Query 012542
Match_columns 461
No_of_seqs 198 out of 434
Neff 4.9
Searched_HMMs 46136
Date Fri Mar 29 03:44:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012542.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012542hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02305 lipoxygenase 100.0 3E-131 6E-136 1078.9 36.6 391 68-461 82-479 (918)
2 PLN02337 lipoxygenase 100.0 8E-130 2E-134 1069.5 33.3 391 55-461 19-424 (866)
3 PLN02264 lipoxygenase 100.0 2E-129 5E-134 1064.0 32.4 389 68-461 85-481 (919)
4 PF00305 Lipoxygenase: Lipoxyg 100.0 1.3E-82 2.8E-87 692.1 9.1 244 214-461 1-246 (667)
5 cd01751 PLAT_LH2 PLAT/ LH2 dom 100.0 1.1E-39 2.4E-44 294.1 14.3 131 69-205 2-137 (137)
6 smart00308 LH2 Lipoxygenase ho 99.4 2E-12 4.3E-17 110.0 10.2 82 103-192 20-104 (105)
7 PF01477 PLAT: PLAT/LH2 domain 99.2 1.2E-10 2.7E-15 99.1 8.8 92 102-203 17-113 (113)
8 cd00113 PLAT PLAT (Polycystin- 99.0 2E-09 4.3E-14 93.0 10.9 94 101-203 18-116 (116)
9 cd02899 PLAT_SR Scavenger rece 98.9 4.8E-09 1E-13 92.0 8.8 79 102-193 19-99 (109)
10 cd01753 PLAT_LOX PLAT domain o 98.6 1.5E-07 3.2E-12 82.6 9.3 85 102-194 19-106 (113)
11 cd01756 PLAT_repeat PLAT/LH2 d 98.5 8.2E-07 1.8E-11 78.2 11.4 93 102-203 19-118 (120)
12 cd01752 PLAT_polycystin PLAT/L 98.4 2.4E-06 5.2E-11 75.3 10.3 93 102-202 19-117 (120)
13 cd01757 PLAT_RAB6IP1 PLAT/LH2 98.4 1.9E-06 4.1E-11 76.3 9.5 77 102-195 20-100 (114)
14 cd01754 PLAT_plant_stress PLAT 98.3 6.2E-06 1.3E-10 74.5 10.4 86 102-195 19-119 (129)
15 cd01755 PLAT_lipase PLAT/ LH2 71.9 47 0.001 29.4 10.0 76 103-188 20-105 (120)
16 TIGR03124 ctirate_citX holo-AC 49.3 8 0.00017 36.6 1.0 54 207-277 81-134 (165)
17 PF03802 CitX: Apo-citrate lya 34.4 23 0.00051 33.5 1.7 49 212-277 88-136 (170)
18 PF11248 DUF3046: Protein of u 30.4 15 0.00032 29.8 -0.3 22 439-461 20-41 (63)
19 PRK01392 citX 2'-(5''-triphosp 28.3 22 0.00049 34.1 0.5 56 207-276 87-142 (180)
20 PF06232 ATS3: Embryo-specific 26.0 2.2E+02 0.0047 26.2 6.3 52 139-193 66-117 (125)
21 KOG2080 Uncharacterized conser 24.8 32 0.00068 40.5 0.8 47 149-195 1020-1070(1295)
No 1
>PLN02305 lipoxygenase
Probab=100.00 E-value=2.8e-131 Score=1078.91 Aligned_cols=391 Identities=45% Similarity=0.838 Sum_probs=361.0
Q ss_pred eEEeEEEEeeccccCcccccccccccchhhhccCCcEEEEEEeeecCCCCCCCc---ccccccccccCCCCCCceeEEEE
Q 012542 68 IKVKAVVTVKPTVGGFLSNISLDQGLDDLGDLFGKSLLLELVSAELDPKTGLDK---STIQDYARKIGADGDGNMQYESE 144 (461)
Q Consensus 68 ~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~l~G~~v~lqLVSs~~~~~tg~~k---~~l~~w~~~~~~~~~~~~~y~v~ 144 (461)
..++++|+|+++++..++.. .++++|+++|++|++|+|||||++.+|+||++| ++|++|+++. ...+++++|+|+
T Consensus 82 ~~i~~~v~~~~~~~~~~~~~-~~~~~d~~~~~~g~~v~lqLvS~~~~~~~g~gk~~~~~l~~~~~~~-~~~~~~~~~~~~ 159 (918)
T PLN02305 82 IDVRAVITIRKKIKEKITEK-FEDQWEYFMNGIGQGILIQLVSEEIDPVTGSGKSVESSVRGWLPKP-SNDPHIVEYAAD 159 (918)
T ss_pred CeEEEEEEEEeecccchhhc-ccchhhHHHHhhCCeEEEEEEeccccCCCCCcccccchhhccccCC-CCCCCceEEEEE
Confidence 78888888888877666553 257899999999999999999999999999554 8999999763 321667899999
Q ss_pred EeccCCCCceeEEEEEecCCCceEEeEEEEecCCCCcEEEeeCccccCCCCCCcceEEeeCceeccCCCChhHHHHHHHH
Q 012542 145 FEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEE 224 (461)
Q Consensus 145 f~v~~~fG~pgAi~V~n~h~~e~fl~~Itl~~~p~~~v~FpCnSWV~~~~~~~~~RiFF~nk~yLP~eTP~~L~~lRe~E 224 (461)
|+||++||+||||+|+|.|++||||++|+|+++|+|+|||+|||||||+++|+.+||||+||+|||++||++|++|||+|
T Consensus 160 f~~~~~fG~pGA~~v~N~h~~ef~l~~i~l~~~p~g~v~f~cnSWv~~~~~~~~~RiFF~nk~ylP~~tP~~l~~~Re~e 239 (918)
T PLN02305 160 FTVPFDFGKPGAVLVTNLHGKEFYLMEIVIHGFDDGPIFFPANTWIHSRKDNPESRIIFRNQAYLPSQTPPGIKDLRRED 239 (918)
T ss_pred EeeccccCCcceEEEEeCCCceEEEEEEEEecCCCCeEEEeccCccccCCCCCCCceEecCCCcCcccCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCccccCeeeecccccCCCCCCCCCCCcccccCCCCCCCCCccCCCCCCCCCCCCccccCC---CCcCCCC
Q 012542 225 LTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREG---NFYVPRD 301 (461)
Q Consensus 225 L~~lRGdG~GeRk~~DRIYdYdvYNDLG~PD~~~~l~RPvLGG~~~PYPRRcRTGR~~~~~dp~~Esr~~---~~yvPrD 301 (461)
|++|||||+||||+||||||||||||||+||++++++||||||++||||||||||||||++||.+|||.. .+|||||
T Consensus 240 L~~lRGdg~Gerk~~dRiYdYd~YNDLG~Pd~~~~~~RpvLGG~~~PYPRR~RTGR~~t~~Dp~~Esr~~~~~~~YvPrD 319 (918)
T PLN02305 240 LLSLRGNGKGERKPHDRIYDYAPYNDLGNPDKDEDLARPVLGGEEWPYPRRCRTGRPPTKKDPLCESRIEKPHPVYVPRD 319 (918)
T ss_pred HHHhcCCCCCcCCccccccchhhhccCCCCCCCccccCcccCCCCCCCCCcCcCCCCCCCCCCcccccccCCCCcCCCCC
Confidence 9999999999999999999999999999999999999999999779999999999999999999999953 4799999
