value=59 Score=31.75 Aligned_cols=34 Identities=15% Similarity=0.134 Sum_probs=21.5
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHH
Q 012532 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELI 402 (461)
Q Consensus 368 AgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li 402 (461)
+..+.|++..+ --.+++++|.|||..|...+.+.
T Consensus 181 ~tA~~al~~~~-~~~g~~VlV~GaG~vG~~aiqla 214 (369)
T 1uuf_A 181 ITTYSPLRHWQ-AGPGKKVGVVGIGGLGHMGIKLA 214 (369)
T ss_dssp HHHHHHHHHTT-CCTTCEEEEECCSHHHHHHHHHH
T ss_pred HHHHHHHHhcC-CCCCCEEEEECCCHHHHHHHHHH
Confidence 33455666543 23578999999987666655443
No 427
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=36.29 E-value=39 Score=33.15 Aligned_cols=34 Identities=32% Similarity=0.591 Sum_probs=27.3
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 385 rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
||.|+|||..|.++|..++.. |+ -..+.++|.+-
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQ-----DV-----AKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----SSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCch
Confidence 789999999999999988654 54 14799999753
No 428
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=36.24 E-value=10 Score=38.64 Aligned_cols=33 Identities=24% Similarity=0.378 Sum_probs=26.0
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
..+|||+|||.||+..|..+... .++.++|+.-
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-------------~~V~vie~~~ 140 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-------------LTVALIEERG 140 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-------------CCEEEECTTS
T ss_pred cCCEEEECccHHHHHHHHHHHhc-------------CCEEEEeCCC
Confidence 35799999999999999877432 3688898764
No 429
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=36.03 E-value=20 Score=34.38 Aligned_cols=26 Identities=19% Similarity=0.347 Sum_probs=19.9
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHH
Q 012532 380 SLADQRFLFLGAGEAGTGIAELIALE 405 (461)
Q Consensus 380 ~L~d~rivf~GAGsAgiGIA~li~~~ 405 (461)
.....||.|+|||+.|..+|..+...
T Consensus 16 ~~~~~kI~IiGaGa~G~~~a~~L~~~ 41 (318)
T 3hwr_A 16 YFQGMKVAIMGAGAVGCYYGGMLARA 41 (318)
T ss_dssp ----CEEEEESCSHHHHHHHHHHHHT
T ss_pred hccCCcEEEECcCHHHHHHHHHHHHC
Confidence 34568999999999999999998653
No 430
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=36.00 E-value=30 Score=33.08 Aligned_cols=20 Identities=20% Similarity=0.317 Sum_probs=18.2
Q ss_pred ceEEEeCcchHHHHHHHHHH
Q 012532 384 QRFLFLGAGEAGTGIAELIA 403 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~ 403 (461)
.||+|+|||+.|..+|..|.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~ 22 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS 22 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHh
Confidence 58999999999999998886
No 431
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=35.72 E-value=35 Score=33.16 Aligned_cols=34 Identities=26% Similarity=0.411 Sum_probs=26.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.||.|+|||+.|..+|-+++.. ++ -..++|+|.+
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~ 34 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALL-----GV-----AREVVLVDLD 34 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCC
Confidence 3799999999999988876432 43 2479999975
No 432
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=35.72 E-value=31 Score=33.15 Aligned_cols=37 Identities=19% Similarity=0.252 Sum_probs=26.9
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
..||.|+|+|..|..+|..+..+ |.. ...+++++|+.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~-----G~~---~~~~V~v~~r~ 58 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAA-----GVL---AAHKIMASSPD 58 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-----CCC---CcceEEEECCC
Confidence 45899999999999999988643 531 11357777763
No 433
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=35.70 E-value=19 Score=33.61 Aligned_cols=37 Identities=24% Similarity=0.384 Sum_probs=27.6
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCc
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GL 429 (461)
.+..++|+|||.||+..|..+... .|+ ++.++|+..-
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~----~G~-------~V~viEk~~~ 74 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKN----PNV-------QVAIIEQSVS 74 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTS----TTS-------CEEEEESSSS
T ss_pred cccCEEEECccHHHHHHHHHHHHc----CCC-------eEEEEECCCC
Confidence 346899999999999999887531 153 5888887643
No 434
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=35.66 E-value=38 Score=32.87 Aligned_cols=33 Identities=27% Similarity=0.341 Sum_probs=22.7
Q ss_pred HHHHHHhCCCCCCceEEEeC-cchHHHHHHHHHH
Q 012532 371 ISAMKFLGGSLADQRFLFLG-AGEAGTGIAELIA 403 (461)
Q Consensus 371 laAlrv~g~~L~d~rivf~G-AGsAgiGIA~li~ 403 (461)
+.|+...+..-.+++++|.| +|..|..++.++.
T Consensus 152 ~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~ 185 (362)
T 2c0c_A 152 YISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSK 185 (362)
T ss_dssp HHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHH
Confidence 34444344444678999999 5988888777654
No 435
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=35.54 E-value=34 Score=34.10 Aligned_cols=36 Identities=14% Similarity=0.307 Sum_probs=28.4
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCcc
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GLi 430 (461)
+.+++|+|||.+|+..|-.+... |. ++.++|++.-+
T Consensus 6 ~~~v~iiG~G~~gl~~a~~l~~~-----g~-------~v~~~e~~~~~ 41 (433)
T 1d5t_A 6 EYDVIVLGTGLTECILSGIMSVN-----GK-------KVLHMDRNPYY 41 (433)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-----CC-------cEEEEecCCCc
Confidence 45799999999999999887542 53 68899987654
No 436
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=35.51 E-value=46 Score=32.87 Aligned_cols=34 Identities=18% Similarity=0.347 Sum_probs=27.5
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
-.||.|+|||..|..+|..|+.. |+- ..+.++|.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~-----~~~-----~~l~l~D~ 38 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQ-----GIT-----DELVVIDV 38 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CCC-----ceEEEEec
Confidence 46899999999999999988653 541 47899996
No 437
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=35.38 E-value=35 Score=36.25 Aligned_cols=23 Identities=17% Similarity=0.410 Sum_probs=20.2
Q ss_pred CCceEEEeCcchHHHHHHHHHHH
Q 012532 382 ADQRFLFLGAGEAGTGIAELIAL 404 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~ 404 (461)
...+|+|+|||.||+..|..+..
