Query 012543
Match_columns 461
No_of_seqs 126 out of 1279
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 11:29:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012543.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012543hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 5.3E-68 1.8E-72 523.5 34.0 441 6-460 5-454 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 1.3E-62 4.3E-67 495.1 35.0 440 14-461 8-480 (482)
3 2vch_A Hydroquinone glucosyltr 100.0 9.2E-60 3.1E-64 472.6 42.5 442 9-460 1-469 (480)
4 2c1x_A UDP-glucose flavonoid 3 100.0 1.3E-60 4.4E-65 475.7 32.8 434 13-460 6-452 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 9.8E-57 3.3E-61 449.0 37.6 425 13-459 8-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 1.5E-44 5.1E-49 359.1 30.8 395 14-459 12-421 (424)
7 4amg_A Snogd; transferase, pol 100.0 9.8E-45 3.4E-49 357.6 26.6 358 13-456 21-397 (400)
8 1iir_A Glycosyltransferase GTF 100.0 1.2E-42 4.1E-47 344.2 22.6 376 15-458 1-399 (415)
9 3rsc_A CALG2; TDP, enediyne, s 100.0 8.5E-41 2.9E-45 331.1 28.2 389 6-460 12-414 (415)
10 1rrv_A Glycosyltransferase GTF 100.0 1.1E-41 3.6E-46 337.6 18.2 370 15-454 1-395 (416)
11 3ia7_A CALG4; glycosysltransfe 100.0 4.2E-39 1.4E-43 317.4 29.6 380 15-460 5-399 (402)
12 3h4t_A Glycosyltransferase GTF 100.0 2E-40 7E-45 326.8 20.0 363 15-460 1-383 (404)
13 2yjn_A ERYCIII, glycosyltransf 100.0 2.1E-39 7.2E-44 323.5 25.7 372 13-459 19-435 (441)
14 2iyf_A OLED, oleandomycin glyc 100.0 3.5E-38 1.2E-42 313.8 28.0 379 14-458 7-398 (430)
15 2p6p_A Glycosyl transferase; X 100.0 9.4E-38 3.2E-42 306.0 28.1 352 15-458 1-378 (384)
16 3oti_A CALG3; calicheamicin, T 100.0 3.8E-36 1.3E-40 296.0 23.4 356 12-458 18-396 (398)
17 4fzr_A SSFS6; structural genom 100.0 9.3E-37 3.2E-41 300.4 17.9 356 10-454 11-395 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 4.3E-34 1.5E-38 280.7 25.4 356 14-459 1-388 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 9.1E-33 3.1E-37 273.1 24.3 364 7-459 13-408 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 2.9E-29 9.8E-34 243.3 22.7 306 15-420 3-324 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 6.7E-27 2.3E-31 201.7 12.6 157 262-438 9-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 6.9E-21 2.3E-25 184.6 23.5 340 14-461 6-357 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.6 1.4E-14 4.9E-19 133.3 17.6 116 273-403 156-274 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 8.5E-16 2.9E-20 135.6 8.3 139 272-418 26-197 (224)
25 3fro_A GLGA glycogen synthase; 99.5 2.7E-11 9.3E-16 119.7 27.3 382 13-461 1-430 (439)
26 3c48_A Predicted glycosyltrans 99.4 7.9E-11 2.7E-15 116.5 27.8 368 13-460 19-424 (438)
27 3okp_A GDP-mannose-dependent a 99.4 8.9E-12 3E-16 121.4 20.6 346 13-461 3-379 (394)
28 2gek_A Phosphatidylinositol ma 99.4 6.9E-11 2.4E-15 115.6 21.5 113 333-460 262-382 (406)
29 2jjm_A Glycosyl transferase, g 99.3 2E-09 6.9E-14 104.8 29.6 350 15-460 16-384 (394)
30 1v4v_A UDP-N-acetylglucosamine 99.3 2.4E-11 8.2E-16 117.8 15.5 158 273-457 197-364 (376)
31 3dzc_A UDP-N-acetylglucosamine 99.3 1.8E-11 6.3E-16 119.3 13.5 349 10-460 21-396 (396)
32 3ot5_A UDP-N-acetylglucosamine 99.3 3.6E-11 1.2E-15 117.4 13.8 108 334-458 282-392 (403)
33 1vgv_A UDP-N-acetylglucosamine 99.3 7.1E-11 2.4E-15 114.7 15.1 162 273-460 204-375 (384)
34 2iw1_A Lipopolysaccharide core 99.2 1.1E-08 3.6E-13 98.7 29.1 148 273-435 194-353 (374)
35 2iuy_A Avigt4, glycosyltransfe 99.2 3.2E-10 1.1E-14 108.2 17.9 125 277-419 164-307 (342)
36 2r60_A Glycosyl transferase, g 99.2 1.4E-09 4.7E-14 109.6 22.2 113 333-460 334-458 (499)
37 3beo_A UDP-N-acetylglucosamine 99.1 1.4E-09 4.8E-14 105.1 16.7 161 273-459 204-374 (375)
38 2x6q_A Trehalose-synthase TRET 99.0 1.8E-07 6.3E-12 91.5 27.4 112 333-461 292-414 (416)
39 4hwg_A UDP-N-acetylglucosamine 98.9 5.2E-10 1.8E-14 108.3 4.3 342 16-458 11-374 (385)
40 3s28_A Sucrose synthase 1; gly 98.9 6.3E-08 2.2E-12 101.6 19.2 171 273-460 570-768 (816)
41 3oy2_A Glycosyltransferase B73 98.7 1.7E-06 5.8E-11 84.5 22.8 166 274-460 183-389 (413)
42 1rzu_A Glycogen synthase 1; gl 98.6 9.3E-07 3.2E-11 88.4 18.2 163 275-460 291-474 (485)
43 2qzs_A Glycogen synthase; glyc 98.6 3.1E-06 1.1E-10 84.6 20.3 163 274-460 291-475 (485)
44 2f9f_A First mannosyl transfer 98.5 2E-07 7E-12 79.7 7.9 131 276-420 24-162 (177)
45 2hy7_A Glucuronosyltransferase 98.4 3.7E-05 1.3E-09 74.9 21.0 73 334-420 265-352 (406)
46 2xci_A KDO-transferase, 3-deox 98.2 8.8E-05 3E-09 71.3 19.3 96 336-438 262-364 (374)
47 3vue_A GBSS-I, granule-bound s 98.2 0.00023 7.8E-09 71.8 22.2 167 274-461 326-511 (536)
48 2vsy_A XCC0866; transferase, g 98.0 0.00019 6.6E-09 73.0 17.1 116 334-460 434-558 (568)
49 3qhp_A Type 1 capsular polysac 97.9 3.2E-05 1.1E-09 64.9 9.1 145 275-437 2-158 (166)
50 4gyw_A UDP-N-acetylglucosamine 97.9 0.00023 7.7E-09 74.4 17.3 175 272-460 520-704 (723)
51 2bfw_A GLGA glycogen synthase; 97.7 0.0003 1E-08 60.8 12.1 78 335-421 96-182 (200)
52 3rhz_A GTF3, nucleotide sugar 97.6 0.00012 4E-09 69.2 8.2 111 335-458 215-337 (339)
53 3q3e_A HMW1C-like glycosyltran 97.6 0.00073 2.5E-08 67.9 13.2 138 274-420 440-588 (631)
54 1psw_A ADP-heptose LPS heptosy 97.4 0.0023 7.7E-08 60.6 14.6 103 15-141 1-106 (348)
55 3tov_A Glycosyl transferase fa 97.4 0.0034 1.1E-07 59.5 14.8 104 14-141 8-115 (349)
56 2gt1_A Lipopolysaccharide hept 95.8 0.072 2.4E-06 49.6 11.6 130 273-420 177-322 (326)
57 2x0d_A WSAF; GT4 family, trans 95.4 0.0093 3.2E-07 57.9 3.8 83 335-429 296-385 (413)
58 3ty2_A 5'-nucleotidase SURE; s 93.5 0.24 8.2E-06 43.9 8.0 44 10-55 7-50 (261)
59 1uqt_A Alpha, alpha-trehalose- 92.6 0.37 1.3E-05 47.5 8.8 105 339-460 337-453 (482)
60 3t5t_A Putative glycosyltransf 91.0 2.1 7.1E-05 42.1 12.1 109 335-459 353-471 (496)
61 2phj_A 5'-nucleotidase SURE; S 89.6 4.1 0.00014 35.9 11.5 110 15-145 2-128 (251)
62 1j9j_A Stationary phase surviV 87.6 6.6 0.00023 34.5 11.5 110 15-144 1-128 (247)
63 1l5x_A SurviVal protein E; str 87.5 4.6 0.00016 36.2 10.7 110 15-145 1-128 (280)
64 2e6c_A 5'-nucleotidase SURE; S 86.6 8.9 0.0003 33.6 11.7 108 15-144 1-129 (244)
65 2wqk_A 5'-nucleotidase SURE; S 84.4 5.6 0.00019 35.1 9.5 109 16-145 3-128 (251)
66 3vot_A L-amino acid ligase, BL 84.3 8.8 0.0003 36.8 11.9 36 11-51 2-37 (425)
67 1kjn_A MTH0777; hypotethical p 81.7 1.8 6E-05 34.4 4.5 41 12-52 4-46 (157)
68 2v4n_A Multifunctional protein 80.0 14 0.00047 32.6 10.2 39 15-55 2-40 (254)
69 3nb0_A Glycogen [starch] synth 80.0 5.7 0.00019 40.5 8.6 40 340-381 499-551 (725)
70 2x0d_A WSAF; GT4 family, trans 79.3 0.96 3.3E-05 43.5 2.8 39 13-51 45-88 (413)
71 1xmp_A PURE, phosphoribosylami 78.5 25 0.00084 28.6 10.3 142 273-443 10-165 (170)
72 1g5t_A COB(I)alamin adenosyltr 77.7 6.9 0.00024 33.0 7.3 99 13-126 27-131 (196)
73 1o4v_A Phosphoribosylaminoimid 75.8 32 0.0011 28.3 12.2 142 273-443 12-165 (183)
74 3zqu_A Probable aromatic acid 75.7 3.7 0.00013 35.1 5.2 37 14-51 4-40 (209)
75 3qxc_A Dethiobiotin synthetase 75.3 23 0.00077 31.0 10.4 36 14-49 20-57 (242)
76 3lqk_A Dipicolinate synthase s 73.9 5.1 0.00018 34.0 5.6 43 13-56 6-49 (201)
77 2yxb_A Coenzyme B12-dependent 73.9 2.8 9.7E-05 34.2 3.9 39 12-50 16-54 (161)
78 1ccw_A Protein (glutamate muta 73.6 4.4 0.00015 32.0 4.9 37 14-50 3-39 (137)
79 4dzz_A Plasmid partitioning pr 69.7 16 0.00056 30.4 8.0 36 16-51 3-39 (206)
80 3l7i_A Teichoic acid biosynthe 68.3 4.2 0.00014 42.3 4.6 108 340-458 605-718 (729)
81 3qjg_A Epidermin biosynthesis 67.2 6.6 0.00023 32.5 4.7 38 15-53 6-43 (175)
82 2i2x_B MTAC, methyltransferase 67.2 8.3 0.00028 34.2 5.7 40 12-51 121-160 (258)
83 1y80_A Predicted cobalamin bin 66.6 6.8 0.00023 33.4 4.9 39 13-51 87-125 (210)
84 1sbz_A Probable aromatic acid 66.6 7.1 0.00024 33.0 4.8 36 15-51 1-37 (197)
85 3mcu_A Dipicolinate synthase, 66.5 5.5 0.00019 34.0 4.1 39 14-53 5-44 (207)
86 3pdi_B Nitrogenase MOFE cofact 63.2 24 0.00081 34.2 8.5 88 14-143 313-400 (458)
87 3l4e_A Uncharacterized peptida 62.9 19 0.00064 30.6 6.9 45 264-308 18-62 (206)
88 2g1u_A Hypothetical protein TM 62.0 9.4 0.00032 30.5 4.7 40 7-51 11-51 (155)
89 3ezx_A MMCP 1, monomethylamine 61.5 9.7 0.00033 32.7 4.9 39 13-51 91-129 (215)
90 4b4o_A Epimerase family protei 61.3 8 0.00027 34.8 4.6 32 15-50 1-32 (298)
91 1mvl_A PPC decarboxylase athal 61.0 10 0.00035 32.4 4.8 40 13-54 18-57 (209)
92 2r8r_A Sensor protein; KDPD, P 60.7 12 0.00041 32.4 5.2 39 13-51 5-43 (228)
93 2p90_A Hypothetical protein CG 60.2 66 0.0023 29.3 10.5 149 273-437 101-266 (319)
94 2i2c_A Probable inorganic poly 60.1 5.2 0.00018 35.8 3.0 53 350-420 35-93 (272)
95 2ejb_A Probable aromatic acid 59.7 15 0.00053 30.7 5.6 37 15-52 2-38 (189)
96 3llv_A Exopolyphosphatase-rela 59.0 6.4 0.00022 30.8 3.1 33 14-51 6-38 (141)
97 2q5c_A NTRC family transcripti 58.0 18 0.0006 30.5 5.8 108 26-145 36-169 (196)
98 2q5c_A NTRC family transcripti 56.4 35 0.0012 28.6 7.4 30 350-382 51-80 (196)
99 1p3y_1 MRSD protein; flavoprot 55.8 8.8 0.0003 32.3 3.5 37 14-51 8-44 (194)
100 1id1_A Putative potassium chan 55.8 9.7 0.00033 30.3 3.7 33 14-51 3-35 (153)
101 4b4k_A N5-carboxyaminoimidazol 54.4 89 0.003 25.6 10.2 142 273-443 21-176 (181)
102 2b8t_A Thymidine kinase; deoxy 54.3 75 0.0026 27.2 9.4 37 16-52 13-50 (223)
103 1u11_A PURE (N5-carboxyaminoim 53.9 92 0.0031 25.6 11.1 142 274-444 21-176 (182)
104 2wam_A RV2714, conserved hypot 52.6 93 0.0032 28.7 10.1 144 274-435 142-304 (351)
105 1g63_A Epidermin modifying enz 52.5 12 0.00043 31.0 3.9 39 15-54 3-41 (181)
106 3s40_A Diacylglycerol kinase; 51.5 20 0.00067 32.5 5.5 83 274-381 10-98 (304)
107 3mc3_A DSRE/DSRF-like family p 51.5 20 0.00068 28.0 4.8 38 14-51 15-55 (134)
108 1yt5_A Inorganic polyphosphate 51.3 8.4 0.00029 34.1 2.8 53 350-420 41-96 (258)
109 1qzu_A Hypothetical protein MD 50.5 12 0.00041 31.8 3.5 42 13-55 18-60 (206)
110 2iz6_A Molybdenum cofactor car 48.7 18 0.00062 29.8 4.3 75 339-419 94-173 (176)
111 3lp6_A Phosphoribosylaminoimid 48.7 1.1E+02 0.0037 25.0 11.0 139 274-441 7-157 (174)
112 2gk4_A Conserved hypothetical 47.3 25 0.00087 30.4 5.1 26 25-52 28-53 (232)
113 1lss_A TRK system potassium up 46.5 18 0.00062 27.8 3.9 32 14-50 4-35 (140)
114 2lnd_A De novo designed protei 46.5 18 0.00063 24.9 3.2 48 371-419 50-100 (112)
115 1qkk_A DCTD, C4-dicarboxylate 46.1 50 0.0017 25.6 6.6 63 371-438 74-136 (155)
116 3kuu_A Phosphoribosylaminoimid 45.8 1.2E+02 0.0042 24.7 10.3 142 274-444 12-167 (174)
117 2vo1_A CTP synthase 1; pyrimid 45.8 22 0.00075 31.4 4.4 38 14-51 22-62 (295)
118 3s2u_A UDP-N-acetylglucosamine 45.5 31 0.001 32.1 5.9 38 274-313 3-40 (365)
119 3n7t_A Macrophage binding prot 45.3 40 0.0014 29.4 6.2 37 15-51 10-57 (247)
120 2ywx_A Phosphoribosylaminoimid 45.0 1.2E+02 0.004 24.3 10.9 131 277-441 2-145 (157)
121 3czc_A RMPB; alpha/beta sandwi 44.9 21 0.00071 26.8 3.8 43 6-48 10-54 (110)
122 3fwz_A Inner membrane protein 44.7 17 0.00059 28.3 3.5 33 14-51 7-39 (140)
123 1p9o_A Phosphopantothenoylcyst 44.2 19 0.00064 32.9 4.0 23 30-52 67-89 (313)
124 3auf_A Glycinamide ribonucleot 44.0 1.3E+02 0.0044 25.8 9.2 105 13-145 21-132 (229)
125 3u7q_B Nitrogenase molybdenum- 44.0 1.3E+02 0.0045 29.5 10.4 33 14-51 364-396 (523)
126 1wcv_1 SOJ, segregation protei 43.7 20 0.00069 31.4 4.1 39 13-51 5-44 (257)
127 3qjg_A Epidermin biosynthesis 43.2 98 0.0033 25.3 7.9 114 274-398 6-142 (175)
128 2pju_A Propionate catabolism o 42.6 18 0.00061 31.3 3.4 29 351-382 64-92 (225)
129 3eag_A UDP-N-acetylmuramate:L- 42.4 26 0.00089 32.1 4.8 33 14-50 4-36 (326)
130 3dfz_A SIRC, precorrin-2 dehyd 41.7 53 0.0018 28.2 6.3 146 267-439 26-185 (223)
131 3afo_A NADH kinase POS5; alpha 41.5 15 0.00052 34.6 3.0 60 343-420 107-171 (388)
132 2bon_A Lipid kinase; DAG kinas 41.5 45 0.0015 30.5 6.3 80 275-381 32-119 (332)
133 3kjh_A CO dehydrogenase/acetyl 41.2 20 0.00068 30.9 3.7 37 15-51 1-37 (254)
134 1kjq_A GART 2, phosphoribosylg 40.6 25 0.00086 33.0 4.5 40 6-51 4-43 (391)
135 2w36_A Endonuclease V; hypoxan 40.5 43 0.0015 28.7 5.4 32 114-145 102-140 (225)
136 3qvl_A Putative hydantoin race 40.3 1.7E+02 0.0058 25.3 9.5 37 15-51 2-39 (245)
137 4dll_A 2-hydroxy-3-oxopropiona 40.3 32 0.0011 31.3 5.1 33 13-50 30-62 (320)
138 1f0y_A HCDH, L-3-hydroxyacyl-C 40.0 19 0.00064 32.6 3.3 40 5-50 7-46 (302)
139 2qv7_A Diacylglycerol kinase D 39.6 32 0.0011 31.6 5.0 81 276-380 28-114 (337)
140 3ucx_A Short chain dehydrogena 39.6 40 0.0014 29.5 5.4 41 7-50 3-43 (264)
141 1qgu_B Protein (nitrogenase mo 39.5 2E+02 0.0067 28.2 10.8 33 14-51 360-392 (519)
142 1nn5_A Similar to deoxythymidy 39.0 37 0.0013 28.4 5.0 45 6-50 1-45 (215)
143 3h4t_A Glycosyltransferase GTF 39.0 1.9E+02 0.0064 26.9 10.5 89 15-142 221-310 (404)
144 2hy5_A Putative sulfurtransfer 38.7 43 0.0015 25.7 4.9 37 17-53 4-43 (130)
145 2ywr_A Phosphoribosylglycinami 38.7 1.1E+02 0.0038 25.9 7.9 103 15-145 2-111 (216)
146 2qs7_A Uncharacterized protein 38.2 40 0.0014 26.6 4.6 36 16-51 9-45 (144)
147 1dhr_A Dihydropteridine reduct 38.1 35 0.0012 29.4 4.7 35 14-51 6-40 (241)
148 2h31_A Multifunctional protein 38.1 2.7E+02 0.0091 26.4 11.1 139 273-440 264-412 (425)
149 2hmt_A YUAA protein; RCK, KTN, 38.0 20 0.00068 27.7 2.9 32 15-51 7-38 (144)
150 3zzm_A Bifunctional purine bio 38.0 14 0.00047 35.9 2.1 100 13-125 8-112 (523)
151 3iqw_A Tail-anchored protein t 37.9 27 0.00092 32.2 4.1 40 12-51 13-53 (334)
152 1jx7_A Hypothetical protein YC 37.5 35 0.0012 25.4 4.1 38 16-53 3-45 (117)
153 2r85_A PURP protein PF1517; AT 37.4 29 0.001 31.5 4.4 32 14-51 2-33 (334)
154 3av3_A Phosphoribosylglycinami 37.3 1.6E+02 0.0053 24.9 8.6 103 15-145 4-113 (212)
155 3lrx_A Putative hydrogenase; a 36.2 35 0.0012 27.3 4.1 35 14-51 23-57 (158)
156 3rg8_A Phosphoribosylaminoimid 36.0 1.7E+02 0.0058 23.5 10.6 137 275-441 3-150 (159)
157 3bul_A Methionine synthase; tr 35.9 35 0.0012 34.0 4.7 39 13-51 97-135 (579)
158 4hb9_A Similarities with proba 35.7 26 0.00088 32.8 3.7 31 15-50 2-32 (412)
159 3t7c_A Carveol dehydrogenase; 35.6 46 0.0016 29.8 5.3 43 5-50 18-60 (299)
160 3ug7_A Arsenical pump-driving 35.5 43 0.0015 31.0 5.1 39 14-52 25-64 (349)
161 3uve_A Carveol dehydrogenase ( 35.5 46 0.0016 29.5 5.2 41 7-50 3-43 (286)
162 4hn9_A Iron complex transport 34.8 33 0.0011 31.4 4.2 39 100-145 108-146 (335)
163 2an1_A Putative kinase; struct 34.7 15 0.0005 33.1 1.7 32 347-380 60-95 (292)
164 1mio_B Nitrogenase molybdenum 34.3 1.7E+02 0.0058 28.1 9.4 26 114-142 384-409 (458)
165 2c5m_A CTP synthase; cytidine 34.3 35 0.0012 29.9 3.8 38 13-50 21-61 (294)
166 2a3d_A Protein (de novo three- 34.1 44 0.0015 21.2 3.3 31 424-458 5-35 (73)
167 3goc_A Endonuclease V; alpha-b 34.0 44 0.0015 28.9 4.4 32 114-145 106-144 (237)
168 2h78_A Hibadh, 3-hydroxyisobut 34.0 33 0.0011 30.8 4.0 32 14-50 3-34 (302)
169 3pfn_A NAD kinase; structural 33.8 14 0.00049 34.4 1.5 33 344-378 102-138 (365)
170 2lpm_A Two-component response 33.7 30 0.001 26.5 3.1 30 114-143 52-86 (123)
171 3md9_A Hemin-binding periplasm 33.5 39 0.0013 29.3 4.3 37 100-143 51-89 (255)
172 3e8x_A Putative NAD-dependent 33.5 46 0.0016 28.3 4.7 35 13-51 20-54 (236)
173 3k9g_A PF-32 protein; ssgcid, 33.4 33 0.0011 30.0 3.9 42 9-51 22-64 (267)
174 3tzq_B Short-chain type dehydr 33.2 52 0.0018 28.9 5.2 42 7-51 3-44 (271)
175 1u0t_A Inorganic polyphosphate 32.9 14 0.00047 33.7 1.2 32 347-380 72-107 (307)
176 2d1p_A TUSD, hypothetical UPF0 32.9 72 0.0025 25.0 5.3 36 16-51 15-53 (140)
177 2jk1_A HUPR, hydrogenase trans 32.7 87 0.003 23.5 5.9 62 371-436 71-132 (139)
178 3foj_A Uncharacterized protein 32.7 80 0.0027 22.6 5.3 34 13-50 55-88 (100)
179 4eg0_A D-alanine--D-alanine li 32.5 69 0.0024 28.9 6.0 37 14-50 13-53 (317)
180 4id9_A Short-chain dehydrogena 32.5 35 0.0012 31.2 4.0 37 11-51 16-52 (347)
181 3i4f_A 3-oxoacyl-[acyl-carrier 32.5 44 0.0015 29.1 4.5 34 14-50 6-39 (264)
182 3gl9_A Response regulator; bet 32.4 66 0.0023 23.7 5.0 41 98-145 36-85 (122)
183 3ftp_A 3-oxoacyl-[acyl-carrier 32.2 69 0.0023 28.1 5.8 43 5-50 18-60 (270)
184 3obb_A Probable 3-hydroxyisobu 32.1 46 0.0016 30.0 4.6 29 16-49 5-33 (300)
185 3qrx_B Melittin; calcium-bindi 31.7 17 0.00059 18.7 0.9 17 361-377 1-17 (26)
186 3gpi_A NAD-dependent epimerase 31.7 56 0.0019 28.8 5.1 46 14-68 3-48 (286)
187 3oow_A Phosphoribosylaminoimid 31.6 2E+02 0.007 23.2 11.6 142 274-444 5-160 (166)
188 2etv_A Iron(III) ABC transport 31.6 34 0.0012 31.6 3.7 36 101-143 89-125 (346)
189 1tvm_A PTS system, galactitol- 31.5 1.3E+02 0.0046 22.3 6.5 38 13-50 20-58 (113)
190 1mio_A Nitrogenase molybdenum 31.5 1.7E+02 0.0058 28.8 8.9 26 114-142 455-480 (533)
191 4gbj_A 6-phosphogluconate dehy 31.3 65 0.0022 28.9 5.5 29 16-49 7-35 (297)
192 1pno_A NAD(P) transhydrogenase 31.2 50 0.0017 26.7 3.9 36 14-51 23-63 (180)
193 1iow_A DD-ligase, DDLB, D-ALA\ 30.9 61 0.0021 28.8 5.3 38 14-51 2-43 (306)
194 3f67_A Putative dienelactone h 30.9 58 0.002 27.2 5.0 36 15-50 32-67 (241)
195 3fgn_A Dethiobiotin synthetase 30.7 51 0.0017 28.9 4.5 38 12-49 23-62 (251)
196 3is3_A 17BETA-hydroxysteroid d 30.7 70 0.0024 28.0 5.6 44 4-50 7-50 (270)
197 3svt_A Short-chain type dehydr 30.6 59 0.002 28.7 5.1 42 6-50 2-43 (281)
198 1d4o_A NADP(H) transhydrogenas 30.4 52 0.0018 26.7 3.9 36 14-51 22-62 (184)
199 3dfu_A Uncharacterized protein 30.4 33 0.0011 29.7 3.2 33 13-50 5-37 (232)
200 3trh_A Phosphoribosylaminoimid 30.3 2.2E+02 0.0075 23.1 10.9 139 274-441 6-158 (169)
201 2ew2_A 2-dehydropantoate 2-red 30.1 36 0.0012 30.6 3.6 32 14-50 3-34 (316)
202 2r6j_A Eugenol synthase 1; phe 30.0 44 0.0015 30.0 4.2 32 16-51 13-44 (318)
203 3lyu_A Putative hydrogenase; t 30.0 60 0.0021 25.4 4.5 33 14-48 18-50 (142)
204 3kkl_A Probable chaperone prot 30.0 83 0.0028 27.3 5.8 37 15-51 4-51 (244)
205 3rfo_A Methionyl-tRNA formyltr 29.9 66 0.0022 29.3 5.2 35 12-51 2-36 (317)
206 3hn2_A 2-dehydropantoate 2-red 29.8 45 0.0015 30.2 4.2 32 15-51 3-34 (312)
207 3l4b_C TRKA K+ channel protien 29.7 24 0.00081 30.0 2.1 32 15-51 1-32 (218)
208 2vsy_A XCC0866; transferase, g 29.7 57 0.0019 32.2 5.3 40 12-51 203-246 (568)
209 3r6d_A NAD-dependent epimerase 29.6 56 0.0019 27.4 4.6 33 16-51 6-39 (221)
210 2l2q_A PTS system, cellobiose- 29.6 53 0.0018 24.3 3.9 36 14-49 4-39 (109)
211 2a33_A Hypothetical protein; s 29.6 78 0.0027 26.9 5.3 37 13-49 12-52 (215)
212 3kcn_A Adenylate cyclase homol 29.6 1E+02 0.0035 23.6 5.9 48 371-420 75-123 (151)
213 3g0o_A 3-hydroxyisobutyrate de 29.5 31 0.001 31.1 3.0 33 13-50 6-38 (303)
214 3ew7_A LMO0794 protein; Q8Y8U8 29.5 42 0.0014 28.0 3.7 33 15-51 1-33 (221)
215 3alj_A 2-methyl-3-hydroxypyrid 29.4 38 0.0013 31.5 3.7 42 1-50 1-42 (379)
216 3sbx_A Putative uncharacterize 29.4 88 0.003 26.0 5.5 37 12-49 11-51 (189)
217 3qvo_A NMRA family protein; st 29.3 87 0.003 26.6 5.8 34 15-51 23-57 (236)
218 1eiw_A Hypothetical protein MT 29.3 42 0.0014 25.2 3.2 65 348-419 36-109 (111)
219 2q8p_A Iron-regulated surface 29.2 44 0.0015 29.1 3.9 38 101-145 53-91 (260)
220 3end_A Light-independent proto 29.1 55 0.0019 29.3 4.7 38 14-51 41-78 (307)
221 3eme_A Rhodanese-like domain p 29.0 75 0.0026 22.9 4.6 34 13-50 55-88 (103)
222 3ors_A N5-carboxyaminoimidazol 28.9 2.3E+02 0.0078 22.8 11.4 139 274-441 3-155 (163)
223 4e08_A DJ-1 beta; flavodoxin-l 28.9 1E+02 0.0035 25.2 6.0 40 7-51 2-41 (190)
224 3vps_A TUNA, NAD-dependent epi 28.9 41 0.0014 30.1 3.8 34 14-51 7-40 (321)
225 3nyw_A Putative oxidoreductase 28.8 44 0.0015 29.0 3.8 34 14-50 6-39 (250)
226 3q9l_A Septum site-determining 28.8 56 0.0019 28.2 4.6 37 16-52 3-41 (260)
227 3doj_A AT3G25530, dehydrogenas 28.7 46 0.0016 30.1 4.0 33 13-50 20-52 (310)
228 3to5_A CHEY homolog; alpha(5)b 28.7 68 0.0023 24.8 4.5 33 114-146 56-97 (134)
229 2r7a_A Bacterial heme binding 28.7 52 0.0018 28.5 4.3 37 100-143 51-89 (256)
230 1ks9_A KPA reductase;, 2-dehyd 28.7 40 0.0014 29.8 3.6 31 15-50 1-31 (291)
231 3l77_A Short-chain alcohol deh 28.7 64 0.0022 27.4 4.8 33 15-50 2-34 (235)
232 3tsc_A Putative oxidoreductase 28.5 69 0.0024 28.1 5.1 41 7-50 3-43 (277)
233 2d1p_B TUSC, hypothetical UPF0 28.5 98 0.0033 23.2 5.3 37 17-53 5-43 (119)
234 1zi8_A Carboxymethylenebutenol 28.3 70 0.0024 26.6 5.0 37 14-50 27-63 (236)
235 3qua_A Putative uncharacterize 28.2 99 0.0034 25.9 5.6 43 6-49 14-60 (199)
236 1u7z_A Coenzyme A biosynthesis 28.1 68 0.0023 27.5 4.7 22 30-51 36-57 (226)
237 3i83_A 2-dehydropantoate 2-red 28.1 45 0.0015 30.3 3.8 32 15-51 3-34 (320)
238 3lyh_A Cobalamin (vitamin B12) 28.1 1.7E+02 0.0059 21.9 6.8 37 273-309 5-41 (126)
239 3hwr_A 2-dehydropantoate 2-red 28.0 41 0.0014 30.5 3.6 31 13-48 18-48 (318)
240 2fsv_C NAD(P) transhydrogenase 27.9 59 0.002 26.9 3.9 36 14-51 46-86 (203)
241 2raf_A Putative dinucleotide-b 27.9 45 0.0015 28.1 3.6 32 14-50 19-50 (209)
242 4e5v_A Putative THUA-like prot 27.7 64 0.0022 28.8 4.6 39 12-51 2-43 (281)
243 3ic5_A Putative saccharopine d 27.6 51 0.0017 24.1 3.5 32 15-51 6-38 (118)
244 3egc_A Putative ribose operon 27.5 3E+02 0.01 23.7 9.7 40 11-50 5-46 (291)
245 1pzg_A LDH, lactate dehydrogen 27.5 33 0.0011 31.5 2.8 38 8-50 3-41 (331)
246 3psh_A Protein HI_1472; substr 27.4 55 0.0019 29.6 4.4 37 101-144 77-114 (326)
247 1z82_A Glycerol-3-phosphate de 27.4 43 0.0015 30.6 3.6 31 15-50 15-45 (335)
248 1o4v_A Phosphoribosylaminoimid 27.4 2.6E+02 0.0088 23.0 8.6 105 287-420 52-158 (183)
249 1y1p_A ARII, aldehyde reductas 27.3 71 0.0024 28.8 5.1 33 14-50 11-43 (342)
250 1djl_A Transhydrogenase DIII; 27.3 61 0.0021 26.9 3.9 36 14-51 45-85 (207)
251 4hcj_A THIJ/PFPI domain protei 27.3 1.1E+02 0.0037 25.0 5.7 43 7-51 2-44 (177)
252 3h2s_A Putative NADH-flavin re 27.2 48 0.0017 27.8 3.7 33 15-51 1-33 (224)
253 3rp8_A Flavoprotein monooxygen 27.2 44 0.0015 31.4 3.7 40 7-51 16-55 (407)
254 1g3q_A MIND ATPase, cell divis 27.2 65 0.0022 27.3 4.6 36 16-51 4-40 (237)
255 2x5n_A SPRPN10, 26S proteasome 27.1 1E+02 0.0035 25.5 5.6 35 17-51 110-144 (192)
256 3ulk_A Ketol-acid reductoisome 27.0 35 0.0012 32.7 2.8 53 13-70 36-94 (491)
257 2dpo_A L-gulonate 3-dehydrogen 27.0 42 0.0014 30.6 3.4 32 14-50 6-37 (319)
258 1gsa_A Glutathione synthetase; 26.7 52 0.0018 29.4 4.1 37 15-51 2-41 (316)
259 3kbq_A Protein TA0487; structu 26.6 47 0.0016 27.2 3.3 83 275-380 5-97 (172)
260 3ghy_A Ketopantoate reductase 26.5 42 0.0014 30.7 3.4 33 14-51 3-35 (335)
261 2fb6_A Conserved hypothetical 26.5 63 0.0022 24.4 3.8 37 15-51 8-48 (117)
262 1bg6_A N-(1-D-carboxylethyl)-L 26.4 47 0.0016 30.5 3.7 32 14-50 4-35 (359)
263 3o26_A Salutaridine reductase; 26.3 70 0.0024 28.4 4.8 35 14-51 11-45 (311)
264 4fgs_A Probable dehydrogenase 26.2 84 0.0029 27.9 5.1 45 3-50 17-61 (273)
265 3pfb_A Cinnamoyl esterase; alp 26.0 85 0.0029 26.7 5.2 36 15-50 46-83 (270)
266 1imj_A CIB, CCG1-interacting f 25.8 1.2E+02 0.0042 24.4 6.0 37 14-50 31-69 (210)
267 3ga2_A Endonuclease V; alpha-b 25.6 54 0.0018 28.5 3.5 31 114-144 108-145 (246)
268 4da9_A Short-chain dehydrogena 25.5 91 0.0031 27.5 5.4 40 8-50 22-61 (280)
269 4h3k_B RNA polymerase II subun 25.5 3E+02 0.01 23.1 9.7 46 5-54 17-62 (214)
270 2x4g_A Nucleoside-diphosphate- 25.4 73 0.0025 28.8 4.9 35 13-51 12-46 (342)
271 4b79_A PA4098, probable short- 25.4 2.2E+02 0.0075 24.6 7.6 34 15-51 11-44 (242)
272 1xjc_A MOBB protein homolog; s 25.3 1.1E+02 0.0039 24.7 5.4 36 16-51 6-41 (169)
273 3qsg_A NAD-binding phosphogluc 25.3 39 0.0013 30.6 2.8 33 13-50 23-56 (312)
274 1ydg_A Trp repressor binding p 25.2 92 0.0031 25.9 5.1 37 14-50 6-43 (211)
275 2pk3_A GDP-6-deoxy-D-LYXO-4-he 25.2 58 0.002 29.1 4.1 35 14-51 11-45 (321)
276 3p9y_A CG14216, LD40846P; phos 25.2 1.3E+02 0.0044 25.0 5.5 45 6-53 1-45 (198)
277 2qh8_A Uncharacterized protein 25.1 3.3E+02 0.011 23.8 9.2 30 114-143 68-97 (302)
278 4f0j_A Probable hydrolytic enz 25.1 69 0.0024 27.9 4.5 37 15-51 46-82 (315)
279 2r79_A Periplasmic binding pro 25.0 68 0.0023 28.3 4.4 37 100-143 51-89 (283)
280 3zq6_A Putative arsenical pump 24.9 71 0.0024 29.0 4.6 37 16-52 15-52 (324)
281 1cp2_A CP2, nitrogenase iron p 24.8 69 0.0024 27.9 4.4 36 16-51 3-38 (269)
282 3io3_A DEHA2D07832P; chaperone 24.8 79 0.0027 29.2 4.9 40 12-51 15-57 (348)
283 3lk7_A UDP-N-acetylmuramoylala 24.8 75 0.0026 30.5 4.9 33 13-50 8-40 (451)
284 2bru_C NAD(P) transhydrogenase 24.7 57 0.0019 26.5 3.2 36 14-51 30-70 (186)
285 3kht_A Response regulator; PSI 24.7 1.9E+02 0.0065 21.6 6.6 48 371-420 80-128 (144)
286 3rd5_A Mypaa.01249.C; ssgcid, 24.6 1.4E+02 0.0049 26.2 6.6 43 5-51 7-49 (291)
287 3dqp_A Oxidoreductase YLBE; al 24.6 49 0.0017 27.7 3.3 48 15-68 1-48 (219)
288 3of5_A Dethiobiotin synthetase 24.5 81 0.0028 27.0 4.6 34 16-49 6-40 (228)
289 3ged_A Short-chain dehydrogena 24.5 75 0.0026 27.7 4.4 33 16-51 3-35 (247)
290 2iz6_A Molybdenum cofactor car 24.5 79 0.0027 25.9 4.3 44 6-50 6-53 (176)
291 2rjn_A Response regulator rece 24.4 26 0.0009 27.3 1.3 59 371-434 78-137 (154)
292 3ea0_A ATPase, para family; al 24.4 64 0.0022 27.5 4.0 38 16-53 6-45 (245)
293 3f6r_A Flavodoxin; FMN binding 24.4 75 0.0026 24.7 4.1 36 16-51 3-39 (148)
294 3s40_A Diacylglycerol kinase; 24.4 1.1E+02 0.0036 27.6 5.6 44 8-51 2-48 (304)
295 4g65_A TRK system potassium up 24.3 21 0.00073 34.6 0.9 33 14-51 3-35 (461)
296 4ao6_A Esterase; hydrolase, th 24.3 69 0.0024 27.7 4.3 37 14-50 55-93 (259)
297 1n2z_A Vitamin B12 transport p 24.3 69 0.0023 27.5 4.2 38 100-144 49-88 (245)
298 2wtm_A EST1E; hydrolase; 1.60A 24.3 93 0.0032 26.3 5.1 35 16-50 28-64 (251)
299 1q1v_A DEK protein; winged-hel 24.2 77 0.0026 21.5 3.4 52 404-458 11-65 (70)
300 3la6_A Tyrosine-protein kinase 24.2 89 0.003 27.8 5.0 40 13-52 91-131 (286)
301 3cky_A 2-hydroxymethyl glutara 24.2 81 0.0028 28.0 4.8 33 13-50 3-35 (301)
302 4gi5_A Quinone reductase; prot 24.1 1.2E+02 0.0039 27.1 5.6 37 14-50 22-61 (280)
303 3fni_A Putative diflavin flavo 24.0 1.5E+02 0.0052 23.5 5.9 37 14-50 4-41 (159)
304 1xrs_B D-lysine 5,6-aminomutas 23.9 35 0.0012 30.1 2.1 39 13-51 119-166 (262)
305 3dhn_A NAD-dependent epimerase 23.8 1.1E+02 0.0038 25.5 5.4 33 15-51 5-37 (227)
306 3dkr_A Esterase D; alpha beta 23.8 67 0.0023 26.7 4.1 36 15-50 22-57 (251)
307 3se7_A VANA; alpha-beta struct 23.6 47 0.0016 30.5 3.1 39 13-51 2-44 (346)
308 2ehd_A Oxidoreductase, oxidore 23.6 78 0.0027 26.8 4.4 32 16-50 6-37 (234)
309 3gk5_A Uncharacterized rhodane 23.5 1.2E+02 0.004 22.1 4.8 33 14-50 55-87 (108)
310 1ehi_A LMDDL2, D-alanine:D-lac 23.5 70 0.0024 29.8 4.3 37 14-50 3-44 (377)
311 3dii_A Short-chain dehydrogena 23.5 84 0.0029 27.0 4.6 33 16-51 3-35 (247)
312 2vns_A Metalloreductase steap3 23.4 57 0.002 27.5 3.4 32 14-50 28-59 (215)
313 3to5_A CHEY homolog; alpha(5)b 23.3 69 0.0024 24.7 3.6 47 371-419 86-132 (134)
314 3h7a_A Short chain dehydrogena 23.3 98 0.0033 26.7 5.0 33 15-50 7-39 (252)
315 3guy_A Short-chain dehydrogena 23.3 66 0.0022 27.3 3.8 34 15-51 1-34 (230)
316 3pe6_A Monoglyceride lipase; a 23.3 77 0.0026 27.2 4.4 37 14-50 41-77 (303)
317 3orf_A Dihydropteridine reduct 23.2 85 0.0029 27.0 4.6 34 15-51 22-55 (251)
318 4g6h_A Rotenone-insensitive NA 23.2 44 0.0015 32.7 3.0 33 14-51 42-74 (502)
319 3nva_A CTP synthase; rossman f 23.1 84 0.0029 30.8 4.8 37 15-51 3-42 (535)
320 3p19_A BFPVVD8, putative blue 23.1 85 0.0029 27.4 4.6 40 9-51 10-49 (266)
321 3qha_A Putative oxidoreductase 23.1 49 0.0017 29.6 3.0 32 14-50 15-46 (296)
322 2zki_A 199AA long hypothetical 23.0 81 0.0028 25.9 4.3 36 14-50 4-40 (199)
323 2afh_E Nitrogenase iron protei 22.9 83 0.0028 27.8 4.6 36 16-51 4-39 (289)
324 4fbl_A LIPS lipolytic enzyme; 22.8 51 0.0017 28.9 3.1 31 18-48 54-84 (281)
325 3c85_A Putative glutathione-re 22.7 54 0.0018 26.7 3.0 33 14-51 39-72 (183)
326 1qo0_D AMIR; binding protein, 22.6 2.7E+02 0.0092 22.3 7.6 54 365-420 69-125 (196)
327 3ahc_A Phosphoketolase, xylulo 22.6 4.6E+02 0.016 27.4 10.4 81 356-445 727-812 (845)
328 3h99_A Methionyl-tRNA syntheta 22.6 69 0.0024 31.8 4.3 46 5-50 9-63 (560)
329 3ego_A Probable 2-dehydropanto 22.6 52 0.0018 29.7 3.1 31 15-51 3-33 (307)
330 4fs3_A Enoyl-[acyl-carrier-pro 22.5 85 0.0029 27.3 4.5 34 15-50 6-40 (256)
331 2hy5_B Intracellular sulfur ox 22.5 1.2E+02 0.004 23.6 4.8 37 16-52 7-46 (136)
332 1fjh_A 3alpha-hydroxysteroid d 22.5 1E+02 0.0035 26.4 5.1 32 16-50 2-33 (257)
333 3m1a_A Putative dehydrogenase; 22.4 85 0.0029 27.5 4.5 34 15-51 5-38 (281)
334 3dtt_A NADP oxidoreductase; st 22.4 72 0.0025 27.6 3.9 34 13-51 18-51 (245)
335 3afn_B Carbonyl reductase; alp 22.4 83 0.0028 27.0 4.4 32 16-50 8-39 (258)
336 1jay_A Coenzyme F420H2:NADP+ o 22.2 67 0.0023 26.8 3.6 31 15-50 1-32 (212)
337 3bfv_A CAPA1, CAPB2, membrane 22.2 1.2E+02 0.004 26.7 5.4 38 14-51 81-120 (271)
338 3sty_A Methylketone synthase 1 22.2 80 0.0027 26.7 4.3 37 13-50 11-47 (267)
339 3k96_A Glycerol-3-phosphate de 22.1 61 0.0021 30.0 3.5 39 7-51 23-61 (356)
340 3l18_A Intracellular protease 22.0 2E+02 0.0068 22.7 6.4 38 13-51 1-38 (168)
341 1r8j_A KAIA; circadian clock p 22.0 3.1E+02 0.011 24.1 7.5 63 383-457 157-227 (289)
342 2qjw_A Uncharacterized protein 21.9 96 0.0033 24.3 4.4 33 16-49 6-40 (176)
343 1e4e_A Vancomycin/teicoplanin 21.9 55 0.0019 30.0 3.2 37 14-50 3-43 (343)
344 3pnx_A Putative sulfurtransfer 21.9 1.1E+02 0.0039 24.5 4.7 35 17-51 8-42 (160)
345 3lqk_A Dipicolinate synthase s 21.8 3.5E+02 0.012 22.5 9.4 140 273-420 7-186 (201)
346 2o6l_A UDP-glucuronosyltransfe 21.7 2.4E+02 0.0083 22.0 6.9 37 15-51 21-60 (170)
347 3pef_A 6-phosphogluconate dehy 21.7 68 0.0023 28.4 3.7 31 15-50 2-32 (287)
348 2gas_A Isoflavone reductase; N 21.7 78 0.0027 28.1 4.2 33 15-51 3-35 (307)
349 4iin_A 3-ketoacyl-acyl carrier 21.6 1.2E+02 0.0042 26.3 5.4 33 15-50 29-61 (271)
350 3un1_A Probable oxidoreductase 21.5 93 0.0032 27.0 4.5 34 15-51 28-61 (260)
351 3l6d_A Putative oxidoreductase 21.3 51 0.0017 29.7 2.8 33 13-50 8-40 (306)
352 2qyt_A 2-dehydropantoate 2-red 21.3 34 0.0012 30.8 1.6 33 13-50 7-45 (317)
353 1gee_A Glucose 1-dehydrogenase 21.3 92 0.0031 26.8 4.5 32 16-50 8-39 (261)
354 3dm5_A SRP54, signal recogniti 21.2 1.2E+02 0.0042 29.0 5.5 39 14-52 100-138 (443)
355 3m6m_D Sensory/regulatory prot 21.2 1.1E+02 0.0037 23.3 4.5 32 114-145 57-99 (143)
356 4h15_A Short chain alcohol deh 21.2 1.2E+02 0.0039 26.7 5.0 34 14-50 10-43 (261)
357 3tl4_X Glutaminyl-tRNA synthet 21.1 82 0.0028 26.1 3.7 47 386-438 103-153 (187)
358 3ius_A Uncharacterized conserv 21.1 51 0.0018 28.9 2.8 32 15-51 6-37 (286)
359 3f8d_A Thioredoxin reductase ( 21.0 57 0.002 29.0 3.1 33 14-51 15-47 (323)
360 2pd6_A Estradiol 17-beta-dehyd 21.0 1.3E+02 0.0043 25.9 5.3 32 16-50 8-39 (264)
361 3c1o_A Eugenol synthase; pheny 21.0 75 0.0026 28.4 3.9 33 15-51 5-37 (321)
362 1txg_A Glycerol-3-phosphate de 20.9 55 0.0019 29.7 3.0 31 15-50 1-31 (335)
363 4dgk_A Phytoene dehydrogenase; 20.9 44 0.0015 32.4 2.4 30 16-50 3-32 (501)
364 3ak4_A NADH-dependent quinucli 20.7 1E+02 0.0036 26.6 4.7 32 16-50 13-44 (263)
365 3slg_A PBGP3 protein; structur 20.7 91 0.0031 28.6 4.5 52 13-68 23-76 (372)
366 1nff_A Putative oxidoreductase 20.6 1.4E+02 0.0049 25.7 5.6 32 16-50 8-39 (260)
367 3ppi_A 3-hydroxyacyl-COA dehyd 20.6 1.2E+02 0.0041 26.5 5.1 34 14-50 29-62 (281)
368 4e21_A 6-phosphogluconate dehy 20.5 74 0.0025 29.5 3.7 32 14-50 22-53 (358)
369 2ph1_A Nucleotide-binding prot 20.4 1.3E+02 0.0043 26.2 5.2 36 16-51 20-56 (262)
370 2x7x_A Sensor protein; transfe 20.4 4.4E+02 0.015 23.2 10.7 30 114-143 61-94 (325)
371 2fx5_A Lipase; alpha-beta hydr 20.4 69 0.0023 27.5 3.4 37 14-50 48-84 (258)
372 1ny5_A Transcriptional regulat 20.4 1.6E+02 0.0054 27.5 6.1 84 371-459 71-154 (387)
373 1zmt_A Haloalcohol dehalogenas 20.3 89 0.003 26.9 4.1 33 15-50 1-33 (254)
374 3cio_A ETK, tyrosine-protein k 20.3 1.2E+02 0.0042 27.1 5.1 38 15-52 105-143 (299)
375 3ttc_A HYPF, transcriptional r 20.3 1.1E+02 0.0037 31.1 5.1 39 114-152 355-394 (657)
376 2a5l_A Trp repressor binding p 20.2 1.3E+02 0.0044 24.6 5.0 37 14-50 5-42 (200)
377 3hly_A Flavodoxin-like domain; 20.2 1.4E+02 0.0046 23.7 4.9 36 15-50 1-37 (161)
378 4ezb_A Uncharacterized conserv 20.2 74 0.0025 28.8 3.6 31 15-50 25-56 (317)
379 1hyq_A MIND, cell division inh 20.1 87 0.003 27.1 4.0 36 16-51 4-40 (263)
380 3imf_A Short chain dehydrogena 20.0 1.2E+02 0.0042 26.1 5.0 33 15-50 6-38 (257)
381 2xdo_A TETX2 protein; tetracyc 20.0 78 0.0027 29.5 3.9 40 7-51 19-58 (398)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=5.3e-68 Score=523.54 Aligned_cols=441 Identities=25% Similarity=0.422 Sum_probs=356.1
Q ss_pred ccccccCCCCeEEEEcCCCccCHHHHHHHHHHHHhCC--CeEEEEeCCCCCCCC-----CCCCCceEEEcCCCCCCCcCC
Q 012543 6 ESHMQQKKGRRLILFPLPFQGHINPMLQLANILYSKG--FSITIIHTKFNSPNP-----SNYPHFTFCSIQDGLSETEAS 78 (461)
Q Consensus 6 ~~~m~~~~~~~il~~~~~~~GHi~p~l~La~~L~~rG--h~V~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 78 (461)
++.|...++.||+++|+|++||++|++.||+.|+++| +.|||++++.+.... ...++++|..+|++++++...
T Consensus 5 ~~~M~~~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ipdglp~~~~~ 84 (454)
T 3hbf_A 5 KNEMNGNNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVHDGLPKGYVS 84 (454)
T ss_dssp -------CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECCCCCCTTCCC
T ss_pred cccccCCCCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecCCCCCCCccc
Confidence 3457777789999999999999999999999999999 999999997332111 113579999999999887654
Q ss_pred cccHHHHHHHHHHHcchhHHHHHHHHhhcccccCCCCccEEEeCCCchhhHHHHHHcCCCeEEEecccHHHHHHHhhhhh
Q 012543 79 TTDFVALISVLHVKCAAPFQDCLAKLLSNAEEKEEEPIACLITDASWFFTHDVAESLKLPRIVLRSLSVSSSLVYAALPV 158 (461)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pDlvi~D~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 158 (461)
..+....+..+.+.+...+++.++++.+... .++|+||+|.++.|+..+|+++|||++.++++++.....+.+.+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~ 160 (454)
T 3hbf_A 85 SGNPREPIFLFIKAMQENFKHVIDEAVAETG----KNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDL 160 (454)
T ss_dssp CSCTTHHHHHHHHHHHHHHHHHHHHHHHHHC----CCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHH
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHhhcC----CCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHH
Confidence 4444444555555556667777777654333 579999999999999999999999999999999998887776554
Q ss_pred hhhcCCCCCCCCCCCcccCCCCCCCCCCCCCcccc-chhhhHHHHHHHHHHhccCccEEEEcChhHhhHHHHHHHHhhCC
Q 012543 159 LSQKGYFPIQDSHDLEAPVPELPPLRMKDIPVIET-LYQETLHQFAAEAINQMKASSGCIWNSVQELEQDSLAKFHREFP 237 (461)
Q Consensus 159 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~ 237 (461)
..................+++++.++.++++.... .....+.+.+.+..+....++.+++||++++|++.++++++.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~- 239 (454)
T 3hbf_A 161 IREKTGSKEVHDVKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKF- 239 (454)
T ss_dssp HHHTCCHHHHTTSSCBCCSTTSCCBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTS-
T ss_pred HHhhcCCCccccccccccCCCCCCcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcC-
Confidence 43321100000011223467777888888875443 2334466777777888888999999999999999988888765
Q ss_pred CCccccCcCccCCCCCcCCCccCcchhhhhcCCCCCCeEEEEEccccccCCHHHHHHHHHHHHhCCCceEEEECCCccCC
Q 012543 238 IPSFPIGPFHKYYPASASSLLSQDRICISRLDKQAPKSVIYVSFGSIAAIDETKFLEVAWGLANSKVPFLWVVRPGLVRG 317 (461)
Q Consensus 238 ~~~~~vG~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~ 317 (461)
+++++|||+...... ...+.++++.+||+.++++++|||||||....+.+++.+++.+++..+++|||+++.+.
T Consensus 240 ~~v~~vGPl~~~~~~---~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~~--- 313 (454)
T 3hbf_A 240 KLLLNVGPFNLTTPQ---RKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDP--- 313 (454)
T ss_dssp SCEEECCCHHHHSCC---SCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSCH---
T ss_pred CCEEEECCccccccc---ccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcc---
Confidence 579999999865432 12333456999999888899999999999988889999999999999999999998753
Q ss_pred chhcccCchhHHHHhcCCCceeeecChhhhhcCCCCCccccccCchHHHHHhhcCCccccCcccchhhhhHHHHHHhhhc
Q 012543 318 AEWIELLPRGFLEMLDGRGHIVKWAPQQEVLAHPATGAFWTHCGWNSTLESMCEGVPMICQPCHGEQMVIARYVSDVWKV 397 (461)
Q Consensus 318 ~~~~~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~ 397 (461)
...+|+++.++.++|+++++|+||.++|+|+++++||||||+||++|++++|||+|++|+++||+.||+++++.||+
T Consensus 314 ---~~~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~ 390 (454)
T 3hbf_A 314 ---KEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEI 390 (454)
T ss_dssp ---HHHSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCS
T ss_pred ---hhcCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCe
Confidence 34589999888999999999999999999999888999999999999999999999999999999999999985599
Q ss_pred eeecCC-ccCHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHc
Q 012543 398 GLHLER-KLERGEVERAIRRVMVDAEGREMRNRAAILKEKLDLCTKQGSSSYQSLENLISYILS 460 (461)
Q Consensus 398 G~~l~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~l~~ 460 (461)
|+.+.. .++.++|.++|+++|+|+++++||+||++|++++++++.++||+++.+++|++.|.+
T Consensus 391 Gv~l~~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~~ 454 (454)
T 3hbf_A 391 GVGVDNGVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVTS 454 (454)
T ss_dssp EEECGGGSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHTC
T ss_pred eEEecCCCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHhC
Confidence 999987 899999999999999984456899999999999999999999999999999999863
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=1.3e-62 Score=495.06 Aligned_cols=440 Identities=33% Similarity=0.652 Sum_probs=336.7
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCC---------CCCceEEEcCCCCCCCc---CCccc
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSPNPSN---------YPHFTFCSIQDGLSETE---ASTTD 81 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~---~~~~~ 81 (461)
++||+++|+|++||++|++.||++|++|||+|||++++.+...... .++++|+++++++++.. ....+
T Consensus 8 ~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~~~ 87 (482)
T 2pq6_A 8 KPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVSQD 87 (482)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------CC
T ss_pred CCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcchh
Confidence 5799999999999999999999999999999999998743211111 14899999998776521 11233
Q ss_pred HHHHHHHHHHHcchhHHHHHHHHhhcc-cccCCCCccEEEeCCCchhhHHHHHHcCCCeEEEecccHHHHHHHhhhhhhh
Q 012543 82 FVALISVLHVKCAAPFQDCLAKLLSNA-EEKEEEPIACLITDASWFFTHDVAESLKLPRIVLRSLSVSSSLVYAALPVLS 160 (461)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~pDlvi~D~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 160 (461)
...++..+...+...++++++.+.... + .++|+||+|.++.|+..+|+++|||+|.++++++.....+..++.+.
T Consensus 88 ~~~~~~~~~~~~~~~l~~ll~~l~~~~~~----~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 163 (482)
T 2pq6_A 88 VPTLCQSVRKNFLKPYCELLTRLNHSTNV----PPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFV 163 (482)
T ss_dssp HHHHHHHHTTSSHHHHHHHHHHHHTCSSS----CCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHhhhccC----CCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHH
Confidence 444444444556666666666664310 1 57999999999999999999999999999999887776665556555
Q ss_pred hcCCCCCCCC--------CCCcccCCCCCCCCCCCCCccccc--hhhhHHHHHHHHHHhccCccEEEEcChhHhhHHHHH
Q 012543 161 QKGYFPIQDS--------HDLEAPVPELPPLRMKDIPVIETL--YQETLHQFAAEAINQMKASSGCIWNSVQELEQDSLA 230 (461)
Q Consensus 161 ~~~~~p~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~ 230 (461)
..++.|.... .+..+.+++++.++..+++..... ....+.+.+....+....++.+++|+++++|++.++
T Consensus 164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~~ 243 (482)
T 2pq6_A 164 ERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVIN 243 (482)
T ss_dssp HTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHH
T ss_pred hcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHHHH
Confidence 6666665421 112223344444444454432211 123344555556677788899999999999999888
Q ss_pred HHHhhCCCCccccCcCccC-CCC-------C-cCCCccCcchhhhhcCCCCCCeEEEEEccccccCCHHHHHHHHHHHHh
Q 012543 231 KFHREFPIPSFPIGPFHKY-YPA-------S-ASSLLSQDRICISRLDKQAPKSVIYVSFGSIAAIDETKFLEVAWGLAN 301 (461)
Q Consensus 231 ~~~~~~~~~~~~vG~~~~~-~~~-------~-~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~ 301 (461)
++++.+ +++++|||+... +.. . ....++.+.++.+||+.++++++|||||||....+.+.+..++.+++.
T Consensus 244 ~~~~~~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~ 322 (482)
T 2pq6_A 244 ALSSTI-PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLAN 322 (482)
T ss_dssp HHHTTC-TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHhC-CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHHh
Confidence 888876 679999999863 111 0 001224455689999987788999999999988788889999999999
Q ss_pred CCCceEEEECCCccCCchhcccCchhHHHHhcCCCceeeecChhhhhcCCCCCccccccCchHHHHHhhcCCccccCccc
Q 012543 302 SKVPFLWVVRPGLVRGAEWIELLPRGFLEMLDGRGHIVKWAPQQEVLAHPATGAFWTHCGWNSTLESMCEGVPMICQPCH 381 (461)
Q Consensus 302 ~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~ 381 (461)
.++++||+++.+...+. ...+|+++.++.++|+++++|+||.++|.|+++++||||||+||++||+++|||+|++|++
T Consensus 323 ~~~~~l~~~~~~~~~~~--~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~ 400 (482)
T 2pq6_A 323 CKKSFLWIIRPDLVIGG--SVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFF 400 (482)
T ss_dssp TTCEEEEECCGGGSTTT--GGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS
T ss_pred cCCcEEEEEcCCccccc--cccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCcc
Confidence 99999999875421110 1237888888888999999999999999999999999999999999999999999999999
Q ss_pred chhhhhHHHHH-HhhhceeecCCccCHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHc
Q 012543 382 GEQMVIARYVS-DVWKVGLHLERKLERGEVERAIRRVMVDAEGREMRNRAAILKEKLDLCTKQGSSSYQSLENLISYILS 460 (461)
Q Consensus 382 ~DQ~~na~~v~-~~lG~G~~l~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~l~~ 460 (461)
.||+.||++++ + +|+|+.+...+++++|.++|+++|+|+++.+||+||+++++.+++++.++||+.+++++|++.+++
T Consensus 401 ~dQ~~na~~~~~~-~G~g~~l~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~~ 479 (482)
T 2pq6_A 401 ADQPTDCRFICNE-WEIGMEIDTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVLL 479 (482)
T ss_dssp TTHHHHHHHHHHT-SCCEEECCSSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTTC
T ss_pred cchHHHHHHHHHH-hCEEEEECCCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHh
Confidence 99999999996 6 699999976789999999999999994344799999999999999999999999999999999875
Q ss_pred C
Q 012543 461 Y 461 (461)
Q Consensus 461 ~ 461 (461)
+
T Consensus 480 ~ 480 (482)
T 2pq6_A 480 K 480 (482)
T ss_dssp C
T ss_pred c
Confidence 4
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=9.2e-60 Score=472.63 Aligned_cols=442 Identities=26% Similarity=0.413 Sum_probs=321.8
Q ss_pred cccCCCCeEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCCCC-CCC-C----C-CCCceEEEcCCCCCCCcCCcc
Q 012543 9 MQQKKGRRLILFPLPFQGHINPMLQLANILYSK-GFSITIIHTKFNS-PNP-S----N-YPHFTFCSIQDGLSETEASTT 80 (461)
Q Consensus 9 m~~~~~~~il~~~~~~~GHi~p~l~La~~L~~r-Gh~V~~~~~~~~~-~~~-~----~-~~~~~~~~~~~~~~~~~~~~~ 80 (461)
|..++++||+++|+|++||++|+++||++|++| ||+|||++++.+. ... . . ..+++|++++++.........
T Consensus 1 M~~~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~ 80 (480)
T 2vch_A 1 MEESKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVDLTDLSSST 80 (480)
T ss_dssp -----CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCCCTTSCTTC
T ss_pred CCCCCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCCCCCCCCCch
Confidence 556677899999999999999999999999998 9999999997531 111 1 0 258999999864221111112
Q ss_pred cHHHHHHHHHHHcchhHHHHHHHHhhcccccCCCCc-cEEEeCCCchhhHHHHHHcCCCeEEEecccHHHHHHHhhhhhh
Q 012543 81 DFVALISVLHVKCAAPFQDCLAKLLSNAEEKEEEPI-ACLITDASWFFTHDVAESLKLPRIVLRSLSVSSSLVYAALPVL 159 (461)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p-Dlvi~D~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 159 (461)
+....+......+...+++.++++.. . .++ |+||+|.++.|+..+|+++|||+|.++++++.....+.+++..
T Consensus 81 ~~~~~~~~~~~~~~~~l~~ll~~~~~--~----~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 154 (480)
T 2vch_A 81 RIESRISLTVTRSNPELRKVFDSFVE--G----GRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKL 154 (480)
T ss_dssp CHHHHHHHHHHTTHHHHHHHHHHHHH--T----TCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhhhHHHHHHHHHhcc--C----CCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHH
Confidence 33332333334445556666665532 1 568 9999999988999999999999999999988766655544432
Q ss_pred hhcCCCCCCCCCCCcccCCCCCCCCCCCCCccccchhhhHHHHHHHHHHhccCccEEEEcChhHhhHHHHHHHHhhC--C
Q 012543 160 SQKGYFPIQDSHDLEAPVPELPPLRMKDIPVIETLYQETLHQFAAEAINQMKASSGCIWNSVQELEQDSLAKFHREF--P 237 (461)
Q Consensus 160 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~--~ 237 (461)
......+.... .....+++++.+...+++.....+.....+.+......+.....+++|++.+++.+....+.... .
T Consensus 155 ~~~~~~~~~~~-~~~~~~Pg~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~ 233 (480)
T 2vch_A 155 DETVSCEFREL-TEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDK 233 (480)
T ss_dssp HHHCCSCGGGC-SSCBCCTTCCCBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTC
T ss_pred HhcCCCccccc-CCcccCCCCCCCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCC
Confidence 22111111100 00112344444444444432212112234444444555667788899999999988776665411 2
Q ss_pred CCccccCcCccCCCCCcCCCccCcchhhhhcCCCCCCeEEEEEccccccCCHHHHHHHHHHHHhCCCceEEEECCCccCC
Q 012543 238 IPSFPIGPFHKYYPASASSLLSQDRICISRLDKQAPKSVIYVSFGSIAAIDETKFLEVAWGLANSKVPFLWVVRPGLVRG 317 (461)
Q Consensus 238 ~~~~~vG~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~ 317 (461)
+++++|||+...... ....+.++++.+||+..+++++|||||||....+.+++..++.+++..+++|||+++.....+
T Consensus 234 ~~v~~vGpl~~~~~~--~~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~ 311 (480)
T 2vch_A 234 PPVYPVGPLVNIGKQ--EAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIA 311 (480)
T ss_dssp CCEEECCCCCCCSCS--CC-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSST
T ss_pred CcEEEEecccccccc--ccCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCccccc
Confidence 469999999865321 000123456899999877889999999999888889999999999999999999998653110
Q ss_pred ----------chhcccCchhHHHHhcCCCceee-ecChhhhhcCCCCCccccccCchHHHHHhhcCCccccCcccchhhh
Q 012543 318 ----------AEWIELLPRGFLEMLDGRGHIVK-WAPQQEVLAHPATGAFWTHCGWNSTLESMCEGVPMICQPCHGEQMV 386 (461)
Q Consensus 318 ----------~~~~~~lp~~~~~~~~~~~~~~~-~vp~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~ 386 (461)
.+....+|+++.++.+++++++. |+||.+||+|+++++||||||+||++||+++|||||++|+++||+.
T Consensus 312 ~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ~~ 391 (480)
T 2vch_A 312 NSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKM 391 (480)
T ss_dssp TTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHH
T ss_pred cccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccchH
Confidence 11013589999988888888776 9999999999998889999999999999999999999999999999
Q ss_pred hHHHH-HHhhhceeecCC----ccCHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHc
Q 012543 387 IARYV-SDVWKVGLHLER----KLERGEVERAIRRVMVDAEGREMRNRAAILKEKLDLCTKQGSSSYQSLENLISYILS 460 (461)
Q Consensus 387 na~~v-~~~lG~G~~l~~----~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~l~~ 460 (461)
||+++ ++ +|+|+.+.. .+++++|.++|+++|+++++++||+||++|++++++++.++|++.+++++|++.+++
T Consensus 392 na~~l~~~-~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~~~ 469 (480)
T 2vch_A 392 NAVLLSED-IRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKA 469 (480)
T ss_dssp HHHHHHHT-TCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-hCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 99997 67 799999975 489999999999999843348999999999999999999999999999999998864
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=1.3e-60 Score=475.75 Aligned_cols=434 Identities=25% Similarity=0.464 Sum_probs=325.6
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCe--EEEEeCCCCCC----CCCC--CCCceEEEcCCCCCCCcCCcccHHH
Q 012543 13 KGRRLILFPLPFQGHINPMLQLANILYSKGFS--ITIIHTKFNSP----NPSN--YPHFTFCSIQDGLSETEASTTDFVA 84 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~--V~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
+++||+++|+|++||++|+++||+.|++|||+ |||++++.+.. .... ..+++++++++++++..........
T Consensus 6 ~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~~glp~~~~~~~~~~~ 85 (456)
T 2c1x_A 6 TNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISDGVPEGYVFAGRPQE 85 (456)
T ss_dssp -CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECCCCCCTTCCCCCCTTH
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCCCCCCCcccccCChHH
Confidence 46799999999999999999999999999765 57787752211 0010 2589999999887765422222333
Q ss_pred HHHHHHHHcchhHHHHHHHHhhcccccCCCCccEEEeCCCchhhHHHHHHcCCCeEEEecccHHHHHHHhhhhhhhhc-C
Q 012543 85 LISVLHVKCAAPFQDCLAKLLSNAEEKEEEPIACLITDASWFFTHDVAESLKLPRIVLRSLSVSSSLVYAALPVLSQK-G 163 (461)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pDlvi~D~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~-~ 163 (461)
....+...+...+++.++++.+... .++|+||+|.++.|+..+|+++|||+|.++++++.....+...+..... .
T Consensus 86 ~~~~~~~~~~~~~~~~l~~l~~~~~----~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 161 (456)
T 2c1x_A 86 DIELFTRAAPESFRQGMVMAVAETG----RPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIG 161 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT----CCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHC
T ss_pred HHHHHHHHhHHHHHHHHHHHHhccC----CCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccC
Confidence 3334444444455566665543222 6899999999989999999999999999999987766554333322111 1
Q ss_pred CCCC-CCCCCCcccCCCCCCCCCCCCCcccc--chhhhHHHHHHHHHHhccCccEEEEcChhHhhHHHHHHHHhhCCCCc
Q 012543 164 YFPI-QDSHDLEAPVPELPPLRMKDIPVIET--LYQETLHQFAAEAINQMKASSGCIWNSVQELEQDSLAKFHREFPIPS 240 (461)
Q Consensus 164 ~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~ 240 (461)
+.+. .........+++++.++..+++.... .....+.+...+.......++.+++|+++++|++.++.+++.+ +++
T Consensus 162 ~~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~-~~~ 240 (456)
T 2c1x_A 162 VSGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKL-KTY 240 (456)
T ss_dssp SSCCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHS-SCE
T ss_pred CcccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhcC-CCE
Confidence 1111 00011112345555555555543211 1112334455555556677889999999999998888877766 579
Q ss_pred cccCcCccCCCCCcCCCccCcchhhhhcCCCCCCeEEEEEccccccCCHHHHHHHHHHHHhCCCceEEEECCCccCCchh
Q 012543 241 FPIGPFHKYYPASASSLLSQDRICISRLDKQAPKSVIYVSFGSIAAIDETKFLEVAWGLANSKVPFLWVVRPGLVRGAEW 320 (461)
Q Consensus 241 ~~vG~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~ 320 (461)
++|||+...... ..++.+.++.+|++..+++++|||||||......+++..++.+++..++++||+++...
T Consensus 241 ~~vGpl~~~~~~---~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~------ 311 (456)
T 2c1x_A 241 LNIGPFNLITPP---PVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKA------ 311 (456)
T ss_dssp EECCCHHHHC------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGGG------
T ss_pred EEecCcccCccc---ccccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCcc------
Confidence 999999865432 11344455889999877899999999999987788899999999999999999997643
Q ss_pred cccCchhHHHHhcCCCceeeecChhhhhcCCCCCccccccCchHHHHHhhcCCccccCcccchhhhhHHHHHHhhhceee
Q 012543 321 IELLPRGFLEMLDGRGHIVKWAPQQEVLAHPATGAFWTHCGWNSTLESMCEGVPMICQPCHGEQMVIARYVSDVWKVGLH 400 (461)
Q Consensus 321 ~~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~ 400 (461)
...+|+++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||+|++|++.||+.||+++++.||+|+.
T Consensus 312 ~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~ 391 (456)
T 2c1x_A 312 RVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVR 391 (456)
T ss_dssp GGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEE
T ss_pred hhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEE
Confidence 34588888888889999999999999999998888999999999999999999999999999999999999994499999
Q ss_pred cCC-ccCHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHc
Q 012543 401 LER-KLERGEVERAIRRVMVDAEGREMRNRAAILKEKLDLCTKQGSSSYQSLENLISYILS 460 (461)
Q Consensus 401 l~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~l~~ 460 (461)
+.. .++.++|.++|+++|+|+++++||+||+++++.+++++.++||+.+.+++|++.+.+
T Consensus 392 l~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 392 IEGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSK 452 (456)
T ss_dssp CGGGSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTS
T ss_pred ecCCCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHh
Confidence 977 799999999999999984455899999999999999999999999999999998864
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=9.8e-57 Score=449.00 Aligned_cols=425 Identities=26% Similarity=0.398 Sum_probs=318.6
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCCCCC-C--------CCCCCceEEEcCCC-CCCCcCCcc
Q 012543 13 KGRRLILFPLPFQGHINPMLQLANILYSK--GFSITIIHTKFNSPN-P--------SNYPHFTFCSIQDG-LSETEASTT 80 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~p~l~La~~L~~r--Gh~V~~~~~~~~~~~-~--------~~~~~~~~~~~~~~-~~~~~~~~~ 80 (461)
+++||+++|+|++||++|+++||+.|++| ||+|||++++..... . ....+++|..+|++ +++... ..
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~~-~~ 86 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPPPQEL-LK 86 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCCCCCGGG-GG
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCCCCcccc-cC
Confidence 46799999999999999999999999999 999999999754311 0 11258999999975 333210 11
Q ss_pred cHHHHHHHHHHHcchhHHHHHHHHhhcccccCCCCccEEEeCCCchhhHHHHHHcCCCeEEEecccHHHHHHHhhhhhhh
Q 012543 81 DFVALISVLHVKCAAPFQDCLAKLLSNAEEKEEEPIACLITDASWFFTHDVAESLKLPRIVLRSLSVSSSLVYAALPVLS 160 (461)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pDlvi~D~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 160 (461)
.....+......+...+++.++++ + . .++|+||+|.++.|+..+|+++|||++.++++++.....+.+.+...
