BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012536
(461 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 191/418 (45%), Gaps = 53/418 (12%)
Query: 33 SEIFTTDPVNIEHILKTNFSNYGKGDYNWNLMRDLFGDGIFA------VDGDKWRHQRKL 86
+ + T P +++ L + + Y K + ++ +FG+ +F + ++W QR++
Sbjct: 35 TSVIVTSPESVKKFLMS--TKYNKDSKMYRALQTVFGERLFGQGLVSECNYERWHKQRRV 92
Query: 87 ASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLLKSSLDSIFKVGFGV 146
FS L F AE+L A + + MQD+L +++D + K FG+
Sbjct: 93 IDLAFSRSSLVSLMET-FNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGM 151
Query: 147 ELNSLSGSDDFGNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASL---KRNIKLID 203
E + L G+ +Q K + I R L ++L G L + +I+ +
Sbjct: 152 ETSMLLGAQKPLSQAVKLMLEG--ITASRNT-----LAKFLP-GKRKQLREVRESIRFLR 203
Query: 204 SFIFELIRCKREQMKNVELDRGKE---DILSRFLL--ESEKDPESMTDKYLRDITLNFII 258
+ ++ +RE +K RG+E DIL++ L E +D E + D + + F I
Sbjct: 204 QVGRDWVQRRREALK-----RGEEVPADILTQILKAEEGAQDDEGLLDNF-----VTFFI 253
Query: 259 AGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHY 318
AG +T+AN L + L + P I + +V E ++ L ++ +L Y
Sbjct: 254 AGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRL---------QY 304
Query: 319 LHAALSETLRLYPAVPVDGK-NAAEDDILPDGFKVKKGDGVNYMTYAMGRM-TYIWGEDA 376
L L E+LRLYP P G E++ L DG +V + + TY MGRM TY ED
Sbjct: 305 LSQVLKESLRLYP--PAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYF--EDP 360
Query: 377 EEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLV 434
F P+R+ G + + + F G R C G++FA ++K++ A LLQ F+LV
Sbjct: 361 LTFNPDRF---GPGAPKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLV 415
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 178/378 (47%), Gaps = 40/378 (10%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+F W+ + FS + ++ + + + A +L K+ A
Sbjct: 79 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 136
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 137 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 196
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 197 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 240
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+IAG +TT+ L++ Y L K+P + +KAA E
Sbjct: 241 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA-------E 293
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 294 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 350
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFA 414
GD + + + R IWG+D EEFRPER+ + F F G R CPG++FA
Sbjct: 351 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACPGQQFA 407
Query: 415 YRQMKILAAVLLQFFRFK 432
+ ++ ++L+ F F+
Sbjct: 408 LHEATLVLGMMLKHFDFE 425
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 181/383 (47%), Gaps = 50/383 (13%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD FGDG+F W+ + FS + ++ + + + A +L K+ A
Sbjct: 78 VRDFFGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 135
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 195
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 196 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 239
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+IAG +TT+ L++ Y L K+P + +KAA E
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA-------E 292
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 293 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 349
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESP-----YKFAAFQAGPRICP 409
GD + + + R IWG+D EEFRPER+ E+P + F F G R C
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERF--------ENPSAIPQHAFKPFGNGQRACI 401
Query: 410 GKEFAYRQMKILAAVLLQFFRFK 432
G++FA + ++ ++L+ F F+
Sbjct: 402 GQQFALHEATLVLGMMLKHFDFE 424
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 181/383 (47%), Gaps = 50/383 (13%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+F W+ + FS + ++ + + + A +L K+ A
Sbjct: 81 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 138
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 139 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 198
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 199 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 242
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+IAG +TT+ L++ Y L K+P + +KAA E
Sbjct: 243 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA-------E 295
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P VP A ED +L + ++K
Sbjct: 296 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTVPAFSLYAKEDTVLGGEYPLEK 352
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESP-----YKFAAFQAGPRICP 409
GD + + + R IWG+D EEFRPER+ E+P + F F G R C
Sbjct: 353 GDELMVLIPQLHRDKTIWGDDVEEFRPERF--------ENPSAIPQHAFKPFGNGQRACI 404
Query: 410 GKEFAYRQMKILAAVLLQFFRFK 432
G++FA + ++ ++L+ F F+
Sbjct: 405 GQQFALHEATLVLGMMLKHFDFE 427
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 177/378 (46%), Gaps = 40/378 (10%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+F W+ + FS + ++ + + + A +L K+ A
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 135
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 195
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 196 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 239
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+IAG +TT+ L++ Y L K+P + +KAA E
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA-------E 292
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 293 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 349
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFA 414
GD + + + R IWG+D EEFRPER+ + F F G R C GK+FA
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACIGKQFA 406
Query: 415 YRQMKILAAVLLQFFRFK 432
+ ++ ++L+ F F+
Sbjct: 407 LHEATLVLGMMLKHFDFE 424
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 177/378 (46%), Gaps = 40/378 (10%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+F W+ + FS + ++ + + + A +L K+ A
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 135
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 195
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 196 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 239
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+IAG +TT+ L++ Y L K+P + +KAA E
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA-------E 292
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 293 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 349
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFA 414
GD + + + R IWG+D EEFRPER+ + F F G R C G++FA
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACEGQQFA 406
Query: 415 YRQMKILAAVLLQFFRFK 432
+ ++ ++L+ F F+
Sbjct: 407 LHEATLVLGMMLKHFDFE 424
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 180/383 (46%), Gaps = 50/383 (13%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+F W+ + FS + ++ + + + A +L K+ A
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 135
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 195
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 196 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 239
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+IAG +TT+ L++ Y L K+P + +KAA E
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA-------E 292
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 293 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 349
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESP-----YKFAAFQAGPRICP 409
GD + + + R IWG+D EEFRPER+ E+P + F F G R C
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERF--------ENPSAIPQHAFKPFGNGQRACI 401
Query: 410 GKEFAYRQMKILAAVLLQFFRFK 432
G++FA + ++ ++L+ F F+
Sbjct: 402 GQQFALHEATLVLGMMLKHFDFE 424
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 180/383 (46%), Gaps = 50/383 (13%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+F W+ + FS + ++ + + + A +L K+ A
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 135
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 195
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 196 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 239
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+IAG +TT+ L++ Y L K+P + +KAA E
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA-------E 292
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 293 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 349
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESP-----YKFAAFQAGPRICP 409
GD + + + R IWG+D EEFRPER+ E+P + F F G R C
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERF--------ENPSAIPQHAFKPFGNGQRACI 401
Query: 410 GKEFAYRQMKILAAVLLQFFRFK 432
G++FA + ++ ++L+ F F+
Sbjct: 402 GQQFALHEATLVLGMMLKHFDFE 424
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 176/378 (46%), Gaps = 40/378 (10%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+F W+ + FS + ++ + + + A +L K+ A
Sbjct: 84 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 141
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 142 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRTNPDD 201
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L
Sbjct: 202 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--H 245
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+IAG +TT+ L++ Y L K+P + +KAA E
Sbjct: 246 GKDPETGEPLDDENIRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAA-------E 298
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 299 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 355
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFA 414
GD + + + R IWG+D EEFRPER+ + F F G R C G++FA
Sbjct: 356 GDEIMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACIGQQFA 412
Query: 415 YRQMKILAAVLLQFFRFK 432
+ ++ ++L+ F F+
Sbjct: 413 LHEATLVLGMMLKHFDFE 430
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 177/378 (46%), Gaps = 40/378 (10%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+F W+ + FS + ++ + + + A +L K+ A
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 135
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 195
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 196 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 239
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+IAG +TT+ L++ Y L K+P + +KAA E
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA-------E 292
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 293 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 349
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFA 414
GD + + + R IWG+D EEFRPER+ + F F G R C G++FA
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACIGQQFA 406
Query: 415 YRQMKILAAVLLQFFRFK 432
+ ++ ++L+ F F+
Sbjct: 407 LHEATLVLGMMLKHFDFE 424
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 180/383 (46%), Gaps = 50/383 (13%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+F W+ + FS + ++ + + + A +L K+ A
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 135
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 195
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 196 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 239
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+IAG +TT+ L++ Y L K+P + +KAA E
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA-------E 292
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 293 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 349
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESP-----YKFAAFQAGPRICP 409
GD + + + R IWG+D EEFRPER+ E+P + F F G R C
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERF--------ENPSAIPQHAFKPFGNGQRACI 401
Query: 410 GKEFAYRQMKILAAVLLQFFRFK 432
G++FA + ++ ++L+ F F+
Sbjct: 402 GQQFALHEATLVLGMMLKHFDFE 424
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 177/378 (46%), Gaps = 40/378 (10%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+F W+ + FS + ++ + + + A +L K+ A
Sbjct: 79 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 136
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 137 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 196
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 197 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 240
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+IAG +TT+ L++ Y L K+P + +KAA E
Sbjct: 241 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA-------E 293
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 294 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 350
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFA 414
GD + + + R IWG+D EEFRPER+ + F F G R C G++FA
Sbjct: 351 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACIGQQFA 407
Query: 415 YRQMKILAAVLLQFFRFK 432
+ ++ ++L+ F F+
Sbjct: 408 LHEATLVLGMMLKHFDFE 425
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 180/383 (46%), Gaps = 50/383 (13%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+F W+ + FS + ++ + + + A +L K+ A
Sbjct: 81 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 138
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 139 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 198
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 199 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 242
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+IAG +TT+ L++ Y L K+P + +KAA E
Sbjct: 243 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA-------E 295
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 296 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 352
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESP-----YKFAAFQAGPRICP 409
GD + + + R IWG+D EEFRPER+ E+P + F F G R C
Sbjct: 353 GDELMVLIPQLHRDKTIWGDDVEEFRPERF--------ENPSAIPQHAFKPFGNGQRACI 404
Query: 410 GKEFAYRQMKILAAVLLQFFRFK 432
G++FA + ++ ++L+ F F+
Sbjct: 405 GQQFALHEATLVLGMMLKHFDFE 427
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 177/378 (46%), Gaps = 40/378 (10%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+F W+ + FS + ++ + + + A +L K+ A
Sbjct: 79 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 136
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 137 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 196
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 197 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 240
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+IAG +TT+ L++ Y L K+P + +KAA E
Sbjct: 241 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA-------E 293
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 294 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPPFSLYAKEDTVLGGEYPLEK 350
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFA 414
GD + + + R IWG+D EEFRPER+ + F F G R C G++FA
Sbjct: 351 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACIGQQFA 407
Query: 415 YRQMKILAAVLLQFFRFK 432
+ ++ ++L+ F F+
Sbjct: 408 LHEATLVLGMMLKHFDFE 425
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 180/383 (46%), Gaps = 50/383 (13%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+F W+ + FS + ++ + A+ A +L K+ A
Sbjct: 81 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKWE-RLNA 138
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 139 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 198
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 199 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 242
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+IAG +TT+ L++ Y L K+P + +KAA E
Sbjct: 243 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA-------E 295
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 296 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTSPAFSLYAKEDTVLGGEYPLEK 352
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESP-----YKFAAFQAGPRICP 409
GD + + + R IWG+D EEFRPER+ E+P + F F G R C
Sbjct: 353 GDELMVLIPQLHRDKTIWGDDVEEFRPERF--------ENPSAIPQHAFKPFGNGQRACI 404
Query: 410 GKEFAYRQMKILAAVLLQFFRFK 432
G++FA + ++ ++L+ F F+
Sbjct: 405 GQQFALHEATLVLGMMLKHFDFE 427
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 180/383 (46%), Gaps = 50/383 (13%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+F W+ + FS + ++ + + + A +L K+ A
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 135
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 195
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 196 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 239
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+IAG +TT+ L++ Y L K+P + +KAA E
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA-------E 292
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 293 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 349
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESP-----YKFAAFQAGPRICP 409
GD + + + R IWG+D EEFRPER+ E+P + F + G R C
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERF--------ENPSAIPQHAFKPYGNGQRACI 401
Query: 410 GKEFAYRQMKILAAVLLQFFRFK 432
G++FA + ++ ++L+ F F+
Sbjct: 402 GQQFALHEATLVLGMMLKHFDFE 424
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 181/387 (46%), Gaps = 58/387 (14%)
Query: 64 MRDLFGDGIFAVDGDKWRHQRKLASYE------FSTKILRDFSSAVFRANAEKLTSKFSV 117
+RD GDG+F W H++ FS + ++ + + + A +L K+
Sbjct: 79 VRDFAGDGLFT----SWTHEKNWCKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE- 132
Query: 118 AAAAKQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYC 174
A + I++ + + + +LD+I GF NS F +A D++ N +
Sbjct: 133 RLNADEHIEVPEDMTRLTLDTIGLSGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA 192
Query: 175 RYVDVFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRF 233
D + E KR + +IK+++ + ++I ++ + +D+L+
Sbjct: 193 NPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHM 238
Query: 234 LLESEKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVR 290
L + KDPE+ + D+ +R + F+IAG +TT+ L++ Y L K+P + +KAA
Sbjct: 239 L--NGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA---- 292
Query: 291 EATEAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGF 350
E + D + + ++++ Y+ L+E LRL+P P A ED +L +
Sbjct: 293 ---EEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 346
Query: 351 KVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESP-----YKFAAFQAGP 405
++KGD + + + R IWG+D EEFRPER+ E+P + F F G
Sbjct: 347 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--------ENPSAIPQHAFKPFGNGQ 398
Query: 406 RICPGKEFAYRQMKILAAVLLQFFRFK 432
R C G++FA + ++ ++L+ F F+
Sbjct: 399 RACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 179/383 (46%), Gaps = 50/383 (13%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+F W+ + FS + ++ + + + A +L K+ A
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 135
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 195
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 196 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 239
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+IAG + T+ L++ Y L K+P + +KAA E
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHENTSGLLSFALYFLVKNPHVLQKAA-------E 292
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 293 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 349
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESP-----YKFAAFQAGPRICP 409
GD + + + R IWG+D EEFRPER+ E+P + F F G R C
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERF--------ENPSAIPQHAFKPFGNGQRACI 401
Query: 410 GKEFAYRQMKILAAVLLQFFRFK 432
G++FA + ++ ++L+ F F+
Sbjct: 402 GQQFALHEATLVLGMMLKHFDFE 424
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 176/378 (46%), Gaps = 40/378 (10%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+F W+ + FS + ++ + + + A +L K+ A
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 135
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 195
