Query 012534
Match_columns 461
No_of_seqs 313 out of 1877
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 11:18:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012534.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012534hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hdt_A 3-hydroxyisobutyryl-COA 100.0 8.4E-72 2.9E-76 567.2 38.3 340 63-455 6-345 (353)
2 3ju1_A Enoyl-COA hydratase/iso 100.0 1.6E-67 5.5E-72 544.2 33.9 350 65-454 41-396 (407)
3 3bpt_A 3-hydroxyisobutyryl-COA 100.0 1.9E-65 6.4E-70 522.8 37.5 341 65-452 5-349 (363)
4 3hrx_A Probable enoyl-COA hydr 100.0 6E-60 2E-64 460.3 23.0 253 68-435 2-254 (254)
5 4fzw_C 1,2-epoxyphenylacetyl-C 100.0 4.3E-59 1.5E-63 458.9 28.5 261 65-435 14-274 (274)
6 4fzw_A 2,3-dehydroadipyl-COA h 100.0 2.6E-59 8.9E-64 456.6 23.2 254 66-435 5-258 (258)
7 3kqf_A Enoyl-COA hydratase/iso 100.0 3.7E-57 1.3E-61 443.1 25.8 261 63-435 5-265 (265)
8 3g64_A Putative enoyl-COA hydr 100.0 5.8E-56 2E-60 437.8 29.5 263 63-435 14-277 (279)
9 3i47_A Enoyl COA hydratase/iso 100.0 4.1E-56 1.4E-60 436.3 25.3 262 64-437 2-264 (268)
10 3p5m_A Enoyl-COA hydratase/iso 100.0 7.2E-56 2.5E-60 431.7 26.1 252 64-435 4-255 (255)
11 3h81_A Enoyl-COA hydratase ECH 100.0 1.8E-56 6.2E-61 440.8 22.0 257 63-435 22-278 (278)
12 3gow_A PAAG, probable enoyl-CO 100.0 5.8E-56 2E-60 432.1 25.0 253 68-435 2-254 (254)
13 3pea_A Enoyl-COA hydratase/iso 100.0 4.2E-56 1.4E-60 434.7 22.6 257 65-435 5-261 (261)
14 3moy_A Probable enoyl-COA hydr 100.0 2.1E-56 7.2E-61 437.3 20.2 257 63-435 6-263 (263)
15 3sll_A Probable enoyl-COA hydr 100.0 2.3E-55 7.7E-60 435.7 26.3 264 66-436 24-290 (290)
16 1dci_A Dienoyl-COA isomerase; 100.0 8.6E-55 2.9E-59 428.6 29.3 269 65-434 2-274 (275)
17 3hin_A Putative 3-hydroxybutyr 100.0 2.9E-56 1E-60 438.6 18.3 258 63-436 13-270 (275)
18 3fdu_A Putative enoyl-COA hydr 100.0 1.4E-55 4.8E-60 432.1 22.5 256 65-435 4-259 (266)
19 3swx_A Probable enoyl-COA hydr 100.0 6E-56 2E-60 434.6 19.4 257 65-435 8-265 (265)
20 4f47_A Enoyl-COA hydratase ECH 100.0 2.1E-55 7.1E-60 433.7 22.2 258 64-435 18-278 (278)
21 3r9t_A ECHA1_1; ssgcid, seattl 100.0 7E-56 2.4E-60 434.5 18.5 257 65-435 8-267 (267)
22 3qre_A Enoyl-COA hydratase, EC 100.0 1.9E-56 6.4E-61 444.8 14.6 270 63-438 26-297 (298)
23 1nzy_A Dehalogenase, 4-chlorob 100.0 3.3E-55 1.1E-59 430.3 23.0 262 67-437 4-265 (269)
24 2ej5_A Enoyl-COA hydratase sub 100.0 5.5E-55 1.9E-59 426.0 24.4 255 66-435 3-257 (257)
25 3rsi_A Putative enoyl-COA hydr 100.0 4.5E-55 1.5E-59 428.4 23.9 254 65-435 8-265 (265)
26 3myb_A Enoyl-COA hydratase; ss 100.0 8.6E-55 2.9E-59 430.6 26.1 260 63-437 22-283 (286)
27 3tlf_A Enoyl-COA hydratase/iso 100.0 1.4E-55 5E-60 433.9 18.4 262 66-435 11-274 (274)
28 3hp0_A Putative polyketide bio 100.0 1.6E-54 5.4E-59 424.7 25.4 257 63-436 4-260 (267)
29 2pbp_A Enoyl-COA hydratase sub 100.0 1.1E-54 3.8E-59 424.0 23.3 255 65-435 4-258 (258)
30 3qxz_A Enoyl-COA hydratase/iso 100.0 3.1E-56 1.1E-60 436.6 12.0 257 65-436 6-265 (265)
31 3trr_A Probable enoyl-COA hydr 100.0 4.4E-55 1.5E-59 426.3 20.0 250 66-435 7-256 (256)
32 1ef8_A Methylmalonyl COA decar 100.0 3.4E-55 1.2E-59 428.4 18.9 257 64-435 2-261 (261)
33 3lke_A Enoyl-COA hydratase; ny 100.0 8.9E-55 3E-59 425.8 21.8 260 64-433 2-263 (263)
34 1hzd_A AUH, AU-binding protein 100.0 9.5E-55 3.3E-59 427.6 21.5 254 74-435 19-272 (272)
35 2ppy_A Enoyl-COA hydratase; be 100.0 5.3E-54 1.8E-58 420.8 26.6 255 64-434 7-264 (265)
36 2vx2_A Enoyl-COA hydratase dom 100.0 2.5E-54 8.6E-59 427.5 24.4 256 65-434 32-287 (287)
37 2j5i_A P-hydroxycinnamoyl COA 100.0 2.3E-54 7.9E-59 425.7 23.8 264 63-435 6-274 (276)
38 2fbm_A Y chromosome chromodoma 100.0 3E-54 1E-58 427.6 24.6 262 63-435 20-283 (291)
39 3qk8_A Enoyl-COA hydratase ECH 100.0 1.5E-54 5.2E-59 426.1 22.3 261 63-436 10-270 (272)
40 4eml_A Naphthoate synthase; 1, 100.0 7.6E-55 2.6E-59 428.8 19.7 260 64-436 8-272 (275)
41 3t89_A 1,4-dihydroxy-2-naphtho 100.0 1.5E-54 5.2E-59 429.3 21.9 264 62-436 23-286 (289)
42 3r9q_A Enoyl-COA hydratase/iso 100.0 5.2E-55 1.8E-59 427.1 17.6 252 65-434 10-261 (262)
43 3qxi_A Enoyl-COA hydratase ECH 100.0 1E-54 3.4E-59 425.8 19.2 254 63-435 12-265 (265)
44 3gkb_A Putative enoyl-COA hydr 100.0 5E-55 1.7E-59 432.4 16.5 262 63-439 6-272 (287)
45 1mj3_A Enoyl-COA hydratase, mi 100.0 1.9E-54 6.4E-59 422.9 19.5 256 65-435 3-260 (260)
46 3oc7_A Enoyl-COA hydratase; se 100.0 1.7E-53 5.7E-58 417.7 25.9 257 66-434 7-267 (267)
47 1wz8_A Enoyl-COA hydratase; ly 100.0 1.3E-53 4.5E-58 417.8 24.1 256 65-433 9-264 (264)
48 1uiy_A Enoyl-COA hydratase; ly 100.0 2E-53 6.8E-58 414.0 25.0 252 68-432 2-253 (253)
49 3qmj_A Enoyl-COA hydratase, EC 100.0 3.3E-54 1.1E-58 420.2 19.1 251 64-426 4-254 (256)
50 2gtr_A CDY-like, chromodomain 100.0 6.1E-54 2.1E-58 419.5 20.3 258 64-432 3-261 (261)
51 2uzf_A Naphthoate synthase; ly 100.0 1.1E-53 3.9E-58 420.1 22.0 258 64-436 11-270 (273)
52 3t8b_A 1,4-dihydroxy-2-naphtho 100.0 2.8E-54 9.4E-59 434.7 17.7 271 64-436 53-331 (334)
53 3rrv_A Enoyl-COA hydratase/iso 100.0 1E-52 3.5E-57 413.7 26.5 248 66-426 28-275 (276)
54 3he2_A Enoyl-COA hydratase ECH 100.0 8E-54 2.7E-58 418.6 18.2 248 62-435 17-264 (264)
55 2f6q_A Peroxisomal 3,2-trans-e 100.0 1.2E-52 4.2E-57 414.2 22.6 256 64-430 24-279 (280)
56 3lao_A Enoyl-COA hydratase/iso 100.0 9E-54 3.1E-58 417.6 13.9 249 63-423 9-258 (258)
57 3pe8_A Enoyl-COA hydratase; em 100.0 2.4E-53 8.3E-58 413.8 15.6 247 64-433 7-256 (256)
58 4di1_A Enoyl-COA hydratase ECH 100.0 5E-52 1.7E-56 408.8 24.5 250 66-440 24-275 (277)
59 2a7k_A CARB; crotonase, antibi 100.0 2.2E-52 7.6E-57 405.9 20.9 246 68-426 2-248 (250)
60 3h0u_A Putative enoyl-COA hydr 100.0 1.4E-52 4.9E-57 415.2 19.8 252 63-424 5-257 (289)
61 3l3s_A Enoyl-COA hydratase/iso 100.0 9.6E-52 3.3E-56 404.3 22.8 253 64-423 4-256 (263)
62 1sg4_A 3,2-trans-enoyl-COA iso 100.0 3.8E-52 1.3E-56 406.5 18.6 250 68-431 7-258 (260)
63 3isa_A Putative enoyl-COA hydr 100.0 1.7E-51 5.7E-56 400.6 20.4 244 68-436 9-252 (254)
64 2q35_A CURF; crotonase, lyase; 100.0 3.7E-51 1.3E-55 395.7 16.9 239 68-423 5-243 (243)
65 1pjh_A Enoyl-COA isomerase; EC 100.0 1.5E-49 5E-54 392.3 21.2 195 63-278 6-202 (280)
66 3m6n_A RPFF protein; enoyl-COA 100.0 7.6E-48 2.6E-52 384.2 29.4 254 63-424 27-293 (305)
67 2j5g_A ALR4455 protein; enzyme 100.0 5.7E-49 1.9E-53 384.4 19.5 240 63-426 20-261 (263)
68 3njd_A Enoyl-COA hydratase; ss 100.0 1.7E-48 5.9E-53 393.3 20.1 281 63-438 32-329 (333)
69 3r6h_A Enoyl-COA hydratase, EC 100.0 6E-48 2E-52 371.0 20.6 227 66-406 5-231 (233)
70 3ot6_A Enoyl-COA hydratase/iso 100.0 2.3E-47 7.9E-52 366.6 22.9 225 66-406 6-231 (232)
71 1szo_A 6-oxocamphor hydrolase; 100.0 1.7E-47 5.9E-52 372.8 19.5 236 65-424 15-251 (257)
72 3t3w_A Enoyl-COA hydratase; ss 100.0 1.7E-47 5.9E-52 377.2 18.8 254 63-434 17-270 (279)
73 2np9_A DPGC; protein inhibitor 100.0 2.4E-47 8E-52 394.4 18.2 249 65-426 166-437 (440)
74 3zwc_A Peroxisomal bifunctiona 100.0 1.1E-45 3.7E-50 405.9 20.2 267 73-424 27-293 (742)
75 2wtb_A MFP2, fatty acid multif 100.0 1.3E-45 4.6E-50 406.4 18.3 296 64-435 5-301 (725)
76 1wdk_A Fatty oxidation complex 100.0 1.9E-44 6.5E-49 397.0 23.9 295 66-432 6-302 (715)
77 2w3p_A Benzoyl-COA-dihydrodiol 100.0 2.9E-41 1E-45 352.2 16.5 188 64-282 19-227 (556)
78 3bf0_A Protease 4; bacterial, 99.8 3E-22 1E-26 216.0 4.6 169 74-288 300-515 (593)
79 3rst_A Signal peptide peptidas 99.8 3.5E-19 1.2E-23 171.4 14.6 168 74-288 2-224 (240)
80 3viv_A 441AA long hypothetical 99.8 1.8E-18 6.3E-23 164.7 13.2 148 74-277 7-174 (230)
81 2f9y_B Acetyl-coenzyme A carbo 99.6 7.4E-15 2.5E-19 145.4 11.3 153 77-287 120-273 (304)
82 1y7o_A ATP-dependent CLP prote 99.5 2.9E-14 9.8E-19 135.0 13.1 141 90-279 53-214 (218)
83 2f9i_A Acetyl-coenzyme A carbo 99.5 6.3E-13 2.2E-17 132.7 15.3 153 74-277 115-276 (327)
84 2f9y_A Acetyl-COA carboxylase, 99.5 7.8E-13 2.7E-17 132.6 15.9 140 87-277 151-290 (339)
85 2cby_A ATP-dependent CLP prote 98.9 8.2E-09 2.8E-13 96.7 11.0 138 90-277 35-192 (208)
86 3qwd_A ATP-dependent CLP prote 98.4 2.3E-06 7.9E-11 79.6 13.1 140 90-279 35-194 (203)
87 2f6i_A ATP-dependent CLP prote 98.4 3.8E-06 1.3E-10 78.9 14.0 138 90-278 47-204 (215)
88 1yg6_A ATP-dependent CLP prote 98.4 9.3E-07 3.2E-11 81.7 9.3 138 90-277 34-191 (193)
89 1tg6_A Putative ATP-dependent 98.3 5.9E-06 2E-10 80.2 12.7 145 79-278 84-248 (277)
90 3p2l_A ATP-dependent CLP prote 98.1 7.5E-06 2.6E-10 76.0 9.7 135 90-277 38-195 (201)
91 1pix_A Glutaconyl-COA decarbox 97.9 4.3E-05 1.5E-09 81.6 10.5 156 77-279 107-273 (587)
92 4gm2_A ATP-dependent CLP prote 97.8 0.00026 9E-09 65.6 13.2 101 177-278 86-205 (205)
93 2f9i_B Acetyl-coenzyme A carbo 97.6 0.0018 6.1E-08 63.1 16.8 148 77-282 123-271 (285)
94 3bf0_A Protease 4; bacterial, 97.5 0.00038 1.3E-08 74.9 11.6 87 95-226 71-158 (593)
95 3iav_A Propionyl-COA carboxyla 97.5 0.0017 5.8E-08 68.4 15.7 138 77-278 99-244 (530)
96 3n6r_B Propionyl-COA carboxyla 97.2 0.0042 1.4E-07 65.4 15.1 139 77-279 107-253 (531)
97 1on3_A Methylmalonyl-COA carbo 97.2 0.0029 9.8E-08 66.8 13.7 138 77-278 97-241 (523)
98 2bzr_A Propionyl-COA carboxyla 97.1 0.0065 2.2E-07 64.3 14.9 138 77-278 110-255 (548)
99 2w3p_A Benzoyl-COA-dihydrodiol 97.1 0.028 9.7E-07 59.0 19.2 188 65-281 265-479 (556)
100 1x0u_A Hypothetical methylmalo 97.0 0.0022 7.6E-08 67.6 10.5 138 77-278 93-239 (522)
101 1x0u_A Hypothetical methylmalo 96.7 0.0096 3.3E-07 62.8 11.6 159 77-282 327-496 (522)
102 3u9r_B MCC beta, methylcrotony 96.6 0.0067 2.3E-07 64.2 10.3 143 77-279 123-273 (555)
103 1vrg_A Propionyl-COA carboxyla 96.3 0.033 1.1E-06 58.7 13.1 138 77-278 100-245 (527)
104 3gf3_A Glutaconyl-COA decarbox 95.8 0.033 1.1E-06 59.3 10.4 162 77-279 108-276 (588)
105 1vrg_A Propionyl-COA carboxyla 95.5 0.1 3.5E-06 54.9 12.8 153 81-281 335-500 (527)
106 2bzr_A Propionyl-COA carboxyla 95.4 0.11 3.9E-06 54.8 12.5 157 77-281 349-521 (548)
107 1on3_A Methylmalonyl-COA carbo 95.2 0.068 2.3E-06 56.3 10.1 154 81-281 331-496 (523)
108 3n6r_B Propionyl-COA carboxyla 95.0 0.11 3.7E-06 54.7 10.9 155 80-281 342-504 (531)
109 1pix_A Glutaconyl-COA decarbox 93.5 0.92 3.1E-05 48.3 14.2 146 88-281 384-549 (587)
110 3u9r_B MCC beta, methylcrotony 93.2 0.68 2.3E-05 48.9 12.5 141 89-281 366-530 (555)
111 3iav_A Propionyl-COA carboxyla 92.2 0.82 2.8E-05 48.1 11.4 154 80-281 336-503 (530)
112 3gf3_A Glutaconyl-COA decarbox 91.7 1.5 5E-05 46.7 12.8 146 89-282 387-552 (588)
113 3k8x_A Acetyl-COA carboxylase; 90.2 0.18 6.1E-06 54.9 4.0 36 186-221 245-280 (758)
114 2x24_A Acetyl-COA carboxylase; 87.7 0.33 1.1E-05 53.2 4.0 37 186-222 258-294 (793)
115 3k8x_A Acetyl-COA carboxylase; 81.4 2.9 0.0001 45.5 7.7 109 89-239 447-559 (758)
116 2x24_A Acetyl-COA carboxylase; 79.2 7.6 0.00026 42.6 10.1 103 89-235 462-569 (793)
117 1oi7_A Succinyl-COA synthetase 61.9 18 0.00061 34.6 7.4 15 185-199 224-238 (288)
118 2nu8_A Succinyl-COA ligase [AD 58.4 20 0.00068 34.3 7.0 15 185-199 224-238 (288)
119 2yv1_A Succinyl-COA ligase [AD 55.0 18 0.00062 34.7 6.1 15 185-199 229-243 (294)
120 2yv2_A Succinyl-COA synthetase 48.7 29 0.00098 33.3 6.4 15 185-199 232-246 (297)
121 3dmy_A Protein FDRA; predicted 43.1 38 0.0013 34.9 6.6 23 99-121 159-181 (480)
122 2fp4_A Succinyl-COA ligase [GD 43.1 31 0.0011 33.2 5.7 15 185-199 236-250 (305)
123 3mwd_B ATP-citrate synthase; A 41.7 31 0.0011 33.8 5.5 15 185-199 249-263 (334)
124 2csu_A 457AA long hypothetical 36.3 37 0.0013 34.6 5.3 15 186-200 228-242 (457)
125 3pff_A ATP-citrate synthase; p 26.9 54 0.0019 36.2 4.8 16 185-200 735-750 (829)
126 3t6o_A Sulfate transporter/ant 20.6 1.4E+02 0.0047 23.7 5.1 57 65-125 4-60 (121)
No 1
>4hdt_A 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carnitinyl-COA dehydratase, enoyl-COA hydratase/ISOM mycobacterium thermoresistibIle; 1.60A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=8.4e-72 Score=567.16 Aligned_cols=340 Identities=38% Similarity=0.667 Sum_probs=303.6
Q ss_pred CCccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcC
Q 012534 63 GAEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDR 142 (461)
Q Consensus 63 ~~~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~ 142 (461)
..++.|++++ +|+|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||+|+++||+|+|++++......+
T Consensus 6 ~~~e~vl~e~-~~~Va~itLnrP~~~NAl~~~m~~~l~~al~~~~~d~~vr~vvltg~G~~~FcaG~Dl~~~~~~~~~~- 83 (353)
T 4hdt_A 6 AKNEDVLVNV-EGGVGLLTLNRPKAINSLTHGMVTTMAERLAAWENDDSVRAVLLTGAGERGLCAGGDVVAIYHSAKAD- 83 (353)
T ss_dssp --CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSBSBCCBCHHHHHHHHHTT-
T ss_pred CCCCcEEEEE-ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEEeCCCCCEecCcCHHHHhhccchh-
Confidence 3567899998 79999999999999999999999999999999999999999999999988999999999987643221
Q ss_pred CCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEec
Q 012534 143 NTPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 222 (461)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~ 222 (461)
......++...+.++..|.++||||||+|||+|+|||++|+++|||||++++++|++
T Consensus 84 -----------------------~~~~~~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~ 140 (353)
T 4hdt_A 84 -----------------------GAEARRFWFDEYRLNAHIGRYPKPYVSIMDGIVMGGGVGVGAHGNVRVVTDTTKMAM 140 (353)
T ss_dssp -----------------------SHHHHHHHHHHHHHHHHHHHCSSCEEEEECBEEETHHHHHHTTSSEEEECTTCEEEC
T ss_pred -----------------------hHHHHHHHHHHHHHHHHHHHCCCCEEEEeECceeecCccccCCcCeeccchhccccC
Confidence 112345677778899999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHH
Q 012534 223 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 302 (461)
Q Consensus 223 pe~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~ 302 (461)
||+++|++|++|++++|+|++| . ++++|+|||+.|+ |+||+++||||+|||+++|.+.+.+++.. .+..
T Consensus 141 pe~~iGl~p~~g~~~~l~rl~g-~-~a~~l~ltG~~i~-A~eA~~~GLv~~vv~~~~l~~~a~~la~~--------~~~~ 209 (353)
T 4hdt_A 141 PEVGIGFIPDVGGTYLLSRAPG-K-LGLHAALTGAPFS-GADAIVMGFADHYVPHDKIDEFTRAVIAD--------GVDA 209 (353)
T ss_dssp CGGGGTCCCCTTHHHHHHTSST-T-HHHHHHHHCCCBC-HHHHHHHTSCSEECCGGGHHHHHHHHHHH--------CHHH
T ss_pred cccccccCCCccceehhhhhhh-H-HHHHHHhcCCCCC-HHHHHHcCCCcEEeCHHHHHHHHHHHHHh--------chhH
Confidence 9999999999999999999999 4 8999999999999 99999999999999999999988888654 3556
Q ss_pred HHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 012534 303 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 382 (461)
Q Consensus 303 ~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~ 382 (461)
.+..+...++ ...+......|++||+.+ ++++|+++|+.... .|+.++++.|+++||.|++++|++++++.
T Consensus 210 ~l~~~~~~~~-~~~l~~~~~~i~~~f~~~-~~~~i~~~L~~~~~-------~~a~~~a~~la~~sP~a~~~~k~~l~~~~ 280 (353)
T 4hdt_A 210 ALAAHAQEPP-ASPLAEQRSWIDECYTGD-TVADIIAALRAHDA-------PAAGEAADLIATRSPIALSVTLESVRRAA 280 (353)
T ss_dssp HHHHHCBCCC-CCHHHHTHHHHHHHTTCS-SHHHHHHHHHHHCS-------HHHHHHHHHHTTSCHHHHHHHHHHHHHHT
T ss_pred HHHHhcccCC-ccchHHHHHHHHHHhCCC-CHHHHHHHHHhccc-------HHHHHHHHHHHhcCcHHHHHHHHHHHHhc
Confidence 6677765543 456778899999999998 99999999998874 89999999999999999999999999886
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCCCccCCCHHHHhccccCCCCC
Q 012534 383 SAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTG 455 (461)
Q Consensus 383 ~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~~~~~v~~~~v~~~f~p~~~~ 455 (461)
...+++++++.|++.+..++.++||+|||+|||++|+|+|+|+|++++||++++|++||+|+++|
T Consensus 281 --------~~~sl~e~l~~E~~~~~~~~~s~D~~EGvrAfl~dekR~P~w~p~~l~~V~~~~v~~~f~p~~~e 345 (353)
T 4hdt_A 281 --------KLQSLEDTLRQEYRVSCASLKSHDLVEGIRAQLVDKDRNPKWRPATLAEVTEADVEAYFAPVDPE 345 (353)
T ss_dssp --------TCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHC----CCCCSSCSGGGCCHHHHHGGGCCCSSC
T ss_pred --------cCCCHHHHHHHHHHHHHHHhCCchHHHHHhhhhhCcCCCCCCCCCChhhCCHHHHHHHcCCCCCC
Confidence 24589999999999999999999999999999987779999999999999999999999999865
No 2
>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis}
Probab=100.00 E-value=1.6e-67 Score=544.20 Aligned_cols=350 Identities=31% Similarity=0.530 Sum_probs=306.2
Q ss_pred ccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCC
Q 012534 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNT 144 (461)
Q Consensus 65 ~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~ 144 (461)
++.|.++. +++|++||||||+++|+||.+|+.+|.++|+.++.|+++|+|||||.|+++||+|+|++++..........
T Consensus 41 ~~~v~~~~-~~~V~~ItLnrP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltG~G~~~FcaG~Dl~~~~~~~~~~~~~ 119 (407)
T 3ju1_A 41 FQTLATAS-GKLVGVVTLNVEKALNALDLDMVRAMTVQLNLWKKDPLIACVVLDGSGEKAFCAGGDVRALYHASVAAKGQ 119 (407)
T ss_dssp EEEEECTT-SCEEEEEEECCGGGTSCBCHHHHHHHHHHHHHHHHCTTEEEEEEEESSSSEEECCBCCHHHHHHHHHHTSS
T ss_pred cceEEEEE-ECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEecCCCCcccCCCChhhhhhcccccccc
Confidence 56677776 79999999999999999999999999999999999999999999999878999999999987643211000
Q ss_pred CCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEeccc
Q 012534 145 PLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPE 224 (461)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe 224 (461)
.......++...+.++.+|.++||||||+|||+|+|||++|+++||||||+++++|++||
T Consensus 120 --------------------~~~~~~~~~~~~~~l~~~i~~~~kPvIAaVnG~a~GgG~~LalacD~ria~~~a~f~~pe 179 (407)
T 3ju1_A 120 --------------------VTEVAKVFFEEEYRLDYLLHTYGKPVLVWGDGIVMGGGLGLMAGASHKVVTETSRIAMPE 179 (407)
T ss_dssp --------------------CCHHHHHHHHHHHHHHHHHHTCSSCEEEECCSEEETHHHHHHHHCSEEEECTTCEEECGG
T ss_pred --------------------cHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCccccCcchHHhcCCEEEEcCCCEEeChH
Confidence 001234466667788999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCh---HHHHH
Q 012534 225 NGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDP---HQDIV 301 (461)
Q Consensus 225 ~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~---~~~~~ 301 (461)
+++|++|++|++++|+|++| . +|++|+|||+.|+ |+||+++||||+|||++++.++.++|....+..++ ...+.
T Consensus 180 ~~lGl~P~~G~t~~L~rl~g-~-~A~~l~ltG~~i~-A~eA~~~GLv~~vv~~~~l~~~~~~L~~~~~~~~~~~~~~~a~ 256 (407)
T 3ju1_A 180 VTIGLYPDVGGSYFLNRMPG-K-MGLFLGLTAYHMN-AADACYVGLADHYLNRDDKELMFDAMATLDWSDSPALNHQRLD 256 (407)
T ss_dssp GGGTCCSCTTHHHHTTTSST-T-HHHHHHHHCCCBC-HHHHHHHTSCSEECCGGGHHHHHHHHHSSCCCSCHHHHHHHHH
T ss_pred hhcCCCCCchHHHHHhhhhH-H-HHHHHHHcCCcCc-HHHHHHCCCccEEcCHHHHHHHHHHHhcccccccccchhHHHH
Confidence 99999999999999999999 6 9999999999999 99999999999999999999888888877665543 23355
Q ss_pred HHHHhhc---CCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHH
Q 012534 302 ALLAKYS---SDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYF 378 (461)
Q Consensus 302 ~~l~~~~---~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l 378 (461)
+++++|. ..+.+...+..+.+.|++||+ + |+++|+++|++... + .+||++++++|+++||.|++++|+++
T Consensus 257 ~~l~~~~~~~~~~~~~~~l~~~~~~I~~~f~-~-sv~~i~~~L~~~~~--~---~~~a~~~a~~la~~sP~sl~~tk~~l 329 (407)
T 3ju1_A 257 TMINELSNQVDIPKGDSVLAESQEMIDRLMA-G-SLTDIVTRMSTLST--D---EAWLSKACATMLAGSPISWHLAYIQT 329 (407)
T ss_dssp HHHHHHHTTCSSCCCCCHHHHTHHHHHHHTC-S-CHHHHHHHHHHCCC--S---CHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred HHHHHhhhhccccCCchhHHHHHHHHHHHhc-C-CHHHHHHHHHhccc--c---cHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 5565553 223456678889999999999 5 99999999987432 1 38999999999999999999999999
Q ss_pred HHHhhhcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCCCccCCCHHHHhccccCCCC
Q 012534 379 SKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGT 454 (461)
Q Consensus 379 ~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~~~~~v~~~~v~~~f~p~~~ 454 (461)
+++. ..++.++++.|++....++.++||+|||+||++||+|+|+|++++++||+++.|+++|+|.|.
T Consensus 330 ~~~~---------~~~l~~~l~~E~~~~~~~~~s~D~~EGvrAflidKdr~P~w~~~~l~~V~~~~v~~~f~~~~~ 396 (407)
T 3ju1_A 330 QLGT---------KLSLAQCFKWELTVSVNVCAKGDFCEGVRALLIDKDKQPKWQFADVQSVPNSVIEDILTSPWG 396 (407)
T ss_dssp HTTT---------CSCHHHHHHHHHHHHHHHHHHSSHHHHHHHHTTSCCCCCCCSSSSTTTSCHHHHHHHHSCCC-
T ss_pred Hhhh---------cCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcCCcCCCCCCCChHhCCHHHHHHHhCCCCC
Confidence 9876 568999999999999999999999999999998898999999999999999999999999874
No 3
>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens}
Probab=100.00 E-value=1.9e-65 Score=522.78 Aligned_cols=341 Identities=39% Similarity=0.641 Sum_probs=297.8
Q ss_pred ccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCC
Q 012534 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNT 144 (461)
Q Consensus 65 ~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~ 144 (461)
.+.|.++. +++|++||||||+++|+||.+|+.+|.++|+.++.|+++|+|||||.|+++||+|+|++++........ .
T Consensus 5 ~~~v~~~~-~~~v~~itLnrP~~~Nal~~~m~~~L~~al~~~~~d~~vr~vVltG~g~~~FcaG~Dl~~~~~~~~~~~-~ 82 (363)
T 3bpt_A 5 AEEVLLGK-KGCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQ-K 82 (363)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEETTSSEEECCBCHHHHHHHHTSSC-C
T ss_pred CcceEEEE-ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCcccCCcCHHHHHhhccccc-H
Confidence 45677877 789999999999999999999999999999999999999999999998789999999999865321110 0
Q ss_pred CCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEeccc
Q 012534 145 PLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPE 224 (461)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe 224 (461)
....++...+.++..|.++||||||+|||+|+|||++|+++||||||+++++|++||
T Consensus 83 -----------------------~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe 139 (363)
T 3bpt_A 83 -----------------------IAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPE 139 (363)
T ss_dssp -----------------------CHHHHHHHHHHHHHHHHTCSSCEEEEECSEEETHHHHTTTTSSEEEECTTCEEECCG
T ss_pred -----------------------HHHHHHHHHHHHHHHHHhCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCeEEeCCc
Confidence 011244445667788999999999999999999999999999999999999999999
Q ss_pred cccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHHH
Q 012534 225 NGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALL 304 (461)
Q Consensus 225 ~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~l 304 (461)
+++|++|++|++++|++++|. +|++|+|||+.|+ |+||+++||||+|||++++.+.+++++...+. +...+..++
T Consensus 140 ~~~Gl~p~~g~~~~L~r~~g~--~a~~l~ltg~~i~-A~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~--~~~~i~~~~ 214 (363)
T 3bpt_A 140 TAIGLFPDVGGGYFLPRLQGK--LGYFLALTGFRLK-GRDVYRAGIATHFVDSEKLAMLEEDLLALKSP--SKENIASVL 214 (363)
T ss_dssp GGTTSCCCTTHHHHHHHSSTT--HHHHHHHHCCCEE-THHHHHTTSCSEECCGGGHHHHHHHHHHCSSC--CHHHHHHHH
T ss_pred cccCCCCCchHHHHHHHhhHH--HHHHHHHcCCCCC-HHHHHHCCCcceecCHHHHHHHHHHHHhcccC--CHHHHHHHH
Confidence 999999999999999999994 8999999999999 99999999999999999998777777654332 345677777
Q ss_pred HhhcCC----CCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 012534 305 AKYSSD----PEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSK 380 (461)
Q Consensus 305 ~~~~~~----~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~ 380 (461)
+.|... .+....+......|++||+.+ ++.+|+++|++.. .+|+.+++++|+++||.|++.+|+++++
T Consensus 215 ~~~~~~~~~~~~~~~~l~~~~~~i~~~f~~~-~~~ei~~al~~~~-------~~~a~~~a~~la~~sP~al~~~k~~l~~ 286 (363)
T 3bpt_A 215 ENYHTESKIDRDKSFILEEHMDKINSCFSAN-TVEEIIENLQQDG-------SSFALEQLKVINKMSPTSLKITLRQLME 286 (363)
T ss_dssp HHHHHHCCTTTTCCCTTGGGHHHHHHHTTSS-SHHHHHHHHHHHC-------CHHHHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred HHHHhhhcccCCCchhhHHHHHHHHHHhCCC-CHHHHHHHHhccC-------hHHHHHHHHHHHhCCchHHHHHHHHHHH
Confidence 777531 222456777889999999987 9999999998863 3899999999999999999999999998
Q ss_pred HhhhcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCCCccCCCHHHHhccccCC
Q 012534 381 VASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPL 452 (461)
Q Consensus 381 ~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~~~~~v~~~~v~~~f~p~ 452 (461)
+. ..++.++++.|.+.+..++.++||+|||+||+++|+|+|+|++++++||+++.|++||+|+
T Consensus 287 ~~---------~~~l~~~l~~E~~~~~~~~~s~D~~EGv~Afl~eK~r~P~~~~~~~~~v~~~~v~~~f~~~ 349 (363)
T 3bpt_A 287 GS---------SKTLQEVLTMEYRLSQACMRGHDFHEGVRAVLIDKDQSPKWKPADLKEVTEEDLNNHFKSL 349 (363)
T ss_dssp HT---------TSCHHHHHHHHHHHHHHHHTSSHHHHHHHHHTTSCCCCCCCSSCSGGGSCHHHHHHHHSCC
T ss_pred HH---------hCCHHHHHHHHHHHHHHHhcCccHHhhhhheeeCCCCCCCCCCCChhhCCHHHHHHHhcCC
Confidence 76 5689999999999999999999999999999977778999999999999999999999997
No 4
>3hrx_A Probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus}
Probab=100.00 E-value=6e-60 Score=460.27 Aligned_cols=253 Identities=26% Similarity=0.375 Sum_probs=229.2
Q ss_pred eEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCCC
Q 012534 68 VKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLV 147 (461)
Q Consensus 68 i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~ 147 (461)
|++|+ +|+|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.....
T Consensus 2 vl~E~-~dgVa~itlnrP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~-------- 71 (254)
T 3hrx_A 2 VLKER-QDGVLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAG-RAFSAGQDLTEFGDRKP-------- 71 (254)
T ss_dssp EEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEST-TCSBCCBCGGGTTTSCC--------
T ss_pred eEEEE-ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEeCCC-CCcccCccHHHhcccch--------
Confidence 56776 799999999999999999999999999999999999999999999997 89999999998643110
Q ss_pred CCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEecccccc
Q 012534 148 PKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGI 227 (461)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~l 227 (461)
....+....+.++..|.++||||||+|||+|+|||++|+++|||||++++++|++||+++
T Consensus 72 --------------------~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~l 131 (254)
T 3hrx_A 72 --------------------DYEAHLRRYNRVVEALSGLEKPLVVAVNGVAAGAGMSLALWGDLRLAAVGASFTTAFVRI 131 (254)
T ss_dssp --------------------CHHHHTHHHHHHHHHHHTCSSCEEEEECSEEETHHHHHHTTCSEEEEETTCEEECCGGGG
T ss_pred --------------------hhHHHHHHHHHHHHHHHhCCCCEEEEECCEeeehhhhhhhccceeeEcCCCEEEchhhCc
Confidence 012245556678889999999999999999999999999999999999999999999999
Q ss_pred CCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHHHHhh
Q 012534 228 GLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKY 307 (461)
Q Consensus 228 Gl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~l~~~ 307 (461)
|++|++|++++|++++|.. +|++|++||+.|+ |+||+++||||++||++++.+.+.
T Consensus 132 Gl~p~~g~~~~L~r~vG~~-~A~~llltg~~i~-A~eA~~~GLv~~vv~~~~l~~~a~---------------------- 187 (254)
T 3hrx_A 132 GLVPDSGLSFLLPRLVGLA-KAQELLLLSPRLS-AEEALALGLVHRVVPAEKLMEEAL---------------------- 187 (254)
T ss_dssp TCCCCTTHHHHHHHHHCHH-HHHHHHHHCCCEE-HHHHHHHTSCSEEECGGGHHHHHH----------------------
T ss_pred CcCCcccHHHHHHHHhCcc-hHHHHhhcCcccC-HHHHHHCCCeEEecCcHHHHHHHH----------------------
Confidence 9999999999999999998 9999999999999 999999999999999988864322
Q ss_pred cCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhcCC
Q 012534 308 SSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGK 387 (461)
Q Consensus 308 ~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~ 387 (461)
++|+ +|+++||.+++.+|++++...
T Consensus 188 ----------------------------------------------~~a~----~la~~~~~a~~~~K~~~~~~~----- 212 (254)
T 3hrx_A 188 ----------------------------------------------SLAK----ELAQGPTRAYALTKKLLLETY----- 212 (254)
T ss_dssp ----------------------------------------------HHHH----HHHTSCHHHHHHHHHHHHHGG-----
T ss_pred ----------------------------------------------HHHH----HhhccchHHHHHHHHHHHHHH-----
Confidence 3444 799999999999999999987
Q ss_pred CccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCC
Q 012534 388 TDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 435 (461)
Q Consensus 388 ~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~ 435 (461)
..++.++++.|...+..++.++|++||++||+ +| |+|+|+++
T Consensus 213 ----~~~~~~~l~~e~~~~~~~~~s~d~~Eg~~AF~-eK-R~P~f~Gr 254 (254)
T 3hrx_A 213 ----RLSLTEALALEAVLQGQAGQTQDHEEGVRAFR-EK-RPPRFQGR 254 (254)
T ss_dssp ----GSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHH-TT-SCCCCCCC
T ss_pred ----cCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHh-CC-CCCCCCCC
Confidence 57899999999999999999999999999999 78 89999985
No 5
>4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=100.00 E-value=4.3e-59 Score=458.85 Aligned_cols=261 Identities=25% Similarity=0.412 Sum_probs=226.8
Q ss_pred ccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCC
Q 012534 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNT 144 (461)
Q Consensus 65 ~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~ 144 (461)
+++|+++. +|||++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.........
T Consensus 14 ~e~il~~~-~~gVa~itlnRP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~G-~~FcaG~Dl~~~~~~~~~~~~- 90 (274)
T 4fzw_C 14 MEFILSHV-EKGVMTLTLNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAG-RGFCAGQDLNDRNVDPTGPAP- 90 (274)
T ss_dssp --CEEEEE-ETTEEEEEECCTTTTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESS-SCSBCCBCCC---------CC-
T ss_pred cccEEEEE-ECCEEEEEEcCcCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CceeCCcChHhhhccccccch-
Confidence 46788887 799999999999999999999999999999999999999999999998 899999999987643211110
Q ss_pred CCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEeccc
Q 012534 145 PLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPE 224 (461)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe 224 (461)
+....+....+.++..|.++||||||+|||+|+|||++|+++|||||++++++|++||
T Consensus 91 ----------------------~~~~~~~~~~~~l~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe 148 (274)
T 4fzw_C 91 ----------------------DLGMSVERFYNPLVRRLAKLPKPVICAVNGVAAGAGATLALGGDIVIAARSAKFVMAF 148 (274)
T ss_dssp ----------------------CHHHHHHHTHHHHHHHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCG
T ss_pred ----------------------HHHHHHHHHHHHHHHHHHHCCCCEEEEECCceeecCceeeeccceEEECCCCEEECcc
Confidence 0122234445568889999999999999999999999999999999999999999999
Q ss_pred cccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHHH
Q 012534 225 NGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALL 304 (461)
Q Consensus 225 ~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~l 304 (461)
+++|++|++|++++|++++|.. ++++|+|||+.|+ |+||+++||||+|||++++.+.+.
T Consensus 149 ~~~Gl~p~~g~~~~L~r~vG~~-~A~~llltg~~i~-A~eA~~~GLv~~vv~~~~l~~~a~------------------- 207 (274)
T 4fzw_C 149 SKLGLIPDCGGTWLLPRVAGRA-RAMGLALLGNQLS-AEQAHEWGMIWQVVDDETLADTAQ------------------- 207 (274)
T ss_dssp GGTTCCCTTTHHHHHHHHTCHH-HHHHHHHHCCCEE-HHHHHHTTSSSEEECGGGHHHHHH-------------------
T ss_pred cCcccCCCccHHHHHHHHhhHH-HHHHHHHhCCcCC-HHHHHHCCCceEEeChHHHHHHHH-------------------
Confidence 9999999999999999999998 9999999999999 999999999999999988764322
Q ss_pred HhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhh
Q 012534 305 AKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASA 384 (461)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~~ 384 (461)
++|+ +|+.+||.+++.+|++++...
T Consensus 208 -------------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~~~-- 232 (274)
T 4fzw_C 208 -------------------------------------------------QLAR----HLATQPTFGLGLIKQAINSAE-- 232 (274)
T ss_dssp -------------------------------------------------HHHH----HHTTSCHHHHHHHHHHHHHHT--
T ss_pred -------------------------------------------------HHHH----HHHcCCHHHHHHHHHHHHHhh--
Confidence 4444 799999999999999999887
Q ss_pred cCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCC
Q 012534 385 HGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 435 (461)
Q Consensus 385 ~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~ 435 (461)
..+++++++.|.+.+..++.++|++||++||+ +| |+|+|+++
T Consensus 233 -------~~~l~~~l~~e~~~~~~~~~s~d~~Egv~AF~-eK-R~P~f~Gr 274 (274)
T 4fzw_C 233 -------TNTLDTQLDLERDYQRLAGRSADYREGVSAFL-AK-RSPQFTGK 274 (274)
T ss_dssp -------SSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHH-C--CCCCCCCC
T ss_pred -------hCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHh-CC-CCCCCCCC
Confidence 67899999999999999999999999999999 78 89999975
No 6
>4fzw_A 2,3-dehydroadipyl-COA hydratase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=100.00 E-value=2.6e-59 Score=456.62 Aligned_cols=254 Identities=22% Similarity=0.323 Sum_probs=228.9
Q ss_pred cceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCC
Q 012534 66 EFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTP 145 (461)
Q Consensus 66 ~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~ 145 (461)
+.|.+++ +|+|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++......
T Consensus 5 s~l~ve~-~~~Va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~FcaG~Dl~~~~~~~~~----- 77 (258)
T 4fzw_A 5 SELIVSR-QQRVLLLTLNRPAARNALNNALLMQLVNELEAAATDTSISVCVITGNA-RFFAAGADLNEMAEKDLA----- 77 (258)
T ss_dssp CEEEEEE-ETTEEEEEEECGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCS-SEEEECBCHHHHHTCCHH-----
T ss_pred CcEEEEE-ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEeCCC-CceeCCCchhhhccchhh-----
Confidence 4488887 799999999999999999999999999999999999999999999998 899999999987632110
Q ss_pred CCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEecccc
Q 012534 146 LVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPEN 225 (461)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe~ 225 (461)
..+....+.++.+|.++||||||+|||+|+|||++|+++|||||++++++|++||+
T Consensus 78 ------------------------~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~ 133 (258)
T 4fzw_A 78 ------------------------ATLNDTRPQLWARLQAFNKPLIAAVNGYALGAGCELALLCDVVVAGENARFGLPEI 133 (258)
T ss_dssp ------------------------HHHTCSHHHHHHHHHTCCSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGG
T ss_pred ------------------------hHHHhHHHHHHHHHHHCCCCEEEEEcCcceeeeeEeecccceEEECCCCEEECccc
Confidence 01222234577789999999999999999999999999999999999999999999
Q ss_pred ccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHHHH
Q 012534 226 GIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLA 305 (461)
Q Consensus 226 ~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~l~ 305 (461)
++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||+|||++++.+.+.
T Consensus 134 ~~Gl~p~~g~~~~l~r~vG~~-~A~~llltg~~i~-a~eA~~~GLv~~vv~~~~l~~~a~-------------------- 191 (258)
T 4fzw_A 134 TLGIMPGAGGTQRLIRSVGKS-LASKMVLSGESIT-AQQAQQAGLVSDVFPSDLTLEYAL-------------------- 191 (258)
T ss_dssp GGTCCCCSSHHHHHHHHHCHH-HHHHHHHHCCCEE-HHHHHHHTSCSEEECTTTHHHHHH--------------------
T ss_pred CCCcCCCchHHHHHHHHhCHH-HHHHHHHcCCcCc-HHHHHHCCCeeEEeCchHHHHHHH--------------------
Confidence 999999999999999999998 9999999999999 999999999999999998874322
Q ss_pred hhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhc
Q 012534 306 KYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAH 385 (461)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~~~ 385 (461)
++|+ +|+++||.+++.+|++++...
T Consensus 192 ------------------------------------------------~~a~----~la~~~p~a~~~~K~~l~~~~--- 216 (258)
T 4fzw_A 192 ------------------------------------------------QLAS----KMARHSPLALQAAKQALRQSQ--- 216 (258)
T ss_dssp ------------------------------------------------HHHH----HHTTSCHHHHHHHHHHHHHHT---
T ss_pred ------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHHhh---
Confidence 3444 799999999999999999887
Q ss_pred CCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCC
Q 012534 386 GKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 435 (461)
Q Consensus 386 ~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~ 435 (461)
..+++++++.|.+.+..++.++|++||++||+ +| |+|+|+++
T Consensus 217 ------~~~l~~~l~~e~~~~~~~~~s~d~~Eg~~AF~-eK-R~P~f~Gr 258 (258)
T 4fzw_A 217 ------EVALQAGLAQERQLFTLLAATEDRHEGISAFL-QK-RTPDFKGR 258 (258)
T ss_dssp ------TSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHH-TT-SCCCCCCC
T ss_pred ------cCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHh-CC-CCCCCCCC
Confidence 57899999999999999999999999999999 78 89999985
No 7
>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis}
Probab=100.00 E-value=3.7e-57 Score=443.12 Aligned_cols=261 Identities=21% Similarity=0.302 Sum_probs=233.6
Q ss_pred CCccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcC
Q 012534 63 GAEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDR 142 (461)
Q Consensus 63 ~~~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~ 142 (461)
+.++.|.++..+++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|+++||+|+|++++....
T Consensus 5 m~~~~v~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~---- 80 (265)
T 3kqf_A 5 LQLQNISVDYATPHVVKISLNRERQANSLSLALLEELQNILTQINEEANTRVVILTGAGEKAFCAGADLKERAGMN---- 80 (265)
T ss_dssp --CCSEEEECCSTTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCHHHHTTCC----
T ss_pred ccCCeEEEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCeeeeCcChHHHhccC----
Confidence 3567899982379999999999999999999999999999999999999999999999878999999999875311
Q ss_pred CCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEec
Q 012534 143 NTPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 222 (461)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~ 222 (461)
......+....+.++.+|.++||||||+|||+|+|||++|+++|||||++++++|++
T Consensus 81 -----------------------~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~ 137 (265)
T 3kqf_A 81 -----------------------EEQVRHAVSMIRTTMEMVEQLPQPVIAAINGIALGGGTELSLACDFRIAAESASLGL 137 (265)
T ss_dssp -----------------------HHHHHHHHHHHHHHHHHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEEC
T ss_pred -----------------------HHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCcEEEC
Confidence 011233556667788899999999999999999999999999999999999999999
Q ss_pred cccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHH
Q 012534 223 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 302 (461)
Q Consensus 223 pe~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~ 302 (461)
||+++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||+|||++++.+.+.
T Consensus 138 pe~~~Gl~p~~g~~~~L~r~vG~~-~A~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a~----------------- 198 (265)
T 3kqf_A 138 TETTLAIIPGAGGTQRLPRLIGVG-RAKELIYTGRRIS-AQEAKEYGLVEFVVPVHLLEEKAI----------------- 198 (265)
T ss_dssp CGGGGTCCCCSSHHHHHHHHHCHH-HHHHHHHHCCCEE-HHHHHHHTSCSEEECGGGHHHHHH-----------------
T ss_pred cccccCcCCCccHHHHHHHHhCHH-HHHHHHHcCCCCC-HHHHHHCCCccEEeCHHHHHHHHH-----------------
Confidence 999999999999999999999998 9999999999999 999999999999999888764322
Q ss_pred HHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 012534 303 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 382 (461)
Q Consensus 303 ~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~ 382 (461)
+||+ +|+++||.+++.+|++++...
T Consensus 199 ---------------------------------------------------~~a~----~la~~~p~a~~~~K~~l~~~~ 223 (265)
T 3kqf_A 199 ---------------------------------------------------EIAE----KIASNGPIAVRLAKEAISNGI 223 (265)
T ss_dssp ---------------------------------------------------HHHH----HHHTSCHHHHHHHHHHHHHHT
T ss_pred ---------------------------------------------------HHHH----HHHcCCHHHHHHHHHHHHHhh
Confidence 4444 799999999999999999876
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCC
Q 012534 383 SAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 435 (461)
Q Consensus 383 ~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~ 435 (461)
..++.++++.|.+.+..++.++|++||+++|+ +| |+|+|+++
T Consensus 224 ---------~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~-ek-r~p~f~g~ 265 (265)
T 3kqf_A 224 ---------QVDLHTGLQMEKQAYEGVIHTKDRLEGLQAFK-EK-RTPMYKGE 265 (265)
T ss_dssp ---------TSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHH-TT-SCCCCCCC
T ss_pred ---------cCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-cC-CCCCCCCC
Confidence 56899999999999999999999999999999 77 89999864
No 8
>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3}
Probab=100.00 E-value=5.8e-56 Score=437.81 Aligned_cols=263 Identities=21% Similarity=0.354 Sum_probs=235.5
Q ss_pred CCccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcC
Q 012534 63 GAEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDR 142 (461)
Q Consensus 63 ~~~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~ 142 (461)
..++.|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++........
T Consensus 14 ~~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~ 91 (279)
T 3g64_A 14 PEWRHLRVEI-TDGVATVTLARPDKLNALTFEAYADLRDLLAELSRRRAVRALVLAGEG-RGFCSGGDVDEIIGATLSMD 91 (279)
T ss_dssp SCCSSEEEEE-ETTEEEEEESCGGGTTCBCHHHHHHHHHHHHHHHHTTCCSEEEEEECS-SCSBCCBCTTTTHHHHTTCC
T ss_pred CCCCeEEEEE-ECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CceecCcCHHHHhhccccch
Confidence 3467899987 799999999999999999999999999999999999999999999998 89999999999876432110
Q ss_pred CCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEec
Q 012534 143 NTPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 222 (461)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~ 222 (461)
......+....+.++.+|.++||||||+|||+|+|||++|+++||||||+++++|++
T Consensus 92 -----------------------~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~ 148 (279)
T 3g64_A 92 -----------------------TARLLDFNRMTGQVVRAVRECPFPVIAALHGVAAGAGAVLALAADFRVADPSTRFAF 148 (279)
T ss_dssp -----------------------HHHHHHHHHHHHHHHHHHHHSSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEEC
T ss_pred -----------------------hhHHHHHHHHHHHHHHHHHhCCCCEEEEEcCeeccccHHHHHhCCEEEEeCCCEEeC
Confidence 011223455556788899999999999999999999999999999999999999999
Q ss_pred cccccCCC-CCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHH
Q 012534 223 PENGIGLF-PDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIV 301 (461)
Q Consensus 223 pe~~lGl~-P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~ 301 (461)
||+++|++ |++|++++|++++|.. ++++|++||+.|+ |+||+++||||+|||++++.+.+.
T Consensus 149 pe~~~Gl~~p~~g~~~~l~r~vG~~-~A~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a~---------------- 210 (279)
T 3g64_A 149 LFTRVGLSGGDMGAAYLLPRVVGLG-HATRLLMLGDTVR-APEAERIGLISELTEEGRADEAAR---------------- 210 (279)
T ss_dssp CGGGGTCCSCCTTHHHHHHHHHCHH-HHHHHHHHCCCEE-HHHHHHHTCCSEECCTTCHHHHHH----------------
T ss_pred chhhcCCCCCchhHHHHHHHHhCHH-HHHHHHHcCCCcC-HHHHHHCCCCCEecCchHHHHHHH----------------
Confidence 99999999 9999999999999998 9999999999999 999999999999999998874322
Q ss_pred HHHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 012534 302 ALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV 381 (461)
Q Consensus 302 ~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~ 381 (461)
+||+ +|++.||.+++.+|++++..
T Consensus 211 ----------------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~~ 234 (279)
T 3g64_A 211 ----------------------------------------------------TLAR----RLADGPALAHAQTKALLTAE 234 (279)
T ss_dssp ----------------------------------------------------HHHH----HHHTSCHHHHHHHHHHHHHH
T ss_pred ----------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHhh
Confidence 4444 79999999999999999987
Q ss_pred hhhcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCC
Q 012534 382 ASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 435 (461)
Q Consensus 382 ~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~ 435 (461)
. ..+++++++.|...+..++.++|++||+++|+ +| |+|+|+++
T Consensus 235 ~---------~~~l~~~~~~e~~~~~~~~~s~d~~eg~~af~-ek-r~p~f~g~ 277 (279)
T 3g64_A 235 L---------DMPLAAAVELDASTQALLMTGEDYAEFHAAFT-EK-RPPKWQGR 277 (279)
T ss_dssp T---------TSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHH-TT-SCCCCCCC
T ss_pred h---------cCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHh-cC-CCCCCCCC
Confidence 6 56899999999999999999999999999999 78 89999975
No 9
>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} SCOP: c.14.1.0
Probab=100.00 E-value=4.1e-56 Score=436.26 Aligned_cols=262 Identities=21% Similarity=0.312 Sum_probs=228.2
Q ss_pred CccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCC
Q 012534 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRN 143 (461)
Q Consensus 64 ~~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~ 143 (461)
+++.|.+++ +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.......
T Consensus 2 ~~~~v~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~-- 77 (268)
T 3i47_A 2 SLSDLLYEI-QDKVGLLTMNRISKHNAFDNQLLTEMRIRLDSAINDTNVRVIVLKANG-KHFSAGADLTWMQSMANFT-- 77 (268)
T ss_dssp CCCSEEEEE-ETTEEEEEECCTTTTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECS-SCSBCSBCHHHHHHHHTCC--
T ss_pred CCCEEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCC-CCeeCCCChhhhhcccccc--
Confidence 467788987 799999999999999999999999999999999999999999999998 8999999999987532111
Q ss_pred CCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEecc
Q 012534 144 TPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMP 223 (461)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~p 223 (461)
......+....+.++.+|.++||||||+|||+|+|||++|+++|||||++++++|++|
T Consensus 78 ----------------------~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~p 135 (268)
T 3i47_A 78 ----------------------EEENLEDSLVLGNLMYSISQSPKPTIAMVQGAAFGGGAGLAAACDIAIASTSARFCFS 135 (268)
T ss_dssp ----------------------HHHHHHHHHHHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECC
T ss_pred ----------------------HHHHHHHHHHHHHHHHHHHhCCCCEEEEECCEEEhHhHHHHHhCCEEEEcCCCEEECc
Confidence 0111224445567888999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHH
Q 012534 224 ENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVAL 303 (461)
Q Consensus 224 e~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~ 303 (461)
|+++|++|++|++ +|++++|.. ++++|++||+.|+ |+||+++||||+|||++++.+.+.
T Consensus 136 e~~~Gl~p~~g~~-~l~~~vG~~-~A~~llltg~~i~-A~eA~~~GLV~~vv~~~~l~~~a~------------------ 194 (268)
T 3i47_A 136 EVKLGLIPAVISP-YVVRAIGER-AAKMLFMSAEVFD-ATRAYSLNLVQHCVPDDTLLEFTL------------------ 194 (268)
T ss_dssp GGGGTCCCTTTHH-HHHHHHCHH-HHHHHHHHCCEEE-HHHHHHTTSCSEEECGGGHHHHHH------------------
T ss_pred ccccCCCcccHHH-HHHHHhCHH-HHHHHHHcCCccC-HHHHHHcCCCcEeeChhHHHHHHH------------------
Confidence 9999999999988 789999998 9999999999999 999999999999999988764322
Q ss_pred HHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 012534 304 LAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVAS 383 (461)
Q Consensus 304 l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~ 383 (461)
++|+ +|+++||.+++.+|++++...
T Consensus 195 --------------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~~~- 219 (268)
T 3i47_A 195 --------------------------------------------------KYAS----QISNNAPEAVKNSKQLAQYVA- 219 (268)
T ss_dssp --------------------------------------------------HHHH----HHHTSCHHHHHHHHHHHHHHT-
T ss_pred --------------------------------------------------HHHH----HHHcCCHHHHHHHHHHHHhhh-
Confidence 3444 799999999999999999876
Q ss_pred hcCCCccccCCHHH-HHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCCCc
Q 012534 384 AHGKTDNELSKLSG-VMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPASL 437 (461)
Q Consensus 384 ~~~~~~~~~~~l~~-~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~~~ 437 (461)
..++.+ .++.|.+.+..++.++|++||+++|+ +| |+|+|++...
T Consensus 220 --------~~~l~~~~~~~e~~~~~~~~~s~d~~eg~~AF~-ek-R~p~f~~~~~ 264 (268)
T 3i47_A 220 --------NKKIDEELVRYTASLIAHKRVSDEGQEGLKAFL-NK-EIPNWNEGHH 264 (268)
T ss_dssp --------TCCCSHHHHHHHHHHHHHHHHSHHHHHHHHHHH-HT-CCCTTC----
T ss_pred --------cCChhHHHHHHHHHHHHHHhcCHHHHHHHHHHH-cC-CCCCCCCCCC
Confidence 456777 78999999999999999999999999 67 8999997543
No 10
>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium}
Probab=100.00 E-value=7.2e-56 Score=431.68 Aligned_cols=252 Identities=24% Similarity=0.362 Sum_probs=227.7
Q ss_pred CccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCC
Q 012534 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRN 143 (461)
Q Consensus 64 ~~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~ 143 (461)
+++.|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++...
