Query 012545
Match_columns 461
No_of_seqs 294 out of 2976
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 11:31:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012545.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012545hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lxd_A FAD-dependent pyridine 100.0 2E-55 6.8E-60 441.1 49.3 401 4-459 8-412 (415)
2 3ef6_A Toluene 1,2-dioxygenase 100.0 4.8E-55 1.6E-59 437.2 45.1 395 6-459 3-400 (410)
3 3fg2_P Putative rubredoxin red 100.0 1.9E-54 6.4E-59 432.4 47.7 397 5-458 1-400 (404)
4 1q1r_A Putidaredoxin reductase 100.0 1.1E-52 3.9E-57 422.4 45.4 400 4-458 3-409 (431)
5 4eqs_A Coenzyme A disulfide re 100.0 2.8E-53 9.4E-58 427.2 39.3 401 6-459 1-424 (437)
6 2gqw_A Ferredoxin reductase; f 100.0 1.3E-52 4.3E-57 419.3 42.6 392 4-458 6-400 (408)
7 3klj_A NAD(FAD)-dependent dehy 100.0 1.9E-52 6.4E-57 413.9 34.6 363 4-447 8-375 (385)
8 3oc4_A Oxidoreductase, pyridin 100.0 5.7E-51 2E-55 413.0 37.8 405 6-460 3-427 (452)
9 2bc0_A NADH oxidase; flavoprot 100.0 3.1E-50 1E-54 411.5 39.5 420 5-460 35-477 (490)
10 3iwa_A FAD-dependent pyridine 100.0 1.6E-50 5.5E-55 412.1 36.6 413 5-459 3-445 (472)
11 3kd9_A Coenzyme A disulfide re 100.0 2.9E-50 9.8E-55 407.6 36.8 405 4-458 2-427 (449)
12 2cdu_A NADPH oxidase; flavoenz 100.0 1.4E-50 4.8E-55 410.2 34.3 406 6-460 1-432 (452)
13 3ntd_A FAD-dependent pyridine 100.0 3E-49 1E-53 411.9 39.2 398 6-451 2-443 (565)
14 1nhp_A NADH peroxidase; oxidor 100.0 4.9E-49 1.7E-53 398.4 35.4 404 6-460 1-431 (447)
15 3ics_A Coenzyme A-disulfide re 100.0 2.5E-48 8.6E-53 406.3 41.4 400 5-452 36-460 (588)
16 3cgb_A Pyridine nucleotide-dis 100.0 5.2E-48 1.8E-52 393.9 40.6 404 5-460 36-468 (480)
17 2v3a_A Rubredoxin reductase; a 100.0 6.6E-48 2.3E-52 382.5 37.1 370 2-435 1-376 (384)
18 1xhc_A NADH oxidase /nitrite r 100.0 5.7E-48 2E-52 379.9 33.3 353 5-438 8-362 (367)
19 1m6i_A Programmed cell death p 100.0 5.5E-48 1.9E-52 394.5 34.2 409 3-450 9-484 (493)
20 2hqm_A GR, grase, glutathione 100.0 1.2E-47 4.2E-52 391.1 26.3 400 4-460 10-466 (479)
21 1mo9_A ORF3; nucleotide bindin 100.0 1.3E-47 4.6E-52 394.6 24.3 399 3-459 41-508 (523)
22 1ges_A Glutathione reductase; 100.0 5.9E-46 2E-50 375.8 34.8 396 3-460 2-445 (450)
23 3dk9_A Grase, GR, glutathione 100.0 1.1E-46 3.7E-51 384.5 28.5 398 4-460 19-473 (478)
24 4dna_A Probable glutathione re 100.0 7.2E-47 2.5E-51 384.1 26.3 397 1-460 1-445 (463)
25 3urh_A Dihydrolipoyl dehydroge 100.0 1.1E-46 3.9E-51 385.4 25.3 398 4-459 24-475 (491)
26 1zmd_A Dihydrolipoyl dehydroge 100.0 1.3E-45 4.6E-50 376.0 33.0 397 5-459 6-457 (474)
27 2wpf_A Trypanothione reductase 100.0 1E-46 3.5E-51 385.3 24.7 397 2-460 4-470 (495)
28 2r9z_A Glutathione amide reduc 100.0 3E-45 1E-49 371.8 35.2 396 2-460 1-443 (463)
29 1ojt_A Surface protein; redox- 100.0 5.6E-47 1.9E-51 386.7 22.1 397 2-459 3-461 (482)
30 4b1b_A TRXR, thioredoxin reduc 100.0 2.8E-47 9.6E-52 390.0 19.9 395 5-460 42-516 (542)
31 1zk7_A HGII, reductase, mercur 100.0 3.9E-46 1.3E-50 379.2 28.2 395 2-458 1-445 (467)
32 2qae_A Lipoamide, dihydrolipoy 100.0 1.8E-45 6.3E-50 374.3 32.3 395 5-459 2-452 (468)
33 1xdi_A RV3303C-LPDA; reductase 100.0 6.1E-46 2.1E-50 380.6 28.7 396 5-459 2-455 (499)
34 3l8k_A Dihydrolipoyl dehydroge 100.0 3.5E-46 1.2E-50 379.2 26.7 398 3-459 2-448 (466)
35 3o0h_A Glutathione reductase; 100.0 2.1E-45 7.3E-50 375.2 31.9 394 4-460 25-465 (484)
36 1fec_A Trypanothione reductase 100.0 8.4E-46 2.9E-50 378.3 28.8 395 4-460 2-466 (490)
37 3lad_A Dihydrolipoamide dehydr 100.0 8.2E-46 2.8E-50 377.8 28.6 396 4-459 2-455 (476)
38 1v59_A Dihydrolipoamide dehydr 100.0 9.1E-46 3.1E-50 377.7 27.7 400 2-459 2-462 (478)
39 2a8x_A Dihydrolipoyl dehydroge 100.0 1.8E-45 6.2E-50 374.0 28.9 396 5-459 3-448 (464)
40 3dgh_A TRXR-1, thioredoxin red 100.0 9.9E-46 3.4E-50 377.7 26.5 398 4-460 8-470 (483)
41 1onf_A GR, grase, glutathione 100.0 6.6E-45 2.3E-49 372.7 32.4 402 5-459 2-490 (500)
42 1dxl_A Dihydrolipoamide dehydr 100.0 3E-45 1E-49 373.1 29.6 397 3-459 4-454 (470)
43 2eq6_A Pyruvate dehydrogenase 100.0 9.8E-45 3.3E-49 368.2 32.0 391 5-459 6-445 (464)
44 1ebd_A E3BD, dihydrolipoamide 100.0 1E-44 3.6E-49 367.5 32.2 394 5-459 3-445 (455)
45 3qfa_A Thioredoxin reductase 1 100.0 4.8E-45 1.7E-49 375.1 28.0 399 4-460 31-498 (519)
46 3dgz_A Thioredoxin reductase 2 100.0 1E-44 3.4E-49 370.6 28.2 397 4-459 5-469 (488)
47 3ic9_A Dihydrolipoamide dehydr 100.0 2.6E-45 8.8E-50 374.9 21.5 398 1-459 4-457 (492)
48 2yqu_A 2-oxoglutarate dehydrog 100.0 3E-43 1E-47 356.8 31.1 392 5-459 1-439 (455)
49 1lvl_A Dihydrolipoamide dehydr 100.0 2.5E-43 8.4E-48 357.3 26.6 386 5-459 5-442 (458)
50 2x8g_A Thioredoxin glutathione 100.0 4.3E-42 1.5E-46 359.7 30.9 396 4-460 106-577 (598)
51 4gcm_A TRXR, thioredoxin reduc 100.0 1.7E-39 5.6E-44 313.1 26.4 299 1-360 2-305 (312)
52 4g6h_A Rotenone-insensitive NA 100.0 5.7E-40 1.9E-44 334.9 23.7 298 4-359 41-399 (502)
53 2zbw_A Thioredoxin reductase; 100.0 1.3E-38 4.6E-43 309.7 25.6 305 1-362 1-318 (335)
54 4a5l_A Thioredoxin reductase; 100.0 5.4E-39 1.9E-43 309.6 19.7 301 2-360 1-311 (314)
55 1trb_A Thioredoxin reductase; 100.0 2.1E-38 7.2E-43 306.2 22.9 302 1-362 1-315 (320)
56 3vrd_B FCCB subunit, flavocyto 100.0 2.9E-38 1E-42 315.2 20.8 318 5-373 2-336 (401)
57 2q7v_A Thioredoxin reductase; 100.0 3.3E-37 1.1E-41 298.7 25.1 294 4-361 7-312 (325)
58 1fl2_A Alkyl hydroperoxide red 100.0 2.2E-37 7.6E-42 297.8 23.6 292 5-360 1-304 (310)
59 3cty_A Thioredoxin reductase; 100.0 3.6E-37 1.2E-41 297.7 24.6 295 2-361 13-316 (319)
60 3ab1_A Ferredoxin--NADP reduct 100.0 3.2E-37 1.1E-41 303.1 24.1 305 2-362 11-329 (360)
61 3itj_A Thioredoxin reductase 1 100.0 9.2E-38 3.1E-42 303.8 19.1 301 4-361 21-335 (338)
62 2q0l_A TRXR, thioredoxin reduc 100.0 4.4E-37 1.5E-41 295.8 22.7 291 6-360 2-308 (311)
63 3r9u_A Thioredoxin reductase; 100.0 6E-37 2.1E-41 295.1 23.3 292 4-360 3-311 (315)
64 3lzw_A Ferredoxin--NADP reduct 100.0 1.8E-37 6.3E-42 300.9 19.1 297 5-362 7-316 (332)
65 3f8d_A Thioredoxin reductase ( 100.0 1.1E-36 3.9E-41 294.1 24.2 293 5-360 15-316 (323)
66 3hyw_A Sulfide-quinone reducta 100.0 5.4E-37 1.8E-41 308.3 20.8 310 5-364 2-336 (430)
67 3sx6_A Sulfide-quinone reducta 100.0 3.3E-36 1.1E-40 303.4 25.9 318 3-367 2-350 (437)
68 3h8l_A NADH oxidase; membrane 100.0 4.9E-36 1.7E-40 299.8 26.5 291 6-360 2-335 (409)
69 4fk1_A Putative thioredoxin re 100.0 5.3E-37 1.8E-41 294.4 18.3 286 3-360 4-299 (304)
70 1vdc_A NTR, NADPH dependent th 100.0 1.6E-36 5.4E-41 294.8 19.5 306 3-360 6-322 (333)
71 3fbs_A Oxidoreductase; structu 100.0 1.4E-36 4.8E-41 290.0 18.1 282 5-360 2-291 (297)
72 2a87_A TRXR, TR, thioredoxin r 100.0 4.3E-36 1.5E-40 292.2 21.0 295 3-361 12-316 (335)
73 1hyu_A AHPF, alkyl hydroperoxi 100.0 1.9E-35 6.4E-40 303.7 25.5 293 4-360 211-515 (521)
74 4a9w_A Monooxygenase; baeyer-v 100.0 3.2E-35 1.1E-39 287.9 18.5 302 5-362 3-353 (357)
75 3h28_A Sulfide-quinone reducta 100.0 3.4E-34 1.2E-38 288.1 20.2 307 5-364 2-336 (430)
76 3d1c_A Flavin-containing putat 100.0 9.9E-34 3.4E-38 279.0 22.6 303 4-360 3-338 (369)
77 2vdc_G Glutamate synthase [NAD 100.0 4.4E-33 1.5E-37 280.6 17.5 288 4-362 121-445 (456)
78 1gte_A Dihydropyrimidine dehyd 100.0 5.4E-32 1.8E-36 297.7 21.4 316 5-387 187-539 (1025)
79 1cjc_A Protein (adrenodoxin re 100.0 1.9E-32 6.4E-37 276.6 13.0 294 4-360 5-394 (460)
80 2gag_A Heterotetrameric sarcos 100.0 6.8E-32 2.3E-36 294.9 16.9 284 5-360 128-443 (965)
81 2xve_A Flavin-containing monoo 100.0 8.7E-31 3E-35 265.3 22.3 288 5-360 2-340 (464)
82 1lqt_A FPRA; NADP+ derivative, 100.0 3.5E-32 1.2E-36 274.3 10.4 290 4-360 2-386 (456)
83 3s5w_A L-ornithine 5-monooxyge 100.0 9.1E-31 3.1E-35 265.9 16.6 312 5-358 30-446 (463)
84 2gv8_A Monooxygenase; FMO, FAD 100.0 2.5E-30 8.7E-35 261.2 16.8 293 3-360 4-361 (447)
85 1y56_A Hypothetical protein PH 100.0 1.7E-30 5.9E-35 265.1 14.6 257 4-360 107-376 (493)
86 3k30_A Histamine dehydrogenase 100.0 2.4E-31 8.3E-36 282.1 8.5 289 4-370 390-684 (690)
87 1o94_A Tmadh, trimethylamine d 100.0 2.9E-31 9.9E-36 282.6 8.7 306 5-388 389-720 (729)
88 3gwf_A Cyclohexanone monooxyge 100.0 2.5E-28 8.6E-33 251.0 14.9 299 5-359 8-455 (540)
89 1ps9_A 2,4-dienoyl-COA reducta 100.0 1.9E-28 6.6E-33 259.2 12.8 259 5-356 373-671 (671)
90 4ap3_A Steroid monooxygenase; 99.9 1.7E-26 5.7E-31 237.9 16.6 184 4-225 20-226 (549)
91 3uox_A Otemo; baeyer-villiger 99.9 2E-26 6.9E-31 237.1 13.6 191 4-225 8-220 (545)
92 1w4x_A Phenylacetone monooxyge 99.9 6.8E-25 2.3E-29 226.5 16.9 302 4-360 15-465 (542)
93 2ywl_A Thioredoxin reductase r 99.9 7.3E-23 2.5E-27 180.3 17.3 158 192-363 3-173 (180)
94 4b63_A L-ornithine N5 monooxyg 99.8 1.1E-18 3.8E-23 178.0 26.3 290 5-326 39-458 (501)
95 2e5v_A L-aspartate oxidase; ar 99.7 4E-19 1.4E-23 180.0 0.4 221 81-358 128-370 (472)
96 2cul_A Glucose-inhibited divis 99.6 4.7E-15 1.6E-19 135.7 15.1 156 191-359 4-230 (232)
97 2gqf_A Hypothetical protein HI 99.6 8.3E-16 2.9E-20 152.2 6.7 120 1-126 1-168 (401)
98 3fpz_A Thiazole biosynthetic e 99.6 1.9E-17 6.6E-22 159.8 -6.5 257 5-359 65-323 (326)
99 3k7m_X 6-hydroxy-L-nicotine ox 99.4 6.9E-13 2.3E-17 132.8 8.5 94 231-327 203-307 (431)
100 3ces_A MNMG, tRNA uridine 5-ca 99.3 8.7E-12 3E-16 128.4 14.1 158 4-220 27-220 (651)
101 1rp0_A ARA6, thiazole biosynth 99.3 6.1E-12 2.1E-16 118.6 10.2 167 190-360 39-274 (284)
102 2zxi_A TRNA uridine 5-carboxym 99.2 1.3E-10 4.5E-15 119.2 16.0 126 4-133 26-187 (637)
103 3dme_A Conserved exported prot 99.2 1.6E-10 5.5E-15 112.6 15.9 59 231-290 149-209 (369)
104 2ywl_A Thioredoxin reductase r 99.1 5E-11 1.7E-15 104.2 7.4 114 6-134 2-118 (180)
105 1kf6_A Fumarate reductase flav 99.1 3E-11 1E-15 125.5 6.8 39 1-42 1-41 (602)
106 3oz2_A Digeranylgeranylglycero 99.1 2.7E-09 9.2E-14 104.9 19.4 36 4-42 3-38 (397)
107 3v76_A Flavoprotein; structura 99.1 1.7E-10 5.9E-15 114.4 7.6 121 1-126 23-187 (417)
108 3dje_A Fructosyl amine: oxygen 99.0 1.3E-09 4.6E-14 109.0 12.8 58 231-289 160-220 (438)
109 1y56_B Sarcosine oxidase; dehy 99.0 2.8E-09 9.4E-14 104.6 14.3 58 231-290 148-205 (382)
110 4dgk_A Phytoene dehydrogenase; 99.0 2E-09 6.8E-14 109.7 11.2 58 231-289 220-277 (501)
111 2bry_A NEDD9 interacting prote 99.0 1.5E-10 5E-15 117.8 2.7 105 189-293 91-233 (497)
112 2cul_A Glucose-inhibited divis 98.9 1.3E-09 4.4E-14 99.4 7.8 115 5-126 3-125 (232)
113 3alj_A 2-methyl-3-hydroxypyrid 98.9 3.4E-09 1.2E-13 104.0 9.1 118 4-127 10-161 (379)
114 3nix_A Flavoprotein/dehydrogen 98.9 3.4E-09 1.2E-13 105.4 8.8 127 1-130 1-170 (421)
115 1s3e_A Amine oxidase [flavin-c 98.9 5.1E-09 1.7E-13 107.3 10.2 50 238-289 218-267 (520)
116 2x3n_A Probable FAD-dependent 98.9 3.4E-09 1.2E-13 104.7 8.5 124 1-127 1-167 (399)
117 2e4g_A Tryptophan halogenase; 98.9 2.4E-08 8.3E-13 102.8 15.2 61 231-292 193-254 (550)
118 2gag_B Heterotetrameric sarcos 98.9 2.1E-08 7.2E-13 99.0 13.8 58 231-290 173-230 (405)
119 2vou_A 2,6-dihydroxypyridine h 98.8 4.4E-09 1.5E-13 103.9 8.5 123 1-126 1-153 (397)
120 3cp8_A TRNA uridine 5-carboxym 98.8 1.1E-08 3.8E-13 105.3 10.4 119 4-126 20-174 (641)
121 3axb_A Putative oxidoreductase 98.8 1.4E-08 4.8E-13 101.9 10.3 59 231-290 180-254 (448)
122 3ps9_A TRNA 5-methylaminomethy 98.8 1E-07 3.4E-12 100.7 17.1 58 231-290 416-473 (676)
123 3ihg_A RDME; flavoenzyme, anth 98.8 1.1E-08 3.6E-13 105.3 9.4 39 1-42 1-39 (535)
124 3pl8_A Pyranose 2-oxidase; sub 98.8 1.6E-11 5.6E-16 127.9 -12.1 54 243-296 271-330 (623)
125 2gf3_A MSOX, monomeric sarcosi 98.8 7.9E-08 2.7E-12 94.3 14.8 72 214-291 135-206 (389)
126 3nlc_A Uncharacterized protein 98.8 1.2E-08 4E-13 104.2 8.6 119 5-126 107-277 (549)
127 3nyc_A D-arginine dehydrogenas 98.8 1.6E-08 5.3E-13 99.0 9.2 57 231-290 153-209 (381)
128 3nrn_A Uncharacterized protein 98.8 2.5E-08 8.6E-13 99.2 10.7 61 231-295 188-248 (421)
129 2i0z_A NAD(FAD)-utilizing dehy 98.8 8E-09 2.7E-13 103.7 7.0 119 5-126 26-191 (447)
130 3e1t_A Halogenase; flavoprotei 98.7 1.8E-08 6.2E-13 102.9 9.4 121 4-127 6-173 (512)
131 4a9w_A Monooxygenase; baeyer-v 98.7 7.8E-08 2.7E-12 92.9 13.5 95 191-288 4-130 (357)
132 2bry_A NEDD9 interacting prote 98.7 1.8E-08 6.2E-13 102.4 9.0 127 4-133 91-237 (497)
133 3cgv_A Geranylgeranyl reductas 98.7 1.9E-08 6.6E-13 99.0 9.0 122 4-128 3-164 (397)
134 3i3l_A Alkylhalidase CMLS; fla 98.7 1.9E-08 6.3E-13 104.1 9.1 119 3-127 21-189 (591)
135 3fmw_A Oxygenase; mithramycin, 98.7 1.3E-08 4.5E-13 105.0 7.8 121 5-128 49-209 (570)
136 3atr_A Conserved archaeal prot 98.7 3.9E-09 1.3E-13 106.1 3.8 126 1-129 2-165 (453)
137 3pvc_A TRNA 5-methylaminomethy 98.7 1.6E-07 5.4E-12 99.4 16.0 58 231-290 411-469 (689)
138 1rp0_A ARA6, thiazole biosynth 98.7 1.8E-08 6.2E-13 94.6 7.4 124 4-130 38-195 (284)
139 3ka7_A Oxidoreductase; structu 98.7 8.4E-08 2.9E-12 95.4 12.5 63 231-295 195-257 (425)
140 3nlc_A Uncharacterized protein 98.7 1.4E-07 4.7E-12 96.3 14.0 102 190-292 107-279 (549)
141 4at0_A 3-ketosteroid-delta4-5a 98.7 8.3E-08 2.9E-12 97.9 11.7 58 233-290 203-264 (510)
142 2oln_A NIKD protein; flavoprot 98.7 3E-07 1E-11 90.6 14.9 57 231-290 152-208 (397)
143 2xdo_A TETX2 protein; tetracyc 98.7 1.2E-07 4.1E-12 93.5 11.9 122 3-127 24-183 (398)
144 1yvv_A Amine oxidase, flavin-c 98.6 1.1E-07 3.8E-12 91.2 11.1 119 5-126 2-162 (336)
145 1pj5_A N,N-dimethylglycine oxi 98.6 2.6E-07 9E-12 99.9 14.5 58 231-290 150-207 (830)
146 3qj4_A Renalase; FAD/NAD(P)-bi 98.6 1.2E-07 4E-12 91.5 10.3 116 6-124 2-163 (342)
147 1ryi_A Glycine oxidase; flavop 98.6 7E-08 2.4E-12 94.5 8.7 35 5-42 17-51 (382)
148 3i6d_A Protoporphyrinogen oxid 98.6 7.9E-08 2.7E-12 96.8 9.1 52 233-288 236-287 (470)
149 2qa1_A PGAE, polyketide oxygen 98.6 8.5E-08 2.9E-12 97.5 9.0 121 3-127 9-166 (500)
150 3lzw_A Ferredoxin--NADP reduct 98.6 1.6E-07 5.6E-12 89.8 10.5 101 191-293 8-129 (332)
151 1y0p_A Fumarate reductase flav 98.6 9.7E-08 3.3E-12 98.8 9.3 35 5-42 126-160 (571)
152 3f8d_A Thioredoxin reductase ( 98.6 2.8E-07 9.7E-12 87.6 11.8 100 191-293 16-128 (323)
153 3v76_A Flavoprotein; structura 98.6 3.1E-07 1.1E-11 91.0 12.2 98 190-290 27-187 (417)
154 3gwf_A Cyclohexanone monooxyge 98.6 3.8E-07 1.3E-11 93.4 13.3 102 191-292 9-151 (540)
155 1qo8_A Flavocytochrome C3 fuma 98.6 7.2E-08 2.5E-12 99.6 7.9 35 5-42 121-155 (566)
156 4ap3_A Steroid monooxygenase; 98.6 3.7E-07 1.3E-11 93.7 13.0 103 190-292 21-163 (549)
157 1qo8_A Flavocytochrome C3 fuma 98.6 3.3E-07 1.1E-11 94.7 12.7 101 191-291 122-313 (566)
158 1y0p_A Fumarate reductase flav 98.6 7.8E-07 2.7E-11 92.0 15.4 100 191-290 127-317 (571)
159 3itj_A Thioredoxin reductase 1 98.6 2.6E-07 8.8E-12 88.6 11.0 101 190-293 22-145 (338)
160 2zbw_A Thioredoxin reductase; 98.5 4.5E-07 1.6E-11 86.9 12.2 97 191-289 6-120 (335)
161 3ab1_A Ferredoxin--NADP reduct 98.5 6.9E-07 2.4E-11 86.7 13.6 99 190-289 14-130 (360)
162 2qa2_A CABE, polyketide oxygen 98.5 1.9E-07 6.5E-12 94.8 9.8 121 4-127 11-167 (499)
163 3da1_A Glycerol-3-phosphate de 98.5 1.1E-07 3.8E-12 97.9 7.9 59 231-290 169-232 (561)
164 3rp8_A Flavoprotein monooxygen 98.5 1.2E-07 4.1E-12 93.8 7.8 121 4-127 22-182 (407)
165 2uzz_A N-methyl-L-tryptophan o 98.5 1.6E-07 5.5E-12 91.5 8.4 35 5-42 2-36 (372)
166 3klj_A NAD(FAD)-dependent dehy 98.5 1.4E-07 4.8E-12 92.6 7.9 101 189-293 8-119 (385)
167 3alj_A 2-methyl-3-hydroxypyrid 98.5 7.8E-07 2.7E-11 87.0 13.2 99 190-293 11-163 (379)
168 3p1w_A Rabgdi protein; GDI RAB 98.5 1.1E-08 3.7E-13 102.3 -0.2 59 231-289 255-313 (475)
169 2aqj_A Tryptophan halogenase, 98.5 9.2E-08 3.2E-12 98.3 6.6 39 1-42 1-42 (538)
170 3fbs_A Oxidoreductase; structu 98.5 6.1E-07 2.1E-11 84.3 11.7 100 191-293 3-115 (297)
171 2q0l_A TRXR, thioredoxin reduc 98.5 8.5E-07 2.9E-11 84.0 12.6 98 192-292 3-116 (311)
172 2xve_A Flavin-containing monoo 98.5 9.3E-07 3.2E-11 88.9 13.5 133 191-324 3-205 (464)
173 3sx6_A Sulfide-quinone reducta 98.5 1.9E-07 6.4E-12 93.4 8.1 100 191-295 5-117 (437)
174 1fl2_A Alkyl hydroperoxide red 98.5 6.8E-07 2.3E-11 84.7 11.7 101 192-292 3-117 (310)
175 1k0i_A P-hydroxybenzoate hydro 98.5 2.9E-07 9.9E-12 90.5 9.3 121 5-128 2-165 (394)
176 3uox_A Otemo; baeyer-villiger 98.5 6.2E-07 2.1E-11 91.9 11.8 102 191-292 10-151 (545)
177 2gqf_A Hypothetical protein HI 98.5 9.8E-07 3.4E-11 87.0 12.8 99 191-291 5-169 (401)
178 2i0z_A NAD(FAD)-utilizing dehy 98.5 1.3E-06 4.5E-11 87.5 13.3 100 190-290 26-191 (447)
179 3c4n_A Uncharacterized protein 98.4 6.8E-08 2.3E-12 95.6 3.6 35 5-42 36-72 (405)
180 2gmh_A Electron transfer flavo 98.4 3.5E-07 1.2E-11 94.7 9.0 36 5-43 35-76 (584)
181 4hb9_A Similarities with proba 98.4 2.5E-07 8.7E-12 91.2 7.7 34 6-42 2-35 (412)
182 3d1c_A Flavin-containing putat 98.4 2.3E-06 7.7E-11 83.2 14.4 98 191-291 5-144 (369)
183 1chu_A Protein (L-aspartate ox 98.4 6.3E-07 2.2E-11 91.8 10.5 55 302-359 353-409 (540)
184 1hyu_A AHPF, alkyl hydroperoxi 98.4 3.1E-06 1.1E-10 86.4 15.6 104 189-292 211-328 (521)
185 2wdq_A Succinate dehydrogenase 98.4 7.1E-07 2.4E-11 92.4 10.9 59 231-289 142-205 (588)
186 2pyx_A Tryptophan halogenase; 98.4 4.2E-07 1.4E-11 93.0 8.9 45 82-127 185-234 (526)
187 2q7v_A Thioredoxin reductase; 98.4 1.3E-06 4.5E-11 83.4 11.7 101 191-292 9-125 (325)
188 3kkj_A Amine oxidase, flavin-c 98.4 1.7E-07 6E-12 86.5 5.4 35 5-42 2-36 (336)
189 4fk1_A Putative thioredoxin re 98.4 1.7E-06 5.7E-11 81.9 12.2 101 192-293 8-120 (304)
190 1vdc_A NTR, NADPH dependent th 98.4 8.3E-07 2.8E-11 85.0 10.1 99 191-293 9-127 (333)
191 2yqu_A 2-oxoglutarate dehydrog 98.4 5.6E-07 1.9E-11 90.4 8.8 98 5-128 167-266 (455)
192 3c96_A Flavin-containing monoo 98.4 3.2E-07 1.1E-11 90.9 6.7 39 1-42 1-39 (410)
193 3hyw_A Sulfide-quinone reducta 98.4 1.3E-07 4.4E-12 94.3 3.5 96 191-291 3-110 (430)
194 2bs2_A Quinol-fumarate reducta 98.4 5.9E-07 2E-11 93.9 8.5 39 1-42 1-39 (660)
195 2x3n_A Probable FAD-dependent 98.4 2.3E-06 7.8E-11 84.2 12.3 101 191-292 7-168 (399)
196 2qcu_A Aerobic glycerol-3-phos 98.4 6E-07 2E-11 91.3 7.9 36 4-42 2-37 (501)
197 2gv8_A Monooxygenase; FMO, FAD 98.3 1.8E-06 6E-11 86.5 11.1 102 190-293 6-182 (447)
198 1d4d_A Flavocytochrome C fumar 98.3 9.8E-07 3.4E-11 91.2 9.3 36 5-43 126-161 (572)
199 3jsk_A Cypbp37 protein; octame 98.3 7E-07 2.4E-11 85.1 7.4 35 5-42 79-115 (344)
200 2gqw_A Ferredoxin reductase; f 98.3 9.6E-07 3.3E-11 87.3 8.7 96 5-127 145-240 (408)
201 2weu_A Tryptophan 5-halogenase 98.3 2E-06 6.8E-11 87.7 11.2 61 231-292 172-232 (511)
202 3nix_A Flavoprotein/dehydrogen 98.3 2E-06 6.8E-11 85.3 10.8 101 191-291 6-167 (421)
203 1trb_A Thioredoxin reductase; 98.3 2.5E-06 8.5E-11 81.1 11.1 98 191-292 6-118 (320)
204 3cty_A Thioredoxin reductase; 98.3 3.4E-06 1.2E-10 80.2 12.0 98 191-292 17-128 (319)
205 3h8l_A NADH oxidase; membrane 98.3 4.5E-07 1.5E-11 89.7 6.0 98 191-293 2-116 (409)
206 1xhc_A NADH oxidase /nitrite r 98.3 5.3E-07 1.8E-11 87.9 6.2 99 189-293 7-116 (367)
207 1q1r_A Putidaredoxin reductase 98.3 1.5E-06 5.2E-11 86.5 9.6 101 190-294 4-118 (431)
208 2vou_A 2,6-dihydroxypyridine h 98.3 3.1E-06 1.1E-10 83.3 11.5 101 190-292 5-155 (397)
209 3h28_A Sulfide-quinone reducta 98.3 3.6E-07 1.2E-11 91.1 4.8 98 191-293 3-112 (430)
210 1yvv_A Amine oxidase, flavin-c 98.3 7.7E-06 2.6E-10 78.2 14.0 97 191-290 3-162 (336)
211 2v3a_A Rubredoxin reductase; a 98.3 9.9E-07 3.4E-11 86.5 7.8 98 5-127 145-244 (384)
212 3vrd_B FCCB subunit, flavocyto 98.3 2.1E-06 7.2E-11 84.6 10.2 101 190-295 2-113 (401)
213 3fg2_P Putative rubredoxin red 98.3 1.2E-06 4.2E-11 86.5 8.4 97 191-292 2-112 (404)
214 1nhp_A NADH peroxidase; oxidor 98.3 1.1E-06 3.7E-11 88.1 8.0 100 4-129 148-249 (447)
215 2a87_A TRXR, TR, thioredoxin r 98.3 2.6E-06 9.1E-11 81.7 10.3 100 190-293 14-129 (335)
216 3ef6_A Toluene 1,2-dioxygenase 98.3 3.2E-06 1.1E-10 83.6 10.8 99 191-293 3-114 (410)
217 2h88_A Succinate dehydrogenase 98.3 8.2E-07 2.8E-11 92.2 6.7 35 5-42 18-52 (621)
218 1ges_A Glutathione reductase; 98.3 2E-06 6.9E-11 86.2 9.3 98 5-128 167-267 (450)
219 2r0c_A REBC; flavin adenine di 98.3 1.5E-06 5.2E-11 89.3 8.2 35 5-42 26-60 (549)
220 3ces_A MNMG, tRNA uridine 5-ca 98.2 7.9E-06 2.7E-10 84.3 13.3 99 191-291 29-182 (651)
221 1lvl_A Dihydrolipoamide dehydr 98.2 1.7E-06 5.7E-11 87.0 7.9 97 5-129 171-271 (458)
222 2dkh_A 3-hydroxybenzoate hydro 98.2 1.4E-06 4.8E-11 91.3 7.5 36 4-42 31-67 (639)
223 3r9u_A Thioredoxin reductase; 98.2 4.1E-06 1.4E-10 79.2 10.1 101 190-293 4-121 (315)
224 2eq6_A Pyruvate dehydrogenase 98.2 2.2E-06 7.6E-11 86.2 8.6 99 5-129 169-274 (464)
225 3lxd_A FAD-dependent pyridine 98.2 2.6E-06 8.8E-11 84.4 9.0 98 5-127 152-252 (415)
226 3oc4_A Oxidoreductase, pyridin 98.2 2.4E-06 8.2E-11 85.7 8.8 101 191-293 3-118 (452)
227 4a5l_A Thioredoxin reductase; 98.2 6.9E-06 2.3E-10 77.8 11.5 98 192-292 6-123 (314)
228 2zxi_A TRNA uridine 5-carboxym 98.2 1.3E-05 4.5E-10 82.3 14.2 100 191-292 28-182 (637)
229 2r9z_A Glutathione amide reduc 98.2 2.5E-06 8.5E-11 85.8 8.8 98 5-128 166-266 (463)
230 1w4x_A Phenylacetone monooxyge 98.2 1.1E-05 3.7E-10 82.9 13.3 98 191-288 17-152 (542)
231 1k0i_A P-hydroxybenzoate hydro 98.2 7.2E-06 2.5E-10 80.5 11.6 101 191-292 3-165 (394)
232 1ryi_A Glycine oxidase; flavop 98.2 8E-06 2.7E-10 79.7 11.9 56 233-291 165-220 (382)
233 3kd9_A Coenzyme A disulfide re 98.2 3.9E-06 1.3E-10 84.0 9.7 100 190-293 3-117 (449)
234 1ebd_A E3BD, dihydrolipoamide 98.2 2.4E-06 8.1E-11 85.8 7.9 98 5-128 170-272 (455)
235 1d4d_A Flavocytochrome C fumar 98.2 1.8E-05 6.2E-10 81.7 14.5 115 177-291 111-318 (572)
236 3s5w_A L-ornithine 5-monooxyge 98.2 3.3E-06 1.1E-10 84.8 8.6 102 192-293 32-195 (463)
237 1c0p_A D-amino acid oxidase; a 98.2 1.4E-06 4.9E-11 84.5 5.7 39 1-42 2-40 (363)
238 4eqs_A Coenzyme A disulfide re 98.2 8.3E-06 2.9E-10 81.3 11.3 95 5-127 147-241 (437)
239 2gjc_A Thiazole biosynthetic e 98.2 5.6E-06 1.9E-10 78.4 9.3 36 5-43 65-102 (326)
240 2hqm_A GR, grase, glutathione 98.2 4.5E-06 1.5E-10 84.3 9.2 98 5-128 185-287 (479)
241 3ics_A Coenzyme A-disulfide re 98.1 4.3E-06 1.5E-10 86.7 9.0 103 189-293 35-155 (588)
242 1onf_A GR, grase, glutathione 98.1 5.8E-06 2E-10 84.0 9.8 98 5-128 176-277 (500)
243 3gyx_A Adenylylsulfate reducta 98.1 3.1E-06 1.1E-10 88.4 7.8 35 5-42 22-62 (662)
244 3atr_A Conserved archaeal prot 98.1 1.1E-05 3.9E-10 80.8 11.5 101 191-292 7-164 (453)
245 2gmh_A Electron transfer flavo 98.1 2.8E-05 9.6E-10 80.4 14.6 102 191-292 36-219 (584)
246 1fec_A Trypanothione reductase 98.1 5.9E-06 2E-10 83.7 9.4 98 5-128 187-290 (490)
247 3qj4_A Renalase; FAD/NAD(P)-bi 98.1 7.1E-06 2.4E-10 78.9 9.6 94 192-287 3-162 (342)
248 2wpf_A Trypanothione reductase 98.1 6.2E-06 2.1E-10 83.6 9.5 98 5-128 191-294 (495)
249 3cgv_A Geranylgeranyl reductas 98.1 1.4E-05 4.9E-10 78.2 11.8 100 191-291 5-163 (397)
250 3i3l_A Alkylhalidase CMLS; fla 98.1 2.3E-05 7.9E-10 81.0 13.7 101 190-291 23-189 (591)
251 1v59_A Dihydrolipoamide dehydr 98.1 5E-06 1.7E-10 84.0 8.4 98 5-128 183-289 (478)
252 3iwa_A FAD-dependent pyridine 98.1 7E-06 2.4E-10 82.7 9.3 102 190-293 3-128 (472)
253 4b1b_A TRXR, thioredoxin reduc 98.1 9.9E-06 3.4E-10 82.7 10.4 98 5-129 223-322 (542)
254 1mo9_A ORF3; nucleotide bindin 98.1 6.7E-06 2.3E-10 84.0 9.1 97 6-128 215-318 (523)
255 4gcm_A TRXR, thioredoxin reduc 98.1 2.3E-05 7.9E-10 74.2 12.1 98 192-293 8-119 (312)
256 2gjc_A Thiazole biosynthetic e 98.1 4.5E-05 1.5E-09 72.2 13.8 167 190-359 65-323 (326)
257 3cp8_A TRNA uridine 5-carboxym 98.1 2.3E-05 7.8E-10 80.8 12.7 100 190-291 21-175 (641)
258 1zmd_A Dihydrolipoyl dehydroge 98.1 7.9E-06 2.7E-10 82.4 9.2 99 5-128 178-284 (474)
259 2bc0_A NADH oxidase; flavoprot 98.1 6.2E-06 2.1E-10 83.5 8.4 98 5-128 194-293 (490)
260 3rp8_A Flavoprotein monooxygen 98.1 1.7E-05 5.9E-10 78.1 11.3 100 190-293 23-184 (407)
261 2a8x_A Dihydrolipoyl dehydroge 98.1 7.4E-06 2.5E-10 82.4 8.7 98 5-128 171-273 (464)
262 1ojt_A Surface protein; redox- 98.1 4.4E-06 1.5E-10 84.5 6.9 98 5-128 185-288 (482)
263 1xdi_A RV3303C-LPDA; reductase 98.1 1.1E-05 3.8E-10 81.9 9.7 98 5-128 182-281 (499)
264 2xdo_A TETX2 protein; tetracyc 98.0 2.5E-05 8.5E-10 76.8 11.7 101 190-292 26-184 (398)
265 2uzz_A N-methyl-L-tryptophan o 98.0 2.8E-05 9.7E-10 75.4 11.8 55 233-290 150-204 (372)
266 4hb9_A Similarities with proba 98.0 4.7E-05 1.6E-09 74.8 13.4 100 192-292 3-168 (412)
267 2cdu_A NADPH oxidase; flavoenz 98.0 7.9E-06 2.7E-10 81.8 7.7 98 5-128 149-249 (452)
268 3e1t_A Halogenase; flavoprotei 98.0 4.3E-05 1.5E-09 77.8 13.2 101 191-292 8-174 (512)
269 2qae_A Lipoamide, dihydrolipoy 98.0 1.1E-05 3.7E-10 81.2 8.6 98 5-128 174-278 (468)
270 3fmw_A Oxygenase; mithramycin, 98.0 2.5E-05 8.6E-10 80.4 11.3 99 191-291 50-208 (570)
271 1dxl_A Dihydrolipoamide dehydr 98.0 6.9E-06 2.4E-10 82.7 7.0 98 5-128 177-281 (470)
272 3ntd_A FAD-dependent pyridine 98.0 8.4E-06 2.9E-10 84.1 7.6 101 191-293 2-120 (565)
273 2vdc_G Glutamate synthase [NAD 98.0 4.2E-06 1.4E-10 83.8 5.1 90 189-289 121-218 (456)
274 3ihg_A RDME; flavoenzyme, anth 98.0 4E-05 1.4E-09 78.5 12.5 100 191-290 6-183 (535)
275 3o0h_A Glutathione reductase; 98.0 1.7E-05 5.9E-10 80.1 9.3 98 5-128 191-290 (484)
276 2aqj_A Tryptophan halogenase, 98.0 6.3E-05 2.2E-09 77.0 13.5 56 236-292 169-224 (538)
277 3cgb_A Pyridine nucleotide-dis 98.0 1.4E-05 4.8E-10 80.7 8.2 101 191-293 37-155 (480)
278 1pn0_A Phenol 2-monooxygenase; 98.0 8.3E-06 2.8E-10 85.6 6.7 35 5-42 8-47 (665)
279 1zk7_A HGII, reductase, mercur 97.9 2E-05 6.8E-10 79.3 9.1 96 5-128 176-273 (467)
280 3jsk_A Cypbp37 protein; octame 97.9 9.4E-05 3.2E-09 70.4 12.9 168 190-360 79-334 (344)
281 2yg5_A Putrescine oxidase; oxi 97.9 5.5E-06 1.9E-10 82.9 4.6 40 1-43 1-40 (453)
282 4g6h_A Rotenone-insensitive NA 97.9 9.8E-06 3.4E-10 82.2 6.4 101 190-293 42-172 (502)
283 3ic9_A Dihydrolipoamide dehydr 97.9 2.2E-05 7.6E-10 79.4 9.0 98 5-129 174-277 (492)
284 1m6i_A Programmed cell death p 97.9 1.3E-05 4.4E-10 81.3 6.9 98 5-127 180-283 (493)
285 3l8k_A Dihydrolipoyl dehydroge 97.9 1.7E-05 5.7E-10 79.8 7.6 98 191-293 5-147 (466)
286 2bcg_G Secretory pathway GDP d 97.9 1E-05 3.5E-10 81.1 6.0 60 231-291 241-301 (453)
287 4dna_A Probable glutathione re 97.9 3.1E-05 1E-09 77.8 9.5 97 5-128 170-270 (463)
288 3lad_A Dihydrolipoamide dehydr 97.9 3.7E-05 1.3E-09 77.5 9.7 98 5-128 180-282 (476)
289 4gde_A UDP-galactopyranose mut 97.9 8.3E-06 2.9E-10 82.9 4.8 54 231-288 221-274 (513)
290 3dgh_A TRXR-1, thioredoxin red 97.9 2.6E-05 9E-10 78.7 8.1 97 5-128 187-291 (483)
291 3c96_A Flavin-containing monoo 97.8 5.6E-05 1.9E-09 74.6 10.3 101 190-293 4-172 (410)
292 3urh_A Dihydrolipoyl dehydroge 97.8 4E-05 1.4E-09 77.6 9.2 98 5-128 198-302 (491)
293 2qa2_A CABE, polyketide oxygen 97.8 0.00012 4.1E-09 74.1 12.7 101 190-292 12-168 (499)
294 2b9w_A Putative aminooxidase; 97.8 1.5E-05 5.1E-10 79.0 5.9 53 233-288 204-256 (424)
295 3dk9_A Grase, GR, glutathione 97.8 3.5E-05 1.2E-09 77.7 8.6 98 5-128 187-295 (478)
296 1v0j_A UDP-galactopyranose mut 97.8 1.6E-05 5.6E-10 78.2 5.9 38 3-43 5-43 (399)
297 1rsg_A FMS1 protein; FAD bindi 97.8 1E-05 3.5E-10 82.5 4.5 37 4-43 7-44 (516)
298 3dgz_A Thioredoxin reductase 2 97.8 6.1E-05 2.1E-09 76.2 9.6 97 5-128 185-289 (488)
299 2qa1_A PGAE, polyketide oxygen 97.8 0.00014 4.7E-09 73.7 12.2 102 189-292 10-167 (500)
300 1y56_A Hypothetical protein PH 97.8 3.2E-05 1.1E-09 78.3 7.1 99 191-292 109-221 (493)
301 2jae_A L-amino acid oxidase; o 97.8 2.1E-05 7.1E-10 79.6 5.6 39 2-43 8-46 (489)
302 3ihm_A Styrene monooxygenase A 97.7 1.6E-05 5.6E-10 79.0 4.6 34 5-41 22-55 (430)
303 3c4n_A Uncharacterized protein 97.7 5.1E-05 1.8E-09 74.7 7.8 54 234-290 174-236 (405)
304 3hdq_A UDP-galactopyranose mut 97.7 3E-05 1E-09 75.9 5.9 37 4-43 28-64 (397)
305 2e1m_A L-glutamate oxidase; L- 97.7 2.7E-05 9.3E-10 75.5 5.5 37 3-42 42-79 (376)
306 3nks_A Protoporphyrinogen oxid 97.7 2E-05 7E-10 79.3 4.6 55 232-288 234-288 (477)