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~ 128 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQS 128 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHH
T ss_pred CCCeEEEECcCHHHHHHHHHHHH
Confidence 45799999999999999998864
No 438
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=35.37 E-value=35 Score=31.89 Aligned_cols=32 Identities=22% Similarity=0.422 Sum_probs=25.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.||.|+|+|..|..+|..+... |. +++++|++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA-----GC-------SVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----CC-------eEEEEcCC
Confidence 4899999999999999988653 53 46777764
No 439
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=35.19 E-value=36 Score=31.78 Aligned_cols=32 Identities=19% Similarity=0.321 Sum_probs=25.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.||.|+|+|..|.++|..+... |. +++++|++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRA-----GF-------DVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHH-----TC-------CEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHHC-----CC-------eEEEEcCC
Confidence 3799999999999999998764 53 46677764
No 440
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=35.18 E-value=31 Score=35.38 Aligned_cols=34 Identities=24% Similarity=0.459 Sum_probs=26.4
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
+--++|+|+|+||+-+|..|.+. |+ ++.++++.+
T Consensus 7 ~~D~iIvG~G~aG~~~A~~L~~~-----g~-------~VlvlE~g~ 40 (546)
T 1kdg_A 7 PYDYIIVGAGPGGIIAADRLSEA-----GK-------KVLLLERGG 40 (546)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSC
T ss_pred ceeEEEECcCHHHHHHHHHHHhC-----CC-------eEEEEeCCC
Confidence 34689999999999999988653 53 588887654
No 441
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=34.95 E-value=57 Score=31.03 Aligned_cols=44 Identities=16% Similarity=0.228 Sum_probs=27.6
Q ss_pred HHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 370 LISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 370 llaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
.+.|++.. ..-.+++++|.|||..|...+.+... .|. +++.+|+
T Consensus 155 a~~~l~~~-~~~~g~~VlV~GaG~vG~~a~qla~~-----~Ga-------~Vi~~~~ 198 (340)
T 3s2e_A 155 VYKGLKVT-DTRPGQWVVISGIGGLGHVAVQYARA-----MGL-------RVAAVDI 198 (340)
T ss_dssp HHHHHHTT-TCCTTSEEEEECCSTTHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred HHHHHHHc-CCCCCCEEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeC
Confidence 35566543 33457899999999877666554432 363 4777765
No 442
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=34.80 E-value=30 Score=32.09 Aligned_cols=31 Identities=19% Similarity=0.308 Sum_probs=24.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 385 rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
||.|+|+|..|..+|..+... |. +++++|++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~-----g~-------~V~~~~~~ 32 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKH-----GY-------PLIIYDVF 32 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred eEEEEeccHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 689999999999999988643 53 46677764
No 443
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=34.78 E-value=31 Score=32.44 Aligned_cols=35 Identities=11% Similarity=0.256 Sum_probs=23.3
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHH
Q 012532 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELI 402 (461)
Q Consensus 368 AgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li 402 (461)
.-|+..++-.=..=+..+++++|||.+|..+|+.+
T Consensus 69 ~~L~~~i~~~Lg~~~~~~V~IvGaG~lG~aLa~~~ 103 (212)
T 3keo_A 69 KKLMNFFAEILNDHSTTNVMLVGCGNIGRALLHYR 103 (212)
T ss_dssp HHHHHHHHHHTTTTSCEEEEEECCSHHHHHHTTCC
T ss_pred HHHHHHHHHHhCCCCCCEEEEECcCHHHHHHHHhh
Confidence 44555544432233457999999999999876653
No 444
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=34.66 E-value=32 Score=37.51 Aligned_cols=33 Identities=24% Similarity=0.316 Sum_probs=26.2
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+-.|+|+|||.||+..|-.++. .|+ ++.+++..
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr-----~G~-------kVlLIEk~ 60 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAAR-----MGQ-------QTLLLTHN 60 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred cCCEEEECChHHHHHHHHHHHh-----CCC-------CEEEEeec
Confidence 4579999999999999887754 364 58888875
No 445
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=34.61 E-value=27 Score=34.12 Aligned_cols=34 Identities=12% Similarity=0.138 Sum_probs=25.9
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+..+|.|+|+|..|..+|..+... |. +++++|++
T Consensus 15 ~~~~I~IIG~G~mG~alA~~L~~~-----G~-------~V~~~~~~ 48 (338)
T 1np3_A 15 QGKKVAIIGYGSQGHAHACNLKDS-----GV-------DVTVGLRS 48 (338)
T ss_dssp HTSCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECCT
T ss_pred cCCEEEEECchHHHHHHHHHHHHC-----cC-------EEEEEECC
Confidence 356899999999999999888543 54 46667654
No 446
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=34.42 E-value=32 Score=35.19 Aligned_cols=28 Identities=18% Similarity=0.221 Sum_probs=23.6
Q ss_pred hCCCCCCceEEEeCcchHHHHHHHHHHH
Q 012532 377 LGGSLADQRFLFLGAGEAGTGIAELIAL 404 (461)
Q Consensus 377 ~g~~L~d~rivf~GAGsAgiGIA~li~~ 404 (461)
.+.+++++||+|+|+|..|+=|+--|+.
T Consensus 240 ~~~~~~gKrV~VVG~G~SA~ei~~~L~~ 267 (501)
T 4b63_A 240 LKDKSKPYNIAVLGSGQSAAEIFHDLQK 267 (501)
T ss_dssp SCCTTSCCEEEEECCSHHHHHHHHHHHH
T ss_pred cccccCCcEEEEECCcHHHHHHHHHHHh
Confidence 3578999999999999999988876654
No 447
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=34.15 E-value=53 Score=31.76 Aligned_cols=33 Identities=18% Similarity=0.178 Sum_probs=21.3
Q ss_pred HHHHHHHh-CCCCCCceEEEeCcchHHHHHHHHH
Q 012532 370 LISAMKFL-GGSLADQRFLFLGAGEAGTGIAELI 402 (461)
Q Consensus 370 llaAlrv~-g~~L~d~rivf~GAGsAgiGIA~li 402 (461)
.+.|++.. ...-.+++++|.|||..|...+.+.