T Consensus 87 ~~~~~~~~~~~~~~~~~~~ll~~~-~--~----~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 159 (463)
T 2acv_A 87 SPEFYILTFLESLIPHVKATIKTI-L--S----NKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQ 159 (463)
T ss_dssp SHHHHHHHHHHHTHHHHHHHHHHH-C--C----TTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSC
T ss_pred CccHHHHHHHHhhhHHHHHHHHhc-c--C----CCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhc
Confidence 111112233344445555555554 1 1 67999999999899999999999999999999887766655444322
Q ss_pred hcCCCCCCCCCCC---cccCCCC-CCCCCCCCCccccchhhhHHHHHHHHHHhccCccEEEEcChhHhhHHHHHHHHhhC
Q 012543 161 QKGYFPIQDSHDL---EAPVPEL-PPLRMKDIPVIETLYQETLHQFAAEAINQMKASSGCIWNSVQELEQDSLAKFHREF 236 (461)
Q Consensus 161 ~~~~~p~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~ 236 (461)
.. .+... ... ...++++ +.+...+++.....+ ......+..........+.+++||++++|.+...++....
T Consensus 160 ~~--~~~~~-~~~~~~~~~~pg~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~ 235 (463)
T 2acv_A 160 IE--EVFDD-SDRDHQLLNIPGISNQVPSNVLPDACFNK-DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHD 235 (463)
T ss_dssp TT--CCCCC-SSGGGCEECCTTCSSCEEGGGSCHHHHCT-TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHC
T ss_pred cc--CCCCC-ccccCceeECCCCCCCCChHHCchhhcCC-chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhcc
Confidence 10 11111 011 2234555 444444444222111 2234444444555677888999999999998877776655
Q ss_pred --CCCccccCcCccCCC-CCcCCCccCcchhhhhcCCCCCCeEEEEEccccc-cCCHHHHHHHHHHHHhCCCceEEEECC
Q 012543 237 --PIPSFPIGPFHKYYP-ASASSLLSQDRICISRLDKQAPKSVIYVSFGSIA-AIDETKFLEVAWGLANSKVPFLWVVRP 312 (461)
Q Consensus 237 --~~~~~~vG~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~a~~~~~~~~i~~~~~ 312 (461)
.+++++|||+..... ......++.+.++.+||+..+++++|||||||.. ..+.+++..++.+++..+++|||+++.
T Consensus 236 ~p~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~ 315 (463)
T 2acv_A 236 EKIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSA 315 (463)
T ss_dssp TTSCCEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCC
T ss_pred ccCCcEEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECC
Confidence 467999999986532 1000001233568999998878899999999999 777888999999999999999999976
Q ss_pred CccCCchhcccCchhHHHHh--cCCCceeeecChhhhhcCCCCCccccccCchHHHHHhhcCCccccCcccchhhhhHHH
Q 012543 313 GLVRGAEWIELLPRGFLEML--DGRGHIVKWAPQQEVLAHPATGAFWTHCGWNSTLESMCEGVPMICQPCHGEQMVIARY 390 (461)
Q Consensus 313 ~~~~~~~~~~~lp~~~~~~~--~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~ 390 (461)
+ .+.+|+++.++. ++|+++++|+||.++|+|+++++||||||+||++|++++|||+|++|+++||+.||++
T Consensus 316 ~-------~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~ 388 (463)
T 2acv_A 316 E-------KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFR 388 (463)
T ss_dssp C-------GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHH
T ss_pred C-------cccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHH
Confidence 4 123777777776 7899999999999999998888899999999999999999999999999999999999
Q ss_pred H-HHhhhceeec-C----C--ccCHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHH
Q 012543 391 V-SDVWKVGLHL-E----R--KLERGEVERAIRRVMVDAEGREMRNRAAILKEKLDLCTKQGSSSYQSLENLISYIL 459 (461)
Q Consensus 391 v-~~~lG~G~~l-~----~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~l~ 459 (461)
+ ++ +|+|+.+ . . .++.++|.++|+++|+++ ++||+||+++++.+++++.++|++++++++|++.++
T Consensus 389 lv~~-~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~--~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 389 LVKE-WGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKD--SIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 462 (463)
T ss_dssp HHHT-SCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTT--CTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred HHHH-cCeEEEEecccCCCCccccHHHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhc
Confidence 5 78 6999999 3 2 479999999999999731 689999999999999999999999999999999874
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.5e-44 Score=359.08 Aligned_cols=395 Identities=15% Similarity=0.175 Sum_probs=266.9
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCcCC----cccHHHHHHHH
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSPNPSNYPHFTFCSIQDGLSETEAS----TTDFVALISVL 89 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 89 (461)
++||+|++++++||++|+++||++|+++||+|+|++++..... ....|+++++++.+++..... ..+....+..+
T Consensus 12 ~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (424)
T 2iya_A 12 PRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQ-VKAAGATPVVYDSILPKESNPEESWPEDQESAMGLF 90 (424)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHH-HHHHTCEEEECCCCSCCTTCTTCCCCSSHHHHHHHH
T ss_pred cceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHH-HHhCCCEEEecCccccccccchhhcchhHHHHHHHH
Confidence 5799999999999999999999999999999999998643222 122478999998765433211 22333333333
Q ss_pred HHHcchhHHHHHHHHhhcccccCCCCccEEEeCCCchhhHHHHHHcCCCeEEEecccHHHHHHHhhhhhhhhcCCCCCCC
Q 012543 90 HVKCAAPFQDCLAKLLSNAEEKEEEPIACLITDASWFFTHDVAESLKLPRIVLRSLSVSSSLVYAALPVLSQKGYFPIQD 169 (461)
Q Consensus 90 ~~~~~~~~~~~~~~l~~~~~~~~~~~pDlvi~D~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 169 (461)
...+.....+ +.++++. ++||+||+|.++.|+..+|+.+|||+|.+++.+..........+. ....+.....
T Consensus 91 ~~~~~~~~~~-l~~~l~~------~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 162 (424)
T 2iya_A 91 LDEAVRVLPQ-LEDAYAD------DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPA-VQDPTADRGE 162 (424)
T ss_dssp HHHHHHHHHH-HHHHTTT------SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGG-GSCCCC----
T ss_pred HHHHHHHHHH-HHHHHhc------cCCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccccccccccc-cccccccccc
Confidence 3333222222 3333332 789999999888889999999999999998764311000000000 0000000000
Q ss_pred CCCCcccCCCCCCCCCCCCCccccchhhhHHHHHHHHH----------HhccCccEEEEcChhHhhHHHHHHHHhhCCCC
Q 012543 170 SHDLEAPVPELPPLRMKDIPVIETLYQETLHQFAAEAI----------NQMKASSGCIWNSVQELEQDSLAKFHREFPIP 239 (461)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ 239 (461)
......+. ... ..+.... .....+.+.+.... ......+.++.++.+.++++ ...++.+
T Consensus 163 ---~~~~~~~~-~~~-~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~-----~~~~~~~ 231 (424)
T 2iya_A 163 ---EAAAPAGT-GDA-EEGAEAE-DGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIK-----GDTVGDN 231 (424)
T ss_dssp ----------------------H-HHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTT-----GGGCCTT
T ss_pred ---cccccccc-ccc-hhhhccc-hhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCC-----ccCCCCC
Confidence 00000000 000 0000000 00001111111111 11124567888999988764 2445667
Q ss_pred ccccCcCccCCCCCcCCCccCcchhhhhcCCCCCCeEEEEEccccccCCHHHHHHHHHHHHhCCCceEEEECCCccCCch
Q 012543 240 SFPIGPFHKYYPASASSLLSQDRICISRLDKQAPKSVIYVSFGSIAAIDETKFLEVAWGLANSKVPFLWVVRPGLVRGAE 319 (461)
Q Consensus 240 ~~~vG~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~ 319 (461)
+++|||+..... +..+|++..+++++|||++||......+.+..++++++..+.+++|+++.+... +
T Consensus 232 ~~~vGp~~~~~~-----------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~--~ 298 (424)
T 2iya_A 232 YTFVGPTYGDRS-----------HQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGRFVDP--A 298 (424)
T ss_dssp EEECCCCCCCCG-----------GGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCTTSCG--G
T ss_pred EEEeCCCCCCcc-----------cCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECCcCCh--H
Confidence 999999764211 123577655578999999999986567888899999998888888887654211 1
Q ss_pred hcccCchhHHHHhcCCCceeeecChhhhhcCCCCCccccccCchHHHHHhhcCCccccCcccchhhhhHHHHHHhhhcee
Q 012543 320 WIELLPRGFLEMLDGRGHIVKWAPQQEVLAHPATGAFWTHCGWNSTLESMCEGVPMICQPCHGEQMVIARYVSDVWKVGL 399 (461)
Q Consensus 320 ~~~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~ 399 (461)
.+..+| +|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||+.||+++++ +|+|+
T Consensus 299 ~~~~~~--------~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~ 367 (424)
T 2iya_A 299 DLGEVP--------PNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVE-LGLGR 367 (424)
T ss_dssp GGCSCC--------TTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-TTSEE
T ss_pred HhccCC--------CCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHH-CCCEE
Confidence 122233 45589999999999999998 99999999999999999999999999999999999999 69999
Q ss_pred ecCC-ccCHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHH
Q 012543 400 HLER-KLERGEVERAIRRVMVDAEGREMRNRAAILKEKLDLCTKQGSSSYQSLENLISYIL 459 (461)
Q Consensus 400 ~l~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~l~ 459 (461)
.+.. .+++++|.++|+++++| ++++++++++++.++ ..++..++++.+.+.++
T Consensus 368 ~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~ 421 (424)
T 2iya_A 368 HIPRDQVTAEKLREAVLAVASD---PGVAERLAAVRQEIR----EAGGARAAADILEGILA 421 (424)
T ss_dssp ECCGGGCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----TSCHHHHHHHHHHHHHH
T ss_pred EcCcCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH----hcCcHHHHHHHHHHHHh
Confidence 9987 78999999999999999 899999999999998 67888888888877765
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=9.8e-45 Score=357.61 Aligned_cols=358 Identities=17% Similarity=0.178 Sum_probs=232.5
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCc----------CC----
Q 012543 13 KGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSPNPSNYPHFTFCSIQDGLSETE----------AS---- 78 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~---- 78 (461)
+.|||+|+++|++||++|+++||++|++|||+|+|++++.... .. ..++.+.++.++..... ..
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~-~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRA-VA-EAGLCAVDVSPGVNYAKLFVPDDTDVTDPMHSE 98 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHH-HH-TTTCEEEESSTTCCSHHHHSCCC----------
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhh-HH-hcCCeeEecCCchhHhhhccccccccccccchh
Confidence 4699999999999999999999999999999999999863322 12 25788888764332111 00
Q ss_pred cccHHHHHHHHHHHcchhHHHHHHHHhhcccccCCCCccEEEeCCCchhhHHHHHHcCCCeEEEecccHHHHHHHhhhhh
Q 012543 79 TTDFVALISVLHVKCAAPFQDCLAKLLSNAEEKEEEPIACLITDASWFFTHDVAESLKLPRIVLRSLSVSSSLVYAALPV 158 (461)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pDlvi~D~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 158 (461)
..........+.......+.+.++.+.+ ++||+||+|.+++++..+|+.+|||++.+...+.........
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~--- 168 (400)
T 4amg_A 99 GLGEGFFAEMFARVSAVAVDGALRTARS-------WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLGA--- 168 (400)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHH-------HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHHH---
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCCEEEECcchHHHHHHHHHcCCCceeecccccccccchhh---
Confidence 0011111222222222333333333333 789999999999999999999999999875442211111000
Q ss_pred hhhcCCCCCCCCCCCcccCCCCCCCCCCCCCccccchhhhHHHHHHHHHHhc-cCccEEEEcChhHhhHHHHHHHHhhCC
Q 012543 159 LSQKGYFPIQDSHDLEAPVPELPPLRMKDIPVIETLYQETLHQFAAEAINQM-KASSGCIWNSVQELEQDSLAKFHREFP 237 (461)
Q Consensus 159 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~l~~~~~~~~~~~~~ 237 (461)
.....+........-.. ......+....+..... .+....
T Consensus 169 -----------------------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 209 (400)
T 4amg_A 169 -----------------------------------LIRRAMSKDYERHGVTGEPTGSVRLTTTPPSVEAL----LPEDRR 209 (400)
T ss_dssp -----------------------------------HHHHHTHHHHHHTTCCCCCSCEEEEECCCHHHHHT----SCGGGC
T ss_pred -----------------------------------HHHHHHHHHHHHhCCCcccccchhhcccCchhhcc----Cccccc
Confidence 00000011110000000 11122223333222211 011011
Q ss_pred CC-ccccCcCccCCCCCcCCCccCcchhhhhcCCCCCCeEEEEEccccccCC--HHHHHHHHHHHHhCCCceEEEECCCc
Q 012543 238 IP-SFPIGPFHKYYPASASSLLSQDRICISRLDKQAPKSVIYVSFGSIAAID--ETKFLEVAWGLANSKVPFLWVVRPGL 314 (461)
Q Consensus 238 ~~-~~~vG~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~--~~~~~~~~~a~~~~~~~~i~~~~~~~ 314 (461)
.+ ...+++.... ....+.+|++..+++++||||+||..... .+.+..++++++..+.+++|...+..
T Consensus 210 ~~~~~~~~~~~~~----------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~ 279 (400)
T 4amg_A 210 SPGAWPMRYVPYN----------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGD 279 (400)
T ss_dssp CTTCEECCCCCCC----------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTC
T ss_pred CCcccCccccccc----------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCcc
Confidence 11 1111211111 11225568888888999999999987633 35678889999999999999887654
Q ss_pred cCCchhcccCchhHHHHhcCCCceeeecChhhhhcCCCCCccccccCchHHHHHhhcCCccccCcccchhhhhHHHHHHh
Q 012543 315 VRGAEWIELLPRGFLEMLDGRGHIVKWAPQQEVLAHPATGAFWTHCGWNSTLESMCEGVPMICQPCHGEQMVIARYVSDV 394 (461)
Q Consensus 315 ~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~ 394 (461)
... ...+|+|+ ++.+|+||.++|+++++ ||||||+||++||+++|||+|++|+++||+.||+++++
T Consensus 280 ~~~---~~~~~~~v--------~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~- 345 (400)
T 4amg_A 280 LAL---LGELPANV--------RVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTG- 345 (400)
T ss_dssp CCC---CCCCCTTE--------EEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHH-
T ss_pred ccc---cccCCCCE--------EEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHH-
Confidence 221 34466655 89999999999999998 99999999999999999999999999999999999999
Q ss_pred hhceeecCC-ccCHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHH
Q 012543 395 WKVGLHLER-KLERGEVERAIRRVMVDAEGREMRNRAAILKEKLDLCTKQGSSSYQSLENLIS 456 (461)
Q Consensus 395 lG~G~~l~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~ 456 (461)
+|+|+.++. +.+++ +|+++|+| ++||++|++++++++ ...+..++++.|.+
T Consensus 346 ~G~g~~l~~~~~~~~----al~~lL~d---~~~r~~a~~l~~~~~----~~~~~~~~a~~le~ 397 (400)
T 4amg_A 346 LGIGFDAEAGSLGAE----QCRRLLDD---AGLREAALRVRQEMS----EMPPPAETAAXLVA 397 (400)
T ss_dssp HTSEEECCTTTCSHH----HHHHHHHC---HHHHHHHHHHHHHHH----TSCCHHHHHHHHHH
T ss_pred CCCEEEcCCCCchHH----HHHHHHcC---HHHHHHHHHHHHHHH----cCCCHHHHHHHHHH
Confidence 699999987 66665 67789999 899999999999998 55566666665544
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.2e-42 Score=344.20 Aligned_cols=376 Identities=12% Similarity=0.048 Sum_probs=251.4
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCcCC-cccHHHHHHHHHHHc
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSPNPSNYPHFTFCSIQDGLSETEAS-TTDFVALISVLHVKC 93 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 93 (461)
|||+|++.|+.||++|+++||++|+++||+|+|++++..... ....|+++++++....+.... ...... .+...+
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~-v~~~g~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~ 76 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAER-LAEVGVPHVPVGPSARAPIQRAKPLTAE---DVRRFT 76 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHH-HHHTTCCEEECCC-------CCSCCCHH---HHHHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHH-HHHcCCeeeeCCCCHHHHhhcccccchH---HHHHHH
Confidence 689999999999999999999999999999999999642211 223589999998643221111 111111 112222
Q ss_pred chhHHHHHHHHhhcccccCCCCccEEEeCC-Cchh--hHHHHHHcCCCeEEEecccHHHHHHHhhhhhhhhcCCCCCCCC
Q 012543 94 AAPFQDCLAKLLSNAEEKEEEPIACLITDA-SWFF--THDVAESLKLPRIVLRSLSVSSSLVYAALPVLSQKGYFPIQDS 170 (461)
Q Consensus 94 ~~~~~~~~~~l~~~~~~~~~~~pDlvi~D~-~~~~--a~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 170 (461)
...+.+.++++.+. . .+||+||+|. +..| +..+|+.+|||+|.+.+.+... ...+.|....
T Consensus 77 ~~~~~~~~~~l~~~-~----~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~-----------~~~~~p~~~~ 140 (415)
T 1iir_A 77 TEAIATQFDEIPAA-A----EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYV-----------PSPYYPPPPL 140 (415)
T ss_dssp HHHHHHHHHHHHHH-T----TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGS-----------CCSSSCCCC-
T ss_pred HHHHHHHHHHHHHH-h----cCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcC-----------CCcccCCccC
Confidence 22234445555431 1 7899999997 5678 8999999999999988774221 1111221110
Q ss_pred CCCcccCCCCCCCCCCCCCccccc-hhhh----HHHHHHHHHHh------------ccCccEEEEcChhHhhH-HHHHHH
Q 012543 171 HDLEAPVPELPPLRMKDIPVIETL-YQET----LHQFAAEAINQ------------MKASSGCIWNSVQELEQ-DSLAKF 232 (461)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~------------~~~~~~~l~~~~~~l~~-~~~~~~ 232 (461)
. ..++.-+..+. .... .... +.......... .... ..+.++++.+++ +
T Consensus 141 -~-----~~~~~~~~~n~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~----- 206 (415)
T 1iir_A 141 -G-----EPSTQDTIDIP--AQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPLQ----- 206 (415)
T ss_dssp --------------CHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCCC-----
T ss_pred -C-----ccccchHHHHH--HHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCCC-----
Confidence 0 00000000000 0000 0000 00011111111 1122 468888888874 2
Q ss_pred HhhCCCCccccCcCccCCCCCcCCCccCcchhhhhcCCCCCCeEEEEEccccccCCHHHHHHHHHHHHhCCCceEEEECC
Q 012543 233 HREFPIPSFPIGPFHKYYPASASSLLSQDRICISRLDKQAPKSVIYVSFGSIAAIDETKFLEVAWGLANSKVPFLWVVRP 312 (461)
Q Consensus 233 ~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~ 312 (461)
+.++ ++++|||+...+.. +.+.++.+|++. ++++|||++||.. ...+....++++++..+.+++|+++.
T Consensus 207 ~~~~--~~~~vG~~~~~~~~------~~~~~~~~~l~~--~~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v~~~g~ 275 (415)
T 1iir_A 207 PTDL--DAVQTGAWILPDER------PLSPELAAFLDA--GPPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVILSRGW 275 (415)
T ss_dssp CCSS--CCEECCCCCCCCCC------CCCHHHHHHHHT--SSCCEEEECC----CCHHHHHHHHHHHHHTTCCEEECTTC
T ss_pred cccC--CeEeeCCCccCccc------CCCHHHHHHHhh--CCCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 1112 68999999865321 233458899976 3589999999987 56778888999999999999998765
Q ss_pred CccCCchhcccCchhHHHHhcCCCceeeecChhhhhcCCCCCccccccCchHHHHHhhcCCccccCcccchhhhhHHHHH
Q 012543 313 GLVRGAEWIELLPRGFLEMLDGRGHIVKWAPQQEVLAHPATGAFWTHCGWNSTLESMCEGVPMICQPCHGEQMVIARYVS 392 (461)
Q Consensus 313 ~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~ 392 (461)
+... ...++++ +.+.+|+||.++|+.+++ ||||||+||++||+++|||+|++|...||+.||++++
T Consensus 276 ~~~~----~~~~~~~--------v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~ 341 (415)
T 1iir_A 276 ADLV----LPDDGAD--------CFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVA 341 (415)
T ss_dssp TTCC----CSSCGGG--------EEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHH
T ss_pred Cccc----ccCCCCC--------EEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCCCCccHHHHHHHH
Confidence 4311 1224444 488999999999999998 9999999999999999999999999999999999999
Q ss_pred HhhhceeecCC-ccCHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012543 393 DVWKVGLHLER-KLERGEVERAIRRVMVDAEGREMRNRAAILKEKLDLCTKQGSSSYQSLENLISYI 458 (461)
Q Consensus 393 ~~lG~G~~l~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~l 458 (461)
+ +|+|+.++. .++.++|.++|+++ +| ++|+++++++++++. ..++.+++++.+.+.+
T Consensus 342 ~-~g~g~~~~~~~~~~~~l~~~i~~l-~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~ 399 (415)
T 1iir_A 342 E-LGVGVAHDGPIPTFDSLSAALATA-LT---PETHARATAVAGTIR----TDGAAVAARLLLDAVS 399 (415)
T ss_dssp H-HTSEEECSSSSCCHHHHHHHHHHH-TS---HHHHHHHHHHHHHSC----SCHHHHHHHHHHHHHH
T ss_pred H-CCCcccCCcCCCCHHHHHHHHHHH-cC---HHHHHHHHHHHHHHh----hcChHHHHHHHHHHHH
Confidence 9 699999986 78999999999999 98 899999999999887 5666666666665544
No 9
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=8.5e-41 Score=331.15 Aligned_cols=389 Identities=15% Similarity=0.174 Sum_probs=262.1
Q ss_pred ccccccCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCcC----Cccc
Q 012543 6 ESHMQQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSPNPSNYPHFTFCSIQDGLSETEA----STTD 81 (461)
Q Consensus 6 ~~~m~~~~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 81 (461)
+|.-.++++|||+|++.++.||++|+++||++|+++||+|+|++++..... ....|+.+.+++..++.... ...+
T Consensus 12 ~~~~~~~~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~-~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 90 (415)
T 3rsc_A 12 SGHIEGRHMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEP-VRAAGATVVPYQSEIIDADAAEVFGSDD 90 (415)
T ss_dssp -------CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHH-HHHTTCEEEECCCSTTTCCHHHHHHSSS
T ss_pred cCCcCcccCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHH-HHhcCCEEEeccccccccccchhhcccc
Confidence 344444567899999999999999999999999999999999997533222 22358999999865443210 0001
Q ss_pred HHHHHHH-HHHHcchhHHHHHHHHhhcccccCCCCccEEEeC-CCchhhHHHHHHcCCCeEEEecccHHHHHHHhhhhhh
Q 012543 82 FVALISV-LHVKCAAPFQDCLAKLLSNAEEKEEEPIACLITD-ASWFFTHDVAESLKLPRIVLRSLSVSSSLVYAALPVL 159 (461)
Q Consensus 82 ~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~pDlvi~D-~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 159 (461)
....+.. +.......+.+..+.+.+ ++||+||+| ...+++..+|+.+|||+|.+.+....... +...+..
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~l~~-------~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~~~~ 162 (415)
T 3rsc_A 91 LGVRPHLMYLRENVSVLRATAEALDG-------DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEH-YSFSQDM 162 (415)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHSS-------SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSS-CCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-------cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCc-ccccccc
Confidence 1111111 222222223333333332 889999999 77788999999999999998754211000 0000000
Q ss_pred hhcCCCCCCCCCCCcccCCCCCCCCCCCCCccccchhhhHHHHHHHH------HHhccCc-cEEEEcChhHhhHHHHHHH
Q 012543 160 SQKGYFPIQDSHDLEAPVPELPPLRMKDIPVIETLYQETLHQFAAEA------INQMKAS-SGCIWNSVQELEQDSLAKF 232 (461)
Q Consensus 160 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~-~~~l~~~~~~l~~~~~~~~ 232 (461)
.+... . ..+.........+.+..... ....... +..+..+.+.++++
T Consensus 163 ~~~~~-~--------------------~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~----- 216 (415)
T 3rsc_A 163 VTLAG-T--------------------IDPLDLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIA----- 216 (415)
T ss_dssp HHHHT-C--------------------CCGGGCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTT-----
T ss_pred ccccc-c--------------------CChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCC-----
Confidence 00000 0 00000000011111111100 0111122 66677777766642
Q ss_pred HhhCCCCccccCcCccCCCCCcCCCccCcchhhhhcCCCCCCeEEEEEccccccCCHHHHHHHHHHHHhCCCceEEEECC
Q 012543 233 HREFPIPSFPIGPFHKYYPASASSLLSQDRICISRLDKQAPKSVIYVSFGSIAAIDETKFLEVAWGLANSKVPFLWVVRP 312 (461)
Q Consensus 233 ~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~ 312 (461)
...++.++.++||+...... ..+|....+++++||+++||......+.+..++++++..+.+++|.++.
T Consensus 217 ~~~~~~~~~~vGp~~~~~~~-----------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~ 285 (415)
T 3rsc_A 217 GDTFDDRFVFVGPCFDDRRF-----------LGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGG 285 (415)
T ss_dssp GGGCCTTEEECCCCCCCCGG-----------GCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTT
T ss_pred cccCCCceEEeCCCCCCccc-----------CcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCC
Confidence 34455668999988653221 3345554557899999999988766778889999999988888887775
Q ss_pred CccCCchhcccCchhHHHHhcCCCceeeecChhhhhcCCCCCccccccCchHHHHHhhcCCccccCcccchhhhhHHHHH
Q 012543 313 GLVRGAEWIELLPRGFLEMLDGRGHIVKWAPQQEVLAHPATGAFWTHCGWNSTLESMCEGVPMICQPCHGEQMVIARYVS 392 (461)
Q Consensus 313 ~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~ 392 (461)
+... +.+..+++ |+++.+|+|+.++|+++|+ +|||||.||+.||+++|+|+|++|...||+.||++++
T Consensus 286 ~~~~--~~l~~~~~--------~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~ 353 (415)
T 3rsc_A 286 QVDP--AALGDLPP--------NVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVD 353 (415)
T ss_dssp TSCG--GGGCCCCT--------TEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHH
T ss_pred CCCh--HHhcCCCC--------cEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHH
Confidence 4211 11233444 4589999999999999999 9999999999999999999999999999999999999
Q ss_pred HhhhceeecCC-ccCHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHc
Q 012543 393 DVWKVGLHLER-KLERGEVERAIRRVMVDAEGREMRNRAAILKEKLDLCTKQGSSSYQSLENLISYILS 460 (461)
Q Consensus 393 ~~lG~G~~l~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~l~~ 460 (461)
+ .|+|+.+.. ++++++|.++|.++++| ++++++++++++.+. +.++.+++++.+.+.+++
T Consensus 354 ~-~g~g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 354 Q-LGLGAVLPGEKADGDTLLAAVGAVAAD---PALLARVEAMRGHVR----RAGGAARAADAVEAYLAR 414 (415)
T ss_dssp H-HTCEEECCGGGCCHHHHHHHHHHHHTC---HHHHHHHHHHHHHHH----HSCHHHHHHHHHHHHHHH
T ss_pred H-cCCEEEcccCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHhhc
Confidence 9 599999987 78999999999999999 899999999999998 678889999988888764
No 10
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.1e-41 Score=337.61 Aligned_cols=370 Identities=11% Similarity=0.008 Sum_probs=250.8
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCcC--CcccHHHHHHHHHHH
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSPNPSNYPHFTFCSIQDGLSETEA--STTDFVALISVLHVK 92 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 92 (461)
|||++++.++.||++|+++||++|+++||+|+|++++..... ....|+++++++........ ........ +...
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~-v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 76 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEER-LAEVGVPHVPVGLPQHMMLQEGMPPPPPEE---EQRL 76 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHH-HHHHTCCEEECSCCGGGCCCTTSCCCCHHH---HHHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHH-HHHcCCeeeecCCCHHHHHhhccccchhHH---HHHH
Confidence 689999999999999999999999999999999998632211 12357899998854321111 01111111 1111
Q ss_pred cchhHHHHHHHHhhcccccCCCCccEEEeCC-Cchh--hHHHHHHcCCCeEEEecccHHHHHHHhhhhhhhhcCCCCCCC
Q 012543 93 CAAPFQDCLAKLLSNAEEKEEEPIACLITDA-SWFF--THDVAESLKLPRIVLRSLSVSSSLVYAALPVLSQKGYFPIQD 169 (461)
Q Consensus 93 ~~~~~~~~~~~l~~~~~~~~~~~pDlvi~D~-~~~~--a~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 169 (461)
....+.+.++.+.+. . .+||+||+|. +.++ +..+|+.+|||+|.+.+.+... ...+.| ..
T Consensus 77 ~~~~~~~~~~~l~~~-~----~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~-----------~~~~~p-~~ 139 (416)
T 1rrv_A 77 AAMTVEMQFDAVPGA-A----EGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYL-----------ASPHLP-PA 139 (416)
T ss_dssp HHHHHHHHHHHHHHH-T----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGS-----------CCSSSC-CC
T ss_pred HHHHHHHHHHHHHHH-h----cCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCC-----------CCcccC-CC
Confidence 222234444555421 1 7899999996 4566 8889999999999987663211 011111 00
Q ss_pred CCCCcccCCCCCCCCCCCCCcccc-c-hhhh----HHHHHHHHH------------HhccCccEEEEcChhHhhHHHHHH
Q 012543 170 SHDLEAPVPELPPLRMKDIPVIET-L-YQET----LHQFAAEAI------------NQMKASSGCIWNSVQELEQDSLAK 231 (461)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~----~~~~~~~~~------------~~~~~~~~~l~~~~~~l~~~~~~~ 231 (461)
. +++ ........... . .... +........ +..... .++.++.+.++++
T Consensus 140 ---~-----~~~-~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~---- 205 (416)
T 1rrv_A 140 ---Y-----DEP-TTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPL---- 205 (416)
T ss_dssp ---B-----CSC-CCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCC----
T ss_pred ---C-----CCC-CCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCC----
Confidence 0 000 00000000000 0 0000 000011111 111222 5788888888753
Q ss_pred HHhhCCCCccccCcCccCCCCCcCCCccCcchhhhhcCCCCCCeEEEEEcccccc-CCHHHHHHHHHHHHhCCCceEEEE
Q 012543 232 FHREFPIPSFPIGPFHKYYPASASSLLSQDRICISRLDKQAPKSVIYVSFGSIAA-IDETKFLEVAWGLANSKVPFLWVV 310 (461)
Q Consensus 232 ~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~a~~~~~~~~i~~~ 310 (461)
+.+ .++++|||+..+... +.+.++.+|++. ++++|||++||... ...+.+..++++++..+.+++|++
T Consensus 206 -~~~--~~~~~vG~~~~~~~~------~~~~~~~~~l~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~~~ 274 (416)
T 1rrv_A 206 -QPD--VDAVQTGAWLLSDER------PLPPELEAFLAA--GSPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSR 274 (416)
T ss_dssp -CSS--CCCEECCCCCCCCCC------CCCHHHHHHHHS--SSCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred -CCC--CCeeeECCCccCccC------CCCHHHHHHHhc--CCCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEEEe
Confidence 111 168899999865321 223458899976 35889999999864 345677889999999999999988
Q ss_pred CCCccCCchhcccCchhHHHHhcCCCceeeecChhhhhcCCCCCccccccCchHHHHHhhcCCccccCcccchhhhhHHH
Q 012543 311 RPGLVRGAEWIELLPRGFLEMLDGRGHIVKWAPQQEVLAHPATGAFWTHCGWNSTLESMCEGVPMICQPCHGEQMVIARY 390 (461)
Q Consensus 311 ~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~ 390 (461)
+.+... ...+| +|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||+.||++
T Consensus 275 g~~~~~----~~~~~--------~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~ 340 (416)
T 1rrv_A 275 GWTELV----LPDDR--------DDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGR 340 (416)
T ss_dssp TTTTCC----CSCCC--------TTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHH
T ss_pred CCcccc----ccCCC--------CCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCCCCcHHHHHH
Confidence 765311 12233 45589999999999999999 99999999999999999999999999999999999
Q ss_pred HHHhhhceeecCC-ccCHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHH
Q 012543 391 VSDVWKVGLHLER-KLERGEVERAIRRVMVDAEGREMRNRAAILKEKLDLCTKQGSSSYQSLENL 454 (461)
Q Consensus 391 v~~~lG~G~~l~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l 454 (461)
+++ +|+|+.+.. ..+.++|.++|+++ +| ++|+++++++++++. ..++. ++++.+
T Consensus 341 l~~-~g~g~~~~~~~~~~~~l~~~i~~l-~~---~~~~~~~~~~~~~~~----~~~~~-~~~~~i 395 (416)
T 1rrv_A 341 VAA-LGIGVAHDGPTPTFESLSAALTTV-LA---PETRARAEAVAGMVL----TDGAA-AAADLV 395 (416)
T ss_dssp HHH-HTSEEECSSSCCCHHHHHHHHHHH-TS---HHHHHHHHHHTTTCC----CCHHH-HHHHHH
T ss_pred HHH-CCCccCCCCCCCCHHHHHHHHHHh-hC---HHHHHHHHHHHHHHh----hcCcH-HHHHHH
Confidence 999 699999986 78999999999999 99 899999999998887 55566 666666
No 11
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=4.2e-39 Score=317.42 Aligned_cols=380 Identities=17% Similarity=0.186 Sum_probs=258.9
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCc----CCcccHHHHHHH-H
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSPNPSNYPHFTFCSIQDGLSETE----ASTTDFVALISV-L 89 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~ 89 (461)
+||+|++.++.||++|+++||++|+++||+|+|++++..... ....|+++.+++..++... ....+....+.. +
T Consensus 5 ~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~-~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (402)
T 3ia7_A 5 RHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADE-VKAAGAEVVLYKSEFDTFHVPEVVKQEDAETQLHLVY 83 (402)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHH-HHHTTCEEEECCCGGGTSSSSSSSCCTTHHHHHHHHH
T ss_pred CEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHH-HHHcCCEEEecccccccccccccccccchHHHHHHHH
Confidence 399999999999999999999999999999999998532221 1235799999875332211 111223333333 3
Q ss_pred HHHcchhHHHHHHHHhhcccccCCCCccEEEeC-CCchhhHHHHHHcCCCeEEEecccHHHHHHHhhhhhhhhcCCCCCC
Q 012543 90 HVKCAAPFQDCLAKLLSNAEEKEEEPIACLITD-ASWFFTHDVAESLKLPRIVLRSLSVSSSLVYAALPVLSQKGYFPIQ 168 (461)
Q Consensus 90 ~~~~~~~~~~~~~~l~~~~~~~~~~~pDlvi~D-~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 168 (461)
.......+.+..+.+.+ ++||+||+| ....++..+|+.+|||+|.+.+....... +...+...+... . .
T Consensus 84 ~~~~~~~~~~l~~~l~~-------~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~~~~~~~~~-~-~ 153 (402)
T 3ia7_A 84 VRENVAILRAAEEALGD-------NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEH-YSLFKELWKSNG-Q-R 153 (402)
T ss_dssp HHHHHHHHHHHHHHHTT-------CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTT-BCHHHHHHHHHT-C-C
T ss_pred HHHHHHHHHHHHHHHhc-------cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcc-cccccccccccc-c-c
Confidence 33333333333333333 889999999 77888999999999999998754221000 000000000000 0 0
Q ss_pred CCCCCcccCCCCCCCCCCCCCccccchhhhHHHHHHH------HHHhccCc-cEEEEcChhHhhHHHHHHHHhhCCCCcc
Q 012543 169 DSHDLEAPVPELPPLRMKDIPVIETLYQETLHQFAAE------AINQMKAS-SGCIWNSVQELEQDSLAKFHREFPIPSF 241 (461)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~-~~~l~~~~~~l~~~~~~~~~~~~~~~~~ 241 (461)
. + .........+.+.... ........ +..+..+.+.++++ ...++.++.
T Consensus 154 ~-----------~--------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~~ 209 (402)
T 3ia7_A 154 H-----------P--------ADVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPF-----AETFDERFA 209 (402)
T ss_dssp C-----------G--------GGSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTT-----GGGCCTTEE
T ss_pred C-----------h--------hhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCc-----cccCCCCeE
Confidence 0 0 0000000001111000 00111112 55666666666542 344456689
Q ss_pred ccCcCccCCCCCcCCCccCcchhhhhcCCCCCCeEEEEEccccccCCHHHHHHHHHHHHhCCCceEEEECCCccCCchhc
Q 012543 242 PIGPFHKYYPASASSLLSQDRICISRLDKQAPKSVIYVSFGSIAAIDETKFLEVAWGLANSKVPFLWVVRPGLVRGAEWI 321 (461)
Q Consensus 242 ~vG~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~ 321 (461)
++||+...... ..+|+...+++++||+++||......+.+..++++++..+.++++.++.+... +.+
T Consensus 210 ~vGp~~~~~~~-----------~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~ 276 (402)
T 3ia7_A 210 FVGPTLTGRDG-----------QPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFLDP--AVL 276 (402)
T ss_dssp ECCCCCCC---------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTSCG--GGG
T ss_pred EeCCCCCCccc-----------CCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcCCh--hhh
Confidence 99987653221 23455445578999999999987767788899999998888888877654211 112
Q ss_pred ccCchhHHHHhcCCCceeeecChhhhhcCCCCCccccccCchHHHHHhhcCCccccCcc-cchhhhhHHHHHHhhhceee
Q 012543 322 ELLPRGFLEMLDGRGHIVKWAPQQEVLAHPATGAFWTHCGWNSTLESMCEGVPMICQPC-HGEQMVIARYVSDVWKVGLH 400 (461)
Q Consensus 322 ~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~-~~DQ~~na~~v~~~lG~G~~ 400 (461)
..++ +|+++.+|+|+.++|+++|+ +|||||.||+.||+++|+|+|++|. ..||+.||+++++ .|+|..
T Consensus 277 ~~~~--------~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~-~g~g~~ 345 (402)
T 3ia7_A 277 GPLP--------PNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIE-LGLGSV 345 (402)
T ss_dssp CSCC--------TTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHH-TTSEEE
T ss_pred CCCC--------CcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHH-cCCEEE
Confidence 3344 44589999999999999999 9999999999999999999999999 9999999999999 599999
Q ss_pred cCC-ccCHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHc
Q 012543 401 LER-KLERGEVERAIRRVMVDAEGREMRNRAAILKEKLDLCTKQGSSSYQSLENLISYILS 460 (461)
Q Consensus 401 l~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~l~~ 460 (461)
+.. +++++.|.++|.++++| ++++++++++++.+. +.++..++++.+.+.+++
T Consensus 346 ~~~~~~~~~~l~~~~~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 346 LRPDQLEPASIREAVERLAAD---SAVRERVRRMQRDIL----SSGGPARAADEVEAYLGR 399 (402)
T ss_dssp CCGGGCSHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----TSCHHHHHHHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHh----hCChHHHHHHHHHHHHhh
Confidence 987 78999999999999999 899999999999988 778888888888887653
No 12
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=2e-40 Score=326.78 Aligned_cols=363 Identities=13% Similarity=0.065 Sum_probs=247.3
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCcC-CcccHHHHHHHHHHHc
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSPNPSNYPHFTFCSIQDGLSETEA-STTDFVALISVLHVKC 93 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 93 (461)
|||+|++.++.||++|+++||++|+++||+|+|++++. ........|+.+.+++........ ...........+...
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~-~~~~v~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~- 78 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPD-YVERCAEVGVPMVPVGRAVRAGAREPGELPPGAAEVVTEV- 78 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGG-GHHHHHHTTCCEEECSSCSSGGGSCTTCCCTTCGGGHHHH-
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHH-HHHHHHHcCCceeecCCCHHHHhccccCCHHHHHHHHHHH-
Confidence 68999999999999999999999999999999999853 222222368899999754321100 000000011111111
Q ss_pred chhHHHHHHHHhhcccccCCCCccEEEeCCCchhh---HHHHHHcCCCeEEEecccHHHHHHHhhhhhhhhcCCCCCCCC
Q 012543 94 AAPFQDCLAKLLSNAEEKEEEPIACLITDASWFFT---HDVAESLKLPRIVLRSLSVSSSLVYAALPVLSQKGYFPIQDS 170 (461)
Q Consensus 94 ~~~~~~~~~~l~~~~~~~~~~~pDlvi~D~~~~~a---~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 170 (461)
+.+.++.+.... .+||+||+|..+..+ ..+|+.+|||++.+..++....+....
T Consensus 79 ---~~~~~~~l~~~~-----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~--------------- 135 (404)
T 3h4t_A 79 ---VAEWFDKVPAAI-----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQ--------------- 135 (404)
T ss_dssp ---HHHHHHHHHHHH-----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCH---------------
T ss_pred ---HHHHHHHHHHHh-----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHH---------------
Confidence 222222322222 459999999665444 689999999999988774421000000
Q ss_pred CCCcccCCCCCCCCCCCCCccccchhhhHHHH----HHHHHHhcc-----------CccEEEEcChhHhhHHHHHHHHhh
Q 012543 171 HDLEAPVPELPPLRMKDIPVIETLYQETLHQF----AAEAINQMK-----------ASSGCIWNSVQELEQDSLAKFHRE 235 (461)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-----------~~~~~l~~~~~~l~~~~~~~~~~~ 235 (461)
...........+. ......... ..+..+.+..+.+.+. +.
T Consensus 136 -------------------~~~~~~~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~------~~ 190 (404)
T 3h4t_A 136 -------------------AERDMYNQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPL------RP 190 (404)
T ss_dssp -------------------HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCC------CT
T ss_pred -------------------HHHHHHHHHHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCC------CC
Confidence 0000000000000 000000000 0122344566655431 22
Q ss_pred CCCCccccCcCccCCCCCcCCCccCcchhhhhcCCCCCCeEEEEEccccccCCHHHHHHHHHHHHhCCCceEEEECCCcc
Q 012543 236 FPIPSFPIGPFHKYYPASASSLLSQDRICISRLDKQAPKSVIYVSFGSIAAIDETKFLEVAWGLANSKVPFLWVVRPGLV 315 (461)
Q Consensus 236 ~~~~~~~vG~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~ 315 (461)
++.++.++|++..+... .++ +++.+|++. ++++|||++||... ..+.+..++++++..+.++||+.+....
T Consensus 191 ~~~~~~~~G~~~~~~~~----~~~--~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~~~ 261 (404)
T 3h4t_A 191 TDLGTVQTGAWILPDQR----PLS--AELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWAGL 261 (404)
T ss_dssp TCCSCCBCCCCCCCCCC----CCC--HHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTTTC
T ss_pred CCCCeEEeCccccCCCC----CCC--HHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCccc
Confidence 33458899987755432 333 448889875 57899999999987 6778889999999999999998876531
Q ss_pred CCchhcccCchhHHHHhcCCCceeeecChhhhhcCCCCCccccccCchHHHHHhhcCCccccCcccchhhhhHHHHHHhh
Q 012543 316 RGAEWIELLPRGFLEMLDGRGHIVKWAPQQEVLAHPATGAFWTHCGWNSTLESMCEGVPMICQPCHGEQMVIARYVSDVW 395 (461)
Q Consensus 316 ~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~l 395 (461)
. ...++ +|+++.+|+||.++|+++++ ||||||+||+.|++++|||+|++|+.+||+.||+++++ .
T Consensus 262 ~----~~~~~--------~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~-~ 326 (404)
T 3h4t_A 262 G----RIDEG--------DDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVAD-L 326 (404)
T ss_dssp C----CSSCC--------TTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH-H
T ss_pred c----cccCC--------CCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHH-C
Confidence 1 11123 45589999999999999999 99999999999999999999999999999999999999 5
Q ss_pred hceeecCC-ccCHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHc
Q 012543 396 KVGLHLER-KLERGEVERAIRRVMVDAEGREMRNRAAILKEKLDLCTKQGSSSYQSLENLISYILS 460 (461)
Q Consensus 396 G~G~~l~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~l~~ 460 (461)
|+|..+.. .++.+.|.++|++++++ +|+++++++++.+. . .+.+++++.+.+.+++
T Consensus 327 G~g~~l~~~~~~~~~l~~ai~~ll~~----~~~~~~~~~~~~~~----~-~~~~~~~~~i~~~~~~ 383 (404)
T 3h4t_A 327 GVGVAHDGPTPTVESLSAALATALTP----GIRARAAAVAGTIR----T-DGTTVAAKLLLEAISR 383 (404)
T ss_dssp TSEEECSSSSCCHHHHHHHHHHHTSH----HHHHHHHHHHTTCC----C-CHHHHHHHHHHHHHHC
T ss_pred CCEeccCcCCCCHHHHHHHHHHHhCH----HHHHHHHHHHHHHh----h-hHHHHHHHHHHHHHhh
Confidence 99999987 78999999999999973 79999999999887 6 7788888888777653
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=2.1e-39 Score=323.50 Aligned_cols=372 Identities=12% Similarity=0.119 Sum_probs=243.3
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCC-Cc---------------
Q 012543 13 KGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSPNPSNYPHFTFCSIQDGLSE-TE--------------- 76 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--------------- 76 (461)
+.|||+|++.|+.||++|+++||++|+++||+|+|++++.. .......|+++++++..... ..
T Consensus 19 ~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~-~~~v~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 97 (441)
T 2yjn_A 19 SHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPAL-TEDITAAGLTAVPVGTDVDLVDFMTHAGHDIIDYVRSL 97 (441)
T ss_dssp CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGG-HHHHHTTTCCEEECSCCCCHHHHHHHTTHHHHHHHTTC
T ss_pred CccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchh-HHHHHhCCCceeecCCccchHHHhhhhhcccccccccc
Confidence 35799999999999999999999999999999999998643 22222368999999854310 00
Q ss_pred C-----Cc-ccHH---HHHHHHHHHcc-----h-hHHHHHHHHhhcccccCCCCccEEEeCCCchhhHHHHHHcCCCeEE
Q 012543 77 A-----ST-TDFV---ALISVLHVKCA-----A-PFQDCLAKLLSNAEEKEEEPIACLITDASWFFTHDVAESLKLPRIV 141 (461)
Q Consensus 77 ~-----~~-~~~~---~~~~~~~~~~~-----~-~~~~~~~~l~~~~~~~~~~~pDlvi~D~~~~~a~~~A~~lgiP~v~ 141 (461)
. .. .... .....+...+. . .+.+.++.+.+ ++||+||+|.++.++..+|+.+|||+|.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~pDlVv~d~~~~~~~~aA~~lgiP~v~ 170 (441)
T 2yjn_A 98 DFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK-------WRPDLVIWEPLTFAAPIAAAVTGTPHAR 170 (441)
T ss_dssp CCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH-------HCCSEEEECTTCTHHHHHHHHHTCCEEE
T ss_pred cccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh-------cCCCEEEecCcchhHHHHHHHcCCCEEE
Confidence 0 00 0111 11111222211 1 33444444433 7899999998878899999999999999
Q ss_pred EecccHHHHHHHhhhhhhhhcCCCCCCCCCCCcccCCCCCCCCCCCCCccccchhhhHHHHHHHHHHhcc---------C
Q 012543 142 LRSLSVSSSLVYAALPVLSQKGYFPIQDSHDLEAPVPELPPLRMKDIPVIETLYQETLHQFAAEAINQMK---------A 212 (461)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~ 212 (461)
+...+.........+ .....+.+... ....+.+.+......+. .
T Consensus 171 ~~~~~~~~~~~~~~~--~~~~~~~~~~~-------------------------~~~~~~~~l~~~~~~~g~~~~~~~~~~ 223 (441)
T 2yjn_A 171 LLWGPDITTRARQNF--LGLLPDQPEEH-------------------------REDPLAEWLTWTLEKYGGPAFDEEVVV 223 (441)
T ss_dssp ECSSCCHHHHHHHHH--HHHGGGSCTTT-------------------------CCCHHHHHHHHHHHHTTCCCCCGGGTS
T ss_pred EecCCCcchhhhhhh--hhhcccccccc-------------------------ccchHHHHHHHHHHHcCCCCCCccccC
Confidence 865532211111100 01111111000 00001111111111111 1
Q ss_pred ccEEEEcChhHhhHHHHHHHHhhCC-CCccccCcCccCCCCCcCCCccCcchhhhhcCCCCCCeEEEEEccccccC---C
Q 012543 213 SSGCIWNSVQELEQDSLAKFHREFP-IPSFPIGPFHKYYPASASSLLSQDRICISRLDKQAPKSVIYVSFGSIAAI---D 288 (461)
Q Consensus 213 ~~~~l~~~~~~l~~~~~~~~~~~~~-~~~~~vG~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~---~ 288 (461)
.+..+..+.+.++++ .+++ .++.++++ . ...++.+|++..+++++|||++||.... .
T Consensus 224 ~~~~l~~~~~~~~~~------~~~~~~~~~~~~~---~----------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~ 284 (441)
T 2yjn_A 224 GQWTIDPAPAAIRLD------TGLKTVGMRYVDY---N----------GPSVVPEWLHDEPERRRVCLTLGISSRENSIG 284 (441)
T ss_dssp CSSEEECSCGGGSCC------CCCCEEECCCCCC---C----------SSCCCCGGGSSCCSSCEEEEEC----------
T ss_pred CCeEEEecCccccCC------CCCCCCceeeeCC---C----------CCcccchHhhcCCCCCEEEEECCCCcccccCh
Confidence 233444454444321 1111 11222211 1 1122567887656778999999998753 3
Q ss_pred HHHHHHHHHHHHhCCCceEEEECCCccCCchhcccCchhHHHHhcCCCceeeecChhhhhcCCCCCccccccCchHHHHH
Q 012543 289 ETKFLEVAWGLANSKVPFLWVVRPGLVRGAEWIELLPRGFLEMLDGRGHIVKWAPQQEVLAHPATGAFWTHCGWNSTLES 368 (461)
Q Consensus 289 ~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~gs~~ea 368 (461)
.+.+..++++++..+.++||+.++..... +..++ +|+++.+|+|+.++|+.+++ ||||||+||++||
T Consensus 285 ~~~~~~~~~al~~~~~~~v~~~g~~~~~~---l~~~~--------~~v~~~~~~~~~~ll~~ad~--~V~~~G~~t~~Ea 351 (441)
T 2yjn_A 285 QVSIEELLGAVGDVDAEIIATFDAQQLEG---VANIP--------DNVRTVGFVPMHALLPTCAA--TVHHGGPGSWHTA 351 (441)
T ss_dssp CCSTTTTHHHHHTSSSEEEECCCTTTTSS---CSSCC--------SSEEECCSCCHHHHGGGCSE--EEECCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEEECCcchhh---hccCC--------CCEEEecCCCHHHHHhhCCE--EEECCCHHHHHHH
Confidence 35667788999888899988877543111 22233 45589999999999999999 9999999999999
Q ss_pred hhcCCccccCcccchhhhhHHHHHHhhhceeecCC-ccCHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhhcCCCh
Q 012543 369 MCEGVPMICQPCHGEQMVIARYVSDVWKVGLHLER-KLERGEVERAIRRVMVDAEGREMRNRAAILKEKLDLCTKQGSSS 447 (461)
Q Consensus 369 l~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~l~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~ 447 (461)
+++|||+|++|...||+.||+++++ .|+|+.+.. ++++++|.++|.++++| ++++++++++++.+. ...+.
T Consensus 352 ~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~~ 423 (441)
T 2yjn_A 352 AIHGVPQVILPDGWDTGVRAQRTQE-FGAGIALPVPELTPDQLRESVKRVLDD---PAHRAGAARMRDDML----AEPSP 423 (441)
T ss_dssp HHTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCTTTCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----TSCCH
T ss_pred HHhCCCEEEeCCcccHHHHHHHHHH-cCCEEEcccccCCHHHHHHHHHHHhcC---HHHHHHHHHHHHHHH----cCCCH
Confidence 9999999999999999999999999 599999987 78999999999999999 899999999999998 67888
Q ss_pred HHHHHHHHHHHH
Q 012543 448 YQSLENLISYIL 459 (461)
Q Consensus 448 ~~~~~~l~~~l~ 459 (461)
.+.++.+.+.+.
T Consensus 424 ~~~~~~i~~~~~ 435 (441)
T 2yjn_A 424 AEVVGICEELAA 435 (441)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888888877654
No 14
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=3.5e-38 Score=313.82 Aligned_cols=379 Identities=13% Similarity=0.133 Sum_probs=249.7
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCcCC----cccHHHHHHHH
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSPNPSNYPHFTFCSIQDGLSETEAS----TTDFVALISVL 89 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 89 (461)
++||++++.++.||++|+++|+++|+++||+|++++++..... ....|+++++++...+..... ..+....+..+
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADK-VAATGPRPVLYHSTLPGPDADPEAWGSTLLDNVEPF 85 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHH-HHTTSCEEEECCCCSCCTTSCGGGGCSSHHHHHHHH
T ss_pred cceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHH-HHhCCCEEEEcCCcCccccccccccchhhHHHHHHH
Confidence 4699999999999999999999999999999999998643211 123589999988654322211 12222333222
Q ss_pred HHHcchhHHHHHHHHhhcccccCCCCccEEEeCCCchhhHHHHHHcCCCeEEEecccHHHHHHHhhhhhhhhcCCCCCCC
Q 012543 90 HVKCAAPFQDCLAKLLSNAEEKEEEPIACLITDASWFFTHDVAESLKLPRIVLRSLSVSSSLVYAALPVLSQKGYFPIQD 169 (461)
Q Consensus 90 ~~~~~~~~~~~~~~l~~~~~~~~~~~pDlvi~D~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 169 (461)
...+...+....+.+.+ ++||+||+|....++..+|+.+|||+|.+.+..............+..
T Consensus 86 ~~~~~~~~~~l~~~l~~-------~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~-------- 150 (430)
T 2iyf_A 86 LNDAIQALPQLADAYAD-------DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPMW-------- 150 (430)
T ss_dssp HHHHHHHHHHHHHHHTT-------SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHHH--------
T ss_pred HHHHHHHHHHHHHHhhc-------cCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccchh--------
Confidence 23232323333333332 789999999877788999999999999987653200000000000000
Q ss_pred CCCCcccCCCCCCCCCCCCCccccchhhhHHHHHHH------HHHhccCccEEEEcChhHhhHHHHHHHHhhCCCC-ccc
Q 012543 170 SHDLEAPVPELPPLRMKDIPVIETLYQETLHQFAAE------AINQMKASSGCIWNSVQELEQDSLAKFHREFPIP-SFP 242 (461)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~-~~~ 242 (461)
....+. +... .....+.+.... ........+.++.++.+.++++ ...++.+ +++
T Consensus 151 -----~~~~~~--------~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~v~~ 211 (430)
T 2iyf_A 151 -----REPRQT--------ERGR-AYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPH-----ADRVDEDVYTF 211 (430)
T ss_dssp -----HHHHHS--------HHHH-HHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTT-----GGGSCTTTEEE
T ss_pred -----hhhccc--------hHHH-HHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCC-----cccCCCccEEE
Confidence 000000 0000 000000111100 0011124567888888888753 1334556 899
Q ss_pred cCcCccCCCCCcCCCccCcchhhhhcCCCCCCeEEEEEccccccCCHHHHHHHHHHHHhC-CCceEEEECCCccCCchhc
Q 012543 243 IGPFHKYYPASASSLLSQDRICISRLDKQAPKSVIYVSFGSIAAIDETKFLEVAWGLANS-KVPFLWVVRPGLVRGAEWI 321 (461)
Q Consensus 243 vG~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~ 321 (461)
+||....... ..+|....+++++||+++||......+.+..++++++.. +.+++|+++.+... +.+
T Consensus 212 vG~~~~~~~~-----------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~--~~l 278 (430)
T 2iyf_A 212 VGACQGDRAE-----------EGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKVTP--AEL 278 (430)
T ss_dssp CCCCC----------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---CG--GGG
T ss_pred eCCcCCCCCC-----------CCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCCCh--HHh
Confidence 9986532111 123554445688999999998855567788899999885 77887877654211 112
Q ss_pred ccCchhHHHHhcCCCceeeecChhhhhcCCCCCccccccCchHHHHHhhcCCccccCcccchhhhhHHHHHHhhhceeec
Q 012543 322 ELLPRGFLEMLDGRGHIVKWAPQQEVLAHPATGAFWTHCGWNSTLESMCEGVPMICQPCHGEQMVIARYVSDVWKVGLHL 401 (461)
Q Consensus 322 ~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~l 401 (461)
..+ ++|+.+.+|+|+.++|+++|+ ||||||+||+.||+++|+|+|++|..+||..||+++++ .|+|+.+
T Consensus 279 ~~~--------~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~-~g~g~~~ 347 (430)
T 2iyf_A 279 GEL--------PDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQG-LGVARKL 347 (430)
T ss_dssp CSC--------CTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-TTSEEEC
T ss_pred ccC--------CCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHH-cCCEEEc
Confidence 223 345589999999999999998 99999999999999999999999999999999999999 5999998
Q ss_pred CC-ccCHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012543 402 ER-KLERGEVERAIRRVMVDAEGREMRNRAAILKEKLDLCTKQGSSSYQSLENLISYI 458 (461)
Q Consensus 402 ~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~l 458 (461)
.. .++.++|.++|.++++| +.++++++++++.+. +.++.++.++.+.+.+
T Consensus 348 ~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~ 398 (430)
T 2iyf_A 348 ATEEATADLLRETALALVDD---PEVARRLRRIQAEMA----QEGGTRRAADLIEAEL 398 (430)
T ss_dssp CCC-CCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----HHCHHHHHHHHHHTTS
T ss_pred CCCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH----hcCcHHHHHHHHHHHh
Confidence 87 78999999999999999 889999999998887 3456666666665544
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=9.4e-38 Score=306.03 Aligned_cols=352 Identities=13% Similarity=0.069 Sum_probs=246.2
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCc-----------CCcc-cH
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSPNPSNYPHFTFCSIQDGLSETE-----------ASTT-DF 82 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~-~~ 82 (461)
|||++++.++.||++|+++|+++|+++||+|++++++... ......|++++.++....... .... ..
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMG-PVVTGVGLPAVATTDLPIRHFITTDREGRPEAIPSDPVA 79 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHTTCCEEESCSSCHHHHHHBCTTSCBCCCCCSHHH
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHH-HHHHhCCCEEEEeCCcchHHHHhhhcccCccccCcchHH
Confidence 6899999999999999999999999999999999985321 111225788888875321000 0010 11
Q ss_pred HHHH-HH-HHHHcchhHHHHHHHHhhcccccCCCCccEEEeCCCchhhHHHHHHcCCCeEEEecccHHHHHHHhhhhhhh
Q 012543 83 VALI-SV-LHVKCAAPFQDCLAKLLSNAEEKEEEPIACLITDASWFFTHDVAESLKLPRIVLRSLSVSSSLVYAALPVLS 160 (461)
Q Consensus 83 ~~~~-~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~pDlvi~D~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 160 (461)
...+ .. +...+...+.+..+.+.+ ++||+||+|.+..++..+|+.+|||+|.+...+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~~l~~-------~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~------------ 140 (384)
T 2p6p_A 80 QARFTGRWFARMAASSLPRMLDFSRA-------WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD------------ 140 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-------HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC------------
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhc-------cCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc------------
Confidence 1111 11 112222223333333333 78999999987788889999999999987533100
Q ss_pred hcCCCCCCCCCCCcccCCCCCCCCCCCCCccccchhhhHHHHHHHHHHhc-----cCccEEEEcChhHhhHHHHHHHHhh
Q 012543 161 QKGYFPIQDSHDLEAPVPELPPLRMKDIPVIETLYQETLHQFAAEAINQM-----KASSGCIWNSVQELEQDSLAKFHRE 235 (461)
Q Consensus 161 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~l~~~~~~~~~~~ 235 (461)
+ . . + ............... ...+.++.++.+.++++. .
T Consensus 141 -----~--~---------~--------~-------~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~------~ 183 (384)
T 2p6p_A 141 -----A--D---------G--------I-------HPGADAELRPELSELGLERLPAPDLFIDICPPSLRPAN------A 183 (384)
T ss_dssp -----C--T---------T--------T-------HHHHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCTT------S
T ss_pred -----c--c---------h--------h-------hHHHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCCC------C
Confidence 0 0 0 0 000111111111111 114678888888876421 1
Q ss_pred CC-CCccccCcCccCCCCCcCCCccCcchhhhhcCCCCCCeEEEEEccccccC-----CHHHHHHHHHHHHhCCCceEEE
Q 012543 236 FP-IPSFPIGPFHKYYPASASSLLSQDRICISRLDKQAPKSVIYVSFGSIAAI-----DETKFLEVAWGLANSKVPFLWV 309 (461)
Q Consensus 236 ~~-~~~~~vG~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~-----~~~~~~~~~~a~~~~~~~~i~~ 309 (461)
++ .++.+++ + . . ..++.+|++..+++++||+++||.... +.+.+..++++++..+.+++|+
T Consensus 184 ~~~~~~~~~~-~--~-~---------~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~ 250 (384)
T 2p6p_A 184 APARMMRHVA-T--S-R---------QCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVA 250 (384)
T ss_dssp CCCEECCCCC-C--C-C---------CCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEE
T ss_pred CCCCceEecC-C--C-C---------CCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEE
Confidence 11 1244442 1 1 0 112567886545678999999998864 4577888999999989999888
Q ss_pred ECCCccCCchhcccCchhHHHHhcCCCceeeecChhhhhcCCCCCccccccCchHHHHHhhcCCccccCcccchhhhhHH
Q 012543 310 VRPGLVRGAEWIELLPRGFLEMLDGRGHIVKWAPQQEVLAHPATGAFWTHCGWNSTLESMCEGVPMICQPCHGEQMVIAR 389 (461)
Q Consensus 310 ~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~ 389 (461)
.++.. . +.+ +..++|+.+ +|+||.++|+++++ ||||||+||++||+++|+|+|++|...||+.||+
T Consensus 251 ~g~~~------~----~~l-~~~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~ 316 (384)
T 2p6p_A 251 APDTV------A----EAL-RAEVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPAR 316 (384)
T ss_dssp CCHHH------H----HHH-HHHCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHH
T ss_pred eCCCC------H----Hhh-CCCCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHHHH
Confidence 76421 1 111 124567899 99999999999998 9999999999999999999999999999999999
Q ss_pred HHHHhhhceeecCC-ccCHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012543 390 YVSDVWKVGLHLER-KLERGEVERAIRRVMVDAEGREMRNRAAILKEKLDLCTKQGSSSYQSLENLISYI 458 (461)
Q Consensus 390 ~v~~~lG~G~~l~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~l 458 (461)
++++ .|+|+.+.. ..+.++|.++|+++++| ++++++++++++.+. ...+.+++++.+.+++
T Consensus 317 ~~~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~ 378 (384)
T 2p6p_A 317 RVAD-YGAAIALLPGEDSTEAIADSCQELQAK---DTYARRAQDLSREIS----GMPLPATVVTALEQLA 378 (384)
T ss_dssp HHHH-HTSEEECCTTCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----TSCCHHHHHHHHHHHH
T ss_pred HHHH-CCCeEecCcCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH----hCCCHHHHHHHHHHHh
Confidence 9999 599999886 78999999999999999 899999999999998 7778888888887765
No 16
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=3.8e-36 Score=295.99 Aligned_cols=356 Identities=13% Similarity=0.154 Sum_probs=238.2
Q ss_pred CCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCc---------------
Q 012543 12 KKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSPNPSNYPHFTFCSIQDGLSETE--------------- 76 (461)
Q Consensus 12 ~~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 76 (461)
.++|||+|++.++.||++|+++|+++|+++||+|+++++ .........|+++.+++.......
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~--~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA--EHADRAAAAGLEVVDVAPDYSAVKVFEQVAKDNPRFAET 95 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES--SCHHHHHTTTCEEEESSTTCCHHHHHHHHHHHCHHHHHT
T ss_pred hhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc--chHHHHHhCCCeeEecCCccCHHHHhhhcccCCcccccc
Confidence 356899999999999999999999999999999999998 222222236899999974321000
Q ss_pred ---CCcccHHHHHHHHHHHcchhHHHHHHHHhhcccccCCCCccEEEeCCCchhhHHHHHHcCCCeEEEecccHHHHHHH
Q 012543 77 ---ASTTDFVALISVLHVKCAAPFQDCLAKLLSNAEEKEEEPIACLITDASWFFTHDVAESLKLPRIVLRSLSVSSSLVY 153 (461)
Q Consensus 77 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pDlvi~D~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~ 153 (461)
............+.......+.++.+.+.+ ++||+||+|..++++..+|+.+|||+|.+........
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~~--- 165 (398)
T 3oti_A 96 VATRPAIDLEEWGVQIAAVNRPLVDGTMALVDD-------YRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRTR--- 165 (398)
T ss_dssp GGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHH-------HCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCCT---
T ss_pred ccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH-------cCCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCcc---
Confidence 000001111122223333334444444443 7899999998888899999999999998653310000
Q ss_pred hhhhhhhhcCCCCCCCCCCCcccCCCCCCCCCCCCCccccchhhhHHHHHHHHHHhccCccEEEEcChhHhhHHHHHHHH
Q 012543 154 AALPVLSQKGYFPIQDSHDLEAPVPELPPLRMKDIPVIETLYQETLHQFAAEAINQMKASSGCIWNSVQELEQDSLAKFH 233 (461)
Q Consensus 154 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~ 233 (461)
.. .......+........-.....+..+....+.+..+.
T Consensus 166 ------------------~~------------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 204 (398)
T 3oti_A 166 ------------------GM------------------HRSIASFLTDLMDKHQVSLPEPVATIESFPPSLLLEA----- 204 (398)
T ss_dssp ------------------TH------------------HHHHHTTCHHHHHHTTCCCCCCSEEECSSCGGGGTTS-----
T ss_pred ------------------ch------------------hhHHHHHHHHHHHHcCCCCCCCCeEEEeCCHHHCCCC-----
Confidence 00 0000000111111100001122344444444443210
Q ss_pred hhCCCCccccCcCccCCCCCcCCCccCcchhhhhcCCCCCCeEEEEEccccccC--CHHHHHHHHHHHHhCCCceEEEEC
Q 012543 234 REFPIPSFPIGPFHKYYPASASSLLSQDRICISRLDKQAPKSVIYVSFGSIAAI--DETKFLEVAWGLANSKVPFLWVVR 311 (461)
Q Consensus 234 ~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~--~~~~~~~~~~a~~~~~~~~i~~~~ 311 (461)
.....++.++. . . ....+.+|+...+++++||+++||.... ..+.+..++++++..+.+++|+.+
T Consensus 205 ~~~~~~~~~~~-~--~----------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g 271 (398)
T 3oti_A 205 EPEGWFMRWVP-Y--G----------GGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALG 271 (398)
T ss_dssp CCCSBCCCCCC-C--C----------CCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECT
T ss_pred CCCCCCccccC-C--C----------CCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEEC
Confidence 00011122221 0 0 1122456776556789999999998652 567788899999998899988877
Q ss_pred CCccCCchhcccCchhHHHHhcCCCceeeecChhhhhcCCCCCccccccCchHHHHHhhcCCccccCcccchhhhhH--H
Q 012543 312 PGLVRGAEWIELLPRGFLEMLDGRGHIVKWAPQQEVLAHPATGAFWTHCGWNSTLESMCEGVPMICQPCHGEQMVIA--R 389 (461)
Q Consensus 312 ~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na--~ 389 (461)
+... +.+..+++ |+++.+|+|+.++|+++|+ ||||||.||+.||+++|+|+|++|...||+.|| .
T Consensus 272 ~~~~---~~l~~~~~--------~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~ 338 (398)
T 3oti_A 272 DLDI---SPLGTLPR--------NVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTARE 338 (398)
T ss_dssp TSCC---GGGCSCCT--------TEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHH
T ss_pred CcCh---hhhccCCC--------cEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHH
Confidence 6531 11333444 4489999999999999999 999999999999999999999999999999999 9
Q ss_pred HHHHhhhceeecCC-ccCHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012543 390 YVSDVWKVGLHLER-KLERGEVERAIRRVMVDAEGREMRNRAAILKEKLDLCTKQGSSSYQSLENLISYI 458 (461)
Q Consensus 390 ~v~~~lG~G~~l~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~l 458 (461)
++++ .|+|+.++. +.+++.|. ++++| ++++++++++++++. ...+..+.++.+.+.+
T Consensus 339 ~~~~-~g~g~~~~~~~~~~~~l~----~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 339 AVSR-RGIGLVSTSDKVDADLLR----RLIGD---ESLRTAAREVREEMV----ALPTPAETVRRIVERI 396 (398)
T ss_dssp HHHH-HTSEEECCGGGCCHHHHH----HHHHC---HHHHHHHHHHHHHHH----TSCCHHHHHHHHHHHH
T ss_pred HHHH-CCCEEeeCCCCCCHHHHH----HHHcC---HHHHHHHHHHHHHHH----hCCCHHHHHHHHHHHh
Confidence 9999 599999987 77888776 88999 899999999999998 7788888887776654
No 17
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=9.3e-37 Score=300.42 Aligned_cols=356 Identities=13% Similarity=0.085 Sum_probs=223.2
Q ss_pred ccCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCC---------Cc--CC
Q 012543 10 QQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSPNPSNYPHFTFCSIQDGLSE---------TE--AS 78 (461)
Q Consensus 10 ~~~~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~--~~ 78 (461)
.++.+|||+|++.++.||++|+++|+++|+++||+|++++++.. .......|+++.+++..... .. ..
T Consensus 11 ~~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~-~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (398)
T 4fzr_A 11 PRGSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENM-GPTVTGAGLPFAPTCPSLDMPEVLSWDREGNRTTM 89 (398)
T ss_dssp ----CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGG-HHHHHHTTCCEEEEESSCCHHHHHSBCTTSCBCCC
T ss_pred CCCCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHH-HHHHHhCCCeeEecCCccchHhhhhhhccCccccc
Confidence 34467899999999999999999999999999999999998522 11122357888887632110 00 00
Q ss_pred cccHHH----HHHHHHHHcchhHHHHHHHHhhcccccCCCCccEEEeCCCchhhHHHHHHcCCCeEEEecccHHHHHHHh
Q 012543 79 TTDFVA----LISVLHVKCAAPFQDCLAKLLSNAEEKEEEPIACLITDASWFFTHDVAESLKLPRIVLRSLSVSSSLVYA 154 (461)
Q Consensus 79 ~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pDlvi~D~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~ 154 (461)
..+... ....+.......+.++.+.+.+ ++||+|++|...+++..+|+.+|||+|.+..........
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~-- 160 (398)
T 4fzr_A 90 PREEKPLLEHIGRGYGRLVLRMRDEALALAER-------WKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELI-- 160 (398)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHH--
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh-------CCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhh--
Confidence 001111 1122222222223333333333 789999999877889999999999999876442110000
Q ss_pred hhhhhhhcCCCCCCCCCCCcccCCCCCCCCCCCCCccccchhhhHHHHHHHHHHhc-----cCccEEEEcChhHhhHHHH
Q 012543 155 ALPVLSQKGYFPIQDSHDLEAPVPELPPLRMKDIPVIETLYQETLHQFAAEAINQM-----KASSGCIWNSVQELEQDSL 229 (461)
Q Consensus 155 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~l~~~~~ 229 (461)
.....+.+......+ ...+..+....+.++.+.
T Consensus 161 -----------------------------------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 198 (398)
T 4fzr_A 161 -----------------------------------------KSAGVGELAPELAELGLTDFPDPLLSIDVCPPSMEAQP- 198 (398)
T ss_dssp -----------------------------------------HHHHHHHTHHHHHTTTCSSCCCCSEEEECSCGGGC----
T ss_pred -----------------------------------------hHHHHHHHHHHHHHcCCCCCCCCCeEEEeCChhhCCCC-
Confidence 000011111111111 122445555555555421
Q ss_pred HHHHhhCCCCccccCcCccCCCCCcCCCccCcchhhhhcCCCCCCeEEEEEccccccC--------CHHHHHHHHHHHHh
Q 012543 230 AKFHREFPIPSFPIGPFHKYYPASASSLLSQDRICISRLDKQAPKSVIYVSFGSIAAI--------DETKFLEVAWGLAN 301 (461)
Q Consensus 230 ~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~--------~~~~~~~~~~a~~~ 301 (461)
.....++.++++.. ...++.+|+...+++++||+++||.... ..+.+..++++++.
T Consensus 199 ----~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~ 262 (398)
T 4fzr_A 199 ----KPGTTKMRYVPYNG------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPK 262 (398)
T ss_dssp -----CCCEECCCCCCCC------------SSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGG
T ss_pred ----CCCCCCeeeeCCCC------------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHh
Confidence 00011133332210 1112456665555789999999998652 34568889999998
Q ss_pred CCCceEEEECCCccCCchhcccCchhHHHHhcCCCceeeecChhhhhcCCCCCccccccCchHHHHHhhcCCccccCccc
Q 012543 302 SKVPFLWVVRPGLVRGAEWIELLPRGFLEMLDGRGHIVKWAPQQEVLAHPATGAFWTHCGWNSTLESMCEGVPMICQPCH 381 (461)
Q Consensus 302 ~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~ 381 (461)
.+.+++|+.++.... .+..+ ++|+++.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|..
