Query 012538
Match_columns 461
No_of_seqs 270 out of 1605
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 11:23:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012538.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012538hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 100.0 7.2E-40 2.5E-44 366.1 32.6 354 10-441 222-583 (802)
2 2z86_A Chondroitin synthase; G 99.1 2.1E-10 7.3E-15 124.1 8.5 145 11-209 159-336 (625)
3 3bcv_A Putative glycosyltransf 99.0 2E-09 6.7E-14 101.2 10.7 127 11-195 69-219 (240)
4 1xhb_A Polypeptide N-acetylgal 98.9 1.6E-09 5.6E-14 113.2 8.4 182 12-248 100-321 (472)
5 1qg8_A Protein (spore coat pol 98.8 3.7E-10 1.3E-14 107.4 -0.4 149 11-221 73-235 (255)
6 2z86_A Chondroitin synthase; G 98.7 4E-09 1.4E-13 114.0 4.8 154 11-225 439-597 (625)
7 2ffu_A Ppgalnact-2, polypeptid 98.7 7.6E-09 2.6E-13 109.1 6.8 181 12-248 132-353 (501)
8 2d7i_A Polypeptide N-acetylgal 98.7 1.7E-08 5.9E-13 108.4 9.3 167 11-233 181-378 (570)
9 2fy7_A Beta-1,4-galactosyltran 98.6 2.7E-08 9.2E-13 98.0 6.3 135 13-226 112-263 (287)
10 3ckj_A Putative uncharacterize 98.5 2.6E-07 8.9E-12 92.2 8.9 53 10-71 115-169 (329)
11 4fix_A UDP-galactofuranosyl tr 98.3 5.5E-07 1.9E-11 98.3 7.5 158 11-218 249-438 (657)
12 3l7i_A Teichoic acid biosynthe 98.2 2.2E-07 7.6E-12 102.5 0.0 128 11-195 68-199 (729)
13 2nxv_A ATP synthase subunits r 98.1 9.8E-06 3.4E-10 77.4 8.8 52 12-68 60-112 (249)
14 3f1y_A Mannosyl-3-phosphoglyce 97.7 0.00014 4.9E-09 74.2 11.0 51 11-70 164-216 (387)
15 2bo4_A Mannosylglycerate synth 96.2 0.029 9.8E-07 57.3 11.5 42 11-57 73-119 (397)
16 3lw6_A FI08434P, beta-4-galact 84.8 1.5 5E-05 42.4 6.4 139 11-226 96-250 (287)
17 1fo8_A Alpha-1,3-mannosyl-glyc 75.5 3.4 0.00012 41.1 5.6 46 16-69 89-137 (343)
18 2zu9_A Mannosyl-3-phosphoglyce 71.4 3.5 0.00012 41.7 4.7 40 12-54 143-182 (394)
19 2wvl_A Mannosyl-3-phosphoglyce 60.4 9.7 0.00033 38.1 5.2 40 9-50 139-178 (391)
20 2j0a_A Beta-1,3-N-acetylglucos 57.9 18 0.00063 34.4 6.7 30 29-60 92-121 (280)
21 3q80_A 2-C-methyl-D-erythritol 54.0 27 0.00091 32.2 6.9 45 14-58 83-127 (231)
22 3d5n_A Q97W15_sulso; NESG, SSR 44.9 36 0.0012 30.0 6.1 40 13-56 72-112 (197)
23 2y6p_A 3-deoxy-manno-octuloson 43.8 29 0.001 31.1 5.4 42 11-58 71-113 (234)
24 2xwl_A 2-C-methyl-D-erythritol 42.0 58 0.002 28.8 7.1 40 13-56 78-118 (223)
25 1e5k_A Molybdopterin-guanine d 32.4 50 0.0017 29.3 4.9 39 12-55 77-116 (201)
26 3k8d_A 3-deoxy-manno-octuloson 28.6 1.3E+02 0.0046 27.9 7.5 53 13-70 91-144 (264)
27 2c0n_A A197; thermophil protei 28.5 38 0.0013 30.9 3.3 25 28-53 51-78 (203)
28 2yc3_A 2-C-methyl-D-erythritol 27.9 1E+02 0.0034 27.3 6.2 44 12-58 81-125 (228)
29 2wee_A MOBA-related protein; u 25.7 51 0.0017 28.5 3.7 40 13-55 80-120 (197)
30 4fcu_A 3-deoxy-manno-octuloson 25.7 1.1E+02 0.0037 28.4 6.2 53 16-71 77-130 (253)
31 3juk_A UDP-glucose pyrophospho 25.4 69 0.0024 29.7 4.8 43 12-59 106-152 (281)
32 2vsh_A TARI, 2-C-methyl-D-eryt 25.4 76 0.0026 28.2 5.0 45 13-58 85-133 (236)
33 3tqd_A 3-deoxy-manno-octuloson 24.9 1.4E+02 0.0048 27.7 6.8 43 13-58 82-125 (256)
34 2px7_A 2-C-methyl-D-erythritol 24.5 1E+02 0.0034 27.9 5.6 41 13-58 92-133 (236)
35 1ezi_A CMP-N-acetylneuraminic 23.1 1.3E+02 0.0045 26.6 6.1 44 13-58 81-124 (228)
36 3f1c_A Putative 2-C-methyl-D-e 22.2 98 0.0033 28.2 5.1 45 13-58 84-132 (246)
37 4fce_A Bifunctional protein GL 20.2 1.5E+02 0.005 29.4 6.3 43 12-58 83-126 (459)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=100.00 E-value=7.2e-40 Score=366.15 Aligned_cols=354 Identities=20% Similarity=0.289 Sum_probs=278.9
Q ss_pred CCCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhh-cccCCCcEEEEecCcccccCCCc-------c
Q 012538 10 PHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLL-DEKREHEIAFVQHPQRFDNICKN-------D 81 (461)
Q Consensus 10 ~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~-d~~~~~~va~VQ~pq~f~n~~~~-------d 81 (461)
++++|++|+|.|++. +++|||+++|||+++ +||++++++.+|. || +++.||+|+.+.|.++. .
T Consensus 222 ~~~GKa~alN~gl~~----a~gd~Il~lDaD~~~-~pd~L~~lv~~~~~dp----~v~~V~~~~~~~~~~~~~~~~~~~~ 292 (802)
T 4hg6_A 222 NEHAKAGNMSAALER----LKGELVVVFDADHVP-SRDFLARTVGYFVEDP----DLFLVQTPHFFINPDPIQRNLALGD 292 (802)
T ss_dssp CCSHHHHHHHHHHHH----CCCSEEEECCTTEEE-CTTHHHHHHHHHHHSS----SCCEEECCCCBSSCCHHHHHHTCCT
T ss_pred CCCcchHHHHHHHHh----cCCCEEEEECCCCCc-ChHHHHHHHHHHhcCC----CeEEEeccEEEeCCchHhhhhhHHh
Confidence 567999999999998 899999999999999 7999999999995 55 79999999999886521 2
Q ss_pred cchhHHHHHHHHHHHHHhhcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccccccc
Q 012538 82 LYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTH 161 (461)
Q Consensus 82 ~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~ 161 (461)
.+.++...+++..+.+.+.+++++++|+++++||+++++.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~v---------------------------------------- 332 (802)
T 4hg6_A 293 RCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALDEA---------------------------------------- 332 (802)
T ss_dssp TSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHHHH----------------------------------------
T ss_pred hhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHHHHc----------------------------------------
Confidence 2334567788899999999999999999999999999752
Q ss_pred cccccCCCCCCccchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHHHHHHhhhhhcchhHHHHHhhccccccccCccc
Q 012538 162 WGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYGHGKIK 241 (461)
Q Consensus 162 wg~~~G~~~~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G~lqi~~~~~~p~~~~~~~l~ 241 (461)
|||++++++||.+++.+++++||+++|+++ +.+++++|+|+.++++||.||++|.+|+++.+ +|++ .++++
T Consensus 333 ----Ggf~~~~~~ED~~l~~rl~~~G~ri~~~~~--~~~~~~~p~t~~~~~~Qr~RW~~G~~q~l~~~-~pl~--~~~l~ 403 (802)
T 4hg6_A 333 ----GGFAGETITEDAETALEIHSRGWKSLYIDR--AMIAGLQPETFASFIQQRGRWATGMMQMLLLK-NPLF--RRGLG 403 (802)
T ss_dssp ----TTCCCSSSSHHHHHHHHHHTTTCCEEECCC--CCEEECCCCSHHHHHHHHHHHHHHHHHHHHHS-CTTS--CSSCC
T ss_pred ----CCcCCCCcchHHHHHHHHHHcCCeEEEecC--CEEEecCCCCHHHHHHHHHHHHccHHHHHHHh-Cccc--cCCCC
Confidence 899999999999999999999999999976 46789999999999999999999999999876 7876 57899
Q ss_pred ccchhhhhhhhhhhhhHHHHHHHHHHhHHhHhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCccccccchhhh
Q 012538 242 FGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRM 321 (461)
Q Consensus 242 ~~qrl~y~~~~~~~~~~~~~~~~~~~P~l~l~~g~~~~~~~~~~~~l~f~~~~~~~~~~~~l~~~~~G~~~~~ww~~qr~ 321 (461)
+.+|++|+....+++.+++.++++++|+++++++.+++......++..++..++. ..++.....|.....||..