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 196 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 239
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+I G +TT+ L++ Y L K+P + +KAA E
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLICGHETTSGLLSFALYFLVKNPHVLQKAA-------E 292
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 293 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 349
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFA 414
GD + + + R IWG+D EEFRPER+ + F F G R C G++FA
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACIGQQFA 406
Query: 415 YRQMKILAAVLLQFFRFK 432
+ ++ ++L+ F F+
Sbjct: 407 LHEATLVLGMMLKHFDFE 424
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 180/383 (46%), Gaps = 50/383 (13%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+F W+ + FS + ++ + + + A +L K+ A
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 135
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 195
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 196 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 239
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+IAG +TT+ L++ Y L K+P + +KAA E
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA-------E 292
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 293 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 349
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESP-----YKFAAFQAGPRICP 409
GD + + + R IWG+D EEFRPER+ E+P + F + G R C
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERF--------ENPSAIPQHAFKPWGNGQRACI 401
Query: 410 GKEFAYRQMKILAAVLLQFFRFK 432
G++FA + ++ ++L+ F F+
Sbjct: 402 GQQFALHEATLVLGMMLKHFDFE 424
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 179/383 (46%), Gaps = 50/383 (13%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+F W+ + FS + ++ + + + A +L K+ A
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 135
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 195
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 196 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 239
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+IAG + T+ L++ Y L K+P + +KAA E
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAA-------E 292
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 293 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 349
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESP-----YKFAAFQAGPRICP 409
GD + + + R IWG+D EEFRPER+ E+P + F F G R C
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERF--------ENPSAIPQHAFKPFGNGQRACI 401
Query: 410 GKEFAYRQMKILAAVLLQFFRFK 432
G++FA + ++ ++L+ F F+
Sbjct: 402 GQQFALHEATLVLGMMLKHFDFE 424
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 179/381 (46%), Gaps = 46/381 (12%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+F W+ + FS + ++ + + + A +L K+ A
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 135
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 195
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 196 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 239
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+IAG +TT+ L++ Y L K+P + +KAA E
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA-------E 292
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 293 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 349
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQA---GPRICPGK 411
GD + + + R IWG+D EEFRPER F + S AF+ G R C G+
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPER------FENPSAIPQHAFKPHGNGQRACIGQ 403
Query: 412 EFAYRQMKILAAVLLQFFRFK 432
+FA + ++ ++L+ F F+
Sbjct: 404 QFALHEATLVLGMMLKHFDFE 424
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 176/378 (46%), Gaps = 40/378 (10%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+F W+ + FS + ++ + + + A +L K+ A
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 135
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 195
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 196 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 239
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+I G +TT+ L++ Y L K+P + +KAA E
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIQGHETTSGLLSFALYFLVKNPHVLQKAA-------E 292
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 293 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 349
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFA 414
GD + + + R IWG+D EEFRPER+ + F F G R C G++FA
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACIGQQFA 406
Query: 415 YRQMKILAAVLLQFFRFK 432
+ ++ ++L+ F F+
Sbjct: 407 LHEATLVLGMMLKHFDFE 424
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 179/383 (46%), Gaps = 50/383 (13%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+F W+ + FS + ++ + + + A +L K+ A
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 135
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 195
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 196 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 239
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+I G +TT+ L++ Y L K+P + +KAA E
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQKAA-------E 292
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 293 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 349
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESP-----YKFAAFQAGPRICP 409
GD + + + R IWG+D EEFRPER+ E+P + F F G R C
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERF--------ENPSAIPQHAFKPFGNGQRACI 401
Query: 410 GKEFAYRQMKILAAVLLQFFRFK 432
G++FA + ++ ++L+ F F+
Sbjct: 402 GQQFALHEATLVLGMMLKHFDFE 424
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 176/378 (46%), Gaps = 40/378 (10%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+F W+ + FS + ++ + + + A +L K+ A
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 135
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 195
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 196 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 239
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+I G +TT+ L++ Y L K+P + +KAA E
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIEGHETTSGLLSFALYFLVKNPHVLQKAA-------E 292
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 293 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 349
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFA 414
GD + + + R IWG+D EEFRPER+ + F F G R C G++FA
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACIGQQFA 406
Query: 415 YRQMKILAAVLLQFFRFK 432
+ ++ ++L+ F F+
Sbjct: 407 LHEATLVLGMMLKHFDFE 424
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 176/378 (46%), Gaps = 40/378 (10%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG F W+ + FS + ++ + + + A +L K+ A
Sbjct: 78 VRDFAGDGEFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 135
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 195
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 196 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 239
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+IAG +TT+ L++ Y L K+P + +KAA E
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA-------E 292
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 293 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 349
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFA 414
GD + + + R IWG+D EEFRPER+ + F F G R C G++FA
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACIGQQFA 406
Query: 415 YRQMKILAAVLLQFFRFK 432
+ ++ ++L+ F F+
Sbjct: 407 LHEATLVLGMMLKHFDFE 424
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 176/378 (46%), Gaps = 40/378 (10%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+F W+ + FS + ++ + + + A +L K+ A
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 135
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 195
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 196 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 239
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+I G +TT+ L++ Y L K+P + +KAA E
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIKGHETTSGLLSFALYFLVKNPHVLQKAA-------E 292
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 293 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 349
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFA 414
GD + + + R IWG+D EEFRPER+ + F F G R C G++FA
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACIGQQFA 406
Query: 415 YRQMKILAAVLLQFFRFK 432
+ ++ ++L+ F F+
Sbjct: 407 LHEATLVLGMMLKHFDFE 424
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 179/381 (46%), Gaps = 46/381 (12%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+F W+ + FS + ++ + + + A +L K+ A
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 135
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 195
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 196 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 239
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+IAG +TT+ L++ Y L K+P + +KAA E
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA-------E 292
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 293 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 349
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQA---GPRICPGK 411
GD + + + R IWG+D EEFRPER F + S AF+ G R C G+
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPER------FENPSAIPQHAFKPAGNGQRACIGQ 403
Query: 412 EFAYRQMKILAAVLLQFFRFK 432
+FA + ++ ++L+ F F+
Sbjct: 404 QFALHEATLVLGMMLKHFDFE 424
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 176/378 (46%), Gaps = 40/378 (10%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+F W+ + FS + ++ + + + A +L K+ A
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 135
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 195
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 196 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 239
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+I G +TT+ L++ Y L K+P + +KAA E
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIHGHETTSGLLSFALYFLVKNPHVLQKAA-------E 292
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 293 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 349
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFA 414
GD + + + R IWG+D EEFRPER+ + F F G R C G++FA
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACIGQQFA 406
Query: 415 YRQMKILAAVLLQFFRFK 432
+ ++ ++L+ F F+
Sbjct: 407 LHEATLVLGMMLKHFDFE 424
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 179/383 (46%), Gaps = 50/383 (13%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+F W+ + FS + ++ + + + A +L K+ A
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 135
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 195
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 196 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 239
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+IAG + T+ L++ Y L K+P + +KAA E
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAA-------E 292
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 293 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 349
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESP-----YKFAAFQAGPRICP 409
GD + + + R IWG+D EEFRPER+ E+P + F F G R C
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERF--------ENPSAIPQHAFKPFGNGQRACI 401
Query: 410 GKEFAYRQMKILAAVLLQFFRFK 432
G++FA + ++ ++L+ F F+
Sbjct: 402 GQQFALHEATLVLGMMLKHFDFE 424
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 179/383 (46%), Gaps = 50/383 (13%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+ W+ + FS + ++ + + + A +L K+ A
Sbjct: 78 VRDFAGDGLATSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 135
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 195
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 196 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 239
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+IAG +TT+ L++ Y L K+P + +KAA E
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA-------E 292
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 293 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 349
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESP-----YKFAAFQAGPRICP 409
GD + + + R IWG+D EEFRPER+ E+P + F F G R C
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERF--------ENPSAIPQHAFKPFGNGQRACI 401
Query: 410 GKEFAYRQMKILAAVLLQFFRFK 432
G++FA + ++ ++L+ F F+
Sbjct: 402 GQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 176/378 (46%), Gaps = 40/378 (10%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+ W+ + FS + ++ + + + A +L K+ A
Sbjct: 79 VRDFAGDGLLTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 136
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 137 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 196
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 197 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 240
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+IAG ++T+ L++ Y L K+P + +KAA E
Sbjct: 241 GKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAA-------E 293
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 294 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 350
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFA 414
GD + + + R IWG+D EEFRPER+ + F F G R C G++FA
Sbjct: 351 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACIGQQFA 407
Query: 415 YRQMKILAAVLLQFFRFK 432
+ ++ ++L+ F F+
Sbjct: 408 LHEATLVLGMMLKHFDFE 425
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 176/378 (46%), Gaps = 40/378 (10%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+ W+ + FS + ++ + + + A +L K+ A
Sbjct: 78 VRDFAGDGLLTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 135
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 195
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 196 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 239
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+IAG ++T+ L++ Y L K+P + +KAA E
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAA-------E 292
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 293 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 349
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFA 414
GD + + + R IWG+D EEFRPER+ + F F G R C G++FA
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACIGQQFA 406
Query: 415 YRQMKILAAVLLQFFRFK 432
+ ++ ++L+ F F+
Sbjct: 407 LHEATLVLGMMLKHFDFE 424
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 176/378 (46%), Gaps = 40/378 (10%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+ W+ + FS + ++ + + + A +L K+ A
Sbjct: 78 VRDFAGDGLLTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 135
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 195
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 196 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 239
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+IAG ++T+ L++ Y L K+P + +KAA E
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAA-------E 292
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 293 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 349
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFA 414
GD + + + R IWG+D EEFRPER+ + F F G R C G++FA
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACIGQQFA 406
Query: 415 YRQMKILAAVLLQFFRFK 432
+ ++ ++L+ F F+
Sbjct: 407 LHEATLVLGMMLKHFDFE 424
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 176/378 (46%), Gaps = 40/378 (10%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+F W+ + FS + ++ + + + A +L K+ A
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 135
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 195
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 196 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 239
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + +IAG +TT+ L++ Y L K+P + +KAA E
Sbjct: 240 GKDPETGEPLDDENIRYQIITELIAGHETTSGLLSFALYFLVKNPHVLQKAA-------E 292
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 293 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 349
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFA 414
GD + + + R IWG+D EEFRPER+ + F F G R C G++FA
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACIGQQFA 406
Query: 415 YRQMKILAAVLLQFFRFK 432
+ ++ ++L+ F F+
Sbjct: 407 LHEATLVLGMMLKHFDFE 424
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 175/378 (46%), Gaps = 40/378 (10%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RDL GDG+F W+ + FS + ++ + + + A +L K+ A
Sbjct: 79 VRDLAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 136
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 137 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLRRANPDD 196
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 197 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 240
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+ AG + T+ L++ Y L K+P +KAA E
Sbjct: 241 GKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAA-------E 293
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 294 EAARVLVD---PVPSHKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 350
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFA 414
GD + + + R +WG+D EEFRPER+ + F F G R C G++FA
Sbjct: 351 GDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACIGQQFA 407
Query: 415 YRQMKILAAVLLQFFRFK 432
+ ++ ++L+ F F+
Sbjct: 408 LHEATLVLGMMLKHFDFE 425
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 171/377 (45%), Gaps = 30/377 (7%)
Query: 71 GIFAVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDV 130
I + ++W+ R L S F++ L++ + + + L A + + ++DV
Sbjct: 96 AISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQY-GDVLVRNLRREAETGKPVTLKDV 154
Query: 131 LLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKAFDDSNFI-VYCRYVDVFWELKRYLNI 189
S+D I FGV ++SL+ D + TK +F+ + + VF L L +
Sbjct: 155 FGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEV 214
Query: 190 GMEASLKRNIKLIDSFIFELIRCKREQMKNVELD---RGKEDILSRFLLESEKDPESMTD 246
NI + + +R ++MK L+ + + D L + +++S+ E+ +
Sbjct: 215 -------LNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFL-QLMIDSQNSKETESH 266
Query: 247 KYLRDITLN-----FIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCA 301
K L D+ L FI AG +TT++ L++ Y L HP +Q+K ++ +
Sbjct: 267 KALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTY 326
Query: 302 DEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYM 361
D + +M YL ++ETLRL+P + + + + D+ +G + KG V
Sbjct: 327 D---------TVLQMEYLDMVVNETLRLFP-IAMRLERVCKKDVEINGMFIPKGVVVMIP 376
Query: 362 TYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFAYRQMKIL 421
+YA+ R W E E+F PER+ + PY + F +GPR C G FA MK+
Sbjct: 377 SYALHRDPKYWTE-PEKFLPERFSKKNK-DNIDPYIYTPFGSGPRNCIGMRFALMNMKLA 434
Query: 422 AAVLLQFFRFKLVDETK 438
+LQ F FK ET+
Sbjct: 435 LIRVLQNFSFKPCKETQ 451
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 170/377 (45%), Gaps = 30/377 (7%)
Query: 71 GIFAVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDV 130
I + ++W+ R L S F++ L++ + + L A + + ++DV
Sbjct: 97 AISIAEDEEWKRLRSLLSPTFTSGKLKEMV-PIIAQYGDVLVRNLRREAETGKPVTLKDV 155
Query: 131 LLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKAFDDSNFI-VYCRYVDVFWELKRYLNI 189
S+D I FGV ++SL+ D + TK +F+ + + VF L L +
Sbjct: 156 FGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEV 215
Query: 190 GMEASLKRNIKLIDSFIFELIRCKREQMKNVELD---RGKEDILSRFLLESEKDPESMTD 246
NI + + +R ++MK L+ + + D L + +++S+ E+ +
Sbjct: 216 -------LNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFL-QLMIDSQNSKETESH 267