307 2qcu_A Aerobic glycerol-3-phos 97.7 0.00029 9.9E-09 71.4 12.7 55 234-290 151-210 (501)
308 2gag_A Heterotetrameric sarcos 97.7 0.00012 4.2E-09 80.0 10.5 101 190-292 128-255 (965)
309 4dsg_A UDP-galactopyranose mut 97.7 3.8E-05 1.3E-09 77.6 6.0 37 4-43 8-45 (484)
310 2pyx_A Tryptophan halogenase; 97.7 0.0003 1E-08 71.7 12.7 56 236-292 179-235 (526)
311 1cjc_A Protein (adrenodoxin re 97.6 1.7E-05 5.8E-10 79.5 2.8 91 189-290 5-106 (460)
312 3qfa_A Thioredoxin reductase 1 97.6 0.00016 5.4E-09 73.7 10.0 97 5-128 210-317 (519)
313 1sez_A Protoporphyrinogen oxid 97.6 3.4E-05 1.1E-09 78.3 4.7 37 4-43 12-48 (504)
314 1gte_A Dihydropyrimidine dehyd 97.6 2.5E-05 8.6E-10 86.0 4.0 94 190-292 187-290 (1025)
315 2e5v_A L-aspartate oxidase; ar 97.6 0.00036 1.2E-08 70.1 12.0 99 192-292 1-178 (472)
316 3lov_A Protoporphyrinogen oxid 97.6 4.1E-05 1.4E-09 77.1 5.1 36 5-43 4-41 (475)
317 3k30_A Histamine dehydrogenase 97.6 9.7E-05 3.3E-09 78.0 8.0 97 5-126 523-624 (690)
318 3g3e_A D-amino-acid oxidase; F 97.6 3.7E-05 1.3E-09 74.1 4.1 33 6-41 1-39 (351)
319 3c4a_A Probable tryptophan hyd 97.6 4.8E-05 1.6E-09 74.3 4.8 35 6-43 1-37 (381)
320 2rgh_A Alpha-glycerophosphate 97.6 3.5E-05 1.2E-09 79.4 3.9 58 231-289 187-249 (571)
321 1d5t_A Guanine nucleotide diss 97.5 8E-05 2.7E-09 74.0 5.9 59 231-291 233-291 (433)
322 2x8g_A Thioredoxin glutathione 97.5 0.00032 1.1E-08 72.8 10.5 97 5-128 286-397 (598)
323 1lqt_A FPRA; NADP+ derivative, 97.5 1.8E-05 6.3E-10 79.2 1.0 89 190-289 3-107 (456)
324 2ivd_A PPO, PPOX, protoporphyr 97.5 6.8E-05 2.3E-09 75.5 5.0 37 4-43 15-51 (478)
325 1ps9_A 2,4-dienoyl-COA reducta 97.5 0.00011 3.8E-09 77.3 6.8 87 190-293 373-470 (671)
326 2iid_A L-amino-acid oxidase; f 97.5 7.9E-05 2.7E-09 75.5 5.3 37 4-43 32-68 (498)
327 2bi7_A UDP-galactopyranose mut 97.5 7.7E-05 2.7E-09 72.9 5.0 36 5-43 3-38 (384)
328 3g5s_A Methylenetetrahydrofola 97.5 9.6E-05 3.3E-09 71.1 5.4 33 6-41 2-34 (443)
329 2vvm_A Monoamine oxidase N; FA 97.5 7.9E-05 2.7E-09 75.4 5.1 56 231-288 254-310 (495)
330 1i8t_A UDP-galactopyranose mut 97.5 8.7E-05 3E-09 72.1 4.9 35 6-43 2-36 (367)
331 2dkh_A 3-hydroxybenzoate hydro 97.4 0.00084 2.9E-08 70.1 11.5 101 191-291 33-212 (639)
332 1kf6_A Fumarate reductase flav 97.3 0.0012 4.2E-08 68.2 11.5 97 191-288 6-195 (602)
333 2r0c_A REBC; flavin adenine di 97.2 0.0016 5.6E-08 66.6 11.4 96 191-291 27-197 (549)
334 1jnr_A Adenylylsulfate reducta 97.2 0.00022 7.5E-09 74.5 5.0 35 5-42 22-60 (643)
335 3c4a_A Probable tryptophan hyd 97.2 0.00019 6.5E-09 70.0 4.0 87 192-291 2-144 (381)
336 2rgh_A Alpha-glycerophosphate 97.2 0.0019 6.6E-08 66.4 11.7 34 190-223 32-65 (571)
337 1chu_A Protein (L-aspartate ox 97.2 0.0011 3.7E-08 67.7 9.5 33 191-224 9-41 (540)
338 1b37_A Protein (polyamine oxid 97.2 0.0003 1E-08 70.6 5.3 54 233-288 207-268 (472)
339 1o94_A Tmadh, trimethylamine d 97.2 0.00048 1.6E-08 73.1 7.0 97 5-127 528-647 (729)
340 4g65_A TRK system potassium up 97.1 0.00054 1.8E-08 68.4 6.4 101 166-289 209-311 (461)
341 1ju2_A HydroxynitrIle lyase; f 97.1 0.00019 6.4E-09 73.4 3.0 35 4-42 25-59 (536)
342 1kdg_A CDH, cellobiose dehydro 97.1 0.00042 1.4E-08 71.0 5.3 58 237-295 201-266 (546)
343 4gut_A Lysine-specific histone 97.0 0.00047 1.6E-08 73.3 5.2 41 245-287 542-582 (776)
344 2h88_A Succinate dehydrogenase 97.0 0.0042 1.4E-07 64.3 11.7 51 239-290 162-217 (621)
345 4gut_A Lysine-specific histone 97.0 0.0054 1.8E-07 65.2 12.7 35 191-225 337-371 (776)
346 3t37_A Probable dehydrogenase; 97.0 0.00044 1.5E-08 70.4 4.2 52 243-295 222-276 (526)
347 2z3y_A Lysine-specific histone 96.9 0.00065 2.2E-08 71.3 5.3 37 4-43 106-142 (662)
348 3q9t_A Choline dehydrogenase a 96.9 0.00055 1.9E-08 70.3 4.3 37 4-42 5-41 (577)
349 2xag_A Lysine-specific histone 96.9 0.00084 2.9E-08 71.9 5.8 37 4-43 277-313 (852)
350 2bs2_A Quinol-fumarate reducta 96.9 0.0081 2.8E-07 62.7 13.0 51 238-289 164-219 (660)
351 2jbv_A Choline oxidase; alcoho 96.8 0.00084 2.9E-08 68.7 4.6 53 237-289 214-272 (546)
352 3ayj_A Pro-enzyme of L-phenyla 96.8 0.00061 2.1E-08 71.2 3.4 34 5-41 56-97 (721)
353 1coy_A Cholesterol oxidase; ox 96.7 0.0013 4.5E-08 66.6 5.3 36 4-42 10-45 (507)
354 1gpe_A Protein (glucose oxidas 96.7 0.0013 4.4E-08 67.9 5.2 56 240-295 239-302 (587)
355 3qvp_A Glucose oxidase; oxidor 96.7 0.00095 3.3E-08 68.6 4.1 60 236-295 231-298 (583)
356 1pn0_A Phenol 2-monooxygenase; 96.7 0.01 3.4E-07 62.2 11.7 32 192-223 10-46 (665)
357 1jnr_A Adenylylsulfate reducta 96.6 0.013 4.4E-07 61.1 12.3 50 240-289 159-217 (643)
358 1n4w_A CHOD, cholesterol oxida 96.6 0.0015 5.2E-08 66.1 5.0 36 4-42 4-39 (504)
359 4b63_A L-ornithine N5 monooxyg 96.6 0.01 3.5E-07 59.9 10.7 102 192-293 41-217 (501)
360 3fim_B ARYL-alcohol oxidase; A 96.4 0.0013 4.4E-08 67.4 3.0 55 235-289 211-275 (566)
361 3kkj_A Amine oxidase, flavin-c 96.0 0.0062 2.1E-07 55.2 5.3 34 192-225 4-37 (336)
362 3gyx_A Adenylylsulfate reducta 96.0 0.024 8.3E-07 59.1 10.0 51 238-288 172-231 (662)
363 1vg0_A RAB proteins geranylger 95.6 0.012 4.2E-07 60.6 5.9 61 231-291 377-438 (650)
364 3eag_A UDP-N-acetylmuramate:L- 95.6 0.02 6.8E-07 54.2 6.8 80 189-295 3-83 (326)
365 3lk7_A UDP-N-acetylmuramoylala 95.5 0.016 5.5E-07 57.6 6.1 82 189-295 8-89 (451)
366 3fpz_A Thiazole biosynthetic e 95.3 0.014 4.9E-07 55.2 4.7 76 180-255 55-139 (326)
367 4dgk_A Phytoene dehydrogenase; 95.2 0.014 4.7E-07 58.8 4.6 36 191-226 2-37 (501)
368 1id1_A Putative potassium chan 95.1 0.031 1.1E-06 46.4 5.9 33 5-40 3-35 (153)
369 3llv_A Exopolyphosphatase-rela 95.1 0.022 7.4E-07 46.5 4.8 34 5-41 6-39 (141)
370 1lss_A TRK system potassium up 94.8 0.032 1.1E-06 45.1 4.9 34 5-41 4-37 (140)
371 3fwz_A Inner membrane protein 94.7 0.035 1.2E-06 45.3 4.9 34 5-41 7-40 (140)
372 3ic5_A Putative saccharopine d 94.7 0.032 1.1E-06 43.6 4.5 34 5-41 5-39 (118)
373 2g1u_A Hypothetical protein TM 94.6 0.038 1.3E-06 46.0 5.1 34 5-41 19-52 (155)
374 3dfz_A SIRC, precorrin-2 dehyd 94.6 0.02 6.8E-07 50.8 3.4 107 189-326 30-141 (223)
375 3eag_A UDP-N-acetylmuramate:L- 94.6 0.045 1.5E-06 51.8 6.1 77 4-128 3-80 (326)
376 3oz2_A Digeranylgeranylglycero 94.6 0.033 1.1E-06 53.7 5.2 100 192-292 6-164 (397)
377 4gx0_A TRKA domain protein; me 94.5 0.058 2E-06 55.2 7.2 170 3-228 125-386 (565)
378 2iid_A L-amino-acid oxidase; f 94.5 0.04 1.4E-06 55.3 5.9 39 189-227 32-70 (498)
379 4hv4_A UDP-N-acetylmuramate--L 94.3 0.035 1.2E-06 55.8 4.8 72 4-126 21-93 (494)
380 2vvm_A Monoamine oxidase N; FA 94.2 0.1 3.6E-06 52.2 8.2 35 6-43 40-74 (495)
381 3tl2_A Malate dehydrogenase; c 94.1 0.05 1.7E-06 51.1 5.1 38 1-40 4-41 (315)
382 2hmt_A YUAA protein; RCK, KTN, 93.7 0.069 2.3E-06 43.3 4.8 34 5-41 6-39 (144)
383 4e12_A Diketoreductase; oxidor 93.7 0.066 2.3E-06 49.5 5.2 37 1-41 1-37 (283)
384 3nrn_A Uncharacterized protein 93.7 0.071 2.4E-06 52.2 5.6 34 192-225 2-35 (421)
385 1vg0_A RAB proteins geranylger 93.4 0.21 7.2E-06 51.5 8.7 37 4-43 7-43 (650)
386 3lk7_A UDP-N-acetylmuramoylala 93.4 0.074 2.5E-06 52.7 5.2 77 4-127 8-85 (451)
387 2b9w_A Putative aminooxidase; 93.3 0.1 3.5E-06 51.1 6.1 61 189-250 5-82 (424)
388 3ka7_A Oxidoreductase; structu 93.2 0.078 2.7E-06 51.9 5.1 34 192-225 2-35 (425)
389 2bcg_G Secretory pathway GDP d 93.2 0.12 4.1E-06 51.3 6.4 38 4-44 10-47 (453)
390 3dme_A Conserved exported prot 93.1 0.086 3E-06 50.2 5.2 34 191-224 5-38 (369)
391 1d5t_A Guanine nucleotide diss 93.1 0.087 3E-06 51.9 5.3 39 2-43 3-41 (433)
392 3l4b_C TRKA K+ channel protien 93.1 0.074 2.5E-06 47.0 4.3 32 7-41 2-33 (218)
393 3ihm_A Styrene monooxygenase A 93.0 0.069 2.4E-06 52.6 4.4 34 190-223 22-55 (430)
394 3i83_A 2-dehydropantoate 2-red 92.9 0.24 8.3E-06 46.5 7.9 82 191-295 3-88 (320)
395 2e1m_A L-glutamate oxidase; L- 92.9 0.12 3.9E-06 49.9 5.6 37 189-225 43-80 (376)
396 3k7m_X 6-hydroxy-L-nicotine ox 92.9 0.097 3.3E-06 51.3 5.2 34 192-225 3-36 (431)
397 1bg6_A N-(1-D-carboxylethyl)-L 92.9 0.092 3.1E-06 50.1 4.9 37 1-41 1-37 (359)
398 3dfz_A SIRC, precorrin-2 dehyd 92.9 0.11 3.7E-06 46.1 4.9 34 4-40 30-63 (223)
399 3g5s_A Methylenetetrahydrofola 92.8 0.12 4E-06 49.9 5.3 33 191-223 2-34 (443)
400 3c85_A Putative glutathione-re 92.8 0.13 4.5E-06 43.8 5.3 34 5-41 39-73 (183)
401 2g1u_A Hypothetical protein TM 92.7 0.14 4.6E-06 42.5 5.1 36 189-224 18-53 (155)
402 2oln_A NIKD protein; flavoprot 92.6 0.1 3.5E-06 50.5 4.9 35 191-225 5-39 (397)
403 1y6j_A L-lactate dehydrogenase 92.6 0.13 4.6E-06 48.3 5.4 37 4-41 6-42 (318)
404 2jae_A L-amino acid oxidase; o 92.5 0.14 4.7E-06 51.2 5.8 38 190-227 11-48 (489)
405 2gf3_A MSOX, monomeric sarcosi 92.5 0.11 3.9E-06 49.9 5.1 34 191-224 4-37 (389)
406 2ewd_A Lactate dehydrogenase,; 92.5 0.12 4.3E-06 48.5 5.2 38 2-41 1-38 (317)
407 3k96_A Glycerol-3-phosphate de 92.5 0.13 4.5E-06 49.2 5.3 38 1-41 25-62 (356)
408 1s3e_A Amine oxidase [flavin-c 92.5 0.13 4.4E-06 52.0 5.5 60 190-250 4-80 (520)
409 1y56_B Sarcosine oxidase; dehy 92.4 0.12 4.1E-06 49.6 5.1 34 190-223 5-38 (382)
410 3pqe_A L-LDH, L-lactate dehydr 92.4 0.13 4.4E-06 48.5 5.1 40 1-41 1-40 (326)
411 4gde_A UDP-galactopyranose mut 92.4 0.09 3.1E-06 52.8 4.3 36 192-227 12-48 (513)
412 1rsg_A FMS1 protein; FAD bindi 92.4 0.12 4.2E-06 52.1 5.2 36 190-225 8-44 (516)
413 3fwz_A Inner membrane protein 92.3 0.47 1.6E-05 38.4 7.8 77 190-290 7-83 (140)
414 1f0y_A HCDH, L-3-hydroxyacyl-C 92.3 0.15 5E-06 47.5 5.3 34 5-41 15-48 (302)
415 3nyc_A D-arginine dehydrogenas 92.2 0.13 4.3E-06 49.4 4.9 35 190-225 9-43 (381)
416 3qha_A Putative oxidoreductase 92.2 0.1 3.6E-06 48.5 4.2 35 4-41 14-48 (296)
417 1pzg_A LDH, lactate dehydrogen 92.2 0.16 5.3E-06 48.1 5.3 34 5-41 9-43 (331)
418 1c0p_A D-amino acid oxidase; a 92.0 0.13 4.6E-06 49.0 4.9 34 190-223 6-39 (363)
419 2ivd_A PPO, PPOX, protoporphyr 92.0 0.15 5E-06 50.8 5.3 36 190-225 16-51 (478)
420 4hv4_A UDP-N-acetylmuramate--L 92.0 0.17 5.7E-06 50.8 5.7 77 189-295 21-98 (494)
421 2x5o_A UDP-N-acetylmuramoylala 92.0 0.056 1.9E-06 53.4 2.1 78 189-295 4-81 (439)
422 4huj_A Uncharacterized protein 92.0 0.099 3.4E-06 46.3 3.5 35 4-41 22-57 (220)
423 2x5o_A UDP-N-acetylmuramoylala 91.8 0.13 4.5E-06 50.7 4.6 36 4-42 4-39 (439)
424 1t2d_A LDH-P, L-lactate dehydr 91.8 0.18 6.1E-06 47.5 5.2 36 4-41 3-38 (322)
425 2uyy_A N-PAC protein; long-cha 91.8 0.2 6.9E-06 46.9 5.7 37 2-41 27-63 (316)
426 1id1_A Putative potassium chan 91.8 0.24 8.2E-06 40.8 5.5 33 190-222 3-35 (153)
427 3mog_A Probable 3-hydroxybutyr 91.7 0.19 6.4E-06 50.2 5.5 38 1-41 1-38 (483)
428 3nks_A Protoporphyrinogen oxid 91.6 0.26 8.7E-06 49.0 6.6 37 6-43 3-39 (477)
429 2a9f_A Putative malic enzyme ( 91.6 0.16 5.5E-06 48.6 4.7 35 5-41 188-222 (398)
430 1kyq_A Met8P, siroheme biosynt 91.6 0.093 3.2E-06 48.0 3.0 35 4-41 12-46 (274)
431 3i6d_A Protoporphyrinogen oxid 91.5 0.1 3.6E-06 51.6 3.5 37 190-226 5-47 (470)
432 1sez_A Protoporphyrinogen oxid 91.5 0.2 6.7E-06 50.3 5.5 37 190-226 13-49 (504)
433 2yg5_A Putrescine oxidase; oxi 91.4 0.2 6.9E-06 49.4 5.5 35 191-225 6-40 (453)
434 4dio_A NAD(P) transhydrogenase 91.4 0.17 5.9E-06 48.9 4.8 34 5-41 190-223 (405)
435 2bi7_A UDP-galactopyranose mut 91.3 0.17 5.9E-06 48.9 4.8 36 191-226 4-39 (384)
436 1vl6_A Malate oxidoreductase; 91.3 0.2 7E-06 47.9 5.1 35 5-41 192-226 (388)
437 3hn2_A 2-dehydropantoate 2-red 91.3 0.31 1E-05 45.6 6.3 83 191-295 3-86 (312)
438 3dje_A Fructosyl amine: oxygen 91.2 0.22 7.6E-06 48.9 5.6 36 190-225 6-42 (438)
439 3hdq_A UDP-galactopyranose mut 91.2 0.21 7.1E-06 48.5 5.2 36 190-225 29-64 (397)
440 4e21_A 6-phosphogluconate dehy 91.2 0.2 6.8E-06 47.9 4.9 37 2-41 19-55 (358)
441 2gag_B Heterotetrameric sarcos 91.1 0.16 5.4E-06 49.2 4.3 33 191-223 22-56 (405)
442 1v0j_A UDP-galactopyranose mut 90.9 0.22 7.6E-06 48.4 5.1 36 190-225 7-43 (399)
443 3llv_A Exopolyphosphatase-rela 90.9 0.23 8E-06 40.1 4.5 32 190-221 6-37 (141)
444 3ado_A Lambda-crystallin; L-gu 90.8 0.2 6.9E-06 46.9 4.5 36 190-225 6-41 (319)
445 2e4g_A Tryptophan halogenase; 90.8 0.23 7.9E-06 50.5 5.3 35 190-224 25-62 (550)
446 3hwr_A 2-dehydropantoate 2-red 90.7 0.72 2.5E-05 43.2 8.3 85 189-295 18-103 (318)
447 3ghy_A Ketopantoate reductase 90.7 0.26 9E-06 46.6 5.3 33 5-40 3-35 (335)
448 3p2y_A Alanine dehydrogenase/p 90.6 0.22 7.7E-06 47.7 4.7 34 5-41 184-217 (381)
449 3pvc_A TRNA 5-methylaminomethy 90.6 0.24 8.2E-06 52.0 5.3 36 190-225 264-299 (689)
450 3i83_A 2-dehydropantoate 2-red 90.6 0.24 8.2E-06 46.5 4.9 33 6-41 3-35 (320)
451 4ffl_A PYLC; amino acid, biosy 90.4 0.3 1E-05 46.6 5.5 35 6-43 2-36 (363)
452 3ps9_A TRNA 5-methylaminomethy 90.4 0.24 8.2E-06 51.8 5.2 34 191-224 273-306 (676)
453 3hn7_A UDP-N-acetylmuramate-L- 90.4 0.32 1.1E-05 49.1 5.9 79 189-295 18-97 (524)
454 1i8t_A UDP-galactopyranose mut 90.2 0.24 8.3E-06 47.5 4.7 34 192-225 3-36 (367)
455 3ghy_A Ketopantoate reductase 90.2 0.42 1.4E-05 45.2 6.2 78 190-289 3-81 (335)
456 3g3e_A D-amino-acid oxidase; F 90.1 0.18 6.2E-06 47.8 3.6 32 192-223 2-39 (351)
457 3hn2_A 2-dehydropantoate 2-red 90.1 0.28 9.5E-06 45.9 4.8 32 6-40 3-34 (312)
458 2ew2_A 2-dehydropantoate 2-red 90.0 0.28 9.5E-06 45.7 4.8 33 6-41 4-36 (316)
459 3g17_A Similar to 2-dehydropan 89.9 0.28 9.5E-06 45.4 4.6 33 6-41 3-35 (294)
460 2qyt_A 2-dehydropantoate 2-red 89.9 0.21 7.1E-06 46.7 3.8 36 1-39 4-45 (317)
461 1jw9_B Molybdopterin biosynthe 89.9 0.3 1E-05 44.1 4.7 36 5-42 31-66 (249)
462 1lss_A TRK system potassium up 89.8 0.39 1.3E-05 38.4 4.9 32 190-221 4-35 (140)
463 2izz_A Pyrroline-5-carboxylate 89.8 0.3 1E-05 45.9 4.8 40 2-41 19-59 (322)
464 3lov_A Protoporphyrinogen oxid 89.8 0.24 8.1E-06 49.2 4.3 35 190-224 4-40 (475)
465 4ezb_A Uncharacterized conserv 89.7 0.3 1E-05 45.8 4.7 35 190-224 24-59 (317)
466 3g79_A NDP-N-acetyl-D-galactos 89.7 0.26 8.9E-06 49.0 4.4 36 4-42 17-54 (478)
467 2z3y_A Lysine-specific histone 89.6 0.35 1.2E-05 50.4 5.6 37 189-225 106-142 (662)
468 2xag_A Lysine-specific histone 89.6 0.38 1.3E-05 51.5 5.9 36 190-225 278-313 (852)
469 1u8x_X Maltose-6'-phosphate gl 89.5 0.24 8.1E-06 49.2 3.9 41 1-41 24-67 (472)
470 1lld_A L-lactate dehydrogenase 89.5 0.33 1.1E-05 45.4 4.9 36 5-41 7-42 (319)
471 3ic5_A Putative saccharopine d 89.4 0.34 1.2E-05 37.5 4.2 33 190-222 5-38 (118)
472 2dpo_A L-gulonate 3-dehydrogen 89.4 0.4 1.4E-05 45.0 5.3 34 5-41 6-39 (319)
473 3l9w_A Glutathione-regulated p 89.3 0.33 1.1E-05 47.4 4.8 34 5-41 4-37 (413)
474 3qsg_A NAD-binding phosphogluc 89.3 0.45 1.5E-05 44.5 5.6 90 190-309 24-115 (312)
475 2weu_A Tryptophan 5-halogenase 89.3 0.2 6.9E-06 50.4 3.4 33 191-223 3-38 (511)
476 3d0o_A L-LDH 1, L-lactate dehy 89.3 0.46 1.6E-05 44.6 5.6 36 4-40 5-40 (317)
477 2hmt_A YUAA protein; RCK, KTN, 89.3 0.4 1.4E-05 38.5 4.7 33 190-222 6-38 (144)
478 3qsg_A NAD-binding phosphogluc 89.3 0.32 1.1E-05 45.5 4.5 34 4-40 23-57 (312)
479 3g0o_A 3-hydroxyisobutyrate de 89.2 0.37 1.3E-05 44.8 4.9 34 5-41 7-40 (303)
480 3dhn_A NAD-dependent epimerase 89.0 0.31 1E-05 42.9 4.1 35 4-41 3-38 (227)
481 3gpi_A NAD-dependent epimerase 89.0 0.5 1.7E-05 43.2 5.7 34 5-41 3-36 (286)
482 2raf_A Putative dinucleotide-b 89.0 0.45 1.5E-05 41.6 5.1 35 5-42 19-53 (209)
483 1b37_A Protein (polyamine oxid 89.0 0.5 1.7E-05 46.9 6.0 37 3-42 2-39 (472)
484 3cky_A 2-hydroxymethyl glutara 88.9 0.34 1.2E-05 44.9 4.5 36 3-41 2-37 (301)
485 4dsg_A UDP-galactopyranose mut 88.9 0.45 1.5E-05 47.5 5.6 36 190-225 9-45 (484)
486 1x13_A NAD(P) transhydrogenase 88.9 0.35 1.2E-05 47.0 4.6 34 5-41 172-205 (401)
487 2q3e_A UDP-glucose 6-dehydroge 88.8 0.35 1.2E-05 48.1 4.7 35 4-41 4-40 (467)
488 3orq_A N5-carboxyaminoimidazol 88.8 0.56 1.9E-05 45.1 6.1 35 5-42 12-46 (377)
489 3ojo_A CAP5O; rossmann fold, c 88.8 2.7 9.4E-05 41.0 11.0 103 190-318 11-134 (431)
490 3ado_A Lambda-crystallin; L-gu 88.8 0.4 1.4E-05 44.9 4.7 34 5-41 6-39 (319)
491 1ez4_A Lactate dehydrogenase; 88.7 0.51 1.8E-05 44.2 5.5 38 2-40 2-39 (318)
492 3ego_A Probable 2-dehydropanto 88.7 0.93 3.2E-05 42.2 7.3 72 192-286 4-75 (307)
493 1ks9_A KPA reductase;, 2-dehyd 88.7 0.42 1.4E-05 43.8 4.9 32 7-41 2-33 (291)
494 3gg2_A Sugar dehydrogenase, UD 88.7 0.4 1.4E-05 47.4 4.9 33 6-41 3-35 (450)
495 1l7d_A Nicotinamide nucleotide 88.6 0.45 1.5E-05 45.9 5.2 34 5-41 172-205 (384)
496 3enk_A UDP-glucose 4-epimerase 88.5 0.49 1.7E-05 44.5 5.3 38 1-41 1-39 (341)
497 4at0_A 3-ketosteroid-delta4-5a 88.3 0.46 1.6E-05 47.8 5.2 34 192-225 43-76 (510)
498 4ezb_A Uncharacterized conserv 88.3 0.24 8.3E-06 46.5 3.0 34 5-41 24-58 (317)
499 3q2o_A Phosphoribosylaminoimid 88.1 0.65 2.2E-05 44.8 6.0 36 4-42 13-48 (389)
500 3doj_A AT3G25530, dehydrogenas 88.1 0.51 1.7E-05 44.0 5.1 34 5-41 21-54 (310)
No 1
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=2e-55 Score=441.10 Aligned_cols=401 Identities=30% Similarity=0.489 Sum_probs=344.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHH
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (461)
+++||||||||+||++||.+|++.|+ +.+|+|+|+++..+|.++++++.++...... . .......+++.
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~-~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~--~--------~~~~~~~~~~~ 76 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGF-EGRVLVIGREPEIPYERPPLSKEYLAREKTF--E--------RICIRPAQFWE 76 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTC-CSCEEEEESSSSCCBCSGGGGTTTTTTSSCS--G--------GGBSSCHHHHH
T ss_pred CCCcEEEECChHHHHHHHHHHHccCc-CCCEEEEecCCCCCcCcccCCHHHHcCCCCH--H--------HhccCCHHHHH
Confidence 46899999999999999999999986 4579999999999999888876665432111 0 11235678889
Q ss_pred HcCcEEEcCCeEEEEeCCCCEEEcCCCcEEecCEEEEccCCCccccccccccccCccccccccCCcccccccccCCCCCC
Q 012545 84 EKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVEG 163 (461)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g 163 (461)
+.+++++.++++..++...+.+.+.+++.+.||+||+|||++|..|+ ++|
T Consensus 77 ~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~------------------------------i~g 126 (415)
T 3lxd_A 77 DKAVEMKLGAEVVSLDPAAHTVKLGDGSAIEYGKLIWATGGDPRRLS------------------------------CVG 126 (415)
T ss_dssp HTTEEEEETCCEEEEETTTTEEEETTSCEEEEEEEEECCCEECCCCB------------------------------TTS
T ss_pred HCCcEEEeCCEEEEEECCCCEEEECCCCEEEeeEEEEccCCccCCCC------------------------------CCC
Confidence 99999999999999999999999999999999999999999994333 455
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHHHHH
Q 012545 164 ADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYA 243 (461)
Q Consensus 164 ~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~ 243 (461)
.+..+++++++.+++..+.+.+.. .+++++|||+|++|+|+|..+.+.|.+|+++++.+++++..+++++.+.+.+.++
T Consensus 127 ~~~~~v~~~~~~~d~~~l~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~ 205 (415)
T 3lxd_A 127 ADLAGVHAVRTKEDADRLMAELDA-GAKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARVAGEALSEFYQAEHR 205 (415)
T ss_dssp SCCBTEECCCSHHHHHHHHHHHHT-TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHH
T ss_pred ccccCEEEEcCHHHHHHHHHHhhh-cCCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhhcCHHHHHHHHHHHH
Confidence 566778999999999998887752 2789999999999999999999999999999999999987789999999999999
Q ss_pred hcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChhhhhc-ccccCCCcEEeCCCCCCCCCCEEEe
Q 012545 244 NKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETDDFFKTSADDVYAV 322 (461)
Q Consensus 244 ~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~~~~~-~~~~~~g~i~vd~~~~t~~~~vya~ 322 (461)
+.||+++++++|+++.. +++.+..|++++|++++||.||+|+|++|++++++. ++..++ +|.||+++||+.|+|||+
T Consensus 206 ~~GV~i~~~~~v~~i~~-~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~-gi~vd~~~~t~~~~iyA~ 283 (415)
T 3lxd_A 206 AHGVDLRTGAAMDCIEG-DGTKVTGVRMQDGSVIPADIVIVGIGIVPCVGALISAGASGGN-GVDVDEFCRTSLTDVYAI 283 (415)
T ss_dssp HTTCEEEETCCEEEEEE-SSSBEEEEEESSSCEEECSEEEECSCCEESCHHHHHTTCCCSS-SEECCTTCBCSSTTEEEC
T ss_pred hCCCEEEECCEEEEEEe-cCCcEEEEEeCCCCEEEcCEEEECCCCccChHHHHhCCCCcCC-CEEECCCCCcCCCCEEEE
Confidence 99999999999999987 456777899999999999999999999999988754 455564 599999999999999999
Q ss_pred CcccccCcccc-CcceeeccHHHHHHHHHHHHHHHhcccCCCcccCCCCCCeEEEecCCcceEEccCCCC--cEEEecCC
Q 012545 323 GDVATFPMKLY-REMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVG--DTVLFGDN 399 (461)
Q Consensus 323 GD~~~~~~~~~-~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~--~~~~~~~~ 399 (461)
|||+..+...+ |...++++|..|..||+.||+||++.. ..|..+|++|+..+++.++.+|...+ +.+..++.
T Consensus 284 GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~-----~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~~~~~~ 358 (415)
T 3lxd_A 284 GDCAAHANDFADGAVIRLESVQNANDMATAAAKDICGAP-----VPYKATPWFWSNQYDLKLQTVGLSTGHDNAVLRGDP 358 (415)
T ss_dssp GGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHTTCC-----CCCCCCCEEEEEETTEEEEEEECCTTCSEEEEEEEG
T ss_pred EeeeeecCcccCCcceeechHHHHHHHHHHHHHHhcCCC-----CCCCCCCeeEeeeCCcEEEEEeCCCCCCEEEEEecC
Confidence 99999887666 777788999999999999999999764 56888999999999999999997764 33444443
Q ss_pred ccccCCCcEEEEEEeCCEEEEEEEecCCHHHHHHHHHHHHcCCCCCChhhhhccCCCccc
Q 012545 400 DLASATHKFGTYWIKDGKVVGVFLESGTPEENKAIAKVARVQPSVESLDVLKNEGLSFAS 459 (461)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~i~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 459 (461)
. ...|.++|+++|+|+|+.++| .+.+...+..+|..+.++ +.+.|.++++++.+
T Consensus 359 ~----~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~~ 412 (415)
T 3lxd_A 359 A----TRSFSVVYLKGGKVVALDCVN-MVKDYVQGKKLVEARAQI-APEQLADAGVPLKE 412 (415)
T ss_dssp G----GTEEEEEEEETTEEEEEEEES-CHHHHHHHHHHHHHTCCC-CHHHHTCTTSCGGG
T ss_pred C----CCeEEEEEEECCEEEEEEEEC-ChHHHHHHHHHHHCCCCC-CHHHhcCCCCChHH
Confidence 3 457999999999999999997 677788899999999988 67899999998754
No 2
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=4.8e-55 Score=437.23 Aligned_cols=395 Identities=25% Similarity=0.395 Sum_probs=338.1
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHHc
Q 012545 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 85 (461)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (461)
+||||||||+||++||.+|++.|+ +.+|+|+|+++..+|.++++++.++....... .. ....+++++.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~-~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~----------~~-~~~~~~~~~~ 70 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGF-EGRISLIGDEPHLPYDRPSLSKAVLDGSLERP----------PI-LAEADWYGEA 70 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CSEEEEEECSSSSSBCSGGGGTHHHHTSSSSC----------CB-SSCTTHHHHT
T ss_pred CCEEEEcccHHHHHHHHHHHccCc-CCeEEEEECCCCCCcCCccccHHHhCCCCCHH----------Hh-cCCHHHHHHC
Confidence 499999999999999999999986 56799999999999999888876554321111 01 2456788899
Q ss_pred CcEEEcCCeEEEEeCCCCEEEcCCCcEEecCEEEEccCCCccccccccccccCccccccccCCcccccccccCCCCCCCC
Q 012545 86 GIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVEGAD 165 (461)
Q Consensus 86 ~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~ 165 (461)
+++++.+++++.++...+.+.+.+++++.||+||+|||++|..|+ +||.+
T Consensus 71 ~i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~~~------------------------------ipG~~ 120 (410)
T 3ef6_A 71 RIDMLTGPEVTALDVQTRTISLDDGTTLSADAIVIATGSRARTMA------------------------------LPGSQ 120 (410)
T ss_dssp TCEEEESCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCCC------------------------------CTTTT
T ss_pred CCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEccCCcccCCC------------------------------CCCcc
Confidence 999999999999999999999999989999999999999994433 45555
Q ss_pred CCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHHHHHhc
Q 012545 166 AKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANK 245 (461)
Q Consensus 166 ~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~ 245 (461)
.++++++++.+++..+++.+. .+++++|||+|++|+|+|..+.+.|.+|+++++.+++++..+++++.+.+.+.+++.
T Consensus 121 ~~~v~~~~~~~d~~~l~~~~~--~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~ 198 (410)
T 3ef6_A 121 LPGVVTLRTYGDVQVLRDSWT--SATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRVLGRRIGAWLRGLLTEL 198 (410)
T ss_dssp STTEECCCSHHHHHHHHHHCC--TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHHHCHHHHHHHHHHHHHH
T ss_pred ccceEEeccHHHHHHHHHHhc--cCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhhcCHHHHHHHHHHHHHC
Confidence 678999999999999887664 578999999999999999999999999999999999988768999999999999999
Q ss_pred CcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChhhhhc-ccccCCCcEEeCCCCCCCCCCEEEeCc
Q 012545 246 GIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETDDFFKTSADDVYAVGD 324 (461)
Q Consensus 246 GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~~~~~-~~~~~~g~i~vd~~~~t~~~~vya~GD 324 (461)
||+++++++|++++. ++.+..|++++|+++++|.||+|+|++|+.++++. ++..+ ++|.||+++||+.|+|||+||
T Consensus 199 GV~i~~~~~v~~i~~--~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~gi~vd~~~~t~~~~IyA~GD 275 (410)
T 3ef6_A 199 GVQVELGTGVVGFSG--EGQLEQVMASDGRSFVADSALICVGAEPADQLARQAGLACD-RGVIVDHCGATLAKGVFAVGD 275 (410)
T ss_dssp TCEEECSCCEEEEEC--SSSCCEEEETTSCEEECSEEEECSCEEECCHHHHHTTCCBS-SSEECCTTSBCSSTTEEECGG
T ss_pred CCEEEeCCEEEEEec--cCcEEEEEECCCCEEEcCEEEEeeCCeecHHHHHhCCCccC-CeEEEccCeeECCCCEEEEEc
Confidence 999999999999986 44556899999999999999999999999987754 45556 559999999999999999999
Q ss_pred ccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCcccCCCCCCeEEEecCCcceEEccCCCC--cEEEecCCccc
Q 012545 325 VATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVG--DTVLFGDNDLA 402 (461)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~ 402 (461)
|+..+... +...+++++..|..||+.||.||++.. ..|..+|++|+..+++.+..+|...+ +.+..++..
T Consensus 276 ~a~~~~~~-g~~~~~~~~~~A~~qg~~aa~~i~g~~-----~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~-- 347 (410)
T 3ef6_A 276 VASWPLRA-GGRRSLETYMNAQRQAAAVAAAILGKN-----VSAPQLPVSWTEIAGHRMQMAGDIEGPGDFVSRGMPG-- 347 (410)
T ss_dssp GEEEEBTT-SSEECCCCHHHHHHHHHHHHHHHTTCC-----CCCCBCCEEEEEETTEEEEEESCSSSSSEEEEESCTT--
T ss_pred ceeccCCC-CCeeeechHHHHHHHHHHHHHHHcCCC-----CCCCCCCeeEEEECCceEEEEcCCCCCCEEEEEeeCC--
Confidence 99987654 666677899999999999999999764 56888999999999999999997764 344555533
Q ss_pred cCCCcEEEEEEeCCEEEEEEEecCCHHHHHHHHHHHHcCCCCCChhhhhccCCCccc
Q 012545 403 SATHKFGTYWIKDGKVVGVFLESGTPEENKAIAKVARVQPSVESLDVLKNEGLSFAS 459 (461)
Q Consensus 403 ~~~~~~~~~~~~~~~i~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 459 (461)
...|.++++++|+|+|++++| .+.+...+..+|..+.++ +.+.|.++++++.+
T Consensus 348 --~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~i~~~~~~-~~~~l~~~~~~l~~ 400 (410)
T 3ef6_A 348 --SGAALLFRLQERRIQAVVAVD-APRDFALATRLVEARAAI-EPARLADLSNSMRD 400 (410)
T ss_dssp --SSSEEEEEEETTEEEEEEEES-CHHHHHHHHHHHHHTCBC-CHHHHHCTTSCGGG
T ss_pred --CCeEEEEEEECCEEEEEEEEC-ChHHHHHHHHHHhCCCCC-CHHHhcCCCCCHHH
Confidence 456889999999999999998 577788899999999988 66899999998764
No 3
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.9e-54 Score=432.39 Aligned_cols=397 Identities=29% Similarity=0.459 Sum_probs=341.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
++||||||||+||++||.+|++.|+ +.+|+|||+++..+|.++++++.++....... .......+++.+
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~-~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~----------~~~~~~~~~~~~ 69 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKY-PGRIALINDEKHLPYQRPPLSKAYLKSGGDPN----------SLMFRPEKFFQD 69 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC-CSCEEEECCSSSSSBCSGGGGTGGGGSCCCTT----------SSBSSCHHHHHH
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCc-CCCEEEEeCCCCCCCCCccCCHHHHCCCCCHH----------HccCCCHHHHHh
Confidence 3689999999999999999999987 34599999999999999888876654332111 112456788999
Q ss_pred cCcEEEcCCeEEEEeCCCCEEEcCCCcEEecCEEEEccCCCccccccccccccCccccccccCCcccccccccCCCCCCC
Q 012545 85 KGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVEGA 164 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~ 164 (461)
.+++++. ++++.++.+.+.+.+.+++++.||+||+|||++|..| + +||.
