Query 012538
Match_columns 461
No_of_seqs 270 out of 1605
Neff 7.1
Searched_HMMs 46136
Date Fri Mar 29 03:41:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012538.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012538hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02893 Cellulose synthase-li 100.0 1E-118 2E-123 960.5 37.6 458 1-460 269-730 (734)
2 PF03552 Cellulose_synt: Cellu 100.0 1E-120 3E-125 967.7 22.8 455 1-460 171-705 (720)
3 PLN02189 cellulose synthase 100.0 7E-118 1E-122 970.9 34.0 453 1-460 503-1019(1040)
4 PLN02638 cellulose synthase A 100.0 4E-118 9E-123 975.2 31.0 454 1-460 521-1058(1079)
5 PLN02400 cellulose synthase 100.0 1E-117 3E-122 971.7 28.9 454 1-460 528-1063(1085)
6 PLN02436 cellulose synthase A 100.0 4E-117 9E-122 963.8 32.0 453 1-460 537-1073(1094)
7 PLN02195 cellulose synthase A 100.0 2E-116 5E-121 954.2 34.0 453 1-460 424-954 (977)
8 PLN02190 cellulose synthase-li 100.0 3E-116 7E-121 936.0 28.4 449 1-460 257-756 (756)
9 PLN02248 cellulose synthase-li 100.0 3E-115 7E-120 951.5 31.2 453 1-460 590-1117(1135)
10 PLN02915 cellulose synthase A 100.0 5E-115 1E-119 948.3 32.9 455 1-460 459-1023(1044)
11 PRK11498 bcsA cellulose syntha 100.0 2.4E-57 5.2E-62 500.7 35.2 354 10-439 323-684 (852)
12 TIGR03030 CelA cellulose synth 100.0 3.3E-56 7.2E-61 492.2 37.9 352 9-439 211-571 (713)
13 PRK05454 glucosyltransferase M 100.0 1.6E-28 3.5E-33 268.6 34.9 213 8-271 200-420 (691)
14 cd04191 Glucan_BSP_ModH Glucan 100.0 5.1E-29 1.1E-33 243.9 15.6 170 10-224 77-253 (254)
15 PRK14583 hmsR N-glycosyltransf 99.9 1E-25 2.2E-30 237.5 29.4 164 11-230 140-308 (444)
16 COG1215 Glycosyltransferases, 99.9 1.1E-26 2.3E-31 242.8 18.5 167 9-229 120-291 (439)
17 PRK11204 N-glycosyltransferase 99.9 2.5E-24 5.3E-29 224.9 28.1 164 11-230 119-287 (420)
18 TIGR03111 glyc2_xrt_Gpos1 puta 99.9 3.3E-24 7.1E-29 225.8 24.8 212 10-279 115-341 (439)
19 PRK14716 bacteriophage N4 adso 99.9 8.3E-23 1.8E-27 216.7 26.1 195 11-253 134-355 (504)
20 PRK11234 nfrB bacteriophage N4 99.9 5.8E-22 1.2E-26 218.2 22.7 170 11-228 131-335 (727)
21 cd06437 CESA_CaSu_A2 Cellulose 99.9 3E-22 6.5E-27 191.9 13.6 157 10-222 71-232 (232)
22 cd06421 CESA_CelA_like CESA_Ce 99.9 6.9E-22 1.5E-26 188.3 13.7 164 8-225 66-233 (234)
23 cd06435 CESA_NdvC_like NdvC_li 99.9 1.1E-21 2.3E-26 188.0 14.7 166 10-229 66-235 (236)
24 cd06427 CESA_like_2 CESA_like_ 99.9 2.3E-21 4.9E-26 187.4 15.6 165 11-229 69-237 (241)
25 PF13632 Glyco_trans_2_3: Glyc 99.8 7.2E-20 1.6E-24 170.5 15.0 137 33-222 1-143 (193)
26 PF13641 Glyco_tranf_2_3: Glyc 99.8 5.6E-21 1.2E-25 181.9 4.3 152 13-221 73-228 (228)
27 cd04190 Chitin_synth_C C-termi 99.8 2.6E-19 5.7E-24 173.9 11.1 171 17-223 64-242 (244)
28 PRK15489 nfrB bacteriophage N4 99.8 3.6E-17 7.7E-22 178.7 24.5 176 7-227 135-342 (703)
29 cd04192 GT_2_like_e Subfamily 99.7 2.1E-17 4.6E-22 156.4 13.9 156 11-221 67-229 (229)
30 cd06434 GT2_HAS Hyaluronan syn 99.7 9.3E-18 2E-22 160.2 11.5 168 10-223 61-233 (235)
31 cd02520 Glucosylceramide_synth 99.7 2.2E-17 4.8E-22 154.5 9.9 121 13-221 73-195 (196)
32 TIGR03472 HpnI hopanoid biosyn 99.7 8.4E-17 1.8E-21 166.1 13.0 155 12-223 112-273 (373)
33 COG2943 MdoH Membrane glycosyl 99.7 1.6E-14 3.5E-19 148.6 26.5 209 7-265 219-433 (736)
34 PF13506 Glyco_transf_21: Glyc 99.6 3.6E-15 7.9E-20 138.2 13.1 154 10-220 14-175 (175)
35 cd06439 CESA_like_1 CESA_like_ 99.6 5.9E-15 1.3E-19 142.6 13.1 155 11-224 94-250 (251)
36 cd02525 Succinoglycan_BP_ExoA 99.5 4.3E-14 9.4E-19 135.4 11.9 161 11-229 66-234 (249)
37 cd06436 GlcNAc-1-P_transferase 99.4 8.8E-13 1.9E-17 123.1 10.3 105 11-121 63-178 (191)
38 TIGR03469 HonB hopene-associat 99.4 8.2E-12 1.8E-16 129.5 17.7 156 11-219 113-279 (384)
39 cd06438 EpsO_like EpsO protein 99.3 4.7E-12 1E-16 117.0 8.3 104 10-120 60-169 (183)
40 PF03142 Chitin_synth_2: Chiti 99.2 9.4E-10 2E-14 117.1 19.6 168 29-226 200-378 (527)
41 cd04195 GT2_AmsE_like GT2_AmsE 99.1 4E-10 8.7E-15 104.8 9.0 126 12-195 66-195 (201)
42 cd04184 GT2_RfbC_Mx_like Myxoc 99.0 8.3E-10 1.8E-14 102.6 8.8 123 11-195 68-195 (202)
43 cd06433 GT_2_WfgS_like WfgS an 98.9 3.9E-09 8.5E-14 97.1 9.9 128 11-196 60-189 (202)
44 cd04186 GT_2_like_c Subfamily 98.9 4.9E-09 1.1E-13 93.5 9.6 99 11-195 59-159 (166)
45 cd02522 GT_2_like_a GT_2_like_ 98.9 6.7E-09 1.4E-13 97.9 11.0 121 12-192 58-178 (221)
46 KOG2571 Chitin synthase/hyalur 98.9 3E-08 6.6E-13 109.4 16.2 167 14-221 426-596 (862)
47 cd02526 GT2_RfbF_like RfbF is 98.9 2.5E-09 5.3E-14 102.1 6.5 134 12-195 58-198 (237)
48 cd06420 GT2_Chondriotin_Pol_N 98.8 2.1E-08 4.4E-13 91.7 10.6 107 12-195 65-174 (182)
49 cd02510 pp-GalNAc-T pp-GalNAc- 98.8 2.2E-08 4.8E-13 100.0 11.2 132 11-196 68-220 (299)
50 cd06442 DPM1_like DPM1_like re 98.7 8.5E-08 1.8E-12 90.5 11.7 132 10-195 62-197 (224)
51 PLN02726 dolichyl-phosphate be 98.7 1.8E-07 4E-12 90.5 12.2 131 11-195 78-212 (243)
52 TIGR01556 rhamnosyltran L-rham 98.6 5.7E-08 1.2E-12 96.0 7.7 135 11-195 55-195 (281)
53 PF10111 Glyco_tranf_2_2: Glyc 98.6 1.5E-07 3.3E-12 93.6 10.1 133 13-195 75-216 (281)
54 cd04196 GT_2_like_d Subfamily 98.6 1.4E-07 3.1E-12 88.0 8.9 133 10-196 63-198 (214)
55 cd06913 beta3GnTL1_like Beta 1 98.6 6.5E-07 1.4E-11 84.8 13.2 132 12-196 70-204 (219)
56 cd04185 GT_2_like_b Subfamily 98.6 2.6E-07 5.5E-12 86.2 9.8 105 12-196 62-168 (202)
57 cd06423 CESA_like CESA_like is 98.5 5.2E-08 1.1E-12 86.3 3.3 103 10-121 62-169 (180)
58 cd04188 DPG_synthase DPG_synth 98.4 2.3E-06 5E-11 80.6 10.9 43 12-59 68-110 (211)
59 cd00761 Glyco_tranf_GTA_type G 98.2 4.1E-06 8.8E-11 72.2 7.6 94 9-191 60-155 (156)
60 PRK10063 putative glycosyl tra 98.1 2E-05 4.4E-10 77.0 11.8 125 11-197 67-192 (248)
61 COG1216 Predicted glycosyltran 98.1 5.5E-06 1.2E-10 83.3 6.8 135 11-196 66-215 (305)
62 cd04179 DPM_DPG-synthase_like 98.1 7.2E-06 1.6E-10 74.8 6.4 100 12-120 65-165 (185)
63 PRK10073 putative glycosyl tra 98.0 1.6E-05 3.4E-10 81.0 9.2 162 11-226 70-243 (328)
64 PF00535 Glycos_transf_2: Glyc 97.9 3.4E-06 7.5E-11 74.5 1.7 102 12-120 64-167 (169)
65 cd04187 DPM1_like_bac Bacteria 97.9 3.6E-05 7.8E-10 70.4 7.9 97 11-121 65-162 (181)
66 PRK10018 putative glycosyl tra 97.8 0.00017 3.7E-09 71.8 11.1 44 10-58 69-112 (279)
67 PTZ00260 dolichyl-phosphate be 97.4 0.0015 3.2E-08 66.8 12.0 54 11-70 147-200 (333)
68 KOG2547 Ceramide glucosyltrans 97.3 0.0001 2.2E-09 74.4 1.4 150 12-219 156-313 (431)
69 PRK13915 putative glucosyl-3-p 97.2 0.0037 8E-08 63.1 11.6 51 11-70 100-152 (306)
70 PF02364 Glucan_synthase: 1,3- 96.4 0.098 2.1E-06 58.7 16.2 194 3-249 263-482 (817)
71 PRK10714 undecaprenyl phosphat 96.4 0.26 5.7E-06 50.1 18.1 42 11-57 75-116 (325)
72 cd02511 Beta4Glucosyltransfera 94.3 0.091 2E-06 50.2 6.0 45 10-59 55-99 (229)
73 cd00899 b4GalT Beta-4-Galactos 93.1 0.2 4.3E-06 48.1 6.0 142 12-225 48-199 (219)
74 PF13712 Glyco_tranf_2_5: Glyc 85.6 1 2.2E-05 43.2 4.2 49 12-68 40-89 (217)
75 KOG2978 Dolichol-phosphate man 83.5 4.3 9.3E-05 38.1 7.0 94 13-120 75-175 (238)
76 PF02709 Glyco_transf_7C: N-te 83.1 1 2.2E-05 36.0 2.6 30 166-195 35-67 (78)
77 cd02514 GT13_GLCNAC-TI GT13_GL 80.2 4.6 9.9E-05 41.4 6.7 82 17-120 88-173 (334)
78 PF13896 Glyco_transf_49: Glyc 75.1 4.3 9.3E-05 41.2 4.8 45 19-68 120-164 (317)
79 COG4092 Predicted glycosyltran 74.6 6.2 0.00013 39.0 5.4 64 15-79 79-143 (346)
80 COG0463 WcaA Glycosyltransfera 71.4 6.6 0.00014 34.1 4.6 36 10-50 67-102 (291)
81 PF02434 Fringe: Fringe-like; 67.8 10 0.00022 37.1 5.5 27 29-56 85-111 (252)
82 KOG0916 1,3-beta-glucan syntha 63.4 1.9E+02 0.004 35.3 14.9 192 3-247 1039-1244(1679)
83 PRK09382 ispDF bifunctional 2- 60.1 26 0.00057 36.5 7.0 41 14-58 83-123 (378)
84 PLN03153 hypothetical protein; 57.1 38 0.00082 36.7 7.6 30 28-59 208-237 (537)
85 cd02503 MobA MobA catalyzes th 49.5 69 0.0015 28.8 7.3 41 11-56 68-109 (181)
86 TIGR02665 molyb_mobA molybdopt 43.3 1E+02 0.0022 27.8 7.5 41 12-57 73-114 (186)
87 cd04182 GT_2_like_f GT_2_like_ 41.8 58 0.0013 29.1 5.5 43 12-57 74-117 (186)
88 PF01762 Galactosyl_T: Galacto 41.2 60 0.0013 30.0 5.6 37 16-56 69-105 (195)
89 PRK00317 mobA molybdopterin-gu 40.5 60 0.0013 29.7 5.5 41 13-58 75-116 (193)
90 PF12804 NTP_transf_3: MobA-li 38.2 89 0.0019 27.4 6.1 55 12-72 70-125 (160)
91 KOG2977 Glycosyltransferase [G 35.9 52 0.0011 33.0 4.3 44 10-57 141-186 (323)
92 TIGR03310 matur_ygfJ molybdenu 32.9 82 0.0018 28.4 5.1 42 13-58 75-117 (188)
93 PF04724 Glyco_transf_17: Glyc 31.1 60 0.0013 33.6 4.2 35 16-52 165-199 (356)
94 PRK02726 molybdopterin-guanine 30.3 2.2E+02 0.0048 26.4 7.6 42 13-58 79-120 (200)
95 PLN02728 2-C-methyl-D-erythrit 30.1 1.7E+02 0.0036 28.7 6.9 41 15-57 104-144 (252)
96 PF15050 SCIMP: SCIMP protein 29.6 94 0.002 27.0 4.3 39 314-353 2-45 (133)
97 cd04181 NTP_transferase NTP_tr 27.0 1.2E+02 0.0026 27.9 5.1 42 12-59 81-122 (217)
98 cd02540 GT2_GlmU_N_bac N-termi 26.6 2.2E+02 0.0049 26.4 7.1 44 12-58 73-117 (229)
99 cd02524 G1P_cytidylyltransfera 26.1 1.4E+02 0.0031 28.6 5.7 40 13-58 103-143 (253)
100 PRK04987 fumarate reductase su 25.5 4.7E+02 0.01 23.1 8.2 69 313-400 14-85 (130)
101 COG4858 Uncharacterized membra 24.2 3.4E+02 0.0073 25.6 7.2 59 383-443 101-161 (226)
102 PF13704 Glyco_tranf_2_4: Glyc 22.2 56 0.0012 26.2 1.7 27 14-43 58-84 (97)
103 PF05637 Glyco_transf_34: gala 21.7 80 0.0017 30.6 2.9 42 13-59 62-103 (239)
104 PHA02688 ORF059 IMV protein VP 21.6 1.5E+02 0.0033 30.1 4.8 45 29-77 115-159 (323)
105 KOG4440 NMDA selective glutama 20.3 2.7E+02 0.0058 31.1 6.6 19 406-424 637-655 (993)
No 1
>PLN02893 Cellulose synthase-like protein
Probab=100.00 E-value=9.9e-119 Score=960.47 Aligned_cols=458 Identities=39% Similarity=0.738 Sum_probs=429.5
Q ss_pred CCccCCCCCCCCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCc
Q 012538 1 MAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKN 80 (461)
Q Consensus 1 v~Rekrp~~~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~ 80 (461)
|||||||+++||+||||||+++|+|+.+||||||+|+||||++|+|++++++||||+||+.++++|+||+||+|+|.+++
T Consensus 269 vsReKrp~~~Hh~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n~p~~l~~amcff~Dp~~~~~vafVQfPQ~F~~i~~~ 348 (734)
T PLN02893 269 VSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSNDPQTPLRALCYLLDPSMDPKLGYVQFPQIFHGINKN 348 (734)
T ss_pred EeCCCCCCCCcccccchHHHHHHhhcccCCCCEEEEecCCcCCCchhHHHHHHHHhcCCCcCCceEEEeCcccccCCCcC
Confidence 69999999999999999999999999999999999999999998999999999999999889999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHhhcCCccccccceeEechhhcCCCCC--cccccc-c-cccCCCCcChHHHHHHhchhccccc
Q 012538 81 DLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYP--KDYRNI-N-EAKNNDNRSVDELEKASKVLASCSY 156 (461)
Q Consensus 81 d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~--~~~~~~-~-~~~~~~~~~~~~~~~~a~~~~~c~y 156 (461)
|+|+|++++||+++++|+||++||+||||||+|||+||+|.+.. .+..++ . ......++.+++++++|++|+||.|
T Consensus 349 D~y~~~~~vff~~~~~glDG~~gp~y~GTGc~~RR~al~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~sC~y 428 (734)
T PLN02893 349 DIYAGELKRLFQINMIGMDGLAGPNYVGTGCFFRRRVFYGGPSSLILPEIPELNPDHLVDKSIKSQEVLALAHHVAGCNY 428 (734)
T ss_pred CCCcchhHHHHHHHhhcccccCCceeeccceEEEHHHhcCCCccccchhhhhcccccccccccchHHHHHHhhhcccccc
Confidence 99999999999999999999999999999999999999987431 011110 0 1112345578889999999999999
Q ss_pred ccccccccccCCCCCCccchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHHHHHHhhhhhcchhHHHHHhhccccccc
Q 012538 157 EKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYG 236 (461)
Q Consensus 157 e~~t~wg~~~G~~~~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G~lqi~~~~~~p~~~~ 236 (461)
|++|.||+++||.|+|+|||++||++||++||||+||+|+++++.|++|+|+.++++||+||++|++||+++++||+++|
T Consensus 429 e~~t~WG~~~G~~ygsvtED~~Tg~~lh~~GWrSvY~~p~~~af~G~aP~~l~~~l~Q~~RWa~G~lqI~~s~~nPl~~g 508 (734)
T PLN02893 429 ENQTNWGSKMGFRYGSLVEDYYTGYRLQCEGWKSIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFG 508 (734)
T ss_pred ccCCccccccceEeccccccHHHHHHHHhcCCcEEecCCCchhhccCCCCCHHHHHHHHHHHHhhhHHHHhhccCchhhc
Confidence 99999999999999999999999999999999999999877899999999999999999999999999999999999987
Q ss_pred cCcccccchhhhhhhhhhhhhHHHHHHHHHHhHHhHhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCcccccc
Q 012538 237 HGKIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWW 316 (461)
Q Consensus 237 ~~~l~~~qrl~y~~~~~~~~~~~~~~~~~~~P~l~l~~g~~~~~~~~~~~~l~f~~~~~~~~~~~~l~~~~~G~~~~~ww 316 (461)
.++|++.||++|++.++|++.++|+++|+++|++||++|++++|+.+.+|+++|+++++++++++++|++++|.++++||
T Consensus 509 ~~~L~~~Qrl~Y~~~~~~~~~slp~liY~~~P~l~Ll~g~~i~p~~s~~~f~~yi~l~~s~~~~~~lE~~~sG~t~~~WW 588 (734)
T PLN02893 509 VKSIGLLMGLGYAHYAFWPIWSIPITIYAFLPQLALLNGVSIFPKASDPWFFLYIFLFLGAYGQDLLDFLLSGGTIQRWW 588 (734)
T ss_pred ccCCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcccccccHHHHHHHHHHHHHHHHHHHHHHhccCccHhhhc
Confidence 78999999999999999999999999999999999999999999998999999998889999999999999999999999
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHhcCCccceEEecccccchhhhHHHhhhhhhcccchhHHHHHHHHHHHHHHHHHHH
Q 012538 317 NLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGF 396 (461)
Q Consensus 317 ~~qr~w~i~~~~~~~~~~~~~llk~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~p~~ip~~~l~~l~l~al~~g~ 396 (461)
|+||+|+|.++++++++++++++|+||+++.+|+||+|+.+++++++|++|.|+|+.++|+++|+++++++|++|+++|+
T Consensus 589 n~qr~w~I~~~ss~l~a~l~~iLk~lg~s~~~F~VT~K~~~~~~~~~y~~~~f~f~~~spl~ip~ttl~llNl~a~v~Gi 668 (734)
T PLN02893 589 NDQRMWMIRGLSSFLFGLVEFLLKTLGISTFGFNVTSKVVDEEQSKRYEQGIFEFGVSSPMFLPLTTAAIINLVSFLWGI 668 (734)
T ss_pred chheeeehHHHHHHHHHHHHHHHHHhcccCCceeecCCCcccccccccccceeeecccchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988777889999999999889999999999999999999999
Q ss_pred HHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeeehhhHHHHHHHhhcccc
Q 012538 397 IDIIFLDFGALGNLMCQIILCGLMVLVNVPIYEALFIRKDKGCMPFSVMFKSMFLASLACLLPY 460 (461)
Q Consensus 397 ~~~~~~~~~~~~~~~~~l~~~~~~v~~~~p~~~~l~~Rk~~~~~P~~~~~~s~~~~~~~~~~~~ 460 (461)
++++.+ +.++.+++|++||+|+|++++||++|++.|||||++|++++++|++|+.++|+++.
T Consensus 669 ~~~~~~--~~~~~~~~~~~~~~~~v~~~~P~~~gl~~r~dkg~~P~~v~~~s~~l~~~~~~~~~ 730 (734)
T PLN02893 669 AQIFRQ--RNLEGLFLQMFLAGFAVVNCWPIYEAMVLRTDDGKLPVKITLISIVLAWALYLASS 730 (734)
T ss_pred HHHHhC--CchhHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCccHHHHHHHHHHHHHHHHh
Confidence 999874 45788999999999999999999999999999999999999999999999998754
No 2
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=100.00 E-value=1.4e-120 Score=967.73 Aligned_cols=455 Identities=44% Similarity=0.785 Sum_probs=422.9
Q ss_pred CCccCCCCCCCCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCc
Q 012538 1 MAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKN 80 (461)
Q Consensus 1 v~Rekrp~~~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~ 80 (461)
|||||||+++||+||||||+++|+|+++||+|||+++||||++|||+.++++||||+||+.++++||||+||+|+|++++
T Consensus 171 vsREKrp~~~Hh~KAGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~d~~~g~~~~~vQfpq~f~~i~~~ 250 (720)
T PF03552_consen 171 VSREKRPGYPHHFKAGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFMDPKIGKKIAFVQFPQRFDGIDKN 250 (720)
T ss_pred EeccCCCCCCchhhhcccccccccceeecCCCEEEEecccccccchHHHHHHHHhhccCCCCCeeEEEeCCceeCCCCcC
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHhhcCCccccccceeEechhhcCCCCCccc----------------------------c----
Q 012538 81 DLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDY----------------------------R---- 128 (461)
Q Consensus 81 d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~----------------------------~---- 128 (461)
|+|+|++++||++.++|+||++||+|+||||+|||+||+|..+.... .
T Consensus 251 d~y~~~~~~~~~~~~~g~dG~~gp~y~Gtgc~~rR~al~g~~~~~~~~~~~~~~~~~~~c~~~~k~~~~~~~~~~~~~~~ 330 (720)
T PF03552_consen 251 DRYGNQNRVFFDINMRGLDGLQGPFYVGTGCFFRREALYGFDPPRYEKDPEKTCCCCSCCFGRRKKKKSKKKPKKRASKR 330 (720)
T ss_pred CCCCccceeeeeccccccccCCCceeeecCcceechhhhCCCCCchhcccCcceeeeecccCCcccccccccchhccccc
Confidence 99999999999999999999999999999999999999997431100 0
Q ss_pred -c---------c-cc------------------------c------------cCCCCcChHHHHHHhchhcccccccccc
Q 012538 129 -N---------I-NE------------------------A------------KNNDNRSVDELEKASKVLASCSYEKNTH 161 (461)
Q Consensus 129 -~---------~-~~------------------------~------------~~~~~~~~~~~~~~a~~~~~c~ye~~t~ 161 (461)
+ + ++ + ..+.+.+.+++++||++|+||+||++|+
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~~~~~~~~~~~~L~EA~~V~sC~YE~~T~ 410 (720)
T PF03552_consen 331 RESSSPIFALEDIEEGAEGSDEERSSLMSQKELEKKFGQSPEFIASTLMAQGGVPRSPSPASLLEEAIHVASCGYEDKTE 410 (720)
T ss_pred cccccccccccccccccccchhhhhhcchhHHHHHHhcCCHHHHHHHHHHhcCCCCCCChHHHHHHHHHHhcCCccccCC
Confidence 0 0 00 0 0134557788999999999999999999
Q ss_pred cccccCCCCCCccchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHHHHHHhhhhhcchhHHHHHhhccccccc-cCcc
Q 012538 162 WGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYG-HGKI 240 (461)
Q Consensus 162 wg~~~G~~~~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G~lqi~~~~~~p~~~~-~~~l 240 (461)
||+++||.|+++|||+.||++||++||||+||+|+++||.|.||+||.+.+.|++||+.|++||+++|+||+++| .++|
T Consensus 411 WGkevGwiYGSvtEDv~TG~rmH~rGWrSvYc~p~r~AF~G~AP~nL~d~L~Q~~RWA~GslEI~fSr~~Pl~~g~~~rL 490 (720)
T PF03552_consen 411 WGKEVGWIYGSVTEDVLTGFRMHCRGWRSVYCNPKRPAFLGSAPINLSDRLHQVKRWATGSLEIFFSRHCPLWYGYGGRL 490 (720)
T ss_pred cccccceEEEecccccccceeEeeCceeeEEeccccchhcccCCCChhhhceeeeeEeeeeEeeehhcCCchhccCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999987 5799
Q ss_pred cccchhhhhhhhhhhhhHHHHHHHHHHhHHhHhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCccccccchhh
Q 012538 241 KFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQR 320 (461)
Q Consensus 241 ~~~qrl~y~~~~~~~~~~~~~~~~~~~P~l~l~~g~~~~~~~~~~~~l~f~~~~~~~~~~~~l~~~~~G~~~~~ww~~qr 320 (461)
+++||++|+++++|+++++|.++|+++|++||++|++++|+.+++|+++|+++++++++++++|++|+|.++++|||+||
T Consensus 491 ~~lQrLaY~~~~~ypl~Sipll~Y~~lPalcLLtG~~i~Pk~s~~~~~~f~~lf~~~~~~~llE~~wsG~si~~WWrnQq 570 (720)
T PF03552_consen 491 KFLQRLAYLNYMLYPLTSIPLLCYCFLPALCLLTGIFIFPKVSSPWFIYFLALFVSIYAYSLLEFRWSGVSIREWWRNQQ 570 (720)
T ss_pred cHHHHHHHHHHhhhHHHHHHHHHHHHhHHHHhhCCCcccCccccchhHHHHHHHHHHHHHHHHHHHhccCcHHHhhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCccceEEecccccchhhhHHHhhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHh
Q 012538 321 MLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGFIDII 400 (461)
Q Consensus 321 ~w~i~~~~~~~~~~~~~llk~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~p~~ip~~~l~~l~l~al~~g~~~~~ 400 (461)
||+|.+++++++|++++++|+||+++.+|.||+|..+++.++.+ +.|+|+ ++++++|+++++++|++|+++|+.+.+
T Consensus 571 ~W~I~~tSa~LfAvl~~iLK~lg~s~t~F~VTsK~~dde~~~~~--ely~f~-wS~LfiP~tTllilNLva~v~Gi~r~i 647 (720)
T PF03552_consen 571 FWMIGGTSAHLFAVLQGILKVLGGSETSFTVTSKVSDDEDDKYA--ELYIFK-WSPLFIPPTTLLILNLVAFVVGISRAI 647 (720)
T ss_pred eeeehhhHHHHHHHHHHHHHHHcCCccceeeccccccccccccc--cccccc-ccchhhHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999875444433 456665 378999999999999999999999998
Q ss_pred hcccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeeehhhHHHHHHHhhcccc
Q 012538 401 FLDFGALGNLMCQIILCGLMVLVNVPIYEALFIRKDKGCMPFSVMFKSMFLASLACLLPY 460 (461)
Q Consensus 401 ~~~~~~~~~~~~~l~~~~~~v~~~~p~~~~l~~Rk~~~~~P~~~~~~s~~~~~~~~~~~~ 460 (461)
.++.++|+++++++++++|+|+++|||++||++||+ |+|+++++||+++++++|++++
T Consensus 648 ~~g~~~~g~l~g~lf~~~wVvv~lyPf~kGL~~R~~--r~P~~v~v~S~lla~i~~llwv 705 (720)
T PF03552_consen 648 NSGYGSWGPLLGQLFFSFWVVVHLYPFLKGLFGRKD--RIPTSVIVWSVLLASIFSLLWV 705 (720)
T ss_pred ccCCCchhHHHHHHHHHHHHHHHhhHHHHhhhcccC--CcceeehHHHHHHHHHHHHHhe
Confidence 866778999999999999999999999999999987 4999999999999999999875
No 3
>PLN02189 cellulose synthase
Probab=100.00 E-value=6.5e-118 Score=970.93 Aligned_cols=453 Identities=35% Similarity=0.639 Sum_probs=420.2
Q ss_pred CCccCCCCCCCCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCc
Q 012538 1 MAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKN 80 (461)
Q Consensus 1 v~Rekrp~~~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~ 80 (461)
|||||||+++||+||||||+++|+|+++||+|||+|+||||++|||++++++||||+||+.++++||||+||+|+|++++
T Consensus 503 VSREKrPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY~Nns~alr~AMCfflDp~~g~~vAfVQFPQrF~~i~k~ 582 (1040)
T PLN02189 503 VSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQIGRKVCYVQFPQRFDGIDTH 582 (1040)
T ss_pred EeccCCCCCCcccchhhHHHHHHHhhhccCCCeEEEccCccccCchHHHHHhhhhhcCCccCceeEEEeCccccCCCCCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHhhcCCccccccceeEechhhcCCCCCcc--------------------------c----cc-
Q 012538 81 DLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKD--------------------------Y----RN- 129 (461)
Q Consensus 81 d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~--------------------------~----~~- 129 (461)
|+|+|++++||+++++|+||+|||+||||||+|||+||+|..+.+. . ..
T Consensus 583 D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALyG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (1040)
T PLN02189 583 DRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYDPPKGPKRPKMVTCDCCPCFGRRKKKHAKNGLNGEVAAL 662 (1040)
T ss_pred CccCCccceeeeeeecccccCCCccccccCceeeeeeeeccCcccccccccccccchhhhcccccccccccccccccccc
Confidence 9999999999999999999999999999999999999998733110 0 00
Q ss_pred -----c------------cc--c------------cCCCCcChHHHHHHhchhcccccccccccccccCCCCCCccchHH
Q 012538 130 -----I------------NE--A------------KNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVV 178 (461)
Q Consensus 130 -----~------------~~--~------------~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~G~~~~~vtED~~ 178 (461)
+ ++ + ..+.....+++++||++|+||+||++|+||+++||.|+|+|||+.
T Consensus 663 ~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTED~~ 742 (1040)
T PLN02189 663 GGMESDKEMLMSQMNFEKKFGQSAIFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDIL 742 (1040)
T ss_pred cccchhhhhhhhhhhhHhhhccchhhhhhhhhhhcCCCCCCCcHHHHHHHHHhhccccccCCchhhccCeeccccccHHH
Confidence 0 00 0 012334567899999999999999999999999999999999999
Q ss_pred HHHHHHhcCCeEEEeCCCCCceecccCCCHHHHHHhhhhhcchhHHHHHhhccccccc--cCcccccchhhhhhhhhhhh
Q 012538 179 TGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYG--HGKIKFGAQMGYCNYLLWAP 256 (461)
Q Consensus 179 t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G~lqi~~~~~~p~~~~--~~~l~~~qrl~y~~~~~~~~ 256 (461)
||++||++||||+||+|++++|.|+||+|+.+++.||+||++|++||+++++||+++| .++|++.||++|+++++||+
T Consensus 743 TG~rlH~rGWrSvY~~p~r~AF~GlAP~~L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~~~~L~l~QRL~Yl~~~ly~~ 822 (1040)
T PLN02189 743 TGFKMHCRGWRSIYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYGYKGGNLKWLERFAYVNTTIYPF 822 (1040)
T ss_pred HHHHHHccCCceEecCCCcHHhcCcCCCCHHHHHHHHHHHhhhhHHHhhccCCccccccCCCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999888999999999999999999999999999999999999976 36799999999999999999
Q ss_pred hHHHHHHHHHHhHHhHhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCccccccchhhhHHHHHHHHHHHHHHH
Q 012538 257 LSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVD 336 (461)
Q Consensus 257 ~~~~~~~~~~~P~l~l~~g~~~~~~~~~~~~l~f~~~~~~~~~~~~l~~~~~G~~~~~ww~~qr~w~i~~~~~~~~~~~~ 336 (461)
.++|+++|+++|++||++|++++|.++++++++|++++++++++.++|++|+|.++++|||+||||+|.+++++++++++
T Consensus 823 ~sip~liY~~lP~l~Ll~g~~i~p~vs~~~~~~fi~lf~~~~~~~llE~~~sG~s~~~WWrnQq~w~I~~~Sa~Lfavl~ 902 (1040)
T PLN02189 823 TSLPLLAYCTLPAICLLTGKFIMPPISTFASLFFIALFMSIFATGILELRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQ 902 (1040)
T ss_pred HHHHHHHHHHHHHHHHhcCCcccCccchHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHhhhhhHHHHhhhHHHHHHHHH
Confidence 99999999999999999999999998889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCccceEEecccccchhhhHHHhhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchhHHHHHHHH
Q 012538 337 CIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGFIDIIFLDFGALGNLMCQIIL 416 (461)
Q Consensus 337 ~llk~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~p~~ip~~~l~~l~l~al~~g~~~~~~~~~~~~~~~~~~l~~ 416 (461)
+++|+|++++.+|+||+|..+++. .++.|+|+ ++|+++|+++++++|++|+++|+.+++.+++..|+++++++++
T Consensus 903 ~ilKvlggs~~~F~VTsK~~~d~~----~~~ly~f~-~s~l~iP~ttl~i~Nlvaiv~g~~~~~~~~~~~~~~~~~~~~~ 977 (1040)
T PLN02189 903 GLLKVLAGIDTNFTVTSKATDDDE----FGELYAFK-WTTLLIPPTTLLIINIVGVVAGISDAINNGYQSWGPLFGKLFF 977 (1040)
T ss_pred HHHHHhccCcccceeccccccccc----cccceeec-ceeHhHHHHHHHHHHHHHHHHHHHHHHhcCccccchhHHHHHH
Confidence 999999999999999999876543 14678897 6999999999999999999999999987666689999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCeeehhhHHHHHHHhhcccc
Q 012538 417 CGLMVLVNVPIYEALFIRKDKGCMPFSVMFKSMFLASLACLLPY 460 (461)
Q Consensus 417 ~~~~v~~~~p~~~~l~~Rk~~~~~P~~~~~~s~~~~~~~~~~~~ 460 (461)
|+|+|+++|||++||++|+ +|+|++++++|++++++++++++
T Consensus 978 ~~wvv~~~~Pf~kgl~gR~--~r~P~~v~v~s~ll~~~~~l~~v 1019 (1040)
T PLN02189 978 AFWVIVHLYPFLKGLMGRQ--NRTPTIVVIWSVLLASIFSLLWV 1019 (1040)
T ss_pred HHHHHHHHHHHHHHHhccC--CCCCeeehHHHHHHHHHHHHHHh
Confidence 9999999999999999998 56999999999999999999876
No 4
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=100.00 E-value=3.9e-118 Score=975.19 Aligned_cols=454 Identities=35% Similarity=0.637 Sum_probs=420.6
Q ss_pred CCccCCCCCCCCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCc
Q 012538 1 MAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKN 80 (461)
Q Consensus 1 v~Rekrp~~~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~ 80 (461)
|||||||+++||+||||||+++|+|+++||+|||+|+||||++|||++++++||||+||+.++++||||+||+|+|++++
T Consensus 521 VSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYiNns~alr~AMCf~lDp~~g~~vafVQFPQrF~~i~k~ 600 (1079)
T PLN02638 521 VSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFLMDPNLGKSVCYVQFPQRFDGIDRN 600 (1079)
T ss_pred EecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCcccCchHHHHHhhhhhcCcccCCeeEEecCCcccCCCCCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHhhcCCccccccceeEechhhcCCCCCc-------c--------------------c--c---
Q 012538 81 DLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPK-------D--------------------Y--R--- 128 (461)
Q Consensus 81 d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~-------~--------------------~--~--- 128 (461)
|+|+|++++||+++++|+||++||+|+||||+|||+||+|..+.. + . .