T Consensus 4 ~~~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~------ 75 (255)
T 3p5m_A 4 SMNGISVEH-DGAVLRIRLDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAG-RAFCSGGDLTGGDTA------ 75 (255)
T ss_dssp CBTTEEEEE-ETTEEEEEECCGGGTTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESS-SCSBCEECC---CHH------
T ss_pred CCceEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCC-CCccCCCChhhhcch------
Confidence 345688887 799999999999999999999999999999999999999999999998 899999999986520
Q ss_pred CCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEecc
Q 012534 144 TPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMP 223 (461)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~p 223 (461)
.+....+.++.+|.++||||||+|||+|+|||++|+++|||||++++++|++|
T Consensus 76 ---------------------------~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~p 128 (255)
T 3p5m_A 76 ---------------------------GAADAANRVVRAITSLPKPVIAGVHGAAVGFGCSLALACDLVVAAPASYFQLA 128 (255)
T ss_dssp ---------------------------HHHHHHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECG
T ss_pred ---------------------------HHHHHHHHHHHHHHhCCCCEEEEeCCeehhhHHHHHHHCCEEEEcCCcEEeCc
Confidence 14444567888999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHH
Q 012534 224 ENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVAL 303 (461)
Q Consensus 224 e~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~ 303 (461)
|+++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||+|||++++.+.+.
T Consensus 129 e~~~Gl~p~~g~~~~l~r~vG~~-~A~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a~------------------ 188 (255)
T 3p5m_A 129 FTRVGLMPDGGASALLPLLIGRA-RTSRMAMTAEKIS-AATAFEWGMISHITSADEYESVLT------------------ 188 (255)
T ss_dssp GGGGTCCCCTTHHHHTHHHHCHH-HHHHHHHHCCCEE-HHHHHHTTSCSEECCTTCHHHHHH------------------
T ss_pred ccccCcCCCccHHHHHHHHhCHH-HHHHHHHcCCCcC-HHHHHHCCCCCEeeCHHHHHHHHH------------------
Confidence 99999999999999999999998 9999999999999 999999999999999998875332
Q ss_pred HHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 012534 304 LAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVAS 383 (461)
Q Consensus 304 l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~ 383 (461)
++|+ +|+++||.+++.+|++++...
T Consensus 189 --------------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~~~- 213 (255)
T 3p5m_A 189 --------------------------------------------------DVLR----SVSGGPTLAFGWTKRALAAAT- 213 (255)
T ss_dssp --------------------------------------------------HHHH----HHHTSCHHHHHHHHHHHHHHH-
T ss_pred --------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHHhh-
Confidence 4444 799999999999999999877
Q ss_pred hcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCC
Q 012534 384 AHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 435 (461)
Q Consensus 384 ~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~ 435 (461)
..+++++++.|.+.+..++.++|++||+++|+ +| |+|+|+++
T Consensus 214 --------~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~-ek-r~p~f~g~ 255 (255)
T 3p5m_A 214 --------LAELEPVQAIEAEGQLALVETADFREGARAFR-ER-RTPNFRGH 255 (255)
T ss_dssp --------CTTHHHHHHHHHHHHHHHTTSHHHHHHHHHHH-TT-SCCCCCCC
T ss_pred --------cCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-cC-CCCCCCCC
Confidence 56899999999999999999999999999999 77 89999863
No 11
>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A*
Probab=100.00 E-value=1.8e-56 Score=440.77 Aligned_cols=257 Identities=24% Similarity=0.326 Sum_probs=227.7
Q ss_pred CCccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcC
Q 012534 63 GAEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDR 142 (461)
Q Consensus 63 ~~~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~ 142 (461)
|+++.|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++......
T Consensus 22 m~~~~v~~~~-~~~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~-- 97 (278)
T 3h81_A 22 MTYETILVER-DQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSA-KAFAAGADIKEMADLTFA-- 97 (278)
T ss_dssp -CCSSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCS-SEEECCBCSHHHHTCCHH--
T ss_pred CCCCeEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCC-CCeecCcCHHHHhccChh--
Confidence 4567899987 789999999999999999999999999999999999999999999976 899999999998642100
Q ss_pred CCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEec
Q 012534 143 NTPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 222 (461)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~ 222 (461)
..+....+..+.+|.++||||||+|||+|+|||++|+++|||||++++++|++
T Consensus 98 ---------------------------~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~ 150 (278)
T 3h81_A 98 ---------------------------DAFTADFFATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQ 150 (278)
T ss_dssp ---------------------------HHHHHTTTGGGHHHHTCCSCEEEEECBEEETHHHHHHHHSSEEEEETTCEEEC
T ss_pred ---------------------------hHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEEcCCCEEEC
Confidence 00112222236678999999999999999999999999999999999999999
Q ss_pred cccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHH
Q 012534 223 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 302 (461)
Q Consensus 223 pe~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~ 302 (461)
||+++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||+|||++++.+.+.
T Consensus 151 pe~~lGl~p~~g~~~~L~r~vG~~-~A~~l~ltG~~~~-A~eA~~~GLv~~vv~~~~l~~~a~----------------- 211 (278)
T 3h81_A 151 PEIKLGVLPGMGGSQRLTRAIGKA-KAMDLILTGRTMD-AAEAERSGLVSRVVPADDLLTEAR----------------- 211 (278)
T ss_dssp GGGGGTCCCCSSHHHHHHHHHCHH-HHHHHHHHCCCEE-HHHHHHHTSCSEEECGGGHHHHHH-----------------
T ss_pred chhhcCcCCCccHHHHHHHHhCHH-HHHHHHHhCCCcC-HHHHHHCCCccEEeChhHHHHHHH-----------------
Confidence 999999999999999999999997 9999999999999 999999999999999888764222
Q ss_pred HHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 012534 303 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 382 (461)
Q Consensus 303 ~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~ 382 (461)
+||+ +|+++||.+++.+|++++...
T Consensus 212 ---------------------------------------------------~~a~----~la~~~p~a~~~~K~~l~~~~ 236 (278)
T 3h81_A 212 ---------------------------------------------------ATAT----TISQMSASAARMAKEAVNRAF 236 (278)
T ss_dssp ---------------------------------------------------HHHH----HHHTSCHHHHHHHHHHHHHTT
T ss_pred ---------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHhhh
Confidence 3444 799999999999999999876
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCC
Q 012534 383 SAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 435 (461)
Q Consensus 383 ~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~ 435 (461)
..++.++++.|.+.+..++.++|++||+++|+ +| |+|+|+++
T Consensus 237 ---------~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~-ek-R~P~f~g~ 278 (278)
T 3h81_A 237 ---------ESSLSEGLLYERRLFHSAFATEDQSEGMAAFI-EK-RAPQFTHR 278 (278)
T ss_dssp ---------TSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHH-TT-SCCCCCCC
T ss_pred ---------cCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-cC-CCCCCCCC
Confidence 56899999999999999999999999999999 78 89999874
No 12
>3gow_A PAAG, probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus HB8} PDB: 3hrx_A
Probab=100.00 E-value=5.8e-56 Score=432.11 Aligned_cols=253 Identities=26% Similarity=0.379 Sum_probs=227.3
Q ss_pred eEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCCC
Q 012534 68 VKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLV 147 (461)
Q Consensus 68 i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~ 147 (461)
|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++... . .
T Consensus 2 v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~---~--~--- 71 (254)
T 3gow_A 2 VLKER-QDGVLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAG-RAFSAGQDLTEFGDR---K--P--- 71 (254)
T ss_dssp EEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEST-TCSBCCBCGGGTTTS---C--C---
T ss_pred eEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCC-CcccCCCChHHHhhc---c--h---
Confidence 56666 799999999999999999999999999999999999999999999998 899999999987531 0 0
Q ss_pred CCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEecccccc
Q 012534 148 PKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGI 227 (461)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~l 227 (461)
....++...+.++.+|.++||||||+|||+|+|||++|+++|||||++++++|++||+++
T Consensus 72 --------------------~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~ 131 (254)
T 3gow_A 72 --------------------DYEAHLRRYNRVVEALSGLEKPLVVAVNGVAAGAGMSLALWGDLRLAAVGASFTTAFVRI 131 (254)
T ss_dssp --------------------CHHHHTHHHHHHHHHHHTCSSCEEEEECSEEETHHHHHHTTCSEEEEETTCEEECCGGGG
T ss_pred --------------------hHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEEcCCCEEeCccccc
Confidence 011234445678889999999999999999999999999999999999999999999999
Q ss_pred CCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHHHHhh
Q 012534 228 GLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKY 307 (461)
Q Consensus 228 Gl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~l~~~ 307 (461)
|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||++||++++.+.+.
T Consensus 132 Gl~p~~g~~~~l~r~vG~~-~A~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a~---------------------- 187 (254)
T 3gow_A 132 GLVPDSGLSFLLPRLVGLA-KAQELLLLSPRLS-AEEALALGLVHRVVPAEKLMEEAL---------------------- 187 (254)
T ss_dssp TCCCCTTHHHHHHHHHCHH-HHHHHHHHCCCEE-HHHHHHHTSCSEEECGGGHHHHHH----------------------
T ss_pred CCCCCccHHHHHHHHhCHH-HHHHHHHcCCccC-HHHHHHcCCCCEecCHHHHHHHHH----------------------
Confidence 9999999999999999997 9999999999999 999999999999999888764222
Q ss_pred cCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhcCC
Q 012534 308 SSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGK 387 (461)
Q Consensus 308 ~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~ 387 (461)
++|+ +|+++||.+++.+|++++...
T Consensus 188 ----------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~~~----- 212 (254)
T 3gow_A 188 ----------------------------------------------SLAK----ELAQGPTRAYALTKKLLLETY----- 212 (254)
T ss_dssp ----------------------------------------------HHHH----HHHTSCHHHHHHHHHHHHHGG-----
T ss_pred ----------------------------------------------HHHH----HHHcCCHHHHHHHHHHHHHhh-----
Confidence 3443 799999999999999999876
Q ss_pred CccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCC
Q 012534 388 TDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 435 (461)
Q Consensus 388 ~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~ 435 (461)
..+++++++.|...+..++.++|++||+++|+ +| |+|+|+++
T Consensus 213 ----~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~-ek-r~p~f~g~ 254 (254)
T 3gow_A 213 ----RLSLTEALALEAVLQGQAGQTQDHEEGVRAFR-EK-RPPRFQGR 254 (254)
T ss_dssp ----GSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHH-TT-SCCCCCCC
T ss_pred ----hCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-cC-CCCCCCCC
Confidence 56899999999999999999999999999999 67 89999864
No 13
>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis}
Probab=100.00 E-value=4.2e-56 Score=434.72 Aligned_cols=257 Identities=23% Similarity=0.293 Sum_probs=228.0
Q ss_pred ccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCC
Q 012534 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNT 144 (461)
Q Consensus 65 ~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~ 144 (461)
++.|.++. +++|++||||||++ |+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.....
T Consensus 5 ~~~v~~~~-~~~v~~itlnrp~~-Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~----- 76 (261)
T 3pea_A 5 LKFLSVRV-EDHIAVATLNHAPA-NAMSSQVMHDVTELIDQVEKDDNIRVVVIHGEG-RFFSAGADIKEFTSVTE----- 76 (261)
T ss_dssp CSSEEEEE-ETTEEEEEECCTTT-TCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEST-TCSBCCBCGGGSSTTCC-----
T ss_pred ccceEEEE-ECCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CceeCCcCHHHHhhcCc-----
Confidence 46688887 79999999999999 999999999999999999999999999999998 89999999998753110
Q ss_pred CCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEeccc
Q 012534 145 PLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPE 224 (461)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe 224 (461)
......+....+.++.+|.++||||||+|||+|+|||++|+++|||||++++++|++||
T Consensus 77 ---------------------~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe 135 (261)
T 3pea_A 77 ---------------------AKQATELAQLGQVTFERVEKCSKPVIAAIHGAALGGGLEFAMSCHMRFATESAKLGLPE 135 (261)
T ss_dssp ---------------------HHHHHHHHHHHHHHHHHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCG
T ss_pred ---------------------hhHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcc
Confidence 00111233334567888999999999999999999999999999999999999999999
Q ss_pred cccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHHH
Q 012534 225 NGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALL 304 (461)
Q Consensus 225 ~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~l 304 (461)
+++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||++||++++.+.+.
T Consensus 136 ~~~Gl~p~~g~~~~L~r~vG~~-~a~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a~------------------- 194 (261)
T 3pea_A 136 LTLGLIPGFAGTQRLPRYVGKA-KACEMMLTSTPIT-GAEALKWGLVNGVFAEETFLDDTL------------------- 194 (261)
T ss_dssp GGGTCCCCSSHHHHHHHHHCHH-HHHHHHHHCCCEE-HHHHHHHTSSSEEECGGGHHHHHH-------------------
T ss_pred cccCcCCCccHHHHHHHHhCHH-HHHHHHHcCCCCC-HHHHHHCCCccEecCHHHHHHHHH-------------------
Confidence 9999999999999999999998 9999999999999 999999999999999988764322
Q ss_pred HhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhh
Q 012534 305 AKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASA 384 (461)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~~ 384 (461)
+||+ +|+++||.+++.+|++++...
T Consensus 195 -------------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~~~-- 219 (261)
T 3pea_A 195 -------------------------------------------------KVAK----QIAGKSPATARAVLELLQTTK-- 219 (261)
T ss_dssp -------------------------------------------------HHHH----HHHTSCHHHHHHHHHHHGGGC--
T ss_pred -------------------------------------------------HHHH----HHHcCCHHHHHHHHHHHHHhh--
Confidence 4444 799999999999999999876
Q ss_pred cCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCC
Q 012534 385 HGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 435 (461)
Q Consensus 385 ~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~ 435 (461)
..++.++++.|...+..++.++|++||+++|+ +| |+|+|+++
T Consensus 220 -------~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~-ek-r~P~f~g~ 261 (261)
T 3pea_A 220 -------SSHYYEGVQREAQIFGEVFTSEDGREGVAAFL-EK-RKPSFSGR 261 (261)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHH-TT-SCCCCCC-
T ss_pred -------cCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-cC-CCCCCCCC
Confidence 45799999999999999999999999999999 77 89999863
No 14
>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis}
Probab=100.00 E-value=2.1e-56 Score=437.28 Aligned_cols=257 Identities=23% Similarity=0.317 Sum_probs=228.0
Q ss_pred CCccceEEEEecCc-EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhc
Q 012534 63 GAEEFVKGNVHPNG-VAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKD 141 (461)
Q Consensus 63 ~~~~~i~~~~~~~~-V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~ 141 (461)
|+++.|.++. +++ |++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++......
T Consensus 6 m~~~~i~~~~-~~~gv~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~- 82 (263)
T 3moy_A 6 TTYTTIATSR-PVAGVGLIRLDRPDALNALNQTLEAEVLDAARDFDADLEIGAIVVTGSE-RAFAAGADIAEMVTLTPH- 82 (263)
T ss_dssp CCCSSEEEEC-CSTTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCS-SEEEESBCHHHHTTCCHH-
T ss_pred CCCCeEEEEE-eCCeEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCC-CCeeCCcChHHHhccCch-
Confidence 3467788887 555 999999999999999999999999999999999999999999976 899999999987531100
Q ss_pred CCCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEe
Q 012534 142 RNTPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLA 221 (461)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~ 221 (461)
. .+......++.+|.++||||||+|||+|+|||++|+++|||||++++++|+
T Consensus 83 --------------------------~--~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~ 134 (263)
T 3moy_A 83 --------------------------Q--ARERNLLSGWDSLTQVRKPIVAAVAGYALGGGCELAMLCDLVIAADTARFG 134 (263)
T ss_dssp --------------------------H--HHHTTTTHHHHHHTTCCSCEEEEECBEEETHHHHHHHHSSEEEEETTCEEE
T ss_pred --------------------------h--HHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHHCCEEEecCCCEEe
Confidence 0 012223456778999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHH
Q 012534 222 MPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIV 301 (461)
Q Consensus 222 ~pe~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~ 301 (461)
+||+++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||+|||++++.+.+.
T Consensus 135 ~pe~~~Gl~p~~g~~~~l~~~vG~~-~A~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a~---------------- 196 (263)
T 3moy_A 135 QPEITLGILPGLGGTQRLTRAVGKA-KAMDLCLTGRSLT-AEEAERVGLVSRIVPAADLLDEAL---------------- 196 (263)
T ss_dssp CGGGGGTCCCSSSTTTHHHHHHCHH-HHHHHHHHCCEEE-HHHHHHTTSCSEEECGGGHHHHHH----------------
T ss_pred CcccccCCCCchhHHHHHHHHhCHH-HHHHHHHcCCCCC-HHHHHHCCCccEecCchHHHHHHH----------------
Confidence 9999999999999999999999998 9999999999999 999999999999999888764222
Q ss_pred HHHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 012534 302 ALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV 381 (461)
Q Consensus 302 ~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~ 381 (461)
++|+ +|+.+||.+++.+|++++..
T Consensus 197 ----------------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~~ 220 (263)
T 3moy_A 197 ----------------------------------------------------AVAQ----RIARMSRPAGRAVKDAINEA 220 (263)
T ss_dssp ----------------------------------------------------HHHH----HHHHSCHHHHHHHHHHHHHT
T ss_pred ----------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHHh
Confidence 4444 79999999999999999987
Q ss_pred hhhcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCC
Q 012534 382 ASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 435 (461)
Q Consensus 382 ~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~ 435 (461)
. ..+++++++.|.+.+..++.++|++||+++|+ +| |+|+|+++
T Consensus 221 ~---------~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~-ek-R~p~f~g~ 263 (263)
T 3moy_A 221 F---------ERPLSAGMRYERDAFYAMFDTHDQTEGMTAFL-EK-RTPEFTDR 263 (263)
T ss_dssp T---------TSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHH-TT-SCCCCCCC
T ss_pred h---------cCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-hC-CCCCCCCC
Confidence 6 56899999999999999999999999999999 78 89999874
No 15
>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus}
Probab=100.00 E-value=2.3e-55 Score=435.69 Aligned_cols=264 Identities=21% Similarity=0.296 Sum_probs=226.3
Q ss_pred cceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCC
Q 012534 66 EFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTP 145 (461)
Q Consensus 66 ~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~ 145 (461)
..|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++........
T Consensus 24 ~~v~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G-~~F~aG~Dl~~~~~~~~~~~--- 98 (290)
T 3sll_A 24 FVLVDRP-RPEIALVTLNRPERMNAMAFDVMLPFKQMLVDISHDNDVRAVVITGAG-KGFCSGADQKSAGPIPHIGG--- 98 (290)
T ss_dssp CEEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHTCTTCCEEEEEEST-TCSBCC------CCCSSCTT---
T ss_pred eEEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHcCCCeeEEEEECCC-CCeeCCcChHHHhccccccc---
Confidence 4577776 799999999999999999999999999999999999999999999998 89999999998753210000
Q ss_pred CCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEecccc
Q 012534 146 LVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPEN 225 (461)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe~ 225 (461)
. ........+....+.++.+|.++||||||+|||+|+|||++|+++|||||++++++|++||+
T Consensus 99 -----------~------~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~ 161 (290)
T 3sll_A 99 -----------L------TQPTIALRSMELLDEVILTLRRMHQPVIAAINGAAIGGGLCLALACDVRVASQDAYFRAAGI 161 (290)
T ss_dssp -----------C------CHHHHHHHHHHHHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECTTT
T ss_pred -----------c------cchhHHHHHHHHHHHHHHHHHhCCCCEEEEECCeehHHHHHHHHHCCEEEEeCCCEEECchh
Confidence 0 00112234556667788999999999999999999999999999999999999999999999
Q ss_pred ccCCCCC-chHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHHH
Q 012534 226 GIGLFPD-VGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALL 304 (461)
Q Consensus 226 ~lGl~P~-~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~l 304 (461)
++|++|+ +|++++|++++|.. ++++|++||+.|+ |+||+++||||+|||++++.+.+.
T Consensus 162 ~~Gl~p~~~g~~~~L~r~vG~~-~A~~llltG~~i~-A~eA~~~GLV~~vv~~~~l~~~a~------------------- 220 (290)
T 3sll_A 162 NNGLTASELGLSYLLPRAIGTS-RASDIMLTGRDVD-ADEAERIGLVSRKVASESLLEECY------------------- 220 (290)
T ss_dssp TTTSCSCCTTHHHHHHHHHCHH-HHHHHHHHCCCEE-HHHHHHHTSSSEEECGGGHHHHHH-------------------
T ss_pred ccCcCCCcccHHHHHHHHhCHH-HHHHHHHcCCCCC-HHHHHHCCCccEEeChhHHHHHHH-------------------
Confidence 9999999 99999999999997 9999999999999 999999999999999988764222
Q ss_pred HhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhh
Q 012534 305 AKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASA 384 (461)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~~ 384 (461)
++|+ +|+++||.+++.+|++++...
T Consensus 221 -------------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~~~-- 245 (290)
T 3sll_A 221 -------------------------------------------------AIGE----RIAGFSRPGIELTKRTIWSGL-- 245 (290)
T ss_dssp -------------------------------------------------HHHH----HHHHSCHHHHHHHHHHHHHHH--
T ss_pred -------------------------------------------------HHHH----HHHcCCHHHHHHHHHHHHhhc--
Confidence 3444 799999999999999999887
Q ss_pred cCCCcccc-CCHHHHHHHHHHHHHhhc-CCCcHHHHHHhhhcCCCCCCCCCCCC
Q 012534 385 HGKTDNEL-SKLSGVMKYEYRVALRSS-LRSDFAEGVRAVLVDKDQNPKWNPAS 436 (461)
Q Consensus 385 ~~~~~~~~-~~l~~~l~~E~~~~~~~~-~s~d~~egv~afl~~K~r~P~w~~~~ 436 (461)
. .+++++++.|...+..++ .++|++||+++|+ +| |+|+|++++
T Consensus 246 -------~~~~l~~~l~~e~~~~~~~~~~s~d~~eg~~AFl-ek-R~P~f~g~~ 290 (290)
T 3sll_A 246 -------DAASLESHMHQEGLGQLYVRLLTDNFEEATAARK-EK-RPAEFRDKR 290 (290)
T ss_dssp -------TCSCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH-TT-SCCCCCSCC
T ss_pred -------ccCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH-cC-CCCCCCCCC
Confidence 4 689999999999999999 9999999999999 77 899999864
No 16
>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A
Probab=100.00 E-value=8.6e-55 Score=428.63 Aligned_cols=269 Identities=18% Similarity=0.263 Sum_probs=229.9
Q ss_pred ccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCC
Q 012534 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNT 144 (461)
Q Consensus 65 ~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~ 144 (461)
|+.|.++.++++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++..........
T Consensus 2 ~~~v~~~~~~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~FcaG~Dl~~~~~~~~~~~~~ 80 (275)
T 1dci_A 2 YESIQVTSAQKHVLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAG-KMFTSGIDLMDMASDILQPPGD 80 (275)
T ss_dssp CSSEEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEEST-TCSBCCBCHHHHHHHHTSCCCS
T ss_pred CceEEEEEcCCCEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CCccCCcChHHHhhcccccccc
Confidence 456888875678999999999999999999999999999999999999999999998 8999999999986532110000
Q ss_pred CCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEeccc
Q 012534 145 PLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPE 224 (461)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe 224 (461)
+ ..........+....+.++..|.++||||||+|||+|+|||++|+++|||||++++++|++||
T Consensus 81 -----------~-----~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe 144 (275)
T 1dci_A 81 -----------D-----VARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKE 144 (275)
T ss_dssp -----------S-----HHHHHHHHHHHHHHHHHHHHHHHHSSSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEECCG
T ss_pred -----------h-----hhhhhHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeeHHHHHHHHhCCEEEEeCCCEEeCcc
Confidence 0 000011122234445667888999999999999999999999999999999999999999999
Q ss_pred cccCCCCCchHHHHHhcCCCc-hHHHHHHhhcCCCCCcHHHHHHcCccceecCC-CChHHHHHHHHhcccCCChHHHHHH
Q 012534 225 NGIGLFPDVGFSYIAAKGPGG-GSVGAYLGMTGKRISTPSDALFAGLGTDYVPS-GNLGSLKEALLAVTFSEDPHQDIVA 302 (461)
Q Consensus 225 ~~lGl~P~~G~~~~L~rlvG~-~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~-~~l~~~~~ala~~~~~~~~~~~~~~ 302 (461)
+++|++|++|++++|++++|. . ++++|++||+.|+ |+||+++||||+|||+ +++.+.+
T Consensus 145 ~~~Gl~p~~g~~~~l~r~vG~~~-~A~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~~l~~~a------------------ 204 (275)
T 1dci_A 145 VDVGLAADVGTLQRLPKVIGNRS-LVNELTFTARKMM-ADEALDSGLVSRVFPDKDVMLNAA------------------ 204 (275)
T ss_dssp GGGTSCCCSSHHHHGGGTCSCHH-HHHHHHHHCCEEE-HHHHHHHTSSSEEESSHHHHHHHH------------------
T ss_pred cccCCCCCccHHHHHHHHhCcHH-HHHHHHHcCCCCC-HHHHHHcCCcceecCChHHHHHHH------------------
Confidence 999999999999999999999 8 9999999999999 9999999999999997 6655322
Q ss_pred HHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 012534 303 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 382 (461)
Q Consensus 303 ~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~ 382 (461)
.++|+ +|+++||.+++.+|++++...
T Consensus 205 --------------------------------------------------~~~a~----~la~~~p~a~~~~K~~l~~~~ 230 (275)
T 1dci_A 205 --------------------------------------------------FALAA----DISSKSPVAVQGSKINLIYSR 230 (275)
T ss_dssp --------------------------------------------------HHHHH----HHHHSCHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHHHHhc
Confidence 14444 799999999999999999876
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCC--CCCCCCC
Q 012534 383 SAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKD--QNPKWNP 434 (461)
Q Consensus 383 ~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~--r~P~w~~ 434 (461)
..++.++++.|...+..++.++|++||+++|+ +|+ |+|+|++
T Consensus 231 ---------~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~-ek~~~r~p~f~~ 274 (275)
T 1dci_A 231 ---------DHSVDESLDYMATWNMSMLQTQDIIKSVQAAM-EKKDSKSITFSK 274 (275)
T ss_dssp ---------HSCHHHHHHHHHHHHHHHTSSHHHHHHHHHHH-TTCCGGGCCCCC
T ss_pred ---------cCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHH-hcCCCCCCCCCC
Confidence 46899999999999999999999999999999 665 7999985
No 17
>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris}
Probab=100.00 E-value=2.9e-56 Score=438.64 Aligned_cols=258 Identities=20% Similarity=0.258 Sum_probs=227.4
Q ss_pred CCccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcC
Q 012534 63 GAEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDR 142 (461)
Q Consensus 63 ~~~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~ 142 (461)
|+++.|.++. +++|++||||||+++|+||.+|+.+|.++++.+ |+++|+|||||.| ++||+|+|++++....
T Consensus 13 m~~~~v~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~--d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~---- 84 (275)
T 3hin_A 13 ADPSTLVVDT-VGPVLTIGLNRPKKRNALNDGLMAALKDCLTDI--PDQIRAVVIHGIG-DHFSAGLDLSELRERD---- 84 (275)
T ss_dssp CCGGGEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHTSSC--CTTCCEEEEEESS-SCSBCCBCGGGCCCCC----
T ss_pred CCCCeEEEEE-ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHh--CcCceEEEEECCC-CCccCCCCHHHHhccC----
Confidence 5577899987 799999999999999999999999999999999 5789999999998 8999999999874210
Q ss_pred CCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEec
Q 012534 143 NTPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 222 (461)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~ 222 (461)
......+....+.++.+|.++||||||+|||+|+|||++|+++|||||++++++|++
T Consensus 85 -----------------------~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~ 141 (275)
T 3hin_A 85 -----------------------ATEGLVHSQTWHRVFDKIQYCRVPVIAALKGAVIGGGLELACAAHIRVAEASAYYAL 141 (275)
T ss_dssp -----------------------HHHHHHHHHHHHHHHHHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEEC
T ss_pred -----------------------hhhHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEEC
Confidence 001122445556788899999999999999999999999999999999999999999
Q ss_pred cccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHH
Q 012534 223 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 302 (461)
Q Consensus 223 pe~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~ 302 (461)
||+++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||+|||++++.+.+.
T Consensus 142 pe~~~Gl~p~~g~~~~L~r~vG~~-~A~~l~ltG~~i~-A~eA~~~GLv~~vv~~~~l~~~a~----------------- 202 (275)
T 3hin_A 142 PEGSRGIFVGGGGSVRLPRLIGVA-RMADMMLTGRVYS-AAEGVVHGFSQYLIENGSAYDKAL----------------- 202 (275)
T ss_dssp GGGGGTCCCCSSHHHHHHHHHCHH-HHHHHHHHCCCEE-HHHHHHHTSCSEEESSSCHHHHHH-----------------
T ss_pred chhccCCCCCccHHHHHHHHhCHH-HHHHHHHcCCCCC-HHHHHHCCCCCEEeChhHHHHHHH-----------------
Confidence 999999999999999999999998 9999999999999 999999999999999999874322
Q ss_pred HHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 012534 303 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 382 (461)
Q Consensus 303 ~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~ 382 (461)
++|+ +|+++||.+++.+|++++...
T Consensus 203 ---------------------------------------------------~~a~----~ia~~~p~a~~~~K~~l~~~~ 227 (275)
T 3hin_A 203 ---------------------------------------------------ELGN----RVAQNAPLTNFAVLQALPMIA 227 (275)
T ss_dssp ---------------------------------------------------HHHH----HHTTSCHHHHHHHHTHHHHHH
T ss_pred ---------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHHhh
Confidence 3444 799999999999999999876
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCCC
Q 012534 383 SAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPAS 436 (461)
Q Consensus 383 ~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~~ 436 (461)
..+++++++.|...+..++.++|++||+++|+ +| |+|+|++..
T Consensus 228 ---------~~~~~~~l~~e~~~~~~~~~s~d~~eg~~AF~-ek-R~p~f~~~~ 270 (275)
T 3hin_A 228 ---------EANPQTGLLMESLMATVAQSDQEAKTRIRAFL-DH-KTAKVREGH 270 (275)
T ss_dssp ---------HSCHHHHHHHHHHHHHHHHHSHHHHHHHHHHH-HH-HHHHC----
T ss_pred ---------cCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-cC-CCCCCCCCC
Confidence 56899999999999999999999999999999 67 899998753
No 18
>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii}
Probab=100.00 E-value=1.4e-55 Score=432.11 Aligned_cols=256 Identities=23% Similarity=0.343 Sum_probs=216.9
Q ss_pred ccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCC
Q 012534 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNT 144 (461)
Q Consensus 65 ~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~ 144 (461)
++.|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++..........
T Consensus 4 ~~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~~~ 81 (266)
T 3fdu_A 4 HPHLNANL-EGGVLTLAINRPEAKNALYGELYLWIAKALDEADQNKDVRVVVLRGAE-HDFTAGNDMKDFMGFVQNPNAG 81 (266)
T ss_dssp CTTEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESS-SCSBCCBCHHHHHHHHHSCCCS
T ss_pred CCeEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCC-CCeECCcCHHHHhhhccccchh
Confidence 46688887 799999999999999999999999999999999999999999999998 8999999999987432211110
Q ss_pred CCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEeccc
Q 012534 145 PLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPE 224 (461)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe 224 (461)
. ......+.++.+|.++||||||+|||+|+|||++|+++|||||++++++|++||
T Consensus 82 ~-------------------------~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe 136 (266)
T 3fdu_A 82 P-------------------------AGQVPPFVLLKSAARLSKPLIIAVKGVAIGIGVTILLQADLVFADNTALFQIPF 136 (266)
T ss_dssp C-------------------------GGGSHHHHHHHHHHHCCSCEEEEECSEEETHHHHGGGGCSEEEECTTCEEECCT
T ss_pred h-------------------------HHHHHHHHHHHHHHhCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCCEEECch
Confidence 0 012233466778999999999999999999999999999999999999999999
Q ss_pred cccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHHH
Q 012534 225 NGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALL 304 (461)
Q Consensus 225 ~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~l 304 (461)
+++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||+||| ++.+
T Consensus 137 ~~~Gl~p~~g~~~~l~r~vG~~-~A~~l~ltg~~i~-A~eA~~~GLv~~vv~--~l~~---------------------- 190 (266)
T 3fdu_A 137 VSLGLSPEGGASQLLVKQAGYH-KAAELLFTAKKFN-AETALQAGLVNEIVE--DAYA---------------------- 190 (266)
T ss_dssp TTTTCCCCTTHHHHHHHHHCHH-HHHHHHHHCCEEC-HHHHHHTTSCSEECS--CHHH----------------------
T ss_pred hhhCCCCcchHHHHHHHHhCHH-HHHHHHHhCCCcC-HHHHHHCCCHHHHHH--HHHH----------------------
Confidence 9999999999999999999998 9999999999999 999999999999998 6653
Q ss_pred HhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhh
Q 012534 305 AKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASA 384 (461)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~~ 384 (461)
.|.+++++|+++||.+++.+|++++...
T Consensus 191 --------------------------------------------------~a~~~a~~la~~~~~a~~~~K~~l~~~~-- 218 (266)
T 3fdu_A 191 --------------------------------------------------TAQATAQHLTALPLASLKQTKALMKHDL-- 218 (266)
T ss_dssp --------------------------------------------------HHHHHHHHHHTSCHHHHHHHHHHHTTTH--
T ss_pred --------------------------------------------------HHHHHHHHHHhCCHHHHHHHHHHHHhhh--
Confidence 2233334899999999999999998754
Q ss_pred cCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCC
Q 012534 385 HGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 435 (461)
Q Consensus 385 ~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~ 435 (461)
.+++++++.|...+..++.++|++||+++|+ +| |+|+|++.
T Consensus 219 --------~~l~~~l~~e~~~~~~~~~s~d~~eg~~aF~-ek-R~p~~~~~ 259 (266)
T 3fdu_A 219 --------DQIIECIDHEAEIFMQRVQSPEMLEAVQAFM-QK-RQPDFSQE 259 (266)
T ss_dssp --------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHC------------
T ss_pred --------ccHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-cC-CCCCCCCC
Confidence 3689999999999999999999999999999 77 89999875
No 19
>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus}
Probab=100.00 E-value=6e-56 Score=434.61 Aligned_cols=257 Identities=21% Similarity=0.228 Sum_probs=226.2
Q ss_pred ccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCC
Q 012534 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNT 144 (461)
Q Consensus 65 ~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~ 144 (461)
++.|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| +.||+|+|++++.........
T Consensus 8 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~~- 84 (265)
T 3swx_A 8 YETLRIRR-DGYVLVIGLNRPAKRNAFDKTMLEELALALGEYETDTDLRAAVLYGEG-PLFTAGLDLASVAAEIQGGAS- 84 (265)
T ss_dssp CSSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEST-TCSBCCBCHHHHHHHHC--CC-
T ss_pred CceEEEEE-ECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCC-CCcccCcChHHHhhcccchhH-
Confidence 67788887 799999999999999999999999999999999999999999999998 679999999998764322110
Q ss_pred CCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHH-hhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEecc
Q 012534 145 PLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKI-SEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMP 223 (461)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~p 223 (461)
... ......+..+ .++||||||+|||+|+|||++|+++|||||++++++|++|
T Consensus 85 ~~~--------------------------~~~~~~~~~l~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~p 138 (265)
T 3swx_A 85 LTP--------------------------EGGINPWQVDGRQLSKPLLVAVHGKVLTLGIELALAADIVIADETATFAQL 138 (265)
T ss_dssp CCC--------------------------TTCCCTTCCSSCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECG
T ss_pred HHH--------------------------HHHHHHHHHHHHhCCCCEEEEEcCeeehHHHHHHHHCCEEEEcCCCEEECc
Confidence 000 0001223456 8999999999999999999999999999999999999999
Q ss_pred ccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHH
Q 012534 224 ENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVAL 303 (461)
Q Consensus 224 e~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~ 303 (461)
|+++|++|++|++++|++++|.. ++++|++||+.++ |+||+++||||+|||++++.+.+.
T Consensus 139 e~~~Gl~p~~g~~~~l~r~vG~~-~A~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a~------------------ 198 (265)
T 3swx_A 139 EVNRGIYPFGGATIRFPRTAGWG-NAMRWMLTADTFD-AVEAHRIGIVQEIVPVGEHVDTAI------------------ 198 (265)
T ss_dssp GGGGTSCCCSSHHHHHHHHHCHH-HHHHHHTTCCCEE-HHHHHHTTSCSEEESTTCHHHHHH------------------
T ss_pred ccccccCCCccHHHHHHHHhhHH-HHHHHHHcCCcCC-HHHHHHcCCCCEecChhHHHHHHH------------------
Confidence 99999999999999999999998 9999999999999 999999999999999998865322
Q ss_pred HHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 012534 304 LAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVAS 383 (461)
Q Consensus 304 l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~ 383 (461)
++|+ +|+++||.+++.+|++++...
T Consensus 199 --------------------------------------------------~~a~----~la~~~p~a~~~~K~~l~~~~- 223 (265)
T 3swx_A 199 --------------------------------------------------AIAQ----TIARQAPLGVQATLRNARLAV- 223 (265)
T ss_dssp --------------------------------------------------HHHH----HHHHSCHHHHHHHHHHHHHHH-
T ss_pred --------------------------------------------------HHHH----HHHcCCHHHHHHHHHHHHHhh-
Confidence 3444 799999999999999999876
Q ss_pred hcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCC
Q 012534 384 AHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 435 (461)
Q Consensus 384 ~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~ 435 (461)
..+++++++.|...+..++.++|++||+++|+ +| |+|+|+++
T Consensus 224 --------~~~~~~~~~~e~~~~~~~~~s~d~~eg~~af~-ek-r~p~f~g~ 265 (265)
T 3swx_A 224 --------REGDAAAEEQLVPTVRELFTSEDATLGVQAFL-SR-TTAEFVGR 265 (265)
T ss_dssp --------HHCHHHHHHHHHHHHHHHHTSHHHHHHHHHHH-TT-CCCCCCCC
T ss_pred --------cCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHh-cC-CCCCCCCC
Confidence 45899999999999999999999999999999 67 89999874
No 20
>4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum}
Probab=100.00 E-value=2.1e-55 Score=433.67 Aligned_cols=258 Identities=22% Similarity=0.312 Sum_probs=215.2
Q ss_pred CccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCC
Q 012534 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRN 143 (461)
Q Consensus 64 ~~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~ 143 (461)
..+.|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++........
T Consensus 18 ~~~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~- 94 (278)
T 4f47_A 18 SGPDALVEQ-RGHTLIVTMNRPSRRNALSGEMMQIMVEAWDRVDNDPDIRCCILTGAG-GYFCAGMDLKAATKKPPGDS- 94 (278)
T ss_dssp -CCSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEEST-TCCC-----------------
T ss_pred CCCceEEEE-ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCC-CcccCCcChHhhhccchhhh-
Confidence 346688887 799999999999999999999999999999999999999999999998 89999999999865321100
Q ss_pred CCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHh---hCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceE
Q 012534 144 TPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKIS---EYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLL 220 (461)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f 220 (461)
. ........++..+. ++||||||+|||+|+|||++|+++|||||++++++|
T Consensus 95 -------------------------~-~~~~~~~~~~~~l~~~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f 148 (278)
T 4f47_A 95 -------------------------F-KDGSYDPSRIDALLKGRRLKKPLIAAVEGPAIAGGTEILQGTDIRVAAESAKF 148 (278)
T ss_dssp --------------------------------CTTCBTTTTBSCCCSSCEEEEECSEEETHHHHHHTTCSEEEEETTCEE
T ss_pred -------------------------H-HHHHHHHHHHHHHHHhcCCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCCEE
Confidence 0 00001112334455 999999999999999999999999999999999999
Q ss_pred eccccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHH
Q 012534 221 AMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDI 300 (461)
Q Consensus 221 ~~pe~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~ 300 (461)
++||+++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||+|||++++.+.+.
T Consensus 149 ~~pe~~~Gl~p~~g~~~~L~r~vG~~-~a~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a~--------------- 211 (278)
T 4f47_A 149 GISEAKWSLYPMGGSAVRLVRQIPYT-VACDLLLTGRHIT-AAEAKEMGLVGHVVPDGQALTKAL--------------- 211 (278)
T ss_dssp ECCGGGGTCCCTTSHHHHHHHHSCHH-HHHHHHHHCCCEE-HHHHHHTTSCSEEECTTCHHHHHH---------------
T ss_pred ECcccccCCCCCccHHHHHHHHhCHH-HHHHHHHcCCcCC-HHHHHHCCCceEeeChhHHHHHHH---------------
Confidence 99999999999999999999999998 9999999999999 999999999999999998874322
Q ss_pred HHHHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 012534 301 VALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSK 380 (461)
Q Consensus 301 ~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~ 380 (461)
++|+ +|+++||.+++.+|++++.
T Consensus 212 -----------------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~ 234 (278)
T 4f47_A 212 -----------------------------------------------------EIAE----IIAANGPLAVQAILRTIRE 234 (278)
T ss_dssp -----------------------------------------------------HHHH----HHHHSCHHHHHHHHHHHHH
T ss_pred -----------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHH
Confidence 3444 7999999999999999998
Q ss_pred HhhhcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCC
Q 012534 381 VASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 435 (461)
Q Consensus 381 ~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~ 435 (461)
.. ..+++++++.|.+.+..++.++|++||+++|+ +| |+|+|+++
T Consensus 235 ~~---------~~~l~~~l~~e~~~~~~~~~s~d~~eg~~Af~-ek-r~p~f~g~ 278 (278)
T 4f47_A 235 TE---------GMHENEAFKIDTRIGIEVFLSDDAKEGPQAFA-QK-RKPNFQNR 278 (278)
T ss_dssp TT---------TSCHHHHHHHHHHHHGGGGGSSHHHHHHHHHH-TT-SCCCCCCC
T ss_pred hc---------cCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHh-cC-CCCCCCCC
Confidence 76 56899999999999999999999999999999 77 89999864
No 21
>3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} SCOP: c.14.1.0 PDB: 3r9s_A 3r0o_A
Probab=100.00 E-value=7e-56 Score=434.48 Aligned_cols=257 Identities=24% Similarity=0.309 Sum_probs=222.6
Q ss_pred ccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCC
Q 012534 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNT 144 (461)
Q Consensus 65 ~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~ 144 (461)
++.|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|+++||+|+|++++.......
T Consensus 8 ~~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~--- 83 (267)
T 3r9t_A 8 APGALAER-RGNVMVITINRPEARNAINAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIARRENLY--- 83 (267)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCHHHHHTTCCCS---
T ss_pred CCcEEEEE-ECCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCceeCCcChHHHhcccchh---
Confidence 46688887 79999999999999999999999999999999999999999999999867999999999986421110
Q ss_pred CCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEeccc
Q 012534 145 PLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPE 224 (461)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe 224 (461)
. .. . . .+. ...+ .+.++||||||+|||+|+|||++|+++|||||++++++|++||
T Consensus 84 ~-~~----------------~-~---~~~---~~~~-~~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe 138 (267)
T 3r9t_A 84 H-PD----------------H-P---EWG---FAGY-VRHFIDKPTIAAVNGTALGGGTELALASDLVVADERAQFGLPE 138 (267)
T ss_dssp C-TT----------------C-G---GGC---GGGT-TTCCCSSCEEEEECSEECTHHHHHHHHSSEEEEETTCEECCGG
T ss_pred h-HH----------------H-H---hHH---HHHH-HHHhCCCCEEEEECCEEEhHHHHHHHhCCEEEEcCCCEEECcc
Confidence 0 00 0 0 000 0111 1238999999999999999999999999999999999999999
Q ss_pred cccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHHH
Q 012534 225 NGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALL 304 (461)
Q Consensus 225 ~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~l 304 (461)
+++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||+|||++++.+.+.
T Consensus 139 ~~~Gl~p~~g~~~~L~r~vG~~-~A~~l~ltg~~i~-A~eA~~~GLv~~vv~~~~l~~~a~------------------- 197 (267)
T 3r9t_A 139 VKRGLIAAAGGVFRIAEQLPRK-VAMRLLLTGEPLS-AAAARDWGLINEVVEAGSVLDAAL------------------- 197 (267)
T ss_dssp GGTTCCCTTTHHHHHHHHSCHH-HHHHHHHHCCCEE-HHHHHHHTSSSEEECTTCHHHHHH-------------------
T ss_pred cccCCCCCccHHHHHHHHcCHH-HHHHHHHcCCCCC-HHHHHHCCCccEEcChhHHHHHHH-------------------
Confidence 9999999999999999999998 9999999999999 999999999999999999874322
Q ss_pred HhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHH---HHHH
Q 012534 305 AKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKY---FSKV 381 (461)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~---l~~~ 381 (461)
++|+ +|+++||.+++.+|++ ++..
T Consensus 198 -------------------------------------------------~~a~----~la~~~p~a~~~~K~~~~~l~~~ 224 (267)
T 3r9t_A 198 -------------------------------------------------ALAS----AITVNAPLSVQASKRIAYGVDDG 224 (267)
T ss_dssp -------------------------------------------------HHHH----HHHTSCHHHHHHHHHHHTTEETT
T ss_pred -------------------------------------------------HHHH----HHHhCChHHHHHHHHHHHHHHHh
Confidence 3444 7999999999999999 8766
Q ss_pred hhhcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCC
Q 012534 382 ASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 435 (461)
Q Consensus 382 ~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~ 435 (461)
. ..+++++++.|...+..++.++|++||+++|+ +| |+|+|+++
T Consensus 225 ~---------~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~-ek-R~P~f~g~ 267 (267)
T 3r9t_A 225 V---------VVGDEPGWDRTMREMRALLKSEDAKEGPRAFA-EK-REPVWQAR 267 (267)
T ss_dssp E---------EGGGHHHHHHHHHHHHHHTTSSHHHHHHHHHH-TT-SCCCCCCC
T ss_pred h---------cCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-cC-CCCCCCCC
Confidence 5 45799999999999999999999999999999 77 89999864
No 22
>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M}
Probab=100.00 E-value=1.9e-56 Score=444.83 Aligned_cols=270 Identities=21% Similarity=0.299 Sum_probs=182.4
Q ss_pred CCccceEEEEecC-cEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhc
Q 012534 63 GAEEFVKGNVHPN-GVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKD 141 (461)
Q Consensus 63 ~~~~~i~~~~~~~-~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~ 141 (461)
..++.|.++. ++ +|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.......
T Consensus 26 ~~~~~v~~~~-~~~~Va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G-~~FcaG~Dl~~~~~~~~~~ 103 (298)
T 3qre_A 26 DAQDAVLYEA-TPGGVAIITFNRADRLNAWGPDLAAGFYAAIDRAEADPGIRVIVLTGRG-RGFCAGAYLGSADAAAGYD 103 (298)
T ss_dssp --CCSEEEEE-CTTSEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEEST-TCSEECC------------
T ss_pred CCCCeEEEEE-eCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CCcccCcCHHHHhhccccc
Confidence 3568899988 67 9999999999999999999999999999999999999999999998 8999999999986410000
Q ss_pred CCCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEe
Q 012534 142 RNTPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLA 221 (461)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~ 221 (461)
...... .....+....+.++..|.++||||||+|||+|+|||++|+++|||||++++++|+
T Consensus 104 ~~~~~~-------------------~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~ 164 (298)
T 3qre_A 104 KTMAKA-------------------KDANLADLVGERPPHFVTMLRKPVIAAINGPCVGIGLTQALMCDVRFAAAGAKFA 164 (298)
T ss_dssp ------------------------------------CCTTGGGGSSSCEEEEECSCEETHHHHHHHHSSEEEEETTCEEE
T ss_pred cccccc-------------------hhHHHHHHHHHHHHHHHHhCCCCEEEEECCceeecchHHHhhCCEEEEcCCCEEE
Confidence 000000 0000011222345667899999999999999999999999999999999999999
Q ss_pred ccccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHH
Q 012534 222 MPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIV 301 (461)
Q Consensus 222 ~pe~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~ 301 (461)
+||+++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||+|||++++.+.+.
T Consensus 165 ~pe~~~Gl~p~~g~~~~L~r~vG~~-~A~ellltg~~i~-A~eA~~~GLV~~vv~~~~l~~~a~---------------- 226 (298)
T 3qre_A 165 AVFARRGLIAEFGISWILPRLTSWA-VALDLLLSGRTFL-AEEAAQLGLVKEVVTPEQLMPRAL---------------- 226 (298)
T ss_dssp CCCCHHHHHCTTSHHHHHHHHSCHH-HHHHHHHHCCEEE-HHHHHHTTSCSEEECGGGHHHHHH----------------
T ss_pred CcccccCCCcchhHHHHHHHhcCHH-HHHHHHHcCCCCC-HHHHHHcCCCeEecCHHHHHHHHH----------------
Confidence 9999999999999999999999998 9999999999999 999999999999999988765322
Q ss_pred HHHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcC-CchHHHHHHHHHHH
Q 012534 302 ALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKG-APFSLCLTQKYFSK 380 (461)
Q Consensus 302 ~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~-sp~al~~tk~~l~~ 380 (461)
++|+ +|+.+ ||.+++.+|++++.
T Consensus 227 ----------------------------------------------------~~A~----~la~~~~p~a~~~~K~~l~~ 250 (298)
T 3qre_A 227 ----------------------------------------------------EYAE----DIARYCSPSSMAVIKRQVYG 250 (298)
T ss_dssp ----------------------------------------------------HHHH----HHHHHSCHHHHHHHHHHHHG
T ss_pred ----------------------------------------------------HHHH----HHHccCCHHHHHHHHHHHHh
Confidence 4444 78888 99999999999998
Q ss_pred HhhhcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCCCcc
Q 012534 381 VASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLE 438 (461)
Q Consensus 381 ~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~~~~ 438 (461)
.. ..++.+.+..|...+..++.++|++||+++|+ +| |+|+|+++..+
T Consensus 251 ~~---------~~~l~~~~~~e~~~~~~~~~s~d~~Egv~AF~-ek-R~P~f~~~~~~ 297 (298)
T 3qre_A 251 DA---------TRDVVEATSHAEVLLREAMPRPDVIEGIVSFL-EK-RPPQFPSLTSS 297 (298)
T ss_dssp GG---------GC---------------------------------------------
T ss_pred hh---------cCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-cC-CCCCCCCCCCC
Confidence 76 56789999999999999999999999999999 77 89999987443
No 23
>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B*
Probab=100.00 E-value=3.3e-55 Score=430.31 Aligned_cols=262 Identities=21% Similarity=0.270 Sum_probs=228.7
Q ss_pred ceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCC
Q 012534 67 FVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPL 146 (461)
Q Consensus 67 ~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~ 146 (461)
.|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++......
T Consensus 4 ~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~------ 75 (269)
T 1nzy_A 4 AIGHRV-EDGVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAE-DAFCAGFYLREIPLDKGV------ 75 (269)
T ss_dssp SEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEST-TCSBCCBCGGGSCSSSHH------
T ss_pred eEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCC-CCcccCcCHHHHhhcccc------
Confidence 477776 789999999999999999999999999999999999999999999998 899999999986421000
Q ss_pred CCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEeccccc
Q 012534 147 VPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENG 226 (461)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~ 226 (461)
.........+....+.++.+|.++||||||+|||+|+|||++|+++|||||++++++|++||++
T Consensus 76 ----------------~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~ 139 (269)
T 1nzy_A 76 ----------------AGVRDHFRIAALWWHQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAWHT 139 (269)
T ss_dssp ----------------HHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHH
T ss_pred ----------------cChHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEEeCcccc
Confidence 0000001124444567788999999999999999999999999999999999999999999999
Q ss_pred cCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHHHHh
Q 012534 227 IGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAK 306 (461)
Q Consensus 227 lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~l~~ 306 (461)
+|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||++||++++.+.+.
T Consensus 140 ~Gl~p~~g~~~~l~~~vG~~-~a~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a~--------------------- 196 (269)
T 1nzy_A 140 IGIGNDTATSYSLARIVGMR-RAMELMLTNRTLY-PEEAKDWGLVSRVYPKDEFREVAW--------------------- 196 (269)
T ss_dssp HTCCCCTTHHHHHHHHHHHH-HHHHHHHHCCCBC-HHHHHHHTSCSCEECHHHHHHHHH---------------------
T ss_pred cCCCCCccHHHHHHHHhhHH-HHHHHHHcCCCCC-HHHHHHCCCccEeeCHHHHHHHHH---------------------
Confidence 99999999999999999997 9999999999999 999999999999999766653221
Q ss_pred hcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhcC
Q 012534 307 YSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHG 386 (461)
Q Consensus 307 ~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~~~~ 386 (461)
++|+ +|+++||.+++.+|++++...
T Consensus 197 -----------------------------------------------~~a~----~la~~~p~a~~~~K~~l~~~~---- 221 (269)
T 1nzy_A 197 -----------------------------------------------KVAR----ELAAAPTHLQVMAKERFHAGW---- 221 (269)
T ss_dssp -----------------------------------------------HHHH----HHHHSCHHHHHHHHHHHHHHT----
T ss_pred -----------------------------------------------HHHH----HHHcCCHHHHHHHHHHHHhhh----
Confidence 4444 799999999999999999876
Q ss_pred CCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCCCc
Q 012534 387 KTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPASL 437 (461)
Q Consensus 387 ~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~~~ 437 (461)
..++.++++.|.+.+..++.++|++||+++|+ +| |+|+|+++++
T Consensus 222 -----~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~-ek-r~p~f~~~~l 265 (269)
T 1nzy_A 222 -----MQPVEECTEFEIQNVIASVTHPHFMPCLTRFL-DG-HRADRPQVEL 265 (269)
T ss_dssp -----TSCHHHHHHHHHHHHHHHHHSTTHHHHHHHHH-TT-CCTTCCSSCC
T ss_pred -----cCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHH-hc-CCCCCCCCCC
Confidence 56899999999999999999999999999999 77 8999999875
No 24
>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus}
Probab=100.00 E-value=5.5e-55 Score=425.97 Aligned_cols=255 Identities=26% Similarity=0.470 Sum_probs=222.2
Q ss_pred cceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCC
Q 012534 66 EFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTP 145 (461)
Q Consensus 66 ~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~ 145 (461)
+.|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++......
T Consensus 3 ~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~----- 75 (257)
T 2ej5_A 3 ETIRYEV-KGQVAWLTLNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAG-RAFCAGEDLSGVTEEMDH----- 75 (257)
T ss_dssp SSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESS-SCSBCCBCC-------CH-----
T ss_pred CceEEEe-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCC-CCccCCcCHHHHhhccch-----
Confidence 4577777 789999999999999999999999999999999999999999999998 899999999987531100
Q ss_pred CCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEecccc
Q 012534 146 LVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPEN 225 (461)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe~ 225 (461)
...... ..+.++..|.++||||||+|||+|+|||++|+++|||||++++++|++||+
T Consensus 76 ---------------------~~~~~~--~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~ 132 (257)
T 2ej5_A 76 ---------------------GDVLRS--RYAPMMKALHHLEKPVVAAVNGAAAGAGMSLALACDFRLLSEKASFAPAFI 132 (257)
T ss_dssp ---------------------HHHHHH--THHHHHHHHHHCCSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGG
T ss_pred ---------------------hHHHHH--HHHHHHHHHHhCCCCEEEEECccccchhHHHHHhCCEEEEcCCCEEeCccc
Confidence 000111 245677889999999999999999999999999999999999999999999
Q ss_pred ccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHHHH
Q 012534 226 GIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLA 305 (461)
Q Consensus 226 ~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~l~ 305 (461)
++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||++||++++.+.+.
T Consensus 133 ~~Gl~p~~g~~~~l~~~vG~~-~a~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a~-------------------- 190 (257)
T 2ej5_A 133 HVGLVPDAGHLYYLPRLVGRA-KALELAVLGEKVT-AEEAAALGLATKVIPLSDWEEEVK-------------------- 190 (257)
T ss_dssp GGTCCCCTTHHHHHHHHHCHH-HHHHHHHHCCCEE-HHHHHHHTCCSEEECGGGHHHHHH--------------------
T ss_pred ccCCCCcchHHHHHHHHhCHH-HHHHHHHhCCccC-HHHHHHcCCcceecChhHHHHHHH--------------------
Confidence 999999999999999999998 9999999999999 999999999999999888764222
Q ss_pred hhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhc
Q 012534 306 KYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAH 385 (461)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~~~ 385 (461)
++|+ +|+.+||.+++.+|++++...
T Consensus 191 ------------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~~~--- 215 (257)
T 2ej5_A 191 ------------------------------------------------QFAE----RLSAMPTKAIGLIKRLLRESE--- 215 (257)
T ss_dssp ------------------------------------------------HHHH----HHHTSCHHHHHHHHHHHHHHH---
T ss_pred ------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHHhh---
Confidence 3444 799999999999999999876
Q ss_pred CCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCC
Q 012534 386 GKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 435 (461)
Q Consensus 386 ~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~ 435 (461)
..++.++++.|.+.+..++.++|++||+++|+ +| |+|+|+++
T Consensus 216 ------~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~-ek-r~p~~~~~ 257 (257)
T 2ej5_A 216 ------ETTFDRYLEREAECQRIAGLTSDHREGVKAFF-EK-RKPLFQGN 257 (257)
T ss_dssp ------HSCHHHHHHHHHHHHHHHHHSHHHHHHHHHHT-TT-CCCCCCCC
T ss_pred ------cCCHHHHHHHHHHHHHHHhCChHHHHHHHHHh-cC-CCCCCCCC
Confidence 46899999999999999999999999999999 77 89999863
No 25
>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus}
Probab=100.00 E-value=4.5e-55 Score=428.43 Aligned_cols=254 Identities=19% Similarity=0.274 Sum_probs=220.6
Q ss_pred ccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCC
Q 012534 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNT 144 (461)
Q Consensus 65 ~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~ 144 (461)
++.|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++ ... ....
