Query         012536
Match_columns 461
No_of_seqs    177 out of 2043
Neff          11.2
Searched_HMMs 29240
Date          Mon Mar 25 11:21:16 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012536.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012536hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3ld6_A Lanosterol 14-alpha dem 100.0   1E-73 3.4E-78  548.4  28.5  428    2-461    24-453 (461)
  2 3k9v_A 1,25-dihydroxyvitamin D 100.0 8.4E-72 2.9E-76  539.3  38.2  428    8-461    47-482 (482)
  3 3mdm_A Cholesterol 24-hydroxyl 100.0 2.2E-71 7.4E-76  532.1  38.7  424    8-461     9-441 (456)
  4 3n9y_A Cholesterol SIDE-chain  100.0 3.7E-71 1.3E-75  535.2  38.5  432    8-461    31-474 (487)
  5 3nxu_A Cytochrome P450 3A4; al 100.0 8.3E-72 2.8E-76  539.4  33.7  435    2-461    26-474 (485)
  6 3pm0_A Cypib1, cytochrome P450 100.0 1.7E-71 5.9E-76  540.4  24.9  441    2-461    21-483 (507)
  7 2fdv_A Cytochrome P450 2A6; CY 100.0 3.7E-70 1.3E-74  525.8  33.1  430    8-461    29-472 (476)
  8 2ve3_A Putative cytochrome P45 100.0 3.8E-70 1.3E-74  520.5  32.4  417    3-461    25-443 (444)
  9 3tbg_A Cytochrome P450 2D6; mo 100.0 1.7E-69 5.7E-74  522.8  33.0  433    8-461    29-475 (479)
 10 2ij2_A Cytochrome P450 BM3; mo 100.0 4.7E-69 1.6E-73  516.5  35.9  423    9-461    23-451 (470)
 11 3e6i_A CYPIIE1, P450-J, cytoch 100.0 1.5E-69 5.1E-74  522.6  32.6  435    2-461    22-471 (476)
 12 3swz_A Steroid 17-alpha-hydrox 100.0 4.8E-70 1.7E-74  527.9  29.1  430    9-461    29-478 (494)
 13 2cib_A Cytochrome P450 51; hem 100.0 7.4E-70 2.5E-74  520.2  29.0  428    3-461    18-448 (455)
 14 1po5_A Cytochrome P450 2B4; ox 100.0 1.1E-69 3.9E-74  522.4  30.2  434    3-461    23-472 (476)
 15 3qz1_A Steroid 21-hydroxylase; 100.0 2.9E-70 9.9E-75  530.1  24.8  427    8-461    42-483 (496)
 16 3czh_A Cytochrome P450 2R1; vi 100.0 4.7E-69 1.6E-73  518.3  31.0  427   11-461    36-475 (481)
 17 1r9o_A Cytochrome P450 2C9; mo 100.0   2E-69 6.7E-74  521.1  28.3  429    8-461    30-473 (477)
 18 3gw9_A Sterol 14alpha-demethyl 100.0 4.4E-69 1.5E-73  515.7  28.3  425    2-461    16-449 (450)
 19 2hi4_A Cytochrome P450 1A2; CY 100.0 1.2E-69 4.1E-74  524.6  23.7  436    4-461    30-487 (495)
 20 3s79_A Cytochrome P450 19A1; o 100.0 1.4E-67 4.7E-72  512.3  38.0  417   10-461    69-495 (503)
 21 3i3k_A Lanosterol 14-alpha dem 100.0 2.8E-68 9.5E-73  511.1  28.4  425    2-457    24-450 (461)
 22 3dbg_A Putative cytochrome P45 100.0 1.7E-68 5.8E-73  513.0  24.0  420    2-457    35-457 (467)
 23 3dax_A Cytochrome P450 7A1; ch 100.0 1.6E-63 5.3E-68  482.3  29.1  437    2-460    26-484 (491)
 24 1n97_A CYP175A1; electron tran 100.0 6.2E-64 2.1E-68  468.8  24.0  373    4-461    13-386 (389)
 25 3v8d_A Cholesterol 7-alpha-mon 100.0 2.7E-63 9.2E-68  480.1  26.3  437    1-459    25-483 (491)
 26 1izo_A P450bsbeta, cytochrome  100.0 3.9E-61 1.3E-65  454.6  33.7  396    2-461    12-415 (417)
 27 3b6h_A Prostacyclin synthase;  100.0 2.3E-61 7.9E-66  467.6  32.8  438    3-461    32-489 (498)
 28 3a4g_A Vitamin D hydroxylase;  100.0 3.5E-61 1.2E-65  452.3  28.3  374    7-461    18-401 (411)
 29 1cpt_A Cytochrome P450-TERP; o 100.0 8.6E-61 2.9E-65  453.0  30.5  387    9-461    25-428 (428)
 30 2cd8_A Cytochrome P450 monooxy 100.0 3.4E-61 1.2E-65  456.0  26.3  375    8-461    45-428 (436)
 31 3awm_A Fatty acid alpha-hydrox 100.0 3.5E-60 1.2E-64  447.8  32.7  395    2-461    11-413 (415)
 32 3ejb_B Biotin biosynthesis cyt 100.0 9.3E-61 3.2E-65  450.1  28.6  378    7-461    11-396 (404)
 33 1gwi_A CYP154C1, cytochrome P4 100.0 2.3E-61 7.9E-66  453.9  24.4  378    6-461    14-409 (411)
 34 3buj_A CALO2; heme, iron, meta 100.0 8.6E-61 2.9E-65  448.8  27.6  375    8-461    12-396 (397)
 35 2dkk_A Cytochrome P450; CYP158 100.0 2.8E-61 9.5E-66  452.7  23.9  375    5-461    23-410 (411)
 36 3aba_A Cytochrome P450; oxidor 100.0 4.5E-61 1.5E-65  451.0  25.1  374    8-461    18-402 (403)
 37 1odo_A Putative cytochrome P45 100.0 1.9E-60 6.6E-65  447.7  28.8  377    7-460    13-407 (408)
 38 2jjn_A Cytochrome P450 113A1;  100.0 1.9E-60 6.6E-65  448.2  27.5  376    8-461    27-406 (411)
 39 1ued_A P450 OXYC, P450 monooxy 100.0 2.8E-60 9.6E-65  446.1  27.6  369    7-458    22-406 (406)
 40 4fb2_A P450CIN; heme, monooxyg 100.0 1.5E-60 5.2E-65  447.2  25.5  371    7-461    17-393 (398)
 41 2uuq_A CYP130, cytochrome P450 100.0 9.5E-61 3.3E-65  449.8  24.2  374    8-461    24-413 (414)
 42 2xkr_A CYP142, putative cytoch 100.0 4.9E-60 1.7E-64  443.8  28.7  375    8-461    17-394 (398)
 43 3b98_A Prostaglandin I2 syntha 100.0 1.2E-60 4.1E-65  460.2  24.9  418    2-461    31-470 (475)
 44 1z8o_A 6-deoxyerythronolide B  100.0   3E-60   1E-64  445.9  26.8  371    8-458    13-402 (404)
 45 2y5n_A MYCG, P-450-like protei 100.0 5.9E-60   2E-64  444.5  28.0  371    8-457    36-416 (417)
 46 2z3t_A Cytochrome P450; monoxy 100.0 3.2E-60 1.1E-64  447.8  24.1  377    8-460    19-415 (425)
 47 3nc3_A Cytochrome P450 CYPX; c 100.0 1.5E-60 5.1E-65  451.9  20.1  386    7-460    51-440 (441)
 48 3abb_A CYP105D6, cytochrome P4 100.0 1.8E-60 6.2E-65  448.0  20.5  374    7-461    22-407 (408)
 49 1q5d_A P450 epoxidase; cytochr 100.0 1.1E-59 3.7E-64  444.0  25.5  377    8-461    25-416 (419)
 50 2xbk_A PIMD protein; epoxidati 100.0 3.3E-59 1.1E-63  437.2  27.4  364    8-457    25-403 (404)
 51 2wm5_A CYP124, putative cytoch 100.0 5.6E-59 1.9E-63  440.3  29.0  356    9-435    44-414 (435)
 52 1jfb_A Nitric-oxide reductase  100.0 8.5E-59 2.9E-63  436.7  29.9  357    8-436    16-382 (404)
 53 2zbx_A Cytochrome P450-SU1; be 100.0 5.3E-59 1.8E-63  438.2  28.3  370    7-457    22-405 (412)
 54 3tyw_A Putative cytochrome P45 100.0   5E-59 1.7E-63  439.4  28.0  357    7-442    27-395 (417)
 55 1lfk_A OXYB, P450 monooxygenas 100.0 1.9E-59 6.6E-64  439.5  24.1  375    2-457     6-397 (398)
 56 2z36_A MOXA, cytochrome P450 t 100.0 1.5E-59 5.1E-64  441.6  23.4  372    7-458    20-407 (413)
 57 2zwu_A Camphor 5-monooxygenase 100.0 1.3E-59 4.4E-64  441.9  22.8  368    8-461    36-410 (415)
 58 3tkt_A Cytochrome P450; aromat 100.0 5.7E-59 1.9E-63  442.6  27.1  383    9-460    45-449 (450)
 59 3lxh_A Cytochrome P450; heme,  100.0 6.6E-59 2.3E-63  439.2  25.1  377    7-461    36-417 (421)
 60 1s1f_A Putative cytochrome P45 100.0 6.3E-59 2.2E-63  436.9  24.1  370    7-458    22-404 (406)
 61 3mgx_A Putative P450 monooxyge 100.0 3.6E-59 1.2E-63  438.6  22.2  369    9-461    37-415 (415)
 62 3oo3_A OXY protein; cytochrome 100.0 2.4E-58 8.1E-63  430.7  26.5  366    6-457     9-383 (384)
 63 3oft_A Cytochrome P450, CYP101 100.0 1.5E-58 5.2E-63  433.8  24.5  349    8-437    23-375 (396)
 64 3ivy_A Cytochrome P450 CYP125; 100.0 4.9E-59 1.7E-63  441.1  21.0  371    9-461    37-428 (433)
 65 3r9b_A Cytochrome P450 164A2;  100.0 3.4E-58 1.2E-62  434.7  24.7  379    7-461    27-417 (418)
 66 3rwl_A Cytochrome P450 alkane  100.0   2E-57 6.7E-62  428.6  29.2  376    9-460    38-426 (426)
 67 1n40_A P450 MT2, cytochrome P4 100.0 2.6E-58   9E-63  431.2  20.1  368    7-457    14-395 (396)
 68 1io7_A Cytochrome P450 CYP119; 100.0 1.7E-56 5.7E-61  415.1  26.7  354   11-461     1-367 (368)
 69 2wiy_A XPLA-heme, cytochrome P 100.0 4.3E-56 1.5E-60  415.7  27.1  352    8-435    19-373 (394)
 70 3b4x_A 367AA long hypothetical 100.0 2.6E-56 8.9E-61  413.1  22.3  352   11-460     1-366 (367)
 71 3p3o_A Cytochrome P450; monoox 100.0 9.2E-56 3.1E-60  416.5  23.5  373    7-460    31-415 (416)
 72 2rfb_A Cytochrome P450; heme,  100.0 1.1E-55 3.6E-60  405.6  17.5  320   20-436     2-324 (343)
 73 3dsk_A Cytochrome P450 74A, ch 100.0   2E-55   7E-60  425.6  19.8  387    8-435    51-471 (495)
 74 3dan_A Cytochrome P450 74A2; A 100.0 4.3E-54 1.5E-58  414.2  27.9  376   10-436    35-454 (473)
 75 4dnj_A Putative cytochrome P45 100.0 7.9E-54 2.7E-58  402.2  25.6  373    7-460    32-411 (412)
 76 4dxy_A Cytochrome P450, CYP101 100.0 1.5E-49   5E-54  372.2  23.2  373    8-458    36-413 (417)
 77 2yjn_B Erycii, DTDP-4-keto-6-d 100.0 1.5E-45 5.3E-50  337.1   3.8  294    8-436    58-361 (381)
 78 1m46_B IQ4, IQ4 motif from MYO  53.9      11 0.00038   17.6   2.0   13  280-292     8-20  (26)
 79 1use_A VAsp, vasodilator-stimu  22.4 1.2E+02   0.004   17.3   3.6   14  279-292    14-27  (45)
 80 2rqw_B 24-meric peptide from s  21.7      33  0.0011   16.7   0.8    9  376-384     5-13  (26)
 81 1nrj_A Signal recognition part  20.5      24 0.00081   26.1   0.2   23  406-428    18-40  (158)

No 1  
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00  E-value=1e-73  Score=548.40  Aligned_cols=428  Identities=18%  Similarity=0.318  Sum_probs=351.4

Q ss_pred             cccccchhhhhHHHHHHHHhcCc-EEEecCCCCeEEecChhhHHhhhhcCccccCCChhhHHHhHhhccCce-eeeCChh
Q 012536            2 LNLLIHFSRLFDYQTSLAKKYRT-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWNLMRDLFGDGI-FAVDGDK   79 (461)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~yg~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~g~~l-~~~~~~~   79 (461)
                      ++++...++++.++.+++++||+ |++.++++++|+|+||+++++++..+...|.+++.+.......+|.++ +..+++.
T Consensus        24 G~~~~~~~~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  103 (461)
T 3ld6_A           24 GHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTPVFGKGVAYDVPNPV  103 (461)
T ss_dssp             BTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHHHHHCTTSGGGSCHHH
T ss_pred             eeHHHhhhCHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhhhccCCCccccCCCcHH
Confidence            45666778999999999999985 889999999999999999999999887788888877767777788776 4578999


Q ss_pred             HHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHHHHHHhHhhhhhccCCCCCCCCCCCccc
Q 012536           80 WRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGN  159 (461)
Q Consensus        80 ~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~  159 (461)
                      |+++|++++++|+.+.++.+.+ .+.+.++.+++.+.    ++..+|+.+.+..+++++++.++||.+++...  .   .
T Consensus       104 ~~~~R~~~~~~f~~~~l~~~~~-~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~fG~~~~~~~--~---~  173 (461)
T 3ld6_A          104 FLEQKKMLKSGLNIAHFKQHVS-IIEKETKEYFESWG----ESGEKNVFEALSELIILTASHCLHGKEIRSQL--N---E  173 (461)
T ss_dssp             HHHHHHHHHHHSSHHHHHHHHH-HHHHHHHHHGGGGC----SEEEEEHHHHHHHHHHHHHHHHHTCHHHHHTC--C---H
T ss_pred             HHHHHHhccccccHHHHhhhhH-HHHHHHHHHHHHHh----hcCCccHHHHHHHHHHHHHHHHHcCcchhhhh--h---h
Confidence            9999999999999999999885 66777777766553    34578999999999999999999998765422  1   2


Q ss_pred             hHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccCC
Q 012536          160 QFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEK  239 (461)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~~  239 (461)
                      .+.+.+....    ..+....+.+..+++.+...+..++.+.+.+++.+.+++++...+      ..+|+++.|+++..+
T Consensus       174 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~------~~~d~l~~ll~~~~~  243 (461)
T 3ld6_A          174 KVAQLYADLD----GGFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQSQE------KIDDILQTLLDATYK  243 (461)
T ss_dssp             HHHHHHHHHH----TTSSHHHHHSCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCC------CCCSHHHHHHTCBCT
T ss_pred             hhhhhhhhhh----hhhhhHHHhhhhhccCcHHHHHHHHHHHHHHHHHHHHHHHHhcCC------CCcchhhhhHHhhhc
Confidence            2222222111    111112223444555566667778888888999888888765432      457899999998877


Q ss_pred             CCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcChHH
Q 012536          240 DPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYL  319 (461)
Q Consensus       240 ~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l  319 (461)
                      ++..++++++++++..+++||+|||+.+++|++++|+.||++|++||+|++++++....        .++.+++++||||
T Consensus       244 ~~~~ls~~ei~~~~~~~~~aG~dTt~~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~--------~~~~~~l~~lpyl  315 (461)
T 3ld6_A          244 DGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLP--------PLTYDQLKDLNLL  315 (461)
T ss_dssp             TSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTCC--------CCCHHHHHTCHHH
T ss_pred             ccCCCCHHHHHHHHHhhhhcccccccccchhhhcccccChHHHHHHHHHHHHHhccccc--------chhHHHHHHHhhh
Confidence            77789999999999999999999999999999999999999999999999999976542        3588999999999


Q ss_pred             HHHHHHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCccc
Q 012536          320 HAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFA  399 (461)
Q Consensus       320 ~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~  399 (461)
                      +|||+|++|++|+++...|++.+|+++ +||.|||||.|.++.+++||||++| +||++|+||||++++.. ...+..|+
T Consensus       316 ~avi~E~lRl~p~~~~~~r~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d~~~~-~dP~~F~PeRfl~~~~~-~~~~~~~~  392 (461)
T 3ld6_A          316 DRCIKETLRLRPPIMIMMRMARTPQTV-AGYTIPPGHQVCVSPTVNQRLKDSW-VERLDFNPDRYLQDNPA-SGEKFAYV  392 (461)
T ss_dssp             HHHHHHHHHHSCSCCCEEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTC-TTTTSCCGGGGGSCCHH-HHSSSSSC
T ss_pred             hheeeeccccCCchhccccccccceee-CCcccCCCCeeeechHhhcCCcccc-CCccccCccccCCCCcc-cCCCCccc
Confidence            999999999999999999999888877 9999999999999999999999999 99999999999974321 12356799


Q ss_pred             ccCCCCCCCCChHHHHHHHHHHHHHhccceEEEeecCCCccceeeeEEEeeCCceeeEEeeC
Q 012536          400 AFQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETKEATYRTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       400 ~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  461 (461)
                      |||+|+|+|+|++||++|++++++.||++|||+++++..+.......+. ++.++.|++++|
T Consensus       393 pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~l~~~~~~~~~~~~~~~-~p~~~~v~~~~R  453 (461)
T 3ld6_A          393 PFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTTMIH-TPENPVIRYKRR  453 (461)
T ss_dssp             TTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCBCCSSSSC-CBSSCEEEEEEC
T ss_pred             cCCCcCcCChhHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcccccceEE-cCCceEEEEEEC
Confidence            9999999999999999999999999999999999876433222233333 445788999998


No 2  
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00  E-value=8.4e-72  Score=539.25  Aligned_cols=428  Identities=21%  Similarity=0.296  Sum_probs=350.1

Q ss_pred             hhhhhHHHHHHHHhcCc-EEEecCCCCeEEecChhhHHhhhhcCccccCCChhhHH--HhHhh--ccCceeeeCChhHHH
Q 012536            8 FSRLFDYQTSLAKKYRT-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWN--LMRDL--FGDGIFAVDGDKWRH   82 (461)
Q Consensus         8 ~~~~~~~~~~~~~~yg~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~--~~~~~--~g~~l~~~~~~~~~~   82 (461)
                      .++++.++.+|+++||+ |++++|+.++|+++||+++++|+.++ ..|.+++....  .....  .+.++++.+|+.|++
T Consensus        47 ~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~~~~r~~~~~~~~~~~~~~~~~~l~~~~g~~w~~  125 (482)
T 3k9v_A           47 LKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTE-SAHPQRLEIKPWKAYRDHRNEAYGLMILEGQEWQR  125 (482)
T ss_dssp             GGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTC-CSSCCCCCCHHHHHHHHHHTCCCCTTTCCHHHHHH
T ss_pred             cccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHhc-CCCCCCCCchHHHHHHHhcCCCCCceeCCCchHHH
Confidence            35789999999999985 88889999999999999999999986 67877653221  12222  357889999999999


Q ss_pred             HHhhhcccC-CHHHHHHhHHHHHHHHHHHHHHHHHHhcc-cCCceeHHHhHHHHHHhHhhhhhccCCCCCCCCCC-Cccc
Q 012536           83 QRKLASYEF-STKILRDFSSAVFRANAEKLTSKFSVAAA-AKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSD-DFGN  159 (461)
Q Consensus        83 ~R~~~~~~f-s~~~l~~~~~~~~~~~~~~l~~~l~~~~~-~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~-~~~~  159 (461)
                      +|+.+++.| +++.++.+.+ .+++.++.+++.+.+... .++++|+.+++..+++|+++.++||.+++..++.. ....
T Consensus       126 ~Rr~~~~~f~~~~~~~~~~~-~i~~~~~~l~~~l~~~~~~~g~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~  204 (482)
T 3k9v_A          126 VRSAFQKKLMKPVEIMKLDK-KINEVLADFLERMDELCDERGRIPDLYSELNKWSFESICLVLYEKRFGLLQKETEEEAL  204 (482)
T ss_dssp             HHHHHHHHHTCHHHHGGGHH-HHHHHHHHHHHHHHHHCCTTSCCTTHHHHHHHHHHHHHHHHHHSCCCCSSSTTSTTSSH
T ss_pred             HHHHhhHHhcChHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHcccccCCCCCCcchHHH
Confidence            999999985 8888988885 778899999999987543 45689999999999999999999999997654322 2335


Q ss_pred             hHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccCC
Q 012536          160 QFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEK  239 (461)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~~  239 (461)
                      ++.+.+.............+ +.+..+++...++...+..+.+.+++.+.++++++....+    ...|++..++...  
T Consensus       205 ~~~~~~~~~~~~~~~~~~~p-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~----~~~d~l~~ll~~~--  277 (482)
T 3k9v_A          205 TFITAIKTMMSTFGKMMVTP-VELHKRLNTKVWQAHTLAWDTIFKSVKPCIDNRLQRYSQQ----PGADFLCDIYQQD--  277 (482)
T ss_dssp             HHHHHHHHHHTTGGGGSSSC-HHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC----TTSCHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHHHHHHhhh-HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC----CchHHHHHHHhcc--
Confidence            56666555443322222222 2244445545566677777888888888999887654321    3357888887652  


Q ss_pred             CCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcChHH
Q 012536          240 DPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYL  319 (461)
Q Consensus       240 ~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l  319 (461)
                         .++++++.+++..+++||+|||+.+++|++++|++||++|+|+++||+++++...         .++.+++.+||||
T Consensus       278 ---~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~---------~~~~~~l~~lpyl  345 (482)
T 3k9v_A          278 ---HLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQ---------TPRAEDLRNMPYL  345 (482)
T ss_dssp             ---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCTTC---------CCCGGGGGGCHHH
T ss_pred             ---CCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCC---------CCCHHHHhhCHHH
Confidence               4899999999999999999999999999999999999999999999999997653         2588999999999


Q ss_pred             HHHHHHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCccc
Q 012536          320 HAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFA  399 (461)
Q Consensus       320 ~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~  399 (461)
                      +|||+|++|++|+++...|.+.+|.++ +||.|||||.|.++.+++||||++| +||++|+||||++++.  ......++
T Consensus       346 ~avi~E~lRl~p~~~~~~r~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d~~~~-~~p~~F~PeRfl~~~~--~~~~~~~~  421 (482)
T 3k9v_A          346 KACLKESMRLTPSVPFTTRTLDKPTVL-GEYALPKGTVLTLNTQVLGSSEDNF-EDSHKFRPERWLQKEK--KINPFAHL  421 (482)
T ss_dssp             HHHHHHHHHHSCSCCEEEEECSSCEEE-TTEEECTTCEEEEECSGGGGCTTTC-SSTTSCCGGGGTCTTS--CCCGGGCC
T ss_pred             HHHHHHHhhcCCCCcCcccccCCceee-CCEEECCCCEEEEccccccCCCccC-CCcCccCccccCCCCC--CCCCcccc
Confidence            999999999999999888888888777 9999999999999999999999999 9999999999997432  23467899


Q ss_pred             ccCCCCCCCCChHHHHHHHHHHHHHhccceEEEeecCCCccceeeeEEEeeCCceeeEEeeC
Q 012536          400 AFQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETKEATYRTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       400 ~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  461 (461)
                      |||+|+|.|+|++||++|++++++.|+++|+|++.++. ++......++.|..++++++++|
T Consensus       422 pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~R  482 (482)
T 3k9v_A          422 PFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNE-PVEMLHLGILVPSRELPIAFRPR  482 (482)
T ss_dssp             TTCCSTTSCSCHHHHHHHHHHHHHHHHHHEEEEESCCC-CCCEEESSSEEESSSCCEEEEEC
T ss_pred             CCCCCCcCCccHHHHHHHHHHHHHHHHHhcEEeccCCC-CcccccceeecCCCCcceEEeeC
Confidence            99999999999999999999999999999999987653 55556567788999999999998


No 3  
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=100.00  E-value=2.2e-71  Score=532.09  Aligned_cols=424  Identities=26%  Similarity=0.413  Sum_probs=344.1

Q ss_pred             hhhhhHHHHHHHHhcCc-EEEecCCCCeEEecChhhHHhhhhcCccccCCChhhHHHhHh-----hccCceee-eCChhH
Q 012536            8 FSRLFDYQTSLAKKYRT-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWNLMRD-----LFGDGIFA-VDGDKW   80 (461)
Q Consensus         8 ~~~~~~~~~~~~~~yg~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~~~~~-----~~g~~l~~-~~~~~~   80 (461)
                      .+.+|+.+.+|+++||+ |++.++++++|+|+||+++++||.+  ..|.+++..+.....     ..|.++++ .+++.|
T Consensus         9 g~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w   86 (456)
T 3mdm_A            9 GRVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMS--TKYNKDSKMYRALQTVFGERLFGQGLVSECNYERW   86 (456)
T ss_dssp             CCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTC--TTSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHH
T ss_pred             cchHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhh--ccccccchhHHHHHHhhcccccCCCcccCCChHHH
Confidence            45789999999999985 8888999999999999999999976  357776654433322     23566665 489999


Q ss_pred             HHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHHHHHHhHhhhhhccCCCCCCCCCCCccch
Q 012536           81 RHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQ  160 (461)
Q Consensus        81 ~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~  160 (461)
                      +++|++++++|++++++.+.+ .+++.++.+++.+....+++.++|+.+++..+++|+++.++||.+++...+..   ..
T Consensus        87 ~~~Rr~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~---~~  162 (456)
T 3mdm_A           87 HKQRRVIDLAFSRSSLVSLME-TFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGAQ---KP  162 (456)
T ss_dssp             HHHHHHHGGGGSHHHHHTTHH-HHHHHHHHHHHHHHHTCSSSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGTCC---HH
T ss_pred             HHHHhhcccccCHHHHHHHHH-HHHHHHHHHHHHHHHhcCCCCeeeHHHHHHHHHHHHHHHHHcCCChhhhcccc---cH
Confidence            999999999999999999986 77889999999998765566789999999999999999999999987654333   34


Q ss_pred             HHHHhhhhhhHHHhhhhhHHHHHHHhhch--hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccC
Q 012536          161 FTKAFDDSNFIVYCRYVDVFWELKRYLNI--GMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESE  238 (461)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~  238 (461)
                      +.+.+..........    ...+..+++.  ...+...+....+.+++.+.++++++....++  ....|+++.++.+.+
T Consensus       163 ~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~--~~~~d~l~~ll~~~~  236 (456)
T 3mdm_A          163 LSQAVKLMLEGITAS----RNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGE--EVPADILTQILKAEE  236 (456)
T ss_dssp             HHHHHHHHHHHHHHH----HHSCGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--CCCCCHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHH----HHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc--cchhhHHHHHHHhcC
Confidence            444444333222111    1112223322  12234456667777888888888876554322  135689999998753


Q ss_pred             CCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcChH
Q 012536          239 KDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHY  318 (461)
Q Consensus       239 ~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~  318 (461)
                         +.++++++.+++..+++||+|||+.+++|++++|++||++|+||++|++++++..+         .++.+++.+|||
T Consensus       237 ---~~~~~~~l~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~---------~~~~~~l~~lpy  304 (456)
T 3mdm_A          237 ---GAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKR---------YLDFEDLGRLQY  304 (456)
T ss_dssp             ---SCSSSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCS---------SCCHHHHHHCHH
T ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCCCC---------CCCHHHHhcCHH
Confidence               34889999999999999999999999999999999999999999999999997653         368999999999


Q ss_pred             HHHHHHHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCcc
Q 012536          319 LHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKF  398 (461)
Q Consensus       319 l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~  398 (461)
                      |+|||+|+||++|+++...|++.+|.++ +||.|||||.|.++.+++||||++| +||++|+||||+++.   ......+
T Consensus       305 l~a~i~E~lRl~p~~~~~~r~~~~d~~i-~g~~Ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~PeRfl~~~---~~~~~~~  379 (456)
T 3mdm_A          305 LSQVLKESLRLYPPAWGTFRLLEEETLI-DGVRVPGNTPLLFSTYVMGRMDTYF-EDPLTFNPDRFGPGA---PKPRFTY  379 (456)
T ss_dssp             HHHHHHHHHHHCCSSCCEEEEECSCEEE-TTEEECSSEEEEECHHHHHTCTTTS-SSTTSCCGGGGSTTS---CCCSSSC
T ss_pred             HHHHHHHHHHhCCCccccccccCCceeE-CCEEECCCCEEEeehHHhcCCchhc-CCccccCccccCCCC---CCCCCcc
Confidence            9999999999999999888888888776 9999999999999999999999999 999999999999732   2235679


Q ss_pred             cccCCCCCCCCChHHHHHHHHHHHHHhccceEEEeecCCCccceeeeEEEeeCCceeeEEeeC
Q 012536          399 AAFQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETKEATYRTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       399 ~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  461 (461)
                      +|||+|+|.|+|++||++|++++++.|+++|+|++++++ +.......++.|.+++++++++|
T Consensus       380 ~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~r  441 (456)
T 3mdm_A          380 FPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQ-RFGLQEQATLKPLDPVLCTLRPR  441 (456)
T ss_dssp             CTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEECTTC-CCCEEESSSEEESSCCEEEEEEC
T ss_pred             cCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCeEEeCCCC-cceeecceEEecCCCeEEEEEEc
Confidence            999999999999999999999999999999999998753 44555556778999999999987


No 4  
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00  E-value=3.7e-71  Score=535.18  Aligned_cols=432  Identities=19%  Similarity=0.233  Sum_probs=344.0

Q ss_pred             hhhhhHHHHHHHHhcCc-EEEecCCCCeEEecChhhHHhhhhcCccccCCChhhHHH--hH--hhccCceeeeCChhHHH
Q 012536            8 FSRLFDYQTSLAKKYRT-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWNL--MR--DLFGDGIFAVDGDKWRH   82 (461)
Q Consensus         8 ~~~~~~~~~~~~~~yg~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~~--~~--~~~g~~l~~~~~~~~~~   82 (461)
                      .++++.++.+|+++||+ |++++|+.++|+|+||+++++||.++ +.|++++.....  ..  ...+.++++.+|+.|++
T Consensus        31 ~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~f~~r~~~~~~~~~~~~~~~~~~l~~~~g~~w~~  109 (487)
T 3n9y_A           31 THKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSE-GPNPERFLIPPWVAYHQYYQRPIGVLLKKSAAWKK  109 (487)
T ss_dssp             GGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTC-CSSCCCCCCHHHHHHHHHTTCCCCGGGCCHHHHHH
T ss_pred             CcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhC-CCCCCCCCCcHHHHHHHHccccCCCccCCcHHHHH
Confidence            35789999999999985 77778999999999999999999887 567765432211  11  12356789999999999


Q ss_pred             HHhhhccc-CCHHHHHHhHHHHHHHHHHHHHHHHHHhc----ccCCceeHHHhHHHHHHhHhhhhhccCCCCCCCCCCC-
Q 012536           83 QRKLASYE-FSTKILRDFSSAVFRANAEKLTSKFSVAA----AAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDD-  156 (461)
Q Consensus        83 ~R~~~~~~-fs~~~l~~~~~~~~~~~~~~l~~~l~~~~----~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~-  156 (461)
                      +|+++++. |+.+.++.+.+ ++++.++.+++.+.+..    +++.++|+..++..+++|+++.++||.+++..++... 
T Consensus       110 ~Rr~l~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~  188 (487)
T 3n9y_A          110 DRVALNQEVMAPEATKNFLP-LLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFGERQGMLEEVVNP  188 (487)
T ss_dssp             HHHHHHHHHTSHHHHTTHHH-HHHHHHHHHHHHHHHHHHHHTSSSEEECCHHHHHHHHHHHHHHHHHSSCCCTTSSSCCH
T ss_pred             HHHhcCcccCCchHHHHhhh-HHHHHHHHHHHHHHHHhcccccCCCCccHHHHHHHHHHHHHHHHHhcccccccCCCCCh
Confidence            99999995 99999999986 77889999998887632    2345799999999999999999999999987654321 


Q ss_pred             ccchHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-ccChhhHHHHHhh
Q 012536          157 FGNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVEL-DRGKEDILSRFLL  235 (461)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~l~~ll~  235 (461)
                      ....+.+.+.............+ +.+.++++...++...+....+.+++.+.++++.+....... .....|+++.+++
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~p-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~  267 (487)
T 3n9y_A          189 EAQRFIDAIYQMFHTSVPMLNLP-PDLFRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWELRQKGSVHHDYRGILYRLLG  267 (487)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTTSC-HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSSCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcC-HHHHhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHHHh
Confidence            12334444443332221111111 113344444455556666667777777777776655433211 1234689999987


Q ss_pred             ccCCCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhc
Q 012536          236 ESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEK  315 (461)
Q Consensus       236 ~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (461)
                      .     +.++++++.+++..+++||+|||+.+++|++++|+.||++|+||++|++++++....         ++.+++.+
T Consensus       268 ~-----~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~---------~~~~~l~~  333 (487)
T 3n9y_A          268 D-----SKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQG---------DMATMLQL  333 (487)
T ss_dssp             S-----CSSCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTT---------CHHHHTTS
T ss_pred             c-----CCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhChHHHHHHHHHHHHhhccccc---------chhhhhhh
Confidence            4     248999999999999999999999999999999999999999999999999986532         36899999


Q ss_pred             ChHHHHHHHHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCC
Q 012536          316 MHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESP  395 (461)
Q Consensus       316 lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~  395 (461)
                      ||||+|||+|++|++|+++.++|.+.+|.++ +||.||+||.|.++.+++||||++| +||++|+||||++++.  ....
T Consensus       334 lpyl~avi~E~lRl~p~~~~~~R~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~PeR~l~~~~--~~~~  409 (487)
T 3n9y_A          334 VPLLKASIKETLRLHPISVTLQRYLVNDLVL-RDYMIPAKTLVQVAIYALGREPTFF-FDPENFDPTRWLSKDK--NITY  409 (487)
T ss_dssp             CHHHHHHHHHHHHHSCSSSEEEEECSSCEEE-TTEEECTTCEEEEEHHHHHTCTTTS-SSTTSCCGGGGTCSCT--TSST
T ss_pred             CHHHHHHHHHHhhhCCcccccceeecCceee-CCEEECCCCEEEeCcHHhcCCcccC-CCcccCChhhcCCCCC--CCCC
Confidence            9999999999999999999888888888777 9999999999999999999999999 9999999999997322  2235


Q ss_pred             CcccccCCCCCCCCChHHHHHHHHHHHHHhccceEEEeecCCCccceeeeEEEeeCCceeeEEeeC
Q 012536          396 YKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETKEATYRTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       396 ~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  461 (461)
                      ..++|||+|+|.|+|++||++|++++++.|+++|+|+++++ .++......++.|+++++|++++|
T Consensus       410 ~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~r  474 (487)
T 3n9y_A          410 FRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQHL-SDVGTTFNLILMPEKPISFTFWPF  474 (487)
T ss_dssp             TTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTC-CCCCEEESSSEEESSCCCEEEEEC
T ss_pred             CCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCEEEecCC-cccccceeeeecCCCCceeEEEEC
Confidence            67899999999999999999999999999999999999875 355555567788999999999987


No 5  
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00  E-value=8.3e-72  Score=539.44  Aligned_cols=435  Identities=23%  Similarity=0.353  Sum_probs=337.5

Q ss_pred             cccccchhhhhHHHHHHHHhcCc-EEEecCCCCeEEecChhhHHhhhhcC-ccccCCChhhHHHhHhhccCceeeeCChh
Q 012536            2 LNLLIHFSRLFDYQTSLAKKYRT-FRLLQPSCSEIFTTDPVNIEHILKTN-FSNYGKGDYNWNLMRDLFGDGIFAVDGDK   79 (461)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~yg~-~~~~~~~~~~v~v~dp~~~~~il~~~-~~~f~~~~~~~~~~~~~~g~~l~~~~~~~   79 (461)
                      ++++...++++.++.+|+++||+ |++.+|+.++|+|+||+++++||.++ .+.|..++... .. ...+.++++.+|+.
T Consensus        26 Gn~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~-~~-~~~~~~l~~~~g~~  103 (485)
T 3nxu_A           26 GNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFG-PV-GFMKSAISIAEDEE  103 (485)
T ss_dssp             BTGGGGGGCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCS-CC-GGGGGSTTTCCHHH
T ss_pred             cCcHHhhcChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCcccc-cc-cccccCccccCCcH
Confidence            45566667889999999999985 88889999999999999999999986 45676654332 12 24567888999999


Q ss_pred             HHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHHHHHHhHhhhhhccCCCCCCCCCCCccc
Q 012536           80 WRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGN  159 (461)
Q Consensus        80 ~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~  159 (461)
                      |+++|++++++|++++++.+.+ .+++.++.+++.+.+....++++|+.+++..+++|+++.++||.+++..++..   .
T Consensus       104 w~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~~~~~g~~~d~~~~~~~~~~dvi~~~~fG~~~~~~~~~~---~  179 (485)
T 3nxu_A          104 WKRLRSLLSPTFTSGKLKEMVP-IIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQ---D  179 (485)
T ss_dssp             HHHHHHHHGGGGCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTCCEEHHHHHHHHHHHHHHHHHHSCCCCGGGCTT---C
T ss_pred             HHHHHhhcChhcCHHHHHHHHH-HHHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHHHHHcCCccccccCCC---c
Confidence            9999999999999999999986 77889999999997765667799999999999999999999999998765433   3


Q ss_pred             hHHHHhhhhhhHHHh-------hhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHH
Q 012536          160 QFTKAFDDSNFIVYC-------RYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSR  232 (461)
Q Consensus       160 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~  232 (461)
                      .+.+.+.........       .....+.++..+++....  .......+..++.+.++++.+...     ....|+++.
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~d~l~~  252 (485)
T 3nxu_A          180 PFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVF--PREVTNFLRKSVKRMKESRLEDTQ-----KHRVDFLQL  252 (485)
T ss_dssp             HHHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHHHTTCCSS--CHHHHHHHHHHHHHHHHHHHHCC--------CCCHHHH
T ss_pred             HHHHHHHHHhchhhHHHHHHHHHHhhhhHHHHHHhhhhhc--hHHHHHHHHHHHHHHHHHHHhccC-----CCcccHHHH
Confidence            444444433221100       000001111122211100  112223344444444444432211     145689999


Q ss_pred             HhhccCCC----CCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcc
Q 012536          233 FLLESEKD----PESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLV  308 (461)
Q Consensus       233 ll~~~~~~----~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~  308 (461)
                      |+++....    +..++++++.+++..+++||+|||+.+++|++++|++||++|+||++|++++++...         .+
T Consensus       253 ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~---------~~  323 (485)
T 3nxu_A          253 MIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKA---------PP  323 (485)
T ss_dssp             HHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTTC---------CC
T ss_pred             HHHhhhccccccccCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhccCC---------CC
Confidence            99865322    346999999999999999999999999999999999999999999999999987653         36


Q ss_pred             cHHHhhcChHHHHHHHHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCC
Q 012536          309 TEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNG  388 (461)
Q Consensus       309 ~~~~l~~lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~  388 (461)
                      +.+++.+||||+|||+|+||++|+++.+.|.+.+|.++ +||.|||||.|.++.+++||||++| +||++|+||||++++
T Consensus       324 ~~~~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~i-~g~~Ip~Gt~V~~~~~~~~~d~~~~-~dp~~F~PeR~l~~~  401 (485)
T 3nxu_A          324 TYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEI-NGMFIPKGVVVMIPSYALHRDPKYW-TEPEKFLPERFSKKN  401 (485)
T ss_dssp             CHHHHHHCHHHHHHHHHHHHHSCSCSCEEEECCSCEEE-TTEEECTTCEEEECHHHHHTCTTTC-SSTTSCCGGGGSHHH
T ss_pred             CHHHHhcChHHHHHHHHHHhcCCCccCcceeeCCCeeE-CCEEECCCCEEEEchHHhcCChhhc-CCccCcCccccCCCc
Confidence            89999999999999999999999999888888888777 9999999999999999999999999 999999999999732


Q ss_pred             ccCCCCCCcccccCCCCCCCCChHHHHHHHHHHHHHhccceEEEeecCCC-ccceeeeEEEeeCCceeeEEeeC
Q 012536          389 VFRSESPYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETK-EATYRTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       389 ~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r  461 (461)
                      . ....+..++|||+|+|.|+|++||++|++++++.|+++|+|+++++.. +.......++.|+.++++++++|
T Consensus       402 ~-~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r  474 (485)
T 3nxu_A          402 K-DNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLKVESR  474 (485)
T ss_dssp             H-TTSCTTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEECCTTCCSSCCBCSSSSCCBSSCCEEEEEEC
T ss_pred             c-ccCCCCCccCCCCCCcCCchHHHHHHHHHHHHHHHHHhcEEEeCCCCCCCcccCCCeeccCCCCeEEEEEEc
Confidence            1 122456799999999999999999999999999999999999986543 33344455677888999999987


No 6  
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00  E-value=1.7e-71  Score=540.35  Aligned_cols=441  Identities=16%  Similarity=0.224  Sum_probs=333.0

Q ss_pred             cccccchhhhhHHHHHHHHhcCc-EEEecCCCCeEEecChhhHHhhhhcCccccCCChhhHHHhHhhccCce-eeeCChh
Q 012536            2 LNLLIHFSRLFDYQTSLAKKYRT-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWNLMRDLFGDGI-FAVDGDK   79 (461)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~yg~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~g~~l-~~~~~~~   79 (461)
                      ++++...++++.++.+|+++||+ |++++++.++|+|+||+++++|+.++...|.+++..........|.++ +..+|+.
T Consensus        21 G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~~~~g~~l~~~~~g~~  100 (507)
T 3pm0_A           21 GNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASFRVVSGGRSMAFGHYSEH  100 (507)
T ss_dssp             -------CCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCHHHHHGGGGTCSSSSCSSHH
T ss_pred             CchhhcCccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcchHHHhhcCCCceEECCCChH
Confidence            34555567899999999999984 888899999999999999999998877888876655432222245676 4457999


Q ss_pred             HHHHHhhhcccCCHHH------HHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHHHHHHhHhhhhhccCCCCCCCC
Q 012536           80 WRHQRKLASYEFSTKI------LRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSG  153 (461)
Q Consensus        80 ~~~~R~~~~~~fs~~~------l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~  153 (461)
                      |+++|+++++.|+...      ++.+.+ .+.+.++.+++.+.....++..+|+.+++..+++|+++.++||.+++..+ 
T Consensus       101 w~~~R~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~-  178 (507)
T 3pm0_A          101 WKVQRRAAHSMMRNFFTRQPRSRQVLEG-HVLSEARELVALLVRGSADGAFLDPRPLTVVAVANVMSAVCFGCRYSHDD-  178 (507)
T ss_dssp             HHHHHHHHHHHHHHSTTSSTTHHHHHHH-HHHHHHHHHHHHHHHTTGGGCCBCCHHHHHHHHHHHHHHHHTSCCCCTTC-
T ss_pred             HHHHHHHHHHHHHHhcCCccchHHHHHH-HHHHHHHHHHHHHHhhcccCCCcChHHHHHHHHHHHHHHHHccccCCCCC-
Confidence            9999999988654322      233553 67788999999988765566789999999999999999999999986532 


Q ss_pred             CCCccchHHHHhhhhhhHHHhhhhhHHHHHHHhhchh---hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHH
Q 012536          154 SDDFGNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIG---MEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDIL  230 (461)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  230 (461)
                        +....+.+.+..............++++.++++..   ..+...+..+.+.+++.+.++++++....++   ...|++
T Consensus       179 --~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~~~d~l  253 (507)
T 3pm0_A          179 --PEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRHCESLRPGA---APRDMM  253 (507)
T ss_dssp             --HHHHHHTSCHHHHHHHHSTTCCTTTCGGGGGSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTC---CCCSHH
T ss_pred             --HHHHHHHHHHHHHHHhcccchHHHHhHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc---CCccHH
Confidence              11112222222222111111111122233444433   3566677788888999999998887654322   456888


Q ss_pred             HHHhhccCC--C------CCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcch
Q 012536          231 SRFLLESEK--D------PESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCAD  302 (461)
Q Consensus       231 ~~ll~~~~~--~------~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~  302 (461)
                      +.++...+.  +      +..++++++.+++..+++||+|||+.+++|++++|++||++|+||++||+++++..+     
T Consensus       254 ~~ll~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~-----  328 (507)
T 3pm0_A          254 DAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDR-----  328 (507)
T ss_dssp             HHHHHHHHHHHSCC----CCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCTTS-----
T ss_pred             HHHHHHhhhhccccccCCCCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCCC-----
Confidence            888854321  1      125999999999999999999999999999999999999999999999999987543     


Q ss_pred             hhhhcccHHHhhcChHHHHHHHHhhcCCCCCCCC-CccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCccc
Q 012536          303 EFAKLVTEAALEKMHYLHAALSETLRLYPAVPVD-GKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRP  381 (461)
Q Consensus       303 ~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~-~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P  381 (461)
                          .++.+++.+||||+|||+|+||++|+++.. .|.+.+|.++ +||.|||||.|.++.+++||||++| +||++|+|
T Consensus       329 ----~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~~r~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~P  402 (507)
T 3pm0_A          329 ----LPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSV-LGYHIPKDTVVFVNQWSVNHDPLKW-PNPENFDP  402 (507)
T ss_dssp             ----CCCGGGGGGCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEE-TTEEECTTCEEEEBSHHHHSCTTTC-SSSSSCCG
T ss_pred             ----CCChhhcccChHHHHHHHHHHhcCCCcccCCCccccCCceE-cCEEECCCCEEEeChHHHhCCcccC-CCcCccCC
Confidence                358899999999999999999999999974 5666666666 9999999999999999999999999 99999999


Q ss_pred             CCcCCCCcc-CCCCCCcccccCCCCCCCCChHHHHHHHHHHHHHhccceEEEeecCCC-ccceeeeEEEeeCCceeeEEe
Q 012536          382 ERWLVNGVF-RSESPYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETK-EATYRTMFTLHVDKGLHLYAY  459 (461)
Q Consensus       382 ~R~~~~~~~-~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  459 (461)
                      |||+++... .......++|||+|+|+|+|++||++|++++++.||++|||+++++.. +.....+.++.|. +++|+++
T Consensus       403 eRfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p~-~~~v~~~  481 (507)
T 3pm0_A          403 ARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKMNFSYGLTIKPK-SFKVNVT  481 (507)
T ss_dssp             GGGBCTTSCBCHHHHTTCCSSCCSTTCCSCHHHHHHHHHHHHHHHHHHEEEEECTTCCSCCCEEESSSEEEC-SCCEEEE
T ss_pred             CcccCCCCcccCCCcccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHeEEecCCCCCCCCCCCCCccccCC-CcEEEEE
Confidence            999973221 111235789999999999999999999999999999999999986542 2222334455565 5899998


Q ss_pred             eC
Q 012536          460 PR  461 (461)
Q Consensus       460 ~r  461 (461)
                      +|
T Consensus       482 ~R  483 (507)
T 3pm0_A          482 LR  483 (507)
T ss_dssp             ES
T ss_pred             Ec
Confidence            87


No 7  
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00  E-value=3.7e-70  Score=525.83  Aligned_cols=430  Identities=17%  Similarity=0.242  Sum_probs=335.4

Q ss_pred             hhhhhHHHHHHHHhcCc-EEEecCCCCeEEecChhhHHhhhhcCccccCCChhhHHHhHhhccCceeeeCChhHHHHHhh
Q 012536            8 FSRLFDYQTSLAKKYRT-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWNLMRDLFGDGIFAVDGDKWRHQRKL   86 (461)
Q Consensus         8 ~~~~~~~~~~~~~~yg~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~g~~l~~~~~~~~~~~R~~   86 (461)
                      .++++.++.+++++||+ |++.+++.++|+|+||+++++|+.++...|++++..........|.++++.+++.|+++|++
T Consensus        29 ~~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~~~~~~~l~~~~g~~~~~~Rr~  108 (476)
T 2fdv_A           29 TEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRF  108 (476)
T ss_dssp             TTBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHHHHHHTTCSSSSCCHHHHHHHHHH
T ss_pred             CcchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHHhhhcCCCCeEecCchHHHHHHHH
Confidence            46789999999999985 77778888999999999999999776567876443221111123578888899999999999


Q ss_pred             hcccCCHHHH--HHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHHHHHHhHhhhhhccCCCCCCCCCCCccchHHHH
Q 012536           87 ASYEFSTKIL--RDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKA  164 (461)
Q Consensus        87 ~~~~fs~~~l--~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~  164 (461)
                      ++++|++..+  +.+.+ .+.+.++.+++.+...  .++++|+.+++..+++|+++.++||.+++..+   .....+.+.
T Consensus       109 ~~~~f~~~~~~~~~~~~-~i~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~---~~~~~~~~~  182 (476)
T 2fdv_A          109 SIATLRDFGVGKRGIEE-RIQEEAGFLIDALRGT--GGANIDPTFFLSRTVSNVISSIVFGDRFDYKD---KEFLSLLRM  182 (476)
T ss_dssp             HHHHHHHTTTTSHHHHH-HHHHHHHHHHHHHHHT--TTCCBCCHHHHHHHHHHHHHHHHHSSCCCTTC---HHHHHHHHH
T ss_pred             HHHHHHHhCCChhhHHH-HHHHHHHHHHHHHHhc--CCCccChHHHHHHHHHHHHHHHHcCCcCCCCC---HHHHHHHHH
Confidence            9999987665  56664 6778899999988752  34689999999999999999999999887421   112333333


Q ss_pred             hhhhhhHHHhh---hhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccCC--
Q 012536          165 FDDSNFIVYCR---YVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEK--  239 (461)
Q Consensus       165 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~~--  239 (461)
                      +..........   ....++.+.++++ ...+...++...+.+++.+.++++++..+.+    ...|+++.|+.+..+  
T Consensus       183 ~~~~~~~~~~~~~~~~~~~p~l~~~l~-~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~----~~~d~l~~ll~~~~~~~  257 (476)
T 2fdv_A          183 MLGIFQFTSTSTGQLYEMFSSVMKHLP-GPQQQAFQLLQGLEDFIAKKVEHNQRTLDPN----SPRDFIDSFLIRMQEEE  257 (476)
T ss_dssp             HHHHHHHHTSHHHHHHHHHHHHHTTSC-SHHHHHHHHHHHHHHHHHHHHHHHHTTCCTT----SCCSHHHHHHHHHHHTT
T ss_pred             HHHHHHhhcccccchhhhhhhHHHhcC-cHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC----CCccHHHHHHHHHHhcc
Confidence            33332211100   1111121233444 2345566778888999999999887653221    346899999876421  


Q ss_pred             --CCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcCh
Q 012536          240 --DPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMH  317 (461)
Q Consensus       240 --~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp  317 (461)
                        ++..++++++.+++..+++||+|||+.+++|++++|++||++|++||+||+++++..+         .++.+++.+||
T Consensus       258 ~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~---------~~~~~~~~~lp  328 (476)
T 2fdv_A          258 KNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNR---------QPKFEDRAKMP  328 (476)
T ss_dssp             TCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSS---------CCCGGGGGGCH
T ss_pred             cCccccccHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCCC---------CCChhhhhcCh
Confidence              2346999999999999999999999999999999999999999999999999987542         25888999999


Q ss_pred             HHHHHHHHhhcCCCCCC-CCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCC
Q 012536          318 YLHAALSETLRLYPAVP-VDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPY  396 (461)
Q Consensus       318 ~l~a~i~E~lRl~~~~~-~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~  396 (461)
                      ||+|||+|+||++|+++ ...|.+.+|.++ +||.||+||.|.++.+++||||++| +||++|+||||+++.... ....
T Consensus       329 yl~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~g~~Ip~Gt~V~~~~~~~~rd~~~~-~dp~~F~PeR~l~~~~~~-~~~~  405 (476)
T 2fdv_A          329 YMEAVIHEIQRFGDVIPMSLARRVKKDTKF-RDFFLPKGTEVYPMLGSVLRDPSFF-SNPQDFNPQHFLNEKGQF-KKSD  405 (476)
T ss_dssp             HHHHHHHHHHHHHCSSTTCSCEECSSCEEE-TTEEECTTCEEEECHHHHHTCTTTC-SSTTSCCGGGGBCTTSCB-CCCT
T ss_pred             HHHHHHHHHHHhcCCcccCcceeccCCeeE-CCEeeCCCCEEEeehHHhhCChhhc-CCccccCchhhCCCCCCC-CCCc
Confidence            99999999999999999 567888888776 9999999999999999999999999 999999999999632111 1355


Q ss_pred             cccccCCCCCCCCChHHHHHHHHHHHHHhccceEEEeecCCCc--cce-eeeEEEeeCCceeeEEeeC
Q 012536          397 KFAAFQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETKE--ATY-RTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       397 ~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~r  461 (461)
                      .++|||+|+|.|+|++||++|++++++.|+++|+|+++++.+.  ... ..+.+..| .++++++++|
T Consensus       406 ~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~~~v~~~~R  472 (476)
T 2fdv_A          406 AFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIP-RNYTMSFLPR  472 (476)
T ss_dssp             TCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCSCSEESSSEEC-CCCCEEEEEC
T ss_pred             CcccCCCCCCCCCChHHHHHHHHHHHHHHHhhcEEEcCCCCCCCCccccccceeecC-CceEEEEEec
Confidence            7999999999999999999999999999999999999875432  223 34555667 6899999987


No 8  
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00  E-value=3.8e-70  Score=520.51  Aligned_cols=417  Identities=21%  Similarity=0.279  Sum_probs=334.7

Q ss_pred             ccccchhhhhHHHHHHHHhcC-cEEEecCCCCeEEecChhhHHhhhhcCccccCCChhhHHHhHhhccC-ceeeeCChhH
Q 012536            3 NLLIHFSRLFDYQTSLAKKYR-TFRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWNLMRDLFGD-GIFAVDGDKW   80 (461)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~yg-~~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~g~-~l~~~~~~~~   80 (461)
                      +++...++++ ++.+++++|| +|++.++|.++|+|+||+++++|+.++...|+..  +...+..++|. ++++.+++.|
T Consensus        25 ~~~~~~~~~~-~~~~~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~--~~~~~~~~~g~~~l~~~~g~~~  101 (444)
T 2ve3_A           25 ETLNFLNDGD-FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQAT--WPLSTRILLGPNALATQMGEIH  101 (444)
T ss_dssp             THHHHHHCTT-HHHHHHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEE--CCHHHHHHHCTTSGGGCCHHHH
T ss_pred             cHHHHhcCcH-HHHHHHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccc--hhHHHHHHhCccccccCCchHH
Confidence            3444445677 8889999998 5888878888999999999999999874456632  22233444565 7888999999


Q ss_pred             HHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHHHHHHhHhhhhhccCCCCCCCCCCCccch
Q 012536           81 RHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQ  160 (461)
Q Consensus        81 ~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~  160 (461)
                      +++|++++++|++++++.+.+ .+++.++.+++.+.    +++++|+.+.+..+++|+++.++|| +....   +   .+
T Consensus       102 ~~~R~~~~~~f~~~~l~~~~~-~i~~~~~~l~~~l~----~~~~vd~~~~~~~~~~~vi~~~~fG-~~~~~---~---~~  169 (444)
T 2ve3_A          102 RSRRKILYQAFLPRTLDSYLP-KMDGIVQGYLEQWG----KANEVIWYPQLRRMTFDVAATLFMG-EKVSQ---N---PQ  169 (444)
T ss_dssp             HHHHHHHHGGGCHHHHHTTHH-HHHHHHHHHHHHHH----HSSEEEHHHHHHHHHHHHHHHHHTC-HHHHS---C---TT
T ss_pred             HHHHHHHHhhcCHHHHHHHHH-HHHHHHHHHHHHhc----CCCcEeHHHHHHHHHHHHHHHHHcC-CCccc---H---HH
Confidence            999999999999999999985 77888999998874    2458999999999999999999999 33211   1   23


Q ss_pred             HHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccCCC
Q 012536          161 FTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEKD  240 (461)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~  240 (461)
                      +.+.+.........        +..+++...+++..++...+.+++.+.++++++..      ....|+++.|+.+.+++
T Consensus       170 ~~~~~~~~~~~~~~--------~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------~~~~d~l~~ll~~~~~~  235 (444)
T 2ve3_A          170 LFPWFETYIQGLFS--------LPIPLPNTLFGKSQRARALLLAELEKIIKARQQQP------PSEEDALGILLAARDDN  235 (444)
T ss_dssp             HHHHHHHHHHHHSS--------CCCCSTTSHHHHHHHHHHHHHHHHHHHHHHHHTSC------CCCSSHHHHHHHCBCTT
T ss_pred             HHHHHHHHHHHHhc--------CCccCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCC------CCccCHHHHHHhccccC
Confidence            33333322111100        01112222334566777888889999998887641      14568999999876555


Q ss_pred             CCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcChHHH
Q 012536          241 PESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLH  320 (461)
Q Consensus       241 ~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~  320 (461)
                      +..++++++.+++..+++||+|||+.+++|++++|++||++|++||+|++.+++..          .++.+++.+||||+
T Consensus       236 ~~~l~~~~i~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~----------~~~~~~l~~lpyl~  305 (444)
T 2ve3_A          236 NQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQ----------ELTAETLKKMPYLD  305 (444)
T ss_dssp             SCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHSSCCSS----------CCCHHHHTTCHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhccCC----------CCChhhhhcChHHH
Confidence            56799999999999999999999999999999999999999999999999987643          25899999999999


Q ss_pred             HHHHHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCcccc
Q 012536          321 AALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAA  400 (461)
Q Consensus       321 a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~~  400 (461)
                      |||+|++|++|+++...|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+||||++++......+..++|
T Consensus       306 a~i~E~lRl~p~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~l~~~~~~~~~~~~~~p  383 (444)
T 2ve3_A          306 QVLQEVLRLIPPVGGGFRELIQDCQF-QGFHFPKGWLVSYQISQTHADPDLY-PDPEKFDPERFTPDGSATHNPPFAHVP  383 (444)
T ss_dssp             HHHHHHHHHSCSSCEEEEEESSCEEE-TTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCGGGSSTTSTTTTSCTTSCCT
T ss_pred             HHHHHHHhcCCCccCccceeCCCeeE-CCEEECCCCEEEechHHhcCChhhc-CCcCccCccccCCCCcccCCCCceeeC
Confidence            99999999999999888888888777 9999999999999999999999999 999999999999632212224567999


Q ss_pred             cCCCCCCCCChHHHHHHHHHHHHHhccceEEEeecCCCccceeeeEEEeeCCceeeEEeeC
Q 012536          401 FQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETKEATYRTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       401 Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  461 (461)
                      ||+|+|.|+|++||++|++++++.|+++|++++.++. ++......++.|..+++|++++|
T Consensus       384 FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~l~v~~~~r  443 (444)
T 2ve3_A          384 FGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQ-NLELVVTPSPRPKDNLRVKLHSL  443 (444)
T ss_dssp             TCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEEECSSC-CCCEEESSSEEETTCCEEEEEEC
T ss_pred             CCCCCccCccHHHHHHHHHHHHHHHHHhCEEEeCCCC-CcceeccccccCCCCceEEEEeC
Confidence            9999999999999999999999999999999997653 44445556678889999999987


No 9  
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00  E-value=1.7e-69  Score=522.81  Aligned_cols=433  Identities=19%  Similarity=0.220  Sum_probs=319.2

Q ss_pred             hhhhhHHHHHHHHhcCc-EEEecCCCCeEEecChhhHHhhhhcCccccCCChhhHH--H-hHhhccCce-eeeCChhHHH
Q 012536            8 FSRLFDYQTSLAKKYRT-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWN--L-MRDLFGDGI-FAVDGDKWRH   82 (461)
Q Consensus         8 ~~~~~~~~~~~~~~yg~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~--~-~~~~~g~~l-~~~~~~~~~~   82 (461)
                      .++++..+.+|+++||+ |++++|++++|+|+||+++++||.++...|+.++....  . .....+.++ +..+|+.|++
T Consensus        29 ~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~~~g~~w~~  108 (479)
T 3tbg_A           29 FQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVFLARYGPAWRE  108 (479)
T ss_dssp             TTSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCGGGGGGTCBTTBCCSTTCCSSHHHHH
T ss_pred             CCCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchHHHHHhccCCCCCceeeCCCCHHHHH
Confidence            46889999999999985 88999999999999999999999988777876543321  1 111123344 5567999999