T Consensus 263 ~~~~~v~~~~~~~~~---~l~~~--------~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~ 329 (398)
T 4fzr_A 263 LGFEVVVAVSDKLAQ---TLQPL--------PEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVI 329 (398)
T ss_dssp GTCEEEECCCC-----------C--------CTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCS
T ss_pred CCCEEEEEeCCcchh---hhccC--------CCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCc
Confidence 888888877654211 12233 345589999999999999999 99999999999999999999999999
Q ss_pred chhhhhHHHHHHhhhceeecCC-ccCHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHH
Q 012543 382 GEQMVIARYVSDVWKVGLHLER-KLERGEVERAIRRVMVDAEGREMRNRAAILKEKLDLCTKQGSSSYQSLENL 454 (461)
Q Consensus 382 ~DQ~~na~~v~~~lG~G~~l~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l 454 (461)
.||+.||.++++ .|+|+.+.. +++++.|.++|.++++| +++++++++.++.+. +..+..+.++.+
T Consensus 330 ~~q~~~a~~~~~-~g~g~~~~~~~~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~l 395 (398)
T 4fzr_A 330 AEVWDSARLLHA-AGAGVEVPWEQAGVESVLAACARIRDD---SSYVGNARRLAAEMA----TLPTPADIVRLI 395 (398)
T ss_dssp GGGHHHHHHHHH-TTSEEECC-------CHHHHHHHHHHC---THHHHHHHHHHHHHT----TSCCHHHHHHHH
T ss_pred hhHHHHHHHHHH-cCCEEecCcccCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHH----cCCCHHHHHHHH
Confidence 999999999999 599999987 78999999999999999 899999999999988 566666555544
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=4.3e-34 Score=280.66 Aligned_cols=356 Identities=14% Similarity=0.145 Sum_probs=235.5
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEc-CCCCC--CC--------c--CCcc
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSPNPSNYPHFTFCSI-QDGLS--ET--------E--ASTT 80 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~--------~--~~~~ 80 (461)
+|||+|++.++.||++|+++|+++|+++||+|++++++.... .....|+++.++ +.... .. . ....
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQA-TAHGAGLTTAGIRGNDRTGDTGGTTQLRFPNPAFGQR 79 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHH-HHHHBTCEEEEC--------------CCSCCGGGGCT
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHH-HHHhCCCceeeecCCccchhhhhhhcccccccccccc
Confidence 479999999999999999999999999999999999752211 112257888887 32110 00 0 0000
Q ss_pred cHHHHHHHHHHHcchh-------HHHHHHHHhhcccccCCCCccEEEeCCCchhhHHHHHHcCCCeEEEecccHHHHHHH
Q 012543 81 DFVALISVLHVKCAAP-------FQDCLAKLLSNAEEKEEEPIACLITDASWFFTHDVAESLKLPRIVLRSLSVSSSLVY 153 (461)
Q Consensus 81 ~~~~~~~~~~~~~~~~-------~~~~~~~l~~~~~~~~~~~pDlvi~D~~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~ 153 (461)
........+....... +.++.+.+.+ ++||+|++|...+++..+|+.+|||+|.+.........
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~~-- 150 (391)
T 3tsa_A 80 DTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA-------WRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPTAG-- 150 (391)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCTTT--
T ss_pred cchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh-------cCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCccccc--
Confidence 0011111111211111 3333333333 78999999987788888999999999997543100000
Q ss_pred hhhhhhhhcCCCCCCCCCCCcccCCCCCCCCCCCCCccccchhhhHHHHHHHHHHhccC-----ccEEEEcChhHhhHHH
Q 012543 154 AALPVLSQKGYFPIQDSHDLEAPVPELPPLRMKDIPVIETLYQETLHQFAAEAINQMKA-----SSGCIWNSVQELEQDS 228 (461)
Q Consensus 154 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~~~~l~~~~ 228 (461)
........+.......+.. .+..+..+.++++.+.
T Consensus 151 ----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (391)
T 3tsa_A 151 ----------------------------------------PFSDRAHELLDPVCRHHGLTGLPTPELILDPCPPSLQASD 190 (391)
T ss_dssp ----------------------------------------HHHHHHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSCTT
T ss_pred ----------------------------------------cccchHHHHHHHHHHHcCCCCCCCCceEEEecChhhcCCC
Confidence 0111122222222222211 1455555555554310
Q ss_pred HHHHHhhCCCCccccCcCccCCCCCcCCCccCcchhhhhcCCCCCCeEEEEEcccccc--CC-HHHHHHHHHHHHhC-CC
Q 012543 229 LAKFHREFPIPSFPIGPFHKYYPASASSLLSQDRICISRLDKQAPKSVIYVSFGSIAA--ID-ETKFLEVAWGLANS-KV 304 (461)
Q Consensus 229 ~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~--~~-~~~~~~~~~a~~~~-~~ 304 (461)
.....++.++ |+. ....+..|+...+++++|++++||... .. .+++..++++ ++. +.
T Consensus 191 -----~~~~~~~~~~-p~~------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~ 251 (391)
T 3tsa_A 191 -----APQGAPVQYV-PYN------------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGV 251 (391)
T ss_dssp -----SCCCEECCCC-CCC------------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTE
T ss_pred -----CCccCCeeee-cCC------------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCe
Confidence 0001113333 110 111245677655678999999999854 23 6778888888 877 77
Q ss_pred ceEEEECCCccCCchhcccCchhHHHHhcCCCceeeecChhhhhcCCCCCccccccCchHHHHHhhcCCccccCcccchh
Q 012543 305 PFLWVVRPGLVRGAEWIELLPRGFLEMLDGRGHIVKWAPQQEVLAHPATGAFWTHCGWNSTLESMCEGVPMICQPCHGEQ 384 (461)
Q Consensus 305 ~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ 384 (461)
+++|+.++... +.+..++ .|+++.+|+|+.++|++||+ ||||||.||+.||+++|+|+|++|...||
T Consensus 252 ~~v~~~~~~~~---~~l~~~~--------~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q 318 (391)
T 3tsa_A 252 EAVIAVPPEHR---ALLTDLP--------DNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYFDQ 318 (391)
T ss_dssp EEEEECCGGGG---GGCTTCC--------TTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSTTH
T ss_pred EEEEEECCcch---hhcccCC--------CCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCcccH
Confidence 87777665321 1122233 45588999999999999999 99999999999999999999999999999
Q ss_pred hhhHHHHHHhhhceeecCC---ccCHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHH
Q 012543 385 MVIARYVSDVWKVGLHLER---KLERGEVERAIRRVMVDAEGREMRNRAAILKEKLDLCTKQGSSSYQSLENLISYIL 459 (461)
Q Consensus 385 ~~na~~v~~~lG~G~~l~~---~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~l~ 459 (461)
+.|+.++++ .|+|..+.. ..+++.|.++|.++++| ++++++++++++.+. +..+..++++.+.+.+.
T Consensus 319 ~~~a~~~~~-~g~g~~~~~~~~~~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 319 FDYARNLAA-AGAGICLPDEQAQSDHEQFTDSIATVLGD---TGFAAAAIKLSDEIT----AMPHPAALVRTLENTAA 388 (391)
T ss_dssp HHHHHHHHH-TTSEEECCSHHHHTCHHHHHHHHHHHHTC---THHHHHHHHHHHHHH----TSCCHHHHHHHHHHC--
T ss_pred HHHHHHHHH-cCCEEecCcccccCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH----cCCCHHHHHHHHHHHHh
Confidence 999999999 599999874 37899999999999999 899999999999988 77888888887776543
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=9.1e-33 Score=273.10 Aligned_cols=364 Identities=15% Similarity=0.141 Sum_probs=243.5
Q ss_pred cccccCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCC------------CC
Q 012543 7 SHMQQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSPNPSNYPHFTFCSIQDGL------------SE 74 (461)
Q Consensus 7 ~~m~~~~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~ 74 (461)
++-.++++|||++++.++.||++|+++|+++|+++||+|++++++. ........|+++..++... ..
T Consensus 13 ~~~~~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 91 (412)
T 3otg_A 13 SGHIEGRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEG-FAGTLRKLGFEPVATGMPVFDGFLAALRIRFDT 91 (412)
T ss_dssp -----CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGG-GHHHHHHTTCEEEECCCCHHHHHHHHHHHHHSC
T ss_pred cCCcccceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHH-HHHHHHhcCCceeecCcccccchhhhhhhhhcc
Confidence 3444567899999999999999999999999999999999999852 2211223588999887410 00
Q ss_pred CcCCcccHHHH----HHHHHHH-cchhHHHHHHHHhhcccccCCCCccEEEeCCCchhhHHHHHHcCCCeEEEecccHHH
Q 012543 75 TEASTTDFVAL----ISVLHVK-CAAPFQDCLAKLLSNAEEKEEEPIACLITDASWFFTHDVAESLKLPRIVLRSLSVSS 149 (461)
Q Consensus 75 ~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~pDlvi~D~~~~~a~~~A~~lgiP~v~~~~~~~~~ 149 (461)
........... ...+... ....+....+.+.+ ++||+|++|...+++..+|+.+|||+|.+.......
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~ 164 (412)
T 3otg_A 92 DSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIER-------LRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTP 164 (412)
T ss_dssp SCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHH-------HCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCC
T ss_pred cCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHh-------cCCCEEEECchhhHHHHHHHHcCCCEEEecccccCc
Confidence 00000011111 1111111 11112223333333 789999999877878889999999999865431100
Q ss_pred HHHHhhhhhhhhcCCCCCCCCCCCcccCCCCCCCCCCCCCccccchhhhHHHHHHHHHHh----------ccCccEEEEc
Q 012543 150 SLVYAALPVLSQKGYFPIQDSHDLEAPVPELPPLRMKDIPVIETLYQETLHQFAAEAINQ----------MKASSGCIWN 219 (461)
Q Consensus 150 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~ 219 (461)
. .....+.+.+..+... ....+.++..
T Consensus 165 ~-------------------------------------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~ 201 (412)
T 3otg_A 165 D-------------------------------------------DLTRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDI 201 (412)
T ss_dssp S-------------------------------------------HHHHHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEEC
T ss_pred h-------------------------------------------hhhHHHHHHHHHHHHHcCCCCCcccccCCCCeEEee
Confidence 0 0011111111111111 1234556666
Q ss_pred ChhHhhHHHHHHHHhhCCC---CccccCcCccCCCCCcCCCccCcchhhhh-cCCCCCCeEEEEEccccccCCHHHHHHH
Q 012543 220 SVQELEQDSLAKFHREFPI---PSFPIGPFHKYYPASASSLLSQDRICISR-LDKQAPKSVIYVSFGSIAAIDETKFLEV 295 (461)
Q Consensus 220 ~~~~l~~~~~~~~~~~~~~---~~~~vG~~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~~v~vs~Gs~~~~~~~~~~~~ 295 (461)
+.+.++... ..+.. ++.++++- ......+| ....+++++|++++||......+.+..+
T Consensus 202 ~~~~~~~~~-----~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~ 263 (412)
T 3otg_A 202 FPPSLQEPE-----FRARPRRHELRPVPFA-------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAA 263 (412)
T ss_dssp SCGGGSCHH-----HHTCTTEEECCCCCCC-------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHH
T ss_pred CCHHhcCCc-----ccCCCCcceeeccCCC-------------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHH
Confidence 666665321 11111 12222211 01113455 2223468899999999976667888889
Q ss_pred HHHHHhCCCceEEEECCCccCCchhcccCchhHHHHhcCCCceeeecChhhhhcCCCCCccccccCchHHHHHhhcCCcc
Q 012543 296 AWGLANSKVPFLWVVRPGLVRGAEWIELLPRGFLEMLDGRGHIVKWAPQQEVLAHPATGAFWTHCGWNSTLESMCEGVPM 375 (461)
Q Consensus 296 ~~a~~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~ 375 (461)
+++++..+.+++|+.+.+... +.+..+++ |+.+.+|+|+.++|+++|+ ||+|||.||++||+++|+|+
T Consensus 264 ~~~l~~~~~~~~~~~g~~~~~--~~l~~~~~--------~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~ 331 (412)
T 3otg_A 264 IDGLAGLDADVLVASGPSLDV--SGLGEVPA--------NVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQ 331 (412)
T ss_dssp HHHHHTSSSEEEEECCSSCCC--TTCCCCCT--------TEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCE
T ss_pred HHHHHcCCCEEEEEECCCCCh--hhhccCCC--------cEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCE
Confidence 999998888888887765311 11233444 4588999999999999999 99999999999999999999
Q ss_pred ccCcccchhhhhHHHHHHhhhceeecCC-ccCHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHH
Q 012543 376 ICQPCHGEQMVIARYVSDVWKVGLHLER-KLERGEVERAIRRVMVDAEGREMRNRAAILKEKLDLCTKQGSSSYQSLENL 454 (461)
Q Consensus 376 l~~P~~~DQ~~na~~v~~~lG~G~~l~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l 454 (461)
|++|...||..|+..+++ .|+|..+.. +.++++|.++|.++++| +.+++++.+.+.++. +..+.++.++.+
T Consensus 332 v~~p~~~~q~~~~~~v~~-~g~g~~~~~~~~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 403 (412)
T 3otg_A 332 LSFPWAGDSFANAQAVAQ-AGAGDHLLPDNISPDSVSGAAKRLLAE---ESYRAGARAVAAEIA----AMPGPDEVVRLL 403 (412)
T ss_dssp EECCCSTTHHHHHHHHHH-HTSEEECCGGGCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----HSCCHHHHHTTH
T ss_pred EecCCchhHHHHHHHHHH-cCCEEecCcccCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHh----cCCCHHHHHHHH
Confidence 999999999999999999 599999987 78999999999999999 899999999998887 667888888888
Q ss_pred HHHHH
Q 012543 455 ISYIL 459 (461)
Q Consensus 455 ~~~l~ 459 (461)
.+.+.
T Consensus 404 ~~l~~ 408 (412)
T 3otg_A 404 PGFAS 408 (412)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 77664
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=2.9e-29 Score=243.25 Aligned_cols=306 Identities=13% Similarity=0.100 Sum_probs=190.8
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCC-CCCCCCCceEEEcCC-CCCCCc--CCcccHHHHHHHHH
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSP-NPSNYPHFTFCSIQD-GLSETE--ASTTDFVALISVLH 90 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~ 90 (461)
.||+|.+.|+.||++|+++||++|+++||+|+|+++....+ ......|+++..++- +++... .....+..++..
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-- 80 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLELLKS-- 80 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGGTCCEEECC--------------CHHHHHHH--
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhcCCcEEEEECCCcCCCCHHHHHHHHHHHHHH--
Confidence 58999998888999999999999999999999999864332 123346788888873 322111 011111111111
Q ss_pred HHcchhHHHHHHHHhhcccccCCCCccEEEeCCCch--hhHHHHHHcCCCeEEEecccHHHHHHHhhhhhhhhcCCCCCC
Q 012543 91 VKCAAPFQDCLAKLLSNAEEKEEEPIACLITDASWF--FTHDVAESLKLPRIVLRSLSVSSSLVYAALPVLSQKGYFPIQ 168 (461)
Q Consensus 91 ~~~~~~~~~~~~~l~~~~~~~~~~~pDlvi~D~~~~--~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 168 (461)
+.+..+.+.+ ++||+||++..+. .+..+|+.+|||+|+.-.
T Consensus 81 ------~~~~~~~l~~-------~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~------------------------ 123 (365)
T 3s2u_A 81 ------LFQALRVIRQ-------LRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQ------------------------ 123 (365)
T ss_dssp ------HHHHHHHHHH-------HCCSEEEECSSSTHHHHHHHHHHTTCCEEEEEC------------------------
T ss_pred ------HHHHHHHHHh-------cCCCEEEEcCCcchHHHHHHHHHcCCCEEEEec------------------------
Confidence 1222223333 7899999997653 456789999999997421
Q ss_pred CCCCCcccCCCCCCCCCCCCCccccchhhhHHHHHHHHHHhccCccEEEEcChhHhhHHHHHHHHhhCCCCccccCcCcc
Q 012543 169 DSHDLEAPVPELPPLRMKDIPVIETLYQETLHQFAAEAINQMKASSGCIWNSVQELEQDSLAKFHREFPIPSFPIGPFHK 248 (461)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~vG~~~~ 248 (461)
+.++++ . .+ + ..+.++.++.. +++..+ ...+..++|....
T Consensus 124 ------n~~~G~--------------~----nr----~--l~~~a~~v~~~-~~~~~~---------~~~k~~~~g~pvr 163 (365)
T 3s2u_A 124 ------NAVAGT--------------A----NR----S--LAPIARRVCEA-FPDTFP---------ASDKRLTTGNPVR 163 (365)
T ss_dssp ------SSSCCH--------------H----HH----H--HGGGCSEEEES-STTSSC---------C---CEECCCCCC
T ss_pred ------chhhhh--------------H----HH----h--hccccceeeec-cccccc---------CcCcEEEECCCCc
Confidence 111110 0 00 0 01223444432 222211 0223666775543
Q ss_pred CCCCCcCCCccCcchhhhhcCCCCCCeEEEEEccccccCCHHHHHHHHHHHHhCC----CceEEEECCCccCCchhcccC
Q 012543 249 YYPASASSLLSQDRICISRLDKQAPKSVIYVSFGSIAAIDETKFLEVAWGLANSK----VPFLWVVRPGLVRGAEWIELL 324 (461)
Q Consensus 249 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~----~~~i~~~~~~~~~~~~~~~~l 324 (461)
.... .+ ...+....+.++.|++..||.... ...+.+.++++... ..++++++.+. .+.+
T Consensus 164 ~~~~-------~~--~~~~~~~~~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi~~~G~~~------~~~~ 226 (365)
T 3s2u_A 164 GELF-------LD--AHARAPLTGRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIRHQAGRQH------AEIT 226 (365)
T ss_dssp GGGC-------CC--TTSSCCCTTSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEEEECCTTT------HHHH
T ss_pred hhhc-------cc--hhhhcccCCCCcEEEEECCcCCcc--ccchhhHHHHHhcccccceEEEEecCccc------cccc
Confidence 3221 01 011112234678899999997752 33345566666543 34555554432 1112
Q ss_pred chhHHHHhcCCCceeeecChh-hhhcCCCCCccccccCchHHHHHhhcCCccccCccc----chhhhhHHHHHHhhhcee
Q 012543 325 PRGFLEMLDGRGHIVKWAPQQ-EVLAHPATGAFWTHCGWNSTLESMCEGVPMICQPCH----GEQMVIARYVSDVWKVGL 399 (461)
Q Consensus 325 p~~~~~~~~~~~~~~~~vp~~-~lL~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~----~DQ~~na~~v~~~lG~G~ 399 (461)
.+.+ ...+.++.+.+|+++. ++|..+|+ +|||+|.+|+.|++++|+|+|++|.. .+|..||+.+++ .|+|+
T Consensus 227 ~~~~-~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~-~G~a~ 302 (365)
T 3s2u_A 227 AERY-RTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVR-SGAGR 302 (365)
T ss_dssp HHHH-HHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHT-TTSEE
T ss_pred ccee-cccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHH-CCCEE
Confidence 2222 2345677888999985 59999999 99999999999999999999999973 589999999999 49999
Q ss_pred ecCC-ccCHHHHHHHHHHHhcc
Q 012543 400 HLER-KLERGEVERAIRRVMVD 420 (461)
Q Consensus 400 ~l~~-~~~~~~l~~~i~~ll~~ 420 (461)
.+.. +++++.|.++|.++++|
T Consensus 303 ~l~~~~~~~~~L~~~i~~ll~d 324 (365)
T 3s2u_A 303 LLPQKSTGAAELAAQLSEVLMH 324 (365)
T ss_dssp ECCTTTCCHHHHHHHHHHHHHC
T ss_pred EeecCCCCHHHHHHHHHHHHCC
Confidence 9987 88999999999999999
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.94 E-value=6.7e-27 Score=201.66 Aligned_cols=157 Identities=20% Similarity=0.322 Sum_probs=132.9
Q ss_pred chhhhhcCCCCCCeEEEEEcccccc-CCHHHHHHHHHHHHhCCCceEEEECCCccCCchhcccCchhHHHHhcCCCceee
Q 012543 262 RICISRLDKQAPKSVIYVSFGSIAA-IDETKFLEVAWGLANSKVPFLWVVRPGLVRGAEWIELLPRGFLEMLDGRGHIVK 340 (461)
Q Consensus 262 ~~l~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~ 340 (461)
+++.+|++..+++++||+++||... ...+.+..++++++..+.+++|+.++.. ...++ .|+.+.+
T Consensus 9 ~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~------~~~~~--------~~v~~~~ 74 (170)
T 2o6l_A 9 KEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK------PDTLG--------LNTRLYK 74 (170)
T ss_dssp HHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC------CTTCC--------TTEEEES
T ss_pred HHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC------cccCC--------CcEEEec
Confidence 4599999876667899999999864 5667888899999988889988886542 12233 3458999
Q ss_pred ecChhhhh--cCCCCCccccccCchHHHHHhhcCCccccCcccchhhhhHHHHHHhhhceeecCC-ccCHHHHHHHHHHH
Q 012543 341 WAPQQEVL--AHPATGAFWTHCGWNSTLESMCEGVPMICQPCHGEQMVIARYVSDVWKVGLHLER-KLERGEVERAIRRV 417 (461)
Q Consensus 341 ~vp~~~lL--~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~l~~-~~~~~~l~~~i~~l 417 (461)
|+|+.+++ +.+++ ||||||+||++||+++|+|+|++|...||..||+++++ .|+|+.++. .++.++|.++|.++
T Consensus 75 ~~~~~~~l~~~~ad~--~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~~~~~~~~~l~~~i~~l 151 (170)
T 2o6l_A 75 WIPQNDLLGHPKTRA--FITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVDFNTMSSTDLLNALKRV 151 (170)
T ss_dssp SCCHHHHHTSTTEEE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECCTTTCCHHHHHHHHHHH
T ss_pred CCCHHHHhcCCCcCE--EEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEeccccCCHHHHHHHHHHH
Confidence 99999999 55665 99999999999999999999999999999999999999 599999987 78999999999999
Q ss_pred hcchhHHHHHHHHHHHHHHHH
Q 012543 418 MVDAEGREMRNRAAILKEKLD 438 (461)
Q Consensus 418 l~~~~~~~~~~~a~~l~~~~~ 438 (461)
++| ++|+++++++++.++
T Consensus 152 l~~---~~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 152 IND---PSYKENVMKLSRIQH 169 (170)
T ss_dssp HHC---HHHHHHHHHHC----
T ss_pred HcC---HHHHHHHHHHHHHhh
Confidence 999 899999999999876
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.88 E-value=6.9e-21 Score=184.57 Aligned_cols=340 Identities=15% Similarity=0.095 Sum_probs=205.7
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCC-CCCCCCCceEEEcCC-CCCCCcCCcccHHHHHHHHHH
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSP-NPSNYPHFTFCSIQD-GLSETEASTTDFVALISVLHV 91 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 91 (461)
+|||++++.+..||..+++.|+++|+++||+|++++...... ......|+++..++. .+.. ......+.....
T Consensus 6 ~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----~~~~~~~~~~~~ 80 (364)
T 1f0k_A 6 GKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRG-----KGIKALIAAPLR 80 (364)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGTCEEEECCCCCCTT-----CCHHHHHTCHHH
T ss_pred CcEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccccCCceEEecCCccCc-----CccHHHHHHHHH
Confidence 379999998888999999999999999999999999853211 111224777777753 2211 111111100000
Q ss_pred HcchhHHHHHHHHhhcccccCCCCccEEEeCCCc--hhhHHHHHHcCCCeEEEecccHHHHHHHhhhhhhhhcCCCCCCC
Q 012543 92 KCAAPFQDCLAKLLSNAEEKEEEPIACLITDASW--FFTHDVAESLKLPRIVLRSLSVSSSLVYAALPVLSQKGYFPIQD 169 (461)
Q Consensus 92 ~~~~~~~~~~~~l~~~~~~~~~~~pDlvi~D~~~--~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 169 (461)
.. ..+....+.+.+ .+||+|+++... ..+..+++.+++|+|....... +
T Consensus 81 ~~-~~~~~l~~~l~~-------~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~------------------~--- 131 (364)
T 1f0k_A 81 IF-NAWRQARAIMKA-------YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGI------------------A--- 131 (364)
T ss_dssp HH-HHHHHHHHHHHH-------HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSS------------------C---
T ss_pred HH-HHHHHHHHHHHh-------cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCC------------------C---
Confidence 00 112222223333 679999998643 3456788899999986432200 0
Q ss_pred CCCCcccCCCCCCCCCCCCCccccchhhhHHHHHHHHHHhccCccEEEEcChhHhhHHHHHHHHhhCCCCccccCcCccC
Q 012543 170 SHDLEAPVPELPPLRMKDIPVIETLYQETLHQFAAEAINQMKASSGCIWNSVQELEQDSLAKFHREFPIPSFPIGPFHKY 249 (461)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~vG~~~~~ 249 (461)
.. ..+ .....++.++..+... ++ ++..+|.....
T Consensus 132 ------------------------~~---~~~------~~~~~~d~v~~~~~~~------------~~-~~~~i~n~v~~ 165 (364)
T 1f0k_A 132 ------------------------GL---TNK------WLAKIATKVMQAFPGA------------FP-NAEVVGNPVRT 165 (364)
T ss_dssp ------------------------CH---HHH------HHTTTCSEEEESSTTS------------SS-SCEECCCCCCH
T ss_pred ------------------------cH---HHH------HHHHhCCEEEecChhh------------cC-CceEeCCccch
Confidence 00 000 1123455555544221 12 34455533211
Q ss_pred CCCCcCCCccCcchhhhhcCCCCCCeEEEEEccccccCCHHHHHHHHHHHHhC--CCceEEEECCCccCCchhcccCchh
Q 012543 250 YPASASSLLSQDRICISRLDKQAPKSVIYVSFGSIAAIDETKFLEVAWGLANS--KVPFLWVVRPGLVRGAEWIELLPRG 327 (461)
Q Consensus 250 ~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~--~~~~i~~~~~~~~~~~~~~~~lp~~ 327 (461)
.. ..... ..+.+...+++++|+++.|+... ......++++++.. +.+++++++.+. ...+.+.
T Consensus 166 ~~------~~~~~-~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~------~~~l~~~ 230 (364)
T 1f0k_A 166 DV------LALPL-PQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGS------QQSVEQA 230 (364)
T ss_dssp HH------HTSCC-HHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTC------HHHHHHH
T ss_pred hh------cccch-hhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCch------HHHHHHH
Confidence 11 00000 11122222356778888888753 34455566666654 345556555542 1112221
Q ss_pred HHHHhc-CCCceeeecCh-hhhhcCCCCCccccccCchHHHHHhhcCCccccCccc---chhhhhHHHHHHhhhceeecC
Q 012543 328 FLEMLD-GRGHIVKWAPQ-QEVLAHPATGAFWTHCGWNSTLESMCEGVPMICQPCH---GEQMVIARYVSDVWKVGLHLE 402 (461)
Q Consensus 328 ~~~~~~-~~~~~~~~vp~-~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~---~DQ~~na~~v~~~lG~G~~l~ 402 (461)
+. ..+ +|+.+.+|+++ ..++..+|+ +|+++|.+++.||+++|+|+|+.|.. .||..|++.+.+. |.|..++
T Consensus 231 ~~-~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~-g~g~~~~ 306 (364)
T 1f0k_A 231 YA-EAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-GAAKIIE 306 (364)
T ss_dssp HH-HTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-TSEEECC
T ss_pred Hh-hcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhC-CcEEEec
Confidence 21 122 47788899954 669999999 99999999999999999999999987 7999999999985 9999887
Q ss_pred C-ccCHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHcC
Q 012543 403 R-KLERGEVERAIRRVMVDAEGREMRNRAAILKEKLDLCTKQGSSSYQSLENLISYILSY 461 (461)
Q Consensus 403 ~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~l~~~ 461 (461)
. +.+.+++.++|.++ | +..+++..+-+.+.. +..+.++.++.+.+.++++
T Consensus 307 ~~d~~~~~la~~i~~l--~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~y~~~ 357 (364)
T 1f0k_A 307 QPQLSVDAVANTLAGW--S---RETLLTMAERARAAS----IPDATERVANEVSRVARAL 357 (364)
T ss_dssp GGGCCHHHHHHHHHTC--C---HHHHHHHHHHHHHTC----CTTHHHHHHHHHHHHHTTC
T ss_pred cccCCHHHHHHHHHhc--C---HHHHHHHHHHHHHhh----ccCHHHHHHHHHHHHHHHH
Confidence 7 67799999999999 6 455544433333332 4567778888888877653
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.62 E-value=1.4e-14 Score=133.26 Aligned_cols=116 Identities=8% Similarity=0.017 Sum_probs=89.1
Q ss_pred CCeEEEEEccccccCCHHHHHHHHHHHHhCCCceEEEECCCccCCchhcccCchhHHHHh--cCCCceeeecChhh-hhc
Q 012543 273 PKSVIYVSFGSIAAIDETKFLEVAWGLANSKVPFLWVVRPGLVRGAEWIELLPRGFLEML--DGRGHIVKWAPQQE-VLA 349 (461)
Q Consensus 273 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~--~~~~~~~~~vp~~~-lL~ 349 (461)
..+.|+|++|.... ......+++++.... ++.++.+.+.. ..+.+.+.. ..|+.+..|++++. +|.
T Consensus 156 ~~~~ILv~~GG~d~--~~l~~~vl~~L~~~~-~i~vv~G~~~~--------~~~~l~~~~~~~~~v~v~~~~~~m~~~m~ 224 (282)
T 3hbm_A 156 KKYDFFICMGGTDI--KNLSLQIASELPKTK-IISIATSSSNP--------NLKKLQKFAKLHNNIRLFIDHENIAKLMN 224 (282)
T ss_dssp CCEEEEEECCSCCT--TCHHHHHHHHSCTTS-CEEEEECTTCT--------THHHHHHHHHTCSSEEEEESCSCHHHHHH
T ss_pred cCCeEEEEECCCch--hhHHHHHHHHhhcCC-CEEEEECCCch--------HHHHHHHHHhhCCCEEEEeCHHHHHHHHH
Confidence 46789999998653 345667788887654 56566555421 122222221 24778889999865 999
Q ss_pred CCCCCccccccCchHHHHHhhcCCccccCcccchhhhhHHHHHHhhhceeecCC
Q 012543 350 HPATGAFWTHCGWNSTLESMCEGVPMICQPCHGEQMVIARYVSDVWKVGLHLER 403 (461)
Q Consensus 350 ~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~l~~ 403 (461)
.+|+ +|++|| +|+.|+++.|+|+|++|...+|..||+.+++ .|++..+..
T Consensus 225 ~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~-~G~~~~~~~ 274 (282)
T 3hbm_A 225 ESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAK-KGYEVEYKY 274 (282)
T ss_dssp TEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHH-TTCEEECGG
T ss_pred HCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHH-CCCEEEcch
Confidence 9999 999999 8999999999999999999999999999999 599998865
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.61 E-value=8.5e-16 Score=135.64 Aligned_cols=139 Identities=12% Similarity=0.045 Sum_probs=94.6
Q ss_pred CCCeEEEEEccccccCCHHHHHHH-----HHHHHhCC-CceEEEECCCccCC-chhccc---------CchhH-------
Q 012543 272 APKSVIYVSFGSIAAIDETKFLEV-----AWGLANSK-VPFLWVVRPGLVRG-AEWIEL---------LPRGF------- 328 (461)
Q Consensus 272 ~~~~~v~vs~Gs~~~~~~~~~~~~-----~~a~~~~~-~~~i~~~~~~~~~~-~~~~~~---------lp~~~------- 328 (461)
.++++|||+.||... -.+.+..+ ++++...+ .+++++++...... .+.... +|.+.
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~ 104 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPIDQFGCGDTA 104 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCCCSHHHHHTCEECSCCCSSCTTCTTCSC
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhHHHHHHhhhccccccccccccccccccc
Confidence 457899999999742 23333433 47887777 67777777653200 000000 11000
Q ss_pred H----HHhcCCCceeeecChh-hhhc-CCCCCccccccCchHHHHHhhcCCccccCccc----chhhhhHHHHHHhhhce
Q 012543 329 L----EMLDGRGHIVKWAPQQ-EVLA-HPATGAFWTHCGWNSTLESMCEGVPMICQPCH----GEQMVIARYVSDVWKVG 398 (461)
Q Consensus 329 ~----~~~~~~~~~~~~vp~~-~lL~-~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~----~DQ~~na~~v~~~lG~G 398 (461)
. ....-++.+.+|++++ ++|+ .+|+ +|||||+||++|++++|+|+|++|.. .||..||+++++ .|++
T Consensus 105 ~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~-~G~~ 181 (224)
T 2jzc_A 105 RQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVE-LGYV 181 (224)
T ss_dssp EEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHH-HSCC
T ss_pred cccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHH-CCCE
Confidence 0 0000123455888875 6999 9999 99999999999999999999999974 479999999999 5998
Q ss_pred eecCCccCHHHHHHHHHHHh
Q 012543 399 LHLERKLERGEVERAIRRVM 418 (461)
Q Consensus 399 ~~l~~~~~~~~l~~~i~~ll 418 (461)
+.+ +.+.|.++|.++.
T Consensus 182 ~~~----~~~~L~~~i~~l~ 197 (224)
T 2jzc_A 182 WSC----APTETGLIAGLRA 197 (224)
T ss_dssp CEE----CSCTTTHHHHHHH
T ss_pred EEc----CHHHHHHHHHHHH
Confidence 765 5677777777773
No 25
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.46 E-value=2.7e-11 Score=119.65 Aligned_cols=382 Identities=14% Similarity=0.065 Sum_probs=193.2
Q ss_pred CCCeEEEEcCC-----CccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCC-------------------CCCCceEEEc
Q 012543 13 KGRRLILFPLP-----FQGHINPMLQLANILYSKGFSITIIHTKFNSPNPS-------------------NYPHFTFCSI 68 (461)
Q Consensus 13 ~~~~il~~~~~-----~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~~~~~-------------------~~~~~~~~~~ 68 (461)
|+|||++++.. ..|--.-+..|++.|+++||+|+++++........ ...|+++..+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 57899998742 34555568899999999999999999753322110 2246666666
Q ss_pred CCCCCCCcCCcccHHHH-HHHHHHHcchhHHHHHHHHhhcccccCCCCccEEEeCCCc--hhhHHHHHHcCCCeEEEecc
Q 012543 69 QDGLSETEASTTDFVAL-ISVLHVKCAAPFQDCLAKLLSNAEEKEEEPIACLITDASW--FFTHDVAESLKLPRIVLRSL 145 (461)
Q Consensus 69 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pDlvi~D~~~--~~a~~~A~~lgiP~v~~~~~ 145 (461)
+................ ...+.... ..+...+..+... . .+||+|.+.... ..+..++...++|+|.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~----~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~ 154 (439)
T 3fro_A 81 GGGLLDSEDVYGPGWDGLIRKAVTFG-RASVLLLNDLLRE-E----PLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHR 154 (439)
T ss_dssp ESGGGGCSSTTCSHHHHHHHHHHHHH-HHHHHHHHHHTTT-S----CCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESC
T ss_pred cchhccccccccCCcchhhhhhHHHH-HHHHHHHHHHhcc-C----CCCeEEEecchhhhhhHHHHhhccCCCEEEEecc
Confidence 53111110111101111 22221111 1222333333211 1 789999998543 23455678889999886544
Q ss_pred cHHHHHHHhhhhhh-hhcCCCCCCCCCCCcccCCCCCCCCCCCCCccccchhhhHHHHHHHHHHhccCccEEEEcChhHh
Q 012543 146 SVSSSLVYAALPVL-SQKGYFPIQDSHDLEAPVPELPPLRMKDIPVIETLYQETLHQFAAEAINQMKASSGCIWNSVQEL 224 (461)
Q Consensus 146 ~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 224 (461)
..... .+.. ... ..+.... . .....+ .......++.++..|....
T Consensus 155 ~~~~~-----~~~~~~~~---------------~~~~~~~--~------~~~~~~------~~~~~~~ad~ii~~S~~~~ 200 (439)
T 3fro_A 155 LNKSK-----LPAFYFHE---------------AGLSELA--P------YPDIDP------EHTGGYIADIVTTVSRGYL 200 (439)
T ss_dssp CCCCC-----EEHHHHHH---------------TTCGGGC--C------SSEECH------HHHHHHHCSEEEESCHHHH
T ss_pred ccccc-----CchHHhCc---------------ccccccc--c------cceeeH------hhhhhhhccEEEecCHHHH
Confidence 21000 0000 000 0000000 0 000001 1222346778888776655
Q ss_pred hHHHHHHHHhhCCCCccccCcCccCCCCCcCCCcc-----CcchhhhhcCCCCCCeEEEEEccccc-c-CCHHHHHHHHH
Q 012543 225 EQDSLAKFHREFPIPSFPIGPFHKYYPASASSLLS-----QDRICISRLDKQAPKSVIYVSFGSIA-A-IDETKFLEVAW 297 (461)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~-----~~~~l~~~l~~~~~~~~v~vs~Gs~~-~-~~~~~~~~~~~ 297 (461)
+. .....+. ...++..+..-.....- .....+ ....+.+.++- +++ .+++..|+.. . ...+.+...+.
T Consensus 201 ~~-~~~~~~~-~~~~i~vi~ngvd~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~-~~i~~~G~~~~~~Kg~~~li~a~~ 275 (439)
T 3fro_A 201 ID-EWGFFRN-FEGKITYVFNGIDCSFW-NESYLTGSRDERKKSLLSKFGM-DEG-VTFMFIGRFDRGQKGVDVLLKAIE 275 (439)
T ss_dssp HH-THHHHGG-GTTSEEECCCCCCTTTS-CGGGSCSCHHHHHHHHHHHHTC-CSC-EEEEEECCSSCTTBCHHHHHHHHH
T ss_pred HH-Hhhhhhh-cCCceeecCCCCCchhc-CcccccchhhhhHHHHHHHcCC-CCC-cEEEEEcccccccccHHHHHHHHH
Confidence 43 1111100 12333333322211110 000000 11223333333 234 7788888876 4 34444444444
Q ss_pred HHHh----CCCceEEEECCCccCCchhcccCchhHHHHhcCCCceeeecChhh---hhcCCCCCccccc----cCchHHH
Q 012543 298 GLAN----SKVPFLWVVRPGLVRGAEWIELLPRGFLEMLDGRGHIVKWAPQQE---VLAHPATGAFWTH----CGWNSTL 366 (461)
Q Consensus 298 a~~~----~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~~---lL~~~~~~~~I~H----GG~gs~~ 366 (461)
.+.. .+.++++ ++.+.... ...+ ....+..++++.+.+|+|+.+ ++..+|+ +|.- |--.++.
T Consensus 276 ~l~~~~~~~~~~l~i-~G~g~~~~---~~~l-~~~~~~~~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~ 348 (439)
T 3fro_A 276 ILSSKKEFQEMRFII-IGKGDPEL---EGWA-RSLEEKHGNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVAL 348 (439)
T ss_dssp HHHTSGGGGGEEEEE-ECCCCHHH---HHHH-HHHHHHCTTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHH
T ss_pred HHHhcccCCCeEEEE-EcCCChhH---HHHH-HHHHhhcCCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHH
Confidence 4444 2334433 33332000 0111 111122233334568899865 6888998 6632 4457999
Q ss_pred HHhhcCCccccCcccchhhhhHHHHHHhhhceeecCCccCHHHHHHHHHHHhc-chh-HHHHHHHHHHHHHHHHHHhhcC
Q 012543 367 ESMCEGVPMICQPCHGEQMVIARYVSDVWKVGLHLERKLERGEVERAIRRVMV-DAE-GREMRNRAAILKEKLDLCTKQG 444 (461)
Q Consensus 367 eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~l~~~i~~ll~-~~~-~~~~~~~a~~l~~~~~~~~~~~ 444 (461)
||+++|+|+|+... ......++. |.|..++. -+.+++.++|.++++ |++ ...+.+++++..+.
T Consensus 349 EAma~G~Pvi~s~~----~~~~e~~~~--~~g~~~~~-~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~-------- 413 (439)
T 3fro_A 349 EAMCLGAIPIASAV----GGLRDIITN--ETGILVKA-GDPGELANAILKALELSRSDLSKFRENCKKRAMS-------- 413 (439)
T ss_dssp HHHHTTCEEEEESS----THHHHHCCT--TTCEEECT-TCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHT--------
T ss_pred HHHHCCCCeEEcCC----CCcceeEEc--CceEEeCC-CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhh--------
Confidence 99999999998743 344455543 67877765 589999999999998 633 34555555554433
Q ss_pred CChHHHHHHHHHHHHcC
Q 012543 445 SSSYQSLENLISYILSY 461 (461)
Q Consensus 445 g~~~~~~~~l~~~l~~~ 461 (461)
-+.+..++.+.+.++++
T Consensus 414 ~s~~~~~~~~~~~~~~~ 430 (439)
T 3fro_A 414 FSWEKSAERYVKAYTGS 430 (439)
T ss_dssp SCHHHHHHHHHHHHHTC
T ss_pred CcHHHHHHHHHHHHHHH
Confidence 45788888888877653
No 26
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.43 E-value=7.9e-11 Score=116.53 Aligned_cols=368 Identities=11% Similarity=0.033 Sum_probs=186.0
Q ss_pred CCCeEEEEcC-----------CCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCC---CCCCCceEEEcCCCCCCCcCC
Q 012543 13 KGRRLILFPL-----------PFQGHINPMLQLANILYSKGFSITIIHTKFNSPNP---SNYPHFTFCSIQDGLSETEAS 78 (461)
Q Consensus 13 ~~~~il~~~~-----------~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 78 (461)
++|||++++. ...|+-..+..|++.|.++||+|++++........ ....+++++.++....... .
T Consensus 19 ~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~-~ 97 (438)
T 3c48_A 19 SHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGL-S 97 (438)
T ss_dssp CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEEETTEEEEEECCSCSSSC-C
T ss_pred chheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccccccCCeEEEEecCCCcccc-c
Confidence 4679999885 23678889999999999999999999875321110 1125677777763211110 0
Q ss_pred cccHHHHHHHHHHHcchhHHHHHHH-HhhcccccCCCCccEEEeCCCc--hhhHHHHHHcCCCeEEEecccHHHHHHHhh
Q 012543 79 TTDFVALISVLHVKCAAPFQDCLAK-LLSNAEEKEEEPIACLITDASW--FFTHDVAESLKLPRIVLRSLSVSSSLVYAA 155 (461)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~pDlvi~D~~~--~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~ 155 (461)
.......+..+. ...++. +... .+||+|++.... ..+..+++.+++|+|..........
T Consensus 98 ~~~~~~~~~~~~-------~~~~~~~~~~~------~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~----- 159 (438)
T 3c48_A 98 KEELPTQLAAFT-------GGMLSFTRREK------VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVK----- 159 (438)
T ss_dssp GGGGGGGHHHHH-------HHHHHHHHHHT------CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHH-----
T ss_pred hhHHHHHHHHHH-------HHHHHHHHhcc------CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcccc-----
Confidence 111111111111 111222 2221 249999987532 2344577888999988655422110
Q ss_pred hhhhhhcCCCCCCCCCCCcccCCCCCCCCCCCCCccccchhhhHHHHHHHHHHhccCccEEEEcChhHhhHHHHHHHHhh
Q 012543 156 LPVLSQKGYFPIQDSHDLEAPVPELPPLRMKDIPVIETLYQETLHQFAAEAINQMKASSGCIWNSVQELEQDSLAKFHRE 235 (461)
Q Consensus 156 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~ 235 (461)
....... . .......... .......++.++..+....+.- ...
T Consensus 160 ------~~~~~~~------------------~------~~~~~~~~~~--~~~~~~~~d~ii~~s~~~~~~~-----~~~ 202 (438)
T 3c48_A 160 ------NSYRDDS------------------D------TPESEARRIC--EQQLVDNADVLAVNTQEEMQDL-----MHH 202 (438)
T ss_dssp ------SCC----------------------C------CHHHHHHHHH--HHHHHHHCSEEEESSHHHHHHH-----HHH
T ss_pred ------ccccccc------------------C------CcchHHHHHH--HHHHHhcCCEEEEcCHHHHHHH-----HHH
Confidence 0000000 0 0000011111 1223456788888886655431 111
Q ss_pred CC---CCccccCcCccCCCCCcCCCccCc--chhhhhcCCCCCCeEEEEEccccccCCHHHHHHHHHHHHhC-------C
Q 012543 236 FP---IPSFPIGPFHKYYPASASSLLSQD--RICISRLDKQAPKSVIYVSFGSIAAIDETKFLEVAWGLANS-------K 303 (461)
Q Consensus 236 ~~---~~~~~vG~~~~~~~~~~~~~~~~~--~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-------~ 303 (461)
++ .++..+..-...... ...+.. ..+.+.+.- +.+..+++..|+... ...+..++++++.. +
T Consensus 203 ~g~~~~k~~vi~ngvd~~~~---~~~~~~~~~~~r~~~~~-~~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~p~~~ 276 (438)
T 3c48_A 203 YDADPDRISVVSPGADVELY---SPGNDRATERSRRELGI-PLHTKVVAFVGRLQP--FKGPQVLIKAVAALFDRDPDRN 276 (438)
T ss_dssp HCCCGGGEEECCCCCCTTTS---CCC----CHHHHHHTTC-CSSSEEEEEESCBSG--GGCHHHHHHHHHHHHHHCTTCS
T ss_pred hCCChhheEEecCCcccccc---CCcccchhhhhHHhcCC-CCCCcEEEEEeeecc--cCCHHHHHHHHHHHHhhCCCcc
Confidence 12 123344432221111 000000 012333322 234456777788654 22233333333322 2
Q ss_pred CceEEEECCCccCCchhcccCchhHHH-HhcCCCceeeecChh---hhhcCCCCCccccc----cCchHHHHHhhcCCcc
Q 012543 304 VPFLWVVRPGLVRGAEWIELLPRGFLE-MLDGRGHIVKWAPQQ---EVLAHPATGAFWTH----CGWNSTLESMCEGVPM 375 (461)
Q Consensus 304 ~~~i~~~~~~~~~~~~~~~~lp~~~~~-~~~~~~~~~~~vp~~---~lL~~~~~~~~I~H----GG~gs~~eal~~GvP~ 375 (461)
.++ ++++.....+.. ...+.+-+.+ ...+++.+.+++|+. .++..+|+ +|.- |...++.||+++|+|+
T Consensus 277 ~~l-~i~G~~~~~g~~-~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~Pv 352 (438)
T 3c48_A 277 LRV-IICGGPSGPNAT-PDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPV 352 (438)
T ss_dssp EEE-EEECCBC-------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCE
T ss_pred eEE-EEEeCCCCCCcH-HHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCE
Confidence 333 333331000000 1111111111 123577888999874 47888998 6654 3356899999999999
Q ss_pred ccCcccchhhhhHHHHHHhhhceeecCCccCHHHHHHHHHHHhcchh-HHHHHHHHHHHHHHHHHHhhcCCChHHHHHHH
Q 012543 376 ICQPCHGEQMVIARYVSDVWKVGLHLERKLERGEVERAIRRVMVDAE-GREMRNRAAILKEKLDLCTKQGSSSYQSLENL 454 (461)
Q Consensus 376 l~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l 454 (461)
|+.+. ......+++. +.|...+. -+.+++.++|.++++|++ ...+.+++++..+.+. .++.++.+
T Consensus 353 I~~~~----~~~~e~i~~~-~~g~~~~~-~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~s--------~~~~~~~~ 418 (438)
T 3c48_A 353 IAARV----GGLPIAVAEG-ETGLLVDG-HSPHAWADALATLLDDDETRIRMGEDAVEHARTFS--------WAATAAQL 418 (438)
T ss_dssp EEESC----TTHHHHSCBT-TTEEEESS-CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH--------HHHHHHHH
T ss_pred EecCC----CChhHHhhCC-CcEEECCC-CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCC--------HHHHHHHH
Confidence 98753 4455566663 67877764 588999999999999843 3345555555554433 55555666
Q ss_pred HHHHHc
Q 012543 455 ISYILS 460 (461)
Q Consensus 455 ~~~l~~ 460 (461)
.+.+++
T Consensus 419 ~~~~~~ 424 (438)
T 3c48_A 419 SSLYND 424 (438)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555543
No 27
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.43 E-value=8.9e-12 Score=121.38 Aligned_cols=346 Identities=12% Similarity=0.031 Sum_probs=186.3
Q ss_pred CCCeEEEEcC--C--CccCHHHHHHHHHHHHhCCCeEEEEeCCCCCC---CCCCCCCceEEEcCCCCCCCcCCcccHHHH
Q 012543 13 KGRRLILFPL--P--FQGHINPMLQLANILYSKGFSITIIHTKFNSP---NPSNYPHFTFCSIQDGLSETEASTTDFVAL 85 (461)
Q Consensus 13 ~~~~il~~~~--~--~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (461)
++|||++++. + ..|.-..+..+++.| +||+|++++...... ......++.+..++....- ... ..
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~ 74 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDKTLDYEVIRWPRSVML-----PTP-TT 74 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHTTCSSEEEEESSSSCC-----SCH-HH
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhccccceEEEEccccccc-----cch-hh
Confidence 3678888764 3 468888889999999 799999999853321 1112356778777642110 111 00
Q ss_pred HHHHHHHcchhHHHHHHHHhhcccccCCCCccEEEeCCCc--hhhHHHHHHcCCCeEEEecccHHHHHHHhhhhhhhhcC
Q 012543 86 ISVLHVKCAAPFQDCLAKLLSNAEEKEEEPIACLITDASW--FFTHDVAESLKLPRIVLRSLSVSSSLVYAALPVLSQKG 163 (461)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pDlvi~D~~~--~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 163 (461)
... +.++++. .+||+|++.... .....+++.+++|.+++........ .
T Consensus 75 -----------~~~-l~~~~~~------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~---~--------- 124 (394)
T 3okp_A 75 -----------AHA-MAEIIRE------REIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVG---W--------- 124 (394)
T ss_dssp -----------HHH-HHHHHHH------TTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHH---H---------
T ss_pred -----------HHH-HHHHHHh------cCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhh---h---------
Confidence 111 1222222 779999987544 3345568889999665433311100 0
Q ss_pred CCCCCCCCCCcccCCCCCCCCCCCCCccccchhhhHHHHHHHHHHhccCccEEEEcChhHhhHHHHHHHHhhCC--CCcc
Q 012543 164 YFPIQDSHDLEAPVPELPPLRMKDIPVIETLYQETLHQFAAEAINQMKASSGCIWNSVQELEQDSLAKFHREFP--IPSF 241 (461)
Q Consensus 164 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~--~~~~ 241 (461)
......... .......++.++..+....+.- ...+. .++.
T Consensus 125 ------------------------------~~~~~~~~~---~~~~~~~~d~ii~~s~~~~~~~-----~~~~~~~~~~~ 166 (394)
T 3okp_A 125 ------------------------------SMLPGSRQS---LRKIGTEVDVLTYISQYTLRRF-----KSAFGSHPTFE 166 (394)
T ss_dssp ------------------------------TTSHHHHHH---HHHHHHHCSEEEESCHHHHHHH-----HHHHCSSSEEE
T ss_pred ------------------------------hhcchhhHH---HHHHHHhCCEEEEcCHHHHHHH-----HHhcCCCCCeE
Confidence 000000111 1222356788888776555431 12111 2344
Q ss_pred ccCcCccCCCCCcCCCccCcchhhhhcCCCCCCeEEEEEccccccCCHHHHHHHHHHHHhC-----CCceEEEECCCccC
Q 012543 242 PIGPFHKYYPASASSLLSQDRICISRLDKQAPKSVIYVSFGSIAAIDETKFLEVAWGLANS-----KVPFLWVVRPGLVR 316 (461)
Q Consensus 242 ~vG~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~ 316 (461)
.+..-...... ..........+.+.+.. +++..+++..|+... ...+..++++++.+ +.+++++ +.+..
T Consensus 167 vi~ngv~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~~l~i~-G~g~~- 240 (394)
T 3okp_A 167 HLPSGVDVKRF-TPATPEDKSATRKKLGF-TDTTPVIACNSRLVP--RKGQDSLIKAMPQVIAARPDAQLLIV-GSGRY- 240 (394)
T ss_dssp ECCCCBCTTTS-CCCCHHHHHHHHHHTTC-CTTCCEEEEESCSCG--GGCHHHHHHHHHHHHHHSTTCEEEEE-CCCTT-
T ss_pred EecCCcCHHHc-CCCCchhhHHHHHhcCC-CcCceEEEEEecccc--ccCHHHHHHHHHHHHhhCCCeEEEEE-cCchH-
Confidence 44432221111 00000011223333332 234467777888653 22233344443322 4454444 33210
Q ss_pred CchhcccCchhHHHHhcCCCceeeecChhh---hhcCCCCCcccc-----------ccCchHHHHHhhcCCccccCcccc
Q 012543 317 GAEWIELLPRGFLEMLDGRGHIVKWAPQQE---VLAHPATGAFWT-----------HCGWNSTLESMCEGVPMICQPCHG 382 (461)
Q Consensus 317 ~~~~~~~lp~~~~~~~~~~~~~~~~vp~~~---lL~~~~~~~~I~-----------HGG~gs~~eal~~GvP~l~~P~~~ 382 (461)
...+..-. ....+++.+.+|+|+.+ ++..+|+ +|. -|.-.++.||+++|+|+|+.+..+
T Consensus 241 ----~~~l~~~~-~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~ 313 (394)
T 3okp_A 241 ----ESTLRRLA-TDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGG 313 (394)
T ss_dssp ----HHHHHHHT-GGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTT
T ss_pred ----HHHHHHHH-hcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeCCCC
Confidence 01111111 22346678889998655 7888998 775 566679999999999999976532
Q ss_pred hhhhhHHHHHHhhhceeecCCccCHHHHHHHHHHHhcchh-HHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHcC
Q 012543 383 EQMVIARYVSDVWKVGLHLERKLERGEVERAIRRVMVDAE-GREMRNRAAILKEKLDLCTKQGSSSYQSLENLISYILSY 461 (461)
Q Consensus 383 DQ~~na~~v~~~lG~G~~l~~~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~l~~~ 461 (461)
....+.+ |.|...+. -+.+++.++|.++++|++ ...+.+++++... +.-+.++.++.+.+.++++
T Consensus 314 ----~~e~i~~--~~g~~~~~-~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~-------~~~s~~~~~~~~~~~~~~~ 379 (394)
T 3okp_A 314 ----APETVTP--ATGLVVEG-SDVDKLSELLIELLDDPIRRAAMGAAGRAHVE-------AEWSWEIMGERLTNILQSE 379 (394)
T ss_dssp ----GGGGCCT--TTEEECCT-TCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH-------HHTBHHHHHHHHHHHHHSC
T ss_pred ----hHHHHhc--CCceEeCC-CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH-------HhCCHHHHHHHHHHHHHHh
Confidence 3333443 56766654 589999999999999832 2233334333322 3446788888888887764
No 28
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.35 E-value=6.9e-11 Score=115.58 Aligned_cols=113 Identities=9% Similarity=0.097 Sum_probs=77.9
Q ss_pred cCCCceeeecChh---hhhcCCCCCcccc----ccCc-hHHHHHhhcCCccccCcccchhhhhHHHHHHhhhceeecCCc
Q 012543 333 DGRGHIVKWAPQQ---EVLAHPATGAFWT----HCGW-NSTLESMCEGVPMICQPCHGEQMVIARYVSDVWKVGLHLERK 404 (461)
Q Consensus 333 ~~~~~~~~~vp~~---~lL~~~~~~~~I~----HGG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~l~~~ 404 (461)
.+++.+.+++|+. .++..+++ +|. +.|. .++.||+++|+|+|+.+. ......+++. +.|...+.
T Consensus 262 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~- 333 (406)
T 2gek_A 262 AGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLADG-DAGRLVPV- 333 (406)
T ss_dssp GGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTTT-TSSEECCT-
T ss_pred cCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcCC-CceEEeCC-
Confidence 3566888999985 58889998 663 3343 489999999999999865 4566677763 67877764
Q ss_pred cCHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHc
Q 012543 405 LERGEVERAIRRVMVDAEGREMRNRAAILKEKLDLCTKQGSSSYQSLENLISYILS 460 (461)
Q Consensus 405 ~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~l~~ 460 (461)
-+.+++.++|.++++| +..++ ++++..++... .-+.++.++.+.+.+++
T Consensus 334 ~d~~~l~~~i~~l~~~---~~~~~---~~~~~~~~~~~-~~s~~~~~~~~~~~~~~ 382 (406)
T 2gek_A 334 DDADGMAAALIGILED---DQLRA---GYVARASERVH-RYDWSVVSAQIMRVYET 382 (406)
T ss_dssp TCHHHHHHHHHHHHHC---HHHHH---HHHHHHHHHGG-GGBHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcC---HHHHH---HHHHHHHHHHH-hCCHHHHHHHHHHHHHH
Confidence 5889999999999998 43322 22222222222 34566677777666654
No 29
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.32 E-value=2e-09 Score=104.85 Aligned_cols=350 Identities=13% Similarity=0.043 Sum_probs=176.9
Q ss_pred CeEEEEcCCC-ccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCcCCcccHHHHHHHHHHHc
Q 012543 15 RRLILFPLPF-QGHINPMLQLANILYSKGFSITIIHTKFNSPNPSNYPHFTFCSIQDGLSETEASTTDFVALISVLHVKC 93 (461)
Q Consensus 15 ~~il~~~~~~-~GHi~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (461)
.++....+|. .|.-.-...|++.|+++||+|++++............++.+..++.......... ... ...
T Consensus 16 ~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~-~~~----- 87 (394)
T 2jjm_A 16 LKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLNKVYPNIYFHEVTVNQYSVFQYP--PYD-LAL----- 87 (394)
T ss_dssp CEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC----CCCTTEEEECCCCC----CCSC--CHH-HHH-----
T ss_pred eeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcccccCCceEEEecccccccccccc--ccc-HHH-----
Confidence 5788877774 4666778899999999999999998853222112235676666542110000000 000 000
Q ss_pred chhHHHHHHHHhhcccccCCCCccEEEeCCCch--hhHHHHH-Hc--CCCeEEEecccHHHHHHHhhhhhhhhcCCCCCC
Q 012543 94 AAPFQDCLAKLLSNAEEKEEEPIACLITDASWF--FTHDVAE-SL--KLPRIVLRSLSVSSSLVYAALPVLSQKGYFPIQ 168 (461)
Q Consensus 94 ~~~~~~~~~~l~~~~~~~~~~~pDlvi~D~~~~--~a~~~A~-~l--giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 168 (461)
.....+.+.+ .+||+|++..... ....++. .+ ++|+|........ .. . ...
T Consensus 88 ---~~~l~~~l~~-------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~----~~---------~-~~~ 143 (394)
T 2jjm_A 88 ---ASKMAEVAQR-------ENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDI----TV---------L-GSD 143 (394)
T ss_dssp ---HHHHHHHHHH-------HTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHH----HT---------T-TTC
T ss_pred ---HHHHHHHHHH-------cCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcc----cc---------c-CCC
Confidence 1111122222 6799999974432 2233443 33 5998876544110 00 0 000
Q ss_pred CCCCCcccCCCCCCCCCCCCCccccchhhhHHHHHHHHHHhccCccEEEEcChhHhhHHHHHHHHhhCC--CCccccCcC
Q 012543 169 DSHDLEAPVPELPPLRMKDIPVIETLYQETLHQFAAEAINQMKASSGCIWNSVQELEQDSLAKFHREFP--IPSFPIGPF 246 (461)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~--~~~~~vG~~ 246 (461)
.....+ ....+..++.++..+....+. ....+. .++..++.-
T Consensus 144 -------------------------~~~~~~------~~~~~~~ad~ii~~s~~~~~~-----~~~~~~~~~~~~vi~ng 187 (394)
T 2jjm_A 144 -------------------------PSLNNL------IRFGIEQSDVVTAVSHSLINE-----THELVKPNKDIQTVYNF 187 (394)
T ss_dssp -------------------------TTTHHH------HHHHHHHSSEEEESCHHHHHH-----HHHHTCCSSCEEECCCC
T ss_pred -------------------------HHHHHH------HHHHHhhCCEEEECCHHHHHH-----HHHhhCCcccEEEecCC
Confidence 000001 112234677888877654442 122222 234444433
Q ss_pred ccCCCCCcCCCccCcchhhhhcCCCCCCeEEEEEccccccCCHHHHHHHHHHHHh----CCCceEEEECCCccCCchhcc
Q 012543 247 HKYYPASASSLLSQDRICISRLDKQAPKSVIYVSFGSIAAIDETKFLEVAWGLAN----SKVPFLWVVRPGLVRGAEWIE 322 (461)
Q Consensus 247 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~----~~~~~i~~~~~~~~~~~~~~~ 322 (461)
...... .......+.+.+... +++.+++..|.... ...+..++++++. .+.+++ +++.+.. ..
T Consensus 188 v~~~~~----~~~~~~~~~~~~~~~-~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~-i~G~g~~-----~~ 254 (394)
T 2jjm_A 188 IDERVY----FKRDMTQLKKEYGIS-ESEKILIHISNFRK--VKRVQDVVQAFAKIVTEVDAKLL-LVGDGPE-----FC 254 (394)
T ss_dssp CCTTTC----CCCCCHHHHHHTTCC----CEEEEECCCCG--GGTHHHHHHHHHHHHHSSCCEEE-EECCCTT-----HH
T ss_pred ccHHhc----CCcchHHHHHHcCCC-CCCeEEEEeecccc--ccCHHHHHHHHHHHHhhCCCEEE-EECCchH-----HH
Confidence 221111 000112233333321 23456667787664 2233334444333 244443 3443320 01
Q ss_pred cCchhHHH-HhcCCCceeeecCh-hhhhcCCCCCccc----cccCchHHHHHhhcCCccccCcccchhhhhHHHHHHhhh
Q 012543 323 LLPRGFLE-MLDGRGHIVKWAPQ-QEVLAHPATGAFW----THCGWNSTLESMCEGVPMICQPCHGEQMVIARYVSDVWK 396 (461)
Q Consensus 323 ~lp~~~~~-~~~~~~~~~~~vp~-~~lL~~~~~~~~I----~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG 396 (461)
.+.+-+.+ ...+++.+.++..+ ..++..+|+ +| .-|..+++.||+++|+|+|+.+.. .....+++. +
T Consensus 255 ~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~e~v~~~-~ 327 (394)
T 2jjm_A 255 TILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIPEVIQHG-D 327 (394)
T ss_dssp HHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----TSTTTCCBT-T
T ss_pred HHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----ChHHHhhcC-C
Confidence 11111110 01245677776554 458999998 77 556677999999999999987653 233344442 5
Q ss_pred ceeecCCccCHHHHHHHHHHHhcchh-HHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHc
Q 012543 397 VGLHLERKLERGEVERAIRRVMVDAE-GREMRNRAAILKEKLDLCTKQGSSSYQSLENLISYILS 460 (461)
Q Consensus 397 ~G~~l~~~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~l~~ 460 (461)
.|...+. -+.+++.++|.++++|++ ...+.+++++.. .+.-+.++.++.+.+.+++
T Consensus 328 ~g~~~~~-~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~-------~~~~s~~~~~~~~~~~~~~ 384 (394)
T 2jjm_A 328 TGYLCEV-GDTTGVADQAIQLLKDEELHRNMGERARESV-------YEQFRSEKIVSQYETIYYD 384 (394)
T ss_dssp TEEEECT-TCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH-------HHHSCHHHHHHHHHHHHHH
T ss_pred ceEEeCC-CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH-------HHhCCHHHHHHHHHHHHHH
Confidence 6766654 578999999999999832 223334443333 2345577777777777765
No 30
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.31 E-value=2.4e-11 Score=117.77 Aligned_cols=158 Identities=12% Similarity=0.086 Sum_probs=93.7
Q ss_pred CCeEEEEEccccccCCHHHHHHHHHHHHhC-----CCceEEEECCCccCCchhcccCchhHHHHh--cCCCceeeecCh-
Q 012543 273 PKSVIYVSFGSIAAIDETKFLEVAWGLANS-----KVPFLWVVRPGLVRGAEWIELLPRGFLEML--DGRGHIVKWAPQ- 344 (461)
Q Consensus 273 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~--~~~~~~~~~vp~- 344 (461)
+++.|+++.|...... .+..++++++.. +..+++..+.+. .+.+.+.+.. .+++.+.+++++
T Consensus 197 ~~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~--------~~~~~l~~~~~~~~~v~~~g~~g~~ 266 (376)
T 1v4v_A 197 EGPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNP--------VVREAVFPVLKGVRNFVLLDPLEYG 266 (376)
T ss_dssp SSCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCH--------HHHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCH--------HHHHHHHHHhccCCCEEEECCCCHH
Confidence 3567778777553221 344455555432 344444333221 0112222221 246777765555
Q ss_pred --hhhhcCCCCCccccccCchHHHHHhhcCCccccCcccchhhhhHHHHHHhhhceeecCCccCHHHHHHHHHHHhcchh
Q 012543 345 --QEVLAHPATGAFWTHCGWNSTLESMCEGVPMICQPCHGEQMVIARYVSDVWKVGLHLERKLERGEVERAIRRVMVDAE 422 (461)
Q Consensus 345 --~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~l~~~i~~ll~~~~ 422 (461)
..++..+|+ ||+.+| |.+.||+++|+|+|+.+..++++.. + +. |.|..+. .++++|.++|.++++|
T Consensus 267 ~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~---~-~~-g~g~lv~--~d~~~la~~i~~ll~d-- 334 (376)
T 1v4v_A 267 SMAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG---L-KA-GILKLAG--TDPEGVYRVVKGLLEN-- 334 (376)
T ss_dssp HHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH---H-HH-TSEEECC--SCHHHHHHHHHHHHTC--
T ss_pred HHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh---h-cC-CceEECC--CCHHHHHHHHHHHHhC--
Confidence 469999999 999884 5566999999999998766666552 3 43 8887774 3899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHH
Q 012543 423 GREMRNRAAILKEKLDLCTKQGSSSYQSLENLISY 457 (461)
Q Consensus 423 ~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~ 457 (461)
+..+++..+-+. ....+++.++.++.+.+.
T Consensus 335 -~~~~~~~~~~~~----~~~~~~~~~~i~~~i~~~ 364 (376)
T 1v4v_A 335 -PEELSRMRKAKN----PYGDGKAGLMVARGVAWR 364 (376)
T ss_dssp -HHHHHHHHHSCC----SSCCSCHHHHHHHHHHHH
T ss_pred -hHhhhhhcccCC----CCCCChHHHHHHHHHHHH
Confidence 544433332111 122344555555555443
No 31
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.30 E-value=1.8e-11 Score=119.30 Aligned_cols=349 Identities=10% Similarity=0.033 Sum_probs=174.7
Q ss_pred ccCCCCeEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCCCCCCCC---CCCCce-EEEcCCCCCCCcCCcccHHH
Q 012543 10 QQKKGRRLILFPLPFQGHINPMLQLANILYSK-GFSITIIHTKFNSPNPS---NYPHFT-FCSIQDGLSETEASTTDFVA 84 (461)
Q Consensus 10 ~~~~~~~il~~~~~~~GHi~p~l~La~~L~~r-Gh~V~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~ 84 (461)
+..+++||++++ |+.....-+.+|.++|+++ |+++.++.+........ ...+++ -..+. +. ....+...
T Consensus 21 ~~~~m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~~~i~~~~~l~--~~---~~~~~~~~ 94 (396)
T 3dzc_A 21 QSNAMKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELFSITPDFDLN--IM---EPGQTLNG 94 (396)
T ss_dssp ---CCEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHHTTCCCSEECC--CC---CTTCCHHH
T ss_pred HhCCCCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhcCCCCceeee--cC---CCCCCHHH
Confidence 333467888887 7777788889999999987 79998777642211000 001111 00111 00 01122222
Q ss_pred HHHHHHHHcchhHHHHHHHHhhcccccCCCCccEEEeCC--Cc-hhhHHHHHHcCCCeEEEecccHHHHHHHhhhhhhhh
Q 012543 85 LISVLHVKCAAPFQDCLAKLLSNAEEKEEEPIACLITDA--SW-FFTHDVAESLKLPRIVLRSLSVSSSLVYAALPVLSQ 161 (461)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pDlvi~D~--~~-~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 161 (461)
.. .. .+....+.+.+ ++||+|++-. .+ +.+..+|..+|||++.+...