T Consensus 601 D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALYG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (1079)
T PLN02638 601 DRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPIKPKHKKPGFLSSLCGGSRKKSSKSSKKGSDKKKSG 680 (1079)
T ss_pred CcccccceeeeccccccccccCCccccccCcceeehhhcCcCCcccccccccccccccccccccccccccchhhcccccc
Confidence 999999999999999999999999999999999999999872200 0 0 0
Q ss_pred ---c----------------------cc------------c--c------------cCCCCcChHHHHHHhchhcccccc
Q 012538 129 ---N----------------------IN------------E--A------------KNNDNRSVDELEKASKVLASCSYE 157 (461)
Q Consensus 129 ---~----------------------~~------------~--~------------~~~~~~~~~~~~~~a~~~~~c~ye 157 (461)
+ +. + + ..+.+.+.+++++||++|+||+||
T Consensus 681 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~~~~~~~~s~l~eA~~V~sC~YE 760 (1079)
T PLN02638 681 KHVDPTVPVFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPESLLKEAIHVISCGYE 760 (1079)
T ss_pred ccccccccccccccccccccccccchhhhhhhhhhhhhhhccccHHHHHHHHHhhcCCCCCCCcHHHHHHHHhhccCCCc
Confidence 0 00 0 0 002334567899999999999999
Q ss_pred cccccccccCCCCCCccchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHHHHHHhhhhhcchhHHHHHhhccccccc-
Q 012538 158 KNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYG- 236 (461)
Q Consensus 158 ~~t~wg~~~G~~~~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G~lqi~~~~~~p~~~~- 236 (461)
++|+||+++||.|+|+|||+.||++||++||||+||+|++++|.|+||+|+.+++.||+||++|++||+++++||+++|
T Consensus 761 ~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~P~r~AF~GlAP~~l~d~L~Qr~RWA~G~lqI~fsr~nPl~~G~ 840 (1079)
T PLN02638 761 DKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGY 840 (1079)
T ss_pred cCCchhhhcCeeecceecHHHHHHHHHcCCCcEEecCCCchHhcCcCCCCHHHHHHHHHHHhhcchheeeccCCcccccc
Confidence 9999999999999999999999999999999999998878899999999999999999999999999999999999977
Q ss_pred cCcccccchhhhhhhhhhhhhHHHHHHHHHHhHHhHhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCcccccc
Q 012538 237 HGKIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWW 316 (461)
Q Consensus 237 ~~~l~~~qrl~y~~~~~~~~~~~~~~~~~~~P~l~l~~g~~~~~~~~~~~~l~f~~~~~~~~~~~~l~~~~~G~~~~~ww 316 (461)
.++|++.||++|+++++||++++|+++|+++|++||++|++++|+++++++++|+++++++++++++|++|+|.++++||
T Consensus 841 ~~rL~l~QRL~Yl~~~~yp~~sip~liY~llP~l~Ll~G~~i~P~vs~~~~~~f~~lfl~~~~~~llE~~wsG~si~~WW 920 (1079)
T PLN02638 841 GGRLKWLERFAYVNTTIYPITSIPLLLYCTLPAVCLLTGKFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWW 920 (1079)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCccchHHHHHHHHHHHHHHHHHHHHHhccccHHHHh
Confidence 47899999999999999999999999999999999999999999888888889999999999999999999999999999
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHhcCCccceEEecccccchhhhHHHhhhhhhcccchhHHHHHHHHHHHHHHHHHHH
Q 012538 317 NLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGF 396 (461)
Q Consensus 317 ~~qr~w~i~~~~~~~~~~~~~llk~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~p~~ip~~~l~~l~l~al~~g~ 396 (461)
|+||||+|.++++++++++++++|+|++++.+|.||+|..+++.+ .++.|+|+ ++|+++|.++++++|++|+++|+
T Consensus 921 rnQr~w~I~~tSa~lfavl~~iLK~Lggs~~~F~VTsK~~d~~~~---~~ely~f~-wS~l~iP~ttl~iiNlvaiv~g~ 996 (1079)
T PLN02638 921 RNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGD---FAELYMFK-WTTLLIPPTTLLIINLVGVVAGI 996 (1079)
T ss_pred hhhhheehhhhHHHHHHHHHHHHHHHccCcccceecccccccccc---ccceeEec-ceehhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998765432 36788997 79999999999999999999999
Q ss_pred HHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeeehhhHHHHHHHhhcccc
Q 012538 397 IDIIFLDFGALGNLMCQIILCGLMVLVNVPIYEALFIRKDKGCMPFSVMFKSMFLASLACLLPY 460 (461)
Q Consensus 397 ~~~~~~~~~~~~~~~~~l~~~~~~v~~~~p~~~~l~~Rk~~~~~P~~~~~~s~~~~~~~~~~~~ 460 (461)
.+++.+++..|+.+++++++|+|+|+++|||++||++|| +|+|++++++|++++++++++++
T Consensus 997 ~~~~~~g~~~~~~~~~~~~~~~wvv~~l~Pf~kgl~gR~--~r~P~~v~v~s~ll~~~~~l~~v 1058 (1079)
T PLN02638 997 SYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQ--NRTPTIVVVWSILLASIFSLLWV 1058 (1079)
T ss_pred HHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHhccC--CCCCeeehHHHHHHHHHHHHHHh
Confidence 999876666899999999999999999999999999998 56999999999999999999886
No 5
>PLN02400 cellulose synthase
Probab=100.00 E-value=1.2e-117 Score=971.69 Aligned_cols=454 Identities=34% Similarity=0.607 Sum_probs=421.6
Q ss_pred CCccCCCCCCCCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCc
Q 012538 1 MAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKN 80 (461)
Q Consensus 1 v~Rekrp~~~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~ 80 (461)
|||||||+++||+||||||+++|+|+++||+|||+|+||||++|||++++++||||+||+.++++||||+||+|+|++++
T Consensus 528 VSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~ILNlDCDmY~Nns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gi~~~ 607 (1085)
T PLN02400 528 VSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPAIGKKTCYVQFPQRFDGIDLH 607 (1085)
T ss_pred EeccCCCCCCcchhhhhhHHHHHHhhhhcCCceEEecccccccCCchhHHhhhhheeccCCCceeEEEeCCcccCCCCCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHhhcCCccccccceeEechhhcCCCCC--ccc-------------------------------
Q 012538 81 DLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYP--KDY------------------------------- 127 (461)
Q Consensus 81 d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~--~~~------------------------------- 127 (461)
|+|+|++++||++.++|+||++||+|+||||+|||+||+|.++. ++.
T Consensus 608 D~Y~n~~~vffdi~~~GldGlqGP~YvGTGC~frR~aLYG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 687 (1085)
T PLN02400 608 DRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEPNIIVKSCCGSRKKGKGSKKYNIDKKRAM 687 (1085)
T ss_pred CCcccceeEEeeccccccccCCCccccccCcceeeeeeccCCCccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999986321 000
Q ss_pred cc----------------------cc------------c--------------ccCCCCcChHHHHHHhchhcccccccc
Q 012538 128 RN----------------------IN------------E--------------AKNNDNRSVDELEKASKVLASCSYEKN 159 (461)
Q Consensus 128 ~~----------------------~~------------~--------------~~~~~~~~~~~~~~~a~~~~~c~ye~~ 159 (461)
+. ++ + ...+.+.+.++++++|++|+||+||++
T Consensus 688 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~~~~~~~~~~~~~~~~ll~eA~~V~sC~YE~~ 767 (1085)
T PLN02400 688 KRTESNVPIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDK 767 (1085)
T ss_pred cccccccccccccccccccccccchhhhhhhhhhhhhhccccHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhhccCCccC
Confidence 00 00 0 001234467889999999999999999
Q ss_pred cccccccCCCCCCccchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHHHHHHhhhhhcchhHHHHHhhccccccc-cC
Q 012538 160 THWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYG-HG 238 (461)
Q Consensus 160 t~wg~~~G~~~~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G~lqi~~~~~~p~~~~-~~ 238 (461)
|+||+++||.|+|+|||+.||++||++||||+||+|++++|.|+||+|+.++++||+||++|++||+++++||+++| .+
T Consensus 768 T~WG~evGwiYGSvTED~~TG~~LH~rGWrSvY~~p~r~af~GlAP~~l~d~L~Qr~RWA~G~lqI~~sr~nPl~~G~~~ 847 (1085)
T PLN02400 768 TEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNG 847 (1085)
T ss_pred CchhhhhCeeccceechHHHHHHHHccCCceEecCCCcHhhcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCC
Confidence 99999999999999999999999999999999999888899999999999999999999999999999999999976 47
Q ss_pred cccccchhhhhhhhhhhhhHHHHHHHHHHhHHhHhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCccccccch
Q 012538 239 KIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNL 318 (461)
Q Consensus 239 ~l~~~qrl~y~~~~~~~~~~~~~~~~~~~P~l~l~~g~~~~~~~~~~~~l~f~~~~~~~~~~~~l~~~~~G~~~~~ww~~ 318 (461)
+|+++||++|+++++||+.++|+++|+++|++||++|++++|.++++++++|+++++++++++++|++|+|.++++|||+
T Consensus 848 ~L~l~QRL~Yl~~~~y~~~slp~liY~llP~l~LltG~~i~P~vs~~~~~~fi~lf~~~~~~~lLE~~~sG~si~~WWrn 927 (1085)
T PLN02400 848 RLKLLERLAYINTIVYPITSIPLLAYCVLPAFCLITNKFIIPEISNYASMWFILLFISIFATGILELRWSGVGIEDWWRN 927 (1085)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCccchHHHHHHHHHHHHHHHHHHHHHhhcCccHHHhhhc
Confidence 89999999999999999999999999999999999999999998888999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcCCccceEEecccccchhhhHHHhhhhhhcccchhHHHHHHHHHHHHHHHHHHHHH
Q 012538 319 QRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGFID 398 (461)
Q Consensus 319 qr~w~i~~~~~~~~~~~~~llk~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~p~~ip~~~l~~l~l~al~~g~~~ 398 (461)
||||+|.++++++++++++++|+|++++.+|.||+|..+++.. ..+.|+|+ ++++++|+++++++|++|+++|+.+
T Consensus 928 Qq~w~I~~~Sa~Lfavl~~ilKvLgg~~~~F~VTsK~~d~~~~---~~ely~f~-~s~L~iP~ttl~llNlvaiv~Gv~~ 1003 (1085)
T PLN02400 928 EQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGD---FAELYVFK-WTSLLIPPTTVLLVNLVGIVAGVSY 1003 (1085)
T ss_pred cceeeehhhHHHHHHHHHHHHHHhcCCcccceecCCccccccc---ccceeeec-ccchhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998765321 25788997 7899999999999999999999999
Q ss_pred HhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeeehhhHHHHHHHhhcccc
Q 012538 399 IIFLDFGALGNLMCQIILCGLMVLVNVPIYEALFIRKDKGCMPFSVMFKSMFLASLACLLPY 460 (461)
Q Consensus 399 ~~~~~~~~~~~~~~~l~~~~~~v~~~~p~~~~l~~Rk~~~~~P~~~~~~s~~~~~~~~~~~~ 460 (461)
++.++++.|+.+++++++|+|+|+++|||++||++|+ +|+|++++++|++++++++++++
T Consensus 1004 ~i~~g~~~~g~l~~~~~~~~wvvv~l~Pf~kgL~gR~--~r~P~~v~~~s~lla~~~~l~~v 1063 (1085)
T PLN02400 1004 AINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQ--NRTPTIVIVWSILLASIFSLLWV 1063 (1085)
T ss_pred HHhcccchhhHHHHHHHHHHHHHHHHHHHHHHHhccC--CCCceeHHHHHHHHHHHHHHHhe
Confidence 9886677899999999999999999999999999887 67999999999999999999886
No 6
>PLN02436 cellulose synthase A
Probab=100.00 E-value=4.1e-117 Score=963.83 Aligned_cols=453 Identities=34% Similarity=0.655 Sum_probs=418.0
Q ss_pred CCccCCCCCCCCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCc
Q 012538 1 MAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKN 80 (461)
Q Consensus 1 v~Rekrp~~~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~ 80 (461)
|||||||+++||+||||||+++|+|+++||+|||+++||||++|||++++++||||+||+.++++||||+||+|+|++++
T Consensus 537 VSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~ILNLDCDmYiNns~a~r~AMCfllD~~~g~~~afVQFPQrF~gi~k~ 616 (1094)
T PLN02436 537 VSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKALREAMCFMMDPQSGKKICYVQFPQRFDGIDRH 616 (1094)
T ss_pred EecccCCCCCcchhhhhhhhhhhhheeecCCceEEecccccccCchHHHHHhhhhhcCCccCCeeEEEcCCcccCCCCCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHhhcCCccccccceeEechhhcCCCCCcccc--------------------------------
Q 012538 81 DLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYR-------------------------------- 128 (461)
Q Consensus 81 d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~-------------------------------- 128 (461)
|+|+|++++||++.++|+||++||+|+||||+|||+||+|..+.++.+
T Consensus 617 D~Y~n~~~vffdi~~~GlDGlqGP~YvGTGC~frR~aLYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 696 (1094)
T PLN02436 617 DRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPKKKKPPGKTCNCWPKWCCLCCGSRKKKKKKKSKEKK 696 (1094)
T ss_pred CcccccceEeeeccccccccCCCccccccCceeeeeeeeccCCccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999999999999999999999874221000
Q ss_pred -----cc--------------------------------cc--c------------cCCCCcChHHHHHHhchhcccccc
Q 012538 129 -----NI--------------------------------NE--A------------KNNDNRSVDELEKASKVLASCSYE 157 (461)
Q Consensus 129 -----~~--------------------------------~~--~------------~~~~~~~~~~~~~~a~~~~~c~ye 157 (461)
+. ++ + ..+.+++.++++++|++|+||+||
T Consensus 697 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~~~~~~~~~~s~l~eA~~V~sC~YE 776 (1094)
T PLN02436 697 KKKNREASKQIHALENIEEGIEGSNNEKSSETPQLKLEKKFGQSPVFVASTLLENGGVPRNASPASLLREAIQVISCGYE 776 (1094)
T ss_pred cccccccccccccccccccccccccchhhhhhhhhhHHhhhcccHHHHHHHHHhhcCCCCCCCcHHHHHHHHHhhcCCCc
Confidence 00 00 0 002334667899999999999999
Q ss_pred cccccccccCCCCCCccchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHHHHHHhhhhhcchhHHHHHhhccccccc-
Q 012538 158 KNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYG- 236 (461)
Q Consensus 158 ~~t~wg~~~G~~~~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G~lqi~~~~~~p~~~~- 236 (461)
++|+||+++||.|+|+|||+.||++||++||||+||+|++++|.|+||+|+.+++.||+||++|++||+++++||+++|
T Consensus 777 ~~T~WG~evGwiYGSvTEDv~TG~rLH~rGWrSvY~~P~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIffsr~nPl~~g~ 856 (1094)
T PLN02436 777 DKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGY 856 (1094)
T ss_pred ccChhhHhhCeeccceecHHHHHHHHHcCCCceEeCCCCchhhcCcCCCCHHHHHHHHHHHhhcceeeeeccCCcchhcc
Confidence 9999999999999999999999999999999999998888899999999999999999999999999999999999976
Q ss_pred cCcccccchhhhhhhhhhhhhHHHHHHHHHHhHHhHhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCcccccc
Q 012538 237 HGKIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWW 316 (461)
Q Consensus 237 ~~~l~~~qrl~y~~~~~~~~~~~~~~~~~~~P~l~l~~g~~~~~~~~~~~~l~f~~~~~~~~~~~~l~~~~~G~~~~~ww 316 (461)
.++|+++||++|+++++||++++|+++|+++|++||++|++++|.++.+|+++|+++++++++++++|++|+|.++++||
T Consensus 857 ~~~L~l~QRL~Yl~~~ly~l~Slp~liY~~lP~l~LL~G~~i~P~vs~~~~~~fi~lfls~~~~~lLE~~wsG~si~~WW 936 (1094)
T PLN02436 857 GGGLKWLERFSYINSVVYPWTSIPLIVYCTLPAICLLTGKFIVPEISNYASILFMALFISIAATGILEMQWGGVGIDDWW 936 (1094)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCccchHHHHHHHHHHHHHHHHHHHHHHhccccHHHhh
Confidence 46899999999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHhcCCccceEEecccccchhhhHHHhhhhhhcccchhHHHHHHHHHHHHHHHHHHH
Q 012538 317 NLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGF 396 (461)
Q Consensus 317 ~~qr~w~i~~~~~~~~~~~~~llk~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~p~~ip~~~l~~l~l~al~~g~ 396 (461)
|+||||+|.++++++|+++++++|+|++++.+|.||+|..+++. ..+.|+|+ ++++++|+++++++|++|+++|+
T Consensus 937 rnQq~w~I~~tSa~Lfavl~~iLKvLggs~~~F~VTsK~~d~~~----~a~ly~f~-~S~L~iP~tti~ilNlvaiv~Gi 1011 (1094)
T PLN02436 937 RNEQFWVIGGVSSHLFALFQGLLKVLAGVNTNFTVTSKAADDGE----FSELYLFK-WTSLLIPPTTLLIINIIGVIVGV 1011 (1094)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhccCcccceeccccccccc----ccceeeec-ceeHhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999876431 12456787 68999999999999999999999
Q ss_pred HHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeeehhhHHHHHHHhhcccc
Q 012538 397 IDIIFLDFGALGNLMCQIILCGLMVLVNVPIYEALFIRKDKGCMPFSVMFKSMFLASLACLLPY 460 (461)
Q Consensus 397 ~~~~~~~~~~~~~~~~~l~~~~~~v~~~~p~~~~l~~Rk~~~~~P~~~~~~s~~~~~~~~~~~~ 460 (461)
.+++.++++.|+.+++++++|+|+|+++|||++||++| ++|+|++++++|+++++++|++++
T Consensus 1012 ~~~i~~g~~~~g~l~~~l~~~~wvvv~lyPf~kgL~gr--~~r~P~~v~v~s~lla~~~~l~~v 1073 (1094)
T PLN02436 1012 SDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGLLGK--QDRMPTIILVWSILLASILTLLWV 1073 (1094)
T ss_pred HHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCCCeeehHHHHHHHHHHHHHHe
Confidence 99988667789999999999999999999999999954 458999999999999999999986
No 7
>PLN02195 cellulose synthase A
Probab=100.00 E-value=2.5e-116 Score=954.22 Aligned_cols=453 Identities=35% Similarity=0.633 Sum_probs=417.9
Q ss_pred CCccCCCCCCCCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCc
Q 012538 1 MAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKN 80 (461)
Q Consensus 1 v~Rekrp~~~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~ 80 (461)
|||||||+++||+||||||+++|+|+++||+|||+++||||++|+|++++++||||+||+.++++||||+||+|+|++++
T Consensus 424 VSREKrPg~~Hh~KAGamNallrvSavmTNap~il~lDcDmy~n~s~~lr~AMCf~~D~~~g~~va~VQ~PQ~F~~i~~~ 503 (977)
T PLN02195 424 VSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFLMDPVVGRDVCYVQFPQRFDGIDRS 503 (977)
T ss_pred EeccCCCCCCcccccchhHHHHHHhhhccCCCeEEEecCccccCcHHHHHHHHhhccCcccCCeeEEEcCCcccCCCCCC
Confidence 79999999999999999999999999999999999999999999889999999999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHhhcCCccccccceeEechhhcCCCCCc--------------------ccc-----------c
Q 012538 81 DLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPK--------------------DYR-----------N 129 (461)
Q Consensus 81 d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~--------------------~~~-----------~ 129 (461)
|+|+|++++||+++++|+||+|||+|+||||+|||+||+|..+.. ... .
T Consensus 504 D~y~~~~~~ffd~~~~g~dglqGP~YvGTGC~fRR~ALyG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (977)
T PLN02195 504 DRYANRNVVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYGPPSLPRLPKSSSSSSSCCCPTKKKPEQDPSEIYRDAKR 583 (977)
T ss_pred CCCCcccceeeeeeeccccccCCccccccCceeeehhhhccCccccccccccccccccccccccccccccchhhcccccc
Confidence 999999999999999999999999999999999999999863100 000 0
Q ss_pred ----c---------------------------cc--c------------cCCCCcChHHHHHHhchhccccccccccccc
Q 012538 130 ----I---------------------------NE--A------------KNNDNRSVDELEKASKVLASCSYEKNTHWGK 164 (461)
Q Consensus 130 ----~---------------------------~~--~------------~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~ 164 (461)
. ++ + ..+.....+++++||++|+||+||++|+||+
T Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~T~WG~ 663 (977)
T PLN02195 584 EDLNAAIFNLREIDNYDEYERSMLISQMSFEKTFGLSSVFIESTLMENGGVPESANPSTLIKEAIHVISCGYEEKTEWGK 663 (977)
T ss_pred ccccccccccccccccchhhhhhhhhhhHHHHhhcccHHHHHHHHHHhcCCCCCCCcHHHHHHHHhhhcccCccccchhh
Confidence 0 00 0 0022335677999999999999999999999
Q ss_pred ccCCCCCCccchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHHHHHHhhhhhcchhHHHHHhhccccccc--cCcccc
Q 012538 165 EMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYG--HGKIKF 242 (461)
Q Consensus 165 ~~G~~~~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G~lqi~~~~~~p~~~~--~~~l~~ 242 (461)
++||.|+|+|||+.||++||++||||+||+|++++|.|++|+|+.+++.||+||++|++||+++++||+++| .++|++
T Consensus 664 evGw~YGSvTEDv~TG~rlH~rGWrSvY~~p~r~af~G~AP~~L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~~~~L~~ 743 (977)
T PLN02195 664 EIGWIYGSVTEDILTGFKMHCRGWRSIYCMPVRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKW 743 (977)
T ss_pred hcCeeccceecHHHHHHHHHccCCcEEecCCccHHhcccCCCCHHHHHHHHHHHHhchhhhhhccCCccccccCCCCCCH
Confidence 999999999999999999999999999999888899999999999999999999999999999999999975 378999
Q ss_pred cchhhhhhhhhhhhhHHHHHHHHHHhHHhHhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCccccccchhhhH
Q 012538 243 GAQMGYCNYLLWAPLSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRML 322 (461)
Q Consensus 243 ~qrl~y~~~~~~~~~~~~~~~~~~~P~l~l~~g~~~~~~~~~~~~l~f~~~~~~~~~~~~l~~~~~G~~~~~ww~~qr~w 322 (461)
+||++|+++++||++++|+++|+++|++||++|++++|+++++++++|+++++++++++++|++|+|.++++|||+||||
T Consensus 744 ~QRL~Yl~~~ly~~~slp~liY~~lP~l~Ll~G~~i~P~vs~~~~~~f~~lfl~~~~~~~lE~~~sG~si~~WWrnqq~w 823 (977)
T PLN02195 744 LQRLAYINTIVYPFTSLPLIAYCTLPAICLLTGKFIIPTLSNLASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQFW 823 (977)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeecccchHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHhhhhhhh
Confidence 99999999999999999999999999999999999999988889898999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCccceEEecccccchhhhHHHhhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 012538 323 IIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGFIDIIFL 402 (461)
Q Consensus 323 ~i~~~~~~~~~~~~~llk~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~p~~ip~~~l~~l~l~al~~g~~~~~~~ 402 (461)
+|.++++++++++++++|+|++++.+|.||+|..+++. ..+.|+|+ ++|+++|.++++++|++|+++|+.+++.+
T Consensus 824 ~I~~tSa~Lfavl~~llKvLggs~~~F~VTsK~~dd~~----~~~~Y~f~-~S~l~iP~ttl~ilNlvaiv~g~~~~i~~ 898 (977)
T PLN02195 824 VIGGVSAHLFAVFQGFLKMLAGLDTNFTVTAKAADDTE----FGELYMVK-WTTLLIPPTSLLIINLVGVVAGFSDALNK 898 (977)
T ss_pred hhhhhHHHHHHHHHHHHHHHcCCCccceeccccccccc----hhcceecc-ceehhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999876532 13456787 78999999999999999999999999886
Q ss_pred ccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeeehhhHHHHHHHhhcccc
Q 012538 403 DFGALGNLMCQIILCGLMVLVNVPIYEALFIRKDKGCMPFSVMFKSMFLASLACLLPY 460 (461)
Q Consensus 403 ~~~~~~~~~~~l~~~~~~v~~~~p~~~~l~~Rk~~~~~P~~~~~~s~~~~~~~~~~~~ 460 (461)
+++.|+.+++++++|+|+|+++|||++||++|+ +|+|++++++|++++++++++++
T Consensus 899 ~~~~~g~l~~~~~~~~wvv~~~~Pf~kgl~gR~--~r~P~~v~v~s~ll~~~~~l~~v 954 (977)
T PLN02195 899 GYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQ--NRTPTIVVLWSVLLASVFSLVWV 954 (977)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHHhccC--CCCCeeehHHHHHHHHHHHHHHe
Confidence 677899999999999999999999999999998 56999999999999999999876
No 8
>PLN02190 cellulose synthase-like protein
Probab=100.00 E-value=3.4e-116 Score=936.04 Aligned_cols=449 Identities=34% Similarity=0.609 Sum_probs=408.2
Q ss_pred CCccCCCCCCCCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCC-CcEEEEecCcccccCCC
Q 012538 1 MAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKRE-HEIAFVQHPQRFDNICK 79 (461)
Q Consensus 1 v~Rekrp~~~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~-~~va~VQ~pq~f~n~~~ 79 (461)
|||||||+++||+||||||+++|+|+++||+|||+|+||||++|||++++++||||+|++.+ +++||||+||+|+
T Consensus 257 vSREKrP~~~Hh~KAGAmNaLlRVSavmtNaP~iLnlDCDmY~Nns~~~r~AmCf~ld~~~~~~~~~fVQfPQ~F~---- 332 (756)
T PLN02190 257 ISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYANEADVVRQAMCIFLQKSKNSNHCAFVQFPQEFY---- 332 (756)
T ss_pred EeccCCCCCCcccccchhHHHHHHhhhhccCCeEEEecCccccCchhHHHHhhhhhcCCCCCCCeeEEEeCchhhc----
Confidence 79999999999999999999999999999999999999999999999999999999998644 5899999999998
Q ss_pred cccchhHHHHHHHHHHHHHhhcCCccccccceeEechhhcCCCCCc---cc----------cc-----ccc--c------
Q 012538 80 NDLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPK---DY----------RN-----INE--A------ 133 (461)
Q Consensus 80 ~d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~---~~----------~~-----~~~--~------ 133 (461)
|+|+|++++||++.++|+||++||+|+||||+|||+||+|..+.+ +. .. .++ +
T Consensus 333 -D~y~n~~~v~f~~~~~GldGlqGP~YvGTGCffrR~alyG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~fg~s~~f~~s 411 (756)
T PLN02190 333 -DSNTNELTVLQSYLGRGIAGIQGPIYIGSGCFHTRRVMYGLSSDDLEDDGSLSSVATREFLAEDSLAREFGNSKEMVKS 411 (756)
T ss_pred -cccCccceEEEEEeeccccccCCcccccCCcceEeeeecCCCcccccccccccccccccccchhhhhhhcCCcHHHHHH
Confidence 679999999999999999999999999999999999999973210 00 00 000 0
Q ss_pred -------cCCCCcChHHHHHHhchhcccccccccccccccCCCCCCccchHHHHHHHHhcCCeEEEeCCCCCceecccCC
Q 012538 134 -------KNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPV 206 (461)
Q Consensus 134 -------~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~G~~~~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~ 206 (461)
..+.+...++++++|++|+||+||++|+||+++||.|+|+|||+.||++||++||||+||+|++++|.|.+|+
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~eA~~V~sC~YE~~T~WG~evG~~ygSitED~~TGl~mh~rGWrSvY~~p~~~AFlG~aP~ 491 (756)
T PLN02190 412 VVDALQRKPNPQNSLTNSIEAAQEVGHCHYEYQTSWGNTIGWLYDSVAEDLNTSIGIHSRGWTSSYISPDPPAFLGSMPP 491 (756)
T ss_pred HHHHhccCCCCccchHHHHHHHHhhcccCCCCCCchhhccCcccceeechHHHHHHHHccCCceEecCCCchhhcCcCCC
Confidence 0111334568999999999999999999999999999999999999999999999999999988999999999
Q ss_pred CHHHHHHhhhhhcchhHHHHHhhccccccc-cCcccccchhhhhhhhhhhhhHHHHHHHHHHhHHhHhcCCccccccchh
Q 012538 207 TLDIALVQMKRWSEGMFQIFLSKYCPFIYG-HGKIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLGHGISLFPKVSSL 285 (461)
Q Consensus 207 ~l~~~~~Qr~RWa~G~lqi~~~~~~p~~~~-~~~l~~~qrl~y~~~~~~~~~~~~~~~~~~~P~l~l~~g~~~~~~~~~~ 285 (461)
++.+.++||+||++|++||+++++||++++ .++|++.||++|++..+ |++++|+++|+++|++||++|++++|+. +
T Consensus 492 ~l~~~L~Q~~RWa~G~lqI~fsr~nPl~~g~~~~L~l~QRLaYl~~~~-~~~sip~l~Y~~lP~l~Ll~g~~i~P~~--~ 568 (756)
T PLN02190 492 GGPEAMVQQRRWATGLIEVLFNKQSPLIGMFCRKIRFRQRLAYLYVFT-CLRSIPELIYCLLPAYCLLHNSALFPKG--V 568 (756)
T ss_pred ChHHHhhhhhhHhhhhHHHHHhcCCCceeccCCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCccccCc--c
Confidence 999999999999999999999999999975 57999999999999988 9999999999999999999999999974 6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHcCCccccccchhhhHHHHHHHHHHHHHHHHHHHHhcCCccceEEeccccc--------
Q 012538 286 WFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVT-------- 357 (461)
Q Consensus 286 ~~l~f~~~~~~~~~~~~l~~~~~G~~~~~ww~~qr~w~i~~~~~~~~~~~~~llk~l~~~~~~F~VT~K~~~-------- 357 (461)
|+++++++++++++++++|++|+|.++++|||+||||+|.++++++++++++++|+||+++.+|+||.|..+
T Consensus 569 ~~~~~~~l~~~~~~~~l~E~~~sG~s~~~WWnnqr~w~I~~~sa~l~a~~~~~lK~lg~s~~~F~vTsK~~~~~~~~~~~ 648 (756)
T PLN02190 569 YLGIIVTLVGMHCLYTLWEFMSLGFSVQSWYVSQSFWRIKATSSWLFSIQDIILKLLGISKTVFIVTKKTMPETKSGSGS 648 (756)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHhhhheEEeecchHHHHHHHHHHHHHhccccceEEEeecccccccccccc
Confidence 888888888999999999999999999999999999999999999999999999999999999999999754
Q ss_pred -----chhhhHHHhhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhc---ccCchhHHHHHHHHHHHHHHHHHHHHH
Q 012538 358 -----EDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGFIDIIFL---DFGALGNLMCQIILCGLMVLVNVPIYE 429 (461)
Q Consensus 358 -----~~~~~~~~~~~~~f~~~~p~~ip~~~l~~l~l~al~~g~~~~~~~---~~~~~~~~~~~l~~~~~~v~~~~p~~~ 429 (461)
++++++|++++|+|+ +||+++|.++++++|++|+++|+++++.+ ..+.++. ++++++|+|+|++++||+|
T Consensus 649 ~~~~~~~~~~~~~~~~f~f~-~S~lfiP~tti~~~Nl~a~~~g~~~~~~~~~s~~~~~~~-l~q~~~~~~vv~~~~P~~~ 726 (756)
T PLN02190 649 GPSQGEDDGPNSDSGKFEFD-GSLYFLPGTFIVLVNLAALAGFLVGLQRSSYSHGGGGSG-LAEACGCILVVMLFLPFLK 726 (756)
T ss_pred ccccccccchhhhcceeEec-ceehHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccc-HHHHHHHHHHHHHHHHHHH
Confidence 344678899999998 79999999999999999999999887642 1234555 4999999999999999999
Q ss_pred HHhhhccCCCCCeeehhhHHHHHHHhhcccc
Q 012538 430 ALFIRKDKGCMPFSVMFKSMFLASLACLLPY 460 (461)
Q Consensus 430 ~l~~Rk~~~~~P~~~~~~s~~~~~~~~~~~~ 460 (461)
||+ |||||+||.|++++|++|+++|+++++
T Consensus 727 gl~-~kdkg~iP~s~~~~s~~l~~~f~~~~~ 756 (756)
T PLN02190 727 GLF-EKGKYGIPLSTLSKAAFLAVLFVVFSV 756 (756)
T ss_pred HHh-cCCCCCCChhHHHHHHHHHHHHHhccC
Confidence 998 999999999999999999999999864
No 9
>PLN02248 cellulose synthase-like protein
Probab=100.00 E-value=3.1e-115 Score=951.49 Aligned_cols=453 Identities=30% Similarity=0.532 Sum_probs=414.3
Q ss_pred CCccCCCCCCCCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCc
Q 012538 1 MAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKN 80 (461)
Q Consensus 1 v~Rekrp~~~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~ 80 (461)
|||||||+++||+||||||+++|+|+++||||||+|+||||++|||++++++||||+||+ ++++||||+||+|+|++++
T Consensus 590 VSREKRPg~~Hh~KAGAMNALlRVSavmTNgPfILNLDCDmYiNns~alr~AMCf~lD~~-g~~vAfVQFPQrF~~I~k~ 668 (1135)
T PLN02248 590 VSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSLAIREGMCFMMDRG-GDRICYVQFPQRFEGIDPS 668 (1135)
T ss_pred EecccCCCCCcccccchhhhHHHhhhhccCCCeEEEeccCcccCCchhHHhcchheecCC-CCceEEEcCCcccCCCCCC
Confidence 799999999999999999999999999999999999999999999999999999999996 8999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHhhcCCccccccceeEechhhcCCCCCc---------------ccc---------------cc
Q 012538 81 DLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPK---------------DYR---------------NI 130 (461)
Q Consensus 81 d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~---------------~~~---------------~~ 130 (461)
|+|+|++++||+++++|+||+|||+||||||+|||+||+|..+.. +.+ ++
T Consensus 669 D~Ygn~~~Vffdi~~~GlDGlqGP~YvGTGCffRR~ALYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (1135)
T PLN02248 669 DRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFDPPRAKEHSGCFGSCKFTKKKKKETSASEPEEQPDLEDD 748 (1135)
T ss_pred CccCCcceeeeeeeeccccccCCccccccCceeeehhhcCcCCccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999999999999999999999862210 000 00
Q ss_pred ----------cc--------cc-----C---------------------CCCcChHHHHHHhchhccccccccccccccc
Q 012538 131 ----------NE--------AK-----N---------------------NDNRSVDELEKASKVLASCSYEKNTHWGKEM 166 (461)
Q Consensus 131 ----------~~--------~~-----~---------------------~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~ 166 (461)
++ +. + +......++++||++|+||+||++|+||+++
T Consensus 749 ~~~~~~~~~~rfG~S~~fi~S~~~a~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~T~WG~ev 828 (1135)
T PLN02248 749 DDLELSLLPKRFGNSTMFAASIPVAEFQGRPLADHPSVKNGRPPGALTVPREPLDAATVAEAISVISCWYEDKTEWGDRV 828 (1135)
T ss_pred chhhhhhhhhhhccchhhhhhhHHHhhcccccccccccccccccccccccccCCcHHHHHHHHhhcccccccCCchhhhc
Confidence 00 00 0 1112345789999999999999999999999
Q ss_pred CCCCCCccchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHHHHHHhhhhhcchhHHHHHhhccccccccCcccccchh
Q 012538 167 GLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYGHGKIKFGAQM 246 (461)
Q Consensus 167 G~~~~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G~lqi~~~~~~p~~~~~~~l~~~qrl 246 (461)
||.|+|+|||+.||++||++||||+||+|++++|.|++|+|+.++++||+||++|++||++++++|++++ ++|++.||+
T Consensus 829 G~~YGSvTEDv~TGlrLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIf~sr~~Pll~~-~~Lsl~QRL 907 (1135)
T PLN02248 829 GWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLAS-RRLKFLQRI 907 (1135)
T ss_pred CeeecceechHHHHHHHHhcCCceEeCCCChHhhcCCCCCCHHHHHHHHHHHhhchHHHHhccCCccccC-CCCCHHHHH
Confidence 9999999999999999999999999998888899999999999999999999999999999999998864 689999999
Q ss_pred hhhhhhhhhhhHHHHHHHHHHhHHhHhcCCccccccchhhHHHHH-HHHHHHHHHHHHHHHHcCCccccccchhhhHHHH
Q 012538 247 GYCNYLLWAPLSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFA-YVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIR 325 (461)
Q Consensus 247 ~y~~~~~~~~~~~~~~~~~~~P~l~l~~g~~~~~~~~~~~~l~f~-~~~~~~~~~~~l~~~~~G~~~~~ww~~qr~w~i~ 325 (461)
+|+++++||+.++++++|+++|++||++|++++|+. +++|++|+ .++++++.+.++|.+|+|.++++|||+||+|+|.