Q ss_pred             HHhhhcccCCHHHHHHh-HHHHHHHHHHHHHHHHHHhcccCCceeHHHhHHHHHHhHhhhhhccCCCCCCCCCCCccchH
Q 012536           83 QRKLASYEFSTKILRDF-SSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQF  161 (461)
Q Consensus        83 ~R~~~~~~fs~~~l~~~-~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~  161 (461)
                      +|+.+.+.|+...+... ....+......+...+..  ..+..+|+...+..+++|+++.++||.+++..+..   ...+
T Consensus       109 ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~---~~~~  183 (479)
T 3tbg_A          109 QRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFAN--HSGRPFRPNGLLDKAVSNVIASLTCGRRFEYDDPR---FLRL  183 (479)
T ss_dssp             HHHHHHHHHHHTTSTTCHHHHHHHHHHHHHHHHHHT--TTTCCBCTHHHHHHHHHHHHHHHHHSCCCCTTCHH---HHHH
T ss_pred             HHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHHHh--ccCCcccHHHHHHHHHHHHHHHhhcCCcccccchh---hhhh
Confidence            99999988876665432 223444555555555544  45568999999999999999999999998764311   1222


Q ss_pred             HHHhhhhhhHHHhhhhhHH--HHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHh----h
Q 012536          162 TKAFDDSNFIVYCRYVDVF--WELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFL----L  235 (461)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll----~  235 (461)
                      .+................+  +++...+ ....++.....+.....+.+.+++..+......   ...++++.++    .
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~d~~~~~~~~~~~  259 (479)
T 3tbg_A          184 LDLAQEGLKEESGFLREVLNAVPVLLHI-PALAGKVLRFQKAFLTQLDELLTEHRMTWDPAQ---PPRDLTEAFLAEMEK  259 (479)
T ss_dssp             HHHHHHHHHTTSSHHHHHHHHSGGGGGS-HHHHHHHTHHHHHHHHHHHHHHHHHHHHCCTTS---CCCSHHHHHHHHHHH
T ss_pred             hhhhhhhhhhhhhhhhhhhcccchhccc-hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccc---ccchhhhhhhhhhhh
Confidence            2222111111111111111  1111111 122233445556666667777776666544322   2334433333    2


Q ss_pred             ccCCCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhc
Q 012536          236 ESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEK  315 (461)
Q Consensus       236 ~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (461)
                      ...+.+..++++++.+++..+++||+|||+.+++|++++|++||++|+|||+|++.+++...         .++.+++.+
T Consensus       260 ~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~~~~---------~~~~~~l~~  330 (479)
T 3tbg_A          260 AKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVR---------RPEMGDQAH  330 (479)
T ss_dssp             TTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSS---------CCCHHHHTT
T ss_pred             cccCCccchhhHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCHHHHHHHHHHHHHHHhhcc---------ccchhhhcc
Confidence            23344567999999999999999999999999999999999999999999999999987653         358999999


Q ss_pred             ChHHHHHHHHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCC
Q 012536          316 MHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESP  395 (461)
Q Consensus       316 lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~  395 (461)
                      ||||+|||+||||++|++|...|++..+++.++||.|||||.|.++.+++||||++| +||++|+||||++++. ...++
T Consensus       331 lpyl~avi~EtlRl~p~~~~~~~~~~~~d~~~~g~~IP~Gt~V~~~~~~~h~d~~~~-~dP~~F~PeRfl~~~~-~~~~~  408 (479)
T 3tbg_A          331 MPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVW-EKPFRFHPEHFLDAQG-HFVKP  408 (479)
T ss_dssp             CHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTS-SSTTSCCGGGGBCTTC-CBCCC
T ss_pred             ccccccceeeeccccccccccceeecCCCceECCEEecCCCeeeechhhhcCChhhC-CCccccCccccCCCCc-ccCCC
Confidence            999999999999999999998887665444449999999999999999999999999 9999999999997322 12346


Q ss_pred             CcccccCCCCCCCCChHHHHHHHHHHHHHhccceEEEeecCCCccce--eeeEEEeeCCceeeEEeeC
Q 012536          396 YKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETKEATY--RTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       396 ~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~r  461 (461)
                      ..|+|||+|+|.|+|++||++|+++++|.||++|||+++++++.+..  ..++++.|. +++|+++||
T Consensus       409 ~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~P~-~~~v~~~pR  475 (479)
T 3tbg_A          409 EAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAFLVSPS-PYELCAVPR  475 (479)
T ss_dssp             TTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEECCTTSCCCCSCEEESSSEEEC-CCCBEEEEC
T ss_pred             CceecCCCCCcCChhHHHHHHHHHHHHHHHHHccEEEeCCCCCCccccccceeeecCC-CeEEEEEEC
Confidence            78999999999999999999999999999999999999876544332  334566674 799999998


No 10 
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00  E-value=4.7e-69  Score=516.48  Aligned_cols=423  Identities=22%  Similarity=0.409  Sum_probs=333.0

Q ss_pred             hhhhHHHHHHHHhcCc-EEEecCCCCeEEecChhhHHhhhhcCccccCCChh-hHHHhHhhccCceeee--CChhHHHHH
Q 012536            9 SRLFDYQTSLAKKYRT-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDY-NWNLMRDLFGDGIFAV--DGDKWRHQR   84 (461)
Q Consensus         9 ~~~~~~~~~~~~~yg~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~-~~~~~~~~~g~~l~~~--~~~~~~~~R   84 (461)
                      ++++..+.+++++||+ |++.+++.++|+|+||+++++|+.++  .|.+... ....+....+.++++.  +++.|+++|
T Consensus        23 ~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~~--~f~~~~~~~~~~~~~~~~~~l~~~~~~g~~w~~~R  100 (470)
T 2ij2_A           23 DKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES--RFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAH  100 (470)
T ss_dssp             SCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTT--TEEECCCHHHHHHHHHHTTSGGGSCTTSHHHHHHH
T ss_pred             ccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhhc--CcCcCchhHHHHHHHhcCCceEEcCCCchHHHHHH
Confidence            4788899999999985 77778899999999999999999753  4554221 1112233456777776  899999999


Q ss_pred             hhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHHHHHHhHhhhhhccCCCCCCCCCCCccchHHHH
Q 012536           85 KLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKA  164 (461)
Q Consensus        85 ~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~  164 (461)
                      ++++++|++++++.+.+ .+.+.++.+++.+... ..++.+|+...+..+++|+++.++||.+++..+..  ....+.+.
T Consensus       101 r~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~~-~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~--~~~~~~~~  176 (470)
T 2ij2_A          101 NILLPSFSQQAMKGYHA-MMVDIAVQLVQKWERL-NADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRD--QPHPFITS  176 (470)
T ss_dssp             HHHGGGGSTTTHHHHHH-HHHHHHHHHHHHHHTC-CTTCCEEHHHHHHHHHHHHHHHHHHSCCCCGGGCS--SCCHHHHH
T ss_pred             HHhccccCHHHHHHHHH-HHHHHHHHHHHHHHhh-CCCCeEEHHHHHHHHHHHHHHHHHcCCcccccccC--CCCHHHHH
Confidence            99999999999999986 6788899999888653 23568999999999999999999999998754221  12455555


Q ss_pred             hhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccCC-CCCC
Q 012536          165 FDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEK-DPES  243 (461)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~~-~~~~  243 (461)
                      +.............+  ++..+++....+...++...+.+++.+.++++++...      ...|+++.|+.+.++ ++..
T Consensus       177 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~------~~~dll~~ll~~~~~~~~~~  248 (470)
T 2ij2_A          177 MVRALDEAMNKLQRA--NPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGE------QSDDLLTHMLNGKDPETGEP  248 (470)
T ss_dssp             HHHHHHHHHHTC-----CTTSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC------CCSSHHHHHHHCCCTTTCCC
T ss_pred             HHHHHHHHHHHHhhh--hhHhhccchHHHHHHHHHHHHHHHHHHHHHHHHhccc------CchhHHHHHHhccCcccCCC
Confidence            444332221111101  1112222233445566777888888888888775421      346899999987543 3456


Q ss_pred             CCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcChHHHHHH
Q 012536          244 MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLHAAL  323 (461)
Q Consensus       244 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i  323 (461)
                      ++++++.+++..+++||+|||+.+++|++++|++||++|+||++|++++++...          ++.+++.+||||+|||
T Consensus       249 ls~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~----------~~~~~~~~lpyl~a~i  318 (470)
T 2ij2_A          249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV----------PSYKQVKQLKYVGMVL  318 (470)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCSSS----------CCHHHHHTCHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCC----------CCHHHHhCCHHHHHHH
Confidence            999999999999999999999999999999999999999999999999986431          5899999999999999


Q ss_pred             HHhhcCCCCCCCCCccccccccccCC-eeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCcccccC
Q 012536          324 SETLRLYPAVPVDGKNAAEDDILPDG-FKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQ  402 (461)
Q Consensus       324 ~E~lRl~~~~~~~~r~~~~~~~~~~g-~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~~Fg  402 (461)
                      +|+||++|+++...|.+.+|.++ +| |.|||||.|.++.+++||||++||+||++|+|||| ++  ........++|||
T Consensus       319 ~E~lRl~p~~~~~~r~~~~d~~~-~g~~~Ip~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeR~-~~--~~~~~~~~~~pFG  394 (470)
T 2ij2_A          319 NEALRLWPTAPAFSLYAKEDTVL-GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-EN--PSAIPQHAFKPFG  394 (470)
T ss_dssp             HHHHHHSCSSCEEEEEESSCEEE-TTTEEECTTCEEEEEHHHHTTCHHHHCSCTTSCCGGGG-SS--GGGSCTTSCCTTC
T ss_pred             HHHHhcCCCccccceeccCCccc-CCceEeCCCCEEEechHHhcCCHhhhCCCccccCcccc-CC--CCcCCCccccCCC
Confidence            99999999999888888888766 77 99999999999999999999999999999999999 31  1112346789999


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHhccceEEEeecCCCccceeeeEEEeeCCceeeEEeeC
Q 012536          403 AGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETKEATYRTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       403 ~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  461 (461)
                      +|+|.|+|++||++|++++++.|+++|+|+ .++..+.......++.|. ++++++++|
T Consensus       395 ~G~r~C~G~~lA~~e~~~~la~ll~~f~~~-~~~~~~~~~~~~~~~~p~-~~~v~~~~R  451 (470)
T 2ij2_A          395 NGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDIKETLTLKPE-GFVVKAKSK  451 (470)
T ss_dssp             CGGGSCTTHHHHHHHHHHHHHHHHHHEEEE-CTTCCCCCEEESSSEEET-TCEEEEEEC
T ss_pred             CCCCcCCcHHHHHHHHHHHHHHHHHHeeEe-eCCCCccccccceEecCC-CeEEEEEEc
Confidence            999999999999999999999999999999 433223444445567787 899999987


No 11 
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00  E-value=1.5e-69  Score=522.58  Aligned_cols=435  Identities=19%  Similarity=0.252  Sum_probs=334.4

Q ss_pred             cccccc-hhhhhHHHHHHHHhcCc-EEEecCCCCeEEecChhhHHhhhhcCccccCCChhhHHHhHhhccCceeeeCChh
Q 012536            2 LNLLIH-FSRLFDYQTSLAKKYRT-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWNLMRDLFGDGIFAVDGDK   79 (461)
Q Consensus         2 ~~~~~~-~~~~~~~~~~~~~~yg~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~g~~l~~~~~~~   79 (461)
                      ++++.. .++++.++.+|+++||+ |.+++++.++|+|+||+++++||.++...|++++... .+..+.+.++++.+|+.
T Consensus        22 G~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~-~~~~~~~~~l~~~~g~~  100 (476)
T 3e6i_A           22 GNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLP-AFHAHRDRGIIFNNGPT  100 (476)
T ss_dssp             BTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCG-GGGGGTTSSSTTCCSTT
T ss_pred             cChhhhccccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCc-hhheecCCCEEecCCcH
Confidence            344443 56889999999999985 8888999999999999999999998767788765443 33344445888999999


Q ss_pred             HHHHHhhhcccCCHHHH--HHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHHHHHHhHhhhhhccCCCCCCCCCCCc
Q 012536           80 WRHQRKLASYEFSTKIL--RDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDF  157 (461)
Q Consensus        80 ~~~~R~~~~~~fs~~~l--~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~  157 (461)
                      |+++|+++.+.|+...+  ..+. ..+++.++.+++.+..  ..++++|+..++..+++|+++.++||.+++..+   +.
T Consensus       101 w~~~Rr~~~~~l~~~~~~~~~~~-~~i~~~~~~l~~~l~~--~~~~~~d~~~~~~~~~~dvi~~~~fG~~~~~~~---~~  174 (476)
T 3e6i_A          101 WKDIRRFSLTTLRNYGMGKQGNE-SRIQREAHFLLEALRK--TQGQPFDPTFLIGCAPCNVIADILFRKHFDYND---EK  174 (476)
T ss_dssp             HHHHHHHHHHHHHHTC-CCSHHH-HHHHHHHHHHHHHHHT--TTTSCBCTHHHHTHHHHHHHHHHHHSCCCCTTC---HH
T ss_pred             HHHHHHHHHHHHHhcCCCchHHH-HHHHHHHHHHHHHHHH--hCCCCcChHHHHHHHHHHHHHHHHcCCCCCCCC---HH
Confidence            99999977655543222  1233 3667788888888865  345689999999999999999999999987532   11


Q ss_pred             cchHHHHhhhhhhHHHh---hhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHh
Q 012536          158 GNQFTKAFDDSNFIVYC---RYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFL  234 (461)
Q Consensus       158 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll  234 (461)
                      ...+...+.........   .....++.+..+++ ...+...+....+.+++.+.++++++..+.+    ...|+++.|+
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~lp-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----~~~d~~~~ll  249 (476)
T 3e6i_A          175 FLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLP-GSHRKVIKNVAEVKEYVSERVKEHHQSLDPN----CPRDLTDCLL  249 (476)
T ss_dssp             HHHHHHHHHHHHHHTTSHHHHHHHHSHHHHTTSC-SHHHHHHHHHHHHHHHHHHHHHHHHHTCCTT----SCCSHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcC-cHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC----CCccHHHHHH
Confidence            12333333332221111   11111121333443 2345667788889999999999888765432    2357888888


Q ss_pred             hccCC----CCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccH
Q 012536          235 LESEK----DPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTE  310 (461)
Q Consensus       235 ~~~~~----~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~  310 (461)
                      .+...    .+..++++++.+++..+++||+|||+.+++|++++|++||++|+||++|++++++.+.         .++.
T Consensus       250 ~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~---------~~~~  320 (476)
T 3e6i_A          250 VEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSR---------IPAI  320 (476)
T ss_dssp             HHHHSSSSCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTTTS---------CCCG
T ss_pred             HHHHhcccCCCCCcCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCC---------CCCh
Confidence            65422    2345899999999999999999999999999999999999999999999999987543         2588


Q ss_pred             HHhhcChHHHHHHHHhhcCCCCCCC-CCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCc
Q 012536          311 AALEKMHYLHAALSETLRLYPAVPV-DGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGV  389 (461)
Q Consensus       311 ~~l~~lp~l~a~i~E~lRl~~~~~~-~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~  389 (461)
                      +++.+||||+|||+|++|++|+++. ..|.+.+|.++ +||.|||||.|.++.+++||||++| +||++|+||||++++.
T Consensus       321 ~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d~~~~-~~p~~F~PeR~l~~~~  398 (476)
T 3e6i_A          321 KDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIF-RGYLIPKGTVVVPTLDSVLYDNQEF-PDPEKFKPEHFLNENG  398 (476)
T ss_dssp             GGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEE-TTEEECTTCEEEECSHHHHTCTTTS-SSTTSCCGGGGBCTTS
T ss_pred             hhccCCchHHHHHHHHHHhccCCCccccccCCCCeeE-cCEEeCCCCEEEechHHhhCCcccC-CCccccCchhhcCCCC
Confidence            9999999999999999999999996 56777787666 9999999999999999999999999 9999999999997322


Q ss_pred             cCCCCCCcccccCCCCCCCCChHHHHHHHHHHHHHhccceEEEeecCCCccce---eeeEEEeeCCceeeEEeeC
Q 012536          390 FRSESPYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETKEATY---RTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       390 ~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~r  461 (461)
                      . ......++|||+|+|.|+|++||++|++++++.|+++|+|++..+..+++.   ..+.+..| .+++++++||
T Consensus       399 ~-~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~R  471 (476)
T 3e6i_A          399 K-FKYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHIGFGCIP-PRYKLCVIPR  471 (476)
T ss_dssp             S-BCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCTTTCCCSCSEESSSEEC-CCCCEEEEEC
T ss_pred             C-ccCccceecCCCCCccCccHHHHHHHHHHHHHHHHHhcEeecCCCCCCCCCCcccCccccCC-CCeEEEEEec
Confidence            1 123567999999999999999999999999999999999998644333332   23444545 5799999997


No 12 
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00  E-value=4.8e-70  Score=527.93  Aligned_cols=430  Identities=17%  Similarity=0.240  Sum_probs=332.9

Q ss_pred             hhhhHHHHHHHHhcCc-EEEecCCCCeEEecChhhHHhhhhcCccccCCChhhHHHhHhh--ccCceeee-CChhHHHHH
Q 012536            9 SRLFDYQTSLAKKYRT-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWNLMRDL--FGDGIFAV-DGDKWRHQR   84 (461)
Q Consensus         9 ~~~~~~~~~~~~~yg~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~~~~~~--~g~~l~~~-~~~~~~~~R   84 (461)
                      ++++..+.+|+++||+ |.+++|++++|+|+||++++++|.++...|++++... .....  .+.++++. +|+.|+++|
T Consensus        29 ~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~-~~~~~~~~~~gl~~~~~g~~wr~~R  107 (494)
T 3swz_A           29 GHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMA-TLDIASNNRKGIAFADSGAHWQLHR  107 (494)
T ss_dssp             SCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCH-HHHHHTTTTCSSSSSCSSHHHHHHH
T ss_pred             CchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcH-HHHHhccCCCCeEeCCCCHHHHHHH
Confidence            4688999999999985 8899999999999999999999999878888876543 22222  23566555 599999999


Q ss_pred             hhhcccCCH--HHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHHHHHHhHhhhhhccCCCCCCCCCCCccchHH
Q 012536           85 KLASYEFST--KILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQFT  162 (461)
Q Consensus        85 ~~~~~~fs~--~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~  162 (461)
                      ++++++|+.  ..+..+.+ ++.+.++.+++.+..  ..+.++|+...+..+++|+|+.++||.+++..+   +....+.
T Consensus       108 r~~~~~f~~~~~~~~~~~~-~i~~~~~~l~~~l~~--~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~---~~~~~~~  181 (494)
T 3swz_A          108 RLAMATFALFKDGDQKLEK-IICQEISTLCDMLAT--HNGQSIDISFPVFVAVTNVISLICFNTSYKNGD---PELNVIQ  181 (494)
T ss_dssp             HHHHHHTTTTSSSTTCHHH-HHHHHHHHHHHHHHH--TTTEEECCHHHHHHHHHHHHHHHHHSCCCCTTC---THHHHHH
T ss_pred             HHHHHHHHHhcchHHHHHH-HHHHHHHHHHHHHHH--cCCCcccHHHHHHHHHHHHHHHHHcCCcCCCCC---HHHHHHH
Confidence            999999873  34556664 677888889988875  356789999999999999999999999885421   1111122


Q ss_pred             HHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccCC---
Q 012536          163 KAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEK---  239 (461)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~~---  239 (461)
                      ..............+..++++.++++....+...+..+.+.+++...++++++....+    ...|+++.|+++..+   
T Consensus       182 ~~~~~~~~~~~~~~~~~~~P~l~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----~~~d~l~~ll~~~~~~~~  257 (494)
T 3swz_A          182 NYNEGIIDNLSKDSLVDLVPWLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKFRSD----SITNMLDTLMQAKMNSDN  257 (494)
T ss_dssp             HHHHHHHHHHCSSSSCCSSCGGGTSCCSHHHHHHHHHHHHHHHHHHHHHHHTTTCCTT----CCCSHHHHHHHHHHTSCC
T ss_pred             HHHHHHHHhcccchHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc----chhHHHHHHHHHHHhhhc
Confidence            2111111111111111222344445544455666677777788888887776543321    346899999876421   


Q ss_pred             -------CCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHH
Q 012536          240 -------DPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAA  312 (461)
Q Consensus       240 -------~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~  312 (461)
                             ++..++++++..++..+++||+|||+.+++|++++|+.||++|+|+++||+++++..+         .++.++
T Consensus       258 ~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~---------~~~~~~  328 (494)
T 3swz_A          258 GNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSR---------TPTISD  328 (494)
T ss_dssp             C----CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSS---------CCCGGG
T ss_pred             ccccccccccccCHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCCC---------CCCHHH
Confidence                   1235899999999999999999999999999999999999999999999999997653         358899


Q ss_pred             hhcChHHHHHHHHhhcCCCCCCCC-CccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCc-c
Q 012536          313 LEKMHYLHAALSETLRLYPAVPVD-GKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGV-F  390 (461)
Q Consensus       313 l~~lp~l~a~i~E~lRl~~~~~~~-~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~-~  390 (461)
                      +.+||||+|||+|++|++|+++.. +|.+.+|.++ +||.|||||.|.++.+++||||++| +||++|+||||++++. .
T Consensus       329 ~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~PeRfl~~~~~~  406 (494)
T 3swz_A          329 RNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSI-GEFAVDKGTEVIINLWALHHNEKEW-HQPDQFMPERFLNPAGTQ  406 (494)
T ss_dssp             GGTCHHHHHHHHHHHHHSCSSTTCSCEECSSSEEE-TTEEECTTCEEEECHHHHHHCTTTS-SSTTSCCGGGGBCTTSSS
T ss_pred             HhcCHHHHHHHHHHHHhcCCcccccceecCCCceE-CCEEeCCCCEEEEehHHhhCCcccC-CCcccCCcccccCCCCcc
Confidence            999999999999999999999985 6777777776 9999999999999999999999999 9999999999997322 1


Q ss_pred             CCCCCCcccccCCCCCCCCChHHHHHHHHHHHHHhccceEEEeecCCCccc--eeeeEEEeeCCceeeEEeeC
Q 012536          391 RSESPYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETKEAT--YRTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       391 ~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~r  461 (461)
                      .......++|||+|+|.|+|++||++|++++++.||++|+|+++++...+.  ...+.+..| .+++|++++|
T Consensus       407 ~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p-~~~~v~~~~R  478 (494)
T 3swz_A          407 LISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGIPKVVFLI-DSFKVKIKVR  478 (494)
T ss_dssp             BCCCCSCCCTTCCGGGSCSCHHHHHHHHHHHHHHHHHHEEEECCSSCCCCCCSCEESSSEEC-CCCCEEEEEC
T ss_pred             ccCCCCcccCCCCCCCCCCcHHHHHHHHHHHHHHHHHhcEEeeCCCCCCCCCCCccceeecC-CCcEEEEEEc
Confidence            122356799999999999999999999999999999999999986543332  333455555 5899999988


No 13 
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00  E-value=7.4e-70  Score=520.16  Aligned_cols=428  Identities=15%  Similarity=0.232  Sum_probs=317.1

Q ss_pred             ccccchhhhhHHHHHHHHhcCc-EEEecCCCCeEEecChhhHHhhhhcCccccCCChhhHHHhHhhccCceeeeCChhHH
Q 012536            3 NLLIHFSRLFDYQTSLAKKYRT-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWNLMRDLFGDGIFAVDGDKWR   81 (461)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~yg~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~g~~l~~~~~~~~~   81 (461)
                      +++...++++.++.+++++||+ |.+.+++.++++|+||+++++|+..+...|++++.+ ..+...+|.+++ .+++.|+
T Consensus        18 ~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~-~~~~~~~g~~~~-~~~~~~~   95 (455)
T 2cib_A           18 HLEEFRTDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAY-PFMTPIFGEGVV-FDASPER   95 (455)
T ss_dssp             THHHHTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSC-GGGHHHHC------------
T ss_pred             CHHHHhhChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccch-hHHHhhcCCccc-cCcHHHH
Confidence            3444456789999999999975 778888888999999999999998765567776544 233344565654 5799999


Q ss_pred             HHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHHHHHHhHhhhhhccCCCCCCCCCCCccchH
Q 012536           82 HQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQF  161 (461)
Q Consensus        82 ~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~  161 (461)
                      ++|++++++|++++++.+.+ .+++.++.+++.+.    .++.+|+.+++..+++++++.++||.+++...  +   .++
T Consensus        96 ~~R~~~~~~f~~~~l~~~~~-~i~~~~~~l~~~~~----~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~--~---~~~  165 (455)
T 2cib_A           96 RKEMLHNAALRGEQMKGHAA-TIEDQVRRMIADWG----EAGEIDLLDFFAELTIYTSSACLIGKKFRDQL--D---GRF  165 (455)
T ss_dssp             ---------CCHHHHHHHHH-HHHHHHHHHHTTCC----SEEEEEHHHHHHHHHHHHHHHHHTCHHHHTTC--C---HHH
T ss_pred             HHHhhhccccCHHHHHHHHH-HHHHHHHHHHHHhC----CCCcEeHHHHHHHHHHHHHHHHHcCCCcchhh--h---HHH
Confidence            99999999999999999986 66778888877653    23579999999999999999999998875421  1   234


Q ss_pred             HHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccCCCC
Q 012536          162 TKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEKDP  241 (461)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~  241 (461)
                      .+.+.......     .+...+..+++.+..+...++...+.+++.+.++++++......   ...|+++.|+.+...++
T Consensus       166 ~~~~~~~~~~~-----~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~---~~~dll~~ll~~~~~~~  237 (455)
T 2cib_A          166 AKLYHELERGT-----DPLAYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANPPTDK---SDRDMLDVLIAVKAETG  237 (455)
T ss_dssp             HHHHHHHHTTC-----CGGGGTCTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCC--------CCCHHHHHHHCBCTTS
T ss_pred             HHHHHHHHhhh-----hHHHHhcccCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccCCC---CcccHHHHHHHhhhhcC
Confidence            44333322110     01000111233334455667778888999999988876532110   12389999998765444


Q ss_pred             CC-CCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcChHHH
Q 012536          242 ES-MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLH  320 (461)
Q Consensus       242 ~~-l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~  320 (461)
                      .. ++++++.+++..+++||+|||+.+++|++++|++||++|++|++|++++++...         .++.+++.+||||+
T Consensus       238 ~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~---------~~~~~~l~~lpyl~  308 (455)
T 2cib_A          238 TPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGR---------SVSFHALRQIPQLE  308 (455)
T ss_dssp             SBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGCC---------CHHHHTTSCCHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCC---------CCCHHHHhcCHHHH
Confidence            45 999999999999999999999999999999999999999999999999997642         25889999999999


Q ss_pred             HHHHHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCcccc
Q 012536          321 AALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAA  400 (461)
Q Consensus       321 a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~~  400 (461)
                      |||+|++|++|+++...|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+||||+++.......+..++|
T Consensus       309 a~i~E~lRl~p~~~~~~R~~~~d~~l-~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~l~~~~~~~~~~~~~lp  386 (455)
T 2cib_A          309 NVLKETLRLHPPLIILMRVAKGEFEV-QGHRIHEGDLVAASPAISNRIPEDF-PDPHDFVPARYEQPRQEDLLNRWTWIP  386 (455)
T ss_dssp             HHHHHHHHHSCSCCCEEEEECSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCGGGGSTTTCHHHHCTTTCCT
T ss_pred             HHHHHHHhcCCcccccceeeCCCceE-CCEEECCCCEEEEChHHhcCCcccC-CCccccCcccCCCCCcccccCCccccC
Confidence            99999999999998888888888777 9999999999999999999999999 999999999999632111112557999


Q ss_pred             cCCCCCCCCChHHHHHHHHHHHHHhccceEEEeecCCCccce-eeeEEEeeCCceeeEEeeC
Q 012536          401 FQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETKEATY-RTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       401 Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~r  461 (461)
                      ||+|+|.|+|++||++|++++++.|+++|+|+++.+..+... ....+..|.++++|++++|
T Consensus       387 FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~R  448 (455)
T 2cib_A          387 FGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPAAVRYRRR  448 (455)
T ss_dssp             TCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCEECSSSSCEECSCCEEEEEEC
T ss_pred             CCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCccccccccccccccCCCCceEEEEEC
Confidence            999999999999999999999999999999998742222211 1234556777899999987


No 14 
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00  E-value=1.1e-69  Score=522.38  Aligned_cols=434  Identities=18%  Similarity=0.240  Sum_probs=333.4

Q ss_pred             ccccc-hhhhhHHHHHHHHhcCc-EEEecCCCCeEEecChhhHHhhhhcCccccCCChhhHHHhHh-hccCceeeeCChh
Q 012536            3 NLLIH-FSRLFDYQTSLAKKYRT-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWNLMRD-LFGDGIFAVDGDK   79 (461)
Q Consensus         3 ~~~~~-~~~~~~~~~~~~~~yg~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~~~~~-~~g~~l~~~~~~~   79 (461)
                      +++.. .++++.++.+++++||+ |++.+++.++|+|+||+++++|+.++...|.+++... .+.. ..|.++++.+|+.
T Consensus        23 ~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~-~~~~~~~~~~l~~~~g~~  101 (476)
T 1po5_A           23 NLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIA-VVDPIFQGYGVIFANGER  101 (476)
T ss_dssp             TGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGG-GGCSCCSSCCCCCSSHHH
T ss_pred             cHHhccCCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcH-HHHhhcCCCceEecCCcH
Confidence            44443 57889999999999985 7777888899999999999999987656787654322 1222 2356788889999


Q ss_pred             HHHHHhhhcccCCHH--HHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHHHHHHhHhhhhhccCCCCCCCCCCCc
Q 012536           80 WRHQRKLASYEFSTK--ILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDF  157 (461)
Q Consensus        80 ~~~~R~~~~~~fs~~--~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~  157 (461)
                      |+++|+++.+.|++.  .++.+.+ .+.+.++.+++.+...  .++++|+.+++..+++|+++.++||.+++..+   ..
T Consensus       102 w~~~Rr~~~~~f~~~~~~~~~~~~-~i~~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~~~---~~  175 (476)
T 1po5_A          102 WRALRRFSLATMRDFGMGKRSVEE-RIQEEARCLVEELRKS--KGALLDNTLLFHSITSNIICSIVFGKRFDYKD---PV  175 (476)
T ss_dssp             HHHHHHHHHHHHHHSCCCHHHHHH-HHHHHHHHHHHHHHHT--TTCCBCCHHHHHHHHHHHHHHHHHSSCCCTTC---HH
T ss_pred             HHHHHHHHHHHHHHhCCChhHHHH-HHHHHHHHHHHHHHhc--CCCccCHHHHHHHHHHHHHHHHHcCCCCCCCC---HH
Confidence            999999999888766  3455664 6778889999988753  34689999999999999999999999886421   11


Q ss_pred             cchHHHHhhhhhhHHH--h-hhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHh
Q 012536          158 GNQFTKAFDDSNFIVY--C-RYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFL  234 (461)
Q Consensus       158 ~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll  234 (461)
                      ...+.+.+........  . .....++.+.++++. ..++..++.+.+.+++.+.++++++..+.+    ...|+++.|+
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~lp~-~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~----~~~d~l~~ll  250 (476)
T 1po5_A          176 FLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFPG-THRQIYRNLQEINTFIGQSVEKHRATLDPS----NPRDFIDVYL  250 (476)
T ss_dssp             HHHHHHHHHHHTTTCCTTHHHHHHHTHHHHHTSSC-SHHHHHHHHHHHHHHHHHHHHHHHTTCCTT----SCCSHHHHHH
T ss_pred             HHHHHHHHHHHHhhhcchhhHHHHhhhHHHHhcCc-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCC----CcccHHHHHH
Confidence            1233332222221100  0 001111112333432 235566778889999999999887653321    2368888888


Q ss_pred             hccC----CCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccH
Q 012536          235 LESE----KDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTE  310 (461)
Q Consensus       235 ~~~~----~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~  310 (461)
                      .+.+    ..+..++++++.+++..+++||+|||+.+++|++++|++||++|+||++||+++++..+         .++.
T Consensus       251 ~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~---------~~~~  321 (476)
T 1po5_A          251 LRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR---------PPAL  321 (476)
T ss_dssp             HHHHHHTCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSS---------CCCG
T ss_pred             HHHHhhccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCC---------CCCh
Confidence            5431    12345899999999999999999999999999999999999999999999999987532         2588


Q ss_pred             HHhhcChHHHHHHHHhhcCCCCCCC-CCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCc
Q 012536          311 AALEKMHYLHAALSETLRLYPAVPV-DGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGV  389 (461)
Q Consensus       311 ~~l~~lp~l~a~i~E~lRl~~~~~~-~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~  389 (461)
                      +++.+||||+|||+|+||++|+++. ..|.+.+|.++ +||.|||||.|.++.+++||||++| +||++|+||||++++.
T Consensus       322 ~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~g~~Ip~Gt~v~~~~~~~~rdp~~~-~dp~~F~PeR~l~~~~  399 (476)
T 1po5_A          322 DDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQF-RGYVIPKNTEVFPVLSSALHDPRYF-ETPNTFNPGHFLDANG  399 (476)
T ss_dssp             GGGGGCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEE-TTEEECTTCEEEECHHHHHTCTTTC-SSTTSCCGGGGBCTTS
T ss_pred             HHHhcCcHHHHHHHHHHHhccCCCCCCccccCCCcee-cCEecCCCCEEEeehHhHhcCcccc-CCccccCchhhCCCCC
Confidence            9999999999999999999999995 67888888776 9999999999999999999999999 9999999999996321


Q ss_pred             cCCCCCCcccccCCCCCCCCChHHHHHHHHHHHHHhccceEEEeecCCCcc--ce-eeeEEEeeCCceeeEEeeC
Q 012536          390 FRSESPYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETKEA--TY-RTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       390 ~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~r  461 (461)
                      .. .....++|||+|+|.|+|++||++|++++++.|+++|+|+++++.+.+  .. ..+.++.| .++++++++|
T Consensus       400 ~~-~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~~~v~~~~R  472 (476)
T 1po5_A          400 AL-KRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESGVGNVP-PSYQIRFLAR  472 (476)
T ss_dssp             CB-CCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECSSCGGGCCCCCCSTTSSCCC-CCCCBEEEEC
T ss_pred             Cc-cCCccccCCCCccccCcchHHHHHHHHHHHHHHHhceEEeCCCCCCCCCccCCcCceeecC-cceEEEEEec
Confidence            11 134579999999999999999999999999999999999997654322  22 33455556 6899999987


No 15 
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00  E-value=2.9e-70  Score=530.14  Aligned_cols=427  Identities=19%  Similarity=0.225  Sum_probs=335.5

Q ss_pred             hhhhhHHHHHHHHhcCc-EEEecCCCCeEEecChhhHHhhhhcCccccCCChhhHHHhHhhccC-ceeeeC-ChhHHHHH
Q 012536            8 FSRLFDYQTSLAKKYRT-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWNLMRDLFGD-GIFAVD-GDKWRHQR   84 (461)
Q Consensus         8 ~~~~~~~~~~~~~~yg~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~g~-~l~~~~-~~~~~~~R   84 (461)
                      .++++.++.+|+++||+ |++.+|+.++|+|+||+++++|+.++...|++++..........|. ++++.+ |+.|+++|
T Consensus        42 ~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~~~~~~~~~~~~~l~~~~~g~~w~~~R  121 (496)
T 3qz1_A           42 QPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPSYKLVSQRCQDISLGDYSLLWKAHK  121 (496)
T ss_dssp             SSCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCCTTTTTSCTTCCCSSSSCCSHHHHHHH
T ss_pred             CCcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCcchHHHhcCCCCceEECCCCHHHHHHH
Confidence            57899999999999985 8888999999999999999999998877788766544222222344 788888 99999999


Q ss_pred             hhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHHHHHHhHhhhhhccCCCCCCCCCCCccchHHHH
Q 012536           85 KLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKA  164 (461)
Q Consensus        85 ~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~  164 (461)
                      ++++++|+.+.++.+.+ .+++.++.+++.+..  ..++++|+..++..+++|+++.++||. .     .+.....+.+.
T Consensus       122 r~~~~~f~~~~~~~~~~-~i~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~dvi~~~~fG~-~-----~~~~~~~~~~~  192 (496)
T 3qz1_A          122 KLTRSALLLGTRSSMEP-WVDQLTQEFCERMRV--QAGAPVTIQKEFSLLTCSIICYLTFGN-K-----EDTLVHAFHDC  192 (496)
T ss_dssp             HHHHHHHHC--CCCHHH-HHHHHHHHHHHHHHT--TCSCCCHHHHHHTHHHHHHTTTTSTTC-C-----CHHHHHHHHHH
T ss_pred             HHHHHHHhhccHhhHHH-HHHHHHHHHHHHHHh--cCCCccCHHHHHHHHHHHHHHHHhcCC-C-----CChHHHHHHHH
Confidence            99999998777667775 778899999998876  456689999999999999999999998 1     11122344444


Q ss_pred             hhhhhhHHHh--hhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccCCC--
Q 012536          165 FDDSNFIVYC--RYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEKD--  240 (461)
Q Consensus       165 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~--  240 (461)
                      +.........  .....++++.++++.+..+...+..+.+.+++.+.++++++....+    ...|+++.|+++..+.  
T Consensus       193 ~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----~~~d~l~~ll~~~~~~~~  268 (496)
T 3qz1_A          193 VQDLMKTWDHWSIQILDMVPFLRFFPNPGLWRLKQAIENRDHMVEKQLRRHKESMVAG----QWRDMTDYMLQGVGRQRV  268 (496)
T ss_dssp             HHTTTTTTSSHHHHHHHHCGGGCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSS----CCSSSHHHHTTSSTTCCC
T ss_pred             HHHHHHHhccchhHHHHhHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC----CccchHHHHHHHHHhccc
Confidence            4433322111  1111222344445545566778888899999999999988765432    3468999999876432  


Q ss_pred             --C-CCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcCh
Q 012536          241 --P-ESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMH  317 (461)
Q Consensus       241 --~-~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp  317 (461)
                        + +.++++++.+++..+++||+|||+.+++|++++|++||++|+|+++|++++++......     +.+ .+++.+||
T Consensus       269 ~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~-----~~~-~~~~~~lp  342 (496)
T 3qz1_A          269 EEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCS-----RVT-YKDRARLP  342 (496)
T ss_dssp             -----CCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCSSSSSS-----CCS-TTGGGSCH
T ss_pred             cCCcccccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCcccC-----CCC-hhhhhcCc
Confidence              1 26999999999999999999999999999999999999999999999999997632100     224 78899999


Q ss_pred             HHHHHHHHhhcCCCCCCC-CCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCC
Q 012536          318 YLHAALSETLRLYPAVPV-DGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPY  396 (461)
Q Consensus       318 ~l~a~i~E~lRl~~~~~~-~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~  396 (461)
                      ||+|||+|++|++|+++. .+|.+.+|.++ +||.|||||.|.++.+++||||++| +||++|+||||++++     ...
T Consensus       343 yl~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~PeR~l~~~-----~~~  415 (496)
T 3qz1_A          343 LLNATIAEVLRLRPVVPLALPHRTTRPSSI-FGYDIPEGMVVIPNLQGAHLDETVW-EQPHEFRPDRFLEPG-----ANP  415 (496)
T ss_dssp             HHHHHHHHHHHHSCSSSSCCCEECSSCEEC-SSSEECTTCEEEECHHHHTTCTTTS-SSTTSCCCCCCC--------CCC
T ss_pred             HHHHHHHHHHHhcCCcccccCccCCCCceE-CCEEeCCCCEEEechHHhhCChhhc-CCcccCCcccccCCC-----CCc
Confidence            999999999999999997 46778777766 9999999999999999999999999 999999999999732     123


Q ss_pred             cccccCCCCCCCCChHHHHHHHHHHHHHhccceEEEeecCCCcc--cee--eeEEEeeCCceeeEEeeC
Q 012536          397 KFAAFQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETKEA--TYR--TMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       397 ~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~r  461 (461)
                      .++|||+|+|+|+|++||++|++++++.|+++|+|++++++..+  ...  .+.+..| .+++++++||
T Consensus       416 ~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~R  483 (496)
T 3qz1_A          416 SALAFGCGARVCLGESLARLELFVVLARLLQAFTLLPPPVGALPSLQPDPYCGVNLKV-QPFQVRLQPR  483 (496)
T ss_dssp             CCCSSCCSSSSCSSHHHHHHHHHHHHHHHHHHCCCCCCTTCCCCCSCCSCCCSSCCCC-CCCCCCCCCC
T ss_pred             CccCCCCCCCCCccHHHHHHHHHHHHHHHHHhcEEeCCCCCCCCCCCcccCcceEecC-CceEEEEEEe
Confidence            78999999999999999999999999999999999988543222  222  2445555 4899999887


No 16 
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00  E-value=4.7e-69  Score=518.30  Aligned_cols=427  Identities=21%  Similarity=0.260  Sum_probs=329.0

Q ss_pred             hhHHHHHHHHhcCc-EEEecCCCCeEEecChhhHHhhhhcCccccCCChhhHHHhHhhc-cCc-eeeeCChhHHHHHhhh
Q 012536           11 LFDYQTSLAKKYRT-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWNLMRDLF-GDG-IFAVDGDKWRHQRKLA   87 (461)
Q Consensus        11 ~~~~~~~~~~~yg~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~-g~~-l~~~~~~~~~~~R~~~   87 (461)
                      ++.++.+++++||+ |.+.+++.++++|+||+++++|+.++...|++++... .+..+. +.+ +++.+++.|+++|+++
T Consensus        36 ~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~-~~~~~~~~~~~~~~~~g~~w~~~R~~~  114 (481)
T 3czh_A           36 PHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLP-LFMKMTKMGGLLNSRYGRGWVDHRRLA  114 (481)
T ss_dssp             HHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCH-HHHHHHTTCSSTTCCSSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcH-HHHhhcCCCCeEeCCCChHHHHHHHHH
Confidence            88999999999985 7778888889999999999999998766788765332 222222 246 4457899999999999


Q ss_pred             cccCCHHHH--HHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHHHHHHhHhhhhhccCCCCCCCCCCCccchHHHHh
Q 012536           88 SYEFSTKIL--RDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKAF  165 (461)
Q Consensus        88 ~~~fs~~~l--~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~  165 (461)
                      +++|++..+  ..+.+ .+++.++.+++.+...  +++++|+.+.+..+++|+++.++||.+++..   ++....+.+.+
T Consensus       115 ~~~f~~~~~~~~~~~~-~i~~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~~---~~~~~~~~~~~  188 (481)
T 3czh_A          115 VNSFRYFGYGQKSFES-KILEETKFFNDAIETY--KGRPFDFKQLITNAVSNITNLIIFGERFTYE---DTDFQHMIELF  188 (481)
T ss_dssp             HHHHHHTTTTSTTHHH-HHHHHHHHHHHHHHTT--TTCCBCCHHHHHHHHHHHHHHHHHSSCCCTT---CHHHHHHHHHH
T ss_pred             HHHHHHhcCChHHHHH-HHHHHHHHHHHHHHHc--CCCCcCHHHHHHHHHHHHHHHHHcCCCCCCC---CHHHHHHHHHH
Confidence            999876543  45554 6778888999888752  3557999999999999999999999987632   11123333333


Q ss_pred             hhhhhHHHhhh--hhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccC----C
Q 012536          166 DDSNFIVYCRY--VDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESE----K  239 (461)
Q Consensus       166 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~----~  239 (461)
                      ...........  ...++++.++++....+...++...+.+++.+.++++++..+.+    ...|+++.|+.+..    +
T Consensus       189 ~~~~~~~~~~~~~~~~~~p~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~----~~~d~l~~ll~~~~~~~~~  264 (481)
T 3czh_A          189 SENVELAASASVFLYNAFPWIGILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQ----LPQHFVDAYLDEMDQGKND  264 (481)
T ss_dssp             HHHHHHTTSHHHHHHHHCGGGGGCSSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCTT----CCSSHHHHHHHHHHHTTTC
T ss_pred             HHHHhhhccchhHHhhhhHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC----chHHHHHHHHHHHHhcccC
Confidence            33222111000  11112222334433456677788889999999999887653321    34689999987642    1


Q ss_pred             CCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcChHH
Q 012536          240 DPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYL  319 (461)
Q Consensus       240 ~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l  319 (461)
                      ++..++++++.+++..+++||+|||+.+++|++++|++||++|+||++|++++++..+         .++.+++.+||||
T Consensus       265 ~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~---------~~~~~~~~~lpyl  335 (481)
T 3czh_A          265 PSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNG---------KPSWDDKCKMPYT  335 (481)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSS---------CCCGGGGGGCHHH
T ss_pred             ccccccHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCCC---------CCChhhhhhChHH
Confidence            2346999999999999999999999999999999999999999999999999987542         2588999999999


Q ss_pred             HHHHHHhhcCCCCCCC-CCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCcc
Q 012536          320 HAALSETLRLYPAVPV-DGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKF  398 (461)
Q Consensus       320 ~a~i~E~lRl~~~~~~-~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~  398 (461)
                      +|||+|++|++|+++. ..|.+.+|.++ +||.|||||.|.++.+++||||++| +||++|+||||++++.. ......+
T Consensus       336 ~a~i~E~lRl~p~~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~l~~~~~-~~~~~~~  412 (481)
T 3czh_A          336 EAVLHEVLRFCNIVPLGIFHATSEDAVV-RGYSIPKGTTVITNLYSVHFDEKYW-RDPEVFHPERFLDSSGY-FAKKEAL  412 (481)
T ss_dssp             HHHHHHHHHHHCSSTTCSCEECSSCEEE-TTEEECTTCEEEEEHHHHHTCTTTC-SSTTSCCGGGGBCTTSC-BCCCTTC
T ss_pred             HHHHHHHHhhccccccCcceeecCCeEE-eCEEcCCCCEEEechHHHhCCcccC-CCccccCCCceeCCCCC-CcCCcce
Confidence            9999999999999995 57888888776 9999999999999999999999999 99999999999963211 1345679


Q ss_pred             cccCCCCCCCCChHHHHHHHHHHHHHhccceEEEeecCCC-ccceeeeEEEeeCCceeeEEeeC
Q 012536          399 AAFQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETK-EATYRTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       399 ~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r  461 (461)
                      +|||+|+|.|+|++||++|++++++.|+++|+++++++.. +.....+.+..|. ++.+.++||
T Consensus       413 lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~  475 (481)
T 3czh_A          413 VPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQPQ-PYLICAERR  475 (481)
T ss_dssp             CTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECGGGCCCCCCCCSSSSCCCC-CCCBEEEEC
T ss_pred             eCCCCCCCCCCCHHHHHHHHHHHHHHHHHheEEeCCCCCCCCcccCCCceecCC-ceEEEEEec
Confidence            9999999999999999999999999999999999876432 1222234444443 688888887


No 17 
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00  E-value=2e-69  Score=521.12  Aligned_cols=429  Identities=19%  Similarity=0.232  Sum_probs=328.8

Q ss_pred             hhhhhHHHHHHHHhcCc-EEEecCCCCeEEecChhhHHhhhhcCccccCCChhhHHHhHh-hccCceeeeCChhHHHHHh
Q 012536            8 FSRLFDYQTSLAKKYRT-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWNLMRD-LFGDGIFAVDGDKWRHQRK   85 (461)
Q Consensus         8 ~~~~~~~~~~~~~~yg~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~~~~~-~~g~~l~~~~~~~~~~~R~   85 (461)
                      .++++.++.+++++||+ |++.+++.++|+|+||+++++|+.++...|.+++... .+.. ..|.++++.+++.|+++|+
T Consensus        30 ~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~-~~~~~~~~~~l~~~~g~~w~~~Rr  108 (477)
T 1r9o_A           30 IKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFP-LAERANRGFGIVFSNGKKWKEIRR  108 (477)
T ss_dssp             HHHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCS-CCCTTTCTTSSTTCCHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcch-hhhhccCCCceEecCChHHHHHHH
Confidence            57889999999999985 7777888899999999999999977656777644321 1111 2356788889999999999


Q ss_pred             hhcccCCHH--HHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHHHHHHhHhhhhhccCCCCCCCCCCCccchHHH
Q 012536           86 LASYEFSTK--ILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTK  163 (461)
Q Consensus        86 ~~~~~fs~~--~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~  163 (461)
                      ++.+.|++.  .++.+.+ .+.+.++.+++.+...  .++++|+.+++..+++|+++.++||.+++..+   .....+.+
T Consensus       109 ~~~~~~~~~~~~~~~~~~-~i~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~---~~~~~~~~  182 (477)
T 1r9o_A          109 FSLMTLRNFGMGKRSIED-RVQEEARCLVEELRKT--KASPCDPTFILGCAPCNVICSIIFHKRFDYKD---QQFLNLME  182 (477)
T ss_dssp             HHHHHHTTSSSCSSCHHH-HHHHHHHHHHHHHHTT--TTSCBCTHHHHHHHHHHHHHHHHHSCCCCTTC---HHHHHHHH
T ss_pred             HHHHHHHHhCCChHHHHH-HHHHHHHHHHHHHHhc--CCCccChHHHHHHHHHHHHHHHHccCcCCCCC---HHHHHHHH
Confidence            999888876  3345564 6778889999888652  34679999999999999999999999886421   11123333


Q ss_pred             HhhhhhhHHHhh--hhhHHHHH-HHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccC--
Q 012536          164 AFDDSNFIVYCR--YVDVFWEL-KRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESE--  238 (461)
Q Consensus       164 ~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~--  238 (461)
                      .+..........  ....++++ .++++. ..++..++...+.+++.+.++++++..+.+    ...|+++.|+....  
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~p~l~~~lp~-~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~----~~~d~l~~ll~~~~~~  257 (477)
T 1r9o_A          183 KLNENIKILSSPWIQICNNFSPIIDYFPG-THNKLLKNVAFMKSYILEKVKEHQESMDMN----NPQDFIDCFLMKMEKE  257 (477)
T ss_dssp             HHHHHHHHHTCCBC-------CCCSCCTT-CHHHHHHHHHHHHHHHHHHHHHHHHTCCTT----CCCSHHHHHHHHHHHH
T ss_pred             HHHHHHHhhccchhHHHhhccHHHHhcch-HHHHHHHHHHHHHHHHHHHHHHHHhccCCC----CchHHHHHHHHHHHhh
Confidence            322222111000  00111111 222222 235566778888999999999988753321    33689888885421  


Q ss_pred             --CCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcC
Q 012536          239 --KDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKM  316 (461)
Q Consensus       239 --~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (461)
                        ..+..++++++.+++..+++||+|||+.+++|++++|++||++|+||++||+++++...         .++.+++.+|
T Consensus       258 ~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~---------~~~~~~~~~l  328 (477)
T 1r9o_A          258 KHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNR---------SPCMQDRSHM  328 (477)
T ss_dssp             TTSCSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSS---------CCCGGGGGGC
T ss_pred             hccCCCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCCC---------CCChHhhccC
Confidence              12346999999999999999999999999999999999999999999999999987542         2588899999


Q ss_pred             hHHHHHHHHhhcCCCCCCC-CCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCC
Q 012536          317 HYLHAALSETLRLYPAVPV-DGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESP  395 (461)
Q Consensus       317 p~l~a~i~E~lRl~~~~~~-~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~  395 (461)
                      |||+|||+|+||++|+++. ..|.+.+|.++ +||.||+||.|.++.+++||||++| +||++|+||||++++... ...
T Consensus       329 pyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~g~~Ip~Gt~V~~~~~~~~rd~~~~-~dP~~F~PeR~l~~~~~~-~~~  405 (477)
T 1r9o_A          329 PYTDAVVHEVQRYIDLLPTSLPHAVTCDIKF-RNYLIPKGTTILISLTSVLHDNKEF-PNPEMFDPHHFLDEGGNF-KKS  405 (477)
T ss_dssp             HHHHHHHHHHHHHHTSSTTCSCEECSSCEEE-TTEEECTTCEEEECSHHHHTCTTTS-SSTTSCCGGGGBCTTSCB-CCC
T ss_pred             cHHHHHHHHHHHhcCCCCCCCceeccCCccc-cceecCCCCEEEEecHHhhCCcccC-CCccccCccceECCCCCc-Ccc
Confidence            9999999999999999995 67888888666 9999999999999999999999999 999999999999632111 135


Q ss_pred             CcccccCCCCCCCCChHHHHHHHHHHHHHhccceEEEeecCCCcc--ce-eeeEEEeeCCceeeEEeeC
Q 012536          396 YKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETKEA--TY-RTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       396 ~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~r  461 (461)
                      ..++|||+|+|.|+|++||++|++++++.|+++|+|+++++.+.+  .. ..+.++.| .++++++++|
T Consensus       406 ~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~R  473 (477)
T 1r9o_A          406 KYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTTPVVNGFASVP-PFYQLCFIPI  473 (477)
T ss_dssp             TTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCCCBCCSSSCBC-CCCCEEEEEC
T ss_pred             ccccCCCCccCCCCCHHHHHHHHHHHHHHHHHhcEEecCCCCCCCCccCCcCceeecC-CCeEEEEEEe
Confidence            579999999999999999999999999999999999997654322  22 33445556 6899999987


No 18 
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=100.00  E-value=4.4e-69  Score=515.68  Aligned_cols=425  Identities=16%  Similarity=0.226  Sum_probs=344.4

Q ss_pred             cccccchhhhhHHHHHHHHhcC-c-EEEecCCCCeEEecChhhHHhhhhcCccccCCChhhHHHhHhhccCceee-eCCh
Q 012536            2 LNLLIHFSRLFDYQTSLAKKYR-T-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWNLMRDLFGDGIFA-VDGD   78 (461)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~yg-~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~g~~l~~-~~~~   78 (461)
                      ++++...++++.++.+++++|| + |.+.++++++|+|+||+++++++.++...|++++.+. .+...+|.+++. .+++
T Consensus        16 G~~~~~~~~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~   94 (450)
T 3gw9_A           16 GHIIQFGKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYS-FMVPVFGEGVAYAAPYP   94 (450)
T ss_dssp             BTHHHHHHCHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGG-GGHHHHCTTSGGGSCHH
T ss_pred             ccHHHHccCHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHH-HHHHHhcCCcccCCCcH
Confidence            4555666789999999999998 5 8888999999999999999999998877788776544 455667877654 5799


Q ss_pred             hHHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHH-HHHHhcccCCceeHHHhHHHHHHhHhhhhhccCCCCCCCCCCCc
Q 012536           79 KWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTS-KFSVAAAAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDF  157 (461)
Q Consensus        79 ~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~-~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~  157 (461)
                      .|+++|++++++|+++.++.+.+ .+.+.++.+++ .+.+   .++.+|+.+++..+++++++.++||.+++...+    
T Consensus        95 ~~~~~R~~~~~~f~~~~l~~~~~-~i~~~~~~ll~~~~~~---~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~----  166 (450)
T 3gw9_A           95 RMREQLNFLAEELTIAKFQNFVP-AIQHEVRKFMAANWDK---DEGEINLLEDCSTMIINTACQCLFGEDLRKRLD----  166 (450)
T ss_dssp             HHHHHHHHHHHTTSGGGCTTHHH-HHHHHHHHHHHHHSCS---SEEEEEHHHHHHHHHHHHHHHHHSCHHHHHHSC----
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHhcc---CCCcccHHHHHHHHHHHHHHHHHcCcchhhhhh----
Confidence            99999999999999999999886 66777777777 5432   345799999999999999999999988754221    


Q ss_pred             cchHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhcc
Q 012536          158 GNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES  237 (461)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~  237 (461)
                      ...+.+.+.......  .....++++..+++.+..+...++...+.+++.+.++++++.....+  ....|+++.|+++.
T Consensus       167 ~~~~~~~~~~~~~~~--~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~--~~~~d~l~~ll~~~  242 (450)
T 3gw9_A          167 ARRFAQLLAKMESSL--IPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEVNKD--SSTSDLLSGLLSAV  242 (450)
T ss_dssp             HHHHHHHHHHHHHTC--CGGGGTCGGGGGSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS--CCCCSHHHHHHHCB
T ss_pred             hHHHHHHHHHHHhcc--ccchhcccchhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccC--CccchHHHHHHHhh
Confidence            133444433332111  11111223334555555667778888999999999998876532211  25579999999987


Q ss_pred             CCCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHh--cChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHh-h
Q 012536          238 EKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLC--KHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAAL-E  314 (461)
Q Consensus       238 ~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~--~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l-~  314 (461)
                      .+++..++++++.+++..+++||+|||+.+++|++++|+  .||++|+++++|++++ +           +.++.+++ .
T Consensus       243 ~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~~~p~~~~~l~~Ei~~~-~-----------~~~~~~~~~~  310 (450)
T 3gw9_A          243 YRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEF-P-----------AQLNYNNVMD  310 (450)
T ss_dssp             CTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHTTC-C-----------SSCCHHHHHH
T ss_pred             ccCCCCCCHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHcCCcchhHHHHHHHHHHhc-c-----------CCCChHHHHH
Confidence            666667999999999999999999999999999999999  9999999999999987 1           12588888 9


Q ss_pred             cChHHHHHHHHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCC
Q 012536          315 KMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSES  394 (461)
Q Consensus       315 ~lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~  394 (461)
                      +||||+|||+|++|++|+++...|.+.+|.++ +||.|||||.|.++.+++||||++| +||++|+|||+..       .
T Consensus       311 ~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~PeR~~~-------~  381 (450)
T 3gw9_A          311 EMPFAERCARESIRRDPPLLMLMRKVMADVKV-GSYVVPKGDIIACSPLLSHHDEEAF-PEPRRWDPERDEK-------V  381 (450)
T ss_dssp             HCHHHHHHHHHHHHHSCSCCCEEEEECSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCCCS-------S
T ss_pred             hcHHHHHHHHHHHHhCCchhcccccccccccc-CCEEECCCCEEEEChHHhhCChhhc-CCccccCCCcCcC-------C
Confidence            99999999999999999999888888888777 9999999999999999999999999 9999999999421       2


Q ss_pred             CCcccccCCCCCCCCChHHHHHHHHHHHHHhccceEEEeecCCC-ccceeeeEEEeeC-CceeeEEeeC
Q 012536          395 PYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETK-EATYRTMFTLHVD-KGLHLYAYPR  461 (461)
Q Consensus       395 ~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~r  461 (461)
                      +..++|||+|+|.|+|++||++|++++++.|+++|||++++++. +..+ ...+..|. .+++|++++|
T Consensus       382 ~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~-~~~~~~p~~~~~~v~~~~R  449 (450)
T 3gw9_A          382 EGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDPDY-HTMVVGPTASQCRVKYIRR  449 (450)
T ss_dssp             TTCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHEEEEESSSSCCCEET-TSSSCEECGGGCEEEEEEC
T ss_pred             CCceeCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEecCCCCCCCcc-ccceecCCCCceEeEeeec
Confidence            46799999999999999999999999999999999999985432 2222 23556677 7999999987


No 19 
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00  E-value=1.2e-69  Score=524.59  Aligned_cols=436  Identities=19%  Similarity=0.223  Sum_probs=330.4

Q ss_pred             cccchhhhhHHHHHHHHhcCc-EEEecCCCCeEEecChhhHHhhhhcCccccCCChhhHHHhHhh-ccCceeee--CChh
Q 012536            4 LLIHFSRLFDYQTSLAKKYRT-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWNLMRDL-FGDGIFAV--DGDK   79 (461)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~yg~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~~~~~~-~g~~l~~~--~~~~   79 (461)
                      ++...++++.++.+++++||+ |.+++++.++|+++||+++++|+.++...|++++... .+... .|.++++.  +++.
T Consensus        30 ~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~-~~~~~~~~~~l~~~~~~g~~  108 (495)
T 2hi4_A           30 VLTLGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLY-TSTLITDGQSLTFSTDSGPV  108 (495)
T ss_dssp             HHHHTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCH-HHHTSTTSCCTTTSSCCSHH
T ss_pred             HHhcCccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcH-HHHHhcCCCCEEEcCCCChH
Confidence            333346789999999999985 7778899999999999999999998766788655433 22222 24677766  6999