T Consensus 95 ~~---~~----~~~~l~~~l~~-------~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag---------------- 144 (396)
T 3dzc_A 95 VT---SK----ILLGMQQVLSS-------EQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAG---------------- 144 (396)
T ss_dssp HH---HH----HHHHHHHHHHH-------HCCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCC----------------
T ss_pred HH---HH----HHHHHHHHHHh-------cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECC----------------
Confidence 11 11 12222222222 7899999743 22 44567899999998764211
Q ss_pred cCCCCCCCCCCCcccCCCCCCCCCCCCCccccchhhhHHHHHHHHHHhccCccEEEEcChhHhhHHHHHHHHhhCC-CCc
Q 012543 162 KGYFPIQDSHDLEAPVPELPPLRMKDIPVIETLYQETLHQFAAEAINQMKASSGCIWNSVQELEQDSLAKFHREFP-IPS 240 (461)
Q Consensus 162 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~-~~~ 240 (461)
. . .+.+.. .......+. . ....++.++..+...-+.- ...-.+ .++
T Consensus 145 --~---r-------------s~~~~~------~~~~~~~r~---~--~~~~a~~~~~~se~~~~~l----~~~G~~~~ki 191 (396)
T 3dzc_A 145 --L---R-------------TGNIYS------PWPEEGNRK---L--TAALTQYHFAPTDTSRANL----LQENYNAENI 191 (396)
T ss_dssp --C---C-------------CSCTTS------STTHHHHHH---H--HHHTCSEEEESSHHHHHHH----HHTTCCGGGE
T ss_pred --c---c-------------cccccc------CCcHHHHHH---H--HHHhcCEEECCCHHHHHHH----HHcCCCcCcE
Confidence 0 0 000000 000001111 0 0124567777665543321 111111 227
Q ss_pred cccCcCccCCCCCcCCCccC-------cchhhhhcC-CCCCCeEEEEEccccccCCHHHHHHHHHHHHhC-----CCceE
Q 012543 241 FPIGPFHKYYPASASSLLSQ-------DRICISRLD-KQAPKSVIYVSFGSIAAIDETKFLEVAWGLANS-----KVPFL 307 (461)
Q Consensus 241 ~~vG~~~~~~~~~~~~~~~~-------~~~l~~~l~-~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i 307 (461)
.++|........ ...+. ..++.+.++ -.+++++|+++.+-..... ..+..++++++.+ +.+++
T Consensus 192 ~vvGn~~~d~~~---~~~~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~-~~~~~ll~A~~~l~~~~~~~~~v 267 (396)
T 3dzc_A 192 FVTGNTVIDALL---AVREKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFG-GGFERICQALITTAEQHPECQIL 267 (396)
T ss_dssp EECCCHHHHHHH---HHHHHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCT-THHHHHHHHHHHHHHHCTTEEEE
T ss_pred EEECCcHHHHHH---HhhhhcccchhhHHHHHHHhCccCCCCCEEEEEECCcccch-hHHHHHHHHHHHHHHhCCCceEE
Confidence 778853322110 00000 022333333 1234677777753222211 2245666665543 34555
Q ss_pred EEECCCccCCchhcccCchhHHHH--hcCCCceeeecCh---hhhhcCCCCCccccccCchHHHHHhhcCCccccCcccc
Q 012543 308 WVVRPGLVRGAEWIELLPRGFLEM--LDGRGHIVKWAPQ---QEVLAHPATGAFWTHCGWNSTLESMCEGVPMICQPCHG 382 (461)
Q Consensus 308 ~~~~~~~~~~~~~~~~lp~~~~~~--~~~~~~~~~~vp~---~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~ 382 (461)
+..+.+. .+.+.+.+. ...++.+.+++++ ..++..+++ +|+-.| |.+.||+++|+|+|+..-.+
T Consensus 268 ~~~g~~~--------~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~ 336 (396)
T 3dzc_A 268 YPVHLNP--------NVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETT 336 (396)
T ss_dssp EECCBCH--------HHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSC
T ss_pred EEeCCCh--------HHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCC
Confidence 4433221 011222221 1246777777754 458889998 999988 66689999999999986555
Q ss_pred hhhhhHHHHHHhhhceeecCCccCHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHc
Q 012543 383 EQMVIARYVSDVWKVGLHLERKLERGEVERAIRRVMVDAEGREMRNRAAILKEKLDLCTKQGSSSYQSLENLISYILS 460 (461)
Q Consensus 383 DQ~~na~~v~~~lG~G~~l~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~l~~ 460 (461)
+++. .+ +. |.++.+.. ++++|.+++.++++| +..+++ |++..+ .-+..++.+.+++.|+|
T Consensus 337 ~~~e---~v-~~-G~~~lv~~--d~~~l~~ai~~ll~d---~~~~~~---m~~~~~-----~~~~~~aa~ri~~~l~~ 396 (396)
T 3dzc_A 337 ERPE---AV-AA-GTVKLVGT--NQQQICDALSLLLTD---PQAYQA---MSQAHN-----PYGDGKACQRIADILAK 396 (396)
T ss_dssp SCHH---HH-HH-TSEEECTT--CHHHHHHHHHHHHHC---HHHHHH---HHTSCC-----TTCCSCHHHHHHHHHHC
T ss_pred cchH---HH-Hc-CceEEcCC--CHHHHHHHHHHHHcC---HHHHHH---HhhccC-----CCcCChHHHHHHHHHhC
Confidence 5432 33 43 87765543 799999999999999 554443 322221 22334455556655543
No 32
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.27 E-value=3.6e-11 Score=117.41 Aligned_cols=108 Identities=14% Similarity=0.140 Sum_probs=74.9
Q ss_pred CCCceeeecCh---hhhhcCCCCCccccccCchHHHHHhhcCCccccCcccchhhhhHHHHHHhhhceeecCCccCHHHH
Q 012543 334 GRGHIVKWAPQ---QEVLAHPATGAFWTHCGWNSTLESMCEGVPMICQPCHGEQMVIARYVSDVWKVGLHLERKLERGEV 410 (461)
Q Consensus 334 ~~~~~~~~vp~---~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~l 410 (461)
.++.+.+++++ ..++..+++ +|+-.|. .+.||+++|+|+|++|-.++++. .+ +. |.|+.+.. ++++|
T Consensus 282 ~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg-~~~EA~a~g~PvV~~~~~~~~~e---~v-~~-g~~~lv~~--d~~~l 351 (403)
T 3ot5_A 282 ERIHLIEPLDAIDFHNFLRKSYL--VFTDSGG-VQEEAPGMGVPVLVLRDTTERPE---GI-EA-GTLKLIGT--NKENL 351 (403)
T ss_dssp TTEEEECCCCHHHHHHHHHHEEE--EEECCHH-HHHHGGGTTCCEEECCSSCSCHH---HH-HH-TSEEECCS--CHHHH
T ss_pred CCEEEeCCCCHHHHHHHHHhcCE--EEECCcc-HHHHHHHhCCCEEEecCCCcchh---he-eC-CcEEEcCC--CHHHH
Confidence 56788888864 458889998 9988753 33699999999999976666554 23 44 88876653 89999
Q ss_pred HHHHHHHhcchhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012543 411 ERAIRRVMVDAEGREMRNRAAILKEKLDLCTKQGSSSYQSLENLISYI 458 (461)
Q Consensus 411 ~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~l 458 (461)
.+++.++++| +..+++..+-+.. ..+++++++.++.|.+++
T Consensus 352 ~~ai~~ll~~---~~~~~~m~~~~~~----~g~~~aa~rI~~~l~~~l 392 (403)
T 3ot5_A 352 IKEALDLLDN---KESHDKMAQAANP----YGDGFAANRILAAIKSHF 392 (403)
T ss_dssp HHHHHHHHHC---HHHHHHHHHSCCT----TCCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcC---HHHHHHHHhhcCc----ccCCcHHHHHHHHHHHHh
Confidence 9999999999 5544433322222 225666666666666554
No 33
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.25 E-value=7.1e-11 Score=114.72 Aligned_cols=162 Identities=14% Similarity=0.135 Sum_probs=96.7
Q ss_pred CCeEEEEEccccccCCHHHHHHHHHHHHhC-----CCceEEEECCCccCCchhcccCchhHHHHh--cCCCceeeecCh-
Q 012543 273 PKSVIYVSFGSIAAIDETKFLEVAWGLANS-----KVPFLWVVRPGLVRGAEWIELLPRGFLEML--DGRGHIVKWAPQ- 344 (461)
Q Consensus 273 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~--~~~~~~~~~vp~- 344 (461)
+++.++++.|...... ..+..+++++... +.++++..+.+. .+.+.+.+.. .+++.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~~--------~~~~~l~~~~~~~~~v~~~g~~~~~ 274 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLNP--------NVREPVNRILGHVKNVILIDPQEYL 274 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBCH--------HHHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCCH--------HHHHHHHHHhhcCCCEEEeCCCCHH
Confidence 4677888888765321 2344555555432 344444322211 0112222221 256777666665
Q ss_pred --hhhhcCCCCCccccccCchHHHHHhhcCCccccCcccchhhhhHHHHHHhhhceeecCCccCHHHHHHHHHHHhcchh
Q 012543 345 --QEVLAHPATGAFWTHCGWNSTLESMCEGVPMICQPCHGEQMVIARYVSDVWKVGLHLERKLERGEVERAIRRVMVDAE 422 (461)
Q Consensus 345 --~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~l~~~i~~ll~~~~ 422 (461)
..++..+|+ +|+.+| |++.||+++|+|+|+.+..++.+. +.+. |.|..+.. ++++|.++|.++++|
T Consensus 275 ~~~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e----~v~~-g~g~lv~~--d~~~la~~i~~ll~d-- 342 (384)
T 1vgv_A 275 PFVWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERPE----AVTA-GTVRLVGT--DKQRIVEEVTRLLKD-- 342 (384)
T ss_dssp HHHHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCHH----HHHH-TSEEEECS--SHHHHHHHHHHHHHC--
T ss_pred HHHHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcch----hhhC-CceEEeCC--CHHHHHHHHHHHHhC--
Confidence 458899999 998885 458899999999999987444332 3343 88887764 899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHc
Q 012543 423 GREMRNRAAILKEKLDLCTKQGSSSYQSLENLISYILS 460 (461)
Q Consensus 423 ~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~l~~ 460 (461)
+..+++ +++..++ ..+..+.++.++.+.+.+++
T Consensus 343 -~~~~~~---~~~~~~~-~~~~~~~~~i~~~~~~~~~~ 375 (384)
T 1vgv_A 343 -ENEYQA---MSRAHNP-YGDGQACSRILEALKNNRIS 375 (384)
T ss_dssp -HHHHHH---HHSSCCT-TCCSCHHHHHHHHHHHTCCC
T ss_pred -hHHHhh---hhhccCC-CcCCCHHHHHHHHHHHHHHh
Confidence 443332 2222221 11445555556666555443
No 34
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.23 E-value=1.1e-08 Score=98.74 Aligned_cols=148 Identities=14% Similarity=0.172 Sum_probs=93.4
Q ss_pred CCeEEEEEccccccCCHHHHHHHHHHHHhCCC----c-eEEEECCCccCCchhcccCchhHHH-HhcCCCceeeecCh-h
Q 012543 273 PKSVIYVSFGSIAAIDETKFLEVAWGLANSKV----P-FLWVVRPGLVRGAEWIELLPRGFLE-MLDGRGHIVKWAPQ-Q 345 (461)
Q Consensus 273 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~----~-~i~~~~~~~~~~~~~~~~lp~~~~~-~~~~~~~~~~~vp~-~ 345 (461)
+++.+++..|+... ...+..++++++.... . .+++++.+. . ..+.+-+.+ ...+++.+.++..+ .
T Consensus 194 ~~~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~--~----~~~~~~~~~~~~~~~v~~~g~~~~~~ 265 (374)
T 2iw1_A 194 EQQNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQDK--P----RKFEALAEKLGVRSNVHFFSGRNDVS 265 (374)
T ss_dssp TTCEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSSC--C----HHHHHHHHHHTCGGGEEEESCCSCHH
T ss_pred CCCeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCCC--H----HHHHHHHHHcCCCCcEEECCCcccHH
Confidence 34567777887653 3445666777776532 1 234444432 0 111111111 11356677777554 4
Q ss_pred hhhcCCCCCcccc----ccCchHHHHHhhcCCccccCcccchhhhhHHHHHHhhhceeecCCccCHHHHHHHHHHHhcch
Q 012543 346 EVLAHPATGAFWT----HCGWNSTLESMCEGVPMICQPCHGEQMVIARYVSDVWKVGLHLERKLERGEVERAIRRVMVDA 421 (461)
Q Consensus 346 ~lL~~~~~~~~I~----HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~l~~~i~~ll~~~ 421 (461)
.++..+|+ +|. -|..+++.||+++|+|+|+... ..+...+++. +.|..+...-+.+++.++|.++++|+
T Consensus 266 ~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~~~~~~~~l~~~i~~l~~~~ 338 (374)
T 2iw1_A 266 ELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIAEPFSQEQLNEVLRKALTQS 338 (374)
T ss_dssp HHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEECSSCCHHHHHHHHHHHHHCH
T ss_pred HHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeCCCCCHHHHHHHHHHHHcCh
Confidence 58899998 775 5667899999999999999764 3456777874 88988863358999999999999983
Q ss_pred h-HHHHHHHHHHHHH
Q 012543 422 E-GREMRNRAAILKE 435 (461)
Q Consensus 422 ~-~~~~~~~a~~l~~ 435 (461)
+ ...+.+++++..+
T Consensus 339 ~~~~~~~~~~~~~~~ 353 (374)
T 2iw1_A 339 PLRMAWAENARHYAD 353 (374)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 3 2344444444443
No 35
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.23 E-value=3.2e-10 Score=108.24 Aligned_cols=125 Identities=14% Similarity=0.093 Sum_probs=83.0
Q ss_pred EEEEccccccCCHHHHHHHHHHHHhCCCceEEEECCCccCCchhcccCchhHHHHhcCCCceeeecChh---hhhcCCCC
Q 012543 277 IYVSFGSIAAIDETKFLEVAWGLANSKVPFLWVVRPGLVRGAEWIELLPRGFLEMLDGRGHIVKWAPQQ---EVLAHPAT 353 (461)
Q Consensus 277 v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~---~lL~~~~~ 353 (461)
+++..|+.. .......++++++..+.+++++-.+.. ...+.+ +.+..++|+.+.+|+++. .++..+|+
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~G~g~~------~~~l~~-~~~~~~~~v~~~g~~~~~~l~~~~~~adv 234 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLAGPAWE------PEYFDE-ITRRYGSTVEPIGEVGGERRLDLLASAHA 234 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEESCCCC------HHHHHH-HHHHHTTTEEECCCCCHHHHHHHHHHCSE
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEEeCccc------HHHHHH-HHHHhCCCEEEeccCCHHHHHHHHHhCCE
Confidence 455567765 334566677777777777655433321 111111 222334788889999986 58889998
Q ss_pred Ccccc--c------------cCchHHHHHhhcCCccccCcccchhhhhHHHHHH--hhhceeecCCccCHHHHHHHHHHH
Q 012543 354 GAFWT--H------------CGWNSTLESMCEGVPMICQPCHGEQMVIARYVSD--VWKVGLHLERKLERGEVERAIRRV 417 (461)
Q Consensus 354 ~~~I~--H------------GG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~--~lG~G~~l~~~~~~~~l~~~i~~l 417 (461)
+|. . |--.++.||+++|+|+|+... ..+...+++ . +.|...+. +.+++.++|.++
T Consensus 235 --~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~-~~g~~~~~--d~~~l~~~i~~l 305 (342)
T 2iuy_A 235 --VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGE-VVGYGTDF--APDEARRTLAGL 305 (342)
T ss_dssp --EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEE-ECCSSSCC--CHHHHHHHHHTS
T ss_pred --EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCC-CceEEcCC--CHHHHHHHHHHH
Confidence 662 2 334689999999999999865 345566655 3 56665553 999999999999
Q ss_pred hc
Q 012543 418 MV 419 (461)
Q Consensus 418 l~ 419 (461)
++
T Consensus 306 ~~ 307 (342)
T 2iuy_A 306 PA 307 (342)
T ss_dssp CC
T ss_pred HH
Confidence 86
No 36
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.21 E-value=1.4e-09 Score=109.62 Aligned_cols=113 Identities=15% Similarity=0.154 Sum_probs=75.6
Q ss_pred cCCCceeeecChhh---hhcCC----CCCccccc----cCchHHHHHhhcCCccccCcccchhhhhHHHHHHhhhceeec
Q 012543 333 DGRGHIVKWAPQQE---VLAHP----ATGAFWTH----CGWNSTLESMCEGVPMICQPCHGEQMVIARYVSDVWKVGLHL 401 (461)
Q Consensus 333 ~~~~~~~~~vp~~~---lL~~~----~~~~~I~H----GG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~l 401 (461)
.+++.+.+++|+.+ ++..+ |+ +|.- |--.++.||+++|+|+|+... ......+.+. +.|..+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDGG-KYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGGG-TSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcCC-ceEEEe
Confidence 46778889998754 77888 88 6632 334589999999999998753 3455556653 578777
Q ss_pred CCccCHHHHHHHHHHHhcchh-HHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHc
Q 012543 402 ERKLERGEVERAIRRVMVDAE-GREMRNRAAILKEKLDLCTKQGSSSYQSLENLISYILS 460 (461)
Q Consensus 402 ~~~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~l~~ 460 (461)
+. -+.+++.++|.++++|++ ...+.+++++... +.-+.++.++.+.+.+++
T Consensus 407 ~~-~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~-------~~fs~~~~~~~~~~~y~~ 458 (499)
T 2r60_A 407 DP-EDPEDIARGLLKAFESEETWSAYQEKGKQRVE-------ERYTWQETARGYLEVIQE 458 (499)
T ss_dssp CT-TCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHH-------HHSBHHHHHHHHHHHHHH
T ss_pred CC-CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH-------HhCCHHHHHHHHHHHHHH
Confidence 65 588999999999999932 2233334333332 334456666666665543
No 37
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.12 E-value=1.4e-09 Score=105.06 Aligned_cols=161 Identities=12% Similarity=0.156 Sum_probs=95.4
Q ss_pred CCeEEEEEccccccCCHHHHHHHHHHHHhC-----CCceEEEECCCccCCchhcccCchhHHHHhc--CCCceeeecChh
Q 012543 273 PKSVIYVSFGSIAAIDETKFLEVAWGLANS-----KVPFLWVVRPGLVRGAEWIELLPRGFLEMLD--GRGHIVKWAPQQ 345 (461)
Q Consensus 273 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~--~~~~~~~~vp~~ 345 (461)
+++.++++.|...... ..+..++++++.. +.+++ ++.+. . ..+.+.+.+... +++.+.+++++.
T Consensus 204 ~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i--~~~g~-~-----~~~~~~~~~~~~~~~~v~~~g~~~~~ 274 (375)
T 3beo_A 204 NNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVV--YPVHM-N-----PVVRETANDILGDYGRIHLIEPLDVI 274 (375)
T ss_dssp TSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEE--EECCS-C-----HHHHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEE--EeCCC-C-----HHHHHHHHHHhhccCCEEEeCCCCHH
Confidence 4667778888654311 3355566665542 33433 33221 0 011122222222 577887777654
Q ss_pred ---hhhcCCCCCccccccCchHHHHHhhcCCccccCcccchhhhhHHHHHHhhhceeecCCccCHHHHHHHHHHHhcchh
Q 012543 346 ---EVLAHPATGAFWTHCGWNSTLESMCEGVPMICQPCHGEQMVIARYVSDVWKVGLHLERKLERGEVERAIRRVMVDAE 422 (461)
Q Consensus 346 ---~lL~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~l~~~i~~ll~~~~ 422 (461)
.++..+|+ +|+.+| |++.||+++|+|+|+....+.. ...+ +. |.|..+.. +.++|.++|.++++|
T Consensus 275 ~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~---~e~v-~~-g~g~~v~~--d~~~la~~i~~ll~~-- 342 (375)
T 3beo_A 275 DFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTER---PEGI-EA-GTLKLAGT--DEETIFSLADELLSD-- 342 (375)
T ss_dssp HHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSC---HHHH-HT-TSEEECCS--CHHHHHHHHHHHHHC--
T ss_pred HHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCC---ceee-cC-CceEEcCC--CHHHHHHHHHHHHhC--
Confidence 58889998 898874 5588999999999988543333 2234 43 88877753 899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHH
Q 012543 423 GREMRNRAAILKEKLDLCTKQGSSSYQSLENLISYIL 459 (461)
Q Consensus 423 ~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~l~ 459 (461)
+..+++ +++..++. .+..+.++.++.+.+.+.
T Consensus 343 -~~~~~~---~~~~~~~~-~~~~~~~~i~~~~~~~~~ 374 (375)
T 3beo_A 343 -KEAHDK---MSKASNPY-GDGRASERIVEAILKHFN 374 (375)
T ss_dssp -HHHHHH---HCCCCCTT-CCSCHHHHHHHHHHHHTT
T ss_pred -hHhHhh---hhhcCCCC-CCCcHHHHHHHHHHHHhh
Confidence 544432 32222221 144556666666666543
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.02 E-value=1.8e-07 Score=91.55 Aligned_cols=112 Identities=14% Similarity=0.116 Sum_probs=77.4
Q ss_pred cCCCceeeecC---h---hhhhcCCCCCcccccc----CchHHHHHhhcCCccccCcccchhhhhHHHHHHhhhceeecC
Q 012543 333 DGRGHIVKWAP---Q---QEVLAHPATGAFWTHC----GWNSTLESMCEGVPMICQPCHGEQMVIARYVSDVWKVGLHLE 402 (461)
Q Consensus 333 ~~~~~~~~~vp---~---~~lL~~~~~~~~I~HG----G~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~l~ 402 (461)
.+++.+.+|++ + ..++..+|+ +|.-. ...++.||+++|+|+|+.+. ..+...+++. +.|...+
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEEC
Confidence 36778888776 2 347888998 76543 45689999999999999764 3455666653 6777665
Q ss_pred CccCHHHHHHHHHHHhcchh-HHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHcC
Q 012543 403 RKLERGEVERAIRRVMVDAE-GREMRNRAAILKEKLDLCTKQGSSSYQSLENLISYILSY 461 (461)
Q Consensus 403 ~~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~l~~~ 461 (461)
+.+++.++|.++++|++ ...+.+++++... +.-+.++.++.+.+.++++
T Consensus 365 ---d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~-------~~fs~~~~~~~~~~~~~~l 414 (416)
T 2x6q_A 365 ---DANEAVEVVLYLLKHPEVSKEMGAKAKERVR-------KNFIITKHMERYLDILNSL 414 (416)
T ss_dssp ---SHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH-------HHTBHHHHHHHHHHHHHTC
T ss_pred ---CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH-------HHcCHHHHHHHHHHHHHHh
Confidence 88999999999999832 2223333333222 3445777788888877654
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.91 E-value=5.2e-10 Score=108.28 Aligned_cols=342 Identities=12% Similarity=0.115 Sum_probs=174.2
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCC-CCCC--CCCceEEEcCC-CCCCCcCCcccHHHHHHHHHH
Q 012543 16 RLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSP-NPSN--YPHFTFCSIQD-GLSETEASTTDFVALISVLHV 91 (461)
Q Consensus 16 ~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~~-~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 91 (461)
++++++ |+.-.+.-+.+|.++|.++ +++.++.+.-... .... ..+|.. +-|+ .+.. ...+..+.......
T Consensus 11 ~~~~v~-GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~~~~~i-~~~~~~l~~---~~~~~~~~~~~~~~ 84 (385)
T 4hwg_A 11 KVMTIV-GTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFFDDMGI-RKPDYFLEV---AADNTAKSIGLVIE 84 (385)
T ss_dssp EEEEEE-CSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHHC-CCC-CCCSEECCC---CCCCSHHHHHHHHH
T ss_pred heeEEE-EcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHHhhCCC-CCCceecCC---CCCCHHHHHHHHHH
Confidence 888876 8888888899999999887 9988887752211 0110 012221 1111 1111 11122222221111
Q ss_pred HcchhHHHHHHHHhhcccccCCCCccEEEeCC--CchhhHHHHHHcCCCeEEEecccHHHHHHHhhhhhhhhcCCCCCCC
Q 012543 92 KCAAPFQDCLAKLLSNAEEKEEEPIACLITDA--SWFFTHDVAESLKLPRIVLRSLSVSSSLVYAALPVLSQKGYFPIQD 169 (461)
Q Consensus 92 ~~~~~~~~~~~~l~~~~~~~~~~~pDlvi~D~--~~~~a~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 169 (461)
. +.+.+++ ++||+|++-. .+.++..+|.++|||++.+... . .
T Consensus 85 ~----l~~~l~~----------~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eag------------------l---r- 128 (385)
T 4hwg_A 85 K----VDEVLEK----------EKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAG------------------N---R- 128 (385)
T ss_dssp H----HHHHHHH----------HCCSEEEEESCSGGGGGHHHHHHTTCCEEEESCC------------------C---C-
T ss_pred H----HHHHHHh----------cCCcEEEEECCchHHHHHHHHHHhCCCEEEEeCC------------------C---c-
Confidence 1 2222222 7899998743 3444578899999997654211 0 0
Q ss_pred CCCCcccCCCCCCCCCCCCCccccchhhhHHHHHHHHHHhccCccEEEEcChhHhhHHHHHHHHhhCC-CCccccCcCcc
Q 012543 170 SHDLEAPVPELPPLRMKDIPVIETLYQETLHQFAAEAINQMKASSGCIWNSVQELEQDSLAKFHREFP-IPSFPIGPFHK 248 (461)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~-~~~~~vG~~~~ 248 (461)
... ..++ . ...+.... ..++.++..+...-+. + ...-.+ .++..+|....
T Consensus 129 ------------s~~-~~~p----e--e~nR~~~~------~~a~~~~~~te~~~~~--l--~~~G~~~~~I~vtGnp~~ 179 (385)
T 4hwg_A 129 ------------CFD-QRVP----E--EINRKIID------HISDVNITLTEHARRY--L--IAEGLPAELTFKSGSHMP 179 (385)
T ss_dssp ------------CSC-TTST----H--HHHHHHHH------HHCSEEEESSHHHHHH--H--HHTTCCGGGEEECCCSHH
T ss_pred ------------ccc-ccCc----H--HHHHHHHH------hhhceeecCCHHHHHH--H--HHcCCCcCcEEEECCchH
Confidence 000 0000 0 00111111 1345566666543332 1 111111 23777885332
Q ss_pred CCCCCcCCCccCcchhhhhcCCCCCCeEEEEEccccccCC-HHHHHHHHHHHHhC----CCceEEEECCCccCCchhccc
Q 012543 249 YYPASASSLLSQDRICISRLDKQAPKSVIYVSFGSIAAID-ETKFLEVAWGLANS----KVPFLWVVRPGLVRGAEWIEL 323 (461)
Q Consensus 249 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~-~~~~~~~~~a~~~~----~~~~i~~~~~~~~~~~~~~~~ 323 (461)
.... ........+++.+.++-. +++.++++.|...... .+.+..+++++... +..+|+.....
T Consensus 180 D~~~-~~~~~~~~~~~~~~lgl~-~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~---------- 247 (385)
T 4hwg_A 180 EVLD-RFMPKILKSDILDKLSLT-PKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR---------- 247 (385)
T ss_dssp HHHH-HHHHHHHHCCHHHHTTCC-TTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH----------
T ss_pred HHHH-HhhhhcchhHHHHHcCCC-cCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH----------
Confidence 2110 000000112234444432 3678888887654322 24456666666543 45666554321
Q ss_pred CchhHHHH---h--cCCCceeeecCh---hhhhcCCCCCccccccCchHHHHHhhcCCccccCcccchhhhhHHHHHHhh
Q 012543 324 LPRGFLEM---L--DGRGHIVKWAPQ---QEVLAHPATGAFWTHCGWNSTLESMCEGVPMICQPCHGEQMVIARYVSDVW 395 (461)
Q Consensus 324 lp~~~~~~---~--~~~~~~~~~vp~---~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~l 395 (461)
+.+.+.+. . ..|+.+.+.+++ ..++..+++ +|+-.|. .+.||.+.|+|+|+++...+.+. .+ +.
T Consensus 248 ~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e---~v-~~- 319 (385)
T 4hwg_A 248 TKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE---GM-DA- 319 (385)
T ss_dssp HHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH---HH-HH-
T ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh---hh-hc-
Confidence 11111111 1 235566555544 468999999 9998875 46999999999999987554222 24 43
Q ss_pred hceeecCCccCHHHHHHHHHHHhcchh-HHHHHHHHHHHHHHH-HHHhhcCCChHHHHHHHHHHH
Q 012543 396 KVGLHLERKLERGEVERAIRRVMVDAE-GREMRNRAAILKEKL-DLCTKQGSSSYQSLENLISYI 458 (461)
Q Consensus 396 G~G~~l~~~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~l~~~~-~~~~~~~g~~~~~~~~l~~~l 458 (461)
|.++.+. .+.++|.+++.++++|++ ...+++++. .+ . +++++++.++.|.+++
T Consensus 320 G~~~lv~--~d~~~i~~ai~~ll~d~~~~~~m~~~~~----~~~g----~g~aa~rI~~~l~~~~ 374 (385)
T 4hwg_A 320 GTLIMSG--FKAERVLQAVKTITEEHDNNKRTQGLVP----DYNE----AGLVSKKILRIVLSYV 374 (385)
T ss_dssp TCCEECC--SSHHHHHHHHHHHHTTCBTTBCCSCCCH----HHHT----CCCHHHHHHHHHHHHH
T ss_pred CceEEcC--CCHHHHHHHHHHHHhChHHHHHhhccCC----CCCC----CChHHHHHHHHHHHHh
Confidence 8776664 489999999999999832 111111111 12 2 6677777766666554
No 40
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.89 E-value=6.3e-08 Score=101.61 Aligned_cols=171 Identities=12% Similarity=0.071 Sum_probs=94.3
Q ss_pred CCeEEEEEccccccCCHHHHHHHHHHHHhCC-----CceEEEECCCccCC--ch---hcccCchhHHH-HhcCCCceeee
Q 012543 273 PKSVIYVSFGSIAAIDETKFLEVAWGLANSK-----VPFLWVVRPGLVRG--AE---WIELLPRGFLE-MLDGRGHIVKW 341 (461)
Q Consensus 273 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~-----~~~i~~~~~~~~~~--~~---~~~~lp~~~~~-~~~~~~~~~~~ 341 (461)
++..+++..|.... ...+..+++|+.... .+++++..+..... .+ ....+-.-+.+ ...+++.+.++
T Consensus 570 ~~~~vIl~vGRl~~--~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~ 647 (816)
T 3s28_A 570 KKKPILFTMARLDR--VKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISS 647 (816)
T ss_dssp TTSCEEEEECCCCT--TTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECC
T ss_pred CCCeEEEEEccCcc--cCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccC
Confidence 34567777888764 344555666665542 34444433321000 00 00111111111 12356677764
Q ss_pred ----cChhhhhc----CCCCCccccc----cCchHHHHHhhcCCccccCcccchhhhhHHHHHHhhhceeecCCccCHHH
Q 012543 342 ----APQQEVLA----HPATGAFWTH----CGWNSTLESMCEGVPMICQPCHGEQMVIARYVSDVWKVGLHLERKLERGE 409 (461)
Q Consensus 342 ----vp~~~lL~----~~~~~~~I~H----GG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~ 409 (461)
+|..++.. .+++ +|.- |--.++.||+++|+|+|+. |.......+++. +.|..++. -+.++
T Consensus 648 ~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg-~~Gllv~p-~D~e~ 719 (816)
T 3s28_A 648 QMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHG-KSGFHIDP-YHGDQ 719 (816)
T ss_dssp CCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBT-TTBEEECT-TSHHH
T ss_pred ccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccC-CcEEEeCC-CCHHH
Confidence 44455444 4566 6632 3456899999999999986 444455666663 67877765 57899
Q ss_pred HHHHHHHHh----cchh-HHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHc
Q 012543 410 VERAIRRVM----VDAE-GREMRNRAAILKEKLDLCTKQGSSSYQSLENLISYILS 460 (461)
Q Consensus 410 l~~~i~~ll----~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~l~~ 460 (461)
+.++|.+++ +|++ ...+.+++++ .+.+.-+-+..++.+++.+++
T Consensus 720 LA~aI~~lL~~Ll~d~~~~~~m~~~ar~-------~a~~~fSwe~~a~~ll~lY~~ 768 (816)
T 3s28_A 720 AADTLADFFTKCKEDPSHWDEISKGGLQ-------RIEEKYTWQIYSQRLLTLTGV 768 (816)
T ss_dssp HHHHHHHHHHHHHHCTHHHHHHHHHHHH-------HHHHSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHH-------HHHHhCCHHHHHHHHHHHHHH
Confidence 999997776 6732 2233333333 222455666777777665543
No 41
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.74 E-value=1.7e-06 Score=84.49 Aligned_cols=166 Identities=12% Similarity=0.059 Sum_probs=95.5
Q ss_pred CeEEEEEccccccCCHHHHHHHHHHHHh-----CCCceEEEECCCccCCchhcccCchhHHH---H--hcCC-------C
Q 012543 274 KSVIYVSFGSIAAIDETKFLEVAWGLAN-----SKVPFLWVVRPGLVRGAEWIELLPRGFLE---M--LDGR-------G 336 (461)
Q Consensus 274 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~-----~~~~~i~~~~~~~~~~~~~~~~lp~~~~~---~--~~~~-------~ 336 (461)
+..+++..|.... ...+..+++++.. .+.+++++..+..... ..+.+.+.+ . ..++ +
T Consensus 183 ~~~~il~vGr~~~--~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~----~~l~~~~~~~~~~~~l~~~v~~l~~vv 256 (413)
T 3oy2_A 183 DDVLFLNMNRNTA--RKRLDIYVLAAARFISKYPDAKVRFLCNSHHESK----FDLHSIALRELVASGVDNVFTHLNKIM 256 (413)
T ss_dssp TSEEEECCSCSSG--GGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCS----CCHHHHHHHHHHHHTCSCHHHHHTTEE
T ss_pred CceEEEEcCCCch--hcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccch----hhHHHHHHHHHHHcCccccccccccee
Confidence 4677888888653 2334444444443 2566666554432111 001122211 1 1222 4
Q ss_pred ceeeecChhh---hhcCCCCCcccc----ccCchHHHHHhhcCCccccCcccchhhhhHHHHHHhhhc------------
Q 012543 337 HIVKWAPQQE---VLAHPATGAFWT----HCGWNSTLESMCEGVPMICQPCHGEQMVIARYVSDVWKV------------ 397 (461)
Q Consensus 337 ~~~~~vp~~~---lL~~~~~~~~I~----HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~------------ 397 (461)
.+.+|+|+.+ ++..+|+ +|. -|.-.++.||+++|+|+|+... ......+.+. ..
T Consensus 257 ~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~~~i~~~~~~~~~ 329 (413)
T 3oy2_A 257 INRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYFSGD-CVYKIKPSAWISVD 329 (413)
T ss_dssp EECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHSCTT-TSEEECCCEEEECT
T ss_pred eccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHHccC-cccccccccccccc
Confidence 4559998544 7888998 663 3345589999999999998653 3344444431 11
Q ss_pred ---ee--ecCCccCHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHc
Q 012543 398 ---GL--HLERKLERGEVERAIRRVMVDAEGREMRNRAAILKEKLDLCTKQGSSSYQSLENLISYILS 460 (461)
Q Consensus 398 ---G~--~l~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~l~~ 460 (461)
|. .+.. -+.+++.++| ++++| +..+ +++++..++...+.-+.++.++.+.+.+++
T Consensus 330 ~~~G~~gl~~~-~d~~~la~~i-~l~~~---~~~~---~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 389 (413)
T 3oy2_A 330 DRDGIGGIEGI-IDVDDLVEAF-TFFKD---EKNR---KEYGKRVQDFVKTKPTWDDISSDIIDFFNS 389 (413)
T ss_dssp TTCSSCCEEEE-CCHHHHHHHH-HHTTS---HHHH---HHHHHHHHHHHTTSCCHHHHHHHHHHHHHH
T ss_pred cccCcceeeCC-CCHHHHHHHH-HHhcC---HHHH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 44 4432 4899999999 99999 4433 233333333333566778888888777664
No 42
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.65 E-value=9.3e-07 Score=88.40 Aligned_cols=163 Identities=12% Similarity=0.006 Sum_probs=92.4
Q ss_pred eEEEEEcccccc-CCHHHHHHHHHHHHhCCCceEEEECCCccCCchhcccCchhHHHHhcCCCc-eeeecChh---hhhc
Q 012543 275 SVIYVSFGSIAA-IDETKFLEVAWGLANSKVPFLWVVRPGLVRGAEWIELLPRGFLEMLDGRGH-IVKWAPQQ---EVLA 349 (461)
Q Consensus 275 ~~v~vs~Gs~~~-~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~-~~~~vp~~---~lL~ 349 (461)
..+++..|.... ...+.+...+..+.+.+.+++++..+.... ...+.. ..+..++++. +.++ +.+ .++.
T Consensus 291 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~----~~~l~~-~~~~~~~~v~~~~g~-~~~~~~~~~~ 364 (485)
T 1rzu_A 291 SPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVAL----EGALLA-AASRHHGRVGVAIGY-NEPLSHLMQA 364 (485)
T ss_dssp SCEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHH----HHHHHH-HHHHTTTTEEEEESC-CHHHHHHHHH
T ss_pred CeEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCchHH----HHHHHH-HHHhCCCcEEEecCC-CHHHHHHHHh
Confidence 347777888764 222333332333333356655554332100 011111 1122235666 5677 443 4788
Q ss_pred CCCCCcccc----ccCchHHHHHhhcCCccccCcccchhhhhHHHHHHhh---------hceeecCCccCHHHHHHHHHH
Q 012543 350 HPATGAFWT----HCGWNSTLESMCEGVPMICQPCHGEQMVIARYVSDVW---------KVGLHLERKLERGEVERAIRR 416 (461)
Q Consensus 350 ~~~~~~~I~----HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~l---------G~G~~l~~~~~~~~l~~~i~~ 416 (461)
.+|+ +|. -|.-.++.||+++|+|+|+... ......+++ - +.|...+. -+.+++.++|.+
T Consensus 365 ~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~~-~d~~~la~~i~~ 436 (485)
T 1rzu_A 365 GCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVID-ANHAALASKAATGVQFSP-VTLDGLKQAIRR 436 (485)
T ss_dssp HCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEESS-CSHHHHHHHHHH
T ss_pred cCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecc-cccccccccCCcceEeCC-CCHHHHHHHHHH
Confidence 9998 663 2445689999999999999764 334444443 1 36766654 578999999999
Q ss_pred Hh---cchhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHc
Q 012543 417 VM---VDAEGREMRNRAAILKEKLDLCTKQGSSSYQSLENLISYILS 460 (461)
Q Consensus 417 ll---~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~l~~ 460 (461)
++ +| +..++ ++++..++ +.-+.++.++.+.+.+++
T Consensus 437 ll~~~~~---~~~~~---~~~~~~~~---~~fs~~~~~~~~~~~y~~ 474 (485)
T 1rzu_A 437 TVRYYHD---PKLWT---QMQKLGMK---SDVSWEKSAGLYAALYSQ 474 (485)
T ss_dssp HHHHHTC---HHHHH---HHHHHHHT---CCCBHHHHHHHHHHHHHH
T ss_pred HHHHhCC---HHHHH---HHHHHHHH---HhCChHHHHHHHHHHHHH
Confidence 99 67 43333 22222221 456677777777766654
No 43
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.59 E-value=3.1e-06 Score=84.57 Aligned_cols=163 Identities=12% Similarity=0.028 Sum_probs=92.8
Q ss_pred CeEEEEEccccccCCHHHHHHHHHHHHh---CCCceEEEECCCccCCchhcccCchhHHHHhcCCCc-eeeecChh--hh
Q 012543 274 KSVIYVSFGSIAAIDETKFLEVAWGLAN---SKVPFLWVVRPGLVRGAEWIELLPRGFLEMLDGRGH-IVKWAPQQ--EV 347 (461)
Q Consensus 274 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~---~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~-~~~~vp~~--~l 347 (461)
+..+++..|.... ...+..++++++. .+.+++++..+.... ...+.+ ..+..++++. +.++.... .+
T Consensus 291 ~~~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~----~~~l~~-~~~~~~~~v~~~~g~~~~~~~~~ 363 (485)
T 2qzs_A 291 KVPLFAVVSRLTS--QKGLDLVLEALPGLLEQGGQLALLGAGDPVL----QEGFLA-AAAEYPGQVGVQIGYHEAFSHRI 363 (485)
T ss_dssp TSCEEEEEEEESG--GGCHHHHHHHHHHHHHTTCEEEEEEEECHHH----HHHHHH-HHHHSTTTEEEEESCCHHHHHHH
T ss_pred CCeEEEEeccCcc--ccCHHHHHHHHHHHhhCCcEEEEEeCCchHH----HHHHHH-HHHhCCCcEEEeCCCCHHHHHHH
Confidence 4456677787653 2233344444433 356655554332100 011111 1112235665 56773332 47
Q ss_pred hcCCCCCccccc----cCchHHHHHhhcCCccccCcccchhhhhHHHHHHhh---------hceeecCCccCHHHHHHHH
Q 012543 348 LAHPATGAFWTH----CGWNSTLESMCEGVPMICQPCHGEQMVIARYVSDVW---------KVGLHLERKLERGEVERAI 414 (461)
Q Consensus 348 L~~~~~~~~I~H----GG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~l---------G~G~~l~~~~~~~~l~~~i 414 (461)
+..+|+ +|.- |.-.++.||+++|+|+|+... ......+++ - +.|...+. -+.+++.++|
T Consensus 364 ~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~~-~d~~~la~~i 435 (485)
T 2qzs_A 364 MGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSD-CSLENLADGVASGFVFED-SNAWSLLRAI 435 (485)
T ss_dssp HHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEECS-SSHHHHHHHH
T ss_pred HHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceecc-CccccccccccceEEECC-CCHHHHHHHH
Confidence 889998 6632 345688999999999998754 334444443 1 36766654 5889999999
Q ss_pred HHHh---cchhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHc
Q 012543 415 RRVM---VDAEGREMRNRAAILKEKLDLCTKQGSSSYQSLENLISYILS 460 (461)
Q Consensus 415 ~~ll---~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~l~~ 460 (461)
.+++ +| +..+++ +++..++ +.-+.++.++.+.+.+++
T Consensus 436 ~~ll~~~~~---~~~~~~---~~~~~~~---~~fs~~~~~~~~~~ly~~ 475 (485)
T 2qzs_A 436 RRAFVLWSR---PSLWRF---VQRQAMA---MDFSWQVAAKSYRELYYR 475 (485)
T ss_dssp HHHHHHHTS---HHHHHH---HHHHHHH---CCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCC---HHHHHH---HHHHHHh---hcCCHHHHHHHHHHHHHH
Confidence 9999 67 433332 2222221 556777777777777654
No 44
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.52 E-value=2e-07 Score=79.70 Aligned_cols=131 Identities=13% Similarity=0.093 Sum_probs=86.6
Q ss_pred EEEEEccccccCCHHHHHHHHHHHHhC-CCceEEEECCCccCCchhcccCchhHHHHhcCCCceeeecCh---hhhhcCC
Q 012543 276 VIYVSFGSIAAIDETKFLEVAWGLANS-KVPFLWVVRPGLVRGAEWIELLPRGFLEMLDGRGHIVKWAPQ---QEVLAHP 351 (461)
Q Consensus 276 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~---~~lL~~~ 351 (461)
.+++..|+... ...+..++++++.. +.+++++..+.... + +..+.........+|+.+.+|+++ ..++..+
T Consensus 24 ~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~G~~~~~~--~-l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~a 98 (177)
T 2f9f_A 24 DFWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIVGWFSKGD--H-AERYARKIMKIAPDNVKFLGSVSEEELIDLYSRC 98 (177)
T ss_dssp SCEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEEBCCCTTS--T-HHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHC
T ss_pred CEEEEEecccc--ccCHHHHHHHHHhCCCcEEEEEecCccHH--H-HHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhC
Confidence 45666787663 34566677777776 45655544332210 1 111111111234468889999998 4588899
Q ss_pred CCCcccc---ccC-chHHHHHhhcCCccccCcccchhhhhHHHHHHhhhceeecCCccCHHHHHHHHHHHhcc
Q 012543 352 ATGAFWT---HCG-WNSTLESMCEGVPMICQPCHGEQMVIARYVSDVWKVGLHLERKLERGEVERAIRRVMVD 420 (461)
Q Consensus 352 ~~~~~I~---HGG-~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~l~~~i~~ll~~ 420 (461)
++ +|. +.| ..++.||+++|+|+|+... ..+...+++. +.|..+ . -+.+++.++|.++++|
T Consensus 99 di--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~-~-~d~~~l~~~i~~l~~~ 162 (177)
T 2f9f_A 99 KG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINE-KTGYLV-N-ADVNEIIDAMKKVSKN 162 (177)
T ss_dssp SE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBT-TTEEEE-C-SCHHHHHHHHHHHHHC
T ss_pred CE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCC-CccEEe-C-CCHHHHHHHHHHHHhC
Confidence 98 665 334 4499999999999998753 4555666653 678777 3 6899999999999988
No 45
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.37 E-value=3.7e-05 Score=74.86 Aligned_cols=73 Identities=12% Similarity=0.013 Sum_probs=55.6
Q ss_pred CCCceeeecChhh---hhcCCCCCcccc---ccC-chHHHHHh-------hcCCccccCcccchhhhhHHHHHHhhhcee
Q 012543 334 GRGHIVKWAPQQE---VLAHPATGAFWT---HCG-WNSTLESM-------CEGVPMICQPCHGEQMVIARYVSDVWKVGL 399 (461)
Q Consensus 334 ~~~~~~~~vp~~~---lL~~~~~~~~I~---HGG-~gs~~eal-------~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~ 399 (461)
+|+.+.+++|+.+ ++..+|+ +|. +.| -+++.||+ ++|+|+|+... +.+. ..|.
T Consensus 265 ~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G~ 331 (406)
T 2hy7_A 265 DNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKSR 331 (406)
T ss_dssp TTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSSE
T ss_pred CCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cceE
Confidence 4558889998754 7888998 653 334 45789999 99999999755 5553 5576
Q ss_pred e-cCCccCHHHHHHHHHHHhcc
Q 012543 400 H-LERKLERGEVERAIRRVMVD 420 (461)
Q Consensus 400 ~-l~~~~~~~~l~~~i~~ll~~ 420 (461)
. +.. -+.+++.++|.++++|
T Consensus 332 l~v~~-~d~~~la~ai~~ll~~ 352 (406)
T 2hy7_A 332 FGYTP-GNADSVIAAITQALEA 352 (406)
T ss_dssp EEECT-TCHHHHHHHHHHHHHC
T ss_pred EEeCC-CCHHHHHHHHHHHHhC
Confidence 6 554 5889999999999988
No 46
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.22 E-value=8.8e-05 Score=71.31 Aligned_cols=96 Identities=14% Similarity=0.187 Sum_probs=67.9
Q ss_pred CceeeecCh-hhhhcCCCCCccccc-----cCchHHHHHhhcCCccccCcccchhhhhHHHHHHhhhceeecCCccCHHH
Q 012543 336 GHIVKWAPQ-QEVLAHPATGAFWTH-----CGWNSTLESMCEGVPMICQPCHGEQMVIARYVSDVWKVGLHLERKLERGE 409 (461)
Q Consensus 336 ~~~~~~vp~-~~lL~~~~~~~~I~H-----GG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~ 409 (461)
+.+.++... ..++..+|+ ++.- +|..++.||+++|+|+|+-|..++.+.....+.+. |.++.. -+.++
T Consensus 262 v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~---~d~~~ 335 (374)
T 2xci_A 262 VILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEV---KNETE 335 (374)
T ss_dssp EEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEEC---CSHHH
T ss_pred EEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEe---CCHHH
Confidence 344454443 448888887 5531 23478999999999999877666666666655553 777655 26799
Q ss_pred HHHHHHHHhcchh-HHHHHHHHHHHHHHHH
Q 012543 410 VERAIRRVMVDAE-GREMRNRAAILKEKLD 438 (461)
Q Consensus 410 l~~~i~~ll~~~~-~~~~~~~a~~l~~~~~ 438 (461)
|.++|.++++| + ...+.+++++..+.-.
T Consensus 336 La~ai~~ll~d-~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 336 LVTKLTELLSV-KKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp HHHHHHHHHHS-CCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhH-HHHHHHHHHHHHHHHhcc
Confidence 99999999988 6 5678888887766544
No 47
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=98.18 E-value=0.00023 Score=71.77 Aligned_cols=167 Identities=16% Similarity=0.149 Sum_probs=90.5
Q ss_pred CeEEEEEccccccCCHHHHHHHHHHHH---hCCCceEEEECCCccCCchhcccCchhHHHHhcCCCceeeecChh---hh
Q 012543 274 KSVIYVSFGSIAAIDETKFLEVAWGLA---NSKVPFLWVVRPGLVRGAEWIELLPRGFLEMLDGRGHIVKWAPQQ---EV 347 (461)
Q Consensus 274 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~---~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~---~l 347 (461)
+..+++..|.... ...+..+++|+. +.+.+++++..++.. ....-.......+.++.+....+.. .+
T Consensus 326 ~~p~i~~vgRl~~--~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 398 (536)
T 3vue_A 326 KIPLIAFIGRLEE--QKGPDVMAAAIPELMQEDVQIVLLGTGKKK-----FEKLLKSMEEKYPGKVRAVVKFNAPLAHLI 398 (536)
T ss_dssp TSCEEEEECCBSG--GGCHHHHHHHHHHHTTSSCEEEEECCBCHH-----HHHHHHHHHHHSTTTEEEECSCCHHHHHHH
T ss_pred CCcEEEEEeeccc--cCChHHHHHHHHHhHhhCCeEEEEeccCch-----HHHHHHHHHhhcCCceEEEEeccHHHHHHH
Confidence 4456666787664 233444555544 345566555443310 1111112223345666777666664 37
Q ss_pred hcCCCCCccccc---cCc-hHHHHHhhcCCccccCcccchhhhhHHHHHHhhhceeecCC---------ccCHHHHHHHH
Q 012543 348 LAHPATGAFWTH---CGW-NSTLESMCEGVPMICQPCHGEQMVIARYVSDVWKVGLHLER---------KLERGEVERAI 414 (461)
Q Consensus 348 L~~~~~~~~I~H---GG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~l~~---------~~~~~~l~~~i 414 (461)
+..+|+ ||.- =|. .+++|||++|+|+|+.... .....|.+. .-|..... ..+.+.|.++|
T Consensus 399 ~~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~g----G~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~ai 471 (536)
T 3vue_A 399 MAGADV--LAVPSRFEPCGLIQLQGMRYGTPCACASTG----GLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAATL 471 (536)
T ss_dssp HHHCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSCT----HHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHHH
T ss_pred HHhhhe--eecccccCCCCHHHHHHHHcCCCEEEcCCC----CchheeeCC-CCccccccCCCceeEECCCCHHHHHHHH
Confidence 888888 7643 233 3889999999999987543 344445442 33432211 24678999999
Q ss_pred HHHhcchhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHcC
Q 012543 415 RRVMVDAEGREMRNRAAILKEKLDLCTKQGSSSYQSLENLISYILSY 461 (461)
Q Consensus 415 ~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~l~~~ 461 (461)
+++++..+.+.+++ ..+.++.+.-|=++.+++-.+.+++|
T Consensus 472 ~ral~~~~~~~~~~-------~~~~am~~~fSW~~~A~~y~~ly~~L 511 (536)
T 3vue_A 472 KRAIKVVGTPAYEE-------MVRNCMNQDLSWKGPAKNWENVLLGL 511 (536)
T ss_dssp HHHHHHTTSHHHHH-------HHHHHHHSCCSSHHHHHHHHHHHHTT
T ss_pred HHHHHhcCcHHHHH-------HHHHHHHhcCCHHHHHHHHHHHHHHh
Confidence 98875211133332 22223335555566666666655543
No 48
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.97 E-value=0.00019 Score=72.99 Aligned_cols=116 Identities=9% Similarity=0.055 Sum_probs=77.0
Q ss_pred CCCceeeecChh---hhhcCCCCCcccc---ccCchHHHHHhhcCCccccCcccchhhh-hHHHHHHhhhceeecCCccC
Q 012543 334 GRGHIVKWAPQQ---EVLAHPATGAFWT---HCGWNSTLESMCEGVPMICQPCHGEQMV-IARYVSDVWKVGLHLERKLE 406 (461)
Q Consensus 334 ~~~~~~~~vp~~---~lL~~~~~~~~I~---HGG~gs~~eal~~GvP~l~~P~~~DQ~~-na~~v~~~lG~G~~l~~~~~ 406 (461)
+++.+.+++|+. .++..+|+ ||. .|+-.++.||+++|+|+|+.|...=..+ -+..+.. .|+...+.. +
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~-~g~~e~v~~--~ 508 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHH-LGLDEMNVA--D 508 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHH-HTCGGGBCS--S
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHH-CCChhhhcC--C
Confidence 567888999854 46888998 652 2667799999999999999774311111 2345555 477665543 8
Q ss_pred HHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHh--hcCCChHHHHHHHHHHHHc
Q 012543 407 RGEVERAIRRVMVDAEGREMRNRAAILKEKLDLCT--KQGSSSYQSLENLISYILS 460 (461)
Q Consensus 407 ~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~--~~~g~~~~~~~~l~~~l~~ 460 (461)
.+++.+++.++++| +..++ ++++..++.. .+.-+.++.++.+.+.+++
T Consensus 509 ~~~la~~i~~l~~~---~~~~~---~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~ 558 (568)
T 2vsy_A 509 DAAFVAKAVALASD---PAALT---ALHARVDVLRRASGVFHMDGFADDFGALLQA 558 (568)
T ss_dssp HHHHHHHHHHHHHC---HHHHH---HHHHHHHHHHHHSSTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC---HHHHH---HHHHHHHHhhhcCCCCCHHHHHHHHHHHHHH
Confidence 89999999999999 44333 2333333222 2556677777777766654
No 49
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.95 E-value=3.2e-05 Score=64.89 Aligned_cols=145 Identities=14% Similarity=0.137 Sum_probs=83.9
Q ss_pred eEEEEEccccccCCHHHHHHHHHHHHhCCC--ce-EEEECCCccCCchhcccCchhHHHHhcCCCceeeecChhh---hh
Q 012543 275 SVIYVSFGSIAAIDETKFLEVAWGLANSKV--PF-LWVVRPGLVRGAEWIELLPRGFLEMLDGRGHIVKWAPQQE---VL 348 (461)
Q Consensus 275 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~--~~-i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~~---lL 348 (461)
+++++..|+... ...+..+++++..+.. ++ +++++.+.. ...+.. ..+..+.++.+ +|+|+.+ ++
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~-----~~~~~~-~~~~~~~~v~~-g~~~~~~~~~~~ 72 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGKGPD-----EKKIKL-LAQKLGVKAEF-GFVNSNELLEIL 72 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECCSTT-----HHHHHH-HHHHHTCEEEC-CCCCHHHHHHHH
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeCCcc-----HHHHHH-HHHHcCCeEEE-eecCHHHHHHHH
Confidence 567788888763 3445667777776531 22 233333210 111111 11222336677 9998754 78
Q ss_pred cCCCCCcccc----ccCchHHHHHhhcCC-ccccCcccchhhhhHHHHHHhhhceeecCCccCHHHHHHHHHHHhcchh-
Q 012543 349 AHPATGAFWT----HCGWNSTLESMCEGV-PMICQPCHGEQMVIARYVSDVWKVGLHLERKLERGEVERAIRRVMVDAE- 422 (461)
Q Consensus 349 ~~~~~~~~I~----HGG~gs~~eal~~Gv-P~l~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~l~~~i~~ll~~~~- 422 (461)
..+|+ +|. -|.-.++.||+++|+ |+|+....+. ....+.+. +. .+. .-+.+++.++|.++++|++
T Consensus 73 ~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~---~~~~~~~~-~~--~~~-~~~~~~l~~~i~~l~~~~~~ 143 (166)
T 3qhp_A 73 KTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLSA---TRQFALDE-RS--LFE-PNNAKDLSAKIDWWLENKLE 143 (166)
T ss_dssp TTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTCG---GGGGCSSG-GG--EEC-TTCHHHHHHHHHHHHHCHHH
T ss_pred HhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCCc---hhhhccCC-ce--EEc-CCCHHHHHHHHHHHHhCHHH
Confidence 88998 664 344569999999996 9999432211 11222221 32 222 3589999999999999843
Q ss_pred HHHHHHHHHHHHHHH
Q 012543 423 GREMRNRAAILKEKL 437 (461)
Q Consensus 423 ~~~~~~~a~~l~~~~ 437 (461)
...+.+++++..+.+
T Consensus 144 ~~~~~~~~~~~~~~~ 158 (166)
T 3qhp_A 144 RERMQNEYAKSALNY 158 (166)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHC
Confidence 344556666555443
No 50
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.94 E-value=0.00023 Score=74.42 Aligned_cols=175 Identities=17% Similarity=0.132 Sum_probs=112.2
Q ss_pred CCCeEEEEEccccccCCHHHHHHHHHHHHhCCCceEEEECCCccCCchhcccCchhHHHH--hcCCCceeeecChhh---
Q 012543 272 APKSVIYVSFGSIAAIDETKFLEVAWGLANSKVPFLWVVRPGLVRGAEWIELLPRGFLEM--LDGRGHIVKWAPQQE--- 346 (461)
Q Consensus 272 ~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~--~~~~~~~~~~vp~~~--- 346 (461)
+.+.++|.+|.+....+++.+...++.|++.+--++|........ ...+-..+.+. ..+|+++.+..|..+
T Consensus 520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~----~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~ 595 (723)
T 4gyw_A 520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVG----EPNIQQYAQNMGLPQNRIIFSPVAPKEEHVR 595 (723)
T ss_dssp CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGG----HHHHHHHHHHTTCCGGGEEEEECCCHHHHHH
T ss_pred CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHH----HHHHHHHHHhcCCCcCeEEECCCCCHHHHHH
Confidence 457799999998888999999999999999988888887654311 01111111110 135667778888755
Q ss_pred hhcCCCCCcccc---ccCchHHHHHhhcCCccccCcccchh-hhhHHHHHHhhhceeecCCccCHHHHHHHHHHHhcchh
Q 012543 347 VLAHPATGAFWT---HCGWNSTLESMCEGVPMICQPCHGEQ-MVIARYVSDVWKVGLHLERKLERGEVERAIRRVMVDAE 422 (461)
Q Consensus 347 lL~~~~~~~~I~---HGG~gs~~eal~~GvP~l~~P~~~DQ-~~na~~v~~~lG~G~~l~~~~~~~~l~~~i~~ll~~~~ 422 (461)
.+..+|+ ++- .+|.+|++|||..|||+|.++-..=- ..-+..+.. +|+...+. .+.++-.+.--++-+|
T Consensus 596 ~~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~-~gl~e~ia--~~~~~Y~~~a~~la~d-- 668 (723)
T 4gyw_A 596 RGQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTC-LGCLELIA--KNRQEYEDIAVKLGTD-- 668 (723)
T ss_dssp HGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHH-HTCGGGBC--SSHHHHHHHHHHHHHC--
T ss_pred HhCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHH-cCCccccc--CCHHHHHHHHHHHhcC--
Confidence 4455666 654 78999999999999999999843222 223345555 57765553 4777777777777778
Q ss_pred HHHHHHHH-HHHHHHHHHHhhcCCChHHHHHHHHHHHHc
Q 012543 423 GREMRNRA-AILKEKLDLCTKQGSSSYQSLENLISYILS 460 (461)
Q Consensus 423 ~~~~~~~a-~~l~~~~~~~~~~~g~~~~~~~~l~~~l~~ 460 (461)
....+.. ++|++.+.. ...-...+.+.+|.+.+++
T Consensus 669 -~~~l~~lr~~l~~~~~~--s~l~d~~~~~~~le~a~~~ 704 (723)
T 4gyw_A 669 -LEYLKKVRGKVWKQRIS--SPLFNTKQYTMELERLYLQ 704 (723)
T ss_dssp -HHHHHHHHHHHHHHHHH--SSTTCHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHh--CcCcCHHHHHHHHHHHHHH
Confidence 3322222 233333321 1244567777777776664
No 51
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.74 E-value=0.0003 Score=60.77 Aligned_cols=78 Identities=15% Similarity=0.164 Sum_probs=58.7
Q ss_pred CCce-eeecChh---hhhcCCCCCccccc----cCchHHHHHhhcCCccccCcccchhhhhHHHHHHhhhceeecCCccC
Q 012543 335 RGHI-VKWAPQQ---EVLAHPATGAFWTH----CGWNSTLESMCEGVPMICQPCHGEQMVIARYVSDVWKVGLHLERKLE 406 (461)
Q Consensus 335 ~~~~-~~~vp~~---~lL~~~~~~~~I~H----GG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~ 406 (461)
++.+ .+++++. .++..+++ +|.- |...++.||+++|+|+|+... ......+ .. +.|...+. -+
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~-~~g~~~~~-~~ 166 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVKA-GD 166 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CT-TTCEEECT-TC
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-CC-CceEEecC-CC
Confidence 7788 8999854 47889998 6643 235689999999999988754 3444455 43 67777664 58
Q ss_pred HHHHHHHHHHHhc-ch
Q 012543 407 RGEVERAIRRVMV-DA 421 (461)
Q Consensus 407 ~~~l~~~i~~ll~-~~ 421 (461)
.+++.++|.++++ |+
T Consensus 167 ~~~l~~~i~~l~~~~~ 182 (200)
T 2bfw_A 167 PGELANAILKALELSR 182 (200)
T ss_dssp HHHHHHHHHHHHHCCH
T ss_pred HHHHHHHHHHHHhcCH
Confidence 8999999999999 83
No 52
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.63 E-value=0.00012 Score=69.20 Aligned_cols=111 Identities=16% Similarity=0.247 Sum_probs=83.3
Q ss_pred CCceeeecChhhh---hcCCCCCccccccCc---------hHHHHHhhcCCccccCcccchhhhhHHHHHHhhhceeecC
Q 012543 335 RGHIVKWAPQQEV---LAHPATGAFWTHCGW---------NSTLESMCEGVPMICQPCHGEQMVIARYVSDVWKVGLHLE 402 (461)
Q Consensus 335 ~~~~~~~vp~~~l---L~~~~~~~~I~HGG~---------gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~l~ 402 (461)
|+.+.+|+|+.++ |..++.+++.+-+.. +-+.|+|++|+|+|+. +...++..+++. |+|...+
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~----~~~~~~~~v~~~-~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQ----EGIANQELIENN-GLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEE----TTCTTTHHHHHH-TCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEc----cChhHHHHHHhC-CeEEEeC
Confidence 5588999999775 555566556544433 3578999999999974 456788889996 9999886
Q ss_pred CccCHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012543 403 RKLERGEVERAIRRVMVDAEGREMRNRAAILKEKLDLCTKQGSSSYQSLENLISYI 458 (461)
Q Consensus 403 ~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~l 458 (461)
+.+++.+++.++..+ +...+++|+++.+++++ .+.-..+++.+.+..|
T Consensus 290 ---~~~e~~~~i~~l~~~-~~~~m~~na~~~a~~~~----~~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 290 ---DVEEAIMKVKNVNED-EYIELVKNVRSFNPILR----KGFFTRRLLTESVFQA 337 (339)
T ss_dssp ---SHHHHHHHHHHCCHH-HHHHHHHHHHHHTHHHH----TTHHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHHh
Confidence 467888888886533 35789999999999988 6777777777666543
No 53
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.56 E-value=0.00073 Score=67.93 Aligned_cols=138 Identities=9% Similarity=0.010 Sum_probs=90.9
Q ss_pred CeEEEEEccccccCCHHHHHHHHHHHHhCCCceEEEE--CCCccCCchhcccCchhH-HHHhcCCCceeeecChhh---h
Q 012543 274 KSVIYVSFGSIAAIDETKFLEVAWGLANSKVPFLWVV--RPGLVRGAEWIELLPRGF-LEMLDGRGHIVKWAPQQE---V 347 (461)
Q Consensus 274 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~--~~~~~~~~~~~~~lp~~~-~~~~~~~~~~~~~vp~~~---l 347 (461)
..++|.+|+......++.+....+.+++.+..++|.. +...... ..+-..+ ..-..+++.+.+.+|..+ .
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~----~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~ 515 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGIT----HPYVERFIKSYLGDSATAHPHSPYHQYLRI 515 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGG----HHHHHHHHHHHHGGGEEEECCCCHHHHHHH
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhh----HHHHHHHHHcCCCccEEEcCCCCHHHHHHH
Confidence 4789999998888889999998888988877777643 3221000 0011111 112345677788888765 4
Q ss_pred hcCCCCCccc---cccCchHHHHHhhcCCccccCcccchhhhh-HHHHHHhhhceee-cCCccCHHHHHHHHHHHhcc
Q 012543 348 LAHPATGAFW---THCGWNSTLESMCEGVPMICQPCHGEQMVI-ARYVSDVWKVGLH-LERKLERGEVERAIRRVMVD 420 (461)
Q Consensus 348 L~~~~~~~~I---~HGG~gs~~eal~~GvP~l~~P~~~DQ~~n-a~~v~~~lG~G~~-l~~~~~~~~l~~~i~~ll~~ 420 (461)
+..+|+ ++ ..+|..|++|||++|||+|..+-..=--.. +..+.. +|+... +. -+.++..+...++.+|
T Consensus 516 y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~-~GLpE~LIA--~d~eeYv~~Av~La~D 588 (631)
T 3q3e_A 516 LHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKR-LGLPEWLIA--NTVDEYVERAVRLAEN 588 (631)
T ss_dssp HHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHH-TTCCGGGEE--SSHHHHHHHHHHHHHC
T ss_pred HhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHh-cCCCcceec--CCHHHHHHHHHHHhCC
Confidence 477887 54 337889999999999999998743211122 233444 466543 32 4788899899999999
No 54
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.44 E-value=0.0023 Score=60.58 Aligned_cols=103 Identities=12% Similarity=0.050 Sum_probs=64.2
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCCCCCCCCCCCc-eEEEcCCCCCCCcCCcccHHHHHHHHHH
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSK--GFSITIIHTKFNSPNPSNYPHF-TFCSIQDGLSETEASTTDFVALISVLHV 91 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~r--Gh~V~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (461)
|||+++.....|++.-..++.++|+++ |.+|++++.+.........+.+ +++.++.. . .. .
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~p~i~~v~~~~~~--~-------~~---~---- 64 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMPLG--H-------GA---L---- 64 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTCTTEEEEEEC-----------------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCCccCEEEEecCC--c-------cc---c----
Confidence 589999988999999999999999987 9999999986333222223444 34444311 0 00 0
Q ss_pred HcchhHHHHHHHHhhcccccCCCCccEEEeCCCchhhHHHHHHcCCCeEE
Q 012543 92 KCAAPFQDCLAKLLSNAEEKEEEPIACLITDASWFFTHDVAESLKLPRIV 141 (461)
Q Consensus 92 ~~~~~~~~~~~~l~~~~~~~~~~~pDlvi~D~~~~~a~~~A~~lgiP~v~ 141 (461)
....+.+..+.+.+ .++|++|.=....-...++...|+|..+
T Consensus 65 -~~~~~~~l~~~l~~-------~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 65 -EIGERRKLGHSLRE-------KRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp -CHHHHHHHHHHTTT-------TTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred -chHHHHHHHHHHHh-------cCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 00112233444444 7899999322334456778888999744
No 55
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.37 E-value=0.0034 Score=59.53 Aligned_cols=104 Identities=13% Similarity=0.048 Sum_probs=71.2
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCCCCCCCCCCCce-EEEcCCCCCCCcCCcccHHHHHHHHH
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSK--GFSITIIHTKFNSPNPSNYPHFT-FCSIQDGLSETEASTTDFVALISVLH 90 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~r--Gh~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (461)
.+||+++-..+.|++.-+.++.+.|+++ +.+|++++.+.........++++ ++.++.. .......
T Consensus 8 ~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~p~vd~vi~~~~~---------~~~~~~~--- 75 (349)
T 3tov_A 8 YKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYNPNIDELIVVDKK---------GRHNSIS--- 75 (349)
T ss_dssp TCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSCTTCSEEEEECCS---------SHHHHHH---
T ss_pred CCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCCCccEEEEeCcc---------cccccHH---
Confidence 5699999999999999999999999998 99999999975555444445664 5555421 0111111
Q ss_pred HHcchhHHHHHHHHhhcccccCCCCc-cEEEeCCCchhhHHHHHHcCCCeEE
Q 012543 91 VKCAAPFQDCLAKLLSNAEEKEEEPI-ACLITDASWFFTHDVAESLKLPRIV 141 (461)
Q Consensus 91 ~~~~~~~~~~~~~l~~~~~~~~~~~p-Dlvi~D~~~~~a~~~A~~lgiP~v~ 141 (461)
.+...+..+.+ .++ |++|.=....-...++...|+|..+
T Consensus 76 -----~~~~l~~~Lr~-------~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 76 -----GLNEVAREINA-------KGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp -----HHHHHHHHHHH-------HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred -----HHHHHHHHHhh-------CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 11233445554 678 9999655555566788888999755
No 56
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=95.80 E-value=0.072 Score=49.63 Aligned_cols=130 Identities=15% Similarity=0.049 Sum_probs=74.4
Q ss_pred CCeEEEEEcccccc---CCHHHHHHHHHHHHhCCCceEEEECCCccCCchhcccCchhHHHHhcCCCceeee--cCh-hh
Q 012543 273 PKSVIYVSFGSIAA---IDETKFLEVAWGLANSKVPFLWVVRPGLVRGAEWIELLPRGFLEMLDGRGHIVKW--APQ-QE 346 (461)
Q Consensus 273 ~~~~v~vs~Gs~~~---~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~--vp~-~~ 346 (461)
+++.|.+..|+... .+.+.+.++++.+.+.++++++..++.. ...+-+.+.+.. .++.+.+- +.+ .+
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~------e~~~~~~i~~~~-~~~~l~g~~sl~el~a 249 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPH------EEERAKRLAEGF-AYVEVLPKMSLEGVAR 249 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHH------HHHHHHHHHTTC-TTEEECCCCCHHHHHH
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHH------HHHHHHHHHhhC-CcccccCCCCHHHHHH
Confidence 46788888887653 6677788888888766777655433321 011111121111 12222222 223 45
Q ss_pred hhcCCCCCccccc-cCchHHHHHhhcCCccccC--cccchhhhhHHHHHHhhhce-ee-----cCC-ccCHHHHHHHHHH
Q 012543 347 VLAHPATGAFWTH-CGWNSTLESMCEGVPMICQ--PCHGEQMVIARYVSDVWKVG-LH-----LER-KLERGEVERAIRR 416 (461)
Q Consensus 347 lL~~~~~~~~I~H-GG~gs~~eal~~GvP~l~~--P~~~DQ~~na~~v~~~lG~G-~~-----l~~-~~~~~~l~~~i~~ 416 (461)
++.++++ +|+. .|. ++=|.+.|+|+|++ |..... ++ = +|-. .. -.. .++++++.+++.+
T Consensus 250 li~~a~l--~I~~DSG~--~HlAaa~g~P~v~lfg~t~p~~--~~----P-~~~~~~~~~~~~~cm~~I~~~~V~~~i~~ 318 (326)
T 2gt1_A 250 VLAGAKF--VVSVDTGL--SHLTAALDRPNITVYGPTDPGL--IG----G-YGKNQMVCRAPGNELSQLTANAVKQFIEE 318 (326)
T ss_dssp HHHTCSE--EEEESSHH--HHHHHHTTCCEEEEESSSCHHH--HC----C-CSSSEEEEECGGGCGGGCCHHHHHHHHHH
T ss_pred HHHhCCE--EEecCCcH--HHHHHHcCCCEEEEECCCChhh--cC----C-CCCCceEecCCcccccCCCHHHHHHHHHH
Confidence 8999998 9988 544 44466699999988 432221 10 0 1111 01 112 6899999999999
Q ss_pred Hhcc
Q 012543 417 VMVD 420 (461)
Q Consensus 417 ll~~ 420 (461)
++++
T Consensus 319 ~l~~ 322 (326)
T 2gt1_A 319 NAEK 322 (326)
T ss_dssp TTTT
T ss_pred HHHH
Confidence 9976
No 57
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=95.37 E-value=0.0093 Score=57.87 Aligned_cols=83 Identities=11% Similarity=-0.005 Sum_probs=56.3
Q ss_pred CCceeeecChhh---hhcCCCCCcccccc---Cc-hHHHHHhhcCCccccCcccchhhhhHHHHHHhhhceeecCCccCH
Q 012543 335 RGHIVKWAPQQE---VLAHPATGAFWTHC---GW-NSTLESMCEGVPMICQPCHGEQMVIARYVSDVWKVGLHLERKLER 407 (461)
Q Consensus 335 ~~~~~~~vp~~~---lL~~~~~~~~I~HG---G~-gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~ 407 (461)
++.+.+++|+.+ ++..+|+ ||.-. |. .++.|||++|+|+|+ -..+ ....+++. ..|..++. -++
T Consensus 296 ~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv~~-~d~ 366 (413)
T 2x0d_A 296 HLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWH-SNIVSLEQ-LNP 366 (413)
T ss_dssp EEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTB-TTEEEESS-CSH
T ss_pred cEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcC-CCEEEeCC-CCH
Confidence 457889998765 7888998 66422 33 467999999999998 3222 12344542 46776665 688
Q ss_pred HHHHHHHHHHhcchhHHHHHHH
Q 012543 408 GEVERAIRRVMVDAEGREMRNR 429 (461)
Q Consensus 408 ~~l~~~i~~ll~~~~~~~~~~~ 429 (461)
+++.++|.++++| +..+++
T Consensus 367 ~~la~ai~~ll~~---~~~~~~ 385 (413)
T 2x0d_A 367 ENIAETLVELCMS---FNNRDV 385 (413)
T ss_dssp HHHHHHHHHHHHH---TC----
T ss_pred HHHHHHHHHHHcC---HHHHHH
Confidence 9999999999998 444444
No 58
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=93.45 E-value=0.24 Score=43.87 Aligned_cols=44 Identities=16% Similarity=0.015 Sum_probs=29.3
Q ss_pred ccCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCC
Q 012543 10 QQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSP 55 (461)
Q Consensus 10 ~~~~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~~ 55 (461)
..+++||||+.-=-+. |---+.+|++.|++ +|+|+++.+..+.+
T Consensus 7 ~~~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~S 50 (261)
T 3ty2_A 7 TATPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRS 50 (261)
T ss_dssp ----CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCT
T ss_pred ccCCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCc
Confidence 3446789888764333 44456788899977 89999999975543
No 59
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=92.57 E-value=0.37 Score=47.52 Aligned_cols=105 Identities=15% Similarity=0.107 Sum_probs=64.7
Q ss_pred eeecChhh---hhcCCCCCcccc---ccCch-HHHHHhhcCC-----ccccCcccchhhhhHHHHHHhhhceeecCCccC
Q 012543 339 VKWAPQQE---VLAHPATGAFWT---HCGWN-STLESMCEGV-----PMICQPCHGEQMVIARYVSDVWKVGLHLERKLE 406 (461)
Q Consensus 339 ~~~vp~~~---lL~~~~~~~~I~---HGG~g-s~~eal~~Gv-----P~l~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~ 406 (461)
.+++++.+ ++..+|+ ||. .=|.| ++.||+++|+ |+|+--+.+--+. +.-|..++. .+
T Consensus 337 ~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~--------l~~g~lv~p-~d 405 (482)
T 1uqt_A 337 NQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANE--------LTSALIVNP-YD 405 (482)
T ss_dssp CSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGT--------CTTSEEECT-TC
T ss_pred CCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHH--------hCCeEEECC-CC
Confidence 47778765 6778888 664 33554 8999999998 6666543321111 112444554 57
Q ss_pred HHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHc
Q 012543 407 RGEVERAIRRVMVDAEGREMRNRAAILKEKLDLCTKQGSSSYQSLENLISYILS 460 (461)
Q Consensus 407 ~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~l~~ 460 (461)
.+++.++|.++|++++ ..-+++.++..+.++ + -+..+.++.+++.|++
T Consensus 406 ~~~lA~ai~~lL~~~~-~~r~~~~~~~~~~v~----~-~s~~~~a~~~l~~l~~ 453 (482)
T 1uqt_A 406 RDEVAAALDRALTMSL-AERISRHAEMLDVIV----K-NDINHWQECFISDLKQ 453 (482)
T ss_dssp HHHHHHHHHHHHTCCH-HHHHHHHHHHHHHHH----H-TCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHH----h-CCHHHHHHHHHHHHHh
Confidence 8999999999998521 112333333333333 3 4677788888877764
No 60
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=91.05 E-value=2.1 Score=42.08 Aligned_cols=109 Identities=14% Similarity=0.055 Sum_probs=69.6
Q ss_pred CCceeeecChhh---hhcCCCCCcccc---ccCch-HHHHHhhcC---CccccCcccchhhhhHHHHHHhhhceeecCCc
Q 012543 335 RGHIVKWAPQQE---VLAHPATGAFWT---HCGWN-STLESMCEG---VPMICQPCHGEQMVIARYVSDVWKVGLHLERK 404 (461)
Q Consensus 335 ~~~~~~~vp~~~---lL~~~~~~~~I~---HGG~g-s~~eal~~G---vP~l~~P~~~DQ~~na~~v~~~lG~G~~l~~~ 404 (461)
.+++...+|+.+ ++..+|+ ++. .=|.| +..|++++| .|+|+--+.+ .+..+. .-|+.+++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~---~~allVnP- 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLG---EYCRSVNP- 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHG---GGSEEECT-
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhC---CCEEEECC-
Confidence 456667788754 6677888 553 45777 568999996 5655543322 222221 13666665
Q ss_pred cCHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHH
Q 012543 405 LERGEVERAIRRVMVDAEGREMRNRAAILKEKLDLCTKQGSSSYQSLENLISYIL 459 (461)
Q Consensus 405 ~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~l~ 459 (461)
.+.+++.++|.++|++++ ..-+++.+++.+.++ .....+-++.+++.|+
T Consensus 423 ~D~~~lA~AI~~aL~m~~-~er~~r~~~~~~~V~-----~~d~~~W~~~fl~~L~ 471 (496)
T 3t5t_A 423 FDLVEQAEAISAALAAGP-RQRAEAAARRRDAAR-----PWTLEAWVQAQLDGLA 471 (496)
T ss_dssp TBHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHT-----TCBHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHh
Confidence 689999999999998732 233444555555543 4566777777777765
No 61
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=89.65 E-value=4.1 Score=35.86 Aligned_cols=110 Identities=10% Similarity=0.073 Sum_probs=60.6
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCC----CCCCceEEEcCCCCCCCcCCcccHHHHHHHHH
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSPNPS----NYPHFTFCSIQDGLSETEASTTDFVALISVLH 90 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (461)
||||+.-=-+. |---+.+|+++|++.| +|+++.+..+.+... -..-+++..+..+.. ..-...+..-.....