T Consensus 404 ~~~rl~~l~~~~~~~~~~~~li~ll~p~~~ll~~~~~~~~~~~~~~~~~lp~~l~---~~~~~~~~~~~~r~~~~~~--- 477 (802)
T 4hg6_A 404 IAQRLCYLNSMSFWFFPLVRMMFLVAPLIYLFFGIEIFVATFEEVLAYMPGYLAV---SFLVQNALFARQRWPLVSE--- 477 (802)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHCCCCSCCCHHHHHHHHHHHHHH---HHHHHHHHHTTTSCTTHHH---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHH---HHHHHHHHhcCcHHHHHHH---
Confidence 9999999999999999999999999999999999988876433332222211111 1111111223333345543
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccceEEecccccchhhhHHHhhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 012538 322 LIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGFIDIIF 401 (461)
Q Consensus 322 w~i~~~~~~~~~~~~~llk~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~p~~ip~~~l~~l~l~al~~g~~~~~~ 401 (461)
+..+...++.+...+..++++++.+|+||+|+...+.. + .++++.|+.++++++++++++|+++...
T Consensus 478 --l~~~~~~~~~~~a~l~~l~~~~~~~f~VT~Kg~~~~~~---------~--~~~~~~p~~~~~~l~~~~~~~~~~~~~~ 544 (802)
T 4hg6_A 478 --VYEVAQAPYLARAIVTTLLRPRSARFAVTAKDETLSEN---------Y--ISPIYRPLLFTFLLCLSGVLATLVRWVA 544 (802)
T ss_dssp --HHHHHHHHHHHHHHHHHHHSTTCCCCCCCCCCCCCSSC---------C--BCTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHHHhCCCCCcceECCCCcccccc---------c--hhhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 33444445555555666778899999999998754321 1 1366788888999999999999999875
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 012538 402 LDFGALGNLMCQIILCGLMVLVNVPIYEALFIRKDKGCMP 441 (461)
Q Consensus 402 ~~~~~~~~~~~~l~~~~~~v~~~~p~~~~l~~Rk~~~~~P 441 (461)
. ........++++|+.++++.+.+.+.....|+++++.|
T Consensus 545 ~-~~~~~~~~~~~~w~~~~l~~l~~~~~~~~~~~~~R~~~ 583 (802)
T 4hg6_A 545 F-PGDRSVLLVVGGWAVLNVLLVGFALRAVAEKQQRRAAP 583 (802)
T ss_dssp C-GGGHHHHHHHHHHHHHHHHHHHHHHTTTBCCCCSCCCC
T ss_pred c-CCccchhhhhhHHHHHHHHHHHHHHHHHhcCCCccccc
Confidence 3 22345567889999999999999888888887776544
No 2
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.05 E-value=2.1e-10 Score=124.05 Aligned_cols=145 Identities=14% Similarity=0.087 Sum_probs=95.5
Q ss_pred CCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCc-------ccc
Q 012538 11 HNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKN-------DLY 83 (461)
Q Consensus 11 ~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~-------d~~ 83 (461)
.++|++|+|.|++. +++|+|+++|+|+++ +|++|.+++..|.+ ++.+++++..+.+.+.... ..+
T Consensus 159 ~~g~~~a~N~g~~~----a~g~~v~~lD~D~~~-~~~~l~~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 230 (625)
T 2z86_A 159 GYQLCAVRNLGLRA----AKYNYVAILDCDMAP-NPLWVQSYMELLAV---DDNVALIGPRKYIDTSKHTYLDFLSQKSL 230 (625)
T ss_dssp SCCHHHHHHHHHHH----CCSSEEEEECTTEEE-CTTHHHHHHHHHHH---CTTEEEECCEEEECCTTCCHHHHHHSTTG
T ss_pred CcchhHHHHHHHHh----CCcCEEEEECCCCCC-CHHHHHHHHHHHhc---CCceEEEEeeeeccCcccchhhcccchHH
Confidence 35799999999998 789999999999999 79999999999973 2367777765544332210 000
Q ss_pred hhH------HHHHHH------------HHHHHHhh---cCC--ccccccceeEechhhcCCCCCccccccccccCCCCcC
Q 012538 84 ANS------YLVVNQ------------VELAGIGS---YDA--ALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRS 140 (461)
Q Consensus 84 ~~~------~~~f~~------------~~~~g~~~---~~~--~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~ 140 (461)
.+. ...+.. ......+. ... ..++|++.++||+++..+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~i------------------- 291 (625)
T 2z86_A 231 INEIPEIITNNQVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRA------------------- 291 (625)
T ss_dssp GGTSCC---------------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHH-------------------
T ss_pred hhhcchhccCCchhhhhccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHh-------------------
Confidence 000 000000 00000011 111 247899999999999742
Q ss_pred hHHHHHHhchhcccccccccccccccCCCCCCc---cchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHH
Q 012538 141 VDELEKASKVLASCSYEKNTHWGKEMGLVYGCA---AEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLD 209 (461)
Q Consensus 141 ~~~~~~~a~~~~~c~ye~~t~wg~~~G~~~~~v---tED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~ 209 (461)
|||+.... .||.++++|++.+||++.|++.. .+....|.+-.
T Consensus 292 -------------------------Ggfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~--~v~H~~~~~~~ 336 (625)
T 2z86_A 292 -------------------------GWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEGA--MAYHQEPPGKE 336 (625)
T ss_dssp -------------------------CCCCTTCSSCCCHHHHHHHHHHHTTCEEEECGGG--CEEEECCC---
T ss_pred -------------------------CCCccccccCCcchhhhhhhHHhCCceEEEcccc--hhhccCCcccc
Confidence 78887754 59999999999999999999763 34555555443
No 3
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=98.97 E-value=2e-09 Score=101.24 Aligned_cols=127 Identities=12% Similarity=0.026 Sum_probs=83.2
Q ss_pred CCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCc----------
Q 012538 11 HNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKN---------- 80 (461)
Q Consensus 11 ~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~---------- 80 (461)
..++++|.|.|++. ++||||+.+|+|.++ +|++|++++..+.++ +.++ |.+.....+.+..
T Consensus 69 n~G~~~a~N~g~~~----a~g~~i~~lD~Dd~~-~~~~l~~l~~~~~~~--~~~~--v~~~~~~~~~~~~~~~~~~~~~~ 139 (240)
T 3bcv_A 69 NAGLGMACNSGLDV----ATGEYVAFCDSDDYV-DSDMYMTMYNVAQKY--TCDA--VFTGLKRITMAGIPTGTVTHQKE 139 (240)
T ss_dssp CCCHHHHHHHHHHH----CCSSEEEECCTTCCC-CTTHHHHHHHHHHHH--TCSE--EEC--------------------
T ss_pred CCChHHHHHHHHHH----cCCCEEEEECCCCcC-CHHHHHHHHHHHHhc--CCCE--EEEeeEEEccCCccccccccccc
Confidence 46799999999998 889999999999999 899999999999763 2233 3332222211110
Q ss_pred --ccchhHHHHHHHHHHHHHhhcCC---------ccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhc
Q 012538 81 --DLYANSYLVVNQVELAGIGSYDA---------ALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASK 149 (461)
Q Consensus 81 --d~~~~~~~~f~~~~~~g~~~~~~---------~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 149 (461)
..+.. ... .+. -.+..+. ...+|++.++||+++...
T Consensus 140 ~~~~~~~-~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~---------------------------- 186 (240)
T 3bcv_A 140 FKLYKNK-NEI-HTL---LKDLIASDPYAREERAIQVSAKVVLYRRNLIEKK---------------------------- 186 (240)
T ss_dssp CEEECSH-HHH-HHH---HGGGTSSCHHHHHHHHHHHTCSCEEEEHHHHHHT----------------------------
T ss_pred cccccCH-HHH-HHH---HHHHhhcchhhccccccccchhheeeeHHHHHHc----------------------------
Confidence 01111 111 010 0111111 113577889999999743
Q ss_pred hhccccccccccccccc-CCCCC--CccchHHHHHHHHhcCCeEEEeCC
Q 012538 150 VLASCSYEKNTHWGKEM-GLVYG--CAAEDVVTGLTIQCRGWKSMYFKP 195 (461)
Q Consensus 150 ~~~~c~ye~~t~wg~~~-G~~~~--~vtED~~t~~~l~~~Gwrs~y~~~ 195 (461)
| ||+.+ ...||.++.+|+..+|+++.|++.
T Consensus 187 ----------------g~~f~~~~~~~~eD~~~~~r~~~~g~~i~~~~~ 219 (240)
T 3bcv_A 187 ----------------HLRFVSERILPSEDLIFNVDVLANSNIVCVLPQ 219 (240)
T ss_dssp ----------------TCCCCCTTTCTTHHHHHHHHHHTTCSCEEECC-
T ss_pred ----------------CCccCCCCCccCCCHHHHHHHHHhCCEEEEECC
Confidence 5 78866 468999999999999999999975
No 4
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=98.91 E-value=1.6e-09 Score=113.18 Aligned_cols=182 Identities=13% Similarity=0.018 Sum_probs=112.3
Q ss_pred CChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCc------c----
Q 012538 12 NFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKN------D---- 81 (461)
Q Consensus 12 ~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~------d---- 81 (461)
.++++|+|.|++. +.||+|+++|+|..+ +|++|++++..+.+. +.++.+.. ....+.+.. .