T Consensus 908 ~Yl~~~lypf~Slp~liY~llP~l~LLtGi~~~p~~-~~~fl~yll~l~l~~~~~sllE~~wsGvsl~~WWrnQq~W~I~ 986 (1135)
T PLN02248 908 AYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTL-NVTFLVYLLIITITLCLLAVLEIKWSGITLEEWWRNEQFWLIG 986 (1135)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccc-cHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHhhhhheeeeh
Confidence 999999999999999999999999999999999986 45666666 4457888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCccceEEecccccchhhhHHHhhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 012538 326 RTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGFIDIIFLDFG 405 (461)
Q Consensus 326 ~~~~~~~~~~~~llk~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~p~~ip~~~l~~l~l~al~~g~~~~~~~~~~ 405 (461)
++++++++++++++|+|++++.+|+||+|..+++.+++| ++.|+|+ ++|+++|+++++++|++|+++|++|++.+.++
T Consensus 987 ~tSA~L~A~l~aiLKvLggs~~~F~VTsK~~~~d~~~~~-a~ly~f~-wS~L~iP~ttl~llNLvAivvGv~R~i~g~~~ 1064 (1135)
T PLN02248 987 GTSAHLAAVLQGLLKVIAGIEISFTLTSKSAGDDEDDEF-ADLYIVK-WTSLMIPPITIMMVNLIAIAVGVSRTIYSEIP 1064 (1135)
T ss_pred hhHHHHHHHHHHHHHHhcCccccceeCCccccccccccc-chheecC-cchHHHHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence 999999999999999999999999999999877665667 6889997 68999999999999999999999999887667
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeeehhhHHHHHHHhhcccc
Q 012538 406 ALGNLMCQIILCGLMVLVNVPIYEALFIRKDKGCMPFSVMFKSMFLASLACLLPY 460 (461)
Q Consensus 406 ~~~~~~~~l~~~~~~v~~~~p~~~~l~~Rk~~~~~P~~~~~~s~~~~~~~~~~~~ 460 (461)
.|+.+++++++++|+++++|||++||++|| +|+|+++++||++++++++++++
T Consensus 1065 ~~~~l~g~l~~s~Wvv~~lyPf~kGL~gR~--gr~P~iv~v~s~ll~~~~sll~v 1117 (1135)
T PLN02248 1065 QWSKLLGGVFFSFWVLAHLYPFAKGLMGRR--GRTPTIVYVWSGLLSITISLLWV 1117 (1135)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHhccC--CCCCeehHHHHHHHHHHHHHHhe
Confidence 789999999999999999999999999994 56999999999999999999986
No 10
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=100.00 E-value=5.4e-115 Score=948.32 Aligned_cols=455 Identities=35% Similarity=0.650 Sum_probs=417.0
Q ss_pred CCccCCCCCCCCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCc
Q 012538 1 MAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKN 80 (461)
Q Consensus 1 v~Rekrp~~~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~ 80 (461)
|||||||+++||+||||||+++|+|+++||+|||+|+||||++|||++++++||||+||+.++++||||+||+|+|++++
T Consensus 459 VSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~iLNlDCDmY~Nns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gidk~ 538 (1044)
T PLN02915 459 VSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRH 538 (1044)
T ss_pred EecccCCCCCcchhhhhhhhHhhhhheeecCcEEEeeccccccCcchhhHhhceeeecCCCCCeeEEEeCCcccCCCCCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHhhcCCccccccceeEechhhcCCCCCc---------cc-----------------------c
Q 012538 81 DLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPK---------DY-----------------------R 128 (461)
Q Consensus 81 d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~---------~~-----------------------~ 128 (461)
|+|+|++++||++.++|+||++||+|+||||+|||+||+|..+.+ +. +
T Consensus 539 D~Y~n~~~Vffdi~~~GldGlqGP~YvGTGCffrR~aLYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (1044)
T PLN02915 539 DRYANRNVVFFDINMKGLDGIQGPVYVGTGCVFNRQALYGYDPPVSEKRPKMTCDCWPSWCCCCCGGGRRGKSKKSKKGK 618 (1044)
T ss_pred CCcCccceEEEeeecccccccCCcccccCCceeeeeeecCcCCccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999999999999999999999863210 00 0
Q ss_pred -------------------------------------------c------c--------------cc--c----------
Q 012538 129 -------------------------------------------N------I--------------NE--A---------- 133 (461)
Q Consensus 129 -------------------------------------------~------~--------------~~--~---------- 133 (461)
+ + ++ +
T Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~ 698 (1044)
T PLN02915 619 KGRRSLLGGLKKRKKKGGGGGSMMGKKYGRKKSQAVFDLEEIEEGLEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLME 698 (1044)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhcCCcHHHHHHHHHh
Confidence 0 0 00 0
Q ss_pred --cCCCCcChHHHHHHhchhcccccccccccccccCCCCCCccchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHHHH
Q 012538 134 --KNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIA 211 (461)
Q Consensus 134 --~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~G~~~~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~ 211 (461)
..+.+...++++++|++|+||+||++|+||+++||.|+|+|||+.||++||++||||+||+|++++|.|++|+|+.++
T Consensus 699 ~~~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~p~r~AF~GlAP~~L~d~ 778 (1044)
T PLN02915 699 DGGLPEGTNPAALIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDR 778 (1044)
T ss_pred hcCCCCCCCcHHHHHHHHhccccCCCccCchhHhhCccccccccHHHHHHHHHccCCcEEeeCCCcHHhcCcCCCCHHHH
Confidence 002233566899999999999999999999999999999999999999999999999999988889999999999999
Q ss_pred HHhhhhhcchhHHHHHhhccccccc-cCcccccchhhhhhhhhhhhhHHHHHHHHHHhHHhHhcCCccccccchhhHHHH
Q 012538 212 LVQMKRWSEGMFQIFLSKYCPFIYG-HGKIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPF 290 (461)
Q Consensus 212 ~~Qr~RWa~G~lqi~~~~~~p~~~~-~~~l~~~qrl~y~~~~~~~~~~~~~~~~~~~P~l~l~~g~~~~~~~~~~~~l~f 290 (461)
++||+||++|++||+++++||++++ .++|+++||++|+++++||+.++|+++|+++|++||++|++++|.++..+...|
T Consensus 779 L~Qr~RWA~G~lqIf~sr~~Pl~~g~~~~L~l~QRL~Yl~~~~yp~~slp~liY~llP~l~LLtG~~i~P~~s~~~~~~f 858 (1044)
T PLN02915 779 LHQVLRWALGSVEIFMSRHCPLWYAYGGKLKWLERLAYINTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLNNLASIWF 858 (1044)
T ss_pred HHHHHHHhhhHHHHHHhccCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCccchHHHHHH
Confidence 9999999999999999999999975 478999999999999999999999999999999999999999998766555666
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccccchhhhHHHHHHHHHHHHHHHHHHHHhcCCccceEEecccccchhhhHHHhhhhh
Q 012538 291 AYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMME 370 (461)
Q Consensus 291 ~~~~~~~~~~~~l~~~~~G~~~~~ww~~qr~w~i~~~~~~~~~~~~~llk~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~ 370 (461)
++++++++++.++|++|+|.++++|||+||+|+|.++++++++++++++|+|++++.+|+||+|..+++.++ ..+.|+
T Consensus 859 ~~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~iLKvLg~se~~F~VTsK~~d~~~d~--~~ely~ 936 (1044)
T PLN02915 859 LALFLSIIATSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKAADDEADE--FGELYL 936 (1044)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccCCcceecCCccccchhh--hcccee
Confidence 677889999999999999999999999999999999999999999999999999999999999987654432 247788
Q ss_pred hcccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeeehhhHHH
Q 012538 371 FGSSSVMFTIVATLAMLNLFSLIGGFIDIIFLDFGALGNLMCQIILCGLMVLVNVPIYEALFIRKDKGCMPFSVMFKSMF 450 (461)
Q Consensus 371 f~~~~p~~ip~~~l~~l~l~al~~g~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~p~~~~l~~Rk~~~~~P~~~~~~s~~ 450 (461)
|+ ++|+++|+++++++|++|+++|+++++.++++.++.+++++++++|+|++++||++||++|+ +|+|++++++|++
T Consensus 937 F~-~S~l~iP~ttllllNlvalv~Gi~~~i~~~~~~~g~l~~~l~~~~wvvv~lyPf~kgLmgR~--~r~P~~v~v~s~l 1013 (1044)
T PLN02915 937 FK-WTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQ--NRTPTIVVLWSIL 1013 (1044)
T ss_pred ec-ceehHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCC--CCCCeeehHHHHH
Confidence 87 79999999999999999999999999876677899999999999999999999999999998 5699999999999
Q ss_pred HHHHhhcccc
Q 012538 451 LASLACLLPY 460 (461)
Q Consensus 451 ~~~~~~~~~~ 460 (461)
++++++++++
T Consensus 1014 la~~~~ll~v 1023 (1044)
T PLN02915 1014 LASIFSLVWV 1023 (1044)
T ss_pred HHHHHHHHHh
Confidence 9999999986
No 11
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=100.00 E-value=2.4e-57 Score=500.66 Aligned_cols=354 Identities=20% Similarity=0.289 Sum_probs=295.6
Q ss_pred CCCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhh-cccCCCcEEEEecCcccccCCCcc-------
Q 012538 10 PHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLL-DEKREHEIAFVQHPQRFDNICKND------- 81 (461)
Q Consensus 10 ~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~-d~~~~~~va~VQ~pq~f~n~~~~d------- 81 (461)
|.|+||||+|+|+++ ++||||+++|||+++ +||+|++++++|. || ++|+||+||.|+|.++..
T Consensus 323 n~~gKAGnLN~aL~~----a~GEyIavlDAD~ip-~pdfL~~~V~~f~~dP----~VglVQtp~~f~n~dp~~rnl~~~~ 393 (852)
T PRK11498 323 HEHAKAGNINNALKY----AKGEFVAIFDCDHVP-TRSFLQMTMGWFLKDK----KLAMMQTPHHFFSPDPFERNLGRFR 393 (852)
T ss_pred CCcchHHHHHHHHHh----CCCCEEEEECCCCCC-ChHHHHHHHHHHHhCC----CeEEEEcceeccCCchHHHhhHHHh
Confidence 678999999999998 899999999999999 8999999999874 55 899999999999865421
Q ss_pred cchhHHHHHHHHHHHHHhhcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccccccc
Q 012538 82 LYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTH 161 (461)
Q Consensus 82 ~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~ 161 (461)
...++.+.||+.++.|++.++++++|||++++||++++++
T Consensus 394 ~~~~e~~~fy~~iq~g~~~~~a~~~~Gs~aviRReaLeeV---------------------------------------- 433 (852)
T PRK11498 394 KTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPLDEI---------------------------------------- 433 (852)
T ss_pred hcccchhHHHHHHHhHHHhhcccccccceeeeEHHHHHHh----------------------------------------
Confidence 1345677899999999999999999999999999999864
Q ss_pred cccccCCCCCCccchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHHHHHHhhhhhcchhHHHHHhhccccccccCccc
Q 012538 162 WGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYGHGKIK 241 (461)
Q Consensus 162 wg~~~G~~~~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G~lqi~~~~~~p~~~~~~~l~ 241 (461)
|||++++++||+++++++|++||+++|++++ ...|++|+|+.++++||.||++|++|+++.+ +|++ .++++
T Consensus 434 ----GGfd~~titED~dlslRL~~~Gyrv~yl~~~--~a~glaPesl~~~~~QR~RWarG~lQi~r~~-~pl~--~~gL~ 504 (852)
T PRK11498 434 ----GGIAVETVTEDAHTSLRLHRRGYTSAYMRIP--QAAGLATESLSAHIGQRIRWARGMVQIFRLD-NPLT--GKGLK 504 (852)
T ss_pred ----cCCCCCccCccHHHHHHHHHcCCEEEEEecc--ceeEECCCCHHHHHHHHHHHHHHHHHHHHHh-Chhc--cCCCC
Confidence 8999999999999999999999999999764 4579999999999999999999999999865 8987 57899
Q ss_pred ccchhhhhhhhhhhhhHHHHHHHHHHhHHhHhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCccccccchhhh
Q 012538 242 FGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRM 321 (461)
Q Consensus 242 ~~qrl~y~~~~~~~~~~~~~~~~~~~P~l~l~~g~~~~~~~~~~~~l~f~~~~~~~~~~~~l~~~~~G~~~~~ww~~qr~ 321 (461)
+.||++|++.++|++.++|.++|+++|++|+++|+.++.+. +..++++++..+....+.....+|..+..||++
T Consensus 505 ~~qRl~y~~~~l~~l~g~~~l~~l~~Pl~~l~~gi~~i~a~---~~~i~~y~lP~~~~~~l~~~~~~g~~r~~~wse--- 578 (852)
T PRK11498 505 LAQRLCYANAMLHFLSGIPRLIFLTAPLAFLLLHAYIIYAP---ALMIALFVLPHMIHASLTNSRIQGKYRHSFWSE--- 578 (852)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChheeCC---hHHHHHHHHHHHHHHHHHHHHhcCcchHhHHHH---
Confidence 99999999999999999999999999999999999888642 223333344433344455555667667788876
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccceEEecccccchhhhHHHhhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 012538 322 LIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGFIDIIF 401 (461)
Q Consensus 322 w~i~~~~~~~~~~~~~llk~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~p~~ip~~~l~~l~l~al~~g~~~~~~ 401 (461)
+++++.+++...+++..++++++.+|+||||++..+ ++.|+|+ ...|+++++++|++|+++|++++..
T Consensus 579 --iye~v~a~~l~~~~~~~ll~p~~~~F~VTpKg~~~~------~~~~~~~----~~~P~~~L~~L~l~gl~~g~~r~~~ 646 (852)
T PRK11498 579 --IYETVLAWYIAPPTTVALFNPHKGKFNVTAKGGLVE------EEYVDWV----ISRPYIFLVLLNLVGVAVGIWRYFY 646 (852)
T ss_pred --HHHHHHHHHHHHHHHHHHcCccCCCcccCCCCcccc------ccceehH----HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 555555556666677779999999999999987543 2356664 4567788999999999999999887
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 012538 402 LDFGALGNLMCQIILCGLMVLVNVPIYEALFIRKDKGC 439 (461)
Q Consensus 402 ~~~~~~~~~~~~l~~~~~~v~~~~p~~~~l~~Rk~~~~ 439 (461)
++..+.....++++|+.|+++++...+....+|++.++
T Consensus 647 ~~~~~~~~~~~~~~W~~~nl~~l~~a~~~~~e~~~~r~ 684 (852)
T PRK11498 647 GPPNEILTVIVSLVWVFYNLIILGGAVAVSVESKQVRR 684 (852)
T ss_pred CCcccchhhhhhHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 54444566789999999999999999999998887653
No 12
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=100.00 E-value=3.3e-56 Score=492.18 Aligned_cols=352 Identities=23% Similarity=0.328 Sum_probs=298.3
Q ss_pred CCCCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhh-cccCCCcEEEEecCcccccCCCc-------
Q 012538 9 CPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLL-DEKREHEIAFVQHPQRFDNICKN------- 80 (461)
Q Consensus 9 ~~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~-d~~~~~~va~VQ~pq~f~n~~~~------- 80 (461)
.|+|+||||||+|+++ ++||||+++|||+++ +||+|++++++|. || ++|+||+||.|+|.++.
T Consensus 211 ~n~~~KAgnLN~al~~----a~gd~Il~lDAD~v~-~pd~L~~~v~~f~~dp----~v~~Vqtp~~f~~p~~~~~nl~~~ 281 (713)
T TIGR03030 211 RNVHAKAGNINNALKH----TDGELILIFDADHVP-TRDFLQRTVGWFVEDP----KLFLVQTPHFFVSPDPIERNLGTF 281 (713)
T ss_pred CCCCCChHHHHHHHHh----cCCCEEEEECCCCCc-ChhHHHHHHHHHHhCC----CEEEEeCCeeccCCCHHhhhhHHH
Confidence 3678999999999998 899999999999999 7999999999995 44 89999999999986532
Q ss_pred ccchhHHHHHHHHHHHHHhhcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhccccccccc
Q 012538 81 DLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNT 160 (461)
Q Consensus 81 d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t 160 (461)
+...++.+.||+.++.|++.++++++||||+++||++++++
T Consensus 282 ~~~~~e~~~f~~~i~~g~~~~~~~~~~Gs~~~iRR~al~~i--------------------------------------- 322 (713)
T TIGR03030 282 RRMPNENELFYGLIQDGNDFWNAAFFCGSAAVLRREALDEI--------------------------------------- 322 (713)
T ss_pred HHhhhHHHHHHHHHHHHHhhhCCeeecCceeEEEHHHHHHc---------------------------------------
Confidence 23356677899999999999999999999999999999864
Q ss_pred ccccccCCCCCCccchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHHHHHHhhhhhcchhHHHHHhhccccccccCcc
Q 012538 161 HWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYGHGKI 240 (461)
Q Consensus 161 ~wg~~~G~~~~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G~lqi~~~~~~p~~~~~~~l 240 (461)
|||++++++||++++++||++||+++|+++. .+.|++|+|++++++||.||++|++|+++.+ +|++ .+++
T Consensus 323 -----GGf~~~~vtED~~l~~rL~~~G~~~~y~~~~--~~~g~~p~sl~~~~~Qr~RWa~G~~qi~~~~-~pl~--~~gl 392 (713)
T TIGR03030 323 -----GGIAGETVTEDAETALKLHRRGWNSAYLDRP--LIAGLAPETLSGHIGQRIRWAQGMMQIFRLD-NPLL--KRGL 392 (713)
T ss_pred -----CCCCCCCcCcHHHHHHHHHHcCCeEEEeccc--cccccCCCCHHHHHHHHHHHhcChHHHHhhh-Cccc--cCCC
Confidence 8999999999999999999999999999864 5679999999999999999999999999876 8987 5789
Q ss_pred cccchhhhhhhhhhhhhHHHHHHHHHHhHHhHhcCCccccccchhhHHHHHHHHHHHHHHHHHH-HHHcCCccccccchh
Q 012538 241 KFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFAYVFVAQNAYSICE-ALSCGHKLKSWWNLQ 319 (461)
Q Consensus 241 ~~~qrl~y~~~~~~~~~~~~~~~~~~~P~l~l~~g~~~~~~~~~~~~l~f~~~~~~~~~~~~l~-~~~~G~~~~~ww~~q 319 (461)
++.||++|++.++||+.+++.++|+++|++++++|++++++.. ..++ +++ +.+++.+++. ....|..+..||++
T Consensus 393 ~~~qrl~y~~~~~~~~~~~~~~~~~~~P~~~l~~~~~~~~~~~-~~~~--~~~-lp~~~~~~~~~~~~~~~~~~~~~~~- 467 (713)
T TIGR03030 393 SFPQRLCYLNAMLFWFFPLPRVIFLTAPLAYLFFGLNIFVASA-LEIL--AYA-LPHMLHSLLTNSYLFGRVRWPFWSE- 467 (713)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceeCCH-HHHH--HHH-HHHHHHHHHHHHHHcCCeecchHHH-
Confidence 9999999999999999999999999999999999999998632 1122 222 2333334443 34567677889987
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCCccceEEecccccchhhhHHHhhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHH
Q 012538 320 RMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGFIDI 399 (461)
Q Consensus 320 r~w~i~~~~~~~~~~~~~llk~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~p~~ip~~~l~~l~l~al~~g~~~~ 399 (461)
++++...++.+.+++.+++++++.+|+||||++..++. ..++++.|+++++++|++|+++|++++
T Consensus 468 ----~~~~~~~~~~~~~~~~~~~~~~~~~F~VT~Kg~~~~~~-----------~~~~~~~p~~~l~~l~~~~~~~~~~~~ 532 (713)
T TIGR03030 468 ----VYETVLAVYLLPPVLVTLLNPKKPKFNVTPKGELLDED-----------YFSPLSRPYLILFALILAGLAFGLYRI 532 (713)
T ss_pred ----HHHHHHHHHHHHHHHHHHhCcCCCCceecCCCcccccc-----------ccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66677677888888889999999999999998764321 124789999999999999999999998
Q ss_pred hhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 012538 400 IFLDFGALGNLMCQIILCGLMVLVNVPIYEALFIRKDKGC 439 (461)
Q Consensus 400 ~~~~~~~~~~~~~~l~~~~~~v~~~~p~~~~l~~Rk~~~~ 439 (461)
..+ ..+...+.++++|+.|+++++...+.+..+|+++++
T Consensus 533 ~~~-~~~~~~~~~~~~w~~~n~~~~~~~~~~~~~r~QrR~ 571 (713)
T TIGR03030 533 YGY-PIERGVLLVVLGWNLLNLILLGAALAVVAERRQRRS 571 (713)
T ss_pred hcC-ccccchhhHHHHHHHHHHHHHHHHHHHHccCCCCCC
Confidence 642 334456789999999999999999999999988875
No 13
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=99.97 E-value=1.6e-28 Score=268.56 Aligned_cols=213 Identities=16% Similarity=0.180 Sum_probs=163.3
Q ss_pred CCCCCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhh-cccCCCcEEEEecCcccccCCCcccchhH
Q 012538 8 GCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLL-DEKREHEIAFVQHPQRFDNICKNDLYANS 86 (461)
Q Consensus 8 ~~~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~-d~~~~~~va~VQ~pq~f~n~~~~d~~~~~ 86 (461)
.+|.|.||||+|.+++.++ .++|||+++|||+++ ++|++++++++|. || ++|.||+|+...|.+ ..+..-
T Consensus 200 ~~n~~~KaGNl~~~~~~~~--~~~eyivvLDADs~m-~~d~L~~lv~~m~~dP----~vGlVQt~~~~~n~~--slfaR~ 270 (691)
T PRK05454 200 RRNVGRKAGNIADFCRRWG--GAYDYMVVLDADSLM-SGDTLVRLVRLMEANP----RAGLIQTLPVAVGAD--TLFARL 270 (691)
T ss_pred CcCCCccHHHHHHHHHhcC--CCcCEEEEEcCCCCC-CHHHHHHHHHHHhhCc----CEEEEeCCccCcCCC--CHHHHH
Confidence 4577899999999999865 678999999999999 7999999999996 55 899999999988764 234332
Q ss_pred H----HHHHHHHHHHHhhcCC--ccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhccccccccc
Q 012538 87 Y----LVVNQVELAGIGSYDA--ALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNT 160 (461)
Q Consensus 87 ~----~~f~~~~~~g~~~~~~--~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t 160 (461)
+ +++......|.+.|++ ..|+|+|+++||+++.+. |..+.-.
T Consensus 271 qqf~~~~y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~~--------------------------------~glp~L~ 318 (691)
T PRK05454 271 QQFATRVYGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAEH--------------------------------CGLPPLP 318 (691)
T ss_pred HHHHHHHHHHHHHhhhhhhccCccccccceEEEEHHHHHHh--------------------------------cCCcccc
Confidence 2 2233455677777653 568999999999999642 1111000
Q ss_pred ccccccCCCCCCccchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHHHHHHhhhhhcchhHHHHHhhccccccccCcc
Q 012538 161 HWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYGHGKI 240 (461)
Q Consensus 161 ~wg~~~G~~~~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G~lqi~~~~~~p~~~~~~~l 240 (461)
..+||..++++||++++.+|+++|||++|+++. ..+++++|+|+.++++||.||++|++|++.. +. .+++
T Consensus 319 ---g~~p~~~~~LseD~~~a~~l~~~GyrV~~~pd~-~~~~ee~P~tl~~~~~qr~RW~~G~lQ~l~~----l~--~~gl 388 (691)
T PRK05454 319 ---GRGPFGGHILSHDFVEAALMRRAGWGVWLAPDL-PGSYEELPPNLLDELKRDRRWCQGNLQHLRL----LL--AKGL 388 (691)
T ss_pred ---ccCCCCCCcccHHHHHHHHHHHCCCEEEEcCcc-ccccccCCCCHHHHHHHHHHHHhchHHHHHH----HH--hcCC
Confidence 137898899999999999999999999999763 3468999999999999999999999998753 22 4689
Q ss_pred cccchhhhhhhhhhhhhHHHHH-HHHHHhHHh
Q 012538 241 KFGAQMGYCNYLLWAPLSLPTL-FYVIVPPLC 271 (461)
Q Consensus 241 ~~~qrl~y~~~~~~~~~~~~~~-~~~~~P~l~ 271 (461)
++.+|++|++..+.++.+...+ +.++.|++.
T Consensus 389 ~~~~R~~~l~g~~~yl~~P~wll~l~l~~~~~ 420 (691)
T PRK05454 389 HPVSRLHFLTGIMSYLSAPLWLLFLLLGTALA 420 (691)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999887666655543333 344444433
No 14
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=99.96 E-value=5.1e-29 Score=243.90 Aligned_cols=170 Identities=19% Similarity=0.233 Sum_probs=136.6
Q ss_pred CCCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhh-cccCCCcEEEEecCcccccCCCcccchh---
Q 012538 10 PHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLL-DEKREHEIAFVQHPQRFDNICKNDLYAN--- 85 (461)
Q Consensus 10 ~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~-d~~~~~~va~VQ~pq~f~n~~~~d~~~~--- 85 (461)
+.|+||||||++++..+ +++|||+++|||+++ +||+|++++.+|. || ++|+||+|+.+.|.+. .+..
T Consensus 77 ~~g~Kag~l~~~~~~~~--~~~~~i~~~DaD~~~-~p~~l~~~v~~~~~~~----~vg~vq~~~~~~n~~~--~~~~~~~ 147 (254)
T cd04191 77 NTGRKAGNIADFCRRWG--SRYDYMVVLDADSLM-SGDTIVRLVRRMEANP----RAGIIQTAPKLIGAET--LFARLQQ 147 (254)
T ss_pred CCCccHHHHHHHHHHhC--CCCCEEEEEeCCCCC-CHHHHHHHHHHHHhCC----CEEEEeCCceeECCCC--HHHHHHH
Confidence 66899999999998633 678999999999999 8999999999996 65 8999999999998652 2222
Q ss_pred -HHHHHHHHHHHHHhhcCC--ccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhccccccccccc
Q 012538 86 -SYLVVNQVELAGIGSYDA--ALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHW 162 (461)
Q Consensus 86 -~~~~f~~~~~~g~~~~~~--~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~w 162 (461)
+...|...++.|++.|++ .+++|++.++||++|++. |..+ .-
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~~--------------------------------~~~~---~i 192 (254)
T cd04191 148 FANRLYGPVFGRGLAAWQGGEGNYWGHNAIIRVAAFMEH--------------------------------CALP---VL 192 (254)
T ss_pred HHHHHHHHHHHHHHHHhcCCccCccceEEEEEHHHHHHh--------------------------------cCCc---cc
Confidence 234455567788877643 578999999999999642 1110 01
Q ss_pred ccccCCCCCCccchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHHHHHHhhhhhcchhHH
Q 012538 163 GKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQ 224 (461)
Q Consensus 163 g~~~G~~~~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G~lq 224 (461)
|..+||..++++||+++|++++.+|||++|.+.. ...++++|+|++++++||.||++|++|
T Consensus 193 ~g~g~~~~~~l~eD~~l~~~~~~~G~ri~~~~~~-~~~~~~~p~~~~~~~~qr~RW~~G~~q 253 (254)
T cd04191 193 PGRPPFGGHILSHDFVEAALMRRAGWEVRLAPDL-EGSYEECPPTLIDFLKRDRRWCQGNLQ 253 (254)
T ss_pred cCCCCCCCCeecHHHHHHHHHHHcCCEEEEccCC-cceEeECCCCHHHHHHHHHHHHhhcCc
Confidence 1136788899999999999999999999999753 234789999999999999999999987
No 15
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=99.95 E-value=1e-25 Score=237.51 Aligned_cols=164 Identities=18% Similarity=0.192 Sum_probs=135.8
Q ss_pred CCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchh----H
Q 012538 11 HNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYAN----S 86 (461)
Q Consensus 11 ~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~----~ 86 (461)
+++||+|+|.|++. +++|+++++|||+++ +||++++++..|.+ +++++.||+.....|.+ ...+. +
T Consensus 140 n~Gka~AlN~gl~~----a~~d~iv~lDAD~~~-~~d~L~~lv~~~~~---~~~~g~v~g~~~~~~~~--~~~~~~~~~e 209 (444)
T PRK14583 140 NQGKAIALRMGAAA----ARSEYLVCIDGDALL-DKNAVPYLVAPLIA---NPRTGAVTGNPRIRTRS--TLIGRVQVGE 209 (444)
T ss_pred CCCHHHHHHHHHHh----CCCCEEEEECCCCCc-CHHHHHHHHHHHHh---CCCeEEEEccceecCCC--cchhhHHHHH
Confidence 45799999999997 889999999999999 89999999988863 34899999987765532 22221 3
Q ss_pred HHHHHHHHHHHHhhcCCcc-ccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccccccccccc
Q 012538 87 YLVVNQVELAGIGSYDAAL-YCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKE 165 (461)
Q Consensus 87 ~~~f~~~~~~g~~~~~~~~-~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~ 165 (461)
...+++.+.++.+..+..+ .+|+++++||+++.++
T Consensus 210 ~~~~~~~~~~~~~~~g~~~~~sG~~~~~rr~al~~v-------------------------------------------- 245 (444)
T PRK14583 210 FSSIIGLIKRTQRVYGQVFTVSGVVAAFRRRALADV-------------------------------------------- 245 (444)
T ss_pred HHHHHHHHHHHHHHhCCceEecCceeEEEHHHHHHc--------------------------------------------
Confidence 3344555666666666654 4799999999999764
Q ss_pred cCCCCCCccchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHHHHHHhhhhhcchhHHHHHhhc
Q 012538 166 MGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKY 230 (461)
Q Consensus 166 ~G~~~~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G~lqi~~~~~ 230 (461)
|||+.++++||+++++|++.+||++.|+++ +.+++++|+|++++++||.||++|.+|+++++.
T Consensus 246 Gg~~~~~i~ED~dl~~rl~~~G~~i~~~p~--a~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~ 308 (444)
T PRK14583 246 GYWSPDMITEDIDISWKLQLKHWSVFFEPR--GLCWILMPETLRGLWKQRLRWAQGGAEVFLKNM 308 (444)
T ss_pred CCCCCCcccccHHHHHHHHHcCCeEEEeec--cEEeeeCCCCHHHHHHHHHHHhCcHHHHHHHHH
Confidence 899999999999999999999999999975 467899999999999999999999999998754
No 16
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.94 E-value=1.1e-26 Score=242.79 Aligned_cols=167 Identities=25% Similarity=0.298 Sum_probs=134.4
Q ss_pred CCCCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchhHHH
Q 012538 9 CPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYL 88 (461)
Q Consensus 9 ~~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~ 88 (461)
.++++|++|+|.+++. +++|+|+++|||++| +||+|+++++.|.|+. ..|.+|.|+.+.+.+....+...+.
T Consensus 120 ~~~~gK~~al~~~l~~----~~~d~V~~~DaD~~~-~~d~l~~~~~~f~~~~---~~~v~~~~~~~~~~~~~~~l~~~~~ 191 (439)
T COG1215 120 KKNGGKAGALNNGLKR----AKGDVVVILDADTVP-EPDALRELVSPFEDPP---VGAVVGTPRIRNRPDPSNLLGRIQA 191 (439)
T ss_pred ccCccchHHHHHHHhh----cCCCEEEEEcCCCCC-ChhHHHHHHhhhcCCC---eeEEeCCceeeecCChhhhcchhcc
Confidence 4678999999999997 779999999999999 8999999999998763 4478999987776532112222222
Q ss_pred HHHH----HHHH-HHhhcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccccccccc
Q 012538 89 VVNQ----VELA-GIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWG 163 (461)
Q Consensus 89 ~f~~----~~~~-g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg 163 (461)
..+. ...+ +.+.....+++|++.++||++|.+.
T Consensus 192 ~~~~~~~~~~~~~~~~~g~~~~~~G~~~~~rr~aL~~~------------------------------------------ 229 (439)
T COG1215 192 IEYLSAFYFRLRAASKGGLISFLSGSSSAFRRSALEEV------------------------------------------ 229 (439)
T ss_pred hhhhhhHHHhhhhhhhcCCeEEEcceeeeEEHHHHHHh------------------------------------------
Confidence 2221 1222 2222235678999999999999763
Q ss_pred cccCCCCCCccchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHHHHHHhhhhhcchhHHHHHhh
Q 012538 164 KEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSK 229 (461)
Q Consensus 164 ~~~G~~~~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G~lqi~~~~ 229 (461)
|||..+++|||.++++++|.+|||+.|+++ +.+++++|+|+.++++||.||++|.+|++..+
T Consensus 230 --g~~~~~~i~ED~~lt~~l~~~G~~~~~~~~--~~~~~~~p~t~~~~~~Qr~RW~~g~~~~~~~~ 291 (439)
T COG1215 230 --GGWLEDTITEDADLTLRLHLRGYRVVYVPE--AIVWTEAPETLKELWRQRLRWARGGLQVLLLH 291 (439)
T ss_pred --CCCCCCceeccHHHHHHHHHCCCeEEEeec--ceEeeeCcccHHHHHHHHHHHHcccceeeehh
Confidence 789999999999999999999999999986 36789999999999999999999999998753
No 17
>PRK11204 N-glycosyltransferase; Provisional
Probab=99.93 E-value=2.5e-24 Score=224.92 Aligned_cols=164 Identities=20% Similarity=0.242 Sum_probs=131.5
Q ss_pred CCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchh----H
Q 012538 11 HNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYAN----S 86 (461)
Q Consensus 11 ~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~----~ 86 (461)
+.+|++|+|.|++. +++|+++++|||+++ +||+|++++..|. .+++++.||+.....|.. ...+. +
T Consensus 119 n~Gka~aln~g~~~----a~~d~i~~lDaD~~~-~~d~L~~l~~~~~---~~~~v~~v~g~~~~~~~~--~~~~~~~~~~ 188 (420)
T PRK11204 119 NQGKANALNTGAAA----ARSEYLVCIDGDALL-DPDAAAYMVEHFL---HNPRVGAVTGNPRIRNRS--TLLGRIQVGE 188 (420)
T ss_pred CCCHHHHHHHHHHH----cCCCEEEEECCCCCC-ChhHHHHHHHHHH---hCCCeEEEECCceeccch--hHHHHHHHHH
Confidence 45799999999997 889999999999999 8999999999995 234899999887766532 12222 1
Q ss_pred HHHHHHHHHHHHhhcCCcc-ccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccccccccccc
Q 012538 87 YLVVNQVELAGIGSYDAAL-YCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKE 165 (461)
Q Consensus 87 ~~~f~~~~~~g~~~~~~~~-~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~ 165 (461)
....++....+....+... .+|+++++||+++.++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~v-------------------------------------------- 224 (420)
T PRK11204 189 FSSIIGLIKRAQRVYGRVFTVSGVITAFRKSALHEV-------------------------------------------- 224 (420)
T ss_pred HHHhhhHHHHHHHHhCCceEecceeeeeeHHHHHHh--------------------------------------------
Confidence 1222233334444444443 4799999999999753
Q ss_pred cCCCCCCccchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHHHHHHhhhhhcchhHHHHHhhc
Q 012538 166 MGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKY 230 (461)
Q Consensus 166 ~G~~~~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G~lqi~~~~~ 230 (461)
|||+++.++||+++++|++.+||++.|+++ +.++++.|+|++++++||.||++|.+|.++++.