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~sit~~~pl~~~~~~~~~~--~~v~GTPaDCV~lal 77 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDTDFY--TVIDGTPADCVHLGY 77 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCCCSSCEEEEEEETTEE--EETTCCHHHHHHHHH
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCccceecCCCeEEEEecCCCe--EEECCCHHHHHHHHH
Confidence 57777654333 3445678899999988 999999975543322 112344444433210 111223322222221
Q ss_pred HHcchhHHHHHHHHhhcccccCCCCccEEEeC----------CCc---hhhHHHHHHcCCCeEEEecc
Q 012543 91 VKCAAPFQDCLAKLLSNAEEKEEEPIACLITD----------ASW---FFTHDVAESLKLPRIVLRSL 145 (461)
Q Consensus 91 ~~~~~~~~~~~~~l~~~~~~~~~~~pDlvi~D----------~~~---~~a~~~A~~lgiP~v~~~~~ 145 (461)
..+... .+||+||+- .++ .+|+.-|..+|||.|.++..
T Consensus 78 -----------~~l~~~------~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (251)
T 2phj_A 78 -----------RVILEE------KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp -----------HTTTTT------CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -----------HHhcCC------CCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEcC
Confidence 122211 579999963 222 33455677889999998753
No 62
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=87.58 E-value=6.6 Score=34.48 Aligned_cols=110 Identities=7% Similarity=0.056 Sum_probs=58.2
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCC----CCCCCceEEEcCCCCC-CCcCCcccHHHHHHHH
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSPNP----SNYPHFTFCSIQDGLS-ETEASTTDFVALISVL 89 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 89 (461)
||||+.-==+. |---+.+|+++|++.| +|+++.+..+.+.. .-..-+++..+..+-. ....-...+..-....
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~v~GTPaDCV~la 78 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHSITIHVPLWMKKVFISERVVAYSTTGTPADCVKLA 78 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCCCCSSCCCEEECCCSSSEEEEEESSCHHHHHHHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCCceEEECCcHHHHHHHH
Confidence 45555543222 2233678899999888 89999997554332 1122345555533200 0011122232222222
Q ss_pred HHHcchhHHHHHHHHhhcccccCCCCccEEEeCC----------Cc---hhhHHHHHHcCCCeEEEec
Q 012543 90 HVKCAAPFQDCLAKLLSNAEEKEEEPIACLITDA----------SW---FFTHDVAESLKLPRIVLRS 144 (461)
Q Consensus 90 ~~~~~~~~~~~~~~l~~~~~~~~~~~pDlvi~D~----------~~---~~a~~~A~~lgiP~v~~~~ 144 (461)
. ..+.. .+||+||+-. ++ .+|+.=|..+|||.|.++.
T Consensus 79 l-----------~~l~~-------~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 79 Y-----------NVVMD-------KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp H-----------HTTST-------TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred H-----------Hhhcc-------CCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 1 22222 6799999631 22 3445556788999999875
No 63
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=87.51 E-value=4.6 Score=36.21 Aligned_cols=110 Identities=8% Similarity=0.004 Sum_probs=58.1
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCC----CCCCceEEEcCCCCCCCcCCcccHHHHHHHHH
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSPNPS----NYPHFTFCSIQDGLSETEASTTDFVALISVLH 90 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (461)
||||+.-==+. +---+.+|++.|++.| +|+++.|..+.+... -..-+++..++.+-.....-...+..-....
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~siTl~~pl~~~~~~~~~~~~~~v~GTPaDCV~la- 77 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGITLHKPLRMYEVDLCGFRAIATSGTPSDTVYLA- 77 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSCCCSSCBCEEEEECSSSEEEEESSCHHHHHHHH-
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCceEEECCcHHHHHHHH-
Confidence 45655543222 2233678899999988 899999975543321 1123444444321000111122332222211
Q ss_pred HHcchhHHHHHHHHhhcccccCCCCccEEEeC-----------CC---chhhHHHHHHcCCCeEEEecc
Q 012543 91 VKCAAPFQDCLAKLLSNAEEKEEEPIACLITD-----------AS---WFFTHDVAESLKLPRIVLRSL 145 (461)
Q Consensus 91 ~~~~~~~~~~~~~l~~~~~~~~~~~pDlvi~D-----------~~---~~~a~~~A~~lgiP~v~~~~~ 145 (461)
+..+ . .+||+||+- .+ +.+|+.=|..+|||.|.++..
T Consensus 78 ----------l~~l-~-------~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (280)
T 1l5x_A 78 ----------TFGL-G-------RKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (280)
T ss_dssp ----------HHHH-T-------SCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred ----------HhcC-C-------CCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEcc
Confidence 2223 2 679999963 11 234455567889999999764
No 64
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=86.56 E-value=8.9 Score=33.60 Aligned_cols=108 Identities=7% Similarity=-0.038 Sum_probs=59.5
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCC----CCCCCceEEEcCCCCC----CCcCCcccHHHHH
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSPNP----SNYPHFTFCSIQDGLS----ETEASTTDFVALI 86 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~~~~----~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 86 (461)
||||+.-==+. |---+.+|++.|++.| +|+++.+..+.+.. .-..-+++..++.+.+ ....-...+..-.
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~~~~v~GTPaDCV 78 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAITIAHPVRAYPHPSPLHAPHFPAYRVRGTPADCV 78 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSCCCSSCBEEEECCCCTTSCCCCEEEEESCHHHHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCcCCCCCceEEEcCcHHHHH
Confidence 45655543222 2233678899999888 89999997554332 2223466666643211 1111122332222
Q ss_pred HHHHHHcchhHHHHHHHHhhcccccCCCCccEEEeC----------CCc---hhhHHHHHHcCCCeEEEec
Q 012543 87 SVLHVKCAAPFQDCLAKLLSNAEEKEEEPIACLITD----------ASW---FFTHDVAESLKLPRIVLRS 144 (461)
Q Consensus 87 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pDlvi~D----------~~~---~~a~~~A~~lgiP~v~~~~ 144 (461)
..... + . .+||+||+- .++ .+|+.=|..+|||.|.++.
T Consensus 79 ~lal~------------l-~-------~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 79 ALGLH------------L-F-------GPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp HHHHH------------H-S-------CSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHc------------C-C-------CCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEec
Confidence 22211 1 2 679999963 122 3445556788999999874
No 65
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=84.45 E-value=5.6 Score=35.10 Aligned_cols=109 Identities=11% Similarity=0.097 Sum_probs=57.2
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCC----CCCCceEEEcCCCCCCCcCCcccHHHHHHHHHH
Q 012543 16 RLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSPNPS----NYPHFTFCSIQDGLSETEASTTDFVALISVLHV 91 (461)
Q Consensus 16 ~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (461)
|||+.-==+. +---+.+|+++|++.| +|+++.+..+.+... -...+++....... ...-...+..-....
T Consensus 3 ~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~siT~~~pl~~~~~~~~~--~~~v~GTPaDCV~la-- 76 (251)
T 2wqk_A 3 TFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDTDF--YTVIDGTPADCVHLG-- 76 (251)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCCCSSCEEEEEEETTE--EEETTCCHHHHHHHH--
T ss_pred EEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCcCCCCCceeEEeeccc--eeecCCChHHHHhhh--
Confidence 7776643222 2233567899999999 599888875543321 11234444432110 001122232222111
Q ss_pred HcchhHHHHHHHHhhcccccCCCCccEEEe----------CCCc---hhhHHHHHHcCCCeEEEecc
Q 012543 92 KCAAPFQDCLAKLLSNAEEKEEEPIACLIT----------DASW---FFTHDVAESLKLPRIVLRSL 145 (461)
Q Consensus 92 ~~~~~~~~~~~~l~~~~~~~~~~~pDlvi~----------D~~~---~~a~~~A~~lgiP~v~~~~~ 145 (461)
+..+... .+||+||+ |.++ .+|+.=|..+|||.|.++-.
T Consensus 77 ---------l~~~l~~------~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~~ 128 (251)
T 2wqk_A 77 ---------YRVILEE------KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp ---------HHTTTTT------CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ---------hhhhcCC------CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEcc
Confidence 1122211 68999998 2222 44556678889999998743
No 66
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=84.27 E-value=8.8 Score=36.76 Aligned_cols=36 Identities=11% Similarity=0.074 Sum_probs=25.6
Q ss_pred cCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 11 QKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 11 ~~~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
++|+++|+++..+.... .+.++.++.|++|+++...
T Consensus 2 ~~~~k~l~Il~~~~~~~-----~i~~aa~~lG~~vv~v~~~ 37 (425)
T 3vot_A 2 TKRNKNLAIICQNKHLP-----FIFEEAERLGLKVTFFYNS 37 (425)
T ss_dssp CCCCCEEEEECCCTTCC-----HHHHHHHHTTCEEEEEEET
T ss_pred CCCCcEEEEECCChhHH-----HHHHHHHHCCCEEEEEECC
Confidence 35778888887554322 3567788889999998764
No 67
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=81.75 E-value=1.8 Score=34.39 Aligned_cols=41 Identities=17% Similarity=0.256 Sum_probs=30.1
Q ss_pred CCCCeEEE-EcCC-CccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012543 12 KKGRRLIL-FPLP-FQGHINPMLQLANILYSKGFSITIIHTKF 52 (461)
Q Consensus 12 ~~~~~il~-~~~~-~~GHi~p~l~La~~L~~rGh~V~~~~~~~ 52 (461)
.+.|++++ +.+| ..-.+.-.+=++..|+++||+|++++++.
T Consensus 4 ~~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npA 46 (157)
T 1kjn_A 4 ESTGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPA 46 (157)
T ss_dssp --CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHH
T ss_pred ccceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHH
Confidence 34455544 5566 45667777889999999999999999873
No 68
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=79.98 E-value=14 Score=32.59 Aligned_cols=39 Identities=18% Similarity=0.152 Sum_probs=26.2
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSP 55 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~~ 55 (461)
||||+.-==+. |---+.+|++.|++.| +|+++.+..+.+
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~S 40 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRS 40 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCT
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCc
Confidence 56766543332 3334668899998876 999999975543
No 69
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=79.97 E-value=5.7 Score=40.52 Aligned_cols=40 Identities=18% Similarity=0.184 Sum_probs=30.0
Q ss_pred eecChh---------hhhcCCCCCcccccc---Cc-hHHHHHhhcCCccccCccc
Q 012543 340 KWAPQQ---------EVLAHPATGAFWTHC---GW-NSTLESMCEGVPMICQPCH 381 (461)
Q Consensus 340 ~~vp~~---------~lL~~~~~~~~I~HG---G~-gs~~eal~~GvP~l~~P~~ 381 (461)
.|++.. +++..+++ ||.-. |+ .+.+||+++|+|+|+.-..
T Consensus 499 ~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 499 EFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp SCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred cccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 777664 47888998 66443 33 4899999999999987553
No 70
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=79.31 E-value=0.96 Score=43.53 Aligned_cols=39 Identities=38% Similarity=0.446 Sum_probs=30.2
Q ss_pred CCCeEEEEcCC-Cc----cCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 13 KGRRLILFPLP-FQ----GHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 13 ~~~~il~~~~~-~~----GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
++|||++++.. .. |=......+|++|+++||+|++++..
T Consensus 45 ~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~ 88 (413)
T 2x0d_A 45 KGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTD 88 (413)
T ss_dssp CSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESS
T ss_pred CCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEec
Confidence 56899887643 11 33356889999999999999999985
No 71
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=78.46 E-value=25 Score=28.64 Aligned_cols=142 Identities=13% Similarity=0.125 Sum_probs=78.7
Q ss_pred CCeEEEEEccccccCCHHHHHHHHHHHHhCCCceEEEECCCccCCchhcccCchhHHHHhcCCCceeeecChhhhhcCCC
Q 012543 273 PKSVIYVSFGSIAAIDETKFLEVAWGLANSKVPFLWVVRPGLVRGAEWIELLPRGFLEMLDGRGHIVKWAPQQEVLAHPA 352 (461)
Q Consensus 273 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~~ 352 (461)
-+|.|-|-+||.+ +....+.....++..+.++-..+.+-+ .+|+.+.+... +. -=..++
T Consensus 10 ~~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaH--------R~p~~l~~~~~----------~a-~~~g~~ 68 (170)
T 1xmp_A 10 MKSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAH--------RTPDYMFEYAE----------TA-RERGLK 68 (170)
T ss_dssp -CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTT--------TSHHHHHHHHH----------HT-TTTTCC
T ss_pred CCCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEecc--------CCHHHHHHHHH----------HH-HhCCCc
Confidence 4667888888866 556677888888888877655554432 25555422110 00 001133
Q ss_pred CCccccccCch----HHHHHhhcCCccccCcccch--hhhhH-HHHHH--hhhceee---cC--CccCHHHHHHHHHHHh
Q 012543 353 TGAFWTHCGWN----STLESMCEGVPMICQPCHGE--QMVIA-RYVSD--VWKVGLH---LE--RKLERGEVERAIRRVM 418 (461)
Q Consensus 353 ~~~~I~HGG~g----s~~eal~~GvP~l~~P~~~D--Q~~na-~~v~~--~lG~G~~---l~--~~~~~~~l~~~i~~ll 418 (461)
+ +|.=.|.- ++..++ .-+|+|.+|.... .-..+ .-+.+ . |+.+. ++ ...++.-+...|. -+
T Consensus 69 V--iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~ 143 (170)
T 1xmp_A 69 V--IIAGAGGAAHLPGMVAAK-TNLPVIGVPVQSKALNGLDSLLSIVQMPG-GVPVATVAIGKAGSTNAGLLAAQIL-GS 143 (170)
T ss_dssp E--EEEEEESSCCHHHHHHTT-CCSCEEEEEECCTTTTTHHHHHHHHCCCT-TCCCEECCSSHHHHHHHHHHHHHHH-HT
T ss_pred E--EEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCeeEEEecCCcchHHHHHHHHHHH-cc
Confidence 3 77665532 333333 4789999998542 11111 12222 1 44321 22 1245555555554 34
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhc
Q 012543 419 VDAEGREMRNRAAILKEKLDLCTKQ 443 (461)
Q Consensus 419 ~~~~~~~~~~~a~~l~~~~~~~~~~ 443 (461)
.| +.++++.+.+++++++.+.+
T Consensus 144 ~d---~~l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 144 FH---DDIHDALELRREAIEKDVRE 165 (170)
T ss_dssp TC---HHHHHHHHHHHHHHHHHHHC
T ss_pred CC---HHHHHHHHHHHHHHHHHHHh
Confidence 56 78999999999988866543
No 72
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=77.73 E-value=6.9 Score=33.02 Aligned_cols=99 Identities=15% Similarity=0.159 Sum_probs=60.0
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCC-C-----CCCCCCCceEEEcCCCCCCCcCCcccHHHHH
Q 012543 13 KGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNS-P-----NPSNYPHFTFCSIQDGLSETEASTTDFVALI 86 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (461)
.+-.|++++..+.|-....+.+|.+...+|++|.|+..-... . .... -++++.....++.. ...+..+.
T Consensus 27 ~~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~-L~v~~~~~g~gf~~---~~~~~~~~- 101 (196)
T 1g5t_A 27 ERGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEP-HGVEFQVMATGFTW---ETQNREAD- 101 (196)
T ss_dssp CCCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGG-GTCEEEECCTTCCC---CGGGHHHH-
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHh-CCcEEEEccccccc---CCCCcHHH-
Confidence 345788888888999999999999999999999999654221 0 1112 24788877764431 11111111
Q ss_pred HHHHHHcchhHHHHHHHHhhcccccCCCCccEEEeCCCch
Q 012543 87 SVLHVKCAAPFQDCLAKLLSNAEEKEEEPIACLITDASWF 126 (461)
Q Consensus 87 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pDlvi~D~~~~ 126 (461)
.......+....+.+.+ .++|+||.|.+..
T Consensus 102 ---~~~a~~~l~~a~~~l~~-------~~yDlvILDEi~~ 131 (196)
T 1g5t_A 102 ---TAACMAVWQHGKRMLAD-------PLLDMVVLDELTY 131 (196)
T ss_dssp ---HHHHHHHHHHHHHHTTC-------TTCSEEEEETHHH
T ss_pred ---HHHHHHHHHHHHHHHhc-------CCCCEEEEeCCCc
Confidence 11112222233333322 6799999997753
No 73
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=75.76 E-value=32 Score=28.32 Aligned_cols=142 Identities=13% Similarity=0.083 Sum_probs=77.8
Q ss_pred CCeEEEEEccccccCCHHHHHHHHHHHHhCCCceEEEECCCccCCchhcccCchhHHHHhcCCCceeeecChhhhhcCCC
Q 012543 273 PKSVIYVSFGSIAAIDETKFLEVAWGLANSKVPFLWVVRPGLVRGAEWIELLPRGFLEMLDGRGHIVKWAPQQEVLAHPA 352 (461)
Q Consensus 273 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~~ 352 (461)
.-|.|-|-+||.+ +....+.....++..+.++-.-+.+-+ .+|+.+.+-.. +. -=..++
T Consensus 12 ~~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaH--------R~p~~l~~~~~----------~a-~~~g~~ 70 (183)
T 1o4v_A 12 HVPRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSAH--------RTPDRMFEYAK----------NA-EERGIE 70 (183)
T ss_dssp --CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCTT--------TCHHHHHHHHH----------HT-TTTTCC
T ss_pred CCCeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEccc--------CCHHHHHHHHH----------HH-HhCCCc
Confidence 3567888888866 556677888888888877655554432 25555422110 00 001233
Q ss_pred CCccccccCc----hHHHHHhhcCCccccCcccch--hhhhH-HHHHHhh--hceeec---CCccCHHHHHHHHHHHhcc
Q 012543 353 TGAFWTHCGW----NSTLESMCEGVPMICQPCHGE--QMVIA-RYVSDVW--KVGLHL---ERKLERGEVERAIRRVMVD 420 (461)
Q Consensus 353 ~~~~I~HGG~----gs~~eal~~GvP~l~~P~~~D--Q~~na-~~v~~~l--G~G~~l---~~~~~~~~l~~~i~~ll~~ 420 (461)
+ +|.=.|. .++..++ .-+|+|.+|.... .-..+ .-+.+ + |+.+.. +...++.-+...|. -+.|
T Consensus 71 V--iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivq-mP~GvpVatV~Id~~~nAa~lAaqIl-a~~d 145 (183)
T 1o4v_A 71 V--IIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQ-MPGGVPVATVAINNAKNAGILAASIL-GIKY 145 (183)
T ss_dssp E--EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHT-CCTTCCCEECCTTCHHHHHHHHHHHH-HTTC
T ss_pred E--EEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhc-CCCCCeeEEEecCCchHHHHHHHHHH-hcCC
Confidence 3 7766553 3444444 6789999998542 11222 22333 4 533221 22445555555554 3456
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhc
Q 012543 421 AEGREMRNRAAILKEKLDLCTKQ 443 (461)
Q Consensus 421 ~~~~~~~~~a~~l~~~~~~~~~~ 443 (461)
+.++++.+..++++.+.+.+
T Consensus 146 ---~~l~~kL~~~r~~~~~~v~~ 165 (183)
T 1o4v_A 146 ---PEIARKVKEYKERMKREVLE 165 (183)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHHH
Confidence 67888888888887765533
No 74
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=75.74 E-value=3.7 Score=35.10 Aligned_cols=37 Identities=19% Similarity=0.164 Sum_probs=32.6
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
++||++.-.|+.|-+. ...|.+.|+++|++|.++.++
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~ 40 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISK 40 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECc
Confidence 4688888888888777 889999999999999999886
No 75
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=75.34 E-value=23 Score=30.98 Aligned_cols=36 Identities=11% Similarity=0.153 Sum_probs=28.3
Q ss_pred CCeEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012543 14 GRRLILFPL--PFQGHINPMLQLANILYSKGFSITIIH 49 (461)
Q Consensus 14 ~~~il~~~~--~~~GHi~p~l~La~~L~~rGh~V~~~~ 49 (461)
+++.+|++. ...|=..-.+.|++.|+++|.+|.++=
T Consensus 20 m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 20 QGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp CCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred cCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 335555443 467899999999999999999999974
No 76
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=73.90 E-value=5.1 Score=34.00 Aligned_cols=43 Identities=14% Similarity=-0.006 Sum_probs=33.8
Q ss_pred CCCeEEEEcCCCccCHH-HHHHHHHHHHhCCCeEEEEeCCCCCCC
Q 012543 13 KGRRLILFPLPFQGHIN-PMLQLANILYSKGFSITIIHTKFNSPN 56 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~-p~l~La~~L~~rGh~V~~~~~~~~~~~ 56 (461)
+++||++.-.|+ +..+ -.+.+.+.|+++|++|.++.++.....
T Consensus 6 ~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~ 49 (201)
T 3lqk_A 6 AGKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQTT 49 (201)
T ss_dssp TTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSCCT
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHHHH
Confidence 456888877777 4555 789999999999999999998644333
No 77
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=73.87 E-value=2.8 Score=34.21 Aligned_cols=39 Identities=15% Similarity=0.301 Sum_probs=35.4
Q ss_pred CCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 12 KKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 12 ~~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
+++.+|++.+.++-.|-....-++..|...|++|.++..
T Consensus 16 ~~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~ 54 (161)
T 2yxb_A 16 RRRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGL 54 (161)
T ss_dssp CCSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCS
T ss_pred CCCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCC
Confidence 357799999999999999999999999999999998765
No 78
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=73.62 E-value=4.4 Score=31.98 Aligned_cols=37 Identities=16% Similarity=0.172 Sum_probs=33.9
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
+.+|++.+.++-+|-....-++..|..+|++|.++..
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~ 39 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGV 39 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCC
Confidence 4689999999999999999999999999999998876
No 79
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=69.68 E-value=16 Score=30.43 Aligned_cols=36 Identities=19% Similarity=0.446 Sum_probs=29.9
Q ss_pred eEEEE-cCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 16 RLILF-PLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 16 ~il~~-~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
.|.|+ +-|+-|-..-...||..|+++|++|.++-.+
T Consensus 3 vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D 39 (206)
T 4dzz_A 3 VISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTD 39 (206)
T ss_dssp EEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 44454 3478899999999999999999999998775
No 80
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=68.29 E-value=4.2 Score=42.26 Aligned_cols=108 Identities=6% Similarity=-0.003 Sum_probs=75.0
Q ss_pred eecChhhhhcCCCCCccccccCchHHHHHhhcCCccccCcccchhhhhHHHHHHhhhceeec----C-C-ccCHHHHHHH
Q 012543 340 KWAPQQEVLAHPATGAFWTHCGWNSTLESMCEGVPMICQPCHGEQMVIARYVSDVWKVGLHL----E-R-KLERGEVERA 413 (461)
Q Consensus 340 ~~vp~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~l----~-~-~~~~~~l~~~ 413 (461)
++.+-.++|..+|+ .||=- ...+.|.+..++|+|....-.|+.... .. |.=... . . -.+.++|.++
T Consensus 605 ~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~----~r-g~y~d~~~~~pg~~~~~~~eL~~~ 676 (729)
T 3l7i_A 605 NYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDKG----LR-GFYMNYMEDLPGPIYTEPYGLAKE 676 (729)
T ss_dssp TCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTSS----CC-SBSSCTTSSSSSCEESSHHHHHHH
T ss_pred CCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhhc----cC-CcccChhHhCCCCeECCHHHHHHH
Confidence 45566789999998 88875 447899999999999987766665331 11 221111 1 1 3578999999
Q ss_pred HHHHhcchhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012543 414 IRRVMVDAEGREMRNRAAILKEKLDLCTKQGSSSYQSLENLISYI 458 (461)
Q Consensus 414 i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~l 458 (461)
|.....+. ..|+++.+++.+++-. ..+|.++++.++.+.+..
T Consensus 677 i~~~~~~~--~~~~~~~~~~~~~~~~-~~dg~as~ri~~~i~~~~ 718 (729)
T 3l7i_A 677 LKNLDKVQ--QQYQEKIDAFYDRFCS-VDNGKASQYIGDLIHKDI 718 (729)
T ss_dssp HTTHHHHH--HHTHHHHHHHHHHHST-TCCSCHHHHHHHHHHHHH
T ss_pred Hhhhhccc--hhHHHHHHHHHHHhCC-ccCChHHHHHHHHHHhcC
Confidence 98877631 4688888888887753 346777888888777654
No 81
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=67.25 E-value=6.6 Score=32.49 Aligned_cols=38 Identities=16% Similarity=0.068 Sum_probs=31.6
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFN 53 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~ 53 (461)
+||++.-.|+.|=+. ...+.+.|+++|++|.++.++..
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A 43 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNG 43 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGG
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCH
Confidence 588887778777665 88999999999999999998643
No 82
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=67.21 E-value=8.3 Score=34.18 Aligned_cols=40 Identities=10% Similarity=0.063 Sum_probs=36.5
Q ss_pred CCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 12 KKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 12 ~~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
.++.+|++.+.++..|-....-++..|..+|++|.++...
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~ 160 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD 160 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 4567999999999999999999999999999999998764
No 83
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=66.64 E-value=6.8 Score=33.43 Aligned_cols=39 Identities=18% Similarity=0.087 Sum_probs=35.5
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 13 KGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
++.+|++.+.++..|-....-++..|..+|++|.++...
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~ 125 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVD 125 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSS
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 456899999999999999999999999999999998763
No 84
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=66.57 E-value=7.1 Score=32.99 Aligned_cols=36 Identities=17% Similarity=0.086 Sum_probs=30.9
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSK-GFSITIIHTK 51 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~r-Gh~V~~~~~~ 51 (461)
|||++.-.|+.|-+. ...+.+.|+++ |++|.++.++
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~ 37 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSK 37 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECc
Confidence 478887778877766 89999999999 9999999886
No 85
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=66.49 E-value=5.5 Score=33.98 Aligned_cols=39 Identities=10% Similarity=0.009 Sum_probs=30.6
Q ss_pred CCeEEEEcCCCccCHHH-HHHHHHHHHhCCCeEEEEeCCCC
Q 012543 14 GRRLILFPLPFQGHINP-MLQLANILYSKGFSITIIHTKFN 53 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p-~l~La~~L~~rGh~V~~~~~~~~ 53 (461)
++||++.-.|+ +..+- ...+.+.|+++|++|.++.++..
T Consensus 5 ~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A 44 (207)
T 3mcu_A 5 GKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTV 44 (207)
T ss_dssp TCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC--
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHH
Confidence 45788876676 45665 89999999999999999998633
No 86
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=63.24 E-value=24 Score=34.22 Aligned_cols=88 Identities=14% Similarity=0.097 Sum_probs=52.1
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCcCCcccHHHHHHHHHHHc
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSPNPSNYPHFTFCSIQDGLSETEASTTDFVALISVLHVKC 93 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (461)
.+|++++.- -.-.+++++-|.+.|.+|..+.+........+.. .......+..
T Consensus 313 Gkrv~i~~~-----~~~~~~l~~~L~elGm~vv~~~~~~~~~~~~~~~------------~~~v~~~D~~---------- 365 (458)
T 3pdi_B 313 SARTAIAAD-----PDLLLGFDALLRSMGAHTVAAVVPARAAALVDSP------------LPSVRVGDLE---------- 365 (458)
T ss_dssp TCEEEEECC-----HHHHHHHHHHHHTTTCEEEEEEESSCCSCCTTTT------------SSCEEESHHH----------
T ss_pred CCEEEEECC-----cHHHHHHHHHHHHCCCEEEEEEECCCChhhhhCc------------cCcEEeCCHH----------
Confidence 468888543 3455788888988999999988754222111100 0000001111
Q ss_pred chhHHHHHHHHhhcccccCCCCccEEEeCCCchhhHHHHHHcCCCeEEEe
Q 012543 94 AAPFQDCLAKLLSNAEEKEEEPIACLITDASWFFTHDVAESLKLPRIVLR 143 (461)
Q Consensus 94 ~~~~~~~~~~l~~~~~~~~~~~pDlvi~D~~~~~a~~~A~~lgiP~v~~~ 143 (461)
.++++++. .+||++|.+.. ...+|+++|||++.++
T Consensus 366 ------~le~~i~~------~~pDllig~~~---~~~~a~k~gip~~~~g 400 (458)
T 3pdi_B 366 ------DLEHAARA------GQAQLVIGNSH---ALASARRLGVPLLRAG 400 (458)
T ss_dssp ------HHHHHHHH------HTCSEEEECTT---HHHHHHHTTCCEEECS
T ss_pred ------HHHHHHHh------cCCCEEEEChh---HHHHHHHcCCCEEEec
Confidence 12222222 67999999844 5678999999999853
No 87
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=62.94 E-value=19 Score=30.62 Aligned_cols=45 Identities=9% Similarity=-0.133 Sum_probs=33.2
Q ss_pred hhhhcCCCCCCeEEEEEccccccCCHHHHHHHHHHHHhCCCceEE
Q 012543 264 CISRLDKQAPKSVIYVSFGSIAAIDETKFLEVAWGLANSKVPFLW 308 (461)
Q Consensus 264 l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~ 308 (461)
+.+|+.....+.++||..+|......+....+.+++++++..+.+
T Consensus 18 ~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~ 62 (206)
T 3l4e_A 18 FTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEE 62 (206)
T ss_dssp HHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEE
Confidence 455664445688999998876544456788899999999987543
No 88
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=62.03 E-value=9.4 Score=30.52 Aligned_cols=40 Identities=28% Similarity=0.492 Sum_probs=26.0
Q ss_pred cccccC-CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 7 SHMQQK-KGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 7 ~~m~~~-~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
-+|... ..++|+++..|..| ..+++.|.++|++|+++...
T Consensus 11 ~~~~~~~~~~~v~IiG~G~iG-----~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 11 HHMSKKQKSKYIVIFGCGRLG-----SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp ------CCCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred hhhhcccCCCcEEEECCCHHH-----HHHHHHHHhCCCeEEEEECC
Confidence 356655 46788888654333 55789999999999998764
No 89
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=61.46 E-value=9.7 Score=32.66 Aligned_cols=39 Identities=18% Similarity=0.093 Sum_probs=35.5
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 13 KGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
++.+|++.+.++-.|-....-++..|..+|++|+++...
T Consensus 91 ~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~ 129 (215)
T 3ezx_A 91 EAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVD 129 (215)
T ss_dssp -CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSS
T ss_pred CCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCC
Confidence 567999999999999999999999999999999998774
No 90
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=61.34 E-value=8 Score=34.82 Aligned_cols=32 Identities=22% Similarity=0.423 Sum_probs=24.4
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
|||+++ |+.|-+-. .|+++|.++||+|+.++-
T Consensus 1 MkILVT--GatGfIG~--~L~~~L~~~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVG--GGTGFIGT--ALTQLLNARGHEVTLVSR 32 (298)
T ss_dssp CEEEEE--TTTSHHHH--HHHHHHHHTTCEEEEEES
T ss_pred CEEEEE--CCCCHHHH--HHHHHHHHCCCEEEEEEC
Confidence 576654 56666654 578999999999999875
No 91
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=61.04 E-value=10 Score=32.38 Aligned_cols=40 Identities=15% Similarity=0.114 Sum_probs=33.0
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 012543 13 KGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNS 54 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~ 54 (461)
+++||++...|+.+-+. ...|.+.|+++| +|.++.++...
T Consensus 18 ~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~ 57 (209)
T 1mvl_A 18 RKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSL 57 (209)
T ss_dssp -CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGG
T ss_pred CCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHH
Confidence 45789998888888776 899999999999 99999986443
No 92
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=60.72 E-value=12 Score=32.38 Aligned_cols=39 Identities=21% Similarity=0.179 Sum_probs=35.3
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 13 KGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
.+++|++..-|+-|-..-++.+|..|+++|++|.++..+
T Consensus 5 g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D 43 (228)
T 2r8r_A 5 GRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVE 43 (228)
T ss_dssp CCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred ceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 357889999999999999999999999999999987775
No 93
>2p90_A Hypothetical protein CGL1923; structural genomics, PSI-2, MCSG structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032} SCOP: c.56.8.1
Probab=60.16 E-value=66 Score=29.31 Aligned_cols=149 Identities=11% Similarity=0.041 Sum_probs=74.1
Q ss_pred CCeEEEEEccccccCC-HHHHHHHHHHHHhCCCceEEEECCCccCCchhcccCchhHHHHhcCCCceeeecChhhhhcCC
Q 012543 273 PKSVIYVSFGSIAAID-ETKFLEVAWGLANSKVPFLWVVRPGLVRGAEWIELLPRGFLEMLDGRGHIVKWAPQQEVLAHP 351 (461)
Q Consensus 273 ~~~~v~vs~Gs~~~~~-~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~ 351 (461)
+.++++++ |...... .++...+++.+++.+.+-|+.+++-. ...|.. .+. .+........+....
T Consensus 101 g~~~lll~-gpeP~~~w~~f~~~vl~~a~~~gV~~vv~Lggl~-------~~~pht----rp~--~V~~~at~~~l~~~~ 166 (319)
T 2p90_A 101 NKPFLMLS-GPEPDLRWGDFSNAVVDLVEKFGVENTICLYAAP-------MTVPHT----RPT--VVTAHGNSTDRLKDQ 166 (319)
T ss_dssp CCEEEEEE-EECCSBCHHHHHHHHHHHHHHTTCCEEEEEEEEE-------ESCCTT----SCC--CEEEEESSGGGCSSC
T ss_pred CCeEEEEE-CCCChHHHHHHHHHHHHHHHHcCCCEEEEEeCcc-------CCCCCC----CCC--CeEEEeCCHHHHhhh
Confidence 34566665 6655533 46677799999999998877765521 111100 000 122222222333222
Q ss_pred CC--CccccccCchHHHHH--hhcCCccccCcccc-------hhhhhHHHHHHhhh--ceeecCC---ccCHHHHHHHHH
Q 012543 352 AT--GAFWTHCGWNSTLES--MCEGVPMICQPCHG-------EQMVIARYVSDVWK--VGLHLER---KLERGEVERAIR 415 (461)
Q Consensus 352 ~~--~~~I~HGG~gs~~ea--l~~GvP~l~~P~~~-------DQ~~na~~v~~~lG--~G~~l~~---~~~~~~l~~~i~ 415 (461)
.. +-..--||..++.+. ...|+|.+++=... +-|.=|..+-+.+. +|+.++. .-.++.+.+.|+
T Consensus 167 ~~~~~~~~ipggi~glL~~~~~~~Gi~a~~l~~~vphYl~~~pdP~AA~~lL~~l~~l~gl~id~~~L~e~A~~~e~~i~ 246 (319)
T 2p90_A 167 VSLDTRMTVPGSASLMLEKLLKDKGKNVSGYTVHVPHYVSASPYPAATLKLLQSIADSADLNLPLLALERDAEKVHRQLM 246 (319)
T ss_dssp CCCCCCEEECCCHHHHHHHHHHHTTCCEEEEEEEEEGGGTTSCCHHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHH
T ss_pred hccccCcEEeccHHHHHHHHHHHCCCCEEEEEEecCcccCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Confidence 11 001123566655544 56899998874321 22333322211121 3555554 446678888888
Q ss_pred HHhcchhHHHHHHHHHHHHHHH
Q 012543 416 RVMVDAEGREMRNRAAILKEKL 437 (461)
Q Consensus 416 ~ll~~~~~~~~~~~a~~l~~~~ 437 (461)
++.+.. +.+.+-++.|-+..
T Consensus 247 ~l~~~~--~e~~~~V~~LE~~~ 266 (319)
T 2p90_A 247 EQTEES--SEIQRVVGALEQQY 266 (319)
T ss_dssp HHHHHC--HHHHHHHHHHHHHH
T ss_pred HHHHhh--HHHHHHHHHHHhhh
Confidence 888632 34444444444433
No 94
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=60.07 E-value=5.2 Score=35.85 Aligned_cols=53 Identities=11% Similarity=0.206 Sum_probs=37.2
Q ss_pred CCCCCccccccCchHHHHHhhc------CCccccCcccchhhhhHHHHHHhhhceeecCCccCHHHHHHHHHHHhcc
Q 012543 350 HPATGAFWTHCGWNSTLESMCE------GVPMICQPCHGEQMVIARYVSDVWKVGLHLERKLERGEVERAIRRVMVD 420 (461)
Q Consensus 350 ~~~~~~~I~HGG~gs~~eal~~------GvP~l~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~l~~~i~~ll~~ 420 (461)
.+|+ +|.-||=||+.+++.. ++|++.+|.. -+| -+. .+.++++.+++++++++
T Consensus 35 ~~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G--------------~lg-fl~-~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 35 EPEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHTG--------------HLG-FYA-DWRPAEADKLVKLLAKG 93 (272)
T ss_dssp SCSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEESS--------------SCC-SSC-CBCGGGHHHHHHHHHTT
T ss_pred CCCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC--------------CCC-cCC-cCCHHHHHHHHHHHHcC
Confidence 3466 9999999999999764 8899888741 012 111 34577777777777765
No 95
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=59.69 E-value=15 Score=30.68 Aligned_cols=37 Identities=19% Similarity=0.283 Sum_probs=31.3
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKF 52 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~ 52 (461)
+||++.-.|+.|-+ =...+.++|+++|++|.++.++.
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~ 38 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRN 38 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChh
Confidence 38888888888855 57899999999999999998863
No 96
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=59.04 E-value=6.4 Score=30.85 Aligned_cols=33 Identities=12% Similarity=0.085 Sum_probs=25.2
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
+++|+++.. |.+ -..+++.|.++||+|+++...
T Consensus 6 ~~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECC
Confidence 458888865 333 357899999999999998763
No 97
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=58.04 E-value=18 Score=30.49 Aligned_cols=108 Identities=17% Similarity=0.087 Sum_probs=61.1
Q ss_pred cCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCC-C------------CCCc------CCcccHHHHH
Q 012543 26 GHINPMLQLANILYSKGFSITIIHTKFNSPNPSNYPHFTFCSIQDG-L------------SETE------ASTTDFVALI 86 (461)
Q Consensus 26 GHi~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~-~------------~~~~------~~~~~~~~~~ 86 (461)
|.+.-.+.+|+++ +.|.+|.+.-. .+...+.+..++..+.++-. + .... ........+.
T Consensus 36 ~~l~~~v~~a~~~-~~~~dVIISRG-gta~~lr~~~~iPVV~I~~s~~Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~ 113 (196)
T 2q5c_A 36 ASLTRASKIAFGL-QDEVDAIISRG-ATSDYIKKSVSIPSISIKVTRFDTMRAVYNAKRFGNELALIAYKHSIVDKHEIE 113 (196)
T ss_dssp CCHHHHHHHHHHH-TTTCSEEEEEH-HHHHHHHTTCSSCEEEECCCHHHHHHHHHHHGGGCSEEEEEEESSCSSCHHHHH
T ss_pred CCHHHHHHHHHHh-cCCCeEEEECC-hHHHHHHHhCCCCEEEEcCCHhHHHHHHHHHHhhCCcEEEEeCcchhhHHHHHH
Confidence 5677778888888 88888777544 22222222234556665411 0 0000 0111222221
Q ss_pred HHHHHH-------cchhHHHHHHHHhhcccccCCCCccEEEeCCCchhhHHHHHHcCCCeEEEecc
Q 012543 87 SVLHVK-------CAAPFQDCLAKLLSNAEEKEEEPIACLITDASWFFTHDVAESLKLPRIVLRSL 145 (461)
Q Consensus 87 ~~~~~~-------~~~~~~~~~~~l~~~~~~~~~~~pDlvi~D~~~~~a~~~A~~lgiP~v~~~~~ 145 (461)
..+... ....+.+.++++.+ .+.|+||.|.. +..+|+++|+|.+.+.++
T Consensus 114 ~ll~~~i~~~~~~~~~e~~~~i~~l~~-------~G~~vvVG~~~---~~~~A~~~Gl~~vli~sg 169 (196)
T 2q5c_A 114 AMLGVKIKEFLFSSEDEITTLISKVKT-------ENIKIVVSGKT---VTDEAIKQGLYGETINSG 169 (196)
T ss_dssp HHHTCEEEEEEECSGGGHHHHHHHHHH-------TTCCEEEECHH---HHHHHHHTTCEEEECCCC
T ss_pred HHhCCceEEEEeCCHHHHHHHHHHHHH-------CCCeEEECCHH---HHHHHHHcCCcEEEEecC
Confidence 111100 12345667777777 78999999832 478999999999998775
No 98
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=56.38 E-value=35 Score=28.62 Aligned_cols=30 Identities=7% Similarity=0.064 Sum_probs=24.8
Q ss_pred CCCCCccccccCchHHHHHhhcCCccccCcccc
Q 012543 350 HPATGAFWTHCGWNSTLESMCEGVPMICQPCHG 382 (461)
Q Consensus 350 ~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~ 382 (461)
.+++ +|+.||.+.....- .++|+|-++..+
T Consensus 51 ~~dV--IISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 51 EVDA--IISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp TCSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCeE--EEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 4555 99999999988875 579999999864
No 99
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=55.79 E-value=8.8 Score=32.34 Aligned_cols=37 Identities=14% Similarity=0.036 Sum_probs=31.1
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
++||++...|+.|=+. ...+.+.|+++|++|.++.++
T Consensus 8 ~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~ 44 (194)
T 1p3y_1 8 DKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTK 44 (194)
T ss_dssp GCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEch
Confidence 4588887778877775 789999999999999999886
No 100
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=55.76 E-value=9.7 Score=30.34 Aligned_cols=33 Identities=15% Similarity=0.216 Sum_probs=25.7
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
+.||+++.. |++- ..+++.|.++||+|+++...
T Consensus 3 ~~~vlI~G~---G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGH---SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECC---SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECC---CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 457888754 5444 67899999999999998873
No 101
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=54.38 E-value=89 Score=25.62 Aligned_cols=142 Identities=14% Similarity=0.157 Sum_probs=78.0
Q ss_pred CCeEEEEEccccccCCHHHHHHHHHHHHhCCCceEEEECCCccCCchhcccCchhHHHHhcCCCceeeecChhhhhcCCC
Q 012543 273 PKSVIYVSFGSIAAIDETKFLEVAWGLANSKVPFLWVVRPGLVRGAEWIELLPRGFLEMLDGRGHIVKWAPQQEVLAHPA 352 (461)
Q Consensus 273 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~~ 352 (461)
-+|.|-|-+||.+ +....+...+.|+.++..+-..+.+-+ ..|+.+.+.. .-.....
T Consensus 21 mkp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SAH--------Rtp~~l~~~~-------------~~a~~~g 77 (181)
T 4b4k_A 21 MKSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAH--------RTPDYMFEYA-------------ETARERG 77 (181)
T ss_dssp -CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTT--------TSHHHHHHHH-------------HHTTTTT
T ss_pred CCccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEccc--------cChHHHHHHH-------------HHHHhcC
Confidence 4677888899876 456678888899998877655555432 2555442211 0011122
Q ss_pred CCccccccCc----hHHHHHhhcCCccccCcccchh---hhhHHHHHHhhhceeecCC-ccC------HHHHHHHHHHHh
Q 012543 353 TGAFWTHCGW----NSTLESMCEGVPMICQPCHGEQ---MVIARYVSDVWKVGLHLER-KLE------RGEVERAIRRVM 418 (461)
Q Consensus 353 ~~~~I~HGG~----gs~~eal~~GvP~l~~P~~~DQ---~~na~~v~~~lG~G~~l~~-~~~------~~~l~~~i~~ll 418 (461)
++++|.=.|. .++..+ ..-+|+|.+|....- .+.-.-+.+ +=-|+-+-. ... +.-+...|-. +
T Consensus 78 ~~ViIa~AG~aahLpGvvAa-~T~~PVIGVPv~s~~l~G~DsLlSivQ-MP~GvpVaTvaig~~ga~NAallA~qILa-~ 154 (181)
T 4b4k_A 78 LKVIIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIVQ-MPGGVPVATVAIGKAGSTNAGLLAAQILG-S 154 (181)
T ss_dssp CCEEEEEECSSCCHHHHHHT-TCCSCEEEEECCCTTTTTHHHHHHHHT-CCTTCCCEECCSSHHHHHHHHHHHHHHHT-T
T ss_pred ceEEEEeccccccchhhHHh-cCCCCEEEEecCCCCccchhhHHHHHh-CCCCCceEEEecCCccHHHHHHHHHHHHc-c
Confidence 3336665553 233333 456899999985432 333334444 434443333 222 2222222221 3
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhc
Q 012543 419 VDAEGREMRNRAAILKEKLDLCTKQ 443 (461)
Q Consensus 419 ~~~~~~~~~~~a~~l~~~~~~~~~~ 443 (461)
.| +.++++.+..++.+++.+.+
T Consensus 155 ~d---~~l~~kl~~~r~~~~~~v~~ 176 (181)
T 4b4k_A 155 FH---DDIHDALELRREAIEKDVRE 176 (181)
T ss_dssp TC---HHHHHHHHHHHHHHHHHHHH
T ss_pred CC---HHHHHHHHHHHHHHHHHHHH
Confidence 45 78899998888888765543
No 102
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=54.33 E-value=75 Score=27.16 Aligned_cols=37 Identities=11% Similarity=0.148 Sum_probs=30.6
Q ss_pred eEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012543 16 RLILFPL-PFQGHINPMLQLANILYSKGFSITIIHTKF 52 (461)
Q Consensus 16 ~il~~~~-~~~GHi~p~l~La~~L~~rGh~V~~~~~~~ 52 (461)
.+.+++. ++.|=..-++.++..+..+|.+|.++.+..
T Consensus 13 ~i~litG~mGsGKTT~ll~~~~r~~~~g~kVli~~~~~ 50 (223)
T 2b8t_A 13 WIEFITGPMFAGKTAELIRRLHRLEYADVKYLVFKPKI 50 (223)
T ss_dssp EEEEEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred EEEEEECCCCCcHHHHHHHHHHHHHhcCCEEEEEEecc
Confidence 4555554 599999999999999999999999987653
No 103
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=53.86 E-value=92 Score=25.61 Aligned_cols=142 Identities=9% Similarity=0.073 Sum_probs=78.5
Q ss_pred CeEEEEEccccccCCHHHHHHHHHHHHhCCCceEEEECCCccCCchhcccCchhHHHHhcCCCceeeecChhhhhcCCCC
Q 012543 274 KSVIYVSFGSIAAIDETKFLEVAWGLANSKVPFLWVVRPGLVRGAEWIELLPRGFLEMLDGRGHIVKWAPQQEVLAHPAT 353 (461)
Q Consensus 274 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~~~ 353 (461)
++.|-|-+||.+ +....+.....++..+.++-..+.+-+ .+|+.+.+... +. -=..+++
T Consensus 21 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaH--------R~p~~l~~~~~----------~a-~~~g~~V 79 (182)
T 1u11_A 21 APVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVSAH--------RTPDRLADYAR----------TA-AERGLNV 79 (182)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTT--------TCHHHHHHHHH----------HT-TTTTCCE
T ss_pred CCEEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEccc--------CCHHHHHHHHH----------HH-HhCCCcE
Confidence 445767777755 456677888888888877655554432 25555422110 00 0011333
Q ss_pred CccccccCc----hHHHHHhhcCCccccCcccch--hhhhH-HHHHH--hhhceee---cC--CccCHHHHHHHHHHHhc
Q 012543 354 GAFWTHCGW----NSTLESMCEGVPMICQPCHGE--QMVIA-RYVSD--VWKVGLH---LE--RKLERGEVERAIRRVMV 419 (461)
Q Consensus 354 ~~~I~HGG~----gs~~eal~~GvP~l~~P~~~D--Q~~na-~~v~~--~lG~G~~---l~--~~~~~~~l~~~i~~ll~ 419 (461)
||.=.|. .++..++ .-+|+|.+|.... .-..+ .-+.+ . |+.+. ++ ...++.-+...|. -+.
T Consensus 80 --iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~ 154 (182)
T 1u11_A 80 --IIAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIVQMPG-GVPVGTLAIGASGAKNAALLAASIL-ALY 154 (182)
T ss_dssp --EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHCCCT-TSCCEECCSSHHHHHHHHHHHHHHH-GGG
T ss_pred --EEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCceEEEecCCccchHHHHHHHHHH-ccC
Confidence 7766553 3444444 5789999998542 11111 22223 2 44421 22 1244555554444 345
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhcC
Q 012543 420 DAEGREMRNRAAILKEKLDLCTKQG 444 (461)
Q Consensus 420 ~~~~~~~~~~a~~l~~~~~~~~~~~ 444 (461)
| +.++++.+..++++.+.+.+.
T Consensus 155 d---~~l~~kL~~~r~~~~~~v~~~ 176 (182)
T 1u11_A 155 N---PALAARLETWRALQTASVPNS 176 (182)
T ss_dssp C---HHHHHHHHHHHHHHHHHSCSS
T ss_pred C---HHHHHHHHHHHHHHHHHHHHh
Confidence 6 789999999999988766443
No 104
>2wam_A RV2714, conserved hypothetical alanine and leucine rich protein; unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=52.59 E-value=93 Score=28.74 Aligned_cols=144 Identities=14% Similarity=0.070 Sum_probs=72.7
Q ss_pred CeEEEEEccccccCC-HHHHHHHHHHHHhCCCceEEEECCCccCCchhcccCchhHHHHhcCCCceeeecChhhhhcCCC
Q 012543 274 KSVIYVSFGSIAAID-ETKFLEVAWGLANSKVPFLWVVRPGLVRGAEWIELLPRGFLEMLDGRGHIVKWAPQQEVLAHPA 352 (461)
Q Consensus 274 ~~~v~vs~Gs~~~~~-~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~~ 352 (461)
.+++++ .|-..... ..+...+++.+++.+.+-|+.+++-. ...|- ..+. .+.......+++....
T Consensus 142 ~~~LlL-~G~eP~~~w~~fa~~vl~~a~~~gV~~vvtLgglp-------~~vph----tRp~--~V~~~at~~el~~~~~ 207 (351)
T 2wam_A 142 TPFLLL-AGLEPDLKWERFITAVRLLAERLGVRQTIGLGTVP-------MAVPH----TRPI--TMTAHSNNRELISDFQ 207 (351)
T ss_dssp CEEEEE-EEECCSBCHHHHHHHHHHHHHHTTCCEEEEEEEEE-------ESCCT----TSCC--CEEEEESSGGGGTTSC
T ss_pred CcEEEE-ECCCChhHHHHHHHHHHHHHHHhCCCEEEEEeccc-------CCCCC----ccCc--ceEEEECCHHHHHhcC
Confidence 444444 56655533 46677788999999998877765521 11110 0000 1222233333443322
Q ss_pred C--CccccccCchHHHH--HhhcCCccccC----ccc-chh--hhhHH----HHHHhhhceeecCC---ccCHHHHHHHH
Q 012543 353 T--GAFWTHCGWNSTLE--SMCEGVPMICQ----PCH-GEQ--MVIAR----YVSDVWKVGLHLER---KLERGEVERAI 414 (461)
Q Consensus 353 ~--~~~I~HGG~gs~~e--al~~GvP~l~~----P~~-~DQ--~~na~----~v~~~lG~G~~l~~---~~~~~~l~~~i 414 (461)
. .-+---+|..++.+ +...|+|.+++ |.. .+- |.=|. .+.+. +|+.++. .-.++++.+.|
T Consensus 208 ~~~~~~~gp~GisglL~~~~~~~Gi~a~~l~~~vP~Yla~~pdP~AA~alL~~L~~l--lgl~ip~~~L~e~Ae~ie~~i 285 (351)
T 2wam_A 208 PSISEIQVPGSASNLLEYRMAQHGHEVVGFTVHVPHYLTQTDYPAAAQALLEQVAKT--GSLQLPLAVLAEAAAEVQAKI 285 (351)
T ss_dssp CCCCSEEEECCHHHHHHHHHHHTTCCEEEEEEEEEGGGTTSCCHHHHHHHHHHHHHH--HTCCCCCHHHHHHHHHHHHHH
T ss_pred CccCcccccccHHHHHHHHHHHcCCCEEEEEEeCCccccCCCCHHHHHHHHHHHHHH--HCCCCCHHHHHHHHHHHHHHH
Confidence 2 00222345444544 45689999887 442 221 33332 22332 3555554 45678888889
Q ss_pred HHHhcchhHHHHHHHHHHHHH
Q 012543 415 RRVMVDAEGREMRNRAAILKE 435 (461)
Q Consensus 415 ~~ll~~~~~~~~~~~a~~l~~ 435 (461)
+++.++. +.+.+-++.|-+
T Consensus 286 ~el~~~~--~e~~~~V~~LE~ 304 (351)
T 2wam_A 286 DEQVQAS--AEVAQVVAALER 304 (351)
T ss_dssp HHHHTTC--HHHHHHHHHHHH
T ss_pred HHHHHhC--HHHHHHHHHHHh
Confidence 9888742 344443334333
No 105
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=52.49 E-value=12 Score=31.00 Aligned_cols=39 Identities=10% Similarity=0.038 Sum_probs=31.2
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNS 54 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~ 54 (461)
+||++.-.|+.|=+ -...+.+.|+++|++|.++.++...
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~ 41 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSK 41 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGG
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHH
Confidence 37777776776666 6789999999999999999986443
No 106
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=51.53 E-value=20 Score=32.55 Aligned_cols=83 Identities=12% Similarity=-0.021 Sum_probs=49.0
Q ss_pred CeEEEEEccccccCCHHHHHHHHHHHHhCCCceEEEECCCccCCchhcccCchhHHHHhcCCCceeeecChhhhhcCCCC
Q 012543 274 KSVIYVSFGSIAAIDETKFLEVAWGLANSKVPFLWVVRPGLVRGAEWIELLPRGFLEMLDGRGHIVKWAPQQEVLAHPAT 353 (461)
Q Consensus 274 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~~~ 353 (461)
+-.++++--|-.....+.+..+...++..+..+.+..+... .+..+ +. .++....++
T Consensus 10 ~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~-----------~~a~~-------~~-----~~~~~~~d~ 66 (304)
T 3s40_A 10 KVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQ-----------GDATK-------YC-----QEFASKVDL 66 (304)
T ss_dssp SEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCST-----------THHHH-------HH-----HHHTTTCSE
T ss_pred EEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCc-----------chHHH-------HH-----HHhhcCCCE
Confidence 33455555433322345566777888887777655544321 11110 00 011124566
Q ss_pred CccccccCchHHHHHhh------cCCccccCccc
Q 012543 354 GAFWTHCGWNSTLESMC------EGVPMICQPCH 381 (461)
Q Consensus 354 ~~~I~HGG~gs~~eal~------~GvP~l~~P~~ 381 (461)
+|.-||-||+.|++. .++|+-++|..
T Consensus 67 --vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~G 98 (304)
T 3s40_A 67 --IIVFGGDGTVFECTNGLAPLEIRPTLAIIPGG 98 (304)
T ss_dssp --EEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred --EEEEccchHHHHHHHHHhhCCCCCcEEEecCC
Confidence 999999999999864 57899999963
No 107
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=51.51 E-value=20 Score=27.97 Aligned_cols=38 Identities=11% Similarity=0.080 Sum_probs=29.0
Q ss_pred CCeEEE-EcCC--CccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 14 GRRLIL-FPLP--FQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 14 ~~~il~-~~~~--~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
.+|++| ++.+ +.......+.+|....+.||+|+++-+.
T Consensus 15 ~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~ 55 (134)
T 3mc3_A 15 XXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMI 55 (134)
T ss_dssp CCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEe
Confidence 345555 4445 5667788888999999999999988775
No 108
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=51.32 E-value=8.4 Score=34.12 Aligned_cols=53 Identities=17% Similarity=0.195 Sum_probs=38.4
Q ss_pred CCCCCccccccCchHHHHHhhc---CCccccCcccchhhhhHHHHHHhhhceeecCCccCHHHHHHHHHHHhcc
Q 012543 350 HPATGAFWTHCGWNSTLESMCE---GVPMICQPCHGEQMVIARYVSDVWKVGLHLERKLERGEVERAIRRVMVD 420 (461)
Q Consensus 350 ~~~~~~~I~HGG~gs~~eal~~---GvP~l~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~l~~~i~~ll~~ 420 (461)
.+|+ +|.-||=||+.+++.. ++|++.++.. .+ |- +. .+.++++.+++++++++
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~G------------~~--Gf-l~-~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFKAG------------RL--GF-LT-SYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEESS------------SC--CS-SC-CBCGGGHHHHHHHHHTT
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEECC------------CC--Cc-cC-cCCHHHHHHHHHHHHcC
Confidence 4677 9999999999999876 8888888631 11 21 11 35678888888888765
No 109
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=50.47 E-value=12 Score=31.85 Aligned_cols=42 Identities=10% Similarity=0.143 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEeCCCCCC
Q 012543 13 KGRRLILFPLPFQGHINPMLQLANILYS-KGFSITIIHTKFNSP 55 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~p~l~La~~L~~-rGh~V~~~~~~~~~~ 55 (461)
+++||++...|+.+=+. ...+.+.|++ +|++|.++.++...+
T Consensus 18 ~~k~IllgvTGsiaa~k-~~~lv~~L~~~~g~~V~vv~T~~A~~ 60 (206)
T 1qzu_A 18 RKFHVLVGVTGSVAALK-LPLLVSKLLDIPGLEVAVVTTERAKH 60 (206)
T ss_dssp SSEEEEEEECSSGGGGT-HHHHHHHHC---CEEEEEEECTGGGG
T ss_pred CCCEEEEEEeChHHHHH-HHHHHHHHhcccCCEEEEEECHhHHH
Confidence 45688887778877554 5899999999 899999999974433
No 110
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=48.67 E-value=18 Score=29.82 Aligned_cols=75 Identities=8% Similarity=0.103 Sum_probs=41.8
Q ss_pred eeecCh-hh-hhcCCCCCccccccCchHHHHH---hhcCCccccCcccchhhhhHHHHHHhhhceeecCCccCHHHHHHH
Q 012543 339 VKWAPQ-QE-VLAHPATGAFWTHCGWNSTLES---MCEGVPMICQPCHGEQMVIARYVSDVWKVGLHLERKLERGEVERA 413 (461)
Q Consensus 339 ~~~vp~-~~-lL~~~~~~~~I~HGG~gs~~ea---l~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~l~~~ 413 (461)
++..+. .. +...++. .++--||.||.-|+ +.+++|++++|.+. .....+... -..... ..-+++++.+.
T Consensus 94 ~~~~~~Rk~~m~~~sda-~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~-~~~~i~-~~~~~~e~~~~ 167 (176)
T 2iz6_A 94 TGLGSARDNINALSSNV-LVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSL-DAGLVH-VAADVAGAIAA 167 (176)
T ss_dssp CCCCSSSCCCCGGGCSE-EEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHH-CTTTEE-EESSHHHHHHH
T ss_pred cCCHHHHHHHHHHhCCE-EEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChh-hcCeEE-EcCCHHHHHHH
Confidence 344454 22 3345554 56667899987665 66999999999843 111122221 111000 13477888777
Q ss_pred HHHHhc
Q 012543 414 IRRVMV 419 (461)
Q Consensus 414 i~~ll~ 419 (461)
+.+.+.
T Consensus 168 l~~~~~ 173 (176)
T 2iz6_A 168 VKQLLA 173 (176)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776654
No 111
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=48.67 E-value=1.1e+02 Score=24.97 Aligned_cols=139 Identities=14% Similarity=0.124 Sum_probs=74.4
Q ss_pred CeEEEEEccccccCCHHHHHHHHHHHHhCCCceEEEECCCccCCchhcccCchhHHHHhcCCCceeeecChhhhhcCCCC
Q 012543 274 KSVIYVSFGSIAAIDETKFLEVAWGLANSKVPFLWVVRPGLVRGAEWIELLPRGFLEMLDGRGHIVKWAPQQEVLAHPAT 353 (461)
Q Consensus 274 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~~~ 353 (461)
++.|-|-+||.+ +....+.....++..+.++-+.+.+-+ .+|+.+.+-.. ..--..+++
T Consensus 7 ~~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~SaH--------R~p~~~~~~~~-----------~a~~~g~~V 65 (174)
T 3lp6_A 7 RPRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSAH--------RTPEAMFSYAR-----------GAAARGLEV 65 (174)
T ss_dssp CCSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTT--------TCHHHHHHHHH-----------HHHHHTCCE
T ss_pred CCeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECCC--------CCHHHHHHHHH-----------HHHhCCCCE
Confidence 445666677755 456677888888888877655554432 25555422100 000123344
Q ss_pred CccccccCc----hHHHHHhhcCCccccCcccchhh-hhH--HHHHHhh--hceee--c-CCccCHHHHHHHHHHHhcch
Q 012543 354 GAFWTHCGW----NSTLESMCEGVPMICQPCHGEQM-VIA--RYVSDVW--KVGLH--L-ERKLERGEVERAIRRVMVDA 421 (461)
Q Consensus 354 ~~~I~HGG~----gs~~eal~~GvP~l~~P~~~DQ~-~na--~~v~~~l--G~G~~--l-~~~~~~~~l~~~i~~ll~~~ 421 (461)
||.=.|. .++..++ .-+|+|.+|...--. ... .-+.+ + |+.+. . +...++..+...|..+ .|
T Consensus 66 --iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlS~vq-mp~GvpVatV~I~~~~nAa~lAa~Il~~-~d- 139 (174)
T 3lp6_A 66 --IIAGAGGAAHLPGMVAAA-TPLPVIGVPVPLGRLDGLDSLLSIVQ-MPAGVPVATVSIGGAGNAGLLAVRMLGA-AN- 139 (174)
T ss_dssp --EEEEEESSCCHHHHHHHH-CSSCEEEEEECCSSGGGHHHHHHHHC-CCTTCCCEECCTTCHHHHHHHHHHHHHT-TC-
T ss_pred --EEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhh-CCCCCeeEEEEcCcchHHHHHHHHHHhC-CC-
Confidence 7776663 3444433 668999999753211 111 12222 2 32222 1 1234555555444433 45
Q ss_pred hHHHHHHHHHHHHHHHHHHh
Q 012543 422 EGREMRNRAAILKEKLDLCT 441 (461)
Q Consensus 422 ~~~~~~~~a~~l~~~~~~~~ 441 (461)
+.++++.+.+++++++.+
T Consensus 140 --~~l~~kl~~~r~~~~~~v 157 (174)
T 3lp6_A 140 --PQLRARIVAFQDRLADVV 157 (174)
T ss_dssp --HHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHHH
Confidence 688888888888887544
No 112
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=47.34 E-value=25 Score=30.41 Aligned_cols=26 Identities=31% Similarity=0.525 Sum_probs=21.0
Q ss_pred ccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012543 25 QGHINPMLQLANILYSKGFSITIIHTKF 52 (461)
Q Consensus 25 ~GHi~p~l~La~~L~~rGh~V~~~~~~~ 52 (461)
.|.+ -.++|++|.++|++|++++.+.
T Consensus 28 SG~m--G~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGHL--GKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCHH--HHHHHHHHHHTTCEEEEEECTT
T ss_pred CCHH--HHHHHHHHHHCCCEEEEEeCCc
Confidence 5543 4578999999999999998863
No 113
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=46.54 E-value=18 Score=27.77 Aligned_cols=32 Identities=31% Similarity=0.530 Sum_probs=23.8
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
.|+|+++.. |.+- ..+++.|.++||+|+++..
T Consensus 4 ~m~i~IiG~---G~iG--~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 4 GMYIIIAGI---GRVG--YTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp -CEEEEECC---SHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECC---CHHH--HHHHHHHHhCCCeEEEEEC
Confidence 468888843 5554 3578999999999999876
No 114
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=46.52 E-value=18 Score=24.92 Aligned_cols=48 Identities=15% Similarity=0.156 Sum_probs=33.1
Q ss_pred cCCccccCcccchhhh-hHHHHHHhhhceeecCC--ccCHHHHHHHHHHHhc
Q 012543 371 EGVPMICQPCHGEQMV-IARYVSDVWKVGLHLER--KLERGEVERAIRRVMV 419 (461)
Q Consensus 371 ~GvP~l~~P~~~DQ~~-na~~v~~~lG~G~~l~~--~~~~~~l~~~i~~ll~ 419 (461)
.|+|++++-..+-|.+ |-..-+. -.-|+..+- ...++++.+.+++.|.
T Consensus 50 ngkplvvfvngasqndvnefqnea-kkegvsydvlkstdpeeltqrvreflk 100 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQNEA-KKEGVSYDVLKSTDPEELTQRVREFLK 100 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHHHH-HHHTCEEEEEECCCHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHHHH-HhcCcchhhhccCCHHHHHHHHHHHHH
Confidence 6899998888777754 3333333 255555544 6788999998888774
No 115
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=46.11 E-value=50 Score=25.64 Aligned_cols=63 Identities=16% Similarity=0.183 Sum_probs=39.2
Q ss_pred cCCccccCcccchhhhhHHHHHHhhhceeecCCccCHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHH
Q 012543 371 EGVPMICQPCHGEQMVIARYVSDVWKVGLHLERKLERGEVERAIRRVMVDAEGREMRNRAAILKEKLD 438 (461)
Q Consensus 371 ~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~ 438 (461)
..+|+|++--..+. .......+ .|+--.+.+.++.++|..+|++++.. ..++...+++++.+.
T Consensus 74 ~~~pii~ls~~~~~-~~~~~~~~-~g~~~~l~kP~~~~~L~~~i~~~~~~---~~~~~~~~~~~~~~~ 136 (155)
T 1qkk_A 74 PDLPMILVTGHGDI-PMAVQAIQ-DGAYDFIAKPFAADRLVQSARRAEEK---RRLVMENRSLRRAAE 136 (155)
T ss_dssp TTSCEEEEECGGGH-HHHHHHHH-TTCCEEEESSCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCh-HHHHHHHh-cCCCeEEeCCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
Confidence 47888877654443 33334444 37655555568999999999999977 444444444444443
No 116
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=45.82 E-value=1.2e+02 Score=24.68 Aligned_cols=142 Identities=15% Similarity=0.110 Sum_probs=76.1
Q ss_pred CeEEEEEccccccCCHHHHHHHHHHHHhCCCceEEEECCCccCCchhcccCchhHHHHhcCCCceeeecChhhhhcCCCC
Q 012543 274 KSVIYVSFGSIAAIDETKFLEVAWGLANSKVPFLWVVRPGLVRGAEWIELLPRGFLEMLDGRGHIVKWAPQQEVLAHPAT 353 (461)
Q Consensus 274 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~~~ 353 (461)
++.|-|-+||.+ +....+.....++..+.++-+.+.+-+ .+|+.+.+-.. =.....+
T Consensus 12 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev~V~SaH--------R~p~~~~~~~~-------------~a~~~g~ 68 (174)
T 3kuu_A 12 GVKIAIVMGSKS--DWATMQFAADVLTTLNVPFHVEVVSAH--------RTPDRLFSFAE-------------QAEANGL 68 (174)
T ss_dssp CCCEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTT--------TCHHHHHHHHH-------------HTTTTTC
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEccc--------CCHHHHHHHHH-------------HHHhCCC
Confidence 344666677755 456677888888888877655555432 25555422110 0011122
Q ss_pred CccccccCch----HHHHHhhcCCccccCcccch-hhhhH--HHHHHhh--hceee---cCC--ccCHHHHHHHHHHHhc
Q 012543 354 GAFWTHCGWN----STLESMCEGVPMICQPCHGE-QMVIA--RYVSDVW--KVGLH---LER--KLERGEVERAIRRVMV 419 (461)
Q Consensus 354 ~~~I~HGG~g----s~~eal~~GvP~l~~P~~~D-Q~~na--~~v~~~l--G~G~~---l~~--~~~~~~l~~~i~~ll~ 419 (461)
++||.=.|.- ++..+ ..-+|+|.+|...- -.... .-+.+ + |+.+. ++. ..++..+...|.. +.
T Consensus 69 ~ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vq-mP~GvPVatV~I~~a~~~nAa~lAa~ILa-~~ 145 (174)
T 3kuu_A 69 HVIIAGNGGAAHLPGMLAA-KTLVPVLGVPVQSAALSGVDSLYSIVQ-MPRGIPVGTLAIGKAGAANAALLAAQILA-LH 145 (174)
T ss_dssp SEEEEEEESSCCHHHHHHH-TCSSCEEEEEECCTTTTTHHHHHHHHT-CCTTSCCEECCSSHHHHHHHHHHHHHHHH-TT
T ss_pred cEEEEECChhhhhHHHHHh-ccCCCEEEeeCCCCCCCCHHHHHHhhh-CCCCCeeEEEEeCCccchHHHHHHHHHHc-CC
Confidence 3377766633 33333 24689999998542 11222 22222 2 33211 111 1234444444443 35
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhcC
Q 012543 420 DAEGREMRNRAAILKEKLDLCTKQG 444 (461)
Q Consensus 420 ~~~~~~~~~~a~~l~~~~~~~~~~~ 444 (461)
| +.++++.+.+++++++.+.+.
T Consensus 146 d---~~l~~kl~~~r~~~~~~v~~~ 167 (174)
T 3kuu_A 146 D---TELAGRLAHWRQSQTDDVLDN 167 (174)
T ss_dssp C---HHHHHHHHHHHHHHHHHHHTC
T ss_pred C---HHHHHHHHHHHHHHHHHHHhC
Confidence 6 789999999999998766544
No 117
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=45.76 E-value=22 Score=31.43 Aligned_cols=38 Identities=24% Similarity=0.142 Sum_probs=32.6
Q ss_pred CCeEEEEcCC---CccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 14 GRRLILFPLP---FQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 14 ~~~il~~~~~---~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
.||.+|++.| +.|-=.-..+|+.-|++||++|+..=-+
T Consensus 22 ~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~D 62 (295)
T 2vo1_A 22 SMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKID 62 (295)
T ss_dssp CCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred cceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecc
Confidence 6789998876 6688888999999999999999997554
No 118
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=45.47 E-value=31 Score=32.10 Aligned_cols=38 Identities=16% Similarity=0.200 Sum_probs=24.5
Q ss_pred CeEEEEEccccccCCHHHHHHHHHHHHhCCCceEEEECCC
Q 012543 274 KSVIYVSFGSIAAIDETKFLEVAWGLANSKVPFLWVVRPG 313 (461)
Q Consensus 274 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~ 313 (461)
+++++.+.||-++..+ ...++++|.+.+++++|+....
T Consensus 3 ~~i~i~~GGTgGHi~p--alala~~L~~~g~~V~~vg~~~ 40 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFP--ALACAREFQARGYAVHWLGTPR 40 (365)
T ss_dssp CEEEEECCSSHHHHHH--HHHHHHHHHHTTCEEEEEECSS
T ss_pred CcEEEEcCCCHHHHHH--HHHHHHHHHhCCCEEEEEECCc
Confidence 4566666666443211 2357788988899999887554
No 119
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=45.26 E-value=40 Score=29.44 Aligned_cols=37 Identities=19% Similarity=0.259 Sum_probs=27.4
Q ss_pred CeEEEEcCCCcc-----------CHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 15 RRLILFPLPFQG-----------HINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 15 ~~il~~~~~~~G-----------Hi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
+||+++..+..+ ...=++.-...|.+.|++|+++++.