Q ss_pred CCcchhhhcchhhhHHHHHHHhhhhhhhhhcCCCCCCCCCHHHHHHhhcCCCCCCCccccccccchhh-hhHHhhhccCc
Q 012542 302 EAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLP-RLVKAIEDTGD 380 (461)
Q Consensus 302 E~Fs~~K~~~F~~~~lk~~~~~~~p~l~~~~~~~~~~F~sf~dI~~Ly~~g~~lp~~~~~~~~~~~~~-~~~~~i~~~~~ 380 (461)
|+|+++|+++|+++++|+++|+++|+|+++++.+..+|++|+||++||++|++||......+.+..+| .+.+.++++++
T Consensus 320 E~f~~~K~~~f~~~~lk~~~~~~~p~~~~~~~~~~~~F~~f~~i~~Ly~~g~~l~~~~~~~~~~~p~~~~~~~~i~~~~~ 399 (918)
T PLN02305 320 ETFEEIKRNTFSAGRLKALLHNLIPSIAAALSSSDIPFTCFSDIDKLYNDGILLKTEEPKDIGLNPFLGNFMKQVLSVSE 399 (918)
T ss_pred CCcccchhhhHHHHHHHHHHHhhhhHHHHhcCCCCCCCCCHHHHHHHhccCCcCCchhhhhhhcCCchHHHHHHhhhccc
Confidence 99999999999999999999999999999999889999999999999999999997422222231143 55555688899
Q ss_pred cccccCCccccccccccccccHHHHHHHhhCCCchhhhhhccCCCCCCCCCCccCCCCCCccHHHHhhhcCCCCCHHHhh
Q 012542 381 NILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEVY 460 (461)
Q Consensus 381 ~~lkf~~P~vi~~d~~aW~~DeEFaRQ~LAGvNP~~I~rl~efP~~SkLDp~~YG~~~saIT~e~Ie~~L~G~~TveeAl 460 (461)
.+||||+|+||++|+++|++|+|||||||||+||++|+||+|||++|||||++||||+|+||+|||+++|+| +||||||
T Consensus 400 ~~lkf~~P~vi~~d~~~W~~DeeFaRQ~LaGvNP~~I~rl~efP~~skldp~~yG~~~s~iT~e~ve~~L~G-~TleeAl 478 (918)
T PLN02305 400 RLLKYDIPAVIKRDRFAWLRDNEFARQALAGVNPVNIEILKEFPILSKLDPAVYGPPESALTEELIERELEG-MTVEKAI 478 (918)
T ss_pred ccccCCCcceeecccccccChHHHHHHHHcCCCChheeeccccCCccccCccccCCcCCCcCHHHHHhhcCC-CcHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 9999998
Q ss_pred C
Q 012542 461 E 461 (461)
Q Consensus 461 ~ 461 (461)
+
T Consensus 479 ~ 479 (918)
T PLN02305 479 E 479 (918)
T ss_pred H
Confidence 5
No 2
>PLN02337 lipoxygenase
Probab=100.00 E-value=7.9e-130 Score=1069.48 Aligned_cols=391 Identities=41% Similarity=0.698 Sum_probs=362.6
Q ss_pred cceeeeEEeeeee-eEEeEEEEeeccccCcccccccccccchhhhccCCcEEEEEEeeecCC-CCC-CC----ccccccc
Q 012542 55 NTIKAIATSTEKS-IKVKAVVTVKPTVGGFLSNISLDQGLDDLGDLFGKSLLLELVSAELDP-KTG-LD----KSTIQDY 127 (461)
Q Consensus 55 ~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~l~G~~v~lqLVSs~~~~-~tg-~~----k~~l~~w 127 (461)
++++|+|++|+++ ++++++.+ +++|+++|++|++|+|||||++.+| +|| ++ +++|++|
T Consensus 19 ~~~~~~v~l~~k~~ld~~~~~~---------------~~lD~~~~l~G~~v~lqLvS~~~~~p~~g~~gk~~k~a~l~~w 83 (866)
T PLN02337 19 EKIKGTVVLMKKNVLDFNDFNA---------------SVLDRVHELLGKGVSLQLISSTVVDPENGLRGKLGKEAYLEKW 83 (866)
T ss_pred ceEEEEEEEEEecccchhhccc---------------chhhhHHHhcCCeEEEEEEeccccccccCCccccCCccchhhh
Confidence 3788888888776 56665443 7899999999999999999999987 687 33 3899999
Q ss_pred ccccCCCCCCceeEEEEEeccCCCCceeEEEEEecCCCceEEeEEEEecCC-CCcEEEeeCccccCCCCCCcceEEeeCc
Q 012542 128 ARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLP-NGPVNVTCNSWLHSKHDNKQKRVFFTNK 206 (461)
Q Consensus 128 ~~~~~~~~~~~~~y~v~f~v~~~fG~pgAi~V~n~h~~e~fl~~Itl~~~p-~~~v~FpCnSWV~~~~~~~~~RiFF~nk 206 (461)
+++.....+++++|+|+|+||++||+||||+|+|.|++||||++|+|+++| +|+|||+|||||||+++|+.+||||+||
T Consensus 84 ~~~~~~~~~~~~~y~~~F~~~~~fG~pGAi~V~N~h~~EffL~sitle~~p~~g~v~f~cnSWV~~~~~~~~~RiFF~nk 163 (866)
T PLN02337 84 ITTITSLTAGESAFKVTFDWDEKIGVPGAFIIKNNHHSEFYLKTVTLEDVPGHGRVHFVCNSWIYPAKRYRYDRVFFSNK 163 (866)
T ss_pred ccCCCCCCCCceEEEEEEEecccCCCcceEEEEecCCceEEEEEEEEecCCCCCcEEEecCCccccCCCCCCCceEecCC
Confidence 987555467788999999999999999999999999999999999999999 6999999999999999999999999999
Q ss_pred eeccCCCChhHHHHHHHHHHHHhcCCCCCccccCeeeecccccCCCCCCCCCCCcccccCC-CCCCCCCccCCCCCCCCC
Q 012542 207 LYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGG-KQNPYPRRCRTGRPRCDT 285 (461)
Q Consensus 207 ~yLP~eTP~~L~~lRe~EL~~lRGdG~GeRk~~DRIYdYdvYNDLG~PD~~~~l~RPvLGG-~~~PYPRRcRTGR~~~~~ 285 (461)
+|||++||++|++|||+||++|||||+||||+||||||||||||||+||++++++|||||| ++||||||||||||||++
T Consensus 164 ~ylp~~tP~~l~~~R~~eL~~lrG~g~gerk~~dRiYdyd~YnDlg~pd~~~~~~RpvLGg~~~~pyPRR~rTgr~~t~~ 243 (866)
T PLN02337 164 TYLPSQTPAPLRPYREEELVNLRGDGKGELKEWDRVYDYDYYNDLGDPDKGNPYARPVLGGSQEYPYPRRGRTGRKPTKT 243 (866)
T ss_pred CcCcccccHHHHHHHHHHHHHhcCCCCCCCCcccchhhhhhhccCCCCCCCccccCccCCCCCCCCCCCcccCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999 679999999999999999
Q ss_pred CCCccccCC----CCcCCCCCCcchhhhcchhhhHHHHHHHhhhhhhhhhcCCCCCCCCCHHHHHHhhcCCCCCCCcccc
Q 012542 286 DQFSEKREG----NFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQE 361 (461)
Q Consensus 286 dp~~Esr~~----~~yvPrDE~Fs~~K~~~F~~~~lk~~~~~~~p~l~~~~~~~~~~F~sf~dI~~Ly~~g~~lp~~~~~ 361 (461)
||.+|||.. .+||||||+|+++|+++|+++++||++|+++|+|+++++.+..+|++|+||++||++|++||.....