T Consensus 173 a~~al~~~~~~~~~g~~VlV~GaG~vG~~avqla 206 (359)
T 1h2b_A 173 AYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLL 206 (359)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHH
T ss_pred HHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHH
Confidence 45566553 3444678999999986666555443
No 448
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=34.09 E-value=34 Score=35.98 Aligned_cols=36 Identities=22% Similarity=0.169 Sum_probs=27.5
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCcc
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GLi 430 (461)
+..|||+|||.||+..|-.+.+ .|+ ++.++++....
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~-----~G~-------~V~vlEK~~~~ 42 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQ-----SGQ-------TCALLSKVFPT 42 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSCGG
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEecCCCC
Confidence 3479999999999999877653 264 58899987543
No 449
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=34.05 E-value=46 Score=33.18 Aligned_cols=35 Identities=17% Similarity=0.329 Sum_probs=27.8
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
...||.|+|||..|.++|..++.. |+- ..+.++|.
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~-----g~~-----~ev~L~Di 54 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMK-----DLA-----DEVALVDV 54 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHH-----CCC-----SEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CCC-----CeEEEEEC
Confidence 346999999999999999988654 551 36888886
No 450
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=33.75 E-value=66 Score=31.73 Aligned_cols=27 Identities=19% Similarity=0.235 Sum_probs=23.7
Q ss_pred CCCCCCceEEEeCcchHHHHHHHHHHH
Q 012532 378 GGSLADQRFLFLGAGEAGTGIAELIAL 404 (461)
Q Consensus 378 g~~L~d~rivf~GAGsAgiGIA~li~~ 404 (461)
+..|.+.++.|+|.|..|..+|+.+..
T Consensus 136 ~~~l~g~tvGIiG~G~IG~~va~~~~~ 162 (334)
T 3kb6_A 136 ARELNRLTLGVIGTGRIGSRVAMYGLA 162 (334)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHH
T ss_pred cceecCcEEEEECcchHHHHHHHhhcc
Confidence 467889999999999999999998854
No 451
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=33.75 E-value=34 Score=31.89 Aligned_cols=32 Identities=22% Similarity=0.318 Sum_probs=25.2
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GA-GsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.+|.|+|+ |..|..+|..+... |. +++++|++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~-----g~-------~V~~~~r~ 44 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDS-----AH-------HLAAIEIA 44 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHS-----SS-------EEEEECCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-----CC-------EEEEEECC
Confidence 48999999 99999999988542 53 57777753
No 452
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=33.74 E-value=45 Score=31.90 Aligned_cols=34 Identities=24% Similarity=0.306 Sum_probs=27.2
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
..||.|+|+|..|.++|..+... |. ++++++|++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~-----G~------~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQA-----GA------IDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH-----SC------CEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHC-----CC------CeEEEEcCC
Confidence 35899999999999999998765 53 368888873
No 453
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=33.72 E-value=34 Score=31.81 Aligned_cols=32 Identities=16% Similarity=0.302 Sum_probs=24.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.||.|+|+|..|..+|..+... |. +++++|++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA-----GY-------SLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhC-----CC-------EEEEEeCC
Confidence 3899999999999999988542 43 47777763
No 454
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=33.46 E-value=50 Score=32.28 Aligned_cols=37 Identities=22% Similarity=0.101 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHH
Q 012532 366 VLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELI 402 (461)
Q Consensus 366 ~LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li 402 (461)
.++..+.|++..+..-.+++++|.|+|..|...+.+.
T Consensus 179 ~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~aiqla 215 (380)
T 1vj0_A 179 SGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIA 215 (380)
T ss_dssp HHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCCEEEEECcCHHHHHHHHHH
Confidence 4444555665432133568999999998777766554
No 455
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=33.42 E-value=73 Score=30.70 Aligned_cols=38 Identities=16% Similarity=0.211 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeC-cchHHHHHHHHHH
Q 012532 366 VLAGLISAMKFLGGSLADQRFLFLG-AGEAGTGIAELIA 403 (461)
Q Consensus 366 ~LAgllaAlrv~g~~L~d~rivf~G-AGsAgiGIA~li~ 403 (461)
.++..+.|+.....--.+++++|.| +|..|..++.++.
T Consensus 146 ~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~ 184 (354)
T 2j8z_A 146 AWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTR 184 (354)
T ss_dssp HHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHH
Confidence 3344444553233334578999999 5888877776664
No 456
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=33.37 E-value=35 Score=31.76 Aligned_cols=32 Identities=22% Similarity=0.369 Sum_probs=24.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.||.|+|+|..|..+|..+... |. +++++|++
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~ 36 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKE-----GV-------TVYAFDLM 36 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 5899999999999999988542 53 47777763
No 457
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=33.33 E-value=33 Score=30.82 Aligned_cols=26 Identities=23% Similarity=0.319 Sum_probs=19.7
Q ss_pred CCCCCCceEEEeCcchHHHHHHHHHH
Q 012532 378 GGSLADQRFLFLGAGEAGTGIAELIA 403 (461)
Q Consensus 378 g~~L~d~rivf~GAGsAgiGIA~li~ 403 (461)
..+..-.+++|+|||.+|.-+++.+.
T Consensus 7 ~~~~~~k~v~IiGAGg~g~~v~~~l~ 32 (220)
T 4ea9_A 7 SASLAIGGVVIIGGGGHAKVVIESLR 32 (220)
T ss_dssp -CCCCSSCEEEECCSHHHHHHHHHHH
T ss_pred ccccCCCCEEEEcCCHHHHHHHHHHH
Confidence 34445568999999999888887764
No 458
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=33.10 E-value=38 Score=32.97 Aligned_cols=34 Identities=26% Similarity=0.392 Sum_probs=26.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.||.|+|||..|..+|-.++.. |+ -..++++|.+
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~ev~L~Di~ 41 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALR-----QT-----ANELVLIDVF 41 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TC-----SSEEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCC
Confidence 5899999999999988876432 44 2479999975
No 459
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=32.96 E-value=25 Score=35.87 Aligned_cols=22 Identities=32% Similarity=0.522 Sum_probs=20.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHH
Q 012532 384 QRFLFLGAGEAGTGIAELIALE 405 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~ 405 (461)
.||.|+|||+=|+++|..+.+.