Query: 247 KYLRDITLN-----FIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCA 301
K L D+ L FI AG +TT++ L++ Y L HP +Q+K ++ +
Sbjct: 268 KALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTY 327
Query: 302 DEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYM 361
D + +M YL ++ETLRL+P + + + + D+ +G + KG V
Sbjct: 328 D---------TVLQMEYLDMVVNETLRLFP-IAMRLERVCKKDVEINGMFIPKGVVVMIP 377
Query: 362 TYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFAYRQMKIL 421
+YA+ R W E E+F PER+ + PY + F +GPR C G FA MK+
Sbjct: 378 SYALHRDPKYWTE-PEKFLPERFSKKNK-DNIDPYIYTPFGSGPRNCIGMRFALMNMKLA 435
Query: 422 AAVLLQFFRFKLVDETK 438
+LQ F FK ET+
Sbjct: 436 LIRVLQNFSFKPCKETQ 452
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 171/377 (45%), Gaps = 30/377 (7%)
Query: 71 GIFAVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDV 130
I + ++W+ R L S F++ L++ + + + L A + + ++DV
Sbjct: 95 AISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQY-GDVLVRNLRREAETGKPVTLKDV 153
Query: 131 LLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKAFDDSNFI-VYCRYVDVFWELKRYLNI 189
S+D I FGV ++SL+ D + TK +F+ + + VF L L +
Sbjct: 154 FGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEV 213
Query: 190 GMEASLKRNIKLIDSFIFELIRCKREQMKNVELD---RGKEDILSRFLLESEKDPESMTD 246
NI + + +R ++MK L+ + + D L + +++S+ E+ +
Sbjct: 214 -------LNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFL-QLMIDSQNSKETESH 265
Query: 247 KYLRDITLN-----FIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCA 301
K L D+ L FI AG +TT++ L++ Y L HP +Q+K ++ +
Sbjct: 266 KALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTY 325
Query: 302 DEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYM 361
D + +M YL ++ETLRL+P + + + + D+ +G + KG V
Sbjct: 326 D---------TVLQMEYLDMVVNETLRLFP-IAMRLERVCKKDVEINGMFIPKGVVVMIP 375
Query: 362 TYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFAYRQMKIL 421
+YA+ R W E E+F PER+ + PY + F +GPR C G FA MK+
Sbjct: 376 SYALHRDPKYWTE-PEKFLPERFSKKNK-DNIDPYIYTPFGSGPRNCIGMRFALMNMKLA 433
Query: 422 AAVLLQFFRFKLVDETK 438
+LQ F FK ET+
Sbjct: 434 LIRVLQNFSFKPCKETQ 450
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 178/383 (46%), Gaps = 50/383 (13%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+ W+ + FS + ++ + + + A +L K+ A
Sbjct: 78 VRDFAGDGLATSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 135
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 195
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 196 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 239
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+IAG + T+ L++ Y L K+P + +KAA E
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAA-------E 292
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 293 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 349
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESP-----YKFAAFQAGPRICP 409
GD + + + R IWG+D EEFRPER+ E+P + F F G R C
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERF--------ENPSAIPQHAFKPFGNGQRACI 401
Query: 410 GKEFAYRQMKILAAVLLQFFRFK 432
G++FA + ++ ++L+ F F+
Sbjct: 402 GQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 178/383 (46%), Gaps = 50/383 (13%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+F W+ + FS + ++ + + + A +L K+ A
Sbjct: 79 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 136
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 137 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 196
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 197 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 240
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+ AG + T+ L++ Y L K+P + +KAA E
Sbjct: 241 GKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAA-------E 293
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 294 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEK 350
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESP-----YKFAAFQAGPRICP 409
GD + + + R IWG+D EEFRPER+ E+P + F F G R C
Sbjct: 351 GDELMVLIPQLHRDKTIWGDDVEEFRPERF--------ENPSAIPQHAFKPFGNGQRACI 402
Query: 410 GKEFAYRQMKILAAVLLQFFRFK 432
G++FA + ++ ++L+ F F+
Sbjct: 403 GQQFALHEATLVLGMMLKHFDFE 425
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 178/383 (46%), Gaps = 50/383 (13%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+F W+ + FS + ++ + + + A +L K+ A
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 135
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDD 195
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 196 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 239
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+ AG + T+ L++ Y L K+P + +KAA E
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAA-------E 292
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 293 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEK 349
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESP-----YKFAAFQAGPRICP 409
GD + + + R IWG+D EEFRPER+ E+P + F F G R C
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERF--------ENPSAIPQHAFKPFGNGQRACI 401
Query: 410 GKEFAYRQMKILAAVLLQFFRFK 432
G++FA + ++ ++L+ F F+
Sbjct: 402 GQQFALHEATLVLGMMLKHFDFE 424
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 178/383 (46%), Gaps = 50/383 (13%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+ W+ R + S + ++ + + + A +L K+ +
Sbjct: 79 VRDFAGDGLATSWTHEKNWKKARNILLPRLSQQAMKGYHAMMVDI-AVQLVQKWE-RLNS 136
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF +NS F +A D+ N + D
Sbjct: 137 DEHIEVPEDMTRLTLDTIGLCGFNYRINSFYRDQPHPFITSMVRALDEVMNKLQRANPDD 196
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L
Sbjct: 197 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--H 240
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+IAG +TT+ LT+ Y L K+P + +KAA E
Sbjct: 241 GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLTFALYFLVKNPHVLQKAA-------E 293
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LR++P P A ED +L + ++K
Sbjct: 294 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRIWPTAPAFSLYAKEDTMLGGEYPLEK 350
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESP-----YKFAAFQAGPRICP 409
GD + + + R +WG+D EEFRPER+ E+P + F F G R C
Sbjct: 351 GDELMVLIPQLHRDKTVWGDDVEEFRPERF--------ENPSAIPQHAFKPFGNGQRACI 402
Query: 410 GKEFAYRQMKILAAVLLQFFRFK 432
G++FA + ++ ++L+ F F+
Sbjct: 403 GQQFALHEATLVLGMMLKHFDFE 425
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 178/391 (45%), Gaps = 68/391 (17%)
Query: 65 RDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAK 122
RD GDG+F W+ + FS + ++ + + + A +L K+ A
Sbjct: 79 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNAD 136
Query: 123 QAIDMQDVLLKSSLDSIFKVGFGVELNS-------------LSGSDDFGNQFTKAFDDSN 169
+ I++ + + + +LD+I GF NS + D+ N+ +A D
Sbjct: 137 EYIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFIISMIRALDEVMNKLQRANPDD- 195
Query: 170 FIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDI 229
+ E KR + +IK+++ + ++I ++ + +D+
Sbjct: 196 --------PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDL 233
Query: 230 LSRFLLESEKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAA 286
L++ L + KDPE+ + D + + F+IAG +TT+ L++ Y L K+P + +K A
Sbjct: 234 LTQML--NGKDPETGEPLDDGNISYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKVA 291
Query: 287 LDVREATEAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDIL 346
EAT + D + + ++++ Y+ L+E LRL+P P A ED +L
Sbjct: 292 ---EEAT----RVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 347 PDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESP-----YKFAAF 401
+ ++KGD V + + R IWG+D EEFRPER+ E+P + F F
Sbjct: 342 GGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERF--------ENPSAIPQHAFKPF 393
Query: 402 QAGPRICPGKEFAYRQMKILAAVLLQFFRFK 432
G R C G++FA + ++ ++L+ F F+
Sbjct: 394 GNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 174/378 (46%), Gaps = 40/378 (10%)
Query: 64 MRDLFGDGIFA--VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAA 121
+RD GDG+F W+ + FS + ++ + + + A +L K+ A
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI-AVQLVQKWE-RLNA 135
Query: 122 KQAIDMQDVLLKSSLDSIFKVGFGVELNSL--SGSDDFGNQFTKAFDDS-NFIVYCRYVD 178
+ I++ + + + +LD+I GF NS F +A D++ N + D
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLRRANPDD 195
Query: 179 VFW-ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ E KR + +IK+++ + ++I ++ + +D+L+ L +
Sbjct: 196 PAYDENKR--------QFQEDIKVMNDLVDKIIADRKASGEQ------SDDLLTHML--N 239
Query: 238 EKDPES---MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
KDPE+ + D+ +R + F+ AG + T+ L++ Y L K+P +KAA E
Sbjct: 240 GKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAA-------E 292
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
+ D + + ++++ Y+ L+E LRL+P P A ED +L + ++K
Sbjct: 293 EAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 349
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFA 414
GD + + + R IWG+D EEFRPER+ + F F G R C G++FA
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ---HAFKPFGNGQRACIGQQFA 406
Query: 415 YRQMKILAAVLLQFFRFK 432
+ ++ ++L+ F F+
Sbjct: 407 LHEATLVLGMMLKHFDFE 424
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 115/255 (45%), Gaps = 17/255 (6%)
Query: 181 WELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEKD 240
W L +L + R + I ++ I+ +R+ + ++ DIL L + KD
Sbjct: 191 WLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQSQEKID------DILQTLLDATYKD 244
Query: 241 PESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLC 300
+TD + + + ++AG+ T++ T W + L + +Q+K L+ Q +C
Sbjct: 245 GRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLE-------QKTVC 297
Query: 301 ADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNY 360
+ L T L+ ++ L + ETLRL P + + + A + G+ + G V
Sbjct: 298 GENLPPL-TYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTV-AGYTIPPGHQVCV 355
Query: 361 MTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFAYRQMKI 420
R+ W E +F P+R+L + E + + F AG C G+ FAY Q+K
Sbjct: 356 SPTVNQRLKDSWVERL-DFNPDRYLQDNPASGEK-FAYVPFGAGRHRCIGENFAYVQIKT 413
Query: 421 LAAVLLQFFRFKLVD 435
+ + +L+ + F L+D
Sbjct: 414 IWSTMLRLYEFDLID 428
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 119/265 (44%), Gaps = 18/265 (6%)
Query: 170 FIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDI 229
F + Y+ + L L + +R L+ + + ++I+ +++Q + +ED
Sbjct: 171 FPWFETYIQGLFSLPIPLPNTLFGKSQRARALLLAELEKIIKARQQQPPS------EEDA 224
Query: 230 LSRFLLESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDV 289
L L + + + ++ L+D L + AG +T + L+ F +L +H D+
Sbjct: 225 LGILLAARDDNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHS--------DI 276
Query: 290 REATEAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDG 349
RE + N + ++ +T L+KM YL L E LRL P V + +D G
Sbjct: 277 RERVRQEQNKL--QLSQELTAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQF-QG 333
Query: 350 FKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICP 409
F KG V+Y ++ D E+F PER+ +G P+ F G R C
Sbjct: 334 FHFPKGWLVSYQISQTHADPDLY-PDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECL 392
Query: 410 GKEFAYRQMKILAAVLLQFFRFKLV 434
GKEFA +MK+ A L+Q F + L+
Sbjct: 393 GKEFARLEMKLFATRLIQQFDWTLL 417
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 155/391 (39%), Gaps = 36/391 (9%)
Query: 61 WNLMRDLFG-DGIFAVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAA 119
W + L G +G+ +G R QR+ F + + + A LT ++
Sbjct: 92 WESLEGLLGKEGVATANGPLHRRQRRTIQPAFRLDAIPAYGP-IMEEEAHALTERWQPGK 150
Query: 120 AAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKAFDDSNFIVYCRYVDV 179
+ V ++ + + + + D+ + A +Y R V
Sbjct: 151 TVDATSESFRVAVRVAARCLLRGQY---------MDERAERLCVALATVFRGMYRRMVVP 201
Query: 180 FWELKRYLNIGMEASLKRNIKLIDSFIF--ELIRCKREQMKNVELDRGKEDILSRFLLES 237
L R + + A+ + N L D + E+I +R + +D+L+ L
Sbjct: 202 LGPLYR---LPLPANRRFNDALADLHLLVDEIIAERRASGQK------PDDLLTALLEAK 252
Query: 238 EKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQG 297
+ + + + ++ + D + + G +T A+T+ W L HP + A +R+ EA
Sbjct: 253 DDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHP----EHADRIRDEVEAVT 308
Query: 298 NLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDG 357
+ V + K+ + + E +RL PAV V + A + L G+++ G
Sbjct: 309 G------GRPVAFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESEL-GGYRIPAGAD 361
Query: 358 VNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFAYRQ 417
+ Y YA+ R + +D EF P+RWL Y F AG R CP F+ Q
Sbjct: 362 IIYSPYAIQRDPKSY-DDNLEFDPDRWLPERAANVPK-YAMKPFSAGKRKCPSDHFSMAQ 419
Query: 418 MKILAAVLLQFFRFKLVDETKEATYRTMFTL 448
+ ++ A L +RF+ V + +A R TL
Sbjct: 420 LTLITAALATKYRFEQVAGSNDAV-RVGITL 449
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 13/188 (6%)
Query: 242 ESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCA 301
+ ++ K L +A +TTAN+L W Y L ++P Q + +V+ A
Sbjct: 277 DHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRA 336
Query: 302 DEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYM 361
++ L M YL A L E++RL P+VP + + +L + + + KG +
Sbjct: 337 ED---------LRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGE-YALPKGTVLTLN 386
Query: 362 TYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFAYRQMKIL 421
T +G + ED+ +FRPERWL + +P+ F G R+C G+ A Q+ +
Sbjct: 387 TQVLGSSEDNF-EDSHKFRPERWLQKE--KKINPFAHLPFGIGKRMCIGRRLAELQLHLA 443
Query: 422 AAVLLQFF 429
++Q +
Sbjct: 444 LCWIIQKY 451
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 162/411 (39%), Gaps = 51/411 (12%)
Query: 71 GIF-AVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQD 129
G+F A G WR QR+ FS LR+ ++ + +T + + AA +
Sbjct: 96 GVFLARYGPAWREQRR-----FSVSTLRNLGLGK-KSLEQWVTEEAACLCAAFANHSGRP 149
Query: 130 VLLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKAFDDSNFIVYCRYVDVFWE------- 182
LD ++++ S G +F +DD F+ R +D+ E
Sbjct: 150 FRPNGLLDK--------AVSNVIASLTCGRRFE--YDDPRFL---RLLDLAQEGLKEESG 196
Query: 183 -LKRYLN-----IGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLE 236
L+ LN + + A + ++ +F+ +L E + + D+ FL E
Sbjct: 197 FLREVLNAVPVLLHIPALAGKVLRFQKAFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAE 256
Query: 237 SEK---DPES-MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREA 292
EK +PES D+ LR + + AG TT+ TL W ++ HP +Q + +E
Sbjct: 257 MEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQ---QEI 313
Query: 293 TEAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKV 352
+ G + E M Y A + E R VP+ + DI GF++
Sbjct: 314 DDVIGQVRRPEMGDQA------HMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRI 367
Query: 353 KKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWL-VNGVFRSESPYKFAAFQAGPRICPGK 411
KG + ++ + +W E F PE +L G F P F F AG R C G+
Sbjct: 368 PKGTTLITNLSSVLKDEAVW-EKPFRFHPEHFLDAQGHF--VKPEAFLPFSAGRRACLGE 424
Query: 412 EFAYRQMKILAAVLLQFFRFKLVDETKEATYRTMFTLHVDKGLH-LYAYPR 461
A ++ + LLQ F F + ++ +F V + L A PR
Sbjct: 425 PLARMELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAFLVSPSPYELCAVPR 475
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 109/269 (40%), Gaps = 18/269 (6%)
Query: 199 IKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEK---DPES-MTDKYLRDITL 254
++ +F+ +L E + + D+ FL E EK +PES D+ LR +
Sbjct: 219 LRFQKAFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVA 278
Query: 255 NFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALE 314
+ AG TT+ TL W ++ HP +Q + +E + G + E
Sbjct: 279 DLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQ---QEIDDVIGQVRRPEMGDQA------ 329
Query: 315 KMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGE 374
M Y A + E R VP+ + DI GF++ KG + ++ + +W E
Sbjct: 330 HMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVW-E 388
Query: 375 DAEEFRPERWL-VNGVFRSESPYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFFRFKL 433
F PE +L G F P F F AG R C G+ A ++ + LLQ F F +
Sbjct: 389 KPFRFHPEHFLDAQGHF--VKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSV 446
Query: 434 VDETKEATYRTMFTLHVDKGLH-LYAYPR 461
++ +F V + L A PR
Sbjct: 447 PTGQPRPSHHGVFAFLVSPSPYELCAVPR 475
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 145/329 (44%), Gaps = 33/329 (10%)
Query: 109 EKLTSKFSVAAAAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGS-DDFGNQFTKAFDD 167
++ + V A A I + LL S+ I + FG + ++L + D K +D
Sbjct: 145 QEFCERMRVQAGAPVTIQKEFSLLTCSI--ICYLTFGNKEDTLVHAFHDCVQDLMKTWDH 202
Query: 168 SNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKE 227
+ + +D+ L+ + N G+ LK+ I+ D + + +R +E M G+
Sbjct: 203 WSI----QILDMVPFLRFFPNPGL-WRLKQAIENRDHMVEKQLRRHKESMVA-----GQW 252
Query: 228 DILSRFLLES------EKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLI 281
++ ++L+ E+ P + + ++ ++ I G +TTA+TL+W L HP I
Sbjct: 253 RDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEI 312
Query: 282 QEKAALDV-REATEAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNA 340
Q + ++ RE G C+ VT ++ L+A ++E LRL P VP+ +
Sbjct: 313 QRRLQEELDREL--GPGASCSR-----VTYKDRARLPLLNATIAEVLRLRPVVPLALPHR 365
Query: 341 AEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAA 400
G+ + +G V +W E EFRP+R+L G S A
Sbjct: 366 TTRPSSIFGYDIPEGMVVIPNLQGAHLDETVW-EQPHEFRPDRFLEPGANPSA-----LA 419
Query: 401 FQAGPRICPGKEFAYRQMKILAAVLLQFF 429
F G R+C G+ A ++ ++ A LLQ F
Sbjct: 420 FGCGARVCLGESLARLELFVVLARLLQAF 448
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 165/373 (44%), Gaps = 25/373 (6%)
Query: 73 FAVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAK-QAIDMQDVL 131
FA G W+ R+LA F+ + +D + + +++++ + A Q+ID+ +
Sbjct: 96 FADSGAHWQLHRRLAMATFA--LFKDGDQKLEKIICQEISTLCDMLATHNGQSIDISFPV 153
Query: 132 LKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGM 191
+ + I + F + + + + D+ + VD+ LK + N +
Sbjct: 154 FVAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDN--LSKDSLVDLVPWLKIFPNKTL 211
Query: 192 EASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESE-------KDPESM 244
E LK ++K+ + + +++ +E+ ++ + D L + + S+ +D E +
Sbjct: 212 E-KLKSHVKIRNDLLNKILENYKEKFRSDSI-TNMLDTLMQAKMNSDNGNAGPDQDSELL 269
Query: 245 TDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEF 304
+D ++ + AG +TT + + W L +P +++K ++ + F
Sbjct: 270 SDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVG---------F 320
Query: 305 AKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYA 364
++ T + ++ L A + E LRL P P+ + A D F V KG V +A
Sbjct: 321 SRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWA 380
Query: 365 MGRMTYIWGEDAEEFRPERWLVNGVFRSESP-YKFAAFQAGPRICPGKEFAYRQMKILAA 423
+ W + ++F PER+L + SP + F AGPR C G+ A +++ ++ A
Sbjct: 381 LHHNEKEWHQ-PDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMA 439
Query: 424 VLLQFFRFKLVDE 436
LLQ F ++ D+
Sbjct: 440 WLLQRFDLEVPDD 452
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 100/252 (39%), Gaps = 15/252 (5%)
Query: 187 LNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEKDPESMTD 246
L G L RN ++ F+ LI K + +L + D + + + DP S
Sbjct: 212 LPFGKHQQLFRNAAVVYDFLSRLIE-KASVNRKPQLPQHFVDAYLDEMDQGKNDPSSTFS 270
Query: 247 KYLRDITLN-FIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFA 305
K ++ IIAG +TT N L W + +P IQ + ++ G D+
Sbjct: 271 KENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKC 330
Query: 306 KLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAM 365
K M Y A L E LR VP+ +A +D + G+ + KG V Y++
Sbjct: 331 K---------MPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSV 381
Query: 366 GRMTYIWGEDAEEFRPERWL-VNGVFRSESPYKFAAFQAGPRICPGKEFAYRQMKILAAV 424
W D E F PER+L +G F + F G R C G+ A +M +
Sbjct: 382 HFDEKYW-RDPEVFHPERFLDSSGYFAKKE--ALVPFSLGRRHCLGEHLARMEMFLFFTA 438
Query: 425 LLQFFRFKLVDE 436
LLQ F E
Sbjct: 439 LLQRFHLHFPHE 450
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 113/257 (43%), Gaps = 29/257 (11%)
Query: 176 YVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLL 235