T Consensus 70 ~~i~~~~-~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~~---------------------------~---i~g~ 118 (404)
T 3fg2_P 70 QAIELIS-DRMVSIDREGRKLLLASGTAIEYGHLVLATGARNRML---------------------------D---VPNA 118 (404)
T ss_dssp TTEEEEC-CCEEEEETTTTEEEESSSCEEECSEEEECCCEEECCC---------------------------C---STTT
T ss_pred CCCEEEE-EEEEEEECCCCEEEECCCCEEECCEEEEeeCCCccCC---------------------------C---CCCC
Confidence 9999999 7999999999999999999999999999999998433 2 4555
Q ss_pred CCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHHHHHh
Q 012545 165 DAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYAN 244 (461)
Q Consensus 165 ~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~ 244 (461)
+..+++++++..++..+.+.+. .+++++|+|+|++|+|+|..+.+.|.+|+++++.+++++..+++++.+.+.+.+++
T Consensus 119 ~~~~v~~~~~~~d~~~l~~~~~--~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~ 196 (404)
T 3fg2_P 119 SLPDVLYLRTLDESEVLRQRMP--DKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARVVTPEISSYFHDRHSG 196 (404)
T ss_dssp TSTTEECCSSHHHHHHHHHHGG--GCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHH
T ss_pred CCCcEEEECCHHHHHHHHHHhh--cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhccCHHHHHHHHHHHHh
Confidence 6678999999999999888775 47899999999999999999999999999999999999877899999999999999
Q ss_pred cCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChhhhhc-ccccCCCcEEeCCCCCCCCCCEEEeC
Q 012545 245 KGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETDDFFKTSADDVYAVG 323 (461)
Q Consensus 245 ~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~~~~~-~~~~~~g~i~vd~~~~t~~~~vya~G 323 (461)
.||+++++++|+++.. +++.+..|++++|++++||.||+|+|++|+.++++. ++..++| |.||+++||+.|+|||+|
T Consensus 197 ~GV~i~~~~~v~~i~~-~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~G-i~vd~~~~t~~~~iya~G 274 (404)
T 3fg2_P 197 AGIRMHYGVRATEIAA-EGDRVTGVVLSDGNTLPCDLVVVGVGVIPNVEIAAAAGLPTAAG-IIVDQQLLTSDPHISAIG 274 (404)
T ss_dssp TTCEEECSCCEEEEEE-ETTEEEEEEETTSCEEECSEEEECCCEEECCHHHHHTTCCBSSS-EEECTTSBCSSTTEEECG
T ss_pred CCcEEEECCEEEEEEe-cCCcEEEEEeCCCCEEEcCEEEECcCCccCHHHHHhCCCCCCCC-EEECCCcccCCCCEEEee
Confidence 9999999999999987 356677899999999999999999999999988754 5655654 999999999999999999
Q ss_pred cccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCcccCCCCCCeEEEecCCcceEEccCCCC--cEEEecCCcc
Q 012545 324 DVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVG--DTVLFGDNDL 401 (461)
Q Consensus 324 D~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~ 401 (461)
||+..+...+|...+++++..|..||+.||.||++.. ..|..+|++|+..+++.++.+|...+ +.+..++..
T Consensus 275 D~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~-----~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~- 348 (404)
T 3fg2_P 275 DCALFESVRFGETMRVESVQNATDQARCVAARLTGDA-----KPYDGYPWFWSDQGDDKLQIVGLTAGFDQVVIRGSVA- 348 (404)
T ss_dssp GGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTTTCC-----CCCCCCCEEEEEETTEEEEEEECCTTCCEEEEEEETT-
T ss_pred cceeecCccCCceeeehHHHHHHHHHHHHHHHhCCCC-----CCCCCCCceEeEECCcEEEEEeCCCCCCEEEEEecCC-
Confidence 9999887767777778899999999999999999764 56888999999999999998897653 344444433
Q ss_pred ccCCCcEEEEEEeCCEEEEEEEecCCHHHHHHHHHHHHcCCCCCChhhhhccCCCcc
Q 012545 402 ASATHKFGTYWIKDGKVVGVFLESGTPEENKAIAKVARVQPSVESLDVLKNEGLSFA 458 (461)
Q Consensus 402 ~~~~~~~~~~~~~~~~i~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 458 (461)
...|.++|+++|+|+|+.++| .+.+...+..+|..+.++ +.+.|.++++++.
T Consensus 349 ---~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~ 400 (404)
T 3fg2_P 349 ---ERSFSAFCYKAGKLIGIESVN-RAADHVFGRKILPLDKSV-TPEQAADLSFDLK 400 (404)
T ss_dssp ---TTEEEEEEEETTEEEEEEEES-CHHHHHHHHHHTTTTCCC-CHHHHHCTTSCHH
T ss_pred ---CCcEEEEEEECCEEEEEEEeC-CHHHHHHHHHHHHcCCCC-CHHHhcCCCCChH
Confidence 567999999999999999997 668888899999999988 6789999998865
No 4
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=1.1e-52 Score=422.45 Aligned_cols=400 Identities=25% Similarity=0.414 Sum_probs=329.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHH
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (461)
+.+||||||||+||++||..|++.|+ +.+|+|+|+++..+|.++.+++.++..... .. .......++++
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~-~~~V~lie~~~~~~~~~~~l~~~~~~~~~~--~~--------~~~~~~~~~~~ 71 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGW-EGNIRLVGDATVIPHHLPPLSKAYLAGKAT--AE--------SLYLRTPDAYA 71 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTC-CSEEEEECSCCSCCBCSGGGGTTTTTTCSC--SG--------GGBSSCHHHHH
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCc-CCCEEEEECCCCCCCcCCCCcHHHhCCCCC--hH--------HhcccCHHHHH
Confidence 46899999999999999999999986 345999999988888888777655532211 00 01124567888
Q ss_pred HcCcEEEcCCeEEEEeCCCCEEEcCCCcEEecCEEEEccCCCccccccccccccCccccccccCCcccccccccCCCCCC
Q 012545 84 EKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVEG 163 (461)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g 163 (461)
+.+++++.+++|+.++.+.+.|.+.+++++.||+||+|||++|.+|++||.
T Consensus 72 ~~gv~~~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~p~~~~i~G~----------------------------- 122 (431)
T 1q1r_A 72 AQNIQLLGGTQVTAINRDRQQVILSDGRALDYDRLVLATGGRPRPLPVASG----------------------------- 122 (431)
T ss_dssp HTTEEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCCGGGTT-----------------------------
T ss_pred hCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEcCCCCccCCCCCCc-----------------------------
Confidence 999999999999999998889999888889999999999999966555543
Q ss_pred CCCCC---EEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHH
Q 012545 164 ADAKN---IFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEG 240 (461)
Q Consensus 164 ~~~~~---v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~ 240 (461)
+..+ ++++++.+++.++.+.+. .+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++..+++++.+.+.+
T Consensus 123 -~~~~~~~v~~~~~~~d~~~l~~~l~--~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~~l~~ 199 (431)
T 1q1r_A 123 -AVGKANNFRYLRTLEDAECIRRQLI--ADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEH 199 (431)
T ss_dssp -HHHHSTTEEESSSHHHHHHHHHTCC--TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHH
T ss_pred -ccCCCceEEEECCHHHHHHHHHHhh--cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccchhhHHHHHHHHH
Confidence 2223 888899999888876654 4789999999999999999999999999999999999887789999999999
Q ss_pred HHHhcCcEEEcCCcEEEEEec-CCCCEEEEEeCCCcEEecCEEEEccCCCCChhhhhc-ccccCCCcEEeCCCCCCCCCC
Q 012545 241 YYANKGIKIIKGTVAVGFTTN-ADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETDDFFKTSADD 318 (461)
Q Consensus 241 ~l~~~GV~v~~~~~v~~i~~~-~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~~~~~-~~~~~~g~i~vd~~~~t~~~~ 318 (461)
.+++.||+++++++|++++.. +++.+..|++++|+++++|.||+|+|++|++++++. ++..++ +|.||+++||+.|+
T Consensus 200 ~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~~-gi~Vd~~~~ts~~~ 278 (431)
T 1q1r_A 200 LHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPNCELASAAGLQVDN-GIVINEHMQTSDPL 278 (431)
T ss_dssp HHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEECCHHHHHTTCCBSS-SEECCTTSBCSSTT
T ss_pred HHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCcCcchhhccCCCCCC-CEEECCCcccCCCC
Confidence 999999999999999999862 345666889999999999999999999999987754 455554 59999999999999
Q ss_pred EEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCcccCCCCCCeEEEecCCcceEEccCCCC--cEEEe
Q 012545 319 VYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVG--DTVLF 396 (461)
Q Consensus 319 vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~--~~~~~ 396 (461)
|||+|||+..+.+.++...+++++..|..||+.||.||++.. ..|..+|++|+..+++.+..+|...+ +.+..
T Consensus 279 IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~-----~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~~~ 353 (431)
T 1q1r_A 279 IMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCGKV-----PRDEAAPWFWSDQYEIGLKMVGLSEGYDRIIVR 353 (431)
T ss_dssp EEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHTTCC-----CCCCCCCEEEEEETTEEEEEEECCTTCSEEEEE
T ss_pred EEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhcCCC-----CCCCCCCeEEEEECCceEEEEeCCCCCCEEEEE
Confidence 999999999877666666677899999999999999999754 45778999999999988888887653 23333
Q ss_pred cCCccccCCCcEEEEEEeCCEEEEEEEecCCHHHHHHHHHHHHcCCCCCChhhhhccCCCcc
Q 012545 397 GDNDLASATHKFGTYWIKDGKVVGVFLESGTPEENKAIAKVARVQPSVESLDVLKNEGLSFA 458 (461)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~i~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 458 (461)
++.. ...|.+++.++|+|+|++++|.. .+...+..+|..+.++ +.+.|.++.+++.
T Consensus 354 ~~~~----~~~~~~~~~~~~~l~G~~~~g~~-~~~~~~~~~i~~~~~~-~~~~l~~~~~~~~ 409 (431)
T 1q1r_A 354 GSLA----QPDFSVFYLQGDRVLAVDTVNRP-VEFNQSKQIITDRLPV-EPNLLGDESVPLK 409 (431)
T ss_dssp EETT----TTEEEEEEEETTEEEEEEEESCH-HHHHHHHHHHHTTCCC-CHHHHTCTTSCHH
T ss_pred ccCC----CCeEEEEEEeCCEEEEEEEECCh-HHHHHHHHHHHCCCCC-CHHHhhCCCCCHH
Confidence 3321 44678888899999999999855 5566677888888888 6678888887764
No 5
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=2.8e-53 Score=427.24 Aligned_cols=401 Identities=18% Similarity=0.229 Sum_probs=314.6
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHHc
Q 012545 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 85 (461)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (461)
.+|||||||+||++||..|+++|. +.+|+|||+++..+|.+|+++..+......... .......+++++.
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~-~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~---------~~~~~~~~~~~~~ 70 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDK-ESDIIIFEKDRDMSFANCALPYVIGEVVEDRRY---------ALAYTPEKFYDRK 70 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCS-SSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGG---------TBCCCHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCC-CCcEEEEeCCCCCCCCcchhHHHHcCCccchhh---------hhhcCHHHHHHhc
Confidence 479999999999999999999885 466999999998888888775432111100000 0112345678889
Q ss_pred CcEEEcCCeEEEEeCCCCEEEcCC-----CcEEecCEEEEccCCCccccccccccccCccccccccCCcccccccccCCC
Q 012545 86 GIELILSTEIVRADIASKTLLSAT-----GLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFG 160 (461)
Q Consensus 86 ~v~~~~~~~v~~i~~~~~~v~~~~-----~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~ 160 (461)
+++++.+++|+.++.+.+.+.+.+ +.++.||+||||||++|.+|.
T Consensus 71 ~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~~p~------------------------------ 120 (437)
T 4eqs_A 71 QITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLG------------------------------ 120 (437)
T ss_dssp CCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEEECCCC------------------------------
T ss_pred CCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCcccccc------------------------------
Confidence 999999999999999998876532 236899999999999984322
Q ss_pred CCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHH
Q 012545 161 VEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEG 240 (461)
Q Consensus 161 ~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~ 240 (461)
++ ..+++.+++.+++..+.+.+....+++++|+|+|++|+|+|..++++|.+||++++.+++++. +++++.+.+.+
T Consensus 121 i~---g~~~~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~-~d~~~~~~~~~ 196 (437)
T 4eqs_A 121 FE---SDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL-MDADMNQPILD 196 (437)
T ss_dssp CC---CTTEECCSSHHHHHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTT-SCGGGGHHHHH
T ss_pred cc---CceEEeeccHHHHHHHHHhhhccCCcEEEEECCccchhhhHHHHHhcCCcceeeeeecccccc-ccchhHHHHHH
Confidence 33 356788899999999988887767899999999999999999999999999999999999987 79999999999
Q ss_pred HHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChhhhhc-cccc-CCCcEEeCCCCCCCCCC
Q 012545 241 YYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKG-QVAE-NKGGIETDDFFKTSADD 318 (461)
Q Consensus 241 ~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~~~~~-~~~~-~~g~i~vd~~~~t~~~~ 318 (461)
.++++||+++++++|++++. ..+.+++|+++++|.|++|+|++||+++++. ++.. .+|+|.||+++|||+||
T Consensus 197 ~l~~~gV~i~~~~~v~~~~~------~~v~~~~g~~~~~D~vl~a~G~~Pn~~~~~~~gl~~~~~G~I~vd~~~~Ts~p~ 270 (437)
T 4eqs_A 197 ELDKREIPYRLNEEINAING------NEITFKSGKVEHYDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPN 270 (437)
T ss_dssp HHHHTTCCEEESCCEEEEET------TEEEETTSCEEECSEEEECCCEEESCGGGTTSSCCCCTTSCEECCTTCBCSSTT
T ss_pred HhhccceEEEeccEEEEecC------CeeeecCCeEEeeeeEEEEeceecCcHHHHhhhhhhccCCcEecCCCccCCCCC
Confidence 99999999999999999864 2578899999999999999999999998854 5665 67899999999999999
Q ss_pred EEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCcccCCCCCCeEEEecCCcceEEccCCCCc------
Q 012545 319 VYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVGD------ 392 (461)
Q Consensus 319 vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~------ 392 (461)
|||+|||++.++...+...+.+.+..|.+||+++|+||++.... ....+...|.+ .+.+..+..+|.++.+
T Consensus 271 IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g~~~~-~~~~~~~~~~~--~~~~p~ia~vGlte~~a~~~~~ 347 (437)
T 4eqs_A 271 IYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAGNDTI-EFKGFLGNNIV--KFFDYTFASVGVKPNELKQFDY 347 (437)
T ss_dssp EEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHHSCTTC-CCCCBCCCEEE--EETTEEEEEEESCGGGGGGSCE
T ss_pred EEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHcCCCCc-ccccceeEEee--eeccceEEEeeCCHHHHHhCCc
Confidence 99999999998887777777889999999999999999986421 11233334443 3445555666766522
Q ss_pred E---EEecCCccc--cCCCcEEEEEE--eCCEEEEEEEecCC-HHH-HHHHHHHHHcCCCCCChhhhhc-cCCCccc
Q 012545 393 T---VLFGDNDLA--SATHKFGTYWI--KDGKVVGVFLESGT-PEE-NKAIAKVARVQPSVESLDVLKN-EGLSFAS 459 (461)
Q Consensus 393 ~---~~~~~~~~~--~~~~~~~~~~~--~~~~i~G~~~~g~~-~~~-~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~ 459 (461)
. +........ ..+++|.|+++ ++++|||+|++|++ ++| ++.++.+|++++|++||..+.- +.++|.+
T Consensus 348 ~~~~~~~~~~~~~~~~~~~g~~Kli~d~~~~~ilGa~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~~~yhP~~s~ 424 (437)
T 4eqs_A 348 KMVEVTQGAHANYYPGNSPLHLRVYYDTSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFEVAFAPPYSH 424 (437)
T ss_dssp EEEEEEEESSCTTSSSCCEEEEEEEEETTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBGGGGGGCCCCCCTTTCC
T ss_pred eEEEEecCCchhhcCCCCcEEEEEEEECCCCEEEEEEEECcCCHHHHHHHHHHHHHcCCcHHHHhcCccccCCCCCc
Confidence 1 122221111 23567888887 57999999999975 766 6899999999999998765532 2455554
No 6
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=1.3e-52 Score=419.29 Aligned_cols=392 Identities=26% Similarity=0.430 Sum_probs=320.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHH
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (461)
+.+||+|||||+||++||..|++.|. +.+|+|+|+++..+|.++.+++.++.......+ ... +++
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~-~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~-~~~ 70 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGY-QGLITVVGDEAERPYDRPPLSKDFMAHGDAEKI-------------RLD-CKR 70 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTC-CSCEEEEESSCSCCBCSGGGGTHHHHHCCGGGS-------------BCC-CTT
T ss_pred CCCcEEEECChHHHHHHHHHHHccCC-CCeEEEEECCCCCcccCCCCCHHHhCCCchhhh-------------hHH-HHH
Confidence 36899999999999999999999986 345999999998888887776555432110000 111 456
Q ss_pred HcCcEEEcCCeEEEEeCCCCEEEcCCCcEEecCEEEEccCCCccccccccccccCccccccccCCcccccccccCCCC-C
Q 012545 84 EKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGV-E 162 (461)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~ 162 (461)
+.+++++.+++|+.++.+.+.|.+.+++++.||+||+|||++|..|+ + +
T Consensus 71 ~~~v~~~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~~~~~~------------------------------i~~ 120 (408)
T 2gqw_A 71 APEVEWLLGVTAQSFDPQAHTVALSDGRTLPYGTLVLATGAAPRALP------------------------------TLQ 120 (408)
T ss_dssp SCSCEEEETCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCCG------------------------------GGT
T ss_pred HCCCEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCCCCC------------------------------ccC
Confidence 78999999988999999889999988888999999999999984332 4 5
Q ss_pred CCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHHHH
Q 012545 163 GADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYY 242 (461)
Q Consensus 163 g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l 242 (461)
|.+ ++++++++.+++.++.+.+. .+++++|||+|++|+|+|..|++.|.+|+++++.+++++..+++++.+.+.+.+
T Consensus 121 G~~-~~v~~~~~~~~~~~l~~~~~--~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l 197 (408)
T 2gqw_A 121 GAT-MPVHTLRTLEDARRIQAGLR--PQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYH 197 (408)
T ss_dssp TCS-SCEEECCSHHHHHHHHTTCC--TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHH
T ss_pred CCC-CcEEEECCHHHHHHHHHHhh--cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHHH
Confidence 555 67889999999988866553 478999999999999999999999999999999999998668999999999999
Q ss_pred HhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChhhhh-cccccCCCcEEeCCCCCCCCCCEEE
Q 012545 243 ANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFK-GQVAENKGGIETDDFFKTSADDVYA 321 (461)
Q Consensus 243 ~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~~~~-~~~~~~~g~i~vd~~~~t~~~~vya 321 (461)
++.||+++++++|++++ ++ .|++++|+++++|.||+|+|++|++++++ .++..++| |.||+++||+.|+|||
T Consensus 198 ~~~GV~i~~~~~v~~i~---~~---~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~gl~~~~g-i~Vd~~~~t~~~~IyA 270 (408)
T 2gqw_A 198 AAQGVDLRFERSVTGSV---DG---VVLLDDGTRIAADMVVVGIGVLANDALARAAGLACDDG-IFVDAYGRTTCPDVYA 270 (408)
T ss_dssp HHTTCEEEESCCEEEEE---TT---EEEETTSCEEECSEEEECSCEEECCHHHHHHTCCBSSS-EECCTTCBCSSTTEEE
T ss_pred HHcCcEEEeCCEEEEEE---CC---EEEECCCCEEEcCEEEECcCCCccHHHHHhCCCCCCCC-EEECCCCccCCCCEEE
Confidence 99999999999999997 23 57888999999999999999999998775 34655654 9999999999999999
Q ss_pred eCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCcccCCCCCCeEEEecCCcceEEccCCC-CcEEEecCCc
Q 012545 322 VGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV-GDTVLFGDND 400 (461)
Q Consensus 322 ~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~-~~~~~~~~~~ 400 (461)
+|||+..+...+|...+++++..|..||+.||.||.+... ..|..+|++|+..++..+..+|... .+.+..++..
T Consensus 271 ~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~----~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~~~~~~ 346 (408)
T 2gqw_A 271 LGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPTA----PGYAELPWYWSDQGALRIQVAGLASGDEEIVRGEVS 346 (408)
T ss_dssp CGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHCTTS----CCCCCCCEEEEEETTEEEEEEECSCCSEEEEESCCC
T ss_pred EEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcCCCC----CcCCCCCeEEEEECCceEEEECCCCCCEEEEEccCC
Confidence 9999998765556555667899999999999999997541 2678899999999999888888721 2233333311
Q ss_pred cccCCCcEEEEEEeCCEEEEEEEecCCHHHHHHHHHHHHcCCCCCChhhhhccCCCcc
Q 012545 401 LASATHKFGTYWIKDGKVVGVFLESGTPEENKAIAKVARVQPSVESLDVLKNEGLSFA 458 (461)
Q Consensus 401 ~~~~~~~~~~~~~~~~~i~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 458 (461)
.....|.+++.++|+|+|++++|.. .++..+..+|+.+.++ +...|.++.+++.
T Consensus 347 --~~~~~~~~~~~~~~~l~G~~~~g~~-~~~~~~~~~i~~~~~~-~~~~l~~~~~~~~ 400 (408)
T 2gqw_A 347 --LDAPKFTLIELQKGRIVGATCVNNA-RDFAPLRRLLAVGAKP-DRAALADPATDLR 400 (408)
T ss_dssp --SSSCCEEEEEEETTEEEEEEEESCH-HHHHHHHHHHHTTCCC-CHHHHHCTTCCHH
T ss_pred --CCCCeEEEEEEeCCEEEEEEEECCh-HHHHHHHHHHHCCCCC-ChHHhcCCCCCHH
Confidence 1134688888899999999999854 5678899999999988 5568888887764
No 7
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=1.9e-52 Score=413.88 Aligned_cols=363 Identities=26% Similarity=0.356 Sum_probs=304.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHH
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (461)
++.+|||||||+||++||..|.+.+.+ |+|||+++..+|.+|.+++.+........ ......++++
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~---itlie~~~~~~y~~~~l~~~l~g~~~~~~-----------l~~~~~~~~~ 73 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDD---ITMINSEKYLPYYRPRLNEIIAKNKSIDD-----------ILIKKNDWYE 73 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSC---EEEECSSSSCCBCGGGHHHHHHSCCCGGG-----------TBSSCHHHHH
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCE---EEEEECCCCCCcccChhhHHHcCCCCHHH-----------ccCCCHHHHH
Confidence 478999999999999999999554444 99999999999998888764432211111 1246788999
Q ss_pred HcCcEEEcCCeEEEEeCCCCEEEcCCCcEEecCEEEEccCCCccccccccccccCccccccccCCcccccccccCCCCCC
Q 012545 84 EKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVEG 163 (461)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g 163 (461)
+.+++++.+++|+.++++.+.|.+.+++++.||+||+|||++|.+|+ +||
T Consensus 74 ~~~i~~~~~~~V~~id~~~~~v~~~~g~~~~yd~lvlAtG~~p~~p~------------------------------i~G 123 (385)
T 3klj_A 74 KNNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIANKIK------------------------------VPH 123 (385)
T ss_dssp HTTCEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCCC------------------------------CTT
T ss_pred HCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEecCCCcCCCC------------------------------CCC
Confidence 99999999999999999999999999999999999999999994433 455
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHHHHH
Q 012545 164 ADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYA 243 (461)
Q Consensus 164 ~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~ 243 (461)
.+ +++++++++++.++++.+.. +++++|||+|++|+|+|..|++.|.+|+++++.+++++..+++++.+.+.+.++
T Consensus 124 ~~--~v~~~~~~~d~~~l~~~l~~--~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~ 199 (385)
T 3klj_A 124 AD--EIFSLYSYDDALKIKDECKN--KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLD 199 (385)
T ss_dssp CS--CEECCSSHHHHHHHHHHHHH--HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHH
T ss_pred CC--CeEEeCCHHHHHHHHHHhhc--CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHH
Confidence 44 78999999999999887763 689999999999999999999999999999999999998789999999999999
Q ss_pred hcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChhhhhc-ccccCCCcEEeCCCCCCCCCCEEEe
Q 012545 244 NKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETDDFFKTSADDVYAV 322 (461)
Q Consensus 244 ~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~~~~~-~~~~~~g~i~vd~~~~t~~~~vya~ 322 (461)
+.||++++++.++++ |+++++|.||+|+|++|++++++. ++..++ +|.||+++||+.|+|||+
T Consensus 200 ~~gV~~~~~~~v~~i---------------g~~~~~D~vv~a~G~~p~~~~~~~~gl~~~~-gi~vd~~~~t~~~~IyA~ 263 (385)
T 3klj_A 200 RLGIKIYTNSNFEEM---------------GDLIRSSCVITAVGVKPNLDFIKDTEIASKR-GILVNDHMETSIKDIYAC 263 (385)
T ss_dssp TTTCEEECSCCGGGC---------------HHHHHHSEEEECCCEEECCGGGTTSCCCBSS-SEEECTTCBCSSTTEEEC
T ss_pred hCCCEEEeCCEEEEc---------------CeEEecCeEEECcCcccChhhhhhcCCCcCC-CEEECCCcccCCCCEEEE
Confidence 999999999887765 567899999999999999988754 455554 499999999999999999
Q ss_pred CcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCcccCCCC-CCeEEEecCCcceEEccCCCCc---EEEecC
Q 012545 323 GDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDY-LPYFYSRAFDLSWQFYGDNVGD---TVLFGD 398 (461)
Q Consensus 323 GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~g~~~~~---~~~~~~ 398 (461)
|||+..+... .+++..|..||+.||.||++.. ..|.. .|++|++.++..+..+|..+++ .+.. +
T Consensus 264 GD~a~~~~~~------~~~~~~A~~qg~~aa~~i~g~~-----~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~-~ 331 (385)
T 3klj_A 264 GDVAEFYGKN------PGLINIANKQGEVAGLNACGED-----ASYSEIIPSPILKVSGISIISCGDIENNKPSKVFR-S 331 (385)
T ss_dssp GGGEEETTBC------CCCHHHHHHHHHHHHHHHTTCC-----CCCCCCCCCCEEEETTEEEEEESCCTTCCCSEEEE-E
T ss_pred EeeEecCCCc------ccHHHHHHHHHHHHHHHhcCCC-----cCCCCCCCcEEEEeCCCcEEEEcCCCCCCCeEEEE-E
Confidence 9999865431 2679999999999999999864 34554 6999999999999999987643 2322 2
Q ss_pred CccccCCCcEEEEEEeCCEEEEEEEecCCHHHHHHHHHHHHcCCCCCCh
Q 012545 399 NDLASATHKFGTYWIKDGKVVGVFLESGTPEENKAIAKVARVQPSVESL 447 (461)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~i~G~~~~g~~~~~~~~~~~~~~~~~~~~~~ 447 (461)
. ....|.++++++|+|+|++++|+.+ ....+..+|.++.+++++
T Consensus 332 ~----~~~~~~~~~~~~~~l~g~~~~g~~~-~~~~~~~~i~~~~~~~~~ 375 (385)
T 3klj_A 332 T----QEDKYIVCMLKENKIDAAAVIGDVS-LGTKLKKAIDSSKSFDNI 375 (385)
T ss_dssp E----CSSCEEEEEEETTEEEEEEEESCHH-HHHHHHHHHHTTCBCSCC
T ss_pred C----CCCeEEEEEEECCEEEEEEEECCcH-HHHHHHHHHHcCCCcccc
Confidence 2 2567999999999999999998554 445789999999999886
No 8
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=5.7e-51 Score=412.98 Aligned_cols=405 Identities=17% Similarity=0.210 Sum_probs=306.2
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHHc
Q 012545 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 85 (461)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (461)
+||+|||||+||++||.+|++.+ +..+|+|||+++..+|..+.+... +... .... ........+++++.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~-~g~~V~vie~~~~~g~~~~~~~~~-~~~~-~~~~--------~~~~~~~~~~~~~~ 71 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKY-PQAEISLIDKQATVGYLSGGLSAY-FNHT-INEL--------HEARYITEEELRRQ 71 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC-SSSEEEEECSSSCCSSCCC--------------------------CCCCHHHHHHT
T ss_pred CCEEEECCCHHHHHHHHHHHhhC-cCCcEEEEECCCCCcccCccchhh-hcCC-CCCH--------HHhhcCCHHHHHHC
Confidence 69999999999999999999982 123499999998877664433211 1100 0000 01123467888899
Q ss_pred CcEEEcCCeEEEEeCCCCEEEc---CCCcEEecCEEEEccCCCccccccccccccCccccccccCCcccccccccCCCCC
Q 012545 86 GIELILSTEIVRADIASKTLLS---ATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVE 162 (461)
Q Consensus 86 ~v~~~~~~~v~~i~~~~~~v~~---~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 162 (461)
+++++.+++|+.++.+.+.+.+ .+++++.||++|+|||++|.+|++ +
T Consensus 72 gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~~p~i------------------------------~ 121 (452)
T 3oc4_A 72 KIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGASQFSTQI------------------------------R 121 (452)
T ss_dssp TEEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCCCBCCCCC------------------------------B
T ss_pred CCEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCcccCCCCC------------------------------C
Confidence 9999999999999999988765 355679999999999999955544 4
Q ss_pred CCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHHHH
Q 012545 163 GADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYY 242 (461)
Q Consensus 163 g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l 242 (461)
|.+..++++++++.+...+.+... .+++++|||+|++|+|+|..|.+.|.+|+++++.+++++..+++++.+.+.+.+
T Consensus 122 g~~~~~v~~~~~~~~~~~~~~~~~--~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l 199 (452)
T 3oc4_A 122 GSQTEKLLKYKFLSGALAAVPLLE--NSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKYFDKEMVAEVQKSL 199 (452)
T ss_dssp TTTCTTEEEGGGCC----CCHHHH--TCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTCCHHHHHHHHHHH
T ss_pred CCCCCCEEEeCCHHHHHHHHHHHh--cCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccccCCHHHHHHHHHHH
Confidence 444566777777666665554443 579999999999999999999999999999999999998768999999999999
Q ss_pred HhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChhhhhccccc-CCCcEEeCCCCCCCCCCEEE
Q 012545 243 ANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDFFKTSADDVYA 321 (461)
Q Consensus 243 ~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~~~~~~~~~-~~g~i~vd~~~~t~~~~vya 321 (461)
++.||+++++++|++++. +++.+ .+.+++| ++++|.||+|+|++|++++++..+.. .+|+|.||+++||+.|+|||
T Consensus 200 ~~~GV~i~~~~~v~~i~~-~~~~v-~v~~~~g-~i~aD~Vv~A~G~~p~~~~l~~~~~~~~~g~i~vd~~~~t~~~~IyA 276 (452)
T 3oc4_A 200 EKQAVIFHFEETVLGIEE-TANGI-VLETSEQ-EISCDSGIFALNLHPQLAYLDKKIQRNLDQTIAVDAYLQTSVPNVFA 276 (452)
T ss_dssp HTTTEEEEETCCEEEEEE-CSSCE-EEEESSC-EEEESEEEECSCCBCCCSSCCTTSCBCTTSCBCCCTTCBCSSTTEEE
T ss_pred HHcCCEEEeCCEEEEEEc-cCCeE-EEEECCC-EEEeCEEEECcCCCCChHHHHhhhccCCCCCEEECcCccCCCCCEEE
Confidence 999999999999999986 34444 7888777 89999999999999999988665555 67899999999999999999
Q ss_pred eCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCcccCCCCCCeEEEecCCcceEEccCCCC------cEEE
Q 012545 322 VGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVG------DTVL 395 (461)
Q Consensus 322 ~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~------~~~~ 395 (461)
+|||+..+....+...+.+.+..|..||+.||.||++.... ....+. ...+.+|+..+..+|.++. ..+.
T Consensus 277 ~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~~-~~~~~~---~~~~~~~~~~~a~vG~te~~a~~~g~~~~ 352 (452)
T 3oc4_A 277 IGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLEEKTHR-FIGSLR---TMGTKVGDYYLASTGLTETEGLFFPQTLA 352 (452)
T ss_dssp CGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSSSCCCC-CCCCCC---CEEEEETTEEEEEEECCSGGGGGSSSCEE
T ss_pred EEeeEEeccccCCceeecchHHHHHHHHHHHHHHhcCCCcc-CCCccc---cEEEEEcCeeEEEecCCHHHHHHCCCceE
Confidence 99999987655555555678999999999999999975421 111222 3344556666777787652 2121
Q ss_pred ---e--cCCccccCCCcEEEEEE--eCCEEEEEEEecC-CHHH-HHHHHHHHHcCCCCCChhhh-hccCCCcccC
Q 012545 396 ---F--GDNDLASATHKFGTYWI--KDGKVVGVFLESG-TPEE-NKAIAKVARVQPSVESLDVL-KNEGLSFASK 460 (461)
Q Consensus 396 ---~--~~~~~~~~~~~~~~~~~--~~~~i~G~~~~g~-~~~~-~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~ 460 (461)
+ ........+.+|.|+++ ++++|||+|++|+ ++.+ ++.++.+|+++++++|+..+ .-+.++|.+.
T Consensus 353 ~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~P~~~~~ 427 (452)
T 3oc4_A 353 SIIVRQPAPPLQHGTEILGKLIYDKVTQRVLGAQLCSKNNCLEKINTLALSIQTGQTLTDLLQKDYFYQPSLTNI 427 (452)
T ss_dssp EEEEEEECTTTTCSCEEEEEEEEETTTCBEEEEEEEESSCCTHHHHHHHHHHHTTCBHHHHHTCCCCCCTTTSCS
T ss_pred EEEEecCCccCCCCCeEEEEEEEECCCCEEEEEEEEeCCCHHHHHHHHHHHHHcCCCHHHHHhhHhccCCCCCCc
Confidence 1 11111123567889888 4699999999998 6777 79999999999999988876 4566776653
No 9
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=3.1e-50 Score=411.46 Aligned_cols=420 Identities=17% Similarity=0.233 Sum_probs=317.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
.+||+|||||+||++||..|++.|.+..+|+|||+++...|..+.+.. ++.. ....... ......+++++
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~-~~~~-~~~~~~~--------~~~~~~~~~~~ 104 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMAL-WIGE-QIAGPEG--------LFYSDKEELES 104 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHH-HHTT-SSSCSGG--------GBSCCHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccch-hhcC-ccCCHHH--------hhhcCHHHHHh
Confidence 489999999999999999999987112339999999866554332211 1110 0000100 12245677888
Q ss_pred cCcEEEcCCeEEEEeCCCCEEEcC-C--CcEEecCEEEEccCCCccccccccccccCccccccccCCcccccccccCCCC
Q 012545 85 KGIELILSTEIVRADIASKTLLSA-T--GLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGV 161 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~v~~~-~--~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 161 (461)
.+++++.+++++.++.+.+.+.+. + ++++.||+||+|||++|.+|++||+.. +.. ... +
T Consensus 105 ~gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~--~~~--------------~~~--f 166 (490)
T 2bc0_A 105 LGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPILPPIKGAEI--KEG--------------SLE--F 166 (490)
T ss_dssp TTCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCEEECCCSCBTCCB--CTT--------------CTT--C
T ss_pred CCCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCcCCCCCCCccc--ccc--------------ccc--c
Confidence 999999999999999988888775 4 357999999999999997776666420 000 000 1
Q ss_pred CCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHHH
Q 012545 162 EGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGY 241 (461)
Q Consensus 162 ~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~ 241 (461)
.+. .+++++++++.+...+.+.+....+++++|||+|++|+|+|..|++.|.+|+++++.+++++..+++++.+.+.+.
T Consensus 167 ~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~ 245 (490)
T 2bc0_A 167 EAT-LENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKN 245 (490)
T ss_dssp CBS-STTEEECSSHHHHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHH
T ss_pred ccc-cCCEEEeCCHHHHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhHHHHHHHHHHHHH
Confidence 110 3578999999999888877633468999999999999999999999999999999999999866899999999999
Q ss_pred HHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChhhhhccccc-CCCcEEeCCCCCCCCCCEE
Q 012545 242 YANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDFFKTSADDVY 320 (461)
Q Consensus 242 l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~~~~~~~~~-~~g~i~vd~~~~t~~~~vy 320 (461)
+++.||+++++++|++++. ++.+..+.+ +|+++++|.||+|+|++|++++++..+.. ++|+|.||+++||+.|+||
T Consensus 246 l~~~GV~i~~~~~v~~i~~--~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~~ll~~~l~~~~~G~I~Vd~~~~t~~~~Iy 322 (490)
T 2bc0_A 246 MEEHGIQLAFGETVKEVAG--NGKVEKIIT-DKNEYDVDMVILAVGFRPNTTLGNGKIDLFRNGAFLVNKRQETSIPGVY 322 (490)
T ss_dssp HHTTTCEEEETCCEEEEEC--SSSCCEEEE-SSCEEECSEEEECCCEEECCGGGTTCSCBCTTSCBCCCTTCBCSSTTEE
T ss_pred HHhCCeEEEeCCEEEEEEc--CCcEEEEEE-CCcEEECCEEEECCCCCcChHHHHhhhccCCCCCEEECCCcccCCCCEE
Confidence 9999999999999999986 444444555 67899999999999999999987655555 5788999999999999999
Q ss_pred EeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCcccCCCCCCeEEEecCCcceEEccCCC------CcEE
Q 012545 321 AVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV------GDTV 394 (461)
Q Consensus 321 a~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~------~~~~ 394 (461)
|+|||+..+....+...+++++..|..||+.||.||++.. .......|+++..+++..+..+|.++ |..+
T Consensus 323 A~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~----~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~ 398 (490)
T 2bc0_A 323 AIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACGTD----LEGIGVQGSNGISIYGLHMVSTGLTLEKAKRLGFDA 398 (490)
T ss_dssp ECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHTTCC----CCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCE
T ss_pred EeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhcCCC----CCCCCcccceEEEECCcEeEEeeCCHHHHHHcCCce
Confidence 9999998766555555556789999999999999999743 12223356667777888888888764 2222
Q ss_pred E---ecCCccc-----cCCCcEEEEEE--eCCEEEEEEEecC-CHHH-HHHHHHHHHcCCCCCChhhh-hccCCCcccC
Q 012545 395 L---FGDNDLA-----SATHKFGTYWI--KDGKVVGVFLESG-TPEE-NKAIAKVARVQPSVESLDVL-KNEGLSFASK 460 (461)
Q Consensus 395 ~---~~~~~~~-----~~~~~~~~~~~--~~~~i~G~~~~g~-~~~~-~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~ 460 (461)
. +.+.... ....+|.|+++ ++|+|+|++++|+ ++.+ ++.++.+|+.+++++++..+ .-+.++|.+.