T Consensus 8 ~~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~-~~~---~~~~- 80 (265)
T 3rsi_A 8 ARELLVER-DGPVVILTMNRPHRRNALSTNMVSQFAAAWDEIDHDDGIRAAILTGAG-SAYCVGGDLS-DGW---MVRD- 80 (265)
T ss_dssp -CCEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEEST-TCSEECC---------------
T ss_pred CCcEEEEE-ECCEEEEEEcCcccccCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CCcccCcCCC-ccc---ccch-
Confidence 56788887 799999999999999999999999999999999999999999999998 8999999998 211 0000
Q ss_pred CCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHH-HHHHH-h--hCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceE
Q 012534 145 PLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYS-LICKI-S--EYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLL 220 (461)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l-~--~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f 220 (461)
..+....+. ++..+ . ++||||||+|||+|+|||++|+++|||||++++++|
T Consensus 81 -------------------------~~~~~~~~~~~~~~l~~~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f 135 (265)
T 3rsi_A 81 -------------------------GSAPPLDPATIGKGLLLSHTLTKPLIAAVNGACLGGGCEMLQQTDIRVSDEHATF 135 (265)
T ss_dssp -----------------------------CCCHHHHHHHTTSSCCCSSCEEEEECSCEETHHHHHHTTCSEEEEETTCEE
T ss_pred -------------------------HHHHHHhHHHHHHHHHHhcCCCCCEEEEECCeeeHHHHHHHHHCCEEEecCCCEE
Confidence 002212234 66778 8 999999999999999999999999999999999999
Q ss_pred eccccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHH
Q 012534 221 AMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDI 300 (461)
Q Consensus 221 ~~pe~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~ 300 (461)
++||+++|++|++|++++|++++|.. ++++|++||+.++ |+||+++||||++||++++.+.+.
T Consensus 136 ~~pe~~~Gl~p~~g~~~~l~~~vG~~-~a~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a~--------------- 198 (265)
T 3rsi_A 136 GLPEVQRGLVPGAGSMVRLKRQIPYT-KAMEMILTGEPLT-AFEAYHFGLVGHVVPAGTALDKAR--------------- 198 (265)
T ss_dssp ECGGGGGTCCCTTTHHHHHHHHSCHH-HHHHHHHHCCCEE-HHHHHHTTSCSEEESTTCHHHHHH---------------
T ss_pred ECchhccCCCCCccHHHHHHHHhCHH-HHHHHHHcCCCCC-HHHHHHCCCccEecChhHHHHHHH---------------
Confidence 99999999999999999999999998 9999999999999 999999999999999998875322
Q ss_pred HHHHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 012534 301 VALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSK 380 (461)
Q Consensus 301 ~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~ 380 (461)
++|+ +|+++||.+++.+|++++.
T Consensus 199 -----------------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~ 221 (265)
T 3rsi_A 199 -----------------------------------------------------SLAD----RIVRNGPLAVRNAKEAIVR 221 (265)
T ss_dssp -----------------------------------------------------HHHH----HHHTSCHHHHHHHHHHHHH
T ss_pred -----------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHH
Confidence 3444 7999999999999999998
Q ss_pred HhhhcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCC
Q 012534 381 VASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 435 (461)
Q Consensus 381 ~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~ 435 (461)
.. ..+++++++.|...+..++.++|++||+++|+ +| |+|+|+++
T Consensus 222 ~~---------~~~l~~~~~~e~~~~~~~~~s~d~~eg~~af~-ek-r~p~f~g~ 265 (265)
T 3rsi_A 222 SG---------WLAEEDARAIEARLTRPVITSADAREGLAAFK-EK-REARFTGR 265 (265)
T ss_dssp HT---------TCCHHHHHHHHHHHHHHHHTSHHHHHHHHHHH-HT-SCCCCCCC
T ss_pred hh---------cCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHH-cC-CCCCCCCC
Confidence 76 56899999999999999999999999999999 67 89999874
No 26
>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis}
Probab=100.00 E-value=8.6e-55 Score=430.62 Aligned_cols=260 Identities=22% Similarity=0.292 Sum_probs=231.4
Q ss_pred CCccceEEEEec--CcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhh
Q 012534 63 GAEEFVKGNVHP--NGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQK 140 (461)
Q Consensus 63 ~~~~~i~~~~~~--~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~ 140 (461)
|+++ |.++. + ++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++...
T Consensus 22 m~~~-v~~~~-~~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G-~~F~aG~Dl~~~~~~--- 95 (286)
T 3myb_A 22 MSEP-LLLQD-RDERGVVTLTLNRPQAFNALSEAMLAALGEAFGTLAEDESVRAVVLAASG-KAFCAGHDLKEMRAE--- 95 (286)
T ss_dssp --CC-SEEEE-ECTTSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECS-SCSBCCBCHHHHHSS---
T ss_pred Ccee-EEEEE-ecCCCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCC-CCccCCcChhhhhcc---
Confidence 3444 77887 6 89999999999999999999999999999999999999999999998 899999999998640
Q ss_pred cCCCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceE
Q 012534 141 DRNTPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLL 220 (461)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f 220 (461)
. .......++...+.++.+|.++||||||+|||+|+|||++|+++|||||++++++|
T Consensus 96 ~-----------------------~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f 152 (286)
T 3myb_A 96 P-----------------------SREYYEKLFARCTDVMLAIQRLPAPVIARVHGIATAAGCQLVAMCDLAVATRDARF 152 (286)
T ss_dssp C-----------------------CHHHHHHHHHHHHHHHHHHHHSSSCEEEEECSCEETHHHHHHHHSSEEEEETTCEE
T ss_pred c-----------------------cHHHHHHHHHHHHHHHHHHHcCCCCEEEEECCeehHHHHHHHHhCCEEEEcCCCEE
Confidence 0 01123345666778889999999999999999999999999999999999999999
Q ss_pred eccccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHH
Q 012534 221 AMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDI 300 (461)
Q Consensus 221 ~~pe~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~ 300 (461)
++||+++|++ ++|++++|++++|.. ++++|++||+.|+ |+||+++||||+|||++++.+.+.
T Consensus 153 ~~pe~~lGl~-~~g~~~~L~r~vG~~-~A~~llltG~~i~-A~eA~~~GLv~~vv~~~~l~~~a~--------------- 214 (286)
T 3myb_A 153 AVSGINVGLF-CSTPGVALSRNVGRK-AAFEMLVTGEFVS-ADDAKGLGLVNRVVAPKALDDEIE--------------- 214 (286)
T ss_dssp ECGGGGGTCC-CHHHHHHHTTTSCHH-HHHHHHHHCCCEE-HHHHHHHTSCSEEECGGGHHHHHH---------------
T ss_pred ECcccccCCC-CchHHHHHHHHcCHH-HHHHHHHcCCCCC-HHHHHHCCCCcEecCHHHHHHHHH---------------
Confidence 9999999999 788999999999998 9999999999999 999999999999999888764322
Q ss_pred HHHHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 012534 301 VALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSK 380 (461)
Q Consensus 301 ~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~ 380 (461)
+||+ +|+++||.+++.+|++++.
T Consensus 215 -----------------------------------------------------~~a~----~la~~~p~a~~~~K~~l~~ 237 (286)
T 3myb_A 215 -----------------------------------------------------AMVS----KIVAKPRAAVAMGKALFYR 237 (286)
T ss_dssp -----------------------------------------------------HHHH----HHHHSCHHHHHHHHHHHHH
T ss_pred -----------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHH
Confidence 4444 7899999999999999998
Q ss_pred HhhhcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCCCc
Q 012534 381 VASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPASL 437 (461)
Q Consensus 381 ~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~~~ 437 (461)
.. ..+++++++.|.+.+..++.++|++||+++|+ +| |+|+|+++..
T Consensus 238 ~~---------~~~l~~~l~~e~~~~~~~~~s~d~~egi~aFl-ek-r~p~f~g~~p 283 (286)
T 3myb_A 238 QI---------ETDIESAYADAGTTMACNMMDPSALEGVSAFL-EK-RRPEWHTPQP 283 (286)
T ss_dssp HH---------TSCHHHHHHHHHHHHHHHHHSHHHHHHHHHHH-TT-SCCCCCCCC-
T ss_pred hh---------cCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-cc-CCCCCCCCCC
Confidence 87 56899999999999999999999999999999 77 8999998753
No 27
>3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} SCOP: c.14.1.0
Probab=100.00 E-value=1.4e-55 Score=433.92 Aligned_cols=262 Identities=25% Similarity=0.311 Sum_probs=220.1
Q ss_pred cceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCC
Q 012534 66 EFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTP 145 (461)
Q Consensus 66 ~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~ 145 (461)
+.|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++...........
T Consensus 11 ~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~~~~ 88 (274)
T 3tlf_A 11 DTIKYEV-DGHTATITLNRPDALNALSPHMITELRAAYHEAENDDRVWLLVVTGTG-RAFCSGADVKEIPEDGKVIYERP 88 (274)
T ss_dssp SSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEST-TEEECCBC--------------C
T ss_pred CceEEEE-ECCEEEEEECCccccCCCCHHHHHHHHHHHHHHhcCCCeEEEEEeCCC-CCcccCcCHHHHhhccccccccc
Confidence 5688887 799999999999999999999999999999999999999999999998 89999999999865322000000
Q ss_pred CCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEecccc
Q 012534 146 LVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPEN 225 (461)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe~ 225 (461)
... ....+...+.++..|.++||||||+|||+|+|||++|+++|||||++++++|++||+
T Consensus 89 ~~~--------------------~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~ 148 (274)
T 3tlf_A 89 YLS--------------------TYDQWEAPQEGTPPFRTMAKPVLTAVNGICCGAGMDWVTTTDIVIASEQATFFDPHV 148 (274)
T ss_dssp TTC--------------------SGGGGSCCCTTCCCTTSCCSCEEEEECSEEEGGGHHHHHHSSEEEEETTCEEECCGG
T ss_pred hhh--------------------HHHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECccc
Confidence 000 000111223455678999999999999999999999999999999999999999999
Q ss_pred ccCCCCCchHHHHHhcCCCchHHHHHHhhcCC--CCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHH
Q 012534 226 GIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGK--RISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVAL 303 (461)
Q Consensus 226 ~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~--~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~ 303 (461)
++|++| +|++++|++++|.. ++++|++||+ .|+ |+||+++||||+|||++++.+.+.
T Consensus 149 ~~Gl~p-~g~~~~L~r~vG~~-~A~~l~ltg~~~~~~-A~eA~~~GLv~~vv~~~~l~~~a~------------------ 207 (274)
T 3tlf_A 149 SIGLVA-GRELVRVSRVLPRS-IALRMALMGKHERMS-AQRAYELGLISEIVEHDRLLERAH------------------ 207 (274)
T ss_dssp GGTCCC-CHHHHHHTTTSCHH-HHHHHHHHGGGCCEE-HHHHHHHTSSSEEECGGGHHHHHH------------------
T ss_pred ccCccc-chHHHHHHHHhCHH-HHHHHHHcCCCCccC-HHHHHHCCCCCeecCHHHHHHHHH------------------
Confidence 999999 99999999999998 9999999999 999 999999999999999888764222
Q ss_pred HHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 012534 304 LAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVAS 383 (461)
Q Consensus 304 l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~ 383 (461)
++| ++|+++||.+++.+|++++...
T Consensus 208 --------------------------------------------------~~a----~~la~~~~~a~~~~K~~l~~~~- 232 (274)
T 3tlf_A 208 --------------------------------------------------EIA----DIVNSNAPLAVRGTRLAILKGL- 232 (274)
T ss_dssp --------------------------------------------------HHH----HHHHTSCHHHHHHHHHHHHHHT-
T ss_pred --------------------------------------------------HHH----HHHHhCCHHHHHHHHHHHHHHh-
Confidence 344 4799999999999999999876
Q ss_pred hcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCC
Q 012534 384 AHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 435 (461)
Q Consensus 384 ~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~ 435 (461)
..+++++++.|...+..++.++|++||+++|+ +| |+|+|+++
T Consensus 233 --------~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~-ek-r~p~f~g~ 274 (274)
T 3tlf_A 233 --------NVPLHEAEILAETFRERVLRTEDAAEGPRAFV-EK-RQPNWQCR 274 (274)
T ss_dssp --------TSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHH-TT-SCCCCCCC
T ss_pred --------cCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHh-cC-CCCCCCCC
Confidence 56899999999999999999999999999999 78 89999863
No 28
>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis}
Probab=100.00 E-value=1.6e-54 Score=424.67 Aligned_cols=257 Identities=18% Similarity=0.221 Sum_probs=217.5
Q ss_pred CCccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcC
Q 012534 63 GAEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDR 142 (461)
Q Consensus 63 ~~~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~ 142 (461)
|+++.|.++. +++|++||||||+++|+||.+|+.+|.++++.++.| ++|+|||||.| ++||+|+|++++........
T Consensus 4 m~~~~i~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d-~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~ 80 (267)
T 3hp0_A 4 VTYQTIKVRF-QASVCYITFHRPEANNTINDTLIEECLQVLNQCETS-TVTVVVLEGLP-EVFCFGADFQEIYQEMKRGR 80 (267)
T ss_dssp -CCSSEEEEE-ETTEEEEEECCGGGTTCBCSHHHHHHHHHHHHHHHS-SCCEEEEECCS-SCSBCCBCHHHHHHTTTTTC
T ss_pred CCCceEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhcC-CCEEEEEECCC-CceecCcCHHHHHhcccChH
Confidence 4567798987 799999999999999999999999999999999986 59999999998 89999999999876321111
Q ss_pred CCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEec
Q 012534 143 NTPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 222 (461)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~ 222 (461)
. .. .+....+.++.+|.++||||||+|||+|+|||++|+++|||||++++++|++
T Consensus 81 ~---~~----------------------~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~ 135 (267)
T 3hp0_A 81 K---QA----------------------SSQEPLYDLWMKLQTGPYVTISHVRGKVNAGGLGFVSATDIAIADQTASFSL 135 (267)
T ss_dssp C---SC----------------------CCCHHHHHHHHHHHHSSSEEEEEECSEEETTHHHHHHHSSEEEECTTCEEEC
T ss_pred H---HH----------------------HHHHHHHHHHHHHHcCCCCEEEEECCEEeehHHHHHHhCCEEEEcCCCEEEC
Confidence 0 00 0223445677889999999999999999999999999999999999999999
Q ss_pred cccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHH
Q 012534 223 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 302 (461)
Q Consensus 223 pe~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~ 302 (461)
||+++|++|++| +++|++++|.. +|++|++||+.|+ |+||+++||||+|||+.+.. +
T Consensus 136 pe~~~Gl~p~~g-~~~l~r~vG~~-~A~ellltg~~i~-A~eA~~~GLV~~vv~~~~~~--~------------------ 192 (267)
T 3hp0_A 136 SELLFGLYPACV-LPFLIRRIGRQ-KAHYMTLMTKPIS-VQEASEWGLIDAFDAESDVL--L------------------ 192 (267)
T ss_dssp CGGGGTCCCTTT-HHHHHHHHCHH-HHHHHHHHCCCBC-HHHHHHHTSSSCBCSCTTHH--H------------------
T ss_pred chhccCcCchhH-HHHHHHHhCHH-HHHHHHHcCCCCC-HHHHHHCCCcceecCCHHHH--H------------------
Confidence 999999999886 67899999998 9999999999999 99999999999999864421 1
Q ss_pred HHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 012534 303 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 382 (461)
Q Consensus 303 ~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~ 382 (461)
.++|+ +|+++||.+++.+|++++...
T Consensus 193 --------------------------------------------------~~~a~----~la~~~p~a~~~~K~~l~~~~ 218 (267)
T 3hp0_A 193 --------------------------------------------------RKHLL----RLRRLNKKGIAHYKQFMSSLD 218 (267)
T ss_dssp --------------------------------------------------HHHHH----HHTTSCHHHHHHHHHHHHHHC
T ss_pred --------------------------------------------------HHHHH----HHHhCCHHHHHHHHHHHHhcc
Confidence 14444 799999999999999999854
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCCC
Q 012534 383 SAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPAS 436 (461)
Q Consensus 383 ~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~~ 436 (461)
..+.+.++.|.+.+..++.++|++||+++|+ +| |+|+|++..
T Consensus 219 ----------~~~~~~~~~e~~~~~~~~~s~d~~Eg~~AF~-ek-r~P~~~~~~ 260 (267)
T 3hp0_A 219 ----------HQVSRAKATALTANQDMFSDPQNQMGIIRYV-ET-GQFPWEDQE 260 (267)
T ss_dssp ----------CHHHHHHHHHHHHHHHHTTSTTHHHHHHHHT-TS-CCC------
T ss_pred ----------cchHHHHHHHHHHHHHHhCCHHHHHHHHHHH-hc-CCCCCCCCC
Confidence 3478888999999999999999999999999 78 899998753
No 29
>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A
Probab=100.00 E-value=1.1e-54 Score=424.00 Aligned_cols=255 Identities=22% Similarity=0.310 Sum_probs=225.3
Q ss_pred ccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCC
Q 012534 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNT 144 (461)
Q Consensus 65 ~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~ 144 (461)
+..|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.....
T Consensus 4 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~----- 76 (258)
T 2pbp_A 4 FVSIAARQ-EGAVGIIELARPDVLNALSRQMVAEIVAAVEAFDRNEKVRVIVLTGRG-RAFAAGADIQEMAKDDP----- 76 (258)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEEST-TEEECCCCHHHHHTCCH-----
T ss_pred cceEEEEe-eCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCC-CCccCCcCHHHHhcccc-----
Confidence 45677777 789999999999999999999999999999999999999999999997 89999999998753110
Q ss_pred CCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEeccc
Q 012534 145 PLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPE 224 (461)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe 224 (461)
. ...+...+ .++..|.++||||||+|||+|+|||++|+++|||||++++++|++||
T Consensus 77 --------------------~---~~~~~~~~-~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe 132 (258)
T 2pbp_A 77 --------------------I---RLEWLNQF-ADWDRLSIVKTPMIAAVNGLALGGGFELALSCDLIVASSAAEFGFPE 132 (258)
T ss_dssp --------------------H---HHHHHCTT-HHHHHHHTCCSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGG
T ss_pred --------------------h---hHHHHHHH-HHHHHHHhCCCCEEEEEcCEEEhHHHHHHHhCCEEEEcCCCEEECcc
Confidence 0 00111112 45678899999999999999999999999999999999999999999
Q ss_pred cccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHHH
Q 012534 225 NGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALL 304 (461)
Q Consensus 225 ~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~l 304 (461)
+++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||++||++++.+.+.
T Consensus 133 ~~~Gl~p~~g~~~~l~~~vG~~-~a~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a~------------------- 191 (258)
T 2pbp_A 133 VNLGVMPGAGGTQRLTKLIGPK-RALEWLWTGARMS-AKEAEQLGIVNRVVSPELLMEETM------------------- 191 (258)
T ss_dssp GGGTCCCCSSHHHHHHHHHCHH-HHHHHHHHCCCEE-HHHHHHTTSCSEEECGGGHHHHHH-------------------
T ss_pred cccCCCCcccHHHHHHHHhCHH-HHHHHHHcCCccC-HHHHHHcCCcceeeChHHHHHHHH-------------------
Confidence 9999999999999999999997 9999999999999 999999999999999888764222
Q ss_pred HhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhh
Q 012534 305 AKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASA 384 (461)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~~ 384 (461)
+||+ +|+++||.+++.+|++++...
T Consensus 192 -------------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~~~-- 216 (258)
T 2pbp_A 192 -------------------------------------------------RLAG----RLAEQPPLALRLIKEAVQKAV-- 216 (258)
T ss_dssp -------------------------------------------------HHHH----HHHTSCHHHHHHHHHHHHHHH--
T ss_pred -------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHHhh--
Confidence 4444 799999999999999999876
Q ss_pred cCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCC
Q 012534 385 HGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 435 (461)
Q Consensus 385 ~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~ 435 (461)
..++.++++.|.+.+..++.++|++||+++|+ +| |+|+|+++
T Consensus 217 -------~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~-ek-r~p~~~~~ 258 (258)
T 2pbp_A 217 -------DYPLYEGMQFERKNFYLLFASEDQKEGMAAFL-EK-RKPRFQGK 258 (258)
T ss_dssp -------HSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHH-TT-SCCCCCCC
T ss_pred -------cCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-cc-CCCCCCCC
Confidence 46899999999999999999999999999999 67 89999863
No 30
>3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} SCOP: c.14.1.0
Probab=100.00 E-value=3.1e-56 Score=436.59 Aligned_cols=257 Identities=26% Similarity=0.425 Sum_probs=224.2
Q ss_pred ccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCC
Q 012534 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNT 144 (461)
Q Consensus 65 ~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~ 144 (461)
++.|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++....... ..
T Consensus 6 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~-~~ 82 (265)
T 3qxz_A 6 VTELHEEI-RDGVAVLTLHGPSTRNSFTVELGRQLGAAYQRLDDDPAVRVIVLTGAP-PAFCSGAQISAAAETFAAP-RN 82 (265)
T ss_dssp CCEEEEEE-ETTEEEEEEECGGGTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEST-TEEECCBCSTTCTTCCCCC-CS
T ss_pred cceEEEEE-ECCEEEEEEcCCccCCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCC-CccccCcChHHHhhccchh-HH
Confidence 45688887 799999999999999999999999999999999999999999999998 8999999999875421110 00
Q ss_pred CCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEeccc
Q 012534 145 PLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPE 224 (461)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe 224 (461)
. ++.. +.++.++.++||||||+|||+|+|||++|+++||+||++++++|++||
T Consensus 83 ~--------------------------~~~~-~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe 135 (265)
T 3qxz_A 83 P--------------------------DFSA-SPVQPAAFELRTPVIAAVNGHAIGIGMTLALHADIRILAEEGRYAIPQ 135 (265)
T ss_dssp S--------------------------CCCS-CCSSSCGGGSSSCEEEEECSEEETHHHHHHTTSSEEEEETTCCEECCG
T ss_pred H--------------------------HHHH-HHHHHHHHhCCCCEEEEECCEEehHhHHHHHHCCEEEEcCCCEEECcc
Confidence 0 1111 234557889999999999999999999999999999999999999999
Q ss_pred cccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHHH
Q 012534 225 NGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALL 304 (461)
Q Consensus 225 ~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~l 304 (461)
+++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||+|||++++.+.+.
T Consensus 136 ~~~Gl~p~~g~~~~l~r~vG~~-~A~~l~ltg~~~~-A~eA~~~GLv~~vv~~~~l~~~a~------------------- 194 (265)
T 3qxz_A 136 VRFGVAPDALAHWTLPRLVGTA-VAAELLLTGASFS-AQRAVETGLANRCLPAGKVLGAAL------------------- 194 (265)
T ss_dssp GGGTSCCCTTHHHHTHHHHHHH-HHHHHHHHCCCBC-HHHHHHHTSCSEEECHHHHHHHHH-------------------
T ss_pred cccCcCCCccHHHHHHHHhCHH-HHHHHHHcCCCcC-HHHHHHCCCccEeeCHHHHHHHHH-------------------
Confidence 9999999999999999999997 9999999999999 999999999999999876653222
Q ss_pred HhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcC-CchHHHHHHHHHHHHhh
Q 012534 305 AKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKG-APFSLCLTQKYFSKVAS 383 (461)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~-sp~al~~tk~~l~~~~~ 383 (461)
++|+ +|+++ ||.+++.+|++++...
T Consensus 195 -------------------------------------------------~~a~----~la~~~~p~a~~~~K~~l~~~~- 220 (265)
T 3qxz_A 195 -------------------------------------------------RMAH----DIATNVAPESAALTKRLLWDAQ- 220 (265)
T ss_dssp -------------------------------------------------HHHH----HHHHHSCHHHHHHHHHHHHHHH-
T ss_pred -------------------------------------------------HHHH----HHHccCCHHHHHHHHHHHHHhh-
Confidence 3444 78888 9999999999999876
Q ss_pred hcCCCccccCCHHHH--HHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCCC
Q 012534 384 AHGKTDNELSKLSGV--MKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPAS 436 (461)
Q Consensus 384 ~~~~~~~~~~~l~~~--l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~~ 436 (461)
..++.++ ++.|...+..++.++|++||+++|+ +| |+|+|++++
T Consensus 221 --------~~~l~~~~~l~~e~~~~~~~~~s~d~~egi~Af~-ek-r~P~f~g~r 265 (265)
T 3qxz_A 221 --------MTGMSAAEVAARETADHLRLMGSQDAAEGPRAFI-DG-RPPRWAGQR 265 (265)
T ss_dssp --------HHTCCHHHHHHHHHHHHHHHHTSTHHHHHHHHHH-HT-SCCCCCCC-
T ss_pred --------cCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH-cC-CCCCCCCCC
Confidence 4567788 9999999999999999999999999 67 899999863
No 31
>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus}
Probab=100.00 E-value=4.4e-55 Score=426.27 Aligned_cols=250 Identities=21% Similarity=0.292 Sum_probs=222.0
Q ss_pred cceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCC
Q 012534 66 EFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTP 145 (461)
Q Consensus 66 ~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~ 145 (461)
+.|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++........
T Consensus 7 ~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~--- 81 (256)
T 3trr_A 7 DEVLIEQ-RDRVLLITINRPDARNAVNRAVSQGLAAAADQLDSSADLSVAIITGAG-GNFCAGMDLKAFVSGEAVLS--- 81 (256)
T ss_dssp CSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEGG-GCCCCCBCHHHHHHTCCCEE---
T ss_pred CceEEEE-ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCC-CceecCcCHHHhccccchhh---
Confidence 4578887 799999999999999999999999999999999999999999999998 89999999999875210000
Q ss_pred CCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEecccc
Q 012534 146 LVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPEN 225 (461)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe~ 225 (461)
. . .+ . +..+ .+||||||+|||+|+|||++|+++|||||++++++|++||+
T Consensus 82 --~---------------~------~~-----~-~~~~-~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~ 131 (256)
T 3trr_A 82 --E---------------R------GL-----G-FTNV-PPRKPIIAAVEGFALAGGTELVLSCDLVVAGRSAKFGIPEV 131 (256)
T ss_dssp --T---------------T------EE-----T-TSSS-CCSSCEEEEECSBCCTHHHHHHHTSSEEEEETTCEECCCGG
T ss_pred --h---------------h------hh-----h-HHHh-cCCCCEEEEECCeeeechhHHHHhCCEEEECCCCEEEehhh
Confidence 0 0 01 1 1234 89999999999999999999999999999999999999999
Q ss_pred ccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHHHH
Q 012534 226 GIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLA 305 (461)
Q Consensus 226 ~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~l~ 305 (461)
++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||++||++++.+.+.
T Consensus 132 ~~Gl~p~~g~~~~l~r~vG~~-~a~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a~-------------------- 189 (256)
T 3trr_A 132 KRGLVAGAGGLLRLPNRIPYQ-VAMELALTGESFT-AEDAAKYGFINRLVDDGQALDTAL-------------------- 189 (256)
T ss_dssp GGTCCCCSSHHHHHHHHSCHH-HHHHHHHHCCCEE-HHHHGGGTCCSEEECTTCHHHHHH--------------------
T ss_pred ccCCCCCccHHHHHHHHhCHH-HHHHHHHhCCCcC-HHHHHHCCCeeEecChHHHHHHHH--------------------
Confidence 999999999999999999998 9999999999999 999999999999999998874322
Q ss_pred hhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhc
Q 012534 306 KYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAH 385 (461)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~~~ 385 (461)
++|+ +|+++||.+++.+|++++...
T Consensus 190 ------------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~~~--- 214 (256)
T 3trr_A 190 ------------------------------------------------ELAA----KITANGPLAVAATKRIIIESA--- 214 (256)
T ss_dssp ------------------------------------------------HHHH----HHHTSCHHHHHHHHHHHHHGG---
T ss_pred ------------------------------------------------HHHH----HHHcCCHHHHHHHHHHHHhhh---
Confidence 3443 799999999999999999876
Q ss_pred CCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCC
Q 012534 386 GKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 435 (461)
Q Consensus 386 ~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~ 435 (461)
..+++++++.|.+.+..++.++|++||+++|+ +| |+|+|+++
T Consensus 215 ------~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~-ek-r~p~f~g~ 256 (256)
T 3trr_A 215 ------SWAPEEAFAKQGEILMPIFVSEDAKEGAKAFA-EK-RAPVWQGK 256 (256)
T ss_dssp ------GSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHH-TT-SCCCCCCC
T ss_pred ------cCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHh-cC-CCCCCCCC
Confidence 56899999999999999999999999999999 77 89999874
No 32
>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A*
Probab=100.00 E-value=3.4e-55 Score=428.37 Aligned_cols=257 Identities=19% Similarity=0.256 Sum_probs=223.9
Q ss_pred CccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEe-cCCCccccCCChhhHHHHhhhcC
Q 012534 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEG-SGPRAFCAGMDIKGVVAEIQKDR 142 (461)
Q Consensus 64 ~~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg-~G~~~FcaG~Dl~~~~~~~~~~~ 142 (461)
+|+.+.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+ +|+||||| .|+++||+|+|++++.......
T Consensus 2 ~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~-vr~vVltg~~g~~~F~aG~Dl~~~~~~~~~~- 78 (261)
T 1ef8_A 2 SYQYVNVVT-INKVAVIEFNYGRKLNALSKVFIDDLMQALSDLNRPE-IRCIILRAPSGSKVFSAGHDIHELPSGGRDP- 78 (261)
T ss_dssp CCSSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHTCSTT-CCEEEEECCTTCSEEECCSCSTTC-----CT-
T ss_pred CcceEEEEE-eCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCC-ceEEEEECCCCCCeeecCcChHhhhccCchh-
Confidence 456788887 7899999999999999999999999999999999999 99999999 8768999999999875421100
Q ss_pred CCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEec
Q 012534 143 NTPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 222 (461)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~ 222 (461)
.. ++...+.++.+|.++||||||+|||+|+|||++|+++|||||++++++|++
T Consensus 79 -~~--------------------------~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~ 131 (261)
T 1ef8_A 79 -LS--------------------------YDDPLRQITRMIQKFPKPIISMVEGSVWGGAFEMIMSSDLIIAASTSTFSM 131 (261)
T ss_dssp -TC--------------------------TTSHHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEEC
T ss_pred -HH--------------------------HHHHHHHHHHHHHhCCCCEEEEECCEEEeHhHHHHHhCCEEEecCCCEEeC
Confidence 00 112235667789999999999999999999999999999999999999999
Q ss_pred cccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHH
Q 012534 223 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 302 (461)
Q Consensus 223 pe~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~ 302 (461)
||+++|++|++|++++|++++|.. ++++|++||+.++ |+||+++||||++||++++.+.+.
T Consensus 132 pe~~~Gl~p~~g~~~~l~r~vG~~-~a~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a~----------------- 192 (261)
T 1ef8_A 132 TPVNLGVPYNLVGIHNLTRDAGFH-IVKELIFTASPIT-AQRALAVGILNHVVEVEELEDFTL----------------- 192 (261)
T ss_dssp CHHHHTCCCCHHHHHTTSSSSCHH-HHHHHHHHCCCEE-HHHHHHTTSCSEEECHHHHHHHHH-----------------
T ss_pred chhccCCCCCccHHHHHHHHhCHH-HHHHHHHcCCccC-HHHHHHCCCcccccCHHHHHHHHH-----------------
Confidence 999999999999999999999997 9999999999999 999999999999998766653222
Q ss_pred HHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 012534 303 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 382 (461)
Q Consensus 303 ~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~ 382 (461)
+||+ +|+++||.+++.+|++++...
T Consensus 193 ---------------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~~~ 217 (261)
T 1ef8_A 193 ---------------------------------------------------QMAH----HISEKAPLAIAVIKEELRVLG 217 (261)
T ss_dssp ---------------------------------------------------HHHH----HHTTSCHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHHhh
Confidence 4444 799999999999999999876
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHH--hhcCCCcHHHHHHhhhcCCCCCCCCCCC
Q 012534 383 SAHGKTDNELSKLSGVMKYEYRVAL--RSSLRSDFAEGVRAVLVDKDQNPKWNPA 435 (461)
Q Consensus 383 ~~~~~~~~~~~~l~~~l~~E~~~~~--~~~~s~d~~egv~afl~~K~r~P~w~~~ 435 (461)
..+++++++.|.+.+. .++.++|++||+++|+ +| |+|+|+++
T Consensus 218 ---------~~~~~~~~~~e~~~~~~~~~~~s~d~~eg~~af~-ek-r~p~~~~~ 261 (261)
T 1ef8_A 218 ---------EAHTMNSDEFERIQGMRRAVYDSEDYQEGMNAFL-EK-RKPNFVGH 261 (261)
T ss_dssp ---------HCCCCCHHHHHHHHHHHHHHHTSHHHHHHHHHHH-TT-SCCCCCCC
T ss_pred ---------cCCHHHHHHHHHHHhhHHHhhcCHHHHHHHHHHH-cc-CCCCCCCC
Confidence 4578889999999998 8999999999999999 67 89999863
No 33
>3lke_A Enoyl-COA hydratase; nysgrc, target 112 structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans}
Probab=100.00 E-value=8.9e-55 Score=425.81 Aligned_cols=260 Identities=17% Similarity=0.248 Sum_probs=222.7
Q ss_pred CccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCcc-ccCCChhhHHHHhhhcC
Q 012534 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAF-CAGMDIKGVVAEIQKDR 142 (461)
Q Consensus 64 ~~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~F-caG~Dl~~~~~~~~~~~ 142 (461)
+++.|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++| |+|+|++++........
T Consensus 2 s~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~FF~aG~Dl~~~~~~~~~~~ 79 (263)
T 3lke_A 2 SLSYVHTEI-QNDALYITLDYPEKKNGLDAELGTSLLEAIRAGNNETSIHSIILQSKH-RAYFSSGPRLEDLLICASDQS 79 (263)
T ss_dssp -CCSEEEEE-CSSEEEEEECCGGGTTBCCHHHHHHHHHHHHHHHHCSSCCEEEEEESC-TTEEECBSCHHHHHHHHHCSS
T ss_pred CCcEEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEEcCC-CceEecCcCHHHHHhhcccCC
Confidence 467788887 799999999999999999999999999999999999999999999998 788 99999999875211110
Q ss_pred CCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEec
Q 012534 143 NTPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 222 (461)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~ 222 (461)
......++...+.++.+|.++||||||+|||+|+|||++|+++|||||++++++|++
T Consensus 80 -----------------------~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~ 136 (263)
T 3lke_A 80 -----------------------DVRLREVLHVLNHCVLEIFTSPKVTVALINGYAYGGGFNMMLACDRRIALRRAKFLE 136 (263)
T ss_dssp -----------------------SHHHHHHHHHHHHHHHHHHTCSSEEEEEECSEEETHHHHGGGGSSEEEEETTCEEEC
T ss_pred -----------------------HHHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeeHHHHHHHHHCCEEEEcCCCEEeC
Confidence 012233566667888999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecC-CCChHHHHHHHHhcccCCChHHHHH
Q 012534 223 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVP-SGNLGSLKEALLAVTFSEDPHQDIV 301 (461)
Q Consensus 223 pe~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~-~~~l~~~~~ala~~~~~~~~~~~~~ 301 (461)
||+++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||+||| ++++.+.+.
T Consensus 137 pe~~~Gl~p~~g~~~~L~~~vG~~-~A~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~~l~~~a~---------------- 198 (263)
T 3lke_A 137 NFHKMGISPDLGASYFLPRIIGYE-QTMNLLLEGKLFT-SEEALRLGLIQEICENKQELQERVK---------------- 198 (263)
T ss_dssp CHHHHTCCCCTTHHHHHHHHHCHH-HHHHHHHHCCCEE-HHHHHHHTSSSEEESSHHHHHHHHH----------------
T ss_pred chHhhCCCCCccHHHHHHHHhCHH-HHHHHHHhCCCcC-HHHHHHcCCCcEecCChhHHHHHHH----------------
Confidence 999999999999999999999998 9999999999999 999999999999998 666653222
Q ss_pred HHHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 012534 302 ALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV 381 (461)
Q Consensus 302 ~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~ 381 (461)
+||+ +|+++||.+++.+|++++..
T Consensus 199 ----------------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~~ 222 (263)
T 3lke_A 199 ----------------------------------------------------NYLK----AVSEGYVPAIAATKKLLKGK 222 (263)
T ss_dssp ----------------------------------------------------HHHH----HHHTSCHHHHHHHHHHHHTT
T ss_pred ----------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHHh
Confidence 3444 89999999999999999987
Q ss_pred hhhcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCC
Q 012534 382 ASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWN 433 (461)
Q Consensus 382 ~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~ 433 (461)
. ..+++++++.|...+..++.++|++||+++|+ +| ++|.|.
T Consensus 223 ~---------~~~l~~~~~~e~~~~~~~~~s~d~~e~~~~~~-~~-~~~~~~ 263 (263)
T 3lke_A 223 A---------AEELKQQLEQETEELVALFKQTEIKKRLEALV-EG-HHHHHH 263 (263)
T ss_dssp H---------HHHHHHHHHHHHHHHHHHTTSHHHHHHHHHC-----------
T ss_pred h---------hcCHHHHHHHHHHHHHHHhcCHHHHHHHHhhh-cc-CCCCCC
Confidence 6 45799999999999999999999999999999 66 788884
No 34
>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A
Probab=100.00 E-value=9.5e-55 Score=427.59 Aligned_cols=254 Identities=18% Similarity=0.264 Sum_probs=225.1
Q ss_pred cCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCCCCCCCCC
Q 012534 74 PNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVPLK 153 (461)
Q Consensus 74 ~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~ 153 (461)
+++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|+++||+|+|++++.....
T Consensus 19 ~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~-------------- 84 (272)
T 1hzd_A 19 NRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSS-------------- 84 (272)
T ss_dssp GTTEEEEEECCGGGTTCBCTTHHHHHHHHHHHHHHCSSCSEEEEEESBTEEEECCBCHHHHTTSCH--------------
T ss_pred cCCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEecCCCCCCcCCCChhhhhccCh--------------
Confidence 689999999999999999999999999999999999999999999998679999999998642100
Q ss_pred CCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEeccccccCCCCCc
Q 012534 154 CGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDV 233 (461)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~lGl~P~~ 233 (461)
.....+....+.++.+|.++||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++
T Consensus 85 -------------~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~ 151 (272)
T 1hzd_A 85 -------------SEVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGG 151 (272)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHTCSSCEEEEESEEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCS
T ss_pred -------------HHHHHHHHHHHHHHHHHHhCCCCEEEEeCceEEecHHHHHHhCCEEEEcCCCEEeCchhccCCCCCc
Confidence 0112244455678889999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHHHHhhcCCCCC
Q 012534 234 GFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEG 313 (461)
Q Consensus 234 G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~l~~~~~~~~~ 313 (461)
|++++|++++|.. ++++|++||+.|+ |+||+++||||++||++++.+.+
T Consensus 152 g~~~~l~r~vG~~-~A~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~l~~~~----------------------------- 200 (272)
T 1hzd_A 152 GGTQRLPRAIGMS-LAKELIFSARVLD-GKEAKAVGLISHVLEQNQEGDAA----------------------------- 200 (272)
T ss_dssp SHHHHHHHHHCHH-HHHHHHHHTCEEE-HHHHHHHTSCSEEECCCTTSCHH-----------------------------
T ss_pred hHHHHHHHHhCHH-HHHHHHHcCCcCC-HHHHHHCCCcceecChhhhhHHH-----------------------------
Confidence 9999999999997 9999999999999 99999999999999998875311
Q ss_pred CchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhcCCCccccC
Q 012534 314 EAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELS 393 (461)
Q Consensus 314 ~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~ 393 (461)
.+.|.+++++|+.+||.+++.+|++++... ..
T Consensus 201 ---------------------------------------~~~a~~~a~~la~~~p~a~~~~K~~l~~~~---------~~ 232 (272)
T 1hzd_A 201 ---------------------------------------YRKALDLAREFLPQGPVAMRVAKLAINQGM---------EV 232 (272)
T ss_dssp ---------------------------------------HHHHHHHHHTTTTSCHHHHHHHHHHHHHHH---------TS
T ss_pred ---------------------------------------HHHHHHHHHHHHhCCHHHHHHHHHHHHHHh---------cC
Confidence 133444445899999999999999999876 56
Q ss_pred CHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCC
Q 012534 394 KLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 435 (461)
Q Consensus 394 ~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~ 435 (461)
++.++++.|...+..++.++|++||+++|+ +| |+|+|+++
T Consensus 233 ~~~~~l~~e~~~~~~~~~s~d~~egi~af~-ek-r~p~~~g~ 272 (272)
T 1hzd_A 233 DLVTGLAIEEACYAQTIPTKDRLEGLLAFK-EK-RPPRYKGE 272 (272)
T ss_dssp CHHHHHHHHHHHHHTTTTCHHHHHHHHHHT-TT-SCCCCCCC
T ss_pred CHHHHHHHHHHHHHHHhCCHHHHHHHHHHh-cC-CCCCCCCC
Confidence 899999999999999999999999999999 67 89999863
No 35
>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus}
Probab=100.00 E-value=5.3e-54 Score=420.80 Aligned_cols=255 Identities=22% Similarity=0.338 Sum_probs=226.7
Q ss_pred CccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEe-cCCCccccCCChhhHHHHhhhcC
Q 012534 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEG-SGPRAFCAGMDIKGVVAEIQKDR 142 (461)
Q Consensus 64 ~~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg-~G~~~FcaG~Dl~~~~~~~~~~~ 142 (461)
.++.+.++. +++|++|||||| ++|+||.+|+.+|.++++.++.|+++|+||||| .| ++||+|+|++++.. . .
T Consensus 7 ~~~~i~~~~-~~~v~~itlnrp-~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g-~~F~aG~Dl~~~~~-~--~- 79 (265)
T 2ppy_A 7 KKQYLTVFK-EDGIAEIHLHIN-KSNSYDLEFYKEFNAAIDDIRFDPDIKVVIVMSDVP-KFFSAGADINFLRS-A--D- 79 (265)
T ss_dssp ECSSEEEEE-ETTEEEEEECSS-TTCCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECST-TEEECCBCHHHHTT-S--C-
T ss_pred CCCeEEEEe-eCCEEEEEECCC-CCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEcCCC-CeeeeCcCHHHHhc-c--c-
Confidence 356788887 789999999999 999999999999999999999999999999999 76 89999999998642 0 0
Q ss_pred CCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHH-HHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCc-eE
Q 012534 143 NTPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAE-YSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKT-LL 220 (461)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a-~f 220 (461)
. ....+...+ +.++.+|.++||||||+|||+|+|||++|+++|||||+++++ +|
T Consensus 80 ---------------------~---~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~ag~f 135 (265)
T 2ppy_A 80 ---------------------P---RFKTQFCLFCNETLDKIARSPQVYIACLEGHTVGGGLEMALACDLRFMGDEAGKI 135 (265)
T ss_dssp ---------------------H---HHHHHHHHHHHHHHHHHHHSSSEEEEEECSEEETHHHHHHHTSSEEEEETTCCCE
T ss_pred ---------------------h---hHHHHHHHHHHHHHHHHHcCCCCEEEEECCEEeeHHHHHHHhCCEEEEeCCCCEE
Confidence 0 011123334 567788999999999999999999999999999999999999 99
Q ss_pred eccccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHH
Q 012534 221 AMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDI 300 (461)
Q Consensus 221 ~~pe~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~ 300 (461)
++||+++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||++||++++.+.+.
T Consensus 136 ~~pe~~~Gl~p~~g~~~~l~~~vG~~-~a~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a~--------------- 198 (265)
T 2ppy_A 136 GLPEVSLGVLAGTGGTQRLARLIGYS-RALDMNITGETIT-PQEALEIGLVNRVFPQAETRERTR--------------- 198 (265)
T ss_dssp ECCGGGGTCCCTTTHHHHHHHHHCHH-HHHHHHHHCCCBC-HHHHHHHTSSSEEECGGGHHHHHH---------------
T ss_pred ECcccccCCCCCchHHHHHHHHhCHH-HHHHHHHhCCccC-HHHHHHCCCcceecCHHHHHHHHH---------------
Confidence 99999999999999999999999997 9999999999999 999999999999999888764322
Q ss_pred HHHHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 012534 301 VALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSK 380 (461)
Q Consensus 301 ~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~ 380 (461)
++|+ +|+++||.+++.+|++++.
T Consensus 199 -----------------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~ 221 (265)
T 2ppy_A 199 -----------------------------------------------------EYAR----KLANSATYAVSNIKLAIMN 221 (265)
T ss_dssp -----------------------------------------------------HHHH----HHHTSCHHHHHHHHHHHHH
T ss_pred -----------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHH
Confidence 4444 7999999999999999998
Q ss_pred HhhhcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCC
Q 012534 381 VASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 434 (461)
Q Consensus 381 ~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~ 434 (461)
.. ..+++++++.|.+.+..++.++|++||+++|+ +| |+|+|++
T Consensus 222 ~~---------~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~-ek-r~p~~~~ 264 (265)
T 2ppy_A 222 GK---------EMPLNVAIRYEGELQNLLFRSEDAKEGLSAFL-EK-RQPNWKG 264 (265)
T ss_dssp HT---------TSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHH-TT-SCCCCCC
T ss_pred hh---------cCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-cC-CCCCCCC
Confidence 76 56899999999999999999999999999999 77 8999986
No 36
>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens}
Probab=100.00 E-value=2.5e-54 Score=427.48 Aligned_cols=256 Identities=22% Similarity=0.288 Sum_probs=226.9
Q ss_pred ccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCC
Q 012534 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNT 144 (461)
Q Consensus 65 ~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~ 144 (461)
+..+.++. +++|++|+||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.....
T Consensus 32 ~~~v~~~~-~~~V~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~FcaG~Dl~~~~~~~~----- 104 (287)
T 2vx2_A 32 PRPTSARQ-LDGIRNIVLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEG-PVFSSGHDLKELTEEQG----- 104 (287)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHTTTTCTTCCEEEEEESS-SEEECCSCCC-CCGGGC-----
T ss_pred CcceEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCC-CCccCCcCHHHHhcccc-----
Confidence 45678887 789999999999999999999999999999999999999999999998 89999999998642100
Q ss_pred CCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEeccc
Q 012534 145 PLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPE 224 (461)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe 224 (461)
......++...+.++.+|.++||||||+|||+|+|||++|+++|||||++++++|++||
T Consensus 105 ---------------------~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe 163 (287)
T 2vx2_A 105 ---------------------RDYHAEVFQTCSKVMMHIRNHPVPVIAMVNGLATAAGCQLVASCDIAVASDKSSFATPG 163 (287)
T ss_dssp ---------------------HHHHHHHHHHHHHHHHHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCG
T ss_pred ---------------------hhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEEEcHHHHHHHhCCEEEEcCCCEEECch
Confidence 01122344556678889999999999999999999999999999999999999999999
Q ss_pred cccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHHH
Q 012534 225 NGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALL 304 (461)
Q Consensus 225 ~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~l 304 (461)
+++|++|++|+++ |++++|.. ++++|++||+.|+ |+||+++||||+|||++++.+.+.
T Consensus 164 ~~lGl~p~~g~~~-L~r~vG~~-~A~~llltg~~i~-A~eA~~~GLv~~vv~~~~l~~~a~------------------- 221 (287)
T 2vx2_A 164 VNVGLFCSTPGVA-LARAVPRK-VALEMLFTGEPIS-AQEALLHGLLSKVVPEAELQEETM------------------- 221 (287)
T ss_dssp GGGTCCCHHHHHH-HHTTSCHH-HHHHHHHHCCCEE-HHHHHHHTSCSEEECGGGHHHHHH-------------------
T ss_pred hhhCCCCchHHHH-HHHHhhHH-HHHHHHHhCCCCC-HHHHHHCCCcceecCHHHHHHHHH-------------------
Confidence 9999999999999 99999997 9999999999999 999999999999999888764322
Q ss_pred HhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhh
Q 012534 305 AKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASA 384 (461)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~~ 384 (461)
+||+ +|+++||.+++.+|++++...
T Consensus 222 -------------------------------------------------~~a~----~la~~~p~a~~~~K~~l~~~~-- 246 (287)
T 2vx2_A 222 -------------------------------------------------RIAR----KIASLSRPVVSLGKATFYKQL-- 246 (287)
T ss_dssp -------------------------------------------------HHHH----HHHTSCHHHHHHHHHHHHHHT--
T ss_pred -------------------------------------------------HHHH----HHHcCCHHHHHHHHHHHHHhh--
Confidence 4444 799999999999999999876
Q ss_pred cCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCC
Q 012534 385 HGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 434 (461)
Q Consensus 385 ~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~ 434 (461)
..++.++++.|.+.+..++.++|++||+++|+ +| |+|+|++
T Consensus 247 -------~~~l~~~l~~e~~~~~~~~~s~d~~egi~af~-ek-r~p~f~g 287 (287)
T 2vx2_A 247 -------PQDLGTAYYLTSQAMVDNLALRDGQEGITAFL-QK-RKPVWSH 287 (287)
T ss_dssp -------TSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHH-TT-SCCCCCC
T ss_pred -------cCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-cC-CCCCCCC
Confidence 56899999999999999999999999999999 77 8999974
No 37
>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C*
Probab=100.00 E-value=2.3e-54 Score=425.69 Aligned_cols=264 Identities=22% Similarity=0.288 Sum_probs=204.5
Q ss_pred CCccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcC
Q 012534 63 GAEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDR 142 (461)
Q Consensus 63 ~~~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~ 142 (461)
..++.+.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++........
T Consensus 6 ~~~~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~FcaG~Dl~~~~~~~~~~~ 83 (276)
T 2j5i_A 6 GRWKTVKVEI-EDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAG-EAWTAGMDLKEYFREVDAGP 83 (276)
T ss_dssp TCCSSEEEEE-ETEEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTEEEEEEEEST-TCSBCCBCHHHHHHHHHHSC
T ss_pred CCCceEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CCCcCCcChhhHhhccccch
Confidence 3466788887 789999999999999999999999999999999999999999999998 89999999999864221110
Q ss_pred CCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHH-HHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEe
Q 012534 143 NTPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSL-ICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLA 221 (461)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~ 221 (461)
.. ....+....+.+ +..|.++||||||+|||+|+|||++|+++||+||++++++|+
T Consensus 84 ~~-----------------------~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~ 140 (276)
T 2j5i_A 84 EI-----------------------LQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFG 140 (276)
T ss_dssp TT-----------------------HHHHHHHHHHHHHTTTTTTCSSCEEEEECSCEEGGGHHHHHHSSEEEEETTCEEE
T ss_pred hH-----------------------HHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehhHHHHHHhCCEEEEcCCCEEe
Confidence 00 001122222333 567899999999999999999999999999999999999999
Q ss_pred ccccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHH
Q 012534 222 MPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIV 301 (461)
Q Consensus 222 ~pe~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~ 301 (461)
+||+++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||+|||++++.+.+.
T Consensus 141 ~pe~~~Gl~p~~g~~~~l~r~vG~~-~A~~l~ltg~~~~-A~eA~~~GLv~~vv~~~~l~~~a~---------------- 202 (276)
T 2j5i_A 141 LSEINWGIPPGNLVSKAMADTVGHR-QSLMYIMTGKTFG-GQKAAEMGLVNESVPLAQLREVTI---------------- 202 (276)
T ss_dssp CGGGGGTCCCCTTHHHHHHHHSCHH-HHHHHHHHCCEEE-HHHHHHHTSSSEEECHHHHHHHHH----------------
T ss_pred CcccccCCCCcchHHHHHHHHhCHH-HHHHHHHhCCccc-HHHHHHcCCccEeeCHHHHHHHHH----------------
Confidence 9999999999999999999999998 9999999999999 999999999999999776653222
Q ss_pred HHHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 012534 302 ALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV 381 (461)
Q Consensus 302 ~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~ 381 (461)
++|+ +|+++||.+++.+|++++..
T Consensus 203 ----------------------------------------------------~~a~----~la~~~p~a~~~~K~~l~~~ 226 (276)
T 2j5i_A 203 ----------------------------------------------------ELAR----NLLEKNPVVLRAAKHGFKRC 226 (276)
T ss_dssp ----------------------------------------------------HHHH----HHHTSCHHHHHHHHHHHHHH
T ss_pred ----------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHHH
Confidence 4444 79999999999999999987
Q ss_pred hhhcCCCccccCCHHHHHHHHHHHHHhh--cCCC-cHHHHHHhhhcCCC-CCCCCCCC
Q 012534 382 ASAHGKTDNELSKLSGVMKYEYRVALRS--SLRS-DFAEGVRAVLVDKD-QNPKWNPA 435 (461)
Q Consensus 382 ~~~~~~~~~~~~~l~~~l~~E~~~~~~~--~~s~-d~~egv~afl~~K~-r~P~w~~~ 435 (461)
. ..++.++++.|...+..+ +.++ |++||+++|+ +|+ |+|+|++.
T Consensus 227 ~---------~~~~~~~~~~e~~~~~~~~~~~s~~d~~eg~~AF~-ekr~r~p~~~~~ 274 (276)
T 2j5i_A 227 R---------ELTWEQNEDYLYAKLDQSRLLDTEGGREQGMKQFL-DDKSIKPGLQAY 274 (276)
T ss_dssp T---------TSCHHHHHHHHHHHHHHHHHHC--------------------------
T ss_pred h---------cCCHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHH-hcccCCCCcccC
Confidence 6 568999999888876654 6789 9999999999 674 69999874
No 38
>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3
Probab=100.00 E-value=3e-54 Score=427.62 Aligned_cols=262 Identities=19% Similarity=0.229 Sum_probs=219.5
Q ss_pred CCccceEEEEecCcEEEEEEc-CCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhc
Q 012534 63 GAEEFVKGNVHPNGVAVITLD-RPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKD 141 (461)
Q Consensus 63 ~~~~~i~~~~~~~~V~~ItLn-rP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~ 141 (461)
..++.|.++. +++|++|||| ||+++|+||.+|+.+|.++|+.++.|+. |+|||||.| ++||+|+|++++.......
T Consensus 20 ~~~~~v~~~~-~~~v~~itln~rp~~~Nal~~~m~~~L~~al~~~~~d~~-r~vVltg~G-~~FcaG~Dl~~~~~~~~~~ 96 (291)
T 2fbm_A 20 STYRDIVVKK-EDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDS-KLVLFSAAG-SVFCCGLDFGYFVKHLRNN 96 (291)
T ss_dssp -CCSSEEEEE-CSSEEEEEECCSSSSTTCBCHHHHHHHHHHHHHHHHSSC-SEEEEEECS-SCSBCCBCHHHHHHHHHHC
T ss_pred CCcceEEEEE-eCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHhcCCC-eEEEEECCC-CCccCCcCHHHHHhccccc
Confidence 4677888887 7899999999 7999999999999999999999999875 999999998 8999999999986422110
Q ss_pred CCCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEe
Q 012534 142 RNTPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLA 221 (461)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~ 221 (461)
. ......+......++..|.++||||||+|||+|+|||++|+++||||||+++++|+
T Consensus 97 ~-----------------------~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~ 153 (291)
T 2fbm_A 97 R-----------------------NTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQ 153 (291)
T ss_dssp H-----------------------HHHHHHHHHHHHHHHHHHHHCCSCEEEEECSCEETHHHHTGGGSSEEEEETTCEEE
T ss_pred c-----------------------hhHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeecHHHHHHHhCCEEEEeCCCEEE
Confidence 0 00111233445567788999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHH
Q 012534 222 MPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIV 301 (461)
Q Consensus 222 ~pe~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~ 301 (461)
+||+++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||+|||++++.+.+.
T Consensus 154 ~pe~~lGl~p~~g~~~~L~r~vG~~-~A~el~ltg~~i~-A~eA~~~GLV~~vv~~~~l~~~a~---------------- 215 (291)
T 2fbm_A 154 TPYTTFGQSPDGCSSITFPKMMGKA-SANEMLIAGRKLT-AREACAKGLVSQVFLTGTFTQEVM---------------- 215 (291)
T ss_dssp CCHHHHTCCCCTTHHHHHHHHHCHH-HHHHHHTSCCEEE-HHHHHHTTSCSEEECSTTSHHHHH----------------
T ss_pred CcHHhcCCCCcccHHHHHHHHHhHH-HHHHHHHcCCccC-HHHHHHCCCcceecChhHHHHHHH----------------
Confidence 9999999999999999999999997 9999999999999 999999999999999998875322
Q ss_pred HHHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 012534 302 ALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV 381 (461)
Q Consensus 302 ~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~ 381 (461)
++|+ +|+++||.+++.+|++++..
T Consensus 216 ----------------------------------------------------~~a~----~la~~~p~a~~~~K~~l~~~ 239 (291)
T 2fbm_A 216 ----------------------------------------------------IQIK----ELASYNPIVLEECKALVRCN 239 (291)
T ss_dssp ----------------------------------------------------HHHH----HHTTSCHHHHHHHHHHHHTT
T ss_pred ----------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHhh
Confidence 4444 79999999999999999976
Q ss_pred hhhcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhh-hcCCCCCCCCCCC
Q 012534 382 ASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAV-LVDKDQNPKWNPA 435 (461)
Q Consensus 382 ~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~af-l~~K~r~P~w~~~ 435 (461)
. ..+++++++.|.+.+..++.++|++||+++| + +| |+|+|+++
T Consensus 240 ~---------~~~l~~~l~~e~~~~~~~~~s~d~~eg~~Af~~-ek-R~P~f~~~ 283 (291)
T 2fbm_A 240 I---------KLELEQANERECEVLRKIWSSAQGIESMLKIPL-LG-YKAAFPPR 283 (291)
T ss_dssp T---------HHHHHHHHHHHHHHHHHHHTSHHHHHHHHTC--------------
T ss_pred h---------ccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh-cC-CCCCCCCC
Confidence 5 3478999999999999999999999999999 9 77 89999986
No 39
>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} SCOP: c.14.1.0 PDB: 3q1t_A
Probab=100.00 E-value=1.5e-54 Score=426.11 Aligned_cols=261 Identities=18% Similarity=0.229 Sum_probs=220.6
Q ss_pred CCccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcC
Q 012534 63 GAEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDR 142 (461)
Q Consensus 63 ~~~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~ 142 (461)
..++.|.++.++++|++||||||+ +|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.......
T Consensus 10 ~~~~~v~~~~~~~~v~~itlnrp~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~- 86 (272)
T 3qk8_A 10 QDFPSLRFEPGEHGVLNLVLDSPG-LNSVGPQMHRDLADVWPVIDRDPDVRVVLVRGEG-KAFSSGGSFELIDETIGDY- 86 (272)
T ss_dssp GGCTTEEEEECSTTEEEEEECCHH-HHEECHHHHHHHHHHHHHHHHCTTCSEEEEEESS-SCSBCEECHHHHHHHHHCH-
T ss_pred CCCCeEEEEEeCCCEEEEEECCCC-cCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCC-CCeeCCcCHHHHhccccch-
Confidence 356789998844589999999999 9999999999999999999999999999999998 8999999999986532110
Q ss_pred CCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEec
Q 012534 143 NTPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 222 (461)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~ 222 (461)
.....++...+.++.+|.++||||||+|||+|+|||++|+++||||||+++++|++
T Consensus 87 ------------------------~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~ 142 (272)
T 3qk8_A 87 ------------------------EGRIRIMREARDLVLNLVNLDKPVVSAIRGPAVGAGLVVALLADISVASATAKIID 142 (272)
T ss_dssp ------------------------HHHHHHHHHHHHHHHHHHTCCSCEEEEECSEEEHHHHHHHHHSSEEEEETTCEEEC
T ss_pred ------------------------HHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEEC
Confidence 11223555667788899999999999999999999999999999999999999999
Q ss_pred cccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHH
Q 012534 223 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 302 (461)
Q Consensus 223 pe~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~ 302 (461)
||+++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||+|||++++.+.+.