T Consensus 100 ~G~~~a~N~g~~~----A~gd~i~flD~D~~~-~p~~L~~ll~~~~~~---~~~~v~~~-~~~~~~~~~~~~~~~~~~~~ 170 (472)
T 1xhb_A 100 SGLIRARLKGAAV----SRGQVITFLDAHCEC-TAGWLEPLLARIKHD---RRTVVCPI-IDVISDDTFEYMAGSDMTYG 170 (472)
T ss_dssp CCHHHHHHHHHHH----CCSSEEEEEESSEEE-CTTCHHHHHHHHHHC---TTEEEEEE-EEEECSSSCCEECCCTTEEE
T ss_pred CChHHHHHHHHHh----ccCCeEEEECCCeEe-CccHHHHHHHHHHhC---CCEEEEee-eeeEcCCCceeccCCCcccc
Confidence 4699999999998 889999999999999 799999999998632 24443311 111111100 0
Q ss_pred cchhH-----HHHHHHHHHHHH-h---hcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhc
Q 012538 82 LYANS-----YLVVNQVELAGI-G---SYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLA 152 (461)
Q Consensus 82 ~~~~~-----~~~f~~~~~~g~-~---~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 152 (461)
.+... ............ + ....+..+|++.++||+++..+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~i------------------------------- 219 (472)
T 1xhb_A 171 GFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEI------------------------------- 219 (472)
T ss_dssp EECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHT-------------------------------
T ss_pred eeeccceeecccCCHHHHhcccCCCCCcccCccccceeEEEEHHHHHHc-------------------------------
Confidence 00000 000000000000 1 2233456788889999999753
Q ss_pred ccccccccccccccCCCCCCc---cchHHHHHHHHhcCCeEEEeCCCCCce---ecccCC----C-----HHHHHHhhhh
Q 012538 153 SCSYEKNTHWGKEMGLVYGCA---AEDVVTGLTIQCRGWKSMYFKPNKPAF---LGVAPV----T-----LDIALVQMKR 217 (461)
Q Consensus 153 ~c~ye~~t~wg~~~G~~~~~v---tED~~t~~~l~~~Gwrs~y~~~~~~~~---~g~~P~----~-----l~~~~~Qr~R 217 (461)
|||+++.. .||+++++|+...|+++.+++... .. ....|. . .....++..|
T Consensus 220 -------------Ggfde~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~-v~H~~~~~~~~~~~~~~~~~~~~n~~r~~~~ 285 (472)
T 1xhb_A 220 -------------GTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSH-VGHVFRKATPYTFPGGTGQIINKNNRRLAEV 285 (472)
T ss_dssp -------------TSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEEE-EEEEC------------CHHHHHHHHHHHHH
T ss_pred -------------CCCCCcccccCchhHHHHHHHHhcCCeEEEccCcE-EEEEccCcCCCCCCcchhhHHHHHHHHHHHH
Confidence 78887754 799999999999999999987431 10 111222 1 4577788889
Q ss_pred hcchhHHHHHhhcccccc----c--cCcccccchhhh
Q 012538 218 WSEGMFQIFLSKYCPFIY----G--HGKIKFGAQMGY 248 (461)
Q Consensus 218 Wa~G~lqi~~~~~~p~~~----~--~~~l~~~qrl~y 248 (461)
|..+..+.++.+ +|-.. | ..++.+++|+..
T Consensus 286 W~d~~~~~~~~~-~p~~~~~~~g~~~~~~~lr~~l~~ 321 (472)
T 1xhb_A 286 WMDEFKNFFYII-SPGVTKVDYGDISSRLGLRRKLQC 321 (472)
T ss_dssp HCGGGGHHHHHT-STTGGGSCCCCCHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhh-CcccccCCCCCHHHHHHHHHhcCC
Confidence 999999988765 45331 1 123455666644
No 5
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=98.82 E-value=3.7e-10 Score=107.39 Aligned_cols=149 Identities=11% Similarity=-0.009 Sum_probs=92.2
Q ss_pred CCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccc--cCCCcccch--hH
Q 012538 11 HNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFD--NICKNDLYA--NS 86 (461)
Q Consensus 11 ~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~--n~~~~d~~~--~~ 86 (461)
..++++|+|.|++. ++||||+.+|+|.++ +|++|++++..+.+ ++++++|.+..... +.+...... ..
T Consensus 73 n~G~~~a~N~gi~~----a~g~~i~~lD~Dd~~-~~~~l~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 144 (255)
T 1qg8_A 73 KTRYAALINQAIEM----AEGEYITYATDDNIY-MPDRLLKMVRELDT---HPEKAVIYSASKTYHLNENRDIVKETVRP 144 (255)
T ss_dssp SCHHHHHHHHHHHH----CCCSEEEEEETTEEE-CTTHHHHHHHHHHH---CTTCCEEEEEEEEEEEC---CEEEEEEEC
T ss_pred ccCHHHHHHHHHHH----cCCCEEEEeCCCCcc-ChHHHHHHHHHHHh---CCCceEEEeceEEEEeCCCCcchhhccCc
Confidence 45799999999998 899999999999999 79999999999873 23567777665544 322111000 00
Q ss_pred HHHHHHHHHHHHhhcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhccccccccccccccc
Q 012538 87 YLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEM 166 (461)
Q Consensus 87 ~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~ 166 (461)
.. ..........+|++.++||+++..+ |
T Consensus 145 ~~--------~~~~~~~~~~~~~~~~~rr~~~~~~--------------------------------------------g 172 (255)
T 1qg8_A 145 AA--------QVTWNAPCAIDHCSVMHRYSVLEKV--------------------------------------------K 172 (255)
T ss_dssp CC--------SCBSCCTTTSCGGGEEEETHHHHHH--------------------------------------------H
T ss_pred hH--------HHHHhhcCCCccceEEEEHHHHHhh--------------------------------------------c
Confidence 00 0001233456789999999999642 3
Q ss_pred -CC------CC-CCccchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHHHHH--Hhhhhhcch
Q 012538 167 -GL------VY-GCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIAL--VQMKRWSEG 221 (461)
Q Consensus 167 -G~------~~-~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~~--~Qr~RWa~G 221 (461)
|| +. ....||.++.+|+..+| +.+|++.. ...+...|.+..... +|+.||.+.
T Consensus 173 ~~f~~~~~~~~~~~~~eD~~~~~r~~~~g-~~~~~~~~-~~~~r~~~~s~s~~~~~~~~~~~~~~ 235 (255)
T 1qg8_A 173 EKFGSYWDESPAFYRIGDARFFWRVNHFY-PFYPLDEE-LDLNYITDQSIHFQLFELEKNEFVRN 235 (255)
T ss_dssp HHHSSSSCCCGGGSTTHHHHHHHHHTTTC-CBEEEEEE-EEEEEEC--------------CTGGG
T ss_pred ccccccccCCcccchHHHHHHHHHHHHhC-CEEEecCc-EEEEEEcCCccchhHHHHHHHHHHHh
Confidence 45 22 25689999999999987 68888754 233455666666554 555555543
No 6
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=98.75 E-value=4e-09 Score=114.04 Aligned_cols=154 Identities=15% Similarity=0.078 Sum_probs=104.8
Q ss_pred CCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchh-HHHH
Q 012538 11 HNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYAN-SYLV 89 (461)
Q Consensus 11 ~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~-~~~~ 89 (461)
..++++|+|.|++. ++||||+++|+|.++ +|++|++++..|.+ ++++++|.+.....+.+....... ....
T Consensus 439 n~G~~~a~n~g~~~----a~g~~i~~ld~D~~~-~~~~l~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 510 (625)
T 2z86_A 439 NKGIGSASNTAVRL----CRGFYIGQLDSDDFL-EPDAVELCLDEFRK---DLSLACVYTTNRNIDREGNLISNGYNWPI 510 (625)
T ss_dssp CCCHHHHHHHHHHH----CCSSEEEECCTTCEE-CTTHHHHHHHHHHH---CTTCSEEEEEEEEECTTSCEEEECCCCSS
T ss_pred CCCHHHHHHHHHHh----cCCCEEEEECCCccc-ChhHHHHHHHHHHh---CCCeeEEEeeeEEECCCCCEeccCccccc
Confidence 45799999999998 889999999999999 89999999988852 235777776655544332211000 0000
Q ss_pred HHHHHHHHHhhcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccccccccccccCCC
Q 012538 90 VNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLV 169 (461)
Q Consensus 90 f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~G~~ 169 (461)
+ ..+.+....++|++.++||+++..+ |||+
T Consensus 511 ~------~~~~~~~~~~~~~~~~~~r~~~~~~--------------------------------------------ggfd 540 (625)
T 2z86_A 511 Y------SREKLTSAMICHHFRMFTARAWNLT--------------------------------------------EGFN 540 (625)
T ss_dssp C------CHHHHTTSCCCCSCEEEEHHHHTTT--------------------------------------------TCCC
T ss_pred C------CHHHHhhcccCCceEEEEHHHHHHh--------------------------------------------CCCC
Confidence 0 0111233467889999999999754 7888
Q ss_pred CC-CccchHHHHHHHHhcCCeEEEeCCCCCcee---cccCCCHHHHHHhhhhhcchhHHH
Q 012538 170 YG-CAAEDVVTGLTIQCRGWKSMYFKPNKPAFL---GVAPVTLDIALVQMKRWSEGMFQI 225 (461)
Q Consensus 170 ~~-~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~---g~~P~~l~~~~~Qr~RWa~G~lqi 225 (461)
.. ...||.++.+|+..+| ++.|+++. .+. .....+......|+.+|.+...+.
T Consensus 541 ~~~~~~eD~dl~~r~~~~g-~~~~~~~~--~~~~r~h~~~~s~~~~~~~~~~~~~~~~~~ 597 (625)
T 2z86_A 541 ESISNAVDYDMYLKLSEVG-PFKHINKI--CYNRVLHGENTSIKKLDIQKENHFKVVNES 597 (625)
T ss_dssp SSCSSCHHHHHHHHHTTTS-CEEEEEEE--EEEEECC----CCSSHHHHHHHHHHHHHHH
T ss_pred CccCChHHHHHHHHHHHhC-CEEEeCCc--EEEEEECCCccchhhHHHHHHHHHHHHHHH
Confidence 76 4689999999999999 88898753 222 334456666777877776544443
No 7
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=98.75 E-value=7.6e-09 Score=109.14 Aligned_cols=181 Identities=7% Similarity=0.002 Sum_probs=110.5
Q ss_pred CChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCc----------c
Q 012538 12 NFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKN----------D 81 (461)
Q Consensus 12 ~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~----------d 81 (461)
.++++|+|.|++. +.||+|+++|+|..+ +|++|++++..+.+.. . ++|.......+.+.. .