Q ss_pred             HHHHHhhhcccCCH---HHH---H---HhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHHHHHHhHhhhhhccCCCCC
Q 012536           80 WRHQRKLASYEFST---KIL---R---DFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLLKSSLDSIFKVGFGVELNS  150 (461)
Q Consensus        80 ~~~~R~~~~~~fs~---~~l---~---~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~  150 (461)
                      |+++|++++++|+.   ..+   .   .+.+ .+++.++.+++.+.....+++++|+...+..+++|+++.++||.+++.
T Consensus       109 w~~~Rr~~~~~f~~~s~~~~~~~~~~~~~~~-~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~~~dvi~~~~fG~~~~~  187 (495)
T 2hi4_A          109 WAARRRLAQNALNTFSIASDPASSSSCYLEE-HVSKEAKALISRLQELMAGPGHFDPYNQVVVSVANVIGAMCFGQHFPE  187 (495)
T ss_dssp             HHHHHHHHHHHHHHTTTSBCSSCSSCBHHHH-HHHHHHHHHHHHHHHHHHTTSCBCHHHHHHHHHHHHHHHHHHGGGSCT
T ss_pred             HHHHHHHHHHHHHHhccCcccccchhhhHHH-HHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHHHcCCCCCC
Confidence            99999999987542   222   1   4553 677888999998876444566899999999999999999999998763


Q ss_pred             CCCCCCccchHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHH
Q 012536          151 LSGSDDFGNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDIL  230 (461)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  230 (461)
                      .+   +....+.+.+..............++++.++++....+...++...+.+++.+.++++++..+.+    ...|++
T Consensus       188 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~----~~~d~l  260 (495)
T 2hi4_A          188 SS---DEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFNQRFLWFLQKTVQEHYQDFDKN----SVRDIT  260 (495)
T ss_dssp             TC---HHHHHHHTTTHHHHTTSSTTCGGGTCGGGGGSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTT----CCCSHH
T ss_pred             CC---HHHHHHHHHHHHHHHhcccchHHHHhHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHhhccc----ccccHH
Confidence            21   11122222222221111000011112223344444456677788889999999999988753321    346899


Q ss_pred             HHHhhccC----CCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhh
Q 012536          231 SRFLLESE----KDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAK  306 (461)
Q Consensus       231 ~~ll~~~~----~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~  306 (461)
                      +.|+.+..    +++..++++++.+++..+++||+|||+.+++|++++|++||++|+||++||+++++.++         
T Consensus       261 ~~ll~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~---------  331 (495)
T 2hi4_A          261 GALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRER---------  331 (495)
T ss_dssp             HHHHHHHHHCCEETTEECCTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTTSS---------
T ss_pred             HHHHHHhhhccCccccCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHhcCCCC---------
Confidence            99986421    11235899999999999999999999999999999999999999999999999987542         


Q ss_pred             cccHHHhhcChHHHHHHHHhhcCCCCCCC-CCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcC
Q 012536          307 LVTEAALEKMHYLHAALSETLRLYPAVPV-DGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWL  385 (461)
Q Consensus       307 ~~~~~~l~~lp~l~a~i~E~lRl~~~~~~-~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~  385 (461)
                      .++.+++.+||||+|||+|+||++|+++. .+|.+.+|.++ +||.|||||.|.++.+++||||++| +||++|+||||+
T Consensus       332 ~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeRfl  409 (495)
T 2hi4_A          332 RPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTL-NGFYIPKKCCVFVNQWQVNHDPELW-EDPSEFRPERFL  409 (495)
T ss_dssp             CCCGGGSTTCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEE-TTEEECTTCEEEEBHHHHHHCTTTC-SSTTSCCGGGGB
T ss_pred             CCChHHhccCHHHHHHHHHHHHccCCccCCCccccCCCeeE-eCeEECCCCEEEeChHHhhCCcccC-CCcCccCccccc
Confidence            25888999999999999999999999996 57888888776 9999999999999999999999999 999999999999


Q ss_pred             CCCcc--CCCCCCcccccCCCCCCCCChHHHHHHHHHHHHHhccceEEEeecCCC-ccceeeeEEEeeCCce-eeEEeeC
Q 012536          386 VNGVF--RSESPYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETK-EATYRTMFTLHVDKGL-HLYAYPR  461 (461)
Q Consensus       386 ~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~r  461 (461)
                      +++..  .......++|||+|+|.|+|++||++|++++++.|+++|+|++.++.. +.....+.+..|. ++ +++++ |
T Consensus       410 ~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p~-~~~~v~~~-R  487 (495)
T 2hi4_A          410 TADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTPIYGLTMKHA-RCEHVQAR-R  487 (495)
T ss_dssp             CTTSSSBCHHHHTTCCCSCCGGGCCTTHHHHHHHHHHHHHHHHHHCEEECCTTCCCCCCCBCSSSCBCC-CCCCBEEE-C
T ss_pred             CCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEeCCCCCCCCccccCCceecCC-CcceEEEE-E
Confidence            63211  001245789999999999999999999999999999999999876532 2223334455555 45 78777 6


No 20 
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00  E-value=1.4e-67  Score=512.30  Aligned_cols=417  Identities=20%  Similarity=0.284  Sum_probs=332.6

Q ss_pred             hhhHHHHHHHHhcCc-EEEecCCCCeEEecChhhHHhhhhcCccccCCChhhHHHh--HhhccCce-eeeCChhHHHHHh
Q 012536           10 RLFDYQTSLAKKYRT-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWNLM--RDLFGDGI-FAVDGDKWRHQRK   85 (461)
Q Consensus        10 ~~~~~~~~~~~~yg~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~~~--~~~~g~~l-~~~~~~~~~~~R~   85 (461)
                      .++..+.+|+++||+ |++++|++++|+|+||++++++++.+  .|+.++......  ....|.++ +..+++.|+++|+
T Consensus        69 ~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~~--~~~~r~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr  146 (503)
T 3s79_A           69 GIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKHN--HYSSRFGSKLGLQCIGMHEKGIIFNNNPELWKTTRP  146 (503)
T ss_dssp             CHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHHSG--GGCCCCCCHHHHHHHTCTTSSSTTCCCHHHHHHHHH
T ss_pred             chhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHhcC--CCCCcchhhhhhhhhccCCCceeeCCCccHHHHHHH
Confidence            345678899999985 89999999999999999999999763  566543222111  12334564 5567999999999


Q ss_pred             hhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHHHHHHhHhhhhhccCCCCCCCCCCCccchHHHHh
Q 012536           86 LASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKAF  165 (461)
Q Consensus        86 ~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~  165 (461)
                      +++++|+...++.+.+ .+.+.++.+++.+.+..+.++.+|+.+++..+++|+++.++||.+++.        .++.+.+
T Consensus       147 ~~~~~f~~~~l~~~~~-~~~~~~~~~l~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~--------~~~~~~~  217 (503)
T 3s79_A          147 FFMKALSGPGLVRMVT-VCAESLKTHLDRLEEVTNESGYVDVLTLLRRVMLDTSNTLFLRIPLDE--------SAIVVKI  217 (503)
T ss_dssp             HHHHHTSTHHHHHHHH-HHHHHHHHHHTTGGGTBCTTSCBCHHHHHHHHHHHHHHHHHTCCCCCH--------HHHHHHH
T ss_pred             hhhHhhChHHHHHHHH-HHHHHHHHHHHHHHHHhcCCCeEcHHHHHHHHHHHHHHHHHcCcccCc--------hhHHHHH
Confidence            9999999999999885 667778888877766545567899999999999999999999988742        2333333


Q ss_pred             hhhhhHHHhhhh-hHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccCCCCCCC
Q 012536          166 DDSNFIVYCRYV-DVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEKDPESM  244 (461)
Q Consensus       166 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~l  244 (461)
                      ............ ..++..   ++ ...+...++.+.+.+++.+.++++++..+.++..+...|+++.|+++.++  +.+
T Consensus       218 ~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~--~~l  291 (503)
T 3s79_A          218 QGYFDAWQALLIKPDIFFK---IS-WLYKKYEKSVKDLKDAIEVLIAEKRRRISTEEKLEECMDFATELILAEKR--GDL  291 (503)
T ss_dssp             HHHHHHHHHHTTCCHHHHH---SG-GGTHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTTTTTCCHHHHHHHHHHT--TSS
T ss_pred             HHHHHHHHHHhcCcHHHhh---cc-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchHHHHHHHHHHhccc--CCC
Confidence            333222211111 111111   11 12355677888899999999999887655432212335899999987532  359


Q ss_pred             CHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcChHHHHHHH
Q 012536          245 TDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLHAALS  324 (461)
Q Consensus       245 ~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~  324 (461)
                      +++++.+++..+++||+|||+.+++|++++|++||++|+|+++||+++++..          .++.+++.+||||+|||+
T Consensus       292 ~~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~----------~~~~~~~~~lpyl~avi~  361 (503)
T 3s79_A          292 TRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGER----------DIKIDDIQKLKVMENFIY  361 (503)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTTS----------CCCHHHHTTCHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC----------CCCHHHHhcCHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999832          269999999999999999


Q ss_pred             HhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCcccccCCC
Q 012536          325 ETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAG  404 (461)
Q Consensus       325 E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~~Fg~G  404 (461)
                      |++|++|+++...|++.+|+++ +||.|||||.|.++.+++||| ++| +||++|+||||+++     .....++|||+|
T Consensus       362 E~lRl~p~~~~~~r~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d-~~~-~dp~~F~PeRf~~~-----~~~~~~~pFg~G  433 (503)
T 3s79_A          362 ESMRYQPVVDLVMRKALEDDVI-DGYPVKKGTNIILNIGRMHRL-EFF-PKPNEFTLENFAKN-----VPYRYFQPFGFG  433 (503)
T ss_dssp             HHHHHSCSSCCEEEECSSCEEE-TTEEECTTCEEEECHHHHTTT-SSC-SSTTSCCGGGGSSC-----CCTTTCCSSCCS
T ss_pred             hhhccCCCcccccccccCCeeE-CCEEECCCCEEEeehHHhCCC-ccC-CChhhCChhhcCCC-----CCcccccCCCCC
Confidence            9999999999999998888877 999999999999999999998 999 99999999999862     124579999999


Q ss_pred             CCCCCChHHHHHHHHHHHHHhccceEEEeecCCC--ccceeeeEEEeeCCc---eeeEEeeC
Q 012536          405 PRICPGKEFAYRQMKILAAVLLQFFRFKLVDETK--EATYRTMFTLHVDKG---LHLYAYPR  461 (461)
Q Consensus       405 ~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~---~~~~~~~r  461 (461)
                      +|.|+|++||.+|++++++.|+++|+|+++++..  +.....+.+..|.++   ++|+++||
T Consensus       434 ~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~v~~~~R  495 (503)
T 3s79_A          434 PRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLSLHPDETKNMLEMIFTPR  495 (503)
T ss_dssp             TTSCTTHHHHHHHHHHHHHHHHTTEEEEESTTCCTTTSCEEESSSEEECTTSCCCCEEEEEC
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCCCccccccccceeecCCCccceeeEEeccC
Confidence            9999999999999999999999999999987643  334455677788875   99999998


No 21 
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00  E-value=2.8e-68  Score=511.08  Aligned_cols=425  Identities=18%  Similarity=0.311  Sum_probs=341.6

Q ss_pred             cccccchhhhhHHHHHHHHhcC-cEEEecCCCCeEEecChhhHHhhhhcCccccCCChhhHHHhHhhccCceeee-CChh
Q 012536            2 LNLLIHFSRLFDYQTSLAKKYR-TFRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWNLMRDLFGDGIFAV-DGDK   79 (461)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~yg-~~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~g~~l~~~-~~~~   79 (461)
                      ++++...++++.++.+++++|| +|.+.++|+++|+|++|+++++++.++...|.++..+......++|.+++.. +++.
T Consensus        24 G~l~~~~~~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~g~~  103 (461)
T 3i3k_A           24 GHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTPVFGKGVAYDVPNPV  103 (461)
T ss_dssp             BTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHHHHHCTTSGGGSCHHH
T ss_pred             ccHHhhccCHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccchHHHHhhhhhcCCeeeeCCCcHH
Confidence            4555566789999999999998 5888899999999999999999999876677776655555566678887654 7899


Q ss_pred             HHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHHHHHHhHhhhhhccCCCCCCCCCCCccc
Q 012536           80 WRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGN  159 (461)
Q Consensus        80 ~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~  159 (461)
                      |+++|+++.+.|+.+.++.+.+ ++.+.++.+++.+.    .+..+|+.+.+..+++++++.++||.++....  .   .
T Consensus       104 w~~~Rr~~~~~f~~~~l~~~~~-~~~~~~~~ll~~l~----~~~~~dl~~~~~~~~~~~~~~~~~G~~~~~~~--~---~  173 (461)
T 3i3k_A          104 FLEQKKMLKSGLNIAHFKQHVS-IIEKETKEYFESWG----ESGEKNVFEALSELIILTASHCLHGKEIRSQL--N---E  173 (461)
T ss_dssp             HHHHHHHHHHHSSHHHHHHHHH-HHHHHHHHHGGGGC----SEEEEEHHHHHHHHHHHHHHHHHTCHHHHHTC--C---H
T ss_pred             HHHHHHHHhhhhCHHHHHHHHH-HHHHHHHHHHHHhh----hcCCcCHHHHHHHHHHHHHHHHHccHhhhhHH--H---H
Confidence            9999999999999999999885 66777777777653    23468999999999999999999997764321  1   2


Q ss_pred             hHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccCC
Q 012536          160 QFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEK  239 (461)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~~  239 (461)
                      .+.+.+.....    ......+.++.+++.+..++..++.+.+.+++.+.++++++...      ...|+++.++++..+
T Consensus       174 ~~~~~~~~~~~----~~~~~~~~~P~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~d~l~~ll~~~~~  243 (461)
T 3i3k_A          174 KVAQLYADLDG----GFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQSQE------KIDDILQTLLDATYK  243 (461)
T ss_dssp             HHHHHHHHHHT----TSSHHHHHSCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCC------CCCSHHHHHHTCBCT
T ss_pred             HHHHHHHHHHh----ccccchhhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc------ccccHHHHHHHhhhc
Confidence            22222222211    11111122334555555667778888888899888888765432      457899999988766


Q ss_pred             CCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcChHH
Q 012536          240 DPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYL  319 (461)
Q Consensus       240 ~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l  319 (461)
                      ++..+++++++.++..+++||+|||+.+++|++++|++||++|+++++|++++++....        .++.+++.++|||
T Consensus       244 ~~~~l~~~~i~~~~~~l~~ag~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~--------~~~~~~~~~l~~l  315 (461)
T 3i3k_A          244 DGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLP--------PLTYDQLKDLNLL  315 (461)
T ss_dssp             TSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTCC--------CCCHHHHHTCHHH
T ss_pred             cCCCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCCCC--------CCCHHHHhcChHH
Confidence            66679999999999999999999999999999999999999999999999999976531        2588999999999


Q ss_pred             HHHHHHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCccc
Q 012536          320 HAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFA  399 (461)
Q Consensus       320 ~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~  399 (461)
                      +|||+|++|++|+++...|.+.+|+++ +||.||||+.|.++.+++||||++| +||++|+||||+++... ......++
T Consensus       316 ~a~i~E~lRl~p~~~~~~r~~~~d~~~-~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~Rfl~~~~~-~~~~~~~~  392 (461)
T 3i3k_A          316 DRCIKETLRLRPPIMIMMRMARTPQTV-AGYTIPPGHQVCVSPTVNQRLKDSW-VERLDFNPDRYLQDNPA-SGEKFAYV  392 (461)
T ss_dssp             HHHHHHHHHHSCSCCCEEEEECSCEEE-TTEEECTTCEEEECHHHHTTCTTTC-TTTTCCCGGGGGSCCHH-HHSSSSSC
T ss_pred             HHHHHHHHhcCCCccccccccCCCccC-CCEEECCCCEEEEChHHhcCCcccC-CCcccCCCCCCCCCCCC-CCCCccee
Confidence            999999999999998888888888877 9999999999999999999999999 99999999999973221 12356799


Q ss_pred             ccCCCCCCCCChHHHHHHHHHHHHHhccceEEEeecCCCccceeeeEEEeeCCceeeE
Q 012536          400 AFQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETKEATYRTMFTLHVDKGLHLY  457 (461)
Q Consensus       400 ~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  457 (461)
                      |||+|+|.|+|++||.+|++++++.||++|||+++++..+.......+..|..++.++
T Consensus       393 ~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~  450 (461)
T 3i3k_A          393 PFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTTMIHTPENPVIRY  450 (461)
T ss_dssp             TTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCBCCSSSSCCBSSCEEEE
T ss_pred             CCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeEEeCCCCCCCcccceeecCCCCceEEe
Confidence            9999999999999999999999999999999999876422211234456677777665


No 22 
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=100.00  E-value=1.7e-68  Score=512.99  Aligned_cols=420  Identities=20%  Similarity=0.323  Sum_probs=302.8

Q ss_pred             cccccchhhhhHHHHHHHHhcCc-EEEecCCCCeEEecChhhHHhhhhcCcccc-CCChhhHHHhHhhcc-CceeeeCCh
Q 012536            2 LNLLIHFSRLFDYQTSLAKKYRT-FRLLQPSCSEIFTTDPVNIEHILKTNFSNY-GKGDYNWNLMRDLFG-DGIFAVDGD   78 (461)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~yg~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f-~~~~~~~~~~~~~~g-~~l~~~~~~   78 (461)
                      ++++...++++.++.++++ ||+ |++.+++.++++|+||+++++|+.++  .| .+.+.+ ..+....| .++++.+++
T Consensus        35 G~~~~~~~~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~-~~~~~~~g~~~l~~~dg~  110 (467)
T 3dbg_A           35 GHGWRLARDPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNP--DYHIAGPLW-ESLEGLLGKEGVATANGP  110 (467)
T ss_dssp             HHHHHHHHCHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCT--TC--------------------------
T ss_pred             cchHHhccCHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCc--CcccccchH-HHHHHhcCCCCcccCCcH
Confidence            3455566789999999998 975 77778999999999999999999986  56 444333 34455567 788999999


Q ss_pred             hHHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHHHHHHhHhhhhhccCCCCCCCCCCCcc
Q 012536           79 KWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFG  158 (461)
Q Consensus        79 ~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~  158 (461)
                      .|+++|++++++|++++++.+.+ .+++.++.+++.+.    .++++|+...+..+++++++.++||.+++..     ..
T Consensus       111 ~h~~~R~~l~~~fs~~~l~~~~~-~i~~~~~~l~~~l~----~~~~~d~~~~~~~~~~~vi~~~~~g~~~~~~-----~~  180 (467)
T 3dbg_A          111 LHRRQRRTIQPAFRLDAIPAYGP-IMEEEAHALTERWQ----PGKTVDATSESFRVAVRVAARCLLRGQYMDE-----RA  180 (467)
T ss_dssp             -----CGGGHHHHSTTTSTTTHH-HHHHHHHHHHHHSC----TTSCEEHHHHHHHHHHHHHHHHHSCSSCCHH-----HH
T ss_pred             HHHHHHHHhhhhhCHHHHHHHHH-HHHHHHHHHHHHhc----cCCcCcHHHHHHHHHHHHHHHHHhCCcccch-----hH
Confidence            99999999999999999999886 67788888888763    3568999999999999999999999887531     11


Q ss_pred             chHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccC
Q 012536          159 NQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESE  238 (461)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~  238 (461)
                      ..+...+.............++ .+..+++.+..+...++...+.+++.+.++++++...      ...|+++.|+.+.+
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~------~~~dll~~ll~~~~  253 (467)
T 3dbg_A          181 ERLCVALATVFRGMYRRMVVPL-GPLYRLPLPANRRFNDALADLHLLVDEIIAERRASGQ------KPDDLLTALLEAKD  253 (467)
T ss_dssp             HHHHHHHHHHHHC-------------------------CCHHHHHHHHHHHHHHHTTCCS------SCCSHHHHHTTC--
T ss_pred             HHHHHHHHHHHHHHHHHhccch-hhhhhCCChHhHHHHHHHHHHHHHHHHHHHHHHhcCC------CchHHHHHHHhhcc
Confidence            3333333333222211111121 1222333344455667777888888888888766421      44699999998876


Q ss_pred             CCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcChH
Q 012536          239 KDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHY  318 (461)
Q Consensus       239 ~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~  318 (461)
                      +++..++++++.+++..+++||+|||+.+++|++++|++||++|++||+|++.+++..          .++.+++.+|||
T Consensus       254 ~~~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~----------~~~~~~l~~l~y  323 (467)
T 3dbg_A          254 DNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGGR----------PVAFEDVRKLRH  323 (467)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTS----------CCCHHHHTTCHH
T ss_pred             CCCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC----------CCCHHHHhhCHH
Confidence            5555799999999999999999999999999999999999999999999999998753          258999999999


Q ss_pred             HHHHHHHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCcc
Q 012536          319 LHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKF  398 (461)
Q Consensus       319 l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~  398 (461)
                      |+|||+|++|++|+++...|++.+|.++ +||.||||+.|.++.+++||||++| +||++|+|+||+++.. .......+
T Consensus       324 l~a~i~E~lRl~p~~~~~~R~~~~d~~l-~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeRfl~~~~-~~~~~~~~  400 (467)
T 3dbg_A          324 TGNVIVEAMRLRPAVWVLTRRAVAESEL-GGYRIPAGADIIYSPYAIQRDPKSY-DDNLEFDPDRWLPERA-ANVPKYAM  400 (467)
T ss_dssp             HHHHHHHHHHHSCSCCCEEEECSSCEEE-TTEEECTTCEEEECHHHHHTCTTTC-TTTTCCCGGGGSHHHH-TTSCTTSC
T ss_pred             HHHHHHHHhhcCCCccccceeeCCCccC-CCEEECCCCEEEEChHHhcCCchhc-CCccccCCccCCCCcc-ccCCCccc
Confidence            9999999999999999888888888777 9999999999999999999999999 9999999999996221 12245679


Q ss_pred             cccCCCCCCCCChHHHHHHHHHHHHHhccceEEEeecCCCccceeeeEEEeeCCceeeE
Q 012536          399 AAFQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETKEATYRTMFTLHVDKGLHLY  457 (461)
Q Consensus       399 ~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  457 (461)
                      +|||+|+|.|+|++||++|++++++.|+++|+|++.++. +.....+.++.|+ ++.++
T Consensus       401 ~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~~~p~-~l~~~  457 (467)
T 3dbg_A          401 KPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGS-NDAVRVGITLRPH-DLLVR  457 (467)
T ss_dssp             CSSCSSSSSCTTHHHHHHHHHHHHHHHHHHEEEEECTTC-EEEEEESSSEEEE-ECEEE
T ss_pred             cCCCCCCCCCccHHHHHHHHHHHHHHHHHhceeEeCCCC-CCccceeeEecCC-CCccc
Confidence            999999999999999999999999999999999998754 4444445556565 45443


No 23 
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=100.00  E-value=1.6e-63  Score=482.33  Aligned_cols=437  Identities=16%  Similarity=0.216  Sum_probs=310.0

Q ss_pred             cccccchhhhhHHHHHHHHhcCc-EEEecCCCCeEEecChhhHHhhhhcCccccCCChhhHHHhHhhccCcee-eeCChh
Q 012536            2 LNLLIHFSRLFDYQTSLAKKYRT-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWNLMRDLFGDGIF-AVDGDK   79 (461)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~yg~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~g~~l~-~~~~~~   79 (461)
                      ++++...++++.++.+++++||+ |.+++++.++|+|+||++++++++++. .+...+.....+...+|.+++ ..+++.
T Consensus        26 G~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~g~~  104 (491)
T 3dax_A           26 GCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGK-YFDWKKFHFATSAKAFGHRSIDPMDGNT  104 (491)
T ss_dssp             TTTGGGTCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCT-TEESSHHHHHHHHHHHTCCCCCGGGTSB
T ss_pred             hhHHHHhhCHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCc-cCChHHHHHHHHHHHcCCCcccccchhH
Confidence            34454556889999999999985 888999999999999999999998763 244444444445455677766 678899


Q ss_pred             HHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHh---cccCCceeHHHhHHHHHHhHhhhhhccCCCCCCCCCCC
Q 012536           80 WRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVA---AAAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDD  156 (461)
Q Consensus        80 ~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~---~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~  156 (461)
                      |+++|+.+.+.|+.+.+..+.+.+. +.+..+++.....   ......+++..++..+++++++.++||.+....+    
T Consensus       105 w~~~r~~~~~~f~~~~l~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~fG~~~~~~~----  179 (491)
T 3dax_A          105 TENINDTFIKTLQGHALNSLTESMM-ENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEAGYLTIFGRDLTRRD----  179 (491)
T ss_dssp             CCCHHHHHHHHHSHHHHHHHHHHHH-HHHHHHHC----------CCEEEEHHHHHHHHHHHHHHHHHHCBCSTTGG----
T ss_pred             HHHHHHHHHHhcCcccHHHHHHHHH-HHHHHHHHhhccCCcCCCCceeccHHHHHHHHHHHHhHHHHcCccccccc----
Confidence            9999999999999999988875443 3344433322211   1223468999999999999999999998765321    


Q ss_pred             ccchHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhc
Q 012536          157 FGNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLE  236 (461)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~  236 (461)
                         ...+.+........ .+...++.+...++....+...+..+.+.+.+.   +++.+..      ....|+++.++..
T Consensus       180 ---~~~~~~~~~~~~~~-~~~~~~p~l~~~lp~~~~~~~~~~~~~~~~~~~---~~~~~~~------~~~~d~l~~ll~~  246 (491)
T 3dax_A          180 ---TQKAHILNNLDNFK-QFDKVFPALVAGLPIHMFRTAHNAREKLAESLR---HENLQKR------ESISELISLRMFL  246 (491)
T ss_dssp             ---GHHHHHHHHHHHHH-HHHHHHHHHHTTCCGGGSHHHHHHHHHHHHHTS---HHHHTTC------BSCCHHHHHHHHH
T ss_pred             ---chhhhhhHHHHHHH-HHHHHhHHHHHhCCHhhhhHHHHHHHHHHHHHH---HHHhhcc------cchhHHHHHHHHH
Confidence               11111111111110 111112223333443333444444444333322   2222211      1346888888765


Q ss_pred             cCCCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcc-hhhhhcccHHHhhc
Q 012536          237 SEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCA-DEFAKLVTEAALEK  315 (461)
Q Consensus       237 ~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~-~~~~~~~~~~~l~~  315 (461)
                      .++. +.++++++.++++.+++||++||+.+++|++++|++||++|+||++||+++++..+.+.. +.....++.+++.+
T Consensus       247 ~~~~-~~~~~~~i~~~~~~~~~ag~~tta~tl~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~~~~~~~~~~~~~~l~~  325 (491)
T 3dax_A          247 NDTL-STFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELND  325 (491)
T ss_dssp             HHHH-BCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHTTTCCCCSSSCCCCCCHHHHHC
T ss_pred             HHhc-CCChHHHHHHHHHHHHHHhccchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhhccccccccCCCccccCHHHHhc
Confidence            4322 247899999999999999999999999999999999999999999999999985432100 00001258999999


Q ss_pred             ChHHHHHHHHhhcCCCCCCCCCcccccccccc---CCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCC-ccC
Q 012536          316 MHYLHAALSETLRLYPAVPVDGKNAAEDDILP---DGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNG-VFR  391 (461)
Q Consensus       316 lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~---~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~-~~~  391 (461)
                      ||||+|||+|+||++|+ +.+.|.+.+|+++.   +||.|||||.|.++.+++||||++| +||++|+||||++++ ...
T Consensus       326 lpyl~a~i~E~lRl~p~-~~~~R~~~~d~~l~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~PeRfl~~~~~~~  403 (491)
T 3dax_A          326 LPVLDSIIKESLRLSSA-SLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIY-PDPLTFKYDRYLDENGKTK  403 (491)
T ss_dssp             CHHHHHHHHHHHHHHEE-ECEEEEESSSEEEEETTEEEEECTTCEEEECTHHHHTCTTTS-SSTTSCCTTTTBCTTSSBC
T ss_pred             CHHHHHHHHHHHhcCCC-ccceeEecCCeEeecCCCcEEeCCCCEEEechHhhcCCcccC-CCHHHcCCccccCCCcccc
Confidence            99999999999999975 67788888887763   6899999999999999999999999 999999999999622 110


Q ss_pred             -------CCCCCcccccCCCCCCCCChHHHHHHHHHHHHHhccceEEEeecCCC-cccee---ee-EEEeeCCceeeEEe
Q 012536          392 -------SESPYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETK-EATYR---TM-FTLHVDKGLHLYAY  459 (461)
Q Consensus       392 -------~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~---~~-~~~~~~~~~~~~~~  459 (461)
                             ...+..++|||+|+|+|+|++||++|+++++|.||++|||+++++.. .+...   .+ .+..|..+++++++
T Consensus       404 ~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~r  483 (491)
T 3dax_A          404 TTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAGLGILPPLNDIEFKYK  483 (491)
T ss_dssp             CCCEETTEECSCSCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEETTTTCCCCCBCGGGTBEEECCBSSCCEEEEE
T ss_pred             ccccccCcCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHeeEEEccCCCCCCCCCcccccccccCCCCCceEEEE
Confidence                   11356799999999999999999999999999999999999976532 22221   13 35577778888876


Q ss_pred             e
Q 012536          460 P  460 (461)
Q Consensus       460 ~  460 (461)
                      .
T Consensus       484 ~  484 (491)
T 3dax_A          484 F  484 (491)
T ss_dssp             E
T ss_pred             e
Confidence            4


No 24 
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=100.00  E-value=6.2e-64  Score=468.78  Aligned_cols=373  Identities=21%  Similarity=0.325  Sum_probs=294.8

Q ss_pred             cccchhhhhHHHHHHHHhcCc-EEEecCCCCeEEecChhhHHhhhhcCccccCCChhhHHHhHhhccCceeeeCChhHHH
Q 012536            4 LLIHFSRLFDYQTSLAKKYRT-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWNLMRDLFGDGIFAVDGDKWRH   82 (461)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~yg~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~g~~l~~~~~~~~~~   82 (461)
                      +....++++.++.+++++||+ |. .+++.++++|+||+++++++.++  .|++++..+..+..+.|.++++.+++.|++
T Consensus        13 l~~~~~~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~~~g~~l~~~~g~~h~~   89 (389)
T 1n97_A           13 LKDLQQDPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSRLTGRGLLTDWGESWKE   89 (389)
T ss_dssp             HHHHHHCHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHHHHCSSTTTCCHHHHHH
T ss_pred             HHHHhhChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHHHhCCccccCCcHHHHH
Confidence            333446889999999999985 66 78888999999999999999986  788876333344555678888899999999


Q ss_pred             HHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHHHHHHhHhhhhhccCCCCCCCCCCCccchHH
Q 012536           83 QRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQFT  162 (461)
Q Consensus        83 ~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~  162 (461)
                      +|++++++|++++++.+.+ .+++.++.+++.+.     ++++|+.+.+..+++|+++.++||.+++  +       ++.
T Consensus        90 ~R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~-----~~~~dl~~~~~~~~~~vi~~~~fG~~~~--~-------~~~  154 (389)
T 1n97_A           90 ARKALKDPFLPKNVRGYRE-AMEEEARAFFGEWR-----GEERDLDHEMLALSLRLLGRALFGKPLS--P-------SLA  154 (389)
T ss_dssp             HHHHHCGGGSHHHHHTTHH-HHHHHHHHHHHTCC-----SCCEEHHHHHHHHHHHHHHHHHHSSCCC--H-------HHH
T ss_pred             HHHHhCcccCHHHHHHHHH-HHHHHHHHHHHHcc-----CCcCcHHHHHHHHHHHHHHHHHcCCcch--H-------HHH
Confidence            9999999999999999986 67788888887664     4589999999999999999999998875  1       344


Q ss_pred             HHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccCCCCC
Q 012536          163 KAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEKDPE  242 (461)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~  242 (461)
                      +.+..............   + .+++....++..++...+.+++.+.++++                   |+       .
T Consensus       155 ~~~~~~~~~~~~~~~~~---~-~~~p~~~~~~~~~~~~~~~~~~~~~i~~r-------------------ll-------~  204 (389)
T 1n97_A          155 EHALKALDRIMAQTRSP---L-ALLDLAAEARFRKDRGALYREAEALIVHP-------------------PL-------S  204 (389)
T ss_dssp             HHHHHHHHHHHHHHHCG---G-GGGCHHHHHHHHHHHHHHHHHHGGGTTST-------------------TG-------G
T ss_pred             HHHHHHHHHHHHHHhhH---H-HhcCCchhHHHHHHHHHHHHHHHHHHHHH-------------------hc-------c
Confidence            44333332221111111   1 33333323333344444444333332211                   22       2


Q ss_pred             CCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcChHHHHH
Q 012536          243 SMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLHAA  322 (461)
Q Consensus       243 ~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~  322 (461)
                      .++++++.+++..+++||+|||+.+++|++++|++||++|+++++|++.+.                           ||
T Consensus       205 ~l~~~~l~~~~~~~~~aG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~~~---------------------------a~  257 (389)
T 1n97_A          205 HLPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL---------------------------AA  257 (389)
T ss_dssp             GSCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHH---------------------------HH
T ss_pred             cCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH---------------------------HH
Confidence            388999999999999999999999999999999999999999999988642                           89


Q ss_pred             HHHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCcccccC
Q 012536          323 LSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQ  402 (461)
Q Consensus       323 i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~~Fg  402 (461)
                      |+|++|++|+++...|.+.+|.++ +||.||||+.|.++.+++|||  +| +||++|+||||++++   ......++|||
T Consensus       258 i~E~lRl~p~~~~~~R~~~~d~~l-~g~~Ip~Gt~V~~~~~~~~rd--~~-~dp~~F~PeR~l~~~---~~~~~~~~~FG  330 (389)
T 1n97_A          258 FQEALRLYPPAWILTRRLERPLLL-GEDRLPPGTTLVLSPYVTQRL--HF-PDGEAFRPERFLEER---GTPSGRYFPFG  330 (389)
T ss_dssp             HHHHHHHSCSSCCEEEEESSCEEE-TTEEECTTCEEEECHHHHHHH--SS-TTTTSCCTTHHHHSC---CCCBTTBCTTC
T ss_pred             HHHHHhcCCCccccceeeCCCceE-CCEEeCCCCEEEECHHHHhhh--cC-CCccccCCccCCCCC---CCCCCCccCCC
Confidence            999999999999888888888777 999999999999999999999  99 999999999998631   22345799999


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHhccceEEEeecCCCccceeeeEEEeeCCceeeEEeeC
Q 012536          403 AGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETKEATYRTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       403 ~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  461 (461)
                      +|+|.|+|++||++|++++++.|+++|+++++++.. +  ..+.+..|.+++++++++|
T Consensus       331 ~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-~--~~~~~~~p~~~~~v~~~~~  386 (389)
T 1n97_A          331 LGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPR-V--LAQVTLRPEGGLPARPREE  386 (389)
T ss_dssp             CSTTCCTTHHHHHHHHHHHHHHHHTTCBCCCCCCCC-E--EESSSEEETTCCEECCBC-
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHhceEEeCCCCc-c--cceEEeeeCCCceEEEeec
Confidence            999999999999999999999999999999876543 2  4456778888999998875


No 25 
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=100.00  E-value=2.7e-63  Score=480.14  Aligned_cols=437  Identities=17%  Similarity=0.232  Sum_probs=332.2

Q ss_pred             CcccccchhhhhHHHHHHHHhcCc-EEEecCCCCeEEecChhhHHhhhhcCccccCCChhhHHHhHhhccCce-eeeCCh
Q 012536            1 MLNLLIHFSRLFDYQTSLAKKYRT-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWNLMRDLFGDGI-FAVDGD   78 (461)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~yg~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~g~~l-~~~~~~   78 (461)
                      +++++...++++.++.+++++||+ |.+.+++.++++|+||++++++++++ +.+.........+..++|.+. ...+|+
T Consensus        25 iG~~~~~~~~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~g~  103 (491)
T 3v8d_A           25 LGCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHG-KYFDWKKFHFALSAKAFGHRSIDPMDGN  103 (491)
T ss_dssp             TTTTGGGTCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCC-TTEESSHHHHHHHHHHHTCCCCCGGGSS
T ss_pred             eccHHHHhcCHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcC-CccchHHHHHHHHHHhcCCcccccccch
Confidence            356677788999999999999984 88889999999999999999999876 445555555555666777654 445899


Q ss_pred             hHHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcc---cCCceeHHHhHHHHHHhHhhhhhccCCCCCCCCCC
Q 012536           79 KWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAA---AKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSD  155 (461)
Q Consensus        79 ~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~---~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~  155 (461)
                      .|+++|+.+.++|++++++.+.+ .+.+.+..+++.+.....   ....+++.+++..+++++++..+||.+....+.  
T Consensus       104 ~~~~~Rr~~~~~f~~~~l~~~~~-~i~~~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~fG~~~~~~~~--  180 (491)
T 3v8d_A          104 TTENINDTFIKTLQGHALNSLTE-SMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEAGYLTIFGRDLTRRDT--  180 (491)
T ss_dssp             BCCCHHHHHHHHHSHHHHHHHHH-HHHHHHHHHHSCCSSCGGGGCSCEEEEHHHHHHHHHHHHHHHHHHCBCCSCGGG--
T ss_pred             hHHHHHHHHHHHcCccchHHHHH-HHHHHHHHHHHhhhhcccCCCCCcccCHHHHHHHHHHHHHHHHHcCccccccch--
Confidence            99999999999999999999986 556667776653322111   345789999999999999999999988753211  


Q ss_pred             CccchHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhh
Q 012536          156 DFGNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLL  235 (461)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~  235 (461)
                       ....+.+.+..+.     .+...++.+...++....++..++.+.+.+++.+.++++++         ...|+++.++.
T Consensus       181 -~~~~~~~~~~~~~-----~~~~~~~~l~~~~p~~~~~~~~~a~~~l~~~~~~~~~~~~~---------~~~d~l~~l~~  245 (491)
T 3v8d_A          181 -QKAHILNNLDNFK-----QFDKVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQKRE---------SISELISLRMF  245 (491)
T ss_dssp             -HHHHHHHHHHHHH-----HHHHHHHHHHTTCCGGGCHHHHHHHHHHHHHTSHHHHTTCB---------SCCHHHHHHHH
T ss_pred             -hhhhhHHHHHHHH-----HHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhccc---------cccHHHHHHHH
Confidence             1122233222221     12222333434455556677777777777776665543321         34688888887


Q ss_pred             ccCCCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcc-hhhhhcccHHHhh
Q 012536          236 ESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCA-DEFAKLVTEAALE  314 (461)
Q Consensus       236 ~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~-~~~~~~~~~~~l~  314 (461)
                      ..++. +.+++++++.+++.+++||++||+.+++|++++|++||++|++|++||+.+++..+.... +.....++.+++.
T Consensus       246 ~~~~~-~~~~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~  324 (491)
T 3v8d_A          246 LNDTL-STFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELN  324 (491)
T ss_dssp             HHHHH-BCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTTCCCCSSSSCCCCCHHHHH
T ss_pred             Hhhcc-CCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHhhccccccccccccccCCHHHHh
Confidence            65332 358999999999999999999999999999999999999999999999999986532100 0001236899999


Q ss_pred             cChHHHHHHHHhhcCCCCCCCCCcccccccccc---CCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccC
Q 012536          315 KMHYLHAALSETLRLYPAVPVDGKNAAEDDILP---DGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFR  391 (461)
Q Consensus       315 ~lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~---~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~  391 (461)
                      ++|||+|||+|++|++| .+...|.+.+|.++.   +||.||+|+.|.++.+++||||++| +||++|+|+||++++...
T Consensus       325 ~~~~l~a~i~E~lRl~p-~~~~~R~~~~d~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~p~R~~~~~~~~  402 (491)
T 3v8d_A          325 DLPVLDSIIKESLRLSS-ASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIY-PDPLTFKYDRYLDENGKT  402 (491)
T ss_dssp             CCHHHHHHHHHHHHHHE-EECEEEEESSSEEEECSSCEEEECTTCEEEECTHHHHTCTTTS-SSTTSCCTTTTBCTTSSB
T ss_pred             cChHHHHHHHHHhhcCC-CCccceeccCCeeEeecCCcEEeCCCCEEEecchhhcCCcccC-CCccccCcccccCCCCCc
Confidence            99999999999999997 456778888887664   8999999999999999999999999 999999999999632111


Q ss_pred             --------CCCCCcccccCCCCCCCCChHHHHHHHHHHHHHhccceEEEeecCCC---cccee--eeEEEeeCCceeeEE
Q 012536          392 --------SESPYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETK---EATYR--TMFTLHVDKGLHLYA  458 (461)
Q Consensus       392 --------~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~  458 (461)
                              ......++|||+|+|.|+|++||.+|++++++.|+++|||+++++..   +.+..  ...++.|..++.|++
T Consensus       403 ~~~~~~~~~~~~~~~~~FG~G~~~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~v~~  482 (491)
T 3v8d_A          403 KTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAGLGILPPLNDIEFKY  482 (491)
T ss_dssp             CCCCEETTEECSCCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEEC---CCCCCBCGGGTBEEECCBSSCCEEEE
T ss_pred             ccccccccccCCCcccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceEEeCCCCCCCCCCCcccCcCcccCCCCCeEEEE
Confidence                    11356789999999999999999999999999999999999987632   22232  245677788888887


Q ss_pred             e
Q 012536          459 Y  459 (461)
Q Consensus       459 ~  459 (461)
                      +
T Consensus       483 ~  483 (491)
T 3v8d_A          483 K  483 (491)
T ss_dssp             E
T ss_pred             E
Confidence            5


No 26 
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=100.00  E-value=3.9e-61  Score=454.63  Aligned_cols=396  Identities=15%  Similarity=0.189  Sum_probs=311.8

Q ss_pred             cccccchhhhhHHHHHHHHhcC-c-EEEecCCCCeEEecChhhHHhhhhcCccccCCChhh-HHHhHhhcc-CceeeeCC
Q 012536            2 LNLLIHFSRLFDYQTSLAKKYR-T-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYN-WNLMRDLFG-DGIFAVDG   77 (461)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~yg-~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~-~~~~~~~~g-~~l~~~~~   77 (461)
                      +++....++++.++.+++++|| + |++.++|.+++++++|++++.++. + ..|++.... ......++| .++++.++
T Consensus        12 G~~~~~~~~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~~-~-~~~~~~~~~~~~~~~~~~g~~~l~~~dg   89 (417)
T 1izo_A           12 DNSLTLLKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYD-T-DRFQRQNALPKRVQKSLFGVNAIQGMDG   89 (417)
T ss_dssp             THHHHHHHHGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHTC-T-TTEECTTCSCHHHHTTTTCTTCGGGCCH
T ss_pred             chHHHHhhCcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHhc-c-cccccccccccchhhhhccccceeecCC
Confidence            3455556789999999999996 4 777778889999999999986554 3 456654322 223444566 46888999


Q ss_pred             hhHHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHHHHHHhHhhhhhccCCCCCCCCCCCc
Q 012536           78 DKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDF  157 (461)
Q Consensus        78 ~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~  157 (461)
                      +.|+++|++++++|++++++.+.+ .+++.++.+++.|..    ++++|+.+.+..+++++++.+ ||.+++..     .
T Consensus        90 ~~h~~~R~~~~~~f~~~~l~~~~~-~i~~~~~~l~~~l~~----~~~~dl~~~~~~~~~~vi~~~-~G~~~~~~-----~  158 (417)
T 1izo_A           90 SAHIHRKMLFLSLMTPPHQKRLAE-LMTEEWKAAVTRWEK----ADEVVLFEEAKEILCRVACYW-AGVPLKET-----E  158 (417)
T ss_dssp             HHHHHHHHHHHHTSSHHHHHHHHH-HHHHHHHHHHHHHTT----SSEEEHHHHHHHHHHHHHHHH-HTCCCCTT-----T
T ss_pred             hHHHHHHHHhhhhcCHHHHHHHHH-HHHHHHHHHHHHHhc----CCCeeHHHHHHHHHHHHHHHH-cCCCCCch-----H
Confidence            999999999999999999999986 678888888887743    458999999999999999998 69876531     1


Q ss_pred             cchHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhcc
Q 012536          158 GNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES  237 (461)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~  237 (461)
                      ..++.+.+.......    . .        ..+......++.+.+.+++.+.|+++++....    ....|+++.|+.+.
T Consensus       159 ~~~~~~~~~~~~~~~----~-~--------~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~----~~~~d~l~~ll~~~  221 (417)
T 1izo_A          159 VKERADDFIDMVDAF----G-A--------VGPRHWKGRRARPRAEEWIEVMIEDARAGLLK----TTSGTALHEMAFHT  221 (417)
T ss_dssp             HHHHHHHHHHHHHHT----T-C--------CSHHHHHHHHHHHHHHHHHHHHHHHHHTTSSC----CCTTSHHHHHHHCB
T ss_pred             HHHHHHHHHHHHhhc----c-c--------CCccchhHHHHHHHHHHHHHHHHHHHHhhccC----CCcCCHHHHHHHhc
Confidence            123333222221110    0 0        01122345567788899999999998775321    13468999999876


Q ss_pred             CCCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcCh
Q 012536          238 EKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMH  317 (461)
Q Consensus       238 ~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp  317 (461)
                      +.++..++++++..++..++ ||++||+.+++|++++|++||++|++|++|                          ++|
T Consensus       222 ~~~g~~l~~~~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~E--------------------------~~~  274 (417)
T 1izo_A          222 QEDGSQLDSRMAAIELINVL-RPIVAISYFLVFSALALHEHPKYKEWLRSG--------------------------NSR  274 (417)
T ss_dssp             CTTSCBCCHHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTHHHHHHHTC--------------------------CHH
T ss_pred             cccCCCCCHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHhhCHHHHHHHHhc--------------------------CCH
Confidence            55555688888877776654 999999999999999999999999999976                          368


Q ss_pred             HHHHHHHHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCc
Q 012536          318 YLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYK  397 (461)
Q Consensus       318 ~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~  397 (461)
                      ||+|||+|++|++|+++...|.+.+|.++ +|+.||||+.|.++.+++||||++| +||++|+|+||++++    .....
T Consensus       275 ~l~a~i~E~lRl~p~~~~~~R~~~~d~~l-~g~~ip~G~~v~~~~~~~~rdp~~~-~dp~~F~P~R~~~~~----~~~~~  348 (417)
T 1izo_A          275 EREMFVQEVRRYYPFGPFLGALVKKDFVW-NNCEFKKGTSVLLDLYGTNHDPRLW-DHPDEFRPERFAERE----ENLFD  348 (417)
T ss_dssp             HHHHHHHHHHHHSCCCCEEEEEECSCEEE-TTEEECTTCEEEEEHHHHHTCTTTS-SSTTSCCGGGGTTCC----CCSSS
T ss_pred             HHHHHHHHHhhcCCcccccceeecCCeeE-CCEEECCCCEEEecHHHhhcCcccc-CCccccChhhcCCCC----CCCcc
Confidence            99999999999999999988988888877 9999999999999999999999999 999999999998632    23567


Q ss_pred             ccccCCC----CCCCCChHHHHHHHHHHHHHhccceEEEeecCCCccceeeeEEEeeCCceeeEEeeC
Q 012536          398 FAAFQAG----PRICPGKEFAYRQMKILAAVLLQFFRFKLVDETKEATYRTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       398 ~~~Fg~G----~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  461 (461)
                      ++|||+|    +|.|+|++||++|++++++.|+++|+|++++++..... ...++.|.+++++++++|
T Consensus       349 ~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~r  415 (417)
T 1izo_A          349 MIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQSLHYSL-ARMPSLPESGFVMSGIRR  415 (417)
T ss_dssp             CCTTCSSCTTSSSCCTTHHHHHHHHHHHHHHHHHTEEEECCSCCCCCCS-SSSSCCCTTCCEEEEEEE
T ss_pred             eeCCCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHhCeEEeCCCCcCccc-ccCCCCCCCCceEeeeeC
Confidence            9999999    59999999999999999999999999998764322222 235567888999999887


No 27 
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=100.00  E-value=2.3e-61  Score=467.65  Aligned_cols=438  Identities=15%  Similarity=0.171  Sum_probs=301.5

Q ss_pred             ccccchhhhhHHHHHHHHhcCc-EEEecCCCCeEEecChhhHHhhhhcCccccCCChhhHHHhHhhccCceeeeCChhHH
Q 012536            3 NLLIHFSRLFDYQTSLAKKYRT-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWNLMRDLFGDGIFAVDGDKWR   81 (461)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~yg~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~g~~l~~~~~~~~~   81 (461)
                      +++...++++.++.+++++||+ |.+.+++.++|+|+||+++++++..+...++..+.....+...+|.+++..+++.|+
T Consensus        32 ~~~~~~~~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~r  111 (498)
T 3b6h_A           32 YALDFGKDAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAIFLMERIFDVQLPHYSPSDEK  111 (498)
T ss_dssp             THHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCHHHHHHHHHTSCCCCTTCCHHHHH
T ss_pred             hHHHhccCHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchhhHHHHHHHHcCCCccccCHHHHH
Confidence            4444456789999999999985 889999999999999999999998874325554444445555677777667777774


Q ss_pred             HHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHHHHHHhHhhhhhccCCCCCCCCCCCccchH
Q 012536           82 HQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQF  161 (461)
Q Consensus        82 ~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~  161 (461)
                         +++.+.|+.+.+..+.+.+.+.....+.+...........+++..++..+++++++.++||.+++... .. ...+.
T Consensus       112 ---r~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~vi~~~~~~~~fG~~~~~~~-~~-~~~~~  186 (498)
T 3b6h_A          112 ---ARMKLTLLHRELQALTEAMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSFLLRAGYLTLYGIEALPRT-HE-SQAQD  186 (498)
T ss_dssp             ---HHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEHHHHHHHHHHHHHHHHHHCBSCSSCC-HH-HHHHH
T ss_pred             ---HHHHHhhchHhHHHHHHHHHHHHHHHHhhcccccCCCcceecHHHHHHHHHHHHHHHhhcCccccccc-cc-chhhH
Confidence               45556899988888775444433333333222111233468999999999999999999998874311 00 00012


Q ss_pred             HHHhhhhhhHHHhhhhhHHHHHHH-hhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccCCC
Q 012536          162 TKAFDDSNFIVYCRYVDVFWELKR-YLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEKD  240 (461)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~  240 (461)
                      .+.+........ .+...++.+.. +++....+...++.+.+.+.+   ++++.+..      ....|+++.++...+++
T Consensus       187 ~~~~~~~~~~~~-~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~------~~~~d~l~~ll~~~~~~  256 (498)
T 3b6h_A          187 RVHSADVFHTFR-QLDRLLPKLARGSLSVGDKDHMCSVKSRLWKLL---SPARLARR------AHRSKWLESYLLHLEEM  256 (498)
T ss_dssp             HHHHHHHHHHHH-HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHT---CHHHHTTC------BSCCHHHHHHHHHHHHT
T ss_pred             HHhhHHHHHHHH-HHHhhHHHHHHHhcCchhhHHHHHHHHHHHHHH---HHHHHhcc------ccHHHHHHHHHHHHHhC
Confidence            222222222111 11111111221 122111223333333333222   22222211      13468999888765332


Q ss_pred             CCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcChHHH
Q 012536          241 PESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLH  320 (461)
Q Consensus       241 ~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~  320 (461)
                       +.++++++. .++.+++||++||+.+++|++++|++||++|+||++|++++++..+.+..  ....++.+++.+||||+
T Consensus       257 -~~~~~~~~~-~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~~--~~~~~~~~~l~~lpyl~  332 (498)
T 3b6h_A          257 -GVSEEMQAR-ALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPVS--QTTTLPQKVLDSTPVLD  332 (498)
T ss_dssp             -TCCHHHHHH-HHHHHHHHHHTTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHC------------CCTHHHHSCHHHH
T ss_pred             -CCCHHHHHH-HHHHHHHHhhhchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhcccCCCCC--cccccCHHHHhcCHHHH
Confidence             246777777 88889999999999999999999999999999999999999986532100  00125889999999999


Q ss_pred             HHHHHhhcCCCCCCCCCcccccccccc----CCeeecCCCEEEEehhh-hccCccCccCCCCCcccCCcCCCC-ccC---
Q 012536          321 AALSETLRLYPAVPVDGKNAAEDDILP----DGFKVKKGDGVNYMTYA-MGRMTYIWGEDAEEFRPERWLVNG-VFR---  391 (461)
Q Consensus       321 a~i~E~lRl~~~~~~~~r~~~~~~~~~----~g~~ip~g~~v~~~~~~-~~~d~~~~g~~p~~F~P~R~~~~~-~~~---  391 (461)
                      |||+|++|++|+ +...|.+.+|+++.    +||.|||||.|.++.++ +||||++| +||++|+||||++++ ...   
T Consensus       333 a~i~E~lRl~p~-~~~~R~~~~d~~~~~~~g~g~~ip~Gt~v~~~~~~~~~~d~~~~-~~p~~F~PeRfl~~~~~~~~~~  410 (498)
T 3b6h_A          333 SVLSESLRLTAA-PFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIY-TDPEVFKYNRFLNPDGSEKKDF  410 (498)
T ss_dssp             HHHHHHHHHHBC-BCEEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTS-SSTTSCCTTTTBCTTSSBCCCC
T ss_pred             HHHHHHHhccCC-CcceeeecCCeeeecCCCCeEEeCCCCEEEeCchHhhcCCcccc-CChhhcCcccccCCCccccccc
Confidence            999999999985 67788888887762    68999999999999999 99999999 999999999999622 110   


Q ss_pred             ----CCCCCcccccCCCCCCCCChHHHHHHHHHHHHHhccceEEEeecCCC-cc--ce--eeeEEEeeCCceeeEEeeC
Q 012536          392 ----SESPYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETK-EA--TY--RTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       392 ----~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~-~~--~~--~~~~~~~~~~~~~~~~~~r  461 (461)
                          ...+..++|||+|+|.|+|++||.+|++++++.||++|||+++++.. .+  +.  ....+..|..++++++++|
T Consensus       411 ~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  489 (498)
T 3b6h_A          411 YKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADVEIPEFDLSRYGFGLMQPEHDVPVRYRIR  489 (498)
T ss_dssp             EETTEECSCSCCTTEETTEECSSHHHHHHHHHHHHHHHHHTEEEEESSTTCCCCCBCGGGTBSSBCCBSSCCEEEEEEC
T ss_pred             ccccccCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHceeEeCCCCCCCCCCCccccccccCCCCCCccEEEEec
Confidence                01246799999999999999999999999999999999999976531 22  21  1233456777889888876


No 28 
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=100.00  E-value=3.5e-61  Score=452.31  Aligned_cols=374  Identities=17%  Similarity=0.181  Sum_probs=301.3

Q ss_pred             chhhhhHHHHHHHHhcCc-EEEecCCCCeEEecChhhHHhhhhcCccccCCChhhH-H-----HhHhhccCceeeeCChh
Q 012536            7 HFSRLFDYQTSLAKKYRT-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNW-N-----LMRDLFGDGIFAVDGDK   79 (461)
Q Consensus         7 ~~~~~~~~~~~~~~~yg~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~-~-----~~~~~~g~~l~~~~~~~   79 (461)
                      ...+++.++.++ ++||+ |++.+++.++++|+||+.+++++.++ + |++++... .     .+....+.++++.+++.
T Consensus        18 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~-f~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~   94 (411)
T 3a4g_A           18 FWQNPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDP-R-LSKDWRHTLPEDQRADMPATPTPMMILMDPPD   94 (411)
T ss_dssp             GTTCCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCT-T-EESCGGGGSCGGGCTTCCSCSSCCGGGCCTTH
T ss_pred             hhcCchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCC-C-cccccccccccccccccCcccccccccCCchH
Confidence            356899999999 88975 77778889999999999999999986 3 88765432 1     01122456788899999


Q ss_pred             HHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHH-hHHHHHHhHhhhhhccCCCCCCCCCCCcc
Q 012536           80 WRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQD-VLLKSSLDSIFKVGFGVELNSLSGSDDFG  158 (461)
Q Consensus        80 ~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~-~~~~~~~~~i~~~~fG~~~~~~~~~~~~~  158 (461)
                      |+++|++++++|++++++.+.+ .+++.++.+++.+..    ++++|+.. +...+++++++.+ ||.+.+.    .   
T Consensus        95 h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~----~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~----~---  161 (411)
T 3a4g_A           95 HTRLRKLVGRSFTVRRMNELEP-RITEIADGLLAGLPT----DGPVDLMREYAFQIPVQVICEL-LGVPAED----R---  161 (411)
T ss_dssp             HHHHHHHHHTTCCHHHHHHHHH-HHHHHHHHHHHHSCS----SSCEEHHHHTTTTHHHHHHHHH-HTCCGGG----H---
T ss_pred             HHHHHHHhhhhhCHHHHHHHHH-HHHHHHHHHHHHHHh----cCCccHHHHHHHHhHHHHHHHH-hCCCHHH----H---
Confidence            9999999999999999999986 778888888887743    35799974 5578999999975 8977531    0   


Q ss_pred             chHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccC
Q 012536          159 NQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESE  238 (461)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~  238 (461)
                      ..+.+.+......               .+   .+...++...+.+++.+.++++++.        ...|+++.|+.+.+
T Consensus       162 ~~~~~~~~~~~~~---------------~p---~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~ll~~~~  215 (411)
T 3a4g_A          162 DDFSAWSSVLVDD---------------SP---ADDKNAAMGKLHGYLSDLLERKRTE--------PDDALLSSLLAVSD  215 (411)
T ss_dssp             HHHHHHHHHHTTS---------------SC---TTTHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHCCC
T ss_pred             HHHHHHHHHHhcc---------------CC---HHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHHhhc
Confidence            2232222211110               00   0234567778888899998888763        33689999998754


Q ss_pred             CCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcChH
Q 012536          239 KDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHY  318 (461)
Q Consensus       239 ~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~  318 (461)
                      +++..++++++.+++..+++||+|||+.+++|++++|++||++|+|+++|+                           .|
T Consensus       216 ~~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~---------------------------~~  268 (411)
T 3a4g_A          216 EDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDP---------------------------SL  268 (411)
T ss_dssp             TTCCCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG---------------------------GG
T ss_pred             cCCCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHhCHHHHHHHhcCH---------------------------HH
Confidence            344569999999999999999999999999999999999999999999873                           27


Q ss_pred             HHHHHHHhhcCCCCCC-CCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCc
Q 012536          319 LHAALSETLRLYPAVP-VDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYK  397 (461)
Q Consensus       319 l~a~i~E~lRl~~~~~-~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~  397 (461)
                      |+|||+|++|++|+++ ..+|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+||||.          ..
T Consensus       269 l~a~i~E~lRl~p~~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~----------~~  336 (411)
T 3a4g_A          269 ISSAVEEFLRFDSPVSQAPIRFTAEDVTY-SGVTIPAGEMVMLGLAAANRDADWM-PEPDRLDITRDA----------SG  336 (411)
T ss_dssp             HHHHHHHHHHHTCSBCBCCCEEESSCEEE-TTEEECTTCEEEEBHHHHTTCTTTS-SSTTSCCTTSCC----------TT
T ss_pred             HHHHHHHHHHhcccccCCceeEeCCCEEE-CCEEECCCCEEEeChhhhCCChhhc-CCccccCCCCCC----------CC
Confidence            9999999999999999 678888888777 9999999999999999999999999 999999999983          25


Q ss_pred             ccccCCCCCCCCChHHHHHHHHHHHHHhccce-EEEeecCCCccceeeeEEEeeCCceeeEEeeC
Q 012536          398 FAAFQAGPRICPGKEFAYRQMKILAAVLLQFF-RFKLVDETKEATYRTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       398 ~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  461 (461)
                      ++|||+|+|.|+|++||++|++++++.|+++| +++++++..++.+.....+.+..+++|++++|
T Consensus       337 ~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~~r  401 (411)
T 3a4g_A          337 GVFFGHGIHFCLGAQLARLEGRVAIGRLFADRPELALAVGLDELVYRESTLVRGLSRMPVTMGPR  401 (411)
T ss_dssp             CCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCCTTBCCBSCCEEECCCC
T ss_pred             CCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCcEECCCccccccccCccccCcceeEEEecCc
Confidence            79999999999999999999999999999999 69997543344444444455677889988876


No 29 
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=100.00  E-value=8.6e-61  Score=453.02  Aligned_cols=387  Identities=17%  Similarity=0.147  Sum_probs=298.2

Q ss_pred             hhhhHHHHHHHHhcCcEEEec-CCCCeEEecChhhHHhhhhcCccccCCChh-hHH--HhH-h-h---cc------Ccee
Q 012536            9 SRLFDYQTSLAKKYRTFRLLQ-PSCSEIFTTDPVNIEHILKTNFSNYGKGDY-NWN--LMR-D-L---FG------DGIF   73 (461)
Q Consensus         9 ~~~~~~~~~~~~~yg~~~~~~-~~~~~v~v~dp~~~~~il~~~~~~f~~~~~-~~~--~~~-~-~---~g------~~l~   73 (461)
                      .+++.++.++++++++|.+.+ |+.++++|++|+.++++++++ +.|++++. ..-  ... . +   .|      .+++
T Consensus        25 ~~p~~~~~~l~~~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~-~~fs~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~  103 (428)
T 1cpt_A           25 EVIYPAFKWLRDEQPLAMAHIEGYDPMWIATKHADVMQIGKQP-GLFSNAEGSEILYDQNNEAFMRSISGGCPHVIDSLT  103 (428)
T ss_dssp             HHHHHHHHHHHHHCSEEEECCTTSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHTTTSSCSSCCGG
T ss_pred             CCccHHHHHHHHhCCeeeccccCCCCeEEEccHHHHHHHHcCc-hhccCccccccCCcccccchhccccccccccccccc
Confidence            579999999988545677776 678999999999999999875 56776543 110  001 1 2   32      4688