T Consensus 143 pe~~~Gl~p~~g~~~~L~r~vG~~-~A~~l~ltg~~~~-A~eA~~~GLv~~vv~~~~l~~~a~----------------- 203 (272)
T 3qk8_A 143 GHTKLGVAAGDHAAICWPLLVGMA-KAKYYLLTCETLS-GEEAERIGLVSTCVDDDEVLPTAT----------------- 203 (272)
T ss_dssp CHHHHTSCSCSSHHHHTHHHHCHH-HHHHHHHHCCCEE-HHHHHHHTSSSEEECGGGHHHHHH-----------------
T ss_pred chhccCCCCCccHHHHHHHHhCHH-HHHHHHHcCCCCC-HHHHHHCCCCcEeeCHhHHHHHHH-----------------
Confidence 999999999999999999999998 9999999999999 999999999999999988764222
Q ss_pred HHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 012534 303 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 382 (461)
Q Consensus 303 ~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~ 382 (461)
++|+ +|+++||.+++.+|++++...
T Consensus 204 ---------------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~~~ 228 (272)
T 3qk8_A 204 ---------------------------------------------------RLAE----NLAQGAQNAIRWTKRSLNHWY 228 (272)
T ss_dssp ---------------------------------------------------HHHH----HHHTSCHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------------------HHHH----HHHcCCHHHHHHHHHHHHHHH
Confidence 3444 799999999999999999764
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCCC
Q 012534 383 SAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPAS 436 (461)
Q Consensus 383 ~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~~ 436 (461)
.. ....+++.++.| ..++.++|++||+++|+ +| |+|+|+++.
T Consensus 229 ~~------~~~~~~~~~~~e----~~~~~s~d~~eg~~Af~-ek-R~p~f~g~~ 270 (272)
T 3qk8_A 229 RM------FGPTFETSLGLE----FLGFTGPDVQEGLAAHR-QK-RPARFTDRT 270 (272)
T ss_dssp HH------THHHHHHHHHHH----HHHTTSSHHHHHHHHHH-TT-SCCCC----
T ss_pred hh------cchhHHHHHHHH----HHHhCCHHHHHHHHHHH-cC-CCCCCCCCC
Confidence 10 012344444444 46789999999999999 77 899999864
No 40
>4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP}
Probab=100.00 E-value=7.6e-55 Score=428.77 Aligned_cols=260 Identities=20% Similarity=0.206 Sum_probs=219.1
Q ss_pred CccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEe-----cCCCccccCCChhhHHHHh
Q 012534 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEG-----SGPRAFCAGMDIKGVVAEI 138 (461)
Q Consensus 64 ~~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg-----~G~~~FcaG~Dl~~~~~~~ 138 (461)
.++.|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+||||| .|+++||+|+|++++....
T Consensus 8 ~~~~v~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~~~~~G~~~F~aG~Dl~~~~~~~ 86 (275)
T 4eml_A 8 HYDDILYYK-AGGIAKIVINRPHKRNAFRPQTVFELYDAFCNAREDNRIGVVLLTGAGPHSDGKYAFCSGGDQSVRGEGG 86 (275)
T ss_dssp ECSSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTSCCEEECCBCCC------
T ss_pred CCceEEEEE-ECCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCCcCcCCCCceeCCcChhhhhccc
Confidence 467788987 7999999999999999999999999999999999999999999999 8867999999999986411
Q ss_pred hhcCCCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCc
Q 012534 139 QKDRNTPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKT 218 (461)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a 218 (461)
...... ......+.++..|.++||||||+|||+|+|||++|+++||||||++++
T Consensus 87 ~~~~~~--------------------------~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a 140 (275)
T 4eml_A 87 YIDDQG--------------------------TPRLNVLDLQRLIRSMPKVVIALVAGYAIGGGHVLHLVCDLTIAADNA 140 (275)
T ss_dssp ----------------------------------CCCHHHHHHHHHHSSSEEEEEECSEEETHHHHHHHHSSEEEEETTC
T ss_pred ccchhh--------------------------HHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCC
Confidence 100000 000112456778999999999999999999999999999999999999
Q ss_pred eEeccccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHH
Q 012534 219 LLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQ 298 (461)
Q Consensus 219 ~f~~pe~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~ 298 (461)
+|++||+++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||+|||++++.+.+.
T Consensus 141 ~f~~pe~~~Gl~p~~~g~~~L~r~vG~~-~A~~llltg~~i~-A~eA~~~GLv~~vv~~~~l~~~a~------------- 205 (275)
T 4eml_A 141 IFGQTGPKVGSFDGGFGSSYLARIVGQK-KAREIWYLCRQYS-AQEAERMGMVNTVVPVDRLEEEGI------------- 205 (275)
T ss_dssp EEECCHHHHTCCCCSTTTHHHHHHHCHH-HHHHHHHHCCCEE-HHHHHHHTSCSEEECGGGHHHHHH-------------
T ss_pred EEECcccccCCCCCccHHHHHHHHhHHH-HHHHHHHhCCCcC-HHHHHHcCCccEeeCHHHHHHHHH-------------
Confidence 9999999999999988899999999998 9999999999999 999999999999999988764322
Q ss_pred HHHHHHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHH
Q 012534 299 DIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYF 378 (461)
Q Consensus 299 ~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l 378 (461)
++|+ +|+++||.+++.+|+++
T Consensus 206 -------------------------------------------------------~~a~----~la~~~~~a~~~~K~~l 226 (275)
T 4eml_A 206 -------------------------------------------------------QWAK----EILSKSPLAIRCLKAAF 226 (275)
T ss_dssp -------------------------------------------------------HHHH----HHHTSCHHHHHHHHHHH
T ss_pred -------------------------------------------------------HHHH----HHHhCCHHHHHHHHHHH
Confidence 4444 79999999999999999
Q ss_pred HHHhhhcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCCC
Q 012534 379 SKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPAS 436 (461)
Q Consensus 379 ~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~~ 436 (461)
+... ....+..+.|.+.+..++.++|++||++||+ +| |+|+|++..
T Consensus 227 ~~~~----------~~~~~~~~~~~~~~~~~~~s~d~~eg~~AF~-ek-R~p~f~~~~ 272 (275)
T 4eml_A 227 NADC----------DGQAGLQELAGNATLLYYMTEEGSEGKQAFL-EK-RPPDFSQYP 272 (275)
T ss_dssp HHTT----------SHHHHHHHHHHHHHHHHHTSHHHHHHHHHHH-TT-SCCCCTTCC
T ss_pred Hhhh----------ccchhHHHHHHHHHHHHhcCHHHHHHHHHHH-cC-CCCCCCCCC
Confidence 9754 1244555677777778899999999999999 78 899999854
No 41
>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 4elx_A 4elw_A 4els_A 3h02_A 2iex_A
Probab=100.00 E-value=1.5e-54 Score=429.35 Aligned_cols=264 Identities=18% Similarity=0.207 Sum_probs=220.5
Q ss_pred cCCccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhc
Q 012534 62 AGAEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKD 141 (461)
Q Consensus 62 ~~~~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~ 141 (461)
.+.++.|+++.+.++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|+++||+|+|++++.......
T Consensus 23 ~~~~~~v~~~~~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~ 102 (289)
T 3t89_A 23 SEGFEDIRYEKSTDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYK 102 (289)
T ss_dssp CTTCSSEEEEEETTSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCCC---------
T ss_pred CCCCCeEEEEEecCCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCCccCCCChhhhhccccch
Confidence 35678899988338999999999999999999999999999999999999999999999866999999999875421100
Q ss_pred CCCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEe
Q 012534 142 RNTPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLA 221 (461)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~ 221 (461)
.. ........+.++..|.++||||||+|||+|+|||++|+++|||||++++++|+
T Consensus 103 ~~-------------------------~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~a~f~ 157 (289)
T 3t89_A 103 DD-------------------------SGVHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFG 157 (289)
T ss_dssp --------------------------------CTHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEE
T ss_pred hh-------------------------hHHHHHHHHHHHHHHHcCCCCEEEEECCEeehHHHHHHHhCCEEEEeCCCEEe
Confidence 00 00011123457778999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHH
Q 012534 222 MPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIV 301 (461)
Q Consensus 222 ~pe~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~ 301 (461)
+||+++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||+|||++++.+.+.
T Consensus 158 ~pe~~~Gl~~~~~g~~~L~r~vG~~-~A~~llltG~~i~-A~eA~~~GLV~~vv~~~~l~~~a~---------------- 219 (289)
T 3t89_A 158 QTGPKVGSFDGGWGASYMARIVGQK-KAREIWFLCRQYD-AKQALDMGLVNTVVPLADLEKETV---------------- 219 (289)
T ss_dssp CCHHHHTCCCCSTTTHHHHHHHCHH-HHHHHHHHCCCEE-HHHHHHHTSSSEEECGGGHHHHHH----------------
T ss_pred ccccccCCCCCchHHHHHHHhcCHH-HHHHHHHcCCccc-HHHHHHCCCceEeeCHHHHHHHHH----------------
Confidence 9999999888888899999999998 9999999999999 999999999999999988764322
Q ss_pred HHHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 012534 302 ALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV 381 (461)
Q Consensus 302 ~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~ 381 (461)
++|+ +|+.+||.+++.+|++++..
T Consensus 220 ----------------------------------------------------~~A~----~la~~~~~a~~~~K~~l~~~ 243 (289)
T 3t89_A 220 ----------------------------------------------------RWCR----EMLQNSPMALRCLKAALNAD 243 (289)
T ss_dssp ----------------------------------------------------HHHH----HHHTSCHHHHHHHHHHHHHT
T ss_pred ----------------------------------------------------HHHH----HHHcCCHHHHHHHHHHHHhh
Confidence 3444 79999999999999999976
Q ss_pred hhhcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCCC
Q 012534 382 ASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPAS 436 (461)
Q Consensus 382 ~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~~ 436 (461)
. . ...+..+.|.+.+..++.++|++||+++|+ +| |+|+|++..
T Consensus 244 ~---------~-~~~~~~~~e~~~~~~~~~s~d~~Eg~~AF~-ek-R~P~f~~~~ 286 (289)
T 3t89_A 244 C---------D-GQAGLQELAGNATMLFYMTEEGQEGRNAFN-QK-RQPDFSKFK 286 (289)
T ss_dssp T---------S-HHHHHHHHHHHHHHHHTTSSTTTHHHHHHH-TT-SCCCCTTSC
T ss_pred c---------c-cchHHHHHHHHHHHHHhcCHHHHHHHHHHh-cC-CCCCCCCCC
Confidence 4 1 234455677777788899999999999999 78 899999764
No 42
>3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A
Probab=100.00 E-value=5.2e-55 Score=427.10 Aligned_cols=252 Identities=18% Similarity=0.184 Sum_probs=203.2
Q ss_pred ccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCC
Q 012534 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNT 144 (461)
Q Consensus 65 ~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~ 144 (461)
++.|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++..........
T Consensus 10 m~~v~~~~-~~~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~~~ 87 (262)
T 3r9q_A 10 QPAVRVEK-AGPVTTVILNRPHARNAVDGPTAAALLAAFTEFDADPEASVAVLWGDN-GTFCAGADLKAMGTDRGNELHP 87 (262)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEST-TCSBCCBCTTTTTSTTSCCCCT
T ss_pred CCEEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CCccCCcCHHHHhccChhhHHH
Confidence 44588887 799999999999999999999999999999999999999999999998 8999999999976422110000
Q ss_pred CCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEeccc
Q 012534 145 PLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPE 224 (461)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe 224 (461)
. . ...+...+.++||||||+|||+|+|||++|+++|||||++++++|++||
T Consensus 88 ---~-----------------------~---~~~~~~~~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe 138 (262)
T 3r9q_A 88 ---H-----------------------G---PGPMGPSRLRLSKPVIAAISGHAVAGGIELALWCDLRVVEEDAVLGVFC 138 (262)
T ss_dssp ---T-----------------------S---SCTTSSTTCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECTH
T ss_pred ---h-----------------------h---hhHHHHHHHhCCCCEEEEECCeeehhhhHHHHhCCEEEEeCCCEEecch
Confidence 0 0 0012224568999999999999999999999999999999999999999
Q ss_pred cccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHHH
Q 012534 225 NGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALL 304 (461)
Q Consensus 225 ~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~l 304 (461)
+++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||+|||++++.+.+.
T Consensus 139 ~~~Gl~p~~g~~~~L~r~vG~~-~A~~l~ltG~~~~-A~eA~~~GLv~~vv~~~~l~~~a~------------------- 197 (262)
T 3r9q_A 139 RRWGVPLIDGGTIRLPRLIGHS-RAMDLILTGRPVH-ANEALDIGLVNRVVARGQAREAAE------------------- 197 (262)
T ss_dssp HHHTCCCCSSHHHHHHHHHCHH-HHHHHHHHCCCEE-HHHHHHTTSCSEEECTTCHHHHHH-------------------
T ss_pred hccCCCCCccHHHHHHHHhCHH-HHHHHHHcCCcCC-HHHHHHcCCccEecChhHHHHHHH-------------------
Confidence 9999999999999999999998 9999999999999 999999999999999999875322
Q ss_pred HhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhh
Q 012534 305 AKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASA 384 (461)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~~ 384 (461)
++|+ +|+++||.+++.+|++++...
T Consensus 198 -------------------------------------------------~~a~----~la~~~~~a~~~~K~~~~~~~-- 222 (262)
T 3r9q_A 198 -------------------------------------------------TLAA----EIAAFPQQCVRADRDSAIAQW-- 222 (262)
T ss_dssp -------------------------------------------------HHHH----HHHHSCHHHHHHHHHHHHHTT--
T ss_pred -------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHhhh--
Confidence 3444 799999999999999999876
Q ss_pred cCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCC
Q 012534 385 HGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 434 (461)
Q Consensus 385 ~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~ 434 (461)
..+++++++.|.+ +..++.+ |++||++||+ +| ++|.|++
T Consensus 223 -------~~~l~~~l~~e~~-~~~~~~s-d~~Eg~~AF~-ek-r~p~~~~ 261 (262)
T 3r9q_A 223 -------GMAEEAALDNEFG-SIERVAT-EALEGAGRFA-AG-EGRHGAG 261 (262)
T ss_dssp -------TSCHHHHHHHHHT-HHHHHHC----------------------
T ss_pred -------cCCHHHHHHHHHH-HHHHhcc-HHHHHHHHHH-cC-CCCCCCC
Confidence 5689999999999 8888888 9999999999 77 8999985
No 43
>3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum}
Probab=100.00 E-value=1e-54 Score=425.81 Aligned_cols=254 Identities=19% Similarity=0.290 Sum_probs=216.3
Q ss_pred CCccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcC
Q 012534 63 GAEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDR 142 (461)
Q Consensus 63 ~~~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~ 142 (461)
..++.|.+++ +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++........
T Consensus 12 ~~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~ 89 (265)
T 3qxi_A 12 DTEPEVLVEQ-RDRILIITINRPKAKNSVNAAVSRALADAMDRLDADAGLSVGILTGAG-GSFCAGMDLKAFARGENVVV 89 (265)
T ss_dssp ---CCEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEST-TCCCCSBC-------CCCEE
T ss_pred CCCCeEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCC-CCeeCCCChhhhhccchhhh
Confidence 3567788987 799999999999999999999999999999999999999999999998 79999999999864211000
Q ss_pred CCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEec
Q 012534 143 NTPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 222 (461)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~ 222 (461)
.. . .+ . +..+.. ||||||+|||+|+|||++|+++|||||++++++|++
T Consensus 90 ~~-------------------~------~~-----~-~~~~~~-~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~ 137 (265)
T 3qxi_A 90 EG-------------------R------GL-----G-FTERPP-AKPLIAAVEGYALAGGTELALATDLIVAARDSAFGI 137 (265)
T ss_dssp TT-------------------T------EE-----T-TTTSCC-SSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEEC
T ss_pred hh-------------------h------hh-----h-HHHhhC-CCCEEEEECCceeHHHHHHHHhCCEEEEcCCCEEEC
Confidence 00 0 00 0 122334 999999999999999999999999999999999999
Q ss_pred cccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHH
Q 012534 223 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 302 (461)
Q Consensus 223 pe~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~ 302 (461)
||+++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||++||++++.+.+.
T Consensus 138 pe~~~Gl~p~~g~~~~l~~~vG~~-~a~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a~----------------- 198 (265)
T 3qxi_A 138 PEVKRGLVAGGGGLLRLPERIPYA-IAMELALTGDNLS-AERAHALGMVNVLAEPGAALDAAI----------------- 198 (265)
T ss_dssp GGGGGTCCCCSSHHHHHHHHSCHH-HHHHHHHHCCCEE-HHHHHHTTSCSEEECTTCHHHHHH-----------------
T ss_pred cccccCcCCcccHHHHHHHHhCHH-HHHHHHHcCCCcC-HHHHHHCCCccEeeChhHHHHHHH-----------------
Confidence 999999999999999999999998 9999999999999 999999999999999998874322
Q ss_pred HHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 012534 303 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 382 (461)
Q Consensus 303 ~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~ 382 (461)
+||+ +|+++||.+++.+|++++...
T Consensus 199 ---------------------------------------------------~~a~----~la~~~p~a~~~~K~~l~~~~ 223 (265)
T 3qxi_A 199 ---------------------------------------------------ALAE----KITANGPLAVAATKRIITESR 223 (265)
T ss_dssp ---------------------------------------------------HHHH----HHHTSCHHHHHHHHHHHHHHT
T ss_pred ---------------------------------------------------HHHH----HHHcCCHHHHHHHHHHHHhhh
Confidence 4444 799999999999999999876
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCC
Q 012534 383 SAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 435 (461)
Q Consensus 383 ~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~ 435 (461)
..+++++++.|...+..++.++|++||+++|+ +| |+|+|+++
T Consensus 224 ---------~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~-ek-r~p~f~g~ 265 (265)
T 3qxi_A 224 ---------GWSLDTRFAQQMKILFPIFTSNDAKEGAIAFA-EK-RPPRWTGT 265 (265)
T ss_dssp ---------TCCTTTHHHHHHHHHHHHHHCHHHHHHHHHHH-TT-SCCCCCCC
T ss_pred ---------cCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHH-cC-CCCCCCCC
Confidence 56899999999999999999999999999999 77 89999874
No 44
>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis}
Probab=100.00 E-value=5e-55 Score=432.40 Aligned_cols=262 Identities=16% Similarity=0.119 Sum_probs=224.5
Q ss_pred CCccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhh--
Q 012534 63 GAEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQK-- 140 (461)
Q Consensus 63 ~~~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~-- 140 (461)
..++.|.++. +++|++||||||+ +|+||.+|+.+|.++++.++.|+++|+|||||.|+++||+|+|++++......
T Consensus 6 ~~~~~i~~~~-~~~va~itlnrP~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~~~~~ 83 (287)
T 3gkb_A 6 DAYSTLRVSS-EHGVARIILDNPP-VNVIGATMMRELRTVLTTLADDSSVRVIVFSSADPEFFLAHVDMRIGEKMDALQE 83 (287)
T ss_dssp -CCSSEEEEE-ETTEEEEEECCTT-TTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCTTGGGSHHHHHH
T ss_pred CCCCeEEEEE-ECCEEEEEECCCC-CCCCCHHHHHHHHHHHHHHHcCCCeeEEEEecCCCCceeCCcCHHHHhhccccch
Confidence 3577899987 7999999999999 79999999999999999999999999999999987899999999987532110
Q ss_pred --cCCCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcC-C
Q 012534 141 --DRNTPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTE-K 217 (461)
Q Consensus 141 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e-~ 217 (461)
.... .++..++.++.+|.++||||||+|||+|+|||++|+++|||||+++ +
T Consensus 84 ~~~~~~--------------------------~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~~ 137 (287)
T 3gkb_A 84 LAASAP--------------------------ADVNVFQAVGELIRHQPQVTIVKLAGKARGGGAEFVAAADMAFAAAET 137 (287)
T ss_dssp HHHTSC--------------------------TTCCTTHHHHHHHHHCSSEEEEEECSEEETHHHHHHHHSSEEEEETTT
T ss_pred hhHHHH--------------------------HHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEEeCCC
Confidence 0000 0122234577789999999999999999999999999999999999 9
Q ss_pred ceEeccccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChH
Q 012534 218 TLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPH 297 (461)
Q Consensus 218 a~f~~pe~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~ 297 (461)
++|++||+++|++|++|++++|++++|.. +|++|++||+.|+ |+||+++||||+|||++++.+.+.
T Consensus 138 a~f~~pe~~lGl~p~~g~~~~L~r~vG~~-~A~ellltG~~i~-A~eA~~~GLV~~vv~~~~l~~~a~------------ 203 (287)
T 3gkb_A 138 AGLGQIEALMGIIPGGGGTQYLRGRVGRN-RALEVVLTADLFD-AETAASYGWINRALPADELDEYVD------------ 203 (287)
T ss_dssp CEEECGGGGGTSCCCSSHHHHHHHHHCHH-HHHHHHHHCCCEE-HHHHHHHTSSSEEECHHHHHHHHH------------
T ss_pred cEEECcccccCCCCCchHHHHHHHHhCHH-HHHHHHHcCCCCC-HHHHHHCCCCcEEeChhHHHHHHH------------
Confidence 99999999999999999999999999998 9999999999999 999999999999999877653222
Q ss_pred HHHHHHHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHH
Q 012534 298 QDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKY 377 (461)
Q Consensus 298 ~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~ 377 (461)
++| ++|+++||.+++.+|++
T Consensus 204 --------------------------------------------------------~lA----~~la~~~p~a~~~~K~~ 223 (287)
T 3gkb_A 204 --------------------------------------------------------RVA----RNIAALPDGVIEAAKRS 223 (287)
T ss_dssp --------------------------------------------------------HHH----HHHHTSCTTHHHHHHHH
T ss_pred --------------------------------------------------------HHH----HHHHcCCHHHHHHHHHH
Confidence 344 37999999999999999
Q ss_pred HHHHhhhcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCCCccC
Q 012534 378 FSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEE 439 (461)
Q Consensus 378 l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~~~~~ 439 (461)
++.. .+.++++.|...+..++.++|++||+++|++.+++.|+|+. ++.+
T Consensus 224 l~~~------------~~~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekr~~~P~f~~-~l~~ 272 (287)
T 3gkb_A 224 LPAD------------DLKEGLLGENDAWAATFSLPAAQQLISGGLKDGAQTPAGER-DLEG 272 (287)
T ss_dssp SCCC------------CCHHHHHHHHHHHHHHHTSHHHHHHHHHHHHTTTTSHHHHH-THHH
T ss_pred HHcc------------CHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCchhh-hHHH
Confidence 9862 24589999999999999999999999999954334599994 4543
No 45
>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A*
Probab=100.00 E-value=1.9e-54 Score=422.89 Aligned_cols=256 Identities=24% Similarity=0.315 Sum_probs=223.0
Q ss_pred ccceEEEE--ecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcC
Q 012534 65 EEFVKGNV--HPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDR 142 (461)
Q Consensus 65 ~~~i~~~~--~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~ 142 (461)
|+.+.++. ..++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++......
T Consensus 3 ~~~~~~~~~v~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~-- 79 (260)
T 1mj3_A 3 FQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGE-KAFAAGADIKEMQNRTFQ-- 79 (260)
T ss_dssp CSSEEEEEESGGGCEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCS-SEEECCBCHHHHTTCCHH--
T ss_pred cccceeecccCcCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHHhCCCeeEEEEECCC-CCccCCcChHhhhcccch--
Confidence 55666664 2578999999999999999999999999999999999999999999998 899999999986421000
Q ss_pred CCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEec
Q 012534 143 NTPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 222 (461)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~ 222 (461)
..+...+...+.++.++||||||+|||+|+|||++|+++|||||++++++|++
T Consensus 80 ---------------------------~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~ 132 (260)
T 1mj3_A 80 ---------------------------DCYSGKFLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQ 132 (260)
T ss_dssp ---------------------------HHHHC--CCGGGGGGGCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEEC
T ss_pred ---------------------------HHHHHHHHHHHHHHHhCCCCEEEEECCEEEeHHHHHHHhCCEEEEcCCCEEeC
Confidence 00111112234578899999999999999999999999999999999999999
Q ss_pred cccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHH
Q 012534 223 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 302 (461)
Q Consensus 223 pe~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~ 302 (461)
||+++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||++||++++.+.+.
T Consensus 133 pe~~~Gl~p~~g~~~~l~r~vG~~-~a~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a~----------------- 193 (260)
T 1mj3_A 133 PEILLGTIPGAGGTQRLTRAVGKS-LAMEMVLTGDRIS-AQDAKQAGLVSKIFPVETLVEEAI----------------- 193 (260)
T ss_dssp GGGGGTCCCCSSTTTHHHHHHCHH-HHHHHHHHCCCEE-HHHHHHHTSCSEEECTTTHHHHHH-----------------
T ss_pred cccccCCCCCccHHHHHHHHhCHH-HHHHHHHcCCcCC-HHHHHHcCCccEEeChHHHHHHHH-----------------
Confidence 999999999999999999999997 9999999999999 999999999999999988864222
Q ss_pred HHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 012534 303 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 382 (461)
Q Consensus 303 ~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~ 382 (461)
++|+ +|+.+||.+++.+|++++...
T Consensus 194 ---------------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~~~ 218 (260)
T 1mj3_A 194 ---------------------------------------------------QCAE----KIANNSKIIVAMAKESVNAAF 218 (260)
T ss_dssp ---------------------------------------------------HHHH----HHHHSCHHHHHHHHHHHHGGG
T ss_pred ---------------------------------------------------HHHH----HHHcCCHHHHHHHHHHHHHhh
Confidence 3444 799999999999999999876
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCC
Q 012534 383 SAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 435 (461)
Q Consensus 383 ~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~ 435 (461)
..++.++++.|...+..++.++|++||+++|+ +| |+|+|+++
T Consensus 219 ---------~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~-~k-r~p~~~g~ 260 (260)
T 1mj3_A 219 ---------EMTLTEGNKLEKKLFYSTFATDDRREGMSAFV-EK-RKANFKDH 260 (260)
T ss_dssp ---------SSCHHHHHHHHHHHHHHGGGSHHHHHHHHHHH-TT-SCCCCCCC
T ss_pred ---------cCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHH-cC-CCCCCCCC
Confidence 56899999999999999999999999999999 77 89999863
No 46
>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0
Probab=100.00 E-value=1.7e-53 Score=417.72 Aligned_cols=257 Identities=23% Similarity=0.321 Sum_probs=219.3
Q ss_pred cceEEE----EecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhc
Q 012534 66 EFVKGN----VHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKD 141 (461)
Q Consensus 66 ~~i~~~----~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~ 141 (461)
+.+.++ . +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.......
T Consensus 7 ~~v~~~~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~ 84 (267)
T 3oc7_A 7 ALVDYAGPAAT-GGPVARLTLNSPHNRNALSTALVSQLHQGLRDASSDPAVRVVVLAHTG-GTFCAGADLSEAGSGGSPS 84 (267)
T ss_dssp SSEEEECHHHH-SSSEEEEEECCGGGTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECS-SEEECCBC-----------
T ss_pred cccCCCCccce-eCCEEEEEecCCCccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCC-CceeCCcCchhhhhccCch
Confidence 456666 4 789999999999999999999999999999999999999999999998 7999999999976211000
Q ss_pred CCCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEe
Q 012534 142 RNTPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLA 221 (461)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~ 221 (461)
........+....+.++.++.++||||||+|||+|+|||++|+++|||||++++++|+
T Consensus 85 ----------------------~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~ 142 (267)
T 3oc7_A 85 ----------------------SAYDMAVERAREMAALMRAIVESRLPVIAAIDGHVRAGGFGLVGACDIAVAGPRSSFA 142 (267)
T ss_dssp ----------------------CHHHHHHHHHHHHHHHHHHHHHCSSCEEEEECSEEETTHHHHHHHSSEEEECTTCEEE
T ss_pred ----------------------hhhhhHHHHHHHHHHHHHHHHhCCCCEEEEEcCeecccchHHHHHCCEEEEcCCCEEe
Confidence 0001122355666778889999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHH
Q 012534 222 MPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIV 301 (461)
Q Consensus 222 ~pe~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~ 301 (461)
+||+++|++|++|++++|+ ++|.. ++++|++||+.|+ |+||+++||||++ ++++.+.+.
T Consensus 143 ~pe~~~Gl~p~~g~~~~l~-~vG~~-~A~~l~ltg~~~~-a~eA~~~GLv~~v--~~~l~~~a~---------------- 201 (267)
T 3oc7_A 143 LTEARIGVAPAIISLTLLP-KLSAR-AAARYYLTGEKFD-ARRAEEIGLITMA--AEDLDAAID---------------- 201 (267)
T ss_dssp CCGGGGTCCCTTTHHHHTT-TSCHH-HHHHHHHHCCCBC-HHHHHHHTSSSEE--CSSHHHHHH----------------
T ss_pred CcccccCCCcchhHHHHHH-HhCHH-HHHHHHHcCCccC-HHHHHHCCChhhh--hHHHHHHHH----------------
Confidence 9999999999999999999 89998 9999999999999 9999999999999 677764222
Q ss_pred HHHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 012534 302 ALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV 381 (461)
Q Consensus 302 ~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~ 381 (461)
++|+ +|+++||.+++.+|++++..
T Consensus 202 ----------------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~~ 225 (267)
T 3oc7_A 202 ----------------------------------------------------QLVT----DVGRGSPQGLAASKALTTAA 225 (267)
T ss_dssp ----------------------------------------------------HHHH----HHHTSCHHHHHHHHHHHHHH
T ss_pred ----------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHHh
Confidence 3444 79999999999999999987
Q ss_pred hhhcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCC
Q 012534 382 ASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 434 (461)
Q Consensus 382 ~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~ 434 (461)
. ..+++++++.|...+..++.++|++||+++|+ +| |+|+|+.
T Consensus 226 ~---------~~~l~~~~~~e~~~~~~~~~s~d~~eg~~af~-ek-r~p~f~~ 267 (267)
T 3oc7_A 226 V---------LERFDRDAERLAEESARLFVSDEAREGMLAFL-EK-RSPNWTS 267 (267)
T ss_dssp H---------HHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHH-HT-CCCTTC-
T ss_pred h---------cCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHH-cC-CCCCCCC
Confidence 6 45799999999999999999999999999999 67 8999973
No 47
>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3
Probab=100.00 E-value=1.3e-53 Score=417.77 Aligned_cols=256 Identities=18% Similarity=0.209 Sum_probs=224.8
Q ss_pred ccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCC
Q 012534 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNT 144 (461)
Q Consensus 65 ~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~ 144 (461)
++.+.++.++++|++||||||+ +|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++ +.......
T Consensus 9 ~~~v~~~~~~~~v~~itlnrp~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~-~~~~~~~~--- 82 (264)
T 1wz8_A 9 YPGLAFAWPRPGVLEITFRGEK-LNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEG-GVFSAGGSFG-LIEEMRAS--- 82 (264)
T ss_dssp CTTEEEEEEETTEEEEEECCSG-GGCBCHHHHHHHHHHHHHHTTCTTCSEEEEEEGG-GCCBCCBCHH-HHHHHHHC---
T ss_pred CCeEEEEEccCCEEEEEeCCCC-cCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCC-CCCcccCccc-cccccccc---
Confidence 4567777535899999999999 9999999999999999999999999999999998 8999999999 75421100
Q ss_pred CCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEeccc
Q 012534 145 PLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPE 224 (461)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe 224 (461)
......++...+.++.+|.++||||||+|||+|+|||++|+++|||||++++++|++||
T Consensus 83 ---------------------~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe 141 (264)
T 1wz8_A 83 ---------------------HEALLRVFWEARDLVLGPLNFPRPVVAAVEKVAVGAGLALALAADIAVVGKGTRLLDGH 141 (264)
T ss_dssp ---------------------HHHHHHHHHHHHHHHHHHHHSSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCH
T ss_pred ---------------------hHHHHHHHHHHHHHHHHHHcCCCCEEEEECCeeechhHHHHHhCCEEEecCCCEEeCch
Confidence 00011244455678889999999999999999999999999999999999999999999
Q ss_pred cccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHHH
Q 012534 225 NGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALL 304 (461)
Q Consensus 225 ~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~l 304 (461)
+++|++|++|++++|++++|.. ++++|++||+.++ |+||+++||||++||++++.+.+.
T Consensus 142 ~~~Gl~p~~g~~~~l~r~vG~~-~a~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a~------------------- 200 (264)
T 1wz8_A 142 LRLGVAAGDHAVLLWPLLVGMA-KAKYHLLLNEPLT-GEEAERLGLVALAVEDEKVYEKAL------------------- 200 (264)
T ss_dssp HHHTSCCTTTHHHHTHHHHCHH-HHHHHHHHTCCEE-HHHHHHHTSSSEEECGGGHHHHHH-------------------
T ss_pred hhcCcCCCccHHHHHHHHhCHH-HHHHHHHcCCCCC-HHHHHHCCCceeecChhHHHHHHH-------------------
Confidence 9999999999999999999997 9999999999999 999999999999999888764322
Q ss_pred HhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhh
Q 012534 305 AKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASA 384 (461)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~~ 384 (461)
++|+ +|+++||.+++.+|++++...
T Consensus 201 -------------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~~~-- 225 (264)
T 1wz8_A 201 -------------------------------------------------EVAE----RLAQGPKEALHHTKHALNHWY-- 225 (264)
T ss_dssp -------------------------------------------------HHHH----HHHTSCHHHHHHHHHHHHHHH--
T ss_pred -------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHHHH--
Confidence 4444 799999999999999999876
Q ss_pred cCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCC
Q 012534 385 HGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWN 433 (461)
Q Consensus 385 ~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~ 433 (461)
.. +++.++.|...+..++.++|++||+++|+ +| |+|+|+
T Consensus 226 -------~~-~~~~l~~e~~~~~~~~~s~d~~eg~~af~-ek-r~p~f~ 264 (264)
T 1wz8_A 226 -------RS-FLPHFELSLALEFLGFSGKELEEGLKALK-EK-RPPEFP 264 (264)
T ss_dssp -------HT-THHHHHHHHHHHHHGGGSHHHHHHHHHHH-TT-SCCCCC
T ss_pred -------HH-HHHHHHHHHHHHHHHhcChHHHHHHHHHH-cc-CCCCCC
Confidence 45 88999999999999999999999999999 77 899995
No 48
>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3
Probab=100.00 E-value=2e-53 Score=414.05 Aligned_cols=252 Identities=25% Similarity=0.356 Sum_probs=221.3
Q ss_pred eEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCCC
Q 012534 68 VKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLV 147 (461)
Q Consensus 68 i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~ 147 (461)
|.++ +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++........
T Consensus 2 i~~~--~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~----- 73 (253)
T 1uiy_A 2 VQVE--KGHVAVVFLNDPERRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRG-KAFSAGADLAFLERVTELGA----- 73 (253)
T ss_dssp EEEE--CSSEEEEEECCGGGTCCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESS-SCSBCCCCHHHHHHHTTSCH-----
T ss_pred EEEE--eCCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CCcccCcChHHHHhcccCCc-----
Confidence 4455 588999999999999999999999999999999999999999999998 89999999999864210000
Q ss_pred CCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEecccccc
Q 012534 148 PKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGI 227 (461)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~l 227 (461)
.... ......+.++.+|.++||||||+|||+|+|||++|+++|||||++++++|++||+++
T Consensus 74 ------------------~~~~-~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~ 134 (253)
T 1uiy_A 74 ------------------EENY-RHSLSLMRLFHRVYTYPKPTVAAVNGPAVAGGAGLALACDLVVMDEEARLGYTEVKI 134 (253)
T ss_dssp ------------------HHHH-HHHHHHHHHHHHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCHHHH
T ss_pred ------------------hhHH-HHHHHHHHHHHHHHhCCCCEEEEECCeeeHHHHHHHHhCCEEEEcCCcEEeCccccc
Confidence 0000 111114667888999999999999999999999999999999999999999999999
Q ss_pred CCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHHHHhh
Q 012534 228 GLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKY 307 (461)
Q Consensus 228 Gl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~l~~~ 307 (461)
|++|++| +++|++++|.. ++++|++||+.++ |+||+++||||++||++++.+.+.
T Consensus 135 Gl~p~~g-~~~l~r~vG~~-~a~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a~---------------------- 189 (253)
T 1uiy_A 135 GFVAALV-SVILVRAVGEK-AAKDLLLTGRLVE-AREAKALGLVNRIAPPGKALEEAK---------------------- 189 (253)
T ss_dssp TCCCHHH-HHHHHHHSCHH-HHHHHHHHCCEEE-HHHHHHHTSCSEEECTTCHHHHHH----------------------
T ss_pred CcCCchH-HHHHHHHhCHH-HHHHHHHhCCccC-HHHHHHCCCcceecChhHHHHHHH----------------------
Confidence 9999999 99999999997 9999999999999 999999999999999988875322
Q ss_pred cCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhcCC
Q 012534 308 SSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGK 387 (461)
Q Consensus 308 ~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~ 387 (461)
+||+ +|+++||.+++.+|++++...
T Consensus 190 ----------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~~~----- 214 (253)
T 1uiy_A 190 ----------------------------------------------ALAE----EVAKNAPTSLRLTKELLLALP----- 214 (253)
T ss_dssp ----------------------------------------------HHHH----HHHHSCHHHHHHHHHHHHHGG-----
T ss_pred ----------------------------------------------HHHH----HHHcCCHHHHHHHHHHHHhhh-----
Confidence 4444 788999999999999999876
Q ss_pred CccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCC
Q 012534 388 TDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKW 432 (461)
Q Consensus 388 ~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w 432 (461)
..++.++++.|.+.+..++.++|++||+++|+ +| |+|+|
T Consensus 215 ----~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~-~k-r~p~~ 253 (253)
T 1uiy_A 215 ----GMGLEDGFRLAALANAWVRETGDLAEGIRAFF-EK-RPPRF 253 (253)
T ss_dssp ----GSCHHHHHHHHHHHHHHGGGCHHHHHHHHHHH-TT-SCCCC
T ss_pred ----cCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHh-Cc-CCCCC
Confidence 56899999999999999999999999999999 67 89998
No 49
>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum}
Probab=100.00 E-value=3.3e-54 Score=420.24 Aligned_cols=251 Identities=24% Similarity=0.274 Sum_probs=187.6
Q ss_pred CccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCC
Q 012534 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRN 143 (461)
Q Consensus 64 ~~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~ 143 (461)
.+..|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.........
T Consensus 4 ~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~~ 81 (256)
T 3qmj_A 4 SMVTLQIDD-DNRVRTLTLNRPEALNAFNEALYDATAQALLDAADDPQVAVVLLTGSG-RGFSAGTDLAEMQARITDPNF 81 (256)
T ss_dssp --CCEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEST-TEEECCBCHHHHHHHHHSSSC
T ss_pred CcceEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CCcccCcCHHHHhhcccchhH
Confidence 456688887 799999999999999999999999999999999999999999999998 899999999998764332210
Q ss_pred CCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEecc
Q 012534 144 TPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMP 223 (461)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~p 223 (461)
.. +....+.++.+|.++||||||+|||+|+|||++|+++|||||++++++|++|
T Consensus 82 ~~--------------------------~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~p 135 (256)
T 3qmj_A 82 SE--------------------------GKFGFRGLIKALAGFPKPLICAVNGLGVGIGATILGYADLAFMSSTARLKCP 135 (256)
T ss_dssp CC--------------------------CSSHHHHHHHHHHHCCSCEEEEECSEEETHHHHGGGGCSEEEEETTCEEECC
T ss_pred HH--------------------------HHHHHHHHHHHHHhCCCCEEEEECCeehhHHHHHHHhCCEEEEeCCCEEECc
Confidence 10 1222356778899999999999999999999999999999999999999999
Q ss_pred ccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHH
Q 012534 224 ENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVAL 303 (461)
Q Consensus 224 e~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~ 303 (461)
|+++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||++||++++.+.+.
T Consensus 136 e~~~Gl~p~~g~~~~l~r~vG~~-~A~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a~------------------ 195 (256)
T 3qmj_A 136 FTSLGVAPEAASSYLLPQLVGRQ-NAAWLLMSSEWID-AEEALRMGLVWRICSPEELLPEAR------------------ 195 (256)
T ss_dssp GGGC---CCTTHHHHHHHHHHHH-HHHHHHHSCCCEE-HHHHHHHTSSSEEECGGGHHHHHH------------------
T ss_pred ccccCCCCCccHHHHHHHHhCHH-HHHHHHHcCCCCC-HHHHHHCCCccEEeCHhHHHHHHH------------------
Confidence 99999999999999999999997 9999999999999 999999999999999888764322
Q ss_pred HHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 012534 304 LAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVAS 383 (461)
Q Consensus 304 l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~ 383 (461)
+||+ +|+++||.+++.+|++++...
T Consensus 196 --------------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~~~- 220 (256)
T 3qmj_A 196 --------------------------------------------------RHAE----ILAAKPISSLMAVKHTMVEPN- 220 (256)
T ss_dssp --------------------------------------------------HHHH----HHHTSCHHHHHHHHHHHHCC--
T ss_pred --------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHhhh-
Confidence 4444 799999999999999999865
Q ss_pred hcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCC
Q 012534 384 AHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDK 426 (461)
Q Consensus 384 ~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K 426 (461)
..+++++++.|...+..++.++|++||+++|+ +|
T Consensus 221 --------~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~-ek 254 (256)
T 3qmj_A 221 --------RAQIAAASARENAHFAELMGAQANAAALADFT-DR 254 (256)
T ss_dssp -------------------------------------------
T ss_pred --------cCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHH-cc
Confidence 45899999999999999999999999999999 66
No 50
>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A
Probab=100.00 E-value=6.1e-54 Score=419.47 Aligned_cols=258 Identities=19% Similarity=0.226 Sum_probs=223.9
Q ss_pred CccceEEEEecCcEEEEEEc-CCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcC
Q 012534 64 AEEFVKGNVHPNGVAVITLD-RPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDR 142 (461)
Q Consensus 64 ~~~~i~~~~~~~~V~~ItLn-rP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~ 142 (461)
.++.|.++. +++|++|||| ||+++|+||.+|+.+|.++++.++.|+. |+|||||.| ++||+|+|++++........
T Consensus 3 ~~~~i~~~~-~~~v~~itln~rp~~~Nal~~~~~~~L~~al~~~~~d~~-r~vvltg~g-~~F~aG~Dl~~~~~~~~~~~ 79 (261)
T 2gtr_A 3 RYRDIVVRK-QDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADDS-KLVLLSAVG-SVFCCGLDFIYFIRRLTDDR 79 (261)
T ss_dssp CCSSEEEEE-ETTEEEEEECCSSSSTTEECHHHHHHHHHHHHHHHHSSC-SCEEEEESS-SCSBCEECHHHHHHHHHHCH
T ss_pred ccceEEEEE-eCCEEEEEECCCCccCCCCCHHHHHHHHHHHHHHhcCCC-EEEEEecCC-CccccccCchhhhhccccch
Confidence 356688887 7899999999 6999999999999999999999999874 999999998 89999999999864221110
Q ss_pred CCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEec
Q 012534 143 NTPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 222 (461)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~ 222 (461)
......+....+.++..+.++||||||+|||+|+|||++|+++|||||++++++|++
T Consensus 80 -----------------------~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~ 136 (261)
T 2gtr_A 80 -----------------------KRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQT 136 (261)
T ss_dssp -----------------------HHHHHHHHHHHHHHHHHHHHCCSCEEEEECSCEETHHHHTGGGSSEEEEETTCEEEC
T ss_pred -----------------------hhHHHHHHHHHHHHHHHHHhCCCCEEEEECCeEeeHHHHHHHhCCEEEEcCCCEEeC
Confidence 001122334456677889999999999999999999999999999999999999999
Q ss_pred cccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHH
Q 012534 223 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 302 (461)
Q Consensus 223 pe~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~ 302 (461)
||+++|++|++|++++|++++|.. ++++|++||+.++ |+||+++||||++||++++.+.+.
T Consensus 137 pe~~~Gl~p~~g~~~~l~~~vG~~-~a~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a~----------------- 197 (261)
T 2gtr_A 137 PYTTFGQSPDGCSTVMFPKIMGGA-SANEMLLSGRKLT-AQEACGKGLVSQVFWPGTFTQEVM----------------- 197 (261)
T ss_dssp CTTTTTCCCCTTHHHHHHHHHCHH-HHHHHHHHCCCEE-HHHHHHTTSCSEEECGGGHHHHHH-----------------
T ss_pred chhccCCCccchHHHHHHHHcCHH-HHHHHHHcCCCCC-HHHHHHCCCcccccChhHHHHHHH-----------------
Confidence 999999999999999999999997 9999999999999 999999999999999888764222
Q ss_pred HHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 012534 303 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 382 (461)
Q Consensus 303 ~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~ 382 (461)
++|+ +|+++||.+++.+|++++...
T Consensus 198 ---------------------------------------------------~~a~----~la~~~p~a~~~~K~~l~~~~ 222 (261)
T 2gtr_A 198 ---------------------------------------------------VRIK----ELASCNPVVLEESKALVRCNM 222 (261)
T ss_dssp ---------------------------------------------------HHHH----HHHTSCHHHHHHHHHHHHTTT
T ss_pred ---------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHhcc
Confidence 4444 789999999999999999765
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCC
Q 012534 383 SAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKW 432 (461)
Q Consensus 383 ~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w 432 (461)
..++++.++.|...+..++.++|++||+++|+ +| |+|+|
T Consensus 223 ---------~~~~~~~~~~e~~~~~~~~~s~d~~eg~~af~-ek-r~P~f 261 (261)
T 2gtr_A 223 ---------KMELEQANERECEVLKKIWGSAQGMDSMLKYL-QR-KIDEF 261 (261)
T ss_dssp ---------HHHHHHHHHHHHHHHHHHHHSTTTTHHHHHHH-HH-HHHC-
T ss_pred ---------ccCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-cc-CCCCC
Confidence 34689999999999999999999999999999 67 89998
No 51
>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus}
Probab=100.00 E-value=1.1e-53 Score=420.11 Aligned_cols=258 Identities=19% Similarity=0.212 Sum_probs=220.6
Q ss_pred CccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCC-ccccCCChhhHHHHhhhcC
Q 012534 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPR-AFCAGMDIKGVVAEIQKDR 142 (461)
Q Consensus 64 ~~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~-~FcaG~Dl~~~~~~~~~~~ 142 (461)
.++.|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| + +||+|+|++++.... ...
T Consensus 11 ~~~~i~~~~-~~~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~~FcaG~Dl~~~~~~~-~~~ 87 (273)
T 2uzf_A 11 EYDEIKYEF-YEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEG-DLAFCSGGDQKKRGHGG-YVG 87 (273)
T ss_dssp CCSSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESS-SEEEECCCCCC---------C
T ss_pred CCceEEEEE-ECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEecCC-CCceecCcCcHhhhccc-cch
Confidence 356688887 689999999999999999999999999999999999999999999998 6 999999999875411 000
Q ss_pred CCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEec
Q 012534 143 NTPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 222 (461)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~ 222 (461)
..... ....+.++..|.++||||||+|||+|+|||++|+++|||||++++++|++
T Consensus 88 -~~~~~------------------------~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~ 142 (273)
T 2uzf_A 88 -EDQIP------------------------RLNVLDLQRLIRIIPKPVIAMVKGYAVGGGNVLNVVCDLTIAADNAIFGQ 142 (273)
T ss_dssp -CSSSC------------------------CCTHHHHHHHHHHSSSCEEEEECEEEETHHHHHHHHSSEEEEETTCEEEC
T ss_pred -hhhHH------------------------HhhHHHHHHHHHhCCCCEEEEECCEEeehhHHHHHhCCEEEEcCCCEEEC
Confidence 00000 00023456678899999999999999999999999999999999999999
Q ss_pred cccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHH
Q 012534 223 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 302 (461)
Q Consensus 223 pe~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~ 302 (461)
||+++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||++||++++.+.+.
T Consensus 143 pe~~~Gl~p~~g~~~~l~~~vG~~-~A~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a~----------------- 203 (273)
T 2uzf_A 143 TGPKVGSFDAGYGSGYLARIVGHK-KAREIWYLCRQYN-AQEALDMGLVNTVVPLEKVEDETV----------------- 203 (273)
T ss_dssp CGGGTTCCCCSTTTHHHHHHHCHH-HHHHHHHTCCCEE-HHHHHHHTSSSEEECGGGSHHHHH-----------------
T ss_pred chhhhCCCCchhHHHHHHHHhCHH-HHHHHHHhCCCCC-HHHHHHcCCCccccCHHHHHHHHH-----------------
Confidence 999999999999999999999998 9999999999999 999999999999999888764222
Q ss_pred HHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 012534 303 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 382 (461)
Q Consensus 303 ~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~ 382 (461)
+||+ +|+++||.+++.+|++++..
T Consensus 204 ---------------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~~- 227 (273)
T 2uzf_A 204 ---------------------------------------------------QWCK----EIMKHSPTALRFLKAAMNAD- 227 (273)
T ss_dssp ---------------------------------------------------HHHH----HHTTSCHHHHHHHHHHHHHH-
T ss_pred ---------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHcc-
Confidence 4444 79999999999999999942
Q ss_pred hhcCCCccccCCHHHHHHHHH-HHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCCC
Q 012534 383 SAHGKTDNELSKLSGVMKYEY-RVALRSSLRSDFAEGVRAVLVDKDQNPKWNPAS 436 (461)
Q Consensus 383 ~~~~~~~~~~~~l~~~l~~E~-~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~~ 436 (461)
.++.++++.|. ..+..++.++|++||+++|+ +| |+|+|+++.
T Consensus 228 ----------~~~~~~l~~e~~~~~~~~~~s~d~~egi~af~-ek-r~p~f~~~~ 270 (273)
T 2uzf_A 228 ----------TDGLAGLQQMAGDATLLYYTTDEAKEGRDAFK-EK-RDPDFDQFP 270 (273)
T ss_dssp ----------HSHHHHHHHHHHHHHHHHHTSHHHHHHHHHHH-TT-SCCCCSSSC
T ss_pred ----------CCHHHHHHHHHHHHHHHHhcChHHHHHHHHHH-hc-CCCCCCCCC
Confidence 36889999999 88888999999999999999 67 899999863
No 52
>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A
Probab=100.00 E-value=2.8e-54 Score=434.71 Aligned_cols=271 Identities=18% Similarity=0.211 Sum_probs=190.0
Q ss_pred CccceEEEEe-cCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCC------ccccCCChhhHHH
Q 012534 64 AEEFVKGNVH-PNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPR------AFCAGMDIKGVVA 136 (461)
Q Consensus 64 ~~~~i~~~~~-~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~------~FcaG~Dl~~~~~ 136 (461)
.++.|++++. +++|++||||||+++|+||.+|+.+|.++|+.++.|++||+|||||.|++ +||+|+|++++..
T Consensus 53 ~~~~i~~~~~~~~gVa~ItlnrP~~~NAl~~~~~~eL~~al~~~~~d~~vrvVVltG~G~~~~~~~~~FcaG~Dl~~~~~ 132 (334)
T 3t8b_A 53 DLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGR 132 (334)
T ss_dssp TCSSEEEEEESSSSEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTTCCCEEECCSCTTTTC-
T ss_pred CCceEEEEEeccCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCCCCcCCCCCcccCCCCHHHhhc
Confidence 4778999873 48999999999999999999999999999999999999999999999854 9999999998643
Q ss_pred HhhhcCCCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEc-
Q 012534 137 EIQKDRNTPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVT- 215 (461)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~- 215 (461)
.......... ................++..|.++||||||+|||+|+|||++|+++||||||+
T Consensus 133 ~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~A~GgG~~LalacD~riAs~ 196 (334)
T 3t8b_A 133 SGYQYASGDT----------------ADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASR 196 (334)
T ss_dssp -------------------------------------CCHHHHHHHHHHSSSEEEEEECSEEETHHHHHHHHSSEEEEET
T ss_pred cccccccccc----------------chhhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCccccCcchhHhhCCEEEEeC
Confidence 1100000000 00000000112223457778999999999999999999999999999999999
Q ss_pred CCceEeccccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCC
Q 012534 216 EKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSED 295 (461)
Q Consensus 216 e~a~f~~pe~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~ 295 (461)
++++|++||+++|++|++|++++|++++|.. +|++|++||+.|+ |+||+++||||+|||++++.+.+.
T Consensus 197 ~~A~f~~pe~~lGl~p~~gg~~~L~r~vG~~-~A~ellltG~~i~-A~eA~~~GLV~~vv~~~~l~~~a~---------- 264 (334)
T 3t8b_A 197 EYARFKQTDADVGSFDGGYGSAYLARQVGQK-FAREIFFLGRTYT-AEQMHQMGAVNAVAEHAELETVGL---------- 264 (334)
T ss_dssp TTCEEECCCTTCSSSSCCSCHHHHHHHHHHH-HHHHHHHHCCEEE-HHHHHHHTSCSEEECGGGHHHHHH----------
T ss_pred CCcEEECcccccCCCCcccHHHHHHHHhhHH-HHHHHHHhCCcCC-HHHHHHCCCCcEecCHHHHHHHHH----------
Confidence 9999999999999999999999999999998 9999999999999 999999999999999988764322
Q ss_pred hHHHHHHHHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHH
Q 012534 296 PHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQ 375 (461)
Q Consensus 296 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk 375 (461)
+||+ +|+++||.+++.+|
T Consensus 265 ----------------------------------------------------------~~A~----~ia~~~p~a~~~~K 282 (334)
T 3t8b_A 265 ----------------------------------------------------------QWAA----EINAKSPQAQRMLK 282 (334)
T ss_dssp ----------------------------------------------------------HHHH----HHHTSCHHHHHHHH
T ss_pred ----------------------------------------------------------HHHH----HHHhCCHHHHHHHH
Confidence 4454 79999999999999
Q ss_pred HHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCCC
Q 012534 376 KYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPAS 436 (461)
Q Consensus 376 ~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~~ 436 (461)
++++... ..+.+.+..|.+.+..++.++|++||++||+ +| |+|+|++..
T Consensus 283 ~~l~~~~----------~~~~~~~~~e~~~~~~~~~s~d~~Eg~~AFl-eK-R~P~f~~~~ 331 (334)
T 3t8b_A 283 FAFNLLD----------DGLVGQQLFAGEATRLAYMTDEAVEGRDAFL-QK-RPPDWSPFP 331 (334)
T ss_dssp HHHHHTC----------CCC-----------------------------------------
T ss_pred HHHHhhh----------cchHHHHHHHHHHHHHHhcCHHHHHHHHHHH-cC-CCCCCCCCC
Confidence 9999764 2345556677777788899999999999999 77 899998753
No 53
>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp}
Probab=100.00 E-value=1e-52 Score=413.72 Aligned_cols=248 Identities=19% Similarity=0.256 Sum_probs=222.1
Q ss_pred cceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCC
Q 012534 66 EFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTP 145 (461)
Q Consensus 66 ~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~ 145 (461)
+.|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++......
T Consensus 28 ~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~----- 100 (276)
T 3rrv_A 28 TEIDVRA-DGALRIITLNRPDSLNSVNDDLHVGLARLWQRLTDDPTARAAVITGAG-RAFSAGGDFGYLKELSAD----- 100 (276)
T ss_dssp TTEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEST-TCSBCCBCHHHHHHHHHC-----
T ss_pred CeEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CcccCCcCHHHHhhcccc-----
Confidence 4688877 799999999999999999999999999999999999999999999998 899999999998753211
Q ss_pred CCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEecccc
Q 012534 146 LVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPEN 225 (461)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe~ 225 (461)
......++...+.++.+|.++||||||+|||+|+|||++|+++|||||++++++|++||+
T Consensus 101 --------------------~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~ 160 (276)
T 3rrv_A 101 --------------------ADLRAKTIRDGREIVLGMARCRIPVVAAVNGPAVGLGCSLVALSDIVYIAENAYLADPHV 160 (276)
T ss_dssp --------------------HHHHHHHHHHHHHHHHHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCHH
T ss_pred --------------------hHHHHHHHHHHHHHHHHHHhCCCCEEEEECceeeHHHHHHHHHCCEEEEeCCCEEECchh
Confidence 011223555667788899999999999999999999999999999999999999999999
Q ss_pred ccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHHHH
Q 012534 226 GIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLA 305 (461)
Q Consensus 226 ~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~l~ 305 (461)
++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||++| +++.+.+.
T Consensus 161 ~~Gl~p~~g~~~~L~r~vG~~-~A~ellltG~~i~-A~eA~~~GLv~~vv--~~l~~~a~-------------------- 216 (276)
T 3rrv_A 161 QVGLVAADGGPLTWPLHISLL-LAKEYALTGTRIS-AQRAVELGLANHVA--DDPVAEAI-------------------- 216 (276)
T ss_dssp HHTCCCCSSHHHHGGGTSCHH-HHHHHHHHCCCEE-HHHHHHHTSCSEEE--SSHHHHHH--------------------
T ss_pred ccCcCCCccHHHHHHHHhCHH-HHHHHHHcCCCCC-HHHHHHcCCHHHHH--HHHHHHHH--------------------
Confidence 999999999999999999998 9999999999999 99999999999999 77764222
Q ss_pred hhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhc
Q 012534 306 KYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAH 385 (461)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~~~ 385 (461)
+||+ +|+++||.+++.+|++++...