T Consensus 132 ~G~~~A~N~G~~~----A~gd~i~flD~D~~~-~p~~L~~ll~~~~~~~---~-~vv~~~~~~~~~~~~~~~~~~~~~~~ 202 (501)
T 2ffu_A 132 EGLMRSRVRGADA----AQAKVLTFLDSHCEC-NEHWLEPLLERVAEDR---T-RVVSPIIDVINMDNFQYVGASADLKG 202 (501)
T ss_dssp CHHHHHHHHHHHH----CCSSEEEECCSSEEE-CTTCHHHHHHHHHHCT---T-EEEEEEEEEECTTTCCEECBCSSEEE
T ss_pred cCHHHHHHHHHHh----cCCCEEEEECCCccc-CccHHHHHHHHHHhCC---C-eEEEeeeccCcCCCceeecCCcccce
Confidence 4699999999998 889999999999999 7999999999987531 2 334321111111100 0
Q ss_pred cchhHH-----HHHHHHHHHHH-h---hcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhc
Q 012538 82 LYANSY-----LVVNQVELAGI-G---SYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLA 152 (461)
Q Consensus 82 ~~~~~~-----~~f~~~~~~g~-~---~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 152 (461)
.+.... ........... + ....+...|++.++||+++..+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~i------------------------------- 251 (501)
T 2ffu_A 203 GFDWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEEL------------------------------- 251 (501)
T ss_dssp EECTTCCEEEEECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHHT-------------------------------
T ss_pred EeeecCCCccccCCHHHHhhccCCCCCcccCccccceEEEEEHHHHHHh-------------------------------
Confidence 000000 00000000010 1 1223456788899999999753
Q ss_pred ccccccccccccccCCCCCCc---cchHHHHHHHHhcCCeEEEeCCCCCceecc----c----CCC-----HHHHHHhhh
Q 012538 153 SCSYEKNTHWGKEMGLVYGCA---AEDVVTGLTIQCRGWKSMYFKPNKPAFLGV----A----PVT-----LDIALVQMK 216 (461)
Q Consensus 153 ~c~ye~~t~wg~~~G~~~~~v---tED~~t~~~l~~~Gwrs~y~~~~~~~~~g~----~----P~~-----l~~~~~Qr~ 216 (461)
|||+.+.. .||+++++|+...|+++.|++.. .+.-. . |.. .....+...
T Consensus 252 -------------Ggfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~--~v~H~~r~~~~~~~~~~~~~~~~~n~~r~~~ 316 (501)
T 2ffu_A 252 -------------GKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCS--RVGHVFRKQHPYTFPGGSGTVFARNTRRAAE 316 (501)
T ss_dssp -------------TCCCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEE--EEEECCCSSCCSCCTTCHHHHHHHHHHHHHH
T ss_pred -------------CCCCccccccCcchHHHHHHHHhcCCeEEEccCc--EEEEEccCcCCCcCCccchhHHHHHHHHHHH
Confidence 77887643 89999999999999999998742 11111 1 221 244556667
Q ss_pred hhcchhHHHHHhhccccccc------cCcccccchhhh
Q 012538 217 RWSEGMFQIFLSKYCPFIYG------HGKIKFGAQMGY 248 (461)
Q Consensus 217 RWa~G~lqi~~~~~~p~~~~------~~~l~~~qrl~y 248 (461)
+|..+..+.++.+ .|.... ..++.+++|+..
T Consensus 317 ~w~d~~~~~~y~~-~p~~~~~~~g~~~~r~~lr~~l~c 353 (501)
T 2ffu_A 317 VWMDEYKNFYYAA-VPSARNVPYGNIQSRLELRKKLSC 353 (501)
T ss_dssp HHCGGGHHHHHHH-CGGGGGCCCCCCHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhhc-CcccccCCccchHHHHHHHHhcCC
Confidence 7888877776665 565421 123445666653
No 8
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=98.74 E-value=1.7e-08 Score=108.40 Aligned_cols=167 Identities=11% Similarity=-0.005 Sum_probs=107.7
Q ss_pred CCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCc----------
Q 012538 11 HNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKN---------- 80 (461)
Q Consensus 11 ~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~---------- 80 (461)
..++++|.|.|++. +.+|||+++|+|..+ +|++|++++..+.+. ++++ |.....+.+.+..
T Consensus 181 n~G~~~A~N~G~~~----A~gd~i~fLD~D~~~-~p~~L~~ll~~l~~~---~~~v-v~~~i~~~~~~~~~~~~~~~~~~ 251 (570)
T 2d7i_A 181 REGLIRTRMLGASV----ATGDVITFLDSHCEA-NVNWLPPLLDRIARN---RKTI-VCPMIDVIDHDDFRYETQAGDAM 251 (570)
T ss_dssp CCCHHHHHHHHHHH----CCSSEEEECCSSEEE-CTTCSHHHHHHHHHC---TTEE-EEEEEEEECTTTCCEECCTTSSC
T ss_pred CCCHHHHHHHHHHh----cCCCEEEEEcCCccc-cccHHHHHHHHHHhC---CCEE-EeeeeeccCCCchhhccccCCcc
Confidence 35799999999998 789999999999999 799999999998753 2333 3221111111100
Q ss_pred -ccchhHHHHHHHHHH--------HHHhhcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchh
Q 012538 81 -DLYANSYLVVNQVEL--------AGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVL 151 (461)
Q Consensus 81 -d~~~~~~~~f~~~~~--------~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 151 (461)
..+.. ..++.... ........+..+|++.++||+++..+
T Consensus 252 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~i------------------------------ 299 (570)
T 2d7i_A 252 RGAFDW--EMYYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWEL------------------------------ 299 (570)
T ss_dssp EEEECT--TCCEEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHHT------------------------------
T ss_pred cccccc--cccccccccchhhhccCCCcceecccccceEEEEEHHHHHhc------------------------------
Confidence 00000 00000000 00011223456789999999999753
Q ss_pred cccccccccccccccCCCCCCc---cchHHHHHHHHhcCCeEEEeCCCCCc--eecccCC-------CHHHHHHhhhhhc
Q 012538 152 ASCSYEKNTHWGKEMGLVYGCA---AEDVVTGLTIQCRGWKSMYFKPNKPA--FLGVAPV-------TLDIALVQMKRWS 219 (461)
Q Consensus 152 ~~c~ye~~t~wg~~~G~~~~~v---tED~~t~~~l~~~Gwrs~y~~~~~~~--~~g~~P~-------~l~~~~~Qr~RWa 219 (461)
|||+.+.. .||+++++|+...||+++|++..... +.+..|. ......+...||.
T Consensus 300 --------------GgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~r~~~~~~~~~~~~~~~n~~r~~~~W~ 365 (570)
T 2d7i_A 300 --------------GGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAGVSLARNLKRVAEVWM 365 (570)
T ss_dssp --------------TSSCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECCCSSCCSCCCSSCCHHHHHHHHHHHHC
T ss_pred --------------CCCCCcccccCcchHHHHHHHHhCCCeEEEccCeEEEEEccccCCCCCCchhhhHHHHHHHHHHHH
Confidence 78887653 69999999999999999998753110 1122331 1466777788999
Q ss_pred chhHHHHHhhcccc
Q 012538 220 EGMFQIFLSKYCPF 233 (461)
Q Consensus 220 ~G~lqi~~~~~~p~ 233 (461)
...-+.+..+ +|-
T Consensus 366 d~~~~~~y~~-~p~ 378 (570)
T 2d7i_A 366 DEYAEYIYQR-RPE 378 (570)
T ss_dssp GGGHHHHHTT-CGG
T ss_pred HHHHHHHHhc-Ccc
Confidence 9999888765 453
No 9
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=98.63 E-value=2.7e-08 Score=97.98 Aligned_cols=135 Identities=13% Similarity=0.035 Sum_probs=89.7
Q ss_pred ChHHHHHHHH----HhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchhHHH
Q 012538 13 FKAGAMNALI----RVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYL 88 (461)
Q Consensus 13 ~KAGaLN~~l----~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~ 88 (461)
.||.++|.|+ +. +++|||+.+|+|.++ +|+... +... ..|..+. . ..+.+.