T Consensus 244 dp~~esr~~~~~~~~yvPrDE~f~~~k~~~f~~~~l~~~~~~~~p~~~~~~~~~~~~f~~f~~i~~ly~~g~~lp~~~~~ 323 (866)
T PLN02337 244 DPNSESRLPLLSLNIYVPRDERFGHLKMSDFLAYALKAIAQVLVPELEALFDKTPNEFDSFEDVLKLYEGGIKLPNGPLL 323 (866)
T ss_pred CCccccccccCCCCcccCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhhcCCCCCCchHH
Confidence 999999943 4799999999999999999999999999999999999998899999999999999999999976443
Q ss_pred ccccch--hhhhHHhhhccCccccccCCccccccccccccccHHHHHHHhhCCCchhhhhhccCCCCCCCCCCccCCCCC
Q 012542 362 GFWNTL--LPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPES 439 (461)
Q Consensus 362 ~~~~~~--~~~~~~~i~~~~~~~lkf~~P~vi~~d~~aW~~DeEFaRQ~LAGvNP~~I~rl~efP~~SkLDp~~YG~~~s 439 (461)
+.++.+ ++.++++++++++.+||||+|+||++|+++|++|+|||||||||+||++|+||++||++|+|||++||+|+|
T Consensus 324 ~~~~~~~p~~~~~~~~~~~~~~~l~fp~P~vi~~d~~~W~~DeeFarQ~LaG~NP~~I~rl~~~P~~~~ld~~~yg~~~s 403 (866)
T PLN02337 324 EELRKNIPLEMLKELLRTDGEYLLKFPMPQVIKEDKSAWRTDEEFAREMLAGVNPVVIRRLTEFPPKSKLDPKKYGDQNS 403 (866)
T ss_pred HHhhhcChHHHHHHHHhhcccccccCCCCceeecccccccCHHHHHHHHhcCCCChheeecccCCCcccCChhhcCCccC
Confidence 344443 456777778889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccHHHHhhhcCCCCCHHHhhC
Q 012542 440 AITTELIEKEIGGMISVEEVYE 461 (461)
Q Consensus 440 aIT~e~Ie~~L~G~~TveeAl~ 461 (461)
+||+|||+++|+| +||+|||+
T Consensus 404 ~iT~e~v~~~L~g-~Tl~eAl~ 424 (866)
T PLN02337 404 SITEEHIEKNLEG-LTVQEALE 424 (866)
T ss_pred ccCHHHHHhccCC-ccHHHHHH
Confidence 9999999999999 99999985
No 3
>PLN02264 lipoxygenase
Probab=100.00 E-value=2.2e-129 Score=1063.99 Aligned_cols=389 Identities=47% Similarity=0.838 Sum_probs=360.2
Q ss_pred eEEeEEEEeeccccCcccccccccccchhhhccCCcEEEEEEeeecCCCCCCCc----ccccccccccCCCCCCceeEEE
Q 012542 68 IKVKAVVTVKPTVGGFLSNISLDQGLDDLGDLFGKSLLLELVSAELDPKTGLDK----STIQDYARKIGADGDGNMQYES 143 (461)
Q Consensus 68 ~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~l~G~~v~lqLVSs~~~~~tg~~k----~~l~~w~~~~~~~~~~~~~y~v 143 (461)
+.++++|+|+++++..++.. .++++|+++|++|++|+|||||++.+|+||+++ ++|++|+++ ....+++++|+|
T Consensus 85 ~~i~~~v~~~~~~~~~~~~~-~~~~~D~~~~~~G~~v~lqLVSs~~~~~tg~~~~~~~a~l~~~~~~-~~~~~~~~~y~~ 162 (919)
T PLN02264 85 FKVRAVVTVRNKNKEDLKET-LVKHLDAFTDKIGRNVVLELISTQVDPKTKEPKKSKAAVLKDWSKK-SNIKAERVHYTA 162 (919)
T ss_pred EEEEEEEEEEeccccchhhc-ccchhhHHHHHhCCeEEEEEEeccccCCCCCccCCCcchhcccccC-CCCCCCceEEEE
Confidence 77888888888776655553 258899999999999999999999999998443 899999987 344577889999
Q ss_pred EEeccCCCCceeEEEEEecCCCceEEeEEEEecCCCCcEEEeeCccccCCCCCCcceEEeeCceeccCCCChhHHHHHHH
Q 012542 144 EFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAE 223 (461)
Q Consensus 144 ~f~v~~~fG~pgAi~V~n~h~~e~fl~~Itl~~~p~~~v~FpCnSWV~~~~~~~~~RiFF~nk~yLP~eTP~~L~~lRe~ 223 (461)
+|+||++||+||||+|+|+|++||||++|+|+++|+|+|||+|||||||+++|+.+||||+||+|||++||++|++|||+
T Consensus 163 ~F~~~~~fG~pGAi~V~N~h~~EffL~~itle~~p~g~v~F~cnSWV~p~~~~~~~RiFF~Nk~YLP~~tP~~l~~~Re~ 242 (919)
T PLN02264 163 EFTVDSAFGSPGAITVTNKHQKEFFLESITIEGFACGPVHFPCNSWVQSQKDHPGKRIFFTNQPYLPSETPAGLRALREK 242 (919)
T ss_pred EEEeccccCCcceEEEEeCCCceEEEEEEEeccCCCCcEEEecCCccccCcCCCCCceEecCCCcCcccCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCccccCeeeecccccCCCCCCCCCCCcccccCCCCCCCCCccCCCCCCCCCCCCccccCC---CCcCCC
Q 012542 224 ELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREG---NFYVPR 300 (461)
Q Consensus 224 EL~~lRGdG~GeRk~~DRIYdYdvYNDLG~PD~~~~l~RPvLGG~~~PYPRRcRTGR~~~~~dp~~Esr~~---~~yvPr 300 (461)
||++|||||+||||+||||||||||||||+||++++++||||||++||||||||||||||++||.+|||.. .+||||
T Consensus 243 eL~~lRGdg~Gerk~~dRiYdYd~YNDLG~Pd~~~~~~RpvLGG~~~PYPRR~RTGR~~t~~dp~~Esr~~~~~~iYvPr 322 (919)
T PLN02264 243 ELRNLRGDGKGVRKLSDRIYDFDVYNDLGNPDKSRELARPTLGGKKIPYPRRCRTGRLPTDSDMMAESRVEKPLPMYVPR 322 (919)
T ss_pred HHHHhcCCCCCcCCcccchhhhhhhccCCCCCCCccccCcccCCCCCCCCCCCcCCCCCCCCCCcccccccCCCceeCCC
Confidence 99999999999999999999999999999999999999999999779999999999999999999999954 469999
Q ss_pred CCCcchhhhcchhhhHHHHHHHhhhhhhhhhcCCCCCCCCCHHHHHHhhcCCCCCCCccccccccch-hhhhHHhhhccC
Q 012542 301 DEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTL-LPRLVKAIEDTG 379 (461)
Q Consensus 301 DE~Fs~~K~~~F~~~~lk~~~~~~~p~l~~~~~~~~~~F~sf~dI~~Ly~~g~~lp~~~~~~~~~~~-~~~~~~~i~~~~ 379 (461)
||+|+++|+++|+++++|+++|+++|+|+++++.+ +|+||+||++||++|++||.....+.++.+ +|.+.+.+++++
T Consensus 323 DE~f~~~K~~~f~~~~lk~~~~~~~p~~~~~~~~~--~F~~f~~i~~Ly~~g~~l~~~~~~~~~~~~p~~~~~~~~~~~~ 400 (919)
T PLN02264 323 DEQFEESKQDTFAAGRLKAVLHNLIPSLKASILAE--DFANFGEIDSLYKEGLLLKLGFQDDIFKKFPLPKVVTTLQESS 400 (919)
T ss_pred CCCcccchhhhHHHHHHHHHHHHhhhhhhhhcCCC--CCCCHHHHHHHHhcCCcCCcchhhhHhhcCChHHHHHHhhhcc
Confidence 99999999999999999999999999999998864 999999999999999999974223333334 546666668889
Q ss_pred ccccccCCccccccccccccccHHHHHHHhhCCCchhhhhhccCCCCCCCCCCccCCCCCCccHHHHhhhcCCCCCHHHh
Q 012542 380 DNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEV 459 (461)
Q Consensus 380 ~~~lkf~~P~vi~~d~~aW~~DeEFaRQ~LAGvNP~~I~rl~efP~~SkLDp~~YG~~~saIT~e~Ie~~L~G~~TveeA 459 (461)
+.+||||+|+||++|+++|++|+|||||||||+||++|+||++||++|+|||++||+|+|+||+|||+++|+| +||+||
T Consensus 401 ~~~lkf~~P~vi~~d~~~W~~DeeFarQ~LaGvNP~~I~rl~e~P~~s~ld~~~yg~~~s~it~e~v~~~L~G-~Tl~eA 479 (919)
T PLN02264 401 EGLLKYDTPKILSKDKFAWLRDDEFARQAIAGINPVNIERVKVFPPVSNLDPEIYGPQHSALTEDHIIGHLDG-LSVQQA 479 (919)
T ss_pred cccccCCCCceeecChhhccCHHHHHHHHHcCCCchhhhhhhhcCCCCCCCHhhcCCccchhhHHHHhhccCC-CcHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred hC
Q 012542 460 YE 461 (461)
Q Consensus 460 l~ 461 (461)
|+
T Consensus 480 l~ 481 (919)
T PLN02264 480 LE 481 (919)
T ss_pred HH
Confidence 85
No 4
>PF00305 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Lipoxygenases (1.13.11.- from EC) are a class of iron-containing dioxygenases which catalyses the hydroperoxidation of lipids, containing a cis,cis-1,4-pentadiene structure. They are common in plants where they may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. In mammals a number of lipoxygenases isozymes are involved in the metabolism of prostaglandins and leukotrienes []. Sequence data is available for the following lipoxygenases: Plant lipoxygenases (1.13.11.12 from EC, IPR001246 from INTERPRO). Plants express a variety of cytosolic isozymes as well as what seems to be a chloroplast isozyme []. Mammalian arachidonate 5-lipoxygenase (1.13.11.34 from EC, IPR001885 from INTERPRO). Mammalian arachidonate 12-lipoxygenase (1.13.11.31 from EC, IPR001885 from INTERPRO). Mammalian erythroid cell-specific 15-lipoxygenase (1.13.11.33 from EC, IPR001885 from INTERPRO). The iron atom in lipoxygenases is bound by four ligands, three of which are histidine residues []. Six histidines are conserved in all lipoxygenase sequences, five of them are found clustered in a stretch of 40 amino acids. This region contains two of the three iron-ligands; the other histidines have been shown [] to be important for the activity of lipoxygenases. This entry represents the C-terminal region of these proteins.; GO: 0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 3FG3_D 3FG1_C 3FG4_D 3DY5_A 2FNQ_B 2P0M_A 3RDE_B 2IUJ_A 1RRL_B 1JNQ_A ....