+ + W K+Y ++++K + I LI KR ++ E D + +L
Sbjct: 234 FFKISWLYKKY---------EKSVKDLKDAIEVLIAEKRRRISTEEKLEECMDFATELIL 284
Query: 236 ESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEA 295
++ +T + + L +IA DT + +L + +++ KHP ++E +++
Sbjct: 285 AEKRG--DLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVI-G 341
Query: 296 QGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKG 355
+ ++ D+ KL +E Y E++R P V + + A EDD++ DG+ VKKG
Sbjct: 342 ERDIKIDDIQKL---KVMENFIY------ESMRYQPVVDLVMRKALEDDVI-DGYPVKKG 391
Query: 356 DGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFAY 415
+ M R+ + EF E + N +R P+ F GPR C GK A
Sbjct: 392 TNIILNIGRMHRLEFF--PKPNEFTLENFAKNVPYRYFQPFGF-----GPRGCAGKYIAM 444
Query: 416 RQMKILAAVLLQFFRFK 432
MK + LL+ F K
Sbjct: 445 VMMKAILVTLLRRFHVK 461
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 100/252 (39%), Gaps = 15/252 (5%)
Query: 187 LNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEKDPESMTD 246
L G L RN ++ F+ LI K + +L + D + + + DP S
Sbjct: 212 LPFGKHQQLFRNAAVVYDFLSRLIE-KASVNRKPQLPQHFVDAYLDEMDQGKNDPSSTFS 270
Query: 247 KYLRDITLN-FIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFA 305
K ++ IIAG +TT N L W + +P IQ + ++ G D+
Sbjct: 271 KENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKC 330
Query: 306 KLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAM 365
K M Y A L E LR VP+ +A +D + G+ + KG V Y++
Sbjct: 331 K---------MPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSV 381
Query: 366 GRMTYIWGEDAEEFRPERWL-VNGVFRSESPYKFAAFQAGPRICPGKEFAYRQMKILAAV 424
W D E F PER+L +G F + F G R C G+ A +M +
Sbjct: 382 HFDEKYW-RDPEVFHPERFLDSSGYFAKKE--ALVPFSLGRRHCLGEHLARMEMFLFFTA 438
Query: 425 LLQFFRFKLVDE 436
LLQ F E
Sbjct: 439 LLQRFHLHFPHE 450
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 102/433 (23%), Positives = 170/433 (39%), Gaps = 79/433 (18%)
Query: 51 FSNYGKGDYNWNLMRDLFGDGIFAVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEK 110
FS G + + + L GI + +G +W+ R+ FS LR+F K
Sbjct: 76 FSGRGNSPISQRITKGL---GIISSNGKRWKEIRR-----FSLTTLRNFGMG-------K 120
Query: 111 LTSKFSVAAAAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKAFD--DS 168
+ + V A ++ S D F +G N + F K FD D
Sbjct: 121 RSIEDRVQEEAHCLVEELRKTKASPCDPTFILGCA-PCNVICSV-----VFQKRFDYKDQ 174
Query: 169 NFIVYCRYVDVFWELKRYLN-----------------IGMEASLKRNIKLIDSFIFELIR 211
NF+ + F E R LN G + +N+ L S+I E ++
Sbjct: 175 NFLTLMKR---FNENFRILNSPWIQVCNNFPLLIDCFPGTHNKVLKNVALTRSYIREKVK 231
Query: 212 CKREQMKNVELDRGKEDILSRFLLESEKDPESMTDKY----LRDITLNFIIAGKDTTANT 267
E +++++ + D + FL++ E++ ++ ++ L + +AG +TT+ T
Sbjct: 232 ---EHQASLDVNNPR-DFIDCFLIKMEQEKDNQKSEFNIENLVGTVADLFVAGTETTSTT 287
Query: 268 LTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLHAALSETL 327
L + +L KHP + K ++ + C + + M Y A + E
Sbjct: 288 LRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQDRSH---------MPYTDAVVHEIQ 338
Query: 328 RLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAE-----EFRPE 382
R VP +A D + + KG T M +T + +D E F P
Sbjct: 339 RYSDLVPTGVPHAVTTDTKFRNYLIPKG------TTIMALLTSVLHDDKEFPNPNIFDPG 392
Query: 383 RWL-VNGVFRSESPYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETKEAT 441
+L NG F+ +S Y F F AG RIC G+ A ++ + +LQ F K VD+ K
Sbjct: 393 HFLDKNGNFK-KSDY-FMPFSAGKRICAGEGLARMELFLFLTTILQNFNLKSVDDLKN-- 448
Query: 442 YRTMFTLHVDKGL 454
+ T V KG+
Sbjct: 449 ---LNTTAVTKGI 458
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 114/257 (44%), Gaps = 25/257 (9%)
Query: 190 GMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEKDPESMTDKYL 249
G + +N+ + ++ E ++ + Q + R D L L+E EK+ S Y
Sbjct: 209 GSHRKVIKNVAEVKEYVSERVK-EHHQSLDPNCPRDLTDCL---LVEMEKEKHSAERLYT 264
Query: 250 RD-ITL---NFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFA 305
D IT+ + AG +TT+ TL + +L K+P I+EK ++ +
Sbjct: 265 MDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGP---------S 315
Query: 306 KLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAM 365
++ ++M Y+ A + E R VP + + A D + G+ + KG V +
Sbjct: 316 RIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVV---VPTL 372
Query: 366 GRMTYIWGE--DAEEFRPERWL-VNGVFRSESPYKFAAFQAGPRICPGKEFAYRQMKILA 422
+ Y E D E+F+PE +L NG F+ F F G R+C G+ A ++ +L
Sbjct: 373 DSVLYDNQEFPDPEKFKPEHFLNENGKFKYSD--YFKPFSTGKRVCAGEGLARMELFLLL 430
Query: 423 AVLLQFFRFKLVDETKE 439
+LQ F K + + K+
Sbjct: 431 CAILQHFNLKPLVDPKD 447
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 154/388 (39%), Gaps = 54/388 (13%)
Query: 69 GDGIFAVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQ 128
G GI +G KW+ R+ FS LR+F K + + V A+ ++
Sbjct: 90 GFGIVFSNGKKWKEIRR-----FSLMTLRNFGMG-------KRSIEDRVQEEARCLVEEL 137
Query: 129 DVLLKSSLDSIFKVGFGVELNSLSGSD-----DFGNQ----FTKAFDDSNFIVYCRYVDV 179
S D F +G N + D+ +Q + +++ I+ ++ V
Sbjct: 138 RKTKASPCDPTFILGCA-PCNVICSIIFHKRFDYKDQQFLNLMEKLNENIEILSSPWIQV 196
Query: 180 FWELKRYLNI--GMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
+ L+ G L +N+ + S+I E ++ +E M +D + FL++
Sbjct: 197 YNNFPALLDYFPGTHNKLLKNVAFMKSYILEKVKEHQESMDM----NNPQDFIDCFLMKM 252
Query: 238 EKD----PESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREAT 293
EK+ P T + L + ++ AG +TT+ TL + +L KHP + K ++
Sbjct: 253 EKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVI 312
Query: 294 EAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVK 353
+ C + + M Y A + E R +P +A DI + +
Sbjct: 313 GRNRSPCMQDRS---------HMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIP 363
Query: 354 KGDGVNYMTYAMGRMTYIWGE-----DAEEFRPERWLVNGVFRSESPYKFAAFQAGPRIC 408
KG T + +T + + + E F P +L G +S Y F F AG RIC
Sbjct: 364 KG------TTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKY-FMPFSAGKRIC 416
Query: 409 PGKEFAYRQMKILAAVLLQFFRFK-LVD 435
G+ A ++ + +LQ F K LVD
Sbjct: 417 VGEALAGMELFLFLTSILQNFNLKSLVD 444
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 107/256 (41%), Gaps = 30/256 (11%)
Query: 190 GMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEKD----PESMT 245
G L +N+ + S+I E ++ +E M +D + FL++ EK+ P T
Sbjct: 211 GTHNKLLKNVAFMKSYILEKVKEHQESMDM----NNPQDFIDCFLMKMEKEKHNQPSEFT 266
Query: 246 DKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFA 305
+ L + ++ AG +TT+ TL + +L KHP + K ++ + C + +
Sbjct: 267 IESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRS 326
Query: 306 KLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAM 365
M Y A + E R +P +A DI + + KG T +
Sbjct: 327 ---------HMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKG------TTIL 371
Query: 366 GRMTYIWGE-----DAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFAYRQMKI 420
+T + + + E F P +L G +S Y F F AG RIC G+ A ++ +
Sbjct: 372 ISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKY-FMPFSAGKRICVGEALAGMELFL 430
Query: 421 LAAVLLQFFRFK-LVD 435
+LQ F K LVD
Sbjct: 431 FLTSILQNFNLKSLVD 446
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 151/388 (38%), Gaps = 67/388 (17%)
Query: 69 GDGIFAVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAA----AAKQA 124
G G+ +G++WR R+ FS +RDF R+ E++ + +K A
Sbjct: 91 GYGVIFANGERWRALRR-----FSLATMRDFGMGK-RSVEERIQEEARCLVEELRKSKGA 144
Query: 125 IDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKAFDDSNFIVYCRYVD------ 178
+ + + LL S+ S ++ S FG +F D V+ R +D
Sbjct: 145 L-LDNTLLFHSITS-----------NIICSIVFGKRF-----DYKDPVFLRLLDLFFQSF 187
Query: 179 ---------VFWELKRYLNI--GMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKE 227
VF +L G + RN++ I++FI + + R +
Sbjct: 188 SLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLD----PSNPR 243
Query: 228 DILSRFLLESEKDPESMTDKY----LRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQE 283
D + +LL EKD + ++ L L+ AG +TT+ TL + F ++ K+P + E
Sbjct: 244 DFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTE 303
Query: 284 KAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAED 343
+ ++ + + D+ A KM Y A + E RL +P +
Sbjct: 304 RVQKEIEQVIGSHRPPALDDRA---------KMPYTDAVIHEIQRLGDLIPFGVPHTVTK 354
Query: 344 DILPDGFKVKKGDGV-NYMTYAMGRMTYIWGEDAEEFRPERWL-VNGVFRSESPYKFAAF 401
D G+ + K V ++ A+ Y E F P +L NG + F F
Sbjct: 355 DTQFRGYVIPKNTEVFPVLSSALHDPRYF--ETPNTFNPGHFLDANGALKRNE--GFMPF 410
Query: 402 QAGPRICPGKEFAYRQMKILAAVLLQFF 429
G RIC G+ A ++ + +LQ F
Sbjct: 411 SLGKRICAGEGIARTELFLFFTTILQNF 438
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 151/388 (38%), Gaps = 67/388 (17%)
Query: 69 GDGIFAVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAA----AAKQA 124
G G+ +G++WR R+ FS +RDF R+ E++ + +K A
Sbjct: 91 GYGVIFANGERWRALRR-----FSLATMRDFGMGK-RSVEERIQEEARCLVEELRKSKGA 144
Query: 125 IDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKAFDDSNFIVYCRYVD------ 178
+ + + LL S+ S ++ S FG +F D V+ R +D
Sbjct: 145 L-LDNTLLFHSITS-----------NIICSIVFGKRF-----DYKDPVFLRLLDLFFQSF 187
Query: 179 ---------VFWELKRYLN--IGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKE 227
VF +L G + RN++ I++FI + + R +
Sbjct: 188 SLISSFSSQVFELFSGFLKHFPGTHRQIYRNLQEINTFIGQSVEKHRATLD----PSNPR 243
Query: 228 DILSRFLLESEKDPESMTDKY----LRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQE 283
D + +LL EKD + ++ L L+ AG +TT+ TL + F ++ K+P + E
Sbjct: 244 DFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTE 303
Query: 284 KAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAED 343
+ ++ + + D+ A KM Y A + E RL +P +
Sbjct: 304 RVQKEIEQVIGSHRPPALDDRA---------KMPYTDAVIHEIQRLGDLIPFGVPHTVTK 354
Query: 344 DILPDGFKVKKGDGV-NYMTYAMGRMTYIWGEDAEEFRPERWL-VNGVFRSESPYKFAAF 401
D G+ + K V ++ A+ Y E F P +L NG + F F
Sbjct: 355 DTQFRGYVIPKNTEVFPVLSSALHDPRYF--ETPNTFNPGHFLDANGALKRNE--GFMPF 410
Query: 402 QAGPRICPGKEFAYRQMKILAAVLLQFF 429
G RIC G+ A ++ + +LQ F
Sbjct: 411 SLGKRICLGEGIARTELFLFFTTILQNF 438
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 151/388 (38%), Gaps = 67/388 (17%)
Query: 69 GDGIFAVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAA----AAKQA 124
G G+ +G++WR R+ FS +RDF R+ E++ + +K A
Sbjct: 91 GYGVIFANGERWRALRR-----FSLATMRDFGMGK-RSVEERIQEEARCLVEELRKSKGA 144
Query: 125 IDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKAFDDSNFIVYCRYVD------ 178
+ + + LL S+ S ++ S FG +F D V+ R +D
Sbjct: 145 L-LDNTLLFHSITS-----------NIICSIVFGKRF-----DYKDPVFLRLLDLFFQSF 187
Query: 179 ---------VFWELKRYLNI--GMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKE 227
VF +L G + RN++ I++FI + + R +
Sbjct: 188 SLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLD----PSNPR 243
Query: 228 DILSRFLLESEKDPESMTDKY----LRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQE 283
D + +LL EKD + ++ L L+ AG +TT+ TL + F ++ K+P + E
Sbjct: 244 DFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTE 303
Query: 284 KAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAED 343
+ ++ + + D+ A KM Y A + E RL +P +
Sbjct: 304 RVQKEIEQVIGSHRPPALDDRA---------KMPYTDAVIHEIQRLGDLIPFGVPHTVTK 354
Query: 344 DILPDGFKVKKGDGV-NYMTYAMGRMTYIWGEDAEEFRPERWL-VNGVFRSESPYKFAAF 401
D G+ + K V ++ A+ Y E F P +L NG + F F
Sbjct: 355 DTQFRGYVIPKNTEVFPVLSSALHDPRYF--ETPNTFNPGHFLDANGALKRNE--GFMPF 410
Query: 402 QAGPRICPGKEFAYRQMKILAAVLLQFF 429
G RIC G+ A ++ + +LQ F
Sbjct: 411 SLGKRICLGEGIARTELFLFFTTILQNF 438
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 151/388 (38%), Gaps = 67/388 (17%)
Query: 69 GDGIFAVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAA----AAKQA 124
G G+ +G++WR R+ FS +RDF R+ E++ + +K A
Sbjct: 91 GYGVIFANGERWRALRR-----FSLATMRDFGMGK-RSVEERIQEEARCLVEELRKSKGA 144
Query: 125 IDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKAFDDSNFIVYCRYVD------ 178
+ + + LL S+ S ++ S FG +F D V+ R +D
Sbjct: 145 L-LDNTLLFHSITS-----------NIICSIVFGKRF-----DYKDPVFLRLLDLFFQSF 187
Query: 179 ---------VFWELKRYLNI--GMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKE 227
VF +L G + RN++ I++FI + + R +
Sbjct: 188 SLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLD----PSNPR 243
Query: 228 DILSRFLLESEKDPESMTDKY----LRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQE 283
D + +LL EKD + ++ L L+ AG +TT+ TL + F ++ K+P + E
Sbjct: 244 DFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTE 303
Query: 284 KAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAED 343
+ ++ + + D+ A KM Y A + E RL +P +
Sbjct: 304 RVQKEIEQVIGSHRPPALDDRA---------KMPYTDAVIHEIQRLGDLIPFGVPHTVTK 354
Query: 344 DILPDGFKVKKGDGV-NYMTYAMGRMTYIWGEDAEEFRPERWL-VNGVFRSESPYKFAAF 401
D G+ + K V ++ A+ Y E F P +L NG + F F
Sbjct: 355 DTQFRGYVIPKNTEVFPVLSSALHDPRYF--ETPNTFNPGHFLDANGALKRNE--GFMPF 410
Query: 402 QAGPRICPGKEFAYRQMKILAAVLLQFF 429
G RIC G+ A ++ + +LQ F
Sbjct: 411 SLGKRICLGEGIARTELFLFFTTILQNF 438
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 150/350 (42%), Gaps = 33/350 (9%)
Query: 71 GIFAVDGDKWRHQR-KLASYEFSTKILRDF---SSAVFRANAEKLTSKFSVAAAAKQAID 126
G+F ++G +WR R +L S K ++ F AV R ++ L K A +D
Sbjct: 102 GVFLLNGPEWRFNRLRLNPDVLSPKAVQRFLPMVDAVARDFSQALKKKVLQNARGSLTLD 161
Query: 127 MQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGN-QFTKAFDDSNFIVYCRYVDVFWELKR 185
+Q + ++++ FG L + S + F A + +++ V + + + R
Sbjct: 162 VQPSIFHYTIEASNLALFGERLGLVGHSPSSASLNFLHALE----VMFKSTVQLMF-MPR 216
Query: 186 YLNIGMEASL-KRNIKLIDSFIFELIRCKREQMKNVELDRGKE--DILSRFLLESEKDPE 242
L+ + + K + + D C ++ + + +R + I++ LL++E E
Sbjct: 217 SLSRWISPKVWKEHFEAWDCIFQYGDNCIQKIYQELAFNRPQHYTGIVAELLLKAELSLE 276
Query: 243 SMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCAD 302
++ ++ DTTA L + L ++P +Q+ +R+ + A ++
Sbjct: 277 AIKAN-----SMELTAGSVDTTAFPLLMTLFELARNPDVQQ----ILRQESLAAAASISE 327
Query: 303 EFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMT 362
K TE L L AAL ETLRLYP V + + D++ + + G V
Sbjct: 328 HPQKATTELPL-----LRAALKETLRLYP-VGLFLERVVSSDLVLQNYHIPAGTLVQVFL 381
Query: 363 YAMGRMTYIWGEDAEEFRPERWL-VNGVFRSESPYKFAAFQAGPRICPGK 411
Y++GR ++ E + P+RWL + G R+ + F G R C G+
Sbjct: 382 YSLGRNAALFPR-PERYNPQRWLDIRGSGRN---FHHVPFGFGMRQCLGR 427
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 151/388 (38%), Gaps = 67/388 (17%)
Query: 69 GDGIFAVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAA----AAKQA 124
G G+ +G++WR R+ FS +RDF R+ E++ + +K A
Sbjct: 91 GYGVIFANGERWRALRR-----FSLATMRDFGMGK-RSVEERIQEEARCLVEELRKSKGA 144
Query: 125 IDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKAFDDSNFIVYCRYVD------ 178
+ + + LL S+ S ++ S FG +F D V+ R +D
Sbjct: 145 L-LDNTLLFHSITS-----------NIICSIVFGKRF-----DYKDPVFLRLLDLFFQSF 187
Query: 179 ---------VFWELKRYLNI--GMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKE 227
VF +L G + RN++ I++FI + + R +
Sbjct: 188 SLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLD----PSNPR 243
Query: 228 DILSRFLLESEKDPESMTDKY----LRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQE 283
D + +LL EKD + ++ L L+ AG +TT+ TL + F ++ K+P + E
Sbjct: 244 DFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTE 303
Query: 284 KAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAED 343
+ ++ + + D+ A KM Y A + E RL +P +
Sbjct: 304 RVQKEIEQVIGSHRPPALDDRA---------KMPYTDAVIHEIQRLGDLIPFGVPHTVTK 354
Query: 344 DILPDGFKVKKGDGV-NYMTYAMGRMTYIWGEDAEEFRPERWL-VNGVFRSESPYKFAAF 401
D G+ + K V ++ A+ Y E F P +L NG + F F
Sbjct: 355 DTQFRGYVIPKNTEVFPVLSSALHDPRYF--ETPNTFNPGHFLDANGALKRNE--GFMPF 410
Query: 402 QAGPRICPGKEFAYRQMKILAAVLLQFF 429
G RIC G+ A ++ + +LQ F
Sbjct: 411 SLGKRICLGEGIARTELFLFFTTILQNF 438
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 159/396 (40%), Gaps = 47/396 (11%)
Query: 67 LFGDG---IFAVD-GDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAK 122
L DG F+ D G W +R+LA +T FS A A++ + V+ AK
Sbjct: 92 LITDGQSLTFSTDSGPVWAARRRLAQNALNT-----FSIASDPASSSSCYLEEHVSKEAK 146
Query: 123 QAID-MQDVLL-KSSLDSIFKVGFGVELNSLSGSDDFGNQFTKAFDDSNFIVYCRYVDV- 179
I +Q+++ D +V V + ++ G+ FG F ++ D+ +V + V
Sbjct: 147 ALISRLQELMAGPGHFDPYNQVV--VSVANVIGAMCFGQHFPESSDEMLSLVKNTHEFVE 204
Query: 180 ---------FWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDIL 230
F+ + RYL +L+R F++ L + +E ++ + + + DI
Sbjct: 205 TASSGNPLDFFPILRYLP---NPALQRFKAFNQRFLWFLQKTVQEHYQDFDKNSVR-DIT 260
Query: 231 SRFLLESEKDPESMTDKYLRDITLNFII----AGKDTTANTLTWFFYMLCKHPLIQEKAA 286
S+K P + + ++ +N + AG DT ++W L P IQ K
Sbjct: 261 GALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQ 320
Query: 287 --LDVREATEAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDD 344
LD E + L + ++ YL A + ET R +P ++ D
Sbjct: 321 KELDTVIGRERRPRL-----------SDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRD 369
Query: 345 ILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPY--KFAAFQ 402
+GF + K V + + +W ED EFRPER+L P K F
Sbjct: 370 TTLNGFYIPKKCCVFVNQWQVNHDPELW-EDPSEFRPERFLTADGTAINKPLSEKMMLFG 428
Query: 403 AGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETK 438
G R C G+ A ++ + A+LLQ F + K
Sbjct: 429 MGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVK 464
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 158/381 (41%), Gaps = 49/381 (12%)
Query: 71 GIFAVDGDKWRHQRKLASYEF----STKILRDFSSAVFRANAEKLTSKFSVAAAAKQAID 126
G+ W+ R + E +TK AV R L + A + + D
Sbjct: 95 GVLLKKSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGD 154
Query: 127 MQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKAFDDSNFIVYCRYVDVFWELKRY 186
+ D L + + +SI V FG L ++ N + F D+ + ++ V +
Sbjct: 155 ISDDLFRFAFESITNVIFGERQGML---EEVVNPEAQRFIDAIYQMFHTSVPMLNLPPDL 211
Query: 187 LNIGMEASLKRNIKLID-----------SFIFELIRCKREQMKNVELD-RGKEDILSRFL 234
+ + K ++ D +F +EL Q +V D RG IL R L
Sbjct: 212 FRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWEL-----RQKGSVHHDYRG---ILYRLL 263
Query: 235 LESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREAT- 293
+S+ M+ + ++ + G DTT+ TL W Y + ++ +Q+ +V A
Sbjct: 264 GDSK-----MSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARH 318
Query: 294 EAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVK 353
+AQG++ L+ + L A++ ETLRL+P + V + +D++ + +
Sbjct: 319 QAQGDMA----------TMLQLVPLLKASIKETLRLHP-ISVTLQRYLVNDLVLRDYMIP 367
Query: 354 KGDGVNYMTYAMGR-MTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKE 412
V YA+GR T+ + D E F P RWL ++ + ++ F G R C G+
Sbjct: 368 AKTLVQVAIYALGREPTFFF--DPENFDPTRWLSKD--KNITYFRNLGFGWGVRQCLGRR 423
Query: 413 FAYRQMKILAAVLLQFFRFKL 433
A +M I +L+ FR ++
Sbjct: 424 IAELEMTIFLINMLENFRVEI 444
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 158/381 (41%), Gaps = 49/381 (12%)
Query: 71 GIFAVDGDKWRHQRKLASYEF----STKILRDFSSAVFRANAEKLTSKFSVAAAAKQAID 126
G+ W+ R + E +TK AV R L + A + + D
Sbjct: 98 GVLLKKSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGD 157
Query: 127 MQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKAFDDSNFIVYCRYVDVFWELKRY 186
+ D L + + +SI V FG L ++ N + F D+ + ++ V +
Sbjct: 158 ISDDLFRFAFESITNVIFGERQGML---EEVVNPEAQRFIDAIYQMFHTSVPMLNLPPDL 214
Query: 187 LNIGMEASLKRNIKLID-----------SFIFELIRCKREQMKNVELD-RGKEDILSRFL 234
+ + K ++ D +F +EL Q +V D RG IL R L
Sbjct: 215 FRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWEL-----RQKGSVHHDYRG---ILYRLL 266
Query: 235 LESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREAT- 293
+S+ M+ + ++ + G DTT+ TL W Y + ++ +Q+ +V A
Sbjct: 267 GDSK-----MSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARH 321
Query: 294 EAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVK 353
+AQG++ L+ + L A++ ETLRL+P + V + +D++ + +
Sbjct: 322 QAQGDMA----------TMLQLVPLLKASIKETLRLHP-ISVTLQRYLVNDLVLRDYMIP 370
Query: 354 KGDGVNYMTYAMGR-MTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKE 412
V YA+GR T+ + D E F P RWL ++ + ++ F G R C G+
Sbjct: 371 AKTLVQVAIYALGREPTFFF--DPENFDPTRWLSKD--KNITYFRNLGFGWGVRQCLGRR 426
Query: 413 FAYRQMKILAAVLLQFFRFKL 433
A +M I +L+ FR ++
Sbjct: 427 IAELEMTIFLINMLENFRVEI 447
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 21/219 (9%)
Query: 228 DILSRFLL---ESEKDPESMTDKYLRDI---TLNFIIAGKDTTANTLTWFFYMLCKHPLI 281
D + FL+ E EK+P T+ YL+++ TLN I G +T + TL + F +L KHP +