T Consensus 112 ~~a~a~N~G~~~al~~----A~gd~i~flD~D~i~-~~d~~~----~~~~----------~~p~~~~-~-~~~~~~---- 166 (287)
T 2fy7_A 112 NRAKLLNVGFQEALKD----YDYTCFVFSDVDLIP-MNDHNA----YRCF----------SQPRHIS-V-AMDKFG---- 166 (287)
T ss_dssp CHHHHHHHHHHHHHHH----SCCCEEEEECTTEEE-SBTTSC----CSCC----------SSCEECC-C-EEGGGT----
T ss_pred chhhhhhhHHHHHHHh----CCCCEEEEECCCccc-CCCcce----EecC----------CCCceEE-E-eecccc----
Confidence 4899999999 65 889999999999999 788521 1100 0111110 0 000000
Q ss_pred HHHHHHHHHHhhcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccccccccccccCC
Q 012538 89 VVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGL 168 (461)
Q Consensus 89 ~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~G~ 168 (461)
+ ......+.|.+.++||+++..+ |||
T Consensus 167 --~--------~~~~~~~~G~~~~~rr~~f~~v--------------------------------------------gGF 192 (287)
T 2fy7_A 167 --F--------SLPYVQYFGGVSALSKQQFLTI--------------------------------------------NGF 192 (287)
T ss_dssp --T--------SCSSTTCCCSEEEEEHHHHHHT--------------------------------------------TSC
T ss_pred --c--------CCCcCceeeeEEEEEHHHHHHc--------------------------------------------CCC
Confidence 0 0011235688889999999754 788
Q ss_pred CCCCc---cchHHHHHHHHhcCCeEEEeCCCCCce----------ecccCCCHHHHHHhhhhhcchhHHHH
Q 012538 169 VYGCA---AEDVVTGLTIQCRGWKSMYFKPNKPAF----------LGVAPVTLDIALVQMKRWSEGMFQIF 226 (461)
Q Consensus 169 ~~~~v---tED~~t~~~l~~~Gwrs~y~~~~~~~~----------~g~~P~~l~~~~~Qr~RWa~G~lqi~ 226 (461)
+..-. .||.++..|++.+|+++.+.++....+ ....|+.+..+.+||.||+++.++.+
T Consensus 193 de~~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i~H~~~~~~~~n~~~~~~l~~~~~~~~~~Gl~~~ 263 (287)
T 2fy7_A 193 PNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSRDKKNEPNPQRFDRIAHTKETMLSDGLNSL 263 (287)
T ss_dssp CSCCSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEECC---------CCCCCCCHHHHHHHTTTSSGGGC
T ss_pred CccccccccchHHHHHHHHHcCCeEEecCcccceeEEEecCCCcccCCCHHHHHHHhhcccEEcCCCcccC
Confidence 87644 599999999999999887443211111 23578999999999999999988654
No 10
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=98.48 E-value=2.6e-07 Score=92.17 Aligned_cols=53 Identities=17% Similarity=0.156 Sum_probs=44.4
Q ss_pred CCCChHHHHHHHHHhccccCCCCEEEEeCCCCC-cCchHHHHHHHHHhh-cccCCCcEEEEecC
Q 012538 10 PHNFKAGAMNALIRVSSVISNGPVILNLDCDMY-ANDGDAIREALCFLL-DEKREHEIAFVQHP 71 (461)
Q Consensus 10 ~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~-~~~p~~l~~~~~~f~-d~~~~~~va~VQ~p 71 (461)
...+|++|+|.|++. ++||||+.+|+|.+ + +|++|.+++..+. +| ++++|++.
T Consensus 115 ~n~G~~~a~n~g~~~----a~gd~i~~lD~D~~~~-~p~~l~~l~~~l~~~~----~~~~v~g~ 169 (329)
T 3ckj_A 115 IRPGKGEALWRSLAA----SRGDIVVFVDSDLINP-HPMFVPWLVGPLLTGD----GVHLVKSF 169 (329)
T ss_dssp CCCSHHHHHHHHHHH----CCCSEEEECCTTEESC-CTTHHHHHHHHHHSCS----SCCEEEEE
T ss_pred CCCCHHHHHHHHHHh----CCCCEEEEECCCCCCc-ChHHHHHHHHHHHhCC----CccEEEEE
Confidence 346799999999998 88999999999999 8 7999999998864 44 56667654
No 11
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=98.33 E-value=5.5e-07 Score=98.30 Aligned_cols=158 Identities=13% Similarity=0.031 Sum_probs=95.4
Q ss_pred CCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCC-----c---c-
Q 012538 11 HNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICK-----N---D- 81 (461)
Q Consensus 11 ~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~-----~---d- 81 (461)
..+.|+|.|.|++.+....++|||+.+|+|.++ +|++|.+++.++.+. ++++.|+......+... . +
T Consensus 249 N~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~-~pd~L~~ll~~l~~~---~~~~~vg~~il~~~~~~~~~~~g~~~~~ 324 (657)
T 4fix_A 249 NLGGSGGYSRVMYEALKNTDCQQILFMDDDIRL-EPDSILRVLAMHRFA---KAPMLVGGQMLNLQEPSHLHIMGEVVDR 324 (657)
T ss_dssp CCHHHHHHHHHHHHHHHHCCCSEEEEECSSEEE-CTHHHHHHHHHHHHB---SSCCEEEEEEEETTSTTEECCSCEEEET
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEEECCCCcc-ChhHHHHHHHHHHhC---CCcEEEEeEEecCCCCceeeecccEecc
Confidence 457899999999984312268999999999999 799999999998743 24444442211111100 0 0
Q ss_pred ---cchhHHHH-----H----HH---HHHHHHhh-cCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHH
Q 012538 82 ---LYANSYLV-----V----NQ---VELAGIGS-YDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELE 145 (461)
Q Consensus 82 ---~~~~~~~~-----f----~~---~~~~g~~~-~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (461)
.+...... | .. ......+. .......|+++++||+++..+
T Consensus 325 ~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~v------------------------ 380 (657)
T 4fix_A 325 SIFMWTAAPHAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEEL------------------------ 380 (657)
T ss_dssp TTTEEEECTTCCSCEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHH------------------------
T ss_pred ccccccccccccccccccccccccccccccccccceeccccchhHhHhhHHHHHHh------------------------
Confidence 00000000 0 00 00111111 223456788999999999642
Q ss_pred HHhchhcccccccccccccccCCCCC-CccchHHHHHHHHhcCCeEEEeCCCCCceeccc----C--CCHHHHHHhhhhh
Q 012538 146 KASKVLASCSYEKNTHWGKEMGLVYG-CAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVA----P--VTLDIALVQMKRW 218 (461)
Q Consensus 146 ~~a~~~~~c~ye~~t~wg~~~G~~~~-~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~----P--~~l~~~~~Qr~RW 218 (461)
||++.. .-.||++.++|+..+||+++|++.. .++-.. + ..+..+...|.|+
T Consensus 381 --------------------Ggfd~~F~~~ED~Dl~lR~~~~G~ki~~~p~a--~V~H~~~~~~~~~s~~r~Yy~~RN~l 438 (657)
T 4fix_A 381 --------------------GQPLPLFIKWDDADYGLRAAEHGYPTVTLPGA--AIWHMAWSDKDDAIDWQAYFHLRNRL 438 (657)
T ss_dssp --------------------CSCCSCSSSSHHHHHHHHHHHTTCCEEEEEEE--EEEECCSSSSCCTTSTHHHHHHHHHH
T ss_pred --------------------CCChhHhccCcHHHHHHHHHHcCCeEEEECCE--EEEEcCcCccccccHHHHHHHHHHHH
Confidence 566522 3359999999999999999999753 333211 1 1267777777765
No 12
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=98.17 E-value=2.2e-07 Score=102.49 Aligned_cols=128 Identities=13% Similarity=-0.032 Sum_probs=0.0
Q ss_pred CCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchhHHHHH
Q 012538 11 HNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVV 90 (461)
Q Consensus 11 ~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f 90 (461)
..++++|.|.|++. ++||||+.+|+|.++ .|++|++++..+.++ ++..... ..+. .+.. .+.......
T Consensus 68 n~G~~~arN~gi~~----A~gdyI~flD~Dd~~-~p~~l~~l~~~l~~~----d~v~~~~-~~~~-~~~~-~~~~~~~~~ 135 (729)
T 3l7i_A 68 NSGHAHARNIALEE----VETPYFMFLDADDEL-ASYAITFYLEKFNNT----DGLIAPI-HSFT-TQRP-QFVDLDRVR 135 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCHHHHHHHHHHh----ccCCEEEEECCCCCC-ChhHHHHHHHHhcCC----CEEEEee-EEee-cCCC-cccccccee
Confidence 45799999999997 889999999999999 899999999998743 3332222 1111 1111 111000000
Q ss_pred HHHHHHHHhhcCCc--cccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhccccccccccccccc-C
Q 012538 91 NQVELAGIGSYDAA--LYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEM-G 167 (461)
Q Consensus 91 ~~~~~~g~~~~~~~--~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~-G 167 (461)
... ....+..... ...|.+.++||+++... | |
T Consensus 136 ~~~-~~~~~~~~~~~~~~~~~~~~~rr~~l~~~--------------------------------------------gl~ 170 (729)
T 3l7i_A 136 VEY-FNAKENINSFLRKQSACNIIFRTAIVRAH--------------------------------------------HIR 170 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eee-ecchhhHHHHhhccchhheeeeHHHHHHc--------------------------------------------CCC
Confidence 000 0011111111 23566789999999753 4 6
Q ss_pred CCCC-CccchHHHHHHHHhcCCeEEEeCC
Q 012538 168 LVYG-CAAEDVVTGLTIQCRGWKSMYFKP 195 (461)
Q Consensus 168 ~~~~-~vtED~~t~~~l~~~Gwrs~y~~~ 195 (461)
|+.+ ...||.+..+|+..+|++++|+++
T Consensus 171 fde~~~~~ED~d~~~rl~~~g~~i~~~~~ 199 (729)
T 3l7i_A 171 FNENLNTYVDWSFVLEYMKYVNKFVRIFN 199 (729)
T ss_dssp -----------------------------
T ss_pred cCCCCCcccCHHHHHHHHHhcCCEEEecC
Confidence 8776 479999999999999999999943
No 13
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=98.05 E-value=9.8e-06 Score=77.39 Aligned_cols=52 Identities=4% Similarity=-0.035 Sum_probs=42.1
Q ss_pred CChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcc-cCCCcEEEE
Q 012538 12 NFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDE-KREHEIAFV 68 (461)
Q Consensus 12 ~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~-~~~~~va~V 68 (461)
.+.|.|.|.|++. ++|||++.+|+|.++ +|++|++++.++.+. ..+++++.|
T Consensus 60 ~g~a~a~N~Gi~~----A~g~yl~fln~D~~~-~~~~l~~l~~~~~~~~~~~~~vg~v 112 (249)
T 2nxv_A 60 FHGFSWHKQMLPR----CKGRYVIFCHEDVEL-VDRGYDDLVAAIEALEEADPKWLVA 112 (249)
T ss_dssp CCTTTHHHHHGGG----CCSSEEEEEETTEEC-SSCCHHHHHHHHHHHHHHCTTEEEE
T ss_pred ccHHHHHHHHHHh----cCCCEEEEECCCccc-CccHHHHHHHHHHhcccCCCCeeEE
Confidence 4568999999997 889999999999999 799999999988641 002367765
No 14
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=97.71 E-value=0.00014 Score=74.24 Aligned_cols=51 Identities=24% Similarity=0.246 Sum_probs=42.8
Q ss_pred CCChHHHHHHHHHhccccCCCCEEEEeCCCCC-cCchHHHHHHHHHhh-cccCCCcEEEEec
Q 012538 11 HNFKAGAMNALIRVSSVISNGPVILNLDCDMY-ANDGDAIREALCFLL-DEKREHEIAFVQH 70 (461)
Q Consensus 11 ~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~-~~~p~~l~~~~~~f~-d~~~~~~va~VQ~ 70 (461)
..+|++|+|.|++. ++||||+.+|||.. + +|++|.+++..+. +| ++++|..