Q ss_pred             eeCChhHHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHH-hHHHHHHhHhhhhhccCCCCCCC
Q 012536           74 AVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQD-VLLKSSLDSIFKVGFGVELNSLS  152 (461)
Q Consensus        74 ~~~~~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~-~~~~~~~~~i~~~~fG~~~~~~~  152 (461)
                      +.+++.|+++|++++++|++++++.+.+ .+++.++.+++.+.+   .++.+|+.. +...+++++|+.+ ||.+.+.. 
T Consensus       104 ~~~g~~~~~~Rr~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~-  177 (428)
T 1cpt_A          104 SMDPPTHTAYRGLTLNWFQPASIRKLEE-NIRRIAQASVQRLLD---FDGECDFMTDCALYYPLHVVMTA-LGVPEDDE-  177 (428)
T ss_dssp             GCCTTHHHHHHHHHHTTSSHHHHGGGHH-HHHHHHHHHHHHHHT---SSSEEEHHHHTTTTHHHHHHHHH-HTCCGGGH-
T ss_pred             cCChHHHHHHHHHhhhhhCHHHHHHHHH-HHHHHHHHHHHHHHH---hCCCeehHHHHHhhhHHHHHHHH-cCCCHhHH-
Confidence            8899999999999999999999999986 778899999998864   225799985 5567999999999 99876421 


Q ss_pred             CCCCccchHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHH
Q 012536          153 GSDDFGNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSR  232 (461)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~  232 (461)
                            ..+.+............ ... +++..++.....++..++...+.+++.+.++++++.        ...|+++.
T Consensus       178 ------~~~~~~~~~~~~~~~~~-~~~-~P~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~~  241 (428)
T 1cpt_A          178 ------PLMLKLTQDFFGVHEPD-EQA-VAAPRQSADEAARRFHETIATFYDYFNGFTVDRRSC--------PKDDVMSL  241 (428)
T ss_dssp             ------HHHHHHHHTTTCC------------------CHHHHHHHHHHHHHHHHHHHHHHHTTS--------CCSSHHHH
T ss_pred             ------HHHHHHHHHHHhccccc-ccc-cccccccchhhHHHHHHHHHHHHHHHHHHHHHHHcC--------CCCcHHHH
Confidence                  23333333222111000 011 111111111223456677788888888888887652        34689999


Q ss_pred             HhhccCCCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHH
Q 012536          233 FLLESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAA  312 (461)
Q Consensus       233 ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~  312 (461)
                      |+.+.. ++..++++++.+++..+++||+|||+.+++|++++|++||++|+|+++|++                      
T Consensus       242 ll~~~~-~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~----------------------  298 (428)
T 1cpt_A          242 LANSKL-DGNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAKSDPA----------------------  298 (428)
T ss_dssp             HHHCBS-SSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG----------------------
T ss_pred             HHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHhHH----------------------
Confidence            998754 345699999999999999999999999999999999999999999998832                      


Q ss_pred             hhcChHHHHHHHHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCC
Q 012536          313 LEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRS  392 (461)
Q Consensus       313 l~~lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~  392 (461)
                           |++|||+|++|++|+++..+|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+||||..      
T Consensus       299 -----~l~a~i~E~lRl~p~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~~------  365 (428)
T 1cpt_A          299 -----LIPRLVDEAVRWTAPVKSFMRTALADTEV-RGQNIKRGDRIMLSYPSANRDEEVF-SNPDEFDITRFPN------  365 (428)
T ss_dssp             -----GHHHHHHHHHHHHCCBCCCEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTC-SSTTSCCTTCCSC------
T ss_pred             -----HHHHHHHHHHHhCCcccccceeeCCCeeE-CCEEECCCCEEEeCHHHhCCChhhC-CChhhcCCCCCCC------
Confidence                 79999999999999999888888888777 9999999999999999999999999 9999999999941      


Q ss_pred             CCCCcccccCCCCCCCCChHHHHHHHHHHHHHhccceE-EEeecCCCccceeeeEEEeeCCceeeEEeeC
Q 012536          393 ESPYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFFR-FKLVDETKEATYRTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       393 ~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  461 (461)
                          .++|||+|+|.|+|++||++|++++++.|+++|+ +++.+ +..+  ..........+++|+++||
T Consensus       366 ----~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~-~~~~--~~~~~~~~~~~lpv~~~p~  428 (428)
T 1cpt_A          366 ----RHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLKSVELSG-PPRL--VATNFVGGPKNVPIRFTKA  428 (428)
T ss_dssp             ----CCCTTCCSTTCCTTHHHHHHHHHHHHHHHGGGEEEEEESS-CCEE--CCCSSBCSEEECEEEEEEC
T ss_pred             ----CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCceeCC-Cccc--ccCccccCcceeeEEeeCC
Confidence                3799999999999999999999999999999998 88864 2222  2222233445788888886


No 30 
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=100.00  E-value=3.4e-61  Score=455.98  Aligned_cols=375  Identities=20%  Similarity=0.199  Sum_probs=298.7

Q ss_pred             hhhhhHHHHHHHHhcCc-EEEec-CCCCeEEecChhhHHhhhhcCccccCCChhh--HHHh--HhhccCceeeeCChhHH
Q 012536            8 FSRLFDYQTSLAKKYRT-FRLLQ-PSCSEIFTTDPVNIEHILKTNFSNYGKGDYN--WNLM--RDLFGDGIFAVDGDKWR   81 (461)
Q Consensus         8 ~~~~~~~~~~~~~~yg~-~~~~~-~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~--~~~~--~~~~g~~l~~~~~~~~~   81 (461)
                      .++++.++.++ ++||+ |.+.+ ++.++++|+||+++++||.++  .|++++..  ....  ....+.++++.+++.|+
T Consensus        45 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~  121 (436)
T 2cd8_A           45 AADPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDWRNSTTPLTEAEAALNHNMLESDPPRHT  121 (436)
T ss_dssp             HHCCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCGGGCSSCCCTTGGGTCCSGGGCCTTHHH
T ss_pred             ccChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCC--CCcccccccccccccccccccccccccCchHHH
Confidence            45789999999 89975 77777 678899999999999999986  57776531  1111  02345778889999999


Q ss_pred             HHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhH-HHHHHhHhhhhhccCCCCCCCCCCCccch
Q 012536           82 HQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVL-LKSSLDSIFKVGFGVELNSLSGSDDFGNQ  160 (461)
Q Consensus        82 ~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~  160 (461)
                      ++|++++++|++++++.+.+ .+++.++.+++.+.+  ..++++|+...+ ..+++++++. +||.+.+.       ...
T Consensus       122 ~~R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~~~vi~~-~~G~~~~~-------~~~  190 (436)
T 2cd8_A          122 RLRKLVAREFTMRRVELLRP-RVQEIVDGLVDAMLA--APDGRADLMESLAWPLPITVISE-LLGVPEPD-------RAA  190 (436)
T ss_dssp             HHHHHHGGGSSHHHHHTTHH-HHHHHHHHHHHHHHT--CTTSCEEHHHHTTTHHHHHHHHH-HHTCCGGG-------HHH
T ss_pred             HHHHHhHHhhCHHHHHHHHH-HHHHHHHHHHHHHHh--ccCCCcchHHHHHHHHHHHHHHH-HhCCCHHH-------HHH
Confidence            99999999999999999986 778899999998874  225689999976 5799999998 79976531       122


Q ss_pred             HHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccCCC
Q 012536          161 FTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEKD  240 (461)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~  240 (461)
                      +.+.+......               .   ..++..++...+.+++.+.++++++.        ...|+++.|+.+..++
T Consensus       191 ~~~~~~~~~~~---------------~---~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~ll~~~~~~  244 (436)
T 2cd8_A          191 FRVWTDAFVFP---------------D---DPAQAQTAMAEMSGYLSRLIDSKRGQ--------DGEDLLSALVRTSDED  244 (436)
T ss_dssp             HHHHHHHHHSC---------------S---STTHHHHHHHHHHHHHHHHHHHHTTS--------CCCSHHHHHHHHHHHC
T ss_pred             HHHHHHHHhcc---------------C---CHHHHHHHHHHHHHHHHHHHHHHhcC--------CCCCHHHHHHHhhhcc
Confidence            33222221110               0   01345567778888888888887653        3368999999875433


Q ss_pred             CCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcChHHH
Q 012536          241 PESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLH  320 (461)
Q Consensus       241 ~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~  320 (461)
                      +..++++++.+++..+++||+|||+.+++|++++|++||++|+||++|+                           .||+
T Consensus       245 ~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~e~---------------------------~~l~  297 (436)
T 2cd8_A          245 GSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADM---------------------------TLLD  297 (436)
T ss_dssp             TTTSCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCHHHHHHHHHCG---------------------------GGHH
T ss_pred             CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHhhCh---------------------------hhHH
Confidence            4569999999999999999999999999999999999999999999872                           2699


Q ss_pred             HHHHHhhcCCCCCC-CCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCccc
Q 012536          321 AALSETLRLYPAVP-VDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFA  399 (461)
Q Consensus       321 a~i~E~lRl~~~~~-~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~  399 (461)
                      |||+|++|++|+++ ..+|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+||||-          ..++
T Consensus       298 a~i~E~lRl~p~~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~----------~~~~  365 (436)
T 2cd8_A          298 GAVEEMLRYEGPVESATYRFPVEPVDL-DGTVIPAGDTVLVVLADAHRTPERF-PDPHRFDIRRDT----------AGHL  365 (436)
T ss_dssp             HHHHHHHHHHCSBSSCCCBEESSCEEE-TTEEECTTCCEEECHHHHTTCTTTS-SSTTSCCTTSCC----------TTCC
T ss_pred             HHHHHHHHhcCcccCceeEEeCCCeEE-CCEEECCCCEEEeChHHhCCCcccC-CCccccCCCCCC----------CCCC
Confidence            99999999999999 678888888777 9999999999999999999999999 999999999961          3589


Q ss_pred             ccCCCCCCCCChHHHHHHHHHHHHHhccce-EEEeecCCCccceeeeEEEeeCCceeeEEeeC
Q 012536          400 AFQAGPRICPGKEFAYRQMKILAAVLLQFF-RFKLVDETKEATYRTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       400 ~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  461 (461)
                      |||+|+|.|+|++||++|++++++.|+++| +++++.+..++.+.....+.+..+++|++++|
T Consensus       366 pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~r  428 (436)
T 2cd8_A          366 AFGHGIHFCIGAPLARLEARIAVRALLERCPDLALDVSPGELVWYPNPMIRGLKALPIRWRRG  428 (436)
T ss_dssp             TTCCSTTCCTTHHHHHHHHHHHHHHHHHSCTTCCBCSCGGGCCBCCCTTBCCBSCCEEC----
T ss_pred             CCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCceecCCCccceeccCcccCCcceeEEEEecC
Confidence            999999999999999999999999999999 69986433344444444455677899999886


No 31 
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=100.00  E-value=3.5e-60  Score=447.83  Aligned_cols=395  Identities=16%  Similarity=0.197  Sum_probs=311.6

Q ss_pred             cccccchhhhhHHHHHHHHhc-Cc-EEEecCCCCeEEecChhhHHhhhhcCccccCCChhhH-HHhHhhcc-CceeeeCC
Q 012536            2 LNLLIHFSRLFDYQTSLAKKY-RT-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNW-NLMRDLFG-DGIFAVDG   77 (461)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~y-g~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~-~~~~~~~g-~~l~~~~~   77 (461)
                      ++++....+|+.++.+++++| |+ |++..++.+++++++|+.++ ++.++ +.|++..... .....++| .+++..|+
T Consensus        11 G~~~~~~~~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~~-~~f~~~~~~~~~~~~~~~g~~~l~~~dg   88 (415)
T 3awm_A           11 DETLSLLADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYDT-TRFEREGAMPVAIQKTLLGQGGVQGLDG   88 (415)
T ss_dssp             CCHHHHHHSTTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTCT-TTEECTTCSCHHHHTTTSCSSSGGGCCH
T ss_pred             chHHHHHhChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhcc-cccccccccchhhhhhccCCcceeecCc
Confidence            455556678999999999999 64 77777788999999999987 66665 5677643322 23334556 57888999


Q ss_pred             hhHHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHHHHHHhHhhhhhccCCCCCCCCCCCc
Q 012536           78 DKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDF  157 (461)
Q Consensus        78 ~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~  157 (461)
                      +.|+++|++++++|+++.++.+.+ .+++.++.+++.|..    ++++|+.+.+..+++++++.+ ||.+++..     .
T Consensus        89 ~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~ll~~~~~----~~~vdl~~~~~~~~~~vi~~~-~G~~~~~~-----~  157 (415)
T 3awm_A           89 ETHRHRKQMFMGLMTPERVRALAQ-LFEAEWRRAVPGWTR----KGEIVFYDELHEPLTRAVCAW-AGVPLPDD-----E  157 (415)
T ss_dssp             HHHHHHHHHHHTTCCHHHHHHHHH-HHHHHHHHHHHHHHH----HSEEEHHHHHHHHHHHHHHHH-HTCCCCGG-----G
T ss_pred             HHHHHHHHHHHHhcCHHHHHHHHH-HHHHHHHHHHHhhcc----CCcEeHHHHHHHHHHHHHHHH-cCCCCCcc-----h
Confidence            999999999999999999999986 678889999988864    347999999999999999998 89876431     1


Q ss_pred             cchHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhcc
Q 012536          158 GNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES  237 (461)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~  237 (461)
                      ..++.+.+......    ..        . ..+......++...+.+++.+.++++++....    ...+|+++.|+.+.
T Consensus       158 ~~~~~~~~~~~~~~----~~--------~-~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~----~~~~d~l~~ll~~~  220 (415)
T 3awm_A          158 AGNRAGELRALFDA----AG--------S-ASPRHLWSRLARRRVDAWAKRIIEGIRAGSIG----SGSGTAAYAIAWHR  220 (415)
T ss_dssp             HHHHHHHHHHHHHS----TT--------C-SSHHHHHHHHHHHHHHHHHHHHHHHHHHTSSC----CCTTSHHHHHHHCB
T ss_pred             HHHHHHHHHHHHHH----hc--------c-cCchHHHHHHHHHHHHHHHHHHHHHHHHhhhc----CCCCCHHHHHHhhh
Confidence            12222222211110    00        0 01223345677788899999999988775321    13468999999876


Q ss_pred             CCCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcCh
Q 012536          238 EKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMH  317 (461)
Q Consensus       238 ~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp  317 (461)
                      +.++..++++++..++..++ ||++||+.+++|++++|++||++|++|++|                           +|
T Consensus       221 ~~~g~~~~~~~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~e---------------------------~~  272 (415)
T 3awm_A          221 DRHDDLLSPHVAAVELVNVL-RPTVAIAVYITFVAHALQTCSGIRAALVQQ---------------------------PD  272 (415)
T ss_dssp             CTTSCBCCHHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTTHHHHHHHC---------------------------TT
T ss_pred             hccCCCCCHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhChHHHHHHHHH---------------------------HH
Confidence            55555688888887776655 999999999999999999999999999865                           48


Q ss_pred             HHHHHHHHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCc
Q 012536          318 YLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYK  397 (461)
Q Consensus       318 ~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~  397 (461)
                      ||+|||+|+||++|+++...|.+.+|.++ +|+.||+|+.|.++.+++||||++| +||++|+|+||+++.    .+...
T Consensus       273 ~l~a~i~E~lRl~p~~~~~~R~~~~d~~l-~G~~ip~G~~V~~~~~~~~rdp~~~-~dp~~F~P~R~~~~~----~~~~~  346 (415)
T 3awm_A          273 YAELFVQEVRRFYPFFPAVVARASQDFEW-EGMAFPEGRQVVLDLYGSNHDAATW-ADPQEFRPERFRAWD----EDSFN  346 (415)
T ss_dssp             HHHHHHHHHHHHSCCSCEEEEEESSCEEE-TTEEECTTCEEEEEHHHHHTCHHHH-SSTTSCCGGGGGGCC----CCSSS
T ss_pred             HHHHHHHHHhhcCCCccccceeecCCeEE-CCEEECCCCEEEeCchhhcCCcccc-CCccccChhhcCCCC----CCCCC
Confidence            99999999999999999888888888777 9999999999999999999999999 999999999998632    23567


Q ss_pred             ccccCCC----CCCCCChHHHHHHHHHHHHHhccceEEEeecCCCccceeeeEEEeeCCceeeEEeeC
Q 012536          398 FAAFQAG----PRICPGKEFAYRQMKILAAVLLQFFRFKLVDETKEATYRTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       398 ~~~Fg~G----~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  461 (461)
                      ++|||+|    +|.|+|++||++|++++++.|+++|+|++++++..+. .....+.|+++++++++++
T Consensus       347 ~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~  413 (415)
T 3awm_A          347 FIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSID-FARLPALPKSGFVMRNVHI  413 (415)
T ss_dssp             CCTTCCSCTTTSCCCTTHHHHHHHHHHHHHHHHHTCEEECCSCCCCBC-TTSSSCCBTTCCEEEEEES
T ss_pred             ccCCCCCCCCCCCcCchHHHHHHHHHHHHHHHHHhcEEEeCCCCCCcC-cCCCccccCCCceEEEEeC
Confidence            9999999    5999999999999999999999999999876432222 1335567888999998763


No 32 
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=100.00  E-value=9.3e-61  Score=450.11  Aligned_cols=378  Identities=17%  Similarity=0.210  Sum_probs=297.9

Q ss_pred             chhhhhHHHHHHHHhcCc-EEEecCCCCeEEecChhhHHhhhhcCccccCCChhh-----HHHhHhhccCceeeeCChhH
Q 012536            7 HFSRLFDYQTSLAKKYRT-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYN-----WNLMRDLFGDGIFAVDGDKW   80 (461)
Q Consensus         7 ~~~~~~~~~~~~~~~yg~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~-----~~~~~~~~g~~l~~~~~~~~   80 (461)
                      ..++|+.++.+++ +||+ |++..++.++++|+||+.+++++.++ +.|++++..     ...+....+.++++.+++.|
T Consensus        11 ~~~~p~~~~~~~r-~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h   88 (404)
T 3ejb_B           11 FLKNPYSFYDTLR-AVHPIYKGSFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQNQMMLFQNQPDH   88 (404)
T ss_dssp             HHHCHHHHHHHHH-HHCSEEEEEETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHHHTSGGGCCTTHH
T ss_pred             cccCchHHHHHHH-hhCCEeeccCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhhhcchhhcCCchH
Confidence            4568999999994 7874 88889999999999999999999987 667765431     11233445678999999999


Q ss_pred             HHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhH-HHHHHhHhhhhhccCCCCCCCCCCCccc
Q 012536           81 RHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVL-LKSSLDSIFKVGFGVELNSLSGSDDFGN  159 (461)
Q Consensus        81 ~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~  159 (461)
                      +++|++++++|++++++.+.+ .+++.++.+++.+.    +++.+|+...+ ..+++++++.+ ||.+.+..       .
T Consensus        89 ~~~Rr~~~~~fs~~~l~~~~~-~i~~~~~~ll~~l~----~~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~-------~  155 (404)
T 3ejb_B           89 RRLRTLASGAFTPRTTESYQP-YIIETVHHLLDQVQ----GKKKMEVISDFAFPLASFVIANI-IGVPEEDR-------E  155 (404)
T ss_dssp             HHHHHHHHGGGSHHHHHTTHH-HHHHHHHHHHHTTT----TTSEEEHHHHTHHHHHHHHHHHH-HTCCGGGH-------H
T ss_pred             HHHHHHHHhhcCHHHHHHHHH-HHHHHHHHHHHHhh----hcCCcchHHHHHHHHHHHHHHHH-cCCCHHHH-------H
Confidence            999999999999999999986 67788888888764    34578986554 56999999984 89765321       2


Q ss_pred             hHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccCC
Q 012536          160 QFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEK  239 (461)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~~  239 (461)
                      .+.+.........    ..+       ......+...++...+.+++.+.++++++.        ...|+++.|+ +. .
T Consensus       156 ~~~~~~~~~~~~~----~~p-------~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~ll-~~-~  214 (404)
T 3ejb_B          156 QLKEWAASLIQTI----DFT-------RSRKALTEGNIMAVQAMAYFKELIQKRKRH--------PQQDMISMLL-KG-R  214 (404)
T ss_dssp             HHHHHHHHHHGGG----STT-------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHH-HC--
T ss_pred             HHHHHHHHHHHhc----cCC-------CCHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------CcchHHHHHH-hc-c
Confidence            2222222211110    001       011233456677888888999988888753        4578999999 43 3


Q ss_pred             CCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcChHH
Q 012536          240 DPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYL  319 (461)
Q Consensus       240 ~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l  319 (461)
                      ++..++++++.+++..+++||+|||+.+++|++++|++||++|+|+++|++                           |+
T Consensus       215 ~~~~ls~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~---------------------------~l  267 (404)
T 3ejb_B          215 EKDKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPD---------------------------LI  267 (404)
T ss_dssp             ---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG---------------------------GH
T ss_pred             cCCCCCHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH---------------------------HH
Confidence            345699999999999999999999999999999999999999999998732                           68


Q ss_pred             HHHHHHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCccc
Q 012536          320 HAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFA  399 (461)
Q Consensus       320 ~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~  399 (461)
                      +|||+|++|++|+++...|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+||||.          ..++
T Consensus       268 ~a~i~E~lRl~p~~~~~~R~~~~d~~~-~g~~ip~Gt~v~~~~~~~~rdp~~~-~dp~~F~p~R~~----------~~~~  335 (404)
T 3ejb_B          268 GTAVEECLRYESPTQMTARVASEDIDI-CGVTIRQGEQVYLLLGAANRDPSIF-TNPDVFDITRSP----------NPHL  335 (404)
T ss_dssp             HHHHHHHHHHSCSBCEEEEEESSCEEE-TTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTCSS----------CCCC
T ss_pred             HHHHHHHHHhCCcccccceEeCCCeEE-CCEEECCCCEEEecHHHhCCChhhC-CCcceeCCCCCC----------CCCC
Confidence            999999999999999778888888777 9999999999999999999999999 999999999982          2478


Q ss_pred             ccCCCCCCCCChHHHHHHHHHHHHHhccce-EEEeecCCCccceeeeEEEeeCCceeeEEeeC
Q 012536          400 AFQAGPRICPGKEFAYRQMKILAAVLLQFF-RFKLVDETKEATYRTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       400 ~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  461 (461)
                      |||+|+|.|+|++||++|++++++.|+++| +++++++  ++.+..+..+.....++|+++||
T Consensus       336 ~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~--~~~~~~~~~~~~~~~lpv~~~~~  396 (404)
T 3ejb_B          336 SFGHGHHVCLGSSLARLEAQIAINTLLQRMPSLNLADF--EWRYRPLFGFRALEELPVTFEAS  396 (404)
T ss_dssp             TTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEEC----CCCBCSCSSBCCBSCCEEECC--
T ss_pred             CCCCcCccCcCHHHHHHHHHHHHHHHHHhCcccccCCC--CceeccCcccCCcceeEEEEecc
Confidence            999999999999999999999999999999 9999853  34444445556667889888876


No 33 
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=2.3e-61  Score=453.86  Aligned_cols=378  Identities=17%  Similarity=0.170  Sum_probs=301.8

Q ss_pred             cchhhhhHHHHHHHHhcCc-EEEec-CCCCeEEecChhhHHhhhhcCccccCCCh-hhHHH-----------hHhhc-cC
Q 012536            6 IHFSRLFDYQTSLAKKYRT-FRLLQ-PSCSEIFTTDPVNIEHILKTNFSNYGKGD-YNWNL-----------MRDLF-GD   70 (461)
Q Consensus         6 ~~~~~~~~~~~~~~~~yg~-~~~~~-~~~~~v~v~dp~~~~~il~~~~~~f~~~~-~~~~~-----------~~~~~-g~   70 (461)
                      ...++++.++.++ ++||+ |++.+ ++.++++|+||++++++|.++ . +++++ .+...           +.... +.
T Consensus        14 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (411)
T 1gwi_A           14 PFVTDLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDP-R-LVKDINVWGAWRRGEIPADWPLIGLANPGR   90 (411)
T ss_dssp             TTCSCHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCT-T-EECCGGGCHHHHTTCSCTTCTTHHHHSCCS
T ss_pred             cccCChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCC-c-cccCcccccccccccCCcccchhhhhcccc
Confidence            3456899999999 89985 77776 788999999999999999986 2 45443 11111           00012 46


Q ss_pred             ceeeeCChhHHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHH-HHHHhHhhhhhccCCCC
Q 012536           71 GIFAVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLL-KSSLDSIFKVGFGVELN  149 (461)
Q Consensus        71 ~l~~~~~~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~-~~~~~~i~~~~fG~~~~  149 (461)
                      ++++.+++.|+++|++++++|++++++.+.+ .+++.++.+++.+.+   .++++|+...+. .+++++++. +||.+.+
T Consensus        91 ~l~~~~g~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~  165 (411)
T 1gwi_A           91 SMLTVDGAEHRRLRTLVAQALTVRRVEHMRG-RITELTDRLLDELPA---DGGVVDLKAAFAYPLPMYVVAD-LMGIEEA  165 (411)
T ss_dssp             SGGGCCHHHHHHHHHHHTTTSCHHHHHTTHH-HHHHHHHHHHHTSCC---SCCCEEHHHHTTTHHHHHHHHH-HHTCCGG
T ss_pred             ccccCCcHHHHHHHHHHHHhcCHHHHHHHHH-HHHHHHHHHHHHHHH---cCCCcchHHHHhhHHHHHHHHH-HhCCCHH
Confidence            7888999999999999999999999999986 778888888887752   356899998876 599999996 7997653


Q ss_pred             CCCCCCCccchHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhH
Q 012536          150 SLSGSDDFGNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDI  229 (461)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  229 (461)
                      .       ...+.+.+......                 ....+...++...+.+++.+.++++++.        ...|+
T Consensus       166 ~-------~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~  213 (411)
T 1gwi_A          166 R-------LPRLKVLFEKFFST-----------------QTPPEEVVATLTELASIMTDTVAAKRAA--------PGDDL  213 (411)
T ss_dssp             G-------HHHHHHHHHHHHCT-----------------TSCHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSH
T ss_pred             H-------HHHHHHHHHHHhcc-----------------CCChHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCH
Confidence            1       12233322221110                 0112345567778888999998887753        33689


Q ss_pred             HHHHhhccCCCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhccc
Q 012536          230 LSRFLLESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVT  309 (461)
Q Consensus       230 l~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~  309 (461)
                      ++.|+.+.+ ++..++++++.+++..+++||+|||+.+++|++++|++||++|+++++|+                    
T Consensus       214 l~~ll~~~~-~~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~--------------------  272 (411)
T 1gwi_A          214 TSALIQASE-NGDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGE--------------------  272 (411)
T ss_dssp             HHHHHHCCB-TTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTS--------------------
T ss_pred             HHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhChHHHHHHHcCh--------------------
Confidence            999998754 24469999999999999999999999999999999999999999999751                    


Q ss_pred             HHHhhcChHHHHHHHHhhcCCCCCCC-CCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCC
Q 012536          310 EAALEKMHYLHAALSETLRLYPAVPV-DGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNG  388 (461)
Q Consensus       310 ~~~l~~lp~l~a~i~E~lRl~~~~~~-~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~  388 (461)
                             +||+|||+|++|++|+++. ..|.+.+|.++ +||.||||+.|.++.+++||||++||+||++|+||||..  
T Consensus       273 -------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeRf~~--  342 (411)
T 1gwi_A          273 -------AEWSAVVEETLRFSTPTSHVLIRFAAEDVPV-GDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTSG--  342 (411)
T ss_dssp             -------SCHHHHHHHHHHHSCSBCCEEEEEESSCEEE-TTEEECTTCEEEECHHHHTTCHHHHCGGGGSCCTTCCCS--
T ss_pred             -------HHHHHHHHHHHHhCCcccCCceeeeCCCeEE-CCEEECCCCEEEecHHHhcCChhhcCCChhhcCCCCCCC--
Confidence                   3699999999999999996 67888888777 999999999999999999999999999999999999952  


Q ss_pred             ccCCCCCCcccccCCCCCCCCChHHHHHHHHHHHHHhccce-EEEeecCCCccceeeeEEEeeCCceeeEEeeC
Q 012536          389 VFRSESPYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFF-RFKLVDETKEATYRTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       389 ~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  461 (461)
                             ..++|||+|+|.|+|++||++|++++++.|+++| ++++..+..++.........+..++++++++|
T Consensus       343 -------~~~lpFG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~lpv~~~~r  409 (411)
T 1gwi_A          343 -------NRHISFGHGPHVCPGAALSRMEAGVALPALYARFPHLDLAVPAAELRNKPVVTQNDLFELPVRLAHH  409 (411)
T ss_dssp             -------SCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCSCTTBCCBSCCEEESSCC
T ss_pred             -------CCcccCCCCcccCCCHHHHHHHHHHHHHHHHHhCccceeCCCcccccccccccccCcceeEEEecCC
Confidence                   3689999999999999999999999999999999 79997543344444444456777899999887


No 34 
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=100.00  E-value=8.6e-61  Score=448.77  Aligned_cols=375  Identities=18%  Similarity=0.220  Sum_probs=299.7

Q ss_pred             hhhhhHHHHHHHHhcCcEEEecCCCCeEEecChhhHHhhhhcCccccCCChhhHH--------HhHhhccCceeeeCChh
Q 012536            8 FSRLFDYQTSLAKKYRTFRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWN--------LMRDLFGDGIFAVDGDK   79 (461)
Q Consensus         8 ~~~~~~~~~~~~~~yg~~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~--------~~~~~~g~~l~~~~~~~   79 (461)
                      ..+|+.++.++ ++||++...  |.++++|+||+.++++|.+  ..|++++....        .+..+.+.++++.+++.
T Consensus        12 ~~~p~~~~~~l-~~yGpv~~~--g~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~   86 (397)
T 3buj_A           12 RRDPYPSYHWL-LRHDPVHRG--AHRVWYVSRFADVRAVLGD--ERFARTGIRRFWTDLVGPGLLAEIVGDIILFQDEPD   86 (397)
T ss_dssp             HHCCHHHHHHH-HHHCSEEEC--GGGCEEECSHHHHHHHHTC--TTEESHHHHHHHHHHHCSSHHHHHHTTCGGGCCTTH
T ss_pred             ccCchHHHHHH-HhcCCeeeC--CCCeEEEcCHHHHHHHHcC--CCcccCcccccccccccccccccccccccccCCchh
Confidence            45889999888 489864334  6889999999999999987  36777543221        12222267888899999


Q ss_pred             HHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHH-hHHHHHHhHhhhhhccCCCCCCCCCCCcc
Q 012536           80 WRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQD-VLLKSSLDSIFKVGFGVELNSLSGSDDFG  158 (461)
Q Consensus        80 ~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~-~~~~~~~~~i~~~~fG~~~~~~~~~~~~~  158 (461)
                      |+++|++++++|+++.++.+.+ .+++.++.+++.+..    ++++|+.. +...+++++++.+ ||.+.+..       
T Consensus        87 h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~----~~~~dl~~~~~~~~~~~vi~~~-~G~~~~~~-------  153 (397)
T 3buj_A           87 HGRLRGVVGPAFSPSALRRLEP-VIAGTVDDLLRPALA----RGAMDVVDELAYPLALRAVLGL-LGLPAADW-------  153 (397)
T ss_dssp             HHHHHHHHGGGSSTTTTGGGHH-HHHHHHHHHHHHHHT----TTEEEHHHHTHHHHHHHHHHHH-HTCCGGGH-------
T ss_pred             HHHHHHHHHHhcCHHHHHHHHH-HHHHHHHHHHHHHhh----cCCeehHHHHHHHhHHHHHHHH-hCCCHHHH-------
Confidence            9999999999999999999986 778889999988863    34799875 5578999999998 99876421       


Q ss_pred             chHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccC
Q 012536          159 NQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESE  238 (461)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~  238 (461)
                      ..+...........     ..      .++....++..++...+.+++.+.++++++.        ..+|+++.|+.+.+
T Consensus       154 ~~~~~~~~~~~~~~-----~~------~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~~ll~~~~  214 (397)
T 3buj_A          154 GAVGRWSRDVGRTL-----DR------GASAEDMRRGHAAIAEFADYVERALARRRRE--------GGEDLLALMLDAHD  214 (397)
T ss_dssp             HHHHHHHHHHHGGG-----CS------SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------CCCSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhc-----CC------CCChHHHHHHHHHHHHHHHHHHHHHHHHHcC--------CCCCHHHHHHHhhh
Confidence            22322222211110     00      0111233456677788889999999888764        23689999998753


Q ss_pred             CCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcChH
Q 012536          239 KDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHY  318 (461)
Q Consensus       239 ~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~  318 (461)
                      + +. ++++++.+++..+++||+|||+.+++|++++|++||++|+|+++|+                           .|
T Consensus       215 ~-~~-ls~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~---------------------------~~  265 (397)
T 3buj_A          215 R-GL-MSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRRRP---------------------------DL  265 (397)
T ss_dssp             T-TS-SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHCG---------------------------GG
T ss_pred             c-CC-CCHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhCHHHHHHHhhCH---------------------------HH
Confidence            2 33 9999999999999999999999999999999999999999999873                           27


Q ss_pred             HHHHHHHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCcc
Q 012536          319 LHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKF  398 (461)
Q Consensus       319 l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~  398 (461)
                      |+|||+|++|++|+++...|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+||||.          ..+
T Consensus       266 l~a~i~E~lRl~p~~~~~~R~~~~d~~~-~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~~----------~~~  333 (397)
T 3buj_A          266 LAQAVEECLRYDPSVQSNTRQLDVDVEL-RGRRLRRDDVVVVLAGAANRDPRRY-DRPDDFDIERDP----------VPS  333 (397)
T ss_dssp             HHHHHHHHHHHSCSCCEEEEEESSCEEE-TTEEECTTCEEEEEHHHHTTCTTTC-SSTTSCCTTSCC----------CCC
T ss_pred             HHHHHHHHHhhcCcccCcceEECCCEEE-CCEEECCCCEEEEChhhhCCCcccc-CCccccCCCCCC----------CCC
Confidence            9999999999999999778888888777 9999999999999999999999999 999999999994          247


Q ss_pred             cccCCCCCCCCChHHHHHHHHHHHHHhccce-EEEeecCCCccceeeeEEEeeCCceeeEEeeC
Q 012536          399 AAFQAGPRICPGKEFAYRQMKILAAVLLQFF-RFKLVDETKEATYRTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       399 ~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  461 (461)
                      +|||+|+|.|+|++||++|++++++.| ++| +++++++..++.+.....+.+..+++|+++||
T Consensus       334 ~~FG~G~r~C~G~~lA~~e~~~~l~~l-~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~r  396 (397)
T 3buj_A          334 MSFGAGMRYCLGSYLARTQLRAAVAAL-ARLPGLRLGCASDALAYQPRTMFRGLASLPIAFTPG  396 (397)
T ss_dssp             STTCCGGGCCTTHHHHHHHHHHHHHHH-HTSTTCEESSCSTTCCBCSCSSCCCBSCCEEECCTT
T ss_pred             CCCCCCCccCCCHHHHHHHHHHHHHHH-hcCCCceeCCCCcccccccccccCCCcceeEEecCC
Confidence            899999999999999999999999999 999 89998753344444445566778999999887


No 35 
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=100.00  E-value=2.8e-61  Score=452.65  Aligned_cols=375  Identities=14%  Similarity=0.154  Sum_probs=301.0

Q ss_pred             ccchhhhhHHHHHHHHhcCc-EEEecCC--CCeEEecChhhHHhhhhcCccccCCChhhHH---HhHhhc---cCceeee
Q 012536            5 LIHFSRLFDYQTSLAKKYRT-FRLLQPS--CSEIFTTDPVNIEHILKTNFSNYGKGDYNWN---LMRDLF---GDGIFAV   75 (461)
Q Consensus         5 ~~~~~~~~~~~~~~~~~yg~-~~~~~~~--~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~---~~~~~~---g~~l~~~   75 (461)
                      +.+.+++|.++.+++ +||+ |++.+++  +++++|++|+.+++|+.++  .|++++....   .+....   +.++++.
T Consensus        23 ~~~g~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~   99 (411)
T 2dkk_A           23 DLDGPEFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITNDP--RFGRAEVTQRQITRLAPHFKPRPGSLAFA   99 (411)
T ss_dssp             CCSSSCCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTCT--TEESGGGGGSCBCBSSSCCCCCTTCSTTC
T ss_pred             ccccccccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcCC--CcccCCCCCCCccccccchhccccccccC
Confidence            345567779999998 7975 6666654  7899999999999999873  6777654321   122222   5678889


Q ss_pred             CChhHHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHH-HHHHhHhhhhhccCCCCCCCCC
Q 012536           76 DGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLL-KSSLDSIFKVGFGVELNSLSGS  154 (461)
Q Consensus        76 ~~~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~-~~~~~~i~~~~fG~~~~~~~~~  154 (461)
                      +++.|+++|++++++|++++++.+.+ .+++.++.+++.+..   .+.++|+...+. .+++++++. +||.+.+.    
T Consensus       100 dg~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~---~g~~~dl~~~~~~~~~~~vi~~-l~G~~~~~----  170 (411)
T 2dkk_A          100 DQPDHNRLRRAVAGAFTVGATKRLRP-RAQEILDGLVDGILA---EGPPADLVERVLEPFPIAVVSE-VMGVPAAD----  170 (411)
T ss_dssp             CTTHHHHHHHHHGGGSSHHHHHHHHH-HHHHHHHHHHHHHHH---HCSCEEHHHHTTTHHHHHHHHH-HHTCCSSH----
T ss_pred             CchHHHHHHHHhhHhhCHHHHHHHHH-HHHHHHHHHHHHHHh---cCCCeehHHHHHHHHHHHHHHH-HhCCCHHH----
Confidence            99999999999999999999999986 778899999998875   245799997775 699999998 59987642    


Q ss_pred             CCccchHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHh
Q 012536          155 DDFGNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFL  234 (461)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll  234 (461)
                         ...+...+......               .  ...+...++...+.+++.+.++++++.        ..+|+++.|+
T Consensus       171 ---~~~~~~~~~~~~~~---------------~--~~~~~~~~~~~~l~~~~~~~i~~r~~~--------~~~dll~~ll  222 (411)
T 2dkk_A          171 ---RERVHSWTRQIIST---------------S--GGAEAAERAKRGLYGWITETVRARAGS--------EGGDVYSMLG  222 (411)
T ss_dssp             ---HHHHHHHHGGGCSS---------------C--SCSHHHHHHHHHHHHHHHHHHHTTTTC--------CSSCHHHHHH
T ss_pred             ---HHHHHHHHHHHHhc---------------c--chHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHH
Confidence               02222222221110               0  022445567778888888888776543        3468999999


Q ss_pred             hccCCCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhh
Q 012536          235 LESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALE  314 (461)
Q Consensus       235 ~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~  314 (461)
                      .+  .++..++++++.+++..+++|| |||+.+++|++++|++||++|++|++|++                        
T Consensus       223 ~~--~~~~~ls~~el~~~~~~l~~AG-eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------------  275 (411)
T 2dkk_A          223 AA--VGRGEVGETEAVGLAGPLQIGG-EAVTHNVGQMLYLLLTRRELMARMRERPG------------------------  275 (411)
T ss_dssp             HH--HHTTSSCTTSHHHHHHHHHHTH-HHHHHHHHHHHHHHHHSHHHHHHHHHCTT------------------------
T ss_pred             Hh--cCCCCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------------
Confidence            87  2345699999999999999999 99999999999999999999999998842                        


Q ss_pred             cChHHHHHHHHhhcCCCCCC-C-CCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCC
Q 012536          315 KMHYLHAALSETLRLYPAVP-V-DGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRS  392 (461)
Q Consensus       315 ~lp~l~a~i~E~lRl~~~~~-~-~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~  392 (461)
                         ||+|||+|++|++|+++ . ..|.+.+|.++ +|+.||+|+.|.++.+++||||++| +||++|+|+||.       
T Consensus       276 ---~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~f-~dp~~F~PeR~~-------  343 (411)
T 2dkk_A          276 ---ARGTALDELLRWISHRTSVGLARIALEDVEV-HGTRIAAGEPVYVSYLAANRDPDVF-PDPDRIDLDRDP-------  343 (411)
T ss_dssp             ---CCHHHHHHHHHHSCCBSSCCCCEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCCSCSS-------
T ss_pred             ---HHHHHHHHHHhhCCccccCccceEECCCEEE-CCEEECCCCEEEeChhhhcCChhhC-CCCCCCCCCCCC-------
Confidence               68999999999999999 7 78888888777 9999999999999999999999999 999999999995       


Q ss_pred             CCCCcccccCCCCCCCCChHHHHHHHHHHHHHhccce-EEEeecCCCccceeeeEEEeeCCceeeEEeeC
Q 012536          393 ESPYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFF-RFKLVDETKEATYRTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       393 ~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  461 (461)
                         ..++|||+|+|.|+|++||++|++++++.|+++| +++++++..++.+.....+.+..+++|++++|
T Consensus       344 ---~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~~R  410 (411)
T 2dkk_A          344 ---NPHLAYGNGHHFCTGAVLARMQTELLVDTLLERLPGLRLAVPAEQVAWRRKTMIRGPRTLPCTWHHH  410 (411)
T ss_dssp             ---CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGCCBCCSSSBCCBSCCEEECCCC
T ss_pred             ---CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCCCcEECCCccccccccCcccCCcceeEEEeccC
Confidence               2589999999999999999999999999999999 89998653344444444556777899999887


No 36 
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=100.00  E-value=4.5e-61  Score=451.04  Aligned_cols=374  Identities=16%  Similarity=0.168  Sum_probs=301.8

Q ss_pred             hhhhhHHHHHHHHhcCc-EEEec-CCCCeEEecChhhHHhhhhcCccccCCChh--h-HH--HhHh-hccCceeeeCChh
Q 012536            8 FSRLFDYQTSLAKKYRT-FRLLQ-PSCSEIFTTDPVNIEHILKTNFSNYGKGDY--N-WN--LMRD-LFGDGIFAVDGDK   79 (461)
Q Consensus         8 ~~~~~~~~~~~~~~yg~-~~~~~-~~~~~v~v~dp~~~~~il~~~~~~f~~~~~--~-~~--~~~~-~~g~~l~~~~~~~   79 (461)
                      ..+++.++.+| ++||+ |++.+ +++++++|+||+++++++.++  .|++++.  + ..  .+.. ..+.++++.+++.
T Consensus        18 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~   94 (403)
T 3aba_A           18 PFLPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKPGRGSLLWQDEPE   94 (403)
T ss_dssp             TTSCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCCCTTCCTTCCTTH
T ss_pred             ccChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCC--CcccccccccccccccccccccccccccCCchh
Confidence            46899999999 88975 77776 789999999999999999985  4666531  1 10  1212 1356788899999


Q ss_pred             HHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhH-HHHHHhHhhhhhccCCCCCCCCCCCcc
Q 012536           80 WRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVL-LKSSLDSIFKVGFGVELNSLSGSDDFG  158 (461)
Q Consensus        80 ~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~  158 (461)
                      |+++|++++++|+++.++.+.+ .+++.++.+++.+.+   .++++|+...+ ..+++++++. +||.+.+.       .
T Consensus        95 h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~ll~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-------~  162 (403)
T 3aba_A           95 HTSDRKLLAKEFTVRRMQALRP-NIQRIVDEHLDAIEA---RGGPVDLVKTFANAVPSMVISD-LFGVPVER-------R  162 (403)
T ss_dssp             HHHHHHHHHHHSCHHHHHTTHH-HHHHHHHHHHHHHHH---HCSCEEHHHHTTTHHHHHHHHH-HHTCCGGG-------H
T ss_pred             HHHHHHHHHhhcCHHHHHHHHH-HHHHHHHHHHHHHHh---cCCCccHHHHHHHHHHHHHHHH-HcCCCHHH-------H
Confidence            9999999999999999999986 778899999998874   24589999665 5799999998 79976531       0


Q ss_pred             chHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccC
Q 012536          159 NQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESE  238 (461)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~  238 (461)
                      ..+...+......               ...+  +...++...+.+++.+.++++++.        ...|+++.|+.+.+
T Consensus       163 ~~~~~~~~~~~~~---------------~~~p--~~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~~ll~~~~  217 (403)
T 3aba_A          163 AEFQDIAEAMMRV---------------DQDA--AATEAAGMRLGGLLYQLVQERRAN--------PGDDLISALITTED  217 (403)
T ss_dssp             HHHHHHHHHHSBS---------------SSCH--HHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHTSCC
T ss_pred             HHHHHHHHHHHhc---------------cCcH--HHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHhhcc
Confidence            2222222211110               0001  445677778888999999888764        23689999998754


Q ss_pred             CCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcChH
Q 012536          239 KDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHY  318 (461)
Q Consensus       239 ~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~  318 (461)
                       ++..++++++.+++..+++||+|||+.+++|++++|++||++|+++++|+                           .|
T Consensus       218 -~~~~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~---------------------------~~  269 (403)
T 3aba_A          218 -PDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLREDP---------------------------SL  269 (403)
T ss_dssp             -TTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG---------------------------GG
T ss_pred             -CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCH---------------------------HH
Confidence             34569999999999999999999999999999999999999999999873                           26


Q ss_pred             HHHHHHHhhcCCCCCC-CCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCc
Q 012536          319 LHAALSETLRLYPAVP-VDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYK  397 (461)
Q Consensus       319 l~a~i~E~lRl~~~~~-~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~  397 (461)
                      |+|||+|++|++|+++ ...|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+||||.          ..
T Consensus       270 l~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~~----------~~  337 (403)
T 3aba_A          270 VGNAVEELLRYLTIGQFGGERVATRDVEL-GGVRIAKGEQVVAHVLAADFDPAFV-EEPERFDITRRP----------AP  337 (403)
T ss_dssp             HHHHHHHHHHHHCSCTTCEEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTSCC----------CC
T ss_pred             HHHHHHHHHhcCCCcccccceEeCCCeEE-CCEEECCCCEEEechhhhCCChhhC-CCccccCCCCCC----------CC
Confidence            9999999999999999 668888888777 9999999999999999999999999 999999999983          25


Q ss_pred             ccccCCCCCCCCChHHHHHHHHHHHHHhccce-EEEeecCCCccceeeeEEEeeCCceeeEEeeC
Q 012536          398 FAAFQAGPRICPGKEFAYRQMKILAAVLLQFF-RFKLVDETKEATYRTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       398 ~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  461 (461)
                      ++|||+|+|.|+|++||++|++++++.|+++| +++++++..++.+..+....+..+++|++++|
T Consensus       338 ~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~~r  402 (403)
T 3aba_A          338 HLAFGFGAHQCIGQQLARIELQIVFETLFRRLPGLRLAKPVEELRFRHDMVFYGVHELPVTWHHH  402 (403)
T ss_dssp             CSTTCCGGGSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBCTTBSSCCBSCCEEECCCC
T ss_pred             ccCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCceecCCccccccccCcccCCcceeEEEecCC
Confidence            79999999999999999999999999999999 59987643344444445556777899999887


No 37 
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=1.9e-60  Score=447.75  Aligned_cols=377  Identities=20%  Similarity=0.203  Sum_probs=300.5

Q ss_pred             chhhhhHHHHHHHHhcCc-EEEecCCCCeEEecChhhHHhhhhcCccccCCChh--hH---HHh------HhhccCceee
Q 012536            7 HFSRLFDYQTSLAKKYRT-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDY--NW---NLM------RDLFGDGIFA   74 (461)
Q Consensus         7 ~~~~~~~~~~~~~~~yg~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~--~~---~~~------~~~~g~~l~~   74 (461)
                      ..++++.++.+| ++||+ |++.+++.++++|+||+++++|+.++  .+++++.  +.   ...      ....+.++++
T Consensus        13 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   89 (408)
T 1odo_A           13 TGADHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSS--DVSKDARAHWPAFGEVVGTWPLALWVAVENMFT   89 (408)
T ss_dssp             TCTTHHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCT--TEESCHHHHCTTHHHHTTTCTTTHHHHCCSGGG
T ss_pred             ccCChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCC--Ccccccccccccccccccccccccccccccccc
Confidence            456899999999 99985 77777888999999999999999876  2455442  11   010      0113467888


Q ss_pred             eCChhHHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHH-HHHHhHhhhhhccCCCCCCCC
Q 012536           75 VDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLL-KSSLDSIFKVGFGVELNSLSG  153 (461)
Q Consensus        75 ~~~~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~-~~~~~~i~~~~fG~~~~~~~~  153 (461)
                      .+++.|+++|++++++|++++++.+.+ .+++.++.+++.+.+. ..++++|+...+. .+++++++. +||.+.+.   
T Consensus        90 ~~g~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~~-~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~---  163 (408)
T 1odo_A           90 AYGPNHRKLRRLVAPAFSARRVDAMRP-AVEAMVTGLVDRLAEL-PAGEPVDLRQELAYPLPIAVIGH-LMGVPQDR---  163 (408)
T ss_dssp             CCHHHHHHHHHTTGGGGSHHHHHHHHH-HHHHHHHHHHHHHHHS-CTTSCEEHHHHTTTHHHHHHHHH-HHTCCHHH---
T ss_pred             cCChHHHHHHHHhhhhcCHHHHHHHHH-HHHHHHHHHHHHHHhh-cCCCCcchHHHHhhhhHHHHHHH-HhCCCHHH---
Confidence            999999999999999999999999986 7788999999998753 2356899998887 599999996 79976421   


Q ss_pred             CCCccchHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHH
Q 012536          154 SDDFGNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRF  233 (461)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~l  233 (461)
                          ...+.+.+......                 ....++..++...+.+++.+.++++++.        ...|+++.|
T Consensus       164 ----~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~l  214 (408)
T 1odo_A          164 ----RDGFRALVDGVFDT-----------------TLDQAEAQANTARLYEVLDQLIAAKRAT--------PGDDMTSLL  214 (408)
T ss_dssp             ----HHHHHHHHHHHHCT-----------------TCCHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHH
T ss_pred             ----HHHHHHHHHHHhcc-----------------cCCHHHHHHHHHHHHHHHHHHHHHHhhC--------CCCCHHHHH
Confidence                02222222221110                 0112345567778888999998887753        236899999


Q ss_pred             hhccCCC--CCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHH
Q 012536          234 LLESEKD--PESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEA  311 (461)
Q Consensus       234 l~~~~~~--~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~  311 (461)
                      +.+..++  +..++++++.+++..+++||+|||+.+++|++++|++||++|+||++|+                      
T Consensus       215 l~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~----------------------  272 (408)
T 1odo_A          215 IAARDDEGDGDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKGE----------------------  272 (408)
T ss_dssp             HHHHCC-----CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHTS----------------------
T ss_pred             HHhcccccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCH----------------------
Confidence            9876432  4569999999999999999999999999999999999999999999862                      


Q ss_pred             HhhcChHHHHHHHHhhcCCCCCCC-CCccccccccccC-CeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCc
Q 012536          312 ALEKMHYLHAALSETLRLYPAVPV-DGKNAAEDDILPD-GFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGV  389 (461)
Q Consensus       312 ~l~~lp~l~a~i~E~lRl~~~~~~-~~r~~~~~~~~~~-g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~  389 (461)
                           +||+|||+|++|++|+++. ..|.+.+|.++ + ||.||||+.|.++.+++||||++| +||++|+||||     
T Consensus       273 -----~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l-~~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~-----  340 (408)
T 1odo_A          273 -----VTWADVVEETLRHEPAVKHLPLRYAVTDIAL-PDGRTIARGEPILASYAAANRHPDWH-EDADTFDATRT-----  340 (408)
T ss_dssp             -----SCHHHHHHHHHHHSCSBSCEEEEEESSCEEC-TTSCEECTTCEEEECHHHHTTCTTTS-TTTTSCCTTCS-----
T ss_pred             -----HHHHHHHHHHHhhCCCccCCcceEeCCCeEc-CCCcEECCCCEEEeChhhhcCChhhc-CCccccCCCCC-----
Confidence                 2589999999999999996 67888888777 8 999999999999999999999999 99999999994     


Q ss_pred             cCCCCCCcccccCCCCCCCCChHHHHHHHHHHHHHhccce-EEEeecCCCccceeeeEEEeeCCceeeEEee
Q 012536          390 FRSESPYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFF-RFKLVDETKEATYRTMFTLHVDKGLHLYAYP  460 (461)
Q Consensus       390 ~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  460 (461)
                           ...++|||+|+|.|+|++||++|++++++.|+++| +++++.+..++.+.....+.+..+++|+++|
T Consensus       341 -----~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~  407 (408)
T 1odo_A          341 -----VKEHLAFGHGVHFCLGAPLARMEVTLALESLFGRFPDLRLADPAEELPPVPSLISNGHQRLPVLLHA  407 (408)
T ss_dssp             -----CCCCCTTCSSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESCTTSCCCBCSCSSBCCBSCCEEECC-
T ss_pred             -----CCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCcceecCCccccccccCccccCcccceEEecC
Confidence                 23689999999999999999999999999999999 7999754445555555666777889998876


No 38 
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=100.00  E-value=1.9e-60  Score=448.22  Aligned_cols=376  Identities=16%  Similarity=0.205  Sum_probs=298.1

Q ss_pred             hhhhhHHHHHHHHhcCcEEEecCCCCeEEecChhhHHhhhhcCccccCCChhhHHHhHh--hccCceeeeCChhHHHHHh
Q 012536            8 FSRLFDYQTSLAKKYRTFRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWNLMRD--LFGDGIFAVDGDKWRHQRK   85 (461)
Q Consensus         8 ~~~~~~~~~~~~~~yg~~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~~~~~--~~g~~l~~~~~~~~~~~R~   85 (461)
                      .++++.++.++++ ||++  +.++.++++|+||+.+++++.++ +.|++++...  +..  ..+.++++.+++.|+++|+
T Consensus        27 ~~~p~~~~~~l~~-~gpv--~~~~~~~~vv~~~~~v~~vl~~~-~~f~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~R~  100 (411)
T 2jjn_A           27 ETALLDWLGTMRE-KQPV--WQDRYGVWHVFRHADVQTVLRDT-ATFSSDPTRV--IEGASPTPGMIHEIDPPEHRALRK  100 (411)
T ss_dssp             HHHHHHHHHHHHH-HCSE--EECTTSCEEECSHHHHHHHHHCT-TTEESCGGGG--STTCCCCTTCGGGCCTTHHHHHHH
T ss_pred             ccChHHHHHHHHH-hCCc--ccCCCCeEEECCHHHHHHHHcCc-ccccCccccc--CCcccccccccccCCchHHHHHHH
Confidence            4689999999987 8877  56667899999999999999976 5788875422  222  2346788889999999999


Q ss_pred             hhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHH-HhHHHHHHhHhhhhhccCCCCCCCCCCCccchHHHH
Q 012536           86 LASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQ-DVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKA  164 (461)
Q Consensus        86 ~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~-~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~  164 (461)
                      +++++|++++++.+.+ .+++.++.+++.      .++++|+. ++...+++++++.+ ||.+.+..+    ....+.+.
T Consensus       101 ~~~~~fs~~~l~~~~~-~i~~~~~~ll~~------~~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~~----~~~~~~~~  168 (411)
T 2jjn_A          101 VVSSAFTPRTISDLEP-RIRDVTRSLLAD------AGESFDLVDVLAFPLPVTIVAEL-LGLPPMDHE----QFGDWSGA  168 (411)
T ss_dssp             HHHHHSCHHHHHTTHH-HHHHHHHHHHHT------SCSEEEHHHHTTTHHHHHHHHHH-HTCCSCCCS----TTCCHHHH
T ss_pred             HhhhhcCHHHHHHHHH-HHHHHHHHHHhc------CCCceeHHHHHHHHHHHHHHHHH-cCCCHHHHH----HHHHHHHH
Confidence            9999999999999986 667788888775      23479999 55568999999998 998865321    12223222


Q ss_pred             hhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccCCCCCCC
Q 012536          165 FDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEKDPESM  244 (461)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~l  244 (461)
                      +...        ..+.     ++.....++..++...+.+++.+.++++++.        ...|+++.|+++.. ++..+
T Consensus       169 ~~~~--------~~~~-----~~~p~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~ll~~~~-~~~~l  226 (411)
T 2jjn_A          169 LVDI--------QMDD-----PTDPALAERIADVLNPLTAYLKARCAERRAD--------PGDDLISRLVLAEV-DGRAL  226 (411)
T ss_dssp             HHHS--------CCSC-----TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHCCB-TTBCC
T ss_pred             HHhc--------cCcc-----ccchHHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHhccc-CCCCC
Confidence            2111        0010     0101223455677788888999999888763        34689999998754 34569


Q ss_pred             CHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcChHHHHHHH
Q 012536          245 TDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLHAALS  324 (461)
Q Consensus       245 ~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~  324 (461)
                      +++++.+++..+++||+|||+.+++|++++|++||++|+|+++|++                           ||+|||+
T Consensus       227 ~~~el~~~~~~~~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------------------~l~a~i~  279 (411)
T 2jjn_A          227 DDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAEDPG---------------------------RIPAIVE  279 (411)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHHHHHHCGG---------------------------GHHHHHH
T ss_pred             CHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------------------hHHHHHH
Confidence            9999999999999999999999999999999999999999998832                           7999999


Q ss_pred             HhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCcccccCCC
Q 012536          325 ETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAG  404 (461)
Q Consensus       325 E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~~Fg~G  404 (461)
                      |++|++|+++...|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+||||.+        ...++|||+|
T Consensus       280 E~lRl~p~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~~--------~~~~~pFG~G  349 (411)
T 2jjn_A          280 EVLRYRPPFPQMQRTTTKATEV-AGVPIPADVMVNTWVLSANRDSDAH-DDPDRFDPSRKSG--------GAAQLSFGHG  349 (411)
T ss_dssp             HHHHHSCSSCEEEEEESSCEEE-TTEEECSSCEEEEEHHHHHTCTTTS-SSTTSCCTTCCCS--------SCCCGGGCSS
T ss_pred             HHhhhCCCcCCcceEECCCeEE-CCEEECCCCEEEechhhhCCChhhc-CCccccCCCCCCC--------CCCccCCCCC
Confidence            9999999999878888888777 9999999999999999999999999 9999999999852        1358999999


Q ss_pred             CCCCCChHHHHHHHHHHHHHhccceE-EEeecCCCccceeeeEEEeeCCceeeEEeeC
Q 012536          405 PRICPGKEFAYRQMKILAAVLLQFFR-FKLVDETKEATYRTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       405 ~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  461 (461)
                      +|.|+|++||++|++++++.|+++|+ +++++ +.+++...........+++|+++||
T Consensus       350 ~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~-~~~~~~~~~~~~~~~~~lpv~~~~~  406 (411)
T 2jjn_A          350 VHFCLGAPLARLENRVALEEIIARFGRLTVDR-DDERLRHFEQIVLGTRHLPVLAGSS  406 (411)
T ss_dssp             TTCCTTHHHHHHHHHHHHHHHHHHHSCCEECC-SSCCCCBCCSSSSSBSCCEEECSCC
T ss_pred             CccCcCHHHHHHHHHHHHHHHHHhCCcceECC-CCceeccccccccCcceeEEEecCC
Confidence            99999999999999999999999996 99974 3333223333445566788887764


No 39 
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=100.00  E-value=2.8e-60  Score=446.07  Aligned_cols=369  Identities=15%  Similarity=0.191  Sum_probs=295.0

Q ss_pred             chhhhhHHHHHHHHhcCc-EEEe----c-CC-CCeEEecChhhHHhhh-hcCccccCCChh-hHH--HhH-h-hccCcee
Q 012536            7 HFSRLFDYQTSLAKKYRT-FRLL----Q-PS-CSEIFTTDPVNIEHIL-KTNFSNYGKGDY-NWN--LMR-D-LFGDGIF   73 (461)
Q Consensus         7 ~~~~~~~~~~~~~~~yg~-~~~~----~-~~-~~~v~v~dp~~~~~il-~~~~~~f~~~~~-~~~--~~~-~-~~g~~l~   73 (461)
                      ..++++.++.+| ++||+ |++.    + ++ .++|+|+||+++++|| .++  .|++++. ...  .+. . ..+.+++
T Consensus        22 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~   98 (406)
T 1ued_A           22 TNCDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHE--HFTTRPQFTQSKSGAHVEAQFVGQIS   98 (406)
T ss_dssp             ETTEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCS--SEECCCCC---------CGGGTTCGG
T ss_pred             CCCCcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCc--cccccccccccccccccccccccccc
Confidence            457899999999 99985 7777    5 67 8999999999999999 554  3555432 111  111 1 1345788