T Consensus 10 kkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~ 57 (247)
T 3n7t_A 10 RKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASET 57 (247)
T ss_dssp SEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 478887655321 2555677788999999999999984
No 120
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=44.99 E-value=1.2e+02 Score=24.31 Aligned_cols=131 Identities=16% Similarity=0.159 Sum_probs=69.0
Q ss_pred EEEEccccccCCHHHHHHHHHHHHhCCCceEEEECCCccCCchhcccCchhHHHHhcCCCceeeecChhhhhc--CCCCC
Q 012543 277 IYVSFGSIAAIDETKFLEVAWGLANSKVPFLWVVRPGLVRGAEWIELLPRGFLEMLDGRGHIVKWAPQQEVLA--HPATG 354 (461)
Q Consensus 277 v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~~lL~--~~~~~ 354 (461)
|-|-+||.+ +....+.....++..+.++=.-+.+- ..+|+.+.+ +.. ..++
T Consensus 2 V~Iimgs~S--D~~v~~~a~~~l~~~gi~~dv~V~sa--------HR~p~~~~~----------------~~~~a~~~V- 54 (157)
T 2ywx_A 2 ICIIMGSES--DLKIAEKAVNILKEFGVEFEVRVASA--------HRTPELVEE----------------IVKNSKADV- 54 (157)
T ss_dssp EEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTCHHHHHH----------------HHHHCCCSE-
T ss_pred EEEEEccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc--------cCCHHHHHH----------------HHHhcCCCE-
Confidence 344556544 45667778888888887765555443 225655522 111 1133
Q ss_pred ccccccCch----HHHHHhhcCCccccCcccchhhhhHHH--HHHhh--hceeec---CCccCHHHHHHHHHHHhcchhH
Q 012543 355 AFWTHCGWN----STLESMCEGVPMICQPCHGEQMVIARY--VSDVW--KVGLHL---ERKLERGEVERAIRRVMVDAEG 423 (461)
Q Consensus 355 ~~I~HGG~g----s~~eal~~GvP~l~~P~~~DQ~~na~~--v~~~l--G~G~~l---~~~~~~~~l~~~i~~ll~~~~~ 423 (461)
+|.=.|.- ++..++ .-+|+|.+|....-...... +.+ + |+.+.. +...++.-+...|. -++|
T Consensus 55 -iIa~AG~aa~Lpgvva~~-t~~PVIgVP~~~~l~G~daLlS~vq-mP~gvpVatV~I~~~~nAa~lA~~Il-~~~d--- 127 (157)
T 2ywx_A 55 -FIAIAGLAAHLPGVVASL-TTKPVIAVPVDAKLDGLDALLSSVQ-MPPGIPVATVGIDRGENAAILALEIL-ALKD--- 127 (157)
T ss_dssp -EEEEEESSCCHHHHHHTT-CSSCEEEEEECSSGGGHHHHHHHHS-CCTTSCCEECCTTCHHHHHHHHHHHH-TTTC---
T ss_pred -EEEEcCchhhhHHHHHhc-cCCCEEEecCCCccCcHHHHHHHhc-CCCCCeeEEEecCCcHHHHHHHHHHH-hcCC---
Confidence 66665532 333333 46888888883211111222 222 1 432211 12345555554444 3356
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 012543 424 REMRNRAAILKEKLDLCT 441 (461)
Q Consensus 424 ~~~~~~a~~l~~~~~~~~ 441 (461)
+.++++.+..++++++.+
T Consensus 128 ~~l~~kl~~~r~~~~~~v 145 (157)
T 2ywx_A 128 ENIAKKLIEYREKMKKKV 145 (157)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 688888888888887543
No 121
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=44.92 E-value=21 Score=26.76 Aligned_cols=43 Identities=16% Similarity=0.047 Sum_probs=28.1
Q ss_pred ccccccCCCCeEEEEcCCCccCHHHHH-HHHHHHHhCCCe-EEEE
Q 012543 6 ESHMQQKKGRRLILFPLPFQGHINPML-QLANILYSKGFS-ITII 48 (461)
Q Consensus 6 ~~~m~~~~~~~il~~~~~~~GHi~p~l-~La~~L~~rGh~-V~~~ 48 (461)
+.+|..++++||+++|..+.|.-.-.. .|-+.+.++|.+ +.+-
T Consensus 10 ~~~~~~~~~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~ 54 (110)
T 3czc_A 10 GQQMGRGSMVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESA 54 (110)
T ss_dssp --------CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred cccccccCCcEEEEECCCcHHHHHHHHHHHHHHHHHcCCCeEEEE
Confidence 445555566789999999999888777 677778888987 6543
No 122
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=44.74 E-value=17 Score=28.33 Aligned_cols=33 Identities=18% Similarity=0.229 Sum_probs=27.0
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
+.||+++.+|..| ..+|+.|.++||+|+++...
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 4689998876555 47899999999999998874
No 123
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=44.25 E-value=19 Score=32.86 Aligned_cols=23 Identities=9% Similarity=0.135 Sum_probs=20.0
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCC
Q 012543 30 PMLQLANILYSKGFSITIIHTKF 52 (461)
Q Consensus 30 p~l~La~~L~~rGh~V~~~~~~~ 52 (461)
.-.++|+++..+|++|+|++.+.
T Consensus 67 mG~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 67 RGATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETT
T ss_pred HHHHHHHHHHHCCCEEEEEecCC
Confidence 55688999999999999998863
No 124
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=43.99 E-value=1.3e+02 Score=25.84 Aligned_cols=105 Identities=3% Similarity=-0.073 Sum_probs=58.8
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCC-CCC--CCCCCCceEEEcCC-CCCCCcCCcccHHHHH
Q 012543 13 KGRRLILFPLPFQGHINPMLQLANILYSK--GFSITIIHTKFN-SPN--PSNYPHFTFCSIQD-GLSETEASTTDFVALI 86 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~p~l~La~~L~~r--Gh~V~~~~~~~~-~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 86 (461)
+++||+|+..|+. + -+.++.++|.+. +++|..+.+... ... .....|+.+..++. .+. + .
T Consensus 21 ~~~rI~~l~SG~g-~--~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~~~~-------~-r--- 86 (229)
T 3auf_A 21 HMIRIGVLISGSG-T--NLQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHMDPAAYP-------S-R--- 86 (229)
T ss_dssp TCEEEEEEESSCC-H--HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEECCGGGSS-------S-H---
T ss_pred CCcEEEEEEeCCc-H--HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEECccccc-------c-h---
Confidence 3469999876663 2 467788888876 688877665321 110 11235676665432 111 0 0
Q ss_pred HHHHHHcchhHHHHHHHHhhcccccCCCCccEEEeCCCc-hhhHHHHHHcCCCeEEEecc
Q 012543 87 SVLHVKCAAPFQDCLAKLLSNAEEKEEEPIACLITDASW-FFTHDVAESLKLPRIVLRSL 145 (461)
Q Consensus 87 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~pDlvi~D~~~-~~a~~~A~~lgiP~v~~~~~ 145 (461)
..... +.++.+.+ .+||++|+-.+. .....+-+.....++-+.++
T Consensus 87 ----~~~~~---~~~~~l~~-------~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 87 ----TAFDA---ALAERLQA-------YGVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp ----HHHHH---HHHHHHHH-------TTCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred ----hhccH---HHHHHHHh-------cCCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 01111 12333333 789999988654 43455556666677877666
No 125
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=43.96 E-value=1.3e+02 Score=29.48 Aligned_cols=33 Identities=21% Similarity=0.327 Sum_probs=24.3
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
.+|++++. +-.-.++|++-|.+.|.+|+.+.+.
T Consensus 364 GKrvaI~g-----d~~~~~~la~fL~elGm~vv~v~~~ 396 (523)
T 3u7q_B 364 GKRFALWG-----DPDFVMGLVKFLLELGCEPVHILCH 396 (523)
T ss_dssp TCEEEEEC-----SHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHcCCEEEEEEeC
Confidence 46788873 3345567888888899999988764
No 126
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=43.71 E-value=20 Score=31.36 Aligned_cols=39 Identities=23% Similarity=0.238 Sum_probs=30.7
Q ss_pred CCCeEEEE-cCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 13 KGRRLILF-PLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 13 ~~~~il~~-~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
+.+.|.|+ +-|+-|-..-...||..|+++|++|.++-.+
T Consensus 5 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D 44 (257)
T 1wcv_1 5 KVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLD 44 (257)
T ss_dssp CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECC
Confidence 33455554 3468899999999999999999999998765
No 127
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=43.21 E-value=98 Score=25.33 Aligned_cols=114 Identities=10% Similarity=-0.010 Sum_probs=63.3
Q ss_pred CeEEEEEccccccCCHHHHHHHHHHHHhCCCceEEEECCCccCCchhcccCchhHHHHhcCCCce---eeecChhhhhcC
Q 012543 274 KSVIYVSFGSIAAIDETKFLEVAWGLANSKVPFLWVVRPGLVRGAEWIELLPRGFLEMLDGRGHI---VKWAPQQEVLAH 350 (461)
Q Consensus 274 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~---~~~vp~~~lL~~ 350 (461)
+++++.-.|++... ....+++.|.+.+.++-++.+.... +++. +..+ +...+.++. ..|+++..+-..
T Consensus 6 k~IllgvTGs~aa~---k~~~ll~~L~~~g~~V~vv~T~~A~---~fi~--~~~l-~~l~~~v~~~~~~~~~~hi~l~~~ 76 (175)
T 3qjg_A 6 ENVLICLCGSVNSI---NISHYIIELKSKFDEVNVIASTNGR---KFIN--GEIL-KQFCDNYYDEFEDPFLNHVDIANK 76 (175)
T ss_dssp CEEEEEECSSGGGG---GHHHHHHHHTTTCSEEEEEECTGGG---GGSC--HHHH-HHHCSCEECTTTCTTCCHHHHHHT
T ss_pred CEEEEEEeCHHHHH---HHHHHHHHHHHCCCEEEEEECcCHH---HHhh--HHHH-HHhcCCEEecCCCCccccccccch
Confidence 56777777877753 2455677787778776556554421 1111 2222 222222221 134555556566
Q ss_pred CCCCccccccCchHHH-------------HHhhcCCccccCcccch-------hhhhHHHHHHhhhce
Q 012543 351 PATGAFWTHCGWNSTL-------------ESMCEGVPMICQPCHGE-------QMVIARYVSDVWKVG 398 (461)
Q Consensus 351 ~~~~~~I~HGG~gs~~-------------eal~~GvP~l~~P~~~D-------Q~~na~~v~~~lG~G 398 (461)
+|+ .+|-=+-.||+. -++..++|++++|-... -..|-.++.+ +|+=
T Consensus 77 aD~-~vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~-~G~~ 142 (175)
T 3qjg_A 77 HDK-IIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKD-YGVS 142 (175)
T ss_dssp CSE-EEEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHHHH-TTCE
T ss_pred hCE-EEEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHHHH-CCCE
Confidence 665 455556555543 34667999999994221 2356677777 4764
No 128
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=42.56 E-value=18 Score=31.26 Aligned_cols=29 Identities=21% Similarity=0.115 Sum_probs=24.4
Q ss_pred CCCCccccccCchHHHHHhhcCCccccCcccc
Q 012543 351 PATGAFWTHCGWNSTLESMCEGVPMICQPCHG 382 (461)
Q Consensus 351 ~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~ 382 (461)
+++ +|+.||.+.....- .++|+|-++..+
T Consensus 64 ~dV--IISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 64 CDA--IIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp CSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CeE--EEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 666 99999999988875 579999999753
No 129
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=42.42 E-value=26 Score=32.09 Aligned_cols=33 Identities=18% Similarity=0.130 Sum_probs=27.8
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
.+||.|+..|+.| +-++|+-|.++||+|+..-.
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 4599999999888 55699999999999998644
No 130
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=41.66 E-value=53 Score=28.17 Aligned_cols=146 Identities=12% Similarity=0.006 Sum_probs=72.8
Q ss_pred hcCCCCCCeEEEEEccccccCCHHHHHHHHHHHHhCCCceEEEECCCccCCchhcccCchhHHHHhc-CCCceeeecChh
Q 012543 267 RLDKQAPKSVIYVSFGSIAAIDETKFLEVAWGLANSKVPFLWVVRPGLVRGAEWIELLPRGFLEMLD-GRGHIVKWAPQQ 345 (461)
Q Consensus 267 ~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~~~~~~vp~~ 345 (461)
|++- .+++++.|..|.++ ...+..|.+.+..+.++.... .+.+.+... +++......-..
T Consensus 26 fl~L-~gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~~-----------~~~l~~l~~~~~i~~i~~~~~~ 86 (223)
T 3dfz_A 26 MLDL-KGRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPTV-----------SAEINEWEAKGQLRVKRKKVGE 86 (223)
T ss_dssp EECC-TTCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSSC-----------CHHHHHHHHTTSCEEECSCCCG
T ss_pred EEEc-CCCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCCC-----------CHHHHHHHHcCCcEEEECCCCH
Confidence 4443 35778888877433 444566667788876554321 122222111 233333222234
Q ss_pred hhhcCCCCCccccccCchHHHHHhhc----CCccccCcccchhhhhH-----HHHHHhhhceeecCC----ccCHHHHHH
Q 012543 346 EVLAHPATGAFWTHCGWNSTLESMCE----GVPMICQPCHGEQMVIA-----RYVSDVWKVGLHLER----KLERGEVER 412 (461)
Q Consensus 346 ~lL~~~~~~~~I~HGG~gs~~eal~~----GvP~l~~P~~~DQ~~na-----~~v~~~lG~G~~l~~----~~~~~~l~~ 412 (461)
..|..+++ +|.--|.-.+.+.++. |+|+-+ .|.|..+ ..+.+. ++-+.+++ ..-+..|++
T Consensus 87 ~dL~~adL--VIaAT~d~~~N~~I~~~ak~gi~VNv----vD~p~~~~f~~Paiv~rg-~l~iaIST~G~sP~la~~iR~ 159 (223)
T 3dfz_A 87 EDLLNVFF--IVVATNDQAVNKFVKQHIKNDQLVNM----ASSFSDGNIQIPAQFSRG-RLSLAISTDGASPLLTKRIKE 159 (223)
T ss_dssp GGSSSCSE--EEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEEEET-TEEEEEECTTSCHHHHHHHHH
T ss_pred hHhCCCCE--EEECCCCHHHHHHHHHHHhCCCEEEE----eCCcccCeEEEeeEEEeC-CEEEEEECCCCCcHHHHHHHH
Confidence 45677777 8888787666655553 555432 2433322 112221 23333333 233466666
Q ss_pred HHHHHhcchhHHHHHHHHHHHHHHHHH
Q 012543 413 AIRRVMVDAEGREMRNRAAILKEKLDL 439 (461)
Q Consensus 413 ~i~~ll~~~~~~~~~~~a~~l~~~~~~ 439 (461)
.|..++-. +...+-+.+.++++++++
T Consensus 160 ~ie~~lp~-~~~~~~~~~~~~R~~vk~ 185 (223)
T 3dfz_A 160 DLSSNYDE-SYTQYTQFLYECRVLIHR 185 (223)
T ss_dssp HHHHHSCT-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHccH-HHHHHHHHHHHHHHHHHH
Confidence 77766643 224566677777777764
No 131
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=41.53 E-value=15 Score=34.63 Aligned_cols=60 Identities=18% Similarity=0.330 Sum_probs=39.0
Q ss_pred ChhhhhcCCCCCccccccCchHHHHHhhc----CC-ccccCcccchhhhhHHHHHHhhhceeecCCccCHHHHHHHHHHH
Q 012543 343 PQQEVLAHPATGAFWTHCGWNSTLESMCE----GV-PMICQPCHGEQMVIARYVSDVWKVGLHLERKLERGEVERAIRRV 417 (461)
Q Consensus 343 p~~~lL~~~~~~~~I~HGG~gs~~eal~~----Gv-P~l~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~l~~~i~~l 417 (461)
+..++-..+|+ +|+-||=||+..|+.. ++ |++.+... ++ |- +. .+..+++.+++.++
T Consensus 107 ~~~~~~~~~Dl--VIvlGGDGTlL~aa~~~~~~~vpPiLGIN~G------------~l--GF-Lt-~~~~~~~~~al~~i 168 (388)
T 3afo_A 107 PEQDIVNRTDL--LVTLGGDGTILHGVSMFGNTQVPPVLAFALG------------TL--GF-LS-PFDFKEHKKVFQEV 168 (388)
T ss_dssp CHHHHHHHCSE--EEEEESHHHHHHHHHTTTTSCCCCEEEEECS------------SC--CS-SC-CEEGGGHHHHHHHH
T ss_pred chhhcccCCCE--EEEEeCcHHHHHHHHHhcccCCCeEEEEECC------------Cc--cc-CC-cCChHHHHHHHHHH
Confidence 33445567888 9999999999999653 67 78887531 01 11 11 34556677777777
Q ss_pred hcc
Q 012543 418 MVD 420 (461)
Q Consensus 418 l~~ 420 (461)
+++
T Consensus 169 l~g 171 (388)
T 3afo_A 169 ISS 171 (388)
T ss_dssp HTT
T ss_pred hcC
Confidence 664
No 132
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=41.47 E-value=45 Score=30.55 Aligned_cols=80 Identities=13% Similarity=-0.071 Sum_probs=47.7
Q ss_pred eEEEEEccccccCCHHHHHHHHHHHHhCCCceEEEECCCccCCchhcccCchhHHHHhcCCCceeeecChhhhhcCCCCC
Q 012543 275 SVIYVSFGSIAAIDETKFLEVAWGLANSKVPFLWVVRPGLVRGAEWIELLPRGFLEMLDGRGHIVKWAPQQEVLAHPATG 354 (461)
Q Consensus 275 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~~~~ 354 (461)
-.|+++.-+-.. +.+..+...++..+..+.+...... ....+ .. ...+-..+++
T Consensus 32 ~~vi~Np~sg~~---~~~~~i~~~l~~~g~~~~~~~t~~~-----------~~~~~------~~-----~~~~~~~~d~- 85 (332)
T 2bon_A 32 SLLILNGKSTDN---LPLREAIMLLREEGMTIHVRVTWEK-----------GDAAR------YV-----EEARKFGVAT- 85 (332)
T ss_dssp EEEEECSSSTTC---HHHHHHHHHHHTTTCCEEEEECCST-----------THHHH------HH-----HHHHHHTCSE-
T ss_pred EEEEECCCCCCC---chHHHHHHHHHHcCCcEEEEEecCc-----------chHHH------HH-----HHHHhcCCCE-
Confidence 345555433222 4566788888888877665544321 11100 00 1122234576
Q ss_pred ccccccCchHHHHHhh--------cCCccccCccc
Q 012543 355 AFWTHCGWNSTLESMC--------EGVPMICQPCH 381 (461)
Q Consensus 355 ~~I~HGG~gs~~eal~--------~GvP~l~~P~~ 381 (461)
+|.-||=||+.|++. .++|+.++|..
T Consensus 86 -vvv~GGDGTl~~v~~~l~~~~~~~~~plgiiP~G 119 (332)
T 2bon_A 86 -VIAGGGDGTINEVSTALIQCEGDDIPALGILPLG 119 (332)
T ss_dssp -EEEEESHHHHHHHHHHHHHCCSSCCCEEEEEECS
T ss_pred -EEEEccchHHHHHHHHHhhcccCCCCeEEEecCc
Confidence 999999999999853 57899899963
No 133
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=41.18 E-value=20 Score=30.93 Aligned_cols=37 Identities=16% Similarity=0.013 Sum_probs=32.6
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
|||+|..-|+-|=..-...||..|+++|++|.++-.+
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D 37 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGD 37 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEEC
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 5788877788899999999999999999999998775
No 134
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=40.56 E-value=25 Score=32.95 Aligned_cols=40 Identities=10% Similarity=0.096 Sum_probs=29.8
Q ss_pred ccccccCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 6 ESHMQQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 6 ~~~m~~~~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
+|+|.+ ++++|+++..+ .....++++++++|++|..+...
T Consensus 4 ~~pm~~-~~~~ili~g~g-----~~~~~~~~a~~~~G~~v~~~~~~ 43 (391)
T 1kjq_A 4 GTALRP-AATRVMLLGSG-----ELGKEVAIECQRLGVEVIAVDRY 43 (391)
T ss_dssp CCTTST-TCCEEEEESCS-----HHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCCCC-CCCEEEEECCC-----HHHHHHHHHHHHcCCEEEEEECC
Confidence 577774 45688888543 23577899999999999888764
No 135
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=40.52 E-value=43 Score=28.74 Aligned_cols=32 Identities=9% Similarity=0.123 Sum_probs=24.5
Q ss_pred CCccEEEeCCCchh-------hHHHHHHcCCCeEEEecc
Q 012543 114 EPIACLITDASWFF-------THDVAESLKLPRIVLRSL 145 (461)
Q Consensus 114 ~~pDlvi~D~~~~~-------a~~~A~~lgiP~v~~~~~ 145 (461)
.+||+|++|..... |..+...+++|+|.+.=+
T Consensus 102 ~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK~ 140 (225)
T 2w36_A 102 TKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAKS 140 (225)
T ss_dssp SCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEESS
T ss_pred CCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEec
Confidence 67999999976532 455777789999998644
No 136
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=40.35 E-value=1.7e+02 Score=25.32 Aligned_cols=37 Identities=11% Similarity=0.078 Sum_probs=25.5
Q ss_pred CeEEEEcCCCccCH-HHHHHHHHHHHhCCCeEEEEeCC
Q 012543 15 RRLILFPLPFQGHI-NPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 15 ~~il~~~~~~~GHi-~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
|||+++-.-+.-++ ..+...++.+..-|.+|.+.+.+
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~p~~~i~~~t~~ 39 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAAPGTEILAVCPR 39 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCCTTEEEEEECCS
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 56777665555444 56677888877678888887764
No 137
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=40.29 E-value=32 Score=31.31 Aligned_cols=33 Identities=18% Similarity=0.389 Sum_probs=27.6
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 13 KGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
+.++|.|+..|..| ..+|+.|.++||+|+++..
T Consensus 30 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 62 (320)
T 4dll_A 30 YARKITFLGTGSMG-----LPMARRLCEAGYALQVWNR 62 (320)
T ss_dssp CCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 46799999888777 6788999999999998754
No 138
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=39.99 E-value=19 Score=32.57 Aligned_cols=40 Identities=10% Similarity=0.204 Sum_probs=27.0
Q ss_pred cccccccCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 5 GESHMQQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 5 ~~~~m~~~~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
++|.|.. +.++|.|+..|..|+ .+|..|+++||+|+++..
T Consensus 7 ~~~~~~~-~~~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~ 46 (302)
T 1f0y_A 7 SASAKKI-IVKHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQ 46 (302)
T ss_dssp -----CC-CCCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred ccccccc-cCCEEEEECCCHHHH-----HHHHHHHhCCCeEEEEEC
Confidence 4566643 346899998877665 578889999999998654
No 139
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=39.65 E-value=32 Score=31.62 Aligned_cols=81 Identities=7% Similarity=-0.096 Sum_probs=47.6
Q ss_pred EEEEEccccccCCHHHHHHHHHHHHhCCCceEEEECCCccCCchhcccCchhHHHHhcCCCceeeecChhhhhcCCCCCc
Q 012543 276 VIYVSFGSIAAIDETKFLEVAWGLANSKVPFLWVVRPGLVRGAEWIELLPRGFLEMLDGRGHIVKWAPQQEVLAHPATGA 355 (461)
Q Consensus 276 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~ 355 (461)
.|+++..|-.....+.+..+...++..+..+.+...... ....+ .. .......+++
T Consensus 28 ~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~~-----------~~a~~------~~-----~~~~~~~~d~-- 83 (337)
T 2qv7_A 28 RIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKI-----------GDATL------EA-----ERAMHENYDV-- 83 (337)
T ss_dssp EEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCST-----------THHHH------HH-----HHHTTTTCSE--
T ss_pred EEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecCc-----------chHHH------HH-----HHHhhcCCCE--
Confidence 455554443222335567788888887766554443321 11100 00 1112234566
Q ss_pred cccccCchHHHHHhh------cCCccccCcc
Q 012543 356 FWTHCGWNSTLESMC------EGVPMICQPC 380 (461)
Q Consensus 356 ~I~HGG~gs~~eal~------~GvP~l~~P~ 380 (461)
+|.-||=||+.|++. .++|+.++|.
T Consensus 84 vvv~GGDGTv~~v~~~l~~~~~~~pl~iIP~ 114 (337)
T 2qv7_A 84 LIAAGGDGTLNEVVNGIAEKPNRPKLGVIPM 114 (337)
T ss_dssp EEEEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred EEEEcCchHHHHHHHHHHhCCCCCcEEEecC
Confidence 999999999999853 4789999996
No 140
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=39.57 E-value=40 Score=29.51 Aligned_cols=41 Identities=10% Similarity=0.047 Sum_probs=26.4
Q ss_pred cccccCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 7 SHMQQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 7 ~~m~~~~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
..|...-+.|+++++.++.| + -.++|++|.++|++|+++..
T Consensus 3 ~~m~~~l~~k~vlVTGas~g-I--G~aia~~l~~~G~~V~~~~r 43 (264)
T 3ucx_A 3 GSMGGLLTDKVVVISGVGPA-L--GTTLARRCAEQGADLVLAAR 43 (264)
T ss_dssp ----CTTTTCEEEEESCCTT-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCcCCCcCCcEEEEECCCcH-H--HHHHHHHHHHCcCEEEEEeC
Confidence 34554434567777755443 3 35789999999999988765
No 141
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=39.45 E-value=2e+02 Score=28.20 Aligned_cols=33 Identities=21% Similarity=0.383 Sum_probs=24.6
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
.+|++++. +-.-.++|++.|.+.|-+|..+...
T Consensus 360 Gkrv~i~g-----d~~~~~~la~~L~ElGm~vv~v~~~ 392 (519)
T 1qgu_B 360 GKKFGLYG-----DPDFVMGLTRFLLELGCEPTVILSH 392 (519)
T ss_dssp TCEEEEES-----CHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHCCCEEEEEEeC
Confidence 46888874 3445678888888899999987764
No 142
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=39.04 E-value=37 Score=28.37 Aligned_cols=45 Identities=20% Similarity=0.327 Sum_probs=33.3
Q ss_pred ccccccCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 6 ESHMQQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 6 ~~~m~~~~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
+|+|.-++.+.|++...++.|=-.-.-.|++.|...|++|..+..
T Consensus 1 ~~~m~~~~~~~I~l~G~~GsGKsT~~~~L~~~l~~~~~~v~~~~~ 45 (215)
T 1nn5_A 1 GSHMAARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRF 45 (215)
T ss_dssp ------CCCCEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEES
T ss_pred CccccccCCcEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEeeC
Confidence 356765667889999999999999999999999999999865543
No 143
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=39.01 E-value=1.9e+02 Score=26.91 Aligned_cols=89 Identities=7% Similarity=-0.004 Sum_probs=54.2
Q ss_pred CeEEEEcCCCcc-CHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCCCCCCCcCCcccHHHHHHHHHHHc
Q 012543 15 RRLILFPLPFQG-HINPMLQLANILYSKGFSITIIHTKFNSPNPSNYPHFTFCSIQDGLSETEASTTDFVALISVLHVKC 93 (461)
Q Consensus 15 ~~il~~~~~~~G-Hi~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (461)
..++++++|+.+ .-..+..+.+.|.+.|.+|.+.+............++.+..+- .
T Consensus 221 ~~~Vlv~~Gs~~~~~~~~~~~~~al~~~~~~vv~~~g~~~~~~~~~~~~v~~~~~~-----------~------------ 277 (404)
T 3h4t_A 221 SPPVYVGFGSGPAPAEAARVAIEAVRAQGRRVVLSSGWAGLGRIDEGDDCLVVGEV-----------N------------ 277 (404)
T ss_dssp SCCEEECCTTSCCCTTHHHHHHHHHHHTTCCEEEECTTTTCCCSSCCTTEEEESSC-----------C------------
T ss_pred CCeEEEECCCCCCcHHHHHHHHHHHHhCCCEEEEEeCCcccccccCCCCEEEecCC-----------C------------
Confidence 356788888887 4555677888888889999887764322211112333333110 0
Q ss_pred chhHHHHHHHHhhcccccCCCCccEEEeCCCchhhHHHHHHcCCCeEEE
Q 012543 94 AAPFQDCLAKLLSNAEEKEEEPIACLITDASWFFTHDVAESLKLPRIVL 142 (461)
Q Consensus 94 ~~~~~~~~~~l~~~~~~~~~~~pDlvi~D~~~~~a~~~A~~lgiP~v~~ 142 (461)
. .++.. +.|++|+..... ...-|-..|+|.+.+
T Consensus 278 ------~-~~ll~--------~~d~~v~~gG~~-t~~Eal~~GvP~v~~ 310 (404)
T 3h4t_A 278 ------H-QVLFG--------RVAAVVHHGGAG-TTTAVTRAGAPQVVV 310 (404)
T ss_dssp ------H-HHHGG--------GSSEEEECCCHH-HHHHHHHHTCCEEEC
T ss_pred ------H-HHHHh--------hCcEEEECCcHH-HHHHHHHcCCCEEEc
Confidence 0 12222 279999996652 444566789999986
No 144
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=38.72 E-value=43 Score=25.75 Aligned_cols=37 Identities=14% Similarity=0.064 Sum_probs=26.5
Q ss_pred EEEEcCCCcc--CHHHHHHHHHHHHhCCCeE-EEEeCCCC
Q 012543 17 LILFPLPFQG--HINPMLQLANILYSKGFSI-TIIHTKFN 53 (461)
Q Consensus 17 il~~~~~~~G--Hi~p~l~La~~L~~rGh~V-~~~~~~~~ 53 (461)
+++++.+-+| .....+.+|..+.+.||+| .++-....
T Consensus 4 ~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~dG 43 (130)
T 2hy5_A 4 ALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHDG 43 (130)
T ss_dssp EEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGGG
T ss_pred EEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEechH
Confidence 3445555554 4567789999999999999 87766433
No 145
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=38.69 E-value=1.1e+02 Score=25.93 Aligned_cols=103 Identities=8% Similarity=0.059 Sum_probs=55.1
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCC--eEEEEeCCCCCC-C--CCCCCCceEEEcCC-CCCCCcCCcccHHHHHHH
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGF--SITIIHTKFNSP-N--PSNYPHFTFCSIQD-GLSETEASTTDFVALISV 88 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh--~V~~~~~~~~~~-~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 88 (461)
+||+|+..|+. .-+.++.++|.+.+| +|..+.+..... . .....|+.+..++. .+. +
T Consensus 2 ~rI~vl~SG~g---~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~~~~-------~------- 64 (216)
T 2ywr_A 2 LKIGVLVSGRG---SNLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKHNVECKVIQRKEFP-------S------- 64 (216)
T ss_dssp EEEEEEECSCC---HHHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHHTCCEEECCGGGSS-------S-------
T ss_pred CEEEEEEeCCc---HHHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHcCCCEEEeCccccc-------c-------
Confidence 38888866554 247788888988888 776655532111 0 01124555554431 110 0
Q ss_pred HHHHcchhHHHHHHHHhhcccccCCCCccEEEeCCCc-hhhHHHHHHcCCCeEEEecc
Q 012543 89 LHVKCAAPFQDCLAKLLSNAEEKEEEPIACLITDASW-FFTHDVAESLKLPRIVLRSL 145 (461)
Q Consensus 89 ~~~~~~~~~~~~~~~l~~~~~~~~~~~pDlvi~D~~~-~~a~~~A~~lgiP~v~~~~~ 145 (461)
...... +.++.+.+ .+||++|+-.+. .....+-+.....++-+.++
T Consensus 65 -r~~~~~---~~~~~l~~-------~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 65 -KKEFEE---RMALELKK-------KGVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp -HHHHHH---HHHHHHHH-------TTCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred -hhhhhH---HHHHHHHh-------cCCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 011111 12333333 789999987654 33444555556667777666
No 146
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=38.17 E-value=40 Score=26.62 Aligned_cols=36 Identities=17% Similarity=0.218 Sum_probs=30.1
Q ss_pred eE-EEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 16 RL-ILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 16 ~i-l~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
++ +++..+..-.+++.+.+|...++.|++|+++.+.
T Consensus 9 kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~ 45 (144)
T 2qs7_A 9 KLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTF 45 (144)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEeh
Confidence 44 4456677888999999999999999999998884
No 147
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=38.11 E-value=35 Score=29.37 Aligned_cols=35 Identities=11% Similarity=0.081 Sum_probs=24.3
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
+.+.++++.++ |-+ -.++++.|.++|++|+++...
T Consensus 6 ~~k~vlVTGas-~gI--G~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 6 EARRVLVYGGR-GAL--GSRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp CCCEEEEETTT-SHH--HHHHHHHHHTTTCEEEEEESS
T ss_pred CCCEEEEECCC-cHH--HHHHHHHHHhCCCEEEEEeCC
Confidence 34556666443 333 357899999999999987653
No 148
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=38.10 E-value=2.7e+02 Score=26.42 Aligned_cols=139 Identities=12% Similarity=0.042 Sum_probs=70.7
Q ss_pred CCeEEEEEccccccCCHHHHHHHHHHHHhCCCceEEEECCCccCCchhcccCchhHHHHhcCCCceeeecChhhhhcCC-
Q 012543 273 PKSVIYVSFGSIAAIDETKFLEVAWGLANSKVPFLWVVRPGLVRGAEWIELLPRGFLEMLDGRGHIVKWAPQQEVLAHP- 351 (461)
Q Consensus 273 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~- 351 (461)
..+.|-|-+||.+ +....+.....++..+.++-.-+.+-+ .+|+.+.+-.. +. -=...
T Consensus 264 ~~~~V~Ii~gs~S--D~~~~~~a~~~l~~~gi~~~v~V~saH--------R~p~~~~~~~~----------~~-~~~g~~ 322 (425)
T 2h31_A 264 SQCRVVVLMGSTS--DLGHCEKIKKACGNFGIPCELRVTSAH--------KGPDETLRIKA----------EY-EGDGIP 322 (425)
T ss_dssp CCCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTT--------TCHHHHHHHHH----------HH-HTTCCC
T ss_pred CCCeEEEEecCcc--cHHHHHHHHHHHHHcCCceEEeeeecc--------CCHHHHHHHHH----------HH-HHCCCC
Confidence 3456777777765 456677788888888877655554432 25555422110 00 00112
Q ss_pred CCCccccccCc----hHHHHHhhcCCccccCcccchhhhhHHHHH--H--hhhceeecCC-ccCHHHHHHHHHHHhcchh
Q 012543 352 ATGAFWTHCGW----NSTLESMCEGVPMICQPCHGEQMVIARYVS--D--VWKVGLHLER-KLERGEVERAIRRVMVDAE 422 (461)
Q Consensus 352 ~~~~~I~HGG~----gs~~eal~~GvP~l~~P~~~DQ~~na~~v~--~--~lG~G~~l~~-~~~~~~l~~~i~~ll~~~~ 422 (461)
++ +|.=+|. .++..++ .-+|+|.+|....-......+. + . |+.+..-. ..++.-++..|. -++|
T Consensus 323 ~v--iIa~AG~~a~Lpgvva~~-t~~PVIgvP~~~~~~G~daLls~vqmp~-g~pvatv~~~~nAa~~A~~Il-~~~~-- 395 (425)
T 2h31_A 323 TV--FVAVAGRSNGLGPVMSGN-TAYPVISCPPLTPDWGVQDVWSSLRLPS-GLGCSTVLSPEGSAQFAAQIF-GLSN-- 395 (425)
T ss_dssp EE--EEEECCSSCCHHHHHHHH-CSSCEEECCCCCTTTHHHHGGGTSSCCS-SCCCEECCCHHHHHHHHHHHH-HTTC--
T ss_pred eE--EEEEcCcccchHhHHhcc-CCCCEEEeeCccccccHHHHHHHhcCCC-CCceEEecCchHHHHHHHHHH-ccCC--
Confidence 23 6665553 2444444 4789999998421111111111 1 1 22221111 234444444444 3456
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 012543 423 GREMRNRAAILKEKLDLC 440 (461)
Q Consensus 423 ~~~~~~~a~~l~~~~~~~ 440 (461)
+.++++.+..+..+...
T Consensus 396 -~~l~~kl~~~~~~~~~~ 412 (425)
T 2h31_A 396 -HLVWSKLRASILNTWIS 412 (425)
T ss_dssp -HHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHH
Confidence 67777777777766643
No 149
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=38.01 E-value=20 Score=27.67 Aligned_cols=32 Identities=13% Similarity=0.191 Sum_probs=23.5
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
++|+++..|..| ..+++.|.++|++|+++...
T Consensus 7 ~~v~I~G~G~iG-----~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGLGRFG-----GSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CSEEEECCSHHH-----HHHHHHHHHTTCCCEEEESC
T ss_pred CcEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 478877644333 46789999999999988763
No 150
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=38.01 E-value=14 Score=35.90 Aligned_cols=100 Identities=15% Similarity=0.079 Sum_probs=52.9
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEcCC--CCCCCc---CCcccHHHHHH
Q 012543 13 KGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSPNPSNYPHFTFCSIQD--GLSETE---ASTTDFVALIS 87 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~ 87 (461)
++++-+|++. .+=.-++.+|+.|.+.|+++. ++......+ +..|+.+..+.+ ++|+.. ..+..+.-.-.
T Consensus 8 ~~i~~aLISV---sDK~glvelAk~L~~lGfeI~--ATgGTak~L-~e~GI~v~~V~~vTgfPEil~GRVKTLHP~ihgG 81 (523)
T 3zzm_A 8 RPIRRALISV---YDKTGLVDLAQGLSAAGVEII--STGSTAKTI-ADTGIPVTPVEQLTGFPEVLDGRVKTLHPRVHAG 81 (523)
T ss_dssp CCCCEEEEEE---SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHH-HTTTCCCEEHHHHHSCCCCTTTTSSSCSHHHHHH
T ss_pred ccccEEEEEE---eccccHHHHHHHHHHCCCEEE--EcchHHHHH-HHcCCceeeccccCCCchhhCCccccCCchhhhh
Confidence 3344444443 344558899999999999986 332111111 125777777753 555544 34444433333
Q ss_pred HHHHHcchhHHHHHHHHhhcccccCCCCccEEEeCCCc
Q 012543 88 VLHVKCAAPFQDCLAKLLSNAEEKEEEPIACLITDASW 125 (461)
Q Consensus 88 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~pDlvi~D~~~ 125 (461)
.+.+ ....+.++++.+..- ...|+||++..-
T Consensus 82 iLa~---r~~~~h~~~l~~~~i----~~iDlVvvNLYP 112 (523)
T 3zzm_A 82 LLAD---LRKSEHAAALEQLGI----EAFELVVVNLYP 112 (523)
T ss_dssp HHCC---TTSHHHHHHHHHHTC----CCCSEEEEECCC
T ss_pred hccC---CCCHHHHHHHHHCCC----CceeEEEEeCCC
Confidence 3221 222333344443322 679999999443
No 151
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=37.90 E-value=27 Score=32.19 Aligned_cols=40 Identities=20% Similarity=0.128 Sum_probs=33.2
Q ss_pred CCCCeEEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 12 KKGRRLILFP-LPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 12 ~~~~~il~~~-~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
++.++|+|++ -|+-|-..-...+|..|+++|++|.++..+
T Consensus 13 ~~~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D 53 (334)
T 3iqw_A 13 QRSLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTD 53 (334)
T ss_dssp CTTCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECC
T ss_pred CCCeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECC
Confidence 3445665554 489999999999999999999999999986
No 152
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=37.53 E-value=35 Score=25.37 Aligned_cols=38 Identities=11% Similarity=0.044 Sum_probs=27.1
Q ss_pred eEEE-EcCC--CccCHHHHHHHHHHHHhC-CC-eEEEEeCCCC
Q 012543 16 RLIL-FPLP--FQGHINPMLQLANILYSK-GF-SITIIHTKFN 53 (461)
Q Consensus 16 ~il~-~~~~--~~GHi~p~l~La~~L~~r-Gh-~V~~~~~~~~ 53 (461)
|+++ ++.+ +.......+.+|..+.+. || +|.++-....
T Consensus 3 k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~dg 45 (117)
T 1jx7_A 3 KIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDA 45 (117)
T ss_dssp EEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECGGG
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEchH
Confidence 4544 4444 345567789999999999 99 9988777533
No 153
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=37.43 E-value=29 Score=31.48 Aligned_cols=32 Identities=16% Similarity=0.212 Sum_probs=26.6
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
+|+|+++..+ ....++++++++||+|.++...
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~ 33 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSS 33 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECC
Confidence 3689888866 5678999999999999998774
No 154
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=37.35 E-value=1.6e+02 Score=24.90 Aligned_cols=103 Identities=6% Similarity=0.035 Sum_probs=57.1
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCC-CCCC--CCCCCCceEEEcCC-CCCCCcCCcccHHHHHHH
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSK--GFSITIIHTKF-NSPN--PSNYPHFTFCSIQD-GLSETEASTTDFVALISV 88 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~r--Gh~V~~~~~~~-~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 88 (461)
+||+++..|+.+ -+.++.++|.+. +|+|..+.+.. .... .....|+.+..++. .+. +-
T Consensus 4 ~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~~~~~-------~~------ 67 (212)
T 3av3_A 4 KRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFSPKDYP-------SK------ 67 (212)
T ss_dssp EEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECCGGGSS-------SH------
T ss_pred cEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCccccc-------ch------
Confidence 388887766543 366777888877 78998776642 1111 01224666655432 111 00
Q ss_pred HHHHcchhHHHHHHHHhhcccccCCCCccEEEeCCCc-hhhHHHHHHcCCCeEEEecc
Q 012543 89 LHVKCAAPFQDCLAKLLSNAEEKEEEPIACLITDASW-FFTHDVAESLKLPRIVLRSL 145 (461)
Q Consensus 89 ~~~~~~~~~~~~~~~l~~~~~~~~~~~pDlvi~D~~~-~~a~~~A~~lgiP~v~~~~~ 145 (461)
..... +.++.+.+ .+||++|.-.+. .....+-+.....++-+.++
T Consensus 68 --~~~~~---~~~~~l~~-------~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 68 --AAFES---EILRELKG-------RQIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp --HHHHH---HHHHHHHH-------TTCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred --hhhHH---HHHHHHHh-------cCCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 01111 12333333 789999987654 44455556666677877666
No 155
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=36.20 E-value=35 Score=27.35 Aligned_cols=35 Identities=14% Similarity=0.133 Sum_probs=28.8
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
..+++++..|. | +-|++++++.|.++|.+|+++ ..
T Consensus 23 ~~~~llIaGG~-G-ItPl~sm~~~l~~~~~~v~l~-g~ 57 (158)
T 3lrx_A 23 FGKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HV 57 (158)
T ss_dssp CSEEEEEEETT-H-HHHHHHHHHHHHHHTCEEEEE-EE
T ss_pred CCeEEEEEccC-c-HHHHHHHHHHHHhcCCcEEEE-Ee
Confidence 46888887544 4 999999999999999999998 53
No 156
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=35.95 E-value=1.7e+02 Score=23.48 Aligned_cols=137 Identities=12% Similarity=0.077 Sum_probs=71.5
Q ss_pred eEEEEEccccccCCHHHHHHHHHHHHhCCCceEEEECCCccCCchhcccCchhHHHHhcCCCceeeecChhhhhcCC-CC
Q 012543 275 SVIYVSFGSIAAIDETKFLEVAWGLANSKVPFLWVVRPGLVRGAEWIELLPRGFLEMLDGRGHIVKWAPQQEVLAHP-AT 353 (461)
Q Consensus 275 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~-~~ 353 (461)
+.|-|-+||.+ +....+.....++..+.++-..+.+-+ .+|+.+.+-.+ . .... .+
T Consensus 3 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~saH--------R~p~~~~~~~~----------~---a~~~~~~ 59 (159)
T 3rg8_A 3 PLVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSAH--------KTAEHVVSMLK----------E---YEALDRP 59 (159)
T ss_dssp CEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCTT--------TCHHHHHHHHH----------H---HHTSCSC
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEccc--------CCHHHHHHHHH----------H---hhhcCCC
Confidence 34666667655 456677788888888877655554432 25555422100 0 0111 23
Q ss_pred CccccccCc----hHHHHHhhcCCccccCcccch---hhhhHHHHHHhh--hceeec-CCccCHHHHHHHHHHHhcchhH
Q 012543 354 GAFWTHCGW----NSTLESMCEGVPMICQPCHGE---QMVIARYVSDVW--KVGLHL-ERKLERGEVERAIRRVMVDAEG 423 (461)
Q Consensus 354 ~~~I~HGG~----gs~~eal~~GvP~l~~P~~~D---Q~~na~~v~~~l--G~G~~l-~~~~~~~~l~~~i~~ll~~~~~ 423 (461)
++||.=.|. .++..++ .-+|+|.+|...- -.+ -.-+.+ + |+.+.- +...++..+...|.. ++|
T Consensus 60 ~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~d-LlS~vq-mp~GvpVatv~~~~nAa~lA~~Il~-~~d--- 132 (159)
T 3rg8_A 60 KLYITIAGRSNALSGFVDGF-VKGATIACPPPSDSFAGAD-IYSSLR-MPSGISPALVLEPKNAALLAARIFS-LYD--- 132 (159)
T ss_dssp EEEEEECCSSCCHHHHHHHH-SSSCEEECCCCCCGGGGTH-HHHHHC-CCTTCCCEECCSHHHHHHHHHHHHT-TTC---
T ss_pred cEEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCcc-HHHHHh-CCCCCceEEecCchHHHHHHHHHHh-CCC---
Confidence 337776663 2344333 5689999996431 122 122222 2 333221 223444444444432 345
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 012543 424 REMRNRAAILKEKLDLCT 441 (461)
Q Consensus 424 ~~~~~~a~~l~~~~~~~~ 441 (461)
+.++++.+..++++.+.+
T Consensus 133 ~~l~~kl~~~r~~~~~~v 150 (159)
T 3rg8_A 133 KEIADSVKSYMESNAQKI 150 (159)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 688888888888777433
No 157
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=35.91 E-value=35 Score=34.03 Aligned_cols=39 Identities=8% Similarity=0.054 Sum_probs=36.0
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 13 KGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
++.+|++.+.++-.|-....-++..|..+|++|..++..
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~ 135 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVM 135 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSS
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCC
Confidence 467999999999999999999999999999999998774
No 158
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=35.69 E-value=26 Score=32.81 Aligned_cols=31 Identities=23% Similarity=0.231 Sum_probs=25.5
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
|||+|+..|--| +.+|..|+++|++|+++=-
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~Er 32 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIYER 32 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEEec
Confidence 789998776555 7788999999999999743
No 159
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=35.60 E-value=46 Score=29.81 Aligned_cols=43 Identities=21% Similarity=0.185 Sum_probs=29.3
Q ss_pred cccccccCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 5 GESHMQQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 5 ~~~~m~~~~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
+++.|...-+.|++++|.++.| =-.++|+.|.++|++|.++..
T Consensus 18 ~p~~m~~~l~gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~~ 60 (299)
T 3t7c_A 18 GPGSMAGKVEGKVAFITGAARG---QGRSHAITLAREGADIIAIDV 60 (299)
T ss_dssp ----CCCTTTTCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCcccccccCCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEec
Confidence 4556776655677888866543 236789999999999998765
No 160
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=35.47 E-value=43 Score=30.97 Aligned_cols=39 Identities=23% Similarity=0.257 Sum_probs=32.7
Q ss_pred CCeEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012543 14 GRRLILFPL-PFQGHINPMLQLANILYSKGFSITIIHTKF 52 (461)
Q Consensus 14 ~~~il~~~~-~~~GHi~p~l~La~~L~~rGh~V~~~~~~~ 52 (461)
.++|+|++. |+-|-..-...||..|+++|++|.++..+.
T Consensus 25 ~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 64 (349)
T 3ug7_A 25 GTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDP 64 (349)
T ss_dssp SCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCT
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 346655544 788999999999999999999999999864
No 161
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=35.45 E-value=46 Score=29.50 Aligned_cols=41 Identities=15% Similarity=0.102 Sum_probs=28.0
Q ss_pred cccccCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 7 SHMQQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 7 ~~m~~~~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
..|..+-+.|++++|.++.| + -.++|+.|.++|++|+++..
T Consensus 3 ~~m~~~l~~k~~lVTGas~g-I--G~aia~~la~~G~~V~~~~~ 43 (286)
T 3uve_A 3 GSMTGRVEGKVAFVTGAARG-Q--GRSHAVRLAQEGADIIAVDI 43 (286)
T ss_dssp ---CCTTTTCEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCcccCCCEEEEeCCCch-H--HHHHHHHHHHCCCeEEEEec
Confidence 34655545577788865543 2 46889999999999998765
No 162
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=34.84 E-value=33 Score=31.42 Aligned_cols=39 Identities=15% Similarity=0.085 Sum_probs=26.5
Q ss_pred HHHHHhhcccccCCCCccEEEeCCCchhhHHHHHHcCCCeEEEecc
Q 012543 100 CLAKLLSNAEEKEEEPIACLITDASWFFTHDVAESLKLPRIVLRSL 145 (461)
Q Consensus 100 ~~~~l~~~~~~~~~~~pDlvi~D~~~~~a~~~A~~lgiP~v~~~~~ 145 (461)
.+|.++. .+||+||..........--++.|||++.+.+.
T Consensus 108 n~E~i~a-------l~PDLIi~~~~~~~~~~~L~~~gipvv~~~~~ 146 (335)
T 4hn9_A 108 NTEACVA-------ATPDVVFLPMKLKKTADTLESLGIKAVVVNPE 146 (335)
T ss_dssp CHHHHHH-------TCCSEEEEEGGGHHHHHHHHHTTCCEEEECCC
T ss_pred CHHHHHh-------cCCCEEEEeCcchhHHHHHHHcCCCEEEEcCC
Confidence 4566766 78999998754322333446779999998543
No 163
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=34.68 E-value=15 Score=33.14 Aligned_cols=32 Identities=9% Similarity=-0.089 Sum_probs=25.8
Q ss_pred hhcCCCCCccccccCchHHHHHhh----cCCccccCcc
Q 012543 347 VLAHPATGAFWTHCGWNSTLESMC----EGVPMICQPC 380 (461)
Q Consensus 347 lL~~~~~~~~I~HGG~gs~~eal~----~GvP~l~~P~ 380 (461)
+-..+|+ +|.-||=||+.+++. .++|++.++.
T Consensus 60 ~~~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 60 IGQQADL--AVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HHHHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred cccCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 3345687 999999999999975 3889988873
No 164
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=34.31 E-value=1.7e+02 Score=28.06 Aligned_cols=26 Identities=19% Similarity=0.298 Sum_probs=22.0
Q ss_pred CCccEEEeCCCchhhHHHHHHcCCCeEEE
Q 012543 114 EPIACLITDASWFFTHDVAESLKLPRIVL 142 (461)
Q Consensus 114 ~~pDlvi~D~~~~~a~~~A~~lgiP~v~~ 142 (461)
.+||++|.+.. ...+|+++|||++.+
T Consensus 384 ~~pDl~ig~~~---~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 384 EGVDLLISNTY---GKFIAREENIPFVRF 409 (458)
T ss_dssp SCCSEEEESGG---GHHHHHHHTCCEEEC
T ss_pred cCCCEEEeCcc---hHHHHHHcCCCEEEe
Confidence 67999998853 577889999999985
No 165
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=34.30 E-value=35 Score=29.94 Aligned_cols=38 Identities=24% Similarity=0.151 Sum_probs=31.2
Q ss_pred CCCeEEEEcCC---CccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 13 KGRRLILFPLP---FQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 13 ~~~~il~~~~~---~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
.+||.+|++.| +.|-=.-..+|+.-|++||++|+..=-
T Consensus 21 ~~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~Ki 61 (294)
T 2c5m_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKI 61 (294)
T ss_dssp CCCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEE
T ss_pred eceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEec
Confidence 35788888876 567778889999999999999998544
No 166
>2a3d_A Protein (de novo three-helix bundle); NMR {Synthetic construct} SCOP: k.9.1.1
Probab=34.10 E-value=44 Score=21.21 Aligned_cols=31 Identities=26% Similarity=0.289 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012543 424 REMRNRAAILKEKLDLCTKQGSSSYQSLENLISYI 458 (461)
Q Consensus 424 ~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l~~~l 458 (461)
..++++...++.+++ ..|+++..+..+.+.|
T Consensus 5 aefkqrlaaiktrlq----alggseaelaafekei 35 (73)
T 2a3d_A 5 AEFKQRLAAIKTRLQ----ALGGSEAELAAFEKEI 35 (73)
T ss_dssp HHHHHHHHHHHHHHH----HCSSGGGTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH----HhcCcHHHHHHHHHHH
Confidence 358888888888888 5677766555555443
No 167
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=34.02 E-value=44 Score=28.90 Aligned_cols=32 Identities=16% Similarity=0.157 Sum_probs=25.0
Q ss_pred CCccEEEeCCCch-------hhHHHHHHcCCCeEEEecc
Q 012543 114 EPIACLITDASWF-------FTHDVAESLKLPRIVLRSL 145 (461)
Q Consensus 114 ~~pDlvi~D~~~~-------~a~~~A~~lgiP~v~~~~~ 145 (461)
.+||++++|.... -|..+.-.+++|+|.+.=+
T Consensus 106 ~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVAKs 144 (237)
T 3goc_A 106 CPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVAKN 144 (237)
T ss_dssp SCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEESS
T ss_pred CCCCEEEEeCceeecCCCcchhheeeeecCCCEEeeecc
Confidence 6799999997542 3566788889999998633
No 168
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=33.96 E-value=33 Score=30.81 Aligned_cols=32 Identities=16% Similarity=0.352 Sum_probs=26.2
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
.++|.|+..|..|. .+|+.|.++||+|+++..
T Consensus 3 m~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~d~ 34 (302)
T 2h78_A 3 MKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (302)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCEEEEEeecHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 45999998877774 678999999999998754
No 169
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=33.79 E-value=14 Score=34.43 Aligned_cols=33 Identities=9% Similarity=0.016 Sum_probs=26.0
Q ss_pred hhhhhcCCCCCccccccCchHHHHHhh----cCCccccC
Q 012543 344 QQEVLAHPATGAFWTHCGWNSTLESMC----EGVPMICQ 378 (461)
Q Consensus 344 ~~~lL~~~~~~~~I~HGG~gs~~eal~----~GvP~l~~ 378 (461)
..++-..+|+ +|+=||=||++.|.. .++|++.+
T Consensus 102 ~~~~~~~~Dl--vI~lGGDGT~L~aa~~~~~~~~PvlGi 138 (365)
T 3pfn_A 102 YDDISNQIDF--IICLGGDGTLLYASSLFQGSVPPVMAF 138 (365)
T ss_dssp TCCCTTTCSE--EEEESSTTHHHHHHHHCSSSCCCEEEE
T ss_pred hhhcccCCCE--EEEEcChHHHHHHHHHhccCCCCEEEE
Confidence 3445567888 999999999999976 35788766
No 170
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=33.69 E-value=30 Score=26.45 Aligned_cols=30 Identities=20% Similarity=0.109 Sum_probs=20.2
Q ss_pred CCccEEEeCCCch--hhHHHH---HHcCCCeEEEe
Q 012543 114 EPIACLITDASWF--FTHDVA---ESLKLPRIVLR 143 (461)
Q Consensus 114 ~~pDlvi~D~~~~--~a~~~A---~~lgiP~v~~~ 143 (461)
.+||+||.|...+ -|..++ +..++|+|.++
T Consensus 52 ~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 52 GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 7899999997553 234444 34588877654
No 171
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=33.52 E-value=39 Score=29.34 Aligned_cols=37 Identities=8% Similarity=-0.024 Sum_probs=25.9
Q ss_pred HHHHHhhcccccCCCCccEEEeCCCch--hhHHHHHHcCCCeEEEe
Q 012543 100 CLAKLLSNAEEKEEEPIACLITDASWF--FTHDVAESLKLPRIVLR 143 (461)
Q Consensus 100 ~~~~l~~~~~~~~~~~pDlvi~D~~~~--~a~~~A~~lgiP~v~~~ 143 (461)
.+|++.. .+||+||...... ....--+..|||++.+.
T Consensus 51 n~E~i~~-------l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 51 NAEGILA-------MKPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp CHHHHHT-------TCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred CHHHHHc-------cCCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 3566666 7899999986542 23344467799999874
No 172
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=33.50 E-value=46 Score=28.34 Aligned_cols=35 Identities=20% Similarity=0.305 Sum_probs=24.5
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 13 KGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
+.|+|+++ |+.|.+- ..|+++|.++||+|+.++..
T Consensus 20 ~~~~ilVt--GatG~iG--~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 20 QGMRVLVV--GANGKVA--RYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp -CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCCeEEEE--CCCChHH--HHHHHHHHhCCCeEEEEECC
Confidence 35666655 4445443 46789999999999998764
No 173
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=33.36 E-value=33 Score=30.03 Aligned_cols=42 Identities=21% Similarity=0.290 Sum_probs=29.4
Q ss_pred cccCCCCeEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 9 MQQKKGRRLILFPL-PFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 9 m~~~~~~~il~~~~-~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
|..++.+.|+|+.. |+-|=..-...||..|+ +|++|.++-.+
T Consensus 22 ~~~~~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D 64 (267)
T 3k9g_A 22 MDNKKPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDMD 64 (267)
T ss_dssp ----CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEEC
T ss_pred CCCCCCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEECC
Confidence 44333344444333 68899999999999999 99999998765
No 174
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=33.23 E-value=52 Score=28.88 Aligned_cols=42 Identities=14% Similarity=0.236 Sum_probs=27.0
Q ss_pred cccccCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 7 SHMQQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 7 ~~m~~~~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
+.|...-+.|++++|.++.| + -.++|++|.++|++|+++...
T Consensus 3 ~~m~~~l~~k~vlVTGas~g-I--G~aia~~l~~~G~~V~~~~r~ 44 (271)
T 3tzq_B 3 GSMTAELENKVAIITGACGG-I--GLETSRVLARAGARVVLADLP 44 (271)
T ss_dssp ----CTTTTCEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEECT
T ss_pred CCCCcCCCCCEEEEECCCcH-H--HHHHHHHHHHCCCEEEEEcCC
Confidence 34554444577777755543 2 357899999999999987653
No 175
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=32.86 E-value=14 Score=33.67 Aligned_cols=32 Identities=9% Similarity=-0.018 Sum_probs=24.3
Q ss_pred hhcCCCCCccccccCchHHHHHhhc----CCccccCcc
Q 012543 347 VLAHPATGAFWTHCGWNSTLESMCE----GVPMICQPC 380 (461)
Q Consensus 347 lL~~~~~~~~I~HGG~gs~~eal~~----GvP~l~~P~ 380 (461)
....+|+ +|.-||-||+.+++.. ++|++.++.
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 4456777 9999999999999764 899988874
No 176
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=32.86 E-value=72 Score=25.00 Aligned_cols=36 Identities=19% Similarity=0.327 Sum_probs=25.3
Q ss_pred eEEEEcCCCccCHHH--HHHHHHHHHhCCCeE-EEEeCC
Q 012543 16 RLILFPLPFQGHINP--MLQLANILYSKGFSI-TIIHTK 51 (461)
Q Consensus 16 ~il~~~~~~~GHi~p--~l~La~~L~~rGh~V-~~~~~~ 51 (461)
-+++++.+-+|+-.. .+.+|+++.+.||+| .++-..
T Consensus 15 ~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~ 53 (140)
T 2d1p_A 15 FAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYR 53 (140)
T ss_dssp EEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred EEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEec
Confidence 445566666665544 467799999999999 766554
No 177
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=32.74 E-value=87 Score=23.55 Aligned_cols=62 Identities=8% Similarity=-0.004 Sum_probs=35.9
Q ss_pred cCCccccCcccchhhhhHHHHHHhhhceeecCCccCHHHHHHHHHHHhcchhHHHHHHHHHHHHHH
Q 012543 371 EGVPMICQPCHGEQMVIARYVSDVWKVGLHLERKLERGEVERAIRRVMVDAEGREMRNRAAILKEK 436 (461)
Q Consensus 371 ~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~ 436 (461)
..+|+|++-...|.......+.. .|+--.+.+.++.++|..+|++++.. .......+++...
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~~~-~ga~~~l~KP~~~~~L~~~i~~~~~~---~~~~~~~~~~~~~ 132 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAIND-AGIHQFLTKPWHPEQLLSSARNAARM---FTLARENERLSLE 132 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHHHH-TTCCEEEESSCCHHHHHHHHHHHHHH---HHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHh-hchhhhccCCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHH
Confidence 35677776544444443444443 24533444458999999999999866 3333433444333
No 178
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=32.71 E-value=80 Score=22.60 Aligned_cols=34 Identities=9% Similarity=0.044 Sum_probs=24.4
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 13 KGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
+..+|++++..+ ......+..|.+.||+|..+..
T Consensus 55 ~~~~ivvyC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (100)
T 3foj_A 55 DNETYYIICKAG----GRSAQVVQYLEQNGVNAVNVEG 88 (100)
T ss_dssp TTSEEEEECSSS----HHHHHHHHHHHTTTCEEEEETT
T ss_pred CCCcEEEEcCCC----chHHHHHHHHHHCCCCEEEecc
Confidence 345788877443 3466788999999998887644
No 179
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=32.55 E-value=69 Score=28.85 Aligned_cols=37 Identities=5% Similarity=-0.085 Sum_probs=28.8
Q ss_pred CCeEEEEcCCCcc-C---HHHHHHHHHHHHhCCCeEEEEeC
Q 012543 14 GRRLILFPLPFQG-H---INPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 14 ~~~il~~~~~~~G-H---i~p~l~La~~L~~rGh~V~~~~~ 50 (461)
++||+++..|..+ | +.....++++|.++||+|..+.+
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~ 53 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDP 53 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeC
Confidence 5789888865333 2 34678999999999999999875
No 180
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=32.52 E-value=35 Score=31.17 Aligned_cols=37 Identities=8% Similarity=0.209 Sum_probs=23.5
Q ss_pred cCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 11 QKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 11 ~~~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
..++++|+++ |+.|.+-. .|++.|.++||+|+.+...
T Consensus 16 ~~~~~~vlVt--GatG~iG~--~l~~~L~~~G~~V~~~~r~ 52 (347)
T 4id9_A 16 PRGSHMILVT--GSAGRVGR--AVVAALRTQGRTVRGFDLR 52 (347)
T ss_dssp -----CEEEE--TTTSHHHH--HHHHHHHHTTCCEEEEESS
T ss_pred ccCCCEEEEE--CCCChHHH--HHHHHHHhCCCEEEEEeCC
Confidence 3345666655 45555543 6789999999999998763
No 181
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=32.51 E-value=44 Score=29.08 Aligned_cols=34 Identities=24% Similarity=0.211 Sum_probs=25.1
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
.+|.++++.++ |-+ -.+++++|.++|++|+++..
T Consensus 6 ~~k~vlVTGas-~gI--G~~~a~~l~~~G~~v~~~~~ 39 (264)
T 3i4f_A 6 FVRHALITAGT-KGL--GKQVTEKLLAKGYSVTVTYH 39 (264)
T ss_dssp CCCEEEETTTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred ccCEEEEeCCC-chh--HHHHHHHHHHCCCEEEEEcC
Confidence 45777787544 333 35889999999999998755
No 182
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=32.44 E-value=66 Score=23.67 Aligned_cols=41 Identities=24% Similarity=0.222 Sum_probs=0.0
Q ss_pred HHHHHHHhhcccccCCCCccEEEeCCCc--hhhHHHHHHc-------CCCeEEEecc
Q 012543 98 QDCLAKLLSNAEEKEEEPIACLITDASW--FFTHDVAESL-------KLPRIVLRSL 145 (461)
Q Consensus 98 ~~~~~~l~~~~~~~~~~~pDlvi~D~~~--~~a~~~A~~l-------giP~v~~~~~ 145 (461)
.+.++.+.+ .+||+||.|... ..+..+++.+ ++|.+.++..
T Consensus 36 ~~al~~l~~-------~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~ 85 (122)
T 3gl9_A 36 QIALEKLSE-------FTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAK 85 (122)
T ss_dssp HHHHHHHTT-------BCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESC
T ss_pred HHHHHHHHh-------cCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecC
No 183
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=32.23 E-value=69 Score=28.13 Aligned_cols=43 Identities=19% Similarity=0.191 Sum_probs=27.5
Q ss_pred cccccccCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 5 GESHMQQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 5 ~~~~m~~~~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
+++.|...-+.|++++|.++.| + -.++|+.|.++|++|+++..
T Consensus 18 gp~~m~~~l~~k~~lVTGas~G-I--G~aia~~la~~G~~V~~~~r 60 (270)
T 3ftp_A 18 GPGSMDKTLDKQVAIVTGASRG-I--GRAIALELARRGAMVIGTAT 60 (270)
T ss_dssp -----CCTTTTCEEEETTCSSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCcccccCCCCCEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEeC
Confidence 4455655545678888855442 3 35789999999999988765
No 184
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=32.06 E-value=46 Score=30.00 Aligned_cols=29 Identities=17% Similarity=0.413 Sum_probs=25.5
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012543 16 RLILFPLPFQGHINPMLQLANILYSKGFSITIIH 49 (461)
Q Consensus 16 ~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~ 49 (461)
||.|+-.|.-|. ++|+.|.++||+|+++-
T Consensus 5 kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~d 33 (300)
T 3obb_A 5 QIAFIGLGHMGA-----PMATNLLKAGYLLNVFD 33 (300)
T ss_dssp EEEEECCSTTHH-----HHHHHHHHTTCEEEEEC
T ss_pred EEEEeeehHHHH-----HHHHHHHhCCCeEEEEc
Confidence 999999998884 78999999999999863
No 185
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=31.74 E-value=17 Score=18.68 Aligned_cols=17 Identities=24% Similarity=0.583 Sum_probs=14.4
Q ss_pred CchHHHHHhhcCCcccc
Q 012543 361 GWNSTLESMCEGVPMIC 377 (461)
Q Consensus 361 G~gs~~eal~~GvP~l~ 377 (461)
|.|++.-.+..|.|.++
T Consensus 1 giGa~LKVLa~~LP~li 17 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALI 17 (26)
T ss_pred CchHHHHHHHccchHHH
Confidence 67888999999999875
No 186
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=31.73 E-value=56 Score=28.76 Aligned_cols=46 Identities=15% Similarity=0.146 Sum_probs=30.0
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEc
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSPNPSNYPHFTFCSI 68 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~ 68 (461)
+|+|+++ |+ |-+ -..|++.|.++||+|+.++..... . ..+++++..
T Consensus 3 ~~~ilVt--Ga-G~i--G~~l~~~L~~~g~~V~~~~r~~~~--~--~~~~~~~~~ 48 (286)
T 3gpi_A 3 LSKILIA--GC-GDL--GLELARRLTAQGHEVTGLRRSAQP--M--PAGVQTLIA 48 (286)
T ss_dssp CCCEEEE--CC-SHH--HHHHHHHHHHTTCCEEEEECTTSC--C--CTTCCEEEC
T ss_pred CCcEEEE--CC-CHH--HHHHHHHHHHCCCEEEEEeCCccc--c--ccCCceEEc
Confidence 3577776 34 644 347889999999999998764221 1 245666654
No 187
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=31.64 E-value=2e+02 Score=23.16 Aligned_cols=142 Identities=11% Similarity=0.074 Sum_probs=76.2
Q ss_pred CeEEEEEccccccCCHHHHHHHHHHHHhCCCceEEEECCCccCCchhcccCchhHHHHhcCCCceeeecChhhhhcCCCC
Q 012543 274 KSVIYVSFGSIAAIDETKFLEVAWGLANSKVPFLWVVRPGLVRGAEWIELLPRGFLEMLDGRGHIVKWAPQQEVLAHPAT 353 (461)
Q Consensus 274 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~~~ 353 (461)
+|.|-|-+||.+ +....+.....++..+..+-+.+.+-+ ..|+.+.+. ..-+....+
T Consensus 5 ~p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~SaH--------Rtp~~l~~~-------------~~~~~~~g~ 61 (166)
T 3oow_A 5 SVQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVVSAH--------RTPDKMFDY-------------AETAKERGL 61 (166)
T ss_dssp CEEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCTT--------TCHHHHHHH-------------HHHTTTTTC
T ss_pred CCeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcCc--------CCHHHHHHH-------------HHHHHhCCC
Confidence 355777777755 456677888888888876655554432 255554221 111111223
Q ss_pred CccccccCch----HHHHHhhcCCccccCcccchhh-hhH--HHHHHhh--hceeecCC-----ccCHHHHHHHHHHHhc
Q 012543 354 GAFWTHCGWN----STLESMCEGVPMICQPCHGEQM-VIA--RYVSDVW--KVGLHLER-----KLERGEVERAIRRVMV 419 (461)
Q Consensus 354 ~~~I~HGG~g----s~~eal~~GvP~l~~P~~~DQ~-~na--~~v~~~l--G~G~~l~~-----~~~~~~l~~~i~~ll~ 419 (461)
++||.=.|.- ++..+ ..-+|+|.+|...... ... .-+.+ + |+++..-. ..++..+...|.. +.
T Consensus 62 ~ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vq-mp~gvpVatV~I~~ag~~nAa~lAa~Il~-~~ 138 (166)
T 3oow_A 62 KVIIAGAGGAAHLPGMVAA-KTTLPVLGVPVKSSTLNGQDSLLSIVQ-MPAGIPVATFAIGMAGAKNAALFAASILQ-HT 138 (166)
T ss_dssp CEEEEEECSSCCHHHHHHH-TCSSCEEEEECCCTTTTTHHHHHHHHT-CCTTSCCEECCSTHHHHHHHHHHHHHHHG-GG
T ss_pred cEEEEECCcchhhHHHHHh-ccCCCEEEeecCcCCCCCHHHHHHHhc-CCCCCceEEEecCCccchHHHHHHHHHHc-CC
Confidence 3488766633 33333 2468999999853211 111 11222 2 33322211 1233333333332 34
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhcC
Q 012543 420 DAEGREMRNRAAILKEKLDLCTKQG 444 (461)
Q Consensus 420 ~~~~~~~~~~a~~l~~~~~~~~~~~ 444 (461)
| +.++++.+.+++++++.+.+.
T Consensus 139 d---~~l~~kl~~~r~~~~~~v~~~ 160 (166)
T 3oow_A 139 D---INIAKALAEFRAEQTRFVLEN 160 (166)
T ss_dssp C---HHHHHHHHHHHHHHHHHHHTC
T ss_pred C---HHHHHHHHHHHHHHHHHHHhc
Confidence 6 789999999999998766443
No 188
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=31.60 E-value=34 Score=31.56 Aligned_cols=36 Identities=19% Similarity=0.213 Sum_probs=24.4
Q ss_pred HHHHhhcccccCCCCccEEEeCCCch-hhHHHHHHcCCCeEEEe
Q 012543 101 LAKLLSNAEEKEEEPIACLITDASWF-FTHDVAESLKLPRIVLR 143 (461)
Q Consensus 101 ~~~l~~~~~~~~~~~pDlvi~D~~~~-~a~~~A~~lgiP~v~~~ 143 (461)
+|+++. .+||+||...... ....+.+.+|||+|.+.
T Consensus 89 ~E~Ila-------l~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~ 125 (346)
T 2etv_A 89 LESLIT-------LQPDVVFITYVDRXTAXDIQEXTGIPVVVLS 125 (346)
T ss_dssp HHHHHH-------HCCSEEEEESCCHHHHHHHHHHHTSCEEEEC
T ss_pred HHHHhc-------CCCCEEEEeCCccchHHHHHHhcCCcEEEEe
Confidence 456665 6799999875432 12335677899999974
No 189
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=31.55 E-value=1.3e+02 Score=22.29 Aligned_cols=38 Identities=11% Similarity=0.112 Sum_probs=29.6
Q ss_pred CCCeEEEEcCCCccCHHH-HHHHHHHHHhCCCeEEEEeC
Q 012543 13 KGRRLILFPLPFQGHINP-MLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~p-~l~La~~L~~rGh~V~~~~~ 50 (461)
+++||+++|..+.|.-.- .-.|-+.+.++|.++.+-..
T Consensus 20 ~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~~ 58 (113)
T 1tvm_A 20 SKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQC 58 (113)
T ss_dssp SSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred cccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEEe
Confidence 456899999999998874 66777888889998755443
No 190
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=31.48 E-value=1.7e+02 Score=28.78 Aligned_cols=26 Identities=8% Similarity=-0.164 Sum_probs=21.0
Q ss_pred CCccEEEeCCCchhhHHHHHHcCCCeEEE
Q 012543 114 EPIACLITDASWFFTHDVAESLKLPRIVL 142 (461)
Q Consensus 114 ~~pDlvi~D~~~~~a~~~A~~lgiP~v~~ 142 (461)
.+||++|... ....+|+++|||++.+
T Consensus 455 ~~pDl~ig~~---~~~~~a~k~gIP~~~~ 480 (533)
T 1mio_A 455 LKPDMFFAGI---KEKFVIQKGGVLSKQL 480 (533)
T ss_dssp HCCSEEEECH---HHHHHHHHTTCEEEET
T ss_pred cCCCEEEccc---chhHHHHhcCCCEEEe
Confidence 6799999763 3577899999999864
No 191
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=31.31 E-value=65 Score=28.91 Aligned_cols=29 Identities=21% Similarity=0.472 Sum_probs=24.8
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012543 16 RLILFPLPFQGHINPMLQLANILYSKGFSITIIH 49 (461)
Q Consensus 16 ~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~ 49 (461)
||.|+..|.-| .++|+.|.++||+|+++-
T Consensus 7 kIgfIGLG~MG-----~~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 7 KIAFLGLGNLG-----TPIAEILLEAGYELVVWN 35 (297)
T ss_dssp EEEEECCSTTH-----HHHHHHHHHTTCEEEEC-
T ss_pred cEEEEecHHHH-----HHHHHHHHHCCCeEEEEe
Confidence 89999998877 478999999999999854
No 192
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=31.17 E-value=50 Score=26.71 Aligned_cols=36 Identities=17% Similarity=0.378 Sum_probs=28.4
Q ss_pred CCeEEEEcCCCcc-----CHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 14 GRRLILFPLPFQG-----HINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 14 ~~~il~~~~~~~G-----Hi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
..+|+++| ++| --++...|++.|.++|.+|.|+.++
T Consensus 23 A~~ViIvP--GYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 63 (180)
T 1pno_A 23 ASKVIIVP--GYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 63 (180)
T ss_dssp CSEEEEEE--CHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCeEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 45777776 343 2357889999999999999999996
No 193
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=30.95 E-value=61 Score=28.83 Aligned_cols=38 Identities=8% Similarity=-0.051 Sum_probs=27.4
Q ss_pred CCeEEEEcCCCc-cCHH---HHHHHHHHHHhCCCeEEEEeCC
Q 012543 14 GRRLILFPLPFQ-GHIN---PMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 14 ~~~il~~~~~~~-GHi~---p~l~La~~L~~rGh~V~~~~~~ 51 (461)
+++|+++..+.. -|-. ....++++|.++||+|.++...