Probab=100.00 E-value=1.3e-82 Score=692.08 Aligned_cols=244 Identities=57% Similarity=0.963 Sum_probs=195.6
Q ss_pred ChhHHHHHHHHHHHHhcCCCCCccccCeeeecccccCCCCCCCCCCCcccccCC-CCCCCCCccCCCCCCCCCCCCcccc
Q 012542 214 PDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGG-KQNPYPRRCRTGRPRCDTDQFSEKR 292 (461)
Q Consensus 214 P~~L~~lRe~EL~~lRGdG~GeRk~~DRIYdYdvYNDLG~PD~~~~l~RPvLGG-~~~PYPRRcRTGR~~~~~dp~~Esr 292 (461)
|+||++||++||++|||||+||||+||||||||||||||+||++++++|||||| ++|||||||||||||+++||.+|+|
T Consensus 1 ~~~l~~~R~~eL~~lrG~g~gerk~~dRiYdYd~YnDLG~pd~~~~~~RpvlGgs~~~PYPRR~RTGr~~~~~Dp~sEsr 80 (667)
T PF00305_consen 1 PAGLKKLREEELKNLRGDGTGERKEWDRIYDYDVYNDLGNPDKGPELARPVLGGSKEFPYPRRCRTGRPPTKTDPKSESR 80 (667)
T ss_dssp SGGGHHHHHHHHHHHHTTS-S---TT-----EE-B-SSSBGGGTGCG----BSSSSSS----EE----SBESSCTTSBGC
T ss_pred ChHHHHHHHHHHHHhcCCCCCccccccceeeeecccCCCCCCCCCcCCCCCCCCCCCCCCCccCCCCCCCCCCCccccCc
Confidence 789999999999999999999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred CCCCcCCCCCCcchhhhcchhhhHHHHHHHhhhhhhhhhcCCCCCCCCCHHHHHHhhcCCCCCCCccccccccch-hhhh
Q 012542 293 EGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTL-LPRL 371 (461)
Q Consensus 293 ~~~~yvPrDE~Fs~~K~~~F~~~~lk~~~~~~~p~l~~~~~~~~~~F~sf~dI~~Ly~~g~~lp~~~~~~~~~~~-~~~~ 371 (461)
+.++||||||+|++.|+++|.++++|+++|.++|.|++++..+..+|+||+||++||++|++||. ..+.+.+ ++.+
T Consensus 81 ~~~~YVPRDE~F~~~K~~dF~~~~lks~~~~llP~L~~~~~~~~~eF~sF~dId~LY~~g~~l~~---~~~~~~~~~~~~ 157 (667)
T PF00305_consen 81 SGDIYVPRDERFSEVKQSDFLANALKSLLHALLPALKSLFDDTPNEFDSFEDIDDLYEEGIKLPT---DLLKKLIPLELL 157 (667)
T ss_dssp -SSGGS-GGGS-SCSSGGGHHHHHHHHHHHTHHHHHHHHTTSSTSSCSSHHHHHHHHTTTEE--H---HHHCCHTTSTTC
T ss_pred cccccCCccccccchhHHHHHHHHHHHHHHhHHHHHHHHhcccCcccCCHHHHHHHHhccccchh---hHhhhcCcHHHH
Confidence 88999999999999999999999999999999999999988889999999999999999999882 1122222 4567
Q ss_pred HHhhhccCccccccCCccccccccccccccHHHHHHHhhCCCchhhhhhccCCCCCCCCCCccCCCCCCccHHHHhhhcC
Q 012542 372 VKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIG 451 (461)
Q Consensus 372 ~~~i~~~~~~~lkf~~P~vi~~d~~aW~~DeEFaRQ~LAGvNP~~I~rl~efP~~SkLDp~~YG~~~saIT~e~Ie~~L~ 451 (461)
+++++.+++.+||||+|+|+++++++|++|+|||||+|||+||++|+||++||++|+|||++||+++|+||+|||+.+|+
T Consensus 158 ~~~~~~~~~~~~kf~~p~v~~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~~~ld~~~yg~~~s~it~e~i~~~l~ 237 (667)
T PF00305_consen 158 KELFRTDGENILKFPTPQVIERDRFAWRTDEEFARQRLAGVNPVVIRRLTEFPPKSKLDPAIYGDQESPITDEHIEPQLE 237 (667)
T ss_dssp CTTSBETSSSEEB----HHHHCHHHHTTSHHHHHHHHHHSSSTTSEEE-SSSSTTS-SSHHCCTSSB-STTHHHHHHHCH
T ss_pred HHHHhhcccceeeCCCCccchhhhhccCChHHHHHHHHcCCCchHhhccccCCccccccHhhcCCccCCchHHHhhhccC
Confidence 77788889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHhhC
Q 012542 452 GMISVEEVYE 461 (461)
Q Consensus 452 G~~TveeAl~ 461 (461)
| +||+|||+
T Consensus 238 g-~tl~~al~ 246 (667)
T PF00305_consen 238 G-LTLEEALK 246 (667)
T ss_dssp C-S-HHHHHH
T ss_pred C-CcHHHHHh
Confidence 9 99999984
No 5
>cd01751 PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase related proteins. Lipoxygenases are nonheme, nonsulfur iron dioxygenases that act on lipid substrates containing one or more (Z,Z)-1,4-pentadiene moieties. In plants, the immediate products are involved in defense mechanisms against pathogens and may be precursors of metabolic regulators. The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.
Probab=100.00 E-value=1.1e-39 Score=294.12 Aligned_cols=131 Identities=52% Similarity=0.869 Sum_probs=114.5
Q ss_pred EEeEEEEeeccccCcccccccccccchhhhccCCcEEEEEEeeecCCCCCCCc----ccccccccccCCCCCCceeEEEE
Q 012542 69 KVKAVVTVKPTVGGFLSNISLDQGLDDLGDLFGKSLLLELVSAELDPKTGLDK----STIQDYARKIGADGDGNMQYESE 144 (461)
Q Consensus 69 ~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~l~G~~v~lqLVSs~~~~~tg~~k----~~l~~w~~~~~~~~~~~~~y~v~ 144 (461)
.++|+++++++++..++... +.+|++.|++|++|+|||||++++|+||++| ++|++|.++. +++++|+++
T Consensus 2 ~vka~V~v~~k~~~~~~~~~--~~~D~~~~llGk~v~lqLVSs~~d~~tg~~k~~~~~~l~~~~~~~----~~e~~y~~~ 75 (137)
T cd01751 2 KVKATVTVMKKNKLDLNDDG--SGLDDLDDLLGRSLLLELVSSELDPKTGKGKKGKAAFLEGWGKSL----AGESAYEAE 75 (137)
T ss_pred EEEEEEEEEEeecccccccc--chhhhHHHhhCCeEEEEEEEeeecCCCCCcccccceeeecccccC----CcceEEEEE
Confidence 45566666665555444433 6789999999999999999999999999555 8899998653 556799999
Q ss_pred EeccCCCCceeEEEEEecCCCceEEeEEEEecCC-CCcEEEeeCccccCCCCCCcceEEeeC
Q 012542 145 FEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLP-NGPVNVTCNSWLHSKHDNKQKRVFFTN 205 (461)
Q Consensus 145 f~v~~~fG~pgAi~V~n~h~~e~fl~~Itl~~~p-~~~v~FpCnSWV~~~~~~~~~RiFF~n 205 (461)
|+||++||+||||+|+|+|++||||++|+|+++| +|+|||+|||||||+++|+.+||||+|
T Consensus 76 F~v~~~fG~pGAi~V~N~h~~EffLksitLe~~p~~g~v~F~CNSWVyp~~~~~~~RiFFsN 137 (137)
T cd01751 76 FEVPASFGPPGAVLVKNEHHSEFFLKSITLEGFGGSGTITFVCNSWVYPKKDYPDKRIFFPN 137 (137)
T ss_pred EEeecccCCccEEEEEECCCceEEEEEEEEeCCCCCccEEEEccccCccCCCCCCCCEEccC
Confidence 9999999999999999999999999999999999 599999999999999999999999997
No 6
>smart00308 LH2 Lipoxygenase homology 2 (beta barrel) domain.