Sbjct: 244 DFIDSFLIRMQEEEKNPN--TEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEV 301
Query: 282 QEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAA 341
+ K ++ + + K A KM Y+ A + E R +P+
Sbjct: 302 EAKVHEEIDRV------IGKNRQPKFEDRA---KMPYMEAVIHEIQRFGDVIPMSLARRV 352
Query: 342 EDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWL-VNGVFRSESPYKFAA 400
+ D F + KG V M ++ R + + ++F P+ +L G F+ F
Sbjct: 353 KKDTKFRDFFLPKGTEVYPMLGSVLRDPSFF-SNPQDFNPQHFLNEKGQFKKSD--AFVP 409
Query: 401 FQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETKE 439
F G R C G+ A ++ + ++Q FR K K+
Sbjct: 410 FSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKD 448
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 21/219 (9%)
Query: 228 DILSRFLL---ESEKDPESMTDKYLRDI---TLNFIIAGKDTTANTLTWFFYMLCKHPLI 281
D + FL+ E EK+P T+ YL+++ TLN AG +T + TL + F +L KHP +
Sbjct: 244 DFIDSFLIRMQEEEKNPN--TEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEV 301
Query: 282 QEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAA 341
+ K ++ + + K A KM Y+ A + E R +P+
Sbjct: 302 EAKVHEEIDRV------IGKNRQPKFEDRA---KMPYMEAVIHEIQRFGDVIPMGLARRV 352
Query: 342 EDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWL-VNGVFRSESPYKFAA 400
+ D F + KG V M ++ R + + ++F P+ +L G F+ F
Sbjct: 353 KKDTKFRDFFLPKGTEVYPMLGSVLRDPSFF-SNPQDFNPQHFLNEKGQFKKSD--AFVP 409
Query: 401 FQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETKE 439
F G R C G+ A ++ + ++Q FR K K+
Sbjct: 410 FSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKD 448
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 21/219 (9%)
Query: 228 DILSRFLL---ESEKDPESMTDKYLRDI---TLNFIIAGKDTTANTLTWFFYMLCKHPLI 281
D + FL+ E EK+P T+ YL+++ TLN AG +T + TL + F +L KHP +
Sbjct: 244 DFIDSFLIRMQEEEKNPN--TEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEV 301
Query: 282 QEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAA 341
+ K ++ + + K A KM Y A + E R +P+ +
Sbjct: 302 EAKVHEEIDRV------IGKNRQPKFEDRA---KMPYTEAVIHEIQRFGDMLPMGLAHRV 352
Query: 342 EDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWL-VNGVFRSESPYKFAA 400
D F + KG V M ++ R + + +F P+ +L G F+ F
Sbjct: 353 NKDTKFRDFFLPKGTEVFPMLGSVLRDPRFF-SNPRDFNPQHFLDKKGQFKKSD--AFVP 409
Query: 401 FQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETKE 439
F G R C G+ A ++ + ++Q FRFK K+
Sbjct: 410 FSIGKRYCFGEGLARMELFLFFTTIMQNFRFKSPQSPKD 448
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 95/219 (43%), Gaps = 21/219 (9%)
Query: 228 DILSRFLL---ESEKDPESMTDKYLRDI---TLNFIIAGKDTTANTLTWFFYMLCKHPLI 281
D + FL+ E EK+P T+ YL+++ TL I G +T + TL + F +L KHP +
Sbjct: 244 DFIDSFLIRMQEEEKNPN--TEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEV 301
Query: 282 QEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAA 341
+ K ++ + + K A KM Y+ A + E R +P+
Sbjct: 302 EAKVHEEIDRV------IGKNRQPKFEDRA---KMPYMEAVIHEIQRFGDVIPMSLARRV 352
Query: 342 EDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWL-VNGVFRSESPYKFAA 400
+ D F + KG V M ++ R + + ++F P+ +L G F+ F
Sbjct: 353 KKDTKFRDFFLPKGTEVYPMLGSVLRDPSFF-SNPQDFNPQHFLNEKGQFKKSD--AFVP 409
Query: 401 FQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETKE 439
F G R C G+ A ++ + ++Q FR K K+
Sbjct: 410 FSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKD 448
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 95/219 (43%), Gaps = 21/219 (9%)
Query: 228 DILSRFLL---ESEKDPESMTDKYLRDI---TLNFIIAGKDTTANTLTWFFYMLCKHPLI 281
D + FL+ E EK+P T+ YL+++ TL I G +T + TL + F +L KHP +
Sbjct: 244 DFIDSFLIRMQEEEKNPN--TEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEV 301
Query: 282 QEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAA 341
+ K ++ + + K A KM Y+ A + E R +P+
Sbjct: 302 EAKVHEEIDRV------IGKNRQPKFEDRA---KMPYMEAVIHEIQRFGDVIPMSLARRV 352
Query: 342 EDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWL-VNGVFRSESPYKFAA 400
+ D F + KG V M ++ R + + ++F P+ +L G F+ F
Sbjct: 353 KKDTKFRDFFLPKGTEVYPMLGSVLRDPSFF-SNPQDFNPQHFLNEKGQFKKSD--AFVP 409
Query: 401 FQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETKE 439
F G R C G+ A ++ + ++Q FR K K+
Sbjct: 410 FSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKD 448
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 21/219 (9%)
Query: 228 DILSRFLL---ESEKDPESMTDKYLRDI---TLNFIIAGKDTTANTLTWFFYMLCKHPLI 281
D + FL+ E EK+P T+ YL+++ TL + G +T + TL + F +L KHP +
Sbjct: 244 DFIDSFLIRMQEEEKNPN--TEFYLKNLVMTTLQLFVGGTETVSTTLRYGFLLLMKHPEV 301
Query: 282 QEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAA 341
+ K ++ + + K A KM Y+ A + E R +P+
Sbjct: 302 EAKVHEEIDRV------IGKNRQPKFEDRA---KMPYMEAVIHEIQRFGDVIPMSLARRV 352
Query: 342 EDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWL-VNGVFRSESPYKFAA 400
+ D F + KG V M ++ R + + ++F P+ +L G F+ F
Sbjct: 353 KKDTKFRDFFLPKGTEVYPMLGSVLRDPSFF-SNPQDFNPQHFLNEKGQFKKSD--AFVP 409
Query: 401 FQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETKE 439
F G R C G+ A ++ + ++Q FR K K+
Sbjct: 410 FSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKD 448
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/373 (20%), Positives = 150/373 (40%), Gaps = 37/373 (9%)
Query: 69 GDGIFAVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAA----AAKQA 124
G G+ +G++W+ R+ FS +RDF R+ E++ + +K A
Sbjct: 91 GYGVIFANGNRWKVLRR-----FSVTTMRDFGMGK-RSVEERIQEEAQCLIEELRKSKGA 144
Query: 125 IDMQDVLLKS-SLDSIFKVGFGVELNSLSGSDDFGNQFTKAFDDSNFI--VYCRYVDVFW 181
+ L +S + + I + FG + +F + + I V+ + ++F
Sbjct: 145 LMDPTFLFQSITANIICSIVFGKRFHY--QDQEFLKMLNLFYQTFSLISSVFGQLFELFS 202
Query: 182 ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEKDP 241
++ G + +N++ I+++I + RE + D++ +LL EK+
Sbjct: 203 GFLKHFP-GAHRQVYKNLQEINAYIGHSVEKHRETLD----PSAPRDLIDTYLLHMEKEK 257
Query: 242 ESMTDKY----LRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQG 297
+ ++ L TL+ AG +TT+ TL + F ++ K+P + E+ RE + G
Sbjct: 258 SNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERV---YREIEQVIG 314
Query: 298 NLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDG 357
E KM Y A + E R +P+ + G+ + K
Sbjct: 315 PHRPPELHDRA------KMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTE 368
Query: 358 VNYMTYAMGRMTYIWGEDAEEFRPERWL-VNGVFRSESPYKFAAFQAGPRICPGKEFAYR 416
V ++ + + E + F P+ +L NG + F F G RIC G+ A
Sbjct: 369 V-FLILSTALHDPHYFEKPDAFNPDHFLDANGALKKTE--AFIPFSLGKRICLGEGIARA 425
Query: 417 QMKILAAVLLQFF 429
++ + +LQ F
Sbjct: 426 ELFLFFTTILQNF 438
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 106/259 (40%), Gaps = 29/259 (11%)
Query: 190 GMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEKDPESMTDKY- 248
G L +N+ ++S I E ++ +E M D + FL++ EK+ ++ ++
Sbjct: 211 GTHNKLLKNLAFMESDILEKVKEHQESMD----INNPRDFIDCFLIKMEKEKQNQQSEFT 266
Query: 249 ---LRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFA 305
L + + AG +TT+ TL + +L KHP + K ++ + C +
Sbjct: 267 IENLVITAADLLGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQDRG 326
Query: 306 KLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAM 365
M Y A + E R +P +A D+ + + KG T +
Sbjct: 327 H---------MPYTDAVVHEVQRYIDLIPTSLPHAVTCDVKFRNYLIPKG------TTIL 371
Query: 366 GRMTYIWGED-----AEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFAYRQMKI 420
+T + ++ E F P +L G +S Y F F AG RIC G+ A ++ +
Sbjct: 372 TSLTSVLHDNKEFPNPEMFDPRHFLDEGGNFKKSNY-FMPFSAGKRICVGEGLARMELFL 430
Query: 421 LAAVLLQFFRFKLVDETKE 439
+LQ F K + + K+
Sbjct: 431 FLTFILQNFNLKSLIDPKD 449
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 25/204 (12%)
Query: 234 LLESEKDPESMTDKYLRDITLNF---IIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVR 290
LL+SEK L D+ N + G +TT+ TL W Y + + +QE +V
Sbjct: 266 LLKSEK-------MLLEDVKANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEVL 318
Query: 291 EA-TEAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDG 349
A +A+G++ L+ + L A++ ETLRL+P + V + E D++
Sbjct: 319 NARRQAEGDIS----------KMLQMVPLLKASIKETLRLHP-ISVTLQRYPESDLVLQD 367
Query: 350 FKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICP 409
+ + V YAMGR + ++F P RWL + ++ F G R C
Sbjct: 368 YLIPAKTLVQVAIYAMGRDPAFFS-SPDKFDPTRWLSKD--KDLIHFRNLGFGWGVRQCV 424
Query: 410 GKEFAYRQMKILAAVLLQFFRFKL 433
G+ A +M + +L+ F+ ++
Sbjct: 425 GRRIAELEMTLFLIHILENFKVEM 448
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 81/191 (42%), Gaps = 11/191 (5%)
Query: 244 MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADE 303
++D+ + +I L+ AG DT ++W L +P +Q K ++E E +
Sbjct: 275 LSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRK----IQE--ELDTVIGRSR 328
Query: 304 FAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTY 363
+L + L Y+ A + ET R VP ++ D GF + KG V +
Sbjct: 329 RPRLSDRSHLP---YMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQW 385
Query: 364 AMGRMTYIWGEDAEEFRPERWLV-NGVFRSESPYKFAAFQAGPRICPGKEFAYRQMKILA 422
+ +W + EF PER+L +G K F G R C G+ A ++ +
Sbjct: 386 QINHDQKLW-VNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFL 444
Query: 423 AVLLQFFRFKL 433
A+LLQ F +
Sbjct: 445 AILLQRVEFSV 455
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 96/444 (21%), Positives = 173/444 (38%), Gaps = 68/444 (15%)
Query: 34 EIFTTDPVNIEHILKTNFSNYGK---GDYNWNLMRDLFGDGIFAVDGDKWRHQRKLASYE 90
E F TDP+ + ++ + G L+ + F GD Q K +Y
Sbjct: 20 EEFRTDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAK--AYP 77
Query: 91 FSTKILRDFSSAVFRANAEKLTSKFSVAA-----AAKQAIDMQDVLLKSSLD-----SIF 140
F T I + VF A+ E+ AA A ++D + + D I
Sbjct: 78 FMTPIFGE--GVVFDASPERRKEMLHNAALRGEQMKGHAATIEDQVRRMIADWGEAGEID 135
Query: 141 KVGFGVELNSLSGSDDF-GNQFTKAFDDSNFIVYCRYVDVFWELKR----------YLNI 189
+ F EL + S G +F D R+ ++ EL+R YL I
Sbjct: 136 LLDFFAELTIYTSSATLIGKKFRDQLD-------GRFAKLYHELERGTDPLAYVDPYLPI 188
Query: 190 GMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFL-LESEKDPESMTDKY 248
S +R + + + + ++ N D+ D+L + +++E +
Sbjct: 189 ---ESFRRRDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAETGTPRFSADE 245
Query: 249 LRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLV 308
+ + ++ + AG T++ T +W L +H ++ A + E E G+ + V
Sbjct: 246 ITGMFISMMFAGHHTSSGTASWTLIELMRH---RDAYAAVIDELDELYGD------GRSV 296
Query: 309 TEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRM 368
+ AL ++ L L ETLRL+P + + + A+ + G ++ +GD V R+
Sbjct: 297 SFHALRQIPQLENVLKETLRLHPPLIILMR-VAKGEFEVQGHRIHEGDLVAASPAISNRI 355
Query: 369 TYIWGEDAEEFRPERWLVNGVFRSESP--------YKFAAFQAGPRICPGKEFAYRQMKI 420
+ D +F P R+ E P + + F AG C G FA Q+K
Sbjct: 356 PEDF-PDPHDFVPARY--------EQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKA 406
Query: 421 LAAVLLQFFRFKLVDETKEATYRT 444
+ +VLL+ + F++ + +YR
Sbjct: 407 IFSVLLREYEFEMAQPPE--SYRN 428
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 96/444 (21%), Positives = 174/444 (39%), Gaps = 68/444 (15%)
Query: 34 EIFTTDPVNIEHILKTNFSNYGK---GDYNWNLMRDLFGDGIFAVDGDKWRHQRKLASYE 90
E F TDP+ + ++ + G L+ + F GD Q K +Y
Sbjct: 20 EEFRTDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAK--AYP 77
Query: 91 FSTKILRDFSSAVFRANAEKLTSKFSVAA-----AAKQAIDMQDVLLKSSLD-----SIF 140
F T I + + VF A+ E+ AA A ++D + + D I
Sbjct: 78 FMTPIFGE--AVVFDASPERRKEMLHNAALRGEQMKGHAATIEDQVRRMIADWGEAGEID 135
Query: 141 KVGFGVELNSLSGSDDF-GNQFTKAFDDSNFIVYCRYVDVFWELKR----------YLNI 189
+ F EL + S G +F D R+ ++ EL+R YL I
Sbjct: 136 LLDFFAELTIYTSSACLIGKKFRDQLD-------GRFAKLYHELERGTDPLAYVDPYLPI 188
Query: 190 GMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFL-LESEKDPESMTDKY 248
S +R + + + + ++ N D+ D+L + +++E +
Sbjct: 189 ---ESFRRRDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAETGTPRFSADE 245
Query: 249 LRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLV 308
+ + ++ + AG T++ T +W L +H ++ A + E E G+ + V
Sbjct: 246 ITGMFISMMFAGHHTSSGTASWTLIELMRH---RDAYAAVIDELDELYGD------GRSV 296
Query: 309 TEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRM 368
+ AL ++ L L ETLRL+P + + + A+ + G ++ +GD V R+
Sbjct: 297 SFHALRQIPQLENVLKETLRLHPPLIILMR-VAKGEFEVQGHRIHEGDLVAASPAISNRI 355
Query: 369 TYIWGEDAEEFRPERWLVNGVFRSESP--------YKFAAFQAGPRICPGKEFAYRQMKI 420
+ D +F P R+ E P + + F AG C G FA Q+K
Sbjct: 356 PEDF-PDPHDFVPARY--------EQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKA 406
Query: 421 LAAVLLQFFRFKLVDETKEATYRT 444
+ +VLL+ + F++ + +YR
Sbjct: 407 IFSVLLREYEFEMAQPPE--SYRN 428
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 96/444 (21%), Positives = 173/444 (38%), Gaps = 68/444 (15%)
Query: 34 EIFTTDPVNIEHILKTNFSNYGK---GDYNWNLMRDLFGDGIFAVDGDKWRHQRKLASYE 90
E F TDP+ + ++ + G L+ + F GD Q K +Y
Sbjct: 20 EEFRTDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAK--AYP 77
Query: 91 FSTKILRDFSSAVFRANAEKLTSKFSVAA-----AAKQAIDMQDVLLKSSLD-----SIF 140
F T I + VF A+ E+ AA A ++D + + D I
Sbjct: 78 FMTPIFGE--GVVFDASPERRKEMLHNAALRGEQMKGHAATIEDQVRRMIADWGEAGEID 135
Query: 141 KVGFGVELNSLSGSDDF-GNQFTKAFDDSNFIVYCRYVDVFWELKR----------YLNI 189
+ F EL + S G +F D R+ ++ EL+R YL I
Sbjct: 136 LLDFFAELTIYTSSACLIGKKFRDQLD-------GRFAKLYHELERGTDPLAYVDPYLPI 188
Query: 190 GMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFL-LESEKDPESMTDKY 248
S +R + + + + ++ N D+ D+L + +++E +
Sbjct: 189 ---ESFRRRDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAETGTPRFSADE 245
Query: 249 LRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLV 308
+ + ++ + AG T++ T +W L +H ++ A + E E G+ + V
Sbjct: 246 ITGMFISMMFAGHHTSSGTASWTLIELMRH---RDAYAAVIDELDELYGD------GRSV 296
Query: 309 TEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRM 368
+ AL ++ L L ETLRL+P + + + A+ + G ++ +GD V R+
Sbjct: 297 SFHALRQIPQLENVLKETLRLHPPLIILMR-VAKGEFEVQGHRIHEGDLVAASPAISNRI 355
Query: 369 TYIWGEDAEEFRPERWLVNGVFRSESP--------YKFAAFQAGPRICPGKEFAYRQMKI 420
+ D +F P R+ E P + + F AG C G FA Q+K
Sbjct: 356 PEDF-PDPHDFVPARY--------EQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKA 406
Query: 421 LAAVLLQFFRFKLVDETKEATYRT 444
+ +VLL+ + F++ + +YR
Sbjct: 407 IFSVLLREYEFEMAQPPE--SYRN 428
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 121/281 (43%), Gaps = 27/281 (9%)
Query: 175 RYVDVFWELKR----------YLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDR 224
R+ ++ EL+R YL I S +R + + + + ++ N D+
Sbjct: 164 RFAKLYHELERGTDPLAYVDPYLPI---ESFRRRDEARNGLVALVADIMNGRIANPPTDK 220
Query: 225 GKEDILSRFL-LESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQE 283
D+L + +++E + + + ++ + AG T++ T +W L +H ++
Sbjct: 221 SDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRH---RD 277
Query: 284 KAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAED 343
A + E E G+ + V+ AL ++ L L ETLRL+P + + + A+
Sbjct: 278 AYAAVIDELDELYGD------GRSVSFHALRQIPQLENVLKETLRLHPPLIILMR-VAKG 330
Query: 344 DILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQA 403
+ G ++ +GD V R+ + D +F P R+ + + + F A
Sbjct: 331 EFEVQGHRIHEGDLVAASPAISNRIPEDF-PDPHDFVPARYEQPRQEDLLNRWTWIPFGA 389
Query: 404 GPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETKEATYRT 444
G C G FA Q+K + +VLL+ + F++ + +YR
Sbjct: 390 GRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPE--SYRN 428
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 111/257 (43%), Gaps = 28/257 (10%)
Query: 190 GMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEKDPE-SMTDKY 248
G+ +L +N I +FI E ++ E K ++++ + D + FL++ E++ T +
Sbjct: 210 GIHKTLLKNADYIKNFIMEKVK---EHQKLLDVNNPR-DFIDCFLIKMEQENNLEFTLES 265
Query: 249 LRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLV 308
L + AG +TT+ TL + +L KHP + + ++ + C + ++
Sbjct: 266 LVIAVSDLFGAGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQDRSR-- 323
Query: 309 TEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKG-DGVNYMTYAMGR 367
M Y A + E R +P + +A D+ + + KG D + +T +
Sbjct: 324 -------MPYTDAVIHEIQRFIDLLPTNLPHAVTRDVRFRNYFIPKGTDIITSLTSVL-- 374
Query: 368 MTYIWGEDAEEFRPERWLVNGVFRSESP-YK----FAAFQAGPRICPGKEFAYRQMKILA 422
D + F + G F ES +K F F AG R+C G+ A ++ +
Sbjct: 375 ------HDEKAFPNPKVFDPGHFLDESGNFKKSDYFMPFSAGKRMCVGEGLARMELFLFL 428
Query: 423 AVLLQFFRFKLVDETKE 439
+LQ F+ + + E K+
Sbjct: 429 TSILQNFKLQSLVEPKD 445
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 90/188 (47%), Gaps = 17/188 (9%)
Query: 263 TTANTLT---WFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKL-VTEAALEKMHY 318
+ ANT+ W + + ++P + A +V+ E G + E + +++A L +
Sbjct: 269 SQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPV 328
Query: 319 LHAALSETLRLYPAVPVDGKNAAEDDIL--PDG-FKVKKGDGVNYMTYAMGRMTYIWGED 375
L + + E+LRL A ++ + A ED L DG + ++K D + M I+ D
Sbjct: 329 LDSIIKESLRLSSAS-LNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIY-PD 386
Query: 376 AEEFRPERWL-VNGVFRS-------ESPYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQ 427
F+ +R+L NG ++ + Y + F +G ICPG+ FA ++K ++L
Sbjct: 387 PLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLS 446
Query: 428 FFRFKLVD 435
+F +L++
Sbjct: 447 YFELELIE 454
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 90/188 (47%), Gaps = 17/188 (9%)
Query: 263 TTANTLT---WFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKL-VTEAALEKMHY 318
+ ANT+ W + + ++P + A +V+ E G + E + +++A L +
Sbjct: 269 SQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPV 328
Query: 319 LHAALSETLRLYPAVPVDGKNAAEDDIL--PDG-FKVKKGDGVNYMTYAMGRMTYIWGED 375
L + + E+LRL A ++ + A ED L DG + ++K D + M I+ D
Sbjct: 329 LDSIIKESLRLSSAS-LNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIY-PD 386
Query: 376 AEEFRPERWL-VNGVFRS-------ESPYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQ 427
F+ +R+L NG ++ + Y + F +G ICPG+ FA ++K ++L
Sbjct: 387 PLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLS 446
Query: 428 FFRFKLVD 435
+F +L++
Sbjct: 447 YFELELIE 454
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 81/209 (38%), Gaps = 39/209 (18%)
Query: 253 TLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAA 312
+ ++AG +T A+ LTW F +L P Q++ A
Sbjct: 215 AVTLLVAGHETVASALTWSFLLLSHRPDWQKRVA-------------------------- 248
Query: 313 LEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIW 372
E AA E LRLYP + + E +L ++ G + Y R+ +
Sbjct: 249 -ESEEAALAAFQEALRLYPPAWILTRR-LERPLLLGEDRLPPGTTLVLSPYVTQRLHF-- 304
Query: 373 GEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFFRFK 432
D E FRPER+L R ++ F G R+C G++FA + I VL FFR
Sbjct: 305 -PDGEAFRPERFLEE---RGTPSGRYFPFGLGQRLCLGRDFALLEGPI---VLRAFFRRF 357
Query: 433 LVDETKEATYRTMFTLHVDKGLHLYAYPR 461
+D TL + GL A PR
Sbjct: 358 RLDPLPFPRVLAQVTLRPEGGLP--ARPR 384
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 161/398 (40%), Gaps = 49/398 (12%)
Query: 61 WNLMRDLFGDGI-FAVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAA 119
++ M +FG+G+ +A + R Q + E + ++F+ ++ + KF A
Sbjct: 75 YSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTVAKFQNFAPSI-----QHEVRKFMKAN 129
Query: 120 AAKQA--IDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKAFDDSNFIVYCRYV 177
K I++ D +++ + FG +L + F K +S I ++
Sbjct: 130 WNKDEGEINILDDCSAMIINTACQCLFGEDLRKRLDARQFAQLLAKM--ESCLIPAAVFL 187
Query: 178 DVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
W LK L ++ R+ + I I RE+ + + D D+L+ L
Sbjct: 188 P--WILKLPLP---QSYRCRDARAELQDILSEIIIAREK-EEAQKDTNTSDLLAGLLGAV 241
Query: 238 EKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE-AQ 296
+D M+ + + + + AG+ T+ T TW L +D R A+
Sbjct: 242 YRDGTRMSQHEVCGMIVAAMFAGQHTSTITTTWSLLHL-----------MDPRNKRHLAK 290
Query: 297 GNLCADEF-AKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKG 355
+ DEF A+L + +E+M + E++R P + + + + + + V +G
Sbjct: 291 LHQEIDEFPAQLNYDNVMEEMPFAEQCARESIRRDPPLVMLMRKVLKP-VQVGKYVVPEG 349
Query: 356 DGVNYMTYAMGRMTYIWGEDA----EEFRPER--WLVNGVFRSESPYKFAAFQAGPRICP 409
D + A + E+A E+ PER LV+G F F AG C
Sbjct: 350 DII-----ACSPLLSHQDEEAFPNPREWNPERNMKLVDGAF--------CGFGAGVHKCI 396
Query: 410 GKEFAYRQMKILAAVLLQFFRFKLVDETKEATYRTMFT 447
G++F Q+K + A +L+ + F+L+ E Y TM
Sbjct: 397 GEKFGLLQVKTVLATVLRDYDFELLGPLPEPNYHTMVV 434