Q ss_pred             eeCChhHHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHHH-HHHhHhhhhhccCCCCCCC
Q 012536           74 AVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLLK-SSLDSIFKVGFGVELNSLS  152 (461)
Q Consensus        74 ~~~~~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~-~~~~~i~~~~fG~~~~~~~  152 (461)
                      +.+++.|+++|++++++|++++++.+.+ .+++.++.+++.+..   .++++|+...+.. +++++++ .+||.+.+.  
T Consensus        99 ~~~g~~~~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~---~g~~~d~~~~~~~~~~~~vi~-~~~G~~~~~--  171 (406)
T 1ued_A           99 TYDPPEHTRLRKMLTPEFTVRRIRRMEP-AIQSLIDDRLDLLEA---EGPSADLQGLFADPVGAHALC-ELLGIPRDD--  171 (406)
T ss_dssp             GCCTTHHHHHHHHHGGGSSHHHHHHHHH-HHHHHHHHHHHHHHH---HCTTEEHHHHTHHHHHHHHHH-HHHTCCHHH--
T ss_pred             cCCCHHHHHHHHHhhhhhCHHHHHHHHH-HHHHHHHHHHHHHHh---cCCCeeHHHHHHHHhHHHHHH-HHcCCCHHH--
Confidence            8899999999999999999999999986 778899999998863   3558999998875 9999999 579976421  


Q ss_pred             CCCCccchHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHH
Q 012536          153 GSDDFGNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSR  232 (461)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~  232 (461)
                           ...+.+.+......                 ....+...++...+.+++.+.++++++.        ...|+++.
T Consensus       172 -----~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~  221 (406)
T 1ued_A          172 -----QREFVRRIRRNADL-----------------SRGLKARAADSAAFNRYLDNLLARQRAD--------PDDGLLGM  221 (406)
T ss_dssp             -----HHHHHHHHHHCC--------------------CCHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHH
T ss_pred             -----HHHHHHHHHHHHhc-----------------cCCHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHH
Confidence                 12233332222110                 0112345677788888999999887763        33689999


Q ss_pred             HhhccCCCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHH
Q 012536          233 FLLESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAA  312 (461)
Q Consensus       233 ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~  312 (461)
                      |+.+.   +..++++++.+++..+++||+|||+.+++|++++|++||++|+|+++|+.                      
T Consensus       222 ll~~~---~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~----------------------  276 (406)
T 1ued_A          222 IVRDH---GDNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFESPE----------------------  276 (406)
T ss_dssp             HHHHH---GGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGTTHHHHCHH----------------------
T ss_pred             HHHhc---CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhChHHHHHHHhCHH----------------------
Confidence            99875   24589999999999999999999999999999999999999999998742                      


Q ss_pred             hhcChHHHHHHHHhhcCCCCCCC-CCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccC
Q 012536          313 LEKMHYLHAALSETLRLYPAVPV-DGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFR  391 (461)
Q Consensus       313 l~~lp~l~a~i~E~lRl~~~~~~-~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~  391 (461)
                           ||+|||+|++|++|+++. .+|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+||||-      
T Consensus       277 -----~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~~------  343 (406)
T 1ued_A          277 -----KAERVVNELVRYLSPVQAPNPRLAIKDVVI-DGQLIKAGDYVLCSILMANRDEALT-PDPDVLDANRAA------  343 (406)
T ss_dssp             -----HHHHHHHHHHHHHCSSCSCSCEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTSCC------
T ss_pred             -----HHHHHHHHHHhcCCCcccCcceecCCCEEE-CCEEECCCCEEEecHHHhcCCchhC-CChhhcCCCCCC------
Confidence                 589999999999999996 68888888777 9999999999999999999999999 999999999982      


Q ss_pred             CCCCCcccccCCCCCCCCChHHHHHHHHHHHHHhccce-EEEeecCCCccceeeeEEEeeCCceeeEE
Q 012536          392 SESPYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFF-RFKLVDETKEATYRTMFTLHVDKGLHLYA  458 (461)
Q Consensus       392 ~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  458 (461)
                          ..++|||+|+|.|+|++||++|++++++.|+++| ++++..+..++.+....++.+ .+++|++
T Consensus       344 ----~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~-~~lpv~~  406 (406)
T 1ued_A          344 ----VSDVGFGHGIHYCVGAALARSMLRMAYQTLWRRFPGLRLAVPIEEVKYRSAFVDCP-DQVPVTW  406 (406)
T ss_dssp             ----CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCSSSCCB-SCCEEEC
T ss_pred             ----CCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCCceecCCcccccccccccccC-CeeeeeC
Confidence                3589999999999999999999999999999999 799975444555555555667 7777753


No 40 
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=100.00  E-value=1.5e-60  Score=447.21  Aligned_cols=371  Identities=14%  Similarity=0.131  Sum_probs=295.7

Q ss_pred             chhhhhHHHHHHHHhc--Cc-EEEecCCCCeEEecChhhHHhhhhcCccccCCChhhHHH-hHhhccCceeeeCChhHHH
Q 012536            7 HFSRLFDYQTSLAKKY--RT-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWNL-MRDLFGDGIFAVDGDKWRH   82 (461)
Q Consensus         7 ~~~~~~~~~~~~~~~y--g~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~~-~~~~~g~~l~~~~~~~~~~   82 (461)
                      ..++++.++.+|+++|  |+ |++..++ ++++|+||+.+++++++. +.|++++..... .....+.++++.+++.|++
T Consensus        17 ~~~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   94 (398)
T 4fb2_A           17 PDGTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVIQNT-KAFSNKGVTFPRYETGEFELMMAGQDDPVHKK   94 (398)
T ss_dssp             TTSSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHHTCC-SSEEGGGCSSSCC----CCCTTTTCCTTHHHH
T ss_pred             hhcChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHHhCh-hhccCCcccccCCCCcccccCcccCCchHHHH
Confidence            5678999999999999  86 6666654 699999999999999654 678876544321 1111224567889999999


Q ss_pred             HHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhH-HHHHHhHhhhhhccCCCCCCCCCCCccchH
Q 012536           83 QRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVL-LKSSLDSIFKVGFGVELNSLSGSDDFGNQF  161 (461)
Q Consensus        83 ~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~  161 (461)
                      +|++++++|++++++.+.+ .+++.++.+++.+.+    ++.+|+...+ ..+++++++. +||.+.+.       ...+
T Consensus        95 ~R~~~~~~f~~~~l~~~~~-~i~~~~~~l~~~l~~----~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-------~~~~  161 (398)
T 4fb2_A           95 YRQLVAKPFSPEATDLFTE-QLRQSTNDLIDARIE----LGEGDAATWLANEIPARLTAI-LLGLPPED-------GDTY  161 (398)
T ss_dssp             HHHHHHTTTCHHHHHTTHH-HHHHHHHHHHHTTTT----TTEEEHCCCCCTTHHHHHHHH-HTTSCGGG-------HHHH
T ss_pred             HHHHHHHhhCHHHHHHHHH-HHHHHHHHHHHHHhh----cCCccHHHHHHHHHHHHHHHH-HcCCCHHH-------HHHH
Confidence            9999999999999999986 677888888887643    3468976555 6899999999 68866431       1223


Q ss_pred             HHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccCCCC
Q 012536          162 TKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEKDP  241 (461)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~  241 (461)
                      .+.+.....                  ....+...++...+.+++.+.++++++.        ...|+++.|+.+.. ++
T Consensus       162 ~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~ll~~~~-~~  214 (398)
T 4fb2_A          162 RRWVWAITH------------------VENPEEGAEIFAELVAHARTLIAERRTN--------PGNDIMSRVIMSKI-DG  214 (398)
T ss_dssp             HHHHHHHHH------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHCCB-TT
T ss_pred             HHHHHHHhc------------------CCCHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHHccc-CC
Confidence            222222111                  0112355677888899999999988773        34699999998765 33


Q ss_pred             CCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcChHHHH
Q 012536          242 ESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLHA  321 (461)
Q Consensus       242 ~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a  321 (461)
                      ..+++++++.++..+++||+|||+.+++|++++|++||++|+++++|++                           |++|
T Consensus       215 ~~l~~~~i~~~~~~l~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------------------~l~a  267 (398)
T 4fb2_A          215 ESLSEDDLIGFFTILLLGGIDNTARFLSSVFWRLAWDIELRRRLIAHPE---------------------------LIPN  267 (398)
T ss_dssp             BCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------------------GHHH
T ss_pred             CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------------------HHHH
Confidence            4699999999999999999999999999999999999999999998843                           5789


Q ss_pred             HHHHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCccccc
Q 012536          322 ALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAF  401 (461)
Q Consensus       322 ~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~~F  401 (461)
                      ||+|++|++|+++ ..|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+||||.          ..++||
T Consensus       268 ~i~E~lRl~p~~~-~~R~~~~d~~l-~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~~----------~~~~~F  334 (398)
T 4fb2_A          268 AVDELLRFYGPAM-VGRLVTQEVTV-GDITMKPGQTAMLWFPIASRDRSAF-DSPDNIVIERTP----------NRHLSL  334 (398)
T ss_dssp             HHHHHHHHHCCBC-EEEEECSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCCS----------CCCCTT
T ss_pred             HHHHHHHhCCCcC-CCeeeCCCEEE-CCEEECCCCEEEechHhhcCChhhC-CCcCeeCCCCCC----------CCCCCC
Confidence            9999999999999 88888888777 9999999999999999999999999 999999999982          357999


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHhccce-EEEeecCCCccceeeeEEEeeCCceeeEEeeC
Q 012536          402 QAGPRICPGKEFAYRQMKILAAVLLQFF-RFKLVDETKEATYRTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       402 g~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  461 (461)
                      |+|+|.|+|++||.+|++++++.|+++| +|+++++. ++.........+ ..++|+++||
T Consensus       335 G~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~-~~lpv~~~~~  393 (398)
T 4fb2_A          335 GHGIHRCLGAHLIRVEARVAITEFLKRIPEFSLDPNK-ECEWLMGQVAGM-LHVPIIFPKG  393 (398)
T ss_dssp             CCSTTCCTTHHHHHHHHHHHHHHHHHHCCSCEECTTS-CCEEECSSBCEE-EECEEECCCC
T ss_pred             CCCCcCCCCHHHHHHHHHHHHHHHHHhCCCcEECCCC-Cceecccccccc-ceeEEEEcCC
Confidence            9999999999999999999999999999 99998754 333333222223 3577777764


No 41 
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=100.00  E-value=9.5e-61  Score=449.80  Aligned_cols=374  Identities=14%  Similarity=0.124  Sum_probs=296.4

Q ss_pred             hhhhhHHHHHHHHhcCc-E-----EEecCCCCeEEecChhhHHhhhhcCccccCCChhhH---H--Hh-HhhccCceeee
Q 012536            8 FSRLFDYQTSLAKKYRT-F-----RLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNW---N--LM-RDLFGDGIFAV   75 (461)
Q Consensus         8 ~~~~~~~~~~~~~~yg~-~-----~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~---~--~~-~~~~g~~l~~~   75 (461)
                      ..+|+.++.+++ +||+ |     .+..  .++++|+||+.+++++.++ ..|++++...   .  .+ ....+.++++.
T Consensus        24 ~~~p~~~~~~l~-~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~   99 (414)
T 2uuq_A           24 WPNPWPMYRALR-DHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELEMIGLHDTPPMVMQ   99 (414)
T ss_dssp             TTCCHHHHHHHH-HHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHHHHTCSSSCCGGGC
T ss_pred             ccCchHHHHHHH-hcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCcccccccccccccccC
Confidence            368999999995 6886 4     3444  6799999999999999987 6788765321   0  11 11336788889


Q ss_pred             CChhHHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHH-HhHHHHHHhHhhhhhccCCCCCCCCC
Q 012536           76 DGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQ-DVLLKSSLDSIFKVGFGVELNSLSGS  154 (461)
Q Consensus        76 ~~~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~-~~~~~~~~~~i~~~~fG~~~~~~~~~  154 (461)
                      +++.|+++|++++++|++++++.+.+ .+++.++.+++.+...    +.+|+. +++..+++++++. +||.+.+.    
T Consensus       100 ~g~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~ll~~l~~~----~~vdl~~~~~~~~~~~vi~~-~~G~~~~~----  169 (414)
T 2uuq_A          100 DPPVHTEFRKLVSRGFTPRQVETVEP-TVRKFVVERLEKLRAN----GGGDIVTELFKPLPSMVVAH-YLGVPEED----  169 (414)
T ss_dssp             CTTHHHHHHHHHHTTSSHHHHHHHHH-HHHHHHHHHHHHHHHT----TEEEHHHHTTTHHHHHHHHH-HTTCCGGG----
T ss_pred             CchhHHHHHHHhhhhcCHHHHHHHHH-HHHHHHHHHHHHHHhc----CCccHHHHHHHHhHHHHHHH-HhCCCHHH----
Confidence            99999999999999999999999986 7788999999988652    369997 6678999999999 68987642    


Q ss_pred             CCccchHHHHhhhhhhHHHhhhhhHHHHHHHhh-chhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHH
Q 012536          155 DDFGNQFTKAFDDSNFIVYCRYVDVFWELKRYL-NIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRF  233 (461)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~l  233 (461)
                      .   ..+.+........       .      ++ +..  +...++...+.+++.+.++++++.        ...|+++.|
T Consensus       170 ~---~~~~~~~~~~~~~-------~------~~~p~~--~~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~~l  223 (414)
T 2uuq_A          170 W---TQFDGWTQAIVAA-------N------AVDGAT--TGALDAVGSMMAYFTGLIERRRTE--------PADDAISHL  223 (414)
T ss_dssp             H---HHHHHHHHHHHHH-------H------HC-------CCHHHHHHHHHHHHHHHHHHTTS--------CCSSHHHHH
T ss_pred             H---HHHHHHHHHHHhh-------c------ccCCch--hHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHH
Confidence            1   2233222221110       0      01 110  123456677888888888887653        346899999


Q ss_pred             hhccCC-CCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHH
Q 012536          234 LLESEK-DPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAA  312 (461)
Q Consensus       234 l~~~~~-~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~  312 (461)
                      +.+... ++..++++++.+++..+++||+|||+.+++|++++|++||++|+++++|+                       
T Consensus       224 l~~~~~~~~~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~-----------------------  280 (414)
T 2uuq_A          224 VAAGVGADGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDP-----------------------  280 (414)
T ss_dssp             HHTTTTCTTCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG-----------------------
T ss_pred             HhcccccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHhCH-----------------------
Confidence            987532 33458999999999999999999999999999999999999999999873                       


Q ss_pred             hhcChHHHHHHHHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCC
Q 012536          313 LEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRS  392 (461)
Q Consensus       313 l~~lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~  392 (461)
                          +||+|||+|++|++|+++..+|.+.+|.++ +||.||||+.|.++.+++||||++||+||++|+||||.       
T Consensus       281 ----~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeR~~-------  348 (414)
T 2uuq_A          281 ----EGIPDAVEELLRLTSPVQGLARTTTRDVTI-GDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRCP-------  348 (414)
T ss_dssp             ----GGHHHHHHHHHHHHCSBCCEEEEESSCEEE-TTEEECTTCEEEECHHHHTTCHHHHCTTTTSCCTTCCC-------
T ss_pred             ----HHHHHHHHHHHHhCCCcCCcceEECCCEEE-CCEEECCCCEEEeChhhhCCCHHHhCCCchhcCCCCCC-------
Confidence                379999999999999999778888888777 99999999999999999999999999999999999984       


Q ss_pred             CCCCcccccCCCCCCCCChHHHHHHHHHHHHHhccce-EEEeecCCCccceeeeEEEeeCCceeeEEeeC
Q 012536          393 ESPYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFF-RFKLVDETKEATYRTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       393 ~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  461 (461)
                         ..++|||+|+|.|+|++||++|++++++.|+++| +++++++  ++.+....++.+..+++|+++||
T Consensus       349 ---~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~--~~~~~~~~~~~~~~~lpv~~~~r  413 (414)
T 2uuq_A          349 ---RNILTFSHGAHHCLGAAAARMQCRVALTELLARCPDFEVAES--RIVWSGGSYVRRPLSVPFRVTSS  413 (414)
T ss_dssp             ---CSCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHHCCSEEECGG--GCEECCCSSBCCEEECEEEEC--
T ss_pred             ---CCCcCCCCCCccCCCHHHHHHHHHHHHHHHHHhCcccEECCC--CccccccccccCcceeEEEecCC
Confidence               2579999999999999999999999999999999 6999742  34444444556777899999886


No 42 
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=100.00  E-value=4.9e-60  Score=443.78  Aligned_cols=375  Identities=16%  Similarity=0.131  Sum_probs=297.8

Q ss_pred             hhhhhHHHHHHHHhcCcEEEecCCCCeEEecChhhHHhhhhcCccccCCChhhHHHhHhhccCceeeeCChhHHHHHhhh
Q 012536            8 FSRLFDYQTSLAKKYRTFRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWNLMRDLFGDGIFAVDGDKWRHQRKLA   87 (461)
Q Consensus         8 ~~~~~~~~~~~~~~yg~~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~g~~l~~~~~~~~~~~R~~~   87 (461)
                      ..+|+.++.++++ ||++.. +. .++++|+||+++++++.++ +.|++++...  .....+.++++.+++.|+++|+++
T Consensus        17 ~~~p~~~~~~l~~-~Gpv~~-~~-~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~--~~~~~~~~l~~~~g~~h~~~R~~~   90 (398)
T 2xkr_A           17 SREARAAYRWMRA-NQPVFR-DR-NGLAAASTYQAVIDAERQP-ELFSNAGGIR--PDQPALPMMIDMDDPAHLLRRKLV   90 (398)
T ss_dssp             CTTHHHHHHHHHH-HCSEEE-CT-TCCEEECSHHHHHHHHTCT-TTEESTTCSS--TTSCCCSSGGGCCTTHHHHHHHHH
T ss_pred             ccChhHHHHHHHh-cCCeee-cC-CCeEEEecHHHHHHHHhCc-ccccCccccC--CcccccccccccCchHHHHHHHHh
Confidence            4689999999998 876432 23 3799999999999999886 4788765322  222345678889999999999999


Q ss_pred             cccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHH-HhHHHHHHhHhhhhhccCCCCCCCCCCCccchHHHHhh
Q 012536           88 SYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQ-DVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKAFD  166 (461)
Q Consensus        88 ~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~-~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~  166 (461)
                      +++|++++++.+.+ .+++.++.+++.+..    ++.+|+. .+...+++++++.+ ||.+.+..       ..+.+...
T Consensus        91 ~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~----~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~-------~~~~~~~~  157 (398)
T 2xkr_A           91 NAGFTRKRVKDKEA-SIAALCDTLIDAVCE----RGECDFVRDLAAPLPMAVIGDM-LGVRPEQR-------DMFLRWSD  157 (398)
T ss_dssp             GGGSCHHHHHTTHH-HHHHHHHHHHHTTTT----TSEEEHHHHTTTHHHHHHHHHH-HTCCGGGH-------HHHHHHHH
T ss_pred             hhhhCHHHHHHHHH-HHHHHHHHHHHhhhh----cCCccHHHHHHHHHHHHHHHHH-hCCCHHHH-------HHHHHHHH
Confidence            99999999999986 678888888887753    2379999 55678999999998 99876321       23333322


Q ss_pred             hhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccCCCCCCCCH
Q 012536          167 DSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEKDPESMTD  246 (461)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~l~~  246 (461)
                      ......     .+.     +++ ...++..++...+.+++.+.++++++.        ...|+++.|+.+.. ++..+++
T Consensus       158 ~~~~~~-----~~~-----~~p-~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~~ll~~~~-~~~~ls~  217 (398)
T 2xkr_A          158 DLVTFL-----SSH-----VSQ-EDFQITMDAFAAYNDFTRATIAARRAD--------PTDDLVSVLVSSEV-DGERLSD  217 (398)
T ss_dssp             HHHHHH-----TSC-----CCH-HHHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHCCB-TTBCCCH
T ss_pred             HHHhcc-----Ccc-----cch-hhHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHHhhc-cCCCCCH
Confidence            222110     010     111 223456677788889999999888763        34689999998764 3456999


Q ss_pred             HHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcChHHHHHHHHh
Q 012536          247 KYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLHAALSET  326 (461)
Q Consensus       247 ~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~  326 (461)
                      +++.+++..+++||+|||+.+++|++++|++||++|+++++|++                           ||+|||+|+
T Consensus       218 ~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------------------~l~a~i~E~  270 (398)
T 2xkr_A          218 DELVMETLLILIGGDETTRHTLSGGTEQLLRNRDQWDLLQRDPS---------------------------LLPGAIEEM  270 (398)
T ss_dssp             HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHSHHHHHHHHHCGG---------------------------GHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHCHHHHHHHHhCHH---------------------------HHHHHHHHH
Confidence            99999999999999999999999999999999999999998842                           699999999


Q ss_pred             hcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCcccccCCCCC
Q 012536          327 LRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPR  406 (461)
Q Consensus       327 lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r  406 (461)
                      +|++|+++...|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+||||..          .++|||+|+|
T Consensus       271 lRl~p~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~~----------~~l~FG~G~r  338 (398)
T 2xkr_A          271 LRWTAPVKNMCRVLTADTEF-HGTALCAGEKMMLLFESANFDEAVF-CEPEKFDVQRNPN----------SHLAFGFGTH  338 (398)
T ss_dssp             HHHHCSBCEEEEEESSCEEE-TTEEECTTCEEEEEHHHHHTCTTTS-SSTTSCCTTCSSC----------CCCTTCCSTT
T ss_pred             HhhcccccCcceEECCCeeE-CCEEECCCCEEEeChhhhcCChhhC-CCCCeeCCCCCCC----------CCCcCCCCCc
Confidence            99999999878888888777 9999999999999999999999999 9999999999842          3799999999


Q ss_pred             CCCChHHHHHHHHHHHHHhccce-EEEeecCCCccc-eeeeEEEeeCCceeeEEeeC
Q 012536          407 ICPGKEFAYRQMKILAAVLLQFF-RFKLVDETKEAT-YRTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       407 ~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~r  461 (461)
                      .|+|++||++|++++++.|+++| +++++++ .++. +..........+++|+++||
T Consensus       339 ~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~~lpv~~~p~  394 (398)
T 2xkr_A          339 FCLGNQLARLELSLMTERVLRRLPDLRLVAD-DSVLPLRPANFVSGLESMPVVFTPS  394 (398)
T ss_dssp             CCTTHHHHHHHHHHHHHHHHHHSTTCEESCT-TCCCCBCCCSSBCCBSCCEEECCCC
T ss_pred             CCcCHHHHHHHHHHHHHHHHHhCCCceECCC-cceecccCcccccCccceeEEecCC
Confidence            99999999999999999999999 5999743 2331 12233344556788888765


No 43 
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=100.00  E-value=1.2e-60  Score=460.15  Aligned_cols=418  Identities=15%  Similarity=0.187  Sum_probs=288.8

Q ss_pred             cccccchhhhhHHHHHHHHhcCc-EEEecCCCCeEEecChhhHHhhhhcCccccCCChhhHHHhHhhccCceeeeCChhH
Q 012536            2 LNLLIHFSRLFDYQTSLAKKYRT-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWNLMRDLFGDGIFAVDGDKW   80 (461)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~yg~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~g~~l~~~~~~~~   80 (461)
                      ++++...++++.++.+++++||+ |.+.+++.++++|+||+++++++.++ +.++..+.....+...+|.+++..+++.|
T Consensus        31 G~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  109 (475)
T 3b98_A           31 GHALEFGKDAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDV-ASLDQTSYAQVLMKRIFNMILPSHNPESE  109 (475)
T ss_dssp             BTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCT-TTEESHHHHHHHHHHTTCCCCTTCCHHHH
T ss_pred             HhHHHHhhCHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCc-ccCCchHHHHHHHHHHhCCCCCCCChHHH
Confidence            34454557899999999999985 88889999999999999999999986 33555444444455566777777777665


Q ss_pred             HHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhc--ccCCceeHHHhHHHHHHhHhhhhhccCCCCCCCCCCCcc
Q 012536           81 RHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAA--AAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFG  158 (461)
Q Consensus        81 ~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~--~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~  158 (461)
                         |+++.++|+++.+..+.+ .+.+.+..+++.+....  .....+++..++..+++++++...||.+..     .  .
T Consensus       110 ---R~~~~~~f~~~~l~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-----~--~  178 (475)
T 3b98_A          110 ---KKRAEMHFQGASLTQLSN-SMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLFKTGYLTVFGAENN-----N--S  178 (475)
T ss_dssp             ---HHHHHHHTSHHHHHHHHH-HHHHHHHHHSSTTTTTCSSCSCEEEEHHHHHHHHHHHHHHHHHHCCTTS-----C--H
T ss_pred             ---HHHHHHHcChhhHHHHHH-HHHHHHHHHHhhcccccCCCCceeehHHHHHHHHHHHHhhhheeCCccc-----c--c
Confidence               566677899999998886 44555555555432211  122357888888888888888888884321     1  0


Q ss_pred             chHHHHhhhhhhHHHhhhhhHHHHHH-HhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhcc
Q 012536          159 NQFTKAFDDSNFIVYCRYVDVFWELK-RYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES  237 (461)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~  237 (461)
                      ..+.+....+..     ....++.+. .+++....+...+..+.+.+    .+.+....  ..   +...|+++.++...
T Consensus       179 ~~~~~~~~~~~~-----~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~--~~---~~~~d~l~~ll~~~  244 (475)
T 3b98_A          179 AALTQIYEEFRR-----FDKLLPKLARTTVNKEEKQIASAAREKLWK----WLTPSGLD--RK---PREQSWLGSYVKQL  244 (475)
T ss_dssp             HHHHHHHHHHHH-----HHHHHHHHHTTCCCHHHHHHHHHHHHHHHH----HHSCTTSC--CC---CCTTSHHHHHHHHH
T ss_pred             hhcHHHHHHHHH-----HHhhhHHHHHHhcChhhhHHHHHHHHHHHH----HHHHHHhh--cc---ccccHHHHHHHHHH
Confidence            112221211111     011111111 11211111222222222222    22111110  00   14568999998764


Q ss_pred             CCCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcCh
Q 012536          238 EKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMH  317 (461)
Q Consensus       238 ~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp  317 (461)
                      +++ +.++++++. ++..+++||+|||+.+++|++++|++||++|++|++|++  .+..          .++.+++.+||
T Consensus       245 ~~~-~~~~~~~i~-~~~~~l~ag~~TTa~~l~~~l~~L~~~P~~~~~l~~Ei~--~~~~----------~~~~~~~~~lp  310 (475)
T 3b98_A          245 QDE-GIDAEMQRR-AMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQ--GGKH----------LRLEERQKNTP  310 (475)
T ss_dssp             HHT-TCCHHHHHH-HHHHHHHHHHSSHHHHHHHHHHHHHTCHHHHHHHHHHHC------------------------CCH
T ss_pred             HHc-CCCHHHHHH-HHHHHHHHccccHHHHHHHHHHHHHcCHHHHHHHHHHHh--cCCC----------CCCHHHHhcCH
Confidence            332 347888888 899999999999999999999999999999999999998  2211          14889999999


Q ss_pred             HHHHHHHHhhcCCCCCCCCCcccccccccc----CCeeecCCCEEEEehhh-hccCccCccCCCCCcccCCcCCCC-ccC
Q 012536          318 YLHAALSETLRLYPAVPVDGKNAAEDDILP----DGFKVKKGDGVNYMTYA-MGRMTYIWGEDAEEFRPERWLVNG-VFR  391 (461)
Q Consensus       318 ~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~----~g~~ip~g~~v~~~~~~-~~~d~~~~g~~p~~F~P~R~~~~~-~~~  391 (461)
                      ||+|||+|++|++|+ +...|.+.+|+++.    +||.||||+.|.++.++ +||||++| +||++|+||||++++ ...
T Consensus       311 yl~a~i~E~lRl~p~-~~~~R~~~~d~~l~~~~g~g~~Ip~Gt~V~~~~~~~~~rdp~~~-~dP~~F~PeRfl~~~~~~~  388 (475)
T 3b98_A          311 VFDSVLWETLRLTAA-ALITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIH-QQPEMFQFDRFLNADRTEK  388 (475)
T ss_dssp             HHHHHHHHHHHHHEE-ECEEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTS-SSTTSCCTTTTBCTTSCBC
T ss_pred             HHHHHHHHHHhcCCc-cceeEEecCCeEeecCCCCeEEECCCCEEEeCcHHHhcCChhhc-CCcccCCcchhcCCCCCcc
Confidence            999999999999986 67788888887663    78999999999999999 99999999 999999999999622 110


Q ss_pred             -------CCCCCcccccCCCCCCCCChHHHHHHHHHHHHHhccceEEEeecCCC-ccc--e--eeeEEEeeCCceeeEEe
Q 012536          392 -------SESPYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDETK-EAT--Y--RTMFTLHVDKGLHLYAY  459 (461)
Q Consensus       392 -------~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~-~~~--~--~~~~~~~~~~~~~~~~~  459 (461)
                             ......++|||+|+|.|+|++||++|++++++.|+++|+|+++++.. .+.  .  ....+..|..+++++++
T Consensus       389 ~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  468 (475)
T 3b98_A          389 KDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKNATVPLVDPSRYGFGILQPAGDLEIRYR  468 (475)
T ss_dssp             CCCBSSSCBCSCSCCTTCSTTSCCTTHHHHHHHHHHHHHHHHHHEEEEESSTTCCCCCBCGGGTBEEECCBSSCCEEEEE
T ss_pred             ccccccccccccCccCcCCCCCCCCCHHHHHHHHHHHHHHHHHhEEEEECCCCCCCCCCCcccccccccCCCCCceEEEE
Confidence                   11246799999999999999999999999999999999999976532 222  1  12345567779999999


Q ss_pred             eC
Q 012536          460 PR  461 (461)
Q Consensus       460 ~r  461 (461)
                      +|
T Consensus       469 ~R  470 (475)
T 3b98_A          469 IR  470 (475)
T ss_dssp             EC
T ss_pred             ec
Confidence            87


No 44 
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=100.00  E-value=3e-60  Score=445.88  Aligned_cols=371  Identities=17%  Similarity=0.196  Sum_probs=298.6

Q ss_pred             hhhhhHHHHHHHHhcCc-EEEecCCCCeEEecChhhHHhhhhcCccccCCChhh--H----H-----Hh-Hh---hccCc
Q 012536            8 FSRLFDYQTSLAKKYRT-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYN--W----N-----LM-RD---LFGDG   71 (461)
Q Consensus         8 ~~~~~~~~~~~~~~yg~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~--~----~-----~~-~~---~~g~~   71 (461)
                      ..+|+.++.++ ++||+ |++.+++.++++++||+.+++++.++  .|++++..  .    .     .+ ..   ..+.+
T Consensus        13 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (404)
T 1z8o_A           13 HVDWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFATN   89 (404)
T ss_dssp             TSSHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSSS
T ss_pred             ccCcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhcccc
Confidence            46899999999 88975 77778889999999999999999986  57765432  1    0     11 22   24678


Q ss_pred             eeeeCChhHHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhH-HHHHHhHhhhhhccCCCCC
Q 012536           72 IFAVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVL-LKSSLDSIFKVGFGVELNS  150 (461)
Q Consensus        72 l~~~~~~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~  150 (461)
                      +++.+++.|+++|++++++|+++.++.+.+ .+++.++.+++.+.    .++++|+...+ ..+++++++. +||.+.+.
T Consensus        90 l~~~~g~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~----~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~  163 (404)
T 1z8o_A           90 MGTSDPPTHTRLRKLVSQEFTVRRVEAMRP-RVEQITAELLDEVG----DSGVVDIVDRFAHPLPIKVICE-LLGVDEKY  163 (404)
T ss_dssp             GGGCCTTHHHHHHHHHHTTSCHHHHHHTHH-HHHHHHHHHHHTSC----SSSEEEHHHHTTTHHHHHHHHH-HTTCCGGG
T ss_pred             cccCCCcHHHHHHHHHHHhhCHHHHHHHHH-HHHHHHHHHHHhhh----hcCCcchHHHHhHHHHHHHHHH-HhCCCHHH
Confidence            888999999999999999999999999986 67788888888764    25589999655 6899999998 49986542


Q ss_pred             CCCCCCccchHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHH
Q 012536          151 LSGSDDFGNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDIL  230 (461)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  230 (461)
                      .       ..+.+.+.....     . .+          +..+...++...+.+++.+.++++++.        ...|++
T Consensus       164 ~-------~~~~~~~~~~~~-----~-~~----------p~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll  212 (404)
T 1z8o_A          164 R-------GEFGRWSSEILV-----M-DP----------ERAEQRGQAAREVVNFILDLVERRRTE--------PGDDLL  212 (404)
T ss_dssp             T-------TTHHHHHHHHHC-----C-CG----------GGHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHH
T ss_pred             H-------HHHHHHHHHHhc-----c-CC----------hhHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHH
Confidence            1       233333222211     0 00          113456677788888999999888763        346899


Q ss_pred             HHHhhc-cCCCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhccc
Q 012536          231 SRFLLE-SEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVT  309 (461)
Q Consensus       231 ~~ll~~-~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~  309 (461)
                      +.|+.+ .+ ++..++++++.+++..+++||+|||+.+++|++++|++||++|+++++|+                    
T Consensus       213 ~~ll~~~~~-~~~~l~~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~--------------------  271 (404)
T 1z8o_A          213 SALIRVQDD-DDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDP--------------------  271 (404)
T ss_dssp             HHHHHCEET-TTEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG--------------------
T ss_pred             HHHHhhhcc-cCCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHCHHHHHHHHhCH--------------------
Confidence            999987 43 34469999999999999999999999999999999999999999999872                    


Q ss_pred             HHHhhcChHHHHHHHHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCc
Q 012536          310 EAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGV  389 (461)
Q Consensus       310 ~~~l~~lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~  389 (461)
                             .||+|||+|++|++|+++..+|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+||||.    
T Consensus       272 -------~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l-~g~~Ip~Gt~V~~~~~~~~rd~~~~-~dP~~F~PeR~~----  338 (404)
T 1z8o_A          272 -------SALPNAVEEILRYIAPPETTTRFAAEEVEI-GGVAIPQYSTVLVANGAANRDPKQF-PDPHRFDVTRDT----  338 (404)
T ss_dssp             -------GGHHHHHHHHHHHTCSSCCEEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTSCC----
T ss_pred             -------HhHHHHHHHHHHhcCCccCcceEECCCEEE-CCEEECCCCEEEecchhhcCCcccC-CChhhcCCCCCC----
Confidence                   269999999999999999778888888777 9999999999999999999999999 999999999983    


Q ss_pred             cCCCCCCcccccCCCCCCCCChHHHHHHHHHHHHHhccce-EEEeecCCCccceeeeEEEeeCCceeeEE
Q 012536          390 FRSESPYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFF-RFKLVDETKEATYRTMFTLHVDKGLHLYA  458 (461)
Q Consensus       390 ~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  458 (461)
                            ..++|||+|+|.|+|++||++|++++++.|+++| +++++++..++.+..+..+.+..+++|++
T Consensus       339 ------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~l~v~~  402 (404)
T 1z8o_A          339 ------RGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVWRRSLLLRGIDHLPVRL  402 (404)
T ss_dssp             ------TTCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCCCCCSSSCCCSCCEEET
T ss_pred             ------CCccCCCCCCccCCcHHHHHHHHHHHHHHHHHhCCCcEecCCCCcceeccccccCCcceeEEEe
Confidence                  2579999999999999999999999999999999 49997643344444444455666777765


No 45 
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=100.00  E-value=5.9e-60  Score=444.50  Aligned_cols=371  Identities=18%  Similarity=0.243  Sum_probs=296.5

Q ss_pred             hhhhhHHHHHHHHhcCc-EEEec-CCCCeEEecChhhHHhhhhcCccccCCChhh-HH--HhHh-hccCceeeeCChhHH
Q 012536            8 FSRLFDYQTSLAKKYRT-FRLLQ-PSCSEIFTTDPVNIEHILKTNFSNYGKGDYN-WN--LMRD-LFGDGIFAVDGDKWR   81 (461)
Q Consensus         8 ~~~~~~~~~~~~~~yg~-~~~~~-~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~-~~--~~~~-~~g~~l~~~~~~~~~   81 (461)
                      ..+++.++.++ ++||+ |++.+ +++++++|+||+++++|+.++  .|.+++.. ..  .+.. ..+.++++.+++.|+
T Consensus        36 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~  112 (417)
T 2y5n_A           36 GLTLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEMVKGGLLSMDPPEHS  112 (417)
T ss_dssp             SCCCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSCCCCSGGGCCTTHHH
T ss_pred             ccCchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCC--CcccCccccccccccCcccccccCccCCchHHH
Confidence            46899999999 88975 77776 689999999999999999985  47765543 10  1112 135678889999999


Q ss_pred             HHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhH-HHHHHhHhhhhhccCCCCCCCCCCCccch
Q 012536           82 HQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVL-LKSSLDSIFKVGFGVELNSLSGSDDFGNQ  160 (461)
Q Consensus        82 ~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~  160 (461)
                      ++|++++++|+++.++.+.+ .+++.++.+++.+..   ++.++|+...+ ..+++++++. +||.+.+.       ...
T Consensus       113 ~~R~~l~~~fs~~~l~~~~~-~i~~~~~~ll~~l~~---~~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~-------~~~  180 (417)
T 2y5n_A          113 RLRRLVVKAFTARRAESLRP-RAREIAHELVDQMAA---TGQPADLVAMFARQLPVRVICE-LLGVPSAD-------HDR  180 (417)
T ss_dssp             HHHHHHHHHSCHHHHHHTHH-HHHHHHHHHHHHHHH---HCSSEEHHHHTTTTHHHHHHHH-HHTCCGGG-------HHH
T ss_pred             HHHHHHhhhcCHHHHHHHHH-HHHHHHHHHHHHHHh---CCCCeeHHHHHHHHhHHHHHHH-HcCCCHHH-------HHH
Confidence            99999999999999999986 778889999998863   22279999766 5699999998 68976531       122


Q ss_pred             HHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccCCC
Q 012536          161 FTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEKD  240 (461)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~  240 (461)
                      +.+.+......               .. ...++..++...+.+++.+.++++++.        ..+|+++.|+.+.+ +
T Consensus       181 ~~~~~~~~~~~---------------~~-~~~~~~~~~~~~l~~~~~~~i~~r~~~--------~~~dll~~ll~~~~-~  235 (417)
T 2y5n_A          181 FTRWSGAFLST---------------AE-VTAEEMQEAAEQAYAYMGDLIDRRRKE--------PTDDLVSALVQARD-Q  235 (417)
T ss_dssp             HHHHHHTTSTT---------------CC-CCHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHCCB-T
T ss_pred             HHHHHHHHhcc---------------cC-CCHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHhhhc-c
Confidence            33322221110               00 112355677788888999999888764        33689999998754 3


Q ss_pred             CCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcChHHH
Q 012536          241 PESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLH  320 (461)
Q Consensus       241 ~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~  320 (461)
                      +..++++++.+++..+++||+|||+.+++|++++|++||++|+|+++|+                           .||+
T Consensus       236 ~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~---------------------------~~l~  288 (417)
T 2y5n_A          236 QDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRP---------------------------ELIP  288 (417)
T ss_dssp             TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG---------------------------GGHH
T ss_pred             CCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCH---------------------------HHHH
Confidence            3469999999999999999999999999999999999999999999872                           2699


Q ss_pred             HHHHHhhcCCCCCC--CCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCcc
Q 012536          321 AALSETLRLYPAVP--VDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKF  398 (461)
Q Consensus       321 a~i~E~lRl~~~~~--~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~  398 (461)
                      |||+|++|++|+++  ..+|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+||||.          ..+
T Consensus       289 a~i~E~lRl~p~~~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~----------~~~  356 (417)
T 2y5n_A          289 SAVEELTRWVPLGVGTAFPRYAVEDVTL-RGVTIRAGEPVLASTGAANRDQAQF-PDADRIDVDRTP----------NQH  356 (417)
T ss_dssp             HHHHHHHHHCCCBSSCCSCEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-TTTTSCCTTCSS----------CCC
T ss_pred             HHHHHHHHhcCCccccccceEeCCCEEE-CCEEECCCCEEEeChhhhCCCcccC-CCccccCCCCCC----------CCc
Confidence            99999999999999  678888888777 9999999999999999999999999 999999999983          257


Q ss_pred             cccCCCCCCCCChHHHHHHHHHHHHHhccce-EEEeecCCCccceeeeEEEeeCCceeeE
Q 012536          399 AAFQAGPRICPGKEFAYRQMKILAAVLLQFF-RFKLVDETKEATYRTMFTLHVDKGLHLY  457 (461)
Q Consensus       399 ~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  457 (461)
                      +|||+|+|.|+|++||++|++++++.|+++| +++++++..++.+...........++|+
T Consensus       357 lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~  416 (417)
T 2y5n_A          357 LGFGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIPETQLRWSEGMLLRGPLELPVV  416 (417)
T ss_dssp             CTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCCSSBCCBSCCEEE
T ss_pred             CCCCCCCcCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCCCccceeccCcccCCcceeEEe
Confidence            9999999999999999999999999999999 5999764334444444444455566665


No 46 
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=100.00  E-value=3.2e-60  Score=447.76  Aligned_cols=377  Identities=14%  Similarity=0.129  Sum_probs=290.7

Q ss_pred             hhhhhHHHHHHHHhcCc-EEEecC--CCCeEEecChhhHHhhhhcCccccCCChh--------hHHH-------hHhhcc
Q 012536            8 FSRLFDYQTSLAKKYRT-FRLLQP--SCSEIFTTDPVNIEHILKTNFSNYGKGDY--------NWNL-------MRDLFG   69 (461)
Q Consensus         8 ~~~~~~~~~~~~~~yg~-~~~~~~--~~~~v~v~dp~~~~~il~~~~~~f~~~~~--------~~~~-------~~~~~g   69 (461)
                      ..+++.++.++++ ||+ |++.+|  +.++++|+||+.+++|+.++  .|++++.        ....       +..+.|
T Consensus        19 ~~~p~~~~~~l~~-~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (425)
T 2z3t_A           19 IADPYPVYRRYRE-AAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVVE   95 (425)
T ss_dssp             HHCCHHHHHHHHH-HCSEEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHHT
T ss_pred             hcChHHHHHHHHh-cCCeEeccccCCCCCeEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccccccccc
Confidence            4689999999975 875 777776  78899999999999999875  6777642        1111       223334


Q ss_pred             CceeeeCChhHHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHh-HHHHHHhHhhhhhccCCC
Q 012536           70 DGIFAVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDV-LLKSSLDSIFKVGFGVEL  148 (461)
Q Consensus        70 ~~l~~~~~~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~-~~~~~~~~i~~~~fG~~~  148 (461)
                      .++++.+++.|+++|++++++|++++++.+.+ .+++.++.+++.+..   . +++|+... ...+++++++.+ ||.+.
T Consensus        96 ~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~ll~~l~~---~-g~~dl~~~~~~~~~~~vi~~~-~G~~~  169 (425)
T 2z3t_A           96 NWLVFLDPPHHTELRSLLTTEFSPSIVTGLRP-RIAELASALLDRLRA---Q-RRPDLVEGFAAPLPILVISAL-LGIPE  169 (425)
T ss_dssp             TCGGGCCHHHHHHHHHHHHGGGSHHHHHHHHH-HHHHHHHHHHHHHTT---S-SSCBHHHHTTTHHHHHHHHHH-HTCCG
T ss_pred             cccccCCchHHHHHHHHHHHhhCHHHHHHHHH-HHHHHHHHHHHHHHh---c-CCccHHHHHHHHHHHHHHHHH-hCCCH
Confidence            78888999999999999999999999999986 778889999988854   2 37999874 578999999998 99876


Q ss_pred             CCCCCCCCccchHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhh
Q 012536          149 NSLSGSDDFGNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKED  228 (461)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  228 (461)
                      +..       ..+.+........     ...+ +    ++....++..++...+.+++.+.++++++.        ...|
T Consensus       170 ~~~-------~~~~~~~~~~~~~-----~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d  224 (425)
T 2z3t_A          170 EDH-------TWLRANAVALQEA-----STTR-A----RDGRGYARAEAASQEFTRYFRREVDRRGGD--------DRDD  224 (425)
T ss_dssp             GGH-------HHHHHHHHHHHTT-----CTTC-C----C---HHHHHHHHHHHHHHHHHHHHCC---------------C
T ss_pred             HHH-------HHHHHHHHHHHhh-----cccc-C----CCHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCC
Confidence            421       2232222221110     0000 0    111223455677778888888888877653        2468


Q ss_pred             HHHHHhhccCCCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcc
Q 012536          229 ILSRFLLESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLV  308 (461)
Q Consensus       229 ~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~  308 (461)
                      +++.|+.+..+ +..++++++.+++..+++||+|||+.+++|++++|++||++|+|+++|+                   
T Consensus       225 ll~~ll~~~~~-~~~ls~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~-------------------  284 (425)
T 2z3t_A          225 LLTLLVRARDT-GSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTP-------------------  284 (425)
T ss_dssp             HHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHCHHHHHHHHHCG-------------------
T ss_pred             HHHHHHHhhcc-CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCh-------------------
Confidence            99999987543 4569999999999999999999999999999999999999999999873                   


Q ss_pred             cHHHhhcChHHHHHHHHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCC
Q 012536          309 TEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNG  388 (461)
Q Consensus       309 ~~~~l~~lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~  388 (461)
                              .||+|||+|++|++|+++..+|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+||||.   
T Consensus       285 --------~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~---  351 (425)
T 2z3t_A          285 --------ESTPAAVEELMRYDPPVQAVTRWAYEDIRL-GDHDIPRGSRVVALLGSANRDPARF-PDPDVLDVHRAA---  351 (425)
T ss_dssp             --------GGHHHHHHHHHHHSCSBCEEEEEESSCEEE-TTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTSCS---
T ss_pred             --------HhHHHHHHHHHHhCCcccCcceEeCCCeeE-CCEEECCCCEEEeChhhhCCCcccc-CCcccCCCCCCC---
Confidence                    279999999999999999778888888777 9999999999999999999999999 999999999995   


Q ss_pred             ccCCCCCCcccccCCCCCCCCChHHHHHHHHHHHHHhccce-EEEeecCCCccceeeeEEEeeCCceeeEEee
Q 012536          389 VFRSESPYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFF-RFKLVDETKEATYRTMFTLHVDKGLHLYAYP  460 (461)
Q Consensus       389 ~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  460 (461)
                             ..++|||+|+|.|+|++||++|++++++.|+++| +|+ +++... .+.....+.+..+++|++++
T Consensus       352 -------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~-~~~~~~-~~~~~~~~~~~~~lpv~~~~  415 (425)
T 2z3t_A          352 -------ERQVGFGLGIHYCLGATLARAEAEIGLRALLDGIPALG-RGAHEV-EYADDMVFHGPTRLLLDLPD  415 (425)
T ss_dssp             -------SCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCGGGG-SSCEEE-EECSCSSBCCEEEEEECCC-
T ss_pred             -------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCcCc-cCCCcc-ccccccccCCcceeeEEecc
Confidence                   2579999999999999999999999999999999 899 653212 33333344555567777654


No 47 
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=100.00  E-value=1.5e-60  Score=451.91  Aligned_cols=386  Identities=16%  Similarity=0.207  Sum_probs=285.3

Q ss_pred             chhhhhHHHHHHHHhcCc-EEEecCCCCeEEecChhhHHhhhhcCccccCCChhhHHHhHhhccC-ceeeeCChhHHHHH
Q 012536            7 HFSRLFDYQTSLAKKYRT-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWNLMRDLFGD-GIFAVDGDKWRHQR   84 (461)
Q Consensus         7 ~~~~~~~~~~~~~~~yg~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~g~-~l~~~~~~~~~~~R   84 (461)
                      ...+|+.++.++ ++||+ |+...++  +++|++|+.+++||.++ +.|++++... ......|. ++++.+++.|+++|
T Consensus        51 ~~~~p~~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~-~~f~~~~~~~-~~~~~~~~~~l~~~dg~~h~~~R  125 (441)
T 3nc3_A           51 FQNNPYAYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHP-DIFTTKSLVE-RAEPVMRGPVLAQMHGKEHSAKR  125 (441)
T ss_dssp             HHHCGGGTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCT-TTEECCCTTS-CCCCSCC-------------CCH
T ss_pred             hhcChHHHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCc-cccccccccc-ccccccCCCccccCCcHHHHHHH
Confidence            356889999888 57876 5554544  89999999999999987 4587765433 22334444 58889999999999


Q ss_pred             hhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHh-HHHHHHhHhhhhhccCCCCCCCCCCCccchHHH
Q 012536           85 KLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDV-LLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTK  163 (461)
Q Consensus        85 ~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~-~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~  163 (461)
                      ++++++|+++.++.+.+ .+++.++.+++.+.    +++.+|+... ...+++++++. +||.+...       ...+.+
T Consensus       126 r~~~~~fs~~~l~~~~~-~i~~~~~~ll~~l~----~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~-------~~~~~~  192 (441)
T 3nc3_A          126 RIVVRSFIGDALDHLSP-LIKQNAENLLAPYL----ERGKSDLVNDFGKTFAVCVTMD-MLGLDKRD-------HEKISE  192 (441)
T ss_dssp             HHHHHHHHHTHHHHHHH-HHHHHHHHHHTTTT----TTTEEECCCCCHHHHHHHHHHH-HTTCCGGG-------HHHHHH
T ss_pred             HHHHhhcCHHHHHHHHH-HHHHHHHHHHHHHH----hcCCCcHHHHHHHHHHHHHHHH-HcCCCHHH-------HHHHHH
Confidence            99999999999999886 67788888887664    3457897554 45699999998 58876532       122333


Q ss_pred             HhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccCCCCCC
Q 012536          164 AFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEKDPES  243 (461)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~  243 (461)
                      .............          .+....+...++...+.+++.+.++++++.        ..+|+++.|+.+.. ++..
T Consensus       193 ~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~--------~~~Dll~~Ll~~~~-~~~~  253 (441)
T 3nc3_A          193 WHSGVADFITSIS----------QSPEARAHSLWCSEQLSQYLMPVIKERRVN--------PGSDLISILCTSEY-EGMA  253 (441)
T ss_dssp             HHHHHHHHHHCSC----------CCHHHHHHHHHHHHHHHHHHHHHHHHHTTS--------CCSSHHHHHCC-------C
T ss_pred             HHHHHHHhccccc----------CChHHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHHhhc-cCCC
Confidence            3322222111000          011123445677778888898888887653        44699999998764 3456


Q ss_pred             CCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcChHHHHHH
Q 012536          244 MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLHAAL  323 (461)
Q Consensus       244 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i  323 (461)
                      ++++++++++..+++||+|||+.+++|++++|++||++|+++++|+                           +||+|||
T Consensus       254 ls~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~---------------------------~~l~a~i  306 (441)
T 3nc3_A          254 LSDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLADR---------------------------SLVPRAI  306 (441)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCG---------------------------GGHHHHH
T ss_pred             CCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH---------------------------HHHHHHH
Confidence            9999999999999999999999999999999999999999998762                           5899999


Q ss_pred             HHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCcccccCC
Q 012536          324 SETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQA  403 (461)
Q Consensus       324 ~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~~Fg~  403 (461)
                      +|+||++|+++...|.+.+|.++ +|+.||+|+.|.++.+++||||++| +||++|+|+||+.+..........++|||+
T Consensus       307 ~E~LRl~pp~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~f-~dP~~F~PeR~~~~~~~~~~~~~~~l~FG~  384 (441)
T 3nc3_A          307 AETLRYKPPVQLIPRQLSQDTVV-GGMEIKKDTIVFCMIGAANRDPEAF-EQPDVFNIHREDLGIKSAFSGAARHLAFGS  384 (441)
T ss_dssp             HHHHHHSCSBCEEEEEESSCEES-SSCEECTTCEEEEEHHHHHTCTTTS-SSTTSCCTTCTTSCGGGTTSSSCSSCTTCC
T ss_pred             HHhhhcCCcccCccEEECCCEEE-CCEEECCCCEEEechHHhcCChhhC-CCcccCCCCCCCcccccccCCCCCcccCCC
Confidence            99999999999988888888777 9999999999999999999999999 999999999997633222222567899999


Q ss_pred             CCCCCCChHHHHHHHHHHHHHhccce-EEEeecCCCccceeeeEEEeeCCceeeEEee
Q 012536          404 GPRICPGKEFAYRQMKILAAVLLQFF-RFKLVDETKEATYRTMFTLHVDKGLHLYAYP  460 (461)
Q Consensus       404 G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  460 (461)
                      |+|.|+|++||++|++++++.|+++| +|++++++  +....+..+.....++|+++|
T Consensus       385 G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~--~~~~~~~~~~~~~~lpv~~~~  440 (441)
T 3nc3_A          385 GIHNCVGTAFAKNEIEIVANIVLDKMRNIRLEEDF--CYAESGLYTRGPVSLLVAFDG  440 (441)
T ss_dssp             GGGCCTTHHHHHHHHHHHHHHHHHHSTTCEECTTC--CCCEECSSBCEESCCEEECC-
T ss_pred             CCccCCCHHHHHHHHHHHHHHHHHhCcccEECCCC--cccccCccccCcceeEEEEec
Confidence            99999999999999999999999999 99998653  223333344455678887764


No 48 
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=100.00  E-value=1.8e-60  Score=447.97  Aligned_cols=374  Identities=15%  Similarity=0.146  Sum_probs=295.6

Q ss_pred             chhhhhHHHHHHHHhcCc-EEEec-CCCCeEEecChhhHHhhhhcCccccCCChh--hHHH---hHh---hccCceeeeC
Q 012536            7 HFSRLFDYQTSLAKKYRT-FRLLQ-PSCSEIFTTDPVNIEHILKTNFSNYGKGDY--NWNL---MRD---LFGDGIFAVD   76 (461)
Q Consensus         7 ~~~~~~~~~~~~~~~yg~-~~~~~-~~~~~v~v~dp~~~~~il~~~~~~f~~~~~--~~~~---~~~---~~g~~l~~~~   76 (461)
                      ..++++.++.+| ++||+ |++.+ ++.++|+|+||++++++|.++  .|++.+.  ....   +..   ..+.++++.+
T Consensus        22 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~   98 (408)
T 3abb_A           22 CPYQPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDP--RLSSDWGHPDFPVVVRRTEDRGGLAFPLIGVD   98 (408)
T ss_dssp             STTSCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCT--TEECCTTSTTCCCCC---------CCTTTTCC
T ss_pred             cccCchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCC--CcccccccccccccccCCccccccccccccCC
Confidence            457899999999 89985 77777 788999999999999999875  2444332  1110   111   1235788889


Q ss_pred             ChhHHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHH-HHHHhHhhhhhccCCCCCCCCCC
Q 012536           77 GDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLL-KSSLDSIFKVGFGVELNSLSGSD  155 (461)
Q Consensus        77 ~~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~-~~~~~~i~~~~fG~~~~~~~~~~  155 (461)
                      ++.|+++|++++++|++++++.+.+ .+++.++.+++.+..   .++++|+...+. .+++++++. +||.+.+.     
T Consensus        99 g~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~---~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-----  168 (408)
T 3abb_A           99 DPVHARQRRMLIPSFGVKRMNAIRP-RLQSLVDRLLDDMLA---KGPGADLVSAFALPVPSVAICE-LLGVPYGD-----  168 (408)
T ss_dssp             TTHHHHHHHHHGGGGCHHHHHHHHH-HHHHHHHHHHHHHHH---TCSCEEHHHHTTTHHHHHHHHH-HHTCCGGG-----
T ss_pred             chHHHHHHHHhhhhcCHHHHHHHHH-HHHHHHHHHHHHHHh---cCCCeehHHHHHHHHHHHHHHH-HhCCCHHH-----
Confidence            9999999999999999999999986 778899999998873   345899998876 499999997 79976531     


Q ss_pred             CccchHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhh
Q 012536          156 DFGNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLL  235 (461)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~  235 (461)
                        ...+...+......       .          .. +...++...+.+++.+.++++++.        ...|+++.|+.
T Consensus       169 --~~~~~~~~~~~~~~-------~----------~~-~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~ll~  220 (408)
T 3abb_A          169 --HDFFEECSRNFVGA-------A----------TS-AEADAAFGELYTYLHGLVGRKQAE--------PEDGLLDELIA  220 (408)
T ss_dssp             --HHHHHHHHHHHC------------------------CCSSHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHH
T ss_pred             --HHHHHHHHHHHhcc-------c----------ch-HHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHh
Confidence              12233222221110       0          00 223356677888888888887764        23689999998


Q ss_pred             ccCCCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhc
Q 012536          236 ESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEK  315 (461)
Q Consensus       236 ~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (461)
                      +.. ++..++++++.+++..+++||+|||+.+++|++++|++||++|+++++|+                          
T Consensus       221 ~~~-~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~--------------------------  273 (408)
T 3abb_A          221 RQL-EEGDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRDP--------------------------  273 (408)
T ss_dssp             HHH-TSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGGGGGGSCH--------------------------
T ss_pred             ccc-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCH--------------------------
Confidence            753 23469999999999999999999999999999999999999999998652                          


Q ss_pred             ChHHHHHHHHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCC
Q 012536          316 MHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESP  395 (461)
Q Consensus       316 lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~  395 (461)
                       .||+|||+|++|++|+++..+|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+||||          .
T Consensus       274 -~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~----------~  340 (408)
T 3abb_A          274 -GAVSGVVEELLRFTSVSDHIVRMAKEDIEV-GGATIKAGDAVLVSITLMNRDAKAY-ENPDIFDARRN----------A  340 (408)
T ss_dssp             -HHHHHHHHHHHHHHCSSCEEEEEESSCEEE-TTEEECTTCEEEEEHHHHHTCTTTS-SSTTSCCTTSC----------C
T ss_pred             -HhHHHHHHHHHHhcCcccccceEeCCCeEE-CCEEECCCCEEEeChHHhcCCcccC-CCcccCCCCCC----------C
Confidence             269999999999999999778888888777 9999999999999999999999999 99999999996          2


Q ss_pred             CcccccCCCCCCCCChHHHHHHHHHHHHHhccce-EEEeecCCCccceeeeEEEeeCCceeeEEeeC
Q 012536          396 YKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFF-RFKLVDETKEATYRTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       396 ~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  461 (461)
                      ..++|||+|+|.|+|++||++|++++++.|+++| +++++.+..++.........+...+++++++|
T Consensus       341 ~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~lpv~~~~~  407 (408)
T 3abb_A          341 RHHVGFGHGIHQCLGQNLARAELEIALGGLFARIPGLRLAVPLDEVPIKAGHDAQGPIELPVVWHHH  407 (408)
T ss_dssp             TTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGSCBCCTTSCCSBSCCEEECSCC
T ss_pred             CCCCCCCCCCcCCcCHHHHHHHHHHHHHHHHHhCccceecCCccccccccCcccCCcceeEEEeCCC
Confidence            3589999999999999999999999999999999 79997543344444444455667889988876


No 49 
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=100.00  E-value=1.1e-59  Score=443.98  Aligned_cols=377  Identities=17%  Similarity=0.200  Sum_probs=298.7

Q ss_pred             hhhhhHHHHHHHHhcCc-EEEecCCCCeEEecChhhHHhhhhcCccccCCChh-----hHHH--hHhh--c-cCceeeeC
Q 012536            8 FSRLFDYQTSLAKKYRT-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDY-----NWNL--MRDL--F-GDGIFAVD   76 (461)
Q Consensus         8 ~~~~~~~~~~~~~~yg~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~-----~~~~--~~~~--~-g~~l~~~~   76 (461)
                      .++++.++.++ ++||+ |. . ++.++++|+||+.+++||.++ + |++++.     +...  +..+  . +.++++.+
T Consensus        25 ~~~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~-~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~   99 (419)
T 1q5d_A           25 AEDPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDE-R-FAVSREEWESSAEYSSAIPELSDMKKYGLFGLP   99 (419)
T ss_dssp             TTCCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCT-T-EECCGGGSTTHHHHHHSSGGGHHHHHHSTTTSC
T ss_pred             hhChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCC-C-ccccccccccccccccccchhhhhcccccccCC
Confidence            46899999999 68985 55 4 778999999999999999987 4 888761     2111  1122  1 55688889