T Consensus 225 gg~~~~~~~ED~~l~~rl~~~G~~i~~~p~--~~~~~~~p~t~~~~~~Qr~RW~~G~~~~l~~~~ 287 (420)
T PRK11204 225 GYWSTDMITEDIDISWKLQLRGWDIRYEPR--ALCWILMPETLKGLWKQRLRWAQGGAEVLLKNF 287 (420)
T ss_pred CCCCCCcccchHHHHHHHHHcCCeEEeccc--cEEEeECcccHHHHHHHHHHHhcCHHHHHHHHH
Confidence 899999999999999999999999999976 467899999999999999999999999998753
No 18
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=99.93 E-value=3.3e-24 Score=225.76 Aligned_cols=212 Identities=17% Similarity=0.114 Sum_probs=151.1
Q ss_pred CCCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhh-cccCCCcEEEEecCcccccC--CCc-c---c
Q 012538 10 PHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLL-DEKREHEIAFVQHPQRFDNI--CKN-D---L 82 (461)
Q Consensus 10 ~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~-d~~~~~~va~VQ~pq~f~n~--~~~-d---~ 82 (461)
+.++||+|+|+|++. +++|||+++|||+++ +||++++++..|. || +++.|+..+.-... ... . .
T Consensus 115 ~~~Gka~AlN~gl~~----s~g~~v~~~DaD~~~-~~d~L~~l~~~f~~~~----~v~~v~g~~~~~~~~~~~~~~~~~~ 185 (439)
T TIGR03111 115 SDQGKAKALNAAIYN----SIGKYIIHIDSDGKL-HKDAIKNMVTRFENNP----DIHAMTGVILTDKELIEKTKGRFLK 185 (439)
T ss_pred CCCCHHHHHHHHHHH----ccCCEEEEECCCCCc-ChHHHHHHHHHHHhCC----CeEEEEeEEecCchhhhhhcchhhh
Confidence 347899999999997 889999999999999 8999999999996 44 67766554321110 000 0 0
Q ss_pred chhHHHHHHHHH---H--HHHh-hcCCcc-ccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccc
Q 012538 83 YANSYLVVNQVE---L--AGIG-SYDAAL-YCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCS 155 (461)
Q Consensus 83 ~~~~~~~f~~~~---~--~g~~-~~~~~~-~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ 155 (461)
+..+.. +++.. . +... ..+..+ ++|+++++||+++.+.
T Consensus 186 ~~~~~~-~~~y~~~~l~~r~~~s~~~~~~~~sGa~~~~Rr~~l~~v---------------------------------- 230 (439)
T TIGR03111 186 LIRRCE-YFEYAQAFLAGRNFESQVNSLFTLSGAFSAFRRETILKT---------------------------------- 230 (439)
T ss_pred HhHHhH-HHHHHHHHHhhhHHHHhcCCeEEEccHHHhhhHHHHHHh----------------------------------
Confidence 111111 11111 1 1111 223333 4788889999999753
Q ss_pred cccccccccccCCCCCCccchHHHHHHHHh-cCCeEEEeCCCCCceecccCCCHHHHHHhhhhhcchhHHHHHhhccccc
Q 012538 156 YEKNTHWGKEMGLVYGCAAEDVVTGLTIQC-RGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFI 234 (461)
Q Consensus 156 ye~~t~wg~~~G~~~~~vtED~~t~~~l~~-~Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G~lqi~~~~~~p~~ 234 (461)
|||+.++++||++++++++. .|+++.|+++ +.++.++|+|++++++||.||++|.+|++....++..
T Consensus 231 ----------ggf~~~~i~ED~~l~~rl~~~~g~kv~~~~~--a~~~~~~p~t~~~~~~QR~RW~rG~~qv~~~~~~~~~ 298 (439)
T TIGR03111 231 ----------QLYNSETVGEDTDMTFQIRELLDGKVYLCEN--AIFYVDPIDGLNKLYTQRQRWQRGELEVSHMFFESAN 298 (439)
T ss_pred ----------CCCCCCCcCccHHHHHHHHHhcCCeEEECCC--CEEEEECCcCHHHHHHHHHHHhccHHHHHHHHHhhhh
Confidence 89999999999999999975 5899998875 4778999999999999999999999999976544433
Q ss_pred cccCcccccchhhhhhhhhhhhhHHHHHHHHHHhHHhHhcCCccc
Q 012538 235 YGHGKIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLGHGISLF 279 (461)
Q Consensus 235 ~~~~~l~~~qrl~y~~~~~~~~~~~~~~~~~~~P~l~l~~g~~~~ 279 (461)
.++.++.++..+..........+|.+++.++++++.+.|.++.
T Consensus 299 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (439)
T TIGR03111 299 --KSIKGFFSNFMVRRIMYDHTFAFPRMIWYFAMIFLIFLGYPVK 341 (439)
T ss_pred --hchhhhhhHHHHHHHHhhHhhHHHHHHHHHHHHHHHHhccHHH
Confidence 2345666666554444445557788888888888888776544
No 19
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=99.91 E-value=8.3e-23 Score=216.72 Aligned_cols=195 Identities=18% Similarity=0.184 Sum_probs=135.8
Q ss_pred CCChHHHHHHHHHhccc--cCC---CCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCccc---
Q 012538 11 HNFKAGAMNALIRVSSV--ISN---GPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDL--- 82 (461)
Q Consensus 11 ~~~KAGaLN~~l~~~~~--~s~---~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~--- 82 (461)
..+|++|||++++.+.. ... +|+|+++|||+++ +|++|+.....+. +.++||.|....+.+.+..
T Consensus 134 p~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v-~Pd~Lr~~~~~~~------~~~~VQ~pv~~~~~~~~~~~ag 206 (504)
T PRK14716 134 PTSKADCLNWIYQAIFAFERERGIRFAIIVLHDAEDVI-HPLELRLYNYLLP------RHDFVQLPVFSLPRDWGEWVAG 206 (504)
T ss_pred CCCHHHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCc-CccHHHHHHhhcC------CCCEEecceeccCCchhHHHHH
Confidence 35799999999986410 123 4999999999999 8999997655543 3467999986655332221
Q ss_pred -chhHHHHHHHHHHHHHhhcCCcc-ccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhccccccccc
Q 012538 83 -YANSYLVVNQVELAGIGSYDAAL-YCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNT 160 (461)
Q Consensus 83 -~~~~~~~f~~~~~~g~~~~~~~~-~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t 160 (461)
|..+....+...+..++.+++++ ++|+|+++||++|+.+ .++.
T Consensus 207 ~y~~ef~~~~~~~l~~r~~LG~~~~~~Gtg~afRR~aLe~l-----------------------~~~~------------ 251 (504)
T PRK14716 207 TYMDEFAESHLKDLPVREALGGLIPSAGVGTAFSRRALERL-----------------------AAER------------ 251 (504)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccccCCeeEEeEHHHHHHH-----------------------Hhhc------------
Confidence 11122222233455678888765 6899999999999632 1110
Q ss_pred cccccc-CCCCCCccchHHHHHHHHhcCCeEEEeCCCC-------------CceecccCCCHHHHHHhhhhhcchh-HHH
Q 012538 161 HWGKEM-GLVYGCAAEDVVTGLTIQCRGWKSMYFKPNK-------------PAFLGVAPVTLDIALVQMKRWSEGM-FQI 225 (461)
Q Consensus 161 ~wg~~~-G~~~~~vtED~~t~~~l~~~Gwrs~y~~~~~-------------~~~~g~~P~~l~~~~~Qr~RWa~G~-lqi 225 (461)
.| +|+.+++|||+++|+|++.+|||++|++... -+.++++|+|++++++||.||+.|. +|.
T Consensus 252 ----GG~~fd~~sLTED~dLglRL~~~G~rv~y~p~ai~~~~~~~~~~~~~v~t~e~~P~t~~a~~rQR~RW~~Gi~~Q~ 327 (504)
T PRK14716 252 ----GGQPFDSDSLTEDYDIGLRLKRAGFRQIFVRVRADDTTDRPDRRGEPIATREFFPDTFKAAVRQKARWIYGIAFQG 327 (504)
T ss_pred ----CCCCCCCCCcchHHHHHHHHHHCCCEEEEecccccccccccccccccccccccCccCHHHHHHHHHHHHhchHHhh
Confidence 13 3999999999999999999999999997531 1245789999999999999999995 787
Q ss_pred HHhh-c-cccccccCcccccchhhhhhhhh
Q 012538 226 FLSK-Y-CPFIYGHGKIKFGAQMGYCNYLL 253 (461)
Q Consensus 226 ~~~~-~-~p~~~~~~~l~~~qrl~y~~~~~ 253 (461)
..+. + .++. .+.+.+++|.+.+...+
T Consensus 328 ~~~~gw~~~~~--~~~~~~rdr~~~~~~~~ 355 (504)
T PRK14716 328 WERLGWKGPAA--TKYMLWRDRKGLLTNLL 355 (504)
T ss_pred HHhcCCCCchh--hhhhHHHHHHHHHHHHH
Confidence 6532 0 1111 23466777777665433
No 20
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.89 E-value=5.8e-22 Score=218.22 Aligned_cols=170 Identities=16% Similarity=0.226 Sum_probs=125.2
Q ss_pred CCChHHHHHHHHHhcccc-----CCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccc--
Q 012538 11 HNFKAGAMNALIRVSSVI-----SNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLY-- 83 (461)
Q Consensus 11 ~~~KAGaLN~~l~~~~~~-----s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~-- 83 (461)
.++||+|||++++.+... ...+.++++|||.++ +||+|+ .+.++.++ . ++||.|....+.+.+...
T Consensus 131 ~~gKa~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~~v-~pd~L~-~~~~l~~~----~-~~VQ~p~~p~~~~~~~~~~~ 203 (727)
T PRK11234 131 PTSKADCLNNVLDAITQFERSANFAFAGFILHDAEDVI-SPMELR-LFNYLVER----K-DLIQIPVYPFEREWTHFTSG 203 (727)
T ss_pred CCCHHHHHHHHHHHHHhhhcccCCcccEEEEEcCCCCC-ChhHHH-HHHhhcCC----C-CeEeecccCCCccHHHHHHH
Confidence 358999999999985211 244678899999999 899998 67788764 3 899999663332212112
Q ss_pred --hhHHHHHHHHHHHHHhhcCCcc-ccccceeE-ec--hhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccc
Q 012538 84 --ANSYLVVNQVELAGIGSYDAAL-YCGTGCFH-RR--ESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYE 157 (461)
Q Consensus 84 --~~~~~~f~~~~~~g~~~~~~~~-~~Gtg~~~-RR--~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye 157 (461)
..+....+...+++++.+++++ +.|+|+.| || ++|.+.
T Consensus 204 ~~~~EFa~~~~~~~~~~~~lgg~~~l~G~~~af~Rr~l~al~~~------------------------------------ 247 (727)
T PRK11234 204 TYIDEFAELHGKDVPVREALAGQVPSAGVGTCFSRRAVTALLED------------------------------------ 247 (727)
T ss_pred HHHHHHHHHhhhhhHHHHHcCCCcccCCceEEEecccHHHHHHh------------------------------------
Confidence 2233333445678889997765 58999999 55 345331
Q ss_pred cccccccccCCCCCCccchHHHHHHHHhcCCeEEEeCCCC---------------------CceecccCCCHHHHHHhhh
Q 012538 158 KNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNK---------------------PAFLGVAPVTLDIALVQMK 216 (461)
Q Consensus 158 ~~t~wg~~~G~~~~~vtED~~t~~~l~~~Gwrs~y~~~~~---------------------~~~~g~~P~~l~~~~~Qr~ 216 (461)
|...+|+.+++|||+++|++|+.+||+++|++.+. .+++++.|+|++++++||.
T Consensus 248 -----ggg~~~~~~~lTED~dlg~rL~~~G~~v~f~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~t~~~~~rQR~ 322 (727)
T PRK11234 248 -----GDGIAFDVQSLTEDYDIGFRLKEKGMREIFVRFPVVDEAKEREQRKFLQHARTSNMICVREYFPDTFSAAVRQKS 322 (727)
T ss_pred -----cCCCCcCCCcchHHHHHHHHHHHCCCEEEEcccccccccccccccccccccccccceEEEEeCchhHHHHHHHHH
Confidence 00015999999999999999999999999998211 3477889999999999999
Q ss_pred hhcch-hHHHHHh
Q 012538 217 RWSEG-MFQIFLS 228 (461)
Q Consensus 217 RWa~G-~lqi~~~ 228 (461)
||..| .+|.+..
T Consensus 323 RW~~G~~~q~~~~ 335 (727)
T PRK11234 323 RWIIGIVFQGFKT 335 (727)
T ss_pred HHHcccHHHHHHH
Confidence 99999 6887653
No 21
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=99.88 E-value=3e-22 Score=191.92 Aligned_cols=157 Identities=23% Similarity=0.318 Sum_probs=123.7
Q ss_pred CCCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchhH---
Q 012538 10 PHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANS--- 86 (461)
Q Consensus 10 ~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~--- 86 (461)
+.|+|++|+|.|++. +++|||+++|+|+++ +|++|+++..++.|| +++.||.+..+.|.+.+ .....
T Consensus 71 ~~G~k~~a~n~g~~~----a~~~~i~~~DaD~~~-~~~~l~~~~~~~~~~----~v~~v~~~~~~~~~~~~-~~~~~~~~ 140 (232)
T cd06437 71 RTGYKAGALAEGMKV----AKGEYVAIFDADFVP-PPDFLQKTPPYFADP----KLGFVQTRWGHINANYS-LLTRVQAM 140 (232)
T ss_pred CCCCchHHHHHHHHh----CCCCEEEEEcCCCCC-ChHHHHHhhhhhcCC----CeEEEecceeeEcCCCc-hhhHhhhh
Confidence 456799999999997 789999999999999 899999987777665 79999987766554332 11111
Q ss_pred -HHHHHHHHHHHHhhcCCc-cccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhccccccccccccc
Q 012538 87 -YLVVNQVELAGIGSYDAA-LYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGK 164 (461)
Q Consensus 87 -~~~f~~~~~~g~~~~~~~-~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~ 164 (461)
....+...+.+....+.. .++|+++++||+++..+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~v------------------------------------------- 177 (232)
T cd06437 141 SLDYHFTIEQVARSSTGLFFNFNGTAGVWRKECIEDA------------------------------------------- 177 (232)
T ss_pred hHHhhhhHhHhhHhhcCCeEEeccchhhhhHHHHHHh-------------------------------------------
Confidence 111233333344333433 35899999999999754
Q ss_pred ccCCCCCCccchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHHHHHHhhhhhcchh
Q 012538 165 EMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGM 222 (461)
Q Consensus 165 ~~G~~~~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G~ 222 (461)
|||+..+..||++++.|++.+||+++|++. +.++.+.|+|+.++++||+||++|.
T Consensus 178 -gg~~~~~~~ED~~l~~rl~~~G~~~~~~~~--~~v~~~~~~~~~~~~~q~~rW~~g~ 232 (232)
T cd06437 178 -GGWNHDTLTEDLDLSYRAQLKGWKFVYLDD--VVVPAELPASMSAYRSQQHRWSKGP 232 (232)
T ss_pred -CCCCCCcchhhHHHHHHHHHCCCeEEEecc--ceeeeeCCcCHHHHHHHHHHhccCC
Confidence 889988899999999999999999999975 4678999999999999999999983
No 22
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.87 E-value=6.9e-22 Score=188.27 Aligned_cols=164 Identities=33% Similarity=0.502 Sum_probs=136.2
Q ss_pred CCCCCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcc----cc
Q 012538 8 GCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKND----LY 83 (461)
Q Consensus 8 ~~~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d----~~ 83 (461)
..+.++|+||+|.|++. +++|||+++|+|.++ +|++|++++..+.+ +++++.|++++.+.+.+..+ .+
T Consensus 66 ~~~~~~~~~~~n~~~~~----a~~d~i~~lD~D~~~-~~~~l~~l~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~ 137 (234)
T cd06421 66 PDNRHAKAGNLNNALAH----TTGDFVAILDADHVP-TPDFLRRTLGYFLD---DPKVALVQTPQFFYNPDPFDWLADGA 137 (234)
T ss_pred CCCCCCcHHHHHHHHHh----CCCCEEEEEccccCc-CccHHHHHHHHHhc---CCCeEEEecceEEecCCcchhHHHHH
Confidence 34678999999999997 789999999999999 89999999999975 24799999998887664431 12
Q ss_pred hhHHHHHHHHHHHHHhhcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccccccccc
Q 012538 84 ANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWG 163 (461)
Q Consensus 84 ~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg 163 (461)
......++..+..+.+.++...++|++.++||+++..+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~~~i------------------------------------------ 175 (234)
T cd06421 138 PNEQELFYGVIQPGRDRWGAAFCCGSGAVVRREALDEI------------------------------------------ 175 (234)
T ss_pred HHHHHHHHHHHHHHHhhcCCceecCceeeEeHHHHHHh------------------------------------------
Confidence 22334455555566666667778999999999999753
Q ss_pred cccCCCCCCccchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHHHHHHhhhhhcchhHHH
Q 012538 164 KEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQI 225 (461)
Q Consensus 164 ~~~G~~~~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G~lqi 225 (461)
+||+.....||++++.+++.+||+++|++.. .+.++.|+++.++++||.||.+|.+|+
T Consensus 176 --g~~~~~~~~eD~~l~~r~~~~g~~i~~~~~~--~~~~~~~~~~~~~~~q~~rw~~~~~~~ 233 (234)
T cd06421 176 --GGFPTDSVTEDLATSLRLHAKGWRSVYVPEP--LAAGLAPETLAAYIKQRLRWARGMLQI 233 (234)
T ss_pred --CCCCccceeccHHHHHHHHHcCceEEEecCc--cccccCCccHHHHHHHHHHHhcCCeee
Confidence 7898888999999999999999999999864 568999999999999999999999885
No 23
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=99.87 E-value=1.1e-21 Score=188.00 Aligned_cols=166 Identities=24% Similarity=0.356 Sum_probs=127.5
Q ss_pred CCCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchhHH--
Q 012538 10 PHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSY-- 87 (461)
Q Consensus 10 ~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~-- 87 (461)
+.|+|+||+|.|++.+. .++|+|+++|+|..+ +|++|.+++..|.++ +++.|+++..+.+... .++....
T Consensus 66 ~~G~~~~a~n~g~~~a~--~~~d~i~~lD~D~~~-~~~~l~~l~~~~~~~----~~~~v~~~~~~~~~~~-~~~~~~~~~ 137 (236)
T cd06435 66 LPGAKAGALNYALERTA--PDAEIIAVIDADYQV-EPDWLKRLVPIFDDP----RVGFVQAPQDYRDGEE-SLFKRMCYA 137 (236)
T ss_pred CCCCchHHHHHHHHhcC--CCCCEEEEEcCCCCc-CHHHHHHHHHHhcCC----CeeEEecCccccCCCc-cHHHHHHhH
Confidence 45679999999999843 458999999999999 799999999998654 7899998876554322 1221111
Q ss_pred --HHHHHHHHHHHhhcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccccccccccc
Q 012538 88 --LVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKE 165 (461)
Q Consensus 88 --~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~ 165 (461)
..++..........+..++.|+++++||+++..+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~i-------------------------------------------- 173 (236)
T cd06435 138 EYKGFFDIGMVSRNERNAIIQHGTMCLIRRSALDDV-------------------------------------------- 173 (236)
T ss_pred HHHHHHHHHhccccccCceEEecceEEEEHHHHHHh--------------------------------------------
Confidence 1111111112222334456889899999999753
Q ss_pred cCCCCCCccchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHHHHHHhhhhhcchhHHHHHhh
Q 012538 166 MGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSK 229 (461)
Q Consensus 166 ~G~~~~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G~lqi~~~~ 229 (461)
|||+.+...||+++++|++.+||++.|++.. ..+...|+|+.++++||.||++|.+|++.++
T Consensus 174 Ggf~~~~~~eD~dl~~r~~~~G~~~~~~~~~--~~~~~~~~~~~~~~~q~~rw~~g~~~~~~~~ 235 (236)
T cd06435 174 GGWDEWCITEDSELGLRMHEAGYIGVYVAQS--YGHGLIPDTFEAFKKQRFRWAYGAVQILKKH 235 (236)
T ss_pred CCCCCccccchHHHHHHHHHCCcEEEEcchh--hccCcCcccHHHHHHHHHHHhcchhhhhhcc
Confidence 8899888999999999999999999999753 5578999999999999999999999998754
No 24
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=99.87 E-value=2.3e-21 Score=187.36 Aligned_cols=165 Identities=23% Similarity=0.289 Sum_probs=132.2
Q ss_pred CCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCccc---chhHH
Q 012538 11 HNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDL---YANSY 87 (461)
Q Consensus 11 ~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~---~~~~~ 87 (461)
..+|++|+|.|++. ++||||+.+|+|+++ +|+++.+++.+|.+ .+++++.||.+..+.+...+-. +..+.
T Consensus 69 ~~G~~~a~n~g~~~----a~gd~i~~~DaD~~~-~~~~l~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (241)
T cd06427 69 PRTKPKACNYALAF----ARGEYVVIYDAEDAP-DPDQLKKAVAAFAR--LDDKLACVQAPLNYYNARENWLTRMFALEY 141 (241)
T ss_pred CCchHHHHHHHHHh----cCCCEEEEEcCCCCC-ChHHHHHHHHHHHh--cCCCEEEEeCceEeeCCCccHHHHHHHHHH
Confidence 35899999999997 889999999999999 89999999999963 2358999998887776532210 11122
Q ss_pred HHHHHHHHHHHhhcCCcc-ccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhccccccccccccccc
Q 012538 88 LVVNQVELAGIGSYDAAL-YCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEM 166 (461)
Q Consensus 88 ~~f~~~~~~g~~~~~~~~-~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~ 166 (461)
...++...++....+.+. ++|++.++||+++.++ |
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~v--------------------------------------------g 177 (241)
T cd06427 142 AAWFDYLLPGLARLGLPIPLGGTSNHFRTDVLREL--------------------------------------------G 177 (241)
T ss_pred HHHHHHHHHHHHhcCCeeecCCchHHhhHHHHHHc--------------------------------------------C
Confidence 233444555666556554 4788999999999764 8
Q ss_pred CCCCCCccchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHHHHHHhhhhhcchhHHHHHhh
Q 012538 167 GLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSK 229 (461)
Q Consensus 167 G~~~~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G~lqi~~~~ 229 (461)
||+....+||+++++|++.+|||+++++. .++++.|+|++++++||.||++|.+|++..+
T Consensus 178 g~~~~~~~eD~~l~~rl~~~G~r~~~~~~---~~~~~~~~~~~~~~~q~~Rw~~g~~~~~~~~ 237 (241)
T cd06427 178 GWDPFNVTEDADLGLRLARAGYRTGVLNS---TTLEEANNALGNWIRQRSRWIKGYMQTWLVH 237 (241)
T ss_pred CCCcccchhhHHHHHHHHHCCceEEEecc---cccccCcHhHHHHHHHHHHHhccHHHHHHHH
Confidence 89888899999999999999999999964 3468999999999999999999999999753
No 25
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=99.83 E-value=7.2e-20 Score=170.50 Aligned_cols=137 Identities=24% Similarity=0.325 Sum_probs=110.6
Q ss_pred EEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchhHHHHHHH----HHHHHHhhcCCc-ccc
Q 012538 33 VILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVNQ----VELAGIGSYDAA-LYC 107 (461)
Q Consensus 33 ~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~----~~~~g~~~~~~~-~~~ 107 (461)
+|+++|+|+.+ +||++++++.++.|| ++++||+|..+.|. ++...+.+...+. ......+..+.+ .+.
T Consensus 1 ~v~~~DaDt~~-~~d~l~~~~~~~~~~----~~~~vq~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (193)
T PF13632_consen 1 YVLFLDADTRL-PPDFLERLVAALEDP----KVDAVQGPIIFRNR--GSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLS 73 (193)
T ss_pred CEEEEcCCCCC-ChHHHHHHHHHHhCC----CceEEEccEEecCC--CChhheeehhhhhhhhhhhHHHHHhcCCCcccc
Confidence 58999999999 799999999999866 79999999998643 3333333333332 112233445543 468
Q ss_pred ccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccccccccccccCCC-CCCccchHHHHHHHHhc
Q 012538 108 GTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLV-YGCAAEDVVTGLTIQCR 186 (461)
Q Consensus 108 Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~G~~-~~~vtED~~t~~~l~~~ 186 (461)
|+|.++||+++.++ |||+ ..+++||.++++++..+
T Consensus 74 G~~~~~r~~~l~~v--------------------------------------------g~~~~~~~~~ED~~l~~~l~~~ 109 (193)
T PF13632_consen 74 GSGMLFRREALREV--------------------------------------------GGFDDPFSIGEDMDLGFRLRRA 109 (193)
T ss_pred CcceeeeHHHHHHh--------------------------------------------CcccccccccchHHHHHHHHHC
Confidence 99999999999753 7899 88999999999999999
Q ss_pred CCeEEEeCCCCCceecccCCCHHHHHHhhhhhcchh
Q 012538 187 GWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGM 222 (461)
Q Consensus 187 Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G~ 222 (461)
|||+.|+++. .++.++|+|+.++++||+||..|.
T Consensus 110 G~~~~~~~~~--~~~~~~p~t~~~~~~Qr~RW~~g~ 143 (193)
T PF13632_consen 110 GYRIVYVPDA--IVYTEAPPTFRAFIRQRRRWARGA 143 (193)
T ss_pred CCEEEEeccc--ceeeeCCCCHHHHHHHHHHHHhhh
Confidence 9999999763 568999999999999999999997
No 26
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.82 E-value=5.6e-21 Score=181.88 Aligned_cols=152 Identities=26% Similarity=0.302 Sum_probs=101.2
Q ss_pred ChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchhHHHHHH-
Q 012538 13 FKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVN- 91 (461)
Q Consensus 13 ~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~- 91 (461)
+|++|+|.+++. .++|+|+++|+|+++ +|++|++++.+|.|| +++.||++....+ +++ .+......++
T Consensus 73 ~k~~a~n~~~~~----~~~d~i~~lD~D~~~-~p~~l~~~~~~~~~~----~~~~v~~~~~~~~-~~~-~~~~~~~~~~~ 141 (228)
T PF13641_consen 73 GKARALNEALAA----ARGDYILFLDDDTVL-DPDWLERLLAAFADP----GVGAVGGPVFPDN-DRN-WLTRLQDLFFA 141 (228)
T ss_dssp HHHHHHHHHHHH-------SEEEEE-SSEEE--CHHHHHHHHHHHBS----S--EEEEEEEETT-CCC-EEEE-TT--S-
T ss_pred hHHHHHHHHHHh----cCCCEEEEECCCcEE-CHHHHHHHHHHHHhC----CCCeEeeeEeecC-CCC-HHHHHHHHHHh
Confidence 699999999998 779999999999999 899999999999766 7999998886654 222 1211111111
Q ss_pred ---HHHHHHHhhcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccccccccccccCC
Q 012538 92 ---QVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGL 168 (461)
Q Consensus 92 ---~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~G~ 168 (461)
.....+....+..+++|+++++||+++.+. |||
T Consensus 142 ~~~~~~~~~~~~~~~~~~~G~~~~~rr~~~~~~--------------------------------------------g~f 177 (228)
T PF13641_consen 142 RWHLRFRSGRRALGVAFLSGSGMLFRRSALEEV--------------------------------------------GGF 177 (228)
T ss_dssp EETTTS-TT-B----S-B--TEEEEEHHHHHHH---------------------------------------------S-
T ss_pred hhhhhhhhhhcccceeeccCcEEEEEHHHHHHh--------------------------------------------CCC
Confidence 011222333455567899999999999642 789
Q ss_pred CCCCccchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHHHHHHhhhhhcch
Q 012538 169 VYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEG 221 (461)
Q Consensus 169 ~~~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G 221 (461)
+.....||.+++.+++.+||++.|++. +.++.+.|.|++++++||.||++|
T Consensus 178 d~~~~~eD~~l~~r~~~~G~~~~~~~~--~~v~~~~~~~~~~~~~q~~RW~~g 228 (228)
T PF13641_consen 178 DPFILGEDFDLCLRLRAAGWRIVYAPD--ALVYHEEPSSLKAFFKQRFRWSRG 228 (228)
T ss_dssp -SSSSSHHHHHHHHHHHTT--EEEEEE--EEEEE--SSSTHHHHHHHHHHH--
T ss_pred CCCCcccHHHHHHHHHHCCCcEEEECC--cEEEEeCCCCHHHHHHHHhccCcC
Confidence 988889999999999999999999975 467899999999999999999988
No 27
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=99.79 E-value=2.6e-19 Score=173.93 Aligned_cols=171 Identities=19% Similarity=0.053 Sum_probs=112.7
Q ss_pred HHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhh-cccCCCcEEEEecCcccccCCCcccchhHHHHHH---H
Q 012538 17 AMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLL-DEKREHEIAFVQHPQRFDNICKNDLYANSYLVVN---Q 92 (461)
Q Consensus 17 aLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~-d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~---~ 92 (461)
++|.++.. +++|||+++|||+++ +|++|++++.+|. || +++.|++.+...|...+ .....+..-| .
T Consensus 64 ~~~~~~~~----a~~e~i~~~DaD~~~-~~~~l~~l~~~~~~~p----~vg~v~g~~~~~~~~~~-~~~~~q~~ey~~~~ 133 (244)
T cd04190 64 YFCRVLFP----DDPEFILLVDADTKF-DPDSIVQLYKAMDKDP----EIGGVCGEIHPMGKKQG-PLVMYQVFEYAISH 133 (244)
T ss_pred HHHHHhhc----CCCCEEEEECCCCcC-CHhHHHHHHHHHHhCC----CEEEEEeeeEEcCCcch-hHHHhHheehhhhh
Confidence 44555553 789999999999999 8999999999984 55 79999988877664322 2221111111 1
Q ss_pred H-HHHHHhhcCCc-cccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccccccccccccCCCC
Q 012538 93 V-ELAGIGSYDAA-LYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVY 170 (461)
Q Consensus 93 ~-~~~g~~~~~~~-~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~G~~~ 170 (461)
. .......++.. ++.|++.+|||+++.+...... .+..+.|..++.-. ..+...
T Consensus 134 ~~~~~~~s~~g~~~~~~G~~~~~R~~~l~~~~~~~~-----------------------~~~~~~~~~~~~~~-~~~~~~ 189 (244)
T cd04190 134 WLDKAFESVFGFVTCLPGCFSMYRIEALKGDNGGKG-----------------------PLLDYAYLTNTVDS-LHKKNN 189 (244)
T ss_pred hhcccHHHcCCceEECCCceEEEEehhhcCCccccc-----------------------cchhhccccCcccc-hHHHHH
Confidence 1 11223334443 4579999999999976410000 00000010000000 011223
Q ss_pred CCccchHHHHHHHHhcCCeEEE--eCCCCCceecccCCCHHHHHHhhhhhcchhH
Q 012538 171 GCAAEDVVTGLTIQCRGWKSMY--FKPNKPAFLGVAPVTLDIALVQMKRWSEGMF 223 (461)
Q Consensus 171 ~~vtED~~t~~~l~~~Gwrs~y--~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G~l 223 (461)
.+++||.+++++|..+||++.| ++. +.++.++|+|++++++||.||++|++
T Consensus 190 ~~~~ED~~l~~~l~~~G~~~~~~~~~~--a~~~~~~p~s~~~~~~QR~RW~~g~~ 242 (244)
T cd04190 190 LDLGEDRILCTLLLKAGPKRKYLYVPG--AVAETDVPETFVELLSQRRRWINSTI 242 (244)
T ss_pred HhHhcccceeHHHhccCCccEEEEecc--cEEEEECCCCHHHHHHHhHhhhcccc
Confidence 4689999999999999999999 765 46689999999999999999999986
No 28
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.77 E-value=3.6e-17 Score=178.68 Aligned_cols=176 Identities=18% Similarity=0.125 Sum_probs=126.2
Q ss_pred CCCCCCChHHHHHHHHHhcc---ccCCCC--EEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcc
Q 012538 7 PGCPHNFKAGAMNALIRVSS---VISNGP--VILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKND 81 (461)
Q Consensus 7 p~~~~~~KAGaLN~~l~~~~---~~s~~~--~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d 81 (461)
|.....+||.|||++++.+- ....++ .|+++|||.+| +|++|+.. .++.+. + .+||.|..-...+...
T Consensus 135 ~~~gp~gKa~ALN~~l~~~~~~e~~~~~~fa~vvi~DAEd~~-~P~~L~~~-~~~~~~---~--~~iQ~pV~~~~~~~~~ 207 (703)
T PRK15489 135 PHDGPTCKADCLNWIIQAIFRYEAGHGIEFAGVILHDSEDVL-HPLELKYF-NYLLPR---K--DLVQLPVLSLERKWYE 207 (703)
T ss_pred CCCCCCCHHHHHHHHHHHHHhhhhhccCccceEEEEcCCCCC-ChhHHHHH-HhhcCC---c--ceeeeeeccCCCcccc
Confidence 33334679999999998741 012333 49999999999 99999754 566543 1 4689874211111111
Q ss_pred ----cchhHHHHHHHHHHHHHhhcCCcc-ccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhccccc
Q 012538 82 ----LYANSYLVVNQVELAGIGSYDAAL-YCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSY 156 (461)
Q Consensus 82 ----~~~~~~~~f~~~~~~g~~~~~~~~-~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~y 156 (461)
.|..|....++..+.++..+++++ ..|+|+.|||++|..+ +++
T Consensus 208 ~l~~~~~~Efa~~~~~~l~~r~~l~~~ipl~Gv~~~frr~aL~~l-----------------------~~~--------- 255 (703)
T PRK15489 208 WVAGTYMDEFAEWHQKDLVVRESLTGTVPSAGVGTCFSRRALLAL-----------------------MKE--------- 255 (703)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHcCCceeccCcceeeeHHHHHHH-----------------------HHh---------
Confidence 244566666777888999998876 4899999999998532 111
Q ss_pred ccccccccccCCCCCCccchHHHHHHHHhcCCeEEEeCC---------------------CCCceecccCCCHHHHHHhh
Q 012538 157 EKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKP---------------------NKPAFLGVAPVTLDIALVQM 215 (461)
Q Consensus 157 e~~t~wg~~~G~~~~~vtED~~t~~~l~~~Gwrs~y~~~---------------------~~~~~~g~~P~~l~~~~~Qr 215 (461)
..| .+|+.+++|||+++|+||+.+|||+.|+.- ...+.+...|.++.+.++||
T Consensus 256 ---gg~---~~~n~~sLTED~Dlg~RL~~~G~r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~tre~fP~~~~a~~rQk 329 (703)
T PRK15489 256 ---RGN---QPFNTSSLTEDYDFSFRLAELGMQEIFVRFPVQFRVRRTSWFGPRRERTREMLLCVREYFPDTFRTAYRQK 329 (703)
T ss_pred ---cCC---CCCCCCCchHhHHHHHHHHHCCCceEEEEEeccccccccccccccccccccCceeehhhCcHHHHHHHHHH
Confidence 001 258889999999999999999999999321 12356788999999999999
Q ss_pred hhhcchhH-HHHH
Q 012538 216 KRWSEGMF-QIFL 227 (461)
Q Consensus 216 ~RWa~G~l-qi~~ 227 (461)
.||..|-. |-..