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~ 477 (490)
T 2bc0_A 399 AVTEYTDNQKPEFIEHGNFPVTIKIVYDKDSRRILGAQMAAREDVSMGIHMFSLAIQEGVTIEKLALTDIFFLPHFNKP 477 (490)
T ss_dssp EEEEEEEESSCTTCCSSCCEEEEEEEEETTTCBEEEEEEEESSCCTTHHHHHHHHHHHTCBHHHHHHSCCCCCTTTCCT
T ss_pred EEEEEecCCcccccCCCCceEEEEEEEECCCCEEEEEEEEcCcCHHHHHHHHHHHHHcCCCHHHHhhcceecCCCCCch
Confidence 2 2211111 12346888877 4799999999998 6766 69999999999999888765 4667776653
No 10
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=1.6e-50 Score=412.06 Aligned_cols=413 Identities=23% Similarity=0.269 Sum_probs=297.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCC-CCCCCCceeecCCCCCCCCHhHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEG-TARLPGFHVCVGSGGERLLPEWYK 83 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 83 (461)
++||+|||||+||++||..|++.+ +..+|+|||+++..+|.++.++..+..... ...+..+. .......+++.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~-~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~-----~~~~~~~~~~~ 76 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLD-PEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATP-----YNVVRDPEFFR 76 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHC-TTSEEEEECCC--------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhC-cCCCEEEEECCCcccccccccchhhcCCCCchHHhcccc-----chhccCHHHHh
Confidence 579999999999999999999982 123499999999887776544321110000 00000000 00112233343
Q ss_pred -HcCcEEEcCCeEEEEeCCCCEEEcCC---Cc--EEecCEEEEccCCCccccccccccccCccccccccCCccccccccc
Q 012545 84 -EKGIELILSTEIVRADIASKTLLSAT---GL--IFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLT 157 (461)
Q Consensus 84 -~~~v~~~~~~~v~~i~~~~~~v~~~~---~~--~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~ 157 (461)
+.+++++.+++|+.++.+.+.+.+.+ ++ ++.||++|+|||++|.+|+
T Consensus 77 ~~~gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~--------------------------- 129 (472)
T 3iwa_A 77 INKDVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANRPP--------------------------- 129 (472)
T ss_dssp ----CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCS---------------------------
T ss_pred hhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcCCCC---------------------------
Confidence 58999999999999999998887654 55 7899999999999995444
Q ss_pred CCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHC-CCcEEEEccCCccCCcccCHHHHH
Q 012545 158 DFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKIN-NIDVSMVYPEPWCMPRLFTADIAA 236 (461)
Q Consensus 158 ~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~-g~~Vtli~~~~~~~~~~~~~~~~~ 236 (461)
++|.+.++++++++..++..+.+.+....+++++|+|+|++|+|+|..|.+. |.+|+++++.+++++..+++++.+
T Consensus 130 ---i~G~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~~~~~~~~ 206 (472)
T 3iwa_A 130 ---VEGMDLAGVTPVTNLDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKSLSQ 206 (472)
T ss_dssp ---CTTTTSBTEEECCSHHHHHHHHHHCCTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTTSCHHHHH
T ss_pred ---CCCCCCCCEEEeCCHHHHHHHHHHhhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccccCHHHHH
Confidence 4444456788899999998888777554689999999999999999999999 999999999999998558999999
Q ss_pred HHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChhhhh-ccccc-CCCcEEeCCCCCC
Q 012545 237 FYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFK-GQVAE-NKGGIETDDFFKT 314 (461)
Q Consensus 237 ~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~~~~-~~~~~-~~g~i~vd~~~~t 314 (461)
.+.+.+++.||+++++++|++++. +++.+ .+.+.+|+++++|.||+|+|++|+.++++ .++.. ++|+|.||+++||
T Consensus 207 ~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v-~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~~g~i~vd~~~~t 284 (472)
T 3iwa_A 207 MLRHDLEKNDVVVHTGEKVVRLEG-ENGKV-ARVITDKRTLDADLVILAAGVSPNTQLARDAGLELDPRGAIIVDTRMRT 284 (472)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEE-SSSBE-EEEEESSCEEECSEEEECSCEEECCHHHHHHTCCBCTTCCEECCTTCBC
T ss_pred HHHHHHHhcCCEEEeCCEEEEEEc-cCCeE-EEEEeCCCEEEcCEEEECCCCCcCHHHHHhCCccCCCCCCEEECCCccc
Confidence 999999999999999999999987 34444 47888999999999999999999998774 35665 5789999999999
Q ss_pred CCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCcccCCCCCCeEEEecCCcceEEccCCC----
Q 012545 315 SADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV---- 390 (461)
Q Consensus 315 ~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~---- 390 (461)
+.|+|||+|||+..+....+...+++++..|..||++||+||++... .....+|+++..+++..+..+|.++
T Consensus 285 ~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~----~~~~~~~~~~~~~~~~~~a~vG~~e~~a~ 360 (472)
T 3iwa_A 285 SDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLADGDA----TFPGAVGSWAVKLFEGSASGAGLTVEGAL 360 (472)
T ss_dssp SSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHTTCCC----CCCCBCCCEEEECSSCEEEEEECCHHHHH
T ss_pred CCCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhcCCCc----cCCCCCcceEEEECCceeEEEECCHHHHH
Confidence 99999999999987766556555567888999999999999997542 2234567777888888888888775
Q ss_pred --CcEE---EecCCccc----cCCCcEEEEEE--eCCEEEEEEEecC---CHHH-HHHHHHHHHcCCCCCChhhhhccC-
Q 012545 391 --GDTV---LFGDNDLA----SATHKFGTYWI--KDGKVVGVFLESG---TPEE-NKAIAKVARVQPSVESLDVLKNEG- 454 (461)
Q Consensus 391 --~~~~---~~~~~~~~----~~~~~~~~~~~--~~~~i~G~~~~g~---~~~~-~~~~~~~~~~~~~~~~~~~l~~~~- 454 (461)
|..+ .+.....+ ..+.+|.|+++ ++|+|||+|++|+ .+.+ ++.++.+|++++|++||..+.-+-
T Consensus 361 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~~~~~~~~i~~~~~ai~~~~t~~~l~~~~~~~~ 440 (472)
T 3iwa_A 361 REGYDAVNVHVEQFDRAHFYPEKTIMTLQLVVDRPTRRVLGIQGFSTLGDALTARINAVATMLASKPTVEDISNAEVVYS 440 (472)
T ss_dssp HTTCCEEEEEEEC-----------CEEEEEEEETTTCBEEEEEEEESCHHHHHHHHHHHHHHHTTCCBHHHHHTCCCC--
T ss_pred HcCCceEEEEEecCCccCccCCCceEEEEEEEECCCCEEEEEEEECCCcccHHHHHHHHHHHHHcCCCHHHHhcccccCC
Confidence 2211 22211111 23567888888 5899999999998 3345 799999999999998866554332
Q ss_pred CCccc
Q 012545 455 LSFAS 459 (461)
Q Consensus 455 ~~~~~ 459 (461)
++|.+
T Consensus 441 P~~~~ 445 (472)
T 3iwa_A 441 PPFAS 445 (472)
T ss_dssp -----
T ss_pred CCCCC
Confidence 44443
No 11
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=2.9e-50 Score=407.63 Aligned_cols=405 Identities=20% Similarity=0.243 Sum_probs=306.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHH-
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY- 82 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 82 (461)
+++||+|||||+||++||..|++.+. ..+|+|+|+++...|..+.++..+....... .......+++
T Consensus 2 ~~~~VvIIGgG~aGl~aA~~L~~~~~-~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~-----------~~~~~~~~~~~ 69 (449)
T 3kd9_A 2 SLKKVVIIGGGAAGMSAASRVKRLKP-EWDVKVFEATEWVSHAPCGIPYVVEGLSTPD-----------KLMYYPPEVFI 69 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCT-TSEEEEECSSSCCC-----------------------------------CTHH
T ss_pred CcCcEEEECCcHHHHHHHHHHHHhCc-CCCEEEEECCCccccCCcCCccccCCCCCHH-----------HhhhcCHHHHH
Confidence 35899999999999999999999842 3459999999876654332221110000000 0112233444
Q ss_pred HHcCcEEEcCCeEEEEeCCCCEEEcCCC-cEEecCEEEEccCCCccccccccccccCccccccccCCcccccccccCCCC
Q 012545 83 KEKGIELILSTEIVRADIASKTLLSATG-LIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGV 161 (461)
Q Consensus 83 ~~~~v~~~~~~~v~~i~~~~~~v~~~~~-~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 161 (461)
++.+++++.++++..++.+.+.+.+.++ .++.||+||+|||++|.+|+ +
T Consensus 70 ~~~gi~v~~~~~v~~i~~~~~~v~~~~g~~~~~~d~lviAtG~~p~~p~------------------------------i 119 (449)
T 3kd9_A 70 KKRGIDLHLNAEVIEVDTGYVRVRENGGEKSYEWDYLVFANGASPQVPA------------------------------I 119 (449)
T ss_dssp HHTTCEEETTCEEEEECSSEEEEECSSSEEEEECSEEEECCCEEECCCS------------------------------C
T ss_pred HhcCcEEEecCEEEEEecCCCEEEECCceEEEEcCEEEECCCCCCCCCC------------------------------C
Confidence 6889999999999999988888888777 47999999999999995544 4
Q ss_pred CCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHHH
Q 012545 162 EGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGY 241 (461)
Q Consensus 162 ~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~ 241 (461)
+|.+.+++++.++..++..+.+.+....+++++|||+|++|+|+|..|++.|.+|+++++.+++++..+++++.+.+.+.
T Consensus 120 ~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~ 199 (449)
T 3kd9_A 120 EGVNLKGVFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRSFDKEVTDILEEK 199 (449)
T ss_dssp BTTTSTTEECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHH
T ss_pred CCCCCCCEEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHH
Confidence 44455678888888888888887765567899999999999999999999999999999999999876899999999999
Q ss_pred HHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChhhhhc-cccc-CCCcEEeCCCCCCCCCCE
Q 012545 242 YANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKG-QVAE-NKGGIETDDFFKTSADDV 319 (461)
Q Consensus 242 l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~~~~~-~~~~-~~g~i~vd~~~~t~~~~v 319 (461)
+++. |++++++.+++++. ++.+..+ +.+|+++++|.||+|+|++|++++++. ++.. ++|+|.||+++||+.|+|
T Consensus 200 l~~~-v~i~~~~~v~~i~~--~~~v~~v-~~~g~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~~~G~i~vd~~~~t~~~~I 275 (449)
T 3kd9_A 200 LKKH-VNLRLQEITMKIEG--EERVEKV-VTDAGEYKAELVILATGIKPNIELAKQLGVRIGETGAIWTNEKMQTSVENV 275 (449)
T ss_dssp HTTT-SEEEESCCEEEEEC--SSSCCEE-EETTEEEECSEEEECSCEEECCHHHHHTTCCBCTTSSBCCCTTCBCSSTTE
T ss_pred HHhC-cEEEeCCeEEEEec--cCcEEEE-EeCCCEEECCEEEEeeCCccCHHHHHhCCccCCCCCCEEECCCCccCCCCE
Confidence 9999 99999999999986 3333333 457789999999999999999988754 5666 578899999999999999
Q ss_pred EEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCcccCCCCCCeEEEecCCcceEEccCCC------CcE
Q 012545 320 YAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV------GDT 393 (461)
Q Consensus 320 ya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~------~~~ 393 (461)
||+|||+..+....|...+++++..|..||+.||.||++... ......|+.+..+++..+..+|.++ |..
T Consensus 276 yA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~g~~~----~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~g~~ 351 (449)
T 3kd9_A 276 YAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAGKEL----HFPGVLGTAVTKFMDVEIGKTGLTEMEALKEGYD 351 (449)
T ss_dssp EECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCCC----CCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCC
T ss_pred EEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhcCCCc----cCCCcccceEEEEcCcEEEEecCCHHHHHHCCCc
Confidence 999999987766556555568899999999999999997542 1123345666777777777778764 222
Q ss_pred EEe---cCCccc----cCCCcEEEEEE--eCCEEEEEEEecCCHHH-HHHHHHHHHcCCCCCChhhh-hccCCCcc
Q 012545 394 VLF---GDNDLA----SATHKFGTYWI--KDGKVVGVFLESGTPEE-NKAIAKVARVQPSVESLDVL-KNEGLSFA 458 (461)
Q Consensus 394 ~~~---~~~~~~----~~~~~~~~~~~--~~~~i~G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~l-~~~~~~~~ 458 (461)
+.. .....+ ..+.+|.|+++ ++|+|||+|++|+.+.+ ++.++.+|++++|++||..+ ..+.++|.
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~p~~~ 427 (449)
T 3kd9_A 352 VRTAFIKASTRPHYYPGGREIWLKGVVDNETNRLLGVQVVGSDILPRIDTAAAMLMAGFTTKDAFFTDLAYAPPFA 427 (449)
T ss_dssp EEEEEEEEESSCTTSTTCCEEEEEEEEETTTCBEEEEEEEESSCHHHHHHHHHHHHTTCBHHHHHTCCCCCBTTTB
T ss_pred eEEEEEecCCccccCCCCceEEEEEEEECCCCEEEEEEEEChHHHHHHHHHHHHHHcCCcHHHHhhcccccCCCCC
Confidence 211 111111 23567888888 35999999999999888 68999999999999886655 33444444
No 12
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=1.4e-50 Score=410.23 Aligned_cols=406 Identities=20% Similarity=0.309 Sum_probs=314.1
Q ss_pred CeEEEEcCChHHHHHHHHHHHc--CCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHH
Q 012545 6 FKYVILGGGVSAGYAAREFAKQ--GVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (461)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~L~~~--g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (461)
+||+|||||+||++||..|++. |.+ |+|||+++..+|..+.+.. ++... .... .. ........++++
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~---V~lie~~~~~~~~~~~~~~-~~~g~-~~~~-~~-----~~~~~~~~~~~~ 69 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDAD---VTAYEMNDNISFLSCGIAL-YLGKE-IKNN-DP-----RGLFYSSPEELS 69 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCE---EEEEESSSCCCBCGGGHHH-HHTTC-BGGG-CG-----GGGBSCCHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCc---EEEEECCCCCCcccccchh-hhcCC-cccC-CH-----HHhhhcCHHHHH
Confidence 5899999999999999999998 655 9999999866654332211 11100 0000 00 001234567788
Q ss_pred HcCcEEEcCCeEEEEeCCCCEEEcCC-----CcEEecCEEEEccCCCccccccccccccCccccccccCCcccccccccC
Q 012545 84 EKGIELILSTEIVRADIASKTLLSAT-----GLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTD 158 (461)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~~v~~~~-----~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~ 158 (461)
+.+++++.++++..++.+.+.+.+.+ ++++.||++|+|||++|.+|+
T Consensus 70 ~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~~p~---------------------------- 121 (452)
T 2cdu_A 70 NLGANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPTVPP---------------------------- 121 (452)
T ss_dssp HTTCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEECCCC----------------------------
T ss_pred HcCCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcCCCC----------------------------
Confidence 89999999988999998888887643 467999999999999995443
Q ss_pred CCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHH
Q 012545 159 FGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFY 238 (461)
Q Consensus 159 ~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~ 238 (461)
++|.+.+++++++++.+...+.+.+. .+++++|||+|++|+|+|..|++.|.+|+++++.+++++..+++++.+.+
T Consensus 122 --i~g~~~~~v~~~~~~~~~~~~~~~~~--~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l 197 (452)
T 2cdu_A 122 --IPGIDSSRVYLCKNYNDAKKLFEEAP--KAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKYFDKEFTDIL 197 (452)
T ss_dssp --CTTTTSTTEEECSSHHHHHHHHHHGG--GCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTTSCHHHHHHH
T ss_pred --CCCCCCCCEEEeCcHHHHHHHHHHhc--cCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhhhhhhHHHHH
Confidence 44444567899999999988877664 57999999999999999999999999999999999999866899999999
Q ss_pred HHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChhhhhccccc-CCCcEEeCCCCCCCCC
Q 012545 239 EGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDFFKTSAD 317 (461)
Q Consensus 239 ~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~~~~~~~~~-~~g~i~vd~~~~t~~~ 317 (461)
.+.+++.||+++++++|++++. +++.+..+.+ +|+++++|.||+|+|++|++++++..+.. ++|+|.||+++||+.|
T Consensus 198 ~~~l~~~Gv~i~~~~~v~~i~~-~~~~v~~v~~-~g~~i~~D~vv~a~G~~p~~~ll~~~l~~~~~G~i~Vd~~~~t~~~ 275 (452)
T 2cdu_A 198 AKDYEAHGVNLVLGSKVAAFEE-VDDEIITKTL-DGKEIKSDIAILCIGFRPNTELLKGKVAMLDNGAIITDEYMHSSNR 275 (452)
T ss_dssp HHHHHHTTCEEEESSCEEEEEE-ETTEEEEEET-TSCEEEESEEEECCCEEECCGGGTTTSCBCTTSCBCCCTTSBCSST
T ss_pred HHHHHHCCCEEEcCCeeEEEEc-CCCeEEEEEe-CCCEEECCEEEECcCCCCCHHHHHHhhhcCCCCCEEECCCcCcCCC
Confidence 9999999999999999999986 3455544555 78899999999999999999987655555 5788999999999999
Q ss_pred CEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCcccCCCCCCeEEEecCCcceEEccCCC------C
Q 012545 318 DVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV------G 391 (461)
Q Consensus 318 ~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~------~ 391 (461)
+|||+|||+..+....+...+++++..|..||+.||.||++.. .......|+++..+++..+..+|.++ |
T Consensus 276 ~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~----~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g 351 (452)
T 2cdu_A 276 DIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLTEDK----VKDMGTQSSSGLKLYGRTYVSTGINTALAKANN 351 (452)
T ss_dssp TEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSSSCC----CCCCCBCCCEEEEETTEEEEEEECCHHHHHHTT
T ss_pred CEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhCCCC----CcCCCccceEEEEECCeeeEeecCCHHHHHHcC
Confidence 9999999999876555555556789999999999999998743 12223456677778888888888765 2
Q ss_pred cEE---EecCCccc----cCCCcEEEEEE--eCCEEEEEEEecC-CHHH-HHHHHHHHHcCCCCCChhhh-hccCCCccc
Q 012545 392 DTV---LFGDNDLA----SATHKFGTYWI--KDGKVVGVFLESG-TPEE-NKAIAKVARVQPSVESLDVL-KNEGLSFAS 459 (461)
Q Consensus 392 ~~~---~~~~~~~~----~~~~~~~~~~~--~~~~i~G~~~~g~-~~~~-~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~ 459 (461)
..+ .+.+.... ....+|.|+++ ++|+|+|++++|+ ++.+ ++.++.+|+++++++++..+ .-+.++|.+
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~~~~~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e 431 (452)
T 2cdu_A 352 LKVSEVIIADNYRPEFMLSTDEVLMSLVYDPKTRVILGGALSSMHDVSQSANVLSVCIQNKNTIDDLAMVDMLFQPQFDR 431 (452)
T ss_dssp CCCEEEEEEEESSCTTBSCCCEEEEEEEECTTTCBEEEEEEEESSCCHHHHHHHHHHHHTTCBHHHHHHSCCCCCTTTCC
T ss_pred CceEEEEEecCCccccCCCCceEEEEEEEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHHhhhhhccCCCCCc
Confidence 111 12221111 12346888877 4799999999998 6776 68999999999999888765 456677665
Q ss_pred C
Q 012545 460 K 460 (461)
Q Consensus 460 ~ 460 (461)
.
T Consensus 432 ~ 432 (452)
T 2cdu_A 432 P 432 (452)
T ss_dssp S
T ss_pred h
Confidence 3
No 13
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=3e-49 Score=411.90 Aligned_cols=398 Identities=23% Similarity=0.315 Sum_probs=312.6
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHH-H
Q 012545 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK-E 84 (461)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 84 (461)
+||+|||||+||++||..|++.+. ..+|+|+|+++..+|.++.++..+. ... ... ........+++. +
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~-~~~V~lie~~~~~~~~~~~l~~~~~-~~~-~~~--------~~~~~~~~~~~~~~ 70 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSE-TAEIIMFERGEYVSFANCGLPYHIS-GEI-AQR--------SALVLQTPESFKAR 70 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCS-SSEEEEECSSSCSSBCGGGHHHHHT-SSS-CCG--------GGGBCCCHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhhCc-CCCEEEEECCCCccccccCchHHhc-CCc-CCh--------HHhhccCHHHHHHh
Confidence 489999999999999999999842 3459999999987777554432111 100 000 001123344444 5
Q ss_pred cCcEEEcCCeEEEEeCCCCEEEcCC---Cc--EEecCEEEEccCCCccccccccccccCccccccccCCcccccccccCC
Q 012545 85 KGIELILSTEIVRADIASKTLLSAT---GL--IFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDF 159 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~v~~~~---~~--~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~ 159 (461)
.+++++.+++|+.++.+.+.+.+.+ ++ ++.||+||+|||++|..|+
T Consensus 71 ~~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~----------------------------- 121 (565)
T 3ntd_A 71 FNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIVPP----------------------------- 121 (565)
T ss_dssp HCCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCC-----------------------------
T ss_pred cCcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCCCCCC-----------------------------
Confidence 8999999999999999998877643 43 7899999999999995443
Q ss_pred CCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHH
Q 012545 160 GVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYE 239 (461)
Q Consensus 160 ~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~ 239 (461)
+||.+..++++++++.++..+.+.+....+++++|||+|++|+|+|..|++.|.+|+++++.+++++. +++++.+.+.
T Consensus 122 -ipG~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~ 199 (565)
T 3ntd_A 122 -IPGVDNPLTHSLRNIPDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTP-VDREMAGFAH 199 (565)
T ss_dssp -CTTCCSTTEECCSSHHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTT-SCHHHHHHHH
T ss_pred -CCCCCCCCEEEeCCHHHHHHHHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchh-cCHHHHHHHH
Confidence 45555667888999999988888777667899999999999999999999999999999999999985 8999999999
Q ss_pred HHHHhcCcEEEcCCcEEEEEec------------------CCCCEEEEEeCCCcEEecCEEEEccCCCCChhhhh-cccc
Q 012545 240 GYYANKGIKIIKGTVAVGFTTN------------------ADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFK-GQVA 300 (461)
Q Consensus 240 ~~l~~~GV~v~~~~~v~~i~~~------------------~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~~~~-~~~~ 300 (461)
+.+++.||++++++++++++.+ .++. ..+.+.+|+++++|.||+|+|++|++++++ .++.
T Consensus 200 ~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~g~~ 278 (565)
T 3ntd_A 200 QAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGH-LSLTLSNGELLETDLLIMAIGVRPETQLARDAGLA 278 (565)
T ss_dssp HHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCE-EEEEETTSCEEEESEEEECSCEEECCHHHHHHTCC
T ss_pred HHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCc-EEEEEcCCCEEEcCEEEECcCCccchHHHHhCCcc
Confidence 9999999999999999999862 2333 457788999999999999999999998774 3566
Q ss_pred c-CCCcEEeCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCcccCCCCC-CeEEEec
Q 012545 301 E-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYL-PYFYSRA 378 (461)
Q Consensus 301 ~-~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~-p~~~~~~ 378 (461)
. ++|+|.||+++||+.|+|||+|||+..+....+....++++..|..||+.||+||++.. ..|... |..+..+
T Consensus 279 ~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~-----~~~~~~~~~~~~~~ 353 (565)
T 3ntd_A 279 IGELGGIKVNAMMQTSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFGRE-----ERYQGTQGTAICKV 353 (565)
T ss_dssp BCTTSSBCCCTTCBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCC-----CCCCCBCCCEEEEE
T ss_pred cCCCCCEEECCCcccCCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhcCCC-----ccCCCcccceEEEE
Confidence 5 57899999999999999999999998777666666566789999999999999999764 224433 4455667
Q ss_pred CCcceEEccCCCCc---------EEEecCCccc----cCCCcEEEEEE--eCCEEEEEEEecCCH-HH-HHHHHHHHHcC
Q 012545 379 FDLSWQFYGDNVGD---------TVLFGDNDLA----SATHKFGTYWI--KDGKVVGVFLESGTP-EE-NKAIAKVARVQ 441 (461)
Q Consensus 379 ~~~~~~~~g~~~~~---------~~~~~~~~~~----~~~~~~~~~~~--~~~~i~G~~~~g~~~-~~-~~~~~~~~~~~ 441 (461)
++..+..+|.++.+ ...+.....+ ..+.+|.|+++ ++|+|||+|++|+++ .+ ++.++.+|+++
T Consensus 354 ~~~~~~~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~v~~~~~~~ilG~~~~g~~a~~e~i~~~~~ai~~~ 433 (565)
T 3ntd_A 354 FDLAVGATGKNEKQLKQAGIAFEKVYVHTASHASYYPGAEVVSFKLLFDPVKGTIFGAQAVGKDGIDKRIDVMAVAQRAG 433 (565)
T ss_dssp TTEEEEEEECCHHHHHHTTCCCEEEEEEEESSCTTSTTCCEEEEEEEECTTTCBEEEEEEEESSSHHHHHHHHHHHHHTT
T ss_pred cCcEEEEecCCHHHHHHcCCCeEEEEEecCcccCcCCCCceEEEEEEEECCCCEEEEEEEECCccHHHHHHHHHHHHHcC
Confidence 78888888877521 1222111111 23457888888 689999999999998 66 79999999999
Q ss_pred CCCCChhhhh
Q 012545 442 PSVESLDVLK 451 (461)
Q Consensus 442 ~~~~~~~~l~ 451 (461)
+|++||..+.
T Consensus 434 ~~~~~l~~~~ 443 (565)
T 3ntd_A 434 MTVEQLQHLE 443 (565)
T ss_dssp CBHHHHTTCC
T ss_pred CCHHHHhhhh
Confidence 9998876654
No 14
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=4.9e-49 Score=398.36 Aligned_cols=404 Identities=22% Similarity=0.279 Sum_probs=310.8
Q ss_pred CeEEEEcCChHHHHHHHHHHHc--CCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHH
Q 012545 6 FKYVILGGGVSAGYAAREFAKQ--GVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (461)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~L~~~--g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (461)
+||||||||+||++||..|++. |.+ |+|||+++..+|..+.+.. ++... ..... .......++++
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~---V~lie~~~~~~~~~~~~~~-~~~~~-~~~~~--------~~~~~~~~~~~ 67 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAE---IQWYEKGDFISFLSAGMQL-YLEGK-VKDVN--------SVRYMTGEKME 67 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSE---EEEEESSSSSSBCGGGHHH-HHTTS-SCCGG--------GSBSCCHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCe---EEEEECCCccCcccccchh-hhcCc-cCCHH--------HhhcCCHHHHH
Confidence 4899999999999999999998 554 9999999876654332211 11110 00000 11234567888
Q ss_pred HcCcEEEcCCeEEEEeCCCCEEEcCC---Cc--EEecCEEEEccCCCccccccccccccCccccccccCCcccccccccC
Q 012545 84 EKGIELILSTEIVRADIASKTLLSAT---GL--IFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTD 158 (461)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~~v~~~~---~~--~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~ 158 (461)
+.+++++.+++++.++.+.+.|.+.+ |+ ++.||++|+|||++|..|+
T Consensus 68 ~~gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~---------------------------- 119 (447)
T 1nhp_A 68 SRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELD---------------------------- 119 (447)
T ss_dssp HTTCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCC----------------------------
T ss_pred HCCCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcCCCC----------------------------
Confidence 89999999999999999888887743 54 4899999999999995444
Q ss_pred CCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHH
Q 012545 159 FGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFY 238 (461)
Q Consensus 159 ~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~ 238 (461)
+||.+.++++++++++++.++.+.+....+++++|||+|++|+|+|..|++.|.+|+++++.+.+++..+++++.+.+
T Consensus 120 --i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l 197 (447)
T 1nhp_A 120 --IPGKDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVL 197 (447)
T ss_dssp --STTTTSBSEECCCHHHHHHHHHHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTCCHHHHHHH
T ss_pred --CCCCCCCCeEEECCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccccCCHHHHHHH
Confidence 444445568888889999888877754458999999999999999999999999999999999988866899999999
Q ss_pred HHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChhhhhccccc-CCCcEEeCCCCCCCCC
Q 012545 239 EGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDFFKTSAD 317 (461)
Q Consensus 239 ~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~~~~~~~~~-~~g~i~vd~~~~t~~~ 317 (461)
.+.+++.||+++++++|++++. ++.+..+.+ +++++++|.||+|+|++|+.++++..+.. .+|+|.||+++||+.|
T Consensus 198 ~~~l~~~gv~i~~~~~v~~i~~--~~~v~~v~~-~~~~i~~d~vi~a~G~~p~~~~~~~~~~~~~~G~i~Vd~~~~t~~~ 274 (447)
T 1nhp_A 198 TEEMEANNITIATGETVERYEG--DGRVQKVVT-DKNAYDADLVVVAVGVRPNTAWLKGTLELHPNGLIKTDEYMRTSEP 274 (447)
T ss_dssp HHHHHTTTEEEEESCCEEEEEC--SSBCCEEEE-SSCEEECSEEEECSCEEESCGGGTTTSCBCTTSCBCCCTTCBCSST
T ss_pred HHHHHhCCCEEEcCCEEEEEEc--cCcEEEEEE-CCCEEECCEEEECcCCCCChHHHHhhhhhcCCCcEEECccccCCCC
Confidence 9999999999999999999986 344434555 55789999999999999999887655554 5788999999999999
Q ss_pred CEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCcccCC-CCCCeEEEecCCcceEEccCCC------
Q 012545 318 DVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGY-DYLPYFYSRAFDLSWQFYGDNV------ 390 (461)
Q Consensus 318 ~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~g~~~------ 390 (461)
+|||+|||+..+....+...+++++..|..||+.||.||++.. ..+ ...++.+..+++..+..+|.++
T Consensus 275 ~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~-----~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~ 349 (447)
T 1nhp_A 275 DVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLEEPV-----KPFPGVQGSSGLAVFDYKFASTGINEVMAQKL 349 (447)
T ss_dssp TEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSSSCC-----CCCCCBCCCEEEEETTEEEEEEECCHHHHHHH
T ss_pred CEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhcCCC-----CCCCCccccEEEEECCeeeEEecCCHHHHHHc
Confidence 9999999998765545555456789999999999999998743 222 2345666777777777778664
Q ss_pred CcEE---EecCCccc----cCCCcEEEEEEe--CCEEEEEEEecCC-HHH-HHHHHHHHHcCCCCCChhhh-hccCCCcc
Q 012545 391 GDTV---LFGDNDLA----SATHKFGTYWIK--DGKVVGVFLESGT-PEE-NKAIAKVARVQPSVESLDVL-KNEGLSFA 458 (461)
Q Consensus 391 ~~~~---~~~~~~~~----~~~~~~~~~~~~--~~~i~G~~~~g~~-~~~-~~~~~~~~~~~~~~~~~~~l-~~~~~~~~ 458 (461)
|..+ .+.+.... ....+|.|++++ +|+|+|++++|+. +.+ ++.++.+|+.+++++++..+ .-+.++|.
T Consensus 350 g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~ 429 (447)
T 1nhp_A 350 GKETKAVTVVEDYLMDFNPDKQKAWFKLVYDPETTQILGAQLMSKADLTANINAISLAIQAKMTIEDLAYADFFFQPAFD 429 (447)
T ss_dssp TCCCEEEEEEEESSCTTCTTCCEEEEEEEECTTTCBEEEEEEEESSCCTTHHHHHHHHHHTTCBHHHHHTCCCCCCTTTC
T ss_pred CCceEEEEEEcCCccccCCCCceEEEEEEEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHHhhcceecCCCCC
Confidence 2111 12121111 124467888873 7999999999998 766 68899999999999888765 45677766
Q ss_pred cC
Q 012545 459 SK 460 (461)
Q Consensus 459 ~~ 460 (461)
+.
T Consensus 430 e~ 431 (447)
T 1nhp_A 430 KP 431 (447)
T ss_dssp CS
T ss_pred Cc
Confidence 53
No 15
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=2.5e-48 Score=406.33 Aligned_cols=400 Identities=22% Similarity=0.294 Sum_probs=312.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
++||+|||||+||++||..|++.+ +..+|+|||+++..+|.++.++..+... .... . .........+.++
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~-~g~~V~vie~~~~~~~~~~~lp~~~~g~--~~~~---~----~~~~~~~~~~~~~ 105 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLS-EEDEIIMVERGEYISFANCGLPYYIGGV--ITER---Q----KLLVQTVERMSKR 105 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC-SSSEEEEECSSSCSSBCGGGHHHHHTTS--SCCG---G----GGBSSCHHHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhhC-cCCCEEEEECCCCccccCCCCchhhcCc--CCCh---H----HhhccCHHHHHHh
Confidence 579999999999999999999983 1334999999998777654432211100 0000 0 0011233455568
Q ss_pred cCcEEEcCCeEEEEeCCCCEEEcC---CCc--EEecCEEEEccCCCccccccccccccCccccccccCCcccccccccCC
Q 012545 85 KGIELILSTEIVRADIASKTLLSA---TGL--IFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDF 159 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~v~~~---~~~--~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~ 159 (461)
.+++++.+++|+.++.+.+.+.+. +++ ++.||++|+|||++|.+|++||+.
T Consensus 106 ~gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~------------------------ 161 (588)
T 3ics_A 106 FNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPIVPSIPGIE------------------------ 161 (588)
T ss_dssp TTCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTTT------------------------
T ss_pred cCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCCCCCCCCCCcc------------------------
Confidence 899999999999999999887763 455 689999999999999655444431
Q ss_pred CCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHH
Q 012545 160 GVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYE 239 (461)
Q Consensus 160 ~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~ 239 (461)
+..++++.++..+...+...+....+++++|||+|++|+|+|..|++.|.+|+++++.+++++. +++++.+.+.
T Consensus 162 -----~~~~v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~ 235 (588)
T 3ics_A 162 -----EAKALFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP-IDYEMAAYVH 235 (588)
T ss_dssp -----TCTTEEECSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHHHHHHH
T ss_pred -----cCCCeEEeCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc-CCHHHHHHHH
Confidence 4567899999999998888876557899999999999999999999999999999999999987 8999999999
Q ss_pred HHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChhhhh-ccccc-CCCcEEeCCCCCCCCC
Q 012545 240 GYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFK-GQVAE-NKGGIETDDFFKTSAD 317 (461)
Q Consensus 240 ~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~~~~-~~~~~-~~g~i~vd~~~~t~~~ 317 (461)
+.+++.||+++++++|++++.+ ++ .|.+.+|+++++|.||+|+|++|++++++ .++.. ++|+|.||+++||+.|
T Consensus 236 ~~l~~~GV~i~~~~~v~~i~~~-~~---~v~~~~g~~i~~D~Vi~a~G~~p~~~~l~~~g~~~~~~g~i~vd~~~~t~~~ 311 (588)
T 3ics_A 236 EHMKNHDVELVFEDGVDALEEN-GA---VVRLKSGSVIQTDMLILAIGVQPESSLAKGAGLALGVRGTIKVNEKFQTSDP 311 (588)
T ss_dssp HHHHHTTCEEECSCCEEEEEGG-GT---EEEETTSCEEECSEEEECSCEEECCHHHHHTTCCBCGGGCBCCCTTSBCSST
T ss_pred HHHHHcCCEEEECCeEEEEecC-CC---EEEECCCCEEEcCEEEEccCCCCChHHHHhcCceEcCCCCEEECCccccCCC
Confidence 9999999999999999999863 22 47889999999999999999999998774 45665 5789999999999999
Q ss_pred CEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhc-ccCCCcccCCCCCCeEEEecCCcceEEccCCC------
Q 012545 318 DVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMA-TEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV------ 390 (461)
Q Consensus 318 ~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~------ 390 (461)
+|||+|||+..+....|.....+.+..|..||+.||+||++ .. ......+|..+..+++..+..+|.++
T Consensus 312 ~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~----~~~~~~~~~~~~~~~~~~~a~vGlte~~a~~~ 387 (588)
T 3ics_A 312 HIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHGHTD----SLYKGTLGTSVAKVFDLTVATTGLNEKILKRL 387 (588)
T ss_dssp TEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCCS----SCCCCBCCCEEEEETTEEEEEEECCHHHHHHT
T ss_pred CEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhcCCCc----cccCCcccceEEEECCeEEEEecCCHHHHHHc
Confidence 99999999987765556555567899999999999999997 32 12234566666666777777788765
Q ss_pred CcEE---EecCCcc----ccCCCcEEEEEE--eCCEEEEEEEecCC-HHH-HHHHHHHHHcCCCCCChhhhhc
Q 012545 391 GDTV---LFGDNDL----ASATHKFGTYWI--KDGKVVGVFLESGT-PEE-NKAIAKVARVQPSVESLDVLKN 452 (461)
Q Consensus 391 ~~~~---~~~~~~~----~~~~~~~~~~~~--~~~~i~G~~~~g~~-~~~-~~~~~~~~~~~~~~~~~~~l~~ 452 (461)
|..+ .+..... ...+.+|+|+++ ++|+|||+|++|+. +++ ++.++.+|++++|++||..+.-
T Consensus 388 g~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~~~~~~ilG~~~~g~~~~~e~i~~~~~ai~~~~t~~~l~~~~~ 460 (588)
T 3ics_A 388 NIPYEVVHVQANSHAGYYPNATPVLIKLIFNKDSGKIYGAQTLGRDGVDKRMDVIATAIKANLTVLDLPDLEL 460 (588)
T ss_dssp TCCCEEEEEEEESSCTTSTTCCEEEEEEEECTTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBTTTGGGCCC
T ss_pred CCCeEEEEEecCCccccCCCCceEEEEEEEECCCCeEEEEEEEcCCcHHHHHHHHHHHHHcCCCHHHhhhhhh
Confidence 2211 1111111 123467888888 58999999999974 666 7999999999999999776543
No 16
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=5.2e-48 Score=393.93 Aligned_cols=404 Identities=21% Similarity=0.299 Sum_probs=308.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHc--CCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQ--GVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY 82 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~--g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (461)
++||+|||||+||++||..|++. |.+ |+|||+++..+|.++.++. ++... ..... .......+++
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~---V~lie~~~~~~~~~~~~~~-~~~~~-~~~~~--------~l~~~~~~~~ 102 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENAN---VVTLEKGEIYSYAQCGLPY-VISGA-IASTE--------KLIARNVKTF 102 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCE---EEEECSSSCCSBCGGGHHH-HHTTS-SSCGG--------GGBSSCHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCc---EEEEECCCCCCCCCCCcch-hhcCC-cCCHH--------HhhhcCHHHH
Confidence 36999999999999999999997 544 9999999876666543321 11110 00000 0112345556
Q ss_pred -HHcCcEEEcCCeEEEEeCCCCEEEcCC---Cc--EEecCEEEEccCCCccccccccccccCccccccccCCcccccccc
Q 012545 83 -KEKGIELILSTEIVRADIASKTLLSAT---GL--IFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRL 156 (461)
Q Consensus 83 -~~~~v~~~~~~~v~~i~~~~~~v~~~~---~~--~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~ 156 (461)
+..+++++.+++++.++.+.+.+.+.+ |+ ++.||++|+|||++|.+|++
T Consensus 103 ~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i------------------------- 157 (480)
T 3cgb_A 103 RDKYGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVMPEW------------------------- 157 (480)
T ss_dssp HHTTCCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCC-------------------------
T ss_pred HhhcCCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCcccCCCC-------------------------
Confidence 445999999989999999888877643 65 79999999999999955444
Q ss_pred cCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHH
Q 012545 157 TDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAA 236 (461)
Q Consensus 157 ~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~ 236 (461)
+|.+.++++++++.+++.++.+.+....+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+
T Consensus 158 -----~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~ 231 (480)
T 3cgb_A 158 -----EGRDLQGVHLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTI-YDGDMAE 231 (480)
T ss_dssp -----BTTTSBTEECCSSHHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSS-SCHHHHH
T ss_pred -----CCccCCCEEEeCCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhc-CCHHHHH
Confidence 4444456888899999998888776556899999999999999999999999999999999998885 7999999
Q ss_pred HHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChhhhhc-cccc-CCCcEEeCCCCCC
Q 012545 237 FYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKG-QVAE-NKGGIETDDFFKT 314 (461)
Q Consensus 237 ~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~~~~~-~~~~-~~g~i~vd~~~~t 314 (461)
.+.+.+++.||+++++++|+++.. ++.+..+.+++ .++++|.||+|+|++|+.++++. ++.. .+|+|.||+++||
T Consensus 232 ~l~~~l~~~Gv~i~~~~~v~~i~~--~~~v~~v~~~~-~~i~~D~vi~a~G~~p~~~~l~~~g~~~~~~G~I~Vd~~~~t 308 (480)
T 3cgb_A 232 YIYKEADKHHIEILTNENVKAFKG--NERVEAVETDK-GTYKADLVLVSVGVKPNTDFLEGTNIRTNHKGAIEVNAYMQT 308 (480)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEE--SSBEEEEEETT-EEEECSEEEECSCEEESCGGGTTSCCCBCTTSCBCCCTTSBC
T ss_pred HHHHHHHHcCcEEEcCCEEEEEEc--CCcEEEEEECC-CEEEcCEEEECcCCCcChHHHHhCCcccCCCCCEEECCCccC
Confidence 999999999999999999999987 45555566654 58999999999999999987754 4555 5789999999999
Q ss_pred CCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCcccCCC-CCCeEEEecCCcceEEccCCCC--
Q 012545 315 SADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYD-YLPYFYSRAFDLSWQFYGDNVG-- 391 (461)
Q Consensus 315 ~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~g~~~~-- 391 (461)
+.|+|||+|||+..+....+...+++++..|..||+.||.||++.. ..|. ..++.+..+++..+..+|.++.
T Consensus 309 s~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~-----~~~~~~~~~~~~~~~~~~~~~vG~~~~~a 383 (480)
T 3cgb_A 309 NVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNMLDKR-----RAFKGTLGTGIIKFMNLTLARTGLNEKEA 383 (480)
T ss_dssp SSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCC-----CCCCCBCCCEEEEETTEEEEEEECCHHHH
T ss_pred CCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhcCCC-----ccCCCccceeEEEECCcEEEEeCCCHHHH
Confidence 9999999999998765544554455789999999999999999743 2232 2234456667777777786642
Q ss_pred ----cEE---EecCCccc----cCCCcEEEEEE--eCCEEEEEEEecCC-HHH-HHHHHHHHHcCCCCCChhhh-hccCC
Q 012545 392 ----DTV---LFGDNDLA----SATHKFGTYWI--KDGKVVGVFLESGT-PEE-NKAIAKVARVQPSVESLDVL-KNEGL 455 (461)
Q Consensus 392 ----~~~---~~~~~~~~----~~~~~~~~~~~--~~~~i~G~~~~g~~-~~~-~~~~~~~~~~~~~~~~~~~l-~~~~~ 455 (461)
..+ .+...... ....+|.|+++ ++|+|+|++++|+. +.+ ++.++.+|+++++++++..+ .-+.+
T Consensus 384 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~vg~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~~P 463 (480)
T 3cgb_A 384 KGLHIPYKTVKVDSTNMAGYYPNAKPLYLKLLYRSDTKQLLGGQVIGEEGVDKRIDVIAMALFNKMSIHDLEDVDLSYAP 463 (480)
T ss_dssp HHTTCCEEEEEEEEESSCTTSTTCCEEEEEEEEETTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBGGGGGGCCCCCCT
T ss_pred HHcCCceEEEEEecCCcccccCCCceEEEEEEEECCCCEEEEEEEECCccHHHHHHHHHHHHHcCCCHHHHhhcccccCC
Confidence 111 11111111 12446888887 47999999999998 777 68999999999999998765 34666
Q ss_pred CcccC
Q 012545 456 SFASK 460 (461)
Q Consensus 456 ~~~~~ 460 (461)
+|.+.
T Consensus 464 t~~e~ 468 (480)
T 3cgb_A 464 PYNSV 468 (480)
T ss_dssp TTCCS
T ss_pred CCCCc
Confidence 76653
No 17
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=6.6e-48 Score=382.51 Aligned_cols=370 Identities=21% Similarity=0.296 Sum_probs=286.6
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCC-CCHh
Q 012545 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGER-LLPE 80 (461)
Q Consensus 2 m~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 80 (461)
|+..+||+|||||+||++||..|++.|. +.+|+|+|+++...|.++.++..+....... .... ....
T Consensus 1 M~~~~dvvIIG~G~aGl~aA~~l~~~g~-~~~V~lie~~~g~~~~~~~l~~~~~~~~~~~-----------~~~~~~~~~ 68 (384)
T 2v3a_A 1 MSERAPLVIIGTGLAGYNLAREWRKLDG-ETPLLMITADDGRSYSKPMLSTGFSKNKDAD-----------GLAMAEPGA 68 (384)
T ss_dssp ---CCCEEEECCSHHHHHHHHHHHTTCS-SSCEEEECSSCCCEECGGGGGGTTTTTCCHH-----------HHEEECHHH
T ss_pred CCCCCcEEEECChHHHHHHHHHHHhhCC-CCCEEEEECCCCCccCcccccHHHhCCCCHH-----------HhhccCHHH
Confidence 3456899999999999999999999885 3459999999766666554443221110000 0011 2355
Q ss_pred HHHHcCcEEEcCCeEEEEeCCCCEEEcCCCcEEecCEEEEccCCCccccccccccccCccccccccCCcccccccccCCC
Q 012545 81 WYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFG 160 (461)
Q Consensus 81 ~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~ 160 (461)
++++.+++++.++++..++.+.+.+.+.++ ++.||++|+|||++|.+|+
T Consensus 69 ~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~-~~~~d~lviAtG~~p~~p~------------------------------ 117 (384)
T 2v3a_A 69 MAEQLNARILTHTRVTGIDPGHQRIWIGEE-EVRYRDLVLAWGAEPIRVP------------------------------ 117 (384)
T ss_dssp HHHHTTCEEECSCCCCEEEGGGTEEEETTE-EEECSEEEECCCEEECCCC------------------------------
T ss_pred HHHhCCcEEEeCCEEEEEECCCCEEEECCc-EEECCEEEEeCCCCcCCCC------------------------------
Confidence 667889999998889999988888888654 6999999999999995443
Q ss_pred CCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHH
Q 012545 161 VEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEG 240 (461)
Q Consensus 161 ~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~ 240 (461)
++|.+.+++++++++.++..+.+.+. .+++++|+|+|++|+|+|..|.+.|.+|+++++.+++++..+++++.+.+.+
T Consensus 118 i~g~~~~~v~~~~~~~~~~~~~~~~~--~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~ 195 (384)
T 2v3a_A 118 VEGDAQDALYPINDLEDYARFRQAAA--GKRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQA 195 (384)
T ss_dssp CBSTTTTCEEECSSHHHHHHHHHHHT--TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHH
T ss_pred CCCcCcCCEEEECCHHHHHHHHHhhc--cCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcccCHHHHHHHHH
Confidence 44444467899999999988877775 4799999999999999999999999999999999999887669999999999
Q ss_pred HHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChhhhh-cccccCCCcEEeCCCCCCCCCCE
Q 012545 241 YYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFK-GQVAENKGGIETDDFFKTSADDV 319 (461)
Q Consensus 241 ~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~~~~-~~~~~~~g~i~vd~~~~t~~~~v 319 (461)
.+++.||+++++++|++++.+++ ...+++.+|+++++|.||+|+|++|+.++++ .++..++| |.||+++||+.|+|
T Consensus 196 ~l~~~gv~i~~~~~v~~i~~~~~--~~~v~~~~g~~i~~d~vv~a~G~~p~~~l~~~~g~~~~~g-i~vd~~~~t~~~~I 272 (384)
T 2v3a_A 196 GLEGLGVRFHLGPVLASLKKAGE--GLEAHLSDGEVIPCDLVVSAVGLRPRTELAFAAGLAVNRG-IVVDRSLRTSHANI 272 (384)
T ss_dssp HHHTTTCEEEESCCEEEEEEETT--EEEEEETTSCEEEESEEEECSCEEECCHHHHHTTCCBSSS-EEECTTCBCSSTTE
T ss_pred HHHHcCCEEEeCCEEEEEEecCC--EEEEEECCCCEEECCEEEECcCCCcCHHHHHHCCCCCCCC-EEECCCCCCCCCCE
Confidence 99999999999999999987322 3578889999999999999999999998764 45666666 99999999999999
Q ss_pred EEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCcccCCCCCCeEEEecCCcceEEccCCCCc---EEEe
Q 012545 320 YAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVGD---TVLF 396 (461)
Q Consensus 320 ya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~---~~~~ 396 (461)
||+|||+..... ..+++..|..||+.+|+||++.. ....|..+|+.+.+ +++.+...|..... ....