T Consensus 35 ~KI~ViGaGsWGTALA~~la~n 56 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAEN 56 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHHc
Confidence 3999999999999999999875
No 460
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=32.83 E-value=71 Score=32.33 Aligned_cols=50 Identities=22% Similarity=0.508 Sum_probs=33.3
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHH---HHHhCCCChh------h-hcCcEEEEcCCCcc
Q 012532 380 SLADQRFLFLGAGEAGTGIAELIALE---ISKQTNMPLE------E-TRKKIWLVDSKGLI 430 (461)
Q Consensus 380 ~L~d~rivf~GAGsAgiGIA~li~~~---m~~~~Gls~e------e-Ar~~i~lvDs~GLi 430 (461)
.++..+++|+|+|..|+-+|..|... +.+ ..++.. . ..++++++.+.|-+
T Consensus 142 ~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~-tdi~~~a~~~l~~~g~~~V~lv~r~~~~ 201 (460)
T 1cjc_A 142 DLSCDTAVILGQGNVALDVARILLTPPDHLEK-TDITEAALGALRQSRVKTVWIVGRRGPL 201 (460)
T ss_dssp CTTSSEEEEESCSHHHHHHHHHHHSCGGGGTT-SCCCHHHHHHHHTCCCCEEEEECSSCGG
T ss_pred CCCCCEEEEECCCHHHHHHHHHHhhchhhhcc-ccccHHHHHHHhhCCCcEEEEEEcCChH
Confidence 35678999999999999999998731 111 111110 0 12479999998865
No 461
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=32.83 E-value=78 Score=30.45 Aligned_cols=33 Identities=6% Similarity=0.073 Sum_probs=22.5
Q ss_pred HHHHHHhCCCCCCceEEEeCc-chHHHHHHHHHH
Q 012532 371 ISAMKFLGGSLADQRFLFLGA-GEAGTGIAELIA 403 (461)
Q Consensus 371 laAlrv~g~~L~d~rivf~GA-GsAgiGIA~li~ 403 (461)
+.|++....--.+++|+|.|| |..|...+.+..
T Consensus 156 ~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak 189 (357)
T 1zsy_A 156 YRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAA 189 (357)
T ss_dssp HHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHH
Confidence 345544444446799999998 888877766553
No 462
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=32.78 E-value=28 Score=34.53 Aligned_cols=23 Identities=9% Similarity=0.294 Sum_probs=19.9
Q ss_pred CCceEEEeCcchHHHHHHHHHHH
Q 012532 382 ADQRFLFLGAGEAGTGIAELIAL 404 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~ 404 (461)
.+++|||+|+|..|+=+|..|..
T Consensus 211 ~~k~VvVvG~G~sg~e~A~~l~~ 233 (447)
T 2gv8_A 211 VGESVLVVGGASSANDLVRHLTP 233 (447)
T ss_dssp TTCCEEEECSSHHHHHHHHHHTT
T ss_pred CCCEEEEEccCcCHHHHHHHHHH
Confidence 46899999999999999988753
No 463
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=32.78 E-value=17 Score=36.52 Aligned_cols=21 Identities=24% Similarity=0.509 Sum_probs=17.8
Q ss_pred CceEEEeCcchHHHHHHHHHH
Q 012532 383 DQRFLFLGAGEAGTGIAELIA 403 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~ 403 (461)
+-=+||+|+|+||+-+|.-|.
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLs 37 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLS 37 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHT
T ss_pred CeeEEEECccHHHHHHHHHHH
Confidence 345899999999999998874
No 464
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=32.66 E-value=1.2e+02 Score=28.59 Aligned_cols=26 Identities=19% Similarity=0.213 Sum_probs=19.2
Q ss_pred CCCCCceEEEeC-cchHHHHHHHHHHH
Q 012532 379 GSLADQRFLFLG-AGEAGTGIAELIAL 404 (461)
Q Consensus 379 ~~L~d~rivf~G-AGsAgiGIA~li~~ 404 (461)
.--.+++++|.| +|..|..++.++..
T Consensus 137 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~ 163 (325)
T 3jyn_A 137 QVKPGEIILFHAAAGGVGSLACQWAKA 163 (325)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHH
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHH
Confidence 334578999999 68888877766643
No 465
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=32.65 E-value=55 Score=31.21 Aligned_cols=34 Identities=15% Similarity=0.082 Sum_probs=22.4
Q ss_pred HHHHHHHH-hCCCCCCceEEEeCcchHHHHHHHHH
Q 012532 369 GLISAMKF-LGGSLADQRFLFLGAGEAGTGIAELI 402 (461)
Q Consensus 369 gllaAlrv-~g~~L~d~rivf~GAGsAgiGIA~li 402 (461)
..+.|++. .+..-.+++++|.|||..|...+.+.
T Consensus 157 ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla 191 (345)
T 3jv7_A 157 TPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQIL 191 (345)
T ss_dssp HHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHH
Confidence 34555555 33445678999999997777665544
No 466
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=32.16 E-value=98 Score=30.50 Aligned_cols=46 Identities=17% Similarity=0.322 Sum_probs=33.3
Q ss_pred HHHHHHHHhcCCCeeeEEeeCCCc-------cHHHHHHHHcCCCceeccCcchHH
Q 012532 316 EFMTAVKQNYGERILIQFEDFANH-------NAFDLLEKYGTTHLVFNDDIQGTA 363 (461)
Q Consensus 316 Efv~av~~~fGp~~lIqfEDF~~~-------nAf~lL~rYr~~~~~FNDDIQGTa 363 (461)
+.+++.-+.|....+|+ |++.. ..+++..+|.-.+|+.+-|-+|++
T Consensus 95 ~V~eaaL~~~~Ga~iIN--dIs~~~~d~~~~~~~~l~a~~ga~vV~mh~d~~G~p 147 (300)
T 3k13_A 95 EVIEAGLKCLQGKSIVN--SISLKEGEEVFLEHARIIKQYGAATVVMAFDEKGQA 147 (300)
T ss_dssp HHHHHHHHHCSSCCEEE--EECSTTCHHHHHHHHHHHHHHTCEEEEESEETTEEC
T ss_pred HHHHHHHHhcCCCCEEE--eCCcccCChhHHHHHHHHHHhCCeEEEEeeCCCCCC
Confidence 66676666663456665 66654 567889999999999988777765
No 467
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=31.96 E-value=41 Score=35.52 Aligned_cols=36 Identities=31% Similarity=0.251 Sum_probs=26.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCc
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GL 429 (461)
..|||+|||.||+..|-.+... |- ..++.++++...