T Consensus 164 n~G~g~A~n~G~~~----A~gd~i~~lDaD~~~~-~p~~L~~l~~~l~~~p----~~d~v~G 216 (387)
T 3f1y_A 164 AHGKGDAMWRALSV----TRGDLVLYIDADTRDF-RPQLAYGVLGPVLEVP----GVRFVKA 216 (387)
T ss_dssp CCSHHHHHHHHTTT----CCSSEEEECCTTCSSC-CTHHHHTTHHHHHHST----TCCEEEE
T ss_pred cCCHHHHHHHHHHh----cCCCEEEEEcCCCCcC-CHHHHHHHHHHHHHCC----CceEEEE
Confidence 45799999999997 78999999999999 8 7999999998885 33 4555543
No 15
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=96.18 E-value=0.029 Score=57.33 Aligned_cols=42 Identities=21% Similarity=0.036 Sum_probs=36.6
Q ss_pred CCChHHHHHHHH----HhccccCCCCEEEEeCCCCC-cCchHHHHHHHHHhh
Q 012538 11 HNFKAGAMNALI----RVSSVISNGPVILNLDCDMY-ANDGDAIREALCFLL 57 (461)
Q Consensus 11 ~~~KAGaLN~~l----~~~~~~s~~~~il~lDaD~~-~~~p~~l~~~~~~f~ 57 (461)
..||++|+|+|+ +. ++||+|+++|||.. . +|+.+.+++..+.
T Consensus 73 n~GkG~Al~~G~~~Al~~----a~gd~vv~mDADlq~~-~P~~i~~Ll~~l~ 119 (397)
T 2bo4_A 73 RPGKGDGMNTALRYFLEE----TQWERIHFYDADITSF-GPDWITKAEEAAD 119 (397)
T ss_dssp SSSHHHHHHHHHHHHHHH----CCCSEEEECCTTCSSC-CHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHh----CCCCEEEEEcCCCCCC-CHHHHHHHHHHHH
Confidence 468999999999 65 78999999999996 6 6999999887764
No 16
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=84.80 E-value=1.5 Score=42.40 Aligned_cols=139 Identities=16% Similarity=0.055 Sum_probs=83.1
Q ss_pred CCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCcccchhHHHHH
Q 012538 11 HNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVV 90 (461)
Q Consensus 11 ~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f 90 (461)
.--||..||.|...+. .+.|+++.-|.|.+| ..|... |-.++. ..|.... .++.. +
T Consensus 96 ~FNRa~LlNvGf~ea~--~~~d~~ifHDVDLlP-~dd~n~----Y~c~~~--------~~P~Hls-~~~~~-~------- 151 (287)
T 3lw6_A 96 RFNRASLINVGFQFAS--DVYDYIAMHDVDLLP-LNDNLL----YEYPSS--------LGPLHIA-GPKLH-P------- 151 (287)
T ss_dssp CCCHHHHHHHHHHHSC--TTCCEEEEECTTEEE-CCTTSC----CCCCCT--------TCCEESS-CTTTC-S-------
T ss_pred ccchhheecccHHHHh--ccCCEEEEecccccc-cCCCcc----ccCCCC--------CCceEEe-ecccc-C-------
Confidence 3459999999998742 568999999999999 433111 111100 0122111 11110 0
Q ss_pred HHHHHHHHhhcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccccccccccccCCCC
Q 012538 91 NQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVY 170 (461)
Q Consensus 91 ~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~~~G~~~ 170 (461)
.+....+.|....++|+.+..+ +||+.
T Consensus 152 ---------~~~Y~~~~GGv~a~~re~f~kV--------------------------------------------NGFsn 178 (287)
T 3lw6_A 152 ---------KYHYDNFVGGILLVRREHFKQM--------------------------------------------NGMSN 178 (287)
T ss_dssp ---------SCCCTTCCCSEEEEEHHHHHHT--------------------------------------------TSCCS
T ss_pred ---------CCCcCCccccEEeccHHHHHHc--------------------------------------------CCCCC
Confidence 0112335677778888887543 44443
Q ss_pred CCc---cchHHHHHHHHhcCCeEEEeCCC---C-Ccee---------cccCCCHHHHHHhhhhhcchhHHHH
Q 012538 171 GCA---AEDVVTGLTIQCRGWKSMYFKPN---K-PAFL---------GVAPVTLDIALVQMKRWSEGMFQIF 226 (461)
Q Consensus 171 ~~v---tED~~t~~~l~~~Gwrs~y~~~~---~-~~~~---------g~~P~~l~~~~~Qr~RWa~G~lqi~ 226 (461)
.-. -||.+...|+...|.++...+.. + ..+. ...|......-.+++||..+.+..+
T Consensus 179 ~f~GWGgEDdD~~~Rl~~~G~~i~Rp~~~~~gry~m~~H~hd~~~r~rd~~k~~~~~~~~~~r~~~dGLnsl 250 (287)
T 3lw6_A 179 QYWGWGLEDDEFFVRIRDAGLQVTRPQNIKTGTNDTFSHIHNRYHRKRDTQKCFNQKEMTRKRDHKTGLDNV 250 (287)
T ss_dssp CCCSSSSHHHHHHHHHHHTTCCCBCCSSCCCCTTTSEEECCCTTTSCCCCCCCTTHHHHHTSCCSSCSGGGC
T ss_pred cCcCCCccchHHHHHHHHcCCcEEcCCCccccceeEEeccccccccCCcccchhhhhhhhcEEccCCCCeee
Confidence 322 69999999999999987654321 0 1121 1234566677889999998888654
No 17
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=75.49 E-value=3.4 Score=41.06 Aligned_cols=46 Identities=15% Similarity=0.148 Sum_probs=33.3
Q ss_pred HHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHH---HHHHHhhcccCCCcEEEEe
Q 012538 16 GAMNALIRVSSVISNGPVILNLDCDMYANDGDAIR---EALCFLLDEKREHEIAFVQ 69 (461)
Q Consensus 16 GaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~---~~~~~f~d~~~~~~va~VQ 69 (461)
.++|.+++. .++|+++++|-|+++ .|||++ +++..+.+ ++++..|.
T Consensus 89 ~al~~vf~~----~~~~~vIiLEDDl~~-spdF~~y~~~~l~~y~~---D~~I~~IS 137 (343)
T 1fo8_A 89 WALGQIFHN----FNYPAAVVVEDDLEV-APDFFEYFQATYPLLKA---DPSLWCVS 137 (343)
T ss_dssp HHHHHHHTT----SCCSEEEEEETTEEE-CTTHHHHHHHHHHHHHH---CTTEEEEE
T ss_pred HHHHHHHHh----ccCCEEEEEcCCCeE-CHHHHHHHHHHHHHhhc---CCcEEEEe
Confidence 356666654 579999999999999 899994 44455542 34777774
No 18
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=71.43 E-value=3.5 Score=41.72 Aligned_cols=40 Identities=18% Similarity=0.087 Sum_probs=31.6
Q ss_pred CChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHH
Q 012538 12 NFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALC 54 (461)
Q Consensus 12 ~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~ 54 (461)
+||..|+-.++.++. ..++|+|+++|||-+ .|.++.+.+.
T Consensus 143 ~GKG~Am~aGl~~A~-~~~gd~Vv~~DaDl~--iP~~v~~~~k 182 (394)
T 2zu9_A 143 SGKGEGMLVGLLLAK-AIGAEYVGFVDADNY--IPGAVNEYVK 182 (394)
T ss_dssp CSHHHHHHHHHHHHH-HTTCSEEEECCSCBS--CHHHHHHHHH
T ss_pred CChHHHHHHHHHHHh-hCCCCEEEEEeCCCC--CHHHHHHHHH
Confidence 499999999999821 018999999999995 4888866553
No 19
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=60.37 E-value=9.7 Score=38.13 Aligned_cols=40 Identities=20% Similarity=0.159 Sum_probs=30.6
Q ss_pred CCCCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHH
Q 012538 9 CPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIR 50 (461)
Q Consensus 9 ~~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~ 50 (461)
..+.+|++++=.|+..+. ...++||..+|||.++ +.+..+
T Consensus 139 ~vR~GKGegmi~Gi~~Ak-~~~geYVgFvDADdyi-~~~v~E 178 (391)
T 2wvl_A 139 LVRSGKAEGMILALVFAA-LSGRRYVGFIDADNYF-PGAVWE 178 (391)
T ss_dssp SBCCSHHHHHHHHHHHHH-HTTCSEEEECCSCBSC-HHHHHH
T ss_pred cccccchHHHHHHHHHHH-hcCCCEEEEEcCcCCC-ccCHHH
Confidence 345789999999998731 2379999999999999 344433
No 20
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=57.91 E-value=18 Score=34.44 Aligned_cols=30 Identities=20% Similarity=0.182 Sum_probs=24.5
Q ss_pred CCCCEEEEeCCCCCcCchHHHHHHHHHhhccc
Q 012538 29 SNGPVILNLDCDMYANDGDAIREALCFLLDEK 60 (461)
Q Consensus 29 s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~ 60 (461)
.+.+.++..|.|+++ +.+-|.+.+..+ ||.