T Consensus 273 yA~GD~~~~~~~------~~~~~~~a~~~g~~~a~~i~g~~---~~~~~~~~p~~~~~-~~~~~~~~g~~~~~~~~~~~~ 342 (384)
T 2v3a_A 273 YALGDCAEVDGL------NLLYVMPLMACARALAQTLAGNP---SQVAYGPMPVTVKT-PACPLVVSPPPRGMDGQWLVE 342 (384)
T ss_dssp EECGGGEEETTB------CCCSHHHHHHHHHHHHHHHTTCC---CCCCCCCCCEEECC-TTSCEEEECCCTTCCCEEEEE
T ss_pred EEeeeeeeECCC------CcchHHHHHHHHHHHHHHhcCCC---ccCCCCCcceEEEE-CCeeEEEecCCCCCCceEEEE
Confidence 999999975322 12578889999999999999753 22456678886654 34556666754321 2222
Q ss_pred cCCccccCCCcEEEEEE-eCCEEEEEEEecCCHHHHHHHH
Q 012545 397 GDNDLASATHKFGTYWI-KDGKVVGVFLESGTPEENKAIA 435 (461)
Q Consensus 397 ~~~~~~~~~~~~~~~~~-~~~~i~G~~~~g~~~~~~~~~~ 435 (461)
++ ..+|.++++ ++|+|+|++++|+.+.|+..+.
T Consensus 343 ~~------~~g~~~~~~~~~~~i~G~~~~g~~a~e~~~~~ 376 (384)
T 2v3a_A 343 GS------GTDLKVLCRDTAGRVIGYALTGAAVNEKLALN 376 (384)
T ss_dssp EE------TTEEEEEEECTTSCEEEEEEEGGGGGGHHHHH
T ss_pred ec------CCcEEEEEEccCCEEEEEEEECcchHHHHHHH
Confidence 22 346777777 4899999999999998854443
No 18
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=5.7e-48 Score=379.91 Aligned_cols=353 Identities=24% Similarity=0.383 Sum_probs=274.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
..|++|||||+||++||..|++.| + |+|||+++..+|.++.+++.+. .. .... .......+++++
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~---V~lie~~~~~~~~~~~l~~~~~-g~--~~~~--------~~~~~~~~~~~~ 72 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-E---VTVIDKEPVPYYSKPMLSHYIA-GF--IPRN--------RLFPYSLDWYRK 72 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-E---EEEECSSSSCCCCSTTHHHHHT-TS--SCGG--------GGCSSCHHHHHH
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-C---EEEEECCCCCccccchhHHHHh-CC--CCHH--------HhccCCHHHHHh
Confidence 369999999999999999999987 5 9999999887787776654321 10 0000 112346778889
Q ss_pred cCcEEEcCCeEEEEeCCCCEEEcCCCcEEecCEEEEccCCCccccccccccccCccccccccCCcccccccccCCCCCCC
Q 012545 85 KGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVEGA 164 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~ 164 (461)
.+++++.+++|+.++++.+.|. .+++++.||+||||||++|.+|+ +||
T Consensus 73 ~~v~~~~g~~v~~id~~~~~V~-~~g~~~~~d~lViATGs~p~~p~------------------------------i~G- 120 (367)
T 1xhc_A 73 RGIEIRLAEEAKLIDRGRKVVI-TEKGEVPYDTLVLATGARAREPQ------------------------------IKG- 120 (367)
T ss_dssp HTEEEECSCCEEEEETTTTEEE-ESSCEEECSEEEECCCEEECCCC------------------------------SBT-
T ss_pred CCcEEEECCEEEEEECCCCEEE-ECCcEEECCEEEECCCCCCCCCC------------------------------CCC-
Confidence 9999999988999999888888 67788999999999999995443 344
Q ss_pred CCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHHHHHh
Q 012545 165 DAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYAN 244 (461)
Q Consensus 165 ~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~ 244 (461)
.++++++++.+++.++++.+. ++++++|||+|++|+|+|..|++.|.+|+++++.+++++ +++++.+.+.+.+++
T Consensus 121 -~~~v~~~~~~~~~~~l~~~~~--~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--~~~~~~~~l~~~l~~ 195 (367)
T 1xhc_A 121 -KEYLLTLRTIFDADRIKESIE--NSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG--LDEELSNMIKDMLEE 195 (367)
T ss_dssp -GGGEECCCSHHHHHHHHHHHH--HHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT--CCHHHHHHHHHHHHH
T ss_pred -cCCEEEEcCHHHHHHHHHHhh--cCCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc--CCHHHHHHHHHHHHH
Confidence 245778888999988877764 258999999999999999999999999999999999888 799999999999999
Q ss_pred cCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChhhhhc-ccccCCCcEEeCCCCCCCCCCEEEeC
Q 012545 245 KGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETDDFFKTSADDVYAVG 323 (461)
Q Consensus 245 ~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~~~~~-~~~~~~g~i~vd~~~~t~~~~vya~G 323 (461)
.||+++++++|++++. + .+++++|+ +++|.||+|+|++|++++++. ++..+ ++|.||+++||+.|+|||+|
T Consensus 196 ~gV~i~~~~~v~~i~~--~----~v~~~~g~-i~~D~vi~a~G~~p~~~ll~~~gl~~~-~gi~Vd~~~~t~~~~IyA~G 267 (367)
T 1xhc_A 196 TGVKFFLNSELLEANE--E----GVLTNSGF-IEGKVKICAIGIVPNVDLARRSGIHTG-RGILIDDNFRTSAKDVYAIG 267 (367)
T ss_dssp TTEEEECSCCEEEECS--S----EEEETTEE-EECSCEEEECCEEECCHHHHHTTCCBS-SSEECCTTSBCSSTTEEECG
T ss_pred CCCEEEcCCEEEEEEe--e----EEEECCCE-EEcCEEEECcCCCcCHHHHHhCCCCCC-CCEEECCCcccCCCCEEEeE
Confidence 9999999999999962 2 47788887 999999999999999987643 45555 45999999999999999999
Q ss_pred cccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCcccCCCCC-CeEEEecCCcceEEccCCCCcEEEecCCccc
Q 012545 324 DVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYL-PYFYSRAFDLSWQFYGDNVGDTVLFGDNDLA 402 (461)
Q Consensus 324 D~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 402 (461)
||+...... .+.+..|..||+.||.||.+.. ..|... |+.+..+++..+..+|.++.+...+
T Consensus 268 D~a~~~~~~------~~~~~~A~~qg~~aa~~i~g~~-----~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~------ 330 (367)
T 1xhc_A 268 DCAEYSGII------AGTAKAAMEQARVLADILKGEP-----RRYNFKFRSTVFKFGKLQIAIIGNTKGEGKWI------ 330 (367)
T ss_dssp GGEEBTTBC------CCSHHHHHHHHHHHHHHHTTCC-----CCCCSSCCEEEEEETTEEEEEEECCSSCEEEE------
T ss_pred eeeecCCCC------ccHHHHHHHHHHHHHHHhcCCC-----ccCCCCCCceEEEECCceEEEECCCCCCCccc------
Confidence 999753221 1578899999999999999753 344443 4434567777888889876543221
Q ss_pred cCCCcEEEEEEeCCEEEEEEEecCCHHHHHHHHHHH
Q 012545 403 SATHKFGTYWIKDGKVVGVFLESGTPEENKAIAKVA 438 (461)
Q Consensus 403 ~~~~~~~~~~~~~~~i~G~~~~g~~~~~~~~~~~~~ 438 (461)
.+|.|+++++|+|+|++++|+.+. ...+..+|
T Consensus 331 ---~~~~k~~~~~~~ilG~~~~g~~~~-~~~~~~~i 362 (367)
T 1xhc_A 331 ---EDNTKVFYENGKIIGAVVFNDIRK-ATKLEKEI 362 (367)
T ss_dssp ---ETTEEEEC-----CEEEEESCHHH-HHHHC---
T ss_pred ---ceEEEEEEECCEEEEEEEECChHH-HHHHHHHH
Confidence 468888888899999999996544 44344433
No 19
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=100.00 E-value=5.5e-48 Score=394.50 Aligned_cols=409 Identities=23% Similarity=0.335 Sum_probs=304.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCC--------CCCCceeec--CC
Q 012545 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTA--------RLPGFHVCV--GS 72 (461)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~--~~ 72 (461)
+..+||||||||+||++||..|++.+. ..+|+|||+++..+|.+|++++.++...... .++...... ..
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~-g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDP-GARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQP 87 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHST-TCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCC-CCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccc
Confidence 346899999999999999999998842 3459999999988999998888776543210 000000000 00
Q ss_pred -CCCCCCHhH--HHHcCcEEEcCCeEEEEeCCCCEEEcCCCcEEecCEEEEccCCCccccccccccccCccccccccCCc
Q 012545 73 -GGERLLPEW--YKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLP 149 (461)
Q Consensus 73 -~~~~~~~~~--~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p 149 (461)
........+ +.+.+++++.+++|+.++.+.++|.+.+|+++.||+||||||++|..|+++|..
T Consensus 88 ~~~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~~V~~~~g~~i~yd~lviATGs~p~~~~~~~~~-------------- 153 (493)
T 1m6i_A 88 PSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPRSLSAIDRA-------------- 153 (493)
T ss_dssp GGGSBCTTTTTTSTTCEEEEEETCCEEEEEGGGTEEEETTSCEEEEEEEEECCCEEECCCHHHHTS--------------
T ss_pred hHhhcchhhhhhhhcCCeEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCCCCCCcccc--------------
Confidence 000000111 135689999999999999988999999998999999999999998433222210
Q ss_pred ccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHH----CCCcEEEEccCCcc
Q 012545 150 LFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKI----NNIDVSMVYPEPWC 225 (461)
Q Consensus 150 ~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~----~g~~Vtli~~~~~~ 225 (461)
......+++.+++.+++..+.+.+. .+++++|||+|++|+|+|..|++ .|.+|+++++.+.+
T Consensus 154 ------------~~~~~~~v~~~~~~~d~~~l~~~~~--~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~ 219 (493)
T 1m6i_A 154 ------------GAEVKSRTTLFRKIGDFRSLEKISR--EVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGN 219 (493)
T ss_dssp ------------CHHHHHTEEECCSHHHHHHHHHHHH--HCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSST
T ss_pred ------------cccccCceEEEcCHHHHHHHHHHhh--cCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccc
Confidence 0000246888899999988887765 47899999999999999999987 47899999998887
Q ss_pred CCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChhhhh-cccccC--
Q 012545 226 MPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFK-GQVAEN-- 302 (461)
Q Consensus 226 ~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~~~~-~~~~~~-- 302 (461)
+.+.+++++.+.+.+.++++||+++++++|++++.+ ++. ..|++.+|++++||.||+|+|++||+++++ .++..+
T Consensus 220 ~~~~l~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~-~~~-~~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~~gl~~~~~ 297 (493)
T 1m6i_A 220 MGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVS-SGK-LLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSD 297 (493)
T ss_dssp TTTTSCHHHHHHHHHHHHTTTCEEECSCCEEEEEEE-TTE-EEEEETTSCEEEESEEEECCCEEECCTTHHHHTCCBCTT
T ss_pred ccccCCHHHHHHHHHHHHhcCCEEEeCCEEEEEEec-CCe-EEEEECCCCEEECCEEEECCCCCccHHHHHHcCCccccC
Confidence 777789999999999999999999999999999862 333 478899999999999999999999998774 356554
Q ss_pred CCcEEeCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCcccCCCCCCeEEEecC-Cc
Q 012545 303 KGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAF-DL 381 (461)
Q Consensus 303 ~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~-~~ 381 (461)
+|+|.||++||| .|+|||+|||+..+....+.. ++++|..|..||+.||.||++.. .+|...|+||+..+ +.
T Consensus 298 ~ggi~Vd~~l~t-~~~IyA~GD~a~~~~~~~g~~-~~~~~~~A~~qg~~aa~ni~g~~-----~~~~~~~~~~s~~~~~~ 370 (493)
T 1m6i_A 298 FGGFRVNAELQA-RSNIWVAGDAACFYDIKLGRR-RVEHHDHAVVSGRLAGENMTGAA-----KPYWHQSMFWSDLGPDV 370 (493)
T ss_dssp TCSEECCTTCEE-ETTEEECGGGEEEEETTTEEE-CCCCHHHHHHHHHHHHHHHTSCC-----CCCCCCCEEEEESSTTC
T ss_pred CCcEEECCCccc-CCCeeEeeeeEeccCcccCcc-ccchHHHHHHHHHHHHHHhcCCC-----CCcCCcCceeeeeccCc
Confidence 589999999998 699999999998765544432 56789999999999999999753 67888999999886 44
Q ss_pred ceEEccCCC------CcEE------------------Eec-------------------CC--cc-ccCCCcEEEEEEeC
Q 012545 382 SWQFYGDNV------GDTV------------------LFG-------------------DN--DL-ASATHKFGTYWIKD 415 (461)
Q Consensus 382 ~~~~~g~~~------~~~~------------------~~~-------------------~~--~~-~~~~~~~~~~~~~~ 415 (461)
.+..+|... |... ..+ +. +. .....+|..+|+++
T Consensus 371 ~~~~~g~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (493)
T 1m6i_A 371 GYEAIGLVDSSLPTVGVFAKATAQDNPKSATEQSGTGIRSESETESEASEITIPPSTPAVPQAPVQGEDYGKGVIFYLRD 450 (493)
T ss_dssp EEEEEECCCTTSCEEEEEECCCTTCSHHHHHHHHSCSCHHHHSCSCCCC--------------------CCEEEEEEEET
T ss_pred ceEEEeccCCCcceEEeecccccccccccccccccccccccccccccccccccccccccccccccccccCCcEEEEEEeC
Confidence 444333210 1000 000 00 00 01123456688899
Q ss_pred CEEEEEEEecCCHHHHHHHHHHHHcCCCCCChhhh
Q 012545 416 GKVVGVFLESGTPEENKAIAKVARVQPSVESLDVL 450 (461)
Q Consensus 416 ~~i~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l 450 (461)
|+|+|+.++| .+..+..+..+|+.+.++.++..+
T Consensus 451 ~~~~g~~~~~-~~~~~~~~~~li~~~~~~~~~~~~ 484 (493)
T 1m6i_A 451 KVVVGIVLWN-IFNRMPIARKIIKDGEQHEDLNEV 484 (493)
T ss_dssp TEEEEEEEES-CCSCHHHHHHHHHHCCBCSCSTTG
T ss_pred CEEEEEEEec-CcchHHHHHHHHhCCCCCCCHHHH
Confidence 9999999997 557788899999999998887654
No 20
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-47 Score=391.07 Aligned_cols=400 Identities=16% Similarity=0.230 Sum_probs=287.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCC-C-CCCc-ccccccCCC----CCCCCCCceeec-----C
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP-Y-ERPA-LSKAYLFPE----GTARLPGFHVCV-----G 71 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~-~-~~~~-~~~~~~~~~----~~~~~~~~~~~~-----~ 71 (461)
+.+||+|||||+||++||..|++.|.+ |+|||+++... + ...| .++.++... .......+.... .
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~---V~liE~~~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 86 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAK---TLLVEAKALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDK 86 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCC---EEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSG
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCc---EEEEeCCCcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCccccccccc
Confidence 468999999999999999999999887 99999985311 0 0011 111111000 000000000000 0
Q ss_pred --CCC----------------CCCCHhHHHHcCcEEEcCCeEEEEeCCCCEEEcCCCc--EEecCEEEEccCCCcccc-c
Q 012545 72 --SGG----------------ERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGL--IFKYQILVIATGSTVSIT-S 130 (461)
Q Consensus 72 --~~~----------------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~--~~~~d~liiAtG~~~~~~-~ 130 (461)
... .......+++.+++++.+ .+..++.....+.+.+++ ++.||+||+|||++|.+| +
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~~ 165 (479)
T 2hqm_A 87 EHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFG-WARFNKDGNVEVQKRDNTTEVYSANHILVATGGKAIFPEN 165 (479)
T ss_dssp GGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEE-EEEECTTSCEEEEESSSCCEEEEEEEEEECCCEEECCCTT
T ss_pred ccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEeeCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCCCC
Confidence 000 001123455689999988 566666544456556665 799999999999999666 5
Q ss_pred cccccccCccccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHH
Q 012545 131 LTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALK 210 (461)
Q Consensus 131 ~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~ 210 (461)
+||+. .+ .+.+++..+ ...+++++|||+|++|+|+|..|.
T Consensus 166 i~g~~--------------------------------~~---~~~~~~~~l-----~~~~~~vvViGgG~ig~E~A~~l~ 205 (479)
T 2hqm_A 166 IPGFE--------------------------------LG---TDSDGFFRL-----EEQPKKVVVVGAGYIGIELAGVFH 205 (479)
T ss_dssp STTGG--------------------------------GS---BCHHHHHHC-----SSCCSEEEEECSSHHHHHHHHHHH
T ss_pred CCCcc--------------------------------cc---cchHHHhcc-----cccCCeEEEECCCHHHHHHHHHHH
Confidence 55531 01 122333222 125789999999999999999999
Q ss_pred HCCCcEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCC-cEEecCEEEEccCCC
Q 012545 211 INNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDG-RTLEADIVVVGVGGR 289 (461)
Q Consensus 211 ~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G-~~i~aD~vi~a~G~~ 289 (461)
+.|.+|+++++.+++++. +++++.+.+.+.|++.||+++++++|++++.++++....+++++| +++++|.||+|+|++
T Consensus 206 ~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~ 284 (479)
T 2hqm_A 206 GLGSETHLVIRGETVLRK-FDECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRK 284 (479)
T ss_dssp HTTCEEEEECSSSSSCTT-SCHHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEE
T ss_pred HcCCceEEEEeCCccccc-cCHHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCC
Confidence 999999999999999986 899999999999999999999999999998744443457888999 889999999999999
Q ss_pred CChhh-hh-ccccc-CCCcEEeCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCC-Ccc
Q 012545 290 PLISL-FK-GQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGG-KTV 365 (461)
Q Consensus 290 p~~~~-~~-~~~~~-~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~-~~~ 365 (461)
||+.+ ++ .++.. ++|+|.||+++||+.|+|||+|||++.+ ..+..|..||+.||.||++.... ...
T Consensus 285 p~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~~~ 354 (479)
T 2hqm_A 285 SHLGMGSENVGIKLNSHDQIIADEYQNTNVPNIYSLGDVVGKV----------ELTPVAIAAGRKLSNRLFGPEKFRNDK 354 (479)
T ss_dssp ECCCSSGGGGTCCBCTTSCBCCCTTCBCSSTTEEECGGGTTSS----------CCHHHHHHHHHHHHHHHHSCGGGTTCC
T ss_pred CccccChhhcCceECCCCCEeECCCCccCCCCEEEEEecCCCc----------ccHHHHHHHHHHHHHHhcCCCccCccc
Confidence 99965 43 45666 5789999999999999999999998754 46788999999999999975310 112
Q ss_pred cCCCCCCeEEEecCCcceEEccCCC-------C-cEEE-----ecCCccc---cCCCcEEEEEE--eCCEEEEEEEecCC
Q 012545 366 TGYDYLPYFYSRAFDLSWQFYGDNV-------G-DTVL-----FGDNDLA---SATHKFGTYWI--KDGKVVGVFLESGT 427 (461)
Q Consensus 366 ~~~~~~p~~~~~~~~~~~~~~g~~~-------~-~~~~-----~~~~~~~---~~~~~~~~~~~--~~~~i~G~~~~g~~ 427 (461)
..|..+|+..++.+++..+ |.++ | ..+. +...... ..+.+|.|+++ ++|+|||++++|+.
T Consensus 355 ~~~~~~p~~~~~~~~~~~v--Gl~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~ 432 (479)
T 2hqm_A 355 LDYENVPSVIFSHPEAGSI--GISEKEAIEKYGKENIKVYNSKFTAMYYAMLSEKSPTRYKIVCAGPNEKVVGLHIVGDS 432 (479)
T ss_dssp CCCTTCCEEECCSSCEEEE--ECCHHHHHHHHCGGGEEEEEEEECCGGGGGCSSCCCEEEEEEEETTTTEEEEEEEESTT
T ss_pred CCCCCCCeEEECCCCeEEE--eCCHHHHHhcCCCCcEEEEEEeccHHHHHhhcCCCcEEEEEEEECCCCEEEEEEEECCC
Confidence 5667788877666665555 5443 2 1121 1111111 23567889888 47999999999999
Q ss_pred HHH-HHHHHHHHHcCCCCCChhhhhccCCCcccC
Q 012545 428 PEE-NKAIAKVARVQPSVESLDVLKNEGLSFASK 460 (461)
Q Consensus 428 ~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 460 (461)
+.+ ++.++.+|+++++++|+..+.-+.+++++.
T Consensus 433 a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~ 466 (479)
T 2hqm_A 433 SAEILQGFGVAIKMGATKADFDNCVAIHPTSAEE 466 (479)
T ss_dssp HHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGG
T ss_pred HHHHHHHHHHHHHCCCCHHHHhhCcCCCCChHHH
Confidence 888 689999999999999988887788777654
No 21
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=1.3e-47 Score=394.64 Aligned_cols=399 Identities=20% Similarity=0.252 Sum_probs=287.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCC----CCCCcccccccCCCC-------CCC---CCCcee
Q 012545 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP----YERPALSKAYLFPEG-------TAR---LPGFHV 68 (461)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~----~~~~~~~~~~~~~~~-------~~~---~~~~~~ 68 (461)
+..+||+|||||++|++||.+|++.|++ |+|||+++... +..+..++.++.... ... ++.+..
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~---V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~ 117 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGR---QLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTE 117 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTT
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCC---EEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHh
Confidence 3568999999999999999999999987 99999997321 111111121110000 000 000000
Q ss_pred e------cCCCCCCCCH---hHH-----HHcCcEEEcCCeEEEEeCCCCEEEcCCCcEEecCEEEEccCCCccccccccc
Q 012545 69 C------VGSGGERLLP---EWY-----KEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVSITSLTSI 134 (461)
Q Consensus 69 ~------~~~~~~~~~~---~~~-----~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~ 134 (461)
. .......... .++ ++.++++++..++..++. +.+.+. ++++.||++|+|||++|.+|++||
T Consensus 118 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~--~~v~~~-g~~~~~d~lViATGs~p~~p~i~G- 193 (523)
T 1mo9_A 118 KVVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDN--HTVEAA-GKVFKAKNLILAVGAGPGTLDVPG- 193 (523)
T ss_dssp CCCCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEET--TEEEET-TEEEEBSCEEECCCEECCCCCSTT-
T ss_pred hhhhHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeC--CEEEEC-CEEEEeCEEEECCCCCCCCCCCCC-
Confidence 0 0000000022 555 778999984457888774 567765 677999999999999996554444
Q ss_pred cccCccccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCC
Q 012545 135 RSKHCLCCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNI 214 (461)
Q Consensus 135 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~ 214 (461)
.+..++++.. ++. +.++..++++++|||+|++|+|+|..|.+.|.
T Consensus 194 -----------------------------~~~~~v~~~~---~~~---~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~ 238 (523)
T 1mo9_A 194 -----------------------------VNAKGVFDHA---TLV---EELDYEPGSTVVVVGGSKTAVEYGCFFNATGR 238 (523)
T ss_dssp -----------------------------TTSBTEEEHH---HHH---HHCCSCCCSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred -----------------------------cccCcEeeHH---HHH---HHHHhcCCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 3334466432 222 12222233899999999999999999999999
Q ss_pred cEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCE--EEEEeCCCc-EEecCEEEEccCCCCC
Q 012545 215 DVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEV--KEVKLKDGR-TLEADIVVVGVGGRPL 291 (461)
Q Consensus 215 ~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~--~~v~~~~G~-~i~aD~vi~a~G~~p~ 291 (461)
+|+++++.+++++. +++++.+.+.+.+++.||+++++++|+++..++++.+ ..|++++|+ ++++|.||+|+|++|+
T Consensus 239 ~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~ 317 (523)
T 1mo9_A 239 RTVMLVRTEPLKLI-KDNETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPR 317 (523)
T ss_dssp EEEEECSSCTTTTC-CSHHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEEC
T ss_pred eEEEEEecCccccc-ccHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccC
Confidence 99999999999987 7999999999999999999999999999987445543 467888887 8999999999999999
Q ss_pred hh-hhh-ccccc-CCCcEEeCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCcccCC
Q 012545 292 IS-LFK-GQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGY 368 (461)
Q Consensus 292 ~~-~~~-~~~~~-~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~ 368 (461)
++ +++ .++.. ++|+|.||+++||+.|+|||+|||++.+ ..+..|..||+.||.||++.. ....|
T Consensus 318 ~~~~l~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~---~~~~~ 384 (523)
T 1mo9_A 318 SAELAKILGLDLGPKGEVLVNEYLQTSVPNVYAVGDLIGGP----------MEMFKARKSGCYAARNVMGEK---ISYTP 384 (523)
T ss_dssp CHHHHHHHTCCBCTTSCBCCCTTSBCSSTTEEECGGGGCSS----------CSHHHHHHHHHHHHHHHTTCC---CCCCC
T ss_pred CccCHHHcCCccCCCCCEEECCCCccCCCCEEEEeecCCCc----------ccHHHHHHHHHHHHHHHcCCC---CCCCC
Confidence 98 564 45666 5788999999999999999999999865 457789999999999999743 12346
Q ss_pred CCCCeEEEecCCcceEEccCCC------CcEEEec--CCcc--------------------c--cCCCcEEEEEE--eCC
Q 012545 369 DYLPYFYSRAFDLSWQFYGDNV------GDTVLFG--DNDL--------------------A--SATHKFGTYWI--KDG 416 (461)
Q Consensus 369 ~~~p~~~~~~~~~~~~~~g~~~------~~~~~~~--~~~~--------------------~--~~~~~~~~~~~--~~~ 416 (461)
..+|+++++.+++. .+|.++ |..+... .... . ....+|.|+++ ++|
T Consensus 385 ~~~p~~~~~~~~~a--~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 462 (523)
T 1mo9_A 385 KNYPDFLHTHYEVS--FLGMGEEEARAAGHEIVTIKMPPDTENGLNVALPASDRTMLYAFGKGTAHMSGFQKIVIDAKTR 462 (523)
T ss_dssp CSCCEEEESSSEEE--EEECCHHHHHHTTCCEEEEEESCCSTTTTCSSCSCCTTTHHHHHSTTTGGGGCEEEEEEETTTC
T ss_pred CCCCeEEECCCceE--EEeCCHHHHHhCCCCEEEEEEecccccccccccccccccccceEEeecCCCCEEEEEEEECCCC
Confidence 77898877666544 446553 2222221 1110 0 23457899888 479
Q ss_pred EEEEEEEecCCHHH-HHHHHHHHHcCCCCCChhhh--hccCCCccc
Q 012545 417 KVVGVFLESGTPEE-NKAIAKVARVQPSVESLDVL--KNEGLSFAS 459 (461)
Q Consensus 417 ~i~G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~ 459 (461)
+|+|+|++|+.+.+ ++.++.+|+.+++++|+..+ .-+.+++.+
T Consensus 463 ~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~~Pt~~e 508 (523)
T 1mo9_A 463 KVLGAHHVGYGAKDAFQYLNVLIKQGLTVDELGDMDELFLNPTHFI 508 (523)
T ss_dssp BEEEEEEEESSCHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSCCHH
T ss_pred EEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHhCCcceECCCHHH
Confidence 99999999998777 69999999999999888776 555565543
No 22
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=5.9e-46 Score=375.76 Aligned_cols=396 Identities=19% Similarity=0.194 Sum_probs=285.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCC---CCCCcccccccCCCC----CC-CCCCceeecC---
Q 012545 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP---YERPALSKAYLFPEG----TA-RLPGFHVCVG--- 71 (461)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~---~~~~~~~~~~~~~~~----~~-~~~~~~~~~~--- 71 (461)
++.+||+|||||+||++||..|++.|++ |+|||++.... +..|.+++.++.... .. ..+.+.....
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~---V~liE~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~ 78 (450)
T 1ges_A 2 TKHYDYIAIGGGSGGIASINRAAMYGQK---CALIEAKELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINK 78 (450)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHTTTCC---EEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEE
T ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCe---EEEEcCCCCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCc
Confidence 4579999999999999999999998887 99999984311 000111111111000 00 0000000000
Q ss_pred CC--------------CCCCCHhHHHHcCcEEEcCCeEEEEeCCCCEEEcCCCcEEecCEEEEccCCCcccccccccccc
Q 012545 72 SG--------------GERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVSITSLTSIRSK 137 (461)
Q Consensus 72 ~~--------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~ 137 (461)
.. ........+++.+++++.+ .+..++. +.+.+ +++++.||++|+|||++|.+|++||+.
T Consensus 79 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~i~~--~~v~~-~g~~~~~d~lviAtGs~p~~p~i~g~~-- 152 (450)
T 1ges_A 79 FNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKG-FARFVDA--KTLEV-NGETITADHILIATGGRPSHPDIPGVE-- 152 (450)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CCEEEET--TEEEE-TTEEEEEEEEEECCCEEECCCCSTTGG--
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEecC--CEEEE-CCEEEEeCEEEECCCCCCCCCCCCCcc--
Confidence 00 0001123346689999998 4555653 56777 677899999999999999766655531
Q ss_pred CccccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEE
Q 012545 138 HCLCCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVS 217 (461)
Q Consensus 138 ~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vt 217 (461)
.+ .+.+++..+ . ..+++++|||+|++|+|+|..|++.|.+|+
T Consensus 153 ------------------------------~~---~~~~~~~~~----~-~~~~~vvViGgG~~g~e~A~~l~~~g~~Vt 194 (450)
T 1ges_A 153 ------------------------------YG---IDSDGFFAL----P-ALPERVAVVGAGYIGVELGGVINGLGAKTH 194 (450)
T ss_dssp ------------------------------GS---BCHHHHHHC----S-SCCSEEEEECCSHHHHHHHHHHHHTTCEEE
T ss_pred ------------------------------ce---ecHHHhhhh----h-hcCCeEEEECCCHHHHHHHHHHHhcCCEEE
Confidence 11 123333322 1 147899999999999999999999999999
Q ss_pred EEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChhh--h
Q 012545 218 MVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISL--F 295 (461)
Q Consensus 218 li~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~~--~ 295 (461)
++++.+++++. +++++.+.+.+.+++.||+++++++|++++.++++. ..+++++|+++++|.||+|+|++|+++. +
T Consensus 195 lv~~~~~~l~~-~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~i~~D~vv~a~G~~p~~~~l~~ 272 (450)
T 1ges_A 195 LFEMFDAPLPS-FDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGS-LTLELEDGRSETVDCLIWAIGREPANDNINL 272 (450)
T ss_dssp EECSSSSSSTT-SCHHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEEESCTTSCH
T ss_pred EEEeCCchhhh-hhHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcE-EEEEECCCcEEEcCEEEECCCCCcCCCCCCc
Confidence 99999998886 899999999999999999999999999998743333 4688899999999999999999999973 3
Q ss_pred -hccccc-CCCcEEeCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCcccCCCCCCe
Q 012545 296 -KGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPY 373 (461)
Q Consensus 296 -~~~~~~-~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~ 373 (461)
..++.. ++|+|.||+++||+.|+|||+|||++.+ ..+..|..||+.||.||++.... ....|..+|+
T Consensus 273 ~~~gl~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~-~~~~~~~~p~ 341 (450)
T 1ges_A 273 EAAGVKTNEKGYIVVDKYQNTNIEGIYAVGDNTGAV----------ELTPVAVAAGRRLSERLFNNKPD-EHLDYSNIPT 341 (450)
T ss_dssp HHHTCCBCTTSCBCCCTTSBCSSTTEEECSGGGTSC----------CCHHHHHHHHHHHHHHHHTTCTT-CCCCCSSCCE
T ss_pred hhcCceECCCCCEeECCCCccCCCCEEEEeccCCCC----------ccHHHHHHHHHHHHHHHcCCCCc-ccCCCCCCCe
Confidence 345666 4788999999999999999999998754 46788999999999999974321 1146777898
Q ss_pred EEEecCCcceEEccCCC-------C-cEEEec-----CCcc---ccCCCcEEEEEE--eCCEEEEEEEecCCHHH-HHHH
Q 012545 374 FYSRAFDLSWQFYGDNV-------G-DTVLFG-----DNDL---ASATHKFGTYWI--KDGKVVGVFLESGTPEE-NKAI 434 (461)
Q Consensus 374 ~~~~~~~~~~~~~g~~~-------~-~~~~~~-----~~~~---~~~~~~~~~~~~--~~~~i~G~~~~g~~~~~-~~~~ 434 (461)
.+++.+++..+ |.++ | ..+... .... .....+|.|+++ ++|+|+|+|++|+++.+ ++.+
T Consensus 342 ~~~~~~~~a~v--G~~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~ 419 (450)
T 1ges_A 342 VVFSHPPIGTV--GLTEPQAREQYGDDQVKVYKSSFTAMYTAVTTHRQPCRMKLVCVGSEEKIVGIHGIGFGMDEMLQGF 419 (450)
T ss_dssp EECCSSCEEEE--ECCHHHHHHHHCGGGEEEEEEEEECHHHHTSSSCCEEEEEEEEETTTTEEEEEEEESTTHHHHHHHH
T ss_pred EEECCCceEEE--eCCHHHHHhcCCCCcEEEEEEECchhhHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHH
Confidence 77766665555 5432 2 112111 1010 123456888887 48999999999999888 6899
Q ss_pred HHHHHcCCCCCChhhhhccCCCcccC
Q 012545 435 AKVARVQPSVESLDVLKNEGLSFASK 460 (461)
Q Consensus 435 ~~~~~~~~~~~~~~~l~~~~~~~~~~ 460 (461)
+.+|+.+++++||..+.-+.+++++.
T Consensus 420 ~~ai~~~~t~~~l~~~~~~hPt~~e~ 445 (450)
T 1ges_A 420 AVALKMGATKKDFDNTVAIHPTAAEE 445 (450)
T ss_dssp HHHHHTTCBHHHHHTSCCCSSCSGGG
T ss_pred HHHHHCCCCHHHHhcCccCCCChHHH
Confidence 99999999999988888888877664
No 23
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=1.1e-46 Score=384.47 Aligned_cols=398 Identities=18% Similarity=0.211 Sum_probs=286.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCC---CCCCcccccccCCC----CCCCCCCceeecCCC---
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP---YERPALSKAYLFPE----GTARLPGFHVCVGSG--- 73 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~--- 73 (461)
..+||+|||||+||++||..|++.|++ |+|||++.... +..|..++.++... .......+.......
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~---V~liE~~~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 95 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGAR---AAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFN 95 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCe---EEEEecCCCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccC
Confidence 469999999999999999999999987 99999875311 00011111111000 000000000000000
Q ss_pred --------------CCCCCHhHHHHcCcEEEcCCeEEEEeCCCCEEEcCCCcEEecCEEEEccCCCcccc---ccccccc
Q 012545 74 --------------GERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVSIT---SLTSIRS 136 (461)
Q Consensus 74 --------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~liiAtG~~~~~~---~~~g~~~ 136 (461)
........++..+++++.+ .+..++.....+. .+++++.||++|+|||++|.+| ++||+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~~~~~~~~v~-~~g~~~~~d~lviAtG~~p~~p~~~~i~G~~- 172 (478)
T 3dk9_A 96 WRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRG-HAAFTSDPKPTIE-VSGKKYTAPHILIATGGMPSTPHESQIPGAS- 172 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEECSCSSCEEE-ETTEEEECSCEEECCCEEECCCCTTTSTTGG-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEeeCCeEEEE-ECCEEEEeeEEEEccCCCCCCCCcCCCCCCc-
Confidence 0001223345679999998 5666665556666 4667799999999999999776 666643
Q ss_pred cCccccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcE
Q 012545 137 KHCLCCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDV 216 (461)
Q Consensus 137 ~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~V 216 (461)
.+ .+.++...+ ...+++++|||+|++|+|+|..|++.|.+|
T Consensus 173 -~~---------------------------------~~~~~~~~~-----~~~~~~vvViGgG~~g~E~A~~l~~~g~~V 213 (478)
T 3dk9_A 173 -LG---------------------------------ITSDGFFQL-----EELPGRSVIVGAGYIAVEMAGILSALGSKT 213 (478)
T ss_dssp -GS---------------------------------BCHHHHTTC-----CSCCSEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred -ee---------------------------------EchHHhhch-----hhcCccEEEECCCHHHHHHHHHHHHcCCeE
Confidence 01 112222111 113789999999999999999999999999
Q ss_pred EEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCC-------CcEEecCEEEEccCCC
Q 012545 217 SMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKD-------GRTLEADIVVVGVGGR 289 (461)
Q Consensus 217 tli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~-------G~~i~aD~vi~a~G~~ 289 (461)
+++++.+++++. +++++.+.+.+.|++.||++++++++++++.++++....+.+.+ |+++++|.||+|+|++
T Consensus 214 tlv~~~~~~l~~-~d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~ 292 (478)
T 3dk9_A 214 SLMIRHDKVLRS-FDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRV 292 (478)
T ss_dssp EEECSSSSSCTT-SCHHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEE
T ss_pred EEEEeCCccccc-cCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccc
Confidence 999999999976 89999999999999999999999999999875455334677765 2679999999999999
Q ss_pred CChhhh---hccccc-CCCcEEeCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCcc
Q 012545 290 PLISLF---KGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTV 365 (461)
Q Consensus 290 p~~~~~---~~~~~~-~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~ 365 (461)
|+++.+ ..++.. ++|+|.||+++||+.|+|||+|||++.+ ..+..|..||+.||.||++.... ..
T Consensus 293 p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~-~~ 361 (478)
T 3dk9_A 293 PNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVCGKA----------LLTPVAIAAGRKLAHRLFEYKED-SK 361 (478)
T ss_dssp ESCTTSCGGGGTCCBCTTCCBCCCTTCBCSSTTEEECGGGGCSS----------CCHHHHHHHHHHHHHHHHSCCTT-CC
T ss_pred cCCCCCCchhcCCeeCCCCCEeeCCCcccCCCCEEEEEecCCCC----------ccHhHHHHHHHHHHHHHcCCCCc-cc
Confidence 999832 345666 6789999999999999999999999655 46788999999999999976321 23
Q ss_pred cCCCCCCeEEEecCCcceEEccCCC-------C-cEE-----EecCCccc---cCCCcEEEEEE--eCCEEEEEEEecCC
Q 012545 366 TGYDYLPYFYSRAFDLSWQFYGDNV-------G-DTV-----LFGDNDLA---SATHKFGTYWI--KDGKVVGVFLESGT 427 (461)
Q Consensus 366 ~~~~~~p~~~~~~~~~~~~~~g~~~-------~-~~~-----~~~~~~~~---~~~~~~~~~~~--~~~~i~G~~~~g~~ 427 (461)
..|..+|+..++.++++.+ |.++ + ..+ .+.....+ ..+.+|.|+++ ++|+|||+|++|++
T Consensus 362 ~~~~~~p~~~~~~p~~a~v--Glte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~ 439 (478)
T 3dk9_A 362 LDYNNIPTVVFSHPPIGTV--GLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLG 439 (478)
T ss_dssp CCCTTCCEEECCSSCEEEE--ECCHHHHHHHHCGGGEEEEEEEECCGGGGGCSSCCCEEEEEEEETTTTEEEEEEEESTT
T ss_pred CCCCCCCeEEECCCceEEe--eCCHHHHHhhCCCccEEEEEeecCcchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCC
Confidence 5778889877766665555 5544 1 111 12211111 23567899887 57999999999999
Q ss_pred HHH-HHHHHHHHHcCCCCCChhhhhccCCCcccC
Q 012545 428 PEE-NKAIAKVARVQPSVESLDVLKNEGLSFASK 460 (461)
Q Consensus 428 ~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 460 (461)
+.+ ++.++.+|+++++++||..+.-+.+++++.
T Consensus 440 a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~ 473 (478)
T 3dk9_A 440 CDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEE 473 (478)
T ss_dssp HHHHHHHHHHHHHTTCBHHHHHTSCCCSSSSGGG
T ss_pred HHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHH
Confidence 888 689999999999999988888888777664
No 24
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=7.2e-47 Score=384.07 Aligned_cols=397 Identities=21% Similarity=0.248 Sum_probs=288.5
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCC---CCCCcccccccCCC----CCCCCCCceeecCC-
Q 012545 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP---YERPALSKAYLFPE----GTARLPGFHVCVGS- 72 (461)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~~~- 72 (461)
|++..+||+|||||++|++||..|++.|++ |+|||++.... +..|..++.++... .....+.+......