T Consensus 217 ------------------------------------------------~~A~----~la~~~~~a~~~~K~~l~~~~--- 241 (276)
T 3rrv_A 217 ------------------------------------------------ACAK----KILELPQQAVESTKRVLNIHL--- 241 (276)
T ss_dssp ------------------------------------------------HHHH----HHHHSCHHHHHHHHHHHHHHH---
T ss_pred ------------------------------------------------HHHH----HHHcCCHHHHHHHHHHHHHhh---
Confidence 4444 799999999999999999876
Q ss_pred CCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCC
Q 012534 386 GKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDK 426 (461)
Q Consensus 386 ~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K 426 (461)
..++.++++.|...+..++.++|++||+++|+ +|
T Consensus 242 ------~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~-ek 275 (276)
T 3rrv_A 242 ------ERAVLASLDYALSAESQSFVTEDFRSIVTKLA-DK 275 (276)
T ss_dssp ------HHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHH-CC
T ss_pred ------hcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-cC
Confidence 45689999999999999999999999999999 66
No 54
>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8e-54 Score=418.65 Aligned_cols=248 Identities=19% Similarity=0.304 Sum_probs=212.9
Q ss_pred cCCccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhc
Q 012534 62 AGAEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKD 141 (461)
Q Consensus 62 ~~~~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~ 141 (461)
..+++.|.++. +++|++||||||+++|+||.+|+.+|.++++.+++| ++|+|||||.| ++||+|+|++.... .
T Consensus 17 ~~~~~~i~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d-~vr~vVltg~G-~~FcaG~Dl~~~~~----~ 89 (264)
T 3he2_A 17 QGPGSMIGITQ-AEAVLTIELQRPERRNALNSQLVEELTQAIRKAGDG-SARAIVLTGQG-TAFCAGADLSGDAF----A 89 (264)
T ss_dssp -----CEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHCC----CCSEEEEEESS-SCSBCCBCCTTCTT----G
T ss_pred CCCCCeEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhC-CceEEEEECCC-CCccCCcCCccchh----h
Confidence 35677899987 799999999999999999999999999999999988 99999999998 89999999982100 0
Q ss_pred CCCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEe
Q 012534 142 RNTPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLA 221 (461)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~ 221 (461)
..+....+.++.+|.++||||||+|||+|+|||++|+++||+||++++++|+
T Consensus 90 ----------------------------~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~ 141 (264)
T 3he2_A 90 ----------------------------ADYPDRLIELHKAMDASPMPVVGAINGPAIGAGLQLAMQCDLRVVAPDAFFQ 141 (264)
T ss_dssp ----------------------------GGHHHHHHHHHHHHHHCSSCEEEEECSCEETHHHHHHHHSSEEEECTTCEEE
T ss_pred ----------------------------HHHHHHHHHHHHHHHhCCCCEEEEECCcEEcchhHHHHhCCEEEEcCCCEEE
Confidence 0134445677888999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHH
Q 012534 222 MPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIV 301 (461)
Q Consensus 222 ~pe~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~ 301 (461)
+||+++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||+|++ +. ++
T Consensus 142 ~pe~~~Gl~p~~g~~~~L~r~vG~~-~A~~llltG~~i~-A~eA~~~GLV~~v~~---~~---~a--------------- 198 (264)
T 3he2_A 142 FPTSKYGLALDNWSIRRLSSLVGHG-RARAMLLSAEKLT-AEIALHTGMANRIGT---LA---DA--------------- 198 (264)
T ss_dssp CTHHHHTCCCCHHHHHHHHHHHCHH-HHHHHHHHCCCEE-HHHHHHHTSCSEECC---HH---HH---------------
T ss_pred CcccccCcCCcchHHHHHHHHhCHH-HHHHHHHcCCCcc-HHHHHHCCCeEEEec---HH---HH---------------
Confidence 9999999999999999999999998 9999999999999 999999999999985 21 11
Q ss_pred HHHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 012534 302 ALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV 381 (461)
Q Consensus 302 ~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~ 381 (461)
.+||+ +|+++||.+++.+|++++..
T Consensus 199 ---------------------------------------------------~~~A~----~la~~~p~a~~~~K~~l~~~ 223 (264)
T 3he2_A 199 ---------------------------------------------------QAWAA----EIARLAPLAIQHAKRVLNDD 223 (264)
T ss_dssp ---------------------------------------------------HHHHH----HHHTSCHHHHHHHHHHHHTS
T ss_pred ---------------------------------------------------HHHHH----HHHcCCHHHHHHHHHHHHcc
Confidence 25555 79999999999999999974
Q ss_pred hhhcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCC
Q 012534 382 ASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 435 (461)
Q Consensus 382 ~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~ 435 (461)
. ++++.++.|.+.+..++.++|++||+++|+ +| |+|+|+++
T Consensus 224 ~-----------~~~~~~~~e~~~~~~~~~s~d~~Eg~~AF~-ek-R~P~f~g~ 264 (264)
T 3he2_A 224 G-----------AIEEAWPAHKELFDKAWGSQDVIEAQVARM-EK-RPPKFQGA 264 (264)
T ss_dssp S-----------CSCCCCHHHHHHHHHHHTSHHHHHHHHHHH-TT-SCCCCCCC
T ss_pred C-----------CHHHHHHHHHHHHHHHhCCHHHHHHHHHHh-cC-CCCCCCCC
Confidence 2 345567788888999999999999999999 78 89999864
No 55
>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3
Probab=100.00 E-value=1.2e-52 Score=414.19 Aligned_cols=256 Identities=18% Similarity=0.235 Sum_probs=210.4
Q ss_pred CccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCC
Q 012534 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRN 143 (461)
Q Consensus 64 ~~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~ 143 (461)
.++.+.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++ +|||||.| ++||+|+|++++......
T Consensus 24 ~~~~i~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~v-~vVltg~g-~~FcaG~Dl~~~~~~~~~--- 97 (280)
T 2f6q_A 24 GFETLVVTS-EDGITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSI-ITVLTGNG-DYYSSGNDLTNFTDIPPG--- 97 (280)
T ss_dssp ECSSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHSSCS-EEEEEEST-TCSBCCBCC----CCCTT---
T ss_pred CCCeEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHhhCCCE-EEEEeCCC-CCcccCCCHHHHhhcCcc---
Confidence 466788887 789999999999999999999999999999999999999 99999998 899999999987521000
Q ss_pred CCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEecc
Q 012534 144 TPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMP 223 (461)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~p 223 (461)
........+......++.+|.++||||||+|||+|+|||++|+++|||||++++++|++|
T Consensus 98 --------------------~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~p 157 (280)
T 2f6q_A 98 --------------------GVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTP 157 (280)
T ss_dssp --------------------HHHHHHHHHHHHHHHHHHHHHSCCSCEEEEECSCEETHHHHGGGGCSEEEEETTCEEECC
T ss_pred --------------------hhhHHHHHHHHHHHHHHHHHHcCCCCEEEEECCeeehHHHHHHHhCCEEEECCCcEEECc
Confidence 000001112333456778899999999999999999999999999999999999999999
Q ss_pred ccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHH
Q 012534 224 ENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVAL 303 (461)
Q Consensus 224 e~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~ 303 (461)
|+++|++|++|++++|++++|.. ++++|++||+.++ |+||+++||||++||++++.+.+.
T Consensus 158 e~~~Gl~p~~g~~~~L~r~vG~~-~A~~l~ltg~~~~-A~eA~~~GLv~~vv~~~~l~~~a~------------------ 217 (280)
T 2f6q_A 158 FSHLGQSPEGCSSYTFPKIMSPA-KATEMLIFGKKLT-AGEACAQGLVTEVFPDSTFQKEVW------------------ 217 (280)
T ss_dssp TGGGTCCCCTTHHHHHHHHHCHH-HHHHHHTTCCCEE-HHHHHHTTSCSEEECTTTHHHHHH------------------
T ss_pred hHhhCCCCcccHHHHHHHHhCHH-HHHHHHHcCCCCC-HHHHHHCCCcceEECHHHHHHHHH------------------
Confidence 99999999999999999999997 9999999999999 999999999999999988864322
Q ss_pred HHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 012534 304 LAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVAS 383 (461)
Q Consensus 304 l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~ 383 (461)
++|+ +|+.+||.+++.+|++++...
T Consensus 218 --------------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~~~- 242 (280)
T 2f6q_A 218 --------------------------------------------------TRLK----AFAKLPPNALRISKEVIRKRE- 242 (280)
T ss_dssp --------------------------------------------------HHHH----HHTTSCHHHHHHHHHHHHGGG-
T ss_pred --------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHhhh-
Confidence 4444 799999999999999999865
Q ss_pred hcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCC
Q 012534 384 AHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNP 430 (461)
Q Consensus 384 ~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P 430 (461)
..+++++++.|.+.+..++.++|++||+++|+ +| |+|
T Consensus 243 --------~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~-ek-R~p 279 (280)
T 2f6q_A 243 --------REKLHAVNAEECNVLQGRWLSDECTNAVVNFL-SR-KSK 279 (280)
T ss_dssp --------HHHHHHHHHHHHHHHHHHHTSHHHHC-------------
T ss_pred --------hcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-cc-CCC
Confidence 34689999999999999999999999999999 67 676
No 56
>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa}
Probab=100.00 E-value=9e-54 Score=417.59 Aligned_cols=249 Identities=18% Similarity=0.169 Sum_probs=189.6
Q ss_pred CCccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcC
Q 012534 63 GAEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDR 142 (461)
Q Consensus 63 ~~~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~ 142 (461)
+.++.|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| +.||+|+|++++........
T Consensus 9 ~~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~ 86 (258)
T 3lao_A 9 SGPGRVTREQ-RGHLFLIGLDRAGKRNAFDSAMLADLALAMGEYERSEESRCAVLFAHG-EHFTAGLDLMELAPKLAASG 86 (258)
T ss_dssp CSSCCEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESS-SCSBCCBCHHHHGGGCBTTB
T ss_pred CCCCeEEEEE-ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCC-CCeecCcCHHHHhhccchhh
Confidence 3567788887 799999999999999999999999999999999999999999999998 68999999999865322110
Q ss_pred CCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHH-hhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEe
Q 012534 143 NTPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKI-SEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLA 221 (461)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~ 221 (461)
. . +....+.++.++ .++||||||+|||+|+|||++|+++|||||++++++|+
T Consensus 87 ~-~--------------------------~~~~~~~~~~~l~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~ 139 (258)
T 3lao_A 87 F-R--------------------------YPDGGVDPWGVVQPRRSKPLVVAVQGTCWTAGIELMLNADIAVAARGTRFA 139 (258)
T ss_dssp C-C--------------------------CCTTCCCTTSCSSSCCCSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEE
T ss_pred H-H--------------------------HHHHHHHHHHHHHHhCCCCEEEEECCEeEhHHHHHHHhCCEEEEcCCCEEe
Confidence 0 0 001111234567 89999999999999999999999999999999999999
Q ss_pred ccccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHH
Q 012534 222 MPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIV 301 (461)
Q Consensus 222 ~pe~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~ 301 (461)
+||+++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||+|||++++.+.+.
T Consensus 140 ~pe~~~Gl~p~~g~~~~L~r~vG~~-~A~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a~---------------- 201 (258)
T 3lao_A 140 HLEVLRGIPPLGGSTVRFPRAAGWT-DAMRYILTGDEFD-ADEALRMRLLTEVVEPGEELARAL---------------- 201 (258)
T ss_dssp CGGGGTCCCSSCCCCSHHHHHHCHH-HHHHHHTTCCCEE-HHHHHHTTSCSEEECTTCHHHHHH----------------
T ss_pred CcccccCCCCCccHHHHHHHHhCHH-HHHHHHHcCCCCC-HHHHHHcCCCcEeeChhHHHHHHH----------------
Confidence 9999999999999999999999998 9999999999999 999999999999999998864322
Q ss_pred HHHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 012534 302 ALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV 381 (461)
Q Consensus 302 ~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~ 381 (461)
++|+ +|+++||.+++.+|++++..
T Consensus 202 ----------------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~~ 225 (258)
T 3lao_A 202 ----------------------------------------------------EYAE----RIARAAPLAVRAALQSAFQG 225 (258)
T ss_dssp ----------------------------------------------------HHHH----HHHHSCHHHHHHHHHHHHHH
T ss_pred ----------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHHh
Confidence 3444 79999999999999999987
Q ss_pred hhhcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhh
Q 012534 382 ASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVL 423 (461)
Q Consensus 382 ~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl 423 (461)
. ..+++++++.|.+.+..++.++|++||+++|+
T Consensus 226 ~---------~~~~~~~l~~e~~~~~~~~~s~d~~eg~~AF~ 258 (258)
T 3lao_A 226 R---------DEGDDAALSRVNESLAALIGSEDVREGVLAMV 258 (258)
T ss_dssp T---------C-------------------------------
T ss_pred h---------cCCHHHHHHHHHHHHHHHhCCHHHHHHHHhhC
Confidence 6 56899999999999999999999999999996
No 57
>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A
Probab=100.00 E-value=2.4e-53 Score=413.83 Aligned_cols=247 Identities=22% Similarity=0.328 Sum_probs=198.7
Q ss_pred CccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCC
Q 012534 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRN 143 (461)
Q Consensus 64 ~~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~ 143 (461)
.++.+.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++....
T Consensus 7 ~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vvltg~g-~~F~aG~Dl~~~~~~~----- 79 (256)
T 3pe8_A 7 DSPVLLVDT-TDRVRTLTLNRPQSRNALSAELRSTFFRALSDAQNDDDVDVVIVTGAD-PVFCAGLDLKELGDTT----- 79 (256)
T ss_dssp -CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEEST-TCSBCCBCTTTC---------
T ss_pred CCCcEEEEE-ECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCC-CCccCCcCHHHHhhhH-----
Confidence 356788887 799999999999999999999999999999999999999999999998 8999999999876420
Q ss_pred CCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEecc
Q 012534 144 TPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMP 223 (461)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~p 223 (461)
.+ ..+...+.++||||||+|||+|+|||++|+++|||||++++++|++|
T Consensus 80 ----------------------------~~---~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~p 128 (256)
T 3pe8_A 80 ----------------------------EL---PDISPKWPDMTKPVIGAINGAAVTGGLELALYCDILIASENAKFADT 128 (256)
T ss_dssp ------------------------------------CCCCCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECC
T ss_pred ----------------------------HH---HHHHHHHHhCCCCEEEEECCeeechHHHHHHhCCEEEEcCCCEEECc
Confidence 00 11235678999999999999999999999999999999999999999
Q ss_pred ccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHH
Q 012534 224 ENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVAL 303 (461)
Q Consensus 224 e~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~ 303 (461)
|+++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||++||++++.+.+.
T Consensus 129 e~~~Gl~p~~g~~~~L~r~vG~~-~A~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a~------------------ 188 (256)
T 3pe8_A 129 HARVGLMPTWGLSVRLPQKVGVG-LARRMSLTGDYLS-AQDALRAGLVTEVVAHDDLLTAAR------------------ 188 (256)
T ss_dssp HHHHTCCCCSSHHHHHHHHHCHH-HHHHHHHHCCCEE-HHHHHHHTSCSCEECGGGHHHHHH------------------
T ss_pred hhhhCCCCcccHHHHHHHhcCHH-HHHHHHHcCCCCC-HHHHHHCCCCeEEeCHhHHHHHHH------------------
Confidence 99999999999999999999998 9999999999999 999999999999999988764322
Q ss_pred HHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 012534 304 LAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVAS 383 (461)
Q Consensus 304 l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~ 383 (461)
++|+ +|+++||.+++.+|++++...
T Consensus 189 --------------------------------------------------~~a~----~la~~~~~a~~~~K~~~~~~~- 213 (256)
T 3pe8_A 189 --------------------------------------------------RVAA----SIVGNNQKAVRALLDSYHRID- 213 (256)
T ss_dssp --------------------------------------------------HHHH----HHHTSCHHHHHHHHHHHHHHH-
T ss_pred --------------------------------------------------HHHH----HHHcCCHHHHHHHHHHHHhhh-
Confidence 3444 799999999999999999876
Q ss_pred hcCCCccccCCHHHHHHHHHHHHHh---hcCCCcHHHHHHhhhcCCCCCCCCC
Q 012534 384 AHGKTDNELSKLSGVMKYEYRVALR---SSLRSDFAEGVRAVLVDKDQNPKWN 433 (461)
Q Consensus 384 ~~~~~~~~~~~l~~~l~~E~~~~~~---~~~s~d~~egv~afl~~K~r~P~w~ 433 (461)
..+++++++.|.+.+.. ...++|++|++++|+ +| ++|.|+
T Consensus 214 --------~~~~~~~l~~e~~~~~~~~~~~~~~d~~e~~~afl-ek-~k~~~~ 256 (256)
T 3pe8_A 214 --------ALQTGGALWAEAEAARQWMRSTSGDDIAASRASVI-ER-GRSQVR 256 (256)
T ss_dssp --------HHHHHHHHHHHHHHHHHHHHHC-----------------------
T ss_pred --------cCCHHHHHHHHHHHHHHHhhcccchHHHHHHHHHH-hc-cCccCC
Confidence 45799999999998654 477889999999999 67 899995
No 58
>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum}
Probab=100.00 E-value=5e-52 Score=408.77 Aligned_cols=250 Identities=19% Similarity=0.210 Sum_probs=212.8
Q ss_pred cceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCC
Q 012534 66 EFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTP 145 (461)
Q Consensus 66 ~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~ 145 (461)
+.|.++. +++|++||||||++ |+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.....
T Consensus 24 ~~v~~~~-~~~Va~ItlnrP~~-Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~FcaG~Dl~~~~~~~~------ 94 (277)
T 4di1_A 24 EFVSVVA-DQGLATLVVSRPPT-NAMTRQVYREIVAAADELGRRDDIGAVVLFGGH-EIFSAGDDMPELRTLNA------ 94 (277)
T ss_dssp CSEEEEE-ETTEEEEEECCTTT-TCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCS-SCSBCCBCHHHHHTCCH------
T ss_pred ceEEEEE-ECCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCC-CCEecCcCcccccccCh------
Confidence 5688887 79999999999999 999999999999999999999999999999997 89999999999864210
Q ss_pred CCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEecccc
Q 012534 146 LVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPEN 225 (461)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe~ 225 (461)
.....+....+.++.+|.++||||||+|||+|+|||++|+++|||||++++++|++||+
T Consensus 95 ---------------------~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~ 153 (277)
T 4di1_A 95 ---------------------PEADTAARVRLEAIDAVAAIPKPTVAAVTGYALGAGLTLALAADWRVSGDNVKFGATEI 153 (277)
T ss_dssp ---------------------HHHHHHHHHHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGG
T ss_pred ---------------------HHHHHHHHHHHHHHHHHHhCCCCEEEEECCeEehhHHHHHHhCCEEEEcCCCEEECccc
Confidence 11223455566788899999999999999999999999999999999999999999999
Q ss_pred ccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHHHH
Q 012534 226 GIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLA 305 (461)
Q Consensus 226 ~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~l~ 305 (461)
++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||+|||++++.+.+.
T Consensus 154 ~lGl~p~~g~~~~L~r~vG~~-~A~~llltG~~i~-A~eA~~~GLV~~vv~~~~l~~~a~-------------------- 211 (277)
T 4di1_A 154 LAGLIPGGGGMGRLTRVVGSS-RAKELVFSGRFFD-AEEALALGLIDDMVAPDDVYDSAV-------------------- 211 (277)
T ss_dssp GGTCCCCTTHHHHHHHHHCHH-HHHHHHHHCCCEE-HHHHHHHTSCSEEECGGGHHHHHH--------------------
T ss_pred ccCCCCCchHHHHHHHHhCHH-HHHHHHHcCCCCC-HHHHHHCCCccEEeChhHHHHHHH--------------------
Confidence 999999999999999999998 9999999999999 999999999999999888764332
Q ss_pred hhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhc
Q 012534 306 KYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAH 385 (461)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~~~ 385 (461)
++|+ +|+++||.+++.+|++++...
T Consensus 212 ------------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~~~--- 236 (277)
T 4di1_A 212 ------------------------------------------------AWAR----RYLECPPRALAAAKAVINDVF--- 236 (277)
T ss_dssp ------------------------------------------------HHHH----TTTTSCHHHHHHHHHHHHHTT---
T ss_pred ------------------------------------------------HHHH----HHHcCCHHHHHHHHHHHHhhh---
Confidence 3444 799999999999999999876
Q ss_pred CCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCC--CCCCCccCC
Q 012534 386 GKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPK--WNPASLEEV 440 (461)
Q Consensus 386 ~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~--w~~~~~~~v 440 (461)
..++.++++.|...+..++.++ +| |+|+ |+++.+.|-
T Consensus 237 ------~~~l~~~l~~e~~~~~~~~~s~-----------ek-R~P~~~f~g~~~~~~ 275 (277)
T 4di1_A 237 ------ELEATERAAAERRRYVELFAAG-----------QR-GPDGRGPGGGNTGDQ 275 (277)
T ss_dssp ------TSCHHHHHHHHHHHHHHTTSGG-----------GC----------------
T ss_pred ------cCCHHHHHHHHHHHHHHHhcCc-----------cc-CCCcCcCCCCCcCCC
Confidence 5689999999999999999888 67 8999 999987764
No 59
>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A*
Probab=100.00 E-value=2.2e-52 Score=405.94 Aligned_cols=246 Identities=22% Similarity=0.199 Sum_probs=199.6
Q ss_pred eEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEe-cCCCccccCCChhhHHHHhhhcCCCCC
Q 012534 68 VKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEG-SGPRAFCAGMDIKGVVAEIQKDRNTPL 146 (461)
Q Consensus 68 i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg-~G~~~FcaG~Dl~~~~~~~~~~~~~~~ 146 (461)
|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+||||| .| ++||+|+|++++.....
T Consensus 2 v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~~g-~~F~aG~Dl~~~~~~~~------- 72 (250)
T 2a7k_A 2 VFEEN-SDEVRVITLDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAE-RSFSAGGDFNEVKQLSR------- 72 (250)
T ss_dssp EEEEE-ETTEEEEEECCSSTTCBCCHHHHHHHHHHHHHHHHCTTCCEEEEECCTT-SCSBCBSCHHHHHTC-C-------
T ss_pred eEEEe-eCCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCC-CCccCCcCHHHHhhcCc-------
Confidence 55666 6899999999999999999999999999999999999999999999 76 89999999998753110
Q ss_pred CCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEeccccc
Q 012534 147 VPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENG 226 (461)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~ 226 (461)
......++...+.++.+|.++||||||+|||+|+|||++|+++|||||++++++|++||++
T Consensus 73 -------------------~~~~~~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~ 133 (250)
T 2a7k_A 73 -------------------SEDIEEWIDRVIDLYQAVLNVNKPTIAAVDGYAIGMGFQFALMFDQRLMASTANFVMPELK 133 (250)
T ss_dssp -------------------HHHHHHHHHHHHHHHHHHHTCCSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEECCGGG
T ss_pred -------------------hhhHHHHHHHHHHHHHHHHcCCCCEEEEECCeEeHHHHHHHHhCCEEEEcCCCEEeCcccc
Confidence 0001224445567888999999999999999999999999999999999999999999999
Q ss_pred cCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHHHHh
Q 012534 227 IGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAK 306 (461)
Q Consensus 227 lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~l~~ 306 (461)
+|++|++|++ +|++++|.. ++++|++||+.|+ |+||+++||||++||++++.+.+.
T Consensus 134 ~Gl~p~~g~~-~l~~~vG~~-~a~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a~--------------------- 189 (250)
T 2a7k_A 134 HGIGCSVGAA-ILGFTHGFS-TMQEIIYQCQSLD-APRCVDYRLVNQVVESSALLDAAI--------------------- 189 (250)
T ss_dssp GTCCCHHHHH-HHHHHHCHH-HHHHHHHHCCCBC-HHHHHHHTCCSEEECHHHHHHHHH---------------------
T ss_pred cCCCCCcHHH-HHHHHhHHH-HHHHHHHcCCccc-HHHHHHcCCcceecCHHHHHHHHH---------------------
Confidence 9999999999 999999997 9999999999999 999999999999999766653221
Q ss_pred hcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhcC
Q 012534 307 YSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHG 386 (461)
Q Consensus 307 ~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~~~~ 386 (461)
++|+ +|+++||.+++.+|++++...
T Consensus 190 -----------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~~~---- 214 (250)
T 2a7k_A 190 -----------------------------------------------TQAH----VMASYPASAFINTKRAVNKPF---- 214 (250)
T ss_dssp -----------------------------------------------HHHH----HHHTSCHHHHHHHHHHHHHHH----
T ss_pred -----------------------------------------------HHHH----HHHcCCHHHHHHHHHHHHHhh----
Confidence 4444 799999999999999999876
Q ss_pred CCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCC
Q 012534 387 KTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDK 426 (461)
Q Consensus 387 ~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K 426 (461)
..++.++++.|.+.+..++.++|++||+++|+ +|
T Consensus 215 -----~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~-ek 248 (250)
T 2a7k_A 215 -----IHLLEQTRDASKAVHKAAFQARDAQGHFKNVL-GK 248 (250)
T ss_dssp -----HHHHHHHHHHHHHHCC-------------------
T ss_pred -----hcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-hc
Confidence 34789999999999999999999999999999 66
No 60
>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis}
Probab=100.00 E-value=1.4e-52 Score=415.19 Aligned_cols=252 Identities=16% Similarity=0.149 Sum_probs=220.6
Q ss_pred CCccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcC
Q 012534 63 GAEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDR 142 (461)
Q Consensus 63 ~~~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~ 142 (461)
+.++.|.++. +++|++||||||+ +|+||.+|+.+|.++++.++.|+++|+|||||.|+++||+|+|++++........
T Consensus 5 ~~~~~v~~~~-~~~Va~itlnrP~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~ff~~G~Dl~~~~~~~~~~~ 82 (289)
T 3h0u_A 5 ASYETIKARL-DGTVLSATFNAPP-MNLIGPEVVRDLVALLEELAHPTAPRVVIFDSADADFFFPHVDMTKVPEYTAEAA 82 (289)
T ss_dssp CCCSSEEEEE-ETTEEEEEECCTT-TCCBCHHHHHHHHHHHHHTTSTTSCSEEEEEECSSSEEECSBCTTCHHHHHHHHH
T ss_pred CCCCeEEEEE-ECCEEEEEECCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCceeCCcCHHHHhhcCcchh
Confidence 4678899988 7999999999998 7999999999999999999999999999999998666777889999876432211
Q ss_pred CCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCC-ceEe
Q 012534 143 NTPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK-TLLA 221 (461)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~-a~f~ 221 (461)
... ..+....+.++.+|.++||||||+|||+|+|||++|+++|||||++++ ++|+
T Consensus 83 ~~~------------------------~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~~a~f~ 138 (289)
T 3h0u_A 83 KAG------------------------GPGDASLGMLFRKLSQLPAVTIAKLRGRARGAGSEFLLACDMRFASRENAILG 138 (289)
T ss_dssp TTS------------------------STTCCSHHHHHHHHHTCSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEE
T ss_pred hhH------------------------HHHHHHHHHHHHHHHhCCCCEEEEECCEeehhhHHHHHhCCEEEEeCCCcEEe
Confidence 000 002223456778899999999999999999999999999999999998 9999
Q ss_pred ccccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHH
Q 012534 222 MPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIV 301 (461)
Q Consensus 222 ~pe~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~ 301 (461)
+||+++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||+|||++++.+.+.
T Consensus 139 ~pe~~lGl~p~~g~~~~L~r~vG~~-~A~ellltG~~i~-A~eA~~~GLV~~vv~~~~l~~~a~---------------- 200 (289)
T 3h0u_A 139 QPEVGIGAPPGAGAIQHLTRLLGRG-RALEAVLTSSDFD-ADLAERYGWVNRAVPDAELDEFVA---------------- 200 (289)
T ss_dssp CTHHHHTSCCCSSHHHHHHHHHCHH-HHHHHHHHCCCEE-HHHHHHHTSSSEEECHHHHHHHHH----------------
T ss_pred CchhhcCCCCCccHHHHHHHHhCHH-HHHHHHHcCCCCC-HHHHHHCCCccEecCHHHHHHHHH----------------
Confidence 9999999999999999999999998 9999999999999 999999999999999877653222
Q ss_pred HHHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 012534 302 ALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV 381 (461)
Q Consensus 302 ~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~ 381 (461)
++|+ +|+++||.+++.+|++++..
T Consensus 201 ----------------------------------------------------~lA~----~la~~~p~a~~~~K~~l~~~ 224 (289)
T 3h0u_A 201 ----------------------------------------------------GIAA----RMSGFPRDALIAAKSAINAI 224 (289)
T ss_dssp ----------------------------------------------------HHHH----HHHTSCHHHHHHHHHHHHHH
T ss_pred ----------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHhh
Confidence 3444 79999999999999999987
Q ss_pred hhhcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhc
Q 012534 382 ASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLV 424 (461)
Q Consensus 382 ~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~ 424 (461)
. . ++.++++.|...+..++.++|++||+++|++
T Consensus 225 ~---------~-~l~~~l~~e~~~~~~~~~s~d~~egi~AFle 257 (289)
T 3h0u_A 225 S---------L-PAPAEVRADAALFQQLVRGEKVQQRTAELFK 257 (289)
T ss_dssp H---------S-CCHHHHHHHHHHHHHHTTSHHHHHHHHHHHH
T ss_pred c---------c-cHHHHHHHHHHHHHHHhCCHHHHHHHHHHhC
Confidence 6 4 7899999999999999999999999999994
No 61
>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi}
Probab=100.00 E-value=9.6e-52 Score=404.33 Aligned_cols=253 Identities=19% Similarity=0.227 Sum_probs=207.2
Q ss_pred CccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCC
Q 012534 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRN 143 (461)
Q Consensus 64 ~~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~ 143 (461)
+++.+.++..+++|++||||||++ |+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++........
T Consensus 4 ~~~~~~~~~~~~~v~~itlnrP~~-Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~- 80 (263)
T 3l3s_A 4 SQDGLLGEVLSEGVLTLTLGRAPA-HPLSRAMIAALHDALRRAMGDDHVHVLVIHGPG-RIFCAGHDLKEIGRHRADPD- 80 (263)
T ss_dssp ----CEEEEESSSEEEEEECSTTT-CCCCHHHHHHHHHHHHHHHTCTTCCEEEEECCS-SEEECCSCSCCCCC-----C-
T ss_pred CccceEEEEeeCCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CCccCCcChHHHhhcccccc-
Confidence 345667776689999999999999 999999999999999999999999999999998 89999999998753210000
Q ss_pred CCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEecc
Q 012534 144 TPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMP 223 (461)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~p 223 (461)
........++...+.++.+|.++||||||+|||+|+|||++|+++|||||++++++|++|
T Consensus 81 --------------------~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~p 140 (263)
T 3l3s_A 81 --------------------EGRAFVTDLFEACSALMLDLAHCPKPTIALVEGIATAAGLQLMAACDLAYASPAARFCLP 140 (263)
T ss_dssp --------------------CSHHHHHHHHHHHHHHHHHHHTCSSCEEEEESSEEETHHHHHHHHSSEEEECTTCEEECC
T ss_pred --------------------ccHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCEEEHHHHHHHHHCCEEEecCCCEEeCc
Confidence 011223346666778889999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHH
Q 012534 224 ENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVAL 303 (461)
Q Consensus 224 e~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~ 303 (461)
|+++|++ ++|++++|++++|.. ++++|++||+.|+ |+||+++||||+|||++++.+.+.
T Consensus 141 e~~~Gl~-~~g~~~~l~r~vG~~-~A~~l~ltg~~~~-A~eA~~~GLv~~vv~~~~l~~~a~------------------ 199 (263)
T 3l3s_A 141 GVQNGGF-CTTPAVAVSRVIGRR-AVTEMALTGATYD-ADWALAAGLINRILPEAALATHVA------------------ 199 (263)
T ss_dssp TTTTTSC-CHHHHHHHHTTSCHH-HHHHHHHHCCEEE-HHHHHHHTSSSEECCHHHHHHHHH------------------
T ss_pred hhccCCC-CccHHHHHHHHcCHH-HHHHHHHcCCCCC-HHHHHHCCCccEEeCHHHHHHHHH------------------
Confidence 9999999 578999999999998 9999999999999 999999999999999776653222
Q ss_pred HHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 012534 304 LAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVAS 383 (461)
Q Consensus 304 l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~ 383 (461)
++|+ +|+++||.+++.+|++++...
T Consensus 200 --------------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~~~- 224 (263)
T 3l3s_A 200 --------------------------------------------------DLAG----ALAARNQAPLRRGLETLNRHL- 224 (263)
T ss_dssp --------------------------------------------------HHHH----HHHSSCHHHHHHHHHHHHHHT-
T ss_pred --------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHhhh-
Confidence 3444 799999999999999999876
Q ss_pred hcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhh
Q 012534 384 AHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVL 423 (461)
Q Consensus 384 ~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl 423 (461)
..+++++++.|.+.+..++.++|++||++||.
T Consensus 225 --------~~~l~~~l~~e~~~~~~~~~s~d~~Eg~~Af~ 256 (263)
T 3l3s_A 225 --------ELPLEQAYALATPVMVEHFMDPGRRHLDWIDE 256 (263)
T ss_dssp --------TSCHHHHHHHHHHHHHHHHC------------
T ss_pred --------cCCHHHHHHHHHHHHHHHhCCHHHHHHHHHhh
Confidence 56899999999999999999999999999998
No 62
>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A
Probab=100.00 E-value=3.8e-52 Score=406.51 Aligned_cols=250 Identities=17% Similarity=0.227 Sum_probs=213.0
Q ss_pred eEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCCC
Q 012534 68 VKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLV 147 (461)
Q Consensus 68 i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~ 147 (461)
+.++. +++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||||.|+++||+|+|++++....
T Consensus 7 v~~~~-~~~v~~itlnrp~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~--------- 75 (260)
T 1sg4_A 7 VEPDA-GAGVAVMKFKNPP-VNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCGRS--------- 75 (260)
T ss_dssp EEEET-TTTEEEEEECCTT-TTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSTEESCCEECGGGGSSCC---------
T ss_pred EEEEe-cCCEEEEEECCCC-CCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCceEcCcCHHHHhccC---------
Confidence 44444 6899999999997 699999999999999999999999999999999558999999999864210
Q ss_pred CCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEc--CCceEecccc
Q 012534 148 PKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVT--EKTLLAMPEN 225 (461)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~--e~a~f~~pe~ 225 (461)
......++...+.++.+|.++||||||+|||+|+|||++|+++|||||++ ++++|++||+
T Consensus 76 ------------------~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~~~a~f~~pe~ 137 (260)
T 1sg4_A 76 ------------------PAHYAGYWKAVQELWLRLYQSNLVLVSAINGACPAGGCLVALTCDYRILADNPRYCIGLNET 137 (260)
T ss_dssp ------------------HHHHHHHHHHHHHHHHHHHTCSSEEEEEECEEBCHHHHHHHTTSSEEEEECCTTCCBSCCGG
T ss_pred ------------------HHHHHHHHHHHHHHHHHHHcCCCCEEEEECCeeehHHHHHHHhCCEEEEecCCCCEEeCchh
Confidence 00122244556678889999999999999999999999999999999999 8999999999
Q ss_pred ccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHHHH
Q 012534 226 GIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLA 305 (461)
Q Consensus 226 ~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~l~ 305 (461)
++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||++||++++.+.+.
T Consensus 138 ~~Gl~p~~g~~~~l~~~vG~~-~a~~llltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a~-------------------- 195 (260)
T 1sg4_A 138 QLGIIAPFWLKDTLENTIGHR-AAERALQLGLLFP-PAEALQVGIVDQVVPEEQVQSTAL-------------------- 195 (260)
T ss_dssp GGTCCCCHHHHHHHHHHHCHH-HHHHHHHHTCCBC-HHHHHHHTSSSEEECGGGHHHHHH--------------------
T ss_pred hhCCCCchhHHHHHHHHhCHH-HHHHHHHcCCcCC-HHHHHHcCCCCEecCHHHHHHHHH--------------------
Confidence 999999999999999999997 9999999999999 999999999999999888764222
Q ss_pred hhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhc
Q 012534 306 KYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAH 385 (461)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~~~ 385 (461)
+||+ +|+.+||.+++.+|++++...
T Consensus 196 ------------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~~~--- 220 (260)
T 1sg4_A 196 ------------------------------------------------SAIA----QWMAIPDHARQLTKAMMRKAT--- 220 (260)
T ss_dssp ------------------------------------------------HHHH----HHHTSCHHHHHHHHHHHHHHH---
T ss_pred ------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHHhh---
Confidence 4444 799999999999999999875
Q ss_pred CCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCC
Q 012534 386 GKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPK 431 (461)
Q Consensus 386 ~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~ 431 (461)
..++.++++.|.+.+..++.++|++||+++|+ +| |+|+
T Consensus 221 ------~~~~~~~~~~e~~~~~~~~~s~d~~eg~~af~-ek-r~~~ 258 (260)
T 1sg4_A 221 ------ASRLVTQRDADVQNFVSFISKDSIQKSLQMYL-ER-LKEE 258 (260)
T ss_dssp ------HHHHHTTHHHHHHHHHHHHTSHHHHHHHTC----------
T ss_pred ------hccHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-Hh-hccc
Confidence 34688889999999999999999999999999 67 7775
No 63
>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis}
Probab=100.00 E-value=1.7e-51 Score=400.65 Aligned_cols=244 Identities=16% Similarity=0.194 Sum_probs=203.7
Q ss_pred eEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCCC
Q 012534 68 VKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLV 147 (461)
Q Consensus 68 i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~ 147 (461)
|.++. +++|++||||||+++|+||.+|+.+|.++++.+++ +++|+|||||.| ++||+|+|++++.....
T Consensus 9 v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~-~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~-------- 77 (254)
T 3isa_A 9 LAIER-RPAAWTFTLSRPEKRNALSAELVEALIDGVDAAHR-EQVPLLVFAGAG-RNFSAGFDFTDYETQSE-------- 77 (254)
T ss_dssp EEEEE-CSSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHH-TTCSEEEEEEST-TCSCCCBCCTTCTTSCH--------
T ss_pred EEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEECCC-CceeeCcChHHhhccCc--------
Confidence 77887 79999999999999999999999999999999987 589999999998 89999999998743110
Q ss_pred CCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEecccccc
Q 012534 148 PKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGI 227 (461)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~l 227 (461)
......+...+.++.+|.++||||||+|||+|+|||++|+++|||||++++++|++||+++
T Consensus 78 -------------------~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~ 138 (254)
T 3isa_A 78 -------------------GDLLLRMVRIEMLLQRVAGSPSLTLALAHGRNFGAGVDLFAACKWRYCTPEAGFRMPGLKF 138 (254)
T ss_dssp -------------------HHHHHHHHHHHHHHHHHHTCSSEEEEEECSEEETHHHHHHHHSSEEEECTTCEEECCGGGG
T ss_pred -------------------hhHHHHHHHHHHHHHHHHhCCCCEEEEECCeEeecchhHHHhCCEEEEcCCCEEECchhcc
Confidence 0111233445678889999999999999999999999999999999999999999999999
Q ss_pred CCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHHHHhh
Q 012534 228 GLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKY 307 (461)
Q Consensus 228 Gl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~l~~~ 307 (461)
|++| ++++|++++|.. ++++|++||+.|+ |+||+++||||+|||++++.+.+.
T Consensus 139 Gl~p---g~~~l~~~vG~~-~A~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a~---------------------- 191 (254)
T 3isa_A 139 GLVL---GTRRFRDIVGAD-QALSILGSARAFD-ADEARRIGFVRDCAAQAQWPALID---------------------- 191 (254)
T ss_dssp TCCC---SHHHHHHHHCHH-HHHHHHTTTCEEE-HHHHHHTTSSSEECCGGGHHHHHH----------------------
T ss_pred CccH---HHHHHHHHcCHH-HHHHHHHhCCCCc-HHHHHHCCCccEEeChhHHHHHHH----------------------
Confidence 9998 478999999998 9999999999999 999999999999999988764322
Q ss_pred cCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhcCC
Q 012534 308 SSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGK 387 (461)
Q Consensus 308 ~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~ 387 (461)
++++ ++++.||.+++.+|++++.
T Consensus 192 ----------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~------- 214 (254)
T 3isa_A 192 ----------------------------------------------AAAE----AATALDPATRATLHRVLRD------- 214 (254)
T ss_dssp ----------------------------------------------HHHH----HHTTSCHHHHHHHHHHHSC-------
T ss_pred ----------------------------------------------HHHH----HHHcCCHHHHHHHHHHHhh-------
Confidence 3333 7999999999999999853
Q ss_pred CccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCCC
Q 012534 388 TDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPAS 436 (461)
Q Consensus 388 ~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~~ 436 (461)
.. ++.|...+...+.++|++||+++|+ +| |+|.|++..
T Consensus 215 -----~~----~~~e~~~~~~~~~s~d~~egi~af~-ek-r~p~~~~~~ 252 (254)
T 3isa_A 215 -----DH----DDADLAALARSAAQPGFKARIRDYL-AQ-PAAEGHHHH 252 (254)
T ss_dssp -----CC----HHHHHHHHHHHHHSTTHHHHHHHHH-HC----------
T ss_pred -----hh----HHHHHHHHHHHhCCHHHHHHHHHHH-hc-CCCCCCCCC
Confidence 12 2457777888889999999999999 67 899999864
No 64
>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A
Probab=100.00 E-value=3.7e-51 Score=395.68 Aligned_cols=239 Identities=16% Similarity=0.205 Sum_probs=210.9
Q ss_pred eEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCCC
Q 012534 68 VKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLV 147 (461)
Q Consensus 68 i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~ 147 (461)
+.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++....... . .
T Consensus 5 ~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~-~-~-- 78 (243)
T 2q35_A 5 QLTEL-GNGVVQITMKDESSRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYG-NYFSSGASKEFLIRKTRGE-V-E-- 78 (243)
T ss_dssp EEEEE-ETTEEEEEECCGGGTSBSCHHHHHHHHHHHHHHHHCTTCCEEEEECBT-TEEECBSCHHHHHHHHTTC-C-C--
T ss_pred EEEEe-eCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CCeeCCCChHHHhhccchh-h-H--
Confidence 34454 789999999999999999999999999999999999999999999998 8999999999886532110 0 0
Q ss_pred CCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEecccccc
Q 012534 148 PKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGI 227 (461)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~l 227 (461)
.+.++..+.++||||||+|||+|+|||++|+++|||||++++++|++||+++
T Consensus 79 ----------------------------~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~ 130 (243)
T 2q35_A 79 ----------------------------VLDLSGLILDCEIPIIAAMQGHSFGGGLLLGLYADFVVFSQESVYATNFMKY 130 (243)
T ss_dssp ----------------------------CCCCHHHHHTCCSCEEEEECSEEETHHHHHHHTSSEEEEESSSEEECCHHHH
T ss_pred ----------------------------HHHHHHHHHhCCCCEEEEEcCccccchHHHHHhCCEEEEeCCCEEECCcccc
Confidence 0234557889999999999999999999999999999999999999999999
Q ss_pred CCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHHHHhh
Q 012534 228 GLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKY 307 (461)
Q Consensus 228 Gl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~l~~~ 307 (461)
|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||++||++++.+.+.
T Consensus 131 Gl~p~~g~~~~l~~~vG~~-~a~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a~---------------------- 186 (243)
T 2q35_A 131 GFTPVGATSLILREKLGSE-LAQEMIYTGENYR-GKELAERGIPFPVVSRQDVLNYAQ---------------------- 186 (243)
T ss_dssp TSCCCSSHHHHHHHHHCHH-HHHHHHHHCCCEE-HHHHHHTTCSSCEECHHHHHHHHH----------------------
T ss_pred CCCCcchHHHHHHHHhCHH-HHHHHHHcCCCCC-HHHHHHcCCCCEecChhHHHHHHH----------------------
Confidence 9999999999999999997 9999999999999 999999999999998776653221
Q ss_pred cCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhcCC
Q 012534 308 SSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGK 387 (461)
Q Consensus 308 ~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~ 387 (461)
+||+ +|+++||.+++.+|++++...
T Consensus 187 ----------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~~~----- 211 (243)
T 2q35_A 187 ----------------------------------------------QLGQ----KIAKSPRLSLVALKQHLSADI----- 211 (243)
T ss_dssp ----------------------------------------------HHHH----HHTTSCHHHHHHHHHHHHHHH-----
T ss_pred ----------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHHhh-----
Confidence 4444 799999999999999999876
Q ss_pred CccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhh
Q 012534 388 TDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVL 423 (461)
Q Consensus 388 ~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl 423 (461)
..++.++++.|.+.+..++.++|++||+++|.
T Consensus 212 ----~~~~~~~~~~e~~~~~~~~~s~d~~eg~~a~~ 243 (243)
T 2q35_A 212 ----KAKFPEAIKKELEIHQVTFNQPEIASRIQQEF 243 (243)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHSSTTHHHHHHTTC
T ss_pred ----hcCHHHHHHHHHHHHHHHhCCHHHHHHHhhcC
Confidence 34688999999999999999999999999873
No 65
>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A
Probab=100.00 E-value=1.5e-49 Score=392.27 Aligned_cols=195 Identities=19% Similarity=0.203 Sum_probs=166.4
Q ss_pred CCccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcC
Q 012534 63 GAEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDR 142 (461)
Q Consensus 63 ~~~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~ 142 (461)
|.|+.|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++........
T Consensus 6 m~~~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~FcaG~Dl~~~~~~~~~~~ 83 (280)
T 1pjh_A 6 RQNEKISYRI-EGPFFIIHLINPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSG-RFFSSGADFKGIAKAQGDDT 83 (280)
T ss_dssp CCBTTEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECBT-TBSBCCBCHHHHHC------
T ss_pred ccCCceEEEE-ECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCC-CCccCCcCHHHHhhcccccc
Confidence 4567788887 789999999999999999999999999999999999999999999998 89999999998753211000
Q ss_pred CCCCCCCCCCCCCCcchhhhhhhhHHH-HHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEc-CCceE
Q 012534 143 NTPLVPKVPLKCGDVKEISTQNQLSEM-IEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVT-EKTLL 220 (461)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~-e~a~f 220 (461)
. .. . ...... ..++...+.++..|.++||||||+|||+|+|||++|+++|||||++ ++++|
T Consensus 84 ~-~~-~---------------~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~~ia~~~~a~f 146 (280)
T 1pjh_A 84 N-KY-P---------------SETSKWVSNFVARNVYVTDAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSINDKVYL 146 (280)
T ss_dssp --CC-S---------------SHHHHHHHHTHHHHHHHHHHHHHCCSEEEEEECSCEEHHHHHHHHHSSEEEESSTTCEE
T ss_pred c-ch-h---------------hhHHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeeeHHHHHHHHCCEEEEeCCCCEE
Confidence 0 00 0 000001 1223334567788999999999999999999999999999999999 99999
Q ss_pred eccccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCC
Q 012534 221 AMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSG 278 (461)
Q Consensus 221 ~~pe~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~ 278 (461)
++||+++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||+|||++
T Consensus 147 ~~pe~~lGl~p~~g~~~~l~r~vG~~-~A~~llltg~~~~-a~eA~~~GLv~~vv~~~ 202 (280)
T 1pjh_A 147 LYPFANLGLITEGGTTVSLPLKFGTN-TTYECLMFNKPFK-YDIMCENGFISKNFNMP 202 (280)
T ss_dssp ECCHHHHTCCCCTTHHHHHHHHHCHH-HHHHHHHTTCCEE-HHHHHHTTCCSEECCCC
T ss_pred eCchhhcCCCCCccHHHHHHHHhCHH-HHHHHHHhCCCCC-HHHHHHCCCcceeeCCc
Confidence 99999999999999999999999998 9999999999999 99999999999999986
No 66
>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A
Probab=100.00 E-value=7.6e-48 Score=384.19 Aligned_cols=254 Identities=15% Similarity=0.111 Sum_probs=214.9
Q ss_pred CCccceEEEE-ecCcEEEEEEcCCCC----CCCCCHHHHHHHHHHHHHHhc-----CCCceEEEEEecCCCccccCCChh
Q 012534 63 GAEEFVKGNV-HPNGVAVITLDRPKA----LNAMNLDMDIKYKSFLDEWES-----DPRVKCVLIEGSGPRAFCAGMDIK 132 (461)
Q Consensus 63 ~~~~~i~~~~-~~~~V~~ItLnrP~~----~Nal~~~m~~eL~~~l~~~~~-----d~~vr~vVltg~G~~~FcaG~Dl~ 132 (461)
..|+.|.+.. .+++|++||||||++ +|+||.+|+.+|.++|+.++. |+++|+|||||.| ++||+|+|++
T Consensus 27 ~~y~~i~v~~~~~~~V~~itLnrp~k~n~~rpal~~~m~~eL~~al~~~~~d~~~~d~~vr~vVltg~G-~~FcaG~Dl~ 105 (305)
T 3m6n_A 27 NIGSTLRIIEEPQRDVYWIHMHADLAINPGRACFSTRLVDDITGYQTNLGQRLNTAGVLAPHVVLASDS-DVFNLGGDLA 105 (305)
T ss_dssp --CTTEEEEEETTTTEEEEEECTTC-----CCSBCHHHHHHHHHHHHHHHHHHHHHTCSSCEEEEEESS-SSSBCCBCHH
T ss_pred cCCceEEEEEEEECCEEEEEECCccccCCCCCCCCHHHHHHHHHHHHHHHhcccccCCCeEEEEEECCC-CCeecCcCHH
Confidence 3467776653 378999999999998 559999999999999999987 5899999999987 8999999999
Q ss_pred hHHHHhhhcCCCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHH---hhCCCcEEEEeCCccchhhhHhhhcC
Q 012534 133 GVVAEIQKDRNTPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKI---SEYKKPYISLMDGVTMGFGIGISGHG 209 (461)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~kPvIAavnG~a~GgG~~Lalac 209 (461)
++........ ......++...+..+..+ ..+||||||+|||+|+|||++|+++|
T Consensus 106 ~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~l~~~~~~~kPvIAaV~G~a~GgG~~Lalac 162 (305)
T 3m6n_A 106 LFCQLIREGD-----------------------RARLLDYAQRCVRGVHAFHVGLGARAHSIALVQGNALGGGFEAALSC 162 (305)
T ss_dssp HHHHHHHHTC-----------------------HHHHHHHHHHHHHHHHHHHTGGGTTCEEEEEECSCEETHHHHHHHHS
T ss_pred HHHhcccccc-----------------------HHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEECCEeehHHHHHHHhC
Confidence 9876432110 011223444444444444 56999999999999999999999999
Q ss_pred CeEEEcCCceEeccccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHh
Q 012534 210 RYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLA 289 (461)
Q Consensus 210 D~ria~e~a~f~~pe~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~ 289 (461)
||||++++++|++||+++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||+|||++++.+.+.
T Consensus 163 D~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~-~A~~llltG~~i~-A~eA~~~GLv~~vv~~~~l~~~a~---- 236 (305)
T 3m6n_A 163 HTIIAEEGVMMGLPEVLFDLFPGMGAYSFMCQRISAH-LAQKIMLEGNLYS-AEQLLGMGLVDRVVPRGQGVAAVE---- 236 (305)
T ss_dssp SEEEEETTCEEECGGGGGTCCCCSSHHHHHTTTSCHH-HHHHHHHHCCEEE-HHHHHHHTSCSEEECTTCHHHHHH----
T ss_pred CEEEEcCCCEEECchhccCcCCCccHHHHHHHHhcHH-HHHHHHHcCCCCC-HHHHHHCCCCCEecChhHHHHHHH----
Confidence 9999999999999999999999999999999999998 9999999999999 999999999999999999875332
Q ss_pred cccCCChHHHHHHHHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCch
Q 012534 290 VTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPF 369 (461)
Q Consensus 290 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~ 369 (461)
++|+ +|++ +|.
T Consensus 237 ----------------------------------------------------------------~~a~----~la~-~p~ 247 (305)
T 3m6n_A 237 ----------------------------------------------------------------QVIR----ESKR-TPH 247 (305)
T ss_dssp ----------------------------------------------------------------HHHH----HHTT-CHH
T ss_pred ----------------------------------------------------------------HHHH----HHhh-ChH
Confidence 4444 6875 899
Q ss_pred HHHHHHHHHHHHhhhcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhc
Q 012534 370 SLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLV 424 (461)
Q Consensus 370 al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~ 424 (461)
+++.+|++++... ..+++++++.|.+.+..++.++|....+-+.++
T Consensus 248 a~~~~K~~l~~~~---------~~~l~~~l~~e~~~~~~~~~s~d~~~~~m~~l~ 293 (305)
T 3m6n_A 248 AWAAMQQVREMTT---------AVPLEEMMRITEIWVDTAMQLGEKSLRTMDRLV 293 (305)
T ss_dssp HHHHHHHHHHTTT---------CCCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhh---------cCCHHHHHHHHHHHHHHHHcCchHHHHHHHHHH
Confidence 9999999999876 578999999999999999999999888888775
No 67
>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D
Probab=100.00 E-value=5.7e-49 Score=384.39 Aligned_cols=240 Identities=15% Similarity=0.181 Sum_probs=206.2
Q ss_pred CCccceEEEEecC-cEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhc
Q 012534 63 GAEEFVKGNVHPN-GVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKD 141 (461)
Q Consensus 63 ~~~~~i~~~~~~~-~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~ 141 (461)
..++.|.++. ++ +|++|+||||++.|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.....
T Consensus 20 ~~~~~i~~~~-~~~~Va~ItLnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~FcaG~Dl~~~~~~~~-- 95 (263)
T 2j5g_A 20 TKYENLHFHR-DENGILEVRMHTNGSSLVFTGKTHREFPDAFYDISRDRDNRVVILTGSG-DAWMAEIDFPSLGDVTN-- 95 (263)
T ss_dssp GSCTTEEEEE-CTTCEEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBT-TEEECEECSGGGCCTTS--
T ss_pred CCCCeEEEEE-cCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCC-CCcccCcCHHHHhccCC--
Confidence 3466788887 67 9999999999999999999999999999999999999999999998 89999999998642100
Q ss_pred CCCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEe
Q 012534 142 RNTPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLA 221 (461)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~ 221 (461)
......++.....++.++.++||||||+|||+|+ ||++|+++|||||++++++|+
T Consensus 96 ------------------------~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~-GG~~LalacD~ria~~~a~f~ 150 (263)
T 2j5g_A 96 ------------------------PREWDKTYWEGKKVLQNLLDIEVPVISAVNGAAL-LHSEYILTTDIILASENTVFQ 150 (263)
T ss_dssp ------------------------HHHHHHHHHHHHHHHHHHHTCCSCEEEEECSEEC-SCGGGGGGCSEEEEETTCEEC
T ss_pred ------------------------HHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcch-HHHHHHHhCCEEEEcCCCEEe
Confidence 0011123444556778899999999999999999 599999999999999999999
Q ss_pred c-cccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHH
Q 012534 222 M-PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDI 300 (461)
Q Consensus 222 ~-pe~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~ 300 (461)
+ ||+++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||++||++++.+.+.
T Consensus 151 ~~pe~~lGl~p~~g~~~~L~r~vG~~-~A~~llltG~~~~-A~eA~~~GLv~~vv~~~~l~~~a~--------------- 213 (263)
T 2j5g_A 151 DMPHLNAGIVPGDGVHILWPLALGLY-RGRYFLFTQEKLT-AQQAYELNVVHEVLPQSKLMERAW--------------- 213 (263)
T ss_dssp CCHHHHHTCCCCSSHHHHHHHHHHHH-HHHHHHHTTCCEE-HHHHHHTTSCSEEECGGGHHHHHH---------------
T ss_pred cCcccccccCCCccHHHHHHHHcCHH-HHHHHHHcCCCCC-HHHHHHCCCccEecChHHHHHHHH---------------
Confidence 9 999999999999999999999997 9999999999999 999999999999999888764222
Q ss_pred HHHHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 012534 301 VALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSK 380 (461)
Q Consensus 301 ~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~ 380 (461)
++|+ +|+++||.+++.+|++++.
T Consensus 214 -----------------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~ 236 (263)
T 2j5g_A 214 -----------------------------------------------------EIAR----TLAKQPTLNLRYTRVALTQ 236 (263)
T ss_dssp -----------------------------------------------------HHHH----HHHTSCHHHHHHHHHHHHH
T ss_pred -----------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHh
Confidence 4444 7999999999999999998
Q ss_pred HhhhcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCC
Q 012534 381 VASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDK 426 (461)
Q Consensus 381 ~~~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K 426 (461)
.. ..++.+++..|. ..|||+||+ .|
T Consensus 237 ~~---------~~~l~~~l~~e~-----------~~eg~~af~-~~ 261 (263)
T 2j5g_A 237 RL---------KRLVNEGIGYGL-----------ALEGITATD-LR 261 (263)
T ss_dssp HH---------HHHHHHHHHHHH-----------HHHHHHHHH-TT
T ss_pred hh---------hccHHHHHHHHH-----------HHhhHHHHH-hc
Confidence 76 346777777764 449999999 55
No 68
>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A
Probab=100.00 E-value=1.7e-48 Score=393.34 Aligned_cols=281 Identities=17% Similarity=0.214 Sum_probs=209.2
Q ss_pred CCccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcC
Q 012534 63 GAEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDR 142 (461)
Q Consensus 63 ~~~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~ 142 (461)
..++.|.++. +++|++||||||+++|+||.+|+.+|.++|+.++.|+++|+|||||.| ++||+|+|++++........
T Consensus 32 ~~~~~i~~e~-~~~Va~ItLnrP~~~NAl~~~m~~eL~~al~~~~~d~~vrvvVltG~G-~~FcaG~Dl~~~~~~~~~~~ 109 (333)
T 3njd_A 32 DNLKTMTYEV-TDRVARITFNRPEKGNAIVADTPLELSALVERADLDPDVHVILVSGRG-EGFCAGFDLSAYAEGSSSAG 109 (333)
T ss_dssp TSCSSEEEEE-ETTEEEEEECCGGGTTCBCTHHHHHHHHHHHHHHHCTTCCEEEEEEST-TSSBCCBC------------
T ss_pred CCCCeEEEEE-ECCEEEEEeCCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCC-CceecCcCHHHHhhcccccc
Confidence 4678899998 799999999999999999999999999999999999999999999998 89999999999865321110
Q ss_pred CCCCCCCCCCCCCCcchhhh---------hhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEE
Q 012534 143 NTPLVPKVPLKCGDVKEIST---------QNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRI 213 (461)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ri 213 (461)
..... ......... .-.......++..+..++..|.++||||||+|||+|+|||++|+++|||||
T Consensus 110 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ri 183 (333)
T 3njd_A 110 GGSPY------EGTVLSGKTQALNHLPDEPWDPMVDYQMMSRFVRGFASLMHCDKPTVVKIHGYCVAGGTDIALHADQVI 183 (333)
T ss_dssp ---CC------TTSTTCHHHHHHTTCSSSCCCHHHHHHHHHHHHHHHTHHHHSSSCEEEEECSEEETHHHHHHTTSSEEE
T ss_pred ccccc------ccccccccccccccccccccchhhHHHHHHHHHHHHHHHHhCCCCEEEEECCEEeHHHHHHHHhCCEEE
Confidence 00000 000000000 000001123455566778889999999999999999999999999999999
Q ss_pred EcCCceEeccccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccC
Q 012534 214 VTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFS 293 (461)
Q Consensus 214 a~e~a~f~~pe~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~ 293 (461)
|+++++|++||+++|++|++| +|++++|.. ++++|+|||+.|+ |+||+++||||+|||++++.+.+.