Probab=99.39 E-value=2e-12 Score=110.01 Aligned_cols=82 Identities=39% Similarity=0.636 Sum_probs=63.7
Q ss_pred cEEEEEEeeecCCCCCC-CcccccccccccCCCCCCceeEEEEEeccCCCCceeEEEEEecC-CCceEEeEEEEecCC-C
Q 012542 103 SLLLELVSAELDPKTGL-DKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEH-HKEMYLKDIVLDGLP-N 179 (461)
Q Consensus 103 ~v~lqLVSs~~~~~tg~-~k~~l~~w~~~~~~~~~~~~~y~v~f~v~~~fG~pgAi~V~n~h-~~e~fl~~Itl~~~p-~ 179 (461)
+|+|+|++++.+ +|. ....+..|. + .. ...|+..|+++.++|++++|.|+|++ +.+|||++|+|++.+ +
T Consensus 20 ~V~l~L~g~~~~--s~~~~~~~~~~~~--f-~~---g~~~~f~v~~~~~lG~l~~v~v~~d~~~~~w~l~~V~V~~~~~~ 91 (105)
T smart00308 20 SVSLSLVGAEGD--GKESKLDYLFKGI--F-AR---GSTYEFTFDVDEDFGELGAVKIKNEHRHPEWFLKSITVKDLPTG 91 (105)
T ss_pred eEEEEEEeCCCC--CcceeccccCCcc--c-cC---CceEEEEEecccCCCCcEEEEEEeCCCCCCeEEEEEEEEECCCC
Confidence 699999999876 221 123444443 2 12 23666777789999999999999999 899999999998766 6
Q ss_pred CcEEEeeCccccC
Q 012542 180 GPVNVTCNSWLHS 192 (461)
Q Consensus 180 ~~v~FpCnSWV~~ 192 (461)
..++|+||+||++
T Consensus 92 ~~~~F~c~~Wl~~ 104 (105)
T smart00308 92 GKYHFPCNSWVYP 104 (105)
T ss_pred CEEEEEcCceeCC
Confidence 7899999999986
No 7
>PF01477 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxygenases (1.13.11.- from EC) are a class of iron-containing dioxygenases which catalyses the hydroperoxidation of lipids, containing a cis,cis-1,4-pentadiene structure. They are common in plants where they may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. In mammals a number of lipoxygenases isozymes are involved in the metabolism of prostaglandins and leukotrienes []. Sequence data is available for the following lipoxygenases: Plant lipoxygenases (1.13.11.12 from EC, IPR001246 from INTERPRO). Plants express a variety of cytosolic isozymes as well as what seems to be a chloroplast isozyme []. Mammalian arachidonate 5-lipoxygenase (1.13.11.34 from EC, IPR001885 from INTERPRO). Mammalian arachidonate 12-lipoxygenase (1.13.11.31 from EC, IPR001885 from INTERPRO). Mammalian erythroid cell-specific 15-lipoxygenase (1.13.11.33 from EC, IPR001885 from INTERPRO). The iron atom in lipoxygenases is bound by four ligands, three of which are histidine residues []. Six histidines are conserved in all lipoxygenase sequences, five of them are found clustered in a stretch of 40 amino acids. This region contains two of the three iron-ligands; the other histidines have been shown [] to be important for the activity of lipoxygenases. This entry represents a domain found in lipoxygenases and other enzymes. It is known as the PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology) domain, is found in a variety of membrane or lipid associated proteins. Structurally, this domain forms a beta-sandwich composed of two sheets of four strands each [, , ]. The most highly conserved regions coincide with the beta-strands, with most of the highly conserved residues being buried within the protein. An exception to this is a surface lysine or arginine that occurs on the surface of the fifth beta-strand of the eukaryotic domains. In pancreatic lipase, the lysine in this position forms a salt bridge with the procolipase protein. The conservation of a charged surface residue may indicate the location of a conserved ligand-binding site. It is thought that this domain may mediate membrane attachment via other protein binding partners.; GO: 0005515 protein binding; PDB: 3FG3_D 3FG1_C 3FG4_D 3DY5_A 2FNQ_B 3O8Y_B 3V99_B 3V92_A 3V98_B 1HPL_A ....
Probab=99.16 E-value=1.2e-10 Score=99.07 Aligned_cols=92 Identities=23% Similarity=0.438 Sum_probs=70.0
Q ss_pred CcEEEEEEeeecCCCCCCCcccc-cccccccCCCCCCceeEEEEEeccCCCCceeEEEEEec---CCCceEEeEEEEecC
Q 012542 102 KSLLLELVSAELDPKTGLDKSTI-QDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENE---HHKEMYLKDIVLDGL 177 (461)
Q Consensus 102 ~~v~lqLVSs~~~~~tg~~k~~l-~~w~~~~~~~~~~~~~y~v~f~v~~~fG~pgAi~V~n~---h~~e~fl~~Itl~~~ 177 (461)
..|+|+|+++... ++...| ..+.... ++ ..+|.++ .+.++|++.+|.|.++ +...|||++|+|...
T Consensus 17 ~~V~i~l~G~~g~----s~~~~l~~~~~~~~---g~-~d~F~i~--~~~~lG~i~~i~i~~~~~~~~~~W~l~~V~V~~~ 86 (113)
T PF01477_consen 17 ANVYITLYGSKGK----SGEIELLDPSGFNF---GS-TDTFTIE--TPEDLGEIQKIRIWHDGSGPSPSWYLDSVVVTDG 86 (113)
T ss_dssp SEEEEEEEETTEE----EEEEEEEEEEETST---TE-EEEEEEE--ESSCGCSEEEEEEEEESSSSSSEEEEEEEEEEET
T ss_pred CeEEEEEEECCCC----cceEEEeeeeeccc---Cc-eEEeeee--ecccCCCCcEEEEEEccCCCccceEEEEEEEEeC
Confidence 4599999986654 222222 2222111 22 4456655 5789999999999998 789999999999876
Q ss_pred C-CCcEEEeeCccccCCCCCCcceEEe
Q 012542 178 P-NGPVNVTCNSWLHSKHDNKQKRVFF 203 (461)
Q Consensus 178 p-~~~v~FpCnSWV~~~~~~~~~RiFF 203 (461)
+ +..+.|+||+||....+++.+|+||
T Consensus 87 ~~~~~~~F~~~~Wl~~~~~~~~~rvf~ 113 (113)
T PF01477_consen 87 ETGRTYTFPCNRWLDPDKDYKTERVFF 113 (113)
T ss_dssp TTSEEEEEEEEEEESTTEGCSSEEEEE
T ss_pred CCCcEEEEEcCCEECCCCCCCCccEEC
Confidence 6 6789999999999999999999998
No 8
>cd00113 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates.
Probab=99.03 E-value=2e-09 Score=92.98 Aligned_cols=94 Identities=13% Similarity=0.217 Sum_probs=69.0
Q ss_pred CCcEEEEEEeeecCCCCCCCccccc-ccccccCCCCCCceeEEEEEeccCCCCceeEEEEEecCCC---ceEEeEEEEec
Q 012542 101 GKSLLLELVSAELDPKTGLDKSTIQ-DYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHK---EMYLKDIVLDG 176 (461)
Q Consensus 101 G~~v~lqLVSs~~~~~tg~~k~~l~-~w~~~~~~~~~~~~~y~v~f~v~~~fG~pgAi~V~n~h~~---e~fl~~Itl~~ 176 (461)
..+|+|+|+++... +....+. ++.. + ..+. ..+|.++ .+.++|++.+|.|++++.. +|||++|+|.+
T Consensus 18 ~~~v~i~l~g~~g~----s~~~~l~~~~~~-f-~~g~-~~~f~v~--~~~~lG~i~~v~l~~d~~g~~~~W~l~~V~V~~ 88 (116)
T cd00113 18 DSNISLALYGENGN----SSDIPILDGPGS-F-ERGS-TDTFQID--LKLDIGDITKVYLRRDGSGLSDGWYCESITVQA 88 (116)
T ss_pred cCEEEEEEEeCCCC----cccEEccCCCCc-c-cCCC-ceEEEEe--ccCCCcCeEEEEEEECCCCCCCCEEEeEEEEEe
Confidence 35699999988654 2222222 2221 3 2222 3455554 6789999999999998755 99999999987
Q ss_pred CC-CCcEEEeeCccccCCCCCCcceEEe
Q 012542 177 LP-NGPVNVTCNSWLHSKHDNKQKRVFF 203 (461)
Q Consensus 177 ~p-~~~v~FpCnSWV~~~~~~~~~RiFF 203 (461)
.. +..++|+||+||.....++..|+|.