T Consensus 1 M~~~~~DVvVIGaG~aGl~aA~~la~~G~~---V~liEk~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~ 77 (463)
T 4dna_A 1 MSAFDYDLFVIGGGSGGVRSGRLAAALGKK---VAIAEEFRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGES 77 (463)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHTTTCC---EEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCC
T ss_pred CCCCCCcEEEECcCHHHHHHHHHHHhCCCE---EEEEeCCCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 555579999999999999999999999987 99999954211 00011111110000 00000000000000
Q ss_pred ----------------CCCCCCHhHHHHcCcEEEcCCeEEEEeCCCCEEEc-CCCcEEecCEEEEccCCCcc-ccccccc
Q 012545 73 ----------------GGERLLPEWYKEKGIELILSTEIVRADIASKTLLS-ATGLIFKYQILVIATGSTVS-ITSLTSI 134 (461)
Q Consensus 73 ----------------~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~-~~~~~~~~d~liiAtG~~~~-~~~~~g~ 134 (461)
........++++.+++++.+ .+..+ +.+.+.+ .+++++.||++|+|||+.|. +|.+||.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i--~~~~v~~~~~~~~~~~d~lviAtG~~p~~~p~i~G~ 154 (463)
T 4dna_A 78 RFDWAKLVAAKEQEIARLEGLYRKGLANAGAEILDT-RAELA--GPNTVKLLASGKTVTAERIVIAVGGHPSPHDALPGH 154 (463)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEES-CEEES--SSSEEEETTTTEEEEEEEEEECCCEEECCCTTSTTG
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEe--eCCEEEEecCCeEEEeCEEEEecCCCcccCCCCCCc
Confidence 00011233455679999998 55554 3567777 56778999999999999997 7666664
Q ss_pred cccCccccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCC
Q 012545 135 RSKHCLCCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNI 214 (461)
Q Consensus 135 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~ 214 (461)
.. + .+.++...+ ...+++++|+|+|++|+|+|..+.+.|.
T Consensus 155 ~~--------------------------------~---~~~~~~~~~-----~~~~~~v~ViGgG~~g~e~A~~l~~~g~ 194 (463)
T 4dna_A 155 EL--------------------------------C---ITSNEAFDL-----PALPESILIAGGGYIAVEFANIFHGLGV 194 (463)
T ss_dssp GG--------------------------------C---BCHHHHTTC-----SSCCSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred cc--------------------------------c---ccHHHHhhh-----hcCCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 21 1 122222211 1147899999999999999999999999
Q ss_pred cEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEE-eCCCcEEecCEEEEccCCCCChh
Q 012545 215 DVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVK-LKDGRTLEADIVVVGVGGRPLIS 293 (461)
Q Consensus 215 ~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~-~~~G~~i~aD~vi~a~G~~p~~~ 293 (461)
+|+++++.+++++. +++++.+.+.+.+++.||+++++++|++++.++++. ..|+ +++|+ +++|.||+|+|++|+++
T Consensus 195 ~Vt~v~~~~~~l~~-~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~~g~-i~aD~Vv~a~G~~p~~~ 271 (463)
T 4dna_A 195 KTTLIYRGKEILSR-FDQDMRRGLHAAMEEKGIRILCEDIIQSVSADADGR-RVATTMKHGE-IVADQVMLALGRMPNTN 271 (463)
T ss_dssp EEEEECSSSSSSTT-SCHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSC-EEEEESSSCE-EEESEEEECSCEEESCT
T ss_pred eEEEEEcCCccccc-cCHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCE-EEEEEcCCCe-EEeCEEEEeeCcccCCC
Confidence 99999999998876 799999999999999999999999999998744443 4688 88997 99999999999999998
Q ss_pred hh---hccccc-CCCcEEeCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCcccCCC
Q 012545 294 LF---KGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYD 369 (461)
Q Consensus 294 ~~---~~~~~~-~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~ 369 (461)
++ ..++.. ++|+|.||+++||+.|+|||+|||++.+ +.+..|..||+.||.||++.... ...|.
T Consensus 272 ~l~l~~~g~~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~~--~~~~~ 339 (463)
T 4dna_A 272 GLGLEAAGVRTNELGAIIVDAFSRTSTPGIYALGDVTDRV----------QLTPVAIHEAMCFIETEYKNNPT--SPDHD 339 (463)
T ss_dssp TSSTGGGTCCBCTTSCBCCCTTCBCSSTTEEECSGGGSSC----------CCHHHHHHHHHHHHHHHHSSCCC--CCCCS
T ss_pred CCCccccCceECCCCCEeECcCCCCCCCCEEEEEecCCCC----------CChHHHHHHHHHHHHHHcCCCCc--ccCCC
Confidence 63 345666 5789999999999999999999999854 56788999999999999976422 24677
Q ss_pred CCCeEEEecCCcceEEccCCC------CcEEEe-----cCCccc---cCCCcEEEEEE--eCCEEEEEEEecCCHHH-HH
Q 012545 370 YLPYFYSRAFDLSWQFYGDNV------GDTVLF-----GDNDLA---SATHKFGTYWI--KDGKVVGVFLESGTPEE-NK 432 (461)
Q Consensus 370 ~~p~~~~~~~~~~~~~~g~~~------~~~~~~-----~~~~~~---~~~~~~~~~~~--~~~~i~G~~~~g~~~~~-~~ 432 (461)
.+|+.+++.+++..+ |.++ |..+.. .....+ ..+.+|.|+++ ++|+|||+|++|+++.+ ++
T Consensus 340 ~~p~~~~~~p~~a~v--G~te~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~ 417 (463)
T 4dna_A 340 LIATAVFSQPEIGTV--GITEEEAARKFQEIEVYRAEFRPMKATLSGRKEKTIMKLVVNAADRKVVGAHILGHDAGEMAQ 417 (463)
T ss_dssp CCCEEECSSSCEEEE--ECCHHHHHHHSSEEEEEEEEECCTTHHHHCCCCCEEEEEEEETTTCBEEEEEEESTTHHHHHH
T ss_pred CCCEEEECCCCeEEe--cCCHHHHHHcCCCeEEEEEeccccchhhcCCCceEEEEEEEECCCCEEEEEEEECCCHHHHHH
Confidence 788877665655444 6554 322222 111111 23567899888 47999999999999888 68
Q ss_pred HHHHHHHcCCCCCChhhhhccCCCcccC
Q 012545 433 AIAKVARVQPSVESLDVLKNEGLSFASK 460 (461)
Q Consensus 433 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 460 (461)
.++.+|+.++|++||..+.-+.+++++.
T Consensus 418 ~~~~ai~~~~t~~~l~~~~~~hPt~~e~ 445 (463)
T 4dna_A 418 LLGISLRAGCTKDDFDRTMAVHPTAAEE 445 (463)
T ss_dssp HHHHHHHTTCBHHHHHTSCCCTTCSGGG
T ss_pred HHHHHHHCCCCHHHHhhcccCCCCHHHH
Confidence 9999999999999988887777777654
No 25
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.1e-46 Score=385.45 Aligned_cols=398 Identities=23% Similarity=0.289 Sum_probs=281.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCC----CCcccccccCCCCC-----CCCCCceeecCCC-
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYE----RPALSKAYLFPEGT-----ARLPGFHVCVGSG- 73 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~----~~~~~~~~~~~~~~-----~~~~~~~~~~~~~- 73 (461)
+.+||+|||||+||++||..|++.|++ |+|||+++..... .|..++.++..... ..+..+.......
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~---V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~ 100 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMK---VAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPK 100 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCe---EEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCc
Confidence 469999999999999999999999987 9999987543210 01111111110000 0000000000000
Q ss_pred ----------------CCCCCHhHHHHcCcEEEcCCeEEEEeCCCCEEEcCCC--cEEecCEEEEccCCCcccccccccc
Q 012545 74 ----------------GERLLPEWYKEKGIELILSTEIVRADIASKTLLSATG--LIFKYQILVIATGSTVSITSLTSIR 135 (461)
Q Consensus 74 ----------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~--~~~~~d~liiAtG~~~~~~~~~g~~ 135 (461)
.......++++.+++++.+ .+..++.....+...+| +++.||++|+|||++| |.+||+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~p--~~ipg~~ 177 (491)
T 3urh_A 101 LNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQG-TGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSDV--AGIPGVE 177 (491)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-EEEECSSSEEEEECTTSCEEEEECSEEEECCCEEC--CCBTTBC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEecCCEEEEEeCCCceEEEEeCEEEEccCCCC--CCCCCcc
Confidence 0011233456789999998 44445544445666666 5799999999999987 3444432
Q ss_pred ccCccccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCc
Q 012545 136 SKHCLCCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNID 215 (461)
Q Consensus 136 ~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~ 215 (461)
+ ..+...+++ ..+...+ ...+++++|||+|++|+|+|..|.+.|.+
T Consensus 178 ~--------------------------~~~~~~~~~---~~~~~~~-----~~~~~~vvViGgG~~g~E~A~~l~~~g~~ 223 (491)
T 3urh_A 178 V--------------------------AFDEKTIVS---STGALAL-----EKVPASMIVVGGGVIGLELGSVWARLGAK 223 (491)
T ss_dssp C--------------------------CCCSSSEEC---HHHHTSC-----SSCCSEEEEECCSHHHHHHHHHHHHHTCE
T ss_pred c--------------------------ccCCeeEEe---hhHhhhh-----hhcCCeEEEECCCHHHHHHHHHHHHcCCE
Confidence 0 011122332 2222221 12578999999999999999999999999
Q ss_pred EEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCC---C--cEEecCEEEEccCCCC
Q 012545 216 VSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKD---G--RTLEADIVVVGVGGRP 290 (461)
Q Consensus 216 Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~---G--~~i~aD~vi~a~G~~p 290 (461)
|+++++.+++++. +++++.+.+.+.+++.||++++++++++++.++++ ..+.+.+ | +++++|.||+|+|++|
T Consensus 224 Vtlv~~~~~~l~~-~d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~--~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p 300 (491)
T 3urh_A 224 VTVVEFLDTILGG-MDGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDG--AKVTFEPVKGGEATTLDAEVVLIATGRKP 300 (491)
T ss_dssp EEEECSSSSSSSS-SCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTE--EEEEEEETTSCCCEEEEESEEEECCCCEE
T ss_pred EEEEecccccccc-CCHHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCE--EEEEEEecCCCceEEEEcCEEEEeeCCcc
Confidence 9999999999987 79999999999999999999999999999873333 3455542 5 5899999999999999
Q ss_pred Chhhh---hccccc-CCCcEEeCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCccc
Q 012545 291 LISLF---KGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVT 366 (461)
Q Consensus 291 ~~~~~---~~~~~~-~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~ 366 (461)
+++++ ..++.. ++|+|.||+++||+.|+|||+|||++.+ ..+..|..||+.||.+|++... ..
T Consensus 301 ~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~---~~ 367 (491)
T 3urh_A 301 STDGLGLAKAGVVLDSRGRVEIDRHFQTSIAGVYAIGDVVRGP----------MLAHKAEDEGVAVAEIIAGQAG---HV 367 (491)
T ss_dssp CCTTSCHHHHTCCBCTTSCBCCCTTCBCSSTTEEECGGGSSSC----------CCHHHHHHHHHHHHHHHTTSCC---CC
T ss_pred CCCccCchhcCceECCCCCEeECCCCCCCCCCEEEEEecCCCc----------cchhHHHHHHHHHHHHHcCCCc---cc
Confidence 99863 445666 5788999999999999999999999765 5688899999999999997542 25
Q ss_pred CCCCCCeEEEecCCcceEEccCCC------CcEEEecCC-----ccc---cCCCcEEEEEE--eCCEEEEEEEecCCHHH
Q 012545 367 GYDYLPYFYSRAFDLSWQFYGDNV------GDTVLFGDN-----DLA---SATHKFGTYWI--KDGKVVGVFLESGTPEE 430 (461)
Q Consensus 367 ~~~~~p~~~~~~~~~~~~~~g~~~------~~~~~~~~~-----~~~---~~~~~~~~~~~--~~~~i~G~~~~g~~~~~ 430 (461)
.|..+|+..++.++ +..+|.++ |..+..... ..+ ..+.+|.|+++ ++|+|||+|++|+++.+
T Consensus 368 ~~~~~p~~~~~~p~--~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e 445 (491)
T 3urh_A 368 NYDVIPGVVYTQPE--VASVGKTEEELKAAGVAYKIGKFPFTANGRARAMLQTDGFVKILADKETDRVLGGHIIGFGAGE 445 (491)
T ss_dssp CTTCCCEEECSSSC--EEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEESTTHHH
T ss_pred CCCCCCEEEEccCC--eEEEeCCHHHHHhCCCCEEEEEEecCcchhhhcCCCCcEEEEEEEECCCCEEEEEEEECCCHHH
Confidence 67778887655444 44556654 332322221 111 23568999887 47999999999999888
Q ss_pred -HHHHHHHHHcCCCCCChhhhhccCCCccc
Q 012545 431 -NKAIAKVARVQPSVESLDVLKNEGLSFAS 459 (461)
Q Consensus 431 -~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 459 (461)
++.++.+|++++|++||..+.-+.+++++
T Consensus 446 ~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e 475 (491)
T 3urh_A 446 MIHEIAVLMEFGGSSEDLGRTCHAHPTMSE 475 (491)
T ss_dssp HHHHHHHHHHTTCBHHHHHTSCCCSSCTTH
T ss_pred HHHHHHHHHHCCCcHHHHhcCccCCCChHH
Confidence 68999999999999998887777776654
No 26
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=1.3e-45 Score=375.95 Aligned_cols=397 Identities=20% Similarity=0.229 Sum_probs=284.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCC----CCcccccccCCC-----------CCCCCC--Cce
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYE----RPALSKAYLFPE-----------GTARLP--GFH 67 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~----~~~~~~~~~~~~-----------~~~~~~--~~~ 67 (461)
.+||+|||||+||++||..|++.|++ |+|||+++..... .+..++.++... ....++ ...
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~---V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~ 82 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFK---TVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVR 82 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCe---EEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCc
Confidence 58999999999999999999999886 9999998643110 011111111100 000000 000
Q ss_pred eecCC----------CCCCCCHhHHHHcCcEEEcCCeEEEEeCCCCEEEcCC-C-cEEecCEEEEccCCCcccccccccc
Q 012545 68 VCVGS----------GGERLLPEWYKEKGIELILSTEIVRADIASKTLLSAT-G-LIFKYQILVIATGSTVSITSLTSIR 135 (461)
Q Consensus 68 ~~~~~----------~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~-~-~~~~~d~liiAtG~~~~~~~~~g~~ 135 (461)
..... .......+++++.+++++.++ +..++.....|.+.+ + +++.||+||+|||++|.+|++||+
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~-~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~p~i~g~- 160 (474)
T 1zmd_A 83 LNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGY-GKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITI- 160 (474)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESE-EEEEETTEEEEECTTSCEEEEEEEEEEECCCEEECCCTTCCC-
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEecCCEEEEEecCCCcEEEEeCEEEECCCCCCCCCCCCCC-
Confidence 00000 000012355667899999984 455665444566665 4 579999999999999965544442
Q ss_pred ccCccccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCc
Q 012545 136 SKHCLCCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNID 215 (461)
Q Consensus 136 ~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~ 215 (461)
+..++++ ..++..+ .. .+++++|||+|++|+|+|..|++.|.+
T Consensus 161 -----------------------------~~~~v~t---~~~~~~~----~~-~~~~vvViGgG~~g~E~A~~l~~~g~~ 203 (474)
T 1zmd_A 161 -----------------------------DEDTIVS---STGALSL----KK-VPEKMVVIGAGVIGVELGSVWQRLGAD 203 (474)
T ss_dssp -----------------------------CSSSEEC---HHHHTTC----SS-CCSEEEEECCSHHHHHHHHHHHHTTCE
T ss_pred -----------------------------CcCcEEc---HHHHhhc----cc-cCceEEEECCCHHHHHHHHHHHHcCCE
Confidence 2233443 3333222 11 478999999999999999999999999
Q ss_pred EEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEE-----eCCCcEEecCEEEEccCCCC
Q 012545 216 VSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVK-----LKDGRTLEADIVVVGVGGRP 290 (461)
Q Consensus 216 Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~-----~~~G~~i~aD~vi~a~G~~p 290 (461)
|+++++.+++++..+++++.+.+.+.+++.||+++++++|++++.++++.+ .++ ..+++++++|.||+|+|++|
T Consensus 204 Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~i~~D~vv~a~G~~p 282 (474)
T 1zmd_A 204 VTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKI-DVSIEAASGGKAEVITCDVLLVCIGRRP 282 (474)
T ss_dssp EEEECSSSSSSCSSCCHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCE-EEEEEETTSCCCEEEEESEEEECSCEEE
T ss_pred EEEEeccCccCCcccCHHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceE-EEEEEecCCCCceEEEcCEEEECcCCCc
Confidence 999999999998448999999999999999999999999999987433322 444 35677899999999999999
Q ss_pred Chhh--h-hccccc-CCCcEEeCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCccc
Q 012545 291 LISL--F-KGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVT 366 (461)
Q Consensus 291 ~~~~--~-~~~~~~-~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~ 366 (461)
++++ + +.++.. .+|+|.||+++||+.|+|||+|||+..+ ..+..|..||+.||.||++.. ...
T Consensus 283 ~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~---~~~ 349 (474)
T 1zmd_A 283 FTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGP----------MLAHKAEDEGIICVEGMAGGA---VHI 349 (474)
T ss_dssp CCTTSSHHHHTCCCCTTSCCCCCTTCBCSSTTEEECGGGSSSC----------CCHHHHHHHHHHHHHHHTTCC---CCC
T ss_pred CCCcCCchhcCCccCCCCCEEECcCCccCCCCEEEeeecCCCC----------ccHHHHHHHHHHHHHHhcCCC---CcC
Confidence 9986 3 345665 4688999999999999999999999865 457789999999999999753 124
Q ss_pred CCCCCCeEEEecCCcceEEccCCC------CcEEEecC-----Cccc---cCCCcEEEEEEe--CCEEEEEEEecCCHHH
Q 012545 367 GYDYLPYFYSRAFDLSWQFYGDNV------GDTVLFGD-----NDLA---SATHKFGTYWIK--DGKVVGVFLESGTPEE 430 (461)
Q Consensus 367 ~~~~~p~~~~~~~~~~~~~~g~~~------~~~~~~~~-----~~~~---~~~~~~~~~~~~--~~~i~G~~~~g~~~~~ 430 (461)
.|..+|+++++.++ +..+|.++ |..+.... .... ....+|.|++++ +|+|+|++++|+.+.+
T Consensus 350 ~~~~~p~~~~~~~~--~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~ 427 (474)
T 1zmd_A 350 DYNCVPSVIYTHPE--VAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGE 427 (474)
T ss_dssp CGGGCCEEECSSSE--EEEEECCHHHHHHHTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHH
T ss_pred CCCCCCEEEECCCC--eEEEeCCHHHHHhcCCCEEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHH
Confidence 56778887655454 45556654 22222211 1111 235679998885 7999999999999877
Q ss_pred -HHHHHHHHHcCCCCCChhhhhccCCCccc
Q 012545 431 -NKAIAKVARVQPSVESLDVLKNEGLSFAS 459 (461)
Q Consensus 431 -~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 459 (461)
++.++.+|+++++++|+..+.-+.++|.+
T Consensus 428 ~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e 457 (474)
T 1zmd_A 428 MVNEAALALEYGASCEDIARVCHAHPTLSE 457 (474)
T ss_dssp HHHHHHHHHHHTCBHHHHHHSCCCTTCTHH
T ss_pred HHHHHHHHHHCCCCHHHHhhCcCCCCCHHH
Confidence 69999999999999998887777776654
No 27
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=1e-46 Score=385.27 Aligned_cols=397 Identities=19% Similarity=0.258 Sum_probs=283.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHH-cCCCCCcEEEEe---------CCCCCC---CCCCcccccccCCCC----CCCCC
Q 012545 2 AEKSFKYVILGGGVSAGYAAREFAK-QGVKPGELAIIS---------KEAVAP---YERPALSKAYLFPEG----TARLP 64 (461)
Q Consensus 2 m~~~~dvvIIG~G~aGl~aA~~L~~-~g~~~~~V~vie---------~~~~~~---~~~~~~~~~~~~~~~----~~~~~ 64 (461)
|++.+||+|||||+||++||..|++ .|++ |+||| ++.... +..|..++.++.... ....+
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~G~~---V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~ 80 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLYGKR---VAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESA 80 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHHCCC---EEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCEEEECCChhHHHHHHHHHHhcCCe---EEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHH
Confidence 3446899999999999999999999 9987 99999 322100 000111111111000 00000
Q ss_pred CceeecCC-----CC--------------CCCCHhHHHHc-CcEEEcCCeEEEEeCCCCEEEcC---C-----CcEEecC
Q 012545 65 GFHVCVGS-----GG--------------ERLLPEWYKEK-GIELILSTEIVRADIASKTLLSA---T-----GLIFKYQ 116 (461)
Q Consensus 65 ~~~~~~~~-----~~--------------~~~~~~~~~~~-~v~~~~~~~v~~i~~~~~~v~~~---~-----~~~~~~d 116 (461)
.+...... +. .......+++. +++++.+ .+..++ .++|.+. + ++++.||
T Consensus 81 ~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g-~~~~i~--~~~v~v~~~~~~~~~~~~~~~~d 157 (495)
T 2wpf_A 81 GFGWEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLG-WGSLES--KNVVVVRETADPKSAVKERLQAD 157 (495)
T ss_dssp TTTEECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEES-EEEEEE--TTEEEEESSSSTTSCEEEEEEEE
T ss_pred hcCcccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEe-EEEEee--CCEEEEeecCCccCCCCeEEEcC
Confidence 00000000 00 00012234566 9999998 566665 4667665 4 6679999
Q ss_pred EEEEccCCCccccccccccccCccccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEE
Q 012545 117 ILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVV 196 (461)
Q Consensus 117 ~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~Vv 196 (461)
+||||||++|.+|.+||.+ .+++ .+++..+ . ..+++++||
T Consensus 158 ~lViATGs~p~~p~i~G~~--------------------------------~~~~---~~~~~~~----~-~~~~~vvVi 197 (495)
T 2wpf_A 158 HILLATGSWPQMPAIPGIE--------------------------------HCIS---SNEAFYL----P-EPPRRVLTV 197 (495)
T ss_dssp EEEECCCEEECCCCCTTGG--------------------------------GCEE---HHHHTTC----S-SCCSEEEEE
T ss_pred EEEEeCCCCcCCCCCCCcc--------------------------------cccc---HHHHHhh----h-hcCCeEEEE
Confidence 9999999999766655541 1222 2222211 1 147899999
Q ss_pred CCCHHHHHHHHHHHHC---CCcEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCC
Q 012545 197 GGGYIGLELSAALKIN---NIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKD 273 (461)
Q Consensus 197 G~G~~g~e~a~~l~~~---g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~ 273 (461)
|+|++|+|+|..|++. |.+|+++++.+++++. +++++.+.+.+.|++.||+++++++|++++.++++ ...|++.+
T Consensus 198 GgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~-~~~v~~~~ 275 (495)
T 2wpf_A 198 GGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRG-FDETIREEVTKQLTANGIEIMTNENPAKVSLNTDG-SKHVTFES 275 (495)
T ss_dssp CSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTT-SCHHHHHHHHHHHHHTTCEEEESCCEEEEEECTTS-CEEEEETT
T ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccc-cCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCc-eEEEEECC
Confidence 9999999999999999 9999999999999986 89999999999999999999999999999874333 35788899
Q ss_pred CcEEecCEEEEccCCCCChhhh---hccccc-CCCcEEeCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHH
Q 012545 274 GRTLEADIVVVGVGGRPLISLF---KGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSA 349 (461)
Q Consensus 274 G~~i~aD~vi~a~G~~p~~~~~---~~~~~~-~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g 349 (461)
|+++++|.||+|+|++|+++.+ ..++.. ++|+|.||+++||+.|+|||+|||++.+ ..+..|..||
T Consensus 276 G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~----------~l~~~A~~~g 345 (495)
T 2wpf_A 276 GKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDITDRL----------MLTPVAINEG 345 (495)
T ss_dssp SCEEEESEEEECSCEEECCGGGTGGGTTCCBCTTSSBCCCTTCBCSSTTEEECGGGGCSC----------CCHHHHHHHH
T ss_pred CcEEEcCEEEECCCCcccccccchhhcCccCCCCCCEEECCCCccCCCCEEEEeccCCCc----------cCHHHHHHHH
Confidence 9999999999999999999743 345665 4789999999999999999999999753 5688899999
Q ss_pred HHHHHHHhcccCCCcccCCCCCCeEEEecCCcceEEccCCC------CcEEEec--CCcc------ccCCCcE-EEEEEe
Q 012545 350 EQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV------GDTVLFG--DNDL------ASATHKF-GTYWIK 414 (461)
Q Consensus 350 ~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~------~~~~~~~--~~~~------~~~~~~~-~~~~~~ 414 (461)
+.||.||++... ....|..+|+..++.+++ ..+|.++ +..+... ...+ .....+| +|++++
T Consensus 346 ~~aa~~i~g~~~--~~~~~~~~p~~~~~~~~~--a~vGl~e~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~klv~~ 421 (495)
T 2wpf_A 346 AALVDTVFGNKP--RKTDHTRVASAVFSIPPI--GTCGLIEEVAAKEFEKVAVYMSSFTPLMHNISGSKYKKFVAKIVTN 421 (495)
T ss_dssp HHHHHHHHSSCC--CCCCCSSCEEEECCSSCE--EEEECCHHHHHHHSSEEEEEEEEECCTHHHHHSCTTCCEEEEEEEE
T ss_pred HHHHHHhcCCCC--CcCCCCCCCEEEECCCCe--EEEeCCHHHHHhcCCCEEEEEEecCchhhhhhcCCCcEEEEEEEEE
Confidence 999999997532 225677788766655554 4456553 2222211 1111 1235679 998884
Q ss_pred --CCEEEEEEEecCCHHH-HHHHHHHHHcCCCCCChhhhhccCCCcccC
Q 012545 415 --DGKVVGVFLESGTPEE-NKAIAKVARVQPSVESLDVLKNEGLSFASK 460 (461)
Q Consensus 415 --~~~i~G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 460 (461)
+|+|||+|++|+.+.+ ++.++.+|+.+++++||..+.-+.+++.+.
T Consensus 422 ~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~ 470 (495)
T 2wpf_A 422 HSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGVHPTSAEE 470 (495)
T ss_dssp TTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCSGGG
T ss_pred CCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHH
Confidence 7999999999999888 689999999999999988887777777653
No 28
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=3e-45 Score=371.76 Aligned_cols=396 Identities=20% Similarity=0.244 Sum_probs=285.1
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCC---CCCCcccccccCCCC----CCCCCCceeecCC--
Q 012545 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP---YERPALSKAYLFPEG----TARLPGFHVCVGS-- 72 (461)
Q Consensus 2 m~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-- 72 (461)
|++.+||+|||||+||++||..|++.|++ |+|||++.... +..|.+++.++.... ....+.+......
T Consensus 1 M~~~~dVvIIGgG~aGl~aA~~l~~~g~~---V~liE~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~ 77 (463)
T 2r9z_A 1 MTQHFDLIAIGGGSGGLAVAEKAAAFGKR---VALIESKALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGT 77 (463)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---
T ss_pred CCccCcEEEECCCHHHHHHHHHHHhCCCc---EEEEcCCCCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCC
Confidence 34679999999999999999999999887 99999984311 000111111110000 0000000000000
Q ss_pred -C--------------CCCCCHhHHHHcCcEEEcCCeEEEEeCCCCEEEcCCCcEEecCEEEEccCCCcccccccccccc
Q 012545 73 -G--------------GERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVSITSLTSIRSK 137 (461)
Q Consensus 73 -~--------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~ 137 (461)
+ ....+...+++.+++++.+ .+..++ .+.|.+ +++++.||++|+|||++|.+|.+||..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~--~~~v~~-~g~~~~~d~lviAtGs~p~~p~i~G~~-- 151 (463)
T 2r9z_A 78 LDWPRLVAGRDRYIGAINSFWDGYVERLGITRVDG-HARFVD--AHTIEV-EGQRLSADHIVIATGGRPIVPRLPGAE-- 151 (463)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEEEE--TTEEEE-TTEEEEEEEEEECCCEEECCCSCTTGG--
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEe-EEEEcc--CCEEEE-CCEEEEcCEEEECCCCCCCCCCCCCcc--
Confidence 0 0001123346689999998 455555 457777 677899999999999999666555531
Q ss_pred CccccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEE
Q 012545 138 HCLCCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVS 217 (461)
Q Consensus 138 ~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vt 217 (461)
.+ .+..++..+ . ..+++++|||+|++|+|+|..|++.|.+|+
T Consensus 152 ------------------------------~~---~~~~~~~~~----~-~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vt 193 (463)
T 2r9z_A 152 ------------------------------LG---ITSDGFFAL----Q-QQPKRVAIIGAGYIGIELAGLLRSFGSEVT 193 (463)
T ss_dssp ------------------------------GS---BCHHHHHHC----S-SCCSEEEEECCSHHHHHHHHHHHHTTCEEE
T ss_pred ------------------------------ce---ecHHHHhhh----h-ccCCEEEEECCCHHHHHHHHHHHhcCCEEE
Confidence 11 123333322 1 147899999999999999999999999999
Q ss_pred EEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCc-EEecCEEEEccCCCCChhhh-
Q 012545 218 MVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGR-TLEADIVVVGVGGRPLISLF- 295 (461)
Q Consensus 218 li~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~-~i~aD~vi~a~G~~p~~~~~- 295 (461)
++++.+++++. +++++.+.+.+.+++.||+++++++|++++.++++ ..+++++|+ ++++|.||+|+|++|+++.+
T Consensus 194 lv~~~~~~l~~-~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~G~~~i~~D~vv~a~G~~p~~~~l~ 270 (463)
T 2r9z_A 194 VVALEDRLLFQ-FDPLLSATLAENMHAQGIETHLEFAVAALERDAQG--TTLVAQDGTRLEGFDSVIWAVGRAPNTRDLG 270 (463)
T ss_dssp EECSSSSSSTT-SCHHHHHHHHHHHHHTTCEEESSCCEEEEEEETTE--EEEEETTCCEEEEESEEEECSCEEESCTTSC
T ss_pred EEEcCCccccc-cCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCe--EEEEEeCCcEEEEcCEEEECCCCCcCCCCCC
Confidence 99999998886 89999999999999999999999999999873333 578889998 89999999999999999732
Q ss_pred --hccccc-CCCcEEeCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCcccCCCCCC
Q 012545 296 --KGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLP 372 (461)
Q Consensus 296 --~~~~~~-~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p 372 (461)
..++.. ++|+|.||+++||+.|+|||+|||++.+ ..+..|..||+.+|.||++.... ....|..+|
T Consensus 271 ~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~~-~~~~~~~~p 339 (463)
T 2r9z_A 271 LEAAGIEVQSNGMVPTDAYQNTNVPGVYALGDITGRD----------QLTPVAIAAGRRLAERLFDGQSE-RKLDYDNIP 339 (463)
T ss_dssp HHHHTCCCCTTSCCCCCTTSBCSSTTEEECGGGGTSC----------CCHHHHHHHHHHHHHHHHSCCTT-CCCCCSSCC
T ss_pred chhcCCccCCCCCEeECCCCccCCCCEEEEeecCCCc----------ccHHHHHHHHHHHHHHHcCCCCc-ccCCCCCCC
Confidence 345665 4788999999999999999999998754 56788999999999999975321 114677789
Q ss_pred eEEEecCCcceEEccCCC-------CcEEEe-----cCCcc---ccCCCcEEEEEE--eCCEEEEEEEecCCHHH-HHHH
Q 012545 373 YFYSRAFDLSWQFYGDNV-------GDTVLF-----GDNDL---ASATHKFGTYWI--KDGKVVGVFLESGTPEE-NKAI 434 (461)
Q Consensus 373 ~~~~~~~~~~~~~~g~~~-------~~~~~~-----~~~~~---~~~~~~~~~~~~--~~~~i~G~~~~g~~~~~-~~~~ 434 (461)
+.+++.+++..+ |.++ |..+.. ..... .....+|.|+++ ++++|+|++++|+.+.+ ++.+
T Consensus 340 ~~~~~~~~~a~v--Gl~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~ 417 (463)
T 2r9z_A 340 TVVFAHPPLSKV--GLSEPEARERLGDVLTVYETSFTPMRYALNEHGPKTAMKLVCAGPEQRVVGVHVIGDGADEMLQGF 417 (463)
T ss_dssp EEECCSSCEEEE--ECCHHHHHHHHCSCEEEEEEEECCGGGTTSSSCCCEEEEEEEETTTTEEEEEEEESTTGGGTSHHH
T ss_pred EEEeCCCCeEEE--cCCHHHHHhcCCCCEEEEEEEcccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHH
Confidence 877766665554 5432 221221 11111 123567888888 47999999999998888 6999
Q ss_pred HHHHHcCCCCCChhhhhccCCCcccC
Q 012545 435 AKVARVQPSVESLDVLKNEGLSFASK 460 (461)
Q Consensus 435 ~~~~~~~~~~~~~~~l~~~~~~~~~~ 460 (461)
+.+|+.+++++|+..+.-+.+++.+.
T Consensus 418 ~~ai~~~~t~~~l~~~~~~hPt~~e~ 443 (463)
T 2r9z_A 418 AVAVKMGATKADFDNTVAIHPGSAEE 443 (463)
T ss_dssp HHHHHTTCBHHHHHTSCCCSSSSGGG
T ss_pred HHHHHCCCCHHHHhcCccCCCCHHHH
Confidence 99999999999988877777777653
No 29
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=5.6e-47 Score=386.68 Aligned_cols=397 Identities=19% Similarity=0.214 Sum_probs=281.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCC---CC-CcccccccCC---------CCCCCCCCcee
Q 012545 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPY---ER-PALSKAYLFP---------EGTARLPGFHV 68 (461)
Q Consensus 2 m~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~---~~-~~~~~~~~~~---------~~~~~~~~~~~ 68 (461)
|+..+||+|||||+||+++|..|++.|++ |+|||+++.... .. +..++.++.. .....++....
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~~G~~---V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~ 79 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAADEGLK---VAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEP 79 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCC
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhCCCe---EEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence 55579999999999999999999999987 999999654320 00 1111111100 00000000000
Q ss_pred ecCCC------------CCCCCHhHHHHcCcEEEcCCeEEEEeCCCCEEEcCCC------------cEEecCEEEEccCC
Q 012545 69 CVGSG------------GERLLPEWYKEKGIELILSTEIVRADIASKTLLSATG------------LIFKYQILVIATGS 124 (461)
Q Consensus 69 ~~~~~------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~------------~~~~~d~liiAtG~ 124 (461)
..... .......++++.+++++.++.+. ++...-.+.+.++ .++.||++|+|||+
T Consensus 80 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs 158 (482)
T 1ojt_A 80 ELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQF-LDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGS 158 (482)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE-EETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCE
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEE-ccCCEEEEEecCCcccccccccCcceEEEcCEEEECCCC
Confidence 00000 00001245567899999986543 4432222333345 57999999999999
Q ss_pred CccccccccccccCccccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHH
Q 012545 125 TVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLE 204 (461)
Q Consensus 125 ~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e 204 (461)
+|..| +. ++ .+ ..++ +..++..+. ..+++++|||+|++|+|
T Consensus 159 ~p~~~---------------------------~~--i~-~~-~~v~---~~~~~~~~~-----~~~~~vvViGgG~ig~E 199 (482)
T 1ojt_A 159 RVTKL---------------------------PF--IP-ED-PRII---DSSGALALK-----EVPGKLLIIGGGIIGLE 199 (482)
T ss_dssp EECCC---------------------------SS--CC-CC-TTEE---CHHHHTTCC-----CCCSEEEEESCSHHHHH
T ss_pred CCCCC---------------------------CC--CC-cc-CcEE---cHHHHhccc-----ccCCeEEEECCCHHHHH
Confidence 98432 21 22 11 1343 344433321 14789999999999999
Q ss_pred HHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCC----CcEEecC
Q 012545 205 LSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKD----GRTLEAD 280 (461)
Q Consensus 205 ~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~----G~~i~aD 280 (461)
+|..|++.|.+|+++++.+++++. +++++.+.+.+.|++.||+++++++|++++.+++ ...+++.+ |+++++|
T Consensus 200 ~A~~l~~~G~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~--~~~v~~~~~~~~g~~~~~D 276 (482)
T 1ojt_A 200 MGTVYSTLGSRLDVVEMMDGLMQG-ADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKED--GVYVTFEGANAPKEPQRYD 276 (482)
T ss_dssp HHHHHHHHTCEEEEECSSSSSSTT-SCHHHHHHHHHHHGGGEEEEECSCEEEEEEEETT--EEEEEEESSSCCSSCEEES
T ss_pred HHHHHHHcCCeEEEEEECCccccc-cCHHHHHHHHHHHHhcCCEEEECCEEEEEEEcCC--eEEEEEeccCCCceEEEcC
Confidence 999999999999999999999986 8999999999999999999999999999987322 24677766 7789999
Q ss_pred EEEEccCCCCChhhh--h-ccccc-CCCcEEeCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHH
Q 012545 281 IVVVGVGGRPLISLF--K-GQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTI 356 (461)
Q Consensus 281 ~vi~a~G~~p~~~~~--~-~~~~~-~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i 356 (461)
.||+|+|++||++++ + .++.. ++|+|.||+++||+.|+|||+|||++.+ ..+..|..||+.||.||
T Consensus 277 ~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~----------~l~~~A~~~g~~aa~~i 346 (482)
T 1ojt_A 277 AVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHIYAIGDIVGQP----------MLAHKAVHEGHVAAENC 346 (482)
T ss_dssp CEEECCCEEECGGGTTGGGTTCCCCTTSCCCCCTTSBCSSTTEEECGGGTCSS----------CCHHHHHHHHHHHHHHH
T ss_pred EEEECcCCCcCCCCCChhhcCceeCCCCCEeeCCCcccCCCCEEEEEcccCCC----------ccHHHHHHHHHHHHHHH
Confidence 999999999999873 3 35665 4588999999999999999999999864 46778999999999999
Q ss_pred hcccCCCcccCCCCCCeEEEecCCcceEEccCCC------CcEEEecCC-----ccc---cCCCcEEEEEE--eCCEEEE
Q 012545 357 MATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV------GDTVLFGDN-----DLA---SATHKFGTYWI--KDGKVVG 420 (461)
Q Consensus 357 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~------~~~~~~~~~-----~~~---~~~~~~~~~~~--~~~~i~G 420 (461)
++.. ....|..+|++.++.+++ ..+|.++ |..+..... ... ....+|.|+++ ++|+|+|
T Consensus 347 ~g~~---~~~~~~~~p~~~~~~~~~--a~vG~te~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG 421 (482)
T 1ojt_A 347 AGHK---AYFDARVIPGVAYTSPEV--AWVGETELSAKASARKITKANFPWAASGRAIANGCDKPFTKLIFDAETGRIIG 421 (482)
T ss_dssp TTCC---CCCCCCCCCEEECSSSCE--EEEECCHHHHHHHTCCEEEEEEEGGGCHHHHHTTCCSCEEEEEEETTTCBEEE
T ss_pred cCCC---ccCCCCCCCEEEEcCCCe--EEEeCCHHHHHhcCCCEEEEEEEcCcchHHhhcCCCcEEEEEEEECCCCEEEE
Confidence 9743 124566778776655554 4456554 322222211 111 23567999988 6899999
Q ss_pred EEEecCCHHH-HHHHHHHHHcCCCCCChhhhhccCCCccc
Q 012545 421 VFLESGTPEE-NKAIAKVARVQPSVESLDVLKNEGLSFAS 459 (461)
Q Consensus 421 ~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 459 (461)
++++|+.+.+ ++.++.+|+++++++|+..+.-+.+++++
T Consensus 422 ~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e 461 (482)
T 1ojt_A 422 GGIVGPNGGDMIGEVCLAIEMGCDAADIGKTIHPHPTLGE 461 (482)
T ss_dssp EEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSSSTT
T ss_pred EEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHHH
Confidence 9999999887 68999999999999998887777777654
No 30
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=2.8e-47 Score=389.98 Aligned_cols=395 Identities=18% Similarity=0.208 Sum_probs=271.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCC------CC------CCcccccccCCCCCC-----CCCCce
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP------YE------RPALSKAYLFPEGTA-----RLPGFH 67 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~------~~------~~~~~~~~~~~~~~~-----~~~~~~ 67 (461)
.||++|||||+||+.||..++++|.+ |+|||+..... +. .|.++|.++...... ....+.
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~k---ValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~G 118 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGAR---VLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYG 118 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCC---EEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGT
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCe---EEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcC
Confidence 38999999999999999999999987 99999865321 11 122234333221100 000010
Q ss_pred eecCC---C--------------CCCCCHhHHHHcCcEEEcCCeEEEEeCCCCEEEc------CCCcEEecCEEEEccCC
Q 012545 68 VCVGS---G--------------GERLLPEWYKEKGIELILSTEIVRADIASKTLLS------ATGLIFKYQILVIATGS 124 (461)
Q Consensus 68 ~~~~~---~--------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~------~~~~~~~~d~liiAtG~ 124 (461)
..... + ........+++.+|+++.+ ...-++ .+++.+ .+++++.+|++|||||+
T Consensus 119 i~~~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G-~a~f~~--~~~v~V~~~~~~~~~~~i~a~~iiIATGs 195 (542)
T 4b1b_A 119 WKFDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYING-LAKLKD--KNTVSYYLKGDLSKEETVTGKYILIATGC 195 (542)
T ss_dssp EEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECE-EEEEEE--TTEEEEEEC--CCCEEEEEEEEEEECCCE
T ss_pred cccCcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEee-eEEEcC--CCcceEeecccCCceEEEeeeeEEeccCC
Confidence 00000 0 0011223456789999887 444444 344432 23457999999999999
Q ss_pred CccccccccccccCccccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHH
Q 012545 125 TVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLE 204 (461)
Q Consensus 125 ~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e 204 (461)
+|.+|+.++. +...+++ .+++..+ ...|++++|||+|++|+|
T Consensus 196 ~P~~P~~~~~------------------------------~~~~~~t---s~~~l~l-----~~lP~~lvIIGgG~IGlE 237 (542)
T 4b1b_A 196 RPHIPDDVEG------------------------------AKELSIT---SDDIFSL-----KKDPGKTLVVGASYVALE 237 (542)
T ss_dssp EECCCSSSBT------------------------------HHHHCBC---HHHHTTC-----SSCCCSEEEECCSHHHHH
T ss_pred CCCCCCcccC------------------------------CCccccC---chhhhcc-----ccCCceEEEECCCHHHHH
Confidence 9965532221 1111222 2232222 115899999999999999
Q ss_pred HHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEE
Q 012545 205 LSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVV 284 (461)
Q Consensus 205 ~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~ 284 (461)
+|..|+++|.+||++.+ +++++. +|+++++.+.+.|++.||+++++..+++++..+ ....+.+.++.++.+|.|++
T Consensus 238 ~A~~~~~lG~~VTii~~-~~~L~~-~D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~--~~~~v~~~~~~~~~~D~vLv 313 (542)
T 4b1b_A 238 CSGFLNSLGYDVTVAVR-SIVLRG-FDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMD--DKILVEFSDKTSELYDTVLY 313 (542)
T ss_dssp HHHHHHHHTCCEEEEES-SCSSTT-SCHHHHHHHHHHHHHTTCEEEETCCEEEEEEET--TEEEEEETTSCEEEESEEEE
T ss_pred HHHHHHhcCCeEEEecc-cccccc-cchhHHHHHHHHHHhhcceeecceEEEEEEecC--CeEEEEEcCCCeEEEEEEEE
Confidence 99999999999999987 456776 799999999999999999999999999998733 33578889999999999999
Q ss_pred ccCCCCChhhhh---ccccc-CC-CcEEeCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcc
Q 012545 285 GVGGRPLISLFK---GQVAE-NK-GGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMAT 359 (461)
Q Consensus 285 a~G~~p~~~~~~---~~~~~-~~-g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 359 (461)
|+|++||++.+. .++.. .. +.|.||+++|||+|+|||+|||++... .....|..||++++.|+++.