Q ss_pred             ChhHHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHH-hHHHHHHhHhhhhhccCCCCCCCCCC
Q 012536           77 GDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQD-VLLKSSLDSIFKVGFGVELNSLSGSD  155 (461)
Q Consensus        77 ~~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~-~~~~~~~~~i~~~~fG~~~~~~~~~~  155 (461)
                      ++.|+++|++++++|++++++.+.+ .+++.++.+++.+..    ++++|+.. +...+++++++.+ ||.+.+..    
T Consensus       100 g~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~ll~~l~~----~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~----  169 (419)
T 1q5d_A          100 PEDHARVRKLVNPSFTSRAIDLLRA-EIQRTVDQLLDARSG----QEEFDVVRDYAEGIPMRAISAL-LKVPAECD----  169 (419)
T ss_dssp             HHHHHHHHHHHGGGGSHHHHGGGHH-HHHHHHHHHHHHHTT----SSCEETTTTTGGGSHHHHHHHH-TTCCGGGH----
T ss_pred             chHHHHHHHHHHHhcCHHHHHHHHH-HHHHHHHHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHH-hCCCHHHH----
Confidence            9999999999999999999999986 778889999988753    23799986 4589999999998 99876421    


Q ss_pred             CccchHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChh-hHHHHHh
Q 012536          156 DFGNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKE-DILSRFL  234 (461)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~l~~ll  234 (461)
                         ..+.+.........    ...+++   +. ....++..++...+.+++.+.++++++.        ... |+++.|+
T Consensus       170 ---~~~~~~~~~~~~~~----~~~~~P---~~-~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~~dll~~ll  230 (419)
T 1q5d_A          170 ---EKFRRFGSATARAL----GVGLVP---RV-DEETKTLVASVTEGLALLHGVLDERRRN--------PLENDVLTMLL  230 (419)
T ss_dssp             ---HHHHHHHHHHHHHT----TTTTSS---CC-CSCHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSCHHHHHH
T ss_pred             ---HHHHHHHHHHHHhc----cccccc---CC-hHHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCCHHHHHH
Confidence               23333322222110    000000   00 1223456678888899999999888763        235 8999999


Q ss_pred             hccCCCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhh
Q 012536          235 LESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALE  314 (461)
Q Consensus       235 ~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~  314 (461)
                      .+.. ++..++++++.+++..+++||+|||+.+++|++++|++||++|+||++|+                         
T Consensus       231 ~~~~-~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~-------------------------  284 (419)
T 1q5d_A          231 QAEA-DGSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEP-------------------------  284 (419)
T ss_dssp             HHHH-SSTTCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG-------------------------
T ss_pred             hhhc-cCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH-------------------------
Confidence            8753 23469999999999999999999999999999999999999999999872                         


Q ss_pred             cChHHHHHHHHhhcCCCCCC-CCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCC
Q 012536          315 KMHYLHAALSETLRLYPAVP-VDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSE  393 (461)
Q Consensus       315 ~lp~l~a~i~E~lRl~~~~~-~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~  393 (461)
                        .||+|||+|++|++|+++ ...|.+.+|.++ +||.||+|+.|.++.+++||||++| +||++|+||||         
T Consensus       285 --~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~---------  351 (419)
T 1q5d_A          285 --GLMRNALDEVLRFDNILRIGTVRFARQDLEY-CGASIKKGEMVFLLIPSALRDGTVF-SRPDVFDVRRD---------  351 (419)
T ss_dssp             --GGHHHHHHHHHHHSCSBSSEEEEEESSCEEE-TTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTSC---------
T ss_pred             --HHHHHHHHHHHHhCCccccccceeeCCCeEE-CCEEECCCCEEEecHHHhcCChhhC-CChhhcCCCCC---------
Confidence              279999999999999999 668888888777 9999999999999999999999999 99999999995         


Q ss_pred             CCCcccccCCCCCCCCChHHHHHHHHHHHHHhccce-EEEeecCCCccceeeeEEEeeCCceeeEEeeC
Q 012536          394 SPYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFF-RFKLVDETKEATYRTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       394 ~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  461 (461)
                       ...++|||+|+|.|+|++||++|++++++.|+++| +++++++ .  .+.....+.+..+++|+++||
T Consensus       352 -~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~--~~~~~~~~~~~~~l~v~~~~r  416 (419)
T 1q5d_A          352 -TSASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRFPEMKLKET-P--VFGYHPAFRNIESLNVILKPS  416 (419)
T ss_dssp             -CTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSC-C--EECCCSSBCCEEECEEESSCC
T ss_pred             -CCCCCCCCCCCCcCccHHHHHHHHHHHHHHHHHhCCCeEECCC-c--ccccccccCCCceeEEEEecC
Confidence             13579999999999999999999999999999999 7999764 2  233334455666889998886


No 50 
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=100.00  E-value=3.3e-59  Score=437.21  Aligned_cols=364  Identities=17%  Similarity=0.192  Sum_probs=291.3

Q ss_pred             hhhhhHHHHHHHHhcCc-EEEec-CCCCeEEecChhhHHhhhhcCccccCCChhhHHHhHhh-ccCc--eeeeCC-----
Q 012536            8 FSRLFDYQTSLAKKYRT-FRLLQ-PSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWNLMRDL-FGDG--IFAVDG-----   77 (461)
Q Consensus         8 ~~~~~~~~~~~~~~yg~-~~~~~-~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~~~~~~-~g~~--l~~~~~-----   77 (461)
                      ..+|+.++.++ ++||+ |++.+ +++++++|+||+++++|+.++  .|.+++.....+... .+.+  +++.++     
T Consensus        25 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~  101 (404)
T 2xbk_A           25 MLKLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDE--RIGRTHPDPPSAAQYVRSPFLDLLISDADAESG  101 (404)
T ss_dssp             TTBCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCT--TEESBCSSGGGSCCSSCCHHHHTTCBCSCHHHH
T ss_pred             ccCccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCC--CCCCCccccccCCcccccccccceeeCCCCCCC
Confidence            46899999999 88975 77776 689999999999999999985  477655432112221 3455  888899     


Q ss_pred             -hhHHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhH-HHHHHhHhhhhhccCCCCCCCCCC
Q 012536           78 -DKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVL-LKSSLDSIFKVGFGVELNSLSGSD  155 (461)
Q Consensus        78 -~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~  155 (461)
                       +.|+++|++++++|++++++.+.+ .+++.++.+++.+..   .++++|+...+ ..+++++++. +||.+.+.     
T Consensus       102 ~~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~ll~~l~~---~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-----  171 (404)
T 2xbk_A          102 RRQHAETRRLLTPLFSARRVLEMQP-KVEEAADTLLDAFIA---QGPPGDLHGELTVPFALTVLCE-VIGVPPQR-----  171 (404)
T ss_dssp             HHHHHHHHHHHGGGGCHHHHHHHHH-HHHHHHHHHHHHHHH---TCSSEEHHHHTHHHHHHHHHHH-HHTCCGGG-----
T ss_pred             CchHHHHHHHhhhhcCHHHHHHHHH-HHHHHHHHHHHHHHh---cCCCeeHHHHHHHHHHHHHHHH-HhCCCHHH-----
Confidence             999999999999999999999986 778899999998863   34589999766 5799999997 79976531     


Q ss_pred             CccchHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhh
Q 012536          156 DFGNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLL  235 (461)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~  235 (461)
                        ...+.+.+......     ..           +.  +..++...+.+++.+.++++++.        ..+|+++.| +
T Consensus       172 --~~~~~~~~~~~~~~-----~~-----------~p--~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~~l-~  222 (404)
T 2xbk_A          172 --RAELTTLLAGIAKL-----DD-----------RE--GAVRAQDDLFGYVAGLVEHKRAE--------PGPDIISRL-N  222 (404)
T ss_dssp             --HHHHHHHHHHHTBS-----SC-----------HH--HHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHH-H
T ss_pred             --HHHHHHHHHHHHhc-----cC-----------cH--HHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHh-h
Confidence              02233322221110     00           01  44567778888899998887764        235888888 2


Q ss_pred             ccCCCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhc
Q 012536          236 ESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEK  315 (461)
Q Consensus       236 ~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (461)
                          ++ .++++++.+++..+++||+|||+.+++|++++|++||++|+|+++|++                         
T Consensus       223 ----~~-~ls~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~-------------------------  272 (404)
T 2xbk_A          223 ----DG-ELTEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPDQRAAALADPD-------------------------  272 (404)
T ss_dssp             ----SS-SCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHCHH-------------------------
T ss_pred             ----cC-CCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-------------------------
Confidence                22 699999999999999999999999999999999999999999998842                         


Q ss_pred             ChHHHHHHHHhhcCCCCCC--CCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCC
Q 012536          316 MHYLHAALSETLRLYPAVP--VDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSE  393 (461)
Q Consensus       316 lp~l~a~i~E~lRl~~~~~--~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~  393 (461)
                        ||+|||+|++|++|+++  ..+|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+||||.        
T Consensus       273 --~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~--------  340 (404)
T 2xbk_A          273 --VMARAVEEVLRTARAGGSVLPPRYASEDMEF-GGVTIRAGDLVLFDLGLPNFDERAF-TGPEEFDAARTP--------  340 (404)
T ss_dssp             --HHHHHHHHHHHHSCSSCCBCSCEEESSCEEE-TTEEECTTCEEECBTHHHHTCTTTS-SSTTSCCTTCSS--------
T ss_pred             --HHHHHHHHHHHhCCCccccccceeECCCeeE-CCEEECCCCEEEeChHHhcCChhhC-CCccccCCCCCC--------
Confidence              58999999999999999  778888888777 9999999999999999999999999 999999999983        


Q ss_pred             CCCcccccCCCCCCCCChHHHHHHHHHHHHHhccce-EEEeecCCCccceeeeEEEeeCCceeeE
Q 012536          394 SPYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFF-RFKLVDETKEATYRTMFTLHVDKGLHLY  457 (461)
Q Consensus       394 ~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  457 (461)
                        ..++|||+|+|.|+|++||++|++++++.|+++| ++++++++.++.+..+..+.....++|+
T Consensus       341 --~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~  403 (404)
T 2xbk_A          341 --NPHLTFGHGIWHCIGAPLARLELRTMFTKLFTRLPELRPELPVEQLRLKEGQLSGGFAELRVV  403 (404)
T ss_dssp             --CCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCSSBTTCCBSCCEEE
T ss_pred             --CCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCcceecCCCCcceeccCcccCCcceeeee
Confidence              3579999999999999999999999999999999 6999765334444444444455566654


No 51 
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=100.00  E-value=5.6e-59  Score=440.31  Aligned_cols=356  Identities=16%  Similarity=0.158  Sum_probs=290.4

Q ss_pred             hhhhHHHHHHHHhcCc-EEEecC-------CCCeEEecChhhHHhhhhcCccccCCChhh--HHHhHhh--ccCceeeeC
Q 012536            9 SRLFDYQTSLAKKYRT-FRLLQP-------SCSEIFTTDPVNIEHILKTNFSNYGKGDYN--WNLMRDL--FGDGIFAVD   76 (461)
Q Consensus         9 ~~~~~~~~~~~~~yg~-~~~~~~-------~~~~v~v~dp~~~~~il~~~~~~f~~~~~~--~~~~~~~--~g~~l~~~~   76 (461)
                      .+++.++.+|+ +||+ |.+..+       ++++++|+||+.+++||.++ +.|++++..  ...+..+  .+.++++.+
T Consensus        44 ~~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~l~~~d  121 (435)
T 2wm5_A           44 DVRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYFGSMIVLD  121 (435)
T ss_dssp             HHHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHHHGGGGCC
T ss_pred             CChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccccchhhhccccccCC
Confidence            68999999996 5875 777665       67899999999999999986 568876521  1011111  256788889


Q ss_pred             ChhHHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhH-HHHHHhHhhhhhccCCCCCCCCCC
Q 012536           77 GDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVL-LKSSLDSIFKVGFGVELNSLSGSD  155 (461)
Q Consensus        77 ~~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~  155 (461)
                      ++.|+++|++++++|++++++.+.+ .+++.++.+++.+... +++..+|+...+ ..+++++++.+ ||.+++..    
T Consensus       122 g~~h~~~R~~l~~~fs~~~l~~~~~-~i~~~~~~ll~~l~~~-~~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~~----  194 (435)
T 2wm5_A          122 DPRHQRLRSIVSRAFTPKVVARIEA-AVRDRAHRLVSSMIAN-NPDRQADLVSELAGPLPLQIICDM-MGIPKADH----  194 (435)
T ss_dssp             TTHHHHHHHHHHHTCCHHHHHHHHH-HHHHHHHHHHHHHHHH-CTTSEEEHHHHTTTHHHHHHHHHH-HTCCGGGH----
T ss_pred             cHHHHHHHHHhHHhhCHHHHHHHHH-HHHHHHHHHHHHHHhc-CCCCcEehHHHHHHHHHHHHHHHH-cCCCHHHH----
Confidence            9999999999999999999999986 7788999999988763 234589999765 78999999999 99876421    


Q ss_pred             CccchHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhh
Q 012536          156 DFGNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLL  235 (461)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~  235 (461)
                         ..+.+........     ..+.     +.  +.+++..++...+.+++.+.++++++.        ...|+++.|+.
T Consensus       195 ---~~~~~~~~~~~~~-----~~p~-----~~--~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~~ll~  251 (435)
T 2wm5_A          195 ---QRIFHWTNVILGF-----GDPD-----LA--TDFDEFMQVSADIGAYATALAEDRRVN--------HHDDLTSSLVE  251 (435)
T ss_dssp             ---HHHHHHHHHHHHT-----TCTT-----SC--CCHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHH
T ss_pred             ---HHHHHHHHHHhcc-----CCcc-----hh--hhHHHHHHHHHHHHHHHHHHHHHHhcC--------CCCCHHHHHHh
Confidence               2333332222110     1111     11  223456677888899999999888763        34689999998


Q ss_pred             ccCCCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhc
Q 012536          236 ESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEK  315 (461)
Q Consensus       236 ~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (461)
                      +.. ++..++++++.+++..+++||+|||+.+++|++++|++||++|+++++|++                         
T Consensus       252 ~~~-~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~-------------------------  305 (435)
T 2wm5_A          252 AEV-DGERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFD-------------------------  305 (435)
T ss_dssp             CCB-TTBCCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHSHH-------------------------
T ss_pred             hhc-cCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCHHHHHHHhChH-------------------------
Confidence            754 244699999999999999999999999999999999999999999999954                         


Q ss_pred             ChHHHHHHHHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCC
Q 012536          316 MHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESP  395 (461)
Q Consensus       316 lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~  395 (461)
                       +||+|||+|++|++|+++...|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+||||          +
T Consensus       306 -~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~f-~dP~~F~PeR~----------~  372 (435)
T 2wm5_A          306 -GLAPTAVEEIVRWASPVVYMRRTLTQDIEL-RGTKMAAGDKVSLWYCSANRDESKF-ADPWTFDLARN----------P  372 (435)
T ss_dssp             -HHHHHHHHHHHHHHCSBCCEEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTCCCTTCC----------S
T ss_pred             -hHHHHHHHHHHhhcCcccCcceEeCCCeeE-CCEEECCCCEEEeCHHHhcCCcccC-cCCCccCCCCC----------C
Confidence             279999999999999999778888888777 9999999999999999999999999 99999999994          1


Q ss_pred             CcccccCC-CCCCCCChHHHHHHHHHHHHHhccceE-EEeec
Q 012536          396 YKFAAFQA-GPRICPGKEFAYRQMKILAAVLLQFFR-FKLVD  435 (461)
Q Consensus       396 ~~~~~Fg~-G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~  435 (461)
                      ..++|||+ |+|.|+|++||++|++++++.|+++|+ +++++
T Consensus       373 ~~~lpFG~~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~  414 (435)
T 2wm5_A          373 NPHLGFGGGGAHFCLGANLARREIRVAFDELRRQMPDVVATE  414 (435)
T ss_dssp             CCCCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEECS
T ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCccEECC
Confidence            35899999 999999999999999999999999997 99975


No 52 
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=100.00  E-value=8.5e-59  Score=436.74  Aligned_cols=357  Identities=14%  Similarity=0.149  Sum_probs=285.3

Q ss_pred             hhhhhHHHHHHHHhcCc-EEEecC-CCCeEEecChhhHHhhhhcCc-cccCCChhhH---HH-hHhhcc-CceeeeCChh
Q 012536            8 FSRLFDYQTSLAKKYRT-FRLLQP-SCSEIFTTDPVNIEHILKTNF-SNYGKGDYNW---NL-MRDLFG-DGIFAVDGDK   79 (461)
Q Consensus         8 ~~~~~~~~~~~~~~yg~-~~~~~~-~~~~v~v~dp~~~~~il~~~~-~~f~~~~~~~---~~-~~~~~g-~~l~~~~~~~   79 (461)
                      ..+|+.++.+|+ +||+ |.+.++ |.+.++|++++.+++++.++. ..+..++...   .. .....+ .++++.+++.
T Consensus        16 ~~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~l~~~~g~~   94 (404)
T 1jfb_A           16 GPEPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELSASGKQAAKAKPTFVDMDPPE   94 (404)
T ss_dssp             TTSCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCSHHHHHHTTSCCCGGGCCTTH
T ss_pred             CCCccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCccccccccchhcccCcccccCchh
Confidence            458999999996 5875 666654 677788999999999998762 1222222111   00 111222 4688889999


Q ss_pred             HHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHHHHHHhHhhhhhccCCCCCCCCCCCccc
Q 012536           80 WRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGN  159 (461)
Q Consensus        80 ~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~  159 (461)
                      |+++|++++++|++++++.+.+ .+++.++.+++.+.+....++++|+...+...+.++++..+||.+++.        .
T Consensus        95 h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~~~~~i~~~~~G~~~~~--------~  165 (404)
T 1jfb_A           95 HMHQRSMVEPTFTPEAVKNLQP-YIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYIIYTLLGVPFND--------L  165 (404)
T ss_dssp             HHHHHTTTGGGGSHHHHHHHHH-HHHHHHHHHHHHHHHHCSTTSCEEHHHHTTTHHHHHHHHHHHTCCGGG--------H
T ss_pred             HHHHHHHhhhhcCHHHHHHHHH-HHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHcCCCHHH--------H
Confidence            9999999999999999999986 778899999999976543456899999999999999999999976632        2


Q ss_pred             hHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccCC
Q 012536          160 QFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEK  239 (461)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~~  239 (461)
                      ++........              ..+.  +..+...++...+.+++.+.++++++.        ...|+++.|+.+.. 
T Consensus       166 ~~~~~~~~~~--------------~~~~--~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~ll~~~~-  220 (404)
T 1jfb_A          166 EYLTQQNAIR--------------TNGS--STAREASAANQELLDYLAILVEQRLVE--------PKDDIISKLCTEQV-  220 (404)
T ss_dssp             HHHHHHHHHH--------------HCTT--SCHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHHTT-
T ss_pred             HHHHHHHHHH--------------hccC--cchHHHHHHHHHHHHHHHHHHHHHHhC--------CCCcHHHHHHHhhc-
Confidence            2222211110              0011  123455667778888999998887764        34689999996543 


Q ss_pred             CCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcChHH
Q 012536          240 DPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYL  319 (461)
Q Consensus       240 ~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l  319 (461)
                      +++.++++++.+++..+++||+|||+.+++|++++|++||++|+||+++                           .+||
T Consensus       221 ~~~~l~~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~~---------------------------~~yl  273 (404)
T 1jfb_A          221 KPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN---------------------------PSLA  273 (404)
T ss_dssp             TTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHC---------------------------GGGH
T ss_pred             cCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHhC---------------------------hHhH
Confidence            2346999999999999999999999999999999999999999999862                           2699


Q ss_pred             HHHHHHhhcCCCCCC-CCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCcc
Q 012536          320 HAALSETLRLYPAVP-VDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKF  398 (461)
Q Consensus       320 ~a~i~E~lRl~~~~~-~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~  398 (461)
                      +|||+|++|++|+++ ...|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+||||+++        ..+
T Consensus       274 ~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeRf~~~--------~~~  343 (404)
T 1jfb_A          274 PQFVEELCRYHTASALAIKRTAKEDVMI-GDKLVRANEGIIASNQSANRDEEVF-ENPDEFNMNRKWPP--------QDP  343 (404)
T ss_dssp             HHHHHHHHHHSCSCCSCCEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCCCCS--------SCC
T ss_pred             HHHHHHHHhhCCCccccceeeeCCCeeE-CCEEECCCCEEEeCHHhhCCCchhC-CChhhcCCCCCCCC--------CCC
Confidence            999999999999999 567888787777 9999999999999999999999999 99999999999741        248


Q ss_pred             cccCCCCCCCCChHHHHHHHHHHHHHhccce-EEEeecC
Q 012536          399 AAFQAGPRICPGKEFAYRQMKILAAVLLQFF-RFKLVDE  436 (461)
Q Consensus       399 ~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~  436 (461)
                      +|||+|+|.|+|++||++|++++++.|+++| ++++..+
T Consensus       344 ~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~  382 (404)
T 1jfb_A          344 LGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVP  382 (404)
T ss_dssp             CTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred             CCCCCCCccCCCHHHHHHHHHHHHHHHHHHCCCceecCC
Confidence            9999999999999999999999999999999 7998754


No 53 
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=100.00  E-value=5.3e-59  Score=438.24  Aligned_cols=370  Identities=16%  Similarity=0.185  Sum_probs=292.1

Q ss_pred             chhhhhHHHHHHHHhc-Cc-EEEec-CCCCeEEecChhhHHhhhhcCccccCCChh--hHHHhH----hh--ccCceeee
Q 012536            7 HFSRLFDYQTSLAKKY-RT-FRLLQ-PSCSEIFTTDPVNIEHILKTNFSNYGKGDY--NWNLMR----DL--FGDGIFAV   75 (461)
Q Consensus         7 ~~~~~~~~~~~~~~~y-g~-~~~~~-~~~~~v~v~dp~~~~~il~~~~~~f~~~~~--~~~~~~----~~--~g~~l~~~   75 (461)
                      ..++++.++.+| ++| |+ |++.+ ++.++++|+||+++++||.++  .|++.+.  ....+.    ..  .+.++++.
T Consensus        22 ~~~~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   98 (412)
T 2zbx_A           22 CPYQLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDP--RLSSNRTDDNFPATSPRFEAVRESPQAFIGL   98 (412)
T ss_dssp             STTSCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEECCTTSTTSCCCSGGGC----CCCCGGGC
T ss_pred             hccChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCc--ccccCcccccccccccccccccccccccccC
Confidence            456899999999 777 85 77777 788999999999999999975  2444332  111110    01  24578888


Q ss_pred             CChhHHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHHH-HHHhHhhhhhccCCCCCCCCC
Q 012536           76 DGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLLK-SSLDSIFKVGFGVELNSLSGS  154 (461)
Q Consensus        76 ~~~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~-~~~~~i~~~~fG~~~~~~~~~  154 (461)
                      +++.|+++|++++++|++++++.+.+ .+++.++.+++.+..   .++++|+...+.. +++++++. +||.+.+.    
T Consensus        99 ~g~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~---~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~----  169 (412)
T 2zbx_A           99 DPPEHGTRRRMTISEFTVKRIKGMRP-EVEEVVHGFLDEMLA---AGPTADLVSQFALPVPSMVICR-LLGVPYAD----  169 (412)
T ss_dssp             CTTHHHHHHTTTGGGGSHHHHHHHHH-HHHHHHHHHHHHHHH---HCSCEEHHHHTTTHHHHHHHHH-HHTCCGGG----
T ss_pred             CcHHHHHHHHHhhhhcCHHHHHHHHH-HHHHHHHHHHHHHHh---cCCCccHHHHHHHHHHHHHHHH-HcCCCHHH----
Confidence            99999999999999999999999986 778899999998874   3458999998874 99999997 79976531    


Q ss_pred             CCccchHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHh
Q 012536          155 DDFGNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFL  234 (461)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll  234 (461)
                         ...+.+.+.....               . . .. ++..++...+.+++.+.++++++.        ...|+++.|+
T Consensus       170 ---~~~~~~~~~~~~~---------------~-~-~~-~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~ll  220 (412)
T 2zbx_A          170 ---HEFFQDASKRLVQ---------------S-T-DA-QSALTARNDLAGYLDGLITQFQTE--------PGAGLVGALV  220 (412)
T ss_dssp             ---HHHHHHHHHHHHH---------------C-S-SH-HHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHH
T ss_pred             ---HHHHHHHHHHHhc---------------c-C-cH-HHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHH
Confidence               0223222221110               0 0 11 455677788888999998887764        2368999999


Q ss_pred             hccCCCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhh
Q 012536          235 LESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALE  314 (461)
Q Consensus       235 ~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~  314 (461)
                      .+.. ++..++++++.+++..+++||+|||+.+++|++++|++||++|+||++|+                         
T Consensus       221 ~~~~-~~~~ls~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~-------------------------  274 (412)
T 2zbx_A          221 ADQL-ANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADR-------------------------  274 (412)
T ss_dssp             HTTT-TTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG-------------------------
T ss_pred             Hhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCh-------------------------
Confidence            8754 34569999999999999999999999999999999999999999999762                         


Q ss_pred             cChHHHHHHHHhhcCCCCCC-CCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCC
Q 012536          315 KMHYLHAALSETLRLYPAVP-VDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSE  393 (461)
Q Consensus       315 ~lp~l~a~i~E~lRl~~~~~-~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~  393 (461)
                        .||+|||+|++|++|+++ ...|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+||||-        
T Consensus       275 --~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~--------  342 (412)
T 2zbx_A          275 --SLVPGAVEELLRYLAIADIAGGRVATADIEV-EGQLIRAGEGVIVVNSIANRDGTVY-EDPDALDIHRSA--------  342 (412)
T ss_dssp             --GGHHHHHHHHHHHHCCCGGGCEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTSCC--------
T ss_pred             --HhHHHHHHHHHHhCCccccccceeeCCCeEE-CCEEECCCCEEEeChhhhcCCcccc-CCccccCCCCCC--------
Confidence              269999999999999999 578888888777 9999999999999999999999999 999999999972        


Q ss_pred             CCCcccccCCCCCCCCChHHHHHHHHHHHHHhccce-EEEeecCCCccceeeeEEEeeCCceeeE
Q 012536          394 SPYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFF-RFKLVDETKEATYRTMFTLHVDKGLHLY  457 (461)
Q Consensus       394 ~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  457 (461)
                        ..++|||+|+|.|+|++||++|++++++.|+++| +++++.+..++.............++|+
T Consensus       343 --~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~g~~~lpv~  405 (412)
T 2zbx_A          343 --RHHLAFGFGVHQCLGQNLARLELEVILNALMDRVPTLRLAVPVEQLVLRPGTTIQGVNELPVT  405 (412)
T ss_dssp             --TTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGSCBCCTTSCCCBSCCEEE
T ss_pred             --CCccCCCCCCCcCccHHHHHHHHHHHHHHHHHhcCcccccCCcccceeccccccCCcceeeee
Confidence              3589999999999999999999999999999999 7999754334444433333333445554


No 54 
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=100.00  E-value=5e-59  Score=439.44  Aligned_cols=357  Identities=17%  Similarity=0.174  Sum_probs=290.8

Q ss_pred             chhhhhHHHHHHHHhcCcEEEecC-CCCeEEecChhhHHhhhhcCccccCCChh---hHHHhHh-----hccCceeeeCC
Q 012536            7 HFSRLFDYQTSLAKKYRTFRLLQP-SCSEIFTTDPVNIEHILKTNFSNYGKGDY---NWNLMRD-----LFGDGIFAVDG   77 (461)
Q Consensus         7 ~~~~~~~~~~~~~~~yg~~~~~~~-~~~~v~v~dp~~~~~il~~~~~~f~~~~~---~~~~~~~-----~~g~~l~~~~~   77 (461)
                      ...+|+.++.+|+++.++|++.++ |.++++|+||+.+++++.++  .|++++.   +......     ..+.++++.++
T Consensus        27 ~~~dp~~~~~~l~~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg  104 (417)
T 3tyw_A           27 CPFAAPAEYAALRTDDPVARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIRTDA  104 (417)
T ss_dssp             STTSCCTHHHHHHHTCTEEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGGCCH
T ss_pred             cccCchHHHHHHHhhCCeeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhhcCC
Confidence            457999999999998335777776 68999999999999999986  5665321   1111111     23567889999


Q ss_pred             hhHHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhH-HHHHHhHhhhhhccCCCCCCCCCCC
Q 012536           78 DKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVL-LKSSLDSIFKVGFGVELNSLSGSDD  156 (461)
Q Consensus        78 ~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~  156 (461)
                      +.|+++|++++++|++++++.+.+ .+++.++.+++.+..   .++++|+...+ ..+++++++.+ ||.+.+..     
T Consensus       105 ~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~---~g~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~-----  174 (417)
T 3tyw_A          105 PEHTRYRRMLLPAFTVRRVRAMRP-AVQARVDEILDGMLA---AGGPVDLVSAYANAVSTSVICEL-LGIPRHDL-----  174 (417)
T ss_dssp             HHHHHHHHHHGGGGCHHHHHHTHH-HHHHHHHHHHHHHHH---HCSSEEHHHHTHHHHHHHHHHHH-HTCCTTTT-----
T ss_pred             cHHHHHHHHHHhhhCHHHHHHHHH-HHHHHHHHHHHHHHh---hCCCcchHHHHHHHHHHHHHHHH-hCCCHHHH-----
Confidence            999999999999999999999986 778899999998875   35579999988 58999999997 89876521     


Q ss_pred             ccchHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhc
Q 012536          157 FGNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLE  236 (461)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~  236 (461)
                        ..+..........                 ....+...++...+.+++.+.++++++.        ...|+++.|+.+
T Consensus       175 --~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~l~~~~~~~i~~r~~~--------~~~d~l~~ll~~  227 (417)
T 3tyw_A          175 --EFFRDVTRISGSR-----------------NSTAEQVSEALGGLFGLLGGLVAERREE--------PRDDLISKLVTD  227 (417)
T ss_dssp             --THHHHHHHHHHSS-----------------SSCTTHHHHHHHHHHHHHHHHHHHHHSS--------CCSSHHHHHHHH
T ss_pred             --HHHHHHHHHHhcc-----------------cCCHHHHHHHHHHHHHHHHHHHHHHhhC--------CCCCHHHHHHHh
Confidence              2222222111100                 0122345677788888999999888763        347999999988


Q ss_pred             cCCCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcC
Q 012536          237 SEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKM  316 (461)
Q Consensus       237 ~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (461)
                      ..++ +.++++++.+++..+++||+|||+.+++|++++|++||++|++|++|++                          
T Consensus       228 ~~~~-~~ls~~el~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~--------------------------  280 (417)
T 3tyw_A          228 HLVP-GNVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKDPD--------------------------  280 (417)
T ss_dssp             TTTT-TSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTHHHHHHHHCGG--------------------------
T ss_pred             cccC-CCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH--------------------------
Confidence            6543 4699999999999999999999999999999999999999999998732                          


Q ss_pred             hHHHHHHHHhhcCCCCCCC-CCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCC
Q 012536          317 HYLHAALSETLRLYPAVPV-DGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESP  395 (461)
Q Consensus       317 p~l~a~i~E~lRl~~~~~~-~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~  395 (461)
                       ||+|||+|++|++|+++. ..|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+|+||.          
T Consensus       281 -~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~----------  347 (417)
T 3tyw_A          281 -LMPAAVDELLRVLSVADSIPLRVAAEDIEL-SGRTVPADDGVIALLAGANHDPEQF-DDPERVDFHRTD----------  347 (417)
T ss_dssp             -GHHHHHHHHHHHHCSCTTCCEEEESSCEEC-SSCEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCSC----------
T ss_pred             -HHHHHHHHHHHhccccccCceeEeCCCeEE-CCEEECCCCEEEEehhhhcCChhhc-CCccccCCCCCC----------
Confidence             689999999999999998 47888888777 9999999999999999999999999 999999999993          


Q ss_pred             CcccccCCCCCCCCChHHHHHHHHHHHHHhccce-EEEeecCCCccce
Q 012536          396 YKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFF-RFKLVDETKEATY  442 (461)
Q Consensus       396 ~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~  442 (461)
                      ..++|||+|+|.|+|++||++|++++++.|+++| +|+++.+..++.+
T Consensus       348 ~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~fp~~~l~~~~~~~~~  395 (417)
T 3tyw_A          348 NHHVAFGYGVHQCVGQHLARLELEVALETLLRRVPTLRLAGERDQVVV  395 (417)
T ss_dssp             CCCCTTCCSTTCCSCHHHHHHHHHHHHHHHHHHCTTCEECSCTTCCEE
T ss_pred             CCCCCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCcccccCCCcccee
Confidence            3589999999999999999999999999999999 9999854444433


No 55 
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=100.00  E-value=1.9e-59  Score=439.50  Aligned_cols=375  Identities=15%  Similarity=0.168  Sum_probs=289.1

Q ss_pred             cccccchhhhhHHHHHHHHhcCc-EEEecC-CC---CeEEecChhhHHhhhhcCccccCCChh------hH--HHhH-hh
Q 012536            2 LNLLIHFSRLFDYQTSLAKKYRT-FRLLQP-SC---SEIFTTDPVNIEHILKTNFSNYGKGDY------NW--NLMR-DL   67 (461)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~yg~-~~~~~~-~~---~~v~v~dp~~~~~il~~~~~~f~~~~~------~~--~~~~-~~   67 (461)
                      |..+...+.++.++.+|+++ |+ |++.++ |.   ++++|+||+.+++++.++ ..|++++.      ..  .... ..
T Consensus         6 p~~~~~~~~~~~~~~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~   83 (398)
T 1lfk_A            6 PRPLHIRRQGLDPADELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDH-QQFSTRRRWDPRDEIGGKGIFRPRE   83 (398)
T ss_dssp             CSCGGGCEETTEECHHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCT-TTEEECTTCCC-------------C
T ss_pred             CCCCCcCcCCCChhHHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhC-cccccccccccccccCCcccccccc
Confidence            34444556677778888887 65 666654 55   899999999999999433 35665543      11  1111 12


Q ss_pred             ccCceeeeCChhHHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHHH-HHHhHhhhhhccC
Q 012536           68 FGDGIFAVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLLK-SSLDSIFKVGFGV  146 (461)
Q Consensus        68 ~g~~l~~~~~~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~-~~~~~i~~~~fG~  146 (461)
                      .+.++++.+++.|+++|++++++|++++++.+.+ .+++.++.+++.+..   .++++|+...+.. ++.++++. +||.
T Consensus        84 ~~~~l~~~~g~~~~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~  158 (398)
T 1lfk_A           84 LVGNLMDYDPPEHTRLRRKLTPGFTLRKMQRMAP-YIEQIVNDRLDEMER---AGSPADLIAFVADKVPGAVLCE-LVGV  158 (398)
T ss_dssp             CTTCGGGCCTTHHHHHHHHHGGGGCHHHHHHHHH-HHHHHHHHHHHHHHH---HCSSEEHHHHTTTTHHHHHHHH-HHTC
T ss_pred             cccCccccCCHHHHHHHHHHHhhhCHHHHHHHHH-HHHHHHHHHHHHHHh---cCCCccHHHHHHHHHHHHHHHH-HcCC
Confidence            3567888899999999999999999999999986 778899999998864   3457999999887 89999997 5897


Q ss_pred             CCCCCCCCCCccchHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCh
Q 012536          147 ELNSLSGSDDFGNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGK  226 (461)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  226 (461)
                      +.+.       ...+.+.+.....               .  ....+...++...+.+++.+.++++++.        ..
T Consensus       159 ~~~~-------~~~~~~~~~~~~~---------------~--~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~  206 (398)
T 1lfk_A          159 PRDD-------RDMFMKLCHGHLD---------------A--SLSQKRRAALGDKFSRYLLAMIARERKE--------PG  206 (398)
T ss_dssp             CGGG-------HHHHHHHHHHTTC---------------T--TSCHHHHHHHHHHHHHHHHHHHHHHHHS--------CC
T ss_pred             CHHH-------HHHHHHHHHHHHh---------------c--ccchHHHHHHHHHHHHHHHHHHHHHHhC--------CC
Confidence            7531       0223332222110               0  0122455677788888999999888764        33


Q ss_pred             hhHHHHHhhccCCCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhh
Q 012536          227 EDILSRFLLESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAK  306 (461)
Q Consensus       227 ~~~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~  306 (461)
                      +|+++.|+.+.   ++.++++++.+++..+++||+|||+.+++|++++|++||++|+|+++|++                
T Consensus       207 ~dll~~ll~~~---~~~l~~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~----------------  267 (398)
T 1lfk_A          207 EGMIGAVVAEY---GDDATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQ----------------  267 (398)
T ss_dssp             SSHHHHHHHHH---GGGSCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHSGGGGGGGSSCHH----------------
T ss_pred             CCHHHHHHHhc---CCCCCHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH----------------
Confidence            68999999765   23599999999999999999999999999999999999999999997743                


Q ss_pred             cccHHHhhcChHHHHHHHHhhcCCCCCC-CCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcC
Q 012536          307 LVTEAALEKMHYLHAALSETLRLYPAVP-VDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWL  385 (461)
Q Consensus       307 ~~~~~~l~~lp~l~a~i~E~lRl~~~~~-~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~  385 (461)
                                 |++|||+|++|++|+++ ..+|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+||||.
T Consensus       268 -----------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~  334 (398)
T 1lfk_A          268 -----------SAQRAVDELIRYLTVPYSPTPRIAREDLTL-AGQEIKKGDSVICSLPAANRDPALA-PDVDRLDVTREP  334 (398)
T ss_dssp             -----------HHHHHHHHHHHHHCCBSCCSCEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTC-TTTTSCCTTSCC
T ss_pred             -----------HHHHHHHHHHHhCcccccccceecCCCeeE-CCEEECCCCEEEeChHHhCCCchhc-CCccccCCCCCC
Confidence                       68999999999999999 578888888777 9999999999999999999999999 999999999983


Q ss_pred             CCCccCCCCCCcccccCCCCCCCCChHHHHHHHHHHHHHhccce-EEEeecCCCccceeeeEEEeeCCceeeE
Q 012536          386 VNGVFRSESPYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFF-RFKLVDETKEATYRTMFTLHVDKGLHLY  457 (461)
Q Consensus       386 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  457 (461)
                                ..++|||+|+|.|+|++||++|++++++.|+++| ++++..+..++.+...........++|+
T Consensus       335 ----------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~  397 (398)
T 1lfk_A          335 ----------IPHVAFGHGVHHCLGAALARLELRTVFTELWRRFPALRLADPAQDTEFRLTTPAYGLTELMVA  397 (398)
T ss_dssp             ----------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSTTCCCEEECSSSBCEEEECEEE
T ss_pred             ----------CCCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHhCCCCEeCCCCCccccccCcCcCCcccceee
Confidence                      2479999999999999999999999999999999 7999754334444333323333344443


No 56 
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=100.00  E-value=1.5e-59  Score=441.56  Aligned_cols=372  Identities=16%  Similarity=0.200  Sum_probs=291.2

Q ss_pred             chhhhhHHHHHHHHhcCc-EEEec-CCCCeEEecChhhHHhhhhcCccccCCChhhHHH-----hHhh-----ccCc-ee
Q 012536            7 HFSRLFDYQTSLAKKYRT-FRLLQ-PSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWNL-----MRDL-----FGDG-IF   73 (461)
Q Consensus         7 ~~~~~~~~~~~~~~~yg~-~~~~~-~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~~-----~~~~-----~g~~-l~   73 (461)
                      ...+|+.++.+|+ +||+ |++.+ +++++++|+||+.+++++.++  .|++++.....     ....     .+.+ ++
T Consensus        20 ~~~~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   96 (413)
T 2z36_A           20 CPFAPPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKDGFPLFTLDAATLQQLRSQPPLML   96 (413)
T ss_dssp             BTTBCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHCT--TEECCTTSTTCCCSSCCHHHHHHHTTSCCCGG
T ss_pred             cccCchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcCC--CcccCccccCcccccccccccccccccccccc
Confidence            3468999999998 6775 77776 789999999999999999974  57665422110     1123     2677 88


Q ss_pred             eeCChhHHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhH-HHHHHhHhhhhhccCCCCCCC
Q 012536           74 AVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVL-LKSSLDSIFKVGFGVELNSLS  152 (461)
Q Consensus        74 ~~~~~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~  152 (461)
                      +.+++.|+++|++++++|++++++.+.+ .+++.++.+++.+.+  ..++++|+...+ ..+++++++.+ ||.+.+.. 
T Consensus        97 ~~~g~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~ll~~l~~--~~~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~-  171 (413)
T 2z36_A           97 GMDGAEHSAARRPVIGEFTVKRLAALRP-RIQDIVDHFIDDMLA--TDQRPVDLVQALSLPVPSLVICEL-LGVPYTDH-  171 (413)
T ss_dssp             GCCHHHHHHHHHHHHGGGSHHHHHHHHH-HHHHHHHHHHHHHTT--CSCSSEEHHHHTTTHHHHHHHHHH-HTCCGGGH-
T ss_pred             ccCchHHHHHHHHHHHhhCHHHHHHHHH-HHHHHHHHHHHHHHH--hcCCCccHHHHHhhhhHHHHHHHH-hCCCHHHH-
Confidence            8999999999999999999999999986 778889999988863  225689998655 46999999994 89765320 


Q ss_pred             CCCCccchHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHH
Q 012536          153 GSDDFGNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSR  232 (461)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~  232 (461)
                            ..+.........               ... +  +...++...+.+++.+.++++++.        ..+|+++.
T Consensus       172 ------~~~~~~~~~~~~---------------~~~-~--~~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~~  219 (413)
T 2z36_A          172 ------DFFQSRTTMMVS---------------RTS-M--EDRRRAFAELRAYIDDLITRKESE--------PGDDLFSR  219 (413)
T ss_dssp             ------HHHHHHHHHTTC---------------SSC-H--HHHHHHHHHHHHHHHHHHHHHHSS--------CCSSHHHH
T ss_pred             ------HHHHHHHHHHhc---------------ccC-c--HHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHH
Confidence                  122222111100               000 1  445567778888888888887753        33589999


Q ss_pred             HhhccCCCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHH
Q 012536          233 FLLESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAA  312 (461)
Q Consensus       233 ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~  312 (461)
                      |+.+.+ ++..++++++.+++..+++||+|||+.+++|++++|++||++|+|+++|+                       
T Consensus       220 ll~~~~-~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~-----------------------  275 (413)
T 2z36_A          220 QIARQR-QEGTLDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVKANP-----------------------  275 (413)
T ss_dssp             HHHHHH-HHSCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG-----------------------
T ss_pred             HHHhhc-CCCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhCHHHHHHHHhCh-----------------------
Confidence            987642 23469999999999999999999999999999999999999999999873                       


Q ss_pred             hhcChHHHHHHHHhhcCCCCCC-CCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccC
Q 012536          313 LEKMHYLHAALSETLRLYPAVP-VDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFR  391 (461)
Q Consensus       313 l~~lp~l~a~i~E~lRl~~~~~-~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~  391 (461)
                          .||+|||+|++|++|+++ ..+|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+||||.      
T Consensus       276 ----~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~------  343 (413)
T 2z36_A          276 ----GRTPMAVEELLRYFTIADGVTSRLATEDVEI-GGVSIKAGEGVIVSMLSANWDPAVF-KDPAVLDVERGA------  343 (413)
T ss_dssp             ----GGHHHHHHHHHHHHCTTTTCEEEEECSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCCC------
T ss_pred             ----HHHHHHHHHHHHhCCCcccceeeeeCCCEEE-CCEEECCCCEEEEChHhhcCChhhC-CCccccCCCCCC------
Confidence                269999999999999999 668888888777 9999999999999999999999999 999999999983      


Q ss_pred             CCCCCcccccCCCCCCCCChHHHHHHHHHHHHHhccce-EEEeecCCCccceeeeEEEeeCCceeeEE
Q 012536          392 SESPYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFF-RFKLVDETKEATYRTMFTLHVDKGLHLYA  458 (461)
Q Consensus       392 ~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  458 (461)
                          ..++|||+|+|.|+|++||++|++++++.|+++| +++++++..++.+...........++|++
T Consensus       344 ----~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~g~~~lpv~~  407 (413)
T 2z36_A          344 ----RHHLAFGFGPHQCLGQNLARMELQIVFDTLFRRIPSLRLAVPMEDVPFKGDSVIYGVHELPVTW  407 (413)
T ss_dssp             ----CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBCTTSSSCCBSCCEEEC
T ss_pred             ----CCCCCCCCCCccCccHHHHHHHHHHHHHHHHHhCCCccccCCcccceecccccccCcceeeEEe
Confidence                2479999999999999999999999999999999 58997653333333322233333455543


No 57 
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=100.00  E-value=1.3e-59  Score=441.93  Aligned_cols=368  Identities=14%  Similarity=0.118  Sum_probs=296.0

Q ss_pred             hhhhhHHHHHHHHhcC--c-EEEecCCCCeEEecChhhHHhhhhcCccccCCCh-hhHHHhHhhccCc-eeeeCChhHHH
Q 012536            8 FSRLFDYQTSLAKKYR--T-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGD-YNWNLMRDLFGDG-IFAVDGDKWRH   82 (461)
Q Consensus         8 ~~~~~~~~~~~~~~yg--~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~-~~~~~~~~~~g~~-l~~~~~~~~~~   82 (461)
                      .++++.++.+|+ +||  + |++...| ++++|+||++++++|.+. +.|++++ .+. ......+.+ +++.+++.|++
T Consensus        36 ~~~p~~~~~~l~-~~G~~pv~~~~~~g-~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~-~~~~~~~~~~l~~~~g~~~~~  111 (415)
T 2zwu_A           36 SAGVQEAWAVLQ-ESNVPDLVWTRCNG-GHWIATRGQLIREAYEDY-RHFSSECPFIP-REAGEAYDFIPTSMDPPEQRQ  111 (415)
T ss_dssp             GGCHHHHHHGGG-STTSCSEEEECGGG-CEEEECSHHHHHHHHHCT-TTEETTSCSSS-HHHHHHCCCTTTTCCTTTTHH
T ss_pred             ccChHHHHHHHH-hcCCCCeEEecCCC-CeEEEcCHHHHHHHHcCc-cccCCCcccCC-CCccccccccCccCCCcHHHH
Confidence            568999999996 688  7 5555234 699999999999999865 5788765 222 222233677 88899999999


Q ss_pred             HHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhH-HHHHHhHhhhhhccCCCCCCCCCCCccchH
Q 012536           83 QRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVL-LKSSLDSIFKVGFGVELNSLSGSDDFGNQF  161 (461)
Q Consensus        83 ~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~  161 (461)
                      +|++++++|++++++.+.+ .+.+.++.+++.+..   . +.+|+...+ ..+++++++.+ ||.+++..       .++
T Consensus       112 ~R~~~~~~f~~~~l~~~~~-~i~~~~~~l~~~l~~---~-~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~-------~~~  178 (415)
T 2zwu_A          112 FRALANQVVGMPVVDKLEN-RIQELACSLIESLRP---Q-GQCNFTEDYAEPFPIRIFMLL-AGLPEEDI-------PHL  178 (415)
T ss_dssp             HHHHHHHHHSHHHHHHHHH-HHHHHHHHHHHHHGG---G-TEEEHHHHTTTHHHHHHHHHH-HTCCGGGH-------HHH
T ss_pred             HHHHHHhhhCHHHHHHHHH-HHHHHHHHHHHHHHh---c-CCccHHHHHHHHHHHHHHHHH-cCCCHHHH-------HHH
Confidence            9999999999999999986 778889999988864   2 379999754 88999999999 99876421       233


Q ss_pred             HHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccCCCC
Q 012536          162 TKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEKDP  241 (461)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~  241 (461)
                      .+.+......     ..         +.    +..++...+.+++.+.++++++.        ...|+++.|+.+.. ++
T Consensus       179 ~~~~~~~~~~-----~~---------P~----~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~~ll~~~~-~~  231 (415)
T 2zwu_A          179 KYLTDQMTRP-----DG---------SM----TFAEAKEALYDYLIPIIEQRRQK--------PGTDAISIVANGQV-NG  231 (415)
T ss_dssp             HHHHHHHHSC-----CS---------SS----CHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHTCEE-TT
T ss_pred             HHHHHHHHhc-----cC---------HH----HHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHHhhh-cC
Confidence            3332221110     00         11    34567778888999999888763        34689999998753 23


Q ss_pred             CCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcChHHHH
Q 012536          242 ESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLHA  321 (461)
Q Consensus       242 ~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a  321 (461)
                      ..++++++.+++..+++||+|||+.+++|++++|++||++|+++++|++                           ||+|
T Consensus       232 ~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~---------------------------~l~a  284 (415)
T 2zwu_A          232 RPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPE---------------------------RIPA  284 (415)
T ss_dssp             EECCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------------------GHHH
T ss_pred             CCCCHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------------------HHHH
Confidence            4599999999999999999999999999999999999999999998831                           7999


Q ss_pred             HHHHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCccccc
Q 012536          322 ALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAF  401 (461)
Q Consensus       322 ~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~~F  401 (461)
                      ||+|++|++|+++.. |.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+||||-          ..++||
T Consensus       285 ~i~E~lRl~p~~~~~-R~~~~d~~~-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~----------~~~l~F  351 (415)
T 2zwu_A          285 ACEELLRRFSLVADG-RILTSDYEF-HGVQLKKGDQILLPQMLSGLDEREN-ACPMHVDFSRQK----------VSHTTF  351 (415)
T ss_dssp             HHHHHHHHTCCBCCE-EEESSCEEE-TTEEECTTCEEECCHHHHHHCTTTS-SSTTSCCTTCSS----------CCCCTT
T ss_pred             HHHHHHhhcCCcCCc-eeeCCCEEE-CCEEECCCCEEEeCchhhCCCchhC-CCccccCCCCCC----------CCCCCC
Confidence            999999999999987 888888777 9999999999999999999999999 999999999962          357999


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHhccceE-EEeecCCCccceeeeEEEeeCCceeeEEeeC
Q 012536          402 QAGPRICPGKEFAYRQMKILAAVLLQFFR-FKLVDETKEATYRTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       402 g~G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  461 (461)
                      |+|+|.|+|++||++|++++++.|+++|+ ++++++ .++. .......+..+++|+++||
T Consensus       352 G~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~-~~~~~~~~~~~lpv~~~~r  410 (415)
T 2zwu_A          352 GHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPG-AQIQ-HKSGIVSGVQALPLVWDPA  410 (415)
T ss_dssp             CCGGGCCSSHHHHHHHHHHHHHHHHHHCCSCEECTT-CCCC-EECSSBCEESCCEEECCGG
T ss_pred             CCCCccCCCHHHHHHHHHHHHHHHHHhCCCCEECCC-cccc-cCCccccCcceeEEEEecC
Confidence            99999999999999999999999999998 999763 2331 2333445666889988876


No 58 
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=100.00  E-value=5.7e-59  Score=442.55  Aligned_cols=383  Identities=17%  Similarity=0.132  Sum_probs=295.2

Q ss_pred             hhhhHHHHHHHHhcCc-E--EEe-cCCCCeEEecChhhHHhhhhcCccccCCChhhHH---Hh-----Hh------hccC
Q 012536            9 SRLFDYQTSLAKKYRT-F--RLL-QPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWN---LM-----RD------LFGD   70 (461)
Q Consensus         9 ~~~~~~~~~~~~~yg~-~--~~~-~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~---~~-----~~------~~g~   70 (461)
                      ++|+.++.++ ++||+ +  ... .++.++++|++++.++++++++ ..|++++....   ..     ..      ..+.
T Consensus        45 ~~p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~  122 (450)
T 3tkt_A           45 EPLLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVE  122 (450)
T ss_dssp             HHHHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSC
T ss_pred             CCchHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCc-ccccCCCcccccccccccccccccccccccccc
Confidence            4599999999 56775 5  555 6778999999999999999887 67776543210   00     01      1335


Q ss_pred             ceeeeCChhHHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhH-HHHHHhHhhhhhccCCCC
Q 012536           71 GIFAVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVL-LKSSLDSIFKVGFGVELN  149 (461)
Q Consensus        71 ~l~~~~~~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~  149 (461)
                      +++..+++.|+++|++++++|++++++.+.+ .+++.++.+++.+.+   .++++|+...+ ..+++++|+.+ ||.+..
T Consensus       123 ~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~ll~~l~~---~~~~~dl~~~~~~~~~~~vi~~l-~G~~~~  197 (450)
T 3tkt_A          123 SLVQMDAPKHPKLRRLTQDWFMPKNLARLDG-EIRKIANEAIDRMLG---AGEEGDFMALVAAPYPLHVVMQI-LGVPPE  197 (450)
T ss_dssp             CGGGCCTTHHHHHHHHHHTTTSHHHHGGGHH-HHHHHHHHHHHHHHH---TCSEEEHHHHTTTHHHHHHHHHH-TTCCGG
T ss_pred             CcccCCCHHHHHHHHHhhhhhCHHHHHHHHH-HHHHHHHHHHHHHHh---cCCCEeeHHHHHHHHHHHHHHHH-cCCChh
Confidence            7888999999999999999999999999986 778899999998875   25689998887 69999999995 896543


Q ss_pred             CCCCCCCccchHHHHhhhhhhHHHhhhhhHHHHHHHhhc--hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChh
Q 012536          150 SLSGSDDFGNQFTKAFDDSNFIVYCRYVDVFWELKRYLN--IGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKE  227 (461)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  227 (461)
                      .       ...+.+....+......    .+..+..++.  ....+...++...+.+++.+.++++++.        ..+
T Consensus       198 ~-------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~  258 (450)
T 3tkt_A          198 D-------EPKMLFLTQQMFGGQDE----DMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRN--------PTD  258 (450)
T ss_dssp             G-------HHHHHHHHHTTSCCC--------------------HHHHHHHHHHHHHHHHHHHHHHHHHS--------CCS
T ss_pred             H-------HHHHHHHHHHHhccccc----hhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCC
Confidence            1       13333333332211110    0111111111  1234566677888889999999888764        346


Q ss_pred             hHHHHHhhccCCCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhc
Q 012536          228 DILSRFLLESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKL  307 (461)
Q Consensus       228 ~~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~  307 (461)
                      |+++.|+.+.. ++..++++++.+++..+++||+|||+.+++|++++|++||++|+||++|+                  
T Consensus       259 dll~~ll~~~~-~~~~ls~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~------------------  319 (450)
T 3tkt_A          259 DVATVIANAVV-DGEPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADR------------------  319 (450)
T ss_dssp             SHHHHHHTCEE-TTEECCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG------------------
T ss_pred             CHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHCH------------------
Confidence            89999998764 34569999999999999999999999999999999999999999999873                  


Q ss_pred             ccHHHhhcChHHHHHHHHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCC
Q 012536          308 VTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVN  387 (461)
Q Consensus       308 ~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~  387 (461)
                               +|++|||+|+||++|+++...|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+||||.  
T Consensus       320 ---------~~l~a~i~E~LRl~pp~~~~~R~~~~d~~l-~G~~Ip~G~~V~~~~~~~~rDp~~~-~dP~~F~PeR~~--  386 (450)
T 3tkt_A          320 ---------NLLPGIVEEAIRWTTPVQHFMRTAATDTEL-CGQKIAAGDWLMLNYVAANHDPAQF-PEPRKFDPTRPA--  386 (450)
T ss_dssp             ---------GGHHHHHHHHHHHHCSBCEEEEEESSSEEE-TTEEECTTCEEEEEHHHHHTCTTTS-SSTTSCCTTSCT--
T ss_pred             ---------HHHHHHHHHHHHhCCCccCcceeeCCCeeE-CCEEECCCCEEEEChHHhcCChhhC-CCcCeeCCCCCC--
Confidence                     368999999999999999778888888777 9999999999999999999999999 999999999952  


Q ss_pred             CccCCCCCCcccccCCCCCCCCChHHHHHHHHHHHHHhccceE-EEeecCCCccceeeeEEEeeCCceeeEEee
Q 012536          388 GVFRSESPYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFFR-FKLVDETKEATYRTMFTLHVDKGLHLYAYP  460 (461)
Q Consensus       388 ~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  460 (461)
                              ..++|||+|+|.|+|++||++|++++++.|+++|+ +++++ +.++  ...........++|++++
T Consensus       387 --------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~-~~~~--~~~~~~~g~~~lpv~~~~  449 (450)
T 3tkt_A          387 --------NRHLAFGAGSHQCLGLHLARLEMRVLLDVLLDRVDSLELAG-EPKR--VNSTFVGGFKSLPMRWKA  449 (450)
T ss_dssp             --------TCSSTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEEESS-CCEE--CCCSSBCCEEECEEEEEE
T ss_pred             --------CCCCCCCCcCccCccHHHHHHHHHHHHHHHHHhCCCceeCC-Cccc--ccCcccCCcccceEEEec
Confidence                    35799999999999999999999999999999998 67653 2222  111222223356777764


No 59 
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=100.00  E-value=6.6e-59  Score=439.17  Aligned_cols=377  Identities=15%  Similarity=0.176  Sum_probs=297.8

Q ss_pred             chhhhhHHHHHHHHhcC--cEEEecCCCCeEEecChhhHHhhhhcCccccCCChhhH-HHhHhhccCceeeeCChhHHHH
Q 012536            7 HFSRLFDYQTSLAKKYR--TFRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNW-NLMRDLFGDGIFAVDGDKWRHQ   83 (461)
Q Consensus         7 ~~~~~~~~~~~~~~~yg--~~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~-~~~~~~~g~~l~~~~~~~~~~~   83 (461)
                      ...+|+.++.++++++|  +|....++ ++++|+||+.+++|+++. +.|++++... .......+.++++.+++.|+++
T Consensus        36 ~~~dp~~~~~~lr~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~dg~~h~~~  113 (421)
T 3lxh_A           36 LEQGFHEAWKRVQQPDTPPLVWTPFTG-GHWIATRGTLIDEIYRSP-ERFSSRVIWVPREAGEAYDMVPTKLDPPEHTPY  113 (421)
T ss_dssp             GGGCHHHHHHHHCCTTCCSEEEESSTT-SEEEECSHHHHHHHHTCT-TTEETTCCSSSHHHHHHCCCTTTTCCTTTHHHH
T ss_pred             hhcChhHHHHHHHhcCCCCeEeccCCC-CeEEEcCHHHHHHHHcCh-hhccCCcccCCcccccccccCCccCCcHHHHHH
Confidence            34689999999998883  46666554 599999999999999665 6787765321 1222233467888999999999


Q ss_pred             HhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhH-HHHHHhHhhhhhccCCCCCCCCCCCccchHH
Q 012536           84 RKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVL-LKSSLDSIFKVGFGVELNSLSGSDDFGNQFT  162 (461)
Q Consensus        84 R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~  162 (461)
                      |++++++|++++++.+.+ .+++.++.+++.+..    ++.+|+...+ ..++.++++. +||.+.+.       ...+.
T Consensus       114 R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~----~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~-------~~~~~  180 (421)
T 3lxh_A          114 RKAIDKGLNLAEIRKLED-QIRTIAVEIIEGFAD----RGHCEFGSEFSTVFPVRVFLA-LAGLPVED-------ATKLG  180 (421)
T ss_dssp             HHHHHHHHSHHHHHTTHH-HHHHHHHHHHHTTTT----TSEEEHHHHTTTTHHHHHHHH-HHTCCGGG-------HHHHH
T ss_pred             HHHHhhhcCHHHHHHHHH-HHHHHHHHHHHHHhh----cCCeehHHHHHHHHHHHHHHH-HcCCCHHH-------HHHHH
Confidence            999999999999999986 677888888887643    3478976555 6678888776 58865432       12333


Q ss_pred             HHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccCCCCC
Q 012536          163 KAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEKDPE  242 (461)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~  242 (461)
                      +.+..+...            ..+++....+...++...+.+++.+.++++++.        ..+|+++.|+.+.. ++.
T Consensus       181 ~~~~~~~~~------------~~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~~ll~~~~-~~~  239 (421)
T 3lxh_A          181 LLANEMTRP------------SGNTPEEQGRSLEAANKGFFEYVAPIIAARRGG--------SGTDLITRILNVEI-DGK  239 (421)
T ss_dssp             HHHHHHHSC------------CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--------CCCSHHHHHHTSCB-TTB
T ss_pred             HHHHHHhcc------------ccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHhhhc-cCC
Confidence            322222110            001222234566788888999999999888765        34699999998764 345


Q ss_pred             CCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcChHHHHH
Q 012536          243 SMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLHAA  322 (461)
Q Consensus       243 ~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~  322 (461)
                      .++++++++++..+++||+|||+.+++|++++|++||++|++|++|++                           |++||
T Consensus       240 ~l~~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~---------------------------~l~a~  292 (421)
T 3lxh_A          240 PMPDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRREPL---------------------------KLQRG  292 (421)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHH---------------------------HHHHH
T ss_pred             CCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------------------HHHHH
Confidence            699999999999999999999999999999999999999999998854                           68999