T Consensus 6 ~DVvIVG~G~AGl~aAl~la~~-----G~-----~~~V~vlEk~~~ 41 (602)
T 1kf6_A 6 ADLAIVGAGGAGLRAAIAAAQA-----NP-----NAKIALISKVYP 41 (602)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----CT-----TCCEEEEESSCG
T ss_pred CCEEEECCCHHHHHHHHHHHhc-----CC-----CCcEEEEeCCCC
Confidence 4699999999999999877543 51 025888887643
No 468
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=31.95 E-value=43 Score=30.59 Aligned_cols=35 Identities=20% Similarity=0.350 Sum_probs=26.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
.||.|+|+|..|..+|..+... |.. ..++++++|+
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~-----g~~---~~~~V~~~~r 37 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK-----NIV---SSNQIICSDL 37 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TSS---CGGGEEEECS
T ss_pred CeEEEECccHHHHHHHHHHHhC-----CCC---CCCeEEEEeC
Confidence 4799999999999999988653 531 1236787776
No 469
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=31.91 E-value=37 Score=34.45 Aligned_cols=30 Identities=20% Similarity=0.378 Sum_probs=24.3
Q ss_pred EEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 386 FLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 386 ivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
|||+|||.||+..|-.+.+ .|+ ++.++++.
T Consensus 2 VvVIG~G~AGl~aA~~la~-----~G~-------~V~viek~ 31 (472)
T 2e5v_A 2 IYIIGSGIAGLSAGVALRR-----AGK-------KVTLISKR 31 (472)
T ss_dssp EEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred EEEECCCHHHHHHHHHHHH-----CCC-------CEEEEeCC
Confidence 7999999999999877753 264 58889876
No 470
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=31.53 E-value=38 Score=36.79 Aligned_cols=34 Identities=26% Similarity=0.341 Sum_probs=26.9
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.+-.|+|+|||.||+..|-.++.. |+ ++.+++..
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~-----G~-------kVlLIEk~ 53 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARG-----GL-------HCLLITSD 53 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESC
T ss_pred CcCCEEEECccHHHHHHHHHHHHC-----CC-------cEEEEEec
Confidence 346899999999999999877542 64 58888876
No 471
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=31.44 E-value=33 Score=37.87 Aligned_cols=32 Identities=31% Similarity=0.376 Sum_probs=25.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
++|-|+|||..|-|||..++.+ |+ .++++|.+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~a-----G~-------~V~l~D~~ 348 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARV-----GI-------SVVAVESD 348 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEECSS
T ss_pred cEEEEEcccHHHHHHHHHHHhC-----CC-------chhcccch
Confidence 6999999999999999887643 76 47777753
No 472
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=31.36 E-value=56 Score=30.26 Aligned_cols=35 Identities=20% Similarity=0.206 Sum_probs=26.3
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
-.+|.|+|+|..|..+|..+... |. ..+++++|++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~-----g~-----~~~V~~~d~~ 40 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRD-----HP-----HYKIVGYNRS 40 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSS
T ss_pred cceEEEEeeCHHHHHHHHHHHhC-----CC-----CcEEEEEcCC
Confidence 35899999999999999988653 32 1357777764
No 473
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=31.21 E-value=31 Score=33.55 Aligned_cols=34 Identities=24% Similarity=0.361 Sum_probs=26.6
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 385 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 385 rivf~GA-GsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
||+|+|| |..|..+|..|+. .|+ -..++++|.+-
T Consensus 2 KI~IiGa~G~VG~~la~~L~~-----~~~-----~~ev~L~Di~~ 36 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKN-----SPL-----VSRLTLYDIAH 36 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHT-----CTT-----CSEEEEEESSS
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CcEEEEEeCCc
Confidence 7999998 9999998877642 354 24699999865
No 474
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=30.98 E-value=22 Score=34.39 Aligned_cols=31 Identities=16% Similarity=0.400 Sum_probs=24.6
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 385 rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
||.|+|+|..|..+|..+..+ | .+++++|+.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~-----G-------~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKK-----C-------REVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTT-----E-------EEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhC-----C-------CEEEEEECC
Confidence 899999999999999888532 4 257777764
No 475
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=30.77 E-value=34 Score=37.37 Aligned_cols=32 Identities=28% Similarity=0.544 Sum_probs=26.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.+|.|+|+|..|.|||..++.+ |. .++++|.+
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~a-----G~-------~V~l~D~~ 344 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILS-----NY-------PVILKEVN 344 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT-----TC-------CEEEECSS
T ss_pred cEEEEEcCCHhhHHHHHHHHhC-----CC-------EEEEEECC
Confidence 5799999999999999998653 65 47788864
No 476
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=30.77 E-value=51 Score=35.88 Aligned_cols=36 Identities=31% Similarity=0.305 Sum_probs=28.0
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 380 ~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+..=.+|.|+|+|..|.|||..++.+ |. +++++|.+
T Consensus 311 ~~~i~kV~VIGaG~MG~~iA~~la~a-----G~-------~V~l~D~~ 346 (715)
T 1wdk_A 311 AKDVKQAAVLGAGIMGGGIAYQSASK-----GT-------PILMKDIN 346 (715)
T ss_dssp CCCCSSEEEECCHHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred cccCCEEEEECCChhhHHHHHHHHhC-----CC-------EEEEEECC
Confidence 33446899999999999999998654 65 47888863
No 477
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=30.62 E-value=69 Score=30.68 Aligned_cols=42 Identities=14% Similarity=0.188 Sum_probs=26.1
Q ss_pred HHHHHhCCCCCCceEEEe-CcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 372 SAMKFLGGSLADQRFLFL-GAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 372 aAlrv~g~~L~d~rivf~-GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
++++..+ .-.++++||. |+|..|...+.+.... |. +++.+|+
T Consensus 155 ~~~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~-----Ga-------~Vi~~~~ 197 (349)
T 3pi7_A 155 AMFDIVK-QEGEKAFVMTAGASQLCKLIIGLAKEE-----GF-------RPIVTVR 197 (349)
T ss_dssp HHHHHHH-HHCCSEEEESSTTSHHHHHHHHHHHHH-----TC-------EEEEEES
T ss_pred HHHHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHC-----CC-------EEEEEeC
Confidence 5566555 3345677776 7787777777655432 63 4777764
No 478
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=30.58 E-value=22 Score=36.84 Aligned_cols=27 Identities=22% Similarity=0.397 Sum_probs=19.5
Q ss_pred CCCCCCceEEEeCcchHHHHHHHHHHH
Q 012532 378 GGSLADQRFLFLGAGEAGTGIAELIAL 404 (461)
Q Consensus 378 g~~L~d~rivf~GAGsAgiGIA~li~~ 404 (461)
+..++..+|+|+|||.+|-.+|+.|+.