T Consensus 314 AvGR~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~Ts~p~IyAiGDv~~~~p---------~La~~A~~eg~~aa~~i~g~ 384 (542)
T 4b1b_A 314 AIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCTNIPSIFAVGDVAENVP---------ELAPVAIKAGEILARRLFKD 384 (542)
T ss_dssp CSCEEESCGGGCGGGTTCCEETTTTEECCCTTSBCSSTTEEECTTSBTTCC---------CCHHHHHHHHHHHHHHHHSC
T ss_pred cccccCCccccCcccceeeecccCceEeccccccccCCCeEEeccccCCch---------hHHHHHHHHHHHHHHHHhcC
Confidence 999999999774 24444 33 446889999999999999999996532 35677889999999999986
Q ss_pred cCCCcccCCCCCCeEEEecCCcceEEccCCCCc----------EEEecCCc---------------------cccCCCcE
Q 012545 360 EGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVGD----------TVLFGDND---------------------LASATHKF 408 (461)
Q Consensus 360 ~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~----------~~~~~~~~---------------------~~~~~~~~ 408 (461)
.. ....|..+|++.++.++++.+ |.++.+ .+...... ....+.+|
T Consensus 385 ~~--~~~d~~~iP~~vft~PeiA~V--GlTE~eA~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 460 (542)
T 4b1b_A 385 SD--EIMDYSYIPTSIYTPIEYGAC--GYSEEKAYELYGKSNVEVFLQEFNNLEISAVHRQKHIRAQKDEYDLDVSSTCL 460 (542)
T ss_dssp CC--CCCCCSSCCEEECSSSCEEEE--ECCHHHHHHHHCTTTEEEEEC-----------------------------CCC
T ss_pred CC--cccCCCCCceEEeCCCCeEEE--eCCHHHHHHhCCCCcEEEEEeeccchhhhhhhhhhhhhcccccccccCCCceE
Confidence 53 236788899999888887766 544311 11110000 00124578
Q ss_pred EEEEE---eCCEEEEEEEecCCHHH-HHHHHHHHHcCCCCCChhhhhccCCCcccC
Q 012545 409 GTYWI---KDGKVVGVFLESGTPEE-NKAIAKVARVQPSVESLDVLKNEGLSFASK 460 (461)
Q Consensus 409 ~~~~~---~~~~i~G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 460 (461)
.|+.+ ++++|||+|++|+++.| ++.++.+|++++|++||..+.-+.+++++.
T Consensus 461 vKli~~~~~t~~ILGa~ivG~~A~ElI~~~alAi~~~~t~~dl~~~i~~HPTlsE~ 516 (542)
T 4b1b_A 461 AKLVCLKNEDNRVIGFHYVGPNAGEVTQGMALALRLKVKKKDFDNCIGIHPTDAES 516 (542)
T ss_dssp EEEEEETTTTTBEEEEEEESTTHHHHHHHHHHHHHTCCBHHHHHHC----------
T ss_pred EEEEEEeCCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhccCCcCCCHHHH
Confidence 88765 47999999999999988 689999999999999988887777777654
No 31
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=3.9e-46 Score=379.19 Aligned_cols=395 Identities=18% Similarity=0.173 Sum_probs=281.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCC---CCCCcccccccCCC----CCCCCCC---ceeecC
Q 012545 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP---YERPALSKAYLFPE----GTARLPG---FHVCVG 71 (461)
Q Consensus 2 m~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~---~~~~~~~~~~~~~~----~~~~~~~---~~~~~~ 71 (461)
|+..+||+|||||+||++||..|++.|++ |+|||++.... +..+..++.++... .....+. +.....
T Consensus 1 M~~~~dvvIIGgG~aGl~aA~~l~~~g~~---V~lie~~~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~ 77 (467)
T 1zk7_A 1 MEPPVQVAVIGSGGAAMAAALKAVEQGAQ---VTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVP 77 (467)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSTTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCC
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCE---EEEEeCCCCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCC
Confidence 44679999999999999999999999876 99999984210 00000011100000 0000000 000000
Q ss_pred CCCC----------------CCCHhHHHHc-CcEEEcCCeEEEEeCCCCEEEcCCC--cEEecCEEEEccCCCccccccc
Q 012545 72 SGGE----------------RLLPEWYKEK-GIELILSTEIVRADIASKTLLSATG--LIFKYQILVIATGSTVSITSLT 132 (461)
Q Consensus 72 ~~~~----------------~~~~~~~~~~-~v~~~~~~~v~~i~~~~~~v~~~~~--~~~~~d~liiAtG~~~~~~~~~ 132 (461)
.... ....+++++. +++++.+ ++..++.....+.+.+| +++.||++|+|||++|.+|++|
T Consensus 78 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~i~ 156 (467)
T 1zk7_A 78 TIDRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHG-EARFKDDQSLTVRLNEGGERVVMFDRCLVATGASPAVPPIP 156 (467)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEE-EEEEEETTEEEEEETTSSEEEEECSEEEECCCEEECCCCCT
T ss_pred ccCHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEE-EEEEccCCEEEEEeCCCceEEEEeCEEEEeCCCCCCCCCCC
Confidence 0000 0123455566 9999987 67778766556666777 6799999999999999766655
Q ss_pred cccccCccccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHC
Q 012545 133 SIRSKHCLCCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKIN 212 (461)
Q Consensus 133 g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~ 212 (461)
|+. ...++ +..++..+ . ..+++++|||+|++|+|+|..|.+.
T Consensus 157 G~~------------------------------~~~~~---~~~~~~~~----~-~~~~~vvViGgG~~g~E~A~~l~~~ 198 (467)
T 1zk7_A 157 GLK------------------------------ESPYW---TSTEALAS----D-TIPERLAVIGSSVVALELAQAFARL 198 (467)
T ss_dssp TTT------------------------------TSCCB---CHHHHHHC----S-SCCSEEEEECCSHHHHHHHHHHHHT
T ss_pred CCC------------------------------cCcee---cHHHHhcc----c-ccCCEEEEECCCHHHHHHHHHHHHc
Confidence 542 22222 33333332 1 1478999999999999999999999
Q ss_pred CCcEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCCh
Q 012545 213 NIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 292 (461)
Q Consensus 213 g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~ 292 (461)
|.+|+++++.+++++ +++++.+.+.+.+++.||+++++++|++++. ++....+.++ +.++++|.||+|+|++|++
T Consensus 199 g~~Vtlv~~~~~~l~--~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~--~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~ 273 (467)
T 1zk7_A 199 GSKVTVLARNTLFFR--EDPAIGEAVTAAFRAEGIEVLEHTQASQVAH--MDGEFVLTTT-HGELRADKLLVATGRTPNT 273 (467)
T ss_dssp TCEEEEECSSCTTTT--SCHHHHHHHHHHHHHTTCEEETTCCEEEEEE--ETTEEEEEET-TEEEEESEEEECSCEEESC
T ss_pred CCEEEEEEECCccCC--CCHHHHHHHHHHHHhCCCEEEcCCEEEEEEE--eCCEEEEEEC-CcEEEcCEEEECCCCCcCC
Confidence 999999999999988 7999999999999999999999999999986 3333456776 4589999999999999998
Q ss_pred hhh---hccccc-CCCcEEeCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCcccCC
Q 012545 293 SLF---KGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGY 368 (461)
Q Consensus 293 ~~~---~~~~~~-~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~ 368 (461)
+++ ..++.. .+|+|.||+++||+.|+|||+|||+..+ ..+..|..||+.||.||++.. ....+
T Consensus 274 ~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~---~~~~~ 340 (467)
T 1zk7_A 274 RSLALDAAGVTVNAQGAIVIDQGMRTSNPNIYAAGDCTDQP----------QFVYVAAAAGTRAAINMTGGD---AALDL 340 (467)
T ss_dssp TTSCGGGGTCCBCTTSCBCCCTTCBCSSTTEEECSTTBSSC----------CCHHHHHHHHHHHHHHHTTCC---CCCCC
T ss_pred CcCCchhcCCcCCCCCCEEECCCcccCCCCEEEEeccCCCc----------ccHHHHHHHHHHHHHHHcCCC---cccCC
Confidence 743 345655 4688999999999999999999999875 357789999999999998752 12456
Q ss_pred CCCCeEEEecCCcceEEccCCC------CcEEEecC-----Cccc---cCCCcEEEEEEe--CCEEEEEEEecCCHHH-H
Q 012545 369 DYLPYFYSRAFDLSWQFYGDNV------GDTVLFGD-----NDLA---SATHKFGTYWIK--DGKVVGVFLESGTPEE-N 431 (461)
Q Consensus 369 ~~~p~~~~~~~~~~~~~~g~~~------~~~~~~~~-----~~~~---~~~~~~~~~~~~--~~~i~G~~~~g~~~~~-~ 431 (461)
..+|++....+ .+..+|.++ |..+.... .... ....+|.|++++ +|+|+|++++|+.+.+ +
T Consensus 341 ~~~p~~~~~~~--~~a~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~a~~~i 418 (467)
T 1zk7_A 341 TAMPAVVFTDP--QVATVGYSEAEAHHDGIETDSRTLTLDNVPRALANFDTRGFIKLVIEEGSHRLIGVQAVAPEAGELI 418 (467)
T ss_dssp TTCEEEECSSS--EEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHH
T ss_pred CCCCEEEecCC--ceEEEecCHHHHHhcCCCeEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHH
Confidence 67787655444 444456553 22222211 1111 235678998884 8999999999999877 6
Q ss_pred HHHHHHHHcCCCCCChhhhhccCCCcc
Q 012545 432 KAIAKVARVQPSVESLDVLKNEGLSFA 458 (461)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~l~~~~~~~~ 458 (461)
+.++.+|+++++++|+..+.-+.++++
T Consensus 419 ~~~~~~i~~~~~~~~l~~~~~~~pt~~ 445 (467)
T 1zk7_A 419 QTAALAIRNRMTVQELADQLFPYLTMV 445 (467)
T ss_dssp HHHHHHHHTTCBHHHHHTSCCCTTSTT
T ss_pred HHHHHHHHCCCCHHHHhcCccCCCCHH
Confidence 899999999999888666555555544
No 32
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=1.8e-45 Score=374.33 Aligned_cols=395 Identities=23% Similarity=0.289 Sum_probs=282.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCC----CCcccccccCCCC----------CCCCC------
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYE----RPALSKAYLFPEG----------TARLP------ 64 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~----~~~~~~~~~~~~~----------~~~~~------ 64 (461)
++||+|||||+||++||..|++.|++ |+|||+++..... .+..++.++.... ...++
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~---V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 78 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMK---TACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVT 78 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCe---EEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCc
Confidence 58999999999999999999999987 9999998643210 0111111111000 00000
Q ss_pred -CceeecC------CCCCCCCHhHHHHcCcEEEcCCeEEEEeCCCCEEEcCCC--cEEecCEEEEccCCCcccccccccc
Q 012545 65 -GFHVCVG------SGGERLLPEWYKEKGIELILSTEIVRADIASKTLLSATG--LIFKYQILVIATGSTVSITSLTSIR 135 (461)
Q Consensus 65 -~~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~--~~~~~d~liiAtG~~~~~~~~~g~~ 135 (461)
.+..... ........+++++.+++++.++. ..++.....+.+.+| +++.||++|+|||++|.+|++||
T Consensus 79 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~-~~i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~p~~~g-- 155 (468)
T 2qae_A 79 MDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEG-SFETAHSIRVNGLDGKQEMLETKKTIIATGSEPTELPFLP-- 155 (468)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEE-EEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCBTTBC--
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEE-EEeeCCEEEEEecCCceEEEEcCEEEECCCCCcCCCCCCC--
Confidence 0000000 00000123456678999999854 456665455666677 67999999999999995544433
Q ss_pred ccCccccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCc
Q 012545 136 SKHCLCCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNID 215 (461)
Q Consensus 136 ~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~ 215 (461)
.+..+++ +..++..+. ..+++++|||+|++|+|+|..|.+.|.+
T Consensus 156 ----------------------------~~~~~v~---t~~~~~~~~-----~~~~~vvViGgG~~g~E~A~~l~~~g~~ 199 (468)
T 2qae_A 156 ----------------------------FDEKVVL---SSTGALALP-----RVPKTMVVIGGGVIGLELGSVWARLGAE 199 (468)
T ss_dssp ----------------------------CCSSSEE---CHHHHHTCS-----SCCSEEEEECCSHHHHHHHHHHHHTTCE
T ss_pred ----------------------------CCcCcee---chHHHhhcc-----cCCceEEEECCCHHHHHHHHHHHHhCCE
Confidence 3323444 334443321 1478999999999999999999999999
Q ss_pred EEEEccCCccCCcccCHHHHHHHHHHH-HhcCcEEEcCCcEEEEEecCCCCEEEEEeC--CC--cEEecCEEEEccCCCC
Q 012545 216 VSMVYPEPWCMPRLFTADIAAFYEGYY-ANKGIKIIKGTVAVGFTTNADGEVKEVKLK--DG--RTLEADIVVVGVGGRP 290 (461)
Q Consensus 216 Vtli~~~~~~~~~~~~~~~~~~~~~~l-~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~--~G--~~i~aD~vi~a~G~~p 290 (461)
|+++++.+++++. +++++.+.+.+.+ ++.||+++++++|++++.++++ ..+.+. +| +++++|.||+|+|++|
T Consensus 200 Vtlv~~~~~~l~~-~d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~~~g~~~~i~~D~vv~a~G~~p 276 (468)
T 2qae_A 200 VTVVEFAPRCAPT-LDEDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDS--VSLEVEGKNGKRETVTCEALLVSVGRRP 276 (468)
T ss_dssp EEEECSSSSSSTT-SCHHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSS--EEEEEECC---EEEEEESEEEECSCEEE
T ss_pred EEEEecCCccccc-CCHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCe--EEEEEEcCCCceEEEECCEEEECCCccc
Confidence 9999999999986 8999999999999 9999999999999999874333 345554 66 6899999999999999
Q ss_pred Chhh--h-hccccc-CCCcEEeCCCCCCCCCCEEEeCcccc-cCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCcc
Q 012545 291 LISL--F-KGQVAE-NKGGIETDDFFKTSADDVYAVGDVAT-FPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTV 365 (461)
Q Consensus 291 ~~~~--~-~~~~~~-~~g~i~vd~~~~t~~~~vya~GD~~~-~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~ 365 (461)
++++ + ..++.. ++|+|.||+++||+.|+|||+|||+. .+ ..+..|..||+.||.||++.. ..
T Consensus 277 ~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~----------~~~~~A~~~g~~aa~~i~~~~---~~ 343 (468)
T 2qae_A 277 FTGGLGLDKINVAKNERGFVKIGDHFETSIPDVYAIGDVVDKGP----------MLAHKAEDEGVACAEILAGKP---GH 343 (468)
T ss_dssp CCTTSCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECGGGBSSSC----------SCHHHHHHHHHHHHHHHTTCC---CC
T ss_pred CCCCCCchhcCCccCCCCCEeECCCcccCCCCEEEeeccCCCCC----------ccHhHHHHHHHHHHHHHcCCC---cc
Confidence 9986 3 345665 46889999999999999999999998 44 467789999999999999743 12
Q ss_pred cCCCCCCeEEEecCCcceEEccCCC------CcEEEecC-----Cccc---cCCCcEEEEEEe--CCEEEEEEEecCCHH
Q 012545 366 TGYDYLPYFYSRAFDLSWQFYGDNV------GDTVLFGD-----NDLA---SATHKFGTYWIK--DGKVVGVFLESGTPE 429 (461)
Q Consensus 366 ~~~~~~p~~~~~~~~~~~~~~g~~~------~~~~~~~~-----~~~~---~~~~~~~~~~~~--~~~i~G~~~~g~~~~ 429 (461)
..|..+|++.++.+ .+..+|.++ |..+.... .... ....+|.|++++ +|+|+|++++|+.+.
T Consensus 344 ~~~~~~p~~~~~~~--~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~a~ 421 (468)
T 2qae_A 344 VNYGVIPAVIYTMP--EVASVGKSEDELKKEGVAYKVGKFPFNANSRAKAVSTEDGFVKVLVDKATDRILGVHIVCTTAG 421 (468)
T ss_dssp CCTTSCCEEECSSS--EEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHH
T ss_pred CCCCCCCEEEECCC--ceEEEeCCHHHHHhcCCCEEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHH
Confidence 45667787655444 455557654 22222211 1111 235679998884 899999999999987
Q ss_pred H-HHHHHHHHHcCCCCCChhhhhccCCCccc
Q 012545 430 E-NKAIAKVARVQPSVESLDVLKNEGLSFAS 459 (461)
Q Consensus 430 ~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 459 (461)
+ ++.++.+|+++++++|+..+.-+.++|.+
T Consensus 422 e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e 452 (468)
T 2qae_A 422 ELIGEACLAMEYGASSEDVGRTCHAHPTMSE 452 (468)
T ss_dssp HHHHHHHHHHHTTCBHHHHHTSCCCSSCTHH
T ss_pred HHHHHHHHHHHCCCCHHHHhhcccCCCCHHH
Confidence 7 69999999999999988877666666654
No 33
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=6.1e-46 Score=380.63 Aligned_cols=396 Identities=19% Similarity=0.193 Sum_probs=286.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHc---CCCCCcEEEEeCCCCCC---CCCCcccccccCC---------CCCCCCCCceee
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQ---GVKPGELAIISKEAVAP---YERPALSKAYLFP---------EGTARLPGFHVC 69 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~---g~~~~~V~vie~~~~~~---~~~~~~~~~~~~~---------~~~~~~~~~~~~ 69 (461)
.+||||||||+||++||..|++. |++ |+|||+++... ...+..++.++.. .....++.+...
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~---V~liE~~~~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~ 78 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQ---VTVIDCDGIGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDD 78 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEE---EEEEESSCTTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC-----
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCE---EEEEeCCCcCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCC
Confidence 48999999999999999999998 776 99999986210 0001111211110 000111100000
Q ss_pred cCCC--------------CCCCCHhHHHHcCcEEEcCCeEEEEeCC----CC--EEEcCCCc--EEecCEEEEccCCCcc
Q 012545 70 VGSG--------------GERLLPEWYKEKGIELILSTEIVRADIA----SK--TLLSATGL--IFKYQILVIATGSTVS 127 (461)
Q Consensus 70 ~~~~--------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~----~~--~v~~~~~~--~~~~d~liiAtG~~~~ 127 (461)
.... ......+++++.+++++.+ .+..++.+ .+ .+...+++ ++.||++|+|||++|.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p~ 157 (499)
T 1xdi_A 79 AKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAG-RGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPR 157 (499)
T ss_dssp -CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-EEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEEC
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCCC
Confidence 0000 0001245567789999998 47777762 13 35555665 7999999999999996
Q ss_pred ccccccccccCccccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHH
Q 012545 128 ITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSA 207 (461)
Q Consensus 128 ~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~ 207 (461)
+|++||+ +..++++..+..+.. ..+++++|||+|++|+|+|.
T Consensus 158 ~p~i~g~------------------------------~~~~v~~~~~~~~~~--------~~~~~vvViGgG~ig~E~A~ 199 (499)
T 1xdi_A 158 ILPSAQP------------------------------DGERILTWRQLYDLD--------ALPDHLIVVGSGVTGAEFVD 199 (499)
T ss_dssp CCGGGCC------------------------------CSSSEEEGGGGGGCS--------SCCSSEEEESCSHHHHHHHH
T ss_pred CCCCCCC------------------------------CcCcEEehhHhhhhh--------ccCCeEEEECCCHHHHHHHH
Confidence 6555543 333455544333211 14789999999999999999
Q ss_pred HHHHCCCcEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccC
Q 012545 208 ALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVG 287 (461)
Q Consensus 208 ~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G 287 (461)
.|.+.|.+|+++++.+++++. +++++.+.+.+.+++.||+++++++|++++.++ +. ..+++.+|+++++|.||+|+|
T Consensus 200 ~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~-~~-v~v~~~~g~~i~aD~Vv~a~G 276 (499)
T 1xdi_A 200 AYTELGVPVTVVASQDHVLPY-EDADAALVLEESFAERGVRLFKNARAASVTRTG-AG-VLVTMTDGRTVEGSHALMTIG 276 (499)
T ss_dssp HHHHTTCCEEEECSSSSSSCC-SSHHHHHHHHHHHHHTTCEEETTCCEEEEEECS-SS-EEEEETTSCEEEESEEEECCC
T ss_pred HHHHcCCeEEEEEcCCccccc-cCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC-CE-EEEEECCCcEEEcCEEEECCC
Confidence 999999999999999999987 899999999999999999999999999998733 33 467788898999999999999
Q ss_pred CCCChhh--hh-ccccc-CCCcEEeCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCC
Q 012545 288 GRPLISL--FK-GQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGK 363 (461)
Q Consensus 288 ~~p~~~~--~~-~~~~~-~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~ 363 (461)
++|++++ ++ .++.. .+|+|.||+++||+.|+|||+|||++.+ ..+..|..||+.||.||++...
T Consensus 277 ~~p~~~~l~l~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~----------~l~~~A~~~g~~aa~~i~g~~~-- 344 (499)
T 1xdi_A 277 SVPNTSGLGLERVGIQLGRGNYLTVDRVSRTLATGIYAAGDCTGLL----------PLASVAAMQGRIAMYHALGEGV-- 344 (499)
T ss_dssp EEECCSSSCTTTTTCCCBTTTBCCCCSSSBCSSTTEEECSGGGTSC----------SCHHHHHHHHHHHHHHHTTCCC--
T ss_pred CCcCCCcCCchhcCceECCCCCEEECCCcccCCCCEEEEeccCCCc----------ccHHHHHHHHHHHHHHhcCCCC--
Confidence 9999987 43 35665 4688999999999999999999999865 4577899999999999997521
Q ss_pred cccCCCCCCeEEEecCCcceEEccCCC------CcEEEec-----CCccc---cCCCcEEEEEEe--CCEEEEEEEecCC
Q 012545 364 TVTGYDYLPYFYSRAFDLSWQFYGDNV------GDTVLFG-----DNDLA---SATHKFGTYWIK--DGKVVGVFLESGT 427 (461)
Q Consensus 364 ~~~~~~~~p~~~~~~~~~~~~~~g~~~------~~~~~~~-----~~~~~---~~~~~~~~~~~~--~~~i~G~~~~g~~ 427 (461)
....|..+|+++++.+ .+..+|.++ |..+... ..... ....+|.|++++ +|+|+|++++|+.
T Consensus 345 ~~~~~~~~p~~~~~~~--~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~~~~~~~~~ilG~~~~g~~ 422 (499)
T 1xdi_A 345 SPIRLRTVAATVFTRP--EIAAVGVPQSVIDAGSVAARTIMLPLRTNARAKMSEMRHGFVKIFCRRSTGVVIGGVVVAPI 422 (499)
T ss_dssp CCCCGGGCEEEECSSS--EEEEEESCHHHHHHTSSCEEEEEEESTTSHHHHHTTCSSCEEEEEEETTTCBEEEEEEEETT
T ss_pred ccCCCCCCcEEEEecC--CceEeCCCHHHHHhCCCCEEEEEEecCcccceeecCCCceEEEEEEECCCCEEEEEEEECCc
Confidence 1245677888665444 445557654 2222221 11111 235679998884 7999999999999
Q ss_pred HHH-HHHHHHHHHcCCCCCChhhhhccCCCccc
Q 012545 428 PEE-NKAIAKVARVQPSVESLDVLKNEGLSFAS 459 (461)
Q Consensus 428 ~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 459 (461)
+.+ ++.++.+|+++++++|+..+.-+.++|++
T Consensus 423 a~~~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e 455 (499)
T 1xdi_A 423 ASELILPIAVAVQNRITVNELAQTLAVYPSLSG 455 (499)
T ss_dssp HHHHHHHHHHHHHHTCBHHHHHTSBCCSSSTHH
T ss_pred hHHHHHHHHHHHHCCCCHHHHhcccccCCCchH
Confidence 888 68999999999999998877666666654
No 34
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=3.5e-46 Score=379.20 Aligned_cols=398 Identities=16% Similarity=0.159 Sum_probs=286.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCC----CCCcccccccCCC----------CCCCCCCcee
Q 012545 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPY----ERPALSKAYLFPE----------GTARLPGFHV 68 (461)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~----~~~~~~~~~~~~~----------~~~~~~~~~~ 68 (461)
++.+||+|||||+||++||..|++.|++ |+|||+.+.... ..+..++.++... .......+..
T Consensus 2 ~~~~DVvVIGgG~aGl~aA~~l~~~G~~---V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~ 78 (466)
T 3l8k_A 2 SLKYDVVVIGAGGAGYHGAFRLAKAKYN---VLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFST 78 (466)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHH
T ss_pred CccceEEEECCCHHHHHHHHHHHhCCCe---EEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHH
Confidence 3469999999999999999999999987 999997754321 0111111111000 0000000000
Q ss_pred ecCC--C---CC--CCCHhHHHHcCcEEEcCCeEEEEeCCCCEEEcCCCcE--EecCEEEEccCCCccccccccccccCc
Q 012545 69 CVGS--G---GE--RLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLI--FKYQILVIATGSTVSITSLTSIRSKHC 139 (461)
Q Consensus 69 ~~~~--~---~~--~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~--~~~d~liiAtG~~~~~~~~~g~~~~~~ 139 (461)
.... . .. .....++++.+++++.+ ++..++.....|...++++ +.||++|+|||+.|.+|++||+.
T Consensus 79 ~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~---- 153 (466)
T 3l8k_A 79 VQDRKDYVQELRFKQHKRNMSQYETLTFYKG-YVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAETAKLRLPGVE---- 153 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCTTEEEESE-EEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCCCCTTGG----
T ss_pred HHHHHHhheeccccchHHHHHHhCCCEEEEe-EEEEecCCeEEEEcCCCcEEEEecCEEEECCCCCccCCCCCCcc----
Confidence 0000 0 00 11222344578999998 7888887766777788887 99999999999999776666642
Q ss_pred cccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEE
Q 012545 140 LCCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMV 219 (461)
Q Consensus 140 ~~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli 219 (461)
++ .+..++..+.+.+.. .+++++|||+|++|+|+|..|++.|.+|+++
T Consensus 154 ----------------------------~~---~t~~~~~~~~~~l~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv 201 (466)
T 3l8k_A 154 ----------------------------YC---LTSDDIFGYKTSFRK-LPQDMVIIGAGYIGLEIASIFRLMGVQTHII 201 (466)
T ss_dssp ----------------------------GS---BCHHHHHSTTCSCCS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred ----------------------------ce---EeHHHHHHHHHHHhh-CCCeEEEECCCHHHHHHHHHHHHcCCEEEEE
Confidence 11 223333322111211 4789999999999999999999999999999
Q ss_pred ccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeC--CCc--EEecCEEEEccCCCCChhh-
Q 012545 220 YPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK--DGR--TLEADIVVVGVGGRPLISL- 294 (461)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~--~G~--~i~aD~vi~a~G~~p~~~~- 294 (461)
++.+++++..+++++.+.+.+.++ |+++++++|++++.++++. ..+.+. +|+ ++++|.||+|+|++|++++
T Consensus 202 ~~~~~~l~~~~d~~~~~~l~~~l~---v~i~~~~~v~~i~~~~~~~-v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~l~ 277 (466)
T 3l8k_A 202 EMLDRALITLEDQDIVNTLLSILK---LNIKFNSPVTEVKKIKDDE-YEVIYSTKDGSKKSIFTNSVVLAAGRRPVIPEG 277 (466)
T ss_dssp CSSSSSCTTSCCHHHHHHHHHHHC---CCEECSCCEEEEEEEETTE-EEEEECCTTSCCEEEEESCEEECCCEEECCCTT
T ss_pred EeCCcCCCCCCCHHHHHHHHhcCE---EEEEECCEEEEEEEcCCCc-EEEEEEecCCceEEEEcCEEEECcCCCcccccc
Confidence 999999987449999999988887 9999999999998733133 357777 676 8999999999999999983
Q ss_pred -hhccccc-CCCcEEeCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcc--cCCCcccCCCC
Q 012545 295 -FKGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMAT--EGGKTVTGYDY 370 (461)
Q Consensus 295 -~~~~~~~-~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~--~~~~~~~~~~~ 370 (461)
...++.. ++| |.||+++||+.|+|||+|||++.+ +.+..|..||+.||.||++. .. ....+..
T Consensus 278 l~~~gl~~~~~G-i~vd~~~~t~~~~Iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~--~~~~~~~ 344 (466)
T 3l8k_A 278 AREIGLSISKTG-IVVDETMKTNIPNVFATGDANGLA----------PYYHAAVRMSIAAANNIMANGMPV--DYVDVKS 344 (466)
T ss_dssp TGGGTCCBCSSS-BCCCTTCBCSSTTEEECGGGTCSC----------CSHHHHHHHHHHHHHHHHTTTSCC--CCCCSTT
T ss_pred hhhcCceeCCCC-EeECCCccCCCCCEEEEEecCCCC----------ccHhHHHHHHHHHHHHHhCCCCCc--cccCCCC
Confidence 3456666 466 999999999999999999999874 56888999999999999975 32 1246777
Q ss_pred CCeEEEecCCcceEEccCCC------CcEEEe-----cCCccc---cCCCcEEEEEE--eCCEEEEEEEecCCHHH-HHH
Q 012545 371 LPYFYSRAFDLSWQFYGDNV------GDTVLF-----GDNDLA---SATHKFGTYWI--KDGKVVGVFLESGTPEE-NKA 433 (461)
Q Consensus 371 ~p~~~~~~~~~~~~~~g~~~------~~~~~~-----~~~~~~---~~~~~~~~~~~--~~~~i~G~~~~g~~~~~-~~~ 433 (461)
+|+.+++.+++. .+|.++ |..+.. .+...+ ....+|.|+++ ++|+|||+|++|+++.+ ++.
T Consensus 345 ~p~~~~~~~~~a--~vG~te~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~ 422 (466)
T 3l8k_A 345 IPVTIYTIPSLS--YVGILPSKARKMGIEIVEAEYNMEEDVSAQIYGQKEGVLKLIFERGSMRLIGAWMIGVHSQYLINE 422 (466)
T ss_dssp SCEEECSSSCEE--EEECCHHHHHHHTCCEEEEEEEGGGSHHHHHHTCCCCEEEEEEETTTCBEEEEEEESTTHHHHHHH
T ss_pred CcEEEECCCCeE--EecCCHHHHHhCCCCEEEEEEEcccChhheecCCCeEEEEEEEECCCCEEEEEEEECCCHHHHHHH
Confidence 887766555554 446554 222222 111111 24678999888 46999999999999888 689
Q ss_pred HHHHHHcCCCCCChhhhhccCCCccc
Q 012545 434 IAKVARVQPSVESLDVLKNEGLSFAS 459 (461)
Q Consensus 434 ~~~~~~~~~~~~~~~~l~~~~~~~~~ 459 (461)
++.+|++++|++||..+.-+.+++++
T Consensus 423 ~~~ai~~~~t~~~l~~~~~~~Pt~~e 448 (466)
T 3l8k_A 423 LGLAVAYGLNAKQLASFAEQHPSTNE 448 (466)
T ss_dssp HHHHHHTTCBHHHHHHCCCCTTSTTH
T ss_pred HHHHHHCcCCHHHHhccccCCCChHH
Confidence 99999999999999988888887765
No 35
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=2.1e-45 Score=375.21 Aligned_cols=394 Identities=21% Similarity=0.237 Sum_probs=286.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCC---CCCCcccccccCCCC----CCCCCCceeecCC----
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP---YERPALSKAYLFPEG----TARLPGFHVCVGS---- 72 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~---- 72 (461)
..+||+|||||++|++||..|+++|++ |+|||++.... +..|..++.++.... ....+.+......
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~---V~liEk~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 101 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKR---VAIAEEYRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFN 101 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEEC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCE---EEEEeCCCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccC
Confidence 468999999999999999999999987 99999954211 000111111110000 0000000000000
Q ss_pred -------------CCCCCCHhHHHHcCcEEEcCCeEEEEeCCCCEEEcC-CCcEEecCEEEEccCCCcc-cccccccccc
Q 012545 73 -------------GGERLLPEWYKEKGIELILSTEIVRADIASKTLLSA-TGLIFKYQILVIATGSTVS-ITSLTSIRSK 137 (461)
Q Consensus 73 -------------~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~-~~~~~~~d~liiAtG~~~~-~~~~~g~~~~ 137 (461)
........++++.+++++.+ .+..++ .+.+.+. +++.+.||++|+|||+.|. +|.+||...
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~i~--~~~v~v~~~~~~~~~d~lviAtG~~p~~~p~i~G~~~- 177 (484)
T 3o0h_A 102 WEKLVAAKNKEISRLEGLYREGLQNSNVHIYES-RAVFVD--EHTLELSVTGERISAEKILIATGAKIVSNSAIKGSDL- 177 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEEEE--TTEEEETTTCCEEEEEEEEECCCEEECCC--CBTGGG-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEee--CCEEEEecCCeEEEeCEEEEccCCCcccCCCCCCccc-
Confidence 00011234456679999998 666665 4567765 6778999999999999997 777777531
Q ss_pred CccccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEE
Q 012545 138 HCLCCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVS 217 (461)
Q Consensus 138 ~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vt 217 (461)
+++..++.... ..+++++|+|+|++|+|+|..+.+.|.+|+
T Consensus 178 -------------------------------~~~~~~~~~~~--------~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt 218 (484)
T 3o0h_A 178 -------------------------------CLTSNEIFDLE--------KLPKSIVIVGGGYIGVEFANIFHGLGVKTT 218 (484)
T ss_dssp -------------------------------SBCTTTGGGCS--------SCCSEEEEECCSHHHHHHHHHHHHTTCEEE
T ss_pred -------------------------------cccHHHHHhHH--------hcCCcEEEECcCHHHHHHHHHHHHcCCeEE
Confidence 01111111100 147899999999999999999999999999
Q ss_pred EEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChhhh--
Q 012545 218 MVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLF-- 295 (461)
Q Consensus 218 li~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~~~-- 295 (461)
++++.+++++. +++++.+.+.+.+++.||+++++++|++++.++ +. ..+++.+|+++++|.||+|+|++|+..++
T Consensus 219 li~~~~~~l~~-~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~-~~-v~v~~~~g~~i~aD~Vi~A~G~~p~~~~l~l 295 (484)
T 3o0h_A 219 LLHRGDLILRN-FDYDLRQLLNDAMVAKGISIIYEATVSQVQSTE-NC-YNVVLTNGQTICADRVMLATGRVPNTTGLGL 295 (484)
T ss_dssp EECSSSSSSTT-SCHHHHHHHHHHHHHHTCEEESSCCEEEEEECS-SS-EEEEETTSCEEEESEEEECCCEEECCTTCCH
T ss_pred EEECCCccccc-cCHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeC-CE-EEEEECCCcEEEcCEEEEeeCCCcCCCCCCh
Confidence 99999998887 799999999999999999999999999998733 33 47889999999999999999999999853
Q ss_pred -hccccc-CCCcEEeCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCcccCCCCCCe
Q 012545 296 -KGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPY 373 (461)
Q Consensus 296 -~~~~~~-~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~ 373 (461)
..++.. ++|+|.||+++||+.|+|||+|||++.+ ..+..|..||+.||.||++.... ...|..+|+
T Consensus 296 ~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~--~~~~~~~p~ 363 (484)
T 3o0h_A 296 ERAGVKVNEFGAVVVDEKMTTNVSHIWAVGDVTGHI----------QLTPVAIHDAMCFVKNAFENTST--TPDYDLITT 363 (484)
T ss_dssp HHHTCCBCTTSCBCCCTTSBCSSTTEEECGGGGTSC----------CCHHHHHHHHHHHHHHHHC---C--CCCCTTCCE
T ss_pred hhcCceECCCCCEeECCCCCCCCCCEEEEEecCCCC----------cCHHHHHHHHHHHHHHHcCCCCC--cCCCCCCcE
Confidence 455666 5788999999999999999999999854 56788999999999999975422 256778898
Q ss_pred EEEecCCcceEEccCCC------CcEEEecCCc-----cc---cCCCcEEEEEE--eCCEEEEEEEecCCHHH-HHHHHH
Q 012545 374 FYSRAFDLSWQFYGDNV------GDTVLFGDND-----LA---SATHKFGTYWI--KDGKVVGVFLESGTPEE-NKAIAK 436 (461)
Q Consensus 374 ~~~~~~~~~~~~~g~~~------~~~~~~~~~~-----~~---~~~~~~~~~~~--~~~~i~G~~~~g~~~~~-~~~~~~ 436 (461)
.+++.+++..+ |.++ |..+.....+ .+ ....+|.|+++ ++++|||+|++|+++.+ ++.++.
T Consensus 364 ~~~~~p~~a~v--Glte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ 441 (484)
T 3o0h_A 364 AVFSQPEIGTV--GLSEEDALHRYKRVEIYRTVFRPMRNVLSGSPEKMFMKLVVDGESRIVVGAHVLGENAGEIAQLIGI 441 (484)
T ss_dssp EECCSSCEEEE--ECCHHHHHHHCSEEEEEEEEECCHHHHHHTCCCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHH
T ss_pred EEECCCCEEEe--eCCHHHHHHcCCCEEEEEecCCcchhhccCCCCcEEEEEEEECCCCEEEEEEEECcCHHHHHHHHHH
Confidence 77766655544 6554 3222221111 10 23568888887 57999999999999988 689999
Q ss_pred HHHcCCCCCChhhhhccCCCcccC
Q 012545 437 VARVQPSVESLDVLKNEGLSFASK 460 (461)
Q Consensus 437 ~~~~~~~~~~~~~l~~~~~~~~~~ 460 (461)
+|+.+++++|+..+.-+.+++++.
T Consensus 442 ai~~~~t~~~l~~~~~~hPt~~e~ 465 (484)
T 3o0h_A 442 SLKGKLTKDIFDKTMAVHPTMSEE 465 (484)
T ss_dssp HHHTTCBHHHHHHSCCCSSCSGGG
T ss_pred HHHCCCCHHHHhccccCCCChHHH
Confidence 999999999998888777777654
No 36
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=8.4e-46 Score=378.27 Aligned_cols=395 Identities=19% Similarity=0.236 Sum_probs=283.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHH-cCCCCCcEEEEe---------CCCCCC---CCCCcccccccCCCCC----CCCCCc
Q 012545 4 KSFKYVILGGGVSAGYAAREFAK-QGVKPGELAIIS---------KEAVAP---YERPALSKAYLFPEGT----ARLPGF 66 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~-~g~~~~~V~vie---------~~~~~~---~~~~~~~~~~~~~~~~----~~~~~~ 66 (461)
..+||+|||||+||++||..|++ .|++ |+||| ++.... +..|..++.++..... ...+.+
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~---V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~ 78 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKR---VAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGF 78 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCC---EEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGG
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCE---EEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhc
Confidence 46899999999999999999999 9987 99999 332110 0001111111110000 000000
Q ss_pred eeecC-----CCC--------------CCCCHhHHHHc-CcEEEcCCeEEEEeCCCCEEEcC-----CC---cEEecCEE
Q 012545 67 HVCVG-----SGG--------------ERLLPEWYKEK-GIELILSTEIVRADIASKTLLSA-----TG---LIFKYQIL 118 (461)
Q Consensus 67 ~~~~~-----~~~--------------~~~~~~~~~~~-~v~~~~~~~v~~i~~~~~~v~~~-----~~---~~~~~d~l 118 (461)
..... .+. .......+++. +++++.+ .+..++. +++.+. ++ +++.||+|
T Consensus 79 g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g-~~~~i~~--~~v~v~~~~~~~g~~~~~~~~d~l 155 (490)
T 1fec_A 79 GWELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQG-FGALQDN--HTVLVRESADPNSAVLETLDTEYI 155 (490)
T ss_dssp TEECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEES-EEEEEET--TEEEEESSSSTTSCEEEEEEEEEE
T ss_pred CcccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEe-EEEEeeC--CEEEEEeeccCCCCceEEEEcCEE
Confidence 00000 000 00112234567 9999998 5777764 455552 56 67999999
Q ss_pred EEccCCCccccccccccccCccccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECC
Q 012545 119 VIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGG 198 (461)
Q Consensus 119 iiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~ 198 (461)
|+|||++|.+|.+||.. .+ .+.+++..+ ...+++++|||+
T Consensus 156 viAtGs~p~~p~i~g~~--------------------------------~~---~~~~~~~~~-----~~~~~~vvViGg 195 (490)
T 1fec_A 156 LLATGSWPQHLGIEGDD--------------------------------LC---ITSNEAFYL-----DEAPKRALCVGG 195 (490)
T ss_dssp EECCCEEECCCCSBTGG--------------------------------GC---BCHHHHTTC-----SSCCSEEEEECS
T ss_pred EEeCCCCCCCCCCCCcc--------------------------------ce---ecHHHHhhh-----hhcCCeEEEECC
Confidence 99999999776666642 11 122222221 114789999999
Q ss_pred CHHHHHHHHHHHHC---CCcEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCc
Q 012545 199 GYIGLELSAALKIN---NIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGR 275 (461)
Q Consensus 199 G~~g~e~a~~l~~~---g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~ 275 (461)
|++|+|+|..|.+. |.+|+++++.+++++. +++++.+.+.+.+++.||+++++++|++++.++++. ..|++++|+
T Consensus 196 G~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~-~~v~~~~G~ 273 (490)
T 1fec_A 196 GYISIEFAGIFNAYKARGGQVDLAYRGDMILRG-FDSELRKQLTEQLRANGINVRTHENPAKVTKNADGT-RHVVFESGA 273 (490)
T ss_dssp SHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTT-SCHHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSC-EEEEETTSC
T ss_pred CHHHHHHHHHHHhhccCcCeEEEEEcCCCcccc-cCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCE-EEEEECCCc
Confidence 99999999999999 9999999999999986 899999999999999999999999999998743333 478889998
Q ss_pred EEecCEEEEccCCCCChhh--h-hccccc-CCCcEEeCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHH
Q 012545 276 TLEADIVVVGVGGRPLISL--F-KGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQ 351 (461)
Q Consensus 276 ~i~aD~vi~a~G~~p~~~~--~-~~~~~~-~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~ 351 (461)
++++|.||+|+|++|+++. + ..++.. ++|+|.||+++||+.|+|||+|||++.+ +.+..|..||+.