Q ss_pred             HHHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCcccccC
Q 012536          323 LSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQ  402 (461)
Q Consensus       323 i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~~Fg  402 (461)
                      |+|+||++|++ ...|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+||||          ...++|||
T Consensus       293 i~E~lRl~p~~-~~~R~~~~d~~l-~G~~Ip~G~~V~~~~~~~~rdp~~~-~dP~~F~PeR~----------~~~~l~FG  359 (421)
T 3lxh_A          293 VEELFRRFAVV-SDARYVVSDMEF-HGTMLKEGDLILLPTALHGLDDRHH-DDPMTVDLSRR----------DVTHSTFA  359 (421)
T ss_dssp             HHHHHHHCCCB-EEEEEECSCEEE-TTEEECTTCEEEEETHHHHTCTTTS-SSTTSCCTTCS----------CCCCCTTC
T ss_pred             HHHHHHhcCcc-CCceeeCCCeeE-CCEEECCCCEEEEchhhhCCChhhC-CCcCeeCCCCC----------CCCCCCCC
Confidence            99999999999 888888888777 9999999999999999999999999 99999999995          34689999


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHhccce-EEEeecCCCccceeeeEEEeeCCceeeEEeeC
Q 012536          403 AGPRICPGKEFAYRQMKILAAVLLQFF-RFKLVDETKEATYRTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       403 ~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  461 (461)
                      +|+|.|+|++||++|++++++.|+++| +|++++++ +..........+ ..++|+++||
T Consensus       360 ~G~r~C~G~~lA~~e~~~~l~~ll~~fp~~~l~~~~-~~~~~~~~~~~~-~~lpv~~~p~  417 (421)
T 3lxh_A          360 QGPHRCAGMHLARLEVTVMLQEWLARIPEFRLKDRA-VPIYHSGIVAAV-ENIPLEWEPQ  417 (421)
T ss_dssp             CGGGSCTTHHHHHHHHHHHHHHHHHHCCCCEECTTC-CCEEECSSBCEE-ECCEEECCCC
T ss_pred             CcCccCcCHHHHHHHHHHHHHHHHHhCCCcEECCCC-CceeccccccCc-eeeeEEEecc
Confidence            999999999999999999999999999 99998653 333333333333 3688888875


No 60 
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=100.00  E-value=6.3e-59  Score=436.88  Aligned_cols=370  Identities=16%  Similarity=0.180  Sum_probs=291.2

Q ss_pred             chhhhhHHHHHHHHhcCc-EEEec-CCCC-eEEecChhhHHhhhhcCccccCCChhhHHH---hHh-h--ccCceeeeCC
Q 012536            7 HFSRLFDYQTSLAKKYRT-FRLLQ-PSCS-EIFTTDPVNIEHILKTNFSNYGKGDYNWNL---MRD-L--FGDGIFAVDG   77 (461)
Q Consensus         7 ~~~~~~~~~~~~~~~yg~-~~~~~-~~~~-~v~v~dp~~~~~il~~~~~~f~~~~~~~~~---~~~-~--~g~~l~~~~~   77 (461)
                      ...+|+.++.+++ +||+ |++.+ +|.+ +++|+||+.+++||.++  .|++++.....   +.. .  .+.++++.++
T Consensus        22 ~~~~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~dg   98 (406)
T 1s1f_A           22 PGSDFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRLVTNDP--RFGREAVMDRQVTRLAPHFIPARGAVGFLDP   98 (406)
T ss_dssp             CTTCCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHHHHTCT--TEESTTTTTTTBCBSSSSCSSCTTSGGGCCT
T ss_pred             cccCchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHHHHcCC--CccCCcCCCCCcccccccccccccccccCCc
Confidence            4578999999996 6875 66665 4666 99999999999999973  57776543211   111 2  3577888999


Q ss_pred             hhHHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhH-HHHHHhHhhhhhccCCCCCCCCCCC
Q 012536           78 DKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVL-LKSSLDSIFKVGFGVELNSLSGSDD  156 (461)
Q Consensus        78 ~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~  156 (461)
                      +.|+++|++++++|++++++.+.+ .+++.++.+++.+.+   .++++|+...+ ..+++++++. +||.+.+..     
T Consensus        99 ~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~-----  168 (406)
T 1s1f_A           99 PDHTRLRRSVAAAFTARGVERVRE-RSRGMLDELVDAMLR---AGPPADLTEAVLSPFPIAVICE-LMGVPATDR-----  168 (406)
T ss_dssp             THHHHHHHHHHHHHSHHHHHHHHH-HHHHHHHHHHHHHHH---HCSSEEHHHHTTTHHHHHHHHH-HHTCCGGGH-----
T ss_pred             hHHHHHHHHHHHhhCHHHHHHHHH-HHHHHHHHHHHHHHh---cCCCccHHHHHhhHhHHHHHHH-HhCCCHHHH-----
Confidence            999999999999999999999986 778899999998874   24589998666 5799999998 699765321     


Q ss_pred             ccchHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhc
Q 012536          157 FGNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLE  236 (461)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~  236 (461)
                        ..+...+......     .         .+   .+...++...+.+++.+.++++++.        ...|+++.|+.+
T Consensus       169 --~~~~~~~~~~~~~-----~---------~~---~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~ll~~  221 (406)
T 1s1f_A          169 --HSMHTWTQLILSS-----S---------HG---AEVSERAKNEMNAYFSDLIGLRSDS--------AGEDVTSLLGAA  221 (406)
T ss_dssp             --HHHHHHHHHHHHH-----H---------TT---CCCCHHHHTHHHHHHHHHHHTSCCS--------CCCSHHHHHHHH
T ss_pred             --HHHHHHHHHHHhc-----c---------CC---HHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHHh
Confidence              2222222211110     0         00   1123456667777888877776542        335899999987


Q ss_pred             cCCCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcC
Q 012536          237 SEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKM  316 (461)
Q Consensus       237 ~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (461)
                      ..+  ..++++++.+++..+++|| |||+.+++|++++|++||++|+|+++|+                           
T Consensus       222 ~~~--~~ls~~el~~~~~~l~~AG-eTt~~~l~~~l~~L~~~P~~~~~l~~E~---------------------------  271 (406)
T 1s1f_A          222 VGR--DEITLSEAVGLAVLLQIGG-EAVTNNSGQMFHLLLSRPELAERLRSEP---------------------------  271 (406)
T ss_dssp             HHT--TSSCHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHSHHHHHHHHHCG---------------------------
T ss_pred             hcc--cCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHCHHHHHHHHhCH---------------------------
Confidence            533  5699999999999999999 9999999999999999999999999873                           


Q ss_pred             hHHHHHHHHhhcCCCCCC--CCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCC
Q 012536          317 HYLHAALSETLRLYPAVP--VDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSES  394 (461)
Q Consensus       317 p~l~a~i~E~lRl~~~~~--~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~  394 (461)
                      .|++|||+|++|++|+++  ...|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+||||.         
T Consensus       272 ~~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~i-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~---------  340 (406)
T 1s1f_A          272 EIRPRAIDELLRWIPHRNAVGLSRIALEDVEI-KGVRIRAGDAVYVSYLAANRDPEVF-PDPDRIDFERSP---------  340 (406)
T ss_dssp             GGHHHHHHHHHHHSCCBSSCCCCEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTC-----------
T ss_pred             HHHHHHHHHHHhhCCCccccCcceEeCCCEEE-CCEEECCCCEEEeCcHHhcCCcccC-CCcceeCCCCCC---------
Confidence            268999999999999999  778888888777 9999999999999999999999999 999999999995         


Q ss_pred             CCcccccCCCCCCCCChHHHHHHHHHHHHHhccce-EEEeecCCCccceeeeEEEeeCCceeeEE
Q 012536          395 PYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFF-RFKLVDETKEATYRTMFTLHVDKGLHLYA  458 (461)
Q Consensus       395 ~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  458 (461)
                       ..++|||+|+|.|+|++||++|++++++.|+++| +++++++..++.+...........++|++
T Consensus       341 -~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~  404 (406)
T 1s1f_A          341 -NPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPEDVPFKKGALIRGPEALPVTW  404 (406)
T ss_dssp             -CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBCSSCSBCCBSCCEEEC
T ss_pred             -CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCCCccceeccCcccCCcceeEEee
Confidence             2478999999999999999999999999999999 79998753344444444455666777765


No 61 
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=100.00  E-value=3.6e-59  Score=438.56  Aligned_cols=369  Identities=15%  Similarity=0.119  Sum_probs=290.8

Q ss_pred             hhhhHHHHHHHHhcC-cEEEecCC--CCeEEecChhhHHhhhhcCccccCCChhhHHH-h-Hhh--c-cCceeeeCChhH
Q 012536            9 SRLFDYQTSLAKKYR-TFRLLQPS--CSEIFTTDPVNIEHILKTNFSNYGKGDYNWNL-M-RDL--F-GDGIFAVDGDKW   80 (461)
Q Consensus         9 ~~~~~~~~~~~~~yg-~~~~~~~~--~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~~-~-~~~--~-g~~l~~~~~~~~   80 (461)
                      ++|+.++.++++ || ++.....|  .++++|++++.++++++++ +.|++++..... . ...  . +.++++.+++.|
T Consensus        37 ~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h  114 (415)
T 3mgx_A           37 LERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLAPS-APLTSEYGMMIGFDRDHPDNSGGRMMVVSEHEQH  114 (415)
T ss_dssp             TTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSCTT-SSEECTTCSSTTCCSSSCCTTTTTSGGGCCHHHH
T ss_pred             CChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHhCh-hhhcCCccccccccccccccccCCCccccCcHHH
Confidence            589999999998 76 46664345  7899999999999999765 567765432210 0 001  1 456888999999


Q ss_pred             HHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhH-HHHHHhHhhhhhccCCCCCCCCCCCccc
Q 012536           81 RHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVL-LKSSLDSIFKVGFGVELNSLSGSDDFGN  159 (461)
Q Consensus        81 ~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~  159 (461)
                      +++|++++++|+++.++.+.+ .+++.++.+++.+.+    ++.+|+...+ ..+++++++. +||.+...       ..
T Consensus       115 ~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~ll~~l~~----~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~-------~~  181 (415)
T 3mgx_A          115 RKLRKLVGPLLSRAAARKLAE-RVRIEVGDVLGRVLD----GEVCDAATAIGPRIPAAVVCE-ILGVPAED-------ED  181 (415)
T ss_dssp             HHHHHHHGGGSSHHHHHHSHH-HHHHHHHHHTTTSSS----SSCEESTTTTTTHHHHHHHHH-HHTCCGGG-------HH
T ss_pred             HHHHHHhHhhhCHHHHHHHHH-HHHHHHHHHHHHHHh----cCCcchHHHHHHHHHHHHHHH-HcCCCHHH-------HH
Confidence            999999999999999999986 677888888876643    3479999887 6799999998 58865321       12


Q ss_pred             hHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccCC
Q 012536          160 QFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEK  239 (461)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~~  239 (461)
                      .+.+........     ..+.     +.+.    ...++...+.+++.+.++++++.        ..+|+++.|+.+.  
T Consensus       182 ~~~~~~~~~~~~-----~~~~-----~~~~----~~~~~~~~l~~~~~~~i~~rr~~--------~~~dll~~ll~~~--  237 (415)
T 3mgx_A          182 MLIDLTNHAFGG-----EDEL-----FDGM----TPRQAHTEILVYFDELITARRKE--------PGDDLVSTLVTDD--  237 (415)
T ss_dssp             HHHHHHHHHTSC-----CC---------CC----CHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHCT--
T ss_pred             HHHHHHHHHHcc-----cCcc-----cchH----HHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHhCC--
Confidence            333333222111     0000     0111    12366778888999999888764        3468999999764  


Q ss_pred             CCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcChHH
Q 012536          240 DPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYL  319 (461)
Q Consensus       240 ~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l  319 (461)
                         .++++++..++..+++||+|||+.+++|++++|++||++|+++++|+                           ||+
T Consensus       238 ---~ls~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~---------------------------~~l  287 (415)
T 3mgx_A          238 ---DLTIDDVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTALRDGS---------------------------ADV  287 (415)
T ss_dssp             ---TSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSTTHHHHHHHTS---------------------------SCH
T ss_pred             ---CCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCh---------------------------HhH
Confidence               59999999999999999999999999999999999999999999873                           689


Q ss_pred             HHHHHHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCccc
Q 012536          320 HAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFA  399 (461)
Q Consensus       320 ~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~  399 (461)
                      +|||+|+||++|+++...|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+|+||.          ..++
T Consensus       288 ~a~i~E~LRl~pp~~~~~R~~~~d~~l-~G~~Ip~G~~V~~~~~a~~rDp~~~-~dP~~F~P~R~~----------~~~l  355 (415)
T 3mgx_A          288 DTVVEEVLRWTSPAMHVLRVTTADVTI-NGRDLPSGTPVVAWLPAANRDPAEF-DDPDTFLPGRKP----------NRHI  355 (415)
T ss_dssp             HHHHHHHHHHHCCBCEEEEEESSCEEE-TTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTCCS----------CCCC
T ss_pred             HHHHHHHHHhcCcccccceecCCCeeE-CCEEECCCCEEEechHHhCCChhhc-CCccccCCCCCC----------CCCC
Confidence            999999999999999888888888777 9999999999999999999999999 999999999983          2579


Q ss_pred             ccCCCCCCCCChHHHHHHHHHHHHHhccce-EEEeecCCCccceeeeEEEeeCCceeeEEeeC
Q 012536          400 AFQAGPRICPGKEFAYRQMKILAAVLLQFF-RFKLVDETKEATYRTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       400 ~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  461 (461)
                      |||+|+|.|+|++||++|++++++.|+++| +++++++. .  ...+........++|++++|
T Consensus       356 ~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~-~--~~~~~~~~~~~~lpv~~~~R  415 (415)
T 3mgx_A          356 TFGHGMHHCLGSALARIELSVVLRVLAERVSRVDLEREP-A--WLRAIVVQGYRELPVRFTGR  415 (415)
T ss_dssp             TTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEEECSCC-E--ECSCSSBCCEEECEEEEEEC
T ss_pred             CCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCCccCCCc-c--cccCCcccCceeeeEEEecC
Confidence            999999999999999999999999999999 89987532 2  12222233345788999887


No 62 
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=100.00  E-value=2.4e-58  Score=430.72  Aligned_cols=366  Identities=15%  Similarity=0.129  Sum_probs=293.5

Q ss_pred             cchhhhhHHHHHHHHhcCc-EEEecCC----CCeEEecChhhHHhhhhcCccccCCChhhHHHh-HhhccCceeeeCChh
Q 012536            6 IHFSRLFDYQTSLAKKYRT-FRLLQPS----CSEIFTTDPVNIEHILKTNFSNYGKGDYNWNLM-RDLFGDGIFAVDGDK   79 (461)
Q Consensus         6 ~~~~~~~~~~~~~~~~yg~-~~~~~~~----~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~~~-~~~~g~~l~~~~~~~   79 (461)
                      ....+|+.++.+++ +||+ |++..++    +++++|+||+++++++++. ..|++++...... ....+.+++..+++.
T Consensus         9 ~~~~~p~~~~~~lr-~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~g~~   86 (384)
T 3oo3_A            9 RLRLDPVPEFEELQ-KAGPLHEYDTEPGMDGRKQWLVTGHDEVRAILADH-ERFSSMRPVDDEADRALLPGILQAYDPPD   86 (384)
T ss_dssp             EETTEECHHHHHHH-HTCSEECCCCC------CEEEECCHHHHHHHHHCT-TTEECSCCCC-----CCCTTCGGGCCTTH
T ss_pred             ccccChhHHHHHHH-hcCCeeecccccccCCCCEEEEcCHHHHHHHHhCc-hhccCCccccccccccccccccccCCChh
Confidence            34679999999995 8985 6666665    8999999999999999665 6888876543211 122345678889999


Q ss_pred             HHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHHHHHHhHhhhhhccCCCCCCCCCCCccc
Q 012536           80 WRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGN  159 (461)
Q Consensus        80 ~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~  159 (461)
                      |+++|++++++|++++++.+.+ .+++.++.+++.+.+   .++++|+...+...+.+.+...+||.+.+..       .
T Consensus        87 ~~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~~-------~  155 (384)
T 3oo3_A           87 HTRLRRTVAPAYSARRMERLRP-RIEEIVEECLDDFES---VGAPVDFVRHAAWPIPAYIACEFLGVPRDDQ-------A  155 (384)
T ss_dssp             HHHHHHHHGGGGCHHHHHHHHH-HHHHHHHHHHHHHHH---SCSSEEHHHHTTTHHHHHHHHHHHTCCGGGH-------H
T ss_pred             HHHHHHHHHHhhCHHHHHHHHH-HHHHHHHHHHHHHHh---cCCCccHHHHHHHHHHHHHHHHHcCCCHHHH-------H
Confidence            9999999999999999999986 778899999998864   4568999999999888888888999775321       2


Q ss_pred             hHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccCC
Q 012536          160 QFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEK  239 (461)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~~  239 (461)
                      ++.+.+.....                  ....+...++...+.+++.+.++++++.        ...|+++.|+.+.  
T Consensus       156 ~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~i~~~~~~--------~~~d~l~~ll~~~--  207 (384)
T 3oo3_A          156 ELSRMIRESRE------------------SRLPRQRTLSGLGIVNYTKRLTSGKRRD--------PGDGMIGVIVREH--  207 (384)
T ss_dssp             HHHHHHHHHHH------------------CSCHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHHH--
T ss_pred             HHHHHHHHHhc------------------cCChHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHHhc--
Confidence            23322222111                  1233456677888888999998887653        3469999999862  


Q ss_pred             CCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcChHH
Q 012536          240 DPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYL  319 (461)
Q Consensus       240 ~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l  319 (461)
                       +..++++++.+++..+++||+|||+.+++|++++|++||++|+++++|++.                           |
T Consensus       208 -~~~l~~~~l~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~~l~~E~~~---------------------------l  259 (384)
T 3oo3_A          208 -GAEISDEELAGLAEGNLIMAAEQMAAQLAVAVLLLVTHPDQMALLREKPEL---------------------------I  259 (384)
T ss_dssp             -GGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCGGG---------------------------H
T ss_pred             -CCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHHH---------------------------H
Confidence             245999999999999999999999999999999999999999999998542                           8


Q ss_pred             HHHHHHhhcCCCCCCC-CCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCcc
Q 012536          320 HAALSETLRLYPAVPV-DGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKF  398 (461)
Q Consensus       320 ~a~i~E~lRl~~~~~~-~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~  398 (461)
                      +|||+|++|++|+++. ..|.+.+|.++ +||.||||+.|.++.+++||      +||++|+||||          ...+
T Consensus       260 ~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~g~~Ip~Gt~V~~~~~~~~r------~dp~~F~PeR~----------~~~~  322 (384)
T 3oo3_A          260 DSATEEVLRHASIVEAPAPRVALADVRM-AGRDIHAGDVLTCSMLATNR------APGDRFDITRE----------KATH  322 (384)
T ss_dssp             HHHHHHHHHHHCSCSCCSCEEESSCEEE-TTEEECTTCEEEECHHHHHC------CTTCCCCTTCS----------CCCC
T ss_pred             HHHHHHHHHhCCcccCCcceeeCCCEEE-CCEEECCCCEEEEehhhcCC------CCcceeCCCCC----------CCCc
Confidence            9999999999999986 67888888777 99999999999999999999      89999999996          2468


Q ss_pred             cccCCCCCCCCChHHHHHHHHHHHHHhccce-EEEeecCCCccceee-eEEEeeCCceeeE
Q 012536          399 AAFQAGPRICPGKEFAYRQMKILAAVLLQFF-RFKLVDETKEATYRT-MFTLHVDKGLHLY  457 (461)
Q Consensus       399 ~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  457 (461)
                      +|||+|+|.|+|++||.+|++++++.|+++| +|++++++.++.+.. .........++|+
T Consensus       323 ~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~~lpv~  383 (384)
T 3oo3_A          323 MAFGHGIHHCIGAPLARLQLRVALPAVVGRFPSLRLAVPEEDLRFKPGRPAPFAVEELPLE  383 (384)
T ss_dssp             CTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCEECSSSSCCEESCCEEE
T ss_pred             CCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCCeeCCCCccceeecccccccCcceeeee
Confidence            9999999999999999999999999999999 999987655555554 4444445566654


No 63 
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=100.00  E-value=1.5e-58  Score=433.84  Aligned_cols=349  Identities=18%  Similarity=0.188  Sum_probs=283.5

Q ss_pred             hhhhhHHHHHHHHhcCc-EEEecCCCCeEEecChhhHHhhhhcCccccCCChhhH-HHhHhhccCceeeeCChhHHHHHh
Q 012536            8 FSRLFDYQTSLAKKYRT-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNW-NLMRDLFGDGIFAVDGDKWRHQRK   85 (461)
Q Consensus         8 ~~~~~~~~~~~~~~yg~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~-~~~~~~~g~~l~~~~~~~~~~~R~   85 (461)
                      ..+|+.++.+|+++ |+ |++..+ .+.++|+||+.++++++++ +.|++++... .......+.++++.+++.|+++|+
T Consensus        23 ~~~p~~~~~~l~~~-Gpv~~~~~~-~~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~g~~h~~~R~   99 (396)
T 3oft_A           23 EQDYFAAWKTLLDG-PGLVWSTAN-GGHWIAARGDVVRELWGDA-ERLSSQCLAVTPGLGKVMQFIPLQQDGAEHKAFRT   99 (396)
T ss_dssp             TTCHHHHHHGGGGS-CSEEEECST-TSEEEECSHHHHHHHHHCT-TTEESTTCCSSTTHHHHHCCTTTTCCHHHHHHHHH
T ss_pred             hcChHHHHHHHHhc-CCeeeecCC-CCEEEEcCHHHHHHHHcCc-ccccCCcccCCCccccccccCccccCCcHHHHHHH
Confidence            56899999999999 75 666555 4589999999999999876 6787765321 112222345778899999999999


Q ss_pred             hhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhH-HHHHHhHhhhhhccCCCCCCCCCCCccchHHHH
Q 012536           86 LASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVL-LKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKA  164 (461)
Q Consensus        86 ~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~  164 (461)
                      +++++|++++++.+.+ .+++.++.+++.+.+    ++.+|+...+ ..++.++++. +||.+...       ...+.+.
T Consensus       100 ~~~~~f~~~~l~~~~~-~i~~~~~~l~~~l~~----~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~-------~~~~~~~  166 (396)
T 3oft_A          100 PVMKGLASRFVVALEP-KVQAVARKLMESLRP----RGSCDFVSDFAEILPLNIFLT-LIDVPLED-------RPRLRQL  166 (396)
T ss_dssp             HHHHHTCHHHHHHHHH-HHHHHHHHHHHHHGG----GSEEEHHHHTTTTHHHHHHHH-HTTCCGGG-------HHHHHHH
T ss_pred             HhhhhhCHHHHHHHHH-HHHHHHHHHHHHhhh----cCCccHHHHHHHHHHHHHHHH-HcCCCHHH-------HHHHHHH
Confidence            9999999999999986 778888999988754    2368887655 5577777766 67865421       1222222


Q ss_pred             hhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccCCCCCCC
Q 012536          165 FDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEKDPESM  244 (461)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~l  244 (461)
                      +....                  .....+...++.+.+.+++.+.++++++.        ...|+++.|+.+.. ++..+
T Consensus       167 ~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~ll~~~~-~~~~l  219 (396)
T 3oft_A          167 GVQLT------------------RPDGSMTVEQLKQAADDYLWPFIEKRMAQ--------PGDDLFSRILSEPV-GGRPW  219 (396)
T ss_dssp             HHHHH------------------SCCSSCCHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHTSCB-TTBCC
T ss_pred             HHHHh------------------CCCCHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHHhhc-cCCCC
Confidence            11111                  01112345677888899999999988775        34699999998754 34569


Q ss_pred             CHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcChHHHHHHH
Q 012536          245 TDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLHAALS  324 (461)
Q Consensus       245 ~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~  324 (461)
                      +++++++++..+++||+|||+.+++|++++|++||++|+++++|++                           |++|||+
T Consensus       220 ~~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~---------------------------~l~a~i~  272 (396)
T 3oft_A          220 TVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPD---------------------------LIPAAAD  272 (396)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------------------GHHHHHH
T ss_pred             CHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------------------hHHHHHH
Confidence            9999999999999999999999999999999999999999998843                           6899999


Q ss_pred             HhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCcccccCCC
Q 012536          325 ETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAG  404 (461)
Q Consensus       325 E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~~Fg~G  404 (461)
                      |++|++|++ ...|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+|+||+.        +..++|||+|
T Consensus       273 E~lRl~p~~-~~~R~~~~d~~~-~g~~Ip~G~~V~~~~~~~~rdp~~~-~dp~~F~PeR~~~--------~~~~~~FG~G  341 (396)
T 3oft_A          273 ELMRRYPTV-AVSRNAVADVDA-DGVTIRKGDLVYLPSVLHNLDPASF-EAPEEVRFDRGLA--------PIRHTTMGVG  341 (396)
T ss_dssp             HHHHHCCCB-EEEEEESSCEEE-TTEEECTTCEEEEETHHHHTCTTTS-SSTTSCCSCCCCC--------GGGSSTTCCG
T ss_pred             HHHHhcCcc-cCceecCCCEEE-CCEEECCCCEEEeChHHhCCCcccC-CCcCccCCCCCCC--------CCCcccCCCC
Confidence            999999999 778888888777 9999999999999999999999999 9999999999974        4578999999


Q ss_pred             CCCCCChHHHHHHHHHHHHHhccce-EEEeecCC
Q 012536          405 PRICPGKEFAYRQMKILAAVLLQFF-RFKLVDET  437 (461)
Q Consensus       405 ~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~  437 (461)
                      +|.|+|++||++|++++++.|+++| ++++++++
T Consensus       342 ~r~C~G~~lA~~e~~~~l~~ll~~~~~~~l~~~~  375 (396)
T 3oft_A          342 AHRCVGAGLARMEVIVFLREWLGGMPEFALAPDK  375 (396)
T ss_dssp             GGCCTTHHHHHHHHHHHHHHHHHHSCCEEECSSS
T ss_pred             CccCcCHHHHHHHHHHHHHHHHHhCCCceECCCC
Confidence            9999999999999999999999999 99998654


No 64 
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=100.00  E-value=4.9e-59  Score=441.08  Aligned_cols=371  Identities=15%  Similarity=0.137  Sum_probs=286.9

Q ss_pred             hhhhHHHHHHHHhcCc-EEEe--------cCCCCeEEecChhhHHhhhhcCccccCCChhhHHH---------hHhhccC
Q 012536            9 SRLFDYQTSLAKKYRT-FRLL--------QPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWNL---------MRDLFGD   70 (461)
Q Consensus         9 ~~~~~~~~~~~~~yg~-~~~~--------~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~~---------~~~~~g~   70 (461)
                      ++|+.++.++ ++||+ |.+.        +|+.++++|+||+.++++++++ ..|++++.....         .....+.
T Consensus        37 ~~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~~~~  114 (433)
T 3ivy_A           37 RLPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHS-DVFSSYENGVIPRFKNDIAREDIEVQRF  114 (433)
T ss_dssp             CCCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCT-TTEESTTTCSCCCCCTTCCHHHHHGGGG
T ss_pred             CCccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcCh-hhccCCcccccccccccccccccccccC
Confidence            4699999999 67875 7776        3447899999999999999876 667765432100         1123356


Q ss_pred             ceeeeCChhHHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhH-HHHHHhHhhhhhccCCCC
Q 012536           71 GIFAVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVL-LKSSLDSIFKVGFGVELN  149 (461)
Q Consensus        71 ~l~~~~~~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~  149 (461)
                      ++++.+++.|+++|++++++|+++.++.+.+ .+++.++.+++.+..    ++.+|+...+ ..+++++++.+ ||.+..
T Consensus       115 ~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~ll~~l~~----~~~~d~~~~~~~~~~~~vi~~l-~G~~~~  188 (433)
T 3ivy_A          115 VMLNMDAPHHTRLRKIISRGFTPRAVGRLHD-ELQERAQKIAAEAAA----AGSGDFVEQVSCELPLQAIAGL-LGVPQE  188 (433)
T ss_dssp             SGGGCCTTHHHHHHHHHGGGSCHHHHHTTHH-HHHHHHHHHHHHHHH----HCEEEHHHHTTSHHHHHHHHHH-HTCCHH
T ss_pred             CccccChHHHHHHHHHHHHhhCHHHHHHHHH-HHHHHHHHHHHHHhh----CCCeeHHHHHHHHHHHHHHHHH-cCCCHH
Confidence            7889999999999999999999999999986 778899999988863    2469999888 99999999996 885431


Q ss_pred             CCCCCCCccchHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhH
Q 012536          150 SLSGSDDFGNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDI  229 (461)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  229 (461)
                      .       ...+.+.......     ...+.         .......++...+.+++.+.++++++.        ..+|+
T Consensus       189 ~-------~~~~~~~~~~~~~-----~~~p~---------~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~dl  239 (433)
T 3ivy_A          189 D-------RGKLFHWSNEMTG-----NEDPE---------YAHIDPKASSAELIGYAMKMAEEKAKN--------PADDI  239 (433)
T ss_dssp             H-------HHHHHHHHTTCSC-----CCCGG---------GTTCCHHHHHHHHHHHHHHHHHHC---------------C
T ss_pred             H-------HHHHHHHHHHHhc-----cCCch---------hhhHHHHHHHHHHHHHHHHHHHHHhcC--------CCCcH
Confidence            1       1223322222211     00010         000134567778888888888887653        34689


Q ss_pred             HHHHhhccCCCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhccc
Q 012536          230 LSRFLLESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVT  309 (461)
Q Consensus       230 l~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~  309 (461)
                      ++.|+.+.. ++..++++++.+++..+++||+|||+.+++|++++|++||++|+++++|++                   
T Consensus       240 l~~ll~~~~-~~~~ls~~ei~~~~~~ll~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~-------------------  299 (433)
T 3ivy_A          240 VTQLIQADI-DGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKVRP-------------------  299 (433)
T ss_dssp             HHHHHSCC---CCCCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHHCC-------------------
T ss_pred             HHHHHhhhc-CCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCcc-------------------
Confidence            999998754 345699999999999999999999999999999999999999999999943                   


Q ss_pred             HHHhhcChHHHHHHHHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCc
Q 012536          310 EAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGV  389 (461)
Q Consensus       310 ~~~l~~lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~  389 (461)
                                +|||+|+||++|+++...|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+|+||.    
T Consensus       300 ----------~a~i~E~LRl~p~~~~~~R~~~~d~~l-~G~~Ip~G~~V~~~~~~~~rdp~~f-~dp~~F~p~R~~----  363 (433)
T 3ivy_A          300 ----------ETAADEIVRWATPVTAFQRTALRDYEL-SGVQIKKGQRVVMFYRSANFDEEVF-QDPFTFNILRNP----  363 (433)
T ss_dssp             ----------TTHHHHHHHHHCSBCEEEEEESSCEEE-TTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTCCS----
T ss_pred             ----------cchhHHHhhhCcchhceeeEECCCEEE-CCEEECCCCEEEEChhhhcCCchhC-CCcCccCCCCCC----
Confidence                      579999999999999888888888777 9999999999999999999999999 999999999993    


Q ss_pred             cCCCCCCcccccC-CCCCCCCChHHHHHHHHHHHHHhccceE-EEeecCCCccceeeeEEEeeCCceeeEEeeC
Q 012536          390 FRSESPYKFAAFQ-AGPRICPGKEFAYRQMKILAAVLLQFFR-FKLVDETKEATYRTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       390 ~~~~~~~~~~~Fg-~G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  461 (461)
                            ..++||| +|+|.|+|++||.+|++++++.|+++|+ |+++++. ..  ...........++|++++|
T Consensus       364 ------~~~l~FGg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~-~~--~~~~~~~g~~~lpv~~~~R  428 (433)
T 3ivy_A          364 ------NPHVGFGGTGAHYCIGANLARMTINLIFNAVADHMPDLKPISAP-ER--LRSGWLNGIKHWQVDYTGR  428 (433)
T ss_dssp             ------CCCCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCC-EE--CCCSSBCCEEECEEESCC-
T ss_pred             ------CCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCccEECCCC-ce--eccCcccCcceeEEEEecc
Confidence                  2579999 9999999999999999999999999999 9997542 11  1111122223677887776


No 65 
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=100.00  E-value=3.4e-58  Score=434.66  Aligned_cols=379  Identities=18%  Similarity=0.203  Sum_probs=293.0

Q ss_pred             chhhhhHHHHHHHHhcCc-EEEecCCCCeEEecChhhHHhhhhcCccccCCChhhH---HHh------HhhccCceeeeC
Q 012536            7 HFSRLFDYQTSLAKKYRT-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNW---NLM------RDLFGDGIFAVD   76 (461)
Q Consensus         7 ~~~~~~~~~~~~~~~yg~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~---~~~------~~~~g~~l~~~~   76 (461)
                      ..++|+.++.+++ +||+ |+... |  +++|+||+.++++++++ ..++.++...   ...      ....+.++++.+
T Consensus        27 ~~~~p~~~~~~lr-~~gpv~~~~~-g--~~vv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d  101 (418)
T 3r9b_A           27 TRADPYPIYDRIR-RGGPLALPEA-N--LAVFSSFSDCDDVLRHP-SSCSDRTKSTIFQRQLAAETQPRPQGPASFLFLD  101 (418)
T ss_dssp             GTTCCHHHHHHHH-HHCCEEEGGG-T--EEEECSHHHHHHHHHCT-TEECCGGGCHHHHHHHC---------CCCGGGCC
T ss_pred             hccCchHHHHHHH-hcCCEEECCC-C--eEEEecHHHHHHHHcCc-ccccCcccccccccccccccccccccccchhhcC
Confidence            3568999999995 6775 55444 3  89999999999999875 4444443221   111      112356788999


Q ss_pred             ChhHHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHh-HHHHHHhHhhhhhccCCCCCCCCCC
Q 012536           77 GDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDV-LLKSSLDSIFKVGFGVELNSLSGSD  155 (461)
Q Consensus        77 ~~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~-~~~~~~~~i~~~~fG~~~~~~~~~~  155 (461)
                      ++.|+++|++++++|++++++.+.+ .+++.++.+++ +.    +++.+|+... ...+++++++. +||.+....    
T Consensus       102 g~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~ll~-l~----~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~----  170 (418)
T 3r9b_A          102 PPDHTRLRGLVSKAFAPRVIKRLEP-EITALVDQLLD-AV----DGPEFNLIDNLAYPLPVAVICR-LLGVPIEDE----  170 (418)
T ss_dssp             TTHHHHHHHHHHGGGSHHHHGGGHH-HHHHHHHHHHH-TC----CSSEEEHHHHTTTHHHHHHHHH-HHTCCGGGH----
T ss_pred             CchHHHHHHHhhhhhCHHHHHHHHH-HHHHHHHHHHh-hh----ccCCeehHHHHhCcCCHHHHHH-HcCCCHHHH----
Confidence            9999999999999999999999986 67888888888 63    2348998655 46899999999 899776421    


Q ss_pred             CccchHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhh
Q 012536          156 DFGNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLL  235 (461)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~  235 (461)
                         ..+.+.......     ...+++.+ ..++....+...++...+.+++.+.++++++.        ..+|+++.|+.
T Consensus       171 ---~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~--------~~~d~l~~ll~  233 (418)
T 3r9b_A          171 ---PKFSRASALLAA-----ALDPFLAL-TGETSDLFDEQMKAGMWLRDYLRALIDERRRT--------PGEDLMSGLVA  233 (418)
T ss_dssp             ---HHHHHHHHHHHH-----TTSCHHHH-HSSCCTTHHHHHHHHHHHHHHHHHHHHHTTTS--------CCSSHHHHHHH
T ss_pred             ---HHHHHHHHHHHh-----hcCccccc-cccCHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCccHHHHHHH
Confidence               222222222111     11111111 12233445667788888899999988887653        34689999997


Q ss_pred             ccCCCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhc
Q 012536          236 ESEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEK  315 (461)
Q Consensus       236 ~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (461)
                      +.+ ++..++++++.+++..+++||+|||+.+++|++++|++||++|+++++|++                         
T Consensus       234 ~~~-~~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~~-------------------------  287 (418)
T 3r9b_A          234 VEE-SGDQLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAADGS-------------------------  287 (418)
T ss_dssp             HHH-HSSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHCGG-------------------------
T ss_pred             hhh-ccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH-------------------------
Confidence            742 234699999999999999999999999999999999999999999998732                         


Q ss_pred             ChHHHHHHHHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCC
Q 012536          316 MHYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESP  395 (461)
Q Consensus       316 lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~  395 (461)
                        |++|||+|++|++|+++...|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+|+|+          .
T Consensus       288 --~l~a~i~E~lRl~p~~~~~~R~~~~d~~l-~g~~Ip~G~~V~~~~~~~~rdp~~~-~dp~~F~p~R~----------~  353 (418)
T 3r9b_A          288 --RASAVIEETMRYDPPVQLVSRYAGDDLTI-GTHTVPKGDTMLLLLAAAHRDPTIV-GAPDRFDPDRA----------Q  353 (418)
T ss_dssp             --GHHHHHHHHHHHSCSBCCEEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCS----------C
T ss_pred             --hHHHHHHHHHHhCCccccceeEeCCCeEE-CCEEECCCCEEEEChHHhcCCcccC-CCcCcCCCCCC----------C
Confidence              68999999999999999988888888777 9999999999999999999999999 99999999993          2


Q ss_pred             CcccccCCCCCCCCChHHHHHHHHHHHHHhccce-EEEeecCCCccceeeeEEEeeCCceeeEEeeC
Q 012536          396 YKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFF-RFKLVDETKEATYRTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       396 ~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  461 (461)
                      ..++|||+|+|.|+|++||++|++++++.|+++| +++++++   +.+..+..+.+...++|++++|
T Consensus       354 ~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~---~~~~~~~~~~~~~~lpv~~~~r  417 (418)
T 3r9b_A          354 IRHLGFGKGAHFCLGAPLARLEATVALPALAARFPEARLSGE---PEYKRNLTLRGMSTLSIAVHHH  417 (418)
T ss_dssp             CCCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSC---CEECSCSSBCCEEECEEEC---
T ss_pred             CCCcCCCCcCccCccHHHHHHHHHHHHHHHHHhCccceeCCC---CccccCCcccCcceeEEEecCC
Confidence            3579999999999999999999999999999999 7999763   3333444455666788888876


No 66 
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=100.00  E-value=2e-57  Score=428.55  Aligned_cols=376  Identities=18%  Similarity=0.146  Sum_probs=291.7

Q ss_pred             hhhhHHHHHHHHhcCcEEEec-CCCCeEEecChhhHHhhhhcCccccCCChhhH-----H-----HhHhhccCceeeeCC
Q 012536            9 SRLFDYQTSLAKKYRTFRLLQ-PSCSEIFTTDPVNIEHILKTNFSNYGKGDYNW-----N-----LMRDLFGDGIFAVDG   77 (461)
Q Consensus         9 ~~~~~~~~~~~~~yg~~~~~~-~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~-----~-----~~~~~~g~~l~~~~~   77 (461)
                      ++|+.++.+++++.+++.... ++.++++|++++.++++++++ ..|++.+...     .     ......+.+++..++
T Consensus        38 ~~p~~~~~~lr~~gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg  116 (426)
T 3rwl_A           38 DSVGEYFKRLRKDDPVHYCADSAFGPYWSITKYNDIMHVDTNH-DIFSSDAGYGGIIIDDGIQKGGDGGLDLPNFIAMDR  116 (426)
T ss_dssp             TCHHHHHHHHHHHCSEEEESCCTTCSEEEECSHHHHHHHHHCT-TTEECCGGGTCSSSSCCC-------CCCCCGGGCCT
T ss_pred             CCccHHHHHHHhcCCeeeccCCCCCCEEEEcCHHHHHHHHcCC-cccccccccCCCCcccccccccccccccCcccccCc
Confidence            469999999998744566665 467799999999999999987 5677654210     0     111223456888999


Q ss_pred             hhHHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhH-HHHHHhHhhhhhccCCCCCCCCCCC
Q 012536           78 DKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVL-LKSSLDSIFKVGFGVELNSLSGSDD  156 (461)
Q Consensus        78 ~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~  156 (461)
                      +.|+++|++++++|+++.++.+.+ .+++.++.+++.+    ..++++|+...+ ..++.++++. +||.+....     
T Consensus       117 ~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~~~~ll~~l----~~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~-----  185 (426)
T 3rwl_A          117 PRHDEQRKAVSPIVAPANLAALEG-TIRERVSKTLDGL----PVGEEFDWVDRVSIEITTQMLAT-LFDFPFEER-----  185 (426)
T ss_dssp             THHHHHHHHHGGGGCHHHHHHHHH-HHHHHHHHHHHTS----CSSSCEEHHHHTHHHHHHHHHHH-HHTCCGGGT-----
T ss_pred             hHHHHHHHHhhhhhCHHHHHHHHH-HHHHHHHHHHHHh----hcCCCcchHHHHHHHHHHHHHHH-HcCCCHHHH-----
Confidence            999999999999999999999885 6778888888766    345689988777 6788888886 899754321     


Q ss_pred             ccchHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhc
Q 012536          157 FGNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLE  236 (461)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~  236 (461)
                        ..+.........     .       .........+...++...+.+++.+.++++...       +..+|+++.|+.+
T Consensus       186 --~~~~~~~~~~~~-----~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~~dll~~ll~~  244 (426)
T 3rwl_A          186 --RKLTRWSDVTTA-----A-------PGGGVVESWDQRKTELLECAAYFQVLWNERVNK-------DPGNDLISMLAHS  244 (426)
T ss_dssp             --HHHHHHHHHHTC-----C-------TTSSSCSSHHHHHHHHHHHHHHHHHHHHHHHTS-------CCCSSHHHHHHHC
T ss_pred             --HHHHHHHHHHHh-----c-------cCccccccHHHHHHHHHHHHHHHHHHHHHHhhc-------CCCCCHHHHHHhc
Confidence              222221111100     0       000011223445567788888999888887322       1457999999987


Q ss_pred             cCCCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcC
Q 012536          237 SEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKM  316 (461)
Q Consensus       237 ~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (461)
                      ..+  +.++++++++++..+++||+|||+.+++|++++|++||++|++|++|+                           
T Consensus       245 ~~~--~~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~E~---------------------------  295 (426)
T 3rwl_A          245 PAT--RNMTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKANP---------------------------  295 (426)
T ss_dssp             GGG--GGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG---------------------------
T ss_pred             ccC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCh---------------------------
Confidence            543  358999999999999999999999999999999999999999999772                           


Q ss_pred             hHHHHHHHHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCC
Q 012536          317 HYLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPY  396 (461)
Q Consensus       317 p~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~  396 (461)
                      +|++|||+|+||++|+++...|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+|+||..         .
T Consensus       296 ~~l~a~i~E~LRl~p~~~~~~R~~~~d~~l-~G~~Ip~G~~V~~~~~~~~rDp~~f-~dP~~F~p~R~~~---------~  364 (426)
T 3rwl_A          296 ALVETMVPEIIRWQTPLAHMRRTAIADSEL-GGKTIRKGDKVVMWYYSGNRDDEVI-DRPEEFIIDRPRP---------R  364 (426)
T ss_dssp             GGHHHHHHHHHHHHCSBCCEEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCSCT---------T
T ss_pred             HhHHHHHHHHHHhcCccccCceecCCCeEE-CCEEECCCCEEEechHHhCCCcccc-CCcCccCCCCCCC---------C
Confidence            479999999999999999988888888877 9999999999999999999999999 9999999999952         4


Q ss_pred             cccccCCCCCCCCChHHHHHHHHHHHHHhccce-EEEeecCCCccceeeeEEEeeCCceeeEEee
Q 012536          397 KFAAFQAGPRICPGKEFAYRQMKILAAVLLQFF-RFKLVDETKEATYRTMFTLHVDKGLHLYAYP  460 (461)
Q Consensus       397 ~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  460 (461)
                      .++|||+|+|.|+|++||.+|++++++.|+++| +++++++. +  ............++|+++|
T Consensus       365 ~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~-~--~~~~~~~~g~~~lpv~~~P  426 (426)
T 3rwl_A          365 QHLSFGFGIHRCVGNRLAEMQLRILWEEILTRFSRIEVMAEP-E--RVRSNFVRGYAKMMVRVHA  426 (426)
T ss_dssp             CCSTTCCSTTSCSSHHHHHHHHHHHHHHHHTTCSEEEECSCC-E--ECCCSSBCCEEECEEEEEC
T ss_pred             CccCCCCCCcCCccHHHHHHHHHHHHHHHHHhCccCeeCCCC-c--ccccccccCcceeeEEEeC
Confidence            689999999999999999999999999999999 99997542 2  2222223334467888765


No 67 
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=100.00  E-value=2.6e-58  Score=431.22  Aligned_cols=368  Identities=15%  Similarity=0.153  Sum_probs=285.4

Q ss_pred             chhhhhHHHHHHHHhcCc-EEEec-CCCCeEEecChhhHHhhhhcCccccC-C-Chhh--HHH----hHhhccCceeeeC
Q 012536            7 HFSRLFDYQTSLAKKYRT-FRLLQ-PSCSEIFTTDPVNIEHILKTNFSNYG-K-GDYN--WNL----MRDLFGDGIFAVD   76 (461)
Q Consensus         7 ~~~~~~~~~~~~~~~yg~-~~~~~-~~~~~v~v~dp~~~~~il~~~~~~f~-~-~~~~--~~~----~~~~~g~~l~~~~   76 (461)
                      ...+++.++.+| ++||+ |++.+ ++.++++|+||+++++++.++  .|+ + ++..  ...    +....+.++++. 
T Consensus        14 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-   89 (396)
T 1n40_A           14 RGDRIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDR--RFSMKETAAAGAPRLNALTVPPEVVNNMGNI-   89 (396)
T ss_dssp             CSSSCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEESGGGGSTTCCCSSCCSSCGGGGGHHHHH-
T ss_pred             cccCccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCC--CcccccCccccccccccccCCchhhhhhhhH-
Confidence            456899999999 99985 77776 688999999999999999975  366 4 4321  101    112234556555 


Q ss_pred             ChhHHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHH-HHHHhHhhhhhccCCCCCCCCCC
Q 012536           77 GDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLL-KSSLDSIFKVGFGVELNSLSGSD  155 (461)
Q Consensus        77 ~~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~-~~~~~~i~~~~fG~~~~~~~~~~  155 (461)
                        .|+++|+++++.|+++ ++.+.+ .+++.++.+++.+..  . ++++|+...+. .+++++++. +||.+.+.     
T Consensus        90 --~h~~~R~~~~~~fs~~-~~~~~~-~i~~~~~~l~~~l~~--~-~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-----  156 (396)
T 1n40_A           90 --ADAGLRKAVMKAITPK-APGLEQ-FLRDTANSLLDNLIT--E-GAPADLRNDFADPLATALHCK-VLGIPQED-----  156 (396)
T ss_dssp             --HHTTCHHHHHHHTSSC-STTHHH-HHHHHHHHHHHHHHH--H-CSCEETTTTTHHHHHHHHHHH-HHTCCGGG-----
T ss_pred             --HHHHHHHHHHHhhChH-HHHhHH-HHHHHHHHHHHHHHh--c-CCCccHHHHHHHHhHHHHHHH-HhCCChhh-----
Confidence              9999999999999999 998885 778899999998864  1 56899986664 899999998 89987531     


Q ss_pred             CccchHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhh
Q 012536          156 DFGNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLL  235 (461)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~  235 (461)
                        ..++.+.+.......     .       ..   ..++..++...+ +++.+.++      +.    ....|+++.|+.
T Consensus       157 --~~~~~~~~~~~~~~~-----~-------~~---p~~~~~~~~~~~-~~~~~~i~------~~----~~~~dll~~ll~  208 (396)
T 1n40_A          157 --GPKLFRSLSIAFMSS-----A-------DP---IPAAKINWDRDI-EYMAGILE------NP----NITTGLMGELSR  208 (396)
T ss_dssp             --HHHHHHTHHHHTBCC-----S-------SC---CHHHHHHHHHHH-HHHHHHHH------CT----TCCSHHHHHHHH
T ss_pred             --HHHHHHHHHHHhccc-----c-------CC---CHHHHHHHHHHH-HHHHHHHh------CC----CCCCCHHHHHHH
Confidence              123333222221100     0       00   113445556666 77776666      11    123689999998


Q ss_pred             ccCC-CCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhh
Q 012536          236 ESEK-DPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALE  314 (461)
Q Consensus       236 ~~~~-~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~  314 (461)
                      +... ++..++++++.+++..+++||+|||+.+++|++++|++||++|+++++|+                         
T Consensus       209 ~~~~~~~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~-------------------------  263 (396)
T 1n40_A          209 LRKDPAYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKP-------------------------  263 (396)
T ss_dssp             HHTSGGGTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG-------------------------
T ss_pred             hhcccccCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcChHHHHHHHhCH-------------------------
Confidence            7522 34569999999999999999999999999999999999999999999873                         


Q ss_pred             cChHHHHHHHHhhcCCCCCC-CCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCC
Q 012536          315 KMHYLHAALSETLRLYPAVP-VDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSE  393 (461)
Q Consensus       315 ~lp~l~a~i~E~lRl~~~~~-~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~  393 (461)
                        .||+|||+|++|++|+++ ..+|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+||||.+       
T Consensus       264 --~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~~-------  332 (396)
T 1n40_A          264 --ELIPAGVEELLRINLSFADGLPRLATADIQV-GDVLVRKGELVLVLLEGANFDPEHF-PNPGSIELDRPNP-------  332 (396)
T ss_dssp             --GGHHHHHHHHHHTCCCBCSCEEEEESSCEEE-TTEEECTTCEEEECHHHHHTCTTTS-SSTTSCCTTCSST-------
T ss_pred             --HHHHHHHHHHHhhCCCcccccceecCCCeeE-CCEEECCCCEEEechHHhhCChhhC-CChhhCCCCCCCC-------
Confidence              269999999999999999 678888888777 9999999999999999999999999 9999999999962       


Q ss_pred             CCCcccccCCCCCCCCChHHHHHHHHHHHHHhccce-EEEeecCCCccceeeeEEEeeCCceeeE
Q 012536          394 SPYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFF-RFKLVDETKEATYRTMFTLHVDKGLHLY  457 (461)
Q Consensus       394 ~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  457 (461)
                        ..++|||+|+|.|+|++||++|++++++.|+++| ++++++++.++.+..........+++|+
T Consensus       333 --~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~  395 (396)
T 1n40_A          333 --TSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLAVPIDQLVWRTRFQRRIPERLPVL  395 (396)
T ss_dssp             --TCSSTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCSBSBCCBSCCEEE
T ss_pred             --CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCccccccCCccccccccccccCCcceeeee
Confidence              3589999999999999999999999999999999 5999765334444444445555666665


No 68 
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=100.00  E-value=1.7e-56  Score=415.05  Aligned_cols=354  Identities=17%  Similarity=0.221  Sum_probs=276.6

Q ss_pred             hhHHHHHHHHhcCcEEEecCCCCeEEecChhhHHhhhhcCccccCCChh-----hHHHh-Hh--h---ccCceeeeCChh
Q 012536           11 LFDYQTSLAKKYRTFRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDY-----NWNLM-RD--L---FGDGIFAVDGDK   79 (461)
Q Consensus        11 ~~~~~~~~~~~yg~~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~-----~~~~~-~~--~---~g~~l~~~~~~~   79 (461)
                      |+.++.+++ +||++...  | +.++++||+++++++.++ +.|++++.     +.... ..  +   .|.++++.+++.
T Consensus         1 p~~~~~~lr-~~Gpv~~~--g-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~   75 (368)
T 1io7_A            1 MYDWFSEMR-KKDPVYYD--G-NIWQVFSYRYTKEVLNNF-SKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSDPPL   75 (368)
T ss_dssp             CHHHHHHHH-HHCSEEEC--S-SCEEECSHHHHHHHHHCT-TTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGCCTTH
T ss_pred             CCHHHHHHH-hcCCeEeE--C-CEEEEecHHHHHHHHcCc-ccccccccccccccccccccccccccccccccccCCChH
Confidence            577888885 78864333  3 589999999999999986 57887753     21110 11  1   226788899999


Q ss_pred             HHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhH-HHHHHhHhhhhhccCCCCCCCCCCCcc
Q 012536           80 WRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVL-LKSSLDSIFKVGFGVELNSLSGSDDFG  158 (461)
Q Consensus        80 ~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~  158 (461)
                      |+++|++++++|++++++.+.+ .+++.++.+++.+ .   . +++|+...+ ..+++++++.+ ||.+.+..       
T Consensus        76 h~~~R~~~~~~f~~~~~~~~~~-~i~~~~~~l~~~l-~---~-g~~d~~~~~~~~~~~~vi~~~-~G~~~~~~-------  141 (368)
T 1io7_A           76 HDELRSMSADIFSPQKLQTLET-FIRETTRSLLDSI-D---P-REDDIVKKLAVPLPIIVISKI-LGLPIEDK-------  141 (368)
T ss_dssp             HHHHHGGGTTTTCHHHHHHHHH-HHHHHHHHHHHTC-C---T-TSEEHHHHTTTHHHHHHHHHH-HTCCGGGH-------
T ss_pred             HHHHHHHHHhhcCHHHHHHHHH-HHHHHHHHHHHHh-h---c-CCccHHHHHHHHHHHHHHHHH-hCCCHHHH-------
Confidence            9999999999999999999886 7788888888877 3   2 269999866 78999999999 99876321       


Q ss_pred             chHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccC
Q 012536          159 NQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESE  238 (461)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~  238 (461)
                      ..+.+........    ...         + ...++..++...+.+++.+.+       +      ...|+++.|+.+  
T Consensus       142 ~~~~~~~~~~~~~----~~~---------p-~~~~~~~~~~~~~~~~~~~~i-------~------~~~d~l~~ll~~--  192 (368)
T 1io7_A          142 EKFKEWSDLVAFR----LGK---------P-GEIFELGKKYLELIGYVKDHL-------N------SGTEVVSRVVNS--  192 (368)
T ss_dssp             HHHHHHGGGCTTS----CCC---------T-TCHHHHHHHHHHHHHHHHHHT-------T------SSCHHHHHHHTS--
T ss_pred             HHHHHHHHHHHhc----cCC---------h-HHHHHHHHHHHHHHHHHHHHh-------C------CCCCHHHHHHhc--
Confidence            2233322221110    000         1 012344455666666666665       1      346899999975  


Q ss_pred             CCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcChH
Q 012536          239 KDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHY  318 (461)
Q Consensus       239 ~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~  318 (461)
                          .++++++.+++..+++||+|||+.+++|++++|++|| +|+|+++| +                           |
T Consensus       193 ----~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P-~~~~l~~E-~---------------------------~  239 (368)
T 1io7_A          193 ----NLSDIEKLGYIILLLIAGNETTTNLISNSVIDFTRFN-LWQRIREE-N---------------------------L  239 (368)
T ss_dssp             ----SCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTT-CHHHHHHH-T---------------------------C
T ss_pred             ----cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCh-HHHHHHhc-c---------------------------h
Confidence                4899999999999999999999999999999999999 99999987 1                           4


Q ss_pred             HHHHHHHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCcc
Q 012536          319 LHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKF  398 (461)
Q Consensus       319 l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~  398 (461)
                      ++|||+|++|++|+++..+|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+||||          +..+
T Consensus       240 l~a~i~E~lRl~p~~~~~~R~~~~d~~l-~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~----------~~~~  307 (368)
T 1io7_A          240 YLKAIEEALRYSPPVMRTVRKTKERVKL-GDQTIEEGEYVRVWIASANRDEEVF-HDGEKFIPDRN----------PNPH  307 (368)
T ss_dssp             HHHHHHHHHHHSCSBCCEEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-TTTTSCCTTCC----------SCCC
T ss_pred             HHHHHHHHHHhCcccccCceeeCCCeeE-CCEEECCCCEEEecHhhhCCChhhC-CCcceeCCCCC----------CCCC
Confidence            8999999999999999778888888777 9999999999999999999999999 99999999994          1357


Q ss_pred             cccCCCCCCCCChHHHHHHHHHHHHHhccceE-EEeecCCCccceeeeEEEeeCCceeeEEeeC
Q 012536          399 AAFQAGPRICPGKEFAYRQMKILAAVLLQFFR-FKLVDETKEATYRTMFTLHVDKGLHLYAYPR  461 (461)
Q Consensus       399 ~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  461 (461)
                      +|||+|+|.|+|++||++|++++++.|+++|+ +++++  .++  .......+..+++|++++|
T Consensus       308 ~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~--~~~--~~~~~~~~~~~lpv~~~~r  367 (368)
T 1io7_A          308 LSFGSGIHLCLGAPLARLEARIAIEEFSKRFRHIEILD--TEK--VPNEVLNGYKRLVVRLKSN  367 (368)
T ss_dssp             CTTCCGGGSCTTHHHHHHHHHHHHHHHHTTCSEEEEEE--EEE--CCCSSBCCEEEEEEEEEC-
T ss_pred             cCCCCCccCCCCHHHHHHHHHHHHHHHHHhCCCCEecC--cee--ccCCcccCCceeEEEeccC
Confidence            99999999999999999999999999999996 99875  222  2223344555788999887


No 69 
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=100.00  E-value=4.3e-56  Score=415.65  Aligned_cols=352  Identities=14%  Similarity=0.161  Sum_probs=279.7

Q ss_pred             hhhhhHHHHHHHHhcCcEEEecCCCCeEEecChhhHHhhhhcCccccCCChhhHHHhHh--hccCceeeeCChhHHHHHh
Q 012536            8 FSRLFDYQTSLAKKYRTFRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWNLMRD--LFGDGIFAVDGDKWRHQRK   85 (461)
Q Consensus         8 ~~~~~~~~~~~~~~yg~~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~~~~~--~~g~~l~~~~~~~~~~~R~   85 (461)
                      ..+|+.++.+++++++++.... |  .++|++++.++++++.+  .|+..+.+.. ...  ..+.++++.|++.|+++|+
T Consensus        19 ~~dp~~~~~~lr~~~pv~~~~~-g--~~~v~~~~~v~~~l~d~--~fs~~~~~~~-~~~~~~~~~~l~~~dg~~h~~~R~   92 (394)
T 2wiy_A           19 RNNPYPWYRRLQQDHPVHKLED-G--TYLVSRYADVSHFAKLP--IMSVEPGWAD-AGPWAVASDTALGSDPPHHTVLRR   92 (394)
T ss_dssp             HHCCHHHHHHHHHHCSEEECTT-S--CEEECCHHHHHHHTTST--TEECHHHHHT-CGGGGGGGGSGGGCCTTHHHHHHH
T ss_pred             ccCccHHHHHHHhcCCeEEecC-C--eEEEcCHHHHHHHHcCC--Cccccccccc-cccchhcccccccCCchHHHHHHH
Confidence            4589999999988765565443 3  69999999999999864  4665432221 111  1245688899999999999


Q ss_pred             hhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHHHHHHhHhhhhhccCCCCCCCCCCCccchHHHHh
Q 012536           86 LASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKAF  165 (461)
Q Consensus        86 ~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~  165 (461)
                      +++++|+++.++.+.+ .+++.++.+++.+.    .++++|+...+..+++++++..+||.+.+.       ...+.+.+
T Consensus        93 ~~~~~fs~~~~~~~~~-~i~~~~~~l~~~~~----~~~~~d~~~~~~~~~~~vi~~~~~G~~~~~-------~~~~~~~~  160 (394)
T 2wiy_A           93 QTNKWFTPKLVDGWVR-TTRELVGDLLDGVE----AGQVIEARRDLAVVPTHVTMARVLQLPEDD-------ADAVMEAM  160 (394)
T ss_dssp             HHHTTCSHHHHHHHTH-HHHHHHHHHHHTCC----TTCCEEHHHHHTHHHHHHHHHHHHTCCCCC-------HHHHHHHH
T ss_pred             HHHhccCHHHHHHHHH-HHHHHHHHHHHHHh----ccCCeeHHHHHHhhhHHHHHHHHcCCCHhH-------HHHHHHHH
Confidence            9999999999999886 66778888877653    355799999999999999999999976431       12333322