T Consensus 89 ~~~~~~~~F~~~~Wl~~~~~~~~~r~~~ 116 (116)
T cd00113 89 LGTKKVYTFPVNRWVLGGKWYTSVRSLK 116 (116)
T ss_pred CCCCCEEEEEeCCCcccCCCCCceeecC
Confidence 66 5789999999999998888888874
No 9
>cd02899 PLAT_SR Scavenger receptor protein. A subfamily of PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates. This subfamily contains Toxoplasma gondii Scavenger protein TgSR1.
Probab=98.92 E-value=4.8e-09 Score=92.01 Aligned_cols=79 Identities=13% Similarity=0.254 Sum_probs=61.5
Q ss_pred CcEEEEEEeeecCCCCCCCcccccccccccCCCCCCceeEEEEEeccCCCCceeEEEEEecC-CCceEEeEEEEecCC-C
Q 012542 102 KSLLLELVSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEH-HKEMYLKDIVLDGLP-N 179 (461)
Q Consensus 102 ~~v~lqLVSs~~~~~tg~~k~~l~~w~~~~~~~~~~~~~y~v~f~v~~~fG~pgAi~V~n~h-~~e~fl~~Itl~~~p-~ 179 (461)
.+|+|+||+++.+ +++..|.+ .| ..|+ +++|.++ ++++|++-.|.|.|.. .+.|||+.|+|++ | +
T Consensus 19 ~~V~i~L~G~~g~----S~~~~L~~---~F-~~G~-~d~F~v~---~~dLG~l~~i~l~n~g~~~~Wf~~~V~V~~-~~g 85 (109)
T cd02899 19 GTIEITLLGSSGR----SNPKTLSQ---GF-YPGS-LKRIRFR---AADVGDINAIILSNTALNDPWYCDYVRIKS-EDG 85 (109)
T ss_pred ceEEEEEEECCCC----cCCEEccC---cc-CCCc-eEEEEEC---ccccCceEEEEEECCCCCCCceeeEEEEEC-CCC
Confidence 4599999999875 44444443 34 3344 6688776 7999999999998886 7789999999986 7 6
Q ss_pred CcEEEeeCccccCC
Q 012542 180 GPVNVTCNSWLHSK 193 (461)
Q Consensus 180 ~~v~FpCnSWV~~~ 193 (461)
..++||||+|+..-
T Consensus 86 ~~~~Fpc~rWla~~ 99 (109)
T cd02899 86 KVFAFNVKRWIGYP 99 (109)
T ss_pred CEEEEEcceeeCCc
Confidence 78889999999753
No 10
>cd01753 PLAT_LOX PLAT domain of 12/15-lipoxygenase. As a unique subfamily of the mammalian lipoxygenases, they catalyze enzymatic lipid peroxidation in complex biological structures via direct dioxygenation of phospholipids and cholesterol esters of biomembranes and plasma lipoproteins. Both types of enzymes are cytosolic but need this domain to access their sequestered membrane or micelle bound substrates.
Probab=98.64 E-value=1.5e-07 Score=82.61 Aligned_cols=85 Identities=16% Similarity=0.341 Sum_probs=63.5
Q ss_pred CcEEEEEEeeecCCCCCCCcccccccccccCCCCCCceeEEEEEeccCCCCceeEEEEEecC---CCceEEeEEEEecCC
Q 012542 102 KSLLLELVSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEH---HKEMYLKDIVLDGLP 178 (461)
Q Consensus 102 ~~v~lqLVSs~~~~~tg~~k~~l~~w~~~~~~~~~~~~~y~v~f~v~~~fG~pgAi~V~n~h---~~e~fl~~Itl~~~p 178 (461)
-+|+|+|++++.+ ++...|......+ ..++ .++|.++ .+.++|++-.|.|+... ...|||+.|+|++..
T Consensus 19 a~V~i~l~G~~g~----S~~~~L~~~~~~F-erG~-~d~F~v~--~~~~lG~l~~i~i~~d~~g~~~~W~l~~V~V~~~~ 90 (113)
T cd01753 19 DYIYLTLVGTAGE----SEKQLLDRPGYDF-ERGA-VDEYKVK--VPEDLGELLLVRLRKRKYLLFDAWFCNYITVTGPG 90 (113)
T ss_pred cEEEEEEEECCCc----ccCEEcCCCCCcc-CCCC-eeEEEEe--cccCCCCcEEEEEEECCCCCCCCeeecEEEEEcCC
Confidence 3599999998876 3444454433334 3333 5677777 57899999999999875 789999999998543
Q ss_pred CCcEEEeeCccccCCC
Q 012542 179 NGPVNVTCNSWLHSKH 194 (461)
Q Consensus 179 ~~~v~FpCnSWV~~~~ 194 (461)
+..++||||+|+....
T Consensus 91 ~~~~~F~c~rWl~~~~ 106 (113)
T cd01753 91 GDEYHFPCYRWIEGYG 106 (113)
T ss_pred CCEEEEEhHHeECCCC
Confidence 6678999999997754
No 11
>cd01756 PLAT_repeat PLAT/LH2 domain repeats of family of proteins with unknown function. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=98.55 E-value=8.2e-07 Score=78.22 Aligned_cols=93 Identities=16% Similarity=0.380 Sum_probs=67.5
Q ss_pred CcEEEEEEeeecCCCCCCCccccccc--ccccCCCCCCceeEEEEEeccCCCCceeEEEEEecC---CCceEEeEEEEec
Q 012542 102 KSLLLELVSAELDPKTGLDKSTIQDY--ARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEH---HKEMYLKDIVLDG 176 (461)
Q Consensus 102 ~~v~lqLVSs~~~~~tg~~k~~l~~w--~~~~~~~~~~~~~y~v~f~v~~~fG~pgAi~V~n~h---~~e~fl~~Itl~~ 176 (461)
.+|+|+|+++... ++...|.++ ...+ ..++ ..+|.++. .++|++-.|.|+... ...|||+.|+|..
T Consensus 19 a~V~i~L~G~~g~----s~~~~L~~~~~~~~F-erGs-~d~F~i~~---~~lG~l~~i~i~~d~~g~~~~W~~~~V~V~~ 89 (120)
T cd01756 19 ANVFITLYGENGD----TGKRKLKKSNNKNKF-ERGQ-TDKFTVEA---VDLGKLKKIRIGHDNSGLGAGWFLDKVEIRE 89 (120)
T ss_pred cEEEEEEEeCCCc----cccEEccCCCcCCcc-cCCC-eEEEEEEe---cCCCCeEEEEEEECCCCCCCCcEEeEEEEEE
Confidence 4599999987765 445556654 2233 2333 56787774 799999999999875 5789999999986
Q ss_pred CC-CCcEEEeeCccccCCCCC-CcceEEe
Q 012542 177 LP-NGPVNVTCNSWLHSKHDN-KQKRVFF 203 (461)
Q Consensus 177 ~p-~~~v~FpCnSWV~~~~~~-~~~RiFF 203 (461)
.. +..++|+||+|+...+.. ...|++.
T Consensus 90 ~~~~~~~~F~~~~Wl~~~~~dg~~~r~~~ 118 (120)
T cd01756 90 PGTGDEYTFPCNRWLDKDEDDGQIVRELY 118 (120)
T ss_pred CCCceEEEEEeCCccCCCCCCCEEEEEEE
Confidence 55 667899999999986542 2356654
No 12
>cd01752 PLAT_polycystin PLAT/LH2 domain of polycystin-1 like proteins. Polycystins are a large family of membrane proteins composed of multiple domains, present in fish, invertebrates, mammals, and humans that are widely expressed in various cell types and whose biological functions remain poorly defined. In human, mutations in polycystin-1 (PKD1) and polycystin-2 (PKD2) have been shown to be the cause for autosomal dominant polycystic kidney disease (ADPKD). The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.