T Consensus 184 as~~a~f~~pe~~lG~~P~~g---~l~~~vG~~-~A~ellltG~~i~-A~eA~~~GLV~~vv~~~~l~~~a~-------- 250 (333)
T 3njd_A 184 AAADAKIGYPPMRVWGVPAAG---LWAHRLGDQ-RAKRLLFTGDCIT-GAQAAEWGLAVEAPDPADLDARTE-------- 250 (333)
T ss_dssp ECTTCEEECGGGGTTCCCTTC---CHHHHHCHH-HHHHHHTTCCEEE-HHHHHHTTSSSBCCCGGGHHHHHH--------
T ss_pred ECCCCeeechhhceeccCHHH---HHHHHHHHH-HHHHHHhcCCCCC-HHHHHHCCCccEecChHHHHHHHH--------
Confidence 999999999999999999887 478999998 9999999999999 999999999999999988764322
Q ss_pred CChHHHHHHHHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHH
Q 012534 294 EDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCL 373 (461)
Q Consensus 294 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~ 373 (461)
++|+ +|+++||.+++.
T Consensus 251 ------------------------------------------------------------~lA~----~ia~~~~~al~~ 266 (333)
T 3njd_A 251 ------------------------------------------------------------RLVE----RIAAMPVNQLIM 266 (333)
T ss_dssp ------------------------------------------------------------HHHH----HHHTSCHHHHHH
T ss_pred ------------------------------------------------------------HHHH----HHHcCCHHHHHH
Confidence 4444 799999999999
Q ss_pred HHHHHHHHhhhcCCCccccCCHHHH--HHHHHHHHHhh------cCCCcHHHHHHhhhcCCCCCCCCCCCCcc
Q 012534 374 TQKYFSKVASAHGKTDNELSKLSGV--MKYEYRVALRS------SLRSDFAEGVRAVLVDKDQNPKWNPASLE 438 (461)
Q Consensus 374 tk~~l~~~~~~~~~~~~~~~~l~~~--l~~E~~~~~~~------~~s~d~~egv~afl~~K~r~P~w~~~~~~ 438 (461)
+|++++.... ...+... +...+...... +......+|+++|+ +| |.|.|.+....
T Consensus 267 ~K~~l~~~~~--------~~~~~~~~~~~~~~~~~~~~~~e~~~f~~~~~~~g~~a~~-ek-R~~~f~~~~~~ 329 (333)
T 3njd_A 267 AKLACNTALL--------NQGVATSQMVSTVFDGIARHTPEGHAFVATAREHGFREAV-RR-RDEPMGDHGRR 329 (333)
T ss_dssp HHHHHHHHHH--------TTTHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHCHHHHH-HH-HHGGGTCCTTC
T ss_pred HHHHHHHHHH--------hcchhHHHHHHHHHHHHHhcChHHHHHHHHhhhHHHHHHH-Hh-cCCCCCCcccC
Confidence 9999998762 3344433 22222222111 11122379999999 67 89999986543
No 69
>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} PDB: 4hc8_A*
Probab=100.00 E-value=6e-48 Score=370.98 Aligned_cols=227 Identities=18% Similarity=0.151 Sum_probs=199.2
Q ss_pred cceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCC
Q 012534 66 EFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTP 145 (461)
Q Consensus 66 ~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~ 145 (461)
+.|.++. +++|++||||||+ .|+||.+|+.+|.++++.+++| ++|+|||||.| ++||+|+|++++....
T Consensus 5 ~~v~~~~-~~~v~~itlnrp~-~Nal~~~~~~~L~~al~~~~~d-~vr~vvltg~g-~~F~aG~Dl~~~~~~~------- 73 (233)
T 3r6h_A 5 GPVTYTH-DDAIGVIRMDDGK-VNVLGPTMQQALNEAIDAADRD-NVGALVIAGNH-RVFSGGFDLKVLTSGE------- 73 (233)
T ss_dssp CCEEEEE-ETTEEEEEECCSS-SCCCSHHHHHHHHHHHHHHHHH-TCSEEEEECCS-SEEECCSCHHHHC----------
T ss_pred CceEEEE-ECCEEEEEECCCC-CCCCCHHHHHHHHHHHHHHHhC-CCeEEEEECCC-CCccCCcChHHHhccC-------
Confidence 3577887 7999999999995 6999999999999999999987 58999999998 8999999999985421
Q ss_pred CCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEecccc
Q 012534 146 LVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPEN 225 (461)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe~ 225 (461)
......++...+.++.+|.++||||||+|||+|+|||++|+++|||||++++++|++||+
T Consensus 74 --------------------~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~ 133 (233)
T 3r6h_A 74 --------------------AKPAIDMLRGGFELSYRLLSYPKPVVIACTGHAIAMGAFLLCSGDHRVAAHAYNVQANEV 133 (233)
T ss_dssp --------------------CHHHHHHHHHHHHHHHHHHTCSSCEEEEECSEEETHHHHHHTTSSEEEECTTCCEECCGG
T ss_pred --------------------hHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcchHHHHHHHHhCCEEEEeCCcEEECchh
Confidence 011234566667888999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHHHH
Q 012534 226 GIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLA 305 (461)
Q Consensus 226 ~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~l~ 305 (461)
++|++|++|++++|++++|.. +++++++||+.++ |+||+++||||++||++++.+.+.
T Consensus 134 ~~Gl~~~~~g~~~l~~~~g~~-~a~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a~-------------------- 191 (233)
T 3r6h_A 134 AIGMTIPYAAMEVLKLRLTPS-AYQQAAGLAKTFF-GETALAAGFIDEISLPEVVLSRAE-------------------- 191 (233)
T ss_dssp GGTCCCCHHHHHHHHHHSCHH-HHHHHHHSCCEEC-HHHHHHHTSCSEECCGGGHHHHHH--------------------
T ss_pred hhCCCCCccHHHHHHHHhCHH-HHHHHHHcCCcCC-HHHHHHcCCCcEeeCHHHHHHHHH--------------------
Confidence 999999999999999999997 9999999999999 999999999999999988764322
Q ss_pred hhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhc
Q 012534 306 KYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAH 385 (461)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~~~ 385 (461)
+||+ +|+++||.+++.+|++++...
T Consensus 192 ------------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~~~--- 216 (233)
T 3r6h_A 192 ------------------------------------------------EAAR----EFAGLNQQAHNATKLRARAEA--- 216 (233)
T ss_dssp ------------------------------------------------HHHH----HHHTSCHHHHHHHHHHTTHHH---
T ss_pred ------------------------------------------------HHHH----HHHcCCHHHHHHHHHHHHHHH---
Confidence 4444 799999999999999999876
Q ss_pred CCCccccCCHHHHHHHHHHHH
Q 012534 386 GKTDNELSKLSGVMKYEYRVA 406 (461)
Q Consensus 386 ~~~~~~~~~l~~~l~~E~~~~ 406 (461)
..+++++++.|...+
T Consensus 217 ------~~~l~~~l~~e~~~f 231 (233)
T 3r6h_A 217 ------LKAIRAGIDGIEAEF 231 (233)
T ss_dssp ------HHHHHHHHHTSHHHH
T ss_pred ------HhHHHHHHHHHHHHh
Confidence 457899998887764
No 70
>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV}
Probab=100.00 E-value=2.3e-47 Score=366.64 Aligned_cols=225 Identities=20% Similarity=0.193 Sum_probs=198.2
Q ss_pred cceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCC
Q 012534 66 EFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTP 145 (461)
Q Consensus 66 ~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~ 145 (461)
+.|.++. +++|++||||||+ .|+||.+|+.+|.++++.++.|+ |+|||||.| ++||+|+|++++....
T Consensus 6 ~~v~~~~-~~~v~~itlnrp~-~Nal~~~~~~~L~~al~~~~~d~--~~vvltg~g-~~F~aG~Dl~~~~~~~------- 73 (232)
T 3ot6_A 6 DLVSYHL-DDGVATLTLNNGK-VNAISPDVIIAFNAALDQAEKDR--AIVIVTGQP-GILSGGYDLKVMTSSA------- 73 (232)
T ss_dssp HHEEEEE-ETTEEEEEECCTT-TTCBCHHHHHHHHHHHHHHHHTT--CEEEEECBT-EEEECCBCHHHHHHCH-------
T ss_pred cceEEEE-ECCEEEEEECCCC-CCCCCHHHHHHHHHHHHHHhcCC--CEEEEECCC-CCccCCcCHHHHhhCh-------
Confidence 3577887 7999999999996 69999999999999999999874 999999998 8999999999986511
Q ss_pred CCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCC-ceEeccc
Q 012534 146 LVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK-TLLAMPE 224 (461)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~-a~f~~pe 224 (461)
.....++...+.++.+|.++||||||+|||+|+|||++|+++|||||++++ ++|++||
T Consensus 74 ---------------------~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~~a~f~~pe 132 (232)
T 3ot6_A 74 ---------------------EAAINLVAQGSTLARRMLSHPFPIIVACPGHAVAKGAFLLLSADYRIGVAGPFSIGLNE 132 (232)
T ss_dssp ---------------------HHHHHHHHHHHHHHHHHHTCSSCEEEECCEEEETHHHHHHTTSSEEEEECSSCCEECCT
T ss_pred ---------------------HHHHHHHHHHHHHHHHHHcCCCCEEEEECCEeehHHHHHHHHCCEEEEeCCCcEEECcc
Confidence 012235566677889999999999999999999999999999999999998 8999999
Q ss_pred cccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHHH
Q 012534 225 NGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALL 304 (461)
Q Consensus 225 ~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~l 304 (461)
+++|++|++|+++++++++|.. ++++|++||+.|+ |+||+++||||++||++++.+.+.
T Consensus 133 ~~~Gl~p~~~g~~~l~~~ig~~-~a~~l~ltg~~i~-A~eA~~~GLv~~vv~~~~l~~~a~------------------- 191 (232)
T 3ot6_A 133 VQIGMTMHHAGIELARDRLRKS-AFNRSVINAEMFD-PEGAMAAGFLDKVVSVEELQGAAL------------------- 191 (232)
T ss_dssp TTTTCCCCHHHHHHHHHHSCHH-HHHHHHTSCCEEC-HHHHHHHTSCSEEECTTTHHHHHH-------------------
T ss_pred cccCCCCchhHHHHHHHHhCHH-HHHHHHHcCCccC-HHHHHHCCCCCEecCHHHHHHHHH-------------------
Confidence 9999998888899999999997 9999999999999 999999999999999998875322
Q ss_pred HhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhh
Q 012534 305 AKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASA 384 (461)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~~ 384 (461)
++|+ +|+++||.+++.+|++++...
T Consensus 192 -------------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~~~-- 216 (232)
T 3ot6_A 192 -------------------------------------------------AVAA----QLKKINMNAHKKTKLKVRKGL-- 216 (232)
T ss_dssp -------------------------------------------------HHHH----HHTTSCHHHHHHHHHHHHHHH--
T ss_pred -------------------------------------------------HHHH----HHHcCCHHHHHHHHHHHHHHh--
Confidence 4444 799999999999999999876
Q ss_pred cCCCccccCCHHHHHHHHHHHH
Q 012534 385 HGKTDNELSKLSGVMKYEYRVA 406 (461)
Q Consensus 385 ~~~~~~~~~~l~~~l~~E~~~~ 406 (461)
..+++++++.|.+.+
T Consensus 217 -------~~~l~~~l~~E~~~~ 231 (232)
T 3ot6_A 217 -------LDTLDAAIEQDRQHM 231 (232)
T ss_dssp -------HHHHHHHHHHHHHHC
T ss_pred -------HhHHHHHHHHHHHhc
Confidence 457999999988753
No 71
>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A
Probab=100.00 E-value=1.7e-47 Score=372.83 Aligned_cols=236 Identities=16% Similarity=0.203 Sum_probs=202.3
Q ss_pred ccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCC
Q 012534 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNT 144 (461)
Q Consensus 65 ~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~ 144 (461)
++.|.++. +++|++||||||++.|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++... +
T Consensus 15 ~~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~---~--- 86 (257)
T 1szo_A 15 YENIRLER-DGGVLLVTVHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVILTGTG-PSFCNEIDFTSFNLG---T--- 86 (257)
T ss_dssp CTTEEEEE-ETTEEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBT-TBSBCEECGGGSCCS---S---
T ss_pred CceEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCC-CccccCcCchhhhcC---C---
Confidence 45688887 789999999999999999999999999999999999999999999998 899999999986310 0
Q ss_pred CCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEec-c
Q 012534 145 PLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM-P 223 (461)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~-p 223 (461)
......++...+.++.+|.++||||||+|||+|+ ||++|+++|||||++++++|++ |
T Consensus 87 ---------------------~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~-GG~~LalacD~ria~~~a~f~~~p 144 (257)
T 1szo_A 87 ---------------------PHDWDEIIFEGQRLLNNLLSIEVPVIAAVNGPVT-NAPEIPVMSDIVLAAESATFQDGP 144 (257)
T ss_dssp ---------------------HHHHHHHHHHHHHHHHHHHHCCSCEEEEECSCBC-SSTHHHHTSSEEEEETTCEEECTT
T ss_pred ---------------------HHHHHHHHHHHHHHHHHHHcCCCcEEEEECCchH-HHHHHHHHCCEEEEeCCCEEecCc
Confidence 0011123344566788899999999999999999 5999999999999999999999 9
Q ss_pred ccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHH
Q 012534 224 ENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVAL 303 (461)
Q Consensus 224 e~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~ 303 (461)
|+++|++|++|++++|++++|.. ++++|++||+.|+ |+||+++||||+|||++++.+.+.
T Consensus 145 e~~lGl~p~~g~~~~l~r~vG~~-~A~~llltG~~~~-A~eA~~~GLv~~vv~~~~l~~~a~------------------ 204 (257)
T 1szo_A 145 HFPSGIVPGDGAHVVWPHVLGSN-RGRYFLLTGQELD-ARTALDYGAVNEVLSEQELLPRAW------------------ 204 (257)
T ss_dssp SGGGTCCCTTTHHHHHHHHHCHH-HHHHHHHTTCEEE-HHHHHHHTSCSEEECHHHHHHHHH------------------
T ss_pred ccccccCCCccHHHHHHHHcCHH-HHHHHHHcCCCCC-HHHHHHCCCceEEeChHHHHHHHH------------------
Confidence 99999999999999999999997 9999999999999 999999999999998766653221
Q ss_pred HHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 012534 304 LAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVAS 383 (461)
Q Consensus 304 l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~ 383 (461)
++|+ +|+++||.+++.+|++++...
T Consensus 205 --------------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~~~- 229 (257)
T 1szo_A 205 --------------------------------------------------ELAR----GIAEKPLLARRYARKVLTRQL- 229 (257)
T ss_dssp --------------------------------------------------HHHH----HHHTSCHHHHHHHHHHHSHHH-
T ss_pred --------------------------------------------------HHHH----HHHhCCHHHHHHHHHHHHhhh-
Confidence 4444 799999999999999999876
Q ss_pred hcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhc
Q 012534 384 AHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLV 424 (461)
Q Consensus 384 ~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~ 424 (461)
..++.+.++.|... ||+.+|-.
T Consensus 230 --------~~~l~~~l~~~~~~-----------eg~~a~~~ 251 (257)
T 1szo_A 230 --------RRVMEADLSLGLAH-----------EALAAIDL 251 (257)
T ss_dssp --------HHHHHHHHHHHHHH-----------HHHHHHHH
T ss_pred --------hccHHHHHHHHHHH-----------hhhhhhhc
Confidence 34677787776543 78888873
No 72
>3t3w_A Enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A
Probab=100.00 E-value=1.7e-47 Score=377.20 Aligned_cols=254 Identities=19% Similarity=0.232 Sum_probs=201.1
Q ss_pred CCccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcC
Q 012534 63 GAEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDR 142 (461)
Q Consensus 63 ~~~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~ 142 (461)
+.++.|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++........
T Consensus 17 ~~~~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G-~~F~aG~Dl~~~~~~~~~~~ 94 (279)
T 3t3w_A 17 RTEMYIDYDV-SDRIATITLNRPEAANAQNPELLDELDAAWTRAAEDNDVSVIVLRANG-KHFSAGHDLRGGGPVPDKLT 94 (279)
T ss_dssp --CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECS-SCSBCCBCCC--------CC
T ss_pred ccCCeEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCC-CceeeccChHhhhhcccccc
Confidence 3467899987 799999999999999999999999999999999999999999999998 89999999999865321100
Q ss_pred CCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEec
Q 012534 143 NTPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 222 (461)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~ 222 (461)
............+.++.+|.++||||||+|||+|+|||++|+++||+||++++++|++
T Consensus 95 ----------------------~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~ 152 (279)
T 3t3w_A 95 ----------------------LEFIYAHESRRYLEYSLRWRNVPKPSIAAVQGRCISGGLLLCWPCDLIIAAEDALFSD 152 (279)
T ss_dssp ----------------------HHHHHHHHHHHTHHHHHHHHHCSSCEEEEECSEEEGGGHHHHTTSSEEEEETTCEEEC
T ss_pred ----------------------hHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeEhHHHHHHHHhCCEEEecCCCEEeC
Confidence 0011112233445677889999999999999999999999999999999999999999
Q ss_pred cccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHH
Q 012534 223 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA 302 (461)
Q Consensus 223 pe~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~ 302 (461)
||+++|+ |++|+..+ ++++|.. ++++|++||+.++ |+||+++||||+|||++++.+.+.
T Consensus 153 pe~~~Gl-~~~~~~~~-~~~vG~~-~A~~llltG~~i~-A~eA~~~GLv~~vv~~~~l~~~a~----------------- 211 (279)
T 3t3w_A 153 PVVLMDI-GGVEYHGH-TWELGPR-KAKEILFTGRAMT-AEEVAQTGMVNRVVPRDRLDAETR----------------- 211 (279)
T ss_dssp CGGGGTC-SSCSSCCH-HHHHCHH-HHHHHHHHCCCEE-HHHHHHHTSCSEEECGGGHHHHHH-----------------
T ss_pred cHHhcCC-CCchHHHH-HhhcCHH-HHHHHHHcCCccC-HHHHHHCCCCcEeeChHHHHHHHH-----------------
Confidence 9999999 44544444 8999998 9999999999999 999999999999999988764322
Q ss_pred HHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 012534 303 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 382 (461)
Q Consensus 303 ~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~ 382 (461)
+||+ +|+++||.+++.+|++++...
T Consensus 212 ---------------------------------------------------~~a~----~la~~~~~a~~~~K~~l~~~~ 236 (279)
T 3t3w_A 212 ---------------------------------------------------ALAG----EIAKMPPFALRQAKRAVNQTL 236 (279)
T ss_dssp ---------------------------------------------------HHHH----HHHTSCHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------------------HHHH----HHHcCCHHHHHHHHHHHHHhh
Confidence 4444 799999999999999999876
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCC
Q 012534 383 SAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNP 434 (461)
Q Consensus 383 ~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~ 434 (461)
....+.++++.++.. .++.|+. +|.. . ..|.+++
T Consensus 237 --------~~~~~~~~~~~~~~~-------~~~~~~~-~~~~-~-~~~~~~~ 270 (279)
T 3t3w_A 237 --------DVQGFYAAIQSVFDI-------HQTGHGN-AMSV-S-GWPVLVD 270 (279)
T ss_dssp --------HHTTHHHHHHHHHHH-------HHHHHHH-HHHH-T-SSCC---
T ss_pred --------hcccHHHHHHHHhhH-------HHHHHHH-HHHh-c-CCccccC
Confidence 245788888777765 4456666 5553 2 4665554
No 73
>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A*
Probab=100.00 E-value=2.4e-47 Score=394.41 Aligned_cols=249 Identities=18% Similarity=0.181 Sum_probs=201.1
Q ss_pred ccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEec--------CCCccccCCChhhHHH
Q 012534 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGS--------GPRAFCAGMDIKGVVA 136 (461)
Q Consensus 65 ~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~--------G~~~FcaG~Dl~~~~~ 136 (461)
++.|.++. +++|++||||||+++|+||.+|+.+|.++|+.++.|++||+|||||. |+++||+|+||+++..
T Consensus 166 ~~~v~~e~-~~gVa~ItLNRP~k~NALs~~m~~eL~~al~~~~~D~~VRvVVLtG~~~~~p~~aG~~~FcAG~DL~~~~~ 244 (440)
T 2np9_A 166 MEAVHLER-RDGVARLTMCRDDRLNAEDGQQVDDMETAVDLALLDPGVRVGLLRGGVMSHPRYRGKRVFSAGINLKYLSQ 244 (440)
T ss_dssp CSSEEEEE-ETTEEEEEECCTTTTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECBCCSTTTTTCBCCBCCBCHHHHHT
T ss_pred CceEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCccccccCCCccccCCcchhhhhc
Confidence 45688887 78999999999999999999999999999999999999999999995 5579999999998753
Q ss_pred HhhhcCCCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHH------------hhCCCcEEEEeCCccchhhhH
Q 012534 137 EIQKDRNTPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKI------------SEYKKPYISLMDGVTMGFGIG 204 (461)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------------~~~~kPvIAavnG~a~GgG~~ 204 (461)
... .. .. . .....+.....++..+ .++||||||+|||+|+|||++
T Consensus 245 ~~~---~~--~~----------------~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~pkPvIAAVnG~A~GGG~e 301 (440)
T 2np9_A 245 GGI---SL--VD----------------F--LMRRELGYIHKLVRGVLTNDDRPGWWHSPRIEKPWVAAVDGFAIGGGAQ 301 (440)
T ss_dssp TCC---CT--TT----------------T--HHHHHHTHHHHHHHCEECCSCSTTTTTCCEECCCEEEEECSEEETHHHH
T ss_pred cCc---ch--hh----------------h--hhHHHHHHHHHHHHHHHhhcccchhhhhhcCCCCEEEEECCcccccchH
Confidence 110 00 00 0 0000111122333333 479999999999999999999
Q ss_pred hhhcCCeEEEcCCceEeccccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHH
Q 012534 205 ISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLK 284 (461)
Q Consensus 205 LalacD~ria~e~a~f~~pe~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~ 284 (461)
|+++|||||++++++|++||+++|++|++| +++|++++|.. ++++|+|||+.|+ |+||+++||||+|||++++.+.+
T Consensus 302 LALaCDirIAae~A~Fglpev~lGl~P~~g-~~~L~rlvG~~-~A~ellLtG~~i~-A~EA~~~GLV~~Vvp~~eL~~~a 378 (440)
T 2np9_A 302 LLLVFDRVLASSDAYFSLPAAKEGIIPGAA-NLRLGRFAGPR-VSRQVILEGRRIW-AKEPEARLLVDEVVEPDELDAAI 378 (440)
T ss_dssp HGGGCSEEEEETTCEEECCCTTTCCCCTTH-HHHHHHHHHHH-HHHHHHHHCCCEE-TTSGGGGGTCSEEECHHHHHHHH
T ss_pred HHhhCCEEEEcCCCEEECchhccCcCcchH-HHHHHHHhhHH-HHHHHHHcCCCCC-HHHHHHCCCCcEecChHHHHHHH
Confidence 999999999999999999999999999887 68999999997 9999999999999 99999999999999977665322
Q ss_pred HHHHhcccCCChHHHHHHHHHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHh
Q 012534 285 EALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMG 364 (461)
Q Consensus 285 ~ala~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~ 364 (461)
. ++++ +|
T Consensus 379 ~--------------------------------------------------------------------~~A~----~l- 385 (440)
T 2np9_A 379 E--------------------------------------------------------------------RSLT----RL- 385 (440)
T ss_dssp H--------------------------------------------------------------------HHHH----TT-
T ss_pred H--------------------------------------------------------------------HHHH----Hh-
Confidence 2 3333 33
Q ss_pred cCCchHHHHHHHHHHHHhhhcCCCccccCCH---HHHHHHHHHHHHhhcCCCcHHHHHHhhhcCC
Q 012534 365 KGAPFSLCLTQKYFSKVASAHGKTDNELSKL---SGVMKYEYRVALRSSLRSDFAEGVRAVLVDK 426 (461)
Q Consensus 365 ~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l---~~~l~~E~~~~~~~~~s~d~~egv~afl~~K 426 (461)
++.+++.+|++++... . .+ .+.+..|...+..++.++|++||+++|+ +|
T Consensus 386 --a~~Av~~~K~~l~~~~---------~-~~~~~~~~l~~e~~~~~~~~~s~D~~Egv~AFl-eK 437 (440)
T 2np9_A 386 --DGDAVLANRRMLNLAD---------E-SPDGFRAYMAEFALMQALRLYGHDVIDKVGRFG-GR 437 (440)
T ss_dssp --CSHHHHHHHHHHHHHH---------S-CHHHHHHHHHHHHHHHHHHHTCHHHHHHHHTCC---
T ss_pred --CHHHHHHHHHHHHhhh---------c-chhHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH-hC
Confidence 5789999999999865 2 33 3566667777778889999999999999 66
No 74
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=100.00 E-value=1.1e-45 Score=405.87 Aligned_cols=267 Identities=22% Similarity=0.241 Sum_probs=210.0
Q ss_pred ecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCCCCCCCC
Q 012534 73 HPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVPL 152 (461)
Q Consensus 73 ~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~ 152 (461)
.+|+|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||||+| ++||+|+||+++......
T Consensus 27 ~~~~Va~itlnrP~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aGaDl~~~~~~~~~------------ 92 (742)
T 3zwc_A 27 LPHSLAMIRLCNPP-VNAVSPTVIREVRNGLQKAGSDHTVKAIVICGAN-GNFCAGADIHGFSAFTPG------------ 92 (742)
T ss_dssp CSTTEEEEEECCTT-TTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEEST-TCSBCCBCSSSCCSSCSC------------
T ss_pred eeCCEEEEEeCCCc-ccCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCC-CccccCcChHhhhccChh------------
Confidence 37999999999998 5999999999999999999999999999999998 899999999987431100
Q ss_pred CCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEeccccccCCCCC
Q 012534 153 KCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPD 232 (461)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~lGl~P~ 232 (461)
.....++.+|.+++|||||+|||+|+|||++|+++||||||+++++|++||+++|++|+
T Consensus 93 ---------------------~~~~~~~~~i~~~~kPvIAai~G~a~GGG~elalacD~ria~~~a~fg~pev~lGl~Pg 151 (742)
T 3zwc_A 93 ---------------------LALGSLVDEIQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLPEVTLGILPG 151 (742)
T ss_dssp ---------------------SHHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCT
T ss_pred ---------------------HHHHHHHHHHHhCCCCEEEEECccchHHHHHHHHhcCEEEEcCCCEEECcccCcccCCC
Confidence 01234667899999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHHHHhhcCCCC
Q 012534 233 VGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPE 312 (461)
Q Consensus 233 ~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~l~~~~~~~~ 312 (461)
+|++++|+|++|.. +|++|++||+.++ |+||+++||||+|+|++.+ +.+.++++..... +.
T Consensus 152 ~ggt~rL~rlvG~~-~A~~l~ltG~~i~-a~eA~~~GLv~~vv~~d~~-~~A~~~A~~ia~~----------------~~ 212 (742)
T 3zwc_A 152 ARGTQLLPRVVGVP-VALDLITSGKYLS-ADEALRLGILDAVVKSDPV-EEAIKFAQKIIDK----------------PI 212 (742)
T ss_dssp TTHHHHHHHHHCHH-HHHHHHHHCCCEE-HHHHHHHTSCSEEESSCHH-HHHHHHHHHHTTS----------------CS
T ss_pred ccHHHHHHHhhhHH-HHHHHHHcCCchh-HHHHHHcCCccEecCchhh-HHHHHHHHHHhcC----------------Cc
Confidence 99999999999998 9999999999999 9999999999999997654 3444454432111 11
Q ss_pred CCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhhcCCCcccc
Q 012534 313 GEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNEL 392 (461)
Q Consensus 313 ~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~ 392 (461)
....... +..........++ ..+....++ ....+.|...+++.++.+. .
T Consensus 213 ~~~~~~~------~~~~~~~~~~~~~---------------~~~~~~~~k-~~~~~~A~~~~~~~v~~~~---------~ 261 (742)
T 3zwc_A 213 EPRRIFN------KPVPSLPNMDSVF---------------AEAIAKVRK-QYPGVLAPETCVRSIQASV---------K 261 (742)
T ss_dssp GGGCGGG------SCCCCCTTHHHHH---------------HHHHHHHHH-HSTTCHHHHHHHHHHHHHH---------H
T ss_pred hhhhhhc------ccccccchhhhhH---------------HHHHHHHhh-hccchhHHHHHHHHHHHHh---------h
Confidence 0000000 0000000001000 111111111 1334579999999999887 6
Q ss_pred CCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhc
Q 012534 393 SKLSGVMKYEYRVALRSSLRSDFAEGVRAVLV 424 (461)
Q Consensus 393 ~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~ 424 (461)
.+++++++.|.+.+..++.+++.++++++|+.
T Consensus 262 ~~~~~gl~~E~~~F~~l~~s~~~k~~~~aFf~ 293 (742)
T 3zwc_A 262 HPYEVGIKEEEKLFMYLRASGQAKALQYAFFA 293 (742)
T ss_dssp SCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 79999999999999999999999999999995
No 75
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=100.00 E-value=1.3e-45 Score=406.42 Aligned_cols=296 Identities=19% Similarity=0.188 Sum_probs=226.9
Q ss_pred CccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCC
Q 012534 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRN 143 (461)
Q Consensus 64 ~~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~ 143 (461)
++..+.++..+++|++|||||| +.|+||.+|+.+|.++++.++.|+++|+||||| |+++||+|+||+++.......
T Consensus 5 ~~~~i~~~~~~~~va~itlnrp-~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg-g~~~F~aG~Dl~~~~~~~~~~-- 80 (725)
T 2wtb_A 5 TKGKTVMEVGGDGVAVITLINP-PVNSLSFDVLYNLKSNYEEALSRNDVKAIVITG-AKGRFSGGFDISGFGEMQKGN-- 80 (725)
T ss_dssp --CEEEEEECTTSEEEEEEECT-TTTCCCHHHHHHHHHHHHHHTTCTTCCEEEEEE-SSSCCBCSSCC------------
T ss_pred cCCeEEEEEeeCCEEEEEECCC-CCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEC-CCCcccCCcCHHHHhcccchh--
Confidence 4566888734789999999999 789999999999999999999999999999999 745999999999885321000
Q ss_pred CCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEecc
Q 012534 144 TPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMP 223 (461)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~p 223 (461)
..... .+....+.++.+|.++||||||+|||+|+|||++|+++||||||+++++|++|
T Consensus 81 ~~~~~----------------------~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~elalacD~ria~~~a~fglp 138 (725)
T 2wtb_A 81 VKEPK----------------------AGYISIDIITDLLEAARKPSVAAIDGLALGGGLELAMACHARISAPAAQLGLP 138 (725)
T ss_dssp --CCS----------------------SSHHHHHCCCCCCCTSSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECC
T ss_pred hhhHH----------------------HHHHHHHHHHHHHHhCcCcEEEEECCccCcccHHHHHhCCEEEEcCCCEEeCc
Confidence 00000 02233445666789999999999999999999999999999999999999999
Q ss_pred ccccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCChHHHHHHH
Q 012534 224 ENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVAL 303 (461)
Q Consensus 224 e~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~~~~~~~~~ 303 (461)
|+++|++|++|++++|+|++|.. +|++|++||+.++ |+||+++||||++||++++.+.+.+++...
T Consensus 139 ev~lGl~P~~Ggt~~L~rlvG~~-~A~~l~ltG~~~~-a~eA~~~GLv~~vv~~~~l~~~a~~~a~~l------------ 204 (725)
T 2wtb_A 139 ELQLGVIPGFGGTQRLPRLVGLT-KALEMILTSKPVK-AEEGHSLGLIDAVVPPAELVTTARRWALDI------------ 204 (725)
T ss_dssp GGGGTCCCCSSHHHHHHHHHCHH-HHHHHHHHCCCEE-HHHHHHHTSCSEECCTTTHHHHHHHHHHHH------------
T ss_pred hhccCCCCCccHHHHHHHhcCHH-HHHHHHHcCCCCC-HHHHHHCCccceEcChhHHHHHHHHHHHHH------------
Confidence 99999999999999999999997 9999999999999 999999999999999999988777665431
Q ss_pred HHhhcCCCCC-CchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh
Q 012534 304 LAKYSSDPEG-EAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 382 (461)
Q Consensus 304 l~~~~~~~~~-~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~ 382 (461)
.... .|.. ........ + ......+ +-+++++.+++..+.. .|...+|++++.+.
T Consensus 205 a~~~--~p~~~~~~~~~~~---------~-~~~~~~~------------~~~~a~~~~~~~~~g~-pA~~~~k~~~~~~~ 259 (725)
T 2wtb_A 205 VGRR--KPWVSSVSKTDKL---------P-PLGEARE------------ILTFAKAQTLKRAPNM-KHPLMCLDAIEVGI 259 (725)
T ss_dssp HTTS--SCCCCGGGCCTTS---------C-CHHHHHH------------HHHHHHHHHHHHCTTC-CHHHHHHHHHHHHH
T ss_pred HhcC--CChhhhhhhcccc---------C-ccchHHH------------HHHHHHHHHHHhccCC-cHHHHHHHHHHHhc
Confidence 1110 0110 00000000 0 0000000 1256777777787874 57788999999876
Q ss_pred hhcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCCCCC
Q 012534 383 SAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPA 435 (461)
Q Consensus 383 ~~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w~~~ 435 (461)
..+++++++.|.+.+..++.++|+++++++|+ +| |.|++.+.
T Consensus 260 ---------~~~~~~~l~~E~~~~~~l~~s~~~~~~~~aF~-~k-r~~~~~~~ 301 (725)
T 2wtb_A 260 ---------VSGPRAGLEKEAEVASQVVKLDTTKGLIHVFF-SQ-RGTAKVPG 301 (725)
T ss_dssp ---------HSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHH-HH-HGGGCCTT
T ss_pred ---------cCCHHHHHHHHHHHHHHHhcchhHHHHHHHhh-hh-hhhcccCC
Confidence 56899999999999999999999999999999 56 77776654
No 76
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=100.00 E-value=1.9e-44 Score=396.96 Aligned_cols=295 Identities=16% Similarity=0.174 Sum_probs=230.2
Q ss_pred cceEEEEecCcEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCC
Q 012534 66 EFVKGNVHPNGVAVITLDRPK-ALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNT 144 (461)
Q Consensus 66 ~~i~~~~~~~~V~~ItLnrP~-~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~ 144 (461)
+.+.++..+++|++||||||+ +.|+||.+|+.+|.++++.++.|+++|+||||| |+++||+|+||+++.......
T Consensus 6 ~~i~~~~~~~~va~itlnrp~~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg-g~~~F~aG~Dl~~~~~~~~~~--- 81 (715)
T 1wdk_A 6 KAITVTALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSS-GKDVFIVGADITEFVENFKLP--- 81 (715)
T ss_dssp SSEEEEECGGGEEEEEECCTTSSSCBCCHHHHHHHHHHHHHHHHCTTCCEEEEEE-SSSSSBBCCCHHHHHHHTTSC---
T ss_pred CeEEEEEeeCCEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEC-CCCeEeCCcCHHHHhhcccCC---
Confidence 457777337899999999998 899999999999999999999999999999999 745999999999986421100
Q ss_pred CCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEeccc
Q 012534 145 PLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPE 224 (461)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe 224 (461)
......+....+.++.+|.++||||||+|||+|+|||++|+++||||||+++++|++||
T Consensus 82 ---------------------~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~elalacD~ria~~~a~fglpe 140 (715)
T 1wdk_A 82 ---------------------DAELIAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLEMCLAADFRVMADSAKIGLPE 140 (715)
T ss_dssp ---------------------HHHHHHHHHHHHHHHHHHHTCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECGG
T ss_pred ---------------------HHHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeeHHHHHHHHHCCEEEEeCCCEEeChh
Confidence 00112234455678889999999999999999999999999999999999999999999
Q ss_pred cccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCC-hHHHHHHH
Q 012534 225 NGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSED-PHQDIVAL 303 (461)
Q Consensus 225 ~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~ala~~~~~~~-~~~~~~~~ 303 (461)
+++|++|++|++++|+|++|.. +|++|++||+.++ |+||+++||||++||++++.+.+.+++....... |. ....
T Consensus 141 v~lGl~P~~ggt~~L~r~vG~~-~A~~l~ltG~~~~-a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~~-~~~~- 216 (715)
T 1wdk_A 141 VKLGIYPGFGGTVRLPRLIGVD-NAVEWIASGKENR-AEDALKVSAVDAVVTADKLGAAALDLIKRAISGELDY-KAKR- 216 (715)
T ss_dssp GGGTCCCCSSHHHHHHHHHCHH-HHHHHHHHCCCEE-HHHHHHTTSSSEEECGGGHHHHHHHHHHHHHTTSSCH-HHHH-
T ss_pred hccCCCCCccHHHHHHHHhCHH-HHHHHHHcCCCCC-HHHHHHCCCceEEeChHHHHHHHHHHHHHHhhccCCc-chhc-
Confidence 9999999999999999999998 9999999999999 9999999999999999999887777765421110 10 0000
Q ss_pred HHhhcCCCCCCchhhhchhHHHhhcCCCccHHHHHHHHHhcccccchhHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhh
Q 012534 304 LAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVAS 383 (461)
Q Consensus 304 l~~~~~~~~~~~~~~~~~~~i~~~F~~~~s~~~i~~~l~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~tk~~l~~~~~ 383 (461)
+....|...... ..... -..+++.+.+-..+...|...+|++++.+.
T Consensus 217 --~~~~~p~~~~~~---------------~~~~~---------------~~~~k~~~~~~~~g~~~A~~~~k~~v~~~~- 263 (715)
T 1wdk_A 217 --QPKLEKLKLNAI---------------EQMMA---------------FETAKGFVAGQAGPNYPAPVEAIKTIQKAA- 263 (715)
T ss_dssp --GGGGSCCSCCHH---------------HHHHH---------------HHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-
T ss_pred --ccccCccccCch---------------hHHHH---------------HHHHHHHHHHhcccCCchHHHHHHHHHHHh-
Confidence 000000000000 00000 123343444555666778999999999876
Q ss_pred hcCCCccccCCHHHHHHHHHHHHHhhcCCCcHHHHHHhhhcCCCCCCCC
Q 012534 384 AHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKW 432 (461)
Q Consensus 384 ~~~~~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egv~afl~~K~r~P~w 432 (461)
..++.++++.|.+.+..++.++|+++++++|+ +| |.|+.
T Consensus 264 --------~~~~~~~l~~E~~~~~~l~~s~~~~~~~~aF~-~k-r~~~~ 302 (715)
T 1wdk_A 264 --------NFGRDKALEVEAAGFAKLAKTSASNCLIGLFL-ND-QELKK 302 (715)
T ss_dssp --------TCCHHHHHHHHHHHHHHHHTSHHHHHHHHHHH-HH-HHHHH
T ss_pred --------cCCHHHHHHHHHHHHHHHhcchhHHHHHHHHH-hh-hhhhc
Confidence 56899999999999999999999999999999 56 66654
No 77
>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}
Probab=100.00 E-value=2.9e-41 Score=352.16 Aligned_cols=188 Identities=15% Similarity=0.201 Sum_probs=167.5
Q ss_pred CccceEEEEecCcEEEEEEcCCC----------CCCCCCHHHHHHHHHHHHHHhcC-CCceEEEEEe-cCCCccccCCCh
Q 012534 64 AEEFVKGNVHPNGVAVITLDRPK----------ALNAMNLDMDIKYKSFLDEWESD-PRVKCVLIEG-SGPRAFCAGMDI 131 (461)
Q Consensus 64 ~~~~i~~~~~~~~V~~ItLnrP~----------~~Nal~~~m~~eL~~~l~~~~~d-~~vr~vVltg-~G~~~FcaG~Dl 131 (461)
.++.+.++. +++|++|+||||+ ++|+||.+|+.+|.++++.++.| +++|+||||| .| ++||+|+|+
T Consensus 19 ~~~~v~ve~-~ggVA~ITLNRPed~~l~~g~~~k~NALs~~ml~eL~~AL~~~~~D~~~VRaVVLTGa~G-~~FcAGaDL 96 (556)
T 2w3p_A 19 QYKHWKLSF-NGPVATLGIDIAEDGGIRDGYKLKLNSYDLGVDIELHDAIQRIRFEHPEVRTVVLTSLKD-RVFCSGANI 96 (556)
T ss_dssp GCSSEEEEE-ETTEEEEEECCCTTCCSSSSCCCCTTEECHHHHHHHHHHHHHHHHHCTTCCEEEEEESSS-SEEECEECH
T ss_pred cCceEEEEe-eCCEEEEEEecccccccccccCCCCCCCCHHHHHHHHHHHHHHHhCCCCceEEEEeCCCC-CcccCCcCH
Confidence 456788887 7899999999998 89999999999999999999999 9999999999 76 899999999
Q ss_pred hhHHHHhhhcCCCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHH----hhCCCcEEEEeCCccchhhhHhhh
Q 012534 132 KGVVAEIQKDRNTPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKI----SEYKKPYISLMDGVTMGFGIGISG 207 (461)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~kPvIAavnG~a~GgG~~Lal 207 (461)
+++...... ....+....+.++..| .++||||||+|||+|+|||++|++
T Consensus 97 ~el~~~~~~---------------------------~~~~~~~~~~~l~~~L~~a~~~~pKPVIAAVnG~AlGGGleLAL 149 (556)
T 2w3p_A 97 FMLGLSTHA---------------------------WKVNFCKFTNETRNGLEDSSRHSGLKFLAAVNGACAGGGYELAL 149 (556)
T ss_dssp HHHHHSCHH---------------------------HHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECSEEETHHHHHHH
T ss_pred HHHhhcccH---------------------------HHHHHHHHHHHHHHHHHHHHhcCCCCEEEEECCeechhhHHHHH
Confidence 998642100 0112334445677788 999999999999999999999999
Q ss_pred cCCeEEEcCC--ceEeccccc-cCCCCCchHHHHHh--cCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHH
Q 012534 208 HGRYRIVTEK--TLLAMPENG-IGLFPDVGFSYIAA--KGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGS 282 (461)
Q Consensus 208 acD~ria~e~--a~f~~pe~~-lGl~P~~G~~~~L~--rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~ 282 (461)
+|||||++++ ++|++||++ +|++|++|++++|+ +++|.. ++++|++||+.|+ |+||+++||||+|||++++.+
T Consensus 150 ACD~rIAse~~~A~FglPEv~~LGL~Pg~Ggt~rLp~~RlVG~~-rA~eLlLTGr~is-A~EAl~lGLVdeVVp~~eL~~ 227 (556)
T 2w3p_A 150 ACDEIYLVDDRSSSVSLPEVPLLGVLPGTGGLTRVTDKRKVRHD-RADIFCTVVEGVR-GERAKAWRLVDEVVKPNQFDQ 227 (556)
T ss_dssp HSSEEEEECSSSCEEECCHHHHHSSCCTTTHHHHHHHTSCCCHH-HHHHHTTCSSCEE-HHHHHHTTSCSEEECHHHHHH
T ss_pred hCCEEEEcCCCCcEEecccccccCCCCCccHHHHHHhhccCCHH-HHHHHHHcCCCCC-HHHHHHCCCceEEeChhHHHH
Confidence 9999999999 999999999 99999999999999 999997 9999999999999 999999999999998777654
No 78
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=99.84 E-value=3e-22 Score=216.01 Aligned_cols=169 Identities=15% Similarity=0.078 Sum_probs=141.2
Q ss_pred cCcEEEEEEcCCCCCCC--CCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCCCCCCC
Q 012534 74 PNGVAVITLDRPKALNA--MNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVP 151 (461)
Q Consensus 74 ~~~V~~ItLnrP~~~Na--l~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~ 151 (461)
+++|++|+||+|.+.|+ ++..+.++|.++|+.++.|+++|+|||++.+ .|+|+....
T Consensus 300 ~~~VavI~l~g~i~~n~~~~~~~~~~~l~~~L~~a~~d~~vkaVVL~i~s-----pGG~~~~~~---------------- 358 (593)
T 3bf0_A 300 GDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNS-----PGGSVTASE---------------- 358 (593)
T ss_dssp SCEEEEEEEEEEEESSSSCTTSEEHHHHHHHHHHHHHCTTEEEEEEEEEE-----EEECHHHHH----------------
T ss_pred CCCEEEEEEeeeecCCccccchhHHHHHHHHHHHHHhCCCCCEEEEEecC-----CCCCHHHHH----------------
Confidence 57899999999998898 7899999999999999999999999999975 377776421
Q ss_pred CCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEecccc------
Q 012534 152 LKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPEN------ 225 (461)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe~------ 225 (461)
.+++.+.++..++|||||+|+|+|.|||+.|+++||+|||++++.|+.+++
T Consensus 359 -----------------------~i~~~i~~l~~~~kPVia~v~g~AasgG~~iA~aaD~iva~p~a~~Gsigv~~~~~~ 415 (593)
T 3bf0_A 359 -----------------------VIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITT 415 (593)
T ss_dssp -----------------------HHHHHHHHHHHTTCCEEEEEEEEEETHHHHTTTTCSEEEECTTCEEECCCEEEEEEE
T ss_pred -----------------------HHHHHHHHHHhCCCCEEEEECCChHHHHHHHHHhCCEEEECCCCEeecceeEEecCc
Confidence 123455677889999999999999999999999999999999999999875
Q ss_pred ------ccCCCCCc-------------hHH---------------HHHhcCCCchHH-----HHHHhhcCCCCCcHHHHH
Q 012534 226 ------GIGLFPDV-------------GFS---------------YIAAKGPGGGSV-----GAYLGMTGKRISTPSDAL 266 (461)
Q Consensus 226 ------~lGl~P~~-------------G~~---------------~~L~rlvG~~~~-----a~~l~LtG~~i~~A~eA~ 266 (461)
++|+.|+. +++ ..+.+.+|.. + +.+++++|+.|+ |+||+
T Consensus 416 ~~~~~~klGi~~~~~~~g~~k~~~~~~~~t~~~~~~l~~~l~~~~~~f~~~V~~~-Rg~~~~a~~~l~~G~~~t-a~eA~ 493 (593)
T 3bf0_A 416 VENSLDSIGVHTDGVSTSPLADVSITRALPPEAQLMMQLSIENGYKRFITLVADA-RHSTPEQIDKIAQGHVWT-GQDAK 493 (593)
T ss_dssp CHHHHHHTTCEEECCBSCGGGCCCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHH-TTCCHHHHHTTCTTCEEE-HHHHH
T ss_pred hHHHHHhcCceeeeeecccccccCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhcCCCcC-HHHHH
Confidence 68987643 222 4566667665 6 889999999999 99999
Q ss_pred HcCccceecCCCChHHHHHHHH
Q 012534 267 FAGLGTDYVPSGNLGSLKEALL 288 (461)
Q Consensus 267 ~~GLv~~vv~~~~l~~~~~ala 288 (461)
++||||++++.+++.+.+.+++
T Consensus 494 ~~GLVD~v~~~~~~~~~a~~~a 515 (593)
T 3bf0_A 494 ANGLVDSLGDFDDAVAKAAELA 515 (593)
T ss_dssp HHTSCSEECCHHHHHHHHHHHS
T ss_pred HCCCCcCccCHHHHHHHHHHHc
Confidence 9999999998777766555543
No 79
>3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis}
Probab=99.80 E-value=3.5e-19 Score=171.36 Aligned_cols=168 Identities=15% Similarity=0.050 Sum_probs=126.7
Q ss_pred cCcEEEEEEcCCCCCCCCCHH-------HHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCC
Q 012534 74 PNGVAVITLDRPKALNAMNLD-------MDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPL 146 (461)
Q Consensus 74 ~~~V~~ItLnrP~~~Nal~~~-------m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~ 146 (461)
+++|++|.++.+=..+.-... .+.+|.++|+.+..|+++|+|||++. |.|+|+.....
T Consensus 2 ~~~iavi~i~G~I~~~~~~~~~~~~~~~~~~~l~~~l~~a~~d~~v~~ivL~~~-----s~Gg~~~~~~~---------- 66 (240)
T 3rst_A 2 SSKIAVLEVSGTIQDNGDSSSLLGADGYNHRTFLKNLERAKDDKTVKGIVLKVN-----SPGGGVYESAE---------- 66 (240)
T ss_dssp CCEEEEEEEESCBCCC---------CCCCHHHHHHHHHHHHHCTTEEEEEEEEE-----ECCBCHHHHHH----------
T ss_pred CCeEEEEEEEEEEcCCCCcCcccccCCcCHHHHHHHHHHHHhCCCcEEEEEEec-----CCCCCHHHHHH----------
Confidence 577999999876332210111 36899999999999999999999986 46888865321
Q ss_pred CCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhh-CCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEecc--
Q 012534 147 VPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISE-YKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMP-- 223 (461)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~p-- 223 (461)
+++.+..+.. ++|||||+|+|+|.|||+.|+++||+||+++++.|+.+
T Consensus 67 -----------------------------i~~~l~~~~~~~~kPVia~v~g~a~~gG~~lA~a~D~i~a~~~a~~g~~Gv 117 (240)
T 3rst_A 67 -----------------------------IHKKLEEIKKETKKPIYVSMGSMAASGGYYISTAADKIFATPETLTGSLGV 117 (240)
T ss_dssp -----------------------------HHHHHHHHHHHHCCCEEEEEEEEEETHHHHHHTTSSEEEECTTCEEECCCC
T ss_pred -----------------------------HHHHHHHHHHhCCCeEEEEECCeehHhHHHHHHhCCeeEECCCCeEeccce
Confidence 2334556666 89999999999999999999999999999999999999
Q ss_pred -------------------ccccCCCCCchHH--------------------------HHHhcCCCchHHHHHHhhcCCC
Q 012534 224 -------------------ENGIGLFPDVGFS--------------------------YIAAKGPGGGSVGAYLGMTGKR 258 (461)
Q Consensus 224 -------------------e~~lGl~P~~G~~--------------------------~~L~rlvG~~~~a~~l~LtG~~ 258 (461)
+++.|-+++.+.. ..-.|-+... ..+.+++|+.
T Consensus 118 ~~~~~~~~~~l~k~Gi~~~~~~~G~~k~~~~p~~~~s~~~~~~~~~~l~~~~~~f~~~Va~~R~l~~~--~~~~~~~g~~ 195 (240)
T 3rst_A 118 IMESVNYSKLADKLGISFETIKSGAHADIMSPSREMTKEEKNIMQSMVDNSYEGFVDVISKGRGMPKA--EVKKIADGRV 195 (240)
T ss_dssp EEEEEECHHHHHHHTCEEEEEESSTTTTTTCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHH--HHHHHCSSCE
T ss_pred eeEecCHHHHHHHcCCeEEEEeccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHH--HHHHHhcCCc
Confidence 6677777776622 2233444533 3344789999
Q ss_pred CCcHHHHHHcCccceecCCCChHHHHHHHH
Q 012534 259 ISTPSDALFAGLGTDYVPSGNLGSLKEALL 288 (461)
Q Consensus 259 i~~A~eA~~~GLv~~vv~~~~l~~~~~ala 288 (461)
++ |++|+++||||++.+.+++.+.+.+++
T Consensus 196 ~~-a~~A~~~GLVD~i~~~~~~~~~~~~~~ 224 (240)
T 3rst_A 196 YD-GRQAKKLNLVDELGFYDDTITAMKKDH 224 (240)
T ss_dssp EE-HHHHHHTTSSSEECCHHHHHHHHHHHC
T ss_pred cc-HHHHHHcCCCcccCCHHHHHHHHHHHh
Confidence 99 999999999999998777665444443
No 80
>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A
Probab=99.77 E-value=1.8e-18 Score=164.66 Aligned_cols=148 Identities=16% Similarity=0.161 Sum_probs=124.2
Q ss_pred cCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCCCCCCCCC
Q 012534 74 PNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVPLK 153 (461)
Q Consensus 74 ~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~ 153 (461)
.+.|++|+++ |+++..+.+.|.++|+.++++ ++++|||+.. |.|+|+....
T Consensus 7 ~~~V~vI~i~-----g~I~~~~~~~l~~~l~~a~~~-~~~~Ivl~in-----spGG~v~~~~------------------ 57 (230)
T 3viv_A 7 KNIVYVAQIK-----GQITSYTYDQFDRYITIAEQD-NAEAIIIELD-----TPGGRADAMM------------------ 57 (230)
T ss_dssp CCEEEEEEEE-----SCBCHHHHHHHHHHHHHHHHT-TCSEEEEEEE-----BSCEEHHHHH------------------
T ss_pred CCeEEEEEEe-----CEECHHHHHHHHHHHHHHhcC-CCCEEEEEEe-----CCCcCHHHHH------------------
Confidence 4679999998 479999999999999999875 6999999875 5677765432
Q ss_pred CCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEe---CCccchhhhHhhhcCCeEEEcCCceEeccccccCCC
Q 012534 154 CGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLM---DGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLF 230 (461)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav---nG~a~GgG~~LalacD~ria~e~a~f~~pe~~lGl~ 230 (461)
.++..|..++||||++| +|+|.|+|+.|+++||+++|.++++|+.+++..++
T Consensus 58 ------------------------~i~~~i~~~~~PVia~v~p~~G~AasaG~~ia~a~d~~~a~p~a~ig~~~p~~~~- 112 (230)
T 3viv_A 58 ------------------------NIVQRIQQSKIPVIIYVYPPGASAASAGTYIALGSHLIAMAPGTSIGACRPILGY- 112 (230)
T ss_dssp ------------------------HHHHHHHTCSSCEEEEECSTTCEEETHHHHHHHTSSEEEECTTCEEECCCEEEEE-
T ss_pred ------------------------HHHHHHHhCCCCEEEEEecCCCEEhHHHHHHHHhcCceeECCCCEEEeccceecC-
Confidence 24445778999999999 99999999999999999999999999999987533
Q ss_pred CCchHH---------------HHHhcCCCc--hHHHHHHhhcCCCCCcHHHHHHcCccceecCC
Q 012534 231 PDVGFS---------------YIAAKGPGG--GSVGAYLGMTGKRISTPSDALFAGLGTDYVPS 277 (461)
Q Consensus 231 P~~G~~---------------~~L~rlvG~--~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~ 277 (461)
|..|.+ ..+++..|. . .+.+++.++..++ |+||+++||||+++++
T Consensus 113 ~~~G~~~~~~~k~~~~~~~~~~~la~~~Gr~~~-~a~~~~~~~~~lt-A~EAle~GliD~V~~~ 174 (230)
T 3viv_A 113 SQNGSIIEAPPAITNYFIAYIKSLAQESGRNAT-IAEEFITKDLSLT-PEEALKYGVIEVVARD 174 (230)
T ss_dssp CTTSCEEECCHHHHHHHHHHHHHHHHHTTCCHH-HHHHHHHTCCEEC-HHHHHHTTSCSEECSS
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHhCcCHH-HHHHHHhcCCeec-HHHHHHcCCceEecCC
Confidence 444432 246777886 5 8999999999999 9999999999999974
No 81
>2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferas beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=99.57 E-value=7.4e-15 Score=145.40 Aligned_cols=153 Identities=14% Similarity=0.135 Sum_probs=118.3
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCCCCCCCCCCCC
Q 012534 77 VAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVPLKCGD 156 (461)
Q Consensus 77 V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (461)
|+++..+..-..|+|+..+.+++.++++.+.++ .+.+|+|+++| |+|+.+....
T Consensus 120 V~v~a~d~~~~ggslg~~~~~Ki~r~~e~A~~~-~~PvI~l~~sG------Garlqeg~~~------------------- 173 (304)
T 2f9y_B 120 VVAAAFEFAFMGGSMGSVVGARFVRAVEQALED-NCPLICFSASG------GARMQEALMS------------------- 173 (304)
T ss_dssp CBEEEECTTSTTTCBCTHHHHHHHHHHHHHHHH-TCCEEEEEEES------SBCGGGTHHH-------------------
T ss_pred EEEEEEcCccccCCCCHHHHHHHHHHHHHHHhC-CCCEEEEECCC------CcCHHHHHHH-------------------
Confidence 666666666678999999999999999999998 89999999986 7787653210
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhh-hHhhhcCCeEEEcCCceEeccccccCCCCCchH
Q 012534 157 VKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFG-IGISGHGRYRIVTEKTLLAMPENGIGLFPDVGF 235 (461)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG-~~LalacD~ria~e~a~f~~pe~~lGl~P~~G~ 235 (461)
+ ..+......+..+...++|+|++|+|.|.||| +.++++||++||.++|+|++. +
T Consensus 174 ------------l-~~~~~i~~al~~~~~~~vP~IavV~G~~~GGg~a~~a~~~D~via~~~A~i~v~-----------G 229 (304)
T 2f9y_B 174 ------------L-MQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFA-----------G 229 (304)
T ss_dssp ------------H-HHHHHHHHHHHHHHHTTCCEEEEEEEEEEHHHHTTGGGCCSEEEECTTCBEESS-----------C
T ss_pred ------------H-HHHHHHHHHHHHHhcCCCCEEEEEECCCccHHHHHHHhcCCEEEEeCCcEEEee-----------c
Confidence 0 01122222233345569999999999999999 888999999999999999987 3
Q ss_pred HHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHH
Q 012534 236 SYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEAL 287 (461)
Q Consensus 236 ~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~~~~al 287 (461)
...+.+++|.. ++++..+ |+++.++|+||.|++++++.+.+.++
T Consensus 230 p~~i~~~ig~~-------l~~~~~~-Ae~~~~~Glvd~Vv~~~el~~~l~~l 273 (304)
T 2f9y_B 230 PRVIEQTVREK-------LPPGFQR-SEFLIEKGAIDMIVRRPEMRLKLASI 273 (304)
T ss_dssp HHHHHHHHTSC-------CCTTTTB-HHHHGGGTCCSEECCHHHHHHHHHHH
T ss_pred HHHHHHHhCcc-------CCcccCC-HHHHHhcCCccEEeCcHHHHHHHHHH
Confidence 45667777754 5788887 99999999999999887665544444
No 82
>1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1
Probab=99.55 E-value=2.9e-14 Score=134.97 Aligned_cols=141 Identities=12% Similarity=0.077 Sum_probs=107.2
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCCCCCCCCCCCCcchhhhhhhhHHH
Q 012534 90 AMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVPLKCGDVKEISTQNQLSEM 169 (461)
Q Consensus 90 al~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (461)
.++.++.++|.+.|..++.|+.++.|+|.= .|.|+++...