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 368888875432 2322 4468999999999999998764
No 194
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=30.92 E-value=58 Score=27.21 Aligned_cols=36 Identities=11% Similarity=0.123 Sum_probs=29.7
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
..++++.+|..|+-.....+++.|.++|+.|...-.
T Consensus 32 ~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 32 LPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 456777778888888899999999999999887654
No 195
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=30.75 E-value=51 Score=28.85 Aligned_cols=38 Identities=11% Similarity=0.142 Sum_probs=29.1
Q ss_pred CCCCeEEEEc-C-CCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012543 12 KKGRRLILFP-L-PFQGHINPMLQLANILYSKGFSITIIH 49 (461)
Q Consensus 12 ~~~~~il~~~-~-~~~GHi~p~l~La~~L~~rGh~V~~~~ 49 (461)
+++|+.+|++ . ...|-..-.+.|++.|+++|++|.++=
T Consensus 23 ~~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fK 62 (251)
T 3fgn_A 23 QSHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCK 62 (251)
T ss_dssp CSSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Confidence 3445544443 3 467899999999999999999999874
No 196
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=30.72 E-value=70 Score=27.99 Aligned_cols=44 Identities=16% Similarity=0.098 Sum_probs=27.8
Q ss_pred ccccccccCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 4 LGESHMQQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 4 ~~~~~m~~~~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
..++-|..+-+.|+++++.++.| + -.++|++|.++|++|.+...
T Consensus 7 ~~~~~~~~~l~~k~~lVTGas~g-I--G~aia~~l~~~G~~V~~~~~ 50 (270)
T 3is3_A 7 ASETYIPGRLDGKVALVTGSGRG-I--GAAVAVHLGRLGAKVVVNYA 50 (270)
T ss_dssp ----CCTTCCTTCEEEESCTTSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred cccccCCCCcCCCEEEEECCCch-H--HHHHHHHHHHCCCEEEEEcC
Confidence 34444444445577788855443 3 35789999999999998654
No 197
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=30.62 E-value=59 Score=28.66 Aligned_cols=42 Identities=26% Similarity=0.145 Sum_probs=25.5
Q ss_pred ccccccCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 6 ESHMQQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 6 ~~~m~~~~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
++.|.-.-+.|.+++|.++.| + -.++|+.|.++|++|.++..
T Consensus 2 p~~m~~~l~~k~vlVTGas~g-I--G~aia~~l~~~G~~V~~~~r 43 (281)
T 3svt_A 2 PGSMQLSFQDRTYLVTGGGSG-I--GKGVAAGLVAAGASVMIVGR 43 (281)
T ss_dssp ------CCTTCEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCCccCcCCCEEEEeCCCcH-H--HHHHHHHHHHCCCEEEEEeC
Confidence 345554434566777755443 3 35789999999999998765
No 198
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=30.44 E-value=52 Score=26.72 Aligned_cols=36 Identities=19% Similarity=0.304 Sum_probs=28.2
Q ss_pred CCeEEEEcCCCcc-----CHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 14 GRRLILFPLPFQG-----HINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 14 ~~~il~~~~~~~G-----Hi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
..+|+++|. +| --++...|++.|.++|.+|.|+.++
T Consensus 22 A~~ViIvPG--YGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 62 (184)
T 1d4o_A 22 ANSIIITPG--YGLCAAKAQYPIADLVKMLSEQGKKVRFGIHP 62 (184)
T ss_dssp CSEEEEEEC--HHHHHTTTHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCeEEEECC--hHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 357777763 33 2357889999999999999999996
No 199
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=30.39 E-value=33 Score=29.67 Aligned_cols=33 Identities=24% Similarity=0.255 Sum_probs=27.4
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 13 KGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
.+|+|.|+..|..|- +||+.|+++||+|+.+..
T Consensus 5 ~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSS
T ss_pred CCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecC
Confidence 357999999998874 589999999999997655
No 200
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=30.33 E-value=2.2e+02 Score=23.07 Aligned_cols=139 Identities=14% Similarity=0.143 Sum_probs=72.6
Q ss_pred CeEEEEEccccccCCHHHHHHHHHHHHhCCCceEEEECCCccCCchhcccCchhHHHHhcCCCceeeecChhhhhcCCCC
Q 012543 274 KSVIYVSFGSIAAIDETKFLEVAWGLANSKVPFLWVVRPGLVRGAEWIELLPRGFLEMLDGRGHIVKWAPQQEVLAHPAT 353 (461)
Q Consensus 274 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~~~ 353 (461)
++.|-|-+||.+ +....+.....++..+.++-+.+.+-+ .+|+.+.+-.. . .--..+++
T Consensus 6 ~~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~SaH--------R~p~~~~~~~~----------~-a~~~g~~V 64 (169)
T 3trh_A 6 KIFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILSAH--------RTPKETVEFVE----------N-ADNRGCAV 64 (169)
T ss_dssp CCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTT--------TSHHHHHHHHH----------H-HHHTTEEE
T ss_pred CCcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEccc--------CCHHHHHHHHH----------H-HHhCCCcE
Confidence 445666677755 456677888888888877655555432 25555422100 0 00012334
Q ss_pred CccccccCch----HHHHHhhcCCccccCcccc-hhhhhHHH--HHHhh--hceee---cCC--ccCHHHHHHHHHHHhc
Q 012543 354 GAFWTHCGWN----STLESMCEGVPMICQPCHG-EQMVIARY--VSDVW--KVGLH---LER--KLERGEVERAIRRVMV 419 (461)
Q Consensus 354 ~~~I~HGG~g----s~~eal~~GvP~l~~P~~~-DQ~~na~~--v~~~l--G~G~~---l~~--~~~~~~l~~~i~~ll~ 419 (461)
||.=.|.- ++..+ ..-+|+|.+|... +-...... +.+ + |+.+. ++. ..++..+...|.. ++
T Consensus 65 --iIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vq-mp~GvPVatV~I~~a~~~nAa~lAa~Il~-~~ 139 (169)
T 3trh_A 65 --FIAAAGLAAHLAGTIAA-HTLKPVIGVPMAGGSLGGLDALLSTVQ-MPGGVPVACTAIGKAGAKNAAILAAQIIA-LQ 139 (169)
T ss_dssp --EEEEECSSCCHHHHHHH-TCSSCEEEEECCCSTTTTHHHHHHHHC-CCTTSCCEECCSTHHHHHHHHHHHHHHHH-TT
T ss_pred --EEEECChhhhhHHHHHh-cCCCCEEEeecCCCCCCCHHHHHHhhc-CCCCCceEEEecCCccchHHHHHHHHHHc-CC
Confidence 77766632 33333 2468999999853 22122222 222 1 33211 111 1233444433433 34
Q ss_pred chhHHHHHHHHHHHHHHHHHHh
Q 012543 420 DAEGREMRNRAAILKEKLDLCT 441 (461)
Q Consensus 420 ~~~~~~~~~~a~~l~~~~~~~~ 441 (461)
| +.++++.+..++++++.+
T Consensus 140 d---~~l~~kl~~~r~~~~~~v 158 (169)
T 3trh_A 140 D---KSIAQKLVQQRTAKRETL 158 (169)
T ss_dssp C---HHHHHHHHHHHHHHHHHH
T ss_pred C---HHHHHHHHHHHHHHHHHH
Confidence 5 688999988888887543
No 201
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=30.13 E-value=36 Score=30.57 Aligned_cols=32 Identities=19% Similarity=0.254 Sum_probs=25.0
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
+|+|+|+..|..| ..+|..|.++||+|+++..
T Consensus 3 ~m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 3 AMKIAIAGAGAMG-----SRLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECcCHHH-----HHHHHHHHhCCCcEEEEEC
Confidence 3689998776555 4678899999999999765
No 202
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=30.02 E-value=44 Score=30.01 Aligned_cols=32 Identities=13% Similarity=0.218 Sum_probs=22.9
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 16 RLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 16 ~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
+|+++ |+.|.+- ..|+++|.++||+|+.++-.
T Consensus 13 ~ilVt--GatG~iG--~~l~~~L~~~g~~V~~l~R~ 44 (318)
T 2r6j_A 13 KILIF--GGTGYIG--NHMVKGSLKLGHPTYVFTRP 44 (318)
T ss_dssp CEEEE--TTTSTTH--HHHHHHHHHTTCCEEEEECT
T ss_pred eEEEE--CCCchHH--HHHHHHHHHCCCcEEEEECC
Confidence 55554 4555553 46789999999999988764
No 203
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=30.00 E-value=60 Score=25.35 Aligned_cols=33 Identities=12% Similarity=0.081 Sum_probs=27.6
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITII 48 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~ 48 (461)
..+++++..|. =+-|++++++.|.++|.+|+++
T Consensus 18 ~~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~ 50 (142)
T 3lyu_A 18 FGKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL 50 (142)
T ss_dssp CSEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE
Confidence 45788887444 3899999999999999999998
No 204
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=29.97 E-value=83 Score=27.31 Aligned_cols=37 Identities=14% Similarity=0.406 Sum_probs=26.8
Q ss_pred CeEEEEcCCCcc-----------CHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 15 RRLILFPLPFQG-----------HINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 15 ~~il~~~~~~~G-----------Hi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
+||+++..+..+ ...=++.....|++.|++|+++++.
T Consensus 4 ~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~ 51 (244)
T 3kkl_A 4 KRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSET 51 (244)
T ss_dssp CEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 388887665322 2245666788889999999999985
No 205
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=29.89 E-value=66 Score=29.30 Aligned_cols=35 Identities=11% Similarity=0.222 Sum_probs=26.7
Q ss_pred CCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 12 KKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 12 ~~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
+++|||+|+..+..+ ++..++|.+.||+|..+.+.
T Consensus 2 ~~mmrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~ 36 (317)
T 3rfo_A 2 NAMIKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQ 36 (317)
T ss_dssp CTTSEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECC
T ss_pred CCceEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeC
Confidence 467899999877554 34567788889999988775
No 206
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=29.83 E-value=45 Score=30.16 Aligned_cols=32 Identities=13% Similarity=0.186 Sum_probs=26.2
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
|||+++..|+.|- .+|..|.+.||+|+++...
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcC
Confidence 5899998888874 4688899999999998874
No 207
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=29.73 E-value=24 Score=29.98 Aligned_cols=32 Identities=19% Similarity=0.318 Sum_probs=23.9
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
|+|+++.. |.+ -..+|+.|.++||+|+++...
T Consensus 1 M~iiIiG~---G~~--G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGG---ETT--AYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CCEEEECC---HHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECC---CHH--HHHHHHHHHhCCCeEEEEECC
Confidence 46777754 333 357899999999999998764
No 208
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=29.66 E-value=57 Score=32.16 Aligned_cols=40 Identities=15% Similarity=0.080 Sum_probs=30.0
Q ss_pred CCCCeEEEEcCCCccC--HHHHHHHHHH--HHhCCCeEEEEeCC
Q 012543 12 KKGRRLILFPLPFQGH--INPMLQLANI--LYSKGFSITIIHTK 51 (461)
Q Consensus 12 ~~~~~il~~~~~~~GH--i~p~l~La~~--L~~rGh~V~~~~~~ 51 (461)
+++|||+++.....+| -.-+..|++. |.+.||+|++++..
T Consensus 203 ~~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~ 246 (568)
T 2vsy_A 203 KGPLRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQMHLFATS 246 (568)
T ss_dssp SSCEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEEEEEEESS
T ss_pred CCCeEEEEECcccccChHHHHHHHHHhhccCCcccEEEEEEECC
Confidence 4678999987654444 3456788999 67789999999874
No 209
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=29.61 E-value=56 Score=27.41 Aligned_cols=33 Identities=21% Similarity=0.228 Sum_probs=22.7
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHH-hCCCeEEEEeCC
Q 012543 16 RLILFPLPFQGHINPMLQLANILY-SKGFSITIIHTK 51 (461)
Q Consensus 16 ~il~~~~~~~GHi~p~l~La~~L~-~rGh~V~~~~~~ 51 (461)
|.++++ |+.|-+ -.++++.|. ++||+|+.+...
T Consensus 6 k~vlVt-Gasg~i--G~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 6 XYITIL-GAAGQI--AQXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp SEEEEE-STTSHH--HHHHHHHHHHHCCCEEEEEESS
T ss_pred EEEEEE-eCCcHH--HHHHHHHHHhcCCceEEEEecC
Confidence 544444 344444 357889999 899999998764
No 210
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=29.61 E-value=53 Score=24.35 Aligned_cols=36 Identities=14% Similarity=0.003 Sum_probs=27.1
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIH 49 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~ 49 (461)
.|||+++|..+.|+-.-.-.+-+.+.++|.++.+-.
T Consensus 4 ~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~ 39 (109)
T 2l2q_A 4 SMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEA 39 (109)
T ss_dssp CEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEE
T ss_pred ceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEE
Confidence 368899888888887666677778888898776533
No 211
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=29.59 E-value=78 Score=26.94 Aligned_cols=37 Identities=27% Similarity=0.290 Sum_probs=25.8
Q ss_pred CCCeEEEEcCCCccC----HHHHHHHHHHHHhCCCeEEEEe
Q 012543 13 KGRRLILFPLPFQGH----INPMLQLANILYSKGFSITIIH 49 (461)
Q Consensus 13 ~~~~il~~~~~~~GH----i~p~l~La~~L~~rGh~V~~~~ 49 (461)
+.++|.+++....+- ..-...|++.|+++|+.|+.-.
T Consensus 12 ~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGG 52 (215)
T 2a33_A 12 KFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGG 52 (215)
T ss_dssp SCSEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCCeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECC
Confidence 344799986655442 2356788999999999887643
No 212
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=29.59 E-value=1e+02 Score=23.60 Aligned_cols=48 Identities=10% Similarity=0.041 Sum_probs=31.3
Q ss_pred cCCccccCcccchhhhhHHHHHHhhh-ceeecCCccCHHHHHHHHHHHhcc
Q 012543 371 EGVPMICQPCHGEQMVIARYVSDVWK-VGLHLERKLERGEVERAIRRVMVD 420 (461)
Q Consensus 371 ~GvP~l~~P~~~DQ~~na~~v~~~lG-~G~~l~~~~~~~~l~~~i~~ll~~ 420 (461)
..+|+|++--..|.......+ + .| +--.+.+.++.++|.++|++++..
T Consensus 75 ~~~~ii~~s~~~~~~~~~~~~-~-~g~~~~~l~KP~~~~~L~~~i~~~l~~ 123 (151)
T 3kcn_A 75 PNSVYLMLTGNQDLTTAMEAV-N-EGQVFRFLNKPCQMSDIKAAINAGIKQ 123 (151)
T ss_dssp SSCEEEEEECGGGHHHHHHHH-H-HTCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCcEEEEEECCCCHHHHHHHH-H-cCCeeEEEcCCCCHHHHHHHHHHHHHH
Confidence 467777765555444333333 3 36 533444458999999999999987
No 213
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=29.54 E-value=31 Score=31.12 Aligned_cols=33 Identities=15% Similarity=0.016 Sum_probs=26.0
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 13 KGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
++++|.|+..|..| ..+|+.|.++||+|+++..
T Consensus 6 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 6 TDFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADL 38 (303)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEEC
Confidence 45799999776655 4688999999999998754
No 214
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=29.47 E-value=42 Score=28.03 Aligned_cols=33 Identities=12% Similarity=0.200 Sum_probs=23.8
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
|||+++ |+.|.+- ..|+++|.++||+|+.++-.
T Consensus 1 MkvlVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGII--GATGRAG--SRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEE--cCCchhH--HHHHHHHHhCCCEEEEEEcC
Confidence 465554 4455554 47889999999999998764
No 215
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=29.42 E-value=38 Score=31.46 Aligned_cols=42 Identities=24% Similarity=0.309 Sum_probs=26.0
Q ss_pred CccccccccccCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 1 MENLGESHMQQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 1 ~~~~~~~~m~~~~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
|.+...+.|. +.+|+++..|-.| +.+|..|+++|++|+++-.
T Consensus 1 m~~~~~~~m~---~~dVvIVGaG~aG-----l~~A~~L~~~G~~v~viE~ 42 (379)
T 3alj_A 1 MANVNKTPGK---TRRAEVAGGGFAG-----LTAAIALKQNGWDVRLHEK 42 (379)
T ss_dssp -------------CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCccCCCCC---CCeEEEECCCHHH-----HHHHHHHHHCCCCEEEEec
Confidence 4445555564 5689998876555 7788899999999999865
No 216
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=29.39 E-value=88 Score=25.98 Aligned_cols=37 Identities=3% Similarity=0.036 Sum_probs=25.8
Q ss_pred CCCCeEEEEcCCCccC----HHHHHHHHHHHHhCCCeEEEEe
Q 012543 12 KKGRRLILFPLPFQGH----INPMLQLANILYSKGFSITIIH 49 (461)
Q Consensus 12 ~~~~~il~~~~~~~GH----i~p~l~La~~L~~rGh~V~~~~ 49 (461)
..+++|.+++... +. ..-...|++.|+++|+.|..-.
T Consensus 11 ~~~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GG 51 (189)
T 3sbx_A 11 PGRWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGG 51 (189)
T ss_dssp --CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCCeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECC
Confidence 3458899888654 43 3456788888999999887754
No 217
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=29.28 E-value=87 Score=26.58 Aligned_cols=34 Identities=21% Similarity=0.225 Sum_probs=23.9
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEeCC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKG-FSITIIHTK 51 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rG-h~V~~~~~~ 51 (461)
|+.++++ |+.|-+- .+|++.|.++| |+|+.+...
T Consensus 23 mk~vlVt-GatG~iG--~~l~~~L~~~G~~~V~~~~R~ 57 (236)
T 3qvo_A 23 MKNVLIL-GAGGQIA--RHVINQLADKQTIKQTLFARQ 57 (236)
T ss_dssp CEEEEEE-TTTSHHH--HHHHHHHTTCTTEEEEEEESS
T ss_pred ccEEEEE-eCCcHHH--HHHHHHHHhCCCceEEEEEcC
Confidence 4555555 4444443 57889999999 999998764
No 218
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=29.26 E-value=42 Score=25.19 Aligned_cols=65 Identities=9% Similarity=0.011 Sum_probs=45.0
Q ss_pred hcCCCCCccccccCchH---------HHHHhhcCCccccCcccchhhhhHHHHHHhhhceeecCCccCHHHHHHHHHHHh
Q 012543 348 LAHPATGAFWTHCGWNS---------TLESMCEGVPMICQPCHGEQMVIARYVSDVWKVGLHLERKLERGEVERAIRRVM 418 (461)
Q Consensus 348 L~~~~~~~~I~HGG~gs---------~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~l~~~i~~ll 418 (461)
+..+++ +|-..|..| +..|...|+|+|++=.++.+. .-..+++. +.- +- .++.+.|.++|+..+
T Consensus 36 I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~~-a~~--iV-~Wn~~~I~~aI~~~~ 108 (111)
T 1eiw_A 36 PEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEAV-SSE--VV-GWNPHCIRDALEDAL 108 (111)
T ss_dssp SSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHHH-CSE--EE-CSCHHHHHHHHHHHH
T ss_pred cccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHhh-Cce--ec-cCCHHHHHHHHHhcc
Confidence 356777 898888887 566788999999998777551 11224442 222 21 488999999999876
Q ss_pred c
Q 012543 419 V 419 (461)
Q Consensus 419 ~ 419 (461)
+
T Consensus 109 ~ 109 (111)
T 1eiw_A 109 D 109 (111)
T ss_dssp C
T ss_pred C
Confidence 4
No 219
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=29.19 E-value=44 Score=29.10 Aligned_cols=38 Identities=3% Similarity=-0.106 Sum_probs=25.0
Q ss_pred HHHHhhcccccCCCCccEEEeCCCc-hhhHHHHHHcCCCeEEEecc
Q 012543 101 LAKLLSNAEEKEEEPIACLITDASW-FFTHDVAESLKLPRIVLRSL 145 (461)
Q Consensus 101 ~~~l~~~~~~~~~~~pDlvi~D~~~-~~a~~~A~~lgiP~v~~~~~ 145 (461)
+|.+.. .+||+||..... ......-++.|||++.+...
T Consensus 53 ~E~i~~-------l~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~~ 91 (260)
T 2q8p_A 53 VEAVKK-------LKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDFD 91 (260)
T ss_dssp HHHHHH-------TCCSEEEEEGGGHHHHHHHHHHHTSCCEEECCS
T ss_pred HHHHHh-------cCCCEEEecCccCHHHHHHHHHcCCcEEEecCC
Confidence 455655 789999986433 22234456779999987543
No 220
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=29.10 E-value=55 Score=29.33 Aligned_cols=38 Identities=11% Similarity=0.054 Sum_probs=32.0
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
.+.|+|+.-|+-|=..-...||..|+++|++|.++-.+
T Consensus 41 ~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D 78 (307)
T 3end_A 41 AKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCD 78 (307)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 44566666678899999999999999999999998765
No 221
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=29.00 E-value=75 Score=22.89 Aligned_cols=34 Identities=9% Similarity=0.009 Sum_probs=24.0
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 13 KGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
+...|++++..+ ......+..|.+.||+|..+..
T Consensus 55 ~~~~iv~yC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (103)
T 3eme_A 55 KNEIYYIVCAGG----VRSAKVVEYLEANGIDAVNVEG 88 (103)
T ss_dssp TTSEEEEECSSS----SHHHHHHHHHHTTTCEEEEETT
T ss_pred CCCeEEEECCCC----hHHHHHHHHHHHCCCCeEEeCC
Confidence 345777777543 2456678899999998887654
No 222
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=28.92 E-value=2.3e+02 Score=22.82 Aligned_cols=139 Identities=13% Similarity=0.128 Sum_probs=74.0
Q ss_pred CeEEEEEccccccCCHHHHHHHHHHHHhCCCceEEEECCCccCCchhcccCchhHHHHhcCCCceeeecChhhhhcCCCC
Q 012543 274 KSVIYVSFGSIAAIDETKFLEVAWGLANSKVPFLWVVRPGLVRGAEWIELLPRGFLEMLDGRGHIVKWAPQQEVLAHPAT 353 (461)
Q Consensus 274 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~~~ 353 (461)
++.|-|-+||.+ +....+.....++..+.++-..+.+-+ .+|+.+.+-.. =.....+
T Consensus 3 ~~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~SaH--------R~p~~~~~~~~-------------~a~~~g~ 59 (163)
T 3ors_A 3 AMKVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVSAH--------RTPKMMVQFAS-------------EARERGI 59 (163)
T ss_dssp CCCEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTT--------TSHHHHHHHHH-------------HTTTTTC
T ss_pred CCeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEECCc--------CCHHHHHHHHH-------------HHHhCCC
Confidence 344666677755 456677888888888877655554432 25655422110 0111122
Q ss_pred CccccccCc----hHHHHHhhcCCccccCcccchhh-hhH--HHHHHhhhcee----e-cC--CccCHHHHHHHHHHHhc
Q 012543 354 GAFWTHCGW----NSTLESMCEGVPMICQPCHGEQM-VIA--RYVSDVWKVGL----H-LE--RKLERGEVERAIRRVMV 419 (461)
Q Consensus 354 ~~~I~HGG~----gs~~eal~~GvP~l~~P~~~DQ~-~na--~~v~~~lG~G~----~-l~--~~~~~~~l~~~i~~ll~ 419 (461)
++||.=.|. .++..++ .-+|+|.+|....-. ... .-+.+ +--|+ + ++ ...++..+...|..+ +
T Consensus 60 ~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vq-mp~GvPVatV~I~~a~~~nAa~lAa~Il~~-~ 136 (163)
T 3ors_A 60 NIIIAGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQ-MPGGIPVATTAIGAAGAKNAGILAARMLSI-Q 136 (163)
T ss_dssp CEEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHT-CCTTSCCEECCSTHHHHHHHHHHHHHHHHT-T
T ss_pred cEEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhh-CCCCCceEEEEcCCcccHHHHHHHHHHHhC-C
Confidence 337776663 3444443 678999999754321 111 12222 22232 1 22 123444444444433 4
Q ss_pred chhHHHHHHHHHHHHHHHHHHh
Q 012543 420 DAEGREMRNRAAILKEKLDLCT 441 (461)
Q Consensus 420 ~~~~~~~~~~a~~l~~~~~~~~ 441 (461)
| +.++++.+.+++++++.+
T Consensus 137 d---~~l~~kl~~~r~~~~~~v 155 (163)
T 3ors_A 137 N---PSLVEKLNQYESSLIQKV 155 (163)
T ss_dssp C---THHHHHHHHHHHHHHHHH
T ss_pred C---HHHHHHHHHHHHHHHHHH
Confidence 5 588999999988887544
No 223
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=28.89 E-value=1e+02 Score=25.20 Aligned_cols=40 Identities=20% Similarity=0.305 Sum_probs=27.8
Q ss_pred cccccCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 7 SHMQQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 7 ~~m~~~~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
|+|. +||+++..++.. ..-+....+.|.+.|++|+++++.
T Consensus 2 ~~m~----kkv~ill~~g~~-~~e~~~~~~~l~~ag~~v~~~s~~ 41 (190)
T 4e08_A 2 SHMS----KSALVILAPGAE-EMEFIIAADVLRRAGIKVTVAGLN 41 (190)
T ss_dssp --CC----CEEEEEECTTCC-HHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCC----cEEEEEECCCch-HHHHHHHHHHHHHCCCEEEEEECC
Confidence 6675 478777665553 444556678888999999999985
No 224
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=28.86 E-value=41 Score=30.11 Aligned_cols=34 Identities=24% Similarity=0.333 Sum_probs=24.1
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
+++|+++ |+.|.+- ..|+++|.++||+|+.++..
T Consensus 7 ~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 7 KHRILIT--GGAGFIG--GHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp CCEEEEE--TTTSHHH--HHHHHHHHHTTCCEEEECCC
T ss_pred CCeEEEE--CCCChHH--HHHHHHHHHCCCEEEEEecC
Confidence 3466554 4555554 46889999999999998763
No 225
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=28.82 E-value=44 Score=29.00 Aligned_cols=34 Identities=21% Similarity=0.243 Sum_probs=24.8
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
+.++++++.++. -+ -.++|+.|.++|++|.++..
T Consensus 6 ~~k~~lVTGas~-GI--G~aia~~l~~~G~~V~~~~r 39 (250)
T 3nyw_A 6 QKGLAIITGASQ-GI--GAVIAAGLATDGYRVVLIAR 39 (250)
T ss_dssp CCCEEEEESTTS-HH--HHHHHHHHHHHTCEEEEEES
T ss_pred CCCEEEEECCCc-HH--HHHHHHHHHHCCCEEEEEEC
Confidence 346777775543 33 36889999999999998765
No 226
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=28.75 E-value=56 Score=28.20 Aligned_cols=37 Identities=22% Similarity=0.211 Sum_probs=29.6
Q ss_pred eEEEE-c-CCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012543 16 RLILF-P-LPFQGHINPMLQLANILYSKGFSITIIHTKF 52 (461)
Q Consensus 16 ~il~~-~-~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~ 52 (461)
+++.+ . -|+-|-..-...||..|+++|++|.++-.+.
T Consensus 3 ~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 3 RIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 44443 3 3688999999999999999999999987653
No 227
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=28.75 E-value=46 Score=30.06 Aligned_cols=33 Identities=18% Similarity=0.280 Sum_probs=26.3
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 13 KGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
+.++|.|+..|..| ..+|+.|.++||+|+++..
T Consensus 20 ~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr 52 (310)
T 3doj_A 20 HMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNR 52 (310)
T ss_dssp CSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred cCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 45799999776555 6789999999999998754
No 228
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=28.75 E-value=68 Score=24.81 Aligned_cols=33 Identities=15% Similarity=0.243 Sum_probs=23.1
Q ss_pred CCccEEEeCCCch--hhHHHHHHc-------CCCeEEEeccc
Q 012543 114 EPIACLITDASWF--FTHDVAESL-------KLPRIVLRSLS 146 (461)
Q Consensus 114 ~~pDlvi~D~~~~--~a~~~A~~l-------giP~v~~~~~~ 146 (461)
.+||+||.|...+ -|..+++.+ ++|.|.++...
T Consensus 56 ~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 56 GDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp HCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 5699999997653 355555543 68988877653
No 229
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=28.73 E-value=52 Score=28.50 Aligned_cols=37 Identities=19% Similarity=0.056 Sum_probs=25.0
Q ss_pred HHHHHhhcccccCCCCccEEEeCCCc--hhhHHHHHHcCCCeEEEe
Q 012543 100 CLAKLLSNAEEKEEEPIACLITDASW--FFTHDVAESLKLPRIVLR 143 (461)
Q Consensus 100 ~~~~l~~~~~~~~~~~pDlvi~D~~~--~~a~~~A~~lgiP~v~~~ 143 (461)
.+|++.. .+||+||..... ......-++.|||++.+.
T Consensus 51 n~E~i~~-------l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (256)
T 2r7a_A 51 SSEGILS-------LRPDSVITWQDAGPQIVLDQLRAQKVNVVTLP 89 (256)
T ss_dssp CHHHHHT-------TCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred CHHHHHc-------cCCCEEEEcCCCCCHHHHHHHHHcCCcEEEec
Confidence 3566666 789999987543 223334467899998874
No 230
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=28.69 E-value=40 Score=29.84 Aligned_cols=31 Identities=10% Similarity=0.068 Sum_probs=24.5
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
|||+|+..|..| ..+|..|.++||+|+++..
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r 31 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQGHEVQGWLR 31 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCCEEEEEc
Confidence 478888766555 4788999999999999765
No 231
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=28.67 E-value=64 Score=27.41 Aligned_cols=33 Identities=15% Similarity=0.243 Sum_probs=24.0
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
+|.++++.++.| + -.+++++|.++|++|.+...
T Consensus 2 ~k~vlITGas~g-I--G~~ia~~l~~~G~~V~~~~r 34 (235)
T 3l77_A 2 MKVAVITGASRG-I--GEAIARALARDGYALALGAR 34 (235)
T ss_dssp CCEEEEESCSSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcH-H--HHHHHHHHHHCCCEEEEEeC
Confidence 456677754433 3 35889999999999988765
No 232
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=28.47 E-value=69 Score=28.12 Aligned_cols=41 Identities=17% Similarity=0.119 Sum_probs=26.7
Q ss_pred cccccCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 7 SHMQQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 7 ~~m~~~~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
+-|...-+.|++++|.++.| + -.++|+.|.++|++|.++..
T Consensus 3 ~~m~~~l~~k~~lVTGas~G-I--G~a~a~~la~~G~~V~~~~r 43 (277)
T 3tsc_A 3 GSMAGKLEGRVAFITGAARG-Q--GRAHAVRMAAEGADIIAVDI 43 (277)
T ss_dssp ----CTTTTCEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEEC
T ss_pred CccccccCCCEEEEECCccH-H--HHHHHHHHHHcCCEEEEEec
Confidence 34554444577777755543 3 35789999999999998765
No 233
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=28.47 E-value=98 Score=23.24 Aligned_cols=37 Identities=8% Similarity=-0.007 Sum_probs=27.2
Q ss_pred EEEEcCCCccCH--HHHHHHHHHHHhCCCeEEEEeCCCC
Q 012543 17 LILFPLPFQGHI--NPMLQLANILYSKGFSITIIHTKFN 53 (461)
Q Consensus 17 il~~~~~~~GHi--~p~l~La~~L~~rGh~V~~~~~~~~ 53 (461)
+++++.+-+|+- .-.+.+|..+.+.||+|.++-....
T Consensus 5 ~~vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~DG 43 (119)
T 2d1p_B 5 AFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADG 43 (119)
T ss_dssp EEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECGGG
T ss_pred EEEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEehHH
Confidence 344666666766 6678889999999999998776533
No 234
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=28.26 E-value=70 Score=26.58 Aligned_cols=37 Identities=14% Similarity=0.125 Sum_probs=29.3
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
+..++++.+|..|...-...+++.|.++|+.|..+-.
T Consensus 27 ~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 63 (236)
T 1zi8_A 27 PAPVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDL 63 (236)
T ss_dssp SEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECG
T ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEeccc
Confidence 3456666667778878889999999999999887654
No 235
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=28.15 E-value=99 Score=25.91 Aligned_cols=43 Identities=5% Similarity=0.098 Sum_probs=26.1
Q ss_pred ccccccCCCCeEEEEcCCCccC----HHHHHHHHHHHHhCCCeEEEEe
Q 012543 6 ESHMQQKKGRRLILFPLPFQGH----INPMLQLANILYSKGFSITIIH 49 (461)
Q Consensus 6 ~~~m~~~~~~~il~~~~~~~GH----i~p~l~La~~L~~rGh~V~~~~ 49 (461)
.+.+..+..++|.+++... +. ..-...|++.|+++|+.|..-.
T Consensus 14 ~~~~~~~~~~~v~Vfggs~-~~~~~~~~~A~~lg~~La~~g~~lV~GG 60 (199)
T 3qua_A 14 DVKEGQDRQWAVCVYCASG-PTHPELLELAAEVGSSIAARGWTLVSGG 60 (199)
T ss_dssp -------CCCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred ccccccCCCCEEEEEECCC-CCCHHHHHHHHHHHHHHHHCCCEEEECC
Confidence 3444444557898887554 32 4556788999999999886643
No 236
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=28.13 E-value=68 Score=27.55 Aligned_cols=22 Identities=14% Similarity=0.212 Sum_probs=18.4
Q ss_pred HHHHHHHHHHhCCCeEEEEeCC
Q 012543 30 PMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 30 p~l~La~~L~~rGh~V~~~~~~ 51 (461)
--.++|++|.++|++|+++..+
T Consensus 36 iG~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 36 MGFAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp HHHHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHHCCCEEEEEECC
Confidence 3467899999999999998764
No 237
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=28.12 E-value=45 Score=30.30 Aligned_cols=32 Identities=9% Similarity=0.229 Sum_probs=26.5
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
|||+++..|+.| ..+|..|.+.||+|+++...
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIG-----SFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHTTCEEEEECST
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 689999888776 45788899999999998874
No 238
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=28.10 E-value=1.7e+02 Score=21.92 Aligned_cols=37 Identities=22% Similarity=0.113 Sum_probs=23.6
Q ss_pred CCeEEEEEccccccCCHHHHHHHHHHHHhCCCceEEE
Q 012543 273 PKSVIYVSFGSIAAIDETKFLEVAWGLANSKVPFLWV 309 (461)
Q Consensus 273 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~ 309 (461)
.+.+|+++.||........+..+.+.++.....+-+.
T Consensus 5 ~~alllv~HGS~~~~~~~~~~~l~~~l~~~~~~V~~a 41 (126)
T 3lyh_A 5 PHQIILLAHGSSDARWCETFEKLAEPTVESIENAAIA 41 (126)
T ss_dssp CEEEEEEECCCSCHHHHHHHHHHHHHHHHHSTTCEEE
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHHHHHhhcCCEEEE
Confidence 4689999999976433345666777776543344333
No 239
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=28.00 E-value=41 Score=30.54 Aligned_cols=31 Identities=16% Similarity=0.327 Sum_probs=25.0
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 012543 13 KGRRLILFPLPFQGHINPMLQLANILYSKGFSITII 48 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~ 48 (461)
.++||+++..|..| ..+|..|++.||+|+++
T Consensus 18 ~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~ 48 (318)
T 3hwr_A 18 QGMKVAIMGAGAVG-----CYYGGMLARAGHEVILI 48 (318)
T ss_dssp --CEEEEESCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEE
Confidence 46799999887776 56788899999999998
No 240
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=27.95 E-value=59 Score=26.94 Aligned_cols=36 Identities=17% Similarity=0.385 Sum_probs=28.2
Q ss_pred CCeEEEEcCCCcc-----CHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 14 GRRLILFPLPFQG-----HINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 14 ~~~il~~~~~~~G-----Hi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
..+|+++|. +| --++.-.|++.|.++|.+|.|+.++
T Consensus 46 A~~ViIVPG--YGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 86 (203)
T 2fsv_C 46 ASKVIIVPG--YGMAVAQAQHALREMADVLKKEGVEVSYAIHP 86 (203)
T ss_dssp CSEEEEEEC--HHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCcEEEEcC--chHhHHHHHHHHHHHHHHHHHcCCeEEEEecc
Confidence 357777763 33 2357789999999999999999996
No 241
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=27.89 E-value=45 Score=28.09 Aligned_cols=32 Identities=16% Similarity=0.236 Sum_probs=24.8
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
.++|.++..|..| ..+|..|.++||+|+++..
T Consensus 19 ~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 19 GMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcC
Confidence 5689988766555 5678899999999998754
No 242
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=27.70 E-value=64 Score=28.80 Aligned_cols=39 Identities=21% Similarity=0.343 Sum_probs=29.4
Q ss_pred CCCCeEEEEcCCCccCHHHH--HHHHHHHHhCC-CeEEEEeCC
Q 012543 12 KKGRRLILFPLPFQGHINPM--LQLANILYSKG-FSITIIHTK 51 (461)
Q Consensus 12 ~~~~~il~~~~~~~GHi~p~--l~La~~L~~rG-h~V~~~~~~ 51 (461)
.|+.|||+++ +..+|-.+. ..|++.|.+.| ++|++....
T Consensus 2 ~~~~kvLiv~-G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 2 RKPIKTLLIT-GQNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCCEEEEEEE-SCCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CCceEEEEEc-CCCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 3678999995 555886544 47788888888 999998763
No 243
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=27.56 E-value=51 Score=24.11 Aligned_cols=32 Identities=19% Similarity=0.375 Sum_probs=23.0
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEeCC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKG-FSITIIHTK 51 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rG-h~V~~~~~~ 51 (461)
++|+++.. |.+- ..+++.|.++| |+|+.+...
T Consensus 6 ~~v~I~G~---G~iG--~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 6 WNICVVGA---GKIG--QMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp EEEEEECC---SHHH--HHHHHHHHHCSSEEEEEEESC
T ss_pred CeEEEECC---CHHH--HHHHHHHHhCCCceEEEEeCC
Confidence 47777744 4332 46788999999 999887763
No 244
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=27.54 E-value=3e+02 Score=23.74 Aligned_cols=40 Identities=15% Similarity=0.223 Sum_probs=22.9
Q ss_pred cCCCCeEEEEcCCCcc-CHHHHH-HHHHHHHhCCCeEEEEeC
Q 012543 11 QKKGRRLILFPLPFQG-HINPML-QLANILYSKGFSITIIHT 50 (461)
Q Consensus 11 ~~~~~~il~~~~~~~G-Hi~p~l-~La~~L~~rGh~V~~~~~ 50 (461)
.++..+|.++...... .+..++ .+-+++.++|+++.++..
T Consensus 5 ~~~~~~Igvv~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~ 46 (291)
T 3egc_A 5 SKRSNVVGLIVSDIENVFFAEVASGVESEARHKGYSVLLANT 46 (291)
T ss_dssp --CCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCcEEEEEECCCcchHHHHHHHHHHHHHHHCCCEEEEEeC
Confidence 4566777776543322 222322 455667778999988665
No 245
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=27.53 E-value=33 Score=31.51 Aligned_cols=38 Identities=5% Similarity=0.188 Sum_probs=26.4
Q ss_pred ccccCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCC-eEEEEeC
Q 012543 8 HMQQKKGRRLILFPLPFQGHINPMLQLANILYSKGF-SITIIHT 50 (461)
Q Consensus 8 ~m~~~~~~~il~~~~~~~GHi~p~l~La~~L~~rGh-~V~~~~~ 50 (461)
+|..++++||.++.. |++--. +|..|+..|| +|+++-.
T Consensus 3 ~~~~~~~~kI~VIGa---G~vG~~--lA~~la~~g~~~V~L~D~ 41 (331)
T 1pzg_A 3 PALVQRRKKVAMIGS---GMIGGT--MGYLCALRELADVVLYDV 41 (331)
T ss_dssp CCCCSCCCEEEEECC---SHHHHH--HHHHHHHHTCCEEEEECS
T ss_pred cCcCCCCCEEEEECC---CHHHHH--HHHHHHhCCCCeEEEEEC
Confidence 344456789998865 444333 8888888999 9887655
No 246
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=27.43 E-value=55 Score=29.65 Aligned_cols=37 Identities=8% Similarity=0.064 Sum_probs=24.7
Q ss_pred HHHHhhcccccCCCCccEEEeCCCc-hhhHHHHHHcCCCeEEEec
Q 012543 101 LAKLLSNAEEKEEEPIACLITDASW-FFTHDVAESLKLPRIVLRS 144 (461)
Q Consensus 101 ~~~l~~~~~~~~~~~pDlvi~D~~~-~~a~~~A~~lgiP~v~~~~ 144 (461)
+|+++. .+||+||..... .....--++.|||++.+..
T Consensus 77 ~E~i~~-------l~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~~ 114 (326)
T 3psh_A 77 IESLLA-------LKPDVVFVTNYAPSEMIKQISDVNIPVVAISL 114 (326)
T ss_dssp HHHHHH-------TCCSEEEEETTCCHHHHHHHHTTTCCEEEECS
T ss_pred HHHHHc-------cCCCEEEEeCCCChHHHHHHHHcCCCEEEEec
Confidence 456665 789999987543 2223344677999999753
No 247
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=27.38 E-value=43 Score=30.59 Aligned_cols=31 Identities=16% Similarity=0.211 Sum_probs=26.2
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
+||.|+..|..| ..+|..|.+.||+|+++..
T Consensus 15 ~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r 45 (335)
T 1z82_A 15 MRFFVLGAGSWG-----TVFAQMLHENGEEVILWAR 45 (335)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 699999877666 5788999999999998765
No 248
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=27.37 E-value=2.6e+02 Score=22.96 Aligned_cols=105 Identities=15% Similarity=0.101 Sum_probs=63.1
Q ss_pred CCHHHHHHHHHHHHhCCCceEEEECCCccCCchhcccCchhHHHHhcCCCceeeecChhhhhcCCCCCccccccCchHHH
Q 012543 287 IDETKFLEVAWGLANSKVPFLWVVRPGLVRGAEWIELLPRGFLEMLDGRGHIVKWAPQQEVLAHPATGAFWTHCGWNSTL 366 (461)
Q Consensus 287 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~gs~~ 366 (461)
..++.+..+.+..+..+.++|+...+. ...||.-+-....-=++=++ - +.+ +-+|..++.
T Consensus 52 R~p~~l~~~~~~a~~~g~~ViIa~AG~-------aa~LpgvvA~~t~~PVIgVP---~-------~~~---~l~G~dsLl 111 (183)
T 1o4v_A 52 RTPDRMFEYAKNAEERGIEVIIAGAGG-------AAHLPGMVASITHLPVIGVP---V-------KTS---TLNGLDSLF 111 (183)
T ss_dssp TCHHHHHHHHHHTTTTTCCEEEEEEES-------SCCHHHHHHHHCSSCEEEEE---E-------CCT---TTTTHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCcEEEEecCc-------ccccHHHHHhccCCCEEEee---C-------CCC---CCCcHHHHH
Confidence 566777777777777778888887765 25577665322111111111 0 110 457888888
Q ss_pred HHhhc--CCccccCcccchhhhhHHHHHHhhhceeecCCccCHHHHHHHHHHHhcc
Q 012543 367 ESMCE--GVPMICQPCHGEQMVIARYVSDVWKVGLHLERKLERGEVERAIRRVMVD 420 (461)
Q Consensus 367 eal~~--GvP~l~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~l~~~i~~ll~~ 420 (461)
..+.. |+|+- -...|-..||..+... =+ .++...|.++++..-.+
T Consensus 112 SivqmP~GvpVa--tV~Id~~~nAa~lAaq-Il------a~~d~~l~~kL~~~r~~ 158 (183)
T 1o4v_A 112 SIVQMPGGVPVA--TVAINNAKNAGILAAS-IL------GIKYPEIARKVKEYKER 158 (183)
T ss_dssp HHHTCCTTCCCE--ECCTTCHHHHHHHHHH-HH------HTTCHHHHHHHHHHHHH
T ss_pred HHhcCCCCCeeE--EEecCCchHHHHHHHH-HH------hcCCHHHHHHHHHHHHH
Confidence 88887 99943 3455688888876653 11 24556777777665543
No 249
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=27.31 E-value=71 Score=28.80 Aligned_cols=33 Identities=12% Similarity=0.283 Sum_probs=23.3
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
.++|+++ |+.|.+- ..|++.|.++||+|+.+..
T Consensus 11 ~~~vlVT--GatG~iG--~~l~~~L~~~g~~V~~~~r 43 (342)
T 1y1p_A 11 GSLVLVT--GANGFVA--SHVVEQLLEHGYKVRGTAR 43 (342)
T ss_dssp TCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEE--CCccHHH--HHHHHHHHHCCCEEEEEeC
Confidence 4555554 4555554 4678999999999998765
No 250
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=27.30 E-value=61 Score=26.93 Aligned_cols=36 Identities=19% Similarity=0.304 Sum_probs=28.2
Q ss_pred CCeEEEEcCCCcc-----CHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 14 GRRLILFPLPFQG-----HINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 14 ~~~il~~~~~~~G-----Hi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
..+|+++|. +| --++.-.|++.|.++|.+|.|+.++
T Consensus 45 A~~ViIVPG--YGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 85 (207)
T 1djl_A 45 ANSIIITPG--YGLCAAKAQYPIADLVKMLTEQGKKVRFGIHP 85 (207)
T ss_dssp CSEEEEEEC--HHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCeEEEECC--chHHHHHHhHHHHHHHHHHHHCCCeEEEEeCc
Confidence 357777763 33 2357789999999999999999996
No 251
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=27.26 E-value=1.1e+02 Score=25.01 Aligned_cols=43 Identities=16% Similarity=0.130 Sum_probs=25.5
Q ss_pred cccccCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 7 SHMQQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 7 ~~m~~~~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
+.|+ +++++|+++...+.=.. =++.-.+.|.+.|++|+++++.
T Consensus 2 ~~m~-~t~~~v~il~~~gFe~~-E~~~p~~~l~~ag~~V~~~s~~ 44 (177)
T 4hcj_A 2 NAMG-KTNNILYVMSGQNFQDE-EYFESKKIFESAGYKTKVSSTF 44 (177)
T ss_dssp ---C-CCCEEEEECCSEEECHH-HHHHHHHHHHHTTCEEEEEESS
T ss_pred Cccc-cCCCEEEEECCCCccHH-HHHHHHHHHHHCCCEEEEEECC
Confidence 3455 23444555544443333 3456677888999999999985
No 252
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=27.24 E-value=48 Score=27.77 Aligned_cols=33 Identities=6% Similarity=0.163 Sum_probs=23.7
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
|||+++ |+.|.+- ..|+++|.++||+|+.++-.
T Consensus 1 MkilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVL--GATGRAG--SAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEE--cCCCHHH--HHHHHHHHHCCCEEEEEEec
Confidence 455444 4555554 57889999999999998764
No 253
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=27.18 E-value=44 Score=31.39 Aligned_cols=40 Identities=15% Similarity=0.177 Sum_probs=27.0
Q ss_pred cccccCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 7 SHMQQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 7 ~~m~~~~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
+.+...++.+|+++..|-.| +.+|..|+++|++|+++-..
T Consensus 16 ~~~~~~~~~dV~IVGaG~aG-----l~~A~~La~~G~~V~v~E~~ 55 (407)
T 3rp8_A 16 ENLYFQGHMKAIVIGAGIGG-----LSAAVALKQSGIDCDVYEAV 55 (407)
T ss_dssp -------CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESS
T ss_pred CcccCCCCCEEEEECCCHHH-----HHHHHHHHhCCCCEEEEeCC
Confidence 44455567899999866444 77899999999999998653
No 254
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=27.18 E-value=65 Score=27.31 Aligned_cols=36 Identities=11% Similarity=0.094 Sum_probs=29.2
Q ss_pred eEEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 16 RLILFP-LPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 16 ~il~~~-~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
.|.|+. -|+-|-..-...||..|+++|++|.++-.+
T Consensus 4 ~i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D 40 (237)
T 1g3q_A 4 IISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD 40 (237)
T ss_dssp EEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCC
Confidence 344433 368899999999999999999999998765
No 255
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=27.08 E-value=1e+02 Score=25.51 Aligned_cols=35 Identities=20% Similarity=0.332 Sum_probs=27.2
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 17 LILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 17 il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
|++++.+...+-.....+++.|++.|++|.++.-.
T Consensus 110 iil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G 144 (192)
T 2x5n_A 110 VAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIG 144 (192)
T ss_dssp EEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEES
T ss_pred EEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeC
Confidence 45555555567778889999999999999987654
No 256
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=27.02 E-value=35 Score=32.73 Aligned_cols=53 Identities=13% Similarity=0.216 Sum_probs=37.9
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCC-----CC-CCCCCCCceEEEcCC
Q 012543 13 KGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFN-----SP-NPSNYPHFTFCSIQD 70 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~-----~~-~~~~~~~~~~~~~~~ 70 (461)
|.++|+++.+|++||-. |.-|++-|.+|++..-+.. .+ ......||+..++.+
T Consensus 36 kgK~IaVIGyGsQG~Aq-----AlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf~v~~~~e 94 (491)
T 3ulk_A 36 QGKKVVIVGCGAQGLNQ-----GLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEE 94 (491)
T ss_dssp TTSEEEEESCSHHHHHH-----HHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTCEEEEHHH
T ss_pred cCCEEEEeCCChHhHHH-----HhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCCEecCHHH
Confidence 57899999999999965 6789999999999875311 00 112236788777653
No 257
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=26.95 E-value=42 Score=30.65 Aligned_cols=32 Identities=16% Similarity=0.295 Sum_probs=25.3
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
.++|.|+..|..| .++|..|+++||+|+++..
T Consensus 6 ~~kI~vIGaG~MG-----~~iA~~la~~G~~V~l~d~ 37 (319)
T 2dpo_A 6 AGDVLIVGSGLVG-----RSWAMLFASGGFRVKLYDI 37 (319)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CceEEEEeeCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 4589999877666 4788889999999998755
No 258
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=26.66 E-value=52 Score=29.35 Aligned_cols=37 Identities=8% Similarity=0.130 Sum_probs=27.4
Q ss_pred CeEEEEcCCCccC---HHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 15 RRLILFPLPFQGH---INPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 15 ~~il~~~~~~~GH---i~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
|||++++.+.... ......++++|.++||+|.++.+.
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 4899988764321 234467999999999999998763
No 259
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=26.59 E-value=47 Score=27.20 Aligned_cols=83 Identities=11% Similarity=0.000 Sum_probs=48.1
Q ss_pred eEEEEEcccccc---CCHHHHHHHHHHHHhCCCceEEEECCCccCCchhcccCchhHHHHhcCCCceeeecChhhhhcCC
Q 012543 275 SVIYVSFGSIAA---IDETKFLEVAWGLANSKVPFLWVVRPGLVRGAEWIELLPRGFLEMLDGRGHIVKWAPQQEVLAHP 351 (461)
Q Consensus 275 ~~v~vs~Gs~~~---~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vp~~~lL~~~ 351 (461)
.+-.++.|+... ........+...+++.|..+.....-+. + .+.+-+.+ ...+..+
T Consensus 5 ~v~IistGdEll~G~i~DtN~~~l~~~L~~~G~~v~~~~iv~D----d-~~~I~~~l----------------~~a~~~~ 63 (172)
T 3kbq_A 5 NASVITVGNEILKGRTVNTNAAFIGNFLTYHGYQVRRGFVVMD----D-LDEIGWAF----------------RVALEVS 63 (172)
T ss_dssp EEEEEEECHHHHTTSSCCHHHHHHHHHHHHTTCEEEEEEEECS----C-HHHHHHHH----------------HHHHHHC
T ss_pred EEEEEEEcccccCCcEEeHHHHHHHHHHHHCCCEEEEEEEeCC----C-HHHHHHHH----------------HHHHhcC
Confidence 456677776432 3334455677888888887654432110 0 11122222 2334557
Q ss_pred CCCccccccCch-----HHHHHhh--cCCccccCcc
Q 012543 352 ATGAFWTHCGWN-----STLESMC--EGVPMICQPC 380 (461)
Q Consensus 352 ~~~~~I~HGG~g-----s~~eal~--~GvP~l~~P~ 380 (461)
|+ +|+-||.| -+.|+++ .|++++..|-
T Consensus 64 Dl--VittGG~g~~~~D~T~ea~a~~~~~~l~~~~e 97 (172)
T 3kbq_A 64 DL--VVSSGGLGPTFDDMTVEGFAKCIGQDLRIDED 97 (172)
T ss_dssp SE--EEEESCCSSSTTCCHHHHHHHHHTCCCEECHH
T ss_pred CE--EEEcCCCcCCcccchHHHHHHHcCCCeeeCHH
Confidence 88 99999988 3567765 6888776664
No 260
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=26.51 E-value=42 Score=30.71 Aligned_cols=33 Identities=18% Similarity=0.105 Sum_probs=26.8
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
.|||+++..|..| ..+|..|.+.||+|+++...
T Consensus 3 ~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVG-----GYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEECh
Confidence 4689999877666 46788999999999998763
No 261
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=26.50 E-value=63 Score=24.39 Aligned_cols=37 Identities=19% Similarity=0.117 Sum_probs=25.5
Q ss_pred CeEEEEcCC-CccCH-HHHHHHHHHHHhCC--CeEEEEeCC
Q 012543 15 RRLILFPLP-FQGHI-NPMLQLANILYSKG--FSITIIHTK 51 (461)
Q Consensus 15 ~~il~~~~~-~~GHi-~p~l~La~~L~~rG--h~V~~~~~~ 51 (461)
+|++|+-+. -.-.. +..+..|...+++| |+|.++...
T Consensus 8 ~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G 48 (117)
T 2fb6_A 8 DKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWG 48 (117)
T ss_dssp SEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECS
T ss_pred CeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEEC
Confidence 566664443 33333 44778899999999 899998774
No 262
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=26.37 E-value=47 Score=30.51 Aligned_cols=32 Identities=22% Similarity=0.196 Sum_probs=25.1
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
+|+|+++..|..| ..+|..|.++||+|+++..
T Consensus 4 ~mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 4 SKTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred cCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 4689999776555 3478889999999998765
No 263
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=26.26 E-value=70 Score=28.38 Aligned_cols=35 Identities=20% Similarity=0.278 Sum_probs=25.3
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
+.|+++++.++.| + -.++|+.|.++|++|+++.-.
T Consensus 11 ~~k~vlITGas~G-I--G~~~a~~L~~~G~~V~~~~r~ 45 (311)
T 3o26_A 11 KRRCAVVTGGNKG-I--GFEICKQLSSNGIMVVLTCRD 45 (311)
T ss_dssp -CCEEEESSCSSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEEecCCch-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 3467777755543 3 357899999999999988763
No 264
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=26.17 E-value=84 Score=27.85 Aligned_cols=45 Identities=20% Similarity=0.170 Sum_probs=29.7
Q ss_pred cccccccccCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 3 NLGESHMQQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 3 ~~~~~~m~~~~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
|+-..-|..+-+.|++++|.++.| =-.++|+.|+++|.+|.+...
T Consensus 17 n~~~~~Ms~rL~gKvalVTGas~G---IG~aiA~~la~~Ga~V~i~~r 61 (273)
T 4fgs_A 17 NLYFQSMTQRLNAKIAVITGATSG---IGLAAAKRFVAEGARVFITGR 61 (273)
T ss_dssp --------CTTTTCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred ccchhhhcchhCCCEEEEeCcCCH---HHHHHHHHHHHCCCEEEEEEC
Confidence 333445665556789999977765 236899999999999998765
No 265
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=25.96 E-value=85 Score=26.67 Aligned_cols=36 Identities=11% Similarity=0.132 Sum_probs=27.0
Q ss_pred CeEEEEcCCCccC--HHHHHHHHHHHHhCCCeEEEEeC
Q 012543 15 RRLILFPLPFQGH--INPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 15 ~~il~~~~~~~GH--i~p~l~La~~L~~rGh~V~~~~~ 50 (461)
..++++.+|..|+ ......+++.|.++|+.|..+-.
T Consensus 46 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 83 (270)
T 3pfb_A 46 YDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDF 83 (270)
T ss_dssp EEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEcc
Confidence 4455555666655 66688999999999999987655
No 266
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=25.83 E-value=1.2e+02 Score=24.42 Aligned_cols=37 Identities=14% Similarity=0.079 Sum_probs=28.1
Q ss_pred CCeEEEEcCCCccCHHHHHH--HHHHHHhCCCeEEEEeC
Q 012543 14 GRRLILFPLPFQGHINPMLQ--LANILYSKGFSITIIHT 50 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~--La~~L~~rGh~V~~~~~ 50 (461)
....+++.+|..|+...... +++.|.++|+.|..+-.
T Consensus 31 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 69 (210)
T 1imj_A 31 ARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDL 69 (210)
T ss_dssp CSCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECC
T ss_pred CCceEEEECCCCCccceeecchhHHHHHHCCCeEEEecC
Confidence 34556666677788777777 69999999999887654
No 267
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=25.56 E-value=54 Score=28.51 Aligned_cols=31 Identities=16% Similarity=0.154 Sum_probs=24.2
Q ss_pred CCccEEEeCCCch-------hhHHHHHHcCCCeEEEec
Q 012543 114 EPIACLITDASWF-------FTHDVAESLKLPRIVLRS 144 (461)
Q Consensus 114 ~~pDlvi~D~~~~-------~a~~~A~~lgiP~v~~~~ 144 (461)
.+||++++|.... .|..+.-.+++|+|.+.=
T Consensus 108 ~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVAK 145 (246)
T 3ga2_A 108 TEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAK 145 (246)
T ss_dssp SCCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEEES
T ss_pred CCCCEEEEcCcEEecCCCcchhheeeeecCCCEEeeec
Confidence 5799999997542 356678888999999863
No 268
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=25.53 E-value=91 Score=27.48 Aligned_cols=40 Identities=30% Similarity=0.387 Sum_probs=27.7
Q ss_pred ccccCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 8 HMQQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 8 ~m~~~~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
.|....+.|+++++.++.| + -.++|+.|.++|++|.++..
T Consensus 22 ~mm~~~~~k~~lVTGas~G-I--G~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 22 SMMTQKARPVAIVTGGRRG-I--GLGIARALAASGFDIAITGI 61 (280)
T ss_dssp -CCSCCCCCEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred hhhhccCCCEEEEecCCCH-H--HHHHHHHHHHCCCeEEEEeC
Confidence 3444445577777755543 3 35789999999999998764
No 269
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=25.52 E-value=3e+02 Score=23.08 Aligned_cols=46 Identities=26% Similarity=0.329 Sum_probs=30.2
Q ss_pred cccccccCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 012543 5 GESHMQQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNS 54 (461)
Q Consensus 5 ~~~~m~~~~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~ 54 (461)
..|.|.+ +++|+++++. +-.|.-..--.-|+++|++|.=+++....
T Consensus 17 ~~~~mp~-~~Lr~avVCa---SN~NRSMEAH~~L~k~Gf~V~SfGTGs~V 62 (214)
T 4h3k_B 17 RGSHMPS-SPLRVAVVSS---SNQNRSMEAHNILSKRGFSVRSFGTGTHV 62 (214)
T ss_dssp ----------CEEEEEES---SSSSHHHHHHHHHHHTTCEEEEEECSSSE
T ss_pred CCCCCCC-CCCeEEEECC---CCcchhHHHHHHHHHCCCceEeecCCCcc
Confidence 4566664 6799999884 55677888888899999999998886443
No 270
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=25.43 E-value=73 Score=28.75 Aligned_cols=35 Identities=14% Similarity=0.281 Sum_probs=25.0
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 13 KGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
++|+|+++ |+.|.+- ..|++.|.++||+|+.++..
T Consensus 12 ~~M~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 12 AHVKYAVL--GATGLLG--HHAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp CCCEEEEE--STTSHHH--HHHHHHHHHTTCEEEEEECT
T ss_pred cCCEEEEE--CCCcHHH--HHHHHHHHHCCCEEEEEecC
Confidence 34676665 4455443 46789999999999998764
No 271
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=25.39 E-value=2.2e+02 Score=24.55 Aligned_cols=34 Identities=12% Similarity=0.033 Sum_probs=27.4
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
-|++++|.++.| =-.++|+.|+++|.+|.+....
T Consensus 11 GK~alVTGas~G---IG~aia~~la~~Ga~Vv~~~~~ 44 (242)
T 4b79_A 11 GQQVLVTGGSSG---IGAAIAMQFAELGAEVVALGLD 44 (242)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 488888877665 2468899999999999987764
No 272
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=25.34 E-value=1.1e+02 Score=24.72 Aligned_cols=36 Identities=8% Similarity=0.145 Sum_probs=31.3
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 16 RLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 16 ~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
.+.++...+.|-..-+..|++.|..+|++|..+...
T Consensus 6 ~i~i~G~sGsGKTTl~~~L~~~l~~~g~~v~~ik~~ 41 (169)
T 1xjc_A 6 VWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHH 41 (169)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEEECCCCCCHHHHHHHHHHhhHhcCCeeeEEEeC
Confidence 667777778899999999999999999999988865
No 273
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=25.31 E-value=39 Score=30.64 Aligned_cols=33 Identities=12% Similarity=0.090 Sum_probs=25.6
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCC-eEEEEeC
Q 012543 13 KGRRLILFPLPFQGHINPMLQLANILYSKGF-SITIIHT 50 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~p~l~La~~L~~rGh-~V~~~~~ 50 (461)
+.++|.|+..|..| ..+|+.|.+.|| +|+++..
T Consensus 23 ~~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr 56 (312)
T 3qsg_A 23 NAMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDA 56 (312)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECS
T ss_pred CCCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcC
Confidence 45799999877666 478999999999 9988655
No 274
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=25.24 E-value=92 Score=25.95 Aligned_cols=37 Identities=16% Similarity=0.136 Sum_probs=26.8
Q ss_pred CCeEEEEcCCCccCHHHHHH-HHHHHHhCCCeEEEEeC
Q 012543 14 GRRLILFPLPFQGHINPMLQ-LANILYSKGFSITIIHT 50 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~-La~~L~~rGh~V~~~~~ 50 (461)
+|||+++-....|+..-+.. +++.|.+.|++|.++.-
T Consensus 6 mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l 43 (211)
T 1ydg_A 6 PVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKV 43 (211)
T ss_dssp CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEec
Confidence 45887776666787766654 56777778999988765
No 275
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=25.23 E-value=58 Score=29.14 Aligned_cols=35 Identities=20% Similarity=0.192 Sum_probs=23.6
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
+.+.++++ |+.|-+- ..|+++|.++||+|+.+...
T Consensus 11 ~~~~vlVT-GatG~iG--~~l~~~L~~~G~~V~~~~r~ 45 (321)
T 2pk3_A 11 GSMRALIT-GVAGFVG--KYLANHLTEQNVEVFGTSRN 45 (321)
T ss_dssp --CEEEEE-TTTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CcceEEEE-CCCChHH--HHHHHHHHHCCCEEEEEecC
Confidence 34444555 5556554 46889999999999998764
No 276
>3p9y_A CG14216, LD40846P; phosphatase, CIS proline, LMW PTP-like fold, RNA polymerase hydrolase; HET: N7P SEP SET IMD PG4; 2.10A {Drosophila melanogaster} PDB: 3fdf_A 3fmv_A 3omx_A 3omw_A
Probab=25.23 E-value=1.3e+02 Score=24.98 Aligned_cols=45 Identities=22% Similarity=0.280 Sum_probs=35.5
Q ss_pred ccccccCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 012543 6 ESHMQQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFN 53 (461)
Q Consensus 6 ~~~m~~~~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~ 53 (461)
+|.|...+++++++++.. -.|.-..--.-|+++|++|.=+++...
T Consensus 1 ~~~m~~~~~l~~avVCaS---N~NRSMEaH~~L~k~G~~V~SfGTGs~ 45 (198)
T 3p9y_A 1 GSHMTDPSKLAVAVVDSS---NMNRSMEAHNFLAKKGFNVRSYGTGER 45 (198)
T ss_dssp CCSCCCTTCCEEEEEESS---SSSHHHHHHHHHHHTTCEEEEEECSSS
T ss_pred CCcCCCCCCceEEEEcCC---CCcccHHHHHHHHhCCCceeecCCCce
Confidence 467887888999999854 455667777888999999998888644
No 277
>2qh8_A Uncharacterized protein; conserved domain protein, structural genomics, PSI-2, MCSG, BIG_563.1, protein structure initiative; HET: HIS; 2.20A {Vibrio cholerae o1 biovar eltor str} PDB: 3lkv_A*
Probab=25.12 E-value=3.3e+02 Score=23.78 Aligned_cols=30 Identities=17% Similarity=0.057 Sum_probs=18.3
Q ss_pred CCccEEEeCCCchhhHHHHHHcCCCeEEEe
Q 012543 114 EPIACLITDASWFFTHDVAESLKLPRIVLR 143 (461)
Q Consensus 114 ~~pDlvi~D~~~~~a~~~A~~lgiP~v~~~ 143 (461)
.++|.||.-.............++|+|.+.
T Consensus 68 ~~vDgII~~~~~~~~~~~~~~~~iPvV~~~ 97 (302)
T 2qh8_A 68 ENPDVLVGIATPTAQALVSATKTIPIVFTA 97 (302)
T ss_dssp TCCSEEEEESHHHHHHHHHHCSSSCEEEEE
T ss_pred CCCCEEEECChHHHHHHHhcCCCcCEEEEe
Confidence 789999975322111112235699999875
No 278
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=25.10 E-value=69 Score=27.87 Aligned_cols=37 Identities=14% Similarity=0.136 Sum_probs=28.1
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
...+++.+|..|+..-...+++.|.++|++|..+-..
T Consensus 46 ~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 82 (315)
T 4f0j_A 46 GRTILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQV 82 (315)
T ss_dssp SCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCT
T ss_pred CCeEEEEcCCCCcchHHHHHHHHHHHCCCeEEEeecC
Confidence 3455555566677777889999999999999887653
No 279
>2r79_A Periplasmic binding protein; heme transport, transport prote; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=25.02 E-value=68 Score=28.34 Aligned_cols=37 Identities=14% Similarity=-0.056 Sum_probs=24.9
Q ss_pred HHHHHhhcccccCCCCccEEEeCCCc--hhhHHHHHHcCCCeEEEe
Q 012543 100 CLAKLLSNAEEKEEEPIACLITDASW--FFTHDVAESLKLPRIVLR 143 (461)
Q Consensus 100 ~~~~l~~~~~~~~~~~pDlvi~D~~~--~~a~~~A~~lgiP~v~~~ 143 (461)
.+|++.. .+||+||..... ......-++.|||++.+.
T Consensus 51 n~E~i~~-------l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (283)
T 2r79_A 51 AAEGVLA-------LRPDILIGTEEMGPPPVLKQLEGAGVRVETLS 89 (283)
T ss_dssp CHHHHHT-------TCCSEEEECTTCCCHHHHHHHHHTTCCEEECC
T ss_pred CHHHHHh-------cCCCEEEEeCccCcHHHHHHHHHcCCcEEEec
Confidence 3566666 789999987533 223344567899998863
No 280
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=24.94 E-value=71 Score=29.01 Aligned_cols=37 Identities=14% Similarity=0.020 Sum_probs=31.6
Q ss_pred eEEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012543 16 RLILFP-LPFQGHINPMLQLANILYSKGFSITIIHTKF 52 (461)
Q Consensus 16 ~il~~~-~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~ 52 (461)
+|+|+. -|+-|-..-...||..|+++|++|.++..+.
T Consensus 15 ~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 15 TFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred EEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 555544 4799999999999999999999999999864
No 281
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=24.83 E-value=69 Score=27.86 Aligned_cols=36 Identities=14% Similarity=0.169 Sum_probs=31.1
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 16 RLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 16 ~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
.|.|..-|+-|-..-...||..|+++|++|.++-.+
T Consensus 3 vI~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D 38 (269)
T 1cp2_A 3 QVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred EEEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCC
Confidence 566666688999999999999999999999998664
No 282
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=24.81 E-value=79 Score=29.19 Aligned_cols=40 Identities=15% Similarity=0.059 Sum_probs=32.9
Q ss_pred CCCCeEEEE-cCCCccCHHHHHHHHHHHH--hCCCeEEEEeCC
Q 012543 12 KKGRRLILF-PLPFQGHINPMLQLANILY--SKGFSITIIHTK 51 (461)
Q Consensus 12 ~~~~~il~~-~~~~~GHi~p~l~La~~L~--~rGh~V~~~~~~ 51 (461)
++.++|+++ .-|+-|-..-...||..|+ ++|++|.++..+
T Consensus 15 ~~~~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D 57 (348)
T 3io3_A 15 HDSLKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTD 57 (348)
T ss_dssp CTTCSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECC
T ss_pred CCCcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECC
Confidence 344456555 4589999999999999999 899999999986
No 283
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=24.76 E-value=75 Score=30.48 Aligned_cols=33 Identities=18% Similarity=0.310 Sum_probs=26.6
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 13 KGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
+.+||+|+..|..| +++|+.|+++||+|+..-.
T Consensus 8 ~~k~v~viG~G~sG-----~s~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 8 ENKKVLVLGLARSG-----EAAARLLAKLGAIVTVNDG 40 (451)
T ss_dssp TTCEEEEECCTTTH-----HHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEEeeCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 45699999887765 3469999999999998754
No 284
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=24.73 E-value=57 Score=26.48 Aligned_cols=36 Identities=17% Similarity=0.308 Sum_probs=28.3
Q ss_pred CCeEEEEcCCCcc-----CHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 14 GRRLILFPLPFQG-----HINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 14 ~~~il~~~~~~~G-----Hi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
..+|+++| ++| --++...|++.|.++|.+|.|+.++
T Consensus 30 A~~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 70 (186)
T 2bru_C 30 SHSVIITP--GYGMAVAQAQYPVAEITEKLRARGINVRFGIHP 70 (186)
T ss_dssp CSEEEEEC--SBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECS
T ss_pred CCeEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 35777776 343 2357889999999999999999996
No 285
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=24.68 E-value=1.9e+02 Score=21.63 Aligned_cols=48 Identities=6% Similarity=-0.004 Sum_probs=31.9
Q ss_pred cCCccccCcccchhhhhHHHHHHhhhceeecCCcc-CHHHHHHHHHHHhcc
Q 012543 371 EGVPMICQPCHGEQMVIARYVSDVWKVGLHLERKL-ERGEVERAIRRVMVD 420 (461)
Q Consensus 371 ~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~l~~~~-~~~~l~~~i~~ll~~ 420 (461)
.++|+|++--..+... ..+.-+ .|+--.+.+.. +.++|.++|++++.-
T Consensus 80 ~~~pii~~s~~~~~~~-~~~~~~-~ga~~~l~Kp~~~~~~l~~~i~~~l~~ 128 (144)
T 3kht_A 80 QHTPIVILTDNVSDDR-AKQCMA-AGASSVVDKSSNNVTDFYGRIYAIFSY 128 (144)
T ss_dssp TTCCEEEEETTCCHHH-HHHHHH-TTCSEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHH-HHHHHH-cCCCEEEECCCCcHHHHHHHHHHHHHH
Confidence 3678877765444433 333334 37766666667 999999999998853
No 286
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=24.64 E-value=1.4e+02 Score=26.20 Aligned_cols=43 Identities=9% Similarity=0.091 Sum_probs=27.7
Q ss_pred cccccccCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 5 GESHMQQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 5 ~~~~m~~~~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
.++.|.+-+. |+++++.++ |-+- .+++++|.++|++|+++...