Probab=98.39 E-value=2.4e-06 Score=75.35 Aligned_cols=93 Identities=19% Similarity=0.360 Sum_probs=64.2
Q ss_pred CcEEEEEEeeecCCCCCCCcccccccc-cccCCCCCCceeEEEEEeccCCCCceeEEEEEecC---CCceEEeEEEEecC
Q 012542 102 KSLLLELVSAELDPKTGLDKSTIQDYA-RKIGADGDGNMQYESEFEVPSGFGEIGAILVENEH---HKEMYLKDIVLDGL 177 (461)
Q Consensus 102 ~~v~lqLVSs~~~~~tg~~k~~l~~w~-~~~~~~~~~~~~y~v~f~v~~~fG~pgAi~V~n~h---~~e~fl~~Itl~~~ 177 (461)
-+|.|+|+++..+ +++..|.+.. ..+ ..++ ..+|.+. .+.++|++-.|.|..+. ...|||++|+|.+.
T Consensus 19 a~V~i~L~G~~g~----s~~~~L~~~~~~~F-~rG~-~~~f~i~--~~~dlG~l~~i~l~hd~~g~~~~W~l~~V~V~~~ 90 (120)
T cd01752 19 AKVTITLYGAEGE----SEPHHLRDPEKPIF-ERGS-VDSFLLT--TPFPLGELQSIRLWHDNSGLSPSWYLSRVIVRDL 90 (120)
T ss_pred cEEEEEEEeCCCC----cccEEcCCCCccce-eCCC-eeEEEec--CccCCCCccEEEEEECCCCCCCCeEEEEEEEEEC
Confidence 4599999998876 3344444322 223 2223 3456555 57899999999998664 67999999999864
Q ss_pred C-CCcEEEeeCccccCCCCC-CcceEE
Q 012542 178 P-NGPVNVTCNSWLHSKHDN-KQKRVF 202 (461)
Q Consensus 178 p-~~~v~FpCnSWV~~~~~~-~~~RiF 202 (461)
. +...+||||+|+...+.. .-.|+|
T Consensus 91 ~t~~~~~F~~~rWl~~~~~d~~~~r~~ 117 (120)
T cd01752 91 QTGKKWFFLCNDWLSVEEGDGTVERTF 117 (120)
T ss_pred CCCcEEEEEeCcEECCcCCCCEEEEEE
Confidence 4 667899999999876543 224444
No 13
>cd01757 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family. PLAT/LH2 domains consists of an eight stranded beta-barrel. In RabIP1 this domain may participate in lipid-mediated modulation of Rab6IP1's function via it's generally proposed function of mediating interaction with lipids or membrane bound proteins.
Probab=98.39 E-value=1.9e-06 Score=76.30 Aligned_cols=77 Identities=10% Similarity=0.224 Sum_probs=57.9
Q ss_pred CcEEEEEEeeecCCCCCCCcccccccccccCCCCCCceeEEEEEeccCCCCceeEEEEEecC---CCceEEeEEEEecCC
Q 012542 102 KSLLLELVSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEH---HKEMYLKDIVLDGLP 178 (461)
Q Consensus 102 ~~v~lqLVSs~~~~~tg~~k~~l~~w~~~~~~~~~~~~~y~v~f~v~~~fG~pgAi~V~n~h---~~e~fl~~Itl~~~p 178 (461)
.+|+|+|+++..+ +++..|++. .|++.+. +.++|++-.|.|+... ...|||+.|.|++.+
T Consensus 20 anV~i~L~G~~g~----s~~~~L~~~------------~f~~~v~-~~~LG~L~~irIwHDnsG~~~~Wfl~~V~V~d~~ 82 (114)
T cd01757 20 ANPWICVSGELGE----TPPLQIPKN------------SLEMTFD-CQNLGKLTTVQIGHDNSGLLAKWLVEYVMVRNEI 82 (114)
T ss_pred ceEEEEEEEcCCC----cCCEEecCC------------ceEEEEe-cCCcCCcEEEEEEECCCCCCCCeeeeEEEEEeCC
Confidence 3599999998865 444444311 2333332 4999999999999864 789999999999767
Q ss_pred -CCcEEEeeCccccCCCC
Q 012542 179 -NGPVNVTCNSWLHSKHD 195 (461)
Q Consensus 179 -~~~v~FpCnSWV~~~~~ 195 (461)
+..++||||+|+...+.
T Consensus 83 t~~~~~FpC~rWLa~~~~ 100 (114)
T cd01757 83 TGHTYKFPCGRWLGEGVD 100 (114)
T ss_pred CCCEEEEecCceecCCCC
Confidence 66899999999987654
No 14
>cd01754 PLAT_plant_stress PLAT/LH2 domain of plant-specific single domain protein family with unknown function. Many of its members are stress induced. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=98.28 E-value=6.2e-06 Score=74.48 Aligned_cols=86 Identities=9% Similarity=0.110 Sum_probs=61.6
Q ss_pred CcEEEEEEeeecCCCCCCCcccc-cccc-------cccCCCCCCceeEEEEEeccCCCCceeEEEEEecC---CCceEEe
Q 012542 102 KSLLLELVSAELDPKTGLDKSTI-QDYA-------RKIGADGDGNMQYESEFEVPSGFGEIGAILVENEH---HKEMYLK 170 (461)
Q Consensus 102 ~~v~lqLVSs~~~~~tg~~k~~l-~~w~-------~~~~~~~~~~~~y~v~f~v~~~fG~pgAi~V~n~h---~~e~fl~ 170 (461)
.+|+|+|++++.+ +++..+ ++|. ..| ..++ .++|.|+. +..+|++-.|.|+... ...|||.
T Consensus 19 anV~i~l~G~~G~----s~~~~l~~~~~~l~~~~~~~F-erG~-~d~F~v~~--~~~lG~l~~irI~HDn~G~~p~W~l~ 90 (129)
T cd01754 19 SRISLQIYDADGP----GLRIANLEAWGGLMGAGHDYF-ERGN-LDRFSGRG--PCLPSPPCWMNLTSDGTGNHPGWYVN 90 (129)
T ss_pred ceEEEEEEeCCCC----cccEEcccccccccccccccc-cCCC-ccEEEEEe--ccCCCCeEEEEEEECCCCCCCCcccC
Confidence 3599999988865 333233 2221 123 2334 57898884 7889999999999764 7799999
Q ss_pred EEEEecCC-C---CcEEEeeCccccCCCC
Q 012542 171 DIVLDGLP-N---GPVNVTCNSWLHSKHD 195 (461)
Q Consensus 171 ~Itl~~~p-~---~~v~FpCnSWV~~~~~ 195 (461)
+|+|++.. + ..++||||+|+...+.
T Consensus 91 ~V~V~d~~~~~~~~~~~F~c~rWLa~d~~ 119 (129)
T cd01754 91 YVEVTQAGQHAPCMQHLFAVEQWLATDES 119 (129)
T ss_pred EEEEEeCCCCCcCcEEEEEecEeccCCCC
Confidence 99998654 2 3799999999976654
No 15
>cd01755 PLAT_lipase PLAT/ LH2 domain present in connection with a lipase domain. This family contains two major subgroups, the lipoprotein lipase (LPL) and the pancreatic triglyceride lipase. LPL is a key enzyme in catabolism of plasma lipoprotein triglycerides (TGs). The central role of triglyceride lipases is in energy production. In general, PLAT/LH2 domain's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=71.91 E-value=47 Score=29.42 Aligned_cols=76 Identities=11% Similarity=0.141 Sum_probs=50.8
Q ss_pred cEEEEEEeeecCCCCCCCcccccccccccCCCCCCceeEEEEEeccCCCCceeEEEEEecC----------CCceEEeEE
Q 012542 103 SLLLELVSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEH----------HKEMYLKDI 172 (461)
Q Consensus 103 ~v~lqLVSs~~~~~tg~~k~~l~~w~~~~~~~~~~~~~y~v~f~v~~~fG~pgAi~V~n~h----------~~e~fl~~I 172 (461)
.|.|.|.++..+ ++.-.|.. ..+ .....|+.-+..+.++|.+-.|.++=+. ...||++.|
T Consensus 20 ~v~v~L~G~~g~----s~~~~l~~--~~~----~~g~~~sfli~t~~~lG~l~~v~~~~dn~~~~~~~~~~~p~~~~~~I 89 (120)
T cd01755 20 TFTVSLYGTKGE----TEQLPIVL--GEL----KPNKTYSFLIDTEVDIGDLLKVKFKWENNVINSNSGETLPKLGARKI 89 (120)
T ss_pred cEEEEEEcCCCC----cccEEEeC--Ccc----cCCCEEEEEEEcCCCccceEEEEEEEcCCCcccccccCCCcEEEEEE
Confidence 588888877755 33323321 011 1234666666679999999999987432 358999999
Q ss_pred EEecCCCCcEEEeeCc
Q 012542 173 VLDGLPNGPVNVTCNS 188 (461)
Q Consensus 173 tl~~~p~~~v~FpCnS 188 (461)
+|+....+....-|.+
T Consensus 90 ~Vq~get~~~~~FC~~ 105 (120)
T cd01755 90 RVKSGETQKKFTFCSQ 105 (120)
T ss_pred EEEECCCCCEEEEECC
Confidence 9987666666667876
No 16
>TIGR03124 ctirate_citX holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems.