T Consensus 18 ~~~l~~k~VlIiGAGgiG~aia~~L~~ 44 (467)
T 2axq_A 18 EGRHMGKNVLLLGSGFVAQPVIDTLAA 44 (467)
T ss_dssp -----CEEEEEECCSTTHHHHHHHHHT
T ss_pred ccCCCCCEEEEECChHHHHHHHHHHHh
Confidence 567778899999999999999888753
No 479
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=30.38 E-value=34 Score=32.70 Aligned_cols=41 Identities=15% Similarity=0.289 Sum_probs=27.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCC
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~G 428 (461)
..||.|+|+|..|..+|..+... |........+++++|++.
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~-----g~~~~~~~~~V~~~~r~~ 48 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGN-----AAQLAQFDPRVTMWVFEE 48 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-----HHHCTTEEEEEEEECCCC
T ss_pred CCeEEEECCCHHHHHHHHHHHhc-----CCcccCCCCeEEEEEcCh
Confidence 36899999999999999998765 210000013588888753
No 480
>3fys_A Protein DEGV; fatty acid-binding, EDD fold, fatty acid-binding protein; HET: PLM; 2.50A {Bacillus subtilis}
Probab=30.05 E-value=49 Score=32.65 Aligned_cols=152 Identities=14% Similarity=0.172 Sum_probs=73.9
Q ss_pred CCcccccccCcchHHHHHhcCCCCCceEEEEecCceeeccCCCCCCccccchhhhhhHhhhcCCCCCCeeeEEeecCCCc
Q 012532 209 PQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNN 288 (461)
Q Consensus 209 p~GlYis~~d~g~i~~il~Nwp~~~v~viVVTDGerILGLGDlG~~GmgI~iGKl~LYta~gGI~P~~~LPV~LDvGTnN 288 (461)
|||--++--|-|+ |--.+..++.+|||.+.=| |.--+. --||. .+|+.+-+| +
T Consensus 16 ~~~~~~~~~~~~~------~~~~~~Mki~IvTDSt~dL------------~~e~~~----~~~I~---vvPL~v~~~--~ 68 (315)
T 3fys_A 16 PRGSHMASMTGGQ------QMGRGSMNIAVVTDSTAYI------------PKEMRE----QHQIH---MIPLQVVFR--E 68 (315)
T ss_dssp ------------------------CCCEEEEEEGGGCC------------CHHHHH----HHTEE---EECCEEECS--S
T ss_pred cCccccccccchh------hhCcCCCcEEEEEECCCCC------------CHHHHH----hCCeE---EEeEEEEEC--C
Confidence 6665555444443 2233335799999987533 322111 12566 888888775 3
Q ss_pred cccccCcccccccccccchhhhHHHHHHHHHHHHH--hcCCCeeeEEeeCCCccHHHHHHHHc---CC---CceeccCcc
Q 012532 289 EKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQ--NYGERILIQFEDFANHNAFDLLEKYG---TT---HLVFNDDIQ 360 (461)
Q Consensus 289 e~LL~DplYlGlr~~R~~geeY~~fvdEfv~av~~--~fGp~~lIqfEDF~~~nAf~lL~rYr---~~---~~~FNDDIQ 360 (461)
++..++. -++ .+||.+.++. .. |+ =+.|+--++++.|+ ++ +.+++
T Consensus 69 ~~Y~D~~--------di~-------~~efy~~m~~~~~~-p~-------TSqPs~~~~~~~fe~l~~~~~~Ii~I~---- 121 (315)
T 3fys_A 69 ETYREEI--------ELD-------WKSFYEEVKKHNEL-PT-------TSQPPIGELVALYEELGKSYDAVISIH---- 121 (315)
T ss_dssp CEEEBTT--------TBC-------HHHHHHHHHTTTCC-CE-------EECCCHHHHHHHHHHHTTTCSEEEEEE----
T ss_pred EEEECCC--------CCC-------HHHHHHHHHhCCCC-cc-------cCCCCHHHHHHHHHHHHhcCCcEEEEe----
Confidence 3333221 011 3666666654 22 31 23344444444443 22 22221
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHH--HHHhCCC-Chhhh
Q 012532 361 GTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALE--ISKQTNM-PLEET 417 (461)
Q Consensus 361 GTaaV~LAgllaAlrv~g~~L~d~rivf~GAGsAgiGIA~li~~~--m~~~~Gl-s~eeA 417 (461)
=+-.|+|-.++.+.....+.+.+|-++=..+++.|.+-++..+ |.+ +|. |.||.
T Consensus 122 --iSS~LSGTy~sA~~Aa~~~~~~~I~ViDS~~~s~g~g~lv~~Aa~l~~-~G~~s~eeI 178 (315)
T 3fys_A 122 --LSSGISGTFSSAAAADSMVDNIDVYPFDSEISCLAQGFYALKAAELIK-NGASSPEDI 178 (315)
T ss_dssp --SCTTTCSHHHHHHHGGGGCSSCEEEEEECSSCHHHHHHHHHHHHHHHH-TTCCCHHHH
T ss_pred --CCCcHhHHHHHHHHHHHhCCCCCEEEECCchhHHHHHHHHHHHHHHHH-cCCCCHHHH
Confidence 1223444455555555566777898888888888877777654 444 699 98874
No 481
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=29.90 E-value=63 Score=28.68 Aligned_cols=36 Identities=28% Similarity=0.380 Sum_probs=24.1
Q ss_pred CCCCceEEEeCc-chHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 380 SLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 380 ~L~d~rivf~GA-GsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+|++.++||.|| |-.|..+|+.++. .|. +++++|++
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~-----~G~-------~V~~~~r~ 40 (244)
T 3d3w_A 4 FLAGRRVLVTGAGKGIGRGTVQALHA-----TGA-------RVVAVSRT 40 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHH-----TTC-------EEEEEESC
T ss_pred ccCCcEEEEECCCcHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 578889999998 5556666666543 253 47777653
No 482
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=29.56 E-value=47 Score=37.05 Aligned_cols=23 Identities=17% Similarity=0.410 Sum_probs=20.3
Q ss_pred CCceEEEeCcchHHHHHHHHHHH
Q 012532 382 ADQRFLFLGAGEAGTGIAELIAL 404 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~ 404 (461)
...+|+|+|||.||+..|..+..