T Consensus 330 ~RW~~Gi~~q~~~ 342 (703)
T PRK15489 330 ARWVLGIAFQGWE 342 (703)
T ss_pred HHHHhHHHHhhHH
Confidence 99999988 7543
No 29
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.74 E-value=2.1e-17 Score=156.39 Aligned_cols=156 Identities=20% Similarity=0.184 Sum_probs=116.8
Q ss_pred CCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchh--HHH
Q 012538 11 HNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYAN--SYL 88 (461)
Q Consensus 11 ~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~--~~~ 88 (461)
..+|+.|+|.+++. +++|+|+++|+|+++ +|++|++++..+.++ ..+.|+.+..+... +..... ...
T Consensus 67 ~~g~~~a~n~g~~~----~~~d~i~~~D~D~~~-~~~~l~~l~~~~~~~----~~~~v~~~~~~~~~--~~~~~~~~~~~ 135 (229)
T cd04192 67 ISGKKNALTTAIKA----AKGDWIVTTDADCVV-PSNWLLTFVAFIQKE----QIGLVAGPVIYFKG--KSLLAKFQRLD 135 (229)
T ss_pred cchhHHHHHHHHHH----hcCCEEEEECCCccc-CHHHHHHHHHHhhcC----CCcEEeeeeeecCC--ccHHHHHHHHH
Confidence 46899999999997 789999999999999 899999999988654 45677777765521 111111 111
Q ss_pred H-HHHHHHHHHhhcCCc-cccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhccccccccccccccc
Q 012538 89 V-VNQVELAGIGSYDAA-LYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEM 166 (461)
Q Consensus 89 ~-f~~~~~~g~~~~~~~-~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~ 166 (461)
. .......+...++.+ .++|++.++||+++..+ |
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~~--------------------------------------------g 171 (229)
T cd04192 136 WLSLLGLIAGSFGLGKPFMCNGANMAYRKEAFFEV--------------------------------------------G 171 (229)
T ss_pred HHHHHHHHhhHHHhcCccccccceEEEEHHHHHHh--------------------------------------------c
Confidence 1 111122223334444 45788899999999753 8
Q ss_pred CCCC--CCccchHHHHHHHHhcCC-eEEEeCCCCCceecccCCCHHHHHHhhhhhcch
Q 012538 167 GLVY--GCAAEDVVTGLTIQCRGW-KSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEG 221 (461)
Q Consensus 167 G~~~--~~vtED~~t~~~l~~~Gw-rs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G 221 (461)
||++ ...+||.++.++++.+|| ++.|++.+...+....|.+++++++||+||++|
T Consensus 172 gf~~~~~~~~eD~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~Rw~~g 229 (229)
T cd04192 172 GFEGNDHIASGDDELLLAKVASKYPKVAYLKNPEALVTTQPVTSWKELLNQRKRWASK 229 (229)
T ss_pred CCccccccccCCHHHHHHHHHhCCCCEEEeeCcchheecCCchhHHHHHHHHHHhhcC
Confidence 8975 367899999999999999 998886544566889999999999999999987
No 30
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.74 E-value=9.3e-18 Score=160.25 Aligned_cols=168 Identities=20% Similarity=0.165 Sum_probs=119.3
Q ss_pred CCCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchhHHHH
Q 012538 10 PHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLV 89 (461)
Q Consensus 10 ~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~ 89 (461)
++++|++|+|.|++. +++|+|+++|+|.++ +|++|++++..|.|+ +++.|++.+...+.+.+ .+......
T Consensus 61 ~~~g~~~a~n~g~~~----a~~d~v~~lD~D~~~-~~~~l~~l~~~~~~~----~v~~v~~~~~~~~~~~~-~~~~~~~~ 130 (235)
T cd06434 61 PHPGKRRALAEGIRH----VTTDIVVLLDSDTVW-PPNALPEMLKPFEDP----KVGGVGTNQRILRPRDS-KWSFLAAE 130 (235)
T ss_pred CCCChHHHHHHHHHH----hCCCEEEEECCCcee-ChhHHHHHHHhccCC----CEeEEcCceEeecCccc-HHHHHHHH
Confidence 356899999999997 789999999999999 899999999999765 79999988877665321 22111111
Q ss_pred HHH----HHHHHHhhcCCc-cccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhccccccccccccc
Q 012538 90 VNQ----VELAGIGSYDAA-LYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGK 164 (461)
Q Consensus 90 f~~----~~~~g~~~~~~~-~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~ 164 (461)
+++ .........++. .+.|.+.++||+++....+..++. ..+
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~~~~~~~~~-------------------------------~~~-- 177 (235)
T cd06434 131 YLERRNEEIRAAMSYDGGVPCLSGRTAAYRTEILKDFLFLEEFT-------------------------------NET-- 177 (235)
T ss_pred HHHHHHHHHHHHHhhCCCEEEccCcHHHHHHHHHhhhhhHHHhh-------------------------------hhh--
Confidence 211 111223333333 346778899999996531100000 000
Q ss_pred ccCCCCCCccchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHHHHHHhhhhhcchhH
Q 012538 165 EMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMF 223 (461)
Q Consensus 165 ~~G~~~~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G~l 223 (461)
.+|+. ....||.+++.+++.+||+.+|++.. .++...|.++.++++||.||++|..
T Consensus 178 ~~~~~-~~~~eD~~l~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~q~~Rw~~~~~ 233 (235)
T cd06434 178 FMGRR-LNAGDDRFLTRYVLSHGYKTVYQYTS--EAYTETPENYKKFLKQQLRWSRSNW 233 (235)
T ss_pred hcCCC-CCcCchHHHHHHHHHCCCeEEEecCC--eEEEEcchhHHHHHHHhhhhhhccc
Confidence 02222 36889999999999999999999764 4567899999999999999999974
No 31
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=99.71 E-value=2.2e-17 Score=154.52 Aligned_cols=121 Identities=20% Similarity=0.193 Sum_probs=104.9
Q ss_pred ChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchhHHHHHHH
Q 012538 13 FKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVNQ 92 (461)
Q Consensus 13 ~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~ 92 (461)
+|++|+|.|++. +++|+++++|+|+.+ +|++|++++..+.|| +++.|++.
T Consensus 73 ~~~~~~n~g~~~----a~~d~i~~~D~D~~~-~~~~l~~l~~~~~~~----~~~~v~~~--------------------- 122 (196)
T cd02520 73 PKVNNLIKGYEE----ARYDILVISDSDISV-PPDYLRRMVAPLMDP----GVGLVTCL--------------------- 122 (196)
T ss_pred HhHHHHHHHHHh----CCCCEEEEECCCceE-ChhHHHHHHHHhhCC----CCCeEEee---------------------
Confidence 589999999997 889999999999999 799999999988765 57777654
Q ss_pred HHHHHHhhcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccccccccccccCCCC--
Q 012538 93 VELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVY-- 170 (461)
Q Consensus 93 ~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~G~~~-- 170 (461)
+..|+++++||+++..+ +||+.
T Consensus 123 ------------~~~g~~~~~r~~~~~~~--------------------------------------------ggf~~~~ 146 (196)
T cd02520 123 ------------CAFGKSMALRREVLDAI--------------------------------------------GGFEAFA 146 (196)
T ss_pred ------------cccCceeeeEHHHHHhc--------------------------------------------cChHHHh
Confidence 46789999999999754 77864
Q ss_pred CCccchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHHHHHHhhhhhcch
Q 012538 171 GCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEG 221 (461)
Q Consensus 171 ~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G 221 (461)
..+.||++++.++..+||++.|++. +.+..+.|.+++++++||.||++.
T Consensus 147 ~~~~eD~~l~~rl~~~G~~i~~~~~--~~~~~~~~~~~~~~~~q~~rw~~~ 195 (196)
T cd02520 147 DYLAEDYFLGKLIWRLGYRVVLSPY--VVMQPLGSTSLASFWRRQLRWSRT 195 (196)
T ss_pred HHHHHHHHHHHHHHHcCCeEEEcch--heeccCCcccHHHHHHHHHHHhcc
Confidence 3568999999999999999999976 366789999999999999999863
No 32
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.70 E-value=8.4e-17 Score=166.12 Aligned_cols=155 Identities=17% Similarity=0.173 Sum_probs=113.9
Q ss_pred CChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchhHHHHHH
Q 012538 12 NFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVN 91 (461)
Q Consensus 12 ~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~ 91 (461)
++|++|+|++++. +++|+++++|||.++ +||+|++++..|.|| +++.|+++....+ .+..+......+.
T Consensus 112 ~~K~~~l~~~~~~----a~ge~i~~~DaD~~~-~p~~L~~lv~~~~~~----~v~~V~~~~~~~~--~~~~~~~l~~~~~ 180 (373)
T TIGR03472 112 NRKVSNLINMLPH----ARHDILVIADSDISV-GPDYLRQVVAPLADP----DVGLVTCLYRGRP--VPGFWSRLGAMGI 180 (373)
T ss_pred ChHHHHHHHHHHh----ccCCEEEEECCCCCc-ChhHHHHHHHHhcCC----CcceEeccccCCC--CCCHHHHHHHHHh
Confidence 4699999999987 899999999999999 899999999999776 6899987643222 1122211111111
Q ss_pred H-HHHHH---HhhcCC-ccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhccccccccccccccc
Q 012538 92 Q-VELAG---IGSYDA-ALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEM 166 (461)
Q Consensus 92 ~-~~~~g---~~~~~~-~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~ 166 (461)
. ...++ .+..+. .++.|++.++||++++++ |
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~G~~~a~RR~~l~~i--------------------------------------------G 216 (373)
T TIGR03472 181 NHNFLPSVMVARALGRARFCFGATMALRRATLEAI--------------------------------------------G 216 (373)
T ss_pred hhhhhHHHHHHHhccCCccccChhhheeHHHHHHc--------------------------------------------C
Confidence 0 01111 122233 346799899999999764 8
Q ss_pred CCCC--CCccchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHHHHHHhhhhhcchhH
Q 012538 167 GLVY--GCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMF 223 (461)
Q Consensus 167 G~~~--~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G~l 223 (461)
||+. ++++||++++.+++.+||++.+++.. ......|+|++++++||.||++..-
T Consensus 217 Gf~~~~~~~~ED~~l~~~i~~~G~~v~~~~~~--v~~~~~~~s~~~~~~q~~RW~r~~~ 273 (373)
T TIGR03472 217 GLAALAHHLADDYWLGELVRALGLRVVLAPVV--VDTDVHETSFATLLAHELRWSRTIR 273 (373)
T ss_pred ChHHhcccchHHHHHHHHHHHcCCeEEecchh--hhcCCCccCHHHHHHHHHHHHhhhh
Confidence 8884 57899999999999999999998643 4456778999999999999985544
No 33
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.68 E-value=1.6e-14 Score=148.55 Aligned_cols=209 Identities=17% Similarity=0.202 Sum_probs=160.2
Q ss_pred CCCCCCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchhH
Q 012538 7 PGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANS 86 (461)
Q Consensus 7 p~~~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~ 86 (461)
..+|.+-||||+..-.|..| +.+++++++|||++. .+|.+-+++..|+ .+|+.|.+|+-..-.|.+ ..|+..
T Consensus 219 Rr~n~~RKaGNIaDfcrRwG--~~Y~~MlVLDADSvM-tgd~lvrLv~~ME---~~P~aGlIQt~P~~~gg~--TL~AR~ 290 (736)
T COG2943 219 RRRNVKRKAGNIADFCRRWG--SAYSYMLVLDADSVM-TGDCLVRLVRLME---ANPDAGLIQTSPKASGGD--TLYARC 290 (736)
T ss_pred HhhhhcccccCHHHHHHHhC--cccceEEEeeccccc-CchHHHHHHHHHh---hCCCCceeecchhhcCcc--hHHHHH
Confidence 34467889999999999988 999999999999999 7999999999997 566899999876655543 345544
Q ss_pred HHH---HH-HHHHHHHhhcCC--ccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhccccccccc
Q 012538 87 YLV---VN-QVELAGIGSYDA--ALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNT 160 (461)
Q Consensus 87 ~~~---f~-~~~~~g~~~~~~--~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t 160 (461)
+.. .| -+...|...|++ ..|-|.|+++|.++..+ +|....-.
T Consensus 291 qQFatrvYGpl~~~GLawW~~~Es~yWGHNAIIRt~aF~~--------------------------------hcgLp~Lp 338 (736)
T COG2943 291 QQFATRVYGPLFTAGLAWWQLGESHYWGHNAIIRTKAFIE--------------------------------HCGLPPLP 338 (736)
T ss_pred HHHHHHHhchHHhhhhHHHhccccccccccceeechhhHH--------------------------------hcCCCCCC
Confidence 332 23 356678888876 46899999999999843 22221100
Q ss_pred ccccccCCCCCCccchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHHHHHHhhhhhcchhHHHHHhhccccccccCcc
Q 012538 161 HWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYGHGKI 240 (461)
Q Consensus 161 ~wg~~~G~~~~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G~lqi~~~~~~p~~~~~~~l 240 (461)
| ++.|..+.++.|+.-+-.|.+.||.+--.+ +..-.+.|.|.|+.|.++.-.||++|++|-+ +++ +.+++
T Consensus 339 --G-~~pFgG~ilSHDfvEAALmRRaGW~v~ia~-dL~GSyEE~PpnLlD~l~RDRRWC~GNLqh~-----rl~-~~~Gl 408 (736)
T COG2943 339 --G-RGPFGGHILSHDFVEAALMRRAGWGVWIAY-DLDGSYEELPPNLLDELKRDRRWCHGNLQHF-----RLF-LVKGL 408 (736)
T ss_pred --C-CCCCCccccchHHHHHHHHhhcCceEEEec-cCCCchhhCCchHHHHHhhhhHhhhcchhhc-----eee-ccCCc
Confidence 1 256888889999999999999999865543 4567789999999999999999999999933 343 36899
Q ss_pred cccchhhhhhhhhhhhhHHHHHHHH
Q 012538 241 KFGAQMGYCNYLLWAPLSLPTLFYV 265 (461)
Q Consensus 241 ~~~qrl~y~~~~~~~~~~~~~~~~~ 265 (461)
.+..|+.+......++++-..+.++
T Consensus 409 HwvsR~h~~tGVmsYlsaPlWfl~l 433 (736)
T COG2943 409 HWVSRAHFLTGVMSYLSAPLWFLFL 433 (736)
T ss_pred cHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 9999999988777666544443333
No 34
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=99.63 E-value=3.6e-15 Score=138.18 Aligned_cols=154 Identities=17% Similarity=0.160 Sum_probs=116.1
Q ss_pred CCCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchhHH-H
Q 012538 10 PHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSY-L 88 (461)
Q Consensus 10 ~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~-~ 88 (461)
..+.|..||..+++. . .++|++++.|+|..+ +||+|++++..+.|| +++.|.++....+.+ . +.... .
T Consensus 14 g~N~Kv~nL~~~~~~-~--a~~d~~~~~DsDi~v-~p~~L~~lv~~l~~p----~vglVt~~~~~~~~~--~-~~~~l~~ 82 (175)
T PF13506_consen 14 GCNPKVNNLAQGLEA-G--AKYDYLVISDSDIRV-PPDYLRELVAPLADP----GVGLVTGLPRGVPAR--G-FWSRLEA 82 (175)
T ss_pred CCChHHHHHHHHHHh-h--CCCCEEEEECCCeeE-CHHHHHHHHHHHhCC----CCcEEEecccccCCc--C-HHHHHHH
Confidence 357899999999995 2 789999999999999 799999999999887 689998766554432 2 22221 1
Q ss_pred HHHHHHHHHHh-hcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccccccccccccC
Q 012538 89 VVNQVELAGIG-SYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMG 167 (461)
Q Consensus 89 ~f~~~~~~g~~-~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~G 167 (461)
.+......-.. .-+..++.|...++||++|+.. ||
T Consensus 83 ~~~~~~~~~~~a~~~~~~~~G~~m~~rr~~L~~~--------------------------------------------GG 118 (175)
T PF13506_consen 83 AFFNFLPGVLQALGGAPFAWGGSMAFRREALEEI--------------------------------------------GG 118 (175)
T ss_pred HHHhHHHHHHHHhcCCCceecceeeeEHHHHHHc--------------------------------------------cc
Confidence 22221111111 1244677999999999999753 77
Q ss_pred CCC--CCccchHHHHHHHHhcCCeEEEeCCCCCceecccC----CCHHHHHHhhhhhcc
Q 012538 168 LVY--GCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAP----VTLDIALVQMKRWSE 220 (461)
Q Consensus 168 ~~~--~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P----~~l~~~~~Qr~RWa~ 220 (461)
|.. +.++||+.++-+++.+|||++..+.. +.....| .++.++++++.||++
T Consensus 119 ~~~l~~~ladD~~l~~~~~~~G~~v~~~~~~--v~~~~~~~~~~~s~~~~~~r~~RW~r 175 (175)
T PF13506_consen 119 FEALADYLADDYALGRRLRARGYRVVLSPYP--VVQTSVPRTLEDSFRDFFRRQLRWAR 175 (175)
T ss_pred HHHHhhhhhHHHHHHHHHHHCCCeEEEcchh--eeecccCccccccHHHHHHHHHhhcC
Confidence 765 68999999999999999999988642 3345566 489999999999985
No 35
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.61 E-value=5.9e-15 Score=142.62 Aligned_cols=155 Identities=17% Similarity=0.135 Sum_probs=113.2
Q ss_pred CCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchhH-HHH
Q 012538 11 HNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANS-YLV 89 (461)
Q Consensus 11 ~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~-~~~ 89 (461)
..+|++|+|.+++. +++|+|+++|+|+++ +|+++++++..+.|+ +++.|++.....+.+. ...... ...
T Consensus 94 ~~g~~~a~n~gi~~----a~~d~i~~lD~D~~~-~~~~l~~l~~~~~~~----~~~~v~~~~~~~~~~~-~~~~~~~~~~ 163 (251)
T cd06439 94 RRGKAAALNRALAL----ATGEIVVFTDANALL-DPDALRLLVRHFADP----SVGAVSGELVIVDGGG-SGSGEGLYWK 163 (251)
T ss_pred CCChHHHHHHHHHH----cCCCEEEEEccccCc-CHHHHHHHHHHhcCC----CccEEEeEEEecCCcc-cchhHHHHHH
Confidence 45799999999997 788999999999999 799999999999654 6788887665544321 011111 111
Q ss_pred HHHHHHHHHhhcCC-ccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccccccccccccCC
Q 012538 90 VNQVELAGIGSYDA-ALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGL 168 (461)
Q Consensus 90 f~~~~~~g~~~~~~-~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~G~ 168 (461)
+...........+. ....|++.++||+++. ||
T Consensus 164 ~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~-----------------------------------------------~~ 196 (251)
T cd06439 164 YENWLKRAESRLGSTVGANGAIYAIRRELFR-----------------------------------------------PL 196 (251)
T ss_pred HHHHHHHHHHhcCCeeeecchHHHhHHHHhc-----------------------------------------------CC
Confidence 11111111222222 2235555668999884 34
Q ss_pred CCCCccchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHHHHHHhhhhhcchhHH
Q 012538 169 VYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQ 224 (461)
Q Consensus 169 ~~~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G~lq 224 (461)
+.....||.+++.++..+||++.|++.. ..+...|.+..++++|+.||+.|++|
T Consensus 197 ~~~~~~eD~~l~~~~~~~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~r~~~g~~~ 250 (251)
T cd06439 197 PADTINDDFVLPLRIARQGYRVVYEPDA--VAYEEVAEDGSEEFRRRVRIAAGNLQ 250 (251)
T ss_pred CcccchhHHHHHHHHHHcCCeEEecccc--EEEEeCcccHHHHHHHHHHHHhcccc
Confidence 5556789999999999999999998753 56899999999999999999999987
No 36
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.54 E-value=4.3e-14 Score=135.39 Aligned_cols=161 Identities=17% Similarity=0.081 Sum_probs=113.7
Q ss_pred CCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchhHHHHH
Q 012538 11 HNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVV 90 (461)
Q Consensus 11 ~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f 90 (461)
.+++++|+|.|++. +++|+++++|+|.++ +|++|++++..+.++ +...|+.+....+. +.+.......
T Consensus 66 ~~~~~~a~N~g~~~----a~~d~v~~lD~D~~~-~~~~l~~~~~~~~~~----~~~~v~~~~~~~~~---~~~~~~~~~~ 133 (249)
T cd02525 66 KRIQSAGLNIGIRN----SRGDIIIRVDAHAVY-PKDYILELVEALKRT----GADNVGGPMETIGE---SKFQKAIAVA 133 (249)
T ss_pred CCCchHHHHHHHHH----hCCCEEEEECCCccC-CHHHHHHHHHHHhcC----CCCEEecceecCCC---ChHHHHHHHH
Confidence 35689999999997 789999999999999 899999999888765 34445544322211 1111111111
Q ss_pred HH-HHHHH---HhhcC---CccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccccccccc
Q 012538 91 NQ-VELAG---IGSYD---AALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWG 163 (461)
Q Consensus 91 ~~-~~~~g---~~~~~---~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg 163 (461)
+. ....+ ..... .....|.+.++||+++...
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------ 171 (249)
T cd02525 134 QSSPLGSGGSAYRGGAVKIGYVDTVHHGAYRREVFEKV------------------------------------------ 171 (249)
T ss_pred hhchhccCCccccccccccccccccccceEEHHHHHHh------------------------------------------
Confidence 00 00000 01111 2245788889999998643
Q ss_pred cccCCCCC-CccchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHHHHHHhhhhhcchhHHHHHhh
Q 012538 164 KEMGLVYG-CAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSK 229 (461)
Q Consensus 164 ~~~G~~~~-~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G~lqi~~~~ 229 (461)
+||+.. ...||.+++++++.+|+++.|++.. ......|.+++++++|+.||..|..|...++
T Consensus 172 --g~~~~~~~~~eD~~l~~r~~~~G~~~~~~~~~--~~~~~~~~s~~~~~~~~~r~~~~~~~~~~~~ 234 (249)
T cd02525 172 --GGFDESLVRNEDAELNYRLRKAGYKIWLSPDI--RVYYYPRSTLKKLARQYFRYGKWRARTLRKH 234 (249)
T ss_pred --CCCCcccCccchhHHHHHHHHcCcEEEEcCCe--EEEEcCCCCHHHHHHHHHHHhhhhHHHHHhC
Confidence 667654 4579999999999999999999764 4567788999999999999999999988754
No 37
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.41 E-value=8.8e-13 Score=123.15 Aligned_cols=105 Identities=22% Similarity=0.199 Sum_probs=79.5
Q ss_pred CCChHHHHHHHHHhccc-------cCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccc
Q 012538 11 HNFKAGAMNALIRVSSV-------ISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLY 83 (461)
Q Consensus 11 ~~~KAGaLN~~l~~~~~-------~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~ 83 (461)
+.+|++|+|.+++.+.. ..++|+|+++|+|..+ +|++|+++..+|.|| +++.||.+.+++|.+.+ .+
T Consensus 63 ~~Gk~~aln~g~~~~~~~~~~~g~~~~~d~v~~~DaD~~~-~~~~l~~~~~~~~~~----~v~~v~~~~~~~~~~~~-~~ 136 (191)
T cd06436 63 RTGKGDALNAAYDQIRQILIEEGADPERVIIAVIDADGRL-DPNALEAVAPYFSDP----RVAGTQSRVRMYNRHKN-LL 136 (191)
T ss_pred CCCHHHHHHHHHHHHhhhccccccCCCccEEEEECCCCCc-CHhHHHHHHHhhcCC----ceEEEeeeEEEecCCCC-HH
Confidence 45899999999997421 1135899999999999 899999988888766 78999999988876543 22
Q ss_pred h----hHHHHHHHHHHHHHhhcCCccccccceeEechhhcCC
Q 012538 84 A----NSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGA 121 (461)
Q Consensus 84 ~----~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~ 121 (461)
. .+....+..++.++...+...++|+|++|||++|.++
T Consensus 137 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~G~~~~~r~~~l~~v 178 (191)
T cd06436 137 TILQDLEFFIIIAATQSLRALTGTVGLGGNGQFMRLSALDGL 178 (191)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcEEECCeeEEEeHHHHHHh
Confidence 1 1222234566777777776567999999999999753
No 38
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.40 E-value=8.2e-12 Score=129.54 Aligned_cols=156 Identities=15% Similarity=0.060 Sum_probs=104.4
Q ss_pred CCChHHHHHHHHHhcccc-CCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchhH---
Q 012538 11 HNFKAGAMNALIRVSSVI-SNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANS--- 86 (461)
Q Consensus 11 ~~~KAGaLN~~l~~~~~~-s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~--- 86 (461)
..+|+.|+|.+++.+... .++|+++.+|+|+.+ +|+++++++..+.++ +++.|..+.++... +.+...
T Consensus 113 ~~Gk~~A~n~g~~~A~~~~~~gd~llflDaD~~~-~p~~l~~lv~~~~~~----~~~~vs~~~~~~~~---~~~~~~~~~ 184 (384)
T TIGR03469 113 WSGKLWAVSQGIAAARTLAPPADYLLLTDADIAH-GPDNLARLVARARAE----GLDLVSLMVRLRCE---SFWEKLLIP 184 (384)
T ss_pred CcchHHHHHHHHHHHhccCCCCCEEEEECCCCCC-ChhHHHHHHHHHHhC----CCCEEEecccccCC---CHHHHHHHH
Confidence 458999999999983211 119999999999999 799999999999764 23445433332211 111110
Q ss_pred -HHHHHHHHH---HHHhhcC-CccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccccccc
Q 012538 87 -YLVVNQVEL---AGIGSYD-AALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTH 161 (461)
Q Consensus 87 -~~~f~~~~~---~g~~~~~-~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~ 161 (461)
...++.... ...+... .....|.+.++||++++++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~lirr~~~~~v---------------------------------------- 224 (384)
T TIGR03469 185 AFVFFFQKLYPFRWVNDPRRRTAAAAGGCILIRREALERI---------------------------------------- 224 (384)
T ss_pred HHHHHHHHhcchhhhcCCCccceeecceEEEEEHHHHHHc----------------------------------------
Confidence 011111110 1111111 1234788899999999764
Q ss_pred cccccCCCC--CCccchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHHHHHHhhhhhc
Q 012538 162 WGKEMGLVY--GCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWS 219 (461)
Q Consensus 162 wg~~~G~~~--~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa 219 (461)
|||+. ..+.||++++.+++++|+++.+.... ..+....-+++++.++|+.||.
T Consensus 225 ----GGf~~~~~~~~ED~~L~~r~~~~G~~v~~~~~~-~~~s~r~~~~~~~~~~~~~r~~ 279 (384)
T TIGR03469 225 ----GGIAAIRGALIDDCTLAAAVKRSGGRIWLGLAA-RTRSLRPYDGLGEIWRMIARTA 279 (384)
T ss_pred ----CCHHHHhhCcccHHHHHHHHHHcCCcEEEEecC-ceEEEEecCCHHHHHHHHHHhH
Confidence 88875 47899999999999999999988654 2333345579999999999994
No 39
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.31 E-value=4.7e-12 Score=117.00 Aligned_cols=104 Identities=18% Similarity=0.147 Sum_probs=73.4
Q ss_pred CCCChHHHHHHHHHhcc-ccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchh---
Q 012538 10 PHNFKAGAMNALIRVSS-VISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYAN--- 85 (461)
Q Consensus 10 ~~~~KAGaLN~~l~~~~-~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~--- 85 (461)
+..+|++|+|.+++.+. ..+++|+++++|+|+++ +|+++++++..|.+. ...||+.....+...+ .+..
T Consensus 60 ~~~gk~~aln~g~~~a~~~~~~~d~v~~~DaD~~~-~p~~l~~l~~~~~~~-----~~~v~g~~~~~~~~~~-~~~~~~~ 132 (183)
T cd06438 60 ERRGKGYALDFGFRHLLNLADDPDAVVVFDADNLV-DPNALEELNARFAAG-----ARVVQAYYNSKNPDDS-WITRLYA 132 (183)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCC-ChhHHHHHHHHHhhC-----CCeeEEEEeeeCCccC-HHHHHHH
Confidence 45689999999999741 12469999999999999 799999999998642 2457776665554322 1211
Q ss_pred -HHHHHHHHHHHHHhhcCCc-cccccceeEechhhcC
Q 012538 86 -SYLVVNQVELAGIGSYDAA-LYCGTGCFHRRESLSG 120 (461)
Q Consensus 86 -~~~~f~~~~~~g~~~~~~~-~~~Gtg~~~RR~aL~~ 120 (461)
....++.....++..+++. .+.|+|+++||+++..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~ 169 (183)
T cd06438 133 FAFLVFNRLRPLGRSNLGLSCQLGGTGMCFPWAVLRQ 169 (183)
T ss_pred HHHHHHHHHHHHHHHHcCCCeeecCchhhhHHHHHHh
Confidence 1222334455567777765 4689999999999963
No 40
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=99.20 E-value=9.4e-10 Score=117.06 Aligned_cols=168 Identities=18% Similarity=0.136 Sum_probs=107.8
Q ss_pred CCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccch--hHHHHH-HHHHHHHHhhcCCc-
Q 012538 29 SNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYA--NSYLVV-NQVELAGIGSYDAA- 104 (461)
Q Consensus 29 s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~--~~~~~f-~~~~~~g~~~~~~~- 104 (461)
...|||+.+|||+.+ +|+.+.+++.-|. .+++++-|..--+..|...+ .+. +..+.+ -+..+++.+..=|.
T Consensus 200 ~~~~~il~~DaDt~~-~p~~~~~lv~~m~---~d~~i~gvCG~t~i~n~~~s-~~t~~Q~fEY~ish~l~Ka~Es~fG~V 274 (527)
T PF03142_consen 200 DFYEYILMVDADTKF-DPDSVNRLVDAME---RDPKIGGVCGETRIDNKGQS-WWTMYQVFEYAISHHLQKAFESVFGSV 274 (527)
T ss_pred cceEEEEEecCCceE-cHHHHHHHHHHHc---CCCCeEEEeceeEEcCCCCC-HhhheeccchhHHHHHHHHHHHHhCce
Confidence 446999999999999 8999999998885 34478888775555554332 111 112222 24566666665443
Q ss_pred -cccccceeEechhhcCCCC-CccccccccccCCCCcChHHHHHHhchhcccccccccccccccC---CCCCCccchHHH
Q 012538 105 -LYCGTGCFHRRESLSGAKY-PKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMG---LVYGCAAEDVVT 179 (461)
Q Consensus 105 -~~~Gtg~~~RR~aL~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~G---~~~~~vtED~~t 179 (461)
++.|..+++|-+++..... ..... ...+++++ |..+. ..+ ..-..+.||-.+
T Consensus 275 tCLPGcfsmyR~~a~~~~~~~~~p~l-----------~~~~i~~~--------Y~~~~----~dtlh~~nl~~lGEDR~L 331 (527)
T PF03142_consen 275 TCLPGCFSMYRISALMDGDGYWVPLL-----------ISPDIIEK--------YSENP----VDTLHQKNLLDLGEDRWL 331 (527)
T ss_pred eecCCcceeeeeehhccccccccccc-----------cchHHHHH--------Hhhcc----chHHHHHhhhhcchhHHH
Confidence 3468888999999975210 00000 00111111 10000 000 011267899999
Q ss_pred HHHHHhc--CCeEEEeCCCCCceecccCCCHHHHHHhhhhhcchhHHHH
Q 012538 180 GLTIQCR--GWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIF 226 (461)
Q Consensus 180 ~~~l~~~--Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G~lqi~ 226 (461)
+..|.++ |||..|++. +.+++.+|++++.+++||+||..|++--+
T Consensus 332 ttLlLk~~~~~k~~y~~~--A~a~T~aP~t~~vflsQRRRWinSTi~Nl 378 (527)
T PF03142_consen 332 TTLLLKQFPGYKTEYVPS--AVAYTDAPETFSVFLSQRRRWINSTIHNL 378 (527)
T ss_pred HHHHHhhCCCceEEEccc--ccccccCCccHHHHHHHhhhccchhHhhH
Confidence 9777776 899999986 45689999999999999999999998543
No 41
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.08 E-value=4e-10 Score=104.82 Aligned_cols=126 Identities=14% Similarity=0.025 Sum_probs=92.1
Q ss_pred CChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccch----hHH
Q 012538 12 NFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYA----NSY 87 (461)
Q Consensus 12 ~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~----~~~ 87 (461)
.++++|+|.|++. ++||||+++|+|.++ +|+++++++..|.+ ++++++|.+.....+.+...... ...
T Consensus 66 ~G~~~a~N~g~~~----a~gd~i~~lD~Dd~~-~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (201)
T cd04195 66 RGLGKALNEGLKH----CTYDWVARMDTDDIS-LPDRFEKQLDFIEK---NPEIDIVGGGVLEFDSDGNDIGKRRLPTSH 137 (201)
T ss_pred ccHHHHHHHHHHh----cCCCEEEEeCCcccc-CcHHHHHHHHHHHh---CCCeEEEcccEEEECCCCCeeccccCCCCH
Confidence 5899999999997 789999999999999 79999999999862 34678887766554433221110 011
Q ss_pred HHHHHHHHHHHhhcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccccccccccccC
Q 012538 88 LVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMG 167 (461)
Q Consensus 88 ~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~G 167 (461)
....+.. .....++|.+.++||+++... +|
T Consensus 138 ~~~~~~~------~~~~~~~~~~~~~rr~~~~~~--------------------------------------------g~ 167 (201)
T cd04195 138 DDILKFA------RRRSPFNHPTVMFRKSKVLAV--------------------------------------------GG 167 (201)
T ss_pred HHHHHHh------ccCCCCCChHHhhhHHHHHHc--------------------------------------------CC
Confidence 1111111 112234666789999998653 78
Q ss_pred CCCCCccchHHHHHHHHhcCCeEEEeCC
Q 012538 168 LVYGCAAEDVVTGLTIQCRGWKSMYFKP 195 (461)
Q Consensus 168 ~~~~~vtED~~t~~~l~~~Gwrs~y~~~ 195 (461)
|+.....||.++..++..+|+++.|+++
T Consensus 168 ~~~~~~~eD~~~~~r~~~~g~~~~~~~~ 195 (201)
T cd04195 168 YQDLPLVEDYALWARMLANGARFANLPE 195 (201)
T ss_pred cCCCCCchHHHHHHHHHHcCCceecccH
Confidence 8877899999999999999999999875
No 42
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.02 E-value=8.3e-10 Score=102.64 Aligned_cols=123 Identities=15% Similarity=0.080 Sum_probs=87.7
Q ss_pred CCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHh-hcccCCCcEEEEecCcccccCCCc--ccc-hhH
Q 012538 11 HNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFL-LDEKREHEIAFVQHPQRFDNICKN--DLY-ANS 86 (461)
Q Consensus 11 ~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f-~d~~~~~~va~VQ~pq~f~n~~~~--d~~-~~~ 86 (461)
..+++.|+|.|++. +++||++++|+|.++ +|+++++++..+ .+| +++.|.+.......+.. .+. ...