T Consensus 53 ~I~~~~a~~i~~~L~~l~~~~~~k~I~l~I-----nSPGG~v~ag----------------------------------- 92 (218)
T 1y7o_A 53 PVEDNMANSVIAQLLFLDAQDSTKDIYLYV-----NTPGGSVSAG----------------------------------- 92 (218)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCTTSCEEEEE-----EECCBCHHHH-----------------------------------
T ss_pred EECHHHHHHHHHHHHHHHhcCCCCCEEEEE-----ECcCCCHHHH-----------------------------------
Confidence 388999999999999999887778777752 3334443321
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCe--EEEcCCceEeccccccCCCCCchH------------
Q 012534 170 IEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRY--RIVTEKTLLAMPENGIGLFPDVGF------------ 235 (461)
Q Consensus 170 ~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~--ria~e~a~f~~pe~~lGl~P~~G~------------ 235 (461)
..++..|..+++||++.++|.|.++|+.|+++||. |+|.++++|++++.. |.+|..|.
T Consensus 93 -------~~I~~~i~~~~~pV~t~v~G~AaS~G~~Ia~a~d~g~r~a~p~a~igih~p~-~g~~~~G~~~di~~~~~~i~ 164 (218)
T 1y7o_A 93 -------LAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPM-GGTGGGTQQTDMAIAPEHLL 164 (218)
T ss_dssp -------HHHHHHHHHSSSCEEEEEEEEEETHHHHHHTTSCTTCEEECTTCEEECCCCC---------------CHHHHH
T ss_pred -------HHHHHHHHhcCCCEEEEEccEeHHHHHHHHHcCCcCcEEEcCCcEEEEeccc-ccccCcCCHHHHHHHHHHHH
Confidence 12334567789999999999999999999999999 999999999999987 44443333
Q ss_pred ------HHHHhcCCCch-HHHHHHhhcCCCCCcHHHHHHcCccceecCCCC
Q 012534 236 ------SYIAAKGPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDYVPSGN 279 (461)
Q Consensus 236 ------~~~L~rlvG~~-~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~ 279 (461)
...+++..|.. ..+.+++.+|+.|+ |+||+++||||+++++++
T Consensus 165 ~~~~~~~~~~a~~~G~~~~~i~~~~~~~~~~t-a~EA~e~GLVD~v~~~~~ 214 (218)
T 1y7o_A 165 KTRNTLEKILAENSGQSMEKVHADAERDNWMS-AQETLEYGFIDEIMANNS 214 (218)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHSCCCBC-HHHHHHHTSCSEECCCC-
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHhCCCEEc-HHHHHHCCCCcEEcCcCC
Confidence 24566666762 26788899999999 999999999999998765
No 83
>2f9i_A Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=99.46 E-value=6.3e-13 Score=132.75 Aligned_cols=153 Identities=11% Similarity=0.045 Sum_probs=109.0
Q ss_pred cCcEEEEEEcCCC---------CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCC
Q 012534 74 PNGVAVITLDRPK---------ALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNT 144 (461)
Q Consensus 74 ~~~V~~ItLnrP~---------~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~ 144 (461)
+|.-..|.-|+|. ..++++++....+.++++.+++.. +-+|.|.-.+ +++. |.+..+..
T Consensus 115 ~G~~V~Via~d~~~~~~~~~~~~~G~~~~~~~~Ka~r~~~~A~~~~-~PlI~lvdt~-Ga~~-g~~ae~~g--------- 182 (327)
T 2f9i_A 115 NGRAVTVIGQQRGKDTKDNIYRNFGMAHPEGYRKALRLMKQAEKFN-RPIFTFIDTK-GAYP-GKAAEERG--------- 182 (327)
T ss_dssp TTEEEEEEEECCCSSHHHHHHTGGGCCCHHHHHHHHHHHHHHHHTT-CCEEEEEEES-CSCC-CHHHHHTT---------
T ss_pred CCEEEEEEEEcCCCchhhhhhhhcCCCCHHHHHHHHHHHHHHhhcC-CCEEEEEeCC-CCCc-chhhhhhh---------
Confidence 4444445555554 457899999999999999998765 4455555443 2332 32211100
Q ss_pred CCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEeccc
Q 012534 145 PLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPE 224 (461)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe 224 (461)
.......++..+..+++|+|++|+|.|.|||+.++++||++||.++++|++
T Consensus 183 ---------------------------~~~~~a~~l~al~~~~vPvIavV~G~a~GGGa~~~~~~D~via~~~A~~~v-- 233 (327)
T 2f9i_A 183 ---------------------------QSESIATNLIEMASLKVPVIAIVIGEGGSGGALGIGIANKVLMLENSTYSV-- 233 (327)
T ss_dssp ---------------------------HHHHHHHHHHHHHTCSSCEEEEEEEEEBHHHHHTTCCCSEEEEETTCBCBS--
T ss_pred ---------------------------hHHHHHHHHHHHHhCCCCEEEEEECCcChHHHHHHHCCCEEEEcCCceEee--
Confidence 223344566788999999999999999999999999999999999999885
Q ss_pred cccCCCCCchHHHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCC
Q 012534 225 NGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPS 277 (461)
Q Consensus 225 ~~lGl~P~~G~~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~ 277 (461)
+.|.++++..+.+..+.. .+.++ ..++ |++|+++|+||+|++.
T Consensus 234 ----~~peg~a~il~~~~~~a~-~A~e~----~~it-A~~a~~~GlVd~VV~e 276 (327)
T 2f9i_A 234 ----ISPEGAAALLWKDSNLAK-IAAET----MKIT-AHDIKQLGIIDDVISE 276 (327)
T ss_dssp ----SCHHHHHHHHSSCGGGHH-HHHHH----HTCB-HHHHHHTTSSSEEECC
T ss_pred ----cCchHHHHHHHHHhcchH-HHHHH----cCCC-HHHHHHcCCceEEecC
Confidence 345555554444443334 67666 6798 9999999999999983
No 84
>2f9y_A Acetyl-COA carboxylase, carboxyltransferase alpha; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=99.46 E-value=7.8e-13 Score=132.57 Aligned_cols=140 Identities=12% Similarity=-0.007 Sum_probs=108.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCCCCCCCCCCCCcchhhhhhhh
Q 012534 87 ALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVPLKCGDVKEISTQNQL 166 (461)
Q Consensus 87 ~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (461)
..++++++....+.++++.+++.. +-+|.|.-.+ +++. |....+..
T Consensus 151 ~~G~~~~~~~~Ka~r~~~~A~~~~-lPlI~lvDt~-Ga~~-g~~aE~~g------------------------------- 196 (339)
T 2f9y_A 151 NFGMPAPEGYRKALRLMQMAERFK-MPIITFIDTP-GAYP-GVGAEERG------------------------------- 196 (339)
T ss_dssp GGGCCCHHHHHHHHHHHHHHHHTT-CCEEEEEEES-CSCC-SHHHHHTT-------------------------------
T ss_pred hcCCCCHHHHHHHHHHHHHHhhcC-CCEEEEEeCC-CCcc-chHHHHHH-------------------------------
Confidence 457899999999999999988765 4555555443 2332 22211100
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEeccccccCCCCCchHHHHHhcCCCch
Q 012534 167 SEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGG 246 (461)
Q Consensus 167 ~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~lGl~P~~G~~~~L~rlvG~~ 246 (461)
.......++..+..+++|+|++|+|.|.|||+.++++||++||.++++|++ +.|.++++.++.+..+..
T Consensus 197 -----~~~~~a~~l~al~~~~vPvIavV~G~a~GGGa~~~~~~D~via~p~A~~~v------~~Peg~asil~~~~~~~~ 265 (339)
T 2f9y_A 197 -----QSEAIARNLREMSRLGVPVVCTVIGEGGSGGALAIGVGDKVNMLQYSTYSV------ISPEGCASILWKSADKAP 265 (339)
T ss_dssp -----HHHHHHHHHHHHHTCSSCEEEEEEEEEEHHHHHTTCCCSEEEECTTCEEES------SCHHHHHHHHSSCSTTHH
T ss_pred -----HHHHHHHHHHHHHhCCCCEEEEEeCCcCcHHHHHHhccCeeeecCCCEEEe------eccchHHHHHHHhhccHH
Confidence 233345567789999999999999999999999999999999999999996 567788887777776665
Q ss_pred HHHHHHhhcCCCCCcHHHHHHcCccceecCC
Q 012534 247 SVGAYLGMTGKRISTPSDALFAGLGTDYVPS 277 (461)
Q Consensus 247 ~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~ 277 (461)
.+.++ ..++ |++|+++|+||+|++.
T Consensus 266 -~Aae~----~~it-A~~a~~~GlVd~VV~e 290 (339)
T 2f9y_A 266 -LAAEA----MGII-RPRLKELKLIDSIIPE 290 (339)
T ss_dssp -HHHHH----HTCS-HHHHHTTTSCSCCCCC
T ss_pred -HHHHH----cCCC-HHHHHHcCCeeEEecC
Confidence 77777 6798 9999999999999983
No 85
>2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopept mycobacterium tuberculosis, ATP-dependent protease; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A
Probab=98.88 E-value=8.2e-09 Score=96.71 Aligned_cols=138 Identities=11% Similarity=0.032 Sum_probs=96.7
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEE--ecCCCccccCCChhhHHHHhhhcCCCCCCCCCCCCCCCcchhhhhhhhH
Q 012534 90 AMNLDMDIKYKSFLDEWESDPRVKCVLIE--GSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVPLKCGDVKEISTQNQLS 167 (461)
Q Consensus 90 al~~~m~~eL~~~l~~~~~d~~vr~vVlt--g~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (461)
.++..+.+.+.+.|..++.++.++.|+|. +.|+.+| .-
T Consensus 35 ~I~~~~a~~i~~~L~~~~~~~~~k~I~l~InSPGG~v~-------a~--------------------------------- 74 (208)
T 2cby_A 35 EVNDEIANRLCAQILLLAAEDASKDISLYINSPGGSIS-------AG--------------------------------- 74 (208)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHH-------HH---------------------------------
T ss_pred EECHHHHHHHHHHHHHHHhCCCCCCEEEEEECCCCCHH-------HH---------------------------------
Confidence 36789999999999999877666666553 4442221 11
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCe--EEEcCCceEeccccccCCCC---CchH-------
Q 012534 168 EMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRY--RIVTEKTLLAMPENGIGLFP---DVGF------- 235 (461)
Q Consensus 168 ~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~--ria~e~a~f~~pe~~lGl~P---~~G~------- 235 (461)
..++..|..+++||++.+.|.|.++|..++++||. |++.+++.+++....-|... +...
T Consensus 75 ---------~~I~~~i~~~~~pV~~~v~g~AaS~g~~Ia~agd~~~~~a~p~a~igih~p~~~~~G~~~d~~~~~~~l~~ 145 (208)
T 2cby_A 75 ---------MAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQAEQFAV 145 (208)
T ss_dssp ---------HHHHHHHHHCSSCEEEEEEEEEETHHHHHHHTSCTTCEEECTTCEEECCCC----------CHHHHHHHHH
T ss_pred ---------HHHHHHHHhcCCCEEEEECcEeHHHHHHHHhCCCcCCEEEcCCcEEEEecccccccCCHHHHHHHHHHHHH
Confidence 23444577789999999999999999999999999 99999999988765432210 0000
Q ss_pred -----HHHHhcCCCchH-HHHHHhhcCCCCCcHHHHHHcCccceecCC
Q 012534 236 -----SYIAAKGPGGGS-VGAYLGMTGKRISTPSDALFAGLGTDYVPS 277 (461)
Q Consensus 236 -----~~~L~rlvG~~~-~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~ 277 (461)
...+.+..|... ...+++..|+.++ |+||+++||||++.+.
T Consensus 146 ~~~~~~~~~a~~~g~~~~~i~~~~~~~~~~t-a~eA~e~GLvD~i~~~ 192 (208)
T 2cby_A 146 IKKEMFRLNAEFTGQPIERIEADSDRDRWFT-AAEALEYGFVDHIITR 192 (208)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHTTCEEE-HHHHHHHTSCSEECSC
T ss_pred HHHHHHHHHHHHhCcCHHHHHHHHhCCcEEc-HHHHHHcCCCcEecCc
Confidence 011333334431 3456778899999 9999999999999964
No 86
>3qwd_A ATP-dependent CLP protease proteolytic subunit; caseinolytic protease, serin-protease, hydrolase; 2.10A {Staphylococcus aureus subsp} SCOP: c.14.1.1 PDB: 3v5e_A 3v5i_A 3sta_V 3st9_A
Probab=98.43 E-value=2.3e-06 Score=79.59 Aligned_cols=140 Identities=11% Similarity=0.084 Sum_probs=94.8
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEE--EecCCCccccCCChhhHHHHhhhcCCCCCCCCCCCCCCCcchhhhhhhhH
Q 012534 90 AMNLDMDIKYKSFLDEWESDPRVKCVLI--EGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVPLKCGDVKEISTQNQLS 167 (461)
Q Consensus 90 al~~~m~~eL~~~l~~~~~d~~vr~vVl--tg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (461)
.++..+.+.+.+.|..++.++..+.|+| -+.| +++...
T Consensus 35 ~I~~~~a~~i~~~L~~l~~~~~~~~I~l~InSPG-------G~v~~~--------------------------------- 74 (203)
T 3qwd_A 35 QIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG-------GSVTAG--------------------------------- 74 (203)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECC-------BCHHHH---------------------------------
T ss_pred EECHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCC-------CCHHHH---------------------------------
Confidence 4889999999999999987665665554 4444 222211
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCC--eEEEcCCceEeccccccCC---CCCchHH-H----
Q 012534 168 EMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGR--YRIVTEKTLLAMPENGIGL---FPDVGFS-Y---- 237 (461)
Q Consensus 168 ~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD--~ria~e~a~f~~pe~~lGl---~P~~G~~-~---- 237 (461)
..+...|..+++||++.+.|.|.++|..|+++|| .|++.+++.|.+....-|. ..+.--. .
T Consensus 75 ---------~~I~~~i~~~~~~V~t~~~G~AaSag~~i~~ag~~g~r~~~p~a~imiHqP~~~~~G~a~di~~~a~~l~~ 145 (203)
T 3qwd_A 75 ---------FAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILK 145 (203)
T ss_dssp ---------HHHHHHHHHSSSCEEEEEEEEEETHHHHHHHTSCTTCEEECTTCEEECCCCSSSTTTTSCHHHHHHHHHTT
T ss_pred ---------HHHHHHHHHhcCCcEEEEeeeehhHHHHHHHcCCcCeEEEcCCceEEEecccccccCCHHHHHHHHHHHHH
Confidence 1234457778999999999999999999999999 6999999999886554322 1111100 0
Q ss_pred -------HHhcCCCch-HHHHHHhhcCCCCCcHHHHHHcCccceecCCCC
Q 012534 238 -------IAAKGPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDYVPSGN 279 (461)
Q Consensus 238 -------~L~rlvG~~-~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~ 279 (461)
.+.+.-|.. .....++-...-++ |+||+++||||+|+.+..
T Consensus 146 ~~~~~~~~~a~~tG~~~e~i~~~~~~d~~lt-a~EA~e~GliD~I~~~~~ 194 (203)
T 3qwd_A 146 TREKLNRILSERTGQSIEKIQKDTDRDNFLT-AEEAKEYGLIDEVMVPET 194 (203)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHTSCCCEE-HHHHHHHTSCSEECCCCC
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHhhcCceec-HHHHHHcCCcCEecCCcc
Confidence 112222322 13444444556677 999999999999997654
No 87
>2f6i_A ATP-dependent CLP protease, putative; structural genomics, structural genomics conso SGC, hydrolase; 2.45A {Plasmodium falciparum} SCOP: c.14.1.1
Probab=98.40 E-value=3.8e-06 Score=78.85 Aligned_cols=138 Identities=11% Similarity=0.018 Sum_probs=90.3
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEE--EecCCCccccCCChhhHHHHhhhcCCCCCCCCCCCCCCCcchhhhhhhhH
Q 012534 90 AMNLDMDIKYKSFLDEWESDPRVKCVLI--EGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVPLKCGDVKEISTQNQLS 167 (461)
Q Consensus 90 al~~~m~~eL~~~l~~~~~d~~vr~vVl--tg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (461)
.++..+...+.+.|..++.++. +.|+| -+.| +++..-
T Consensus 47 ~I~~~~a~~i~~~L~~l~~~~~-k~I~l~INSPG-------Gsv~a~--------------------------------- 85 (215)
T 2f6i_A 47 EINKKTADELISQLLYLDNINH-NDIKIYINSPG-------GSINEG--------------------------------- 85 (215)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCC-SCEEEEEEECC-------BCHHHH---------------------------------
T ss_pred EECHHHHHHHHHHHHHHHhCCC-CcEEEEEECCC-------CCHHHH---------------------------------
Confidence 3788899999999998866554 65555 4544 222111
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCe--EEEcCCceEeccccccCCC---CCchHHH-----
Q 012534 168 EMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRY--RIVTEKTLLAMPENGIGLF---PDVGFSY----- 237 (461)
Q Consensus 168 ~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~--ria~e~a~f~~pe~~lGl~---P~~G~~~----- 237 (461)
..++..|..+++||++.+.|.|..+|.-|+++||. |+|.+++.+++.....|.. .+.....
T Consensus 86 ---------~~I~~~i~~~~~pV~t~v~g~AAS~g~~Ia~agd~g~i~a~p~s~i~ih~p~~~~~G~~~di~~~~~el~~ 156 (215)
T 2f6i_A 86 ---------LAILDIFNYIKSDIQTISFGLVASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEIQTKEILY 156 (215)
T ss_dssp ---------HHHHHHHHHSSSCEEEEEEEEECHHHHHHHHTSCTTCEEECTTCEEESSCTTCSCC--------CHHHHHH
T ss_pred ---------HHHHHHHHhcCCCEEEEEeeEhHhHHHHHHHcCCcccEEEcCCCEEEEeccccccCCchHHHHHHHHHHHH
Confidence 23444577788999999999999999999999999 9999999998766543321 1111000
Q ss_pred -------HHhcCCCch-HHHHHHhhcCCCCCcHHHHHHcCccceecCCC
Q 012534 238 -------IAAKGPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDYVPSG 278 (461)
Q Consensus 238 -------~L~rlvG~~-~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~ 278 (461)
.+.+..|.. ....+++-.+.-++ |+||+++||||++.+..
T Consensus 157 ~~~~i~~~ya~~~g~~~e~i~~~~~~~~~lt-a~eA~e~GLiD~I~~~~ 204 (215)
T 2f6i_A 157 LKKLLYHYLSSFTNQTVETIEKDSDRDYYMN-ALEAKQYGIIDEVIETK 204 (215)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHTTCEEC-HHHHHHHTSCSEECCCS
T ss_pred HHHHHHHHHHHHhCcCHHHHHHHHhCCeecC-HHHHHHCCCCCEecCCc
Confidence 011111221 13333333344568 99999999999999753
No 88
>1yg6_A ATP-dependent CLP protease proteolytic subunit; endopeptidase CLP, caseinolytic protease, protease TI, heat shock protein F21.5, hydrolase; 1.90A {Escherichia coli} SCOP: c.14.1.1 PDB: 1tyf_A 2fzs_A* 3mt6_R 1yg8_A 3hln_A 2zl2_A 2zl0_A 2zl4_A 2zl3_A 3tt7_A* 3tt6_A 3ktg_A 3kth_A 3kti_A* 3ktj_A* 3ktk_A* 3q7h_A
Probab=98.38 E-value=9.3e-07 Score=81.66 Aligned_cols=138 Identities=14% Similarity=0.044 Sum_probs=93.1
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEE--ecCCCccccCCChhhHHHHhhhcCCCCCCCCCCCCCCCcchhhhhhhhH
Q 012534 90 AMNLDMDIKYKSFLDEWESDPRVKCVLIE--GSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVPLKCGDVKEISTQNQLS 167 (461)
Q Consensus 90 al~~~m~~eL~~~l~~~~~d~~vr~vVlt--g~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (461)
.++..+.+.+.+.|..++.++..+.|+|. +.| +++..-
T Consensus 34 ~I~~~~a~~i~~~L~~l~~~~~~~~I~l~InSPG-------G~v~a~--------------------------------- 73 (193)
T 1yg6_A 34 QVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG-------GVITAG--------------------------------- 73 (193)
T ss_dssp SBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECC-------BCHHHH---------------------------------
T ss_pred EEcHHHHHHHHHHHHHHHhcCCCCCEEEEEECcC-------CCHHHH---------------------------------
Confidence 37889999999999998876666766664 444 222211
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCe--EEEcCCceEeccccccCCCC---CchHHH-----
Q 012534 168 EMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRY--RIVTEKTLLAMPENGIGLFP---DVGFSY----- 237 (461)
Q Consensus 168 ~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~--ria~e~a~f~~pe~~lGl~P---~~G~~~----- 237 (461)
..++..|..+++||++.+.|.|..+|.-|+++||. |++.+++.++......|... +.....
T Consensus 74 ---------~~I~~~i~~~~~pV~~~v~g~AaS~g~~Ia~ag~~~~r~a~p~s~i~ih~p~~~~~G~~~d~~~~~~~l~~ 144 (193)
T 1yg6_A 74 ---------MSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILK 144 (193)
T ss_dssp ---------HHHHHHHHHSSSCEEEEEEEEEETHHHHHHHTSCTTCEEECTTCEEEECCCEEEEEEEHHHHHHHHHHHHH
T ss_pred ---------HHHHHHHHhcCCCEEEEEeeeHHHHHHHHHHCCCcCcEEEecCcEEEEEeccccccCCHHHHHHHHHHHHH
Confidence 22444577788999999999999999999999999 99999999887654433210 100000
Q ss_pred -------HHhcCCCchH-HHHHHhhcCCCCCcHHHHHHcCccceecCC
Q 012534 238 -------IAAKGPGGGS-VGAYLGMTGKRISTPSDALFAGLGTDYVPS 277 (461)
Q Consensus 238 -------~L~rlvG~~~-~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~ 277 (461)
.+.+.-|... ....++-.+.-++ |+||+++||||+++.+
T Consensus 145 ~~~~~~~~~a~~~g~~~~~i~~~~~~~~~~t-a~eA~~~GliD~i~~~ 191 (193)
T 1yg6_A 145 VKGRMNELMALHTGQSLEQIERDTERDRFLS-APEAVEYGLVDSILTH 191 (193)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHTSSCEEEE-HHHHHHHTSSSEECCC
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHhcCCeEEc-HHHHHHcCCCCEecCC
Confidence 1222224321 2333433345568 9999999999999864
No 89
>1tg6_A Putative ATP-dependent CLP protease proteolytic S; mitochondrial CLPP, CLP/HSP 100, ATP-dependent protease, HYD; HET: FME; 2.10A {Homo sapiens} SCOP: c.14.1.1
Probab=98.28 E-value=5.9e-06 Score=80.20 Aligned_cols=145 Identities=13% Similarity=0.046 Sum_probs=95.5
Q ss_pred EEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEE--ecCCCccccCCChhhHHHHhhhcCCCCCCCCCCCCCCC
Q 012534 79 VITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIE--GSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVPLKCGD 156 (461)
Q Consensus 79 ~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVlt--g~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (461)
+|.++.+ ++.++...+...|..++.++..+.|+|. +.| +++..-
T Consensus 84 II~l~G~-----I~d~~a~~iiaqL~~l~~ed~~k~I~L~INSPG-------GsV~ag---------------------- 129 (277)
T 1tg6_A 84 IVCVMGP-----IDDSVASLVIAQLLFLQSESNKKPIHMYINSPG-------GVVTAG---------------------- 129 (277)
T ss_dssp EEEEESS-----BCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECC-------BCHHHH----------------------
T ss_pred EEEEcCE-----ECHHHHHHHHHHHHHHHhcCCCCCEEEEEECCC-------CCHHHH----------------------
Confidence 3555544 8888999999999988664445666664 444 222211
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCe--EEEcCCceEeccccccCCCCCch
Q 012534 157 VKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRY--RIVTEKTLLAMPENGIGLFPDVG 234 (461)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~--ria~e~a~f~~pe~~lGl~P~~G 234 (461)
..++..|..+++||++.+.|.|..+|.-|+++||. |++.+++.++.....-|......
T Consensus 130 --------------------~aIyd~I~~~k~pV~t~v~G~AASaG~~Ia~Agd~gkr~a~P~S~ImihqP~~g~~G~a~ 189 (277)
T 1tg6_A 130 --------------------LAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGARGQAT 189 (277)
T ss_dssp --------------------HHHHHHHHHSCSCEEEEEEEEEETHHHHHHHTSCTTCEEECTTCEEEECCCCCCCCSSHH
T ss_pred --------------------HHHHHHHHhcCCCEEEEEccEeHHHHHHHHHCCCcCCEEEecCCEEEEecccccccCcHH
Confidence 12344567788999999999999999999999999 99999999887655433211000
Q ss_pred HHH---------------HHhcCCCch-HHHHHHhhcCCCCCcHHHHHHcCccceecCCC
Q 012534 235 FSY---------------IAAKGPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDYVPSG 278 (461)
Q Consensus 235 ~~~---------------~L~rlvG~~-~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~ 278 (461)
-.. .+.+.-|.. ....+++-.+.-++ |+||+++||||+++...
T Consensus 190 Di~~~a~ei~~~~~~~~~i~a~~tG~~~e~i~~~~drd~~lt-a~EAle~GLID~I~~~~ 248 (277)
T 1tg6_A 190 DIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMS-PMEAQEFGILDKVLVHP 248 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHSSCEEEC-HHHHHHHTSCSEECSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhcCcccC-HHHHHHCCCCCEecCcc
Confidence 000 111122322 13344444455678 99999999999999754
No 90
>3p2l_A ATP-dependent CLP protease proteolytic subunit; structural genomics, center for structural genomics of infec diseases, csgid; 2.29A {Francisella tularensis subsp} SCOP: c.14.1.1
Probab=98.15 E-value=7.5e-06 Score=76.03 Aligned_cols=135 Identities=14% Similarity=0.034 Sum_probs=91.6
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEE--EecCCCccccCCChhhHHHHhhhcCCCCCCCCCCCCCCCcchhhhhhhhH
Q 012534 90 AMNLDMDIKYKSFLDEWESDPRVKCVLI--EGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVPLKCGDVKEISTQNQLS 167 (461)
Q Consensus 90 al~~~m~~eL~~~l~~~~~d~~vr~vVl--tg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (461)
.++..+.+.+.+.|..++.++..+.|+| -+.| +++...
T Consensus 38 ~I~~~~a~~i~~~L~~l~~~~~~~~I~l~INSpG-------G~v~~~--------------------------------- 77 (201)
T 3p2l_A 38 EVNDHSANLVIAQLLFLESEDPDKDIYFYINSPG-------GMVTAG--------------------------------- 77 (201)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECC-------BCHHHH---------------------------------
T ss_pred EECHHHHHHHHHHHHHHHhcCCCCCEEEEEECCC-------CCHHHH---------------------------------
Confidence 4788999999999999887655565555 3444 222211
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCe--EEEcCCceEeccccccCCCCCchHHH--------
Q 012534 168 EMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRY--RIVTEKTLLAMPENGIGLFPDVGFSY-------- 237 (461)
Q Consensus 168 ~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~--ria~e~a~f~~pe~~lGl~P~~G~~~-------- 237 (461)
..++..|..+++||++.+.|.|.++|.-|+++||- |++.+++.+.+....-|. .|-..
T Consensus 78 ---------~~I~~~i~~~~~~v~t~~~G~AaS~g~~i~~ag~~g~r~~~p~a~imiH~p~~~~---~G~a~di~~~a~~ 145 (201)
T 3p2l_A 78 ---------MGVYDTMQFIKPDVSTICIGLAASMGSLLLAGGAKGKRYSLPSSQIMIHQPLGGF---RGQASDIEIHAKN 145 (201)
T ss_dssp ---------HHHHHHHHHSSSCEEEEEEEEEETHHHHHHHTSSTTCEEECTTCEEEECCCEEEE---EEEHHHHHHHHHH
T ss_pred ---------HHHHHHHHHhCCCeEEEEcCEehhHHHHHHHcCccCCEEEcCCCeEEEecccccc---CCCHHHHHHHHHH
Confidence 22444577789999999999999999999999998 999999998776654221 11100
Q ss_pred ----------HHhcCCCchH-HHHHHhhcCCCCCcHHHHHHcCccceecCC
Q 012534 238 ----------IAAKGPGGGS-VGAYLGMTGKRISTPSDALFAGLGTDYVPS 277 (461)
Q Consensus 238 ----------~L~rlvG~~~-~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~ 277 (461)
.+.+.-|... ...+++-...-++ |+||+++||||+++++
T Consensus 146 l~~~~~~~~~~ya~~tG~~~e~i~~~~~~~~~lt-a~EA~e~GliD~I~~~ 195 (201)
T 3p2l_A 146 ILRIKDRLNKVLAHHTGQDLETIVKDTDRDNFMM-ADEAKAYGLIDHVIES 195 (201)
T ss_dssp HHHHHHHHHHHHHHHHCCCHHHHHHHTSSCEEEE-HHHHHHHTSCSEECCC
T ss_pred HHHHHHHHHHHHHHHhCcCHHHHHHHhhcCeeec-HHHHHHcCCccEecCC
Confidence 1122223321 2333333334467 9999999999999975
No 91
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=97.87 E-value=4.3e-05 Score=81.59 Aligned_cols=156 Identities=13% Similarity=0.013 Sum_probs=105.4
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCCCCCCCCCCCC
Q 012534 77 VAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVPLKCGD 156 (461)
Q Consensus 77 V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (461)
|.++..+..-..-++.+...+.+.++++.+.+.. +-+|.|.-+ +|+.+.+-........
T Consensus 107 v~v~a~D~t~~gGs~g~~~~~Ki~r~~e~A~~~~-lPvI~l~dS------gGArlqe~~~~l~~~~-------------- 165 (587)
T 1pix_A 107 CVVVASDNKKLAGAWVPGQAECLLRASDTAKTLH-VPLVYVLNC------SGVKFDEQEKVYPNRR-------------- 165 (587)
T ss_dssp EEEEEECTTTTTTEECTTHHHHHHHHHHHHHHHT-CCEEEEECC------CEECGGGHHHHSSSTT--------------
T ss_pred EEEEEECCccccCCCCHHHHHHHHHHHHHHHHcC-CCEEEEEeC------CCCCccccchhccccc--------------
Confidence 5555555555567899999999999999998764 456666543 3555655332110000
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCC-ceEec--cccccCCCCCc
Q 012534 157 VKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK-TLLAM--PENGIGLFPDV 233 (461)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~-a~f~~--pe~~lGl~P~~ 233 (461)
.+...+..+..+....+|+|++|.|.|.|||+.. ..||++|++++ +.+++ |++--++.|-
T Consensus 166 ---------------~~g~i~~~~~~ls~~giP~Isvv~G~~~GGga~~-a~~d~vim~e~~a~i~~~GP~vi~~~~~~- 228 (587)
T 1pix_A 166 ---------------GGGTPFFRNAELNQLGIPVIVGIYGTNPAGGGYH-SISPTVIIAHEKANMAVGGAGIMGGMNPK- 228 (587)
T ss_dssp ---------------STTHHHHHHHHHHHTTCCEEEEECSEEETHHHHH-HHSSSEEEEETTCEEESCCCTTCCSCCSS-
T ss_pred ---------------cHHHHHHHHHHHhCCCCCEEEEEecCCcHHHHHH-HhcCceEEecCCcEEEecCHHHHhhhccc-
Confidence 0111223345677889999999999999999999 99999999875 88887 3222222111
Q ss_pred hHHHHHhcCCCchHHHHHHh-hcCCCCCcHHH-----HH--HcCccceecCCCC
Q 012534 234 GFSYIAAKGPGGGSVGAYLG-MTGKRISTPSD-----AL--FAGLGTDYVPSGN 279 (461)
Q Consensus 234 G~~~~L~rlvG~~~~a~~l~-LtG~~i~~A~e-----A~--~~GLv~~vv~~~~ 279 (461)
-.+|.. +|.+++ .||+.++ +++ .+ +.|++|.++++++
T Consensus 229 -------~~~d~~-~A~el~~~tge~v~-~e~lgga~~h~~~~GvvD~vv~~e~ 273 (587)
T 1pix_A 229 -------GHVDLE-YANEIADMVDRTGK-TEPPGAVDIHYTETGFMREVYASEE 273 (587)
T ss_dssp -------SSCCHH-HHHHHHHHHHTTCC-CCCSSBHHHHTTTSCCSCEEESSHH
T ss_pred -------cccchh-HHHHHHHHhCCccC-hhhcccHHHHHhhcCceeEecCCHH
Confidence 135766 999999 8988876 443 33 5999999998755
No 92
>4gm2_A ATP-dependent CLP protease proteolytic subunit; structural genomics, structural genomics consortium, SGC, PR hydrolase; 2.80A {Plasmodium falciparum} PDB: 4hnk_A
Probab=97.79 E-value=0.00026 Score=65.62 Aligned_cols=101 Identities=13% Similarity=0.126 Sum_probs=68.4
Q ss_pred HHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCC--eEEEcCCceEeccccccCC----CCCchHHH------------H
Q 012534 177 YSLICKISEYKKPYISLMDGVTMGFGIGISGHGR--YRIVTEKTLLAMPENGIGL----FPDVGFSY------------I 238 (461)
Q Consensus 177 ~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD--~ria~e~a~f~~pe~~lGl----~P~~G~~~------------~ 238 (461)
..++..|...+.||...+-|.|.+.|.-|++++| .|++.+++++-+-....|. ..+.--.. .
T Consensus 86 laIyd~m~~~~~~V~t~~~G~AaS~as~il~aG~~gkR~~lP~a~iMIHqP~~~~~~G~a~di~i~a~el~~~~~~i~~i 165 (205)
T 4gm2_A 86 ISIVDVINYISSDVYTYCLGKAYGIACILASSGKKGYRFSLKNSSFCLNQSYSIIPFNQATNIEIQNKEIMNTKKKVIEI 165 (205)
T ss_dssp HHHHHHHHHSSSCEEEEEEEEEETHHHHHHTTSCTTCEEECTTCEEEECCCCCCCCSSCCSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEEEeeehhHHHHHHhcCCCCCEEecCCCEEEEecCcccccccCHHHHHHHHHHHHHHHHHHHHH
Confidence 3455567788999999999999999999999999 5999999998775554333 22211000 1
Q ss_pred HhcCCCch-HHHHHHhhcCCCCCcHHHHHHcCccceecCCC
Q 012534 239 AAKGPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDYVPSG 278 (461)
Q Consensus 239 L~rlvG~~-~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~ 278 (461)
+.+.-|.. ....+++-...-++ |+||+++||||+|+..+
T Consensus 166 ya~~TG~~~e~I~~~m~rd~~ms-a~EA~eyGlID~V~~~e 205 (205)
T 4gm2_A 166 ISKNTEKDTNVISNVLERDKYFN-ADEAVDFKLIDHILEKE 205 (205)
T ss_dssp HHHHHTCCHHHHHHHTTSCEEEE-HHHHHHTTSCSEECCC-
T ss_pred HHHHhCCCHHHHHHHhcCCcccC-HHHHHHcCCccEeecCC
Confidence 11112321 12334444455687 99999999999999753
No 93
>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=97.63 E-value=0.0018 Score=63.15 Aligned_cols=148 Identities=15% Similarity=0.135 Sum_probs=96.6
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCCCCCCCCCCCC
Q 012534 77 VAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVPLKCGD 156 (461)
Q Consensus 77 V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (461)
|+++..|..-..-+++....+.+.++++.+.+.. +-+|.|.-.| ++ -+.+-..
T Consensus 123 V~v~a~d~~~~gGs~g~~~~~K~~r~ie~A~~~~-lPlI~l~dsg-Ga-----r~qEGi~-------------------- 175 (285)
T 2f9i_B 123 FGVAVMDSRFRMGSMGSVIGEKICRIIDYCTENR-LPFILFSASG-GA-----RMQEGII-------------------- 175 (285)
T ss_dssp EEEEEECTTTGGGCCCHHHHHHHHHHHHHHHHTT-CCEEEEEEEC-SC-----CGGGHHH--------------------
T ss_pred EEEEEEccccccCcCCHHHHHHHHHHHHHHHHcC-CCEEEEEeCC-Cc-----chhhhhh--------------------
Confidence 5555444433567899999999999999988764 5677776655 33 1222000
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHh-hhcCCeEEEcCCceEeccccccCCCCCchH
Q 012534 157 VKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGI-SGHGRYRIVTEKTLLAMPENGIGLFPDVGF 235 (461)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~L-alacD~ria~e~a~f~~pe~~lGl~P~~G~ 235 (461)
.+. ........+.++.....|.|++|-|.|.||+... ++.+|++++.++|.+++--. -+.
T Consensus 176 -----------sl~-q~aki~~~l~~~s~~~vP~Isvv~g~~~GG~~as~a~~~D~i~a~p~A~i~~aGP-------~vi 236 (285)
T 2f9i_B 176 -----------SLM-QMGKTSVSLKRHSDAGLLYISYLTHPTTGGVSASFASVGDINLSEPKALIGFAGR-------RVI 236 (285)
T ss_dssp -----------HHH-HHHHHHHHHHHHHHTTCCEEEEEEEEEEHHHHTTGGGCCSEEEECTTCBEESSCH-------HHH
T ss_pred -----------hHh-HHHHHHHHHHHHHcCCCCEEEEEeCCccHHHHHHhhhCCCEEEEeCCcEEEEcCH-------HHH
Confidence 000 1223334556677789999999999999998555 78999999998887766221 111
Q ss_pred HHHHhcCCCchHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHH
Q 012534 236 SYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGS 282 (461)
Q Consensus 236 ~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA~~~GLv~~vv~~~~l~~ 282 (461)
...+ |.. . -+.+.+|+.+.+.|+||.|++++++.+
T Consensus 237 ~~~~----~~~-~-------~e~~~~Ae~~~~~G~iD~Iv~~~e~r~ 271 (285)
T 2f9i_B 237 EQTI----NEK-L-------PDDFQTAEFLLEHGQLDKVVHRNDMRQ 271 (285)
T ss_dssp HHHH----TSC-C-------CTTTTBHHHHHHTTCCSEECCGGGHHH
T ss_pred HHHh----ccc-c-------hHhHhhHHHHHhcCCccEEeChHHHHH
Confidence 1222 211 1 123444788889999999999877654
No 94
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=97.53 E-value=0.00038 Score=74.87 Aligned_cols=87 Identities=5% Similarity=-0.022 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHhcCCCceEEEEEecCCCccccC-CChhhHHHHhhhcCCCCCCCCCCCCCCCcchhhhhhhhHHHHHHH
Q 012534 95 MDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAG-MDIKGVVAEIQKDRNTPLVPKVPLKCGDVKEISTQNQLSEMIEVF 173 (461)
Q Consensus 95 m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG-~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (461)
...++.+.|+.+..|+.++.|+|.-..+ | +++....
T Consensus 71 ~~~~i~~~L~~a~~d~~ik~I~L~insp-----GgG~v~~~~-------------------------------------- 107 (593)
T 3bf0_A 71 SLFDIVNTIRQAKDDRNITGIVMDLKNF-----AGGDQPSMQ-------------------------------------- 107 (593)
T ss_dssp EHHHHHHHHHHHHHCTTCCCEEEECTEE-----EECCHHHHH--------------------------------------
T ss_pred CHHHHHHHHHHHHhCCCceEEEEEeCCC-----CCCcHHHHH--------------------------------------
Confidence 4678899999999999999999975421 3 4444322
Q ss_pred HHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEeccccc
Q 012534 174 TAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENG 226 (461)
Q Consensus 174 ~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~ 226 (461)
.+++.+..+....|||||.+++ +.-+|+-|+++||-+++.+.+.++...+.
T Consensus 108 -~I~~~i~~~k~~gkpvva~~~~-aas~~y~lAsaad~i~~~P~~~vg~~g~~ 158 (593)
T 3bf0_A 108 -YIGKALKEFRDSGKPVYAVGEN-YSQGQYYLASFANKIWLSPQGVVDLHGFA 158 (593)
T ss_dssp -HHHHHHHHHHHTTCCEEEEESC-EEHHHHHHHTTSSEEEECTTCCEECCCCB
T ss_pred -HHHHHHHHHHhcCCeEEEEEcc-chhHHHHHHHhCCEEEECCCceEEEeccc
Confidence 2234445555567999999886 56788999999999999999988876654
No 95
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A
Probab=97.50 E-value=0.0017 Score=68.44 Aligned_cols=138 Identities=19% Similarity=0.137 Sum_probs=91.2
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCCCCCCCCCCCC
Q 012534 77 VAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVPLKCGD 156 (461)
Q Consensus 77 V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (461)
|.++..+-.-..-++.....+.+.++++.+.+. .+-+|.|.-+| ++ -+.+-..
T Consensus 99 v~v~a~D~tv~gGS~g~~~~~Ki~ra~e~A~~~-~lP~I~l~dSg-Ga-----RmqEg~~-------------------- 151 (530)
T 3iav_A 99 VAVFSQDFTVFGGALGEVYGQKIVKVMDFALKT-GCPVVGINDSG-GA-----RIQEGVA-------------------- 151 (530)
T ss_dssp EEEEEECTTSGGGCBCHHHHHHHHHHHHHHHHH-TCCEEEEECCC-SB-----CGGGTHH--------------------
T ss_pred EEEEEECCCcceEeccHHHHHHHHHHHHHHHHc-CCCEEEEEcCC-Cc-----chhhhhh--------------------
Confidence 444444444467899999999999999999876 35667776544 23 3332110
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCC-ceEeccccccCCCCCchH
Q 012534 157 VKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK-TLLAMPENGIGLFPDVGF 235 (461)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~-a~f~~pe~~lGl~P~~G~ 235 (461)
.+..+ ...+..+.++.. ..|+|++|.|.|.|||......||++|++++ +.+++.
T Consensus 152 -----------~l~~~-~~i~~~~~~~s~-~iP~Isvv~G~~~GG~a~~~al~D~~im~~~~a~i~~a------------ 206 (530)
T 3iav_A 152 -----------SLGAY-GEIFRRNTHASG-VIPQISLVVGPCAGGAVYSPAITDFTVMVDQTSHMFIT------------ 206 (530)
T ss_dssp -----------HHHHH-HHHHHHHHHTTT-TSCEEEEECSEEEGGGGHHHHHSSEEEEETTTCEEESS------------
T ss_pred -----------hHHHH-HHHHHHHHHHcC-CCCEEEEEecCcchHHHHHHHhCCEEEEecCCcEEEec------------
Confidence 01111 111122222333 3999999999999999999999999999875 887763
Q ss_pred HHHHhcCCCchHHHHHHhhcCCCCCcHHHH-------HHcCccceecCCC
Q 012534 236 SYIAAKGPGGGSVGAYLGMTGKRISTPSDA-------LFAGLGTDYVPSG 278 (461)
Q Consensus 236 ~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA-------~~~GLv~~vv~~~ 278 (461)
|+. ..+ ..||+.++ +++. ...|++|.+++++
T Consensus 207 --------GP~--vi~-~~~ge~v~-~e~LGGa~~h~~~sGv~d~va~de 244 (530)
T 3iav_A 207 --------GPD--VIK-TVTGEDVG-FEELGGARTHNSTSGVAHHMAGDE 244 (530)
T ss_dssp --------CHH--HHH-HHHCCCCC-HHHHHBHHHHHHTSCCCSEEESSH
T ss_pred --------CHH--HHH-HHhCCcCC-hhhcchHHHHHhccCceeEEecCh
Confidence 322 111 15678887 7664 5799999999865
No 96
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}
Probab=97.25 E-value=0.0042 Score=65.42 Aligned_cols=139 Identities=14% Similarity=0.082 Sum_probs=91.8
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCCCCCCCCCCCC
Q 012534 77 VAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVPLKCGD 156 (461)
Q Consensus 77 V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (461)
|.++..+-.-..-++.....+.+.++++.+.+.. +-+|.|.-+| |+.+.+-..
T Consensus 107 v~v~a~D~t~~gGS~g~~~~~Ki~ra~e~A~~~~-lPvI~l~dSG------GARmqeg~~-------------------- 159 (531)
T 3n6r_B 107 VYVFSQDFTVLGGSVSETHSKKICKIMDMAMQNG-APVIGINDSG------GARIQEGVD-------------------- 159 (531)
T ss_dssp EEEEEECTTSGGGCBCHHHHHHHHHHHHHHHHHT-CCEEEEECCC------CBCGGGTHH--------------------
T ss_pred EEEEEECCCcccccccHHHHHHHHHHHHHHHHcC-CCEEEEeCCC------ccccCcccc--------------------
Confidence 4444444444568999999999999999987754 5566666544 333433111
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCC-ceEeccccccCCCCCchH
Q 012534 157 VKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK-TLLAMPENGIGLFPDVGF 235 (461)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~-a~f~~pe~~lGl~P~~G~ 235 (461)
.+..+-..++. +..+. -..|+|++|.|.|.|||.-...+||++|+.++ +.+++
T Consensus 160 -----------sl~~~~~i~~~-~~~~s-~~iP~Isvv~Gp~~GG~a~s~a~~D~vi~~~~~a~i~~------------- 213 (531)
T 3n6r_B 160 -----------SLAGYGEVFQR-NIMAS-GVVPQISMIMGPCAGGAVYSPAMTDFIFMVKDSSYMFV------------- 213 (531)
T ss_dssp -----------HHHHHHHHHHH-HHHTT-TTSCEEEEECSCCBGGGGHHHHHSSEEEEETTTCBCBS-------------
T ss_pred -----------hhhhHHHHHHH-HHHHh-CCCCEEEEEeCCcchHHHHHhhhCCEEEEecCCceEee-------------
Confidence 01111111111 11222 45899999999999999999999999999985 66554
Q ss_pred HHHHhcCCCchHHHHHHhhcCCCCCcHHHH-------HHcCccceecCCCC
Q 012534 236 SYIAAKGPGGGSVGAYLGMTGKRISTPSDA-------LFAGLGTDYVPSGN 279 (461)
Q Consensus 236 ~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA-------~~~GLv~~vv~~~~ 279 (461)
-|++ ..+ ..||+.++ +++. ...|++|.++++++
T Consensus 214 -------aGP~--vI~-~~~ge~v~-~E~LGGa~~h~~~sG~~d~v~~~e~ 253 (531)
T 3n6r_B 214 -------TGPD--VVK-TVTNEQVS-AEELGGATTHTRKSSVADAAFENDV 253 (531)
T ss_dssp -------SCHH--HHH-HHHCCCCC-HHHHHBHHHHHHTTSCCSEEESSHH
T ss_pred -------cCHH--HHH-HHhCCccC-hhhcchHHHHhhccCcceEEeCCHH
Confidence 1322 222 15788898 8888 78999999998743
No 97
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=97.23 E-value=0.0029 Score=66.75 Aligned_cols=138 Identities=14% Similarity=0.102 Sum_probs=90.7
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCCCCCCCCCCCC
Q 012534 77 VAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVPLKCGD 156 (461)
Q Consensus 77 V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (461)
|.++..+-.=..-++.....+.+..+++.+.+. .+-+|.|..+| |+.+.+-...
T Consensus 97 v~v~a~D~t~~gGS~g~~~~~Ki~ra~e~A~~~-~lP~I~l~~SG------GARmqeg~~s------------------- 150 (523)
T 1on3_A 97 VHAASQDFTVMGGSAGETQSTKVVETMEQALLT-GTPFLFFYDSG------GARIQEGIDS------------------- 150 (523)
T ss_dssp EEEEEECTTTGGGCBCHHHHHHHHHHHHHHHHH-TCCEEEEEEEC------SBCGGGTHHH-------------------
T ss_pred EEEEEEcCCccCCcCcHHHHHHHHHHHHHHHHc-CCCEEEEEcCC------CCChhhHHHH-------------------
Confidence 454555544467899999999999999999876 45677776544 4444432210
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEeccccccCCCCCchHH
Q 012534 157 VKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFS 236 (461)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~lGl~P~~G~~ 236 (461)
+..+-.-++.. ..+ .-..|+|++|.|+|.||+......||++|+.+++.+++.
T Consensus 151 ------------l~~~~~i~~~~-~~~-s~~iP~Isvv~gp~~GG~a~s~~l~D~ii~~~~a~i~~a------------- 203 (523)
T 1on3_A 151 ------------LSGYGKMFFAN-VKL-SGVVPQIAIIAGPCAGGASYSPALTDFIIMTKKAHMFIT------------- 203 (523)
T ss_dssp ------------HHHHHHHHHHH-HHH-TTTSCEEEEEEEEEESGGGHHHHHSSEEEEETTCEEESS-------------
T ss_pred ------------HHHHHHHHHHH-HHh-cCCCCEEEEEcCCCchHHHHHHhhCCeEEEeCCCEEEec-------------
Confidence 11111111121 222 345999999999999999999999999999998887664
Q ss_pred HHHhcCCCchHHHHHHhhcCCCCCcH-----HHHH--HcCccceecCCC
Q 012534 237 YIAAKGPGGGSVGAYLGMTGKRISTP-----SDAL--FAGLGTDYVPSG 278 (461)
Q Consensus 237 ~~L~rlvG~~~~a~~l~LtG~~i~~A-----~eA~--~~GLv~~vv~~~ 278 (461)
|++ ..+- .+|+.++ . .|.+ +.|++|.+++++
T Consensus 204 -------GP~--vI~~-~~ge~~~-~e~lggae~h~~~~G~vd~vv~d~ 241 (523)
T 1on3_A 204 -------GPQ--VIKS-VTGEDVT-ADELGGAEAHMAISGNIHFVAEDD 241 (523)
T ss_dssp -------CHH--HHHH-HHCCCCC-HHHHHSHHHHHHTTCCCSEEESSH
T ss_pred -------CHH--HHHH-HhCCcCC-hHhcccHHHHhhccCceEEEeCCH
Confidence 221 1111 3466666 4 3334 599999999853
No 98
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=97.11 E-value=0.0065 Score=64.34 Aligned_cols=138 Identities=13% Similarity=0.044 Sum_probs=89.3
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCCCCCCCCCCCC
Q 012534 77 VAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVPLKCGD 156 (461)
Q Consensus 77 V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (461)
|.++..+-.-..-++.....+.+.++++.+.+. .+-+|.|.-+| |+.+.+-..
T Consensus 110 v~v~a~D~t~~gGS~g~~~~~Ki~ra~e~A~~~-~lP~I~l~dSG------GARmqeg~~-------------------- 162 (548)
T 2bzr_A 110 VCIFSQDATVFGGSLGEVYGEKIVKVQELAIKT-GRPLIGINDGA------GARIQEGVV-------------------- 162 (548)
T ss_dssp EEEEEECTTSGGGCCCHHHHHHHHHHHHHHHHH-TCCEEEEECCC------SCCGGGTTH--------------------
T ss_pred EEEEEEcCccccCCCChhHHHHHHHHHHHHHHc-CCCEEEEEcCC------CCCchhHHH--------------------
Confidence 444444444466799999999999999999876 45677776544 444443211
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCC-ceEeccccccCCCCCchH
Q 012534 157 VKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK-TLLAMPENGIGLFPDVGF 235 (461)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~-a~f~~pe~~lGl~P~~G~ 235 (461)
.+..+-.-++.. ..+ .-..|+|++|.|+|.||+......||++|+.++ +.+++.
T Consensus 163 -----------sl~~~~~i~~~~-~~~-s~~iP~Isvv~gp~~GG~a~s~al~D~ii~~~~~a~i~~a------------ 217 (548)
T 2bzr_A 163 -----------SLGLYSRIFRNN-ILA-SGVIPQISLIMGAAAGGHVYSPALTDFVIMVDQTSQMFIT------------ 217 (548)
T ss_dssp -----------HHHHHHHHHHHH-HHT-TTTSCEEEEECSEEESGGGHHHHHSSEEEEETTTCEEESS------------
T ss_pred -----------HHHHHHHHHHHH-HHh-cCCCcEEEEecCCCchHHHHHHHhCCeEEeccCceeEEec------------
Confidence 011111111111 122 344999999999999999999999999999986 777654
Q ss_pred HHHHhcCCCchHHHHHHhhcCCCCCcHH-----HHH--HcCccceecCCC
Q 012534 236 SYIAAKGPGGGSVGAYLGMTGKRISTPS-----DAL--FAGLGTDYVPSG 278 (461)
Q Consensus 236 ~~~L~rlvG~~~~a~~l~LtG~~i~~A~-----eA~--~~GLv~~vv~~~ 278 (461)
|++ ..+- .+|+.++ .+ +.+ ..|++|.+++++
T Consensus 218 --------GP~--vI~~-~~ge~v~-~e~lggae~h~~~sG~~d~vv~d~ 255 (548)
T 2bzr_A 218 --------GPD--VIKT-VTGEEVT-MEELGGAHTHMAKSGTAHYAASGE 255 (548)
T ss_dssp --------CHH--HHHH-HHCCCCC-HHHHHBHHHHHHTSSCCSEEESSH
T ss_pred --------cHH--HHHH-HhCCcCC-hHhcccHHHHhhccCceeEEeCCH
Confidence 322 1111 3466666 43 333 599999999853
No 99
>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}
Probab=97.09 E-value=0.028 Score=59.02 Aligned_cols=188 Identities=13% Similarity=0.095 Sum_probs=122.4
Q ss_pred ccceEEEE-ecCcEEEEEEcCCCCC-------------CCCCHHHHHHHHHHHHHH-hcCCCceEEEEEecCCCccccCC
Q 012534 65 EEFVKGNV-HPNGVAVITLDRPKAL-------------NAMNLDMDIKYKSFLDEW-ESDPRVKCVLIEGSGPRAFCAGM 129 (461)
Q Consensus 65 ~~~i~~~~-~~~~V~~ItLnrP~~~-------------Nal~~~m~~eL~~~l~~~-~~d~~vr~vVltg~G~~~FcaG~ 129 (461)
|+.+.... ...+++.++...|..- +..-..|..||.++|-.+ -+++++...++...|+
T Consensus 265 y~~~~~ai~ra~r~a~~~~~g~~~a~~~~ld~i~aa~~~~~~l~~~~el~~All~l~~ne~~~~~~~~~t~g~------- 337 (556)
T 2w3p_A 265 YKTLDVTIDRAKRIATFTAKAPQTEPPASIDAIVAAGANWWPLKFAREFDDAILSMRTNELAVGTWVFRTEGD------- 337 (556)
T ss_dssp ETTEEEEEETTTTEEEEEEECCSSCCCCSHHHHHHHGGGSHHHHHHHHHHHHHHHHHHHCSSCCEEEEEEESC-------
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCchhhHHHHHHhhhcchhhhhhhHHHHHHHhhhhccHHHhHhhhhccCC-------
Confidence 34444433 2457899999886531 222345888996665554 5678899889888773
Q ss_pred ChhhHHHHhhhcCCCCCCCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeC-Cccchh-hhHhhh
Q 012534 130 DIKGVVAEIQKDRNTPLVPKVPLKCGDVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMD-GVTMGF-GIGISG 207 (461)
Q Consensus 130 Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavn-G~a~Gg-G~~Lal 207 (461)
...+......-. ..++-.-..+......+.+.+|.-...-++|.|. |.|+.| =+||++
T Consensus 338 -~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~r~d~~~~~~~~~~~~~~~~~g~~~e~~~ 397 (556)
T 2w3p_A 338 -ARHLLAADASLM-------------------QHKDHWFVRETIGLLRRTLARIDVSSRSLFALIEPGSCFAGTFAELAF 397 (556)
T ss_dssp -HHHHHHHHHHHH-------------------HTTTSHHHHHHHHHHHHHHHHHHTCSSEEEEEECTTCCEEGGGHHHHH
T ss_pred -HHHHhhhHHHHH-------------------hccchHHHHHHHHHHHHHHHHhcccchhheeeecCCcchHHHHHHHHH
Confidence 233332110000 0001111222333334566778788888999986 677655 689999
Q ss_pred cCCeEEEcC-------CceEeccccccCCCCCchHHHHH-hcCCCchHHHHH--HhhcCCCCCcHHHHHHcCccceecCC
Q 012534 208 HGRYRIVTE-------KTLLAMPENGIGLFPDVGFSYIA-AKGPGGGSVGAY--LGMTGKRISTPSDALFAGLGTDYVPS 277 (461)
Q Consensus 208 acD~ria~e-------~a~f~~pe~~lGl~P~~G~~~~L-~rlvG~~~~a~~--l~LtG~~i~~A~eA~~~GLv~~vv~~ 277 (461)
+||..++-+ .+.+.+.+.++|.+|-.-+..+| .|..|.. -..+ -...|+.++ +++|.++|||+...++
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 475 (556)
T 2w3p_A 398 AADRTYMAALPANEDEEPAITLSEVNFGLYPMVTHQSRLARRFYEET-EPLDAVRSRIGQAIK-PVEAERLGLVTASPDD 475 (556)
T ss_dssp TSSEEEECCCTTCTTTSCCEECCGGGGTTSCCTTSSCHHHHHTTTCH-HHHHHHHTTTTSCBC-HHHHHHTTSSSBCCCT
T ss_pred HhhhhhhhcCCCCCCCCceeEeeccccCcccCCCchhHHHHHhcCCc-chHHHHHHHhCCCCC-HHHHHhcCCeecCccc
Confidence 999999953 47899999999999977666666 5555653 3332 235699999 9999999999998876
Q ss_pred CChH
Q 012534 278 GNLG 281 (461)
Q Consensus 278 ~~l~ 281 (461)
-+.+
T Consensus 476 ~~~~ 479 (556)
T 2w3p_A 476 IDWA 479 (556)
T ss_dssp TTHH
T ss_pred CChH
Confidence 5554
No 100
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=97.03 E-value=0.0022 Score=67.60 Aligned_cols=138 Identities=15% Similarity=0.026 Sum_probs=89.6
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCCCCCCCCCCCC
Q 012534 77 VAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVPLKCGD 156 (461)
Q Consensus 77 V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (461)
|.++..+-.=..-++.....+.+..+++.+.+. .+-+|.|..+| |+.+.+-...