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~ 299 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQS 299 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHH
Confidence 45799999999999999999864
No 483
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=29.38 E-value=65 Score=27.26 Aligned_cols=33 Identities=12% Similarity=0.229 Sum_probs=23.8
Q ss_pred CceEEEeCc-chHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 383 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 383 d~rivf~GA-GsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
..+|+|.|| |-.|..+++.+++. |. ++++++++
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~-----g~-------~V~~~~r~ 36 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQA-----GY-------EVTVLVRD 36 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT-----TC-------EEEEEESC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHC-----CC-------eEEEEEeC
Confidence 368999998 88888887777542 52 57777764
No 484
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=29.36 E-value=1.3e+02 Score=28.68 Aligned_cols=35 Identities=20% Similarity=0.271 Sum_probs=23.4
Q ss_pred CCCCceEEEeCcc-hHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 380 SLADQRFLFLGAG-EAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 380 ~L~d~rivf~GAG-sAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
--.+++++|.||| ..|..++.++.. .|. +++.+|+
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~-----~Ga-------~Vi~~~~ 177 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQI-----LNF-------RLIAVTR 177 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHH-----HTC-------EEEEEES
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHH-----cCC-------EEEEEeC
Confidence 3457899999997 677766655432 253 4777775
No 485
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=29.32 E-value=67 Score=33.43 Aligned_cols=37 Identities=16% Similarity=0.376 Sum_probs=29.1
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCc
Q 012532 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (461)
Q Consensus 381 L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GL 429 (461)
+.++||+|+|+|..|+=+|..|... | +++.++.+..-
T Consensus 189 ~~~krV~VIG~G~sgve~a~~l~~~-----~-------~~Vtv~~r~~~ 225 (549)
T 4ap3_A 189 FTGKRVGVIGTGSSGIQSIPIIAEQ-----A-------EQLFVFQRSAN 225 (549)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHH-----B-------SEEEEEESSCC
T ss_pred cCCCEEEEECCCchHHHHHHHHHhh-----C-------CEEEEEECCCC
Confidence 4578999999999999888777543 2 46888888764
No 486
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=29.14 E-value=44 Score=35.52 Aligned_cols=36 Identities=17% Similarity=0.231 Sum_probs=28.5
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCcc
Q 012532 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (461)
Q Consensus 383 d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GLi 430 (461)
+..+||+|+|.||+..|..+.+. |+ ++.++++.-..
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~-----G~-------~V~liE~~~~~ 81 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGA-----GY-------KVAMFDIGEID 81 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSCCC
T ss_pred cCCEEEECCcHHHHHHHHHHHhC-----CC-------cEEEEeccCCC
Confidence 35799999999999999888653 65 68999986544
No 487
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=29.00 E-value=36 Score=31.62 Aligned_cols=22 Identities=23% Similarity=0.421 Sum_probs=19.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHH
Q 012532 384 QRFLFLGAGEAGTGIAELIALE 405 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~ 405 (461)
.||.|+|+|..|..+|..+..+
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~ 30 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALR 30 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhC
Confidence 3799999999999999988754
No 488
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=28.99 E-value=37 Score=35.63 Aligned_cols=40 Identities=18% Similarity=0.398 Sum_probs=24.3
Q ss_pred HHhCCCCCCce----EEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 375 KFLGGSLADQR----FLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 375 rv~g~~L~d~r----ivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
+.++.+.+||. ++|+|||+||.-.|....+ .|+ ++-|+++
T Consensus 30 ~~~~~~~~~~~ydYDviVIG~GpaG~~aA~~aa~-----~G~-------kValIE~ 73 (542)
T 4b1b_A 30 ELTKNKVEEHTYDYDYVVIGGGPGGMASAKEAAA-----HGA-------RVLLFDY 73 (542)
T ss_dssp ---------CCSSEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECC
T ss_pred hhccccCcCCCCCCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEec
Confidence 34555666774 8999999999998876643 364 6889985
No 489
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=28.97 E-value=36 Score=30.78 Aligned_cols=21 Identities=29% Similarity=0.602 Sum_probs=18.9
Q ss_pred ceEEEeCcchHHHHHHHHHHH
Q 012532 384 QRFLFLGAGEAGTGIAELIAL 404 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~ 404 (461)
.||.|+|+|..|..+|..+..