T Consensus 68 ~~g~~~a~n~g~~~----a~~d~i~~ld~D~~~-~~~~l~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~ 138 (202)
T cd04184 68 NGGISAATNSALEL----ATGEFVALLDHDDEL-APHALYEVVKALNEHP----DADLIYSDEDKIDEGGKRSEPFFKPD 138 (202)
T ss_pred CCCHHHHHHHHHHh----hcCCEEEEECCCCcC-ChHHHHHHHHHHHhCC----CCCEEEccHHhccCCCCEeccccCCC
Confidence 46799999999997 789999999999999 899999999988 444 56677665544321111 000 000
Q ss_pred HHHHHHHHHHHHhhcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhccccccccccccccc
Q 012538 87 YLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEM 166 (461)
Q Consensus 87 ~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~ 166 (461)
.. . +......+.|.++++||+++..+ |
T Consensus 139 ~~--~-------~~~~~~~~~~~~~~~~r~~~~~i--------------------------------------------g 165 (202)
T cd04184 139 WS--P-------DLLLSQNYIGHLLVYRRSLVRQV--------------------------------------------G 165 (202)
T ss_pred CC--H-------HHhhhcCCccceEeEEHHHHHHh--------------------------------------------C
Confidence 00 0 00111134567778999999753 7
Q ss_pred CCCCC-CccchHHHHHHHHhcCCeEEEeCC
Q 012538 167 GLVYG-CAAEDVVTGLTIQCRGWKSMYFKP 195 (461)
Q Consensus 167 G~~~~-~vtED~~t~~~l~~~Gwrs~y~~~ 195 (461)
||+.+ ...||.+.++|++.+||+.+|+++
T Consensus 166 gf~~~~~~~eD~~l~~rl~~~g~~~~~~~~ 195 (202)
T cd04184 166 GFREGFEGAQDYDLVLRVSEHTDRIAHIPR 195 (202)
T ss_pred CCCcCcccchhHHHHHHHHhccceEEEccH
Confidence 88765 468999999999999999999975
No 43
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.94 E-value=3.9e-09 Score=97.06 Aligned_cols=128 Identities=16% Similarity=0.038 Sum_probs=89.4
Q ss_pred CCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhh-cccCCCcEEEEecCcccccCCCcccchhHHHH
Q 012538 11 HNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLL-DEKREHEIAFVQHPQRFDNICKNDLYANSYLV 89 (461)
Q Consensus 11 ~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~-d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~ 89 (461)
..++++|+|.|++. +++|||+++|+|..+ .|+.+.+.+..+. ++ +..+|.+...+.+.+........
T Consensus 60 ~~g~~~a~n~~~~~----a~~~~v~~ld~D~~~-~~~~~~~~~~~~~~~~----~~~~v~g~~~~~~~~~~~~~~~~--- 127 (202)
T cd06433 60 DKGIYDAMNKGIAL----ATGDIIGFLNSDDTL-LPGALLAVVAAFAEHP----EVDVVYGDVLLVDENGRVIGRRR--- 127 (202)
T ss_pred CcCHHHHHHHHHHH----cCCCEEEEeCCCccc-CchHHHHHHHHHHhCC----CccEEEeeeEEEcCCCCcccCCC---
Confidence 45799999999997 789999999999999 7999999985543 33 56667665544433222111000
Q ss_pred HHHHHHHHHhhcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccccccccccccCCC
Q 012538 90 VNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLV 169 (461)
Q Consensus 90 f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~G~~ 169 (461)
...............+|++.++||+++... +||+
T Consensus 128 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------~~f~ 161 (202)
T cd06433 128 --PPPFLDKFLLYGMPICHQATFFRRSLFEKY--------------------------------------------GGFD 161 (202)
T ss_pred --CcchhhhHHhhcCcccCcceEEEHHHHHHh--------------------------------------------CCCc
Confidence 000111122233456788899999999753 5576
Q ss_pred CC-CccchHHHHHHHHhcCCeEEEeCCC
Q 012538 170 YG-CAAEDVVTGLTIQCRGWKSMYFKPN 196 (461)
Q Consensus 170 ~~-~vtED~~t~~~l~~~Gwrs~y~~~~ 196 (461)
.+ ..+||.+..+|+..+|++.+++++.
T Consensus 162 ~~~~~~~D~~~~~r~~~~g~~~~~~~~~ 189 (202)
T cd06433 162 ESYRIAADYDLLLRLLLAGKIFKYLPEV 189 (202)
T ss_pred hhhCchhhHHHHHHHHHcCCceEecchh
Confidence 54 5789999999999999999888753
No 44
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.93 E-value=4.9e-09 Score=93.47 Aligned_cols=99 Identities=22% Similarity=0.208 Sum_probs=82.7
Q ss_pred CCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchhHHHHH
Q 012538 11 HNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVV 90 (461)
Q Consensus 11 ~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f 90 (461)
..+|++|+|.+++. +++|+++++|+|.++ .|+++.+++..+.+ .++++++...
T Consensus 59 ~~g~~~a~n~~~~~----~~~~~i~~~D~D~~~-~~~~l~~~~~~~~~---~~~~~~~~~~------------------- 111 (166)
T cd04186 59 NLGFGAGNNQGIRE----AKGDYVLLLNPDTVV-EPGALLELLDAAEQ---DPDVGIVGPK------------------- 111 (166)
T ss_pred CcChHHHhhHHHhh----CCCCEEEEECCCcEE-CccHHHHHHHHHHh---CCCceEEEcc-------------------
Confidence 45899999999997 689999999999999 79999999987653 2367766544
Q ss_pred HHHHHHHHhhcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccccccccccccCCCC
Q 012538 91 NQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVY 170 (461)
Q Consensus 91 ~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~G~~~ 170 (461)
++|++.++||+++... +||+.
T Consensus 112 ---------------~~~~~~~~~~~~~~~~--------------------------------------------~~~~~ 132 (166)
T cd04186 112 ---------------VSGAFLLVRREVFEEV--------------------------------------------GGFDE 132 (166)
T ss_pred ---------------CceeeEeeeHHHHHHc--------------------------------------------CCCCh
Confidence 7888999999999753 67776
Q ss_pred CC--ccchHHHHHHHHhcCCeEEEeCC
Q 012538 171 GC--AAEDVVTGLTIQCRGWKSMYFKP 195 (461)
Q Consensus 171 ~~--vtED~~t~~~l~~~Gwrs~y~~~ 195 (461)
.. ..||.+.+.++..+||++.+++.
T Consensus 133 ~~~~~~eD~~~~~~~~~~g~~i~~~~~ 159 (166)
T cd04186 133 DFFLYYEDVDLCLRARLAGYRVLYVPQ 159 (166)
T ss_pred hhhccccHHHHHHHHHHcCCeEEEccc
Confidence 53 56999999999999999999875
No 45
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.93 E-value=6.7e-09 Score=97.93 Aligned_cols=121 Identities=21% Similarity=0.095 Sum_probs=81.3
Q ss_pred CChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchhHHHHHH
Q 012538 12 NFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVN 91 (461)
Q Consensus 12 ~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~ 91 (461)
.+|++|+|.|++. +++|+|+++|+|.++ +|+++++++..+.++ ....+.....+.+. + ..... .
T Consensus 58 ~g~~~a~n~g~~~----a~~~~i~~~D~D~~~-~~~~l~~l~~~~~~~----~~~~~~~~~~~~~~--~-~~~~~----~ 121 (221)
T cd02522 58 KGRARQMNAGAAA----ARGDWLLFLHADTRL-PPDWDAAIIETLRAD----GAVAGAFRLRFDDP--G-PRLRL----L 121 (221)
T ss_pred cCHHHHHHHHHHh----ccCCEEEEEcCCCCC-ChhHHHHHHHHhhcC----CcEEEEEEeeecCC--c-cchhh----h
Confidence 4699999999997 779999999999999 799999987666543 22323222222221 1 11110 1
Q ss_pred HHHHHHHhhcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccccccccccccCCCCC
Q 012538 92 QVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYG 171 (461)
Q Consensus 92 ~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~G~~~~ 171 (461)
......+.......+.+.|.++||+++..+ |||++.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--------------------------------------------G~fd~~ 157 (221)
T cd02522 122 ELGANLRSRLFGLPYGDQGLFIRRELFEEL--------------------------------------------GGFPEL 157 (221)
T ss_pred hhcccceecccCCCcCCceEEEEHHHHHHh--------------------------------------------CCCCcc
Confidence 111111111222234566788899988653 889988
Q ss_pred CccchHHHHHHHHhcCCeEEE
Q 012538 172 CAAEDVVTGLTIQCRGWKSMY 192 (461)
Q Consensus 172 ~vtED~~t~~~l~~~Gwrs~y 192 (461)
...||++.+.|+..+|++..+
T Consensus 158 ~~~ED~d~~~r~~~~G~~~~~ 178 (221)
T cd02522 158 PLMEDVELVRRLRRRGRPALL 178 (221)
T ss_pred ccccHHHHHHHHHhCCCEEEc
Confidence 899999999999999999866
No 46
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]
Probab=98.90 E-value=3e-08 Score=109.42 Aligned_cols=167 Identities=18% Similarity=0.197 Sum_probs=109.6
Q ss_pred hHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcc-cchhHHHH-HH
Q 012538 14 KAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKND-LYANSYLV-VN 91 (461)
Q Consensus 14 KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d-~~~~~~~~-f~ 91 (461)
|--.+|.+.... +..-+||+.+|+|+.+ +|+++.+++.-|. .+++||-+.. +..|.-..- .+.+..+. .-
T Consensus 426 ~r~~~y~~~~~L--~~~v~~il~vD~dT~~-~P~ai~~lv~~f~---~dp~VggaCG--~I~~~~~~w~v~~Q~FEY~Is 497 (862)
T KOG2571|consen 426 HRWVMYTAFKAL--MPSVDYILVVDADTRL-DPDALYHLVKVFD---EDPQVGGACG--RILNKGGSWVVAYQNFEYAIS 497 (862)
T ss_pred HHHHHHHHHHHh--cCcceEEEEecCCCcc-CcHHHHHHHHHhc---cCcccceecc--ccccCCCceEEeHHHHHHHHH
Confidence 444555555553 3666799999999999 8999999999996 3347777776 333322111 11122222 12
Q ss_pred HHHHHHHhhcCCccccccc--eeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccccccccccccCCC
Q 012538 92 QVELAGIGSYDAALYCGTG--CFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLV 169 (461)
Q Consensus 92 ~~~~~g~~~~~~~~~~Gtg--~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~G~~ 169 (461)
+..++.-+..=|.+.|=.| ++||-+||.+-.. ++.. ++. +| |..-|..
T Consensus 498 h~l~Ka~ESvFG~VsclPGcfs~yR~~aL~~~~~--~~~y------------~~~-----------~~-----~~~~~~~ 547 (862)
T KOG2571|consen 498 HNLQKATESVFGCVSCLPGCFSLYRASALMDQFV--EYFY------------GEK-----------FS-----GPRHGIQ 547 (862)
T ss_pred HHHHHhhhhhceeEEecCchhHHHHHHHHhcchH--Hhhh------------chh-----------hc-----Ccccccc
Confidence 3556666666555555555 4699999965310 0000 000 00 0011233
Q ss_pred CCCccchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHHHHHHhhhhhcch
Q 012538 170 YGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEG 221 (461)
Q Consensus 170 ~~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G 221 (461)
+ +..||-.+..++..+||+.-||... ....++|+++.+++.||+||..|
T Consensus 548 ~-~~geDR~L~~~llskgy~l~Y~a~s--~a~t~~Pe~~~efl~QrrRW~~s 596 (862)
T KOG2571|consen 548 Y-SLGEDRWLCTLLLSKGYRLKYVAAS--DAETEAPESFLEFLNQRRRWLNS 596 (862)
T ss_pred c-ccchhHHHHHHHHhccceeeeeccc--cccccCcHhHHHHHHHhhhhccc
Confidence 3 4899999999999999999999864 45799999999999999999999
No 47
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=98.89 E-value=2.5e-09 Score=102.13 Aligned_cols=134 Identities=16% Similarity=0.106 Sum_probs=83.9
Q ss_pred CChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHH---HHhhcccCCCcEEEEecCcccccCCCcccchhHHH
Q 012538 12 NFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREAL---CFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYL 88 (461)
Q Consensus 12 ~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~---~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~ 88 (461)
.++++|+|.|++.+.. .++|+++.+|+|..+ +|++|.+++ ..+. .+++++.+ .|+................
T Consensus 58 ~G~~~a~N~g~~~a~~-~~~d~v~~lD~D~~~-~~~~l~~l~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 131 (237)
T cd02526 58 LGIAKALNIGIKAALE-NGADYVLLFDQDSVP-PPDMVEKLLAYKILSD---KNSNIGAV-GPRIIDRRTGENSPGVRKS 131 (237)
T ss_pred eehHHhhhHHHHHHHh-CCCCEEEEECCCCCc-CHhHHHHHHHHHHhhc---cCCCeEEE-eeeEEcCCCCeeccceecc
Confidence 4699999999997320 145999999999999 799999985 2222 23456655 4443322111110000000
Q ss_pred H-HHHHHHHHHhh-cCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhccccccccccccccc
Q 012538 89 V-VNQVELAGIGS-YDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEM 166 (461)
Q Consensus 89 ~-f~~~~~~g~~~-~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~ 166 (461)
. ........... .......|+|+++||+++..+ |
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~--------------------------------------------g 167 (237)
T cd02526 132 GYKLRIQKEGEEGLKEVDFLITSGSLISLEALEKV--------------------------------------------G 167 (237)
T ss_pred CccceecccccCCceEeeeeeccceEEcHHHHHHh--------------------------------------------C
Confidence 0 00000000111 122345688999999999753 7
Q ss_pred CCCCCCc--cchHHHHHHHHhcCCeEEEeCC
Q 012538 167 GLVYGCA--AEDVVTGLTIQCRGWKSMYFKP 195 (461)
Q Consensus 167 G~~~~~v--tED~~t~~~l~~~Gwrs~y~~~ 195 (461)
||+.... .||++.++|+..+||+..|++.
T Consensus 168 gfd~~~~~~~eD~d~~~r~~~~G~~~~~~~~ 198 (237)
T cd02526 168 GFDEDLFIDYVDTEWCLRARSKGYKIYVVPD 198 (237)
T ss_pred CCCHHHcCccchHHHHHHHHHcCCcEEEEcC
Confidence 8876543 5899999999999999999975
No 48
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=98.84 E-value=2.1e-08 Score=91.65 Aligned_cols=107 Identities=17% Similarity=0.091 Sum_probs=79.1
Q ss_pred CChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchhHHHHHH
Q 012538 12 NFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVN 91 (461)
Q Consensus 12 ~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~ 91 (461)
.+|++|+|.+++. +++|+|+++|+|.++ +|++|++++..+ ++ ..+ |..++...+.+...
T Consensus 65 ~~~~~~~n~g~~~----a~g~~i~~lD~D~~~-~~~~l~~~~~~~-~~----~~~-v~g~~~~~~~~~~~---------- 123 (182)
T cd06420 65 FRKAKIRNKAIAA----AKGDYLIFIDGDCIP-HPDFIADHIELA-EP----GVF-LSGSRVLLNEKLTE---------- 123 (182)
T ss_pred hhHHHHHHHHHHH----hcCCEEEEEcCCccc-CHHHHHHHHHHh-CC----CcE-Eecceeecccccce----------
Confidence 3689999999997 889999999999999 799999999887 43 344 44444333221110
Q ss_pred HHHHHHHhhcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccccccccccccCCCCC
Q 012538 92 QVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYG 171 (461)
Q Consensus 92 ~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~G~~~~ 171 (461)
..+.|+++.++|+.+... |||+..
T Consensus 124 ------------~~~~~~~~~~~r~~~~~~--------------------------------------------ggf~~~ 147 (182)
T cd06420 124 ------------RGIRGCNMSFWKKDLLAV--------------------------------------------NGFDEE 147 (182)
T ss_pred ------------eEeccceEEEEHHHHHHh--------------------------------------------CCCCcc
Confidence 235677788888888542 788765
Q ss_pred C---ccchHHHHHHHHhcCCeEEEeCC
Q 012538 172 C---AAEDVVTGLTIQCRGWKSMYFKP 195 (461)
Q Consensus 172 ~---vtED~~t~~~l~~~Gwrs~y~~~ 195 (461)
. -.||+++++|+..+|++..++.+
T Consensus 148 ~~~~~~eD~~l~~r~~~~g~~~~~~~~ 174 (182)
T cd06420 148 FTGWGGEDSELVARLLNSGIKFRKLKF 174 (182)
T ss_pred cccCCcchHHHHHHHHHcCCcEEEecc
Confidence 3 27999999999999977766654
No 49
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=98.82 E-value=2.2e-08 Score=99.99 Aligned_cols=132 Identities=14% Similarity=0.005 Sum_probs=85.5
Q ss_pred CCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCccc---------ccCCC--
Q 012538 11 HNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRF---------DNICK-- 79 (461)
Q Consensus 11 ~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f---------~n~~~-- 79 (461)
..+++.|.|.|++. +.||||+.+|+|+.+ +|++|++++..+.++ +.. .|. |... .+...
T Consensus 68 n~G~~~a~N~g~~~----A~gd~i~fLD~D~~~-~~~wL~~ll~~l~~~---~~~-~v~-p~~~~~~~~~~~~~~~~~~~ 137 (299)
T cd02510 68 REGLIRARIAGARA----ATGDVLVFLDSHCEV-NVGWLEPLLARIAEN---RKT-VVC-PIIDVIDADTFEYRGSSGDA 137 (299)
T ss_pred CCCHHHHHHHHHHH----ccCCEEEEEeCCccc-CccHHHHHHHHHHhC---CCe-EEE-eeeccccCCCeeEecCCCce
Confidence 46799999999998 889999999999999 799999999988643 122 222 3211 01000
Q ss_pred cccchhHHHH-HHHH----HHHHH--hhcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhc
Q 012538 80 NDLYANSYLV-VNQV----ELAGI--GSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLA 152 (461)
Q Consensus 80 ~d~~~~~~~~-f~~~----~~~g~--~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 152 (461)
...+.-.... +... ..... .....+..+|.+.++||+++..+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~v------------------------------- 186 (299)
T cd02510 138 RGGFDWSLHFKWLPLPEEERRRESPTAPIRSPTMAGGLFAIDREWFLEL------------------------------- 186 (299)
T ss_pred eEEecccceeccccCCHHHhhhcCCCCCccCccccceeeEEEHHHHHHh-------------------------------
Confidence 0000000000 0000 00000 11233456788889999999764
Q ss_pred ccccccccccccccCCCCCCc---cchHHHHHHHHhcCCeEEEeCCC
Q 012538 153 SCSYEKNTHWGKEMGLVYGCA---AEDVVTGLTIQCRGWKSMYFKPN 196 (461)
Q Consensus 153 ~c~ye~~t~wg~~~G~~~~~v---tED~~t~~~l~~~Gwrs~y~~~~ 196 (461)
|||+++-. .||+++++|+..+||+++|++..
T Consensus 187 -------------GgfDe~~~~~~~ED~Dl~~R~~~~G~~i~~~p~a 220 (299)
T cd02510 187 -------------GGYDEGMDIWGGENLELSFKVWQCGGSIEIVPCS 220 (299)
T ss_pred -------------CCCCCcccccCchhHHHHHHHHHcCCeEEEeecc
Confidence 88887643 49999999999999999999753
No 50
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=98.74 E-value=8.5e-08 Score=90.54 Aligned_cols=132 Identities=14% Similarity=0.014 Sum_probs=84.3
Q ss_pred CCCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchhHHHH
Q 012538 10 PHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLV 89 (461)
Q Consensus 10 ~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~ 89 (461)
.+.+|++|+|.|++. +.+|+|+++|+|..+ +|+++.+++..+.++ +.+.|.++.... .+....+......
T Consensus 62 ~n~G~~~a~n~g~~~----a~gd~i~~lD~D~~~-~~~~l~~l~~~~~~~----~~~~v~g~~~~~-~~~~~~~~~~~~~ 131 (224)
T cd06442 62 GKRGLGSAYIEGFKA----ARGDVIVVMDADLSH-PPEYIPELLEAQLEG----GADLVIGSRYVE-GGGVEGWGLKRKL 131 (224)
T ss_pred CCCChHHHHHHHHHH----cCCCEEEEEECCCCC-CHHHHHHHHHHHhcC----CCCEEEEeeeec-CCccCCCcHHHHH
Confidence 456899999999998 789999999999999 799999999987654 233444433221 1111111111111
Q ss_pred H---HHHHHHHHhhcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhccccccccccccccc
Q 012538 90 V---NQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEM 166 (461)
Q Consensus 90 f---~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~ 166 (461)
. ...........+.....|++.++||+++..+ +
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~i--------------------------------------------g 167 (224)
T cd06442 132 ISRGANLLARLLLGRKVSDPTSGFRAYRREVLEKL--------------------------------------------I 167 (224)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCccchhhHHHHHHH--------------------------------------------h
Confidence 1 1111111112233345666678999999753 1
Q ss_pred -CCCCCCccchHHHHHHHHhcCCeEEEeCC
Q 012538 167 -GLVYGCAAEDVVTGLTIQCRGWKSMYFKP 195 (461)
Q Consensus 167 -G~~~~~vtED~~t~~~l~~~Gwrs~y~~~ 195 (461)
++......+|.++.+++...||++.+.+.
T Consensus 168 ~~~~~~~~~~~~~l~~~~~~~g~~i~~~p~ 197 (224)
T cd06442 168 DSLVSKGYKFQLELLVRARRLGYRIVEVPI 197 (224)
T ss_pred hhccCCCcEEeHHHHHHHHHcCCeEEEeCe
Confidence 23334456788899999999999999864
No 51
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=98.68 E-value=1.8e-07 Score=90.49 Aligned_cols=131 Identities=8% Similarity=-0.048 Sum_probs=83.4
Q ss_pred CCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCccc--ch-hHH
Q 012538 11 HNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDL--YA-NSY 87 (461)
Q Consensus 11 ~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~--~~-~~~ 87 (461)
..+|++|+|.|++. +++|+++++|+|..+ +|++|.+++..+.++ +.+.|.... +.+...... +. ...
T Consensus 78 n~G~~~a~n~g~~~----a~g~~i~~lD~D~~~-~~~~l~~l~~~~~~~----~~~~v~g~r-~~~~~~~~~~~~~r~~~ 147 (243)
T PLN02726 78 KLGLGTAYIHGLKH----ASGDFVVIMDADLSH-HPKYLPSFIKKQRET----GADIVTGTR-YVKGGGVHGWDLRRKLT 147 (243)
T ss_pred CCCHHHHHHHHHHH----cCCCEEEEEcCCCCC-CHHHHHHHHHHHHhc----CCcEEEEcc-ccCCCCcCCccHHHHHH
Confidence 45799999999997 789999999999999 899999999888653 345555432 222111011 11 111
Q ss_pred HHHHHHHHHHHhhcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccccccccccccC
Q 012538 88 LVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMG 167 (461)
Q Consensus 88 ~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~G 167 (461)
...+........+.+..-.+|...++||+++..+ ++
T Consensus 148 ~~~~~~~~~~~~~~~~~d~~g~~~~~rr~~~~~i--------------------------------------------~~ 183 (243)
T PLN02726 148 SRGANVLAQTLLWPGVSDLTGSFRLYKRSALEDL--------------------------------------------VS 183 (243)
T ss_pred HHHHHHHHHHHhCCCCCcCCCcccceeHHHHHHH--------------------------------------------Hh
Confidence 1112222121222223334666678999999643 11
Q ss_pred -CCCCCccchHHHHHHHHhcCCeEEEeCC
Q 012538 168 -LVYGCAAEDVVTGLTIQCRGWKSMYFKP 195 (461)
Q Consensus 168 -~~~~~vtED~~t~~~l~~~Gwrs~y~~~ 195 (461)
...+...+|+++.+++..+||+++++|.
T Consensus 184 ~~~~~~~~~~~el~~~~~~~g~~i~~vp~ 212 (243)
T PLN02726 184 SVVSKGYVFQMEIIVRASRKGYRIEEVPI 212 (243)
T ss_pred hccCCCcEEehHHHHHHHHcCCcEEEeCc
Confidence 1122345689999999999999999874
No 52
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=98.65 E-value=5.7e-08 Score=96.03 Aligned_cols=135 Identities=17% Similarity=0.083 Sum_probs=86.9
Q ss_pred CCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchh--HHH
Q 012538 11 HNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYAN--SYL 88 (461)
Q Consensus 11 ~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~--~~~ 88 (461)
..+.|+|+|.|++.+- ..++|+|+.+|.|.++ +|+++.+++..+.++ +.+++.|. |..+ +.+.+..+.. ...
T Consensus 55 N~G~a~a~N~Gi~~a~-~~~~d~i~~lD~D~~~-~~~~l~~l~~~~~~~--~~~~~~~~-~~~~-~~~~~~~~~~~~~~~ 128 (281)
T TIGR01556 55 NQGIAGAQNQGLDASF-RRGVQGVLLLDQDSRP-GNAFLAAQWKLLSAE--NGQACALG-PRFF-DRGTSRRLPAIHLDG 128 (281)
T ss_pred CcchHHHHHHHHHHHH-HCCCCEEEEECCCCCC-CHHHHHHHHHHHHhc--CCceEEEC-CeEE-cCCCcccCCceeecc
Confidence 3589999999999731 1368999999999999 799999999888632 22677765 4332 2221111110 000
Q ss_pred HHHHHH-HHHHhh-cCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhccccccccccccccc
Q 012538 89 VVNQVE-LAGIGS-YDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEM 166 (461)
Q Consensus 89 ~f~~~~-~~g~~~-~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~ 166 (461)
...... ...... ....+..++|+++||+++..+ |
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~sg~li~~~~~~~i--------------------------------------------G 164 (281)
T TIGR01556 129 LLLRQISLDGLTTPQKTSFLISSGCLITREVYQRL--------------------------------------------G 164 (281)
T ss_pred cceeeecccccCCceeccEEEcCcceeeHHHHHHh--------------------------------------------C
Confidence 000000 000001 122345688899999999753 6
Q ss_pred CCCCC--CccchHHHHHHHHhcCCeEEEeCC
Q 012538 167 GLVYG--CAAEDVVTGLTIQCRGWKSMYFKP 195 (461)
Q Consensus 167 G~~~~--~vtED~~t~~~l~~~Gwrs~y~~~ 195 (461)
||+++ .=.||.|..+|+..+||++.++++
T Consensus 165 ~fde~~fi~~~D~e~~~R~~~~G~~i~~~~~ 195 (281)
T TIGR01556 165 MMDEELFIDHVDTEWSLRAQNYGIPLYIDPD 195 (281)
T ss_pred CccHhhcccchHHHHHHHHHHCCCEEEEeCC
Confidence 66654 225899999999999999999975
No 53
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=98.63 E-value=1.5e-07 Score=93.55 Aligned_cols=133 Identities=16% Similarity=0.144 Sum_probs=87.7
Q ss_pred ChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchhHH-----
Q 012538 13 FKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSY----- 87 (461)
Q Consensus 13 ~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~----- 87 (461)
.+|.|.|.|++. +++|+|+++|+|+++ .|+++.+++.+..+-.. ..-+++-.|..+.+.+....+.+..
T Consensus 75 ~~a~arN~g~~~----A~~d~l~flD~D~i~-~~~~i~~~~~~~~~l~~-~~~~~~~~p~~yl~~~~~~~~~~~~~~~~~ 148 (281)
T PF10111_consen 75 SRAKARNIGAKY----ARGDYLIFLDADCIP-SPDFIEKLLNHVKKLDK-NPNAFLVYPCLYLSEEGSEKFYSQFKNLWD 148 (281)
T ss_pred CHHHHHHHHHHH----cCCCEEEEEcCCeee-CHHHHHHHHHHHHHHhc-CCCceEEEeeeeccchhhHHHhhcchhcch
Confidence 799999999998 899999999999999 79999999983211101 1234555566655443222221111
Q ss_pred HHHH-HHHHHHHhhcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhccccccccccccccc
Q 012538 88 LVVN-QVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEM 166 (461)
Q Consensus 88 ~~f~-~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~ 166 (461)
..+. +......+.++.....|++.+++|+....+ |
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~s~~~~i~r~~f~~i--------------------------------------------G 184 (281)
T PF10111_consen 149 HEFLESFISGKNSLWEFIAFASSCFLINREDFLEI--------------------------------------------G 184 (281)
T ss_pred HHHHHHHhhccccccccccccceEEEEEHHHHHHh--------------------------------------------C
Confidence 0111 111111222333334668888999998754 8
Q ss_pred CCCCCC---ccchHHHHHHHHhcCCeEEEeCC
Q 012538 167 GLVYGC---AAEDVVTGLTIQCRGWKSMYFKP 195 (461)
Q Consensus 167 G~~~~~---vtED~~t~~~l~~~Gwrs~y~~~ 195 (461)
||+++- =.||.|.+.||...|.+..+++.
T Consensus 185 GfDE~f~G~G~ED~D~~~RL~~~~~~~~~~~~ 216 (281)
T PF10111_consen 185 GFDERFRGWGYEDIDFGYRLKKAGYKFKRSPD 216 (281)
T ss_pred CCCccccCCCcchHHHHHHHHHcCCcEecChH
Confidence 888653 37999999999999999887764
No 54
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.61 E-value=1.4e-07 Score=87.98 Aligned_cols=133 Identities=14% Similarity=0.069 Sum_probs=88.7
Q ss_pred CCCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchhHHHH
Q 012538 10 PHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLV 89 (461)
Q Consensus 10 ~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~ 89 (461)
..+++++|+|.+++. +++|||+++|+|.+. +|+.|.+++..+.. +++.+++.+.....+.+... .......
T Consensus 63 ~~~G~~~~~n~g~~~----~~g~~v~~ld~Dd~~-~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 133 (214)
T cd04196 63 KNLGVARNFESLLQA----ADGDYVFFCDQDDIW-LPDKLERLLKAFLK---DDKPLLVYSDLELVDENGNP-IGESFFE 133 (214)
T ss_pred CCccHHHHHHHHHHh----CCCCEEEEECCCccc-ChhHHHHHHHHHhc---CCCceEEecCcEEECCCCCC-ccccccc
Confidence 456899999999997 889999999999999 89999999988542 23567777765544332211 0000000
Q ss_pred HHHH--HHHHHhhcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccccccccccccC
Q 012538 90 VNQV--ELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMG 167 (461)
Q Consensus 90 f~~~--~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~G 167 (461)
.... ............+.|+++++||+++..+ ++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--------------------------------------------~~ 169 (214)
T cd04196 134 YQKIKPGTSFNNLLFQNVVTGCTMAFNRELLELA--------------------------------------------LP 169 (214)
T ss_pred ccccCCccCHHHHHHhCccCCceeeEEHHHHHhh--------------------------------------------cc
Confidence 0000 0001111223356789999999999753 56
Q ss_pred CCCC-CccchHHHHHHHHhcCCeEEEeCCC
Q 012538 168 LVYG-CAAEDVVTGLTIQCRGWKSMYFKPN 196 (461)
Q Consensus 168 ~~~~-~vtED~~t~~~l~~~Gwrs~y~~~~ 196 (461)
++.. ...||.++..++.. |.+..|+++.
T Consensus 170 ~~~~~~~~~D~~~~~~~~~-~~~~~~~~~~ 198 (214)
T cd04196 170 FPDADVIMHDWWLALLASA-FGKVVFLDEP 198 (214)
T ss_pred ccccccccchHHHHHHHHH-cCceEEcchh
Confidence 6665 68899999998877 6688888753
No 55
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=98.60 E-value=6.5e-07 Score=84.83 Aligned_cols=132 Identities=17% Similarity=0.019 Sum_probs=81.9
Q ss_pred CChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchhHHHHH-
Q 012538 12 NFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVV- 90 (461)
Q Consensus 12 ~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f- 90 (461)
.+.+.|+|.|++. ++||+++.+|+|..+ +|+.+.+.+..+.+. +. ++|-.+......+....+.......
T Consensus 70 ~G~~~a~N~g~~~----a~gd~i~~lD~D~~~-~~~~l~~~~~~~~~~---~~-~~v~~~~~~~~~~~~~~~~~~~~~~~ 140 (219)
T cd06913 70 KGVGYAKNQAIAQ----SSGRYLCFLDSDDVM-MPQRIRLQYEAALQH---PN-SIIGCQVRRIPEDSTERYTRWINTLT 140 (219)
T ss_pred ccHHHHHHHHHHh----cCCCEEEEECCCccC-ChhHHHHHHHHHHhC---CC-cEEEEEEEecCcccchhhHHHHHhcC
Confidence 5789999999997 889999999999999 799999988777542 11 2232211111111111111100000
Q ss_pred HHHHHHHHhhcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccccccccccccCCCC
Q 012538 91 NQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVY 170 (461)
Q Consensus 91 ~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~G~~~ 170 (461)
............++.....+.++||+++..+ |||+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~--------------------------------------------g~f~~ 176 (219)
T cd06913 141 REQLLTQVYTSHGPTVIMPTWFCSREWFSHV--------------------------------------------GPFDE 176 (219)
T ss_pred HHHHHHHHHhhcCCccccccceeehhHHhhc--------------------------------------------CCccc
Confidence 0001111111233333344568999999753 77875
Q ss_pred C--CccchHHHHHHHHhcCCeEEEeCCC
Q 012538 171 G--CAAEDVVTGLTIQCRGWKSMYFKPN 196 (461)
Q Consensus 171 ~--~vtED~~t~~~l~~~Gwrs~y~~~~ 196 (461)
. ...||+++.+|+..+|+++.|+++.
T Consensus 177 ~~~~~~eD~~l~~r~~~~g~~i~~~~~~ 204 (219)
T cd06913 177 GGKGVPEDLLFFYEHLRKGGGVYRVDRC 204 (219)
T ss_pred hhccchhHHHHHHHHHHcCCceEEEcce
Confidence 4 3569999999999999999999864
No 56
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.59 E-value=2.6e-07 Score=86.17 Aligned_cols=105 Identities=18% Similarity=0.076 Sum_probs=78.9
Q ss_pred CChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchhHHHHHH
Q 012538 12 NFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVN 91 (461)
Q Consensus 12 ~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~ 91 (461)
.+++.++|.+++.+- ..++|+++++|+|.++ +|+++++++..+.++ +++.+. |..+.. +.
T Consensus 62 ~g~~~~~n~~~~~a~-~~~~d~v~~ld~D~~~-~~~~l~~l~~~~~~~----~~~~~~-~~~~~~-~~------------ 121 (202)
T cd04185 62 LGGAGGFYEGVRRAY-ELGYDWIWLMDDDAIP-DPDALEKLLAYADKD----NPQFLA-PLVLDP-DG------------ 121 (202)
T ss_pred cchhhHHHHHHHHHh-ccCCCEEEEeCCCCCc-ChHHHHHHHHHHhcC----CceEec-ceeEcC-CC------------
Confidence 468889999998643 3579999999999999 799999999988754 456553 332221 10
Q ss_pred HHHHHHHhhcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccccccccccccCCCCC
Q 012538 92 QVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYG 171 (461)
Q Consensus 92 ~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~G~~~~ 171 (461)
+++|.++||+++... +|++..
T Consensus 122 ---------------~~~~~~~~~~~~~~~--------------------------------------------g~~~~~ 142 (202)
T cd04185 122 ---------------SFVGVLISRRVVEKI--------------------------------------------GLPDKE 142 (202)
T ss_pred ---------------ceEEEEEeHHHHHHh--------------------------------------------CCCChh
Confidence 456789999999653 444432
Q ss_pred --CccchHHHHHHHHhcCCeEEEeCCC
Q 012538 172 --CAAEDVVTGLTIQCRGWKSMYFKPN 196 (461)
Q Consensus 172 --~vtED~~t~~~l~~~Gwrs~y~~~~ 196 (461)
...||.+.+.++..+|++. |++..