T Consensus 93 v~v~a~D~t~~gGS~g~~~~~Ki~ra~e~A~~~-~~P~I~l~~SG------GaRmqeg~~s------------------- 146 (522)
T 1x0u_A 93 VFAYAQDFTVLGGSLGETHANKIVRAYELALKV-GAPVVGINDSG------GARIQEGALS------------------- 146 (522)
T ss_dssp EEEEEECTTTGGGCBCHHHHHHHHHHHHHHHHH-TCCEEEEECCC------SBCGGGTHHH-------------------
T ss_pred EEEEEecCceeCccccHHHHHHHHHHHHHHHHc-CCCEEEEEcCC------CCChhHHHHH-------------------
Confidence 444444444456799999999999999999875 46677776544 4445432210
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCC-c-eEeccccccCCCCCch
Q 012534 157 VKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK-T-LLAMPENGIGLFPDVG 234 (461)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~-a-~f~~pe~~lGl~P~~G 234 (461)
+..+-.-++.+ ..+ .-..|+|++|.|+|.||+......||++|+.++ + .+++.
T Consensus 147 ------------l~~~~~i~~~~-~~~-s~~iP~Isvv~gp~~GG~a~s~~l~D~~i~~~~~a~~i~~a----------- 201 (522)
T 1x0u_A 147 ------------LEGYGAVFKMN-VMA-SGVIPQITIMAGPAAGGAVYSPALTDFIIMIKGDAYYMFVT----------- 201 (522)
T ss_dssp ------------HHHHHHHHHHH-HHH-TTTSCEEEEECSEEEGGGGHHHHHSSEEEEECSTTCEEESS-----------
T ss_pred ------------HHHHHHHHHHH-HHh-CCCCcEEEEEcCCCchHHHHHHhcCCeEEEecCCccEEEec-----------
Confidence 11111111111 122 345999999999999999999999999999987 7 66551
Q ss_pred HHHHHhcCCCchHHHHHHhhcCCCCCcH-----HHHH--HcCccceecCCC
Q 012534 235 FSYIAAKGPGGGSVGAYLGMTGKRISTP-----SDAL--FAGLGTDYVPSG 278 (461)
Q Consensus 235 ~~~~L~rlvG~~~~a~~l~LtG~~i~~A-----~eA~--~~GLv~~vv~~~ 278 (461)
|++ ..+- .+|+.++ . .|.+ +.|++|.+++++
T Consensus 202 ---------GP~--vI~~-~~ge~~~-~e~lggae~~~~~~G~~d~vv~~~ 239 (522)
T 1x0u_A 202 ---------GPE--ITKV-VLGEEVS-FQDLGGAVVHATKSGVVHFMVDSE 239 (522)
T ss_dssp ---------CHH--HHHH-TTCCCCC-HHHHHBHHHHHHTTCCCSEEESCH
T ss_pred ---------CHH--HHHH-HhCCcCC-hhhcchHHHHhhcCceeEEEeCCH
Confidence 221 1111 4566666 4 3334 589999999863
No 101
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=96.66 E-value=0.0096 Score=62.76 Aligned_cols=159 Identities=12% Similarity=0.044 Sum_probs=97.8
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCCCCCCCCCCCC
Q 012534 77 VAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVPLKCGD 156 (461)
Q Consensus 77 V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (461)
|++|..|.--..-+++.+..+.+.++++.+.+. .+-+|.|.-.+ .|..|.+-....
T Consensus 327 V~via~d~~~~gG~l~~~~~~K~ar~i~~a~~~-~~Plv~l~ds~--G~~~G~~~E~~G--------------------- 382 (522)
T 1x0u_A 327 VGIVANNPEEFGGSIDIDAADKAARFIRFCDAF-NIPLISLVDTP--GYVPGTDQEYKG--------------------- 382 (522)
T ss_dssp EEEEEECTTTGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEEC--CBCCSHHHHHTT---------------------
T ss_pred EEEEEECCCccCCCcCHHHHHHHHHHHHHHhhC-CCCEEEEecCC--CCCCchHHHHHH---------------------
Confidence 444444433334589999999999999988764 56777776654 354443221110
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhc----CCeEEEcCCceEeccccccCCCCC
Q 012534 157 VKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGH----GRYRIVTEKTLLAMPENGIGLFPD 232 (461)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~Lala----cD~ria~e~a~f~~pe~~lGl~P~ 232 (461)
.....-.++..+.....|+|++|-|.|.|||+-.... +|+++|.+++.+++ ..+
T Consensus 383 ---------------~~~~~Ak~l~~~~~~~vP~Isvi~g~~~GGg~~~~a~~a~~~D~v~a~p~A~i~v-------~gp 440 (522)
T 1x0u_A 383 ---------------IIRHGAKMLYAFAEATVPKITVIVRKSYGGAHIAMSIKSLGADLVYAWPTAEIAV-------TGP 440 (522)
T ss_dssp ---------------HHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHHTCCGGGTCSEEEECTTCEEES-------SCH
T ss_pred ---------------HHHHHHHHHHHHHhCCCCEEEEEeCCcccHHHHHhcccccCCCEEEEeCCCEEEe-------cCH
Confidence 2334445677788899999999999999997755544 99999988877765 222
Q ss_pred chHHHHHhcC-CCc----hHHHHHHhh--cCCCCCcHHHHHHcCccceecCCCChHH
Q 012534 233 VGFSYIAAKG-PGG----GSVGAYLGM--TGKRISTPSDALFAGLGTDYVPSGNLGS 282 (461)
Q Consensus 233 ~G~~~~L~rl-vG~----~~~a~~l~L--tG~~i~~A~eA~~~GLv~~vv~~~~l~~ 282 (461)
-|+...+-+. +-. ...-.++.- .-..-+ +..+.+.|+||.|+++.++..
T Consensus 441 egaa~Il~r~~i~~~~d~~~~~~~l~~~y~~~~~~-~~~~~~~G~iD~II~p~~tR~ 496 (522)
T 1x0u_A 441 EGAVRILYRKEIQQASNPDDVLKQRIAEYRKLFAN-PYWAAEKGLVDDVIEPKDTRR 496 (522)
T ss_dssp HHHHHHHTSSSSSSSSSSSSSSHHHHHHHHHHHSS-SHHHHHTTSSSEECCGGGHHH
T ss_pred HHHHHHHhhhhhhcccCHHHHHHHHHHHHHHhcCC-HHHHHhcCCCcEeECHHHHHH
Confidence 3333333222 110 000011110 001134 688999999999999877653
No 102
>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B
Probab=96.65 E-value=0.0067 Score=64.20 Aligned_cols=143 Identities=14% Similarity=0.102 Sum_probs=92.5
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCCCCCCCCCCCC
Q 012534 77 VAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVPLKCGD 156 (461)
Q Consensus 77 V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (461)
|.++..+..-..-++.....+.+..+++.+.+.. +-+|.|.-+| +++. .+- .... +...
T Consensus 123 v~V~a~D~tv~gGS~g~~~~~Ki~ra~e~A~~~~-lPvI~l~dSg-GARl-----~~q-----~~~~-~~~~-------- 181 (555)
T 3u9r_B 123 CMIVGNDATVKGGTYYPLTVKKHLRAQAIALENR-LPCIYLVDSG-GANL-----PRQ-----DEVF-PDRE-------- 181 (555)
T ss_dssp EEEEEECTTTGGGCBCHHHHHHHHHHHHHHHHHT-CCEEEEECCC-CBCG-----GGG-----GGTS-SSTT--------
T ss_pred EEEEEECCccccCCCCHHHHHHHHHHHHHHHHcC-CCEEEEECCC-CCCC-----CCc-----ceee-cccc--------
Confidence 5555555545667899999999999999998764 5566665544 3432 110 0000 0000
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcC-CceEeccccccCCCCCchH
Q 012534 157 VKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTE-KTLLAMPENGIGLFPDVGF 235 (461)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e-~a~f~~pe~~lGl~P~~G~ 235 (461)
.+...+..+..+.....|+|++|.|.|.|||.-....||++|+.+ ++.+ |+
T Consensus 182 ---------------~~~~i~~~~~~ls~~giP~Isvv~G~~~GGga~~~a~~d~vim~e~~a~i-------~~------ 233 (555)
T 3u9r_B 182 ---------------HFGRIFFNQANMSARGIPQIAVVMGSCTAGGAYVPAMSDETVMVREQATI-------FL------ 233 (555)
T ss_dssp ---------------STTHHHHHHHHHHHTTCCEEEEECSCCBGGGGHHHHTSSEEEEETTTCBC-------BS------
T ss_pred ---------------cHHHHHHHHHHHhcCCCCEEEEEecCCCccHHHHHHhCCceEEecCCceE-------EE------
Confidence 011112233346667899999999999999999999999988876 3433 32
Q ss_pred HHHHhcCCCchHHHHHHhhcCCCCCcHHHH-------HHcCccceecCCCC
Q 012534 236 SYIAAKGPGGGSVGAYLGMTGKRISTPSDA-------LFAGLGTDYVPSGN 279 (461)
Q Consensus 236 ~~~L~rlvG~~~~a~~l~LtG~~i~~A~eA-------~~~GLv~~vv~~~~ 279 (461)
-|+. ..+ ..||+.++ +++. ...|++|.++++++
T Consensus 234 -------aGP~--vik-~~~ge~~~-~e~LGGa~~h~~~sGv~d~v~~de~ 273 (555)
T 3u9r_B 234 -------AGPP--LVK-AATGEVVS-AEELGGADVHCKVSGVADHYAEDDD 273 (555)
T ss_dssp -------SCHH--HHH-HHHCCCCC-HHHHHBHHHHHHTTCSCSEEESSHH
T ss_pred -------ccHH--HHH-HHhcCccC-hhhccchhhhhhccCceeEEeCCHH
Confidence 1321 112 25789998 8877 68999999998654
No 103
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4
Probab=96.30 E-value=0.033 Score=58.71 Aligned_cols=138 Identities=16% Similarity=0.081 Sum_probs=87.3
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCCCCCCCCCCCC
Q 012534 77 VAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVPLKCGD 156 (461)
Q Consensus 77 V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (461)
|.++..+-.-..-++.....+.+.++++.+.+.. +-+|.|.-+| +++. .+-...
T Consensus 100 v~v~a~D~t~~gGS~g~~~~~Ki~r~~e~A~~~~-lPvI~l~dSg-GAR~-----qeg~~~------------------- 153 (527)
T 1vrg_A 100 VAVFSQDFTVMGGSLGEMHAKKIVKLLDLALKMG-IPVIGINDSG-GARI-----QEGVDA------------------- 153 (527)
T ss_dssp EEEEEECTTTGGGCBCHHHHHHHHHHHHHHHHHT-CCEEEEEEEC-SBCG-----GGTHHH-------------------
T ss_pred EEEEEEeccccCccccHHHHHHHHHHHHHHHHcC-CCEEEEECCC-CCCc-----cchhHH-------------------
Confidence 5555555444667899999999999999888764 4566665544 3433 221110
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCC-ceEeccccccCCCCCchH
Q 012534 157 VKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK-TLLAMPENGIGLFPDVGF 235 (461)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~-a~f~~pe~~lGl~P~~G~ 235 (461)
+..+-..+... . ......|+|++|.|.|.|||......||++|+.++ +.+++
T Consensus 154 ------------l~g~~~~~~~~-~-~~s~~iP~Isvv~Gp~~GG~a~s~al~D~vi~~~~~a~i~~------------- 206 (527)
T 1vrg_A 154 ------------LAGYGEIFLRN-T-LASGVVPQITVIAGPCAGGAVYSPALTDFIVMVDQTARMFI------------- 206 (527)
T ss_dssp ------------HHHHHHHHHHH-H-HHTTTSCEEEEEEEEEBGGGGHHHHHSSEEEEETTTCBCBS-------------
T ss_pred ------------HHHHHHHHHHH-H-HhCCCCCEEEEEeCCCchHHHHHHHcCCeEEEecCceEEEe-------------
Confidence 00111111122 1 23566999999999999999999999999999987 65332
Q ss_pred HHHHhcCCCchHHHHHHhhcCCCCCcH-----HHHH--HcCccceecCCC
Q 012534 236 SYIAAKGPGGGSVGAYLGMTGKRISTP-----SDAL--FAGLGTDYVPSG 278 (461)
Q Consensus 236 ~~~L~rlvG~~~~a~~l~LtG~~i~~A-----~eA~--~~GLv~~vv~~~ 278 (461)
-|++ ..+. .+|+.++ . .+.+ ..|++|.+++++
T Consensus 207 -------aGP~--vi~~-~~ge~v~-~e~lggae~~~~~~G~vd~vv~d~ 245 (527)
T 1vrg_A 207 -------TGPN--VIKA-VTGEEIS-QEDLGGAMVHNQKSGNAHFLADND 245 (527)
T ss_dssp -------SCHH--HHHH-HHCCCCC-HHHHHBHHHHHHTSCCCSEEESSH
T ss_pred -------cCHH--HHHH-HhCCCCC-ccccccHHHHhhcccceEEEecCH
Confidence 1321 2221 3466665 4 2333 599999999853
No 104
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*
Probab=95.84 E-value=0.033 Score=59.35 Aligned_cols=162 Identities=11% Similarity=-0.016 Sum_probs=94.5
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCCCCCCCCCCCC
Q 012534 77 VAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVPLKCGD 156 (461)
Q Consensus 77 V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (461)
|.++..+..-+.-++.....+.+.++++.+.+.. +-+|.|.-+| +++. .+ .........
T Consensus 108 V~V~a~D~tv~gGS~g~~~~~Ki~Ra~e~A~~~~-lPvI~l~dSg-GArl-----~~-qe~~~~~l~------------- 166 (588)
T 3gf3_A 108 VYIVASDNKKMAGAWVPGQAENLIRCSDAAKMMH-LPLIYLLNCS-GVEF-----PN-QDKVYPNRR------------- 166 (588)
T ss_dssp EEEEEECTTSGGGCBCTTHHHHHHHHHHHHHHHT-CCEEEEECCC-CBCG-----GG-HHHHSSSTT-------------
T ss_pred EEEEEECCcccCCCCCHHHHHHHHHHHHHHHHcC-CCEEEEEcCC-CcCc-----cc-ccccccchh-------------
Confidence 4444444444667899999999999999998754 5566666554 3443 11 000000000
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEeccccc--cCCCCCch
Q 012534 157 VKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENG--IGLFPDVG 234 (461)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~pe~~--lGl~P~~G 234 (461)
.+...+..+..+.....|+|++|-|.|.|||.-.++.+|++++.+++.+++.-.+ -|+-|.+
T Consensus 167 ---------------~~g~if~~~~~ls~~~iP~Isvv~Gp~~gGgAy~a~~~~vim~~~~a~i~~aGP~vI~~~~p~g- 230 (588)
T 3gf3_A 167 ---------------GGGTPFFRNSELNQLGIPVIVGIYGTNPAGGGYHSISPTILIAHQDANMAVGGAGILSGMNPKG- 230 (588)
T ss_dssp ---------------STTHHHHHHHHHHHTTCCEEEEECSEEETHHHHHHHSSSEEEEETTCEEESSCCC----------
T ss_pred ---------------hHHHHHHHHHHHhcCCCCEEEEEeCCCCchhhhHhhCCeEEEEECCcEEEecChhhhcccCccc-
Confidence 0011122234456678999999999999998877888888888889988874433 2211211
Q ss_pred HHHHHhcCC---CchHHHHHHhhcCCCCCcHHHHH--HcCccceecCCCC
Q 012534 235 FSYIAAKGP---GGGSVGAYLGMTGKRISTPSDAL--FAGLGTDYVPSGN 279 (461)
Q Consensus 235 ~~~~L~rlv---G~~~~a~~l~LtG~~i~~A~eA~--~~GLv~~vv~~~~ 279 (461)
. +.+.-+ ... ...+-..+.+.+. +.+.+ ..|++|.++++++
T Consensus 231 -~-~~~~~~~~~~~~-~~ge~~vs~eeLG-Ga~~h~~~sGv~d~~a~de~ 276 (588)
T 3gf3_A 231 -Y-IDDEAAEQIIAA-QIENSKLKVPAPG-SVPIHYDETGFFREVYQNDL 276 (588)
T ss_dssp --------CHHHHHH-HHHHHHTTCCCTT-BHHHHTTTSCCSCEEESSHH
T ss_pred -c-ccccchhhhhhh-hccccccChhhcc-chhhhccccccceEEeCCHH
Confidence 0 111100 011 1222225778887 67777 5999999998654
No 105
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4
Probab=95.54 E-value=0.1 Score=54.95 Aligned_cols=153 Identities=13% Similarity=0.081 Sum_probs=93.4
Q ss_pred EEcCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCCCCCCCCCCCCcch
Q 012534 81 TLDRPK-ALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVPLKCGDVKE 159 (461)
Q Consensus 81 tLnrP~-~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (461)
.=|+|. ..-+++++-.....+.++.++.. .+-+|.|.-.. .|..|.+-....
T Consensus 335 ia~~~~~~~G~~~~~~~~Kaar~i~~a~~~-~~Plv~lvDtp--G~~~G~~~E~~g------------------------ 387 (527)
T 1vrg_A 335 VANQPSVLAGVLDIDSSDKAARFIRFLDAF-NIPILTFVDTP--GYLPGVAQEHGG------------------------ 387 (527)
T ss_dssp EEECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEEC--CBCCCHHHHHTT------------------------
T ss_pred EEEcCcccCCCCCHHHHHHHHHHHHHHhhc-CCCeEEEecCC--CCcCchhhHHhH------------------------
Confidence 334444 33579999999999999888654 45666665442 355554322211
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhc----CCeEEEcCCceEeccccccCCCCCchH
Q 012534 160 ISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGH----GRYRIVTEKTLLAMPENGIGLFPDVGF 235 (461)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~Lala----cD~ria~e~a~f~~pe~~lGl~P~~G~ 235 (461)
.....-.++..+..+..|+|++|=|.|.|||+--... +|+++|.+++.++ +.++-|+
T Consensus 388 ------------~~~~~A~~~~a~~~~~vP~isvI~g~~~gGg~~am~~~~~~~d~~~a~p~a~~~-------Vm~pega 448 (527)
T 1vrg_A 388 ------------IIRHGAKLLYAYSEATVPKITVILRKAYGGAYIAMGSKHLGADMVLAWPSAEIA-------VMGPEGA 448 (527)
T ss_dssp ------------HHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEE-------SSCHHHH
T ss_pred ------------HHHHHHHHHHHHhcCCCCEEEEEeCCcccHHHHHhcCCCCCCCEEEEcCCCeEE-------ecCHHHH
Confidence 2333445667788899999999999998887744433 7887777666665 4433444
Q ss_pred HHHHhcC-----CCchHHH-HHHhh--cCCCCCcHHHHHHcCccceecCCCChH
Q 012534 236 SYIAAKG-----PGGGSVG-AYLGM--TGKRISTPSDALFAGLGTDYVPSGNLG 281 (461)
Q Consensus 236 ~~~L~rl-----vG~~~~a-~~l~L--tG~~i~~A~eA~~~GLv~~vv~~~~l~ 281 (461)
...+-+. --.. .. .++.- .-..-+ +..+.+.|+||.|+++.++.
T Consensus 449 a~Il~r~~~~~~~d~~-~~~~~~~~~y~~~~~~-p~~~~~~g~iD~II~p~~tR 500 (527)
T 1vrg_A 449 ANIIFKREIEASSNPE-ETRRKLIEEYKQQFAN-PYIAASRGYVDMVIDPRETR 500 (527)
T ss_dssp HHHHTHHHHHHSSCHH-HHHHHHHHHHHHHTSS-HHHHHHTTSSSEECCGGGHH
T ss_pred HHHHhhhhhhcccCHH-HHHHHHHHHHHHhhCC-HHHHHHcCCCCeeeCHHHHH
Confidence 3333221 0111 11 11221 111245 78999999999999986654
No 106
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=95.39 E-value=0.11 Score=54.82 Aligned_cols=157 Identities=13% Similarity=0.162 Sum_probs=95.7
Q ss_pred EEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCCCCCCCCCCC
Q 012534 77 VAVITLDRPK-ALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVPLKCG 155 (461)
Q Consensus 77 V~~ItLnrP~-~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 155 (461)
|++|- |+|. ..-+++.+-.....+.++.++.. .+-+|.|.-.. .|..|.+-.+..
T Consensus 349 Vgvia-n~~~~~~G~l~~~~a~Kaar~i~~a~~~-~iPlv~lvDt~--Gf~~G~~~E~~G-------------------- 404 (548)
T 2bzr_A 349 VGIVA-NQPTHFAGCLDINASEKAARFVRTCDCF-NIPIVMLVDVP--GFLPGTDQEYNG-------------------- 404 (548)
T ss_dssp EEEEE-ECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEEC--CBCCCHHHHHTT--------------------
T ss_pred EEEEE-ECCcccCCCCCHHHHHHHHHHHHHHHhc-CCCEEEEeecc--CCCCChHHHHhh--------------------
Confidence 44333 4444 33579999999999999988754 45666665442 466665433211
Q ss_pred CcchhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhh----cCCeEEEcCCceEeccccccCCCC
Q 012534 156 DVKEISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISG----HGRYRIVTEKTLLAMPENGIGLFP 231 (461)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~Lal----acD~ria~e~a~f~~pe~~lGl~P 231 (461)
.......++..+.....|+|++|=|.|.|||.--.. .+|+++|.++++++ +.+
T Consensus 405 ----------------i~~~ga~~l~a~~~~~VP~isvI~g~~~Ggg~~am~~~~~~~d~~~awp~a~i~-------Vmg 461 (548)
T 2bzr_A 405 ----------------IIRRGAKLLYAYGEATVPKITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIA-------VMG 461 (548)
T ss_dssp ----------------HHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEE-------SSC
T ss_pred ----------------HHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhccccCCCCEEEEcCCCEEE-------ecC
Confidence 333344566778889999999999999988775543 38887777776665 433
Q ss_pred CchHHHHHhcC-CCc------h-HHHH-HHhh--cCCCCCcHHHHHHcCccceecCCCChH
Q 012534 232 DVGFSYIAAKG-PGG------G-SVGA-YLGM--TGKRISTPSDALFAGLGTDYVPSGNLG 281 (461)
Q Consensus 232 ~~G~~~~L~rl-vG~------~-~~a~-~l~L--tG~~i~~A~eA~~~GLv~~vv~~~~l~ 281 (461)
+-|+...+-+. +-. . ...+ ++.- .-..-+ +..+.+.|+||.|+++.+..
T Consensus 462 pegaa~Il~r~~~~~~~~~g~~~~~~~~~~~~~y~~~~~~-p~~~a~~g~iD~II~p~~tR 521 (548)
T 2bzr_A 462 ASGAVGFVYRQQLAEAAANGEDIDKLRLRLQQEYEDTLVN-PYVAAERGYVGAVIPPSHTR 521 (548)
T ss_dssp HHHHHHHHTCCC----------CHHHHHHHHHHHHHHHSB-SHHHHHTTSSSEECCGGGHH
T ss_pred HHHHHHHHhhhHHhhhhcccccHHHHHHHHHHHHHHhhCC-HHHHHhcCCCceeeCHHHHH
Confidence 34444444332 100 0 0111 1211 001133 57799999999999987654
No 107
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=95.24 E-value=0.068 Score=56.30 Aligned_cols=154 Identities=12% Similarity=0.054 Sum_probs=95.0
Q ss_pred EEcCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCCCCCCCCCCCCcch
Q 012534 81 TLDRPK-ALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVPLKCGDVKE 159 (461)
Q Consensus 81 tLnrP~-~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (461)
.=|+|. ..-+++++-.....+.++.++.- ++-+|.|.-. ..|..|.+-.+..
T Consensus 331 ian~~~~~~G~~~~~~a~Kaar~i~~~~~~-~iPlv~lvDt--pGf~~G~~~E~~G------------------------ 383 (523)
T 1on3_A 331 VANQPSVMSGCLDINASDKAAEFVNFCDSF-NIPLVQLVDV--PGFLPGVQQEYGG------------------------ 383 (523)
T ss_dssp EEECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEE--CCBCCCHHHHHTT------------------------
T ss_pred EEecCCccCCCCCHHHHHHHHHHHHHHHhc-CCCeEEEEeC--CCcCcchHHHHhh------------------------
Confidence 334554 23579999999999999888654 4566666544 2466665433211
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhc----CCeEEEcCCceEeccccccCCCCCchH
Q 012534 160 ISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGH----GRYRIVTEKTLLAMPENGIGLFPDVGF 235 (461)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~Lala----cD~ria~e~a~f~~pe~~lGl~P~~G~ 235 (461)
.....-.++..+..+..|+|+.|=|.+.|||+--... +|+++|.+++.++ +.++-|+
T Consensus 384 ------------i~~~~A~~l~a~a~~~vP~itvI~g~~~Ggg~~am~~~~~~~d~~~a~p~a~~~-------Vm~pega 444 (523)
T 1on3_A 384 ------------IIRHGAKMLYAYSEATVPKITVVLRKAYGGSYLAMCNRDLGADAVYAWPSAEIA-------VMGAEGA 444 (523)
T ss_dssp ------------HHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHTTTCGGGTCSEEEECTTCEEE-------SSCHHHH
T ss_pred ------------HHHHHHHHHHHHhcCCCCEEEEEeCCcccHHHHHhcccCCCCCEEEEcCCCeEE-------ecCHHHH
Confidence 3344556777888999999999999999888755544 7777766666655 4444444
Q ss_pred HHHHhcCC----CchHHHH-HHhh--cCCCCCcHHHHHHcCccceecCCCChH
Q 012534 236 SYIAAKGP----GGGSVGA-YLGM--TGKRISTPSDALFAGLGTDYVPSGNLG 281 (461)
Q Consensus 236 ~~~L~rlv----G~~~~a~-~l~L--tG~~i~~A~eA~~~GLv~~vv~~~~l~ 281 (461)
...+-+.- ......+ ++.- .-..-+ +..+.+.|+||.|+++.++.
T Consensus 445 a~Il~r~~~~~~~d~~~~~~~~~~~y~~~~~~-p~~~a~~g~iD~II~p~~tR 496 (523)
T 1on3_A 445 ANVIFRKEIKAADDPDAMRAEKIEEYQNAFNT-PYVAAARGQVDDVIDPADTR 496 (523)
T ss_dssp HHHHTHHHHHHSSCHHHHHHHHHHHHHHHHSS-HHHHHHTTSSSEECCGGGHH
T ss_pred HHHHhhhhhhcccCHHHHHHHHHHHHHHhhCC-HHHHHhcCCCCEeeCHHHHH
Confidence 33332210 0000111 1211 111244 78899999999999986654
No 108
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}
Probab=95.04 E-value=0.11 Score=54.74 Aligned_cols=155 Identities=12% Similarity=0.112 Sum_probs=95.8
Q ss_pred EEEcCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCCCCCCCCCCCCcc
Q 012534 80 ITLDRPKA-LNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVPLKCGDVK 158 (461)
Q Consensus 80 ItLnrP~~-~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (461)
|.=|+|.. .-+++++-.....+.++..+.. ++-+|.|.-. ..|..|.+-.+..
T Consensus 342 vian~~~~~~G~l~~~~a~Kaarfi~lcd~~-~iPlv~lvDt--pGf~~G~~~E~~G----------------------- 395 (531)
T 3n6r_B 342 VVANQPLVLAGCLDIDSSRKAARFVRFCDAF-EIPLLTLIDV--PGFLPGTSQEYGG----------------------- 395 (531)
T ss_dssp EEEECTTTGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEE--CSBCCSHHHHHTT-----------------------
T ss_pred EEEecccccCCCCCHHHHHHHHHHHHHhhcc-CCCEEEEeCC--CCCCCCHHHHHhh-----------------------
Confidence 33455542 3579999999999999877754 4666666554 2355554332211
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhc----CCeEEEcCCceEeccccccCCCCCch
Q 012534 159 EISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGH----GRYRIVTEKTLLAMPENGIGLFPDVG 234 (461)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~Lala----cD~ria~e~a~f~~pe~~lGl~P~~G 234 (461)
.....-.++..+..+..|+|+.|=|.++|||.--... +|+++|.+++.++ +.++-|
T Consensus 396 -------------i~~~gAk~l~a~a~a~VP~itvI~g~~~Ggg~~am~~~~~~~d~~~awp~A~i~-------Vm~peg 455 (531)
T 3n6r_B 396 -------------VIKHGAKLLYAYGEATVPMVTVITRKAYGGAYVVMSSKHLRADFNYAWPTAEVA-------VMGAKG 455 (531)
T ss_dssp -------------HHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEE-------SSCHHH
T ss_pred -------------HHHHHHHHHHHHHhCCCCEEEEEcCCccchhhhhccCccCCCCeEEEcCCceEe-------cCCHHH
Confidence 4455567788899999999999999999888744332 8888777666665 433334
Q ss_pred HHHHH-hcCCCchHHHHHHh--hcCCCCCcHHHHHHcCccceecCCCChH
Q 012534 235 FSYIA-AKGPGGGSVGAYLG--MTGKRISTPSDALFAGLGTDYVPSGNLG 281 (461)
Q Consensus 235 ~~~~L-~rlvG~~~~a~~l~--LtG~~i~~A~eA~~~GLv~~vv~~~~l~ 281 (461)
+...+ .+-+-....-.++. +.-+.-+ +..|...|++|.|+++.+.-
T Consensus 456 aa~Il~r~~~~~~~~~~~~~~~y~~~~~~-p~~aa~~~~vD~vIdP~~TR 504 (531)
T 3n6r_B 456 ATEIIHRGDLGDPEKIAQHTADYEERFAN-PFVASERGFVDEVIQPRSTR 504 (531)
T ss_dssp HHHHHCCTTTTSTTHHHHHHHHHHHHHSS-SHHHHHHTSSSEECCGGGHH
T ss_pred HHHHHhcccccchhHHHHHHHHHHHHhcC-HHHHHhcCccCcccCHHHHH
Confidence 33333 22111000111111 1112234 66788999999999987765
No 109
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=93.53 E-value=0.92 Score=48.30 Aligned_cols=146 Identities=15% Similarity=0.054 Sum_probs=94.5
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCCCCCCCCCCCCcchhhhhhhhH
Q 012534 88 LNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVPLKCGDVKEISTQNQLS 167 (461)
Q Consensus 88 ~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (461)
.-.++++-.....+.++.++. .++-+|.|.-. ..|..|.+-.+..
T Consensus 384 ~G~l~~~~a~Kaarfi~~c~~-~~iPlv~lvDt--pGf~~G~~~E~~G-------------------------------- 428 (587)
T 1pix_A 384 GGKLYRQGLVKMNEFVTLCAR-DRLPIVWIQDT--TGIDVGNDAEKAE-------------------------------- 428 (587)
T ss_dssp TTEECHHHHHHHHHHHHHHHH-TTCCEEEEECC--CEECCSHHHHHTT--------------------------------
T ss_pred CCCcCHHHHHHHHHHHHHhhc-CCCCeEEEecC--CCCCCcHHHHHHH--------------------------------
Confidence 457999999999999987665 45677777655 3576665432211
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhc-----C--CeEEEcCCceEeccccccCCCCCchHHHHHh
Q 012534 168 EMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGH-----G--RYRIVTEKTLLAMPENGIGLFPDVGFSYIAA 240 (461)
Q Consensus 168 ~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~Lala-----c--D~ria~e~a~f~~pe~~lGl~P~~G~~~~L~ 240 (461)
.....-.++..+..+..|+|+.|=|.+.|||. ++++ + |+++|.+++.++ +.++-|....+-
T Consensus 429 ----i~~~gA~~~~a~a~a~vP~itvI~g~~~Ggg~-~am~~~~~~~~~d~~~a~p~A~~~-------Vm~pegaa~Il~ 496 (587)
T 1pix_A 429 ----LLGLGQSLIYSIQTSHIPQFEITLRKGTAAAH-YVLGGPQGNDTNAFSIGTAATEIA-------VMNGETAATAMY 496 (587)
T ss_dssp ----HHHHHHHHHHHHHTCCCCEEEEECSEEETTHH-HHTTCTTCTTTEEEEEECTTCEEE-------SSCHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHhCCCCEEEEEcCCCccHHH-HHhcCcccCcccceeeeccCCeEe-------cCCHHHHHHHHH
Confidence 44555678888999999999999999998874 5555 4 887777777665 433344433332
Q ss_pred cCC-------C--chHHH---HHHhh-cCCCCCcHHHHHHcCccceecCCCChH
Q 012534 241 KGP-------G--GGSVG---AYLGM-TGKRISTPSDALFAGLGTDYVPSGNLG 281 (461)
Q Consensus 241 rlv-------G--~~~~a---~~l~L-tG~~i~~A~eA~~~GLv~~vv~~~~l~ 281 (461)
+.- | ....+ .++.- --+..+ +..|.+.|+||.|+++.+..
T Consensus 497 r~~~~~~~~~g~~~~~~~~~~~~~~~~y~~~~~-p~~aa~~g~iD~VI~p~~tR 549 (587)
T 1pix_A 497 SRRLAKDRKAGKDLQPTIDKMNNLIQAFYTKSR-PKVCAELGLVDEIVDMNKIR 549 (587)
T ss_dssp HHHHHHHHHTTCCCHHHHHHHHHHHHHHHHTTS-HHHHHHHTSSSEECCTTTHH
T ss_pred hhhhhhhhhcCCChHHHHHHHHHHHHHHHHhCC-HHHHHhcCCCccccCHHHHH
Confidence 210 0 00000 11110 011466 89999999999999987764
No 110
>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B
Probab=93.22 E-value=0.68 Score=48.90 Aligned_cols=141 Identities=9% Similarity=0.050 Sum_probs=90.1
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCCCCCCCCCCCCcchhhhhhhhHH
Q 012534 89 NAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVPLKCGDVKEISTQNQLSE 168 (461)
Q Consensus 89 Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (461)
-+++++-.....+.++.++.- ++-+|.|.-.. .|..|.+-.+-.
T Consensus 366 G~l~~~~a~Kaarfi~~c~~~-~iPlv~lvDtp--Gf~~G~~~E~~G--------------------------------- 409 (555)
T 3u9r_B 366 GILFAEAAQKGAHFIELACQR-GIPLLFLQNIT--GFMVGQKYEAGG--------------------------------- 409 (555)
T ss_dssp SSBCHHHHHHHHHHHHHHHHH-TCCEEEEEEEC--CBCCSHHHHHTT---------------------------------
T ss_pred CccCHHHHHHHHHHHHHHhcC-CCCEEEEecCc--CCCCCHHHHHHH---------------------------------
Confidence 579999999999999888764 46777776653 366665432211
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhh----cCCeEEEcCCceEeccccccCCCCCchHHHHHhcCCC
Q 012534 169 MIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISG----HGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPG 244 (461)
Q Consensus 169 ~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~Lal----acD~ria~e~a~f~~pe~~lGl~P~~G~~~~L~rlvG 244 (461)
.....-.++.++..+..|+|+.|-|.++|||..-+. .+|+++|.+++.++. ..+-|....|-..
T Consensus 410 ---i~~~gAk~~~a~~~a~vP~itvi~g~~~Ggg~~am~~~~~~~d~~~a~p~A~i~V-------mgpegaa~il~~~-- 477 (555)
T 3u9r_B 410 ---IAKHGAKLVTAVACARVPKFTVLIGGSFGAGNYGMCGRAYDPRFLWMWPNARIGV-------MGGEQAAGVLAQV-- 477 (555)
T ss_dssp ---HHHHHHHHHHHHHHCCSCEEEEEEEEEETTHHHHTTCGGGCCSEEEECTTCEEES-------SCHHHHHHHHHHH--
T ss_pred ---HHHHHHHHHHHHHhCCCCEEEEEeCCccchhhHhhcCccCCCCeEEEcCCcEEEc-------CCHHHHHHHHHHH--
Confidence 344456678889999999999999999887654332 368888877777664 3333333332210
Q ss_pred chHHHHHHhhcCCC--------------------CCcHHHHHHcCccceecCCCChH
Q 012534 245 GGSVGAYLGMTGKR--------------------ISTPSDALFAGLGTDYVPSGNLG 281 (461)
Q Consensus 245 ~~~~a~~l~LtG~~--------------------i~~A~eA~~~GLv~~vv~~~~l~ 281 (461)
+-.++-..|+. .+ +..|-..|++|.|+++.+.-
T Consensus 478 ---~~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~-p~~aa~r~~vD~vIdP~~TR 530 (555)
T 3u9r_B 478 ---KREQAERAGQQLGVEEEAKIKAPILEQYEHQGH-PYYSSARLWDDGVIDPAQTR 530 (555)
T ss_dssp ---HHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHS-HHHHHHTTSSSCBCCGGGHH
T ss_pred ---HHHHHHhccCCCCcchHHHHHHHHHHHHHHhCC-HHHHhhccccCcccChHHHH
Confidence 00111111222 34 56667789999999887754
No 111
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A
Probab=92.20 E-value=0.82 Score=48.07 Aligned_cols=154 Identities=14% Similarity=0.158 Sum_probs=97.4
Q ss_pred EEEcCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCCCCCCCCCCCCcc
Q 012534 80 ITLDRPK-ALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVPLKCGDVK 158 (461)
Q Consensus 80 ItLnrP~-~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (461)
|.=|+|. ..-+++++-.....+.++..+.. ++-+|.|.-.. .|-.|.+-.+-
T Consensus 336 vian~~~~~~G~l~~~~a~Kaarfi~~c~~~-~iPlv~lvDtp--Gf~~G~~~E~~------------------------ 388 (530)
T 3iav_A 336 IVANQPMQFAGCLDITASEKAARFVRTCDAF-NVPVLTFVDVP--GFLPGVDQEHD------------------------ 388 (530)
T ss_dssp EEEECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEEC--CBCCCHHHHHT------------------------
T ss_pred EEEecCcccCCCCCHHHHHHHHHHHHHHHhc-CCCEEEEeeCC--CCCccHHHHHh------------------------
Confidence 4445554 23579999999999999877764 46677776542 37666653220
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhc-----CCeEEEcCCceEeccccccCCCCCc
Q 012534 159 EISTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGH-----GRYRIVTEKTLLAMPENGIGLFPDV 233 (461)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~Lala-----cD~ria~e~a~f~~pe~~lGl~P~~ 233 (461)
......-.++..+..+..|+|+.|-|.++|||. ++++ +|+++|.+++.++ +.++-
T Consensus 389 ------------gi~~~~Ak~l~a~a~a~vP~itvI~g~~~GGa~-~am~~~~~~~d~~~awp~a~~~-------Vm~~e 448 (530)
T 3iav_A 389 ------------GIIRRGAKLIFAYAEATVPLITVITRKAFGGAY-VVMGSKHLGADLNLAWPTAQIA-------VMGAQ 448 (530)
T ss_dssp ------------THHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHH-HHTTCGGGTCSEEEECTTCEEE-------SSCHH
T ss_pred ------------hHHHHHHHHHHHHHhCCCCEEEEEeCCcchHHH-HHhcCCCCCCCEEEEcCCceEe-------cCCHH
Confidence 155666678888999999999999999998766 5554 6887777776665 43333
Q ss_pred hHHHHHhc-CCC-----chHHHHHHh--hcCCCCCcHHHHHHcCccceecCCCChH
Q 012534 234 GFSYIAAK-GPG-----GGSVGAYLG--MTGKRISTPSDALFAGLGTDYVPSGNLG 281 (461)
Q Consensus 234 G~~~~L~r-lvG-----~~~~a~~l~--LtG~~i~~A~eA~~~GLv~~vv~~~~l~ 281 (461)
|+...+-+ -+- ....-.++. +.-+..+ +..|...|++|.|+++.+.-
T Consensus 449 gaa~il~r~~~~~~~~d~~~~~~~~~~~y~~~~~~-p~~aa~~~~vD~VIdP~~TR 503 (530)
T 3iav_A 449 GAVNILHRRTIADAGDDAEATRARLIQEYEDALLN-PYTAAERGYVDAVIMPSDTR 503 (530)
T ss_dssp HHHHHHTSTTTSTTCTTCHHHHHHHHHHHHHHHSS-SHHHHHTTSSSEECCGGGHH
T ss_pred HHHHHHhhhhhhhcccCHHHHHHHHHHHHHHhcCC-HHHHHhcCCCCcccCHHHHH
Confidence 44333322 111 000111111 1111235 67788999999999987764
No 112
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*
Probab=91.75 E-value=1.5 Score=46.68 Aligned_cols=146 Identities=15% Similarity=0.130 Sum_probs=91.6
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCCCCCCCCCCCCcchhhhhhhhHH
Q 012534 89 NAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVPLKCGDVKEISTQNQLSE 168 (461)
Q Consensus 89 Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (461)
.+++++-.....+.++..+.- ++-+|.|.-. ..|..|.+-.+-
T Consensus 387 G~l~~~~a~Kaarfi~lcd~f-~iPlv~lvDt--pGf~~G~~aE~~---------------------------------- 429 (588)
T 3gf3_A 387 GKLYRQGLIKMNEFVTLCARD-RIPLIWLQDT--TGIDVGDEAEKA---------------------------------- 429 (588)
T ss_dssp TEECHHHHHHHHHHHHHHHHT-TCCEEEEECC--CEECCSHHHHHT----------------------------------
T ss_pred CCcCHHHHHHHHHHHHHhhhc-CCCeEEEecC--CCCCCCHHHHHH----------------------------------
Confidence 468999999999999888764 5677777654 357777543321
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEeCCccchhhhHhhhcC-------CeEEEcCCceEeccccccCCCCCchHHHHHh-
Q 012534 169 MIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHG-------RYRIVTEKTLLAMPENGIGLFPDVGFSYIAA- 240 (461)
Q Consensus 169 ~~~~~~~~~~~~~~l~~~~kPvIAavnG~a~GgG~~Lalac-------D~ria~e~a~f~~pe~~lGl~P~~G~~~~L~- 240 (461)
...+...+++.++..+.+|+|+.|=|.+.|||. +++++ |+++|.+++.++ +.++-|+...+-
T Consensus 430 --Gi~~~gAk~l~a~a~a~VP~itvI~g~~~Ggg~-~am~~~~~~~~~~~~~awp~A~~s-------Vm~pEgaa~Il~~ 499 (588)
T 3gf3_A 430 --ELLGLGQSLIYSIENSKLPSLEITIRKASAAAH-YVLGGPQGNNTNVFSIGTGACEYY-------VMPGETAANAMYS 499 (588)
T ss_dssp --THHHHHHHHHHHHHHHCSCEEEEESSEEETTHH-HHTTCTTCTTTEEEEEECTTCEEE-------SSCHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHhCCCCEEEEEcCCccHHHH-HHhcccccCCccceEEECCCceEE-------eCCHHHHHHHHhh
Confidence 145555678888999999999999999988765 55543 255555555554 444444433332
Q ss_pred cC------CCch-----HHHHHHh-hcCCCCCcHHHHHHcCccceecCCCChHH
Q 012534 241 KG------PGGG-----SVGAYLG-MTGKRISTPSDALFAGLGTDYVPSGNLGS 282 (461)
Q Consensus 241 rl------vG~~-----~~a~~l~-LtG~~i~~A~eA~~~GLv~~vv~~~~l~~ 282 (461)
+. .|.. ....++. ---+..+ +.-|-+.|++|.|+++.+...
T Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~-p~~aA~r~~vD~VIdP~~TR~ 552 (588)
T 3gf3_A 500 RKLVKAKKAGEDLQPIIGKMNDMIQMYTDKSR-PKYCTEKGMVDEIVDMTEVRP 552 (588)
T ss_dssp HHHHHC-------CHHHHHHHHHHHHHHHTTS-HHHHHHTTSSSEECCGGGHHH
T ss_pred hHHhhhhccccccchHHHHHHHHHHHHHHhCC-HHHHHhcCCCCeeeCHHHHHH
Confidence 11 1100 0000111 0011346 888899999999999887653
No 113
>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 3pgq_A* 3tvu_A* 3tv5_A* 3tvw_A* 3tz3_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A
Probab=90.19 E-value=0.18 Score=54.89 Aligned_cols=36 Identities=19% Similarity=0.182 Sum_probs=32.6
Q ss_pred CCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEe
Q 012534 186 YKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLA 221 (461)
Q Consensus 186 ~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~ 221 (461)
-..|+|++|.|.|.|||.-+...||++|+.+++.+.
T Consensus 245 ~~IPqIsvV~G~c~GGgAY~paL~D~vImv~~s~if 280 (758)
T 3k8x_A 245 HDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQPII 280 (758)
T ss_dssp TTSCEEEEECSCEETHHHHHHHHTCEEEEETTCCEE
T ss_pred cCCCEEEEEccCCchHHHHHHhhCCEEEEECCceEE
Confidence 467999999999999999999999999999987543
No 114
>2x24_A Acetyl-COA carboxylase; fatty acid biosynthesis, ligase, lipid synthesis; HET: X24; 2.40A {Bos taurus} PDB: 3ff6_A* 3tdc_A*
Probab=87.72 E-value=0.33 Score=53.21 Aligned_cols=37 Identities=19% Similarity=0.245 Sum_probs=33.7
Q ss_pred CCCcEEEEeCCccchhhhHhhhcCCeEEEcCCceEec
Q 012534 186 YKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM 222 (461)
Q Consensus 186 ~~kPvIAavnG~a~GgG~~LalacD~ria~e~a~f~~ 222 (461)
...|+|++|-|.|.|||+.++..||++|+.+++.+.+
T Consensus 258 ~~iP~IsvV~G~~~GGgAy~~~lgD~vI~~~~a~i~l 294 (793)
T 2x24_A 258 DEIVTISMVSCRALGIGAYLVRLGQRVIQVENSHIIL 294 (793)
T ss_dssp HHSCEEEEECSEEETHHHHHHHHTCCEEEETTCEEES
T ss_pred CCCCEEEEEecCCchHHHHHHhhCCeEEEeccccEEe
Confidence 4699999999999999999999999999999876654
No 115
>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 3pgq_A* 3tvu_A* 3tv5_A* 3tvw_A* 3tz3_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A
Probab=81.43 E-value=2.9 Score=45.48 Aligned_cols=109 Identities=15% Similarity=0.207 Sum_probs=73.0
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCCCCCCCCCCCCcchhhhhhhhHH
Q 012534 89 NAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVPLKCGDVKEISTQNQLSE 168 (461)
Q Consensus 89 Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (461)
..++++-.....+.++.+++..++-+|.|.-. ..|..|.+-.+-.
T Consensus 447 G~l~pe~a~KaArfI~lcd~~f~iPLv~LvDt--pGf~~G~~aE~~G--------------------------------- 491 (758)
T 3k8x_A 447 QVWHPNSAFKTAQAINDFNNGEQLPMMILANW--RGFSGGQRDMFNE--------------------------------- 491 (758)
T ss_dssp TEECHHHHHHHHHHHHHHHHTSCCCEEECCCC--CEECCSHHHHHTT---------------------------------
T ss_pred CCCCHHHHHHHHHHHHHhhhccCCCEEEEecC--CCCCCCHHHHHcc---------------------------------
Confidence 47899999999999998887345667777544 4677776533211
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEeC--CccchhhhHhhhcCCeEEEcCCc--eEeccccccCCCCCchHHHHH
Q 012534 169 MIEVFTAEYSLICKISEYKKPYISLMD--GVTMGFGIGISGHGRYRIVTEKT--LLAMPENGIGLFPDVGFSYIA 239 (461)
Q Consensus 169 ~~~~~~~~~~~~~~l~~~~kPvIAavn--G~a~GgG~~LalacD~ria~e~a--~f~~pe~~lGl~P~~G~~~~L 239 (461)
.......++.++..+..|+|+.|- |.+.||++ +++.+. + ..+. .|..|...+|+.++-|+...+
T Consensus 492 ---i~k~gAkll~A~a~a~VP~itVI~RkGe~~GGA~-~am~~~--~-~ad~~~v~Awp~A~isVM~pEgaa~Il 559 (758)
T 3k8x_A 492 ---VLKYGSFIVDALVDYKQPIIIYIPPTGELRGGSW-VVVDPT--I-NADQMEMYADVNARAGVLEPQGMVGIK 559 (758)
T ss_dssp ---HHHHHHHHHHHHHTCCSCEEEEECTTCEEETHHH-HTTCGG--G-STTTEEEEEETTCEEESSCHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHhCCCCEEEEEecCCccchHHH-HHhCcc--c-CCCHHHHhcCCCCEEEccCHHHHHHHH
Confidence 445556788899999999999998 99988776 565532 1 1222 455555555665555554433
No 116
>2x24_A Acetyl-COA carboxylase; fatty acid biosynthesis, ligase, lipid synthesis; HET: X24; 2.40A {Bos taurus} PDB: 3ff6_A* 3tdc_A*
Probab=79.16 E-value=7.6 Score=42.56 Aligned_cols=103 Identities=13% Similarity=0.149 Sum_probs=68.0
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCccccCCChhhHHHHhhhcCCCCCCCCCCCCCCCcchhhhhhhhHH
Q 012534 89 NAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVPLKCGDVKEISTQNQLSE 168 (461)
Q Consensus 89 Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (461)
-.++++-.....+.+..++. .++-+|.|.-. ..|..|.+-..-
T Consensus 462 G~l~~~~a~KaarfI~~cd~-f~iPlv~LvDt--pGf~~G~~aE~~---------------------------------- 504 (793)
T 2x24_A 462 QVWFPDSAYKTAQAIKDFNR-EKLPLMIFANW--RGFSGGMKDMYD---------------------------------- 504 (793)
T ss_dssp TEECHHHHHHHHHHHHHHHT-TTCCEEEECCB--CEECCSHHHHHT----------------------------------
T ss_pred CcccHHHHHHHHHHHHHhcc-CCCCEEEEecC--CCCCCCHHHHHh----------------------------------
Confidence 47999999999999999975 45677777654 357766543221
Q ss_pred HHHHHHHHHHHHHHHhhCCCcEEEEe--CCccchhhhHhh---hcCCeEEEcCCceEeccccccCCCCCchH
Q 012534 169 MIEVFTAEYSLICKISEYKKPYISLM--DGVTMGFGIGIS---GHGRYRIVTEKTLLAMPENGIGLFPDVGF 235 (461)
Q Consensus 169 ~~~~~~~~~~~~~~l~~~~kPvIAav--nG~a~GgG~~La---lacD~ria~e~a~f~~pe~~lGl~P~~G~ 235 (461)
........++.++..+..|+|+.| .|.+.||++..+ +..|+. -.|..|...+|+.++-|+
T Consensus 505 --Gi~~~gAkll~A~a~a~VP~itvI~r~Ge~~GGa~~~~~~~~~~d~~-----ev~Awp~A~~~VM~pEga 569 (793)
T 2x24_A 505 --QVLKFGAYIVDGLRKYRQPVLIYIPPYAEVRGGSWAVMDTSINPLCI-----EMYADRESRASVLEPEGT 569 (793)
T ss_dssp --THHHHHHHHHHHHHTCCSCEEEEECTTCEEEHHHHHTTCGGGSTTTE-----EEEEETTCEEESSCHHHH
T ss_pred --hHHHHHHHHHHHHHhcCCCEEEEEecCCcccchhHHhhhcccCccHH-----HHhhhccCEEEecCHHHH
Confidence 144555678889999999999999 898877655333 234440 034445555555544444
No 117
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=61.93 E-value=18 Score=34.61 Aligned_cols=15 Identities=27% Similarity=0.592 Sum_probs=11.8
Q ss_pred hCCCcEEEEeCCccc
Q 012534 185 EYKKPYISLMDGVTM 199 (461)
Q Consensus 185 ~~~kPvIAavnG~a~ 199 (461)
...||||+..-|..-
T Consensus 224 ~~~KPVv~~k~G~~~ 238 (288)
T 1oi7_A 224 HMKKPVVGFIGGRSA 238 (288)
T ss_dssp HCCSCEEEEESCC--
T ss_pred cCCCCEEEEEecCCC
Confidence 579999999999876
No 118
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=58.38 E-value=20 Score=34.26 Aligned_cols=15 Identities=33% Similarity=0.592 Sum_probs=13.0
Q ss_pred hCCCcEEEEeCCccc
Q 012534 185 EYKKPYISLMDGVTM 199 (461)
Q Consensus 185 ~~~kPvIAavnG~a~ 199 (461)
...||||+..-|..-
T Consensus 224 ~~~KPVv~~k~G~~~ 238 (288)
T 2nu8_A 224 HVTKPVVGYIAGVTA 238 (288)
T ss_dssp HCCSCEEEEEECTTC
T ss_pred cCCCCEEEEEeCCCC
Confidence 579999999998775
No 119
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=55.01 E-value=18 Score=34.67 Aligned_cols=15 Identities=33% Similarity=0.587 Sum_probs=11.3
Q ss_pred hCCCcEEEEeCCccc
Q 012534 185 EYKKPYISLMDGVTM 199 (461)
Q Consensus 185 ~~~kPvIAavnG~a~ 199 (461)
...||||+..-|..-
T Consensus 229 ~~~KPVv~~k~G~~~ 243 (294)
T 2yv1_A 229 KMKKPVIGYIAGQSA 243 (294)
T ss_dssp TCSSCEEEEEECC--
T ss_pred hCCCCEEEEEecCCC
Confidence 379999999988665
No 120
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=48.74 E-value=29 Score=33.30 Aligned_cols=15 Identities=40% Similarity=0.716 Sum_probs=12.3
Q ss_pred hCCCcEEEEeCCccc
Q 012534 185 EYKKPYISLMDGVTM 199 (461)
Q Consensus 185 ~~~kPvIAavnG~a~ 199 (461)
...||||+..-|..-
T Consensus 232 ~~~KPVv~~k~G~s~ 246 (297)
T 2yv2_A 232 EFTKPVIAYIAGRTA 246 (297)
T ss_dssp SCCSCEEEEESCCC-
T ss_pred cCCCCEEEEEeCCCC
Confidence 578999999999765
No 121
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=43.13 E-value=38 Score=34.92 Aligned_cols=23 Identities=9% Similarity=0.088 Sum_probs=16.3
Q ss_pred HHHHHHHHhcCCCceEEEEEecC
Q 012534 99 YKSFLDEWESDPRVKCVLIEGSG 121 (461)
Q Consensus 99 L~~~l~~~~~d~~vr~vVltg~G 121 (461)
+.+.|+.+.+||++++|++.+.+
T Consensus 159 ~~D~l~~l~~Dp~T~~I~ly~E~ 181 (480)
T 3dmy_A 159 ALTALEMLSADEKSEVLAFVSKP 181 (480)
T ss_dssp HHHHHHHHHTCTTCCEEEEEESC
T ss_pred HHHHHHHHhcCCCCCEEEEEEec
Confidence 45556777777788888877764
No 122
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=43.11 E-value=31 Score=33.20 Aligned_cols=15 Identities=33% Similarity=0.598 Sum_probs=12.3
Q ss_pred hCCCcEEEEeCCccc
Q 012534 185 EYKKPYISLMDGVTM 199 (461)
Q Consensus 185 ~~~kPvIAavnG~a~ 199 (461)
...||||+..-|..-
T Consensus 236 ~~~KPVv~~k~G~s~ 250 (305)
T 2fp4_A 236 PKSKPVVSFIAGLTA 250 (305)
T ss_dssp TTCCCEEEEEECTTC
T ss_pred cCCCCEEEEEecCCc
Confidence 458999999988765
No 123
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=41.66 E-value=31 Score=33.77 Aligned_cols=15 Identities=20% Similarity=0.308 Sum_probs=12.5
Q ss_pred hCCCcEEEEeCCccc
Q 012534 185 EYKKPYISLMDGVTM 199 (461)
Q Consensus 185 ~~~kPvIAavnG~a~ 199 (461)
...||||+..-|.+-
T Consensus 249 ~~~KPVV~~kaGrs~ 263 (334)
T 3mwd_B 249 RLTKPIVCWCIGTCA 263 (334)
T ss_dssp SCCSCEEEEEECTTC
T ss_pred cCCCCEEEEEcCCCc
Confidence 378999999988765
No 124
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=36.27 E-value=37 Score=34.64 Aligned_cols=15 Identities=40% Similarity=0.521 Sum_probs=10.1
Q ss_pred CCCcEEEEeCCccch
Q 012534 186 YKKPYISLMDGVTMG 200 (461)
Q Consensus 186 ~~kPvIAavnG~a~G 200 (461)
..||||+..-|..--
T Consensus 228 ~~KPVv~~k~G~~~~ 242 (457)
T 2csu_A 228 KKKPIIALKAGKSES 242 (457)
T ss_dssp HHSCEEEEECC----
T ss_pred CCCCEEEEEcCCCcc
Confidence 589999999987643
No 125
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=26.85 E-value=54 Score=36.17 Aligned_cols=16 Identities=19% Similarity=0.266 Sum_probs=13.2
Q ss_pred hCCCcEEEEeCCccch
Q 012534 185 EYKKPYISLMDGVTMG 200 (461)
Q Consensus 185 ~~~kPvIAavnG~a~G 200 (461)
...||||+..-|.+--
T Consensus 735 ~~~KPVVa~kaGrsa~ 750 (829)
T 3pff_A 735 RLTKPIVCWCIGTCAT 750 (829)
T ss_dssp SCCSCEEEEEECSSTT
T ss_pred cCCCCEEEEEecCcCc
Confidence 5789999999887654
No 126
>3t6o_A Sulfate transporter/antisigma-factor antagonist S; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.10A {Planctomyces limnophilus}
Probab=20.63 E-value=1.4e+02 Score=23.70 Aligned_cols=57 Identities=16% Similarity=0.083 Sum_probs=39.9
Q ss_pred ccceEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEecCCCcc
Q 012534 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAF 125 (461)
Q Consensus 65 ~~~i~~~~~~~~V~~ItLnrP~~~Nal~~~m~~eL~~~l~~~~~d~~vr~vVltg~G~~~F 125 (461)
++.+.++. .+++.+|++..+ ...|+.....+|.+.+...-.+...+.|||--.+ =.|
T Consensus 4 ~~~i~~~~-~~~~~vv~l~G~--l~~ld~~~~~~l~~~l~~~l~~~~~~~vvlDls~-v~~ 60 (121)
T 3t6o_A 4 MADIRVTH-EAQVTVISFPAV--FQRLRETEVEQIASTFLAAMQGAQPRKVLIDLEG-VEF 60 (121)
T ss_dssp CCCCEEEE-ETTEEEEECCGG--GSEECHHHHHHHHHHHHHTTCCSSSCEEEEECTT-CCE
T ss_pred ccceeEEE-ECCEEEEEEccc--cccCchhhHHHHHHHHHHHHhhcCCCeEEEECCC-CCE
Confidence 45577776 689999999764 2235888889999888655433456888887665 344
Done!