T Consensus 24 mkI~IIG~G~mG~~la~~l~~ 44 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTA 44 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHh
Confidence 589999999999999998865
No 490
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=28.33 E-value=57 Score=29.71 Aligned_cols=34 Identities=15% Similarity=0.283 Sum_probs=24.7
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+..+|+|.|||-.|..+++.++.. |. +++.++++
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~-----g~-------~V~~~~r~ 35 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQ-----GH-------EVTGLRRS 35 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEECT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 356899999998888888877543 53 46666654
No 491
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=28.09 E-value=63 Score=32.17 Aligned_cols=37 Identities=24% Similarity=0.501 Sum_probs=27.6
Q ss_pred CCCceEEEeCc-chHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 381 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 381 L~d~rivf~GA-GsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+...||.|+|| |..|..+|-.++. .|+. ..+.++|.+
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~-----~g~~-----~evvLiDi~ 43 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAM-----MRLT-----PNLCLYDPF 43 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHH-----TTCC-----SCEEEECSC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHh-----cCCC-----CEEEEEeCC
Confidence 35679999998 9999999965543 3652 369999973
No 492
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=28.07 E-value=23 Score=37.51 Aligned_cols=20 Identities=35% Similarity=0.637 Sum_probs=17.5
Q ss_pred eEEEeCcchHHHHHHHHHHH
Q 012532 385 RFLFLGAGEAGTGIAELIAL 404 (461)
Q Consensus 385 rivf~GAGsAgiGIA~li~~ 404 (461)
=+||+|||+||+-+|..+.+
T Consensus 8 DyIVVGgG~AG~v~A~rLse 27 (577)
T 3q9t_A 8 DFVIVGGGTAGNTVAGRLAE 27 (577)
T ss_dssp EEEEESCSHHHHHHHHHHTT
T ss_pred cEEEECCcHHHHHHHHHHHh
Confidence 48999999999999988853
No 493
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=28.02 E-value=41 Score=34.76 Aligned_cols=35 Identities=14% Similarity=0.232 Sum_probs=25.8
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcC
Q 012532 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (461)
Q Consensus 380 ~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs 426 (461)
.++..+|.|+|+|..|..+|..+... |. +++++|+
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~~r 46 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESR-----GY-------TVSIFNR 46 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTT-----TC-------CEEEECS
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhC-----CC-------eEEEEeC
Confidence 35677899999999999999998643 54 4666765
No 494
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=28.01 E-value=62 Score=30.36 Aligned_cols=38 Identities=16% Similarity=0.242 Sum_probs=25.5
Q ss_pred CCCCCCceEEEeCcch---HHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 378 GGSLADQRFLFLGAGE---AGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 378 g~~L~d~rivf~GAGs---AgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
..+|++.++||.||++ .|.+||+.++. .|. +++++|++
T Consensus 25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~-----~G~-------~V~~~~r~ 65 (296)
T 3k31_A 25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCA-----QGA-------EVALTYLS 65 (296)
T ss_dssp CCTTTTCEEEEECCCSTTSHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred hhccCCCEEEEEeCCCCCCHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 3468889999999963 34446666543 363 58888875
No 495
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=27.82 E-value=29 Score=36.94 Aligned_cols=23 Identities=17% Similarity=0.445 Sum_probs=19.0
Q ss_pred CCCc--eEEEeCcchHHHHHHHHHH
Q 012532 381 LADQ--RFLFLGAGEAGTGIAELIA 403 (461)
Q Consensus 381 L~d~--rivf~GAGsAgiGIA~li~ 403 (461)
+.++ -+||+|||+||+-+|..|.
T Consensus 15 ~~~~~yDyIIVGgG~AG~vlA~RLs 39 (583)
T 3qvp_A 15 VSGRTVDYIIAGGGLTGLTTAARLT 39 (583)
T ss_dssp TTTCEEEEEEECCSHHHHHHHHHHT
T ss_pred cCCCCccEEEECCcHHHHHHHHHHH
Confidence 4444 5799999999999998884
No 496
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=27.70 E-value=37 Score=34.51 Aligned_cols=35 Identities=23% Similarity=0.372 Sum_probs=25.9
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
+..+++|+|||.||+..|..+... |. .++.++|+.
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~-----g~------~~v~v~E~~ 42 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTEL-----GY------KNWHLYECN 42 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHT-----TC------CSEEEEESS
T ss_pred cCCCEEEECcCHHHHHHHHHHHHc-----CC------CCEEEEeCC
Confidence 356899999999999999887543 41 246667665
No 497
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=27.50 E-value=75 Score=30.46 Aligned_cols=38 Identities=16% Similarity=0.261 Sum_probs=26.4
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 379 ~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
++|+++.+||-||++ ||.+-++..+.+ +|. +++++|++
T Consensus 25 ~rL~gKvalVTGas~---GIG~aiA~~la~-~Ga-------~V~i~~r~ 62 (273)
T 4fgs_A 25 QRLNAKIAVITGATS---GIGLAAAKRFVA-EGA-------RVFITGRR 62 (273)
T ss_dssp CTTTTCEEEEESCSS---HHHHHHHHHHHH-TTC-------EEEEEESC
T ss_pred chhCCCEEEEeCcCC---HHHHHHHHHHHH-CCC-------EEEEEECC
Confidence 468999999999864 444556666655 374 58888863
No 498
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=27.46 E-value=41 Score=32.44 Aligned_cols=33 Identities=27% Similarity=0.358 Sum_probs=25.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 384 ~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
.+|.|+|+|..|.++|..+... |. .+++++|++
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~-----G~------~~V~~~dr~ 57 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR-----NA------ARLAAYDLR 57 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECGG
T ss_pred CeEEEECccHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 5799999999999999988643 51 257778764
No 499
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=27.42 E-value=73 Score=29.42 Aligned_cols=39 Identities=15% Similarity=0.192 Sum_probs=25.3
Q ss_pred CCCCCCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCC
Q 012532 378 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (461)
Q Consensus 378 g~~L~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~ 427 (461)
..+++++++||-||+. ||...|+..+.+ .|. +++++|++
T Consensus 9 ~~~~~~k~vlVTGas~---GIG~aia~~l~~-~G~-------~V~~~~r~ 47 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSS---GIGLAVVDALVR-YGA-------KVVSVSLD 47 (269)
T ss_dssp -CTTTTCEEEESSTTS---HHHHHHHHHHHH-TTC-------EEEEEESC
T ss_pred ccCCCCCEEEEeCCCC---HHHHHHHHHHHH-CCC-------EEEEEeCC
Confidence 4678899999999853 444445555544 363 57777764
No 500
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=27.37 E-value=35 Score=33.79 Aligned_cols=39 Identities=26% Similarity=0.389 Sum_probs=28.6
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhCCCChhhhcCcEEEEcCCCcc
Q 012532 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (461)
Q Consensus 382 ~d~rivf~GAGsAgiGIA~li~~~m~~~~Gls~eeAr~~i~lvDs~GLi 430 (461)
.+.+|+|+|+|.||+..|..+...- .|. ++.++|+...+
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~---~g~-------~V~v~e~~~~~ 102 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNR---PDL-------KVCIIESSVAP 102 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHC---TTS-------CEEEECSSSSC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcC---CCC-------eEEEEecCccc
Confidence 3468999999999999998886531 143 58888876443
Done!