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 105/260 (40%), Gaps = 42/260 (16%)
Query: 182 ELKRYLNIGMEASLKRNIKLIDSFIFELIRCKR--EQMKNVELDRGKEDILSRFLLESEK 239
+L R+ ++ A ++ D EL+ C + + N +++ + L L S
Sbjct: 187 KLTRWSDVTTAAPGGGVVESWDQRKTELLECAAYFQVLWNERVNKDPGNDLISMLAHSPA 246
Query: 240 DPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNL 299
++YL ++ L I+ G DTT N++T L K+P
Sbjct: 247 TRNMTPEEYLGNVLL-LIVGGNDTTRNSMTGGVLALHKNP-------------------- 285
Query: 300 CADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVN 359
D+FAKL AL + + E +R + + A D L G ++KGD V
Sbjct: 286 --DQFAKLKANPAL-----VETMVPEIIRWQTPLAHMRRTAIADSEL-GGKTIRKGDKVV 337
Query: 360 YMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFAYRQMK 419
Y+ R +D RPE ++++ P + +F G C G A Q++
Sbjct: 338 MWYYSGNR------DDEVIDRPEEFIID----RPRPRQHLSFGFGIHRCVGNRLAEMQLR 387
Query: 420 IL-AAVLLQFFRFKLVDETK 438
IL +L +F R +++ E +
Sbjct: 388 ILWEEILTRFSRIEVMAEPE 407
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 155/391 (39%), Gaps = 39/391 (9%)
Query: 61 WNLMRDLFGDGI-FAVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAA 119
++ M +FG+G+ +A + R Q + E + ++F A+ + KF A
Sbjct: 89 YSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAI-----QHEVRKFMAAN 143
Query: 120 AAKQA--IDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKAFDDSNFIVYCRYV 177
K I++ + +++ + FG +L + F K +S+ I
Sbjct: 144 WDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDARRFAQLLAKM--ESSLIP----A 197
Query: 178 DVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
VF + L + A + + E+I ++E+ V D D+LS L
Sbjct: 198 AVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEE--EVNKDSSTSDLLSGLLSAV 255
Query: 238 EKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQG 297
+D M+ + + + + AG+ T++ T TW L HP A + EA +
Sbjct: 256 YRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHL-MHP-----ANVKHLEALRKE- 308
Query: 298 NLCADEF-AKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGD 356
+EF A+L +++M + E++R P + + + D + + V KGD
Sbjct: 309 ---IEEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMAD-VKVGSYVVPKGD 364
Query: 357 GVNYMTYAMGRMTYIWGEDAEEF-RPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFAY 415
+ + D E F P RW + E F F AG C G++F
Sbjct: 365 -------IIACSPLLSHHDEEAFPEPRRWDPERDEKVEG--AFIGFGAGVHKCIGQKFGL 415
Query: 416 RQMKILAAVLLQFFRFKLV-DETKEATYRTM 445
Q+K + A + + F+L+ DE + Y TM
Sbjct: 416 LQVKTILATAFRSYDFQLLRDEVPDPDYHTM 446
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 155/393 (39%), Gaps = 39/393 (9%)
Query: 61 WNLMRDLFGDGI-FAVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAA 119
++ M +FG+G+ +A + R Q + E + ++F A+ + KF A
Sbjct: 76 YSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAI-----QHEVRKFMAAN 130
Query: 120 AAKQA--IDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKAFDDSNFIVYCRYV 177
K I++ + +++ + FG +L + F K +S+ I
Sbjct: 131 WDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDARRFAQLLAKM--ESSLIP----A 184
Query: 178 DVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
VF + L + A + + E+I ++E+ V D D+LS L
Sbjct: 185 AVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEE--EVNKDSSTSDLLSGLLSAV 242
Query: 238 EKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQG 297
+D M+ + + + + AG+ T++ T TW L HP A + EA +
Sbjct: 243 YRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHL-MHP-----ANVKHLEALRKE- 295
Query: 298 NLCADEF-AKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGD 356
+EF A+L +++M + E++R P + + + D + + V KGD
Sbjct: 296 ---IEEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMAD-VKVGSYVVPKGD 351
Query: 357 GVNYMTYAMGRMTYIWGEDAEEF-RPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFAY 415
+ + D E F P RW + E F F AG C G++F
Sbjct: 352 -------IIACSPLLSHHDEEAFPEPRRWDPERDEKVEG--AFIGFGAGVHKCIGQKFGL 402
Query: 416 RQMKILAAVLLQFFRFKLV-DETKEATYRTMFT 447
Q+K + A + + F+L+ DE + Y TM
Sbjct: 403 LQVKTILATAFRSYDFQLLRDEVPDPDYHTMVV 435
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 155/393 (39%), Gaps = 39/393 (9%)
Query: 61 WNLMRDLFGDGI-FAVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAA 119
++ M +FG+G+ +A + R Q + E + ++F A+ + KF A
Sbjct: 77 YSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAI-----QHEVRKFMAAN 131
Query: 120 AAKQA--IDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKAFDDSNFIVYCRYV 177
K I++ + +++ + FG +L + F K +S+ I
Sbjct: 132 WDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDARRFAQLLAKM--ESSLIP----A 185
Query: 178 DVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
VF + L + A + + E+I ++E+ V D D+LS L
Sbjct: 186 AVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEE--EVNKDSSTSDLLSGLLSAV 243
Query: 238 EKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQG 297
+D M+ + + + + AG+ T++ T TW L HP A + EA +
Sbjct: 244 YRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHL-MHP-----ANVKHLEALRKE- 296
Query: 298 NLCADEF-AKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGD 356
+EF A+L +++M + E++R P + + + D + + V KGD
Sbjct: 297 ---IEEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMAD-VKVGSYVVPKGD 352
Query: 357 GVNYMTYAMGRMTYIWGEDAEEF-RPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFAY 415
+ + D E F P RW + E F F AG C G++F
Sbjct: 353 -------IIACSPLLSHHDEEAFPEPRRWDPERDEKVEG--AFIGFGAGVHKCIGQKFGL 403
Query: 416 RQMKILAAVLLQFFRFKLV-DETKEATYRTMFT 447
Q+K + A + + F+L+ DE + Y TM
Sbjct: 404 LQVKTILATAFRSYDFQLLRDEVPDPDYHTMVV 436
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 155/393 (39%), Gaps = 39/393 (9%)
Query: 61 WNLMRDLFGDGI-FAVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAA 119
++ M +FG+G+ +A + R Q + E + ++F A+ + KF A
Sbjct: 75 YSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAI-----QHEVRKFMAAN 129
Query: 120 AAKQA--IDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKAFDDSNFIVYCRYV 177
K I++ + +++ + FG +L + F K +S+ I
Sbjct: 130 WDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDARRFAQLLAKM--ESSLIP----A 183
Query: 178 DVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
VF + L + A + + E+I ++E+ V D D+LS L
Sbjct: 184 AVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEE--EVNKDSSTSDLLSGLLSAV 241
Query: 238 EKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQG 297
+D M+ + + + + AG+ T++ T TW L HP A + EA +
Sbjct: 242 YRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHL-MHP-----ANVKHLEALRKE- 294
Query: 298 NLCADEF-AKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGD 356
+EF A+L +++M + E++R P + + + D + + V KGD
Sbjct: 295 ---IEEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMAD-VKVGSYVVPKGD 350
Query: 357 GVNYMTYAMGRMTYIWGEDAEEF-RPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFAY 415
+ + D E F P RW + E F F AG C G++F
Sbjct: 351 -------IIACSPLLSHHDEEAFPEPRRWDPERDEKVEG--AFIGFGAGVHKCIGQKFGL 401
Query: 416 RQMKILAAVLLQFFRFKLV-DETKEATYRTMFT 447
Q+K + A + + F+L+ DE + Y TM
Sbjct: 402 LQVKTILATAFRSYDFQLLRDEVPDPDYHTMVV 434
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 155/393 (39%), Gaps = 39/393 (9%)
Query: 61 WNLMRDLFGDGI-FAVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAA 119
++ M +FG+G+ +A + R Q + E + ++F A+ + KF A
Sbjct: 76 YSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAI-----QHEVRKFMAAN 130
Query: 120 AAKQA--IDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKAFDDSNFIVYCRYV 177
K I++ + +++ + FG +L + F K +S+ I
Sbjct: 131 WDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDARRFAQLLAKM--ESSLIP----A 184
Query: 178 DVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES 237
VF + L + A + + E+I ++E+ V D D+LS L
Sbjct: 185 AVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEE--EVNKDSSTSDLLSGLLSAV 242
Query: 238 EKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQG 297
+D M+ + + + + AG+ T++ T TW L HP A + EA +
Sbjct: 243 YRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHL-MHP-----ANVKHLEALRKE- 295
Query: 298 NLCADEF-AKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGD 356
+EF A+L +++M + E++R P + + + D + + V KGD
Sbjct: 296 ---IEEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMAD-VKVGSYVVPKGD 351
Query: 357 GVNYMTYAMGRMTYIWGEDAEEF-RPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFAY 415
+ + D E F P RW + E F F AG C G++F
Sbjct: 352 -------IIACSPLLSHHDEEAFPEPRRWDPERDEKVEG--AFIGFGAGVHKCIGQKFGL 402
Query: 416 RQMKILAAVLLQFFRFKLV-DETKEATYRTMFT 447
Q+K + A + + F+L+ DE + Y TM
Sbjct: 403 LQVKTILATAFRSYDFQLLRDEVPDPDYHTMVV 435
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 82/209 (39%), Gaps = 39/209 (18%)
Query: 253 TLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAA 312
+ ++AG +T A+ LTW F +L P Q++ A
Sbjct: 215 AVTLLVAGHETVASALTWSFLLLSHRPDWQKRVA-------------------------- 248
Query: 313 LEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIW 372
E AA E LRLYP + + E +L ++ +G + Y R+ +
Sbjct: 249 -ESEEAALAAFQEALRLYPPAWILTRR-LERPLLLGEDRLPQGTTLVLSPYVTQRLYF-- 304
Query: 373 GEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFFRFK 432
+ E F+PER+L R ++ F G R+C G++FA + I VL FFR
Sbjct: 305 -PEGEAFQPERFLAE---RGTPSGRYFPFGLGQRLCLGRDFALLEGPI---VLRAFFRRF 357
Query: 433 LVDETKEATYRTMFTLHVDKGLHLYAYPR 461
+D TL + GL A PR
Sbjct: 358 RLDPLPFPRVLAQVTLRPEGGLP--ARPR 384
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 77/192 (40%), Gaps = 20/192 (10%)
Query: 235 LESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATE 294
L+ E P ++TD + A +DT + L W + ++P +Q + ++ +
Sbjct: 275 LDLENVPATITDIF---------GASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVG 325
Query: 295 AQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKK 354
C + L Y+ A L E +R VPV +A + G+ + K
Sbjct: 326 RDRLPCMGDQPNLP---------YVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPK 376
Query: 355 GDGVNYMTYAMGRMTYIWGEDAEEFRPERWL-VNGVFRSESPYKFAAFQAGPRICPGKEF 413
V +++ W + E F P R+L +G+ + + F G R C G+E
Sbjct: 377 DTVVFVNQWSVNHDPLKW-PNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEEL 435
Query: 414 AYRQMKILAAVL 425
+ Q+ + ++L
Sbjct: 436 SKMQLFLFISIL 447
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 94/229 (41%), Gaps = 23/229 (10%)
Query: 220 VELDRGKEDILSRFLLESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHP 279
V D D+LS L +D M+ + + + + AG+ T++ T TW L HP
Sbjct: 238 VNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHL-MHP 296
Query: 280 LIQEKAALDVREATEAQGNLCADEF-AKLVTEAALEKMHYLHAALSETLRLYPAVPVDGK 338
A + EA + +EF A+L +++M + E++R P + + +
Sbjct: 297 -----ANVKHLEALRKE----IEEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMR 347
Query: 339 NAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEF-RPERWLVNGVFRSESPYK 397
D + + V KGD + + D E F P RW + E
Sbjct: 348 KVMAD-VKVGSYVVPKGD-------IIACSPLLSHHDEEAFPEPRRWDPERDEKVEG--A 397
Query: 398 FAAFQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLV-DETKEATYRTM 445
F F AG C G++F Q+K + A + + F+L+ DE + Y TM
Sbjct: 398 FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDPDYHTM 446
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 81/392 (20%), Positives = 134/392 (34%), Gaps = 97/392 (24%)
Query: 64 MRDLFGDGIFAVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQ 123
+RD D + ++DG R R LA++ F+ + + V R+ E+L K
Sbjct: 82 VRDFMVDFLQSLDGADHRRLRGLATHPFTPRRITAVQPFV-RSTVEQLIDKLP------- 133
Query: 124 AIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKAFDDSNFIVYCRYV------ 177
G DF F +V C+ +
Sbjct: 134 ----------------------------QGDFDFVQHFAHPL---PALVMCQLLGFPLED 162
Query: 178 -DVFWELKRYLNIGMEASLKRNI--KLIDSF--IFELIRCKREQMKNVELDRGKEDILSR 232
D L N+G+ S ++I K+ +F+ + E+ K D DI+
Sbjct: 163 YDTVGRLSIETNLGLALSNDQDILVKVEQGLGRMFDYLVAAIEKRKVEPGDDLTSDIVRA 222
Query: 233 FLLESEKDPESMTDKY-LRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVRE 291
F + + D Y LR + ++AG +TT + L Y +HP
Sbjct: 223 FH-------DGVLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHP------------ 263
Query: 292 ATEAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFK 351
D++ K+ L A+ E LR P +PV A +D +G +
Sbjct: 264 ----------DQWMKIKENPELAPQ-----AVEEVLRWSPTLPVTATRVAAEDFEVNGVR 308
Query: 352 VKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGK 411
+ G V + R ++ DA+ F + + E+P AF GP C G
Sbjct: 309 IPTGTPVFMCAHVAHRDPRVFA-DADRF-------DITVKREAPS--IAFGGGPHFCLGT 358
Query: 412 EFAYRQMKILAAVLLQFFRFKLVDETKEATYR 443
A ++++ AV R E T+R
Sbjct: 359 ALA--RLELTEAVAALATRLDPPQIAGEITWR 388
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 80/390 (20%), Positives = 156/390 (40%), Gaps = 37/390 (9%)
Query: 61 WNLMRDLFGDGI-FAVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAA 119
+ +M +FG+G+ +A + R Q + E + ++F A+ + + +
Sbjct: 89 YTIMTPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAENWK--- 145
Query: 120 AAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKAFDDSNFIVYCRYVDV 179
+ I++ + +++ + FG +L + F +K +S+ I ++
Sbjct: 146 EDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNARHFAQLLSKM--ESSLIPAAVFMP- 202
Query: 180 FWELKRYLNIGMEASLKRNIKLIDSFIFELI--RCKREQMKNVELDRGKEDILSRFLLES 237
W L+ L + A + + + E+I R K E K D D+L L
Sbjct: 203 -WLLR--LPLPQSARCREARAELQKILGEIIVAREKEEASK----DNNTSDLLGGLLKAV 255
Query: 238 EKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQG 297
+D M+ + + + + AG+ T+ T +W L HP + K LD
Sbjct: 256 YRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHL-MHP--KNKKWLDKLHKE---- 308
Query: 298 NLCADEF-AKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGD 356
DEF A+L + +++M + + E++R P + + + ++ + V KGD
Sbjct: 309 ---IDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPL-LMVMRMVKAEVKVGSYVVPKGD 364
Query: 357 GVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFAYR 416
+ + + EE P L + + F F AG C G++FA
Sbjct: 365 IIA--------CSPLLSHHDEEAFPNPRLWDPERDEKVDGAFIGFGAGVHKCIGQKFALL 416
Query: 417 QMKILAAVLLQFFRFKLV-DETKEATYRTM 445
Q+K + A + + F+L+ DE + Y TM
Sbjct: 417 QVKTILATAFREYDFQLLRDEVPDPDYHTM 446
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 80/392 (20%), Positives = 156/392 (39%), Gaps = 37/392 (9%)
Query: 61 WNLMRDLFGDGI-FAVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAA 119
+ +M +FG+G+ +A + R Q + E + ++F A+ + + +
Sbjct: 74 YTIMTPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAENWK--- 130
Query: 120 AAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKAFDDSNFIVYCRYVDV 179
+ I++ + +++ + FG +L + F +K +S+ I ++
Sbjct: 131 EDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNARHFAQLLSKM--ESSLIPAAVFMP- 187
Query: 180 FWELKRYLNIGMEASLKRNIKLIDSFIFELI--RCKREQMKNVELDRGKEDILSRFLLES 237
W L+ L + A + + + E+I R K E K D D+L L
Sbjct: 188 -WLLR--LPLPQSARCREARAELQKILGEIIVAREKEEASK----DNNTSDLLGGLLKAV 240
Query: 238 EKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQG 297
+D M+ + + + + AG+ T+ T +W L HP + K LD
Sbjct: 241 YRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHL-MHP--KNKKWLDKLHKE---- 293
Query: 298 NLCADEF-AKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGD 356
DEF A+L + +++M + + E++R P + + + ++ + V KGD
Sbjct: 294 ---IDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPL-LMVMRMVKAEVKVGSYVVPKGD 349
Query: 357 GVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFAYR 416
+ + + EE P L + + F F AG C G++FA
Sbjct: 350 IIA--------CSPLLSHHDEEAFPNPRLWDPERDEKVDGAFIGFGAGVHKCIGQKFALL 401
Query: 417 QMKILAAVLLQFFRFKLV-DETKEATYRTMFT 447
Q+K + A + + F+L+ DE + Y TM
Sbjct: 402 QVKTILATAFREYDFQLLRDEVPDPDYHTMVV 433
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 81/392 (20%), Positives = 134/392 (34%), Gaps = 97/392 (24%)
Query: 64 MRDLFGDGIFAVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQ 123
+RD D + ++DG R R LA++ F+ + + V R+ E+L K
Sbjct: 92 VRDFMVDFLQSLDGADHRRLRGLATHPFTPRRITAVQPFV-RSTVEQLIDKLP------- 143
Query: 124 AIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKAFDDSNFIVYCRYV------ 177
G DF F +V C+ +
Sbjct: 144 ----------------------------QGDFDFVQHFPHPL---PALVMCQLLGFPLED 172
Query: 178 -DVFWELKRYLNIGMEASLKRNI--KLIDSF--IFELIRCKREQMKNVELDRGKEDILSR 232
D L N+G+ S ++I K+ +F+ + E+ K D DI+
Sbjct: 173 YDTVGRLSIETNLGLALSNDQDILVKVEQGLGRMFDYLVAAIEKRKVEPGDDLTSDIVRA 232
Query: 233 FLLESEKDPESMTDKY-LRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVRE 291
F + + D Y LR + ++AG +TT + L Y +HP
Sbjct: 233 FH-------DGVLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHP------------ 273
Query: 292 ATEAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFK 351
D++ K+ L A+ E LR P +PV A +D +G +
Sbjct: 274 ----------DQWMKIKENPELAPQ-----AVEEVLRWSPTLPVTATRVAAEDFEVNGVR 318
Query: 352 VKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGK 411
+ G V + R ++ DA+ F + + E+P AF GP C G
Sbjct: 319 IPTGTPVFMCAHVAHRDPRVFA-DADRF-------DITVKREAPS--IAFGGGPHFCLGT 368
Query: 412 EFAYRQMKILAAVLLQFFRFKLVDETKEATYR 443
A ++++ AV R E T+R
Sbjct: 369 ALA--RLELTEAVAALATRLDPPQIAGEITWR 398
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 44/208 (21%)
Query: 236 ESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEA 295
+ E D + ++ + LRD L I AG +TT N + + L P ++ AL VR
Sbjct: 219 DDEGDGDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRP---DQLAL-VR----- 269
Query: 296 QGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAV---PVDGKNAAEDDILPDGFKV 352
+G + +A +V ETLR PAV P+ + A D LPDG +
Sbjct: 270 KGEVT---WADVV---------------EETLRHEPAVKHLPL--RYAVTDIALPDGRTI 309
Query: 353 KKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKE 412
+G+ + +YA W EDA+ F R + + AF G C G
Sbjct: 310 ARGEPI-LASYAAANRHPDWHEDADTFDATRTV----------KEHLAFGHGVHFCLGAP 358
Query: 413 FAYRQMKI-LAAVLLQFFRFKLVDETKE 439
A ++ + L ++ +F +L D +E
Sbjct: 359 LARMEVTLALESLFGRFPDLRLADPAEE 386
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 80/392 (20%), Positives = 156/392 (39%), Gaps = 37/392 (9%)
Query: 61 WNLMRDLFGDGI-FAVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAA 119
+ +M +FG+G+ +A + R Q + E + ++F A+ + + +
Sbjct: 80 YTIMTPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAENWK--- 136
Query: 120 AAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKAFDDSNFIVYCRYVDV 179
+ I++ + +++ + FG +L + F +K +S+ I ++
Sbjct: 137 EDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNARHFAQLLSKM--ESSLIPAAVFMP- 193
Query: 180 FWELKRYLNIGMEASLKRNIKLIDSFIFELI--RCKREQMKNVELDRGKEDILSRFLLES 237
W L+ L + A + + + E+I R K E K D D+L L
Sbjct: 194 -WLLR--LPLPQSARCREARAELQKILGEIIVAREKEEASK----DNNTSDLLGGLLKAV 246
Query: 238 EKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQG 297
+D M+ + + + + AG+ T+ T +W L HP + K LD
Sbjct: 247 YRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHL-MHP--KNKKWLDKLHKE---- 299
Query: 298 NLCADEF-AKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGD 356
DEF A+L + +++M + + E++R P + + + ++ + V KGD
Sbjct: 300 ---IDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPL-LMVMRMVKAEVKVGSYVVPKGD 355
Query: 357 GVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFAYR 416
+ + + EE P L + + F F AG C G++FA
Sbjct: 356 IIA--------CSPLLSHHDEEAFPNPRLWDPERDEKVDGAFIGFGAGVHKCIGQKFALL 407
Query: 417 QMKILAAVLLQFFRFKLV-DETKEATYRTMFT 447
Q+K + A + + F+L+ DE + Y TM
Sbjct: 408 QVKTILATAFREYDFQLLRDEVPDPDYHTMVV 439
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 82/203 (40%), Gaps = 43/203 (21%)
Query: 226 KEDILSRFLLESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKA 285
++D++S L EKD +T++ + IAG +TT N ++ L +HP +
Sbjct: 203 QQDMISMLLKGREKD--KLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHP----EQ 256
Query: 286 ALDVREATEAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAED-D 344
L +RE + G A+ E LR + + A+ED D
Sbjct: 257 LLKLRENPDLIGT-----------------------AVEECLRYESPTQMTARVASEDID 293
Query: 345 ILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAG 404
I G +++G+ V + A R I+ P+ V + RS +P+ +F G