T Consensus 143 ~~~~~eD~~~~~r~~~~G~~i-~~~~~ 168 (202)
T cd04185 143 FFIWGDDTEYTLRASKAGPGI-YVPDA 168 (202)
T ss_pred hhccchHHHHHHHHHHcCCcE-Eecce
Confidence 4569999999999999999 88764
No 57
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=98.53 E-value=5.2e-08 Score=86.35 Aligned_cols=103 Identities=23% Similarity=0.293 Sum_probs=64.3
Q ss_pred CCCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchhHHHH
Q 012538 10 PHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLV 89 (461)
Q Consensus 10 ~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~ 89 (461)
+..+|+.|+|.+++. +++|+|+++|+|..+ +|+++++++..+.. +++++.|.......+...+ ........
T Consensus 62 ~~~g~~~~~n~~~~~----~~~~~i~~~D~D~~~-~~~~l~~~~~~~~~---~~~~~~v~~~~~~~~~~~~-~~~~~~~~ 132 (180)
T cd06423 62 ENGGKAGALNAGLRH----AKGDIVVVLDADTIL-EPDALKRLVVPFFA---DPKVGAVQGRVRVRNGSEN-LLTRLQAI 132 (180)
T ss_pred ccCCchHHHHHHHHh----cCCCEEEEECCCCCc-ChHHHHHHHHHhcc---CCCeeeEeeeEEEecCcCc-ceeccchh
Confidence 456899999999998 789999999999999 79999999555542 2367777655443332211 11110000
Q ss_pred -H---HHHHHHHHhhcCC-ccccccceeEechhhcCC
Q 012538 90 -V---NQVELAGIGSYDA-ALYCGTGCFHRRESLSGA 121 (461)
Q Consensus 90 -f---~~~~~~g~~~~~~-~~~~Gtg~~~RR~aL~~~ 121 (461)
+ ......+...... ..+.|++.++||+++...
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 169 (180)
T cd06423 133 EYLSIFRLGRRAQSALGGVLVLSGAFGAFRREALREV 169 (180)
T ss_pred eecceeeeeeehhheecceeecCchHHHHHHHHHHHh
Confidence 0 0111111111222 456899999999999753
No 58
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=98.39 E-value=2.3e-06 Score=80.55 Aligned_cols=43 Identities=23% Similarity=0.181 Sum_probs=38.7
Q ss_pred CChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcc
Q 012538 12 NFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDE 59 (461)
Q Consensus 12 ~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~ 59 (461)
.+|++|+|.|++. +.+|+|+.+|+|... +|+.+.+++..+.++
T Consensus 68 ~G~~~a~~~g~~~----a~gd~i~~ld~D~~~-~~~~l~~l~~~~~~~ 110 (211)
T cd04188 68 RGKGGAVRAGMLA----ARGDYILFADADLAT-PFEELEKLEEALKTS 110 (211)
T ss_pred CCcHHHHHHHHHH----hcCCEEEEEeCCCCC-CHHHHHHHHHHHhcc
Confidence 4799999999997 789999999999999 799999999886543
No 59
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=98.21 E-value=4.1e-06 Score=72.23 Aligned_cols=94 Identities=27% Similarity=0.179 Sum_probs=72.0
Q ss_pred CCCCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchhHHH
Q 012538 9 CPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYL 88 (461)
Q Consensus 9 ~~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~ 88 (461)
..+.+|++++|.+++. .++|+++++|+|.++ +|+++...+..+.. +++.+.|+++
T Consensus 60 ~~~~g~~~~~~~~~~~----~~~d~v~~~d~D~~~-~~~~~~~~~~~~~~---~~~~~~v~~~----------------- 114 (156)
T cd00761 60 EENQGLAAARNAGLKA----ARGEYILFLDADDLL-LPDWLERLVAELLA---DPEADAVGGP----------------- 114 (156)
T ss_pred cCCCChHHHHHHHHHH----hcCCEEEEECCCCcc-CccHHHHHHHHHhc---CCCceEEecc-----------------
Confidence 3467899999999997 689999999999999 79999987544432 2356777665
Q ss_pred HHHHHHHHHHhhcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccccccccccccCC
Q 012538 89 VVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGL 168 (461)
Q Consensus 89 ~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~G~ 168 (461)
++.++|++++... +|+
T Consensus 115 --------------------~~~~~~~~~~~~~--------------------------------------------~~~ 130 (156)
T cd00761 115 --------------------GNLLFRRELLEEI--------------------------------------------GGF 130 (156)
T ss_pred --------------------chheeeHHHHHHh--------------------------------------------CCc
Confidence 6778999998643 333
Q ss_pred CCCCc--cchHHHHHHHHhcCCeEE
Q 012538 169 VYGCA--AEDVVTGLTIQCRGWKSM 191 (461)
Q Consensus 169 ~~~~v--tED~~t~~~l~~~Gwrs~ 191 (461)
+.... .||.++..+++..|+++.
T Consensus 131 ~~~~~~~~ed~~~~~~~~~~g~~~~ 155 (156)
T cd00761 131 DEALLSGEEDDDFLLRLLRGGKVAF 155 (156)
T ss_pred chHhcCCcchHHHHHHHHhhccccc
Confidence 33222 699999999999998764
No 60
>PRK10063 putative glycosyl transferase; Provisional
Probab=98.15 E-value=2e-05 Score=76.97 Aligned_cols=125 Identities=14% Similarity=0.030 Sum_probs=76.7
Q ss_pred CCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchhHHHHH
Q 012538 11 HNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVV 90 (461)
Q Consensus 11 ~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f 90 (461)
.+++++|+|.|++. +.||+|+.+|+|... +|+.++........+ +...++ .... ............. .
T Consensus 67 ~~G~~~A~N~Gi~~----a~g~~v~~ld~DD~~-~~~~~~~~~~~~~~~---~~~~v~-g~~~-~~~~~~~~~~~~~--~ 134 (248)
T PRK10063 67 DNGIYDAMNKGIAM----AQGRFALFLNSGDIF-HQDAANFVRQLKMQK---DNAMII-GDAL-LDFGDGHKIKRSA--K 134 (248)
T ss_pred CCCHHHHHHHHHHH----cCCCEEEEEeCCccc-CcCHHHHHHHHHhCC---CCeEEE-eeeE-EEcCCCcEEEEcc--C
Confidence 35899999999997 889999999999999 788765433332221 233333 2221 1111111110000 0
Q ss_pred HHHHHHHHhhcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccccccccccccCCCC
Q 012538 91 NQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVY 170 (461)
Q Consensus 91 ~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~G~~~ 170 (461)
+..........++.+.++||+.+.. +||+.
T Consensus 135 -----~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------~~fd~ 164 (248)
T PRK10063 135 -----PGWYIYHSLPASHQAIFFPVSGLKK---------------------------------------------WRYDL 164 (248)
T ss_pred -----ChhHHhcCCCCCCcEEEEEHHHHhc---------------------------------------------CCCCc
Confidence 0000011223466778899988753 56665
Q ss_pred C-CccchHHHHHHHHhcCCeEEEeCCCC
Q 012538 171 G-CAAEDVVTGLTIQCRGWKSMYFKPNK 197 (461)
Q Consensus 171 ~-~vtED~~t~~~l~~~Gwrs~y~~~~~ 197 (461)
. ...||+++.+|+..+|++..+++...
T Consensus 165 ~~~~~~Dydl~lrl~~~g~~~~~v~~~l 192 (248)
T PRK10063 165 QYKVSSDYALAARLYKAGYAFKKLNGLV 192 (248)
T ss_pred ccchHHhHHHHHHHHHcCCcEEEcCcee
Confidence 4 46799999999999999999998653
No 61
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=98.09 E-value=5.5e-06 Score=83.26 Aligned_cols=135 Identities=20% Similarity=0.119 Sum_probs=87.0
Q ss_pred CCChHHHHHHHHHhccccCCCC-EEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCc-ccchhHHH
Q 012538 11 HNFKAGAMNALIRVSSVISNGP-VILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKN-DLYANSYL 88 (461)
Q Consensus 11 ~~~KAGaLN~~l~~~~~~s~~~-~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~-d~~~~~~~ 88 (461)
..|=||+-|.+.+... .+++ ++++++-|+++ +|++|.+++..+.+ .+..+.|+.....++.... +..+....
T Consensus 66 NlG~agg~n~g~~~a~--~~~~~~~l~LN~D~~~-~~~~l~~ll~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 139 (305)
T COG1216 66 NLGFAGGFNRGIKYAL--AKGDDYVLLLNPDTVV-EPDLLEELLKAAEE---DPAAGVVGPLIRNYDESLYIDRRGGESD 139 (305)
T ss_pred CccchhhhhHHHHHHh--cCCCcEEEEEcCCeee-ChhHHHHHHHHHHh---CCCCeEeeeeEecCCCCcchheeccccc
Confidence 3456889999998842 4444 89999999999 89999999988863 3366766654443331110 00000000
Q ss_pred ---------HHHHHHH--HHHhhcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccc
Q 012538 89 ---------VVNQVEL--AGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYE 157 (461)
Q Consensus 89 ---------~f~~~~~--~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye 157 (461)
..++... ...+... +.++|+++++||+++..+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~~~li~~~~~~~v------------------------------------ 182 (305)
T COG1216 140 GLTGGWRASPLLEIAPDLSSYLEVV-ASLSGACLLIRREAFEKV------------------------------------ 182 (305)
T ss_pred cccccceecccccccccccchhhhh-hhcceeeeEEcHHHHHHh------------------------------------
Confidence 0000000 0000000 047899999999999753
Q ss_pred cccccccccCCCCC--CccchHHHHHHHHhcCCeEEEeCCC
Q 012538 158 KNTHWGKEMGLVYG--CAAEDVVTGLTIQCRGWKSMYFKPN 196 (461)
Q Consensus 158 ~~t~wg~~~G~~~~--~vtED~~t~~~l~~~Gwrs~y~~~~ 196 (461)
|||+.+ .-.||+|.++|+...||++.|++..
T Consensus 183 --------G~~de~~F~y~eD~D~~~R~~~~G~~i~~~p~a 215 (305)
T COG1216 183 --------GGFDERFFIYYEDVDLCLRARKAGYKIYYVPDA 215 (305)
T ss_pred --------CCCCcccceeehHHHHHHHHHHcCCeEEEeecc
Confidence 667754 5689999999999999999999753
No 62
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=98.07 E-value=7.2e-06 Score=74.81 Aligned_cols=100 Identities=16% Similarity=0.059 Sum_probs=62.0
Q ss_pred CChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCC-cccchhHHHHH
Q 012538 12 NFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICK-NDLYANSYLVV 90 (461)
Q Consensus 12 ~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~-~d~~~~~~~~f 90 (461)
.+|++|+|.+++. +.+|+++++|+|..+ +|++|++++..+.++ +.++|+.+....+... ...+.......
T Consensus 65 ~G~~~a~n~g~~~----a~gd~i~~lD~D~~~-~~~~l~~l~~~~~~~----~~~~v~g~~~~~~~~~~~~~~~~~~~~~ 135 (185)
T cd04179 65 FGKGAAVRAGFKA----ARGDIVVTMDADLQH-PPEDIPKLLEKLLEG----GADVVIGSRFVRGGGAGMPLLRRLGSRL 135 (185)
T ss_pred CCccHHHHHHHHH----hcCCEEEEEeCCCCC-CHHHHHHHHHHHhcc----CCcEEEEEeecCCCcccchHHHHHHHHH
Confidence 4699999999998 789999999999999 799999999886543 3455666654443211 01111111111
Q ss_pred HHHHHHHHhhcCCccccccceeEechhhcC
Q 012538 91 NQVELAGIGSYDAALYCGTGCFHRRESLSG 120 (461)
Q Consensus 91 ~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~ 120 (461)
+................|...++||+++..
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 165 (185)
T cd04179 136 FNFLIRLLLGVRISDTQSGFRLFRREVLEA 165 (185)
T ss_pred HHHHHHHHcCCCCcCCCCceeeeHHHHHHH
Confidence 111111112222233456667899999965
No 63
>PRK10073 putative glycosyl transferase; Provisional
Probab=98.05 E-value=1.6e-05 Score=81.01 Aligned_cols=162 Identities=10% Similarity=0.003 Sum_probs=93.9
Q ss_pred CCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCC-C------cccc
Q 012538 11 HNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNIC-K------NDLY 83 (461)
Q Consensus 11 ~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~-~------~d~~ 83 (461)
.++.++|.|.|++. ++||||+.+|+|..+ +|+.+++++..+.++ +.+++... +..+++.. . .+..
T Consensus 70 n~G~~~arN~gl~~----a~g~yi~flD~DD~~-~p~~l~~l~~~~~~~--~~dvv~~~-~~~~~~~~~~~~~~~~~~~~ 141 (328)
T PRK10073 70 NAGVSVARNTGLAV----ATGKYVAFPDADDVV-YPTMYETLMTMALED--DLDVAQCN-ADWCFRDTGETWQSIPSDRL 141 (328)
T ss_pred CCChHHHHHHHHHh----CCCCEEEEECCCCcc-ChhHHHHHHHHHHhC--CCCEEEEc-cEEEEeCCCccccccccccc
Confidence 56899999999997 899999999999999 799999999887643 23444322 11121110 0 0100
Q ss_pred hhHHHHH--HHHHHHHHhhcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccccccc
Q 012538 84 ANSYLVV--NQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTH 161 (461)
Q Consensus 84 ~~~~~~f--~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~ 161 (461)
... .++ .+.+......... .....+.++||+.+...
T Consensus 142 ~~~-~~~~~~~~l~~~l~~~~~-~~~~~~~l~Rr~~l~~~---------------------------------------- 179 (328)
T PRK10073 142 RST-GVLSGPDWLRMALSSRRW-THVVWLGVYRRDFIVKN---------------------------------------- 179 (328)
T ss_pred ccc-ceechHHHHHHHHhhCCC-CccHhHHHHHHHHHHHc----------------------------------------
Confidence 000 000 0011111111111 11223458999998642
Q ss_pred cccccCCCCCCccchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHHHH---HHhhhhhcchhHHHH
Q 012538 162 WGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIA---LVQMKRWSEGMFQIF 226 (461)
Q Consensus 162 wg~~~G~~~~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~---~~Qr~RWa~G~lqi~ 226 (461)
...|+.+...||+...+++..++.++.|+++. ...+-.-+.+...- -+++.++....+++.
T Consensus 180 ---~~~f~~~~~~eD~~~~~~~~~~~~~v~~~~~~-ly~Yr~~~~Sis~~~~~~~~~~~~~~~~~~i~ 243 (328)
T PRK10073 180 ---NIKFEPGLHHQDIPWTTEVMFNALRVRYTEQS-LYKYYLHDTSVSRLPRQGNKNLNYQRHYIKIT 243 (328)
T ss_pred ---CCccCCCCEeccHHHHHHHHHHCCEEEEECCC-EEEEEecCCcccCCCCcchHHHHHHHHHHHHH
Confidence 12366666679999999999999999999864 23333334433321 133445555555553
No 64
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=97.94 E-value=3.4e-06 Score=74.49 Aligned_cols=102 Identities=18% Similarity=0.101 Sum_probs=63.7
Q ss_pred CChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchh--HHHH
Q 012538 12 NFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYAN--SYLV 89 (461)
Q Consensus 12 ~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~--~~~~ 89 (461)
.++++|+|.|++. +.+||++++|+|.++ .|+++.+++..+.++ ++++.....+....+......... ....
T Consensus 64 ~g~~~~~n~~~~~----a~~~~i~~ld~D~~~-~~~~l~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (169)
T PF00535_consen 64 LGFSAARNRGIKH----AKGEYILFLDDDDII-SPDWLEELVEALEKN--PPDVVIGSVIYIDDDNRYPDRRLRFSFWNR 136 (169)
T ss_dssp SHHHHHHHHHHHH------SSEEEEEETTEEE--TTHHHHHHHHHHHC--TTEEEEEEEEEEECTTETEECCCTSEEEEC
T ss_pred ccccccccccccc----cceeEEEEeCCCceE-cHHHHHHHHHHHHhC--CCcEEEEEEEEecCCccccccccchhhhhh
Confidence 3899999999998 889999999999999 799999999999863 223433332222222111110000 0011
Q ss_pred HHHHHHHHHhhcCCccccccceeEechhhcC
Q 012538 90 VNQVELAGIGSYDAALYCGTGCFHRRESLSG 120 (461)
Q Consensus 90 f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~ 120 (461)
.+..............++|+++++||++++.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~ 167 (169)
T PF00535_consen 137 FERKIFNNIRFWKISFFIGSCALFRRSVFEE 167 (169)
T ss_dssp CHCHHHHTTHSTTSSEESSSCEEEEEHHHHH
T ss_pred hhhHHHHhhhcCCcccccccEEEEEHHHHHh
Confidence 1222333344556678899999999999863
No 65
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=97.90 E-value=3.6e-05 Score=70.41 Aligned_cols=97 Identities=12% Similarity=0.107 Sum_probs=59.7
Q ss_pred CCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchhH-HHH
Q 012538 11 HNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANS-YLV 89 (461)
Q Consensus 11 ~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~-~~~ 89 (461)
..+|++|+|.+++. +.+|+|+.+|+|..+ +|++|.+++..+. + +.++.... ....+ . ...... ...
T Consensus 65 n~G~~~a~n~g~~~----a~~d~i~~~D~D~~~-~~~~l~~l~~~~~-~--~~~~v~g~--~~~~~-~--~~~~~~~~~~ 131 (181)
T cd04187 65 NFGQQAALLAGLDH----ARGDAVITMDADLQD-PPELIPEMLAKWE-E--GYDVVYGV--RKNRK-E--SWLKRLTSKL 131 (181)
T ss_pred CCCcHHHHHHHHHh----cCCCEEEEEeCCCCC-CHHHHHHHHHHHh-C--CCcEEEEE--ecCCc-c--hHHHHHHHHH
Confidence 45799999999997 789999999999999 7999999998753 2 22343322 11111 1 111111 111
Q ss_pred HHHHHHHHHhhcCCccccccceeEechhhcCC
Q 012538 90 VNQVELAGIGSYDAALYCGTGCFHRRESLSGA 121 (461)
Q Consensus 90 f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~ 121 (461)
++. ......+..-+...|+..++||+++..+
T Consensus 132 ~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~~i 162 (181)
T cd04187 132 FYR-LINKLSGVDIPDNGGDFRLMDRKVVDAL 162 (181)
T ss_pred HHH-HHHHHcCCCCCCCCCCEEEEcHHHHHHH
Confidence 221 1122222333445677789999999753
No 66
>PRK10018 putative glycosyl transferase; Provisional
Probab=97.79 E-value=0.00017 Score=71.84 Aligned_cols=44 Identities=16% Similarity=0.073 Sum_probs=39.2
Q ss_pred CCCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhc
Q 012538 10 PHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLD 58 (461)
Q Consensus 10 ~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d 58 (461)
...+++.|+|.|++. ++||||+.+|+|... .|+.|.+.+.++.+
T Consensus 69 ~n~G~~~a~N~gi~~----a~g~~I~~lDaDD~~-~p~~l~~~~~~~~~ 112 (279)
T PRK10018 69 INSGACAVRNQAIML----AQGEYITGIDDDDEW-TPNRLSVFLAHKQQ 112 (279)
T ss_pred CCCCHHHHHHHHHHH----cCCCEEEEECCCCCC-CccHHHHHHHHHHh
Confidence 356899999999997 899999999999999 79999999988753
No 67
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=97.41 E-value=0.0015 Score=66.80 Aligned_cols=54 Identities=24% Similarity=0.238 Sum_probs=42.7
Q ss_pred CCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEec
Q 012538 11 HNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQH 70 (461)
Q Consensus 11 ~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~ 70 (461)
..+|++|+|.|++. +.||+|+++|+|... +|+.+.+++..+.+-+ ++..+.|..
T Consensus 147 N~G~~~A~~~Gi~~----a~gd~I~~~DaD~~~-~~~~l~~l~~~l~~~~-~~~~dvV~G 200 (333)
T PTZ00260 147 NKGKGGAVRIGMLA----SRGKYILMVDADGAT-DIDDFDKLEDIMLKIE-QNGLGIVFG 200 (333)
T ss_pred CCChHHHHHHHHHH----ccCCEEEEEeCCCCC-CHHHHHHHHHHHHHhh-ccCCceEEe
Confidence 35899999999997 789999999999999 8999999988876410 123455554
No 68
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=97.27 E-value=0.0001 Score=74.43 Aligned_cols=150 Identities=24% Similarity=0.255 Sum_probs=103.0
Q ss_pred CChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEE-ecCcccccCCCcccchhHHHHH
Q 012538 12 NFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFV-QHPQRFDNICKNDLYANSYLVV 90 (461)
Q Consensus 12 ~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~V-Q~pq~f~n~~~~d~~~~~~~~f 90 (461)
+-|-.|+=-|.|. ...|+|++.|.|-.. .||.+.++..-|+.++ ++|+| |+|--+. ....| ..-++ ++
T Consensus 156 npKInN~mpgy~~----a~ydlvlisDsgI~m-~pdtildm~t~M~she---kmalvtq~py~~d-r~Gf~-atle~-~~ 224 (431)
T KOG2547|consen 156 NPKINNMMPGYRA----AKYDLVLISDSGIFM-KPDTILDMATTMMSHE---KMALVTQTPYCKD-RQGFD-ATLEQ-VY 224 (431)
T ss_pred ChhhhccCHHHHH----hcCCEEEEecCCeee-cCchHHHHHHhhhccc---ceeeecCCceeec-cccch-hhhhh-ee
Confidence 4577777778887 889999999999999 8999999999998654 89998 6664332 22211 11111 23
Q ss_pred HHHHHHHHhhc-----CCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccccccccccc
Q 012538 91 NQVELAGIGSY-----DAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKE 165 (461)
Q Consensus 91 ~~~~~~g~~~~-----~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~ 165 (461)
|...+ .+-.+ +--+.+|-.|+.|+++|++.
T Consensus 225 fgTsh-~r~yl~~n~~~~~c~tgms~~mrK~~ld~~-------------------------------------------- 259 (431)
T KOG2547|consen 225 FGTSH-PRIYLSGNVLGFNCSTGMSSMMRKEALDEC-------------------------------------------- 259 (431)
T ss_pred eccCC-ceEEEccccccccccccHHHHHHHHHHHHh--------------------------------------------
Confidence 32211 11112 22234677789999999642
Q ss_pred cCCC--CCCccchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHHHHHHhhhhhc
Q 012538 166 MGLV--YGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWS 219 (461)
Q Consensus 166 ~G~~--~~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa 219 (461)
||.. .+.+.||+-.+-.+..+||++.+...+ +--..+-.+...+..|-.||.
T Consensus 260 ggi~~f~~yLaedyFaaksllSRG~ksaist~p--alQnSas~~mssf~~Ri~rwv 313 (431)
T KOG2547|consen 260 GGISAFGGYLAEDYFAAKSLLSRGWKSAISTHP--ALQNSASVTMSSFLDRIIRWV 313 (431)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhhhhhhhcccc--hhhhhhhhHHHHHHHHHHHhh
Confidence 4432 247899999999999999999998753 333556677888888888886
No 69
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=97.17 E-value=0.0037 Score=63.14 Aligned_cols=51 Identities=22% Similarity=0.256 Sum_probs=43.5
Q ss_pred CCChHHHHHHHHHhccccCCCCEEEEeCCCCC-cCchHHHHHHHHHhh-cccCCCcEEEEec
Q 012538 11 HNFKAGAMNALIRVSSVISNGPVILNLDCDMY-ANDGDAIREALCFLL-DEKREHEIAFVQH 70 (461)
Q Consensus 11 ~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~-~~~p~~l~~~~~~f~-d~~~~~~va~VQ~ 70 (461)
..+|++|+|.+++. +++|+|+.+|||.. + +|+++.+++..+. || ++++|..
T Consensus 100 n~Gkg~A~~~g~~~----a~gd~vv~lDaD~~~~-~p~~l~~l~~~l~~~~----~~~~V~g 152 (306)
T PRK13915 100 RPGKGEALWRSLAA----TTGDIVVFVDADLINF-DPMFVPGLLGPLLTDP----GVHLVKA 152 (306)
T ss_pred CCCHHHHHHHHHHh----cCCCEEEEEeCccccC-CHHHHHHHHHHHHhCC----CceEEEE
Confidence 45899999999997 88999999999997 7 7999999998886 55 5677754
No 70
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=96.42 E-value=0.098 Score=58.65 Aligned_cols=194 Identities=17% Similarity=0.139 Sum_probs=112.6
Q ss_pred ccCCCCCCC--CChHHHHHHHHHhccccCCCCEEEEeCC--CCCcCchHHHHHHHHHhhccc--------------CCCc
Q 012538 3 REKRPGCPH--NFKAGAMNALIRVSSVISNGPVILNLDC--DMYANDGDAIREALCFLLDEK--------------REHE 64 (461)
Q Consensus 3 Rekrp~~~~--~~KAGaLN~~l~~~~~~s~~~~il~lDa--D~~~~~p~~l~~~~~~f~d~~--------------~~~~ 64 (461)
|-|-||.+. .+|..|-|+|+=. +.||++=.+|+ |.+.-+-==+|.++.-|.+.. ..+.
T Consensus 263 ri~LpG~pilGeGK~eNQNhaiiF----~rGe~lQ~IDmNQDnYleE~lK~rnlL~Ef~~~~~~~~~~~~~~~~~~~~~~ 338 (817)
T PF02364_consen 263 RIKLPGNPILGEGKPENQNHAIIF----TRGEYLQTIDMNQDNYLEEALKMRNLLEEFEEMHGDSSSPYIPGIEEEGKRP 338 (817)
T ss_pred EEECCCCCcCCCCCccccceeEEE----EccccccccccchhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCCccccCCCC
Confidence 446676554 5699999999987 99999999998 666522112334444554321 1346
Q ss_pred EEEEecCcccccCCCc---ccchhHHHHHHHHHHHHHhhcCCccccccceeEechhhcCCCCCccccccccccCCCCcCh
Q 012538 65 IAFVQHPQRFDNICKN---DLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSV 141 (461)
Q Consensus 65 va~VQ~pq~f~n~~~~---d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~ 141 (461)
++.|-++.+....+-. |..+.+...|--..|+-+...++-+.-|.==++.|--...
T Consensus 339 ~aIlG~RE~IFs~~vg~L~~~aa~qE~~F~Tl~qR~la~p~~rlHYGHPD~~n~~f~~T--------------------- 397 (817)
T PF02364_consen 339 VAILGFREHIFSENVGSLGDFAAGQEQSFGTLFQRTLANPLVRLHYGHPDVFNRIFMTT--------------------- 397 (817)
T ss_pred ceEecccceEecCCcchHHHHhhhhhHHHHHHHHHHHhcchhhccCCCchhhhhhheec---------------------
Confidence 6777766655543322 2233334445444555554444434444433444433311
Q ss_pred HHHHHHhchhcccccccccccccccCCC----CCCccchHHHHHHHHhcCCeEEEeCCCCCceecccCC-CHHHHHHhhh
Q 012538 142 DELEKASKVLASCSYEKNTHWGKEMGLV----YGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPV-TLDIALVQMK 216 (461)
Q Consensus 142 ~~~~~~a~~~~~c~ye~~t~wg~~~G~~----~~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~-~l~~~~~Qr~ 216 (461)
.||.. .=+++||+..|+...+||-++.+|+-. .+|-.-+ .+.+-..=-.
T Consensus 398 -----------------------RGGvSKAsk~lhLsEDIfaG~n~~lRGG~i~h~ey~---qcGKGRD~Gf~~I~~F~~ 451 (817)
T PF02364_consen 398 -----------------------RGGVSKASKGLHLSEDIFAGMNATLRGGRIKHCEYI---QCGKGRDVGFNSILNFET 451 (817)
T ss_pred -----------------------cCccchHhhcccccHHHHHHHHHHhcCCceeehhhh---hcccccccCchhhhhhHh
Confidence 12211 228999999999999999999998632 2344333 4555555555
Q ss_pred hhcchhHHHHHhhccccccccCcccccchhhhh
Q 012538 217 RWSEGMFQIFLSKYCPFIYGHGKIKFGAQMGYC 249 (461)
Q Consensus 217 RWa~G~lqi~~~~~~p~~~~~~~l~~~qrl~y~ 249 (461)
+=+.|+-|..++|---.+ ..+|.+-+-+.+.
T Consensus 452 KI~~G~GEQ~LSRe~yrL--g~~ld~~R~LSfy 482 (817)
T PF02364_consen 452 KIASGMGEQMLSREYYRL--GTRLDFFRFLSFY 482 (817)
T ss_pred HhcCCccchhhhHHHHHh--hccCCHHHHHHHH
Confidence 668888877766521112 2567776666543
No 71
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=96.38 E-value=0.26 Score=50.10 Aligned_cols=42 Identities=19% Similarity=0.168 Sum_probs=38.4
Q ss_pred CCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhh
Q 012538 11 HNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLL 57 (461)
Q Consensus 11 ~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~ 57 (461)
..+|++|+|+|++. ++||+++++|||... +|+.+.+++..+.
T Consensus 75 n~G~~~A~~~G~~~----A~gd~vv~~DaD~q~-~p~~i~~l~~~~~ 116 (325)
T PRK10714 75 NYGQHSAIMAGFSH----VTGDLIITLDADLQN-PPEEIPRLVAKAD 116 (325)
T ss_pred CCCHHHHHHHHHHh----CCCCEEEEECCCCCC-CHHHHHHHHHHHH
Confidence 35899999999997 889999999999999 7999999998875
No 72
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=94.26 E-value=0.091 Score=50.21 Aligned_cols=45 Identities=18% Similarity=0.161 Sum_probs=39.6
Q ss_pred CCCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcc
Q 012538 10 PHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDE 59 (461)
Q Consensus 10 ~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~ 59 (461)
+..+++.+.|.|++. +.+|+|+++|+|..+ +|+.++++...+.++
T Consensus 55 ~~~g~~~~~n~~~~~----a~~d~vl~lDaD~~~-~~~~~~~l~~~~~~~ 99 (229)
T cd02511 55 WWDGFGAQRNFALEL----ATNDWVLSLDADERL-TPELADEILALLATD 99 (229)
T ss_pred CCCChHHHHHHHHHh----CCCCEEEEEeCCcCc-CHHHHHHHHHHHhCC
Confidence 345799999999997 789999999999999 799999999888653
No 73
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=93.10 E-value=0.2 Score=48.10 Aligned_cols=142 Identities=16% Similarity=0.146 Sum_probs=79.3
Q ss_pred CChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchhHHHHHH
Q 012538 12 NFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVN 91 (461)
Q Consensus 12 ~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~ 91 (461)
--||-.||.|...+....+.|+++.-|.|.+| ..+.+... | + +.|..+.-.- |.+. ...
T Consensus 48 FNR~~llNvG~~~a~k~~~~dc~i~hDVDllP-~~~~~~y~-~---~----------~~p~H~s~~~--~~~~--~~l-- 106 (219)
T cd00899 48 FNRAKLLNVGFLEALKDGDWDCFIFHDVDLLP-ENDRNLYG-C---E----------EGPRHLSVPL--DKFH--YKL-- 106 (219)
T ss_pred chhhhhhhHHHHHHhhcCCccEEEEecccccc-cCcccccc-C---C----------CCCeEEEEee--cccc--ccc--
Confidence 45999999977654323457999999999999 56554321 1 1 1122111100 0000 000
Q ss_pred HHHHHHHhhcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccccccccccccCCCCC
Q 012538 92 QVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYG 171 (461)
Q Consensus 92 ~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~G~~~~ 171 (461)
...-+.|.+..++|+.+..+.. |. +..| ||.
T Consensus 107 ----------py~~~~Gg~~~~~k~~f~~VNG--------------------------------f~-n~f~----GWG-- 137 (219)
T cd00899 107 ----------PYKTYFGGVLALTREQFRKVNG--------------------------------FS-NAYW----GWG-- 137 (219)
T ss_pred ----------CcccccccceeeEHHHHHHhCC--------------------------------cC-CcCc----cCC--
Confidence 0112456678899998865410 10 0112 232
Q ss_pred CccchHHHHHHHHhcCCeEEEeCCCCCce----------ecccCCCHHHHHHhhhhhcchhHHH
Q 012538 172 CAAEDVVTGLTIQCRGWKSMYFKPNKPAF----------LGVAPVTLDIALVQMKRWSEGMFQI 225 (461)
Q Consensus 172 ~vtED~~t~~~l~~~Gwrs~y~~~~~~~~----------~g~~P~~l~~~~~Qr~RWa~G~lqi 225 (461)
.||-|++.||..+|.+....+....-. ....|.-+.....+++||+...+.-
T Consensus 138 --gEDdd~~~Rl~~~g~~~~r~~~~~~~~~hL~H~~~~r~~~N~~r~~~l~~~~~~~~~dGLns 199 (219)
T cd00899 138 --GEDDDLYNRIKAAGLKITRPSGDTGRYKMIRHIHDKRNRDNPNRFALLQNSRERDHSDGLNS 199 (219)
T ss_pred --cchHHHHHHHHHCCCeEEeccCcccceeeeecCCCcccccCHHHHHHHHhhCeEeccCCccc
Confidence 599999999999998876654321100 1223445566677788888777653
No 74
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=85.56 E-value=1 Score=43.19 Aligned_cols=49 Identities=16% Similarity=0.261 Sum_probs=38.6
Q ss_pred CChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHh-hcccCCCcEEEE
Q 012538 12 NFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFL-LDEKREHEIAFV 68 (461)
Q Consensus 12 ~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f-~d~~~~~~va~V 68 (461)
..-+-++|.|++. +++||++.+.-|..+.+++++.+++..| .|| ++|.+
T Consensus 40 ~s~~~~yN~a~~~----a~~~ylvflHqDv~i~~~~~l~~il~~~~~~~----~~G~i 89 (217)
T PF13712_consen 40 KSMAAAYNEAMEK----AKAKYLVFLHQDVFIINENWLEDILEIFEEDP----NIGMI 89 (217)
T ss_dssp S-TTTHHHHHGGG------SSEEEEEETTEE-SSHHHHHHHHHHHHH-T----TEEEE
T ss_pred cCHHHHHHHHHHh----CCCCEEEEEeCCeEEcchhHHHHHHHHHhhCC----CccEE
Confidence 4578899999997 8999999999999887899999999999 666 56655
No 75
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=83.52 E-value=4.3 Score=38.10 Aligned_cols=94 Identities=14% Similarity=0.073 Sum_probs=56.0
Q ss_pred ChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchhHHHHHHH
Q 012538 13 FKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVNQ 92 (461)
Q Consensus 13 ~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~ 92 (461)
+=.-|--+++++ +.|||+++.|||--- +|.++.+.+..-.| .+.++|-.- +|-+...-+-|. +-=.
T Consensus 75 GLgtAy~hgl~~----a~g~fiviMDaDlsH-hPk~ipe~i~lq~~----~~~div~GT-RYa~~ggV~gW~----mkRk 140 (238)
T KOG2978|consen 75 GLGTAYIHGLKH----ATGDFIVIMDADLSH-HPKFIPEFIRLQKE----GNYDIVLGT-RYAGGGGVYGWD----MKRK 140 (238)
T ss_pred cchHHHHhhhhh----ccCCeEEEEeCccCC-CchhHHHHHHHhhc----cCcceeeee-eEcCCCceecch----hhHH
Confidence 456688888987 899999999999887 79999887655433 345666433 222111101111 1111
Q ss_pred HHHHHH-------hhcCCccccccceeEechhhcC
Q 012538 93 VELAGI-------GSYDAALYCGTGCFHRRESLSG 120 (461)
Q Consensus 93 ~~~~g~-------~~~~~~~~~Gtg~~~RR~aL~~ 120 (461)
++-+|- -+.+..-.+||=-++|++.|.-
T Consensus 141 ~IS~gAn~la~~ll~~~~sdltGsFrLykk~vl~~ 175 (238)
T KOG2978|consen 141 IISRGANFLARILLNPGVSDLTGSFRLYKKEVLEK 175 (238)
T ss_pred HHhhhhHHHHHHhccCCCccCcceeeeehHHHHHh
Confidence 122222 2233444678888899999853
No 76
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases. The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=83.07 E-value=1 Score=35.98 Aligned_cols=30 Identities=17% Similarity=-0.090 Sum_probs=18.9
Q ss_pred cCCCCCCc---cchHHHHHHHHhcCCeEEEeCC
Q 012538 166 MGLVYGCA---AEDVVTGLTIQCRGWKSMYFKP 195 (461)
Q Consensus 166 ~G~~~~~v---tED~~t~~~l~~~Gwrs~y~~~ 195 (461)
+||++.-. -||.|+..|+..+|.+....+.