T Consensus 274 ~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~I~Vd~~~~t~~~~IyA~GD~~~~~----------~l~~~A~~~g~~ 343 (490)
T 1fec_A 274 EADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDAYSKTNVDNIYAIGDVTDRV----------MLTPVAINEGAA 343 (490)
T ss_dssp EEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBCSSTTEEECGGGGCSC----------CCHHHHHHHHHH
T ss_pred EEEcCEEEEccCCCcCccccCchhcCccCCCCCCEEECCCCccCCCCEEEEeccCCCc----------cCHHHHHHHHHH
Confidence 9999999999999999973 3 345666 4789999999999999999999999753 578899999999
Q ss_pred HHHHHhcccCCCcccCCCCCCeEEEecCCcceEEccCCC------CcEEEec--CCcc------ccCCCcEE-EEEEe--
Q 012545 352 AVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV------GDTVLFG--DNDL------ASATHKFG-TYWIK-- 414 (461)
Q Consensus 352 aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~------~~~~~~~--~~~~------~~~~~~~~-~~~~~-- 414 (461)
||.||++... ....|..+|+..++.+++ ..+|.++ +..+... ...+ .....+|. |++++
T Consensus 344 aa~~i~g~~~--~~~~~~~~p~~~~~~~~~--a~vG~~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~ 419 (490)
T 1fec_A 344 FVDTVFANKP--RATDHTKVACAVFSIPPM--GVCGYVEEDAAKKYDQVAVYESSFTPLMHNISGSTYKKFMVRIVTNHA 419 (490)
T ss_dssp HHHHHHSSCC--CCCCCSSCCEEECCSSCE--EEEECCHHHHHHHCSEEEEEEEEECCHHHHHHSCTTCCEEEEEEEETT
T ss_pred HHHHhcCCCC--CcCCCCCccEEEECCCCe--EEEeCCHHHHHhcCCCEEEEEeecChhhhhhhcCCCeEEEEEEEEECC
Confidence 9999997532 235677788766555544 4456553 1122211 1111 12356799 98884
Q ss_pred CCEEEEEEEecCCHHH-HHHHHHHHHcCCCCCChhhhhccCCCcccC
Q 012545 415 DGKVVGVFLESGTPEE-NKAIAKVARVQPSVESLDVLKNEGLSFASK 460 (461)
Q Consensus 415 ~~~i~G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 460 (461)
+|+|||+|++|+.+.+ ++.++.+|+++++++|+..+.-+.+++.+.
T Consensus 420 ~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~ 466 (490)
T 1fec_A 420 DGEVLGVHMLGDSSPEIIQSVAICLKMGAKISDFYNTIGVHPTSAEE 466 (490)
T ss_dssp TTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGG
T ss_pred CCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhccccCCCCHHHH
Confidence 8999999999999888 689999999999999988877777777653
No 37
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=8.2e-46 Score=377.82 Aligned_cols=396 Identities=22% Similarity=0.247 Sum_probs=283.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCC----CC------CCcccccccCCCC-----CCCCCCcee
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP----YE------RPALSKAYLFPEG-----TARLPGFHV 68 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~----~~------~~~~~~~~~~~~~-----~~~~~~~~~ 68 (461)
+.|||+|||||+||++||..|++.|++ |+|||+++... +. .|..++.++.... ...+..+..
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~---V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~ 78 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLK---TALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGI 78 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCC---EEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTE
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCE---EEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 479999999999999999999999987 99999986211 00 0000111100000 000000000
Q ss_pred ecCCC-----------------CCCCCHhHHHHcCcEEEcCCeEEEEeCCCCEEEcCCC--cEEecCEEEEccCCCcccc
Q 012545 69 CVGSG-----------------GERLLPEWYKEKGIELILSTEIVRADIASKTLLSATG--LIFKYQILVIATGSTVSIT 129 (461)
Q Consensus 69 ~~~~~-----------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~--~~~~~d~liiAtG~~~~~~ 129 (461)
..... .......++++.+++++.+ .+..++.....+...++ +++.||++|+|||++|.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~-- 155 (476)
T 3lad_A 79 STGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEG-HGKLLAGKKVEVTAADGSSQVLDTENVILASGSKPV-- 155 (476)
T ss_dssp ECSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEES-EEEECSTTCEEEECTTSCEEEECCSCEEECCCEEEC--
T ss_pred ccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEecCCEEEEEcCCCceEEEEcCEEEEcCCCCCC--
Confidence 00000 0001123455679999998 45556655556666666 57899999999999983
Q ss_pred ccccccccCccccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHH
Q 012545 130 SLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAAL 209 (461)
Q Consensus 130 ~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l 209 (461)
.+| .++.+...+++..+..+ + ...+++++|||+|++|+|+|..|
T Consensus 156 -------------------------~~~---~~~~~~~~v~~~~~~~~---~-----~~~~~~v~ViGgG~~g~e~A~~l 199 (476)
T 3lad_A 156 -------------------------EIP---PAPVDQDVIVDSTGALD---F-----QNVPGKLGVIGAGVIGLELGSVW 199 (476)
T ss_dssp -------------------------CCT---TSCCCSSSEEEHHHHTS---C-----SSCCSEEEEECCSHHHHHHHHHH
T ss_pred -------------------------CCC---CCCCCcccEEechhhhc---c-----ccCCCeEEEECCCHHHHHHHHHH
Confidence 222 12233445665432221 1 12578999999999999999999
Q ss_pred HHCCCcEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCC---cEEecCEEEEcc
Q 012545 210 KINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDG---RTLEADIVVVGV 286 (461)
Q Consensus 210 ~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G---~~i~aD~vi~a~ 286 (461)
.+.|.+|+++++.+++++. +++++.+.+.+.+++.||+++++++|++++.++++ ..+.+.++ +++++|.||+|+
T Consensus 200 ~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~--~~v~~~~~~g~~~~~~D~vi~a~ 276 (476)
T 3lad_A 200 ARLGAEVTVLEAMDKFLPA-VDEQVAKEAQKILTKQGLKILLGARVTGTEVKNKQ--VTVKFVDAEGEKSQAFDKLIVAV 276 (476)
T ss_dssp HHTTCEEEEEESSSSSSTT-SCHHHHHHHHHHHHHTTEEEEETCEEEEEEECSSC--EEEEEESSSEEEEEEESEEEECS
T ss_pred HHcCCcEEEEecCCCcCcc-cCHHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCE--EEEEEEeCCCcEEEECCEEEEee
Confidence 9999999999999999986 89999999999999999999999999999874333 34666554 679999999999
Q ss_pred CCCCChhhh---hccccc-CCCcEEeCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCC
Q 012545 287 GGRPLISLF---KGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGG 362 (461)
Q Consensus 287 G~~p~~~~~---~~~~~~-~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 362 (461)
|++|+++.+ ..++.. ++|+|.||+++||+.|+|||+|||++.+ ..+..|..||+.||.||++...
T Consensus 277 G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~- 345 (476)
T 3lad_A 277 GRRPVTTDLLAADSGVTLDERGFIYVDDYCATSVPGVYAIGDVVRGA----------MLAHKASEEGVVVAERIAGHKA- 345 (476)
T ss_dssp CEEECCTTCCSSCCSCCBCTTSCBCCCTTSBCSSTTEEECGGGSSSC----------CCHHHHHHHHHHHHHHHHHCCC-
T ss_pred CCcccCCCCCccccCccccCCCCEeeCCCcccCCCCEEEEEccCCCc----------ccHHHHHHHHHHHHHHhcCCCc-
Confidence 999999753 345555 5788999999999999999999999765 4678899999999999997542
Q ss_pred CcccCCCCCCeEEEecCCcceEEccCCC------CcEEEecCCc-----cc---cCCCcEEEEEE--eCCEEEEEEEecC
Q 012545 363 KTVTGYDYLPYFYSRAFDLSWQFYGDNV------GDTVLFGDND-----LA---SATHKFGTYWI--KDGKVVGVFLESG 426 (461)
Q Consensus 363 ~~~~~~~~~p~~~~~~~~~~~~~~g~~~------~~~~~~~~~~-----~~---~~~~~~~~~~~--~~~~i~G~~~~g~ 426 (461)
...|..+|+..++.++ +..+|.++ |..+..+..+ .+ ..+.+|.|+++ ++|+|||+|++|+
T Consensus 346 --~~~~~~~p~~~~~~~~--~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~ 421 (476)
T 3lad_A 346 --QMNYDLIPAVIYTHPE--IAGVGKTEQALKAEGVAINVGVFPFAASGRAMAANDTAGFVKVIADAKTDRVLGVHVIGP 421 (476)
T ss_dssp --CCCTTCCCEEECSSSE--EEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTCBEEEEEEEET
T ss_pred --ccCCCCCCEEEECcCC--EEEeeCCHHHHHhcCCCEEEEEEeccccchheecCCCcEEEEEEEECCCCEEEEEEEECC
Confidence 2567778887655444 44556654 3223222211 11 23568999887 5799999999999
Q ss_pred CHHH-HHHHHHHHHcCCCCCChhhhhccCCCccc
Q 012545 427 TPEE-NKAIAKVARVQPSVESLDVLKNEGLSFAS 459 (461)
Q Consensus 427 ~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 459 (461)
++.+ ++.++.+|++++|++||..+.-+.+++++
T Consensus 422 ~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e 455 (476)
T 3lad_A 422 SAAELVQQGAIAMEFGTSAEDLGMMVFAHPALSE 455 (476)
T ss_dssp THHHHHHHHHHHHHHTCBHHHHHTSCCCSSCSHH
T ss_pred CHHHHHHHHHHHHHCCCcHHHHhcCccCCCChHH
Confidence 9888 68999999999999998887777776654
No 38
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=9.1e-46 Score=377.67 Aligned_cols=400 Identities=21% Similarity=0.276 Sum_probs=281.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCC----CCcccccccCCCC----CC-CCCCceeec-C
Q 012545 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYE----RPALSKAYLFPEG----TA-RLPGFHVCV-G 71 (461)
Q Consensus 2 m~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~----~~~~~~~~~~~~~----~~-~~~~~~~~~-~ 71 (461)
|++.+||+|||||+||+++|..|++.|++ |+|||+++..... .+..++.++.... .. .+..+.... .
T Consensus 2 M~~~~dVvIIGgG~aGl~aA~~l~~~G~~---V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~ 78 (478)
T 1v59_A 2 INKSHDVVIIGGGPAGYVAAIKAAQLGFN---TACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNG 78 (478)
T ss_dssp EEEEEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCe---EEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCC
Confidence 45579999999999999999999999986 9999996542210 0001111111000 00 000000000 0
Q ss_pred C---CC--------------CCCCHhHHHHcCcEEEcCCeEEEEeCCCCEEEcCCC--cE------EecCEEEEccCCCc
Q 012545 72 S---GG--------------ERLLPEWYKEKGIELILSTEIVRADIASKTLLSATG--LI------FKYQILVIATGSTV 126 (461)
Q Consensus 72 ~---~~--------------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~--~~------~~~d~liiAtG~~~ 126 (461)
. .. .....+++++.+++++.++.+. .+.....|.+.+| ++ +.||+||+|||++|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p 157 (478)
T 1v59_A 79 DIKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSF-EDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEV 157 (478)
T ss_dssp CEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEE-SSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEE
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-ccCCeEEEEecCCCcccccccceEEeCEEEECcCCCC
Confidence 0 00 0012345667899999986554 2222223455555 56 99999999999988
Q ss_pred cccccccccccCccccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHH
Q 012545 127 SITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELS 206 (461)
Q Consensus 127 ~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a 206 (461)
. .+||+. ..+ ..++ +..++..+. . .+++++|||+|++|+|+|
T Consensus 158 ~--~~~g~~-------------------------~~~---~~v~---~~~~~~~~~----~-~~~~vvViGgG~~g~e~A 199 (478)
T 1v59_A 158 T--PFPGIE-------------------------IDE---EKIV---SSTGALSLK----E-IPKRLTIIGGGIIGLEMG 199 (478)
T ss_dssp C--CCTTCC-------------------------CCS---SSEE---CHHHHTTCS----S-CCSEEEEECCSHHHHHHH
T ss_pred C--CCCCCC-------------------------CCC---ceEE---cHHHHHhhh----c-cCceEEEECCCHHHHHHH
Confidence 1 222211 111 1233 344443321 1 478999999999999999
Q ss_pred HHHHHCCCcEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeC-----CCcEEecCE
Q 012545 207 AALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK-----DGRTLEADI 281 (461)
Q Consensus 207 ~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~-----~G~~i~aD~ 281 (461)
..|++.|.+|+++++.+++++. +++++.+.+.+.+++.||+++++++|+++...+++....+++. +++++++|.
T Consensus 200 ~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~ 278 (478)
T 1v59_A 200 SVYSRLGSKVTVVEFQPQIGAS-MDGEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEV 278 (478)
T ss_dssp HHHHHTTCEEEEECSSSSSSSS-SCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESE
T ss_pred HHHHHcCCEEEEEEeCCccccc-cCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCE
Confidence 9999999999999999999985 8999999999999999999999999999986213333456665 456899999
Q ss_pred EEEccCCCCChh--hhh-ccccc-CCCcEEeCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHh
Q 012545 282 VVVGVGGRPLIS--LFK-GQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIM 357 (461)
Q Consensus 282 vi~a~G~~p~~~--~~~-~~~~~-~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~ 357 (461)
||+|+|++|+++ +++ .++.. ++|+|.||+++||+.|+|||+|||+..+ ..+..|..||+.||.||+
T Consensus 279 vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~ 348 (478)
T 1v59_A 279 LLVAVGRRPYIAGLGAEKIGLEVDKRGRLVIDDQFNSKFPHIKVVGDVTFGP----------MLAHKAEEEGIAAVEMLK 348 (478)
T ss_dssp EEECSCEEECCTTSCTTTTTCCBCTTSCBCCCTTSBCSSTTEEECGGGSSSC----------CCHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCcCCCCCCchhcCceeCCCCCEeECcCCccCCCCEEEeeccCCCc----------ccHHHHHHHHHHHHHHHc
Confidence 999999999997 443 45665 4788999999999999999999999865 457789999999999999
Q ss_pred cccCCCcccCCCCCCeEEEecCCcceEEccCCC------CcEEEecC-----Cccc---cCCCcEEEEEEe--CCEEEEE
Q 012545 358 ATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV------GDTVLFGD-----NDLA---SATHKFGTYWIK--DGKVVGV 421 (461)
Q Consensus 358 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~------~~~~~~~~-----~~~~---~~~~~~~~~~~~--~~~i~G~ 421 (461)
+.. ....|..+|+++++.+++.. +|.++ |..+.... .... ....+|.|+++. +|+|+|+
T Consensus 349 ~~~---~~~~~~~~p~~~~~~~~~a~--vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~ 423 (478)
T 1v59_A 349 TGH---GHVNYNNIPSVMYSHPEVAW--VGKTEEQLKEAGIDYKIGKFPFAANSRAKTNQDTEGFVKILIDSKTERILGA 423 (478)
T ss_dssp HSC---CCCCTTSCCEEECSSSEEEE--EECCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEE
T ss_pred CCC---CCCCCCCCCEEEEcCCcEEE--EECCHHHHHHcCCCEEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEE
Confidence 743 12567788988776665544 46553 32222211 1111 234678888774 8999999
Q ss_pred EEecCCHHH-HHHHHHHHHcCCCCCChhhhhccCCCccc
Q 012545 422 FLESGTPEE-NKAIAKVARVQPSVESLDVLKNEGLSFAS 459 (461)
Q Consensus 422 ~~~g~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 459 (461)
+++|+.+.+ ++.++.+|+++++++|+..+..+.+++.+
T Consensus 424 ~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~Pt~~e 462 (478)
T 1v59_A 424 HIIGPNAGEMIAEAGLALEYGASAEDVARVCHAHPTLSE 462 (478)
T ss_dssp EEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTCTTH
T ss_pred EEECCCHHHHHHHHHHHHHCCCCHHHHhhCCCCCCCHHH
Confidence 999998877 79999999999999998888777777654
No 39
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=1.8e-45 Score=373.99 Aligned_cols=396 Identities=22% Similarity=0.251 Sum_probs=279.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCC--C-CCcccccccCC----------CCCCCCC-Cceeec
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPY--E-RPALSKAYLFP----------EGTARLP-GFHVCV 70 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~--~-~~~~~~~~~~~----------~~~~~~~-~~~~~~ 70 (461)
.+||+|||||+||++||..|++.|++ |+|+|++..... . .+..++.++.. .....++ ......
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~---V~liE~~~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~ 79 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLS---TAIVEPKYWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDY 79 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCe---EEEEeCCCCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCH
Confidence 58999999999999999999999987 999999832100 0 00111111100 0000000 000000
Q ss_pred CC----------CCCCCCHhHHHHcCcEEEcCCeEEEEeCCCCEEEcCCC--cEEecCEEEEccCCCccccccccccccC
Q 012545 71 GS----------GGERLLPEWYKEKGIELILSTEIVRADIASKTLLSATG--LIFKYQILVIATGSTVSITSLTSIRSKH 138 (461)
Q Consensus 71 ~~----------~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~--~~~~~d~liiAtG~~~~~~~~~g~~~~~ 138 (461)
.. .......+++++.+++++.++.+. ++.....+.+.+| +++.||++|+|||++|..|++||
T Consensus 80 ~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~-id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~~~~~g----- 153 (464)
T 2a8x_A 80 GIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTF-ADANTLLVDLNDGGTESVTFDNAIIATGSSTRLVPGTS----- 153 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEE-SSSSEEEEEETTSCCEEEEEEEEEECCCEEECCCTTCC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-ecCCeEEEEeCCCceEEEEcCEEEECCCCCCCCCCCCC-----
Confidence 00 000012345667899999986543 4333234555666 67999999999999995444333
Q ss_pred ccccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEE
Q 012545 139 CLCCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSM 218 (461)
Q Consensus 139 ~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtl 218 (461)
.+.. ++ +..++..+. ..+++++|||+|++|+|+|..|++.|.+|++
T Consensus 154 -------------------------~~~~-~~---~~~~~~~~~-----~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtl 199 (464)
T 2a8x_A 154 -------------------------LSAN-VV---TYEEQILSR-----ELPKSIIIAGAGAIGMEFGYVLKNYGVDVTI 199 (464)
T ss_dssp -------------------------CBTT-EE---CHHHHHTCS-----SCCSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred -------------------------CCce-EE---ecHHHhhcc-----ccCCeEEEECCcHHHHHHHHHHHHcCCeEEE
Confidence 2221 33 334443321 1478999999999999999999999999999
Q ss_pred EccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeC-CC--cEEecCEEEEccCCCCChhh-
Q 012545 219 VYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK-DG--RTLEADIVVVGVGGRPLISL- 294 (461)
Q Consensus 219 i~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~-~G--~~i~aD~vi~a~G~~p~~~~- 294 (461)
+++.+++++. +++++.+.+.+.+++.||+++++++|++++.++++ ..+.+. +| +++++|.||+|+|++||+++
T Consensus 200 v~~~~~~l~~-~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l 276 (464)
T 2a8x_A 200 VEFLPRALPN-EDADVSKEIEKQFKKLGVTILTATKVESIADGGSQ--VTVTVTKDGVAQELKAEKVLQAIGFAPNVEGY 276 (464)
T ss_dssp ECSSSSSSTT-SCHHHHHHHHHHHHHHTCEEECSCEEEEEEECSSC--EEEEEESSSCEEEEEESEEEECSCEEECCSSS
T ss_pred EEcCCccccc-cCHHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCe--EEEEEEcCCceEEEEcCEEEECCCCCccCCCC
Confidence 9999999986 89999999999999999999999999999873333 345554 66 68999999999999999986
Q ss_pred -h-hccccc-CCCcEEeCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCcccCCCCC
Q 012545 295 -F-KGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYL 371 (461)
Q Consensus 295 -~-~~~~~~-~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~ 371 (461)
+ +.++.. ++|+|.||+++||+.|+|||+|||++.+ ..+..|..||+.||.||++... .+...|..+
T Consensus 277 ~~~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~-~~~~~~~~~ 345 (464)
T 2a8x_A 277 GLDKAGVALTDRKAIGVDDYMRTNVGHIYAIGDVNGLL----------QLAHVAEAQGVVAAETIAGAET-LTLGDHRML 345 (464)
T ss_dssp CHHHHTCCBCTTSSBCCCTTSBCSSTTEEECGGGGCSS----------CSHHHHHHHHHHHHHHHHTCCC-CCCCCGGGS
T ss_pred CchhcCCccCCCCCEeECcCCccCCCCEEEeECcCCCc----------cCHHHHHHHHHHHHHHhcCCCC-cccCCCCCC
Confidence 3 345665 4688999999999999999999999864 4577899999999999997321 111346677
Q ss_pred CeEEEecCCcceEEccCCC------CcEEEecC-----Cccc---cCCCcEEEEEE--eCCEEEEEEEecCCHHH-HHHH
Q 012545 372 PYFYSRAFDLSWQFYGDNV------GDTVLFGD-----NDLA---SATHKFGTYWI--KDGKVVGVFLESGTPEE-NKAI 434 (461)
Q Consensus 372 p~~~~~~~~~~~~~~g~~~------~~~~~~~~-----~~~~---~~~~~~~~~~~--~~~~i~G~~~~g~~~~~-~~~~ 434 (461)
|++.++.+ .+..+|.++ |..+.... .... ....+|.|+++ ++|+|+|++++|+.+.+ ++.+
T Consensus 346 p~~~~~~~--~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~ 423 (464)
T 2a8x_A 346 PRATFCQP--NVASFGLTEQQARNEGYDVVVAKFPFTANAKAHGVGDPSGFVKLVADAKHGELLGGHLVGHDVAELLPEL 423 (464)
T ss_dssp CEEECSSS--EEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTTEEEEEEEEETTGGGGHHHH
T ss_pred CEEEECCC--CeEEEcCCHHHHHhcCCCEEEEEEEcchhhhhhhcCCCcEEEEEEEECCCCEEEEEEEECcCHHHHHHHH
Confidence 87655444 445556553 22222211 1111 23567999888 48999999999999877 7999
Q ss_pred HHHHHcCCCCCChhhhhccCCCccc
Q 012545 435 AKVARVQPSVESLDVLKNEGLSFAS 459 (461)
Q Consensus 435 ~~~~~~~~~~~~~~~l~~~~~~~~~ 459 (461)
+.+|+++++++|+..+.-+.++|++
T Consensus 424 ~~ai~~~~~~~~l~~~~~~~Pt~~e 448 (464)
T 2a8x_A 424 TLAQRWDLTASELARNVHTHPTMSE 448 (464)
T ss_dssp HHHHHTTCBHHHHTTSCCCTTCTTH
T ss_pred HHHHHCCCCHHHHhhCccCCCChHH
Confidence 9999999999988877666666654
No 40
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=9.9e-46 Score=377.69 Aligned_cols=398 Identities=19% Similarity=0.198 Sum_probs=281.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCC-------CCCCc------ccccccCC-------------
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP-------YERPA------LSKAYLFP------------- 57 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~-------~~~~~------~~~~~~~~------------- 57 (461)
..|||+|||||+||++||..|++.|++ |+|||+.+..+ +...| .++.++..
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~---V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~ 84 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGAR---VACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAY 84 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCC---EEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCE---EEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhc
Confidence 468999999999999999999999987 99999532111 11111 11111000
Q ss_pred -CCCCCCCCceee--cC------CCCCCCCHhHHHHcCcEEEcCCeEEEEeCCCCEEEcCCCc-EEecCEEEEccCCCcc
Q 012545 58 -EGTARLPGFHVC--VG------SGGERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGL-IFKYQILVIATGSTVS 127 (461)
Q Consensus 58 -~~~~~~~~~~~~--~~------~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~-~~~~d~liiAtG~~~~ 127 (461)
......+.+.+. .. ..........++..+++++.+ .+..++.....+.+.+++ ++.||++|||||++|.
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~a~~~~~~~v~v~~~~g~~~~~~d~lviATGs~p~ 163 (483)
T 3dgh_A 85 GWNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYING-LGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRPR 163 (483)
T ss_dssp TBCCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEETTEEEEECTTCCEEEEEEEEEECCCEEEC
T ss_pred CcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEccCCEEEEEeCCCeEEEEcCEEEEeCCCCcC
Confidence 000000000000 00 000001113355679999987 556666555556666664 7999999999999998
Q ss_pred ccccccccccCccccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHH
Q 012545 128 ITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSA 207 (461)
Q Consensus 128 ~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~ 207 (461)
+|.+||+.+. .+ +.+++..+ ...+++++|||+|++|+|+|.
T Consensus 164 ~p~i~G~~~~-------------------------------~~---~~~~~~~~-----~~~~~~vvViGgG~~g~E~A~ 204 (483)
T 3dgh_A 164 YPDIPGAVEY-------------------------------GI---TSDDLFSL-----DREPGKTLVVGAGYIGLECAG 204 (483)
T ss_dssp CCSSTTHHHH-------------------------------CB---CHHHHTTC-----SSCCCEEEEECCSHHHHHHHH
T ss_pred CCCCCCcccc-------------------------------cC---cHHHHhhh-----hhcCCcEEEECCCHHHHHHHH
Confidence 7777775320 00 12222211 114789999999999999999
Q ss_pred HHHHCCCcEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCc-----EEecCEE
Q 012545 208 ALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGR-----TLEADIV 282 (461)
Q Consensus 208 ~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~-----~i~aD~v 282 (461)
.|++.|.+|+++++ +.+++. +++++.+.+.+.|++.||++++++++++++..+++.+ .+++.++. ++++|.|
T Consensus 205 ~l~~~g~~Vtlv~~-~~~l~~-~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~~~~D~v 281 (483)
T 3dgh_A 205 FLKGLGYEPTVMVR-SIVLRG-FDQQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKL-LVKYKNVETGEESEDVYDTV 281 (483)
T ss_dssp HHHHTTCEEEEEES-SCSSTT-SCHHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCE-EEEEEETTTCCEEEEEESEE
T ss_pred HHHHcCCEEEEEeC-CCCCcc-cCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcE-EEEEecCCCCceeEEEcCEE
Confidence 99999999999998 456665 7999999999999999999999999999987444443 56666553 7999999
Q ss_pred EEccCCCCChhhh---hcccccCCCcEEeCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcc
Q 012545 283 VVGVGGRPLISLF---KGQVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMAT 359 (461)
Q Consensus 283 i~a~G~~p~~~~~---~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 359 (461)
++|+|++|+++++ ..++..++|+|.||+++||+.|+|||+|||+.... ..+..|..||+.||.||++.
T Consensus 282 i~a~G~~p~~~~l~l~~~gl~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~---------~~~~~A~~~g~~aa~~i~g~ 352 (483)
T 3dgh_A 282 LWAIGRKGLVDDLNLPNAGVTVQKDKIPVDSQEATNVANIYAVGDIIYGKP---------ELTPVAVLAGRLLARRLYGG 352 (483)
T ss_dssp EECSCEEECCGGGTGGGTTCCCBTTBBCCCTTCBCSSTTEEECSTTBTTSC---------CCHHHHHHHHHHHHHHHHSC
T ss_pred EECcccccCcCcCCchhcCccccCCEEEECcCCccCCCCEEEEEcccCCCC---------ccHHHHHHHHHHHHHHHcCC
Confidence 9999999999876 33566655999999999999999999999984321 46788999999999999976
Q ss_pred cCCCcccCCCCCCeEEEecCCcceEEccCCC-------C-c--EEEecCCccc-------cCCCcEEEEEE--e-CCEEE
Q 012545 360 EGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV-------G-D--TVLFGDNDLA-------SATHKFGTYWI--K-DGKVV 419 (461)
Q Consensus 360 ~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~-------~-~--~~~~~~~~~~-------~~~~~~~~~~~--~-~~~i~ 419 (461)
.. ....|..+|+.+++.++++.+ |.++ + . .+......+. ..+.+|.|+++ + +|+||
T Consensus 353 ~~--~~~~~~~~p~~~~~~p~~a~v--Glte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~~~~~~~il 428 (483)
T 3dgh_A 353 ST--QRMDYKDVATTVFTPLEYACV--GLSEEDAVKQFGADEIEVFHGYYKPTEFFIPQKSVRYCYLKAVAERHGDQRVY 428 (483)
T ss_dssp CC--CCCCCTTCCEEECSSSEEEEE--ECCHHHHHHHHCGGGEEEEEEECCCGGGTTTTCCCTTCEEEEEEESSTTCBEE
T ss_pred CC--CcCCCCCCCEEEECCCccEEE--eCCHHHHHhhCCCCCEEEEEEeecchhhhhhccCCCcEEEEEEEecCCCCEEE
Confidence 42 235678889888776665554 5543 1 1 1211111110 13567999887 3 69999
Q ss_pred EEEEecCCHHH-HHHHHHHHHcCCCCCChhhhhccCCCcccC
Q 012545 420 GVFLESGTPEE-NKAIAKVARVQPSVESLDVLKNEGLSFASK 460 (461)
Q Consensus 420 G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 460 (461)
|+|++|+++.+ ++.++.+|++++|++||..+.-+.+++++.
T Consensus 429 G~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~ 470 (483)
T 3dgh_A 429 GLHYIGPVAGEVIQGFAAALKSGLTINTLINTVGIHPTTAEE 470 (483)
T ss_dssp EEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGG
T ss_pred EEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHH
Confidence 99999999888 689999999999999988877777777654
No 41
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=6.6e-45 Score=372.73 Aligned_cols=402 Identities=20% Similarity=0.242 Sum_probs=274.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCC--CCCCcc-cccccCCC---------CCCCC---CCceee
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP--YERPAL-SKAYLFPE---------GTARL---PGFHVC 69 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~--~~~~~~-~~~~~~~~---------~~~~~---~~~~~~ 69 (461)
.+||+|||||+||++||..|++.|++ |+|||+++... ..+.|. ++.++... ....+ +.+.+.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~---V~liE~~~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 78 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAK---VALVEKSRLGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLP 78 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSTTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCc---EEEEeCCCcCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccCHH
Confidence 48999999999999999999999887 99999985311 011111 11111000 00000 000000
Q ss_pred --cC------CCCCCCCHhHHHHcCcEEEcCCeEEEEeCCCCEEEcCC-------------CcEEecCEEEEccCCCccc
Q 012545 70 --VG------SGGERLLPEWYKEKGIELILSTEIVRADIASKTLLSAT-------------GLIFKYQILVIATGSTVSI 128 (461)
Q Consensus 70 --~~------~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~-------------~~~~~~d~liiAtG~~~~~ 128 (461)
.. .........++++.+++++.++ +..++ .+.+.+.+ ++++.||+||+|||++|.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~id--~~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~~ 155 (500)
T 1onf_A 79 LLVERRDKYIQRLNNIYRQNLSKDKVDLYEGT-ASFLS--ENRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVF 155 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-CCCC----------------------------CBSSEEECCCCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEee--CCEEEEEeccccccccccCCCceEEEeCEEEECCCCCCCC
Confidence 00 0000012234567899999884 33333 34555533 5679999999999999976
Q ss_pred cccccccccCccccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHH
Q 012545 129 TSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAA 208 (461)
Q Consensus 129 ~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~ 208 (461)
|++||++ .+++ .+++..+ . .+++++|||+|++|+|+|..
T Consensus 156 p~i~G~~--------------------------------~~~~---~~~~~~~----~--~~~~vvViGgG~ig~E~A~~ 194 (500)
T 1onf_A 156 PPVKGIE--------------------------------NTIS---SDEFFNI----K--ESKKIGIVGSGYIAVELINV 194 (500)
T ss_dssp CSCTTGG--------------------------------GCEE---HHHHTTC----C--CCSEEEEECCSHHHHHHHHH
T ss_pred CCCCCCC--------------------------------cccC---HHHHhcc----C--CCCeEEEECChHHHHHHHHH
Confidence 6655531 1222 2222211 1 27899999999999999999
Q ss_pred HHHCCCcEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcE-EecCEEEEccC
Q 012545 209 LKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRT-LEADIVVVGVG 287 (461)
Q Consensus 209 l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~-i~aD~vi~a~G 287 (461)
|++.|.+|+++++.+++++. +++++.+.+.+.|++.||+++++++|++++.++++. ..+++++|++ +++|.||+|+|
T Consensus 195 l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~~~~~D~vi~a~G 272 (500)
T 1onf_A 195 IKRLGIDSYIFARGNRILRK-FDESVINVLENDMKKNNINIVTFADVVEIKKVSDKN-LSIHLSDGRIYEHFDHVIYCVG 272 (500)
T ss_dssp HHTTTCEEEEECSSSSSCTT-SCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTC-EEEEETTSCEEEEESEEEECCC
T ss_pred HHHcCCeEEEEecCCccCcc-cchhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCce-EEEEECCCcEEEECCEEEECCC
Confidence 99999999999999999986 899999999999999999999999999998743343 4688889988 99999999999
Q ss_pred CCCChh-h-h-hcccccCCCcEEeCCCCCCCCCCEEEeCcccccCccc-----------------------cC-cceeec
Q 012545 288 GRPLIS-L-F-KGQVAENKGGIETDDFFKTSADDVYAVGDVATFPMKL-----------------------YR-EMRRVE 340 (461)
Q Consensus 288 ~~p~~~-~-~-~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~-----------------------~~-~~~~~~ 340 (461)
++|+++ + + ..++..++|+|.||+++||+.|+|||+|||+..+... .+ ....++
T Consensus 273 ~~p~~~~l~~~~~g~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (500)
T 1onf_A 273 RSPDTENLKLEKLNVETNNNYIVVDENQRTSVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQ 352 (500)
T ss_dssp BCCTTTTSSCTTTTCCBSSSCEEECTTCBCSSSSEEECSTTEEEC------------------------------CBCCC
T ss_pred CCcCCCCCCchhcCccccCCEEEECCCcccCCCCEEEEeccccccccccccccccccccccccccccccccccccCCccc
Confidence 999996 3 3 3445557788999999999999999999999432100 00 002346
Q ss_pred cHHHHHHHHHHHHHHHhcccCCCcccCCCCCCeEEEecCCcceEEccCCC-------C-cEEE-----ecCCcc------
Q 012545 341 HVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV-------G-DTVL-----FGDNDL------ 401 (461)
Q Consensus 341 ~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~-------~-~~~~-----~~~~~~------ 401 (461)
++..|..||++||.||++... ....|..+|+..++.+++..+ |.++ | ..+. +.....
T Consensus 353 ~~~~A~~~g~~aa~~i~g~~~--~~~~~~~~p~~~~~~~~~a~v--Gl~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~ 428 (500)
T 1onf_A 353 LTPVAINAGRLLADRLFLKKT--RKTNYKLIPTVIFSHPPIGTI--GLSEEAAIQIYGKENVKIYESKFTNLFFSVYDIE 428 (500)
T ss_dssp CHHHHHHHHHHHHHHHHSCTT--CCCCCSSCCEEECCSSCEEEE--ECCHHHHHHHTCGGGEEEEEEEECCGGGTTSCSC
T ss_pred chhHHHHHHHHHHHHHhCCCC--ccCCCCCCCeEEEcCcceEEE--eCCHHHHHhcCCCccEEEEEEECchhhhhhcccc
Confidence 889999999999999997431 235677788876655555444 5542 2 1121 111111
Q ss_pred -ccCCCcEEEEEE--eCCEEEEEEEecCCHHH-HHHHHHHHHcCCCCCChhhhhccCCCccc
Q 012545 402 -ASATHKFGTYWI--KDGKVVGVFLESGTPEE-NKAIAKVARVQPSVESLDVLKNEGLSFAS 459 (461)
Q Consensus 402 -~~~~~~~~~~~~--~~~~i~G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 459 (461)
.....+|.|+++ ++|+|||+|++|+.+.+ ++.++.+|+.+++++||..+.-+.+++++
T Consensus 429 ~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e 490 (500)
T 1onf_A 429 PELKEKTYLKLVCVGKDELIKGLHIIGLNADEIVQGFAVALKMNATKKDFDETIPIHPTAAE 490 (500)
T ss_dssp GGGSCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTCSTT
T ss_pred ccCCCceEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhccccCCCCHHH
Confidence 123567888888 57999999999998888 68999999999999998888777777665
No 42
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3e-45 Score=373.11 Aligned_cols=397 Identities=23% Similarity=0.279 Sum_probs=281.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCC----CCcccccccCCCC----------CCCCC--Cc
Q 012545 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYE----RPALSKAYLFPEG----------TARLP--GF 66 (461)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~----~~~~~~~~~~~~~----------~~~~~--~~ 66 (461)
+.++||+|||||+||++||..|++.|++ |+|||+++..... .+..++.++.... ...++ ..
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~---V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~ 80 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFK---TTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNV 80 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCC---EEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCE
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCe---EEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 3468999999999999999999999987 9999998643211 0011111110000 00000 00
Q ss_pred eeecCC----------CCCCCCHhHHHHcCcEEEcCCeEEEEeCCCCEEEcCCC--cEEecCEEEEccCCCccccccccc
Q 012545 67 HVCVGS----------GGERLLPEWYKEKGIELILSTEIVRADIASKTLLSATG--LIFKYQILVIATGSTVSITSLTSI 134 (461)
Q Consensus 67 ~~~~~~----------~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~--~~~~~d~liiAtG~~~~~~~~~g~ 134 (461)
...... ........++++.+++++.++.+. ++.....+.+.+| +++.||++|+|||++|.+|++||+
T Consensus 81 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~p~~~g~ 159 (470)
T 1dxl_A 81 EIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF-VSPSEISVDTIEGENTVVKGKHIIIATGSDVKSLPGVTI 159 (470)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE-EETTEEEECCSSSCCEEEECSEEEECCCEEECCBTTBCC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-ecCCEEEEEeCCCceEEEEcCEEEECCCCCCCCCCCCCC
Confidence 000000 000012345566799999986554 6654344555566 679999999999999965544442
Q ss_pred cccCccccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCC
Q 012545 135 RSKHCLCCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNI 214 (461)
Q Consensus 135 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~ 214 (461)
+..++++ ..++..+ . ..+++++|||+|++|+|+|..|.+.|.
T Consensus 160 ------------------------------~~~~v~~---~~~~~~~----~-~~~~~vvViGgG~~g~e~A~~l~~~g~ 201 (470)
T 1dxl_A 160 ------------------------------DEKKIVS---STGALAL----S-EIPKKLVVIGAGYIGLEMGSVWGRIGS 201 (470)
T ss_dssp ------------------------------CSSSEEC---HHHHTTC----S-SCCSEEEESCCSHHHHHHHHHHHHHTC
T ss_pred ------------------------------CcccEEe---HHHhhhh----h-hcCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 2233443 3333222 1 147899999999999999999999999
Q ss_pred cEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeC---CC--cEEecCEEEEccCCC
Q 012545 215 DVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK---DG--RTLEADIVVVGVGGR 289 (461)
Q Consensus 215 ~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~---~G--~~i~aD~vi~a~G~~ 289 (461)
+|+++++.+++++. +++++.+.+.+.+++.||+++++++|++++.++++ ..+.+. +| +++++|.||+|+|++
T Consensus 202 ~Vtli~~~~~~l~~-~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 278 (470)
T 1dxl_A 202 EVTVVEFASEIVPT-MDAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDG--VKLTVEPSAGGEQTIIEADVVLVSAGRT 278 (470)
T ss_dssp EEEEECSSSSSSTT-SCHHHHHHHHHHHHHSSCCEECSEEEEEEECSSSS--EEEEEEESSSCCCEEEEESEEECCCCEE
T ss_pred cEEEEEcCCccccc-ccHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCe--EEEEEEecCCCcceEEECCEEEECCCCC
Confidence 99999999999986 89999999999999999999999999999863333 345553 44 689999999999999
Q ss_pred CChhh--hh-ccccc-CCCcEEeCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCcc
Q 012545 290 PLISL--FK-GQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTV 365 (461)
Q Consensus 290 p~~~~--~~-~~~~~-~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~ 365 (461)
||+++ ++ .++.. ++|+|.||+++||+.|+|||+|||+..+ ..+..|..||+.||.||++.. ..
T Consensus 279 p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~---~~ 345 (470)
T 1dxl_A 279 PFTSGLNLDKIGVETDKLGRILVNERFSTNVSGVYAIGDVIPGP----------MLAHKAEEDGVACVEYLAGKV---GH 345 (470)
T ss_dssp ECCTTSCCTTTTCCBCSSSCBCCCTTCBCSSTTEEECSTTSSSC----------CCHHHHHHHHHHHHHHHTTSC---CC
T ss_pred cCCCCCCchhcCCccCCCCCEeECcCCccCCCCEEEEeccCCCC----------ccHHHHHHHHHHHHHHHcCCC---cC
Confidence 99987 33 35665 4688999999999999999999999864 457789999999999999743 12
Q ss_pred cCCCCCCeEEEecCCcceEEccCCC------CcEEEecCC-----ccc---cCCCcEEEEEEe--CCEEEEEEEecCCHH
Q 012545 366 TGYDYLPYFYSRAFDLSWQFYGDNV------GDTVLFGDN-----DLA---SATHKFGTYWIK--DGKVVGVFLESGTPE 429 (461)
Q Consensus 366 ~~~~~~p~~~~~~~~~~~~~~g~~~------~~~~~~~~~-----~~~---~~~~~~~~~~~~--~~~i~G~~~~g~~~~ 429 (461)
..|..+|++..+. ..+..+|.++ |..+..... ... ....+|.|++++ +|+|+|++++|+.+.
T Consensus 346 ~~~~~~p~~~~~~--~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~ 423 (470)
T 1dxl_A 346 VDYDKVPGVVYTN--PEVASVGKTEEQVKETGVEYRVGKFPFMANSRAKAIDNAEGLVKIIAEKETDKILGVHIMAPNAG 423 (470)
T ss_dssp CCTTSCCEEECSS--SEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHHSCCCCEEEEEEETTTCBEEEEEEEETTHH
T ss_pred CCCCCCCEEEECC