Sbjct: 294 IC--GVTIRQGEQVYLLLGAANRDPSIFT------NPD---VFDITRSPNPH--LSFGHG 340
Query: 405 PRICPGKEFAYRQMKILAAVLLQ 427
+C G A + +I LLQ
Sbjct: 341 HHVCLGSSLARLEAQIAINTLLQ 363
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Query: 202 IDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEKDPESMTDKYLRDITLNFIIAGK 261
+ ++ LI KR Q ED+LS + S++D +T + L + ++AG
Sbjct: 214 MSGYLSRLIDSKRGQ--------DGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGH 265
Query: 262 DTTANTLTWFFYMLCKHP 279
+TT N + Y L HP
Sbjct: 266 ETTVNLIANGMYALLSHP 283
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Query: 202 IDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEKDPESMTDKYLRDITLNFIIAGK 261
+ ++ LI KR Q ED+LS + S++D +T + L + ++AG
Sbjct: 214 MSGYLSRLIDSKRGQ--------DGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGH 265
Query: 262 DTTANTLTWFFYMLCKHP 279
+TT N + Y L HP
Sbjct: 266 ETTVNLIANGMYALLSHP 283
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Query: 202 IDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEKDPESMTDKYLRDITLNFIIAGK 261
+ ++ LI KR Q ED+LS + S++D +T + L + ++AG
Sbjct: 214 MSGYLSRLIDSKRGQ--------DGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGH 265
Query: 262 DTTANTLTWFFYMLCKHP 279
+TT N + Y L HP
Sbjct: 266 ETTVNLIANGMYALLSHP 283
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 54/135 (40%), Gaps = 14/135 (10%)
Query: 308 VTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGR 367
+ A +++ Y + E R YP P A++D +G +G V Y
Sbjct: 255 IRAALVQQPDYAELFVQEVRRFYPFFPAVVARASQD-FEWEGMAFPEGRQVVLDLYGSNH 313
Query: 368 MTYIWGEDAEEFRPERWLVNGVFRS--ESPYKFAAFQAGPRI----CPGKEFAYRQMKIL 421
W D +EFRPER FR+ E + F G CPG+ MK+
Sbjct: 314 DAATWA-DPQEFRPER------FRAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVA 366
Query: 422 AAVLLQFFRFKLVDE 436
A +L+ R+ + D+
Sbjct: 367 AHLLVNAMRYDVPDQ 381
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 54/135 (40%), Gaps = 14/135 (10%)
Query: 308 VTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGR 367
+ A +++ Y + E R YP P A++D +G +G V Y
Sbjct: 255 IRAALVQQPDYAELFVQEVRRFYPFFPAVVARASQD-FEWEGMAFPEGRQVVLDLYGSNH 313
Query: 368 MTYIWGEDAEEFRPERWLVNGVFRS--ESPYKFAAFQAGPRI----CPGKEFAYRQMKIL 421
W D +EFRPER FR+ E + F G CPG+ MK+
Sbjct: 314 DAATWA-DPQEFRPER------FRAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVA 366
Query: 422 AAVLLQFFRFKLVDE 436
A +L+ R+ + D+
Sbjct: 367 AHLLVNAMRYDVPDQ 381
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 54/135 (40%), Gaps = 14/135 (10%)
Query: 308 VTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGR 367
+ A +++ Y + E R YP P A++D +G +G V Y
Sbjct: 255 IRAALVQQPDYAELFVQEVRRFYPFFPAVVARASQD-FEWEGMAFPEGRQVVLDLYGSNH 313
Query: 368 MTYIWGEDAEEFRPERWLVNGVFRS--ESPYKFAAFQAGPRI----CPGKEFAYRQMKIL 421
W D +EFRPER FR+ E + F G CPG+ MK+
Sbjct: 314 DAATWA-DPQEFRPER------FRAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVA 366
Query: 422 AAVLLQFFRFKLVDE 436
A +L+ R+ + D+
Sbjct: 367 AHLLVNAMRYDVPDQ 381
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 54/135 (40%), Gaps = 14/135 (10%)
Query: 308 VTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGR 367
+ A +++ Y + E R YP P A++D +G +G V Y
Sbjct: 263 IRAALVQQPDYAELFVQEVRRFYPFFPAVVARASQD-FEWEGMAFPEGRQVVLDLYGSNH 321
Query: 368 MTYIWGEDAEEFRPERWLVNGVFRS--ESPYKFAAFQAGPRI----CPGKEFAYRQMKIL 421
W D +EFRPER FR+ E + F G CPG+ MK+
Sbjct: 322 DAATWA-DPQEFRPER------FRAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVA 374
Query: 422 AAVLLQFFRFKLVDE 436
A +L+ R+ + D+
Sbjct: 375 AHLLVNAMRYDVPDQ 389
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 54/135 (40%), Gaps = 14/135 (10%)
Query: 308 VTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGR 367
+ A +++ Y + E R YP P A++D +G +G V Y
Sbjct: 263 IRAALVQQPDYAELFVQEVRRFYPFFPAVVARASQD-FEWEGMAFPEGRQVVLDLYGSNH 321
Query: 368 MTYIWGEDAEEFRPERWLVNGVFRS--ESPYKFAAFQAGPRI----CPGKEFAYRQMKIL 421
W D +EFRPER FR+ E + F G CPG+ MK+
Sbjct: 322 DAATWA-DPQEFRPER------FRAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVA 374
Query: 422 AAVLLQFFRFKLVDE 436
A +L+ R+ + D+
Sbjct: 375 AHLLVNAMRYDVPDQ 389
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 54/135 (40%), Gaps = 14/135 (10%)
Query: 308 VTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGR 367
+ A +++ Y + E R YP P A++D +G +G V Y
Sbjct: 263 IRAALVQQPDYAELFVQEVRRFYPFGPAVVARASQD-FEWEGMAFPEGRQVVLDLYGSNH 321
Query: 368 MTYIWGEDAEEFRPERWLVNGVFRS--ESPYKFAAFQAGPRI----CPGKEFAYRQMKIL 421
W D +EFRPER FR+ E + F G CPG+ MK+
Sbjct: 322 DAATWA-DPQEFRPER------FRAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVA 374
Query: 422 AAVLLQFFRFKLVDE 436
A +L+ R+ + D+
Sbjct: 375 AHLLVNAMRYDVPDQ 389
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 79/201 (39%), Gaps = 39/201 (19%)
Query: 228 DILSRFLLESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAAL 287
D L L+++ +S++++ L D+ + ++AG ++T + F Y+L P ++ +
Sbjct: 223 DDLVSALVQARDQQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQ--- 279
Query: 288 DVREATEAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYP-AVPVDGKNAAEDDIL 346
L++ + +A+ E R P V A +D+
Sbjct: 280 ------------------------LLDRPELIPSAVEELTRWVPLGVGTAAPRYAVEDVT 315
Query: 347 PDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPR 406
G ++ G+ V T A R D +F P+ + + +P + F G
Sbjct: 316 LRGVTIRAGEPVLASTGAANR-------DQAQF-PD---ADRIDVDRTPNQHLGFGHGVH 364
Query: 407 ICPGKEFAYRQMKILAAVLLQ 427
C G A ++++ VLLQ
Sbjct: 365 HCLGAPLARVELQVALEVLLQ 385
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 35.0 bits (79), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 97/262 (37%), Gaps = 39/262 (14%)
Query: 185 RYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEKDPESM 244
R L +G+ + K + + + E + + + + D+L+ LL++E D +
Sbjct: 181 RALGVGLVPRVDEETKTLVASVTEGLALLHGVLDERRRNPLENDVLT-MLLQAEADGSRL 239
Query: 245 TDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEF 304
+ K L + I AG DTT + + L + P + E +A+ L
Sbjct: 240 STKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSP--------EALELVKAEPGL----- 286
Query: 305 AKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYA 364
+ AL E LR + + A D+ G +KKG+ V + +
Sbjct: 287 --------------MRNALDEVLRFENILRIGTVRFARQDLEYCGASIKKGEMVFLLIPS 332
Query: 365 MGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFAYRQMKILAAV 424
R ++ RP+ V V R S A+ GP +CPG A + +I
Sbjct: 333 ALRDGTVFS------RPD---VFDVRRDTS--ASLAYGRGPHVCPGVSLARLEAEIAVGT 381
Query: 425 LLQFFRFKLVDETKEATYRTMF 446
+ + F + ET Y F
Sbjct: 382 IFRRFPEMKLKETPVFGYHPAF 403
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 35.0 bits (79), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 86/210 (40%), Gaps = 42/210 (20%)
Query: 228 DILSRFLLESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAAL 287
D L+ L+++ ++ + +TD + + AG +TT + + L HP +++A +
Sbjct: 211 DDLTSALIQASENGDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHP--EQRALV 268
Query: 288 DVREATEAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRL-YPAVPVDGKNAAEDDIL 346
EA E++ +V ETLR P V + AAED +
Sbjct: 269 LSGEA----------EWSAVV---------------EETLRFSTPTSHVLIRFAAED--V 301
Query: 347 PDGFKV-KKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGP 405
P G +V GD + A+GR G A+ F R N + +F GP
Sbjct: 302 PVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTSGN---------RHISFGHGP 352
Query: 406 RICPGKEFAYRQMKILAAVLLQFFRFKLVD 435
+CPG A +M+ A+ + RF +D
Sbjct: 353 HVCPGA--ALSRMEAGVALPALYARFPHLD 380
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 35.0 bits (79), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 82/205 (40%), Gaps = 47/205 (22%)
Query: 228 DILSRFLLESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAAL 287
D L L+++ +S++++ L D+ + ++AG ++T + F Y+L P ++ +
Sbjct: 223 DDLVSALVQARDQQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQ--- 279
Query: 288 DVREATEAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYP-----AVPVDGKNAAE 342
L++ + +A+ E R P AVP + A E
Sbjct: 280 ------------------------LLDRPELIPSAVEELTRWVPLGVGTAVP---RYAVE 312
Query: 343 DDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQ 402
D L G ++ G+ V T A R D +F P+ + + +P + F
Sbjct: 313 DVTL-RGVTIRAGEPVLASTGAANR-------DQAQF-PD---ADRIDVDRTPNQHLGFG 360
Query: 403 AGPRICPGKEFAYRQMKILAAVLLQ 427
G C G A ++++ VLLQ
Sbjct: 361 HGVHHCLGAPLARVELQVALEVLLQ 385
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 97/262 (37%), Gaps = 39/262 (14%)
Query: 185 RYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEKDPESM 244
R L +G+ + K + + + E + + + + D+L+ LL++E D +
Sbjct: 181 RALGVGLVPRVDEETKTLVASVTEGLALLHGVLDERRRNPLENDVLT-MLLQAEADGSRL 239
Query: 245 TDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEF 304
+ K L + I AG DTT + + L + P + E +A+ L
Sbjct: 240 STKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSP--------EALELVKAEPGL----- 286
Query: 305 AKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYA 364
+ AL E LR + + A D+ G +KKG+ V + +
Sbjct: 287 --------------MRNALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPS 332
Query: 365 MGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFAYRQMKILAAV 424
R ++ RP+ V V R S A+ GP +CPG A + +I
Sbjct: 333 ALRDGTVFS------RPD---VFDVRRDTS--ASLAYGRGPHVCPGVSLARLEAEIAVGT 381
Query: 425 LLQFFRFKLVDETKEATYRTMF 446
+ + F + ET Y F
Sbjct: 382 IFRRFPEMKLKETPVFGYHPAF 403
>pdb|2YOO|A Chain A, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|B Chain B, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|C Chain C, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|D Chain D, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|3ZBY|A Chain A, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|B Chain B, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|C Chain C, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|D Chain D, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|E Chain E, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|F Chain F, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
Length = 407
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 95/240 (39%), Gaps = 47/240 (19%)
Query: 200 KLIDSFIFELIRCKREQMKNVELDRGKE--DILSRFLLESEKDPESMTDKYLRDITLNFI 257
KL+D+F E K+V R E D L L+ SE + + M+D + TL +
Sbjct: 177 KLMDTFA-----AYTEFTKDVITKRRAEPTDDLFSVLVNSEVEGQRMSDDEIVFETLLIL 231
Query: 258 IAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMH 317
I G +TT +TL+ L +H D++ LV + L
Sbjct: 232 IGGDETTRHTLSGGTEQLLRH----------------------RDQWDALVADVDL---- 265
Query: 318 YLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAE 377
L A+ E LR V + D + G +++ G+ + M + ++G D +
Sbjct: 266 -LPGAIEEMLRWTSPVKNMCRTLTADTVF-HGTELRAGEKIMLMFESANFDESVFG-DPD 322
Query: 378 EFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFAYRQMKILAA-VLLQFFRFKLVDE 436
FR +R +P AF G C G + A +++++ VL + +L D+
Sbjct: 323 NFRIDR----------NPNSHVAFGFGTHFCLGNQLARLELRLMTERVLRRLPDLRLADD 372
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 79/201 (39%), Gaps = 39/201 (19%)
Query: 228 DILSRFLLESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAAL 287
D L L+++ +S++++ L D+ + ++AG ++T + F Y+L P ++ +
Sbjct: 223 DDLVSALVQARDQQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQ--- 279
Query: 288 DVREATEAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYP-AVPVDGKNAAEDDIL 346
L++ + +A+ E R P V A +D+
Sbjct: 280 ------------------------LLDRPELIPSAVEELTRWVPLGVGTAFPRYAVEDVT 315
Query: 347 PDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPR 406
G ++ G+ V T A R D +F P+ + + +P + F G
Sbjct: 316 LRGVTIRAGEPVLASTGAANR-------DQAQF-PD---ADRIDVDRTPNQHLGFGHGVH 364
Query: 407 ICPGKEFAYRQMKILAAVLLQ 427
C G A ++++ VLLQ
Sbjct: 365 HCLGAPLARVELQVALEVLLQ 385
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 29/163 (17%)
Query: 265 ANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLHAALS 324
NTL W + + + A ++R A ++ G+ VT A+E+M + +
Sbjct: 286 PNTLKW---IGLAGENLHTQLAEEIRGAIKSYGDGN-------VTLEAIEQMPLTKSVVY 335
Query: 325 ETLRLYPAVPVDGKNAAEDDILPD---GFKVKKGDGV-NYMTYAMGRMTYIWGEDAEEFR 380
E+LR+ P VP A + + F+VKKG+ + Y +A + EE+
Sbjct: 336 ESLRIEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVF--DRPEEYV 393
Query: 381 PERWLVNGVFRSESPYKFAAFQAGP---------RICPGKEFA 414
P+R++ +G E+ K+ + GP + C GK+F
Sbjct: 394 PDRFVGDG----EALLKYVWWSNGPETESPTVENKQCAGKDFV 432
>pdb|1LFK|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LG9|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LGF|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
Length = 398
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 70/200 (35%), Gaps = 39/200 (19%)
Query: 245 TDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEF 304
TD+ LR + ++AG D + + + +HP +D E DE
Sbjct: 222 TDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHP-----EQIDAFRGDEQSAQRAVDEL 276
Query: 305 AKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYA 364
+ YL S T R+ A +D+ G ++KKGD V A
Sbjct: 277 -----------IRYLTVPYSPTPRI-----------AREDLTLAGQEIKKGDSVICSLPA 314
Query: 365 MGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFAYRQMK-ILAA 423
R + + V+ + + P AF G C G A +++ +
Sbjct: 315 ANRDPALAPD-----------VDRLDVTREPIPHVAFGHGVHHCLGAALARLELRTVFTE 363
Query: 424 VLLQFFRFKLVDETKEATYR 443
+ +F +L D ++ +R
Sbjct: 364 LWRRFPALRLADPAQDTEFR 383
>pdb|2WM4|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp124 In Complex With Phytanic Acid
pdb|2WM5|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp124
Length = 435
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 80/204 (39%), Gaps = 32/204 (15%)
Query: 78 DKWRHQR--KLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLLKSS 135
D RHQR + S F+ K++ +AV R A +L S +QA L S
Sbjct: 121 DDPRHQRLRSIVSRAFTPKVVARIEAAV-RDRAHRLVSSMIANNPDRQAD------LVSE 173
Query: 136 LDSIFKVGFGVELNSLSGSDDFGNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASL 195
L + ++ + +D + F +N I+ D+ + ++ + +
Sbjct: 174 LAGPLPLQIICDMMGIPKAD-----HQRIFHWTNVILGFGDPDLATDFDEFMQVSAD--- 225
Query: 196 KRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEKDPESMTDKYLRDITLN 255
I ++ L +R D L+ L+E+E D E ++ + + +
Sbjct: 226 ------IGAYATALAEDRRVN---------HHDDLTSSLVEAEVDGERLSSREIASFFIL 270
Query: 256 FIIAGKDTTANTLTWFFYMLCKHP 279
++AG +TT N +T L ++P
Sbjct: 271 LVVAGNETTRNAITHGVLALSRYP 294
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 72/178 (40%), Gaps = 23/178 (12%)
Query: 270 WFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRL 329
W L HP +A VRE + +L +E K + L ETLRL
Sbjct: 275 WVMGYLLTHP----EALRAVREEIQGGKHLRLEERQK--------NTPVFDSVLWETLRL 322
Query: 330 YPAVPVDGKNAAEDDI-LPDG--FKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWL- 385
A + + I L +G + +++GD + + +M + E F+ +R+L
Sbjct: 323 TAAALITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLN 382
Query: 386 -----VNGVFRSESPYKFAAFQAGPR--ICPGKEFAYRQMKILAAVLLQFFRFKLVDE 436
F++ + K+ + G +CPG+ FA +K L +L F +L D+
Sbjct: 383 ADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDK 440
>pdb|3MOG|A Chain A, Crystal Structure Of 3-Hydroxybutyryl-Coa Dehydrogenase
From Escherichia Coli K12 Substr. Mg1655
pdb|3MOG|B Chain B, Crystal Structure Of 3-Hydroxybutyryl-Coa Dehydrogenase
From Escherichia Coli K12 Substr. Mg1655
pdb|3MOG|C Chain C, Crystal Structure Of 3-Hydroxybutyryl-Coa Dehydrogenase
From Escherichia Coli K12 Substr. Mg1655
Length = 483
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 7/60 (11%)
Query: 128 QDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKAFDDSNFIVYCRYVDVFWELKRYL 187
+ V +D+ + G G + L +D G D NF V C + FW+ +R+L
Sbjct: 208 EQVAAPEVIDAALRDGAGFPMGPLELTDLIGQ-------DVNFAVTCSVFNAFWQERRFL 260
>pdb|2ZBX|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (Wild Type) With Imidazole Bound
Length = 412
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 89/236 (37%), Gaps = 61/236 (25%)
Query: 215 EQMKNVELDRGKEDILSRFLLESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYM 274
+Q+ N E+DR E+++S +L +IAG +TTA+ +
Sbjct: 222 DQLANGEIDR--EELISTAML--------------------LLIAGHETTASMTSLSVIT 259
Query: 275 LCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVP 334
L HP +++A L + +L + A+ E LR
Sbjct: 260 LLDHP----------------------EQYAALRADRSL-----VPGAVEELLRYLAIAD 292
Query: 335 VDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSES 394
+ G A DI +G ++ G+GV + R ++ ED P+ ++ R
Sbjct: 293 IAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVY-ED-----PDALDIHRSARHHL 346
Query: 395 PYKFAAFQAGPRICPGKEFAYRQMK-ILAAVLLQFFRFKLVDETKEATYRTMFTLH 449
+ F Q C G+ A +++ IL A++ + +L ++ R T+
Sbjct: 347 AFGFGVHQ-----CLGQNLARLELEVILNALMDRVPTLRLAVPVEQLVLRPGTTIQ 397
>pdb|2ZBY|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant)
pdb|2ZBZ|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant) In Complex With
1,25-Dihydroxyvitamin D3
Length = 412
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 89/236 (37%), Gaps = 61/236 (25%)
Query: 215 EQMKNVELDRGKEDILSRFLLESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYM 274
+Q+ N E+DR E+++S +L +IAG +TTA+ +
Sbjct: 222 DQLANGEIDR--EELISTAML--------------------LLIAGHETTASMTSLSVIT 259
Query: 275 LCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVP 334
L HP +++A L + +L + A+ E LR
Sbjct: 260 LLDHP----------------------EQYAALRADRSL-----VPGAVEELLRYLAIAD 292
Query: 335 VDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSES 394
+ G A DI +G ++ G+GV + R ++ ED P+ ++ R
Sbjct: 293 IAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVY-ED-----PDALDIHRSARHHL 346
Query: 395 PYKFAAFQAGPRICPGKEFAYRQMK-ILAAVLLQFFRFKLVDETKEATYRTMFTLH 449
+ F Q C G+ A +++ IL A++ + +L ++ R T+
Sbjct: 347 AFGFGVHQ-----CLGQNLARLELEVILNALMDRVPTLRLAVPVEQLVLRPGTTIQ 397
>pdb|3CV8|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84f Mutant)
Length = 412
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 89/236 (37%), Gaps = 61/236 (25%)
Query: 215 EQMKNVELDRGKEDILSRFLLESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYM 274
+Q+ N E+DR E+++S +L +IAG +TTA+ +
Sbjct: 222 DQLANGEIDR--EELISTAML--------------------LLIAGHETTASMTSLSVIT 259
Query: 275 LCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVP 334
L HP +++A L + +L + A+ E LR
Sbjct: 260 LLDHP----------------------EQYAALRADRSL-----VPGAVEELLRYLAIAD 292
Query: 335 VDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSES 394
+ G A DI +G ++ G+GV + R ++ ED P+ ++ R
Sbjct: 293 IAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVY-ED-----PDALDIHRSARHHL 346
Query: 395 PYKFAAFQAGPRICPGKEFAYRQMK-ILAAVLLQFFRFKLVDETKEATYRTMFTLH 449
+ F Q C G+ A +++ IL A++ + +L ++ R T+
Sbjct: 347 AFGFGVHQ-----CLGQNLARLELEVILNALMDRVPTLRLAVPVEQLVLRPGTTIQ 397
>pdb|1LNS|A Chain A, Crystal Structure Analysis Of The X-Prolyl Dipeptidyl
Aminopeptidase From Lactococcus Lactis
Length = 763
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 258 IAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMH 317
I + TT N ++ F+Y+LC + K + + E ++G L D + +L
Sbjct: 107 IEAEMTTENIISAFYYLLC----TRRKTGMILVEHWVSEGLLPLDNHYHFFNDKSLAT-- 160
Query: 318 YLHAALSETLRLYPAVPVDGKNAAEDDIL 346
++L E L+ PVD + E+D++
Sbjct: 161 -FDSSLLEREVLWVESPVDSEQRGENDLI 188
>pdb|3CV9|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R73aR84A MUTANT) IN COMPLEX WITH 1ALPHA,25-
Dihydroxyvitamin D3
Length = 412
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 89/236 (37%), Gaps = 61/236 (25%)
Query: 215 EQMKNVELDRGKEDILSRFLLESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYM 274
+Q+ N E+DR E+++S +L +IAG +TTA+ +
Sbjct: 222 DQLANGEIDR--EELISTAML--------------------LLIAGHETTASMTSLSVIT 259
Query: 275 LCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVP 334
L HP +++A L + +L + A+ E LR
Sbjct: 260 LLDHP----------------------EQYAALRADRSL-----VPGAVEELLRYLAIAD 292