T Consensus 92 ~~~~Wf~~~DDDtyv-~~~nL~~~L~~~-d~~ 121 (280)
T 2j0a_A 92 SGLRWFCHVDDDNYV-NPKALLQLLKTF-PQD 121 (280)
T ss_dssp HTCSEEEEEETTEEE-CHHHHHHHHTTS-CTT
T ss_pred CCCcEEEEeCCCcEE-cHHHHHHHHHhC-CCC
Confidence 689999999999999 688888877555 553
No 21
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=54.00 E-value=27 Score=32.20 Aligned_cols=45 Identities=16% Similarity=0.111 Sum_probs=31.8
Q ss_pred hHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhc
Q 012538 14 KAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLD 58 (461)
Q Consensus 14 KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d 58 (461)
...++-+||+......+.|+++++|||+=.-.++.+++++..+.+
T Consensus 83 r~~sv~~gl~~~~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~ 127 (231)
T 3q80_A 83 RTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRD 127 (231)
T ss_dssp HHHHHHHHHGGGC---CCSEEEECCTTCTTCCHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHhhhcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhh
Confidence 356777788863211126899999999644379999999988764
No 22
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=44.88 E-value=36 Score=30.03 Aligned_cols=40 Identities=10% Similarity=0.103 Sum_probs=31.6
Q ss_pred ChHHHHHHHHHhccccCCCCEEEEeCCCC-CcCchHHHHHHHHHh
Q 012538 13 FKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFL 56 (461)
Q Consensus 13 ~KAGaLN~~l~~~~~~s~~~~il~lDaD~-~~~~p~~l~~~~~~f 56 (461)
+-++++..|++.. .+.|.+++++||+ .+ +++.+++++..+
T Consensus 72 G~~~si~~al~~~---~~~~~vlv~~~D~P~i-~~~~i~~l~~~~ 112 (197)
T 3d5n_A 72 GISTSLKLGLRFF---KDYDAVLVALGDMPFV-TKEDVNKIINTF 112 (197)
T ss_dssp CHHHHHHHHHHHT---TTSSEEEEEETTCCCS-CHHHHHHHHHTC
T ss_pred CHHHHHHHHHHhh---ccCCcEEEEeCCcccc-CHHHHHHHHHHh
Confidence 4578888888872 2348999999999 56 689999988766
No 23
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=43.82 E-value=29 Score=31.13 Aligned_cols=42 Identities=14% Similarity=0.132 Sum_probs=32.5
Q ss_pred CCChHHHHHHHHHhccccCCCCEEEEeCCCC-CcCchHHHHHHHHHhhc
Q 012538 11 HNFKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFLLD 58 (461)
Q Consensus 11 ~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~-~~~~p~~l~~~~~~f~d 58 (461)
..+.+++++ +++. .+.|.+++++||+ .. +++.+++++..+.+
T Consensus 71 ~~g~~~~~~-~~~~----~~~~~vlv~~~D~P~~-~~~~i~~l~~~~~~ 113 (234)
T 2y6p_A 71 PSGSDRVLY-VVRD----LDVDLIINYQGDEPFV-YEEDIKLIFRELEK 113 (234)
T ss_dssp CSHHHHHHH-HHTT----CCCSEEEECCTTCCCC-CHHHHHHHHHHHHH
T ss_pred ccchHHHHH-HHHh----CCCCEEEEecCCcCcC-CHHHHHHHHHHHHh
Confidence 456777774 5554 4678999999999 88 68999999987764
No 24
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=41.97 E-value=58 Score=28.76 Aligned_cols=40 Identities=10% Similarity=0.135 Sum_probs=32.3
Q ss_pred ChHHHHHHHHHhccccCCCCEEEEeCCCC-CcCchHHHHHHHHHh
Q 012538 13 FKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFL 56 (461)
Q Consensus 13 ~KAGaLN~~l~~~~~~s~~~~il~lDaD~-~~~~p~~l~~~~~~f 56 (461)
..++++..|++.. .+.|.+++++||+ .+ +++.+++++..+
T Consensus 78 ~~~~~i~~al~~~---~~~~~vlv~~~D~P~~-~~~~i~~l~~~~ 118 (223)
T 2xwl_A 78 DRTESVALALEAA---GDAEFVLVHDAARALT-PPALIARVVAAL 118 (223)
T ss_dssp SHHHHHHHHHTTC---TTCSEEEECCTTCTTC-CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhc---CCCCEEEEEcCCcccC-CHHHHHHHHHHH
Confidence 3678888898862 2578999999999 56 688999998877
No 25
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=32.42 E-value=50 Score=29.27 Aligned_cols=39 Identities=18% Similarity=0.152 Sum_probs=32.0
Q ss_pred CChHHHHHHHHHhccccCCCCEEEEeCCCC-CcCchHHHHHHHHH
Q 012538 12 NFKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCF 55 (461)
Q Consensus 12 ~~KAGaLN~~l~~~~~~s~~~~il~lDaD~-~~~~p~~l~~~~~~ 55 (461)
.+-++++-.|++. .+.|.+++++||+ .+ +++.+++++..
T Consensus 77 ~G~~~si~~~l~~----~~~~~vlv~~~D~P~i-~~~~i~~l~~~ 116 (201)
T 1e5k_A 77 PGPLAGMLSVMQQ----EAGEWFLFCPCDTPYI-PPDLAARLNHQ 116 (201)
T ss_dssp CSHHHHHHHHHHH----CCSSEEEEEETTCTTC-CTTHHHHHHHT
T ss_pred CCHHHHHHHHHHh----CCCCcEEEEeCCcCcC-CHHHHHHHHhh
Confidence 3678889999987 4579999999999 56 68888888765
No 26
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=28.60 E-value=1.3e+02 Score=27.93 Aligned_cols=53 Identities=17% Similarity=0.187 Sum_probs=35.8
Q ss_pred ChHHHHHHHHHhccccCCCCEEEEeCCCC-CcCchHHHHHHHHHhhcccCCCcEEEEec
Q 012538 13 FKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFLLDEKREHEIAFVQH 70 (461)
Q Consensus 13 ~KAGaLN~~l~~~~~~s~~~~il~lDaD~-~~~~p~~l~~~~~~f~d~~~~~~va~VQ~ 70 (461)
+.++ +..+++... ..+.|.++++|||+ .+ +++.+++++..+.++ +.+++.+-.
T Consensus 91 Gt~~-i~~~~~~l~-~~~~d~vlv~~gD~Pli-~~~~i~~li~~~~~~--~~~~~~~~~ 144 (264)
T 3k8d_A 91 GTER-LAEVVEKCA-FSDDTVIVNVQGDEPMI-PATIIRQVADNLAQR--QVGMATLAV 144 (264)
T ss_dssp HHHH-HHHHHHHHT-CCTTCEEEEECTTCTTC-CHHHHHHHHHHHHTS--SCSEEEEEE
T ss_pred CHHH-HHHHHHHhc-cCCCCEEEEEcCCcccC-CHHHHHHHHHHHhhc--CCCEEEEEE
Confidence 4444 666666532 13679999999999 45 699999999888754 234444433
No 27
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=28.47 E-value=38 Score=30.87 Aligned_cols=25 Identities=16% Similarity=0.177 Sum_probs=21.7
Q ss_pred cCCCCEEEEeCCC---CCcCchHHHHHHH
Q 012538 28 ISNGPVILNLDCD---MYANDGDAIREAL 53 (461)
Q Consensus 28 ~s~~~~il~lDaD---~~~~~p~~l~~~~ 53 (461)
.+++|+++.+||| .-- +|+.+.+.+
T Consensus 51 ~~~~dhllfIDAD~~~I~F-dPe~V~rLl 78 (203)
T 2c0n_A 51 MKDYDTLAFLDEDVVPIEI-DFQKVEAKF 78 (203)
T ss_dssp CTTCCEEEEECTTEEEEEC-CHHHHHHHH
T ss_pred cCCCCEEEEEeCCCCcccc-CHHHHHHHH
Confidence 3778999999999 888 798888876
No 28
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=27.93 E-value=1e+02 Score=27.35 Aligned_cols=44 Identities=7% Similarity=0.011 Sum_probs=33.5
Q ss_pred CChHHHHHHHHHhccccCCCCEEEEeCCCC-CcCchHHHHHHHHHhhc
Q 012538 12 NFKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFLLD 58 (461)
Q Consensus 12 ~~KAGaLN~~l~~~~~~s~~~~il~lDaD~-~~~~p~~l~~~~~~f~d 58 (461)
.+..+++-.|++... .+.++++++|+|+ .. +++.+++++..+.+
T Consensus 81 ~~~~~sv~~al~~~~--~~~~~vl~~d~d~P~~-~~~~i~~l~~~~~~ 125 (228)
T 2yc3_A 81 KERQDSVYSGLQEID--VNSELVCIHDSARPLV-NTEDVEKVLKDGSA 125 (228)
T ss_dssp SSHHHHHHHHHTTSC--TTCSEEEEEETTCTTC-CHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhhc--cCCCEEEEecCCCccC-CHHHHHHHHHHHHh
Confidence 356778888887632 3468999999997 66 68899999887754
No 29
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=25.75 E-value=51 Score=28.46 Aligned_cols=40 Identities=10% Similarity=0.018 Sum_probs=31.2
Q ss_pred ChHHHHHHHHHhccccCCCCEEEEeCCCC-CcCchHHHHHHHHH
Q 012538 13 FKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCF 55 (461)
Q Consensus 13 ~KAGaLN~~l~~~~~~s~~~~il~lDaD~-~~~~p~~l~~~~~~ 55 (461)
+-++++-.|++... .+.+.+++++||+ .+ +++.+++++..