Probab=49.34 E-value=8 Score=36.64 Aligned_cols=54 Identities=30% Similarity=0.473 Sum_probs=29.9
Q ss_pred eeccCCCChhHHHHHHHHHHHHhcCCCCCccccCeeeecccccCCCCCCCCCCCcccccCCCCCCCCCccC
Q 012542 207 LYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRCR 277 (461)
Q Consensus 207 ~yLP~eTP~~L~~lRe~EL~~lRGdG~GeRk~~DRIYdYdvYNDLG~PD~~~~l~RPvLGG~~~PYPRRcR 277 (461)
+|+--+.|+.-.|..-=+|++-- .-=|++|.|||+.-|. .+-|--|| +| ||||=
T Consensus 81 ~~~~v~~~a~~vK~~~i~iEe~h--------plGRL~DlDV~~~~g~-----~iSR~~lg---~~-~R~Cl 134 (165)
T TIGR03124 81 AFLVVDAPALELKRLMIKLEESH--------PLGRLWDIDVLDADGK-----SLSRTDLG---LP-PRKCL 134 (165)
T ss_pred EEEEeCCCHHHHHHHHHHHHhCC--------chhhheeheeecCCCC-----CcCHHHcC---CC-CCeee
Confidence 33444445444454444444432 1118999999964333 35576666 34 78873
No 17
>PF03802 CitX: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; InterPro: IPR005551 Members of this protein family are annotated as CitX, containing the CitX domain, the domain is also found in the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25 from EC), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems.; GO: 0051191 prosthetic group biosynthetic process
Probab=34.39 E-value=23 Score=33.50 Aligned_cols=49 Identities=27% Similarity=0.390 Sum_probs=29.5
Q ss_pred CCChhHHHHHHHHHHHHhcCCCCCccccCeeeecccccCCCCCCCCCCCcccccCCCCCCCCCccC
Q 012542 212 QTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRCR 277 (461)
Q Consensus 212 eTP~~L~~lRe~EL~~lRGdG~GeRk~~DRIYdYdvYNDLG~PD~~~~l~RPvLGG~~~PYPRRcR 277 (461)
+.++-..|..--+|++-- .+=|++|.|||+.-|.+ +.|.-||-. ||||=
T Consensus 88 ~~~a~~vK~~~i~iEe~h--------plGRL~DiDV~~~~g~~-----iSR~~lg~~----~R~Cl 136 (170)
T PF03802_consen 88 DGDAEEVKRIMIEIEESH--------PLGRLFDIDVLDPDGKQ-----ISREDLGLP----PRRCL 136 (170)
T ss_pred CCCHHHHHHHHHHHHccC--------cchheEEEeeecCCCCc-----cCHHHcCCC----CCccc
Confidence 334444455555555433 23389999999554444 557777752 67773
No 18
>PF11248 DUF3046: Protein of unknown function (DUF3046); InterPro: IPR021408 This family of proteins with unknown function appears to be restricted to Actinobacteria.
Probab=30.43 E-value=15 Score=29.80 Aligned_cols=22 Identities=23% Similarity=0.477 Sum_probs=19.5
Q ss_pred CCccHHHHhhhcCCCCCHHHhhC
Q 012542 439 SAITTELIEKEIGGMISVEEVYE 461 (461)
Q Consensus 439 saIT~e~Ie~~L~G~~TveeAl~ 461 (461)
-.|-.+|+-..|+| .|++|||+
T Consensus 20 ~~la~dhvL~~LGg-rT~~eAL~ 41 (63)
T PF11248_consen 20 RSLARDHVLSELGG-RTAAEALE 41 (63)
T ss_pred HHHHHhcchhhcCC-cCHHHHHH
Confidence 56788999999999 99999985
No 19
>PRK01392 citX 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA:apo-citrate lyase; Reviewed
Probab=28.33 E-value=22 Score=34.12 Aligned_cols=56 Identities=30% Similarity=0.402 Sum_probs=29.5
Q ss_pred eeccCCCChhHHHHHHHHHHHHhcCCCCCccccCeeeecccccCCCCCCCCCCCcccccCCCCCCCCCcc
Q 012542 207 LYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRC 276 (461)
Q Consensus 207 ~yLP~eTP~~L~~lRe~EL~~lRGdG~GeRk~~DRIYdYdvYNDLG~PD~~~~l~RPvLGG~~~PYPRRc 276 (461)
+|+--+.++.-.|..-=+|++-- .-=|++|.|||+--|.- +..+-|--||= =||||
T Consensus 87 ~~~~v~~~a~~vK~~~i~iEe~h--------plGRL~DiDV~~~~~~~--~~~iSR~~lg~----p~R~C 142 (180)
T PRK01392 87 GYLAIALPARDLKLAMIALEQSH--------PLGRLWDLDVLTLEGEI--PHQLSRTDLGL----PPRRC 142 (180)
T ss_pred EEEEeCCCHHHHHHHHHHHHhcC--------cchhheeeeeeccCCCC--cCccCHHHcCC----CCCee
Confidence 44445556555555555555543 11189999999411110 12255666663 16776
No 20
>PF06232 ATS3: Embryo-specific protein 3, (ATS3); InterPro: IPR010417 This is a family of plant seed-specific proteins identified in Arabidopsis thaliana (Mouse-ear cress). ATS3 is expressed in a pattern similar to the Arabidopsis seed storage protein genes [].
Probab=26.01 E-value=2.2e+02 Score=26.15 Aligned_cols=52 Identities=13% Similarity=0.146 Sum_probs=38.4
Q ss_pred eeEEEEEeccCCCCceeEEEEEecCCCceEEeEEEEecCCCCcEEEeeCccccCC
Q 012542 139 MQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSK 193 (461)
Q Consensus 139 ~~y~v~f~v~~~fG~pgAi~V~n~h~~e~fl~~Itl~~~p~~~v~FpCnSWV~~~ 193 (461)
++|+|. -+. ++.+=-+.+.....+.|+.++|+|.+.-..+++|.-|.||-..
T Consensus 66 DtF~v~--G~C-~~~IC~lyL~r~G~dGW~Pe~V~Iy~~~~~~~~F~~~~~lp~~ 117 (125)
T PF06232_consen 66 DTFQVT--GPC-LYQICYLYLYRSGSDGWKPEWVQIYGSGSKPVTFYFNTFLPNG 117 (125)
T ss_pred ceeEee--ccc-CCcccEEEEEEccCCCCEeCeEEEEEcCCCCeEEECCCcCCCC
Confidence 577766 232 4466666666666789999999997644678999999999764
No 21
>KOG2080 consensus Uncharacterized conserved protein, contains DENN and RUN domains [Signal transduction mechanisms]
Probab=24.78 E-value=32 Score=40.46 Aligned_cols=47 Identities=11% Similarity=0.449 Sum_probs=35.8
Q ss_pred CCCCceeEEEEEecC---CCceEEeEEEEec-CCCCcEEEeeCccccCCCC
Q 012542 149 SGFGEIGAILVENEH---HKEMYLKDIVLDG-LPNGPVNVTCNSWLHSKHD 195 (461)
Q Consensus 149 ~~fG~pgAi~V~n~h---~~e~fl~~Itl~~-~p~~~v~FpCnSWV~~~~~ 195 (461)
.++|..-.+.|-... ...||++.|.|.. +-+.++-|||++|.-+..+
T Consensus 1020 kNLG~LtT~rIGHdnS~~~~kW~vEyV~vRNEiTG~TYKFPCGrw~G~ged 1070 (1295)
T KOG2080|consen 1020 KNLGILSTLRIGHQQSEKPVQWFLEYVLVRNEITGQTYKFPCGRWFGNGED 1070 (1295)
T ss_pred cccceeeeEEecccCCCcchHHHHHHhhhhceeccceeccccccccCCccc
Confidence 789998888885432 5689999997743 3367899999999876544
Done!