Query: 335 VDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSES 394
+ G A DI +G ++ G+GV + R ++ ED P+ ++ R
Sbjct: 293 IAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVY-ED-----PDALDIHRSARHHL 346
Query: 395 PYKFAAFQAGPRICPGKEFAYRQMK-ILAAVLLQFFRFKLVDETKEATYRTMFTLH 449
+ F Q C G+ A +++ IL A++ + +L ++ R T+
Sbjct: 347 AFGFGVHQ-----CLGQNLARLELEVILNALMDRVPTLRLAVPVEQLVLRPGTTIQ 397
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 204 SFIFELIRCKREQMKNVELDRGKEDILSRFLLESEKDPESMTDKYLRDITLNFIIAGKDT 263
+FI +L+ +R + + D+LS + + D ++ L I L ++AG +T
Sbjct: 194 NFILDLVERRRTEPGD--------DLLSALIRVQDDDDGRLSADELTSIALVLLLAGFET 245
Query: 264 TANTLTWFFYMLCKHP 279
+ + + Y+L HP
Sbjct: 246 SVSLIGIGTYLLLTHP 261
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 15/125 (12%)
Query: 322 ALSETLRLYPAVPVDG-KNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFR 380
A+ E LR P G A +D+ G +++ GD V Y++Y D E F
Sbjct: 277 AIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAV-YVSYLAA------NRDPEVFP 329
Query: 381 -PERWLVNGVFRSESPYKFAAFQAGPRICPGKEFAYRQMKILA-AVLLQFFRFKLVDETK 438
P+R + SP +F GP CPG A + ++L AVL + KL +
Sbjct: 330 DPDR-----IDFERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPE 384
Query: 439 EATYR 443
+ ++
Sbjct: 385 DVPFK 389
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 15/125 (12%)
Query: 322 ALSETLRLYPAVPVDG-KNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFR 380
A+ E LR P G A +D+ G +++ GD V Y++Y D E F
Sbjct: 277 AIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAV-YVSYLAA------NRDPEVFP 329
Query: 381 -PERWLVNGVFRSESPYKFAAFQAGPRICPGKEFAYRQMKILA-AVLLQFFRFKLVDETK 438
P+R + SP +F GP CPG A + ++L AVL + KL +
Sbjct: 330 DPDR-----IDFERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPE 384
Query: 439 EATYR 443
+ ++
Sbjct: 385 DVPFK 389
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 15/125 (12%)
Query: 322 ALSETLRLYPAVPVDG-KNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFR 380
A+ E LR P G A +D+ G +++ GD V Y++Y D E F
Sbjct: 277 AIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAV-YVSYLAA------NRDPEVFP 329
Query: 381 -PERWLVNGVFRSESPYKFAAFQAGPRICPGKEFAYRQMKILA-AVLLQFFRFKLVDETK 438
P+R + SP +F GP CPG A + ++L AVL + KL +
Sbjct: 330 DPDR-----IDFERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPE 384
Query: 439 EATYR 443
+ ++
Sbjct: 385 DVPFK 389
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 15/125 (12%)
Query: 322 ALSETLRLYPAVPVDG-KNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFR 380
A+ E LR P G A +D+ G +++ GD V Y++Y D E F
Sbjct: 277 AIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAV-YVSYLAA------NRDPEVFP 329
Query: 381 -PERWLVNGVFRSESPYKFAAFQAGPRICPGKEFAYRQMKILA-AVLLQFFRFKLVDETK 438
P+R + SP +F GP CPG A + ++L AVL + KL +
Sbjct: 330 DPDR-----IDFERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPE 384
Query: 439 EATYR 443
+ ++
Sbjct: 385 DVPFK 389
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 15/125 (12%)
Query: 322 ALSETLRLYPAVPVDG-KNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFR 380
A+ E LR P G A +D+ G +++ GD V Y++Y D E F
Sbjct: 277 AIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAV-YVSYLAA------NRDPEVFP 329
Query: 381 -PERWLVNGVFRSESPYKFAAFQAGPRICPGKEFAYRQMKILA-AVLLQFFRFKLVDETK 438
P+R + SP +F GP CPG A + ++L AVL + KL +
Sbjct: 330 DPDR-----IDFERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPE 384
Query: 439 EATYR 443
+ ++
Sbjct: 385 DVPFK 389
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 229 ILSRFLLESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHP 279
+LS L S++D + ++ + L + + +IAG +TT N + L HP
Sbjct: 206 LLSSLLAVSDEDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHP 256
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 15/125 (12%)
Query: 322 ALSETLRLYPAVPVDG-KNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFR 380
A+ E LR P G A +D+ G +++ GD V Y++Y D E F
Sbjct: 277 AIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAV-YVSYLAA------NRDPEVFP 329
Query: 381 -PERWLVNGVFRSESPYKFAAFQAGPRICPGKEFAYRQMKILA-AVLLQFFRFKLVDETK 438
P+R + SP +F GP CPG A + ++L AVL + KL +
Sbjct: 330 DPDR-----IDFERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPE 384
Query: 439 EATYR 443
+ ++
Sbjct: 385 DVPFK 389
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 15/125 (12%)
Query: 322 ALSETLRLYPAVPVDG-KNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFR 380
A+ E LR P G A +D+ G +++ GD V Y++Y D E F
Sbjct: 277 AIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAV-YVSYLAA------NRDPEVFP 329
Query: 381 -PERWLVNGVFRSESPYKFAAFQAGPRICPGKEFAYRQMKILA-AVLLQFFRFKLVDETK 438
P+R + SP +F GP CPG A + ++L AVL + KL +
Sbjct: 330 DPDR-----IDFERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPE 384
Query: 439 EATYR 443
+ ++
Sbjct: 385 DVPFK 389
>pdb|2XC3|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cyp125 Bound
To The Reverse Type I Inhibitor
Length = 424
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 227 EDILSRFLLESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHP 279
+DI+++ L++++ D E ++D + +AG +TT N++T +HP
Sbjct: 228 DDIVTQ-LIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHP 279
>pdb|2XN8|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp125
Length = 423
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 227 EDILSRFLLESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHP 279
+DI+++ L++++ D E ++D + +AG +TT N++T +HP
Sbjct: 227 DDIVTQ-LIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHP 278
>pdb|2X5W|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Substrate Cholest-4-En-3-One
Length = 440
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 227 EDILSRFLLESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHP 279
+DI+++ L++++ D E ++D + +AG +TT N++T +HP
Sbjct: 244 DDIVTQ-LIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHP 295
>pdb|2X5L|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp125, Alternative Crystal
Form
Length = 431
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 227 EDILSRFLLESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHP 279
+DI+++ L++++ D E ++D + +AG +TT N++T +HP
Sbjct: 235 DDIVTQ-LIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHP 286
>pdb|3IVY|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125, P212121 Crystal Form
pdb|3IW0|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125, C2221 Crystal Form
pdb|3IW1|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Androstenedione
pdb|3IW2|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Econazole
Length = 433
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 227 EDILSRFLLESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHP 279
+DI+++ L++++ D E ++D + +AG +TT N++T +HP
Sbjct: 237 DDIVTQ-LIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHP 288
>pdb|4APY|A Chain A, Ethylene Glycol-bound Form Of P450 Cyp125a3 From
Mycobacterium Smegmatis
Length = 433
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 227 EDILSRFLLESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHP 279
EDI+++ L+E++ D E ++D + +AG +TT N++T ++P
Sbjct: 220 EDIVTK-LIEADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITHGMIAFAQNP 271
>pdb|1RLR|A Chain A, Structure Of Ribonucleotide Reductase Protein R1
Length = 761
Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 262 DTTANTLT-------WFFYMLCKHPLIQEKAALD-VREATEAQGNLCADEFAKLVTEAAL 313
D +AN LT ++ + + L +E+ A E T A+G L D + K + A
Sbjct: 533 DGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIAN 592
Query: 314 EKMHYLHAALSETLRLY 330
E +HY AL E+++ +
Sbjct: 593 EPLHYDWEALRESIKTH 609
>pdb|2XAY|A Chain A, Ribonucleotide Reductase Y730no2y And C439a Modified R1
Subunit Of E. Coli
pdb|2XAY|B Chain B, Ribonucleotide Reductase Y730no2y And C439a Modified R1
Subunit Of E. Coli
pdb|2XAY|C Chain C, Ribonucleotide Reductase Y730no2y And C439a Modified R1
Subunit Of E. Coli
Length = 761
Score = 28.9 bits (63), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 262 DTTANTLT-------WFFYMLCKHPLIQEKAALD-VREATEAQGNLCADEFAKLVTEAAL 313
D +AN LT ++ + + L +E+ A E T A+G L D + K + A
Sbjct: 533 DGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIAN 592
Query: 314 EKMHYLHAALSETLRLY 330
E +HY AL E+++ +
Sbjct: 593 EPLHYDWEALRESIKTH 609
>pdb|2XAZ|A Chain A, Ribonucleotide Reductase Y730no2y And C439s Modified R1
Subunit Of E. Coli
pdb|2XAZ|B Chain B, Ribonucleotide Reductase Y730no2y And C439s Modified R1
Subunit Of E. Coli
pdb|2XAZ|C Chain C, Ribonucleotide Reductase Y730no2y And C439s Modified R1
Subunit Of E. Coli
Length = 761
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 262 DTTANTLT-------WFFYMLCKHPLIQEKAALD-VREATEAQGNLCADEFAKLVTEAAL 313
D +AN LT ++ + + L +E+ A E T A+G L D + K + A
Sbjct: 533 DGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIAN 592
Query: 314 EKMHYLHAALSETLRLY 330
E +HY AL E+++ +
Sbjct: 593 EPLHYDWEALRESIKTH 609
>pdb|4R1R|A Chain A, Ribonucleotide Reductase R1 Protein With Substrate, Gdp
And Effector Dttp From Escherichia Coli
pdb|4R1R|B Chain B, Ribonucleotide Reductase R1 Protein With Substrate, Gdp
And Effector Dttp From Escherichia Coli
pdb|4R1R|C Chain C, Ribonucleotide Reductase R1 Protein With Substrate, Gdp
And Effector Dttp From Escherichia Coli
Length = 761
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 262 DTTANTLT-------WFFYMLCKHPLIQEKAALD-VREATEAQGNLCADEFAKLVTEAAL 313
D +AN LT ++ + + L +E+ A E T A+G L D + K + A
Sbjct: 533 DGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIAN 592
Query: 314 EKMHYLHAALSETLRLY 330
E +HY AL E+++ +
Sbjct: 593 EPLHYDWEALRESIKTH 609
>pdb|2XAX|A Chain A, Ribonucleotide Reductase Y730no2y And Y731a Modified R1
Subunit Of E. Coli
pdb|2XAX|B Chain B, Ribonucleotide Reductase Y730no2y And Y731a Modified R1
Subunit Of E. Coli
pdb|2XAX|C Chain C, Ribonucleotide Reductase Y730no2y And Y731a Modified R1
Subunit Of E. Coli
Length = 761
Score = 28.5 bits (62), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 262 DTTANTLT-------WFFYMLCKHPLIQEKAALD-VREATEAQGNLCADEFAKLVTEAAL 313
D +AN LT ++ + + L +E+ A E T A+G L D + K + A
Sbjct: 533 DGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIAN 592
Query: 314 EKMHYLHAALSETLRLY 330
E +HY AL E+++ +
Sbjct: 593 EPLHYDWEALRESIKTH 609
>pdb|1R1R|A Chain A, Ribonucleotide Reductase R1 Protein Mutant Y730f With A
Reduced Active Site From Escherichia Coli
pdb|1R1R|B Chain B, Ribonucleotide Reductase R1 Protein Mutant Y730f With A
Reduced Active Site From Escherichia Coli
pdb|1R1R|C Chain C, Ribonucleotide Reductase R1 Protein Mutant Y730f With A
Reduced Active Site From Escherichia Coli
Length = 761
Score = 28.5 bits (62), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 262 DTTANTLT-------WFFYMLCKHPLIQEKAALD-VREATEAQGNLCADEFAKLVTEAAL 313
D +AN LT ++ + + L +E+ A E T A+G L D + K + A
Sbjct: 533 DGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIAN 592
Query: 314 EKMHYLHAALSETLRLY 330
E +HY AL E+++ +
Sbjct: 593 EPLHYDWEALRESIKTH 609
>pdb|6R1R|A Chain A, Ribonucleotide Reductase E441d Mutant R1 Protein From
Escherichia Coli
pdb|6R1R|B Chain B, Ribonucleotide Reductase E441d Mutant R1 Protein From
Escherichia Coli
pdb|6R1R|C Chain C, Ribonucleotide Reductase E441d Mutant R1 Protein From
Escherichia Coli
Length = 761
Score = 28.5 bits (62), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 262 DTTANTLT-------WFFYMLCKHPLIQEKAALD-VREATEAQGNLCADEFAKLVTEAAL 313
D +AN LT ++ + + L +E+ A E T A+G L D + K + A
Sbjct: 533 DGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIAN 592
Query: 314 EKMHYLHAALSETLRLY 330
E +HY AL E+++ +
Sbjct: 593 EPLHYDWEALRESIKTH 609
>pdb|7R1R|A Chain A, Ribonucleotide Reductase E441q Mutant R1 Protein From
Escherichia Coli
pdb|7R1R|B Chain B, Ribonucleotide Reductase E441q Mutant R1 Protein From
Escherichia Coli
pdb|7R1R|C Chain C, Ribonucleotide Reductase E441q Mutant R1 Protein From
Escherichia Coli
Length = 761
Score = 28.5 bits (62), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 262 DTTANTLT-------WFFYMLCKHPLIQEKAALD-VREATEAQGNLCADEFAKLVTEAAL 313
D +AN LT ++ + + L +E+ A E T A+G L D + K + A
Sbjct: 533 DGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIAN 592
Query: 314 EKMHYLHAALSETLRLY 330
E +HY AL E+++ +
Sbjct: 593 EPLHYDWEALRESIKTH 609
>pdb|2XAP|A Chain A, Ribonucleotide Reductase Y731no2y Modified R1 Subunit Of
E. Coli To 2.1 A Resolution
pdb|2XAP|B Chain B, Ribonucleotide Reductase Y731no2y Modified R1 Subunit Of
E. Coli To 2.1 A Resolution
pdb|2XAP|C Chain C, Ribonucleotide Reductase Y731no2y Modified R1 Subunit Of
E. Coli To 2.1 A Resolution
pdb|2XO5|A Chain A, Ribonucleotide Reductase Y731nh2y Modified R1 Subunit Of
E. Coli
pdb|2XO5|B Chain B, Ribonucleotide Reductase Y731nh2y Modified R1 Subunit Of
E. Coli
pdb|2XO5|C Chain C, Ribonucleotide Reductase Y731nh2y Modified R1 Subunit Of
E. Coli
Length = 761
Score = 28.5 bits (62), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 262 DTTANTLT-------WFFYMLCKHPLIQEKAALD-VREATEAQGNLCADEFAKLVTEAAL 313
D +AN LT ++ + + L +E+ A E T A+G L D + K + A
Sbjct: 533 DGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIAN 592
Query: 314 EKMHYLHAALSETLRLY 330
E +HY AL E+++ +
Sbjct: 593 EPLHYDWEALRESIKTH 609
>pdb|2XAK|A Chain A, Ribonucleotide Reductase Y730no2y Modified R1 Subunit Of
E. Coli
pdb|2XAK|B Chain B, Ribonucleotide Reductase Y730no2y Modified R1 Subunit Of
E. Coli
pdb|2XAK|C Chain C, Ribonucleotide Reductase Y730no2y Modified R1 Subunit Of
E. Coli
pdb|2XO4|A Chain A, Ribonucleotide Reductase Y730nh2y Modified R1 Subunit Of
E. Coli
pdb|2XO4|B Chain B, Ribonucleotide Reductase Y730nh2y Modified R1 Subunit Of
E. Coli
pdb|2XO4|C Chain C, Ribonucleotide Reductase Y730nh2y Modified R1 Subunit Of
E. Coli
Length = 761
Score = 28.5 bits (62), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 262 DTTANTLT-------WFFYMLCKHPLIQEKAALD-VREATEAQGNLCADEFAKLVTEAAL 313
D +AN LT ++ + + L +E+ A E T A+G L D + K + A
Sbjct: 533 DGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIAN 592
Query: 314 EKMHYLHAALSETLRLY 330
E +HY AL E+++ +
Sbjct: 593 EPLHYDWEALRESIKTH 609
>pdb|3R1R|A Chain A, Ribonucleotide Reductase R1 Protein With Amppnp Occupying
The Activity Site From Escherichia Coli
pdb|3R1R|B Chain B, Ribonucleotide Reductase R1 Protein With Amppnp Occupying
The Activity Site From Escherichia Coli
pdb|3R1R|C Chain C, Ribonucleotide Reductase R1 Protein With Amppnp Occupying
The Activity Site From Escherichia Coli
pdb|2R1R|A Chain A, Ribonucleotide Reductase R1 Protein With Dttp Occupying
The Specificity Site From Escherichia Coli
pdb|2R1R|B Chain B, Ribonucleotide Reductase R1 Protein With Dttp Occupying
The Specificity Site From Escherichia Coli
pdb|2R1R|C Chain C, Ribonucleotide Reductase R1 Protein With Dttp Occupying
The Specificity Site From Escherichia Coli
pdb|2X0X|A Chain A, Ribonucleotide Reductase R1 Subunit Of E. Coli To 2.3 A
Resolution
pdb|2X0X|B Chain B, Ribonucleotide Reductase R1 Subunit Of E. Coli To 2.3 A
Resolution
pdb|2X0X|C Chain C, Ribonucleotide Reductase R1 Subunit Of E. Coli To 2.3 A
Resolution
pdb|3UUS|A Chain A, Crystal Structure Of The Datp Inhibited E. Coli Class Ia
Ribonucleotide Reductase Complex
pdb|3UUS|B Chain B, Crystal Structure Of The Datp Inhibited E. Coli Class Ia
Ribonucleotide Reductase Complex
pdb|3UUS|C Chain C, Crystal Structure Of The Datp Inhibited E. Coli Class Ia
Ribonucleotide Reductase Complex
pdb|3UUS|D Chain D, Crystal Structure Of The Datp Inhibited E. Coli Class Ia
Ribonucleotide Reductase Complex
pdb|4ERM|A Chain A, Crystal Structure Of The Datp Inhibited E. Coli Class Ia
Ribonucleotide Reductase Complex At 4 Angstroms
Resolution
pdb|4ERM|B Chain B, Crystal Structure Of The Datp Inhibited E. Coli Class Ia
Ribonucleotide Reductase Complex At 4 Angstroms
Resolution
pdb|4ERM|C Chain C, Crystal Structure Of The Datp Inhibited E. Coli Class Ia
Ribonucleotide Reductase Complex At 4 Angstroms
Resolution
pdb|4ERM|D Chain D, Crystal Structure Of The Datp Inhibited E. Coli Class Ia
Ribonucleotide Reductase Complex At 4 Angstroms
Resolution
pdb|4ERP|A Chain A, Crystal Structure Of A Gemcitabine-Diphosphate Inhibited
E. Coli Class Ia Ribonucleotide Reductase Complex
pdb|4ERP|B Chain B, Crystal Structure Of A Gemcitabine-Diphosphate Inhibited
E. Coli Class Ia Ribonucleotide Reductase Complex
pdb|4ERP|C Chain C, Crystal Structure Of A Gemcitabine-Diphosphate Inhibited
E. Coli Class Ia Ribonucleotide Reductase Complex
pdb|4ERP|D Chain D, Crystal Structure Of A Gemcitabine-Diphosphate Inhibited
E. Coli Class Ia Ribonucleotide Reductase Complex
Length = 761
Score = 28.5 bits (62), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 262 DTTANTLT-------WFFYMLCKHPLIQEKAALD-VREATEAQGNLCADEFAKLVTEAAL 313
D +AN LT ++ + + L +E+ A E T A+G L D + K + A
Sbjct: 533 DGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIAN 592
Query: 314 EKMHYLHAALSETLRLY 330
E +HY AL E+++ +
Sbjct: 593 EPLHYDWEALRESIKTH 609
>pdb|2XAW|A Chain A, Ribonucleotide Reductase Y730no2y And Y731f Modified R1
Subunit Of E. Coli
pdb|2XAW|B Chain B, Ribonucleotide Reductase Y730no2y And Y731f Modified R1
Subunit Of E. Coli
pdb|2XAW|C Chain C, Ribonucleotide Reductase Y730no2y And Y731f Modified R1
Subunit Of E. Coli
Length = 761
Score = 28.5 bits (62), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 262 DTTANTLT-------WFFYMLCKHPLIQEKAALD-VREATEAQGNLCADEFAKLVTEAAL 313
D +AN LT ++ + + L +E+ A E T A+G L D + K + A
Sbjct: 533 DGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIAN 592
Query: 314 EKMHYLHAALSETLRLY 330
E +HY AL E+++ +
Sbjct: 593 EPLHYDWEALRESIKTH 609
>pdb|2XAV|A Chain A, Ribonucleotide Reductase Y731no2y And Y730f Modified R1
Subunit Of E. Coli
pdb|2XAV|B Chain B, Ribonucleotide Reductase Y731no2y And Y730f Modified R1
Subunit Of E. Coli
pdb|2XAV|C Chain C, Ribonucleotide Reductase Y731no2y And Y730f Modified R1
Subunit Of E. Coli
Length = 761
Score = 28.5 bits (62), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 262 DTTANTLT-------WFFYMLCKHPLIQEKAALD-VREATEAQGNLCADEFAKLVTEAAL 313
D +AN LT ++ + + L +E+ A E T A+G L D + K + A
Sbjct: 533 DGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIAN 592
Query: 314 EKMHYLHAALSETLRLY 330
E +HY AL E+++ +
Sbjct: 593 EPLHYDWEALRESIKTH 609
>pdb|5R1R|A Chain A, Ribonucleotide Reductase E441a Mutant R1 Protein From
Escherichia Coli
pdb|5R1R|B Chain B, Ribonucleotide Reductase E441a Mutant R1 Protein From
Escherichia Coli
pdb|5R1R|C Chain C, Ribonucleotide Reductase E441a Mutant R1 Protein From
Escherichia Coli
Length = 761
Score = 28.5 bits (62), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 262 DTTANTLT-------WFFYMLCKHPLIQEKAALD-VREATEAQGNLCADEFAKLVTEAAL 313
D +AN LT ++ + + L +E+ A E T A+G L D + K + A
Sbjct: 533 DGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIAN 592
Query: 314 EKMHYLHAALSETLRLY 330
E +HY AL E+++ +
Sbjct: 593 EPLHYDWEALRESIKTH 609
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.138 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,275,476
Number of Sequences: 62578
Number of extensions: 560919
Number of successful extensions: 1565
Number of sequences better than 100.0: 161
Number of HSP's better than 100.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 1303
Number of HSP's gapped (non-prelim): 168
length of query: 461
length of database: 14,973,337
effective HSP length: 102
effective length of query: 359
effective length of database: 8,590,381
effective search space: 3083946779
effective search space used: 3083946779
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 53 (25.0 bits)