T Consensus 35 nGfde~f~gWG~ED~Dl~~Rl~~~g~~~~~~~~ 67 (78)
T PF02709_consen 35 NGFDERFWGWGGEDDDLYNRLWKAGLKIVRVPG 67 (78)
T ss_dssp TSS-SS-TSCSSHHHHHHHHHHHTT---B-SST
T ss_pred CCCCccccccCccHHHHHHHHHHcCCeEEecCC
Confidence 66665433 3999999999999999876554
No 77
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=80.22 E-value=4.6 Score=41.41 Aligned_cols=82 Identities=13% Similarity=0.194 Sum_probs=53.9
Q ss_pred HHHHHHHhccccCCCCEEEEeCCCCCcCchHHH---HHHHHHhhcccCCCcEEEEecCcccccCCCcccchhH-HHHHHH
Q 012538 17 AMNALIRVSSVISNGPVILNLDCDMYANDGDAI---REALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANS-YLVVNQ 92 (461)
Q Consensus 17 aLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l---~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~-~~~f~~ 92 (461)
|+|.+.+. .++++++++|.|.++ .|||+ +++++.+. .++.+..|.+- |.+........ ...+
T Consensus 88 aln~vF~~----~~~~~vIILEDDl~~-sPdFf~yf~~~l~~y~---~D~~v~~ISa~----NdnG~~~~~~~~~~~l-- 153 (334)
T cd02514 88 ALTQTFNL----FGYSFVIILEDDLDI-APDFFSYFQATLPLLE---EDPSLWCISAW----NDNGKEHFVDDTPSLL-- 153 (334)
T ss_pred HHHHHHHh----cCCCEEEEECCCCcc-CHhHHHHHHHHHHHHh---cCCCEEEEEee----ccCCcccccCCCcceE--
Confidence 88888876 689999999999999 89955 78887776 34578888542 11100000000 1111
Q ss_pred HHHHHHhhcCCccccccceeEechhhcC
Q 012538 93 VELAGIGSYDAALYCGTGCFHRRESLSG 120 (461)
Q Consensus 93 ~~~~g~~~~~~~~~~Gtg~~~RR~aL~~ 120 (461)
....+++|.|-+.+|++..+
T Consensus 154 --------yrs~ff~glGWml~r~~W~e 173 (334)
T cd02514 154 --------YRTDFFPGLGWMLTRKLWKE 173 (334)
T ss_pred --------EEecCCCchHHHHHHHHHHH
Confidence 12346789998989998864
No 78
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=75.12 E-value=4.3 Score=41.23 Aligned_cols=45 Identities=20% Similarity=0.211 Sum_probs=32.5
Q ss_pred HHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEE
Q 012538 19 NALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFV 68 (461)
Q Consensus 19 N~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~V 68 (461)
|.|++. +..++++++|+|++| .+++-+....+........+.++|
T Consensus 120 NvAr~~----a~T~~v~~~DvD~~p-s~~l~~~l~~~~~~~~~~~~~a~V 164 (317)
T PF13896_consen 120 NVARSG----ARTDYVFLLDVDFLP-SPGLYEKLLRFARRNIDKSKTAFV 164 (317)
T ss_pred HHHHHh----cCcceEEEecceeee-CcchHHHHHHHhhhhccCCceEEE
Confidence 445554 789999999999999 688877776665433344567776
No 79
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=74.62 E-value=6.2 Score=38.97 Aligned_cols=64 Identities=20% Similarity=0.147 Sum_probs=38.3
Q ss_pred HHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcE-EEEecCcccccCCC
Q 012538 15 AGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEI-AFVQHPQRFDNICK 79 (461)
Q Consensus 15 AGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~v-a~VQ~pq~f~n~~~ 79 (461)
+--=|+|...|....+.++|+.+|+|++. ..|-..+.+..-.-.+...++ |+.--|..+-|...
T Consensus 79 ~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~-S~dnF~k~l~~~~ikk~~tnI~a~~vlPV~~LNk~~ 143 (346)
T COG4092 79 TICANNGADYSHEKCESNLVLFLDVDCFG-SSDNFAKMLSIATIKKMRTNIDAPLVLPVYHLNKAD 143 (346)
T ss_pred hhhhhccchhhhccccccEEEEEeccccc-cHHHHHHHHHHHHHHHHHhccCcceeeeeeecchhh
Confidence 33446666665445679999999999999 455554544222111112244 56667777777543
No 80
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=71.35 E-value=6.6 Score=34.11 Aligned_cols=36 Identities=25% Similarity=0.193 Sum_probs=29.9
Q ss_pred CCCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHH
Q 012538 10 PHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIR 50 (461)
Q Consensus 10 ~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~ 50 (461)
...+++.|+|.++.. +.+|+++.+|+|.+ ..+....
T Consensus 67 ~~~g~~~~~~~~~~~----~~~~~~~~~d~d~~-~~~~~~~ 102 (291)
T COG0463 67 RNGGLGAARNAGLEY----ARGDYIVFLDADDQ-HPPELIP 102 (291)
T ss_pred cCCChHHHHHhhHHh----ccCCEEEEEccCCC-CCHHHHH
Confidence 457899999999998 77899999999999 6554444
No 81
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []. It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.
Probab=67.83 E-value=10 Score=37.13 Aligned_cols=27 Identities=22% Similarity=0.218 Sum_probs=22.2
Q ss_pred CCCCEEEEeCCCCCcCchHHHHHHHHHh
Q 012538 29 SNGPVILNLDCDMYANDGDAIREALCFL 56 (461)
Q Consensus 29 s~~~~il~lDaD~~~~~p~~l~~~~~~f 56 (461)
++.+.++.+|-|+++ +.+-|++.+.-+
T Consensus 85 ~~~~Wf~~~DDDtyv-~~~~L~~~L~~~ 111 (252)
T PF02434_consen 85 SDKDWFCFADDDTYV-NVENLRRLLSKY 111 (252)
T ss_dssp HT-SEEEEEETTEEE--HHHHHHHHTTS
T ss_pred CCceEEEEEeCCcee-cHHHHHHHHhhC
Confidence 678999999999999 698888887766
No 82
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=63.42 E-value=1.9e+02 Score=35.27 Aligned_cols=192 Identities=16% Similarity=0.100 Sum_probs=98.3
Q ss_pred ccCCCCCCC--CChHHHHHHHHHhccccCCCCEEEEeCC--CCCcCchHHHHHHHHHhhccc-CCCcEEEEecCcccccC
Q 012538 3 REKRPGCPH--NFKAGAMNALIRVSSVISNGPVILNLDC--DMYANDGDAIREALCFLLDEK-REHEIAFVQHPQRFDNI 77 (461)
Q Consensus 3 Rekrp~~~~--~~KAGaLN~~l~~~~~~s~~~~il~lDa--D~~~~~p~~l~~~~~~f~d~~-~~~~va~VQ~pq~f~n~ 77 (461)
|-|-||.+. .||+.|-|+|+=. +.||++=.+|+ |++.-+.==+|.++.-|..-. ....++.+-.+......
T Consensus 1039 rIkLpG~pilGeGKpeNQNhaiiF----tRGE~iQtIDmNQDnYlEE~lKmRnlL~EF~~~~~g~r~ptIlG~RE~IFt~ 1114 (1679)
T KOG0916|consen 1039 RIKLPGPPILGEGKPENQNHAIIF----TRGEAIQTIDMNQDNYLEEALKMRNLLQEFEELHLGIRPPTILGAREHIFTG 1114 (1679)
T ss_pred EEeCCCCCcCCCCCCcccCceeee----ecchhhheecccchHHHHHHHHHHHHHHHHHhhcCCCCCCceeeehhheecC
Confidence 445666554 5799999999987 99999999998 666622222344555554221 12234445444433322
Q ss_pred CCc---ccchhHHHHHHHHHHHHHhhcCC-ccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcc
Q 012538 78 CKN---DLYANSYLVVNQVELAGIGSYDA-ALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLAS 153 (461)
Q Consensus 78 ~~~---d~~~~~~~~f~~~~~~g~~~~~~-~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 153 (461)
+-+ |-..++.+.|--.-++-+...++ -+.-|.=-++.|-... .
T Consensus 1115 svssLa~fms~qEqSFvTlgqR~LA~p~~vr~HYGHPD~~drif~~---------------T------------------ 1161 (1679)
T KOG0916|consen 1115 SVSSLAWFMSGQEQSFVTLGQRTLANPGGVRLHYGHPDVFDRIFHI---------------T------------------ 1161 (1679)
T ss_pred CchHHHHHHccCccchhhHHHHHhccccceeeecCCCcHhhhhhhh---------------c------------------
Confidence 211 11222323333333444444333 2334444444442211 0
Q ss_pred cccccccccccccCCC----CCCccchHHHHHHHHhcCCeEEEeCCCCCceecccCC-CHHHHHHhhhhhcchhHHHHHh
Q 012538 154 CSYEKNTHWGKEMGLV----YGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPV-TLDIALVQMKRWSEGMFQIFLS 228 (461)
Q Consensus 154 c~ye~~t~wg~~~G~~----~~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~-~l~~~~~Qr~RWa~G~lqi~~~ 228 (461)
.||.. .=++.||+..|+.-..||-++.+|+- ...|-.-+ .+.+-..=-.+=+.|+-|-.++
T Consensus 1162 -----------RGGvSKAsk~inlsEDIfAG~n~tlRgG~itH~EY---iQvGKGRDvGlnqI~~FeaKia~G~GEQ~LS 1227 (1679)
T KOG0916|consen 1162 -----------RGGVSKASKGINLSEDIFAGFNATLRGGNITHHEY---IQVGKGRDVGLNQISNFEAKIANGNGEQTLS 1227 (1679)
T ss_pred -----------cccchHhhcccccchHhhhhhhHHhhCCCccccee---eecccccccCcchhhhhhhhhcCCCcchhhh
Confidence 12211 12799999999999999999988862 11222211 2222222233446777766665
Q ss_pred hccccccccCcccccchhh
Q 012538 229 KYCPFIYGHGKIKFGAQMG 247 (461)
Q Consensus 229 ~~~p~~~~~~~l~~~qrl~ 247 (461)
|-- ...| .++.+-+-|.
T Consensus 1228 Rd~-YrLG-~~ldffRmLS 1244 (1679)
T KOG0916|consen 1228 RDY-YRLG-TQLDFFRMLS 1244 (1679)
T ss_pred HHH-HHhc-ccccHHHHHH
Confidence 411 1112 3566555553
No 83
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional
Probab=60.08 E-value=26 Score=36.52 Aligned_cols=41 Identities=10% Similarity=0.035 Sum_probs=30.6
Q ss_pred hHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhc
Q 012538 14 KAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLD 58 (461)
Q Consensus 14 KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d 58 (461)
....+-+|++. .+.|++++.|||+=.-+++.+++++..+.+
T Consensus 83 r~~SV~~gL~~----l~~d~VLVhdadrPfv~~e~I~~li~~~~~ 123 (378)
T PRK09382 83 RQESVRNALEA----LDSEYVLIHDAARPFVPKELIDRLIEALDK 123 (378)
T ss_pred HHHHHHHHHHh----cCCCeEEEeeccccCCCHHHHHHHHHHhhc
Confidence 45668888886 345999999999633368999998876653
No 84
>PLN03153 hypothetical protein; Provisional
Probab=57.10 E-value=38 Score=36.71 Aligned_cols=30 Identities=17% Similarity=0.109 Sum_probs=24.3
Q ss_pred cCCCCEEEEeCCCCCcCchHHHHHHHHHhhcc
Q 012538 28 ISNGPVILNLDCDMYANDGDAIREALCFLLDE 59 (461)
Q Consensus 28 ~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~ 59 (461)
..+.+.++++|.|++. .++-|.+.+.-+ |+
T Consensus 208 ~pd~kWfVf~DDDTyf-~~~NLv~~Ls~Y-Dp 237 (537)
T PLN03153 208 LPDVRWFVLGDDDTIF-NADNLVAVLSKY-DP 237 (537)
T ss_pred CCCCCEEEEecCCccc-cHHHHHHHHhhc-CC
Confidence 3788999999999999 587777777665 54
No 85
>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.
Probab=49.46 E-value=69 Score=28.83 Aligned_cols=41 Identities=20% Similarity=0.284 Sum_probs=33.7
Q ss_pred CCChHHHHHHHHHhccccCCCCEEEEeCCCC-CcCchHHHHHHHHHh
Q 012538 11 HNFKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFL 56 (461)
Q Consensus 11 ~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~-~~~~p~~l~~~~~~f 56 (461)
..+-.+++..|++. .+.+.+++++||+ .+ +++.+++++..+
T Consensus 68 ~~G~~~si~~~l~~----~~~~~vlv~~~D~P~i-~~~~i~~l~~~~ 109 (181)
T cd02503 68 GKGPLAGILAALRA----APADWVLVLACDMPFL-PPELLERLLAAA 109 (181)
T ss_pred CCCCHHHHHHHHHh----cCCCeEEEEeCCcCCC-CHHHHHHHHHhh
Confidence 34667899999997 4589999999999 45 799999888766
No 86
>TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial. In many molybdopterin-containing enzymes, including nitrate reductase and dimethylsulfoxide reductase, the cofactor is molybdopterin-guanine dinucleotide. The family described here contains MobA, molybdopterin-guanine dinucleotide biosynthesis protein A, from the Proteobacteria only. MobA can reconstitute molybdopterin-guanine dinucleotide biosynthesis without the product of the neighboring gene MobB. The probable MobA proteins of other lineages differ sufficiently that they are not included in scope of this family.
Probab=43.30 E-value=1e+02 Score=27.85 Aligned_cols=41 Identities=17% Similarity=0.186 Sum_probs=33.8
Q ss_pred CChHHHHHHHHHhccccCCCCEEEEeCCCC-CcCchHHHHHHHHHhh
Q 012538 12 NFKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFLL 57 (461)
Q Consensus 12 ~~KAGaLN~~l~~~~~~s~~~~il~lDaD~-~~~~p~~l~~~~~~f~ 57 (461)
.+-.+++-.|++. .+.|.+++++||+ .+ +++.+++++..+.
T Consensus 73 ~g~~~si~~al~~----~~~~~vlv~~~D~P~i-~~~~i~~l~~~~~ 114 (186)
T TIGR02665 73 PGPLAGILAGLRW----AGTDWVLTVPCDTPFL-PEDLVARLAAALE 114 (186)
T ss_pred CCCHHHHHHHHHh----cCCCeEEEEecCCCcC-CHHHHHHHHHHhh
Confidence 4677888888886 4568999999998 67 7999999887775
No 87
>cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=41.81 E-value=58 Score=29.11 Aligned_cols=43 Identities=12% Similarity=0.142 Sum_probs=33.9
Q ss_pred CChHHHHHHHHHhccccCCCCEEEEeCCCC-CcCchHHHHHHHHHhh
Q 012538 12 NFKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFLL 57 (461)
Q Consensus 12 ~~KAGaLN~~l~~~~~~s~~~~il~lDaD~-~~~~p~~l~~~~~~f~ 57 (461)
.+-+.++..|++... .+.|.+++++||+ .+ +++.+++++..+.
T Consensus 74 ~G~~~~i~~al~~~~--~~~~~vlv~~~D~P~i-~~~~i~~l~~~~~ 117 (186)
T cd04182 74 EGMSSSLAAGLEALP--ADADAVLILLADQPLV-TAETLRALIDAFR 117 (186)
T ss_pred hCHHHHHHHHHHhcc--ccCCEEEEEeCCCCCC-CHHHHHHHHHHHH
Confidence 456788899998732 2478999999999 56 6899999887775
No 88
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane
Probab=41.17 E-value=60 Score=30.00 Aligned_cols=37 Identities=19% Similarity=0.275 Sum_probs=26.7
Q ss_pred HHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHh
Q 012538 16 GAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFL 56 (461)
Q Consensus 16 GaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f 56 (461)
.+++.+.+.. .+.+|++-.|-|+++ +++-|.+.+.-.
T Consensus 69 ~~~~w~~~~c---~~~~~v~k~DDD~~v-n~~~l~~~L~~~ 105 (195)
T PF01762_consen 69 AGLKWASKHC---PNAKYVLKVDDDVFV-NPDRLVSFLKSL 105 (195)
T ss_pred HHHHHHHhhC---CchhheeecCcEEEE-ehHHhhhhhhhc
Confidence 4566666652 458999999999999 687766655433
No 89
>PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed
Probab=40.48 E-value=60 Score=29.74 Aligned_cols=41 Identities=12% Similarity=0.088 Sum_probs=32.9
Q ss_pred ChHHHHHHHHHhccccCCCCEEEEeCCCC-CcCchHHHHHHHHHhhc
Q 012538 13 FKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFLLD 58 (461)
Q Consensus 13 ~KAGaLN~~l~~~~~~s~~~~il~lDaD~-~~~~p~~l~~~~~~f~d 58 (461)
+-.+++..+++. .+.|.+++++||+ .+ +++.+++++..+.+
T Consensus 75 g~~~~i~~~l~~----~~~~~vlv~~~D~P~i-~~~~i~~l~~~~~~ 116 (193)
T PRK00317 75 GPLAGILAGLKQ----ARTEWVLVVPCDTPFI-PPDLVARLAQAAGK 116 (193)
T ss_pred CCHHHHHHHHHh----cCCCeEEEEcCCcCCC-CHHHHHHHHHhhhc
Confidence 445778888885 5689999999999 66 79999998877643
No 90
>PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B ....
Probab=38.22 E-value=89 Score=27.38 Aligned_cols=55 Identities=16% Similarity=0.211 Sum_probs=40.6
Q ss_pred CChHHHHHHHHHhccccCCCCEEEEeCCCC-CcCchHHHHHHHHHhhcccCCCcEEEEecCc
Q 012538 12 NFKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFLLDEKREHEIAFVQHPQ 72 (461)
Q Consensus 12 ~~KAGaLN~~l~~~~~~s~~~~il~lDaD~-~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq 72 (461)
.+=..+|=.|++. ..+.+.++++.||+ .+ +++.+++++..+.+ .+.+++++..+.
T Consensus 70 ~G~~~sl~~a~~~---~~~~~~vlv~~~D~p~~-~~~~l~~l~~~~~~--~~~~i~~~~~~~ 125 (160)
T PF12804_consen 70 QGPLASLLAALSQ---LPSSEPVLVLPCDQPFL-SPELLRRLLEALEK--SPADIVVPVFRG 125 (160)
T ss_dssp CSHHHHHHHHHHT---STTSSEEEEEETTETTS--HHHHHHHHHHHHH--TTTSEEEEEETT
T ss_pred CChHHHHHHHHHh---cccCCCcEEEeCCcccc-CHHHHHHHHHHHhc--cCCcEEEEEECC
Confidence 5667778888876 12789999999999 46 79999999988863 234777776554
No 91
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=35.94 E-value=52 Score=33.01 Aligned_cols=44 Identities=27% Similarity=0.184 Sum_probs=34.9
Q ss_pred CCCChHHHHHHHHHhccccCCCCEEEEeCCC--CCcCchHHHHHHHHHhh
Q 012538 10 PHNFKAGAMNALIRVSSVISNGPVILNLDCD--MYANDGDAIREALCFLL 57 (461)
Q Consensus 10 ~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD--~~~~~p~~l~~~~~~f~ 57 (461)
+..+|.||..-+.-+ +.|++++.-||| +..+|-+.|.+++.-..
T Consensus 141 ~nrgKGgAvR~g~l~----~rG~~ilfadAdGaTkf~d~ekLe~al~~~~ 186 (323)
T KOG2977|consen 141 KNRGKGGAVRKGMLS----SRGQKILFADADGATKFADLEKLEKALNDKA 186 (323)
T ss_pred ccCCCCcceehhhHh----ccCceEEEEcCCCCccCCCHHHHHHHHHhhc
Confidence 345799999998887 889999999999 44447788888876544
No 92
>TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family. Members of this protein family are probable accessory proteins for the biosynthesis of enzymes related to xanthine dehydrogenase. Comparative genomics suggests a role in the maturation of selenium-dependent molybdenum hydroxylases, although a tenuous alternative hypothesis is a role for this protein (with a requirement for SelD, the selenium donor protein in the selenocysteine and selenouridine biosynthesis pathways) metabolizing a selenium-containing substrate such as selenate.
Probab=32.92 E-value=82 Score=28.35 Aligned_cols=42 Identities=14% Similarity=0.014 Sum_probs=31.7
Q ss_pred ChHHHHHHHHHhccccCCCCEEEEeCCCC-CcCchHHHHHHHHHhhc
Q 012538 13 FKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFLLD 58 (461)
Q Consensus 13 ~KAGaLN~~l~~~~~~s~~~~il~lDaD~-~~~~p~~l~~~~~~f~d 58 (461)
+-++++..|++. ..+.|.++++|||+ .+ +++.+++++..+.+
T Consensus 75 g~~~si~~~l~~---~~~~~~vlv~~~D~P~i-~~~~i~~l~~~~~~ 117 (188)
T TIGR03310 75 GQSSSIKLGLEL---PVQSDGYLFLLGDQPFV-TPDIIQLLLEAFAL 117 (188)
T ss_pred CHHHHHHHHhcC---CCCCCEEEEEeCCcCCC-CHHHHHHHHHHHHh
Confidence 456677777772 24678999999999 45 68999998877653
No 93
>PF04724 Glyco_transf_17: Glycosyltransferase family 17; InterPro: IPR006813 This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (2.4.1.144 from EC). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression [, ].; GO: 0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0016020 membrane
Probab=31.10 E-value=60 Score=33.62 Aligned_cols=35 Identities=23% Similarity=0.424 Sum_probs=25.6
Q ss_pred HHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHH
Q 012538 16 GAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREA 52 (461)
Q Consensus 16 GaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~ 52 (461)
.+|+..++..+ ..++|+|++-|.|.+| +|+.|+.+
T Consensus 165 ~~l~~l~~~~~-~~~dDliivSDvDEIP-~p~~l~~L 199 (356)
T PF04724_consen 165 NALNGLLRLAG-IQDDDLIIVSDVDEIP-SPETLKFL 199 (356)
T ss_pred HHHHHHhhhcC-CCCCCEEEEcCccccc-CHHHHHHH
Confidence 45555555433 5679999999999999 68877643
No 94
>PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional
Probab=30.28 E-value=2.2e+02 Score=26.39 Aligned_cols=42 Identities=21% Similarity=0.100 Sum_probs=32.3
Q ss_pred ChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhc
Q 012538 13 FKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLD 58 (461)
Q Consensus 13 ~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d 58 (461)
+=..++-.|++. .+.++++++|||+-.-.++.+++++....+
T Consensus 79 G~~~si~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 120 (200)
T PRK02726 79 GPLVAFAQGLPQ----IKTEWVLLLACDLPRLTVDVLQEWLQQLEN 120 (200)
T ss_pred ChHHHHHHHHHh----CCCCcEEEEeCCCCCCCHHHHHHHHHHhhc
Confidence 445677788876 456899999999865579999988877643
No 95
>PLN02728 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Probab=30.09 E-value=1.7e+02 Score=28.66 Aligned_cols=41 Identities=10% Similarity=-0.027 Sum_probs=28.8
Q ss_pred HHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhh
Q 012538 15 AGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLL 57 (461)
Q Consensus 15 AGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~ 57 (461)
.+.+-+|++... .+.++|++.|+|+=.-.++.+++++....
T Consensus 104 ~~SV~~gl~~l~--~~~~~VlihDaarP~vs~~~i~~li~~~~ 144 (252)
T PLN02728 104 QDSVFNGLQEVD--ANSELVCIHDSARPLVTSADIEKVLKDAA 144 (252)
T ss_pred HHHHHHHHHhcc--CCCCEEEEecCcCCCCCHHHHHHHHHHHh
Confidence 566777777632 35789999999743336888888776554
No 96
>PF15050 SCIMP: SCIMP protein
Probab=29.64 E-value=94 Score=27.00 Aligned_cols=39 Identities=21% Similarity=0.513 Sum_probs=22.1
Q ss_pred cccchhhhHHHHHHHHHH----HHHHH-HHHHHhcCCccceEEec
Q 012538 314 SWWNLQRMLIIRRTTAFF----FGFVD-CIVKQMGLSQTAFAITA 353 (461)
Q Consensus 314 ~ww~~qr~w~i~~~~~~~----~~~~~-~llk~l~~~~~~F~VT~ 353 (461)
+||++. ||.|.+++.-+ .+++- -+.+.+.++..+++++.
T Consensus 2 ~WWr~n-FWiiLAVaII~vS~~lglIlyCvcR~~lRqGkkweiak 45 (133)
T PF15050_consen 2 SWWRDN-FWIILAVAIILVSVVLGLILYCVCRWQLRQGKKWEIAK 45 (133)
T ss_pred chHHhc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccceecc
Confidence 588874 78876554222 11111 12355556778898875
No 97
>cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars. Nucleotidyltransferases transfer nucleotides onto phosphosugars. The enzyme family includes Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase. The products are activated sugars that are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides.
Probab=26.96 E-value=1.2e+02 Score=27.87 Aligned_cols=42 Identities=24% Similarity=0.176 Sum_probs=31.2
Q ss_pred CChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcc
Q 012538 12 NFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDE 59 (461)
Q Consensus 12 ~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~ 59 (461)
.+-++++-.+++. .+.+.+++++||++. +.++ .+++.++.++
T Consensus 81 ~g~~~al~~~~~~----~~~~~~lv~~~D~~~-~~~~-~~~~~~~~~~ 122 (217)
T cd04181 81 LGTAGAVRNAEDF----LGDDDFLVVNGDVLT-DLDL-SELLRFHREK 122 (217)
T ss_pred CccHHHHHHhhhh----cCCCCEEEEECCeec-CcCH-HHHHHHHHhc
Confidence 3568999999886 257789999999998 6764 5566666543
No 98
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU. The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively.
Probab=26.65 E-value=2.2e+02 Score=26.36 Aligned_cols=44 Identities=11% Similarity=-0.008 Sum_probs=33.9
Q ss_pred CChHHHHHHHHHhccccCCCCEEEEeCCCC-CcCchHHHHHHHHHhhc
Q 012538 12 NFKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFLLD 58 (461)
Q Consensus 12 ~~KAGaLN~~l~~~~~~s~~~~il~lDaD~-~~~~p~~l~~~~~~f~d 58 (461)
.+.++++-+++.... .+.+.++++|||+ .. +++.+.+++..+.+
T Consensus 73 ~g~~~ai~~a~~~~~--~~~~~vli~~~D~p~~-~~~~i~~l~~~~~~ 117 (229)
T cd02540 73 LGTGHAVKQALPALK--DFEGDVLVLYGDVPLI-TPETLQRLLEAHRE 117 (229)
T ss_pred CCCHHHHHHHHHhhc--cCCCeEEEEeCCcccc-CHHHHHHHHHHHHh
Confidence 467999999998732 1368899999999 45 57888888877754
No 99
>cd02524 G1P_cytidylyltransferase G1P_cytidylyltransferase catalyzes the production of CDP-D-Glucose. Alpha-D-Glucose-1-phosphate Cytidylyltransferase catalyzes the production of CDP-D-Glucose from alpha-D-Glucose-1-phosphate and MgCTP as substrate. CDP-D-Glucose is the precursor for synthesizing four of the five naturally occurring 3,6-dideoxy sugars-abequose (3,6-dideoxy-D-Xylo-hexose), ascarylose (3,6-dideoxy-L-arabino-hexose), paratose (3,6-dideoxy-D-ribohexose), and tyvelose (3,6-dideoxy-D-arabino-hexose. Deoxysugars are ubiquitous in nature where they function in a variety of biological processes, including cell adhesion, immune response, determination of ABO blood groups, fertilization, antibiotic function, and microbial pathogenicity.
Probab=26.09 E-value=1.4e+02 Score=28.59 Aligned_cols=40 Identities=13% Similarity=0.111 Sum_probs=31.0
Q ss_pred ChHHHHHHHHHhccccCCC-CEEEEeCCCCCcCchHHHHHHHHHhhc
Q 012538 13 FKAGAMNALIRVSSVISNG-PVILNLDCDMYANDGDAIREALCFLLD 58 (461)
Q Consensus 13 ~KAGaLN~~l~~~~~~s~~-~~il~lDaD~~~~~p~~l~~~~~~f~d 58 (461)
+-+|++=.+.+. .+. +.++++++|++. +.+. .+++.++.+
T Consensus 103 ~t~~al~~a~~~----~~~~~~~lv~~gD~i~-~~dl-~~ll~~h~~ 143 (253)
T cd02524 103 MTGGRLKRVRRY----LGDDETFMLTYGDGVS-DVNI-NALIEFHRS 143 (253)
T ss_pred ccHHHHHHHHHh----cCCCCeEEEEcCCEEE-CCCH-HHHHHHHHH
Confidence 358898888886 333 788999999998 6777 888877654
No 100
>PRK04987 fumarate reductase subunit C; Provisional
Probab=25.49 E-value=4.7e+02 Score=23.09 Aligned_cols=69 Identities=23% Similarity=0.472 Sum_probs=36.0
Q ss_pred ccccchh---hhHHHHHHHHHHHHHHHHHHHHhcCCccceEEecccccchhhhHHHhhhhhhcccchhHHHHHHHHHHHH
Q 012538 313 KSWWNLQ---RMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNL 389 (461)
Q Consensus 313 ~~ww~~q---r~w~i~~~~~~~~~~~~~llk~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~p~~ip~~~l~~l~l 389 (461)
..||... |++++++-++-+.+.+..++- .|. |.. |++.+. .++..+| ..+|. ++++|+
T Consensus 14 ~~WW~k~~FYr~YMlRE~T~v~~~~f~lvLl-~Gl----~~L--~~g~~a-----w~~f~~f-lqnPi------v~~lni 74 (130)
T PRK04987 14 PTWWKKLPFYRFYMLREATAVPAVWFSLVLI-YGL----FAL--KNGPEA-----WAGFVSF-LQNPI------VVILNI 74 (130)
T ss_pred cchhhcCcHHHHHHHHHHhHHHHHHHHHHHH-HHH----HHH--ccCHHH-----HHHHHHH-HhCcH------HHHHHH
Confidence 4688654 688888877766555553321 110 101 111111 1122234 23554 458899
Q ss_pred HHHHHHHHHHh
Q 012538 390 FSLIGGFIDII 400 (461)
Q Consensus 390 ~al~~g~~~~~ 400 (461)
++++..++-..
T Consensus 75 iaL~a~LlHa~ 85 (130)
T PRK04987 75 ITLAAALLHTK 85 (130)
T ss_pred HHHHHHHHHHH
Confidence 99988776543
No 101
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=24.21 E-value=3.4e+02 Score=25.65 Aligned_cols=59 Identities=15% Similarity=0.196 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHHHhhcccC--chhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCee
Q 012538 383 TLAMLNLFSLIGGFIDIIFLDFG--ALGNLMCQIILCGLMVLVNVPIYEALFIRKDKGCMPFS 443 (461)
Q Consensus 383 ~l~~l~l~al~~g~~~~~~~~~~--~~~~~~~~l~~~~~~v~~~~p~~~~l~~Rk~~~~~P~~ 443 (461)
.|+++.+++++-|+--++..+.. ..-.+++..+..|+.+..+|-++.-+-+ |+.++|.-
T Consensus 101 sLl~lg~~aLlsgitaff~~nA~~~GlItlll~a~vgGfamy~my~y~yr~~a--d~sqr~~~ 161 (226)
T COG4858 101 SLLFLGAMALLSGITAFFQKNAQVYGLITLLLTAVVGGFAMYIMYYYAYRMRA--DNSQRPGT 161 (226)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHhhhHHHHHHHHHHHHhhc--ccccCCch
Confidence 35677777888777766652211 1224455567778888888877766643 66666643
No 102
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=22.16 E-value=56 Score=26.23 Aligned_cols=27 Identities=30% Similarity=0.302 Sum_probs=19.1
Q ss_pred hHHHHHHHHHhccccCCCCEEEEeCCCCCc
Q 012538 14 KAGAMNALIRVSSVISNGPVILNLDCDMYA 43 (461)
Q Consensus 14 KAGaLN~~l~~~~~~s~~~~il~lDaD~~~ 43 (461)
+...+|...+. ..+++.++.+|||-++
T Consensus 58 ~~~~~~~~~~~---~~~~dWvl~~D~DEfl 84 (97)
T PF13704_consen 58 QRAWRNALIER---AFDADWVLFLDADEFL 84 (97)
T ss_pred HHHHHHHHHHh---CCCCCEEEEEeeeEEE
Confidence 34455555553 2578999999999776
No 103
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=21.71 E-value=80 Score=30.65 Aligned_cols=42 Identities=19% Similarity=0.131 Sum_probs=22.3
Q ss_pred ChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcc
Q 012538 13 FKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDE 59 (461)
Q Consensus 13 ~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~ 59 (461)
.|..+|..+++. ..++++|.-+|+|.++.|+++= +-.++++|
T Consensus 62 ~K~~~lr~~m~~---~P~~~wv~~lD~Dali~n~~~~--L~~~il~p 103 (239)
T PF05637_consen 62 AKIPALRAAMKK---YPEAEWVWWLDSDALIMNPDFS--LEEHILSP 103 (239)
T ss_dssp THHHHHHHHHHH----TT-SEEEEE-TTEEE----------------
T ss_pred HHHHHHHHHHHh---CCCCCEEEEEcCCeEEEecccc--cccccccc
Confidence 388999999975 4789999999999998777653 22345544
No 104
>PHA02688 ORF059 IMV protein VP55; Provisional
Probab=21.56 E-value=1.5e+02 Score=30.09 Aligned_cols=45 Identities=13% Similarity=0.161 Sum_probs=38.0
Q ss_pred CCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccC
Q 012538 29 SNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNI 77 (461)
Q Consensus 29 s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~ 77 (461)
.+.+||++++-|+.++++..+..++.-|.+. ++.++|....+.|.
T Consensus 115 ~~~~yivVlEDDnTi~~~~~~~~~I~~M~~n----~idilQLre~~~~~ 159 (323)
T PHA02688 115 KEDEYIVVVEDDNTLRDITTLHPIIKAMKEK----NIDILQLRETLHNN 159 (323)
T ss_pred cCCCeEEEEcCCCcccccHHHHHHHHHHHhc----CeEEEEeehhhhCC
Confidence 4578999999999999899999988888764 69999987767664
No 105
>KOG4440 consensus NMDA selective glutamate-gated ion channel receptor subunit GRIN1 [Inorganic ion transport and metabolism; Amino acid transport and metabolism; Signal transduction mechanisms]
Probab=20.30 E-value=2.7e+02 Score=31.13 Aligned_cols=19 Identities=5% Similarity=0.329 Sum_probs=15.0
Q ss_pred chhHHHHHHHHHHHHHHHH
Q 012538 406 ALGNLMCQIILCGLMVLVN 424 (461)
Q Consensus 406 ~~~~~~~~l~~~~~~v~~~ 424 (461)
+++.-++.++|++|.+++.
T Consensus 637 SfSARvLGmVWaGFaMIiV 655 (993)
T KOG4440|consen 637 SFSARVLGMVWAGFAMIIV 655 (993)
T ss_pred chhHHHHHHHHhhhheeee
Confidence 4677789999999987643
Done!