T Consensus 80 g~~~~i~~al~~~~--~~~~~vlv~~~D~P~~-~~~~i~~l~~~ 120 (197)
T 2wee_A 80 GCAASLRVALARVH--PRATGIVLMLGDQPQV-APATLRRIIDV 120 (197)
T ss_dssp CCHHHHHHHHTTSC--TTEEEEEEEETTCTTC-CHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhc--ccCCeEEEEeCCcCCC-CHHHHHHHHhh
Confidence 46788888888621 2568999999999 56 68899988876
No 30
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=25.66 E-value=1.1e+02 Score=28.37 Aligned_cols=53 Identities=13% Similarity=0.307 Sum_probs=36.4
Q ss_pred HHHHHHHHhccccCCCCEEEEeCCCC-CcCchHHHHHHHHHhhcccCCCcEEEEecC
Q 012538 16 GAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFLLDEKREHEIAFVQHP 71 (461)
Q Consensus 16 GaLN~~l~~~~~~s~~~~il~lDaD~-~~~~p~~l~~~~~~f~d~~~~~~va~VQ~p 71 (461)
+++..+++... ..+.|.++++|||+ .+ +|+.+++++..+.+. .+..++.+-+|
T Consensus 77 ~~i~~a~~~~~-~~~~d~vlv~~gD~Pli-~~~~i~~li~~~~~~-~~~~~at~~~~ 130 (253)
T 4fcu_A 77 DRLSEVARIKG-WDADDIIVNVQGDEPLL-PAQLVQQVAKLLVDK-PNCSMSTLCEP 130 (253)
T ss_dssp HHHHHHHHHHT-CCTTCEEEECCTTCTTC-CHHHHHHHHHHHHHC-TTCSEEEEEEE
T ss_pred HHHHHHHHhcC-cCCCCEEEEEeCCcccC-CHHHHHHHHHHHHhC-CCCCEEEEeEE
Confidence 46777777632 12568999999999 56 699999999888642 12345555444
No 31
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=25.45 E-value=69 Score=29.72 Aligned_cols=43 Identities=5% Similarity=-0.109 Sum_probs=34.1
Q ss_pred CChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchH----HHHHHHHHhhcc
Q 012538 12 NFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGD----AIREALCFLLDE 59 (461)
Q Consensus 12 ~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~----~l~~~~~~f~d~ 59 (461)
.+-++++-.+++.. +.+.++++.||++. +++ .+++++.++.+.
T Consensus 106 ~Gt~~al~~a~~~l----~~~~~lv~~~D~~~-~~~~~~~~l~~l~~~~~~~ 152 (281)
T 3juk_A 106 KGLGHAILTGEALI----GNEPFAVILADDLC-ISHDHPSVLKQMTSLYQKY 152 (281)
T ss_dssp CCHHHHHHHTHHHH----CSSCEEEECTTEEE-ECTTSCCHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHc----CCCCEEEEeCCeec-cCccchHHHHHHHHHHHHc
Confidence 46789999998873 34678899999988 788 899999888653
No 32
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=25.45 E-value=76 Score=28.18 Aligned_cols=45 Identities=7% Similarity=0.148 Sum_probs=32.9
Q ss_pred ChHHHHHHHHHhcccc-C--CCCEEEEeCCCC-CcCchHHHHHHHHHhhc
Q 012538 13 FKAGAMNALIRVSSVI-S--NGPVILNLDCDM-YANDGDAIREALCFLLD 58 (461)
Q Consensus 13 ~KAGaLN~~l~~~~~~-s--~~~~il~lDaD~-~~~~p~~l~~~~~~f~d 58 (461)
+...++-.+++..... . +.|++++++||+ .+ +++.+++++..+.+
T Consensus 85 ~~~~~i~~~l~~~~~~~~~~~~~~vlv~~~D~P~~-~~~~i~~l~~~~~~ 133 (236)
T 2vsh_A 85 DRNTSIKNIIEAIDAYRPLTPEDIVVTHDSVRPFI-TLRMIQDNIQLAQN 133 (236)
T ss_dssp SHHHHHHHHHHHHHHHSCCCTTCEEEEEETTCTTC-CHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhhccCCCCCEEEEecCCcccC-CHHHHHHHHHHHHh
Confidence 4667777887763100 2 458999999999 66 68899999987754
No 33
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=24.94 E-value=1.4e+02 Score=27.66 Aligned_cols=43 Identities=19% Similarity=0.102 Sum_probs=31.5
Q ss_pred ChHHHHHHHHHhccccCCCCEEEEeCCCC-CcCchHHHHHHHHHhhc
Q 012538 13 FKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFLLD 58 (461)
Q Consensus 13 ~KAGaLN~~l~~~~~~s~~~~il~lDaD~-~~~~p~~l~~~~~~f~d 58 (461)
+.++ +..+++... ..+.|.+++++||+ .. +++.+++++..+.+
T Consensus 82 Gt~~-i~~a~~~l~-~~~~d~vlv~~gD~Pli-~~~~i~~li~~~~~ 125 (256)
T 3tqd_A 82 GTER-IAEAAVALG-FEDDEIIVCLQGDEPLI-PPDAIRKLAEDLDE 125 (256)
T ss_dssp HHHH-HHHHHHHTT-CCTTCEEEEECTTCCCC-CHHHHHHHHHHHHH
T ss_pred cHHH-HHHHHHHhC-cCCCCEEEEEeCCcccC-CHHHHHHHHHHHHh
Confidence 4444 666777632 13579999999999 45 69999999988864
No 34
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=24.54 E-value=1e+02 Score=27.90 Aligned_cols=41 Identities=12% Similarity=0.203 Sum_probs=32.8
Q ss_pred ChHHHHHHHHHhccccCCCCEEEEeCCCC-CcCchHHHHHHHHHhhc
Q 012538 13 FKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFLLD 58 (461)
Q Consensus 13 ~KAGaLN~~l~~~~~~s~~~~il~lDaD~-~~~~p~~l~~~~~~f~d 58 (461)
+..+++-.|++. .+.|.+++++||+ .+ +++.+++++..+.+
T Consensus 92 ~~~~~i~~al~~----~~~~~vlv~~~D~P~~-~~~~i~~l~~~~~~ 133 (236)
T 2px7_A 92 TRQASVARLLEA----ASLPLVLVHDVARPFV-SRGLVARVLEAAQR 133 (236)
T ss_dssp SHHHHHHHHHHH----CCSSEEEECCTTCCCC-CHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHH----cCCCeEEEecCccccC-CHHHHHHHHHHHHh
Confidence 367888888887 3478999999997 55 68999999887754
No 35
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=23.08 E-value=1.3e+02 Score=26.62 Aligned_cols=44 Identities=18% Similarity=0.161 Sum_probs=32.3
Q ss_pred ChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhc
Q 012538 13 FKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLD 58 (461)
Q Consensus 13 ~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d 58 (461)
+.+.++-.+++... .+.|.++++|||+-.-+++.+++++..+.+
T Consensus 81 g~~~sv~~~l~~~~--~~~d~vlv~~~D~P~~~~~~i~~l~~~~~~ 124 (228)
T 1ezi_A 81 SSISGVIHALETIG--SNSGTVTLLQPTSPLRTGAHIREAFSLFDE 124 (228)
T ss_dssp HHHHHHHHHHHHHT--CCSEEEEECCTTCTTCCHHHHHHHHTTCCT
T ss_pred ChHHHHHHHHHHhC--CCCCEEEEEcCCCCcCCHHHHHHHHHHHHh
Confidence 34677888888632 346899999999843268899998877654
No 36
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=22.25 E-value=98 Score=28.15 Aligned_cols=45 Identities=16% Similarity=0.166 Sum_probs=33.8
Q ss_pred ChHHHHHHHHHhcccc---CCCCEEEEeCCCC-CcCchHHHHHHHHHhhc
Q 012538 13 FKAGAMNALIRVSSVI---SNGPVILNLDCDM-YANDGDAIREALCFLLD 58 (461)
Q Consensus 13 ~KAGaLN~~l~~~~~~---s~~~~il~lDaD~-~~~~p~~l~~~~~~f~d 58 (461)
...+++-.|++..... .+.|+++++|||+ .+ .++.+++++..+.+
T Consensus 84 ~~~~sv~~al~~l~~~~~~~~~~~vlv~~~d~Pli-~~~~i~~li~~~~~ 132 (246)
T 3f1c_A 84 DRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFL-THRIIEENIDAALE 132 (246)
T ss_dssp SHHHHHHHHHHHHHHHTCCCTTCEEEEEETTCTTC-CHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhhhhcCCCCCEEEEecCcccCC-CHHHHHHHHHHHHh
Confidence 4677888888764210 1368999999998 55 69999999988865
No 37
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=20.21 E-value=1.5e+02 Score=29.41 Aligned_cols=43 Identities=19% Similarity=0.060 Sum_probs=34.0
Q ss_pred CChHHHHHHHHHhccccCCCCEEEEeCCCC-CcCchHHHHHHHHHhhc
Q 012538 12 NFKAGAMNALIRVSSVISNGPVILNLDCDM-YANDGDAIREALCFLLD 58 (461)
Q Consensus 12 ~~KAGaLN~~l~~~~~~s~~~~il~lDaD~-~~~~p~~l~~~~~~f~d 58 (461)
.+-++++-.+++.. .+.|.+++++||+ .+ .++.+++++..+.+
T Consensus 83 ~g~~~~i~~~~~~~---~~~~~~lv~~~D~P~i-~~~~i~~l~~~~~~ 126 (459)
T 4fce_A 83 LGTGHAMQQAAPHF---ADDEDILMLYGDVPLI-SVDTLQRLLAAKPE 126 (459)
T ss_dssp CCHHHHHHHHGGGS---CTTSEEEEEETTCTTC-CHHHHHHHHHHCCT
T ss_pred CCcHHHHHHHHHhc---CCCCcEEEEeCCcccC-CHHHHHHHHHHHhh
Confidence 35688899998872 3468999999999 55 68899999888754
Done!