T Consensus 7 ~~~~~~~l~g-k~vlVTGas-~gIG--~~~a~~L~~~G~~V~~~~r~ 49 (291)
T 3rd5_A 7 TAADLPSFAQ-RTVVITGAN-SGLG--AVTARELARRGATVIMAVRD 49 (291)
T ss_dssp CGGGCCCCTT-CEEEEECCS-SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred ChhhccCCCC-CEEEEeCCC-ChHH--HHHHHHHHHCCCEEEEEECC
Confidence 3445544333 455566444 3333 68899999999999998763
No 287
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=24.62 E-value=49 Score=27.72 Aligned_cols=48 Identities=13% Similarity=0.205 Sum_probs=29.3
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEEc
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSPNPSNYPHFTFCSI 68 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~ 68 (461)
|+|+++ |+.|-+- ..++++|.++||+|+.+.-..... ....+++++..
T Consensus 1 M~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~~~~--~~~~~~~~~~~ 48 (219)
T 3dqp_A 1 MKIFIV--GSTGRVG--KSLLKSLSTTDYQIYAGARKVEQV--PQYNNVKAVHF 48 (219)
T ss_dssp CEEEEE--STTSHHH--HHHHHHHTTSSCEEEEEESSGGGS--CCCTTEEEEEC
T ss_pred CeEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEECCccch--hhcCCceEEEe
Confidence 455554 3444443 578999999999999988642211 11145666543
No 288
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=24.50 E-value=81 Score=26.98 Aligned_cols=34 Identities=6% Similarity=0.078 Sum_probs=27.8
Q ss_pred eEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012543 16 RLILFPL-PFQGHINPMLQLANILYSKGFSITIIH 49 (461)
Q Consensus 16 ~il~~~~-~~~GHi~p~l~La~~L~~rGh~V~~~~ 49 (461)
.|++... ++.|-..-...|++.|+++|++|.++=
T Consensus 6 ~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 6 KFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp EEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 4555444 577999999999999999999999863
No 289
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=24.49 E-value=75 Score=27.68 Aligned_cols=33 Identities=15% Similarity=0.062 Sum_probs=26.3
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 16 RLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 16 ~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
|.+++|.++.| =-.++|+.|+++|++|.+....
T Consensus 3 K~vlVTGas~G---IG~aia~~la~~Ga~V~~~~~~ 35 (247)
T 3ged_A 3 RGVIVTGGGHG---IGKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEecCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 77888877665 3358899999999999987653
No 290
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=24.47 E-value=79 Score=25.92 Aligned_cols=44 Identities=9% Similarity=0.041 Sum_probs=26.0
Q ss_pred ccccccCCCCeEEEEcCCCcc----CHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 6 ESHMQQKKGRRLILFPLPFQG----HINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 6 ~~~m~~~~~~~il~~~~~~~G----Hi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
+.||...+ +.|.++.....| ...-...|++.|+++|+.|+.-..
T Consensus 6 ~~~~~~~~-~~VaV~Gs~~~g~~~~~~~~A~~lg~~La~~g~~lVsGGg 53 (176)
T 2iz6_A 6 HGCMSGRK-PIIGVMGPGKADTAENQLVMANELGKQIATHGWILLTGGR 53 (176)
T ss_dssp -----CCC-CEEEEECCCGGGCCHHHHHHHHHHHHHHHHTTCEEEEECS
T ss_pred cccccCCC-CeEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 56887433 567776654422 345666788888899998887555
No 291
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=24.44 E-value=26 Score=27.33 Aligned_cols=59 Identities=8% Similarity=0.060 Sum_probs=35.2
Q ss_pred cCCccccCcccchhhhhHHHHHHhhh-ceeecCCccCHHHHHHHHHHHhcchhHHHHHHHHHHHH
Q 012543 371 EGVPMICQPCHGEQMVIARYVSDVWK-VGLHLERKLERGEVERAIRRVMVDAEGREMRNRAAILK 434 (461)
Q Consensus 371 ~GvP~l~~P~~~DQ~~na~~v~~~lG-~G~~l~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~ 434 (461)
..+|+|++--..+.... ...-+ .| +--.+.+.++.++|..+|++++.. ..+++..+++.
T Consensus 78 ~~~~ii~ls~~~~~~~~-~~~~~-~g~~~~~l~kP~~~~~L~~~i~~~~~~---~~~~~~~~~~~ 137 (154)
T 2rjn_A 78 PDIERVVISGYADAQAT-IDAVN-RGKISRFLLKPWEDEDVFKVVEKGLQL---AFLREENLRLQ 137 (154)
T ss_dssp TTSEEEEEECGGGHHHH-HHHHH-TTCCSEEEESSCCHHHHHHHHHHHHHH---HHHHHHTTSCC
T ss_pred CCCcEEEEecCCCHHHH-HHHHh-ccchheeeeCCCCHHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 46788777554443333 33333 25 533444468999999999999976 44444433333
No 292
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=24.40 E-value=64 Score=27.53 Aligned_cols=38 Identities=8% Similarity=-0.017 Sum_probs=30.7
Q ss_pred eEEEEc-CCCccCHHHHHHHHHHHHhC-CCeEEEEeCCCC
Q 012543 16 RLILFP-LPFQGHINPMLQLANILYSK-GFSITIIHTKFN 53 (461)
Q Consensus 16 ~il~~~-~~~~GHi~p~l~La~~L~~r-Gh~V~~~~~~~~ 53 (461)
.|.|+. -|+-|-..-...||..|+++ |++|.++-.+..
T Consensus 6 vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 6 VFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISLP 45 (245)
T ss_dssp EEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCTT
T ss_pred EEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCCC
Confidence 444443 37889999999999999999 999999877533
No 293
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=24.39 E-value=75 Score=24.65 Aligned_cols=36 Identities=11% Similarity=0.358 Sum_probs=26.4
Q ss_pred eEEEEcCCCccCHHHHH-HHHHHHHhCCCeEEEEeCC
Q 012543 16 RLILFPLPFQGHINPML-QLANILYSKGFSITIIHTK 51 (461)
Q Consensus 16 ~il~~~~~~~GHi~p~l-~La~~L~~rGh~V~~~~~~ 51 (461)
+|+++-...+|+..-+. .|++.|.++|++|.++...
T Consensus 3 ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 39 (148)
T 3f6r_A 3 KVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAA 39 (148)
T ss_dssp EEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETT
T ss_pred eEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehh
Confidence 67666666778876555 4677788889999987664
No 294
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=24.36 E-value=1.1e+02 Score=27.57 Aligned_cols=44 Identities=25% Similarity=0.370 Sum_probs=28.7
Q ss_pred ccccCCCCeEEEEcCCCcc--CH-HHHHHHHHHHHhCCCeEEEEeCC
Q 012543 8 HMQQKKGRRLILFPLPFQG--HI-NPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 8 ~m~~~~~~~il~~~~~~~G--Hi-~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
+|...+.+|++++..|..| .. .-.-.+...|.++|+++.+..+.
T Consensus 2 ~m~~~~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~ 48 (304)
T 3s40_A 2 HMTKTKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTK 48 (304)
T ss_dssp ---CCSCSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECC
T ss_pred CCccCCCCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEcc
Confidence 5665566688877777444 43 23346777888899999988765
No 295
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=24.34 E-value=21 Score=34.55 Aligned_cols=33 Identities=24% Similarity=0.317 Sum_probs=27.6
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
.|||+++..|..|. .||+.|.+.||+|+++-..
T Consensus 3 ~M~iiI~G~G~vG~-----~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 3 AMKIIILGAGQVGG-----TLAENLVGENNDITIVDKD 35 (461)
T ss_dssp CEEEEEECCSHHHH-----HHHHHTCSTTEEEEEEESC
T ss_pred cCEEEEECCCHHHH-----HHHHHHHHCCCCEEEEECC
Confidence 47999998876663 6899999999999998764
No 296
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=24.34 E-value=69 Score=27.72 Aligned_cols=37 Identities=27% Similarity=0.319 Sum_probs=24.3
Q ss_pred CCeEEEEcCCCccCH--HHHHHHHHHHHhCCCeEEEEeC
Q 012543 14 GRRLILFPLPFQGHI--NPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 14 ~~~il~~~~~~~GHi--~p~l~La~~L~~rGh~V~~~~~ 50 (461)
+.-++++.+|+.+|- ..+..+|+.|+++|+.|..+-.
T Consensus 55 ~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~ 93 (259)
T 4ao6_A 55 SDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDG 93 (259)
T ss_dssp CSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECC
T ss_pred CCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeecc
Confidence 446777777777773 3577899999999999887655
No 297
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=24.31 E-value=69 Score=27.52 Aligned_cols=38 Identities=13% Similarity=0.007 Sum_probs=24.8
Q ss_pred HHHHHhhcccccCCCCccEEEeCCCc--hhhHHHHHHcCCCeEEEec
Q 012543 100 CLAKLLSNAEEKEEEPIACLITDASW--FFTHDVAESLKLPRIVLRS 144 (461)
Q Consensus 100 ~~~~l~~~~~~~~~~~pDlvi~D~~~--~~a~~~A~~lgiP~v~~~~ 144 (461)
.+|++.. .+||+||..... .....--++.|||++.+..
T Consensus 49 n~E~i~~-------l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~ 88 (245)
T 1n2z_A 49 NLERIVA-------LKPDLVIAWRGGNAERQVDQLASLGIKVMWVDA 88 (245)
T ss_dssp CHHHHHH-------TCCSEEEECTTTSCHHHHHHHHHHTCCEEECCC
T ss_pred CHHHHhc-------cCCCEEEEeCCCCcHHHHHHHHHCCCcEEEeCC
Confidence 3566666 789999985322 2233444678999987654
No 298
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=24.28 E-value=93 Score=26.34 Aligned_cols=35 Identities=17% Similarity=0.240 Sum_probs=26.5
Q ss_pred eEEEEcCCCccC--HHHHHHHHHHHHhCCCeEEEEeC
Q 012543 16 RLILFPLPFQGH--INPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 16 ~il~~~~~~~GH--i~p~l~La~~L~~rGh~V~~~~~ 50 (461)
..+++.+|..|+ ..-...+++.|.++|++|..+--
T Consensus 28 p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~ 64 (251)
T 2wtm_A 28 PLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADM 64 (251)
T ss_dssp EEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecC
Confidence 455566677777 66778899999999999877544
No 299
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1
Probab=24.21 E-value=77 Score=21.47 Aligned_cols=52 Identities=10% Similarity=0.158 Sum_probs=32.7
Q ss_pred ccCHHHHHHHHHHHhcchh--HHHHHHHHHHHHHHH-HHHhhcCCChHHHHHHHHHHH
Q 012543 404 KLERGEVERAIRRVMVDAE--GREMRNRAAILKEKL-DLCTKQGSSSYQSLENLISYI 458 (461)
Q Consensus 404 ~~~~~~l~~~i~~ll~~~~--~~~~~~~a~~l~~~~-~~~~~~~g~~~~~~~~l~~~l 458 (461)
..|.++|.++|+++|...+ .-+.++=.+.+.+++ . .+-.....+++.++..+
T Consensus 11 ~Psd~ei~~~I~~IL~~aDL~tvT~K~VR~~Le~~~pg---~dLs~kK~~I~~~I~~~ 65 (70)
T 1q1v_A 11 PPTDEELKETIKKLLASANLEEVTMKQICKKVYENYPT---YDLTERKDFIKTTVKEL 65 (70)
T ss_dssp CCCHHHHHHHHHHHHTTSCGGGCCHHHHHHHHHHHCSS---SCCSHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHccC---CCChHHHHHHHHHHHHH
Confidence 4689999999999998744 223444444444444 2 14455566777776654
No 300
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=24.21 E-value=89 Score=27.83 Aligned_cols=40 Identities=15% Similarity=0.192 Sum_probs=31.2
Q ss_pred CCCeEEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012543 13 KGRRLILFP-LPFQGHINPMLQLANILYSKGFSITIIHTKF 52 (461)
Q Consensus 13 ~~~~il~~~-~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~ 52 (461)
+.+.|+|+. -|+-|-..-...||..|+++|.+|.++-.+.
T Consensus 91 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 131 (286)
T 3la6_A 91 QNNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDM 131 (286)
T ss_dssp TCCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCT
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccC
Confidence 334444443 3688999999999999999999999987753
No 301
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=24.16 E-value=81 Score=28.04 Aligned_cols=33 Identities=18% Similarity=0.237 Sum_probs=25.0
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 13 KGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
++++|.|+..|..|. .+++.|.+.||+|+++..
T Consensus 3 ~~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 3 KSIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp -CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 357999998776664 467888899999987654
No 302
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=24.05 E-value=1.2e+02 Score=27.08 Aligned_cols=37 Identities=16% Similarity=0.271 Sum_probs=25.1
Q ss_pred CCeEEE-EcCCCccCHHHHH--HHHHHHHhCCCeEEEEeC
Q 012543 14 GRRLIL-FPLPFQGHINPML--QLANILYSKGFSITIIHT 50 (461)
Q Consensus 14 ~~~il~-~~~~~~GHi~p~l--~La~~L~~rGh~V~~~~~ 50 (461)
.||||+ ..+|-..-++-.+ .+.+.|.++||+|++.--
T Consensus 22 ~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~DL 61 (280)
T 4gi5_A 22 SMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSDL 61 (280)
T ss_dssp CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEET
T ss_pred CCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEEc
Confidence 566655 5666655555433 467888899999998643
No 303
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=23.95 E-value=1.5e+02 Score=23.46 Aligned_cols=37 Identities=11% Similarity=0.205 Sum_probs=29.2
Q ss_pred CCeEEEEcCCCccCHHHHH-HHHHHHHhCCCeEEEEeC
Q 012543 14 GRRLILFPLPFQGHINPML-QLANILYSKGFSITIIHT 50 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l-~La~~L~~rGh~V~~~~~ 50 (461)
..+|+++-...+|+..-+. .|++.|.+.|++|.++..
T Consensus 4 ~~kv~IvY~S~~GnT~~iA~~ia~~l~~~g~~v~~~~~ 41 (159)
T 3fni_A 4 ETSIGVFYVSEYGYSDRLAQAIINGITKTGVGVDVVDL 41 (159)
T ss_dssp CCEEEEEECTTSTTHHHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEEEECCChHHHHHHHHHHHHHHHCCCeEEEEEC
Confidence 4577777677789998877 568889999999988665
No 304
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=23.89 E-value=35 Score=30.11 Aligned_cols=39 Identities=8% Similarity=-0.029 Sum_probs=34.1
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHH--------HHhC-CCeEEEEeCC
Q 012543 13 KGRRLILFPLPFQGHINPMLQLANI--------LYSK-GFSITIIHTK 51 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~p~l~La~~--------L~~r-Gh~V~~~~~~ 51 (461)
++.+|++.+.++-.|-....-++.- |... |++|+.+...
T Consensus 119 ~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~ 166 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQ 166 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSS
T ss_pred CCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCC
Confidence 4678999999999999999988877 9999 9999998774
No 305
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=23.77 E-value=1.1e+02 Score=25.51 Aligned_cols=33 Identities=21% Similarity=0.473 Sum_probs=24.4
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
++|+++ |+.|.+- ..|++.|.++||+|+.++..
T Consensus 5 ~~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 5 KKIVLI--GASGFVG--SALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CEEEEE--TCCHHHH--HHHHHHHHTTTCEEEEECSC
T ss_pred CEEEEE--cCCchHH--HHHHHHHHHCCCEEEEEEcC
Confidence 466655 4555554 47889999999999998764
No 306
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=23.76 E-value=67 Score=26.72 Aligned_cols=36 Identities=17% Similarity=0.237 Sum_probs=27.7
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
...+++.+|..|+..-+..+++.|.++|+.|..+-.
T Consensus 22 ~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~ 57 (251)
T 3dkr_A 22 DTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPLF 57 (251)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCC
T ss_pred CceEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecCC
Confidence 345566667777777889999999999999876433
No 307
>3se7_A VANA; alpha-beta structure, D-alanine-D-lactate ligase, ligase; HET: ATP; 3.07A {}
Probab=23.63 E-value=47 Score=30.53 Aligned_cols=39 Identities=8% Similarity=-0.021 Sum_probs=29.0
Q ss_pred CCCeEEEEcCCCccC----HHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 13 KGRRLILFPLPFQGH----INPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 13 ~~~~il~~~~~~~GH----i~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
+++||+++..|..+- +....+++++|.+.||+|+.+...
T Consensus 2 ~~~~v~vl~GG~s~e~~vSl~sa~~v~~al~~~g~~v~~i~~~ 44 (346)
T 3se7_A 2 SHMKIGIIFGGVSEEHDISVKSAREVATHLGTGVFEPFYLGIT 44 (346)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCCEEEEEeeecCCCccHHHHHHHHHHHHhcccCCEEEEEEEC
Confidence 467888887554332 456678899999999999988763
No 308
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=23.56 E-value=78 Score=26.78 Aligned_cols=32 Identities=19% Similarity=0.267 Sum_probs=23.0
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 16 RLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 16 ~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
+.++++ |+.|-+ -.++++.|.++||+|+++..
T Consensus 6 k~vlVt-Gasggi--G~~~a~~l~~~G~~V~~~~r 37 (234)
T 2ehd_A 6 GAVLIT-GASRGI--GEATARLLHAKGYRVGLMAR 37 (234)
T ss_dssp CEEEES-STTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEE-CCCcHH--HHHHHHHHHHCCCEEEEEEC
Confidence 456666 344433 35789999999999998765
No 309
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=23.53 E-value=1.2e+02 Score=22.15 Aligned_cols=33 Identities=15% Similarity=0.223 Sum_probs=23.3
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
...|++++.. | ......++.|.+.|++|..+..
T Consensus 55 ~~~ivvyC~~--G--~rs~~aa~~L~~~G~~v~~l~G 87 (108)
T 3gk5_A 55 DKKYAVICAH--G--NRSAAAVEFLSQLGLNIVDVEG 87 (108)
T ss_dssp TSCEEEECSS--S--HHHHHHHHHHHTTTCCEEEETT
T ss_pred CCeEEEEcCC--C--cHHHHHHHHHHHcCCCEEEEcC
Confidence 4567777733 3 3456778999999998887754
No 310
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=23.53 E-value=70 Score=29.80 Aligned_cols=37 Identities=14% Similarity=0.156 Sum_probs=28.6
Q ss_pred CCeEEEEcCCCcc-C---HHHHHHHHHHH-HhCCCeEEEEeC
Q 012543 14 GRRLILFPLPFQG-H---INPMLQLANIL-YSKGFSITIIHT 50 (461)
Q Consensus 14 ~~~il~~~~~~~G-H---i~p~l~La~~L-~~rGh~V~~~~~ 50 (461)
++||+++..|..+ | +....+++++| .++||+|+.+..
T Consensus 3 k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~ 44 (377)
T 1ehi_A 3 KKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAI 44 (377)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEE
T ss_pred CcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEE
Confidence 5789888766444 3 33578899999 999999998865
No 311
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=23.46 E-value=84 Score=27.01 Aligned_cols=33 Identities=18% Similarity=0.128 Sum_probs=24.2
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 16 RLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 16 ~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
|.++++.++.| + -.++++.|.++|++|+++...
T Consensus 3 k~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~r~ 35 (247)
T 3dii_A 3 RGVIVTGGGHG-I--GKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp CEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 66777755443 3 357899999999999987653
No 312
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=23.40 E-value=57 Score=27.53 Aligned_cols=32 Identities=16% Similarity=0.142 Sum_probs=23.5
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
.++|+++..|..| ..+++.|.+.||+|+++..
T Consensus 28 ~~~I~iiG~G~~G-----~~la~~l~~~g~~V~~~~r 59 (215)
T 2vns_A 28 APKVGILGSGDFA-----RSLATRLVGSGFKVVVGSR 59 (215)
T ss_dssp -CCEEEECCSHHH-----HHHHHHHHHTTCCEEEEES
T ss_pred CCEEEEEccCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 4689988655444 4578889999999998765
No 313
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=23.33 E-value=69 Score=24.74 Aligned_cols=47 Identities=4% Similarity=0.115 Sum_probs=33.6
Q ss_pred cCCccccCcccchhhhhHHHHHHhhhceeecCCccCHHHHHHHHHHHhc
Q 012543 371 EGVPMICQPCHGEQMVIARYVSDVWKVGLHLERKLERGEVERAIRRVMV 419 (461)
Q Consensus 371 ~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~l~~~i~~ll~ 419 (461)
..+|+|++--..+... ..+..+ .|+--.+.+.++.++|.++|++++.
T Consensus 86 ~~ipvI~lTa~~~~~~-~~~~~~-~Ga~~yl~KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 86 KHLPVLMITAEAKREQ-IIEAAQ-AGVNGYIVKPFTAATLKEKLDKIFE 132 (134)
T ss_dssp TTCCEEEEESSCCHHH-HHHHHH-TTCCEEEESSCCHHHHHHHHHHHCC
T ss_pred CCCeEEEEECCCCHHH-HHHHHH-CCCCEEEECCCCHHHHHHHHHHHHh
Confidence 4688888765555544 444444 4887677667999999999999874
No 314
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=23.32 E-value=98 Score=26.71 Aligned_cols=33 Identities=12% Similarity=0.038 Sum_probs=24.6
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
.++++++.++.| + -.++|+.|.++|++|.++..
T Consensus 7 ~k~vlVTGas~G-I--G~aia~~l~~~G~~V~~~~r 39 (252)
T 3h7a_A 7 NATVAVIGAGDY-I--GAEIAKKFAAEGFTVFAGRR 39 (252)
T ss_dssp SCEEEEECCSSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCch-H--HHHHHHHHHHCCCEEEEEeC
Confidence 466777755543 3 46889999999999998765
No 315
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=23.30 E-value=66 Score=27.26 Aligned_cols=34 Identities=15% Similarity=0.130 Sum_probs=22.9
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
||+++++.++ |-+ -.++++.|.++|++|.++...
T Consensus 1 Mk~vlVTGas-~gI--G~~~a~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 1 MSLIVITGAS-SGL--GAELAKLYDAEGKATYLTGRS 34 (230)
T ss_dssp --CEEEESTT-SHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEecCC-chH--HHHHHHHHHHCCCEEEEEeCC
Confidence 3556666444 333 357899999999999987753
No 316
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=23.26 E-value=77 Score=27.24 Aligned_cols=37 Identities=16% Similarity=0.138 Sum_probs=28.2
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
+..++++.+|..++..-...+++.|.++|++|..+-.
T Consensus 41 ~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 77 (303)
T 3pe6_A 41 PKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDH 77 (303)
T ss_dssp CSEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECC
T ss_pred CCeEEEEECCCCchhhHHHHHHHHHHhCCCcEEEeCC
Confidence 3456666667677777778899999999999887655
No 317
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=23.24 E-value=85 Score=27.03 Aligned_cols=34 Identities=15% Similarity=0.103 Sum_probs=24.8
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
.+.++++.++. -+ -.++|++|.++|++|+++...
T Consensus 22 ~k~vlITGas~-gI--G~~la~~l~~~G~~V~~~~r~ 55 (251)
T 3orf_A 22 SKNILVLGGSG-AL--GAEVVKFFKSKSWNTISIDFR 55 (251)
T ss_dssp CCEEEEETTTS-HH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCC-HH--HHHHHHHHHHCCCEEEEEeCC
Confidence 36677775443 23 368899999999999987763
No 318
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=23.22 E-value=44 Score=32.70 Aligned_cols=33 Identities=9% Similarity=0.332 Sum_probs=26.7
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
|.||+++..|.-| +.+|+.|..+|++||++...
T Consensus 42 KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~ 74 (502)
T 4g6h_A 42 KPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPR 74 (502)
T ss_dssp SCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESS
T ss_pred CCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCC
Confidence 5689999866444 57889999999999999874
No 319
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=23.09 E-value=84 Score=30.80 Aligned_cols=37 Identities=14% Similarity=0.267 Sum_probs=30.8
Q ss_pred CeEEEEcCC---CccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 15 RRLILFPLP---FQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 15 ~~il~~~~~---~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
+|.+|+|.| +.|-=.-.-+|++-|++||++||..=-+
T Consensus 3 ~k~i~vtggv~s~lgkgi~~as~g~ll~~~g~~v~~~k~d 42 (535)
T 3nva_A 3 NKYIVVTGGVLSSVGKGTLVASIGMLLKRRGYNVTAVKID 42 (535)
T ss_dssp CEEEEEECCCSTTTTHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ceEEEEeCccccCcchHHHHHHHHHHHHHCCceEEEEecC
Confidence 488888875 5677788899999999999999987554
No 320
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=23.08 E-value=85 Score=27.45 Aligned_cols=40 Identities=15% Similarity=0.280 Sum_probs=25.7
Q ss_pred cccCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 9 MQQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 9 m~~~~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
|....+.|+++++.++.| + -.++|++|.++|++|.++...
T Consensus 10 m~~~~~~k~vlVTGas~g-I--G~aia~~l~~~G~~V~~~~r~ 49 (266)
T 3p19_A 10 MGRGSMKKLVVITGASSG-I--GEAIARRFSEEGHPLLLLARR 49 (266)
T ss_dssp -----CCCEEEEESTTSH-H--HHHHHHHHHHTTCCEEEEESC
T ss_pred CCCCCCCCEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEECC
Confidence 443334577777755443 3 357899999999999998763
No 321
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=23.05 E-value=49 Score=29.64 Aligned_cols=32 Identities=16% Similarity=0.050 Sum_probs=26.3
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
+++|.|+..|..|. .+|+.|.++||+|+++..
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDI 46 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 46899998877764 688999999999998754
No 322
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=23.00 E-value=81 Score=25.94 Aligned_cols=36 Identities=11% Similarity=0.157 Sum_probs=26.3
Q ss_pred CCeEEEEcCCCccCHHHHHH-HHHHHHhCCCeEEEEeC
Q 012543 14 GRRLILFPLPFQGHINPMLQ-LANILYSKGFSITIIHT 50 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~-La~~L~~rGh~V~~~~~ 50 (461)
+|||+++-.. .|+..-+.. +++.|.+.|++|.++.-
T Consensus 4 mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l 40 (199)
T 2zki_A 4 KPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRV 40 (199)
T ss_dssp CCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred CcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEeh
Confidence 3588887777 888766654 46667778999988765
No 323
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=22.90 E-value=83 Score=27.80 Aligned_cols=36 Identities=14% Similarity=0.135 Sum_probs=31.2
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 16 RLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 16 ~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
.|.|..-|+-|-..-...||..|+++|++|.++-.+
T Consensus 4 vIavs~KGGvGKTT~a~nLA~~La~~G~rVlliD~D 39 (289)
T 2afh_E 4 QCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCD 39 (289)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred EEEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 666666688999999999999999999999998664
No 324
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=22.80 E-value=51 Score=28.91 Aligned_cols=31 Identities=23% Similarity=0.337 Sum_probs=23.9
Q ss_pred EEEcCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 012543 18 ILFPLPFQGHINPMLQLANILYSKGFSITII 48 (461)
Q Consensus 18 l~~~~~~~GHi~p~l~La~~L~~rGh~V~~~ 48 (461)
+++.+|..|+-.-+..+++.|+++|++|...
T Consensus 54 VlllHG~~~s~~~~~~la~~La~~Gy~Via~ 84 (281)
T 4fbl_A 54 VLVSHGFTGSPQSMRFLAEGFARAGYTVATP 84 (281)
T ss_dssp EEEECCTTCCGGGGHHHHHHHHHTTCEEEEC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 3344676777777788999999999998764
No 325
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=22.70 E-value=54 Score=26.65 Aligned_cols=33 Identities=12% Similarity=0.105 Sum_probs=24.9
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSK-GFSITIIHTK 51 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~r-Gh~V~~~~~~ 51 (461)
+++|+++..|..| ..+++.|.++ ||+|+++...
T Consensus 39 ~~~v~IiG~G~~G-----~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 39 HAQVLILGMGRIG-----TGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp TCSEEEECCSHHH-----HHHHHHHHHHHCSCEEEEESC
T ss_pred CCcEEEECCCHHH-----HHHHHHHHhccCCeEEEEECC
Confidence 5688888654444 5678899999 9999998764
No 326
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=22.63 E-value=2.7e+02 Score=22.29 Aligned_cols=54 Identities=4% Similarity=-0.042 Sum_probs=34.5
Q ss_pred HHHHhh---cCCccccCcccchhhhhHHHHHHhhhceeecCCccCHHHHHHHHHHHhcc
Q 012543 365 TLESMC---EGVPMICQPCHGEQMVIARYVSDVWKVGLHLERKLERGEVERAIRRVMVD 420 (461)
Q Consensus 365 ~~eal~---~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~l~~~i~~ll~~ 420 (461)
+.+.+. ..+|+|++--..|.. .+...-+ .|+--.+.+.++.++|..+|+.++..
T Consensus 69 l~~~~~~~~~~~~ii~lt~~~~~~-~~~~a~~-~ga~~~l~KP~~~~~L~~~l~~~~~~ 125 (196)
T 1qo0_D 69 IAALLAAGTPRTTLVALVEYESPA-VLSQIIE-LECHGVITQPLDAHRVLPVLVSARRI 125 (196)
T ss_dssp HHHHHHHSCTTCEEEEEECCCSHH-HHHHHHH-HTCSEEEESSCCGGGHHHHHHHHHHH
T ss_pred HHHHHhccCCCCCEEEEEcCCChH-HHHHHHH-cCCCeeEecCcCHHHHHHHHHHHHHH
Confidence 444444 457777775554443 4444444 37765555568889999999988865
No 327
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=22.63 E-value=4.6e+02 Score=27.42 Aligned_cols=81 Identities=9% Similarity=0.019 Sum_probs=42.9
Q ss_pred cccccCchHHHHHhhcC-Cc--c--ccCcccchhhhhHHHHHHhhhceeecCCccCHHHHHHHHHHHhcchhHHHHHHHH
Q 012543 356 FWTHCGWNSTLESMCEG-VP--M--ICQPCHGEQMVIARYVSDVWKVGLHLERKLERGEVERAIRRVMVDAEGREMRNRA 430 (461)
Q Consensus 356 ~I~HGG~gs~~eal~~G-vP--~--l~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~l~~~i~~ll~~~~~~~~~~~a 430 (461)
|+.||--+.++|.++-. .| + +.+|-.++--.-...++.. .++.+.|.+++.+++....+..+++..
T Consensus 727 ~~~gGlgsaV~ell~~r~~~~~l~v~G~~d~G~tgtp~eLl~~~---------gld~~~Iv~~a~~~l~~~~~~~~~~~~ 797 (845)
T 3ahc_A 727 FAYHSYAQDVRGLIYDRPNHDNFHVVGYKEQGSTTTPFDMVRVN---------DMDRYALQAAALKLIDADKYADKIDEL 797 (845)
T ss_dssp EEESSCHHHHHHHTTTSTTGGGEEEECCCSCCCSCCHHHHHHTT---------TCSHHHHHHHHHHHHHTTTTHHHHHHH
T ss_pred eeecCcHHHHHHHHHhCCCCceEEEEeccCCCCCCCHHHHHHHh---------CcCHHHHHHHHHHHcchhhHHHHHHHH
Confidence 44677777778877765 33 3 3333222111122222221 578899999988888632234455555
Q ss_pred HHHHHHHHHHhhcCC
Q 012543 431 AILKEKLDLCTKQGS 445 (461)
Q Consensus 431 ~~l~~~~~~~~~~~g 445 (461)
+....+.++.+++.|
T Consensus 798 ~~~~~~~~~~~~~~g 812 (845)
T 3ahc_A 798 NAFRKKAFQFAVDNG 812 (845)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhC
Confidence 555555544443433
No 328
>3h99_A Methionyl-tRNA synthetase; rossmann fold, aminoacyl-tRNA synthetase, ATP-binding, ligas binding, nucleotide-binding, protein biosynthesis; HET: CIT; 1.40A {Escherichia coli} PDB: 3h97_A* 3h9b_A* 1f4l_A 3h9c_A* 1pfv_A* 1pfu_A 1p7p_A* 1pfw_A* 1pfy_A* 1pg0_A* 1pg2_A* 1qqt_A 1mea_A 1med_A
Probab=22.61 E-value=69 Score=31.80 Aligned_cols=46 Identities=17% Similarity=0.296 Sum_probs=25.8
Q ss_pred cccccccCCCCeEEEEcCCC------ccCHHHHH---HHHHHHHhCCCeEEEEeC
Q 012543 5 GESHMQQKKGRRLILFPLPF------QGHINPML---QLANILYSKGFSITIIHT 50 (461)
Q Consensus 5 ~~~~m~~~~~~~il~~~~~~------~GHi~p~l---~La~~L~~rGh~V~~~~~ 50 (461)
++-+|.++++.-++..+.|. .||....+ .|++.|+.+|++|.++..
T Consensus 9 ~~~~~~~~~~~~~v~~~~py~ng~lHiGH~r~~v~~D~laR~~r~~G~~V~~~~g 63 (560)
T 3h99_A 9 HHGSMTQVAKKILVTCASPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICA 63 (560)
T ss_dssp --------CCEEEEEECCCBTTSCCBHHHHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCCCCCCcEEEeCCCCCCCCCcchhhHHHHHHHHHHHHHHHHcCCeEEEeee
Confidence 34445544444444444343 38888766 378888889999999775
No 329
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=22.59 E-value=52 Score=29.69 Aligned_cols=31 Identities=13% Similarity=0.035 Sum_probs=25.6
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
|||+++..|+.|- .+|..|. .||+|+++...
T Consensus 3 mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 3 LKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp CEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSC
T ss_pred CEEEEECCCHHHH-----HHHHHHh-cCCceEEEECC
Confidence 6999998887774 5678888 99999998764
No 330
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=22.50 E-value=85 Score=27.26 Aligned_cols=34 Identities=12% Similarity=0.084 Sum_probs=24.3
Q ss_pred CeEEEEcCCCcc-CHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 15 RRLILFPLPFQG-HINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 15 ~~il~~~~~~~G-Hi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
.|++++|..+.+ =| -.++|+.|+++|++|.+...
T Consensus 6 gK~alVTGaa~~~GI--G~aiA~~la~~Ga~Vvi~~r 40 (256)
T 4fs3_A 6 NKTYVIMGIANKRSI--AFGVAKVLDQLGAKLVFTYR 40 (256)
T ss_dssp TCEEEEECCCSTTCH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCCchH--HHHHHHHHHHCCCEEEEEEC
Confidence 467777753221 12 37899999999999998765
No 331
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=22.50 E-value=1.2e+02 Score=23.60 Aligned_cols=37 Identities=11% Similarity=0.050 Sum_probs=26.2
Q ss_pred eEEE-EcCCCccCHHH--HHHHHHHHHhCCCeEEEEeCCC
Q 012543 16 RLIL-FPLPFQGHINP--MLQLANILYSKGFSITIIHTKF 52 (461)
Q Consensus 16 ~il~-~~~~~~GHi~p--~l~La~~L~~rGh~V~~~~~~~ 52 (461)
++++ ++.+-+|+... .+.+|..+.+.||+|.++-...
T Consensus 7 k~~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~D 46 (136)
T 2hy5_B 7 KFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLDD 46 (136)
T ss_dssp EEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECGG
T ss_pred EEEEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEhH
Confidence 4544 55566676444 5777999999999999877653
No 332
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=22.48 E-value=1e+02 Score=26.39 Aligned_cols=32 Identities=19% Similarity=0.112 Sum_probs=22.6
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 16 RLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 16 ~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
|.++++.++ |-+ -.++++.|.++|++|+++..
T Consensus 2 k~vlVTGas-~gI--G~~~a~~l~~~G~~V~~~~r 33 (257)
T 1fjh_A 2 SIIVISGCA-TGI--GAATRKVLEAAGHQIVGIDI 33 (257)
T ss_dssp CEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-CHH--HHHHHHHHHHCCCEEEEEeC
Confidence 455666443 333 35789999999999998765
No 333
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=22.43 E-value=85 Score=27.51 Aligned_cols=34 Identities=9% Similarity=0.040 Sum_probs=24.3
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
++.++++.++ |-+- .+++++|.++|++|+.+...
T Consensus 5 ~k~vlVTGas-~gIG--~~~a~~l~~~G~~V~~~~r~ 38 (281)
T 3m1a_A 5 AKVWLVTGAS-SGFG--RAIAEAAVAAGDTVIGTARR 38 (281)
T ss_dssp CCEEEETTTT-SHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEEECCC-ChHH--HHHHHHHHHCCCEEEEEeCC
Confidence 3667777444 4333 47889999999999987653
No 334
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=22.41 E-value=72 Score=27.55 Aligned_cols=34 Identities=21% Similarity=0.275 Sum_probs=26.1
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 13 KGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
..++|.|+..|..| .++|+.|.++||+|++....
T Consensus 18 ~~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 18 QGMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 46799999766544 46789999999999987653
No 335
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=22.38 E-value=83 Score=26.96 Aligned_cols=32 Identities=16% Similarity=0.201 Sum_probs=23.1
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 16 RLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 16 ~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
+.++++ |+.|-+- .++++.|.++|++|+++..
T Consensus 8 k~vlVT-GasggiG--~~~a~~l~~~G~~V~~~~r 39 (258)
T 3afn_B 8 KRVLIT-GSSQGIG--LATARLFARAGAKVGLHGR 39 (258)
T ss_dssp CEEEET-TCSSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEe-CCCChHH--HHHHHHHHHCCCEEEEECC
Confidence 455666 4445443 4689999999999998765
No 336
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=22.24 E-value=67 Score=26.77 Aligned_cols=31 Identities=26% Similarity=0.168 Sum_probs=22.2
Q ss_pred CeEEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 15 RRLILFP-LPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 15 ~~il~~~-~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
|+|+++. .|..| ..+++.|.++||+|+++..
T Consensus 1 m~i~iiGa~G~~G-----~~ia~~l~~~g~~V~~~~r 32 (212)
T 1jay_A 1 MRVALLGGTGNLG-----KGLALRLATLGHEIVVGSR 32 (212)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHTTTCEEEEEES
T ss_pred CeEEEEcCCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 4677774 44333 4678899999999998754
No 337
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=22.21 E-value=1.2e+02 Score=26.71 Aligned_cols=38 Identities=18% Similarity=0.227 Sum_probs=30.2
Q ss_pred CCeEEEEc--CCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 14 GRRLILFP--LPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 14 ~~~il~~~--~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
++++++++ -|+-|-..-...||..|+++|.+|.++-.+
T Consensus 81 ~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D 120 (271)
T 3bfv_A 81 AVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGD 120 (271)
T ss_dssp CCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 34444443 368899999999999999999999998775
No 338
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=22.20 E-value=80 Score=26.70 Aligned_cols=37 Identities=11% Similarity=0.148 Sum_probs=26.4
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 13 KGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
.+..|+++ +|..|+..-...++..|.++|++|..+-.
T Consensus 11 ~~~~vvll-HG~~~~~~~~~~~~~~l~~~g~~v~~~D~ 47 (267)
T 3sty_A 11 VKKHFVLV-HAAFHGAWCWYKIVALMRSSGHNVTALDL 47 (267)
T ss_dssp CCCEEEEE-CCTTCCGGGGHHHHHHHHHTTCEEEEECC
T ss_pred CCCeEEEE-CCCCCCcchHHHHHHHHHhcCCeEEEecc
Confidence 34444444 46556666677899999999999987655
No 339
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=22.05 E-value=61 Score=30.05 Aligned_cols=39 Identities=18% Similarity=0.187 Sum_probs=27.9
Q ss_pred cccccCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 7 SHMQQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 7 ~~m~~~~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
.+|.. ++|||.|+..|..| .++|..|++.||+|++....
T Consensus 23 ~~m~~-~~mkI~VIGaG~mG-----~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 23 NAMEP-FKHPIAILGAGSWG-----TALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp ----C-CCSCEEEECCSHHH-----HHHHHHHHTTTCCEEEECSC
T ss_pred hcccc-cCCeEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 34442 35789999877665 46889999999999998763
No 340
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=22.04 E-value=2e+02 Score=22.75 Aligned_cols=38 Identities=3% Similarity=0.027 Sum_probs=28.5
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 13 KGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
+++||+++.+++.- ..-+....+.|...|++|.++++.
T Consensus 1 ~~~ki~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~ 38 (168)
T 3l18_A 1 ASMKVLFLSADGFE-DLELIYPLHRIKEEGHEVYVASFQ 38 (168)
T ss_dssp CCCEEEEECCTTBC-HHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEEEeCCCcc-HHHHHHHHHHHHHCCCEEEEEECC
Confidence 45789888877543 344556678888899999999885
No 341
>1r8j_A KAIA; circadian clock protein; 2.03A {Synechococcus elongatus pcc 7942} SCOP: a.186.1.1 c.23.1.5 PDB: 1m2e_A 1m2f_A
Probab=21.97 E-value=3.1e+02 Score=24.06 Aligned_cols=63 Identities=17% Similarity=0.203 Sum_probs=41.8
Q ss_pred hhhhhHHHHHHhhhc-eeecCC-------ccCHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHH
Q 012543 383 EQMVIARYVSDVWKV-GLHLER-------KLERGEVERAIRRVMVDAEGREMRNRAAILKEKLDLCTKQGSSSYQSLENL 454 (461)
Q Consensus 383 DQ~~na~~v~~~lG~-G~~l~~-------~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~l 454 (461)
-|..-+.+++++||. |+..++ .+++++=.+-++++-.+ ||. .+-..+......-+++|++
T Consensus 157 qQ~rL~~KLkERLGYLGVYYKR~p~~F~rnl~~~ErqeLl~~Lk~~-----YR~-------IlL~YF~~d~~~Nq~ID~F 224 (289)
T 1r8j_A 157 QQRDLAQRLQERLGYLGVYYKRDPDRFLRNLPAYESQKLHQAMQTS-----YRE-------IVLSYFSPNSNLNQSIDNF 224 (289)
T ss_dssp HHHHHHHHHHHHHEEEEEEECCCGGGSTTTSCHHHHHHHHHHHHHH-----HHH-------HHHHHTSTTCCHHHHHHHH
T ss_pred HHhhHHHHHHHHhcccceeeeeCHHHHHHhCCHHHHHHHHHHHHHH-----HHH-------HHHHHhCCchHHHHHHHHH
Confidence 456678888887875 777654 46777666666666544 554 4444555777777777777
Q ss_pred HHH
Q 012543 455 ISY 457 (461)
Q Consensus 455 ~~~ 457 (461)
|+.
T Consensus 225 VN~ 227 (289)
T 1r8j_A 225 VNM 227 (289)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 342
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=21.92 E-value=96 Score=24.25 Aligned_cols=33 Identities=18% Similarity=0.175 Sum_probs=20.9
Q ss_pred eEEEEcCCCccCHH--HHHHHHHHHHhCCCeEEEEe
Q 012543 16 RLILFPLPFQGHIN--PMLQLANILYSKGFSITIIH 49 (461)
Q Consensus 16 ~il~~~~~~~GHi~--p~l~La~~L~~rGh~V~~~~ 49 (461)
.|+++ +|..|... .+..+++.|.++|+.|...-
T Consensus 6 ~vv~~-HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d 40 (176)
T 2qjw_A 6 HCILA-HGFESGPDALKVTALAEVAERLGWTHERPD 40 (176)
T ss_dssp EEEEE-CCTTCCTTSHHHHHHHHHHHHTTCEEECCC
T ss_pred EEEEE-eCCCCCccHHHHHHHHHHHHHCCCEEEEeC
Confidence 34444 34434333 45689999999998776543
No 343
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=21.90 E-value=55 Score=29.97 Aligned_cols=37 Identities=5% Similarity=0.047 Sum_probs=26.7
Q ss_pred CCeEEEEcCCCccCHH----HHHHHHHHHHhCCCeEEEEeC
Q 012543 14 GRRLILFPLPFQGHIN----PMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~----p~l~La~~L~~rGh~V~~~~~ 50 (461)
++||+++..|..+-.. ...+++++|.+.||+|..+..
T Consensus 3 ~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~ 43 (343)
T 1e4e_A 3 RIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGI 43 (343)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEE
Confidence 5688888754332222 566789999999999998765
No 344
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=21.90 E-value=1.1e+02 Score=24.52 Aligned_cols=35 Identities=17% Similarity=0.012 Sum_probs=29.7
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 17 LILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 17 il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
.+++..+..--.++.+-+|..-++.|++|+++.+-
T Consensus 8 ~II~~sG~~dka~~a~ilA~~AaA~G~eV~iFfTf 42 (160)
T 3pnx_A 8 NLLLFSGDYDKALASLIIANAAREMEIEVTIFCAF 42 (160)
T ss_dssp EEEECCCCHHHHHHHHHHHHHHHHTTCEEEEEECG
T ss_pred EEEEecCCHHHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 34566678888999999999999999999998884
No 345
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=21.82 E-value=3.5e+02 Score=22.52 Aligned_cols=140 Identities=11% Similarity=-0.046 Sum_probs=74.8
Q ss_pred CCeEEEEEccccccCCHHHHHHHHHHHHhCCCceEEEECCCccCCchhcccC------chhHHHHhcCCCceeee--cCh
Q 012543 273 PKSVIYVSFGSIAAIDETKFLEVAWGLANSKVPFLWVVRPGLVRGAEWIELL------PRGFLEMLDGRGHIVKW--APQ 344 (461)
Q Consensus 273 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~l------p~~~~~~~~~~~~~~~~--vp~ 344 (461)
++++++.-.||.... +....+++.|.+.+.++-++.+.....- .... .+.+. ...++-...++ +++
T Consensus 7 ~k~I~lgiTGs~aa~--~k~~~ll~~L~~~g~eV~vv~T~~A~~~---i~~~~~~~~~~~~l~-~l~g~~v~~~~~~~~h 80 (201)
T 3lqk_A 7 GKHVGFGLTGSHCTY--HEVLPQMERLVELGAKVTPFVTHTVQTT---DTKFGESSEWINKIK-QITEEPIVDSMVKAEP 80 (201)
T ss_dssp TCEEEEECCSCGGGG--GGTHHHHHHHHHTTCEEEEECSSCSCCT---TCCTTCSCHHHHHHH-HHCCSCCBCSHHHHGG
T ss_pred CCEEEEEEEChHHHH--HHHHHHHHHHhhCCCEEEEEEChhHHHH---HHHhhchhHHHHHHH-HHhCCCeEeecCcccc
Confidence 466777777876653 1234455666666777655555432111 1111 01221 12222111111 122
Q ss_pred hhhhcCCCCCccccccCchHHH----------------HHhhcCCccccCcc----cchhhhhHHHHHHhhhceeecCC-
Q 012543 345 QEVLAHPATGAFWTHCGWNSTL----------------ESMCEGVPMICQPC----HGEQMVIARYVSDVWKVGLHLER- 403 (461)
Q Consensus 345 ~~lL~~~~~~~~I~HGG~gs~~----------------eal~~GvP~l~~P~----~~DQ~~na~~v~~~lG~G~~l~~- 403 (461)
-.+-..+|+ .+|.=|-.||+. .++..++|+|++|- ....+.|..++.+ +|+=+....
T Consensus 81 i~~s~~aD~-mvIaP~TanTlAkiA~GiaDnLlt~aa~~~Lk~~~plvl~Pamn~~m~~h~~Nm~~L~~-~G~~i~~P~~ 158 (201)
T 3lqk_A 81 FGPKTPLDC-MVIAPMTGNSTSKFANAMTDSPVLMGAKATLRNGKPVVVGISTNDALGLNGINIMRLMA-TKNIYFIPFG 158 (201)
T ss_dssp GTTTSCCSE-EEEEEECHHHHHHHHTTCCCSHHHHHHHHHHHTTCCEEEEEEETTTTTTTHHHHHHHHT-STTEEECCEE
T ss_pred cccccccCE-EEEccCCHHHHHHHHCcccCcHHHHHHHHHhhcCCCEEEEECCChhHHHhHHHHHHHHH-CCCEEECCCC
Confidence 222233443 455555555433 23557999999994 4566779999998 586544321
Q ss_pred -----------ccCHHHHHHHHHHHhcc
Q 012543 404 -----------KLERGEVERAIRRVMVD 420 (461)
Q Consensus 404 -----------~~~~~~l~~~i~~ll~~ 420 (461)
....+.|.+.|.+.|++
T Consensus 159 ~~~~~~~p~s~~a~~~~i~~tv~~al~~ 186 (201)
T 3lqk_A 159 QDNPQVKPNSLVARMEALPETIEAALRG 186 (201)
T ss_dssp ESCTTTCTTCEEECGGGHHHHHHHHHTT
T ss_pred ccccccCCCcccCCHHHHHHHHHHHHhc
Confidence 13457888888888876
No 346
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=21.70 E-value=2.4e+02 Score=22.02 Aligned_cols=37 Identities=11% Similarity=-0.015 Sum_probs=27.5
Q ss_pred CeEEEEcCCCcc---CHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 15 RRLILFPLPFQG---HINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 15 ~~il~~~~~~~G---Hi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
..++++++|+.| .-.-+..+++.|...+.++.+.+..
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~ 60 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDG 60 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCS
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECC
Confidence 456778888876 4455667888888778888887763
No 347
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=21.67 E-value=68 Score=28.41 Aligned_cols=31 Identities=26% Similarity=0.350 Sum_probs=24.4
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
|+|.|+..|..| ..+|+.|.++||+|+++..
T Consensus 2 ~~i~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 32 (287)
T 3pef_A 2 QKFGFIGLGIMG-----SAMAKNLVKAGCSVTIWNR 32 (287)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEeecHHH-----HHHHHHHHHCCCeEEEEcC
Confidence 588888766554 5678999999999998655
No 348
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=21.66 E-value=78 Score=28.06 Aligned_cols=33 Identities=12% Similarity=0.174 Sum_probs=23.2
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
++|+++ |+.|.+- ..|+++|.++||+|+.++-.
T Consensus 3 ~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 35 (307)
T 2gas_A 3 NKILIL--GPTGAIG--RHIVWASIKAGNPTYALVRK 35 (307)
T ss_dssp CCEEEE--STTSTTH--HHHHHHHHHHTCCEEEEECC
T ss_pred cEEEEE--CCCchHH--HHHHHHHHhCCCcEEEEECC
Confidence 355554 4555554 45788999999999987763
No 349
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=21.63 E-value=1.2e+02 Score=26.34 Aligned_cols=33 Identities=24% Similarity=0.246 Sum_probs=24.5
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
.|.++++.++.| + -.++|++|.++|++|.++..
T Consensus 29 ~k~vlITGas~g-I--G~~la~~l~~~G~~V~~~~r 61 (271)
T 4iin_A 29 GKNVLITGASKG-I--GAEIAKTLASMGLKVWINYR 61 (271)
T ss_dssp CCEEEETTCSSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcH-H--HHHHHHHHHHCCCEEEEEeC
Confidence 356777755543 3 35889999999999998776
No 350
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=21.51 E-value=93 Score=27.02 Aligned_cols=34 Identities=6% Similarity=0.165 Sum_probs=24.3
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
.|++++|.++ |-+- .+++++|.++|++|+++...
T Consensus 28 ~k~vlVTGas-~gIG--~aia~~l~~~G~~V~~~~r~ 61 (260)
T 3un1_A 28 QKVVVITGAS-QGIG--AGLVRAYRDRNYRVVATSRS 61 (260)
T ss_dssp CCEEEESSCS-SHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCC-CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 3566677444 3333 47899999999999988763
No 351
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=21.34 E-value=51 Score=29.70 Aligned_cols=33 Identities=18% Similarity=0.211 Sum_probs=25.8
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 13 KGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
+.++|.|+..|..| .++|+.|.++||+|+++..
T Consensus 8 ~~~~IgiIG~G~mG-----~~~A~~l~~~G~~V~~~dr 40 (306)
T 3l6d_A 8 FEFDVSVIGLGAMG-----TIMAQVLLKQGKRVAIWNR 40 (306)
T ss_dssp CSCSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 35689999776555 4689999999999988644
No 352
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=21.33 E-value=34 Score=30.79 Aligned_cols=33 Identities=18% Similarity=0.287 Sum_probs=25.6
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhC-----C-CeEEEEeC
Q 012543 13 KGRRLILFPLPFQGHINPMLQLANILYSK-----G-FSITIIHT 50 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~p~l~La~~L~~r-----G-h~V~~~~~ 50 (461)
++|+|+|+..|..|. .+|..|.+. | |+|+++..
T Consensus 7 ~~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CCEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEc
Confidence 347899998777773 567888888 9 99999765
No 353
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=21.27 E-value=92 Score=26.81 Aligned_cols=32 Identities=3% Similarity=0.017 Sum_probs=23.1
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 16 RLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 16 ~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
+.++++ |+.|-+ -.+++++|.++|++|+++..
T Consensus 8 k~vlIT-Gasggi--G~~~a~~l~~~G~~V~~~~r 39 (261)
T 1gee_A 8 KVVVIT-GSSTGL--GKSMAIRFATEKAKVVVNYR 39 (261)
T ss_dssp CEEEET-TCSSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEe-CCCChH--HHHHHHHHHHCCCEEEEEcC
Confidence 456666 444444 36889999999999998765
No 354
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=21.24 E-value=1.2e+02 Score=29.01 Aligned_cols=39 Identities=13% Similarity=0.328 Sum_probs=34.0
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKF 52 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~~ 52 (461)
+..|+++..++.|-..-+..||..|+++|++|.++..+.
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~ 138 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDT 138 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCC
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 456777777899999999999999999999999998753
No 355
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=21.20 E-value=1.1e+02 Score=23.29 Aligned_cols=32 Identities=25% Similarity=0.217 Sum_probs=20.9
Q ss_pred CCccEEEeCCCch--hhHHHHHHc---------CCCeEEEecc
Q 012543 114 EPIACLITDASWF--FTHDVAESL---------KLPRIVLRSL 145 (461)
Q Consensus 114 ~~pDlvi~D~~~~--~a~~~A~~l---------giP~v~~~~~ 145 (461)
.+||+||.|...+ .+..+++.+ .+|.++++..
T Consensus 57 ~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 57 EDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 6799999996542 244444433 3788887765
No 356
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=21.17 E-value=1.2e+02 Score=26.65 Aligned_cols=34 Identities=9% Similarity=0.070 Sum_probs=26.8
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
+-|++++|.++.| + -.++|+.|+++|++|.+..-
T Consensus 10 ~GK~alVTGas~G-I--G~aia~~la~~Ga~V~~~~r 43 (261)
T 4h15_A 10 RGKRALITAGTKG-A--GAATVSLFLELGAQVLTTAR 43 (261)
T ss_dssp TTCEEEESCCSSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeccCcH-H--HHHHHHHHHHcCCEEEEEEC
Confidence 4588888876665 2 36889999999999998765
No 357
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=21.10 E-value=82 Score=26.12 Aligned_cols=47 Identities=9% Similarity=0.135 Sum_probs=30.6
Q ss_pred hhHHHHHHhhhceeecCCccCHHHHHHHHHHHhcc-hh---HHHHHHHHHHHHHHHH
Q 012543 386 VIARYVSDVWKVGLHLERKLERGEVERAIRRVMVD-AE---GREMRNRAAILKEKLD 438 (461)
Q Consensus 386 ~na~~v~~~lG~G~~l~~~~~~~~l~~~i~~ll~~-~~---~~~~~~~a~~l~~~~~ 438 (461)
+.+..-+. .|+|+.+ |+|+|.++|.++++. .+ ...|+ +.-.+-..++
T Consensus 103 d~~~Fe~~-cGVGV~V----T~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr 153 (187)
T 3tl4_X 103 TKMGMNEN-SGVGIEI----TEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVK 153 (187)
T ss_dssp CHHHHHHT-TTTTCCC----CHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHH
T ss_pred CHHHHHHH-CCCCeEe----CHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHh
Confidence 33444444 6888765 789999999999964 21 13455 6666666665
No 358
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=21.10 E-value=51 Score=28.94 Aligned_cols=32 Identities=22% Similarity=0.282 Sum_probs=24.4
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
|+|+++. + |.+-. .|+++|.++||+|+.++..
T Consensus 6 ~~ilVtG--a-G~iG~--~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 6 GTLLSFG--H-GYTAR--VLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp CEEEEET--C-CHHHH--HHHHHHGGGTCEEEEEESC
T ss_pred CcEEEEC--C-cHHHH--HHHHHHHHCCCEEEEEEcC
Confidence 5777764 5 65554 6789999999999998764
No 359
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=21.04 E-value=57 Score=29.02 Aligned_cols=33 Identities=12% Similarity=-0.061 Sum_probs=26.8
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
+.+|+++-.|..| +..|..|+++|++|+++-..
T Consensus 15 ~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAA-----YGAALYSARYMLKTLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHH-----HHHHHHHHHTTCCEEEEESS
T ss_pred ccCEEEECccHHH-----HHHHHHHHHCCCcEEEEecc
Confidence 3589998877666 67888999999999998763
No 360
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=21.03 E-value=1.3e+02 Score=25.94 Aligned_cols=32 Identities=16% Similarity=0.074 Sum_probs=22.9
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 16 RLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 16 ~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
+.++++.++ |-+- .++++.|.++|++|+++..
T Consensus 8 k~vlITGas-ggiG--~~la~~l~~~G~~V~~~~r 39 (264)
T 2pd6_A 8 ALALVTGAG-SGIG--RAVSVRLAGEGATVAACDL 39 (264)
T ss_dssp CEEEEETTT-SHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-ChHH--HHHHHHHHHCCCEEEEEeC
Confidence 556666443 3333 5789999999999998765
No 361
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=20.96 E-value=75 Score=28.44 Aligned_cols=33 Identities=15% Similarity=0.142 Sum_probs=23.7
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
++|+++ |+.|.+- ..|+++|.++||+|+.++-.
T Consensus 5 ~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 37 (321)
T 3c1o_A 5 EKIIIY--GGTGYIG--KFMVRASLSFSHPTFIYARP 37 (321)
T ss_dssp CCEEEE--TTTSTTH--HHHHHHHHHTTCCEEEEECC
T ss_pred cEEEEE--cCCchhH--HHHHHHHHhCCCcEEEEECC
Confidence 366554 4555554 36789999999999998764
No 362
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=20.87 E-value=55 Score=29.71 Aligned_cols=31 Identities=19% Similarity=0.128 Sum_probs=24.1
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
|||.|+..|..| ..+|..|.++||+|+++..
T Consensus 1 m~I~iiG~G~mG-----~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMG-----SALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEEc
Confidence 478888766555 4568889999999999765
No 363
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=20.87 E-value=44 Score=32.39 Aligned_cols=30 Identities=23% Similarity=0.357 Sum_probs=23.8
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 16 RLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 16 ~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
+|+++-.|-.| |.-|..|+++||+|+++=.
T Consensus 3 ~VvVIGaG~~G-----L~aA~~La~~G~~V~VlEa 32 (501)
T 4dgk_A 3 PTTVIGAGFGG-----LALAIRLQAAGIPVLLLEQ 32 (501)
T ss_dssp CEEEECCHHHH-----HHHHHHHHHTTCCEEEECC
T ss_pred CEEEECCcHHH-----HHHHHHHHHCCCcEEEEcc
Confidence 88888766444 6678889999999999754
No 364
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=20.71 E-value=1e+02 Score=26.60 Aligned_cols=32 Identities=19% Similarity=0.141 Sum_probs=22.7
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 16 RLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 16 ~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
+.++++. +.|-+- .++++.|.++|++|+++..
T Consensus 13 k~vlVTG-as~gIG--~~ia~~l~~~G~~V~~~~r 44 (263)
T 3ak4_A 13 RKAIVTG-GSKGIG--AAIARALDKAGATVAIADL 44 (263)
T ss_dssp CEEEEET-TTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeC-CCChHH--HHHHHHHHHCCCEEEEEeC
Confidence 4566663 344343 5789999999999998765
No 365
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=20.69 E-value=91 Score=28.59 Aligned_cols=52 Identities=10% Similarity=0.243 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCCCC-CCCCCCCCceEEEc
Q 012543 13 KGRRLILFPLPFQGHINPMLQLANILYSK-GFSITIIHTKFNS-PNPSNYPHFTFCSI 68 (461)
Q Consensus 13 ~~~~il~~~~~~~GHi~p~l~La~~L~~r-Gh~V~~~~~~~~~-~~~~~~~~~~~~~~ 68 (461)
++++|+++ |+.|.+- ..|+++|.++ ||+|+.+...... .......+++++..
T Consensus 23 ~~~~vlVt--GatG~iG--~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~ 76 (372)
T 3slg_A 23 KAKKVLIL--GVNGFIG--HHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEG 76 (372)
T ss_dssp CCCEEEEE--SCSSHHH--HHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEEC
T ss_pred CCCEEEEE--CCCChHH--HHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeC
Confidence 34576655 4555554 4678899988 9999998864221 11111246666653
No 366
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=20.62 E-value=1.4e+02 Score=25.71 Aligned_cols=32 Identities=6% Similarity=0.035 Sum_probs=22.6
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 16 RLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 16 ~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
+.++++.+ .|-+ -.++++.|.++||+|+++..
T Consensus 8 k~vlVTGa-s~gI--G~~ia~~l~~~G~~V~~~~r 39 (260)
T 1nff_A 8 KVALVSGG-ARGM--GASHVRAMVAEGAKVVFGDI 39 (260)
T ss_dssp CEEEEETT-TSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCC-CCHH--HHHHHHHHHHCCCEEEEEeC
Confidence 55666643 3433 35789999999999998765
No 367
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=20.57 E-value=1.2e+02 Score=26.55 Aligned_cols=34 Identities=12% Similarity=0.062 Sum_probs=25.2
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
+.|.++++.++.| + -.++|+.|.++|++|.++..
T Consensus 29 ~~k~vlVTGas~G-I--G~aia~~l~~~G~~Vi~~~r 62 (281)
T 3ppi_A 29 EGASAIVSGGAGG-L--GEATVRRLHADGLGVVIADL 62 (281)
T ss_dssp TTEEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCh-H--HHHHHHHHHHCCCEEEEEeC
Confidence 3467777755554 3 35789999999999988765
No 368
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=20.46 E-value=74 Score=29.52 Aligned_cols=32 Identities=13% Similarity=0.151 Sum_probs=25.6
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
+|+|.|+..|..| ..+|+.|.++||+|+++..
T Consensus 22 ~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr 53 (358)
T 4e21_A 22 SMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDL 53 (358)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 4789999766554 4788999999999998755
No 369
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=20.43 E-value=1.3e+02 Score=26.15 Aligned_cols=36 Identities=17% Similarity=0.146 Sum_probs=29.2
Q ss_pred eEEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 16 RLILFP-LPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 16 ~il~~~-~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
.|+++. -|+-|=..-...||..|+++|++|.++-.+
T Consensus 20 vI~v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D 56 (262)
T 2ph1_A 20 RIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDAD 56 (262)
T ss_dssp EEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 444443 368899999999999999999999998765
No 370
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=20.41 E-value=4.4e+02 Score=23.17 Aligned_cols=30 Identities=23% Similarity=0.182 Sum_probs=19.9
Q ss_pred CCccEEEeCCCchh----hHHHHHHcCCCeEEEe
Q 012543 114 EPIACLITDASWFF----THDVAESLKLPRIVLR 143 (461)
Q Consensus 114 ~~pDlvi~D~~~~~----a~~~A~~lgiP~v~~~ 143 (461)
.++|.||....... ....+...|+|+|.+.
T Consensus 61 ~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~ 94 (325)
T 2x7x_A 61 EGVDLLIISANEAAPMTPIVEEAYQKGIPVILVD 94 (325)
T ss_dssp TTCSEEEECCSSHHHHHHHHHHHHHTTCCEEEES
T ss_pred cCCCEEEEeCCCHHHHHHHHHHHHHCCCeEEEeC
Confidence 67999988765432 1223456799999874
No 371
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=20.40 E-value=69 Score=27.48 Aligned_cols=37 Identities=19% Similarity=0.153 Sum_probs=29.4
Q ss_pred CCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 14 GRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
+..++++.+|..|+..-+..+++.|.++|+.|..+-.
T Consensus 48 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~ 84 (258)
T 2fx5_A 48 RHPVILWGNGTGAGPSTYAGLLSHWASHGFVVAAAET 84 (258)
T ss_dssp CEEEEEEECCTTCCGGGGHHHHHHHHHHTCEEEEECC
T ss_pred CceEEEEECCCCCCchhHHHHHHHHHhCCeEEEEecC
Confidence 4456677777777888888999999999999887654
No 372
>1ny5_A Transcriptional regulator (NTRC family); AAA+ ATPase, sigma54 activator, bacterial transcription, DIM transcription; HET: ADP; 2.40A {Aquifex aeolicus} SCOP: c.23.1.1 c.37.1.20 PDB: 1ny6_A* 3m0e_A* 1zy2_A*
Probab=20.39 E-value=1.6e+02 Score=27.49 Aligned_cols=84 Identities=17% Similarity=0.178 Sum_probs=45.9
Q ss_pred cCCccccCcccchhhhhHHHHHHhhhceeecCCccCHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhhcCCChHHH
Q 012543 371 EGVPMICQPCHGEQMVIARYVSDVWKVGLHLERKLERGEVERAIRRVMVDAEGREMRNRAAILKEKLDLCTKQGSSSYQS 450 (461)
Q Consensus 371 ~GvP~l~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~ 450 (461)
..+|+|++.-..+. ..+...-+ .|+--.+.+.++.++|...|++++.. ...++....+..........--+....
T Consensus 71 ~~~pvIvlT~~~~~-~~~~~a~~-~Ga~dyl~KP~~~~~L~~~i~~~l~~---~~l~~~~~~l~~~~~~~~~~~ig~s~~ 145 (387)
T 1ny5_A 71 PETEVIVITGHGTI-KTAVEAMK-MGAYDFLTKPCMLEEIELTINKAIEH---RKLRKENELLRREKDLKEEEYVFESPK 145 (387)
T ss_dssp TTSEEEEEEETTCH-HHHHHHHT-TTCCEEEEESCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHTTCCCCCCCSHH
T ss_pred CCCcEEEEeCCCCH-HHHHHHHh-cCceEEecCCCCHHHHHHHHHHHHHH---HHHHHHHHHhhhhhhhcchhhhhccHH
Confidence 46788887655443 34444444 36655555568999999999999876 444444344433322101111122235
Q ss_pred HHHHHHHHH
Q 012543 451 LENLISYIL 459 (461)
Q Consensus 451 ~~~l~~~l~ 459 (461)
+.++.+.++
T Consensus 146 m~~l~~~i~ 154 (387)
T 1ny5_A 146 MKEILEKIK 154 (387)
T ss_dssp HHHHHHHHH
T ss_pred hhHHHHHHH
Confidence 566555544
No 373
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=20.30 E-value=89 Score=26.94 Aligned_cols=33 Identities=9% Similarity=-0.072 Sum_probs=22.5
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
||.++++.++ |-+- .++++.|.++|++|+++..
T Consensus 1 Mk~vlVTGas-~gIG--~~ia~~l~~~G~~V~~~~r 33 (254)
T 1zmt_A 1 MSTAIVTNVK-HFGG--MGSALRLSEAGHTVACHDE 33 (254)
T ss_dssp -CEEEESSTT-STTH--HHHHHHHHHTTCEEEECCG
T ss_pred CeEEEEeCCC-chHH--HHHHHHHHHCCCEEEEEeC
Confidence 3566777544 3333 4789999999999987543
No 374
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=20.29 E-value=1.2e+02 Score=27.08 Aligned_cols=38 Identities=16% Similarity=0.192 Sum_probs=30.3
Q ss_pred CeEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012543 15 RRLILFPL-PFQGHINPMLQLANILYSKGFSITIIHTKF 52 (461)
Q Consensus 15 ~~il~~~~-~~~GHi~p~l~La~~L~~rGh~V~~~~~~~ 52 (461)
+.|+|+.. |+-|-..-...||..|+++|.+|.++-.+.
T Consensus 105 kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 143 (299)
T 3cio_A 105 NILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADL 143 (299)
T ss_dssp CEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred eEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 34444433 688999999999999999999999987653
No 375
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=20.28 E-value=1.1e+02 Score=31.05 Aligned_cols=39 Identities=13% Similarity=0.149 Sum_probs=31.1
Q ss_pred CCccEEEeCCCc-hhhHHHHHHcCCCeEEEecccHHHHHH
Q 012543 114 EPIACLITDASW-FFTHDVAESLKLPRIVLRSLSVSSSLV 152 (461)
Q Consensus 114 ~~pDlvi~D~~~-~~a~~~A~~lgiP~v~~~~~~~~~~~~ 152 (461)
.+|++|++|..- +.....|+.+++|.+.+...-++..+.
T Consensus 355 ~~p~~i~~D~HP~y~st~~a~~~~~~~~~vQHHhAH~~a~ 394 (657)
T 3ttc_A 355 FTPQYVVHDAHPGYVSCQWASEMNLPTQTVLHHHAHAAAC 394 (657)
T ss_dssp CCCSEEEEESCTTCHHHHHHTTSCSCEEEECHHHHHHHHH
T ss_pred CCCCEEEEcCCCCchHHHHHHHcCCCeEEeeHHHHHHHHH
Confidence 789999999765 445668888999999998887766544
No 376
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=20.16 E-value=1.3e+02 Score=24.62 Aligned_cols=37 Identities=16% Similarity=0.227 Sum_probs=26.5
Q ss_pred CCeEEEEcCCCccCHHHHH-HHHHHHHhCCCeEEEEeC
Q 012543 14 GRRLILFPLPFQGHINPML-QLANILYSKGFSITIIHT 50 (461)
Q Consensus 14 ~~~il~~~~~~~GHi~p~l-~La~~L~~rGh~V~~~~~ 50 (461)
.+||+++-....|+..-+. .+++.|.+.|++|.++.-
T Consensus 5 M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l 42 (200)
T 2a5l_A 5 SPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTV 42 (200)
T ss_dssp CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBC
T ss_pred cceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 3478776666678776655 456777778999988765
No 377
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=20.15 E-value=1.4e+02 Score=23.75 Aligned_cols=36 Identities=11% Similarity=0.164 Sum_probs=26.3
Q ss_pred CeEEEEcCCCccCHHHHH-HHHHHHHhCCCeEEEEeC
Q 012543 15 RRLILFPLPFQGHINPML-QLANILYSKGFSITIIHT 50 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l-~La~~L~~rGh~V~~~~~ 50 (461)
|+|+++-+..+|+..-+. .|++.|.+.|++|.++..
T Consensus 1 Mkv~IvY~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~ 37 (161)
T 3hly_A 1 MSVLIGYLSDYGYSDRLSQAIGRGLVKTGVAVEMVDL 37 (161)
T ss_dssp -CEEEEECTTSTTHHHHHHHHHHHHHHTTCCEEEEET
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEEC
Confidence 456666566678887766 468888889999887655
No 378
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=20.15 E-value=74 Score=28.82 Aligned_cols=31 Identities=6% Similarity=0.019 Sum_probs=26.0
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEeC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKG-FSITIIHT 50 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rG-h~V~~~~~ 50 (461)
++|.|+..|..| .++|+.|.+.| |+|+++..
T Consensus 25 m~IgvIG~G~mG-----~~lA~~L~~~G~~~V~~~dr 56 (317)
T 4ezb_A 25 TTIAFIGFGEAA-----QSIAGGLGGRNAARLAAYDL 56 (317)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHTTTCSEEEEECG
T ss_pred CeEEEECccHHH-----HHHHHHHHHcCCCeEEEEeC
Confidence 589999877666 78899999999 99998655
No 379
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=20.15 E-value=87 Score=27.09 Aligned_cols=36 Identities=17% Similarity=0.155 Sum_probs=29.4
Q ss_pred eEEE-EcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 16 RLIL-FPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 16 ~il~-~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
.|.+ .+-|+-|-..-...||..|+++|++|.++-.+
T Consensus 4 ~I~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D 40 (263)
T 1hyq_A 4 TITVASGKGGTGKTTITANLGVALAQLGHDVTIVDAD 40 (263)
T ss_dssp EEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHhCCCcEEEEECC
Confidence 3444 34478899999999999999999999998764
No 380
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=20.05 E-value=1.2e+02 Score=26.11 Aligned_cols=33 Identities=12% Similarity=0.146 Sum_probs=24.8
Q ss_pred CeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012543 15 RRLILFPLPFQGHINPMLQLANILYSKGFSITIIHT 50 (461)
Q Consensus 15 ~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~ 50 (461)
.|+++++.++.| --.++|+.|.++|++|+++..
T Consensus 6 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 38 (257)
T 3imf_A 6 EKVVIITGGSSG---MGKGMATRFAKEGARVVITGR 38 (257)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 367777755543 336789999999999998765
No 381
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=20.03 E-value=78 Score=29.50 Aligned_cols=40 Identities=20% Similarity=0.360 Sum_probs=28.4
Q ss_pred cccccCCCCeEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012543 7 SHMQQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTK 51 (461)
Q Consensus 7 ~~m~~~~~~~il~~~~~~~GHi~p~l~La~~L~~rGh~V~~~~~~ 51 (461)
+.|...+..+|+++..|-.| +.+|..|+++|++|+++-..
T Consensus 19 ~~M~~~~~~dV~IVGaG~aG-----l~~A~~L~~~G~~v~v~E~~ 58 (398)
T 2xdo_A 19 SHMNLLSDKNVAIIGGGPVG-----LTMAKLLQQNGIDVSVYERD 58 (398)
T ss_dssp ----CCTTCEEEEECCSHHH-----HHHHHHHHTTTCEEEEEECS
T ss_pred ccccccCCCCEEEECCCHHH-----HHHHHHHHHCCCCEEEEeCC
Confidence 34554456789998877555 67888999999999998764
Done!