Q ss_pred             hhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccCCCCCCCC
Q 012536          166 DDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEKDPESMT  245 (461)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~l~  245 (461)
                      ....   ......+        .....+...++...+.+++.+.++++++.        ..+|+++.|+.+..+  +.++
T Consensus       161 ~~~~---~~~~~~p--------~~~~~~~~~~~~~~l~~~~~~~i~~rr~~--------~~~dll~~Ll~~~~~--~~ls  219 (394)
T 2wiy_A          161 FEAM---LMQSAEP--------ADGDVDRAAVAFGYLSARVAEMLEDKRVN--------PGDGLADSLLDAARA--GEIT  219 (394)
T ss_dssp             HHHH---GGGSSSC--------CTTHHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHHHHT--TSSC
T ss_pred             HHHH---HhccCCc--------cchHHHHHHHHHHHHHHHHHHHHHHhhcC--------CCCcHHHHHHHhhhc--CCCC
Confidence            1111   0000000        01122334456677888888888887653        345899999876532  3599


Q ss_pred             HHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcChHHHHHHHH
Q 012536          246 DKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLHAALSE  325 (461)
Q Consensus       246 ~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E  325 (461)
                      ++++.+++..+++||+|||+.+++|++++|++||++|+++++|+                           +|++|||+|
T Consensus       220 ~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~---------------------------~~l~a~i~E  272 (394)
T 2wiy_A          220 ESEAIATILVFYAVGHMAIGYLIASGIELFARRPEVFTAFRNDE---------------------------SARAAIINE  272 (394)
T ss_dssp             HHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHCHHHHHHHHHCG---------------------------GGHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHCHHHHHHHHhCh---------------------------HhHHHHHHH
Confidence            99999999999999999999999999999999999999999763                           368999999


Q ss_pred             hhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCcccccCCCC
Q 012536          326 TLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGP  405 (461)
Q Consensus       326 ~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~  405 (461)
                      ++|++||++...|.+.+|.++ +|+.||+|+.|.++.+++||||++| +||++|+|+||++        ...++|||+|+
T Consensus       273 ~LRl~pp~~~~~R~~~~d~~l-~G~~Ip~G~~V~~~~~~~~rdp~~~-~dP~~F~p~R~~~--------~~~~l~FG~G~  342 (394)
T 2wiy_A          273 MVRMDPPQLSFLRFPTEDVEI-GGVLIEAGSPIRFMIGAANRDPEVF-DDPDVFDHTRPPA--------ASRNLSFGLGP  342 (394)
T ss_dssp             HHHHSCSBCEEEEEESSCEEE-TTEEECTTCCEEEEHHHHTTCTTTS-SSTTSCCTTCCGG--------GSCCSTTCCGG
T ss_pred             HHhhCCCccCeeEEECCCEEE-cCeecCCCCEEEeChHhhcCCcccC-CCccccCCCCCCC--------CCCccCCCCCC
Confidence            999999999878888888877 9999999999999999999999999 9999999999974        13589999999


Q ss_pred             CCCCChHHHHHHHHHHHHHhccceE-EEeec
Q 012536          406 RICPGKEFAYRQMKILAAVLLQFFR-FKLVD  435 (461)
Q Consensus       406 r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~  435 (461)
                      |.|+|++||++|++++++.|+++|+ +++++
T Consensus       343 r~C~G~~lA~~e~~~~l~~ll~~~~~~~l~~  373 (394)
T 2wiy_A          343 HSCAGQIISRAEATTVFAVLAERYERIELAE  373 (394)
T ss_dssp             GSCTTHHHHHHHHHHHHHHHHHHCSCEEESS
T ss_pred             CcCCcHHHHHHHHHHHHHHHHHhCCCceECC
Confidence            9999999999999999999999998 99975


No 70 
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=100.00  E-value=2.6e-56  Score=413.07  Aligned_cols=352  Identities=15%  Similarity=0.150  Sum_probs=276.5

Q ss_pred             hhHHHHHHHHhcCc-EEEecCCCCeEEecChhhHHhhhhcCccccCCChhhHH-Hh-----H-hhcc----CceeeeCCh
Q 012536           11 LFDYQTSLAKKYRT-FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWN-LM-----R-DLFG----DGIFAVDGD   78 (461)
Q Consensus        11 ~~~~~~~~~~~yg~-~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~-~~-----~-~~~g----~~l~~~~~~   78 (461)
                      |+..+.+++ +||+ |+..  |  ++++++|+.++++|.++ +.|++++.... .+     . .+.|    .++++.+++
T Consensus         1 p~~~~~~lr-~~gpv~~~~--g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~   74 (367)
T 3b4x_A            1 MYDWFKQMR-KESPVYYDG--K--VWNLFKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTSDPP   74 (367)
T ss_dssp             CHHHHHHHH-HHCSEEECS--S--SEEECSHHHHHHHHHCT-TTEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGCCTT
T ss_pred             CCHHHHHHH-HcCCceeeC--C--EEEEecHHHHHHHHcCc-hhhccCcccccccccccccccchhhcccccccccCCch
Confidence            567888885 6876 5544  3  89999999999999986 57887642111 12     2 3444    678889999


Q ss_pred             hHHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhH-HHHHHhHhhhhhccCCCCCCCCCCCc
Q 012536           79 KWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVL-LKSSLDSIFKVGFGVELNSLSGSDDF  157 (461)
Q Consensus        79 ~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~  157 (461)
                      .|+++|++++++|++++++.  + .+++.++.+++.+.     + .+|+...+ ..+++++++. +||.+ +.    .  
T Consensus        75 ~h~~~R~~~~~~fs~~~l~~--~-~i~~~~~~l~~~l~-----g-~~d~~~~~~~~~~~~vi~~-~~G~~-~~----~--  137 (367)
T 3b4x_A           75 LHDELRNLTADAFNPSNLPV--D-FVREVTVKLLSELD-----E-EFDVIESFAIPLPILVISK-MLGIN-PD----V--  137 (367)
T ss_dssp             HHHHHHHTTGGGGSGGGSCH--H-HHHHHHHHHHHTCC-----S-EEEHHHHTTTHHHHHHHHH-HHTCC-CC----H--
T ss_pred             hHHHHHHHHHHhcCHhhhcc--h-HHHHHHHHHHHhcc-----C-CcchHHHHHHhhHHHHHHH-HcCCC-Cc----H--
Confidence            99999999999999999887  4 66778888887664     3 49999654 8999999999 79987 31    1  


Q ss_pred             cchHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhcc
Q 012536          158 GNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLES  237 (461)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~  237 (461)
                       ..+.+.+......     ..+       .+. ..+.. ++...+.+++.+.++++++.        ..+|+++.|+.+ 
T Consensus       138 -~~~~~~~~~~~~~-----~~~-------~p~-~~~~~-~~~~~~~~~~~~~i~~r~~~--------~~~dll~~ll~~-  193 (367)
T 3b4x_A          138 -KKVKDWSDLVALR-----LGR-------ADE-IFSIG-RKYLELISFSKKELDSRKGK--------EIVDLTGKIANS-  193 (367)
T ss_dssp             -HHHHHHHHHHHTT-----TTS-------TTG-GGCCC-HHHHHHHHHHHHHHHHHTTT--------CCSSHHHHHHTS-
T ss_pred             -HHHHHHHHHHHhc-----cCC-------Chh-hHHHH-HHHHHHHHHHHHHHHHHhcC--------CCCCHHHHHHhc-
Confidence             3333333222111     011       010 01112 56677888888888877653        346899999976 


Q ss_pred             CCCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcCh
Q 012536          238 EKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMH  317 (461)
Q Consensus       238 ~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp  317 (461)
                           .++++++.+++..+++||+|||+.+++|++++|++ |++|+++++|+                   +        
T Consensus       194 -----~ls~~el~~~~~~l~~AG~eTt~~~l~~~l~~L~~-P~~~~~l~~e~-------------------~--------  240 (367)
T 3b4x_A          194 -----NLSELEKEGYFILLMIAGNETTTNLIGNAIEDFTL-YNSWDYVREKG-------------------A--------  240 (367)
T ss_dssp             -----SSCHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHH-TTCHHHHHHHC-------------------S--------
T ss_pred             -----cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-HHHHHHHHhCC-------------------c--------
Confidence                 48999999999999999999999999999999999 99999999882                   1        


Q ss_pred             HHHHHHHHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCc
Q 012536          318 YLHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYK  397 (461)
Q Consensus       318 ~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~  397 (461)
                        +|||+|++|++|+++...|.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+||||.          ..
T Consensus       241 --~a~i~E~lRl~p~~~~~~R~~~~d~~l-~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~~----------~~  306 (367)
T 3b4x_A          241 --LKAVEEALRFSPPVMRTIRVTKEKVKI-RDQVIDEGELVRVWIASANRDEEVF-KDPDSFIPDRTP----------NP  306 (367)
T ss_dssp             --HHHHHHHHHHSCSBCCEEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCSS----------CC
T ss_pred             --hHHHHHHHHhcCcccCeeEEeCCCeEE-CCEEECCCCEEEEChhhhcCCcccC-CCccccCCCCCC----------CC
Confidence              789999999999999778888888777 9999999999999999999999999 999999999984          25


Q ss_pred             ccccCCCCCCCCChHHHHHHHHHHHHHhccce-EEEeecCCCccceeeeEEEeeCCceeeEEee
Q 012536          398 FAAFQAGPRICPGKEFAYRQMKILAAVLLQFF-RFKLVDETKEATYRTMFTLHVDKGLHLYAYP  460 (461)
Q Consensus       398 ~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  460 (461)
                      ++|||+|+|.|+|++||++|++++++.|+++| +++++++  ++  ..........+++|++++
T Consensus       307 ~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~--~~--~~~~~~~~~~~lpv~~~~  366 (367)
T 3b4x_A          307 HLSFGSGIHLCLGAPLARLEARIALEEFAKKFRVKEIVKK--EK--IDNEVLNGYRKLVVRVER  366 (367)
T ss_dssp             CCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEEEEE--EE--CCCSSBCSEEEEEEEEEE
T ss_pred             CcCCCCCCccCccHHHHHHHHHHHHHHHHHhCCCceeCCc--cc--cccccccCcceEEEEecC
Confidence            79999999999999999999999999999999 6999763  22  222333444577777764


No 71 
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=100.00  E-value=9.2e-56  Score=416.47  Aligned_cols=373  Identities=18%  Similarity=0.224  Sum_probs=284.9

Q ss_pred             chhhhhHHHHHHHHhcC-cEEEecCCCCeEEecChhhHHhhhhcCccccCCChhhHH--------HhHhhccCceeeeCC
Q 012536            7 HFSRLFDYQTSLAKKYR-TFRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWN--------LMRDLFGDGIFAVDG   77 (461)
Q Consensus         7 ~~~~~~~~~~~~~~~yg-~~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~--------~~~~~~g~~l~~~~~   77 (461)
                      +..+|+.+ ..++ +|| ++.+..++.. ++|++++.+++|++++ . |........        ......+.++++.++
T Consensus        31 ~~~~P~~~-~~lr-~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg  105 (416)
T 3p3o_A           31 DPNFSWDS-PEVA-EAREKSWIARTPLA-LLVLRYAEADQLARDK-R-LISGFRGLVDMVGTPEGPVRDFMVDFLQSLDG  105 (416)
T ss_dssp             STTCCTTS-HHHH-HHHHHCSEEECSSS-EEECSHHHHHHHHHCT-T-EECSHHHHHHHHTCCSSHHHHHHHHSGGGCCH
T ss_pred             cccCCchH-HHHH-HhCCccccccCCCc-eEEeCHHHHHHHHcCc-c-cccCCccccccccccccchhhhhcCccccCCc
Confidence            45688888 5554 576 4666665555 9999999999999886 2 443322111        111223457889999


Q ss_pred             hhHHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHh-HHHHHHhHhhhhhccCCCCCCCCCCC
Q 012536           78 DKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDV-LLKSSLDSIFKVGFGVELNSLSGSDD  156 (461)
Q Consensus        78 ~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~-~~~~~~~~i~~~~fG~~~~~~~~~~~  156 (461)
                      +.|+++|++++++|+++.++.+.+ .+++.++.+++.+ .    ++.+|+... ...+++++++. +||.+....     
T Consensus       106 ~~h~~~Rr~~~~~fs~~~l~~~~~-~i~~~~~~ll~~l-~----~g~~d~~~~~~~~~~~~vi~~-l~G~~~~~~-----  173 (416)
T 3p3o_A          106 ADHRRLRGLATHPFTPRRITAVQP-FVRSTVEQLIDKL-P----QGDFDFVQHFPHPLPALVMCQ-LLGFPLEDY-----  173 (416)
T ss_dssp             HHHHHHHHTTCGGGSHHHHHHHHH-HHHHHHHHHHHTC-C----SSSEEHHHHTTTHHHHHHHHH-HHTCCGGGH-----
T ss_pred             hHHHHHHHHHHHhhCHHHHHHHHH-HHHHHHHHHHHhh-c----cCCccHHHHHHHHHHHHHHHH-HhCCCHHHH-----
Confidence            999999999999999999999986 7788888888877 2    235996654 56699999998 588654321     


Q ss_pred             ccchHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhc
Q 012536          157 FGNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLE  236 (461)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~  236 (461)
                        ..+.+...........           .......+...++...+.+++.+.++++++.        ..+|+++.|+.+
T Consensus       174 --~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~--------~~~dll~~ll~~  232 (416)
T 3p3o_A          174 --DTVGRLSIETNLGLAL-----------SNDQDILVKVEQGLGRMFDYLVAAIEKRKVE--------PGDDLTSDIVRA  232 (416)
T ss_dssp             --HHHHHHHHTTCGGGTT-----------CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHH
T ss_pred             --HHHHHHHHHHHhhccc-----------ccchhhHHHHHHHHHHHHHHHHHHHHHHHhC--------CCccHHHHHHHh
Confidence              2222222222111000           0011234556788888999999999988765        446899999987


Q ss_pred             cCCCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcC
Q 012536          237 SEKDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKM  316 (461)
Q Consensus       237 ~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (461)
                      ..++  .++++++.+++..+++||+|||+.+++|++++|++||++|+++++|++                          
T Consensus       233 ~~~~--~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~--------------------------  284 (416)
T 3p3o_A          233 FHDG--VLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPE--------------------------  284 (416)
T ss_dssp             HHTT--SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG--------------------------
T ss_pred             hccC--CCCHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH--------------------------
Confidence            6443  799999999999999999999999999999999999999999998732                          


Q ss_pred             hHHHHHHHHhhcCCCCC-CCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCC
Q 012536          317 HYLHAALSETLRLYPAV-PVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESP  395 (461)
Q Consensus       317 p~l~a~i~E~lRl~~~~-~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~  395 (461)
                       |+++||+|++|++|++ ....|.+.+|.++ +|+.||+|+.|.++.+++||||++| +||++|+|+||..         
T Consensus       285 -~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l-~G~~Ip~G~~V~~~~~~~~rdp~~~-~dp~~F~p~R~~~---------  352 (416)
T 3p3o_A          285 -LAPQAVEEVLRWSPTLPVTATRVAAEDFEV-NGVRIPTGTPVFMCAHVAHRDPRVF-ADADRFDITVKRE---------  352 (416)
T ss_dssp             -GHHHHHHHHHHHSCSCSSCCEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTC-TTTTSCCTTCCCS---------
T ss_pred             -HHHHHHHHHHhhccccccCcceEeCCCeEE-CCEEECCCCEEEEChHHhcCChhcc-CCccccCCCCCCC---------
Confidence             6899999999999999 4567777777777 9999999999999999999999999 9999999999842         


Q ss_pred             CcccccCCCCCCCCChHHHHHHHHHHHHHhccceE-EEeecCCCccceeeeEEEeeCCceeeEEee
Q 012536          396 YKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFFR-FKLVDETKEATYRTMFTLHVDKGLHLYAYP  460 (461)
Q Consensus       396 ~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  460 (461)
                      ..++|||+|+|.|+|++||++|++++++.|+++|+ ++++++.   .+.....+.....++|++.|
T Consensus       353 ~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~---~~~~~~~~~g~~~lpv~~~p  415 (416)
T 3p3o_A          353 APSIAFGGGPHFCLGTALARLELTEAVAALATRLDPPQIAGEI---TWRHELGVAGPDALPLRFGA  415 (416)
T ss_dssp             SCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSCCEEECSCC---EECCCTTCCCEEECEEEESC
T ss_pred             CCeecCCCCCccCcCHHHHHHHHHHHHHHHHHhCCccccCCCC---ceecCCCccCcceeeEEEec
Confidence            35899999999999999999999999999999995 8887532   22222222223356676654


No 72 
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=100.00  E-value=1.1e-55  Score=405.65  Aligned_cols=320  Identities=18%  Similarity=0.180  Sum_probs=251.8

Q ss_pred             HhcCcEEEecCCCCeEEecChhhHHhhhhcCccccCCChhhHHHhHhhccCceeeeCChhHHHHHhhhcccCCHHHHHHh
Q 012536           20 KKYRTFRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWNLMRDLFGDGIFAVDGDKWRHQRKLASYEFSTKILRDF   99 (461)
Q Consensus        20 ~~yg~~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~g~~l~~~~~~~~~~~R~~~~~~fs~~~l~~~   99 (461)
                      ++||++...  |  +++|+||+.+++++.++ +.|++++..... .. .+.++++.+++.|+++|++++++|++++++.+
T Consensus         2 r~~gpv~~~--g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~-~~-~~~~l~~~~g~~~~~~R~~~~~~fs~~~l~~~   74 (343)
T 2rfb_A            2 RLNDPVHYD--G--AWHVYKYSDVKHVLMND-KIFSSNPGNRYS-NA-GGISFITMDNPEHKEFRDISAPYFLPSKINDY   74 (343)
T ss_dssp             -CCCCEEET--T--EEEECSHHHHHHHHHCT-TTEESSCSSCCC-----CCGGGGCCHHHHHHHHHHHHHHHSHHHHGGG
T ss_pred             CCcCCeeee--C--eEEEcCHHHHHHHHhCh-hhcccCCcCCCC-Cc-cccccccCCchHHHHHHHHhhhhcCHHHHHHH
Confidence            578864333  3  89999999999999986 568876521111 22 36778889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccCCceeHHHhH-HHHHHhHhhhhhccCCCCCCCCCCCccchHHHHhhhhhhHHHhhhhh
Q 012536          100 SSAVFRANAEKLTSKFSVAAAAKQAIDMQDVL-LKSSLDSIFKVGFGVELNSLSGSDDFGNQFTKAFDDSNFIVYCRYVD  178 (461)
Q Consensus       100 ~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (461)
                      .+ .+++.++.+++.+.       ++|+...+ ..+++++++.+ ||.+.+.       ...+.+.......     ...
T Consensus        75 ~~-~i~~~~~~l~~~l~-------~~d~~~~~~~~~~~~vi~~~-~G~~~~~-------~~~~~~~~~~~~~-----~~~  133 (343)
T 2rfb_A           75 KD-FIEETSNDLIKNID-------NKDIISEYAVRLPVNIISKI-LGIPDSD-------MPLFKLWSDYIIG-----NKR  133 (343)
T ss_dssp             HH-HHHHHHHHHHTTCT-------TSCHHHHTTTHHHHHHHHHH-HTCCGGG-------HHHHHHHHHHHHT-----SCC
T ss_pred             HH-HHHHHHHHHHHhcc-------ccCHHHHHhhhhhHHHHHHH-cCCCHHH-------HHHHHHHHHHHhh-----ccC
Confidence            86 67788888887653       68998855 89999999998 9976531       1233332222111     000


Q ss_pred             HHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccCCCCCCCCHHHHHHHHHHHhh
Q 012536          179 VFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEKDPESMTDKYLRDITLNFII  258 (461)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~  258 (461)
                      |.+        ...++. ++...+.+++.+.+               ..| ++.|+.+..+ +..++++++.+++..+++
T Consensus       134 p~~--------~~~~~~-~~~~~~~~~~~~~i---------------~~d-l~~ll~~~~~-~~~l~~~ei~~~~~~~~~  187 (343)
T 2rfb_A          134 DEN--------FNYVNN-RMVSRLLEIFKSDS---------------HGI-INVLAGSSLK-NRKLTMDEKIKYIMLLII  187 (343)
T ss_dssp             SSH--------HHHHHH-HHHHHHHHHHHSCC---------------SSH-HHHHHTCBCS-SSBCCHHHHHHHHHHHHH
T ss_pred             cch--------hhHHHH-HHHHHHHHHHHHHH---------------hcc-HHHHHhhhcC-CCCCCHHHHHHHHHHHHH
Confidence            100        011222 44444444444333               246 8888876432 456999999999999999


Q ss_pred             hcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcChHHHHHHHHhhcCCCCC-CCCC
Q 012536          259 AGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAV-PVDG  337 (461)
Q Consensus       259 ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~-~~~~  337 (461)
                      ||+|||+.+++|++++|++||++|+|+++|+                              +|||+|++|++|++ +..+
T Consensus       188 AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~------------------------------~a~i~E~lRl~p~~~~~~~  237 (343)
T 2rfb_A          188 GGNETTTNLIGNMIRVIDENPDIIDDALKNR------------------------------SGFVEETLRYYSPIQFLPH  237 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCGGGHHHHHHCH------------------------------HHHHHHHHHHSCSBCCBCC
T ss_pred             HhhHHHHHHHHHHHHHHHhCHHHHHHHHcCc------------------------------HHHHHHHHhhCcccccccc
Confidence            9999999999999999999999999999873                              78999999999999 9778


Q ss_pred             ccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCcccccCCCCCCCCChHHHHHH
Q 012536          338 KNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQAGPRICPGKEFAYRQ  417 (461)
Q Consensus       338 r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~  417 (461)
                      |.+.+|.++ +||.||||+.|.++.+++||||++| +||++|+||||           ..++|||+|+|.|+|++||++|
T Consensus       238 R~~~~d~~~-~g~~Ip~Gt~V~~~~~~~~rd~~~~-~dp~~F~PeR~-----------~~~~~FG~G~r~C~G~~lA~~e  304 (343)
T 2rfb_A          238 RFAAEDSYI-NNKKIKKGDQVIVYLGSANRDETFF-DEPDLFKIGRR-----------EMHLAFGIGIHMCLGAPLARLE  304 (343)
T ss_dssp             CEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCS-----------SCCCTTCCSTTSCTTHHHHHHH
T ss_pred             eEECCCeEE-CCEEECCCCEEEEChhhhCCCcccC-CCccccCCCCC-----------CCCccCCCCCccCCChHHHHHH
Confidence            888888777 9999999999999999999999999 99999999994           2479999999999999999999


Q ss_pred             HHHHHHHhccceE-EEeecC
Q 012536          418 MKILAAVLLQFFR-FKLVDE  436 (461)
Q Consensus       418 ~~~~l~~ll~~f~-~~~~~~  436 (461)
                      ++++++.|+++|+ ++++++
T Consensus       305 ~~~~la~ll~~f~~~~~~~~  324 (343)
T 2rfb_A          305 ASIALNDILNHFKRIKIDYK  324 (343)
T ss_dssp             HHHHHHHHHHHCSCCCBCTT
T ss_pred             HHHHHHHHHHhCCCceeCCC
Confidence            9999999999996 999774


No 73 
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=100.00  E-value=2e-55  Score=425.63  Aligned_cols=387  Identities=15%  Similarity=0.147  Sum_probs=273.1

Q ss_pred             hhhhhHHHHHHHHhcC--cEEEecCCCCe-------EEecChhhHHhhhhcCc----cccCCChhhHHHhHhhcc----C
Q 012536            8 FSRLFDYQTSLAKKYR--TFRLLQPSCSE-------IFTTDPVNIEHILKTNF----SNYGKGDYNWNLMRDLFG----D   70 (461)
Q Consensus         8 ~~~~~~~~~~~~~~yg--~~~~~~~~~~~-------v~v~dp~~~~~il~~~~----~~f~~~~~~~~~~~~~~g----~   70 (461)
                      .++++.++.+++++||  +|++.+++.++       |++.+++..+.++....    +.+... +.. .. .++|    .
T Consensus        51 ~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~~v~k~~~~~~~-~~~-~~-~l~g~~~~~  127 (495)
T 3dsk_A           51 DQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVDKVEKKDLLTGT-YMP-ST-ELTGGYRIL  127 (495)
T ss_dssp             TSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTTTEECSSCTTSS-SCC-CG-GGGTTCCCG
T ss_pred             hcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeeccccccccccccccc-CCC-Cc-cccCCCcce
Confidence            4789999999999996  58888998888       66677776666665421    111111 111 11 3444    2


Q ss_pred             ceeeeCChhHHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHHHHHHhHhhhhhccCCCCC
Q 012536           71 GIFAVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLLKSSLDSIFKVGFGVELNS  150 (461)
Q Consensus        71 ~l~~~~~~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~  150 (461)
                      +++..+++.|+++|+++.+.|++.. ..+.+ .+++.++.+++.|.+...+++++|+.+++..+++++++.++||.+.+.
T Consensus       128 ~~~~~~g~~h~~~R~~~~~~f~~~~-~~~~~-~i~~~~~~ll~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~~~G~~~~~  205 (495)
T 3dsk_A          128 SYLDPSEPKHEKLKNLLFFLLKSSR-NRIFP-EFQATYSELFDSLEKELSLKGKADFGGSSDGTAFNFLARAFYGTNPAD  205 (495)
T ss_dssp             GGCCTTSHHHHHHHHHHHHHHHHTT-TTHHH-HHHHHHHHHHHHHHHHHHHHSSEESHHHHHHHHHHHHHHHHHSCCGGG
T ss_pred             eeeCCCchHHHHHHHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHhccCCCccHHHHHHHHHHHHHHHHHcCCCcch
Confidence            4566799999999999999998754 66775 677888999998876444456899999999999999999999988765


Q ss_pred             CCCCCCccchHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhh----h--hhhhcc
Q 012536          151 LSGSDDFGNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQM----K--NVELDR  224 (461)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~--~~~~~~  224 (461)
                      .+    ....+...+........    .+..  ...++               .++.+.+.++++..    .  .....+
T Consensus       206 ~~----~~~~~~~~~~~~~~~~~----~p~~--~~~~p---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (495)
T 3dsk_A          206 TK----LKADAPGLITKWVLFNL----HPLL--SIGLP---------------RVIEEPLIHTFSLPPALVKSDYQRLYE  260 (495)
T ss_dssp             ST----TTTCHHHHHHHHHHHHH----GGGC--CCSSC---------------HHHHHHHHSSSCCCGGGGHHHHHHHHH
T ss_pred             hh----hhhhHHHHHHHHHHHhh----hhHh--HhccH---------------HHHHHHHHHhhcccchhhhhhHHHHHH
Confidence            31    11222222222111100    0000  00011               01111111110000    0  000000


Q ss_pred             ChhhHHHHHhhccCCCCCCCCHHHHHHHHHHHh-hhcccchHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHhhcCCCcch
Q 012536          225 GKEDILSRFLLESEKDPESMTDKYLRDITLNFI-IAGKDTTANTLTWFFYMLCK-HPLIQEKAALDVREATEAQGNLCAD  302 (461)
Q Consensus       225 ~~~~~l~~ll~~~~~~~~~l~~~~i~~~~~~~~-~ag~~tt~~~l~~~l~~L~~-~p~~~~~lr~Ei~~~~~~~~~~~~~  302 (461)
                      ...+.++.+++..+  +..++++++..+++.++ +||++||+.+++|++++|+. ||++|++||+|++.+++..+     
T Consensus       261 ~~~~~~~~ll~~~~--~~~l~~~ei~~~~~~~l~~ag~~tt~~~l~~~l~~L~~~~P~~~~~lr~Ei~~~~~~~~-----  333 (495)
T 3dsk_A          261 FFLESAGEILVEAD--KLGISREEATHNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNRLAEEIRSVIKSNG-----  333 (495)
T ss_dssp             HHHHHCHHHHHHHH--HTTCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTT-----
T ss_pred             HHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhccCC-----
Confidence            01122233333331  23589999998766655 99999999999999999996 99999999999999987653     


Q ss_pred             hhhhcccHHHhhcChHHHHHHHHhhcCCCCCCCCCcccccccccc---CCeeecCCCEEEEehhhhccCccCccCCCCCc
Q 012536          303 EFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILP---DGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEF  379 (461)
Q Consensus       303 ~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~---~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F  379 (461)
                         +.++.+++.+||||+|||+|++|++|+++...|++.+|.++.   +||.||||+.|.++.+++||||++| +||++|
T Consensus       334 ---~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~a~~d~~l~~~~~g~~IpkG~~v~~~~~~~~~dp~~~-~dp~~F  409 (495)
T 3dsk_A          334 ---GELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIF-DRADEF  409 (495)
T ss_dssp             ---TCCCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEEECSSCEEEECTTCEEEEEHHHHHTCTTTS-TTTTSC
T ss_pred             ---CCCCHHHHhcCHHHHHHHHHHHhcCCCccccceeecCCeEeccCCCceEECCCCEEEeccHHhhCCcccC-CCcccc
Confidence               236999999999999999999999999999989988888875   6999999999999999999999999 999999


Q ss_pred             ccCCcCCC-Ccc-----CCCCCCcccccCCCCCCCCChHHHHHHHHHHHHHhccceEEEeec
Q 012536          380 RPERWLVN-GVF-----RSESPYKFAAFQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLVD  435 (461)
Q Consensus       380 ~P~R~~~~-~~~-----~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~  435 (461)
                      +|+||+++ +..     .-.....++|||+|+|.|+|++||.+|++++++.|+++|++...+
T Consensus       410 ~P~Rfl~~~~~~~~~~~~fg~G~~~~~fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~  471 (495)
T 3dsk_A          410 VPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIE  471 (495)
T ss_dssp             CTTTTCHHHHHHGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred             CCcccCCCCccchhhcccccCCcCcCCCCCCCCcCchHHHHHHHHHHHHHHHHHHCceEeCC
Confidence            99999972 110     001112345666666999999999999999999999999987764


No 74 
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=100.00  E-value=4.3e-54  Score=414.24  Aligned_cols=376  Identities=15%  Similarity=0.162  Sum_probs=266.3

Q ss_pred             hhhHHHHHHHHhcC--cEEEecCCCC-------eEEecChhhHHhhhhcC----ccccCCChhhHHHhHhhcc----Cce
Q 012536           10 RLFDYQTSLAKKYR--TFRLLQPSCS-------EIFTTDPVNIEHILKTN----FSNYGKGDYNWNLMRDLFG----DGI   72 (461)
Q Consensus        10 ~~~~~~~~~~~~yg--~~~~~~~~~~-------~v~v~dp~~~~~il~~~----~~~f~~~~~~~~~~~~~~g----~~l   72 (461)
                      +++.++.+++++||  +|++.+++.+       +|++.+.+..+.++...    ...+.... .. .. .+.|    .++
T Consensus        35 ~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~-~~~g~~~~~~~  111 (473)
T 3dan_A           35 GRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDVSKVEKKDLFTGTY-MP-ST-KLTGGYRVLSY  111 (473)
T ss_dssp             HHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCTTTEECSSCTTSSS-CC-CG-GGGTTSCCGGG
T ss_pred             CchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecCCcceeccccccccc-cC-Cc-cccCCCcceee
Confidence            88999999999996  4777776444       34444544444444411    11111110 00 11 2223    346


Q ss_pred             eeeCChhHHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhHHHHHHhHhhhhhccCCCCCCC
Q 012536           73 FAVDGDKWRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVLLKSSLDSIFKVGFGVELNSLS  152 (461)
Q Consensus        73 ~~~~~~~~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~  152 (461)
                      +..+++.|+++|+++++.|+++ +..+.+ .+++.++.+++.|.....+++++|+.+++..+++++++.++||.+++..+
T Consensus       112 ~~~~~~~h~~~R~~~~~~f~~~-~~~~~~-~i~~~~~~ll~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~~~G~~~~~~~  189 (473)
T 3dan_A          112 LDPSEPRHAQLKNLLFFMLKNS-SNRVIP-QFETTYTELFEGLEAELAKNGKAAFNDVGEQAAFRFLGRAYFNSNPEETK  189 (473)
T ss_dssp             CCTTSHHHHHHHHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHHHSCEECHHHHHHHHHHHHHHHHHSCCGGGST
T ss_pred             eCCCcHHHHHHHHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHhccCCcccHHHHHHHHHHHHHHHHHcCCCCCchh
Confidence            7789999999999999999994 888885 67888999999887644445689999999999999999999998876521


Q ss_pred             CCCCccchHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHH------------HHHHHHHHHHHHHHHHHHHHhhhhh
Q 012536          153 GSDDFGNQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASL------------KRNIKLIDSFIFELIRCKREQMKNV  220 (461)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~i~~~~~~~~~~  220 (461)
                          ....+...+.........    +.  +...++ ......            .+..+.+.++               
T Consensus       190 ----~~~~~~~~~~~~~~~~~~----p~--~~~~lp-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------  243 (473)
T 3dan_A          190 ----LGTSAPTLISSWVLFNLA----PT--LDLGLP-WFLQEPLLHTFRLPAFLIKSTYNKLYDY---------------  243 (473)
T ss_dssp             ----TTTCHHHHHHHHHHHHHG----GG--CCCSCC-HHHHHHHHSSSCCCGGGTHHHHHHHHHH---------------
T ss_pred             ----hhhhHHHHHHHHHHHhcc----ch--hhhcch-HHHHHHHhhhccchHhhhhhchhhhHHH---------------
Confidence                112222221111100000    00  000000 000000            0111111111               


Q ss_pred             hhccChhhHHHHHhhccCCCCCCCCHHHHHHHHHHHh-hhcccchHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHhh-cC
Q 012536          221 ELDRGKEDILSRFLLESEKDPESMTDKYLRDITLNFI-IAGKDTTANTLTWFFYMLCK-HPLIQEKAALDVREATEA-QG  297 (461)
Q Consensus       221 ~~~~~~~~~l~~ll~~~~~~~~~l~~~~i~~~~~~~~-~ag~~tt~~~l~~~l~~L~~-~p~~~~~lr~Ei~~~~~~-~~  297 (461)
                           -.++++.+++..++  ..+++++++.+++.++ ++|++||+.+++|++++|++ ||++|++||+|++.+++. .+
T Consensus       244 -----~~~~~~~ll~~~~~--~~l~~~ei~~~~l~~~g~~~~~tta~~l~~~l~~L~~~~P~~~~~lr~Ei~~~~~~~~~  316 (473)
T 3dan_A          244 -----FQSVATPVMEQAEK--LGVPKDEAVHNILFAVCFNTFGGVKILFPNTLKWIGLAGENLHTQLAEEIRGAIKSYGD  316 (473)
T ss_dssp             -----HHHHCHHHHHHHHH--HTCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHST
T ss_pred             -----HHHHHHHHHHhHhh--cCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcccC
Confidence                 12444445544322  3589999998886666 78888899999999999999 899999999999999876 32


Q ss_pred             CCcchhhhhcccHHHhhcChHHHHHHHHhhcCCCCCCCCCcccccccccc---CCeeecCCCEEEEehhhhccCccCccC
Q 012536          298 NLCADEFAKLVTEAALEKMHYLHAALSETLRLYPAVPVDGKNAAEDDILP---DGFKVKKGDGVNYMTYAMGRMTYIWGE  374 (461)
Q Consensus       298 ~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~r~~~~~~~~~---~g~~ip~g~~v~~~~~~~~~d~~~~g~  374 (461)
                              ..++.+++.+||||+|||+|++|++|+++...|++.+|.++.   +||.||||+.|.++.+++||||++| +
T Consensus       317 --------~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~~~~~g~~Ip~G~~v~~~~~~~~~dp~~~-~  387 (473)
T 3dan_A          317 --------GNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVF-D  387 (473)
T ss_dssp             --------TSCCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEEECSSCEEEECTTCEEEEEHHHHTTCTTTS-S
T ss_pred             --------CCCCHHHHhcCchHHHHHHHHHhcCCCcccccccccCCcEeecCCCceEeCCCCEEEechHHhhCCchhc-C
Confidence                    236999999999999999999999999999888888887765   8999999999999999999999999 9


Q ss_pred             CCCCcccCCcCCCCccCCCCCCccc---------ccCCCCCCCCChHHHHHHHHHHHHHhccceEEEeecC
Q 012536          375 DAEEFRPERWLVNGVFRSESPYKFA---------AFQAGPRICPGKEFAYRQMKILAAVLLQFFRFKLVDE  436 (461)
Q Consensus       375 ~p~~F~P~R~~~~~~~~~~~~~~~~---------~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~  436 (461)
                      ||++|+|+||++++    .....++         +||+|+|.|+|++||.+|++++++.|+++|++...++
T Consensus       388 dp~~F~p~R~~~~~----~~~~~~~~fg~G~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~  454 (473)
T 3dan_A          388 RPEEYVPDRFVGDG----EALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYDSFEIEL  454 (473)
T ss_dssp             STTSCCTTTTSGGG----GGGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred             CcccCCccccCCCc----ccccccceecCCcCcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCeEEccC
Confidence            99999999999731    1123344         4555559999999999999999999999999766543


No 75 
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=100.00  E-value=7.9e-54  Score=402.19  Aligned_cols=373  Identities=14%  Similarity=0.091  Sum_probs=270.3

Q ss_pred             chhhhhHHHHHHHHhcCcEEEecCCCCeEEecChhhHHhhhhcCccccCCChhh--HHHhH--h-hccCceeeeCChhHH
Q 012536            7 HFSRLFDYQTSLAKKYRTFRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYN--WNLMR--D-LFGDGIFAVDGDKWR   81 (461)
Q Consensus         7 ~~~~~~~~~~~~~~~yg~~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~--~~~~~--~-~~g~~l~~~~~~~~~   81 (461)
                      +..||+.++.+++++.+++.  .++.++++|++++.++++|+++ ..|+.....  .....  . ..+..++..|+++|+
T Consensus        32 ~~~dP~~~~~~lR~~gPV~~--~~~~~~~~vt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~~~~~Dg~~H~  108 (412)
T 4dnj_A           32 YFADPYPEQETLREAGPVVY--LDKWNVYGVARYAEVYAVLNDP-LTFCSSRGVGLSDFKKEKPWRPPSLILEADPPAHT  108 (412)
T ss_dssp             HHHSCHHHHHHHHHHCSSEE--ETTTTEEEECSHHHHHHHHTCT-TTEESTTCSSSSCTTTSCCSSCCCTTTTCCTTHHH
T ss_pred             HHhCcHHHHHHHHhcCCEEE--ECCCCEEEECCHHHHHHHHcCC-ccccCCCccccccccccccccCCCccccCChHHHH
Confidence            45689999999987545553  4566789999999999999876 556543211  00110  0 112347788999999


Q ss_pred             HHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHH-HhHHHHHHhHhhhhhccCCCCCCCCCCCccch
Q 012536           82 HQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQ-DVLLKSSLDSIFKVGFGVELNSLSGSDDFGNQ  160 (461)
Q Consensus        82 ~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~-~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~  160 (461)
                      ++|++++++|++++++.+.+ .+++.++.+++.+..   .++.+|+. ++...+..++++.++.....+.        ..
T Consensus       109 r~R~~~~~~Fs~~~l~~~~~-~i~~~~~~l~~~~~~---~~~~~D~v~~~~~~~~~~~i~~l~g~~~~~~--------~~  176 (412)
T 4dnj_A          109 RTRAVLSKVLSPATMKRLRD-GFAAAADAKIDELLA---RGGNIDAIADLAEAYPLSVFPDAMGLKQEGR--------EN  176 (412)
T ss_dssp             HHHHHHHHHTCHHHHHHHHH-HHHHHHHHHHHHHHH---TTSEEETCCCCCCHHHHHHHHHHHTCCSTTG--------GG
T ss_pred             HHHhhcccccCHHHHHHhhH-HHHHHHHHHHHhhhc---cCCCceeHHHHHhhhhHhHHHHHcCCchhhh--------hh
Confidence            99999999999999999986 667888888887754   34567754 5667788888887654322211        11


Q ss_pred             HHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccCCC
Q 012536          161 FTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEKD  240 (461)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~  240 (461)
                      +...........              ....   ...+........+...+.+..+...      ...+.+..++... .+
T Consensus       177 ~~~~~~~~~~~~--------------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~-~~  232 (412)
T 4dnj_A          177 LLPYAGLVFNAF--------------GPPN---ELRQSAIERSAPHQAYVAEQCQRPN------LAPGGFGACIHAF-SD  232 (412)
T ss_dssp             HHHHHHHHHHHT--------------SCSS---HHHHHHHHTCHHHHHHHHHHTSGGG------SCTTSHHHHHHHT-TT
T ss_pred             hhhhhhcccccc--------------cccH---HHHHHHHHHHHHHHHHHHHHHHhhc------cccccchhhhHhh-hh
Confidence            211111111000              0000   0011111111222223333322222      2234445555544 33


Q ss_pred             CCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcChHHH
Q 012536          241 PESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLH  320 (461)
Q Consensus       241 ~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~  320 (461)
                      +..++++++.+++..+++||+|||+.+++|++++|++||++|+||++|                           ..|+.
T Consensus       233 ~~~l~~~e~~~~~~~l~~AG~eTTa~~l~~~~~~L~~~P~~~~~Lr~~---------------------------~~~~~  285 (412)
T 4dnj_A          233 TGEITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRAD---------------------------PSLAR  285 (412)
T ss_dssp             TTSSCTTHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHC---------------------------GGGHH
T ss_pred             ccchhHHHHHHHHHHHHhccchhHHHHHHHHHHHHhhCHHHHHHHHhC---------------------------ccccc
Confidence            457999999999999999999999999999999999999999999864                           24678


Q ss_pred             HHHHHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCcccc
Q 012536          321 AALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAA  400 (461)
Q Consensus       321 a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~~  400 (461)
                      ++++|++|++|+++...|.+.+|.++ +|+.||+|+.|.++.+++||||++| +||++|+||||.          ..++|
T Consensus       286 ~~~eE~lR~~pp~~~~~R~a~~d~~l-~G~~Ip~G~~V~~~~~a~~rDp~~f-~dP~~F~PeR~~----------~~~lp  353 (412)
T 4dnj_A          286 NAFEEAVRFESPVQTFFRTTTRDVEL-AGATIGEGEKVLMFLGSANRDPRRW-DDPDRYDITRKT----------SGHVG  353 (412)
T ss_dssp             HHHHHHHHHHCSBCEEEEEESSCEEE-TTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTSCC----------TTCCT
T ss_pred             cccceeeeecCCcccccccCCCCeEE-CCccCCCCCeEEeehhhccCChhhC-CCccccCCCCCC----------CCCCC
Confidence            99999999999999999999999887 9999999999999999999999999 999999999984          35789


Q ss_pred             cCCCCCCCCChHHHHHHHHHHHHHhccce-EEEeecCCCccceeeeEEEeeCCceeeEEee
Q 012536          401 FQAGPRICPGKEFAYRQMKILAAVLLQFF-RFKLVDETKEATYRTMFTLHVDKGLHLYAYP  460 (461)
Q Consensus       401 Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  460 (461)
                      ||+|+|.|+|++||++|++++++.|+++| +++++++   +.+..+.++.+...++|+++|
T Consensus       354 FG~G~r~CiG~~lA~~E~~~~l~~Ll~rf~~~~l~~~---~~~~~~~~~rg~~~LpV~~tP  411 (412)
T 4dnj_A          354 FGSGVHMCVGQLVARLEGEVVLAALARKVAAIEIAGP---LKRRFNNTLRGLESLPIQLTP  411 (412)
T ss_dssp             TCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEECSC---CEEEECSSBEEEEECEEEEEE
T ss_pred             cCCCCcCChhHHHHHHHHHHHHHHHHHHCCCCeECCC---CeeecCCCccCCcceeEEEEe
Confidence            99999999999999999999999999999 8998753   333334445556678999887


No 76 
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=100.00  E-value=1.5e-49  Score=372.24  Aligned_cols=373  Identities=13%  Similarity=0.114  Sum_probs=269.9

Q ss_pred             hhhhhHHHHHHHHhcCc--EEEecCCCCeEEecChhhHHhhhhcCccccCCChhhHHHh-HhhccCceeeeCChhHHHHH
Q 012536            8 FSRLFDYQTSLAKKYRT--FRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNWNLM-RDLFGDGIFAVDGDKWRHQR   84 (461)
Q Consensus         8 ~~~~~~~~~~~~~~yg~--~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~~~~-~~~~g~~l~~~~~~~~~~~R   84 (461)
                      ..++|..+.+++++.++  +..-. +....+|++++.+++|++.+ +.|+......... ....+..++..|+++|+++|
T Consensus        36 ~~~~~~~~~~lr~~~~~~~~~~~~-~gg~W~vtr~~dv~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~D~p~H~r~R  113 (417)
T 4dxy_A           36 EDGYHEAWKKVQHPGIPDLIWTPF-TGGHWIATNGDTVKEVYSDP-TRFSSEVIFLPKEAGEKAQMVPTKMDPPEHTPYR  113 (417)
T ss_dssp             GGCHHHHHHHHSCTTCCSEEEESS-TTSEEEECSHHHHHHHHTCT-TTEESSCCSSSTTSSCSSCTTTTTCCTTTHHHHH
T ss_pred             hcChHHHHHHHHhhCCCCEEecCC-CCCEEEECCHHHHHHHHcCc-hhccCCCcccccccccccccCcccCCcHHHHHHH
Confidence            45789999999887753  33323 33478999999999999886 6777643221111 11112235677999999999


Q ss_pred             hhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhH-HHHHHhHhhhhhccCCCCCCCCCCCccchHHH
Q 012536           85 KLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVL-LKSSLDSIFKVGFGVELNSLSGSDDFGNQFTK  163 (461)
Q Consensus        85 ~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~  163 (461)
                      ++++++||+++++.+.+ .+++.++.+++.+..    ++.+|+...+ ..+...+++. ++|.....       ...+.+
T Consensus       114 rll~~~Fs~~~l~~~~~-~i~~~~~~lld~l~~----~g~~D~v~~~a~~l~~~vi~~-llg~~~~d-------~~~~~~  180 (417)
T 4dxy_A          114 KALDKGLNLAKIRKVED-KVREVASSLIDSFAA----RGECDFAAEYAELFPVHVFMA-LADLPLED-------IPVLSE  180 (417)
T ss_dssp             HHHHHHHCHHHHHTTHH-HHHHHHHHHHHHHHT----TSEEEHHHHTTTTHHHHHHHH-HTTCCGGG-------HHHHHH
T ss_pred             HHhhhhcCHHHHHHHHH-HHHHHHHHHHHHhhh----cCCeeeHHHHHhhhHHHHHHH-HcCCCHHH-------HHHHHh
Confidence            99999999999999986 678889999887753    3468876555 4455555554 56754321       122222


Q ss_pred             HhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccCCCCCC
Q 012536          164 AFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESEKDPES  243 (461)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~  243 (461)
                      ....+..            .....+.........+...+..++.++++++++.        ..+|+++.|+.+.. ++..
T Consensus       181 ~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~rr~~--------~~ddl~s~L~~~~~-~~~~  239 (417)
T 4dxy_A          181 YARQMTR------------PEGNTPEEMATDLEAGNNGFYAYVDPIIRARVGG--------DGDDLITLMVNSEI-NGER  239 (417)
T ss_dssp             HHHHHHS------------CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--------CCCSHHHHHHTCEE-TTEE
T ss_pred             hhhhhcc------------ccccChHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------Cccchhhhhccccc-cCCc
Confidence            2111110            0001111223345566777888888888776543        45789999887754 3467


Q ss_pred             CCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcChHHHHHH
Q 012536          244 MTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHYLHAAL  323 (461)
Q Consensus       244 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i  323 (461)
                      ++++++.+++..+++||+|||+.+++|++++|++||++++++++|...+.                           .++
T Consensus       240 ~~~~e~~~~~~~ll~AG~eTTa~~l~~~~~~L~~~P~~~~~l~~e~~~~~---------------------------~av  292 (417)
T 4dxy_A          240 IAHDKAQGLISLLLLGGLDTVVNFLSFFMIHLARHPELVAELRSDPLKLM---------------------------RGA  292 (417)
T ss_dssp             CCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTCHHHHHHHHHCHHHHH---------------------------HTH
T ss_pred             cchhHHHHHHHHHHhhcccchhhHHHHHHHHHHhCchhhhhhccCccccc---------------------------cce
Confidence            99999999999999999999999999999999999999999998854321                           122


Q ss_pred             HHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCcccccCC
Q 012536          324 SETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKFAAFQA  403 (461)
Q Consensus       324 ~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~~~Fg~  403 (461)
                       |.+|++++.+...|.+.+|.++ +|+.||+|+.|.++.+++||||++| +||++|+|+|+          ...++|||+
T Consensus       293 -ee~~~~~~~~~~~R~a~~d~~l-~G~~Ip~G~~V~~~~~a~~rDp~~f-~dP~~FdpeR~----------~~~~l~FG~  359 (417)
T 4dxy_A          293 -EEMFRRFPVVSEARMVAKDQEY-KGVFLKRGDMILLPTALHGLDDAAN-PEPWKLDFSRR----------SISHSTFGG  359 (417)
T ss_dssp             -HHHHHHSCCBEEEEEECSCEEE-TTEEECTTCEEEEETHHHHTCTTTS-SSTTSCCTTCS----------CCCCCTTCC
T ss_pred             -eeeeccccccccccccccceEe-cCccccCCCEEEEeehhhcCChhhC-CCccccCCCCC----------CCCCCCcCC
Confidence             4444455666677888888777 9999999999999999999999999 99999999994          345789999


Q ss_pred             CCCCCCChHHHHHHHHHHHHHhccce-EEEeecCCCccceeeeEEEeeCCceeeEE
Q 012536          404 GPRICPGKEFAYRQMKILAAVLLQFF-RFKLVDETKEATYRTMFTLHVDKGLHLYA  458 (461)
Q Consensus       404 G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  458 (461)
                      |+|.|+|++||++|++++|+.|+++| ++++++++.+.. .... +.....++|++
T Consensus       360 G~r~ClG~~LA~~E~~i~l~~Ll~rfp~~~l~~~~~~~~-~~~~-~~g~~~LPv~~  413 (417)
T 4dxy_A          360 GPHRCAGMHLARMEVIVTLEEWLKRIPEFSFKEGETPIY-HSGI-VAAVENVPLVW  413 (417)
T ss_dssp             GGGSCTTHHHHHHHHHHHHHHHHHHCSSCEECTTCCCEE-ECSS-BCEEECCEEEC
T ss_pred             CcccCccHHHHHHHHHHHHHHHHHhCCCceeCCCCCeee-cCCc-ccCceeeeEEe
Confidence            99999999999999999999999999 899986543322 2222 22233566654


No 77 
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00  E-value=1.5e-45  Score=337.10  Aligned_cols=294  Identities=15%  Similarity=0.115  Sum_probs=204.2

Q ss_pred             hhhhhHHHHHHHHhcCcEEEecCCCCeEEecChhhHHhhhhcCccccCCChhhH-HH-------hHhhccCceeeeCChh
Q 012536            8 FSRLFDYQTSLAKKYRTFRLLQPSCSEIFTTDPVNIEHILKTNFSNYGKGDYNW-NL-------MRDLFGDGIFAVDGDK   79 (461)
Q Consensus         8 ~~~~~~~~~~~~~~yg~~~~~~~~~~~v~v~dp~~~~~il~~~~~~f~~~~~~~-~~-------~~~~~g~~l~~~~~~~   79 (461)
                      ..+|+.++.+++++ +++...   .+++++++++.+++|+.++  .|++.+..+ ..       +.. .+.++++.|++.
T Consensus        58 ~~dp~~~~~~lr~~-pV~~~~---~~~~vv~~~~~v~~vl~d~--~f~~~~~~~~~~~~~~~~~~~~-~~~~l~~~dg~~  130 (381)
T 2yjn_B           58 DDDPQRRYRSMRES-GVRRSR---TETWVVADHATARQVLDDP--AFTRATGRTPEWMRAAGAPPAE-WAQPFRDVHAAS  130 (381)
T ss_dssp             CSCCHHHHHHHHHH-CEEECS---SSCEEECSHHHHHHHHHCS--SEESSCCCCCHHHHHHTCCHHH-HTHHHHHHHHCC
T ss_pred             ccCchHHHHHHHhC-CceeCC---CCEEEEcCHHHHHHHHcCC--CcCCCcccccccccccccccch-hhhhhhhCCchh
Confidence            35789999999988 666533   4689999999999999974  577653211 00       112 245677889999


Q ss_pred             HHHHHhhhcccCCHHHHHHhHHHHHHHHHHHHHHHHHHhcccCCceeHHHhH-HHHHHhHhhhhhccCCCCCCCCCCCcc
Q 012536           80 WRHQRKLASYEFSTKILRDFSSAVFRANAEKLTSKFSVAAAAKQAIDMQDVL-LKSSLDSIFKVGFGVELNSLSGSDDFG  158 (461)
Q Consensus        80 ~~~~R~~~~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~  158 (461)
                      |       +++|+     . . ..+++.++.+++.+.      +.+|+...+ ..+++++|+.+ ||.+.+.        
T Consensus       131 H-------~~~Ft-----~-~-~~i~~~~~~ll~~~~------g~~Dl~~~~a~~l~~~vi~~l-~G~~~~~--------  181 (381)
T 2yjn_B          131 W-------EGEVP-----D-V-GELAESFAGLLPGAG------ARLDLVGDFAWQVPVQGMTAV-LGAAGVL--------  181 (381)
T ss_dssp             C-------CSCCC-----C-C-SCHHHHTSTTSCC------------CCCCCCTHHHHHHHHTC------CC--------
T ss_pred             h-------hhccC-----C-h-HHHHHHHHHHHHhcc------CcchHHHHHHHHHHHHHHHHH-cCCCHHH--------
Confidence            9       67788     2 3 355677777777664      368998665 79999999995 9987642        


Q ss_pred             chHHHHhhhhhhHHHhhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccChhhHHHHHhhccC
Q 012536          159 NQFTKAFDDSNFIVYCRYVDVFWELKRYLNIGMEASLKRNIKLIDSFIFELIRCKREQMKNVELDRGKEDILSRFLLESE  238 (461)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ll~~~~  238 (461)
                      .++.+.+.....          +   . +.....+   +.                            .+.+..++.   
T Consensus       182 ~~~~~~~~~~~~----------~---~-~~~~~~~---~~----------------------------~~~~~~l~~---  213 (381)
T 2yjn_B          182 RGAAWDARVSLD----------A---Q-LSPQQLA---VT----------------------------EAAVAALPA---  213 (381)
T ss_dssp             HHHHHHHTTHHH----------H---T-TSCCCHH---HH----------------------------HHHHHHCC----
T ss_pred             HHHHHHHHHhcc----------C---C-CCHHHHH---HH----------------------------HHHHHHHHH---
Confidence            122222111000          0   0 0000000   00                            011111111   


Q ss_pred             CCCCCCCHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcChHHHHHHHHHHHHHHhhcCCCcchhhhhcccHHHhhcChH
Q 012536          239 KDPESMTDKYLRDITLNFIIAGKDTTANTLTWFFYMLCKHPLIQEKAALDVREATEAQGNLCADEFAKLVTEAALEKMHY  318 (461)
Q Consensus       239 ~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~~~~~~l~~lp~  318 (461)
                                  +++..+++||+|||+.+++|++++|++||++++++++|++                           |
T Consensus       214 ------------~~~~~ll~aG~eTt~~~l~~~l~~L~~~P~~~~~l~~e~~---------------------------~  254 (381)
T 2yjn_B          214 ------------DPALRALFAGAEMTANTVVDAVLAVSAEPGLAERIADDPA---------------------------A  254 (381)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC----------------------------
T ss_pred             ------------HHHHHHHHHhhhHHHHHHHHHHHHHHHCHHHHHHHhhCHH---------------------------H
Confidence                        5688899999999999999999999999999999997721                           7


Q ss_pred             HHHHHHHhhcCCCCCCCCCccccccccccCCeeecCCCEEEEehhhhccCccCccCCCCCcccCCcCCCCccCCCCCCcc
Q 012536          319 LHAALSETLRLYPAVPVDGKNAAEDDILPDGFKVKKGDGVNYMTYAMGRMTYIWGEDAEEFRPERWLVNGVFRSESPYKF  398 (461)
Q Consensus       319 l~a~i~E~lRl~~~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R~~~~~~~~~~~~~~~  398 (461)
                      +++||+|++|++|+++...|.+.+|.++ +|+.||||+.|.++.+++||||++| +||++|+|+||++         ..+
T Consensus       255 l~~~i~E~LR~~pp~~~~~R~a~~d~~l-~G~~Ip~G~~V~~~~~~~~rDp~~~-~dp~~F~p~R~~~---------~~~  323 (381)
T 2yjn_B          255 AQRTVAEVLRLHPALHLERRTATAEVRL-GEHVIGEGEEVVVVVAAANRDPEVF-AEPDRLDVDRPDA---------DRA  323 (381)
T ss_dssp             -HHHHHHHHHHSCSCSEEEEEESSCEES-SSCEECTTCEEEEEHHHHTTCTTTS-SSTTSCCSSCSCC---------CCC
T ss_pred             HHHHhCeeeeecCCCcceeEEECCCeEE-CCEEECCCCEEEeCHHHHcCCcccC-CCccccCCCCCCC---------CCc
Confidence            9999999999999999878888888777 9999999999999999999999999 9999999999963         358


Q ss_pred             cccCCCCCCCCChHHHHHHHHHHHHHhccce-EEEeecC
Q 012536          399 AAFQAGPRICPGKEFAYRQMKILAAVLLQFF-RFKLVDE  436 (461)
Q Consensus       399 ~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~  436 (461)
                      +|||+| |.|+|++||.+|++++++.|+++| +++++++
T Consensus       324 l~FG~G-h~C~G~~lA~~e~~~~l~~ll~~~p~~~l~~~  361 (381)
T 2yjn_B          324 LSAHRG-HPGRLEELVTALATAALRAAAKALPGLTPSGP  361 (381)
T ss_dssp             CC-----CCSSHHHHHHHHHHHHHHHTTTTCCC-----C
T ss_pred             cCCCCC-CCCchHHHHHHHHHHHHHHHHHhCCCcEECCC
Confidence            999999 999999999999999999999999 9999764


No 78 
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=53.85  E-value=11  Score=17.61  Aligned_cols=13  Identities=15%  Similarity=0.302  Sum_probs=10.5

Q ss_pred             HHHHHHHHHHHHH
Q 012536          280 LIQEKAALDVREA  292 (461)
Q Consensus       280 ~~~~~lr~Ei~~~  292 (461)
                      ..|.|+|.|+++-
T Consensus         8 nlqkkirkelkqr   20 (26)
T 1m46_B            8 NLQKKIRKELKQR   20 (26)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            5789999998863


No 79 
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=22.43  E-value=1.2e+02  Score=17.33  Aligned_cols=14  Identities=7%  Similarity=0.190  Sum_probs=8.9

Q ss_pred             hHHHHHHHHHHHHH
Q 012536          279 PLIQEKAALDVREA  292 (461)
Q Consensus       279 p~~~~~lr~Ei~~~  292 (461)
                      .|+++.+|.|+..+
T Consensus        14 qEIL~E~RkElqK~   27 (45)
T 1use_A           14 QELLEEVKKELQKV   27 (45)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            45666677776655


No 80 
>2rqw_B 24-meric peptide from serine/threonine-protein KI STE20; BEM1P, STE20P, SH3CI, PRR, cytoplasm, cytoskeleton, SH3 DOMA cycle; NMR {Saccharomyces cerevisiae}
Probab=21.74  E-value=33  Score=16.72  Aligned_cols=9  Identities=33%  Similarity=0.453  Sum_probs=7.0

Q ss_pred             CCCcccCCc
Q 012536          376 AEEFRPERW  384 (461)
Q Consensus       376 p~~F~P~R~  384 (461)
                      -++|+|.|=
T Consensus         5 ~eKFiPsRP   13 (26)
T 2rqw_B            5 NGKFIPSRP   13 (26)
T ss_dssp             CCSSCCSSC
T ss_pred             ccccccCCC
Confidence            478999993


No 81 
>1nrj_A Signal recognition particle receptor alpha subunit homolog; transmembrane, endoplasmic reticulum, GTP-binding; HET: GTP; 1.70A {Saccharomyces cerevisiae} SCOP: d.110.4.4
Probab=20.47  E-value=24  Score=26.11  Aligned_cols=23  Identities=26%  Similarity=0.401  Sum_probs=21.0

Q ss_pred             CCCCChHHHHHHHHHHHHHhccc
Q 012536          406 RICPGKEFAYRQMKILAAVLLQF  428 (461)
Q Consensus       406 r~C~G~~~a~~~~~~~l~~ll~~  428 (461)
                      -.|+|++||..++-.++..|+..
T Consensus        18 yn~l~kKf~e~qiN~fIS~Lits   40 (158)
T 1nrj_A           18 YNCLGKKFSEIQINSFISQLITS   40 (158)
T ss_dssp             EETTSCCCCHHHHHHHHHHHHHS
T ss_pred             ecccCcchHHHHHHHHHHHHhcC
Confidence            38999999999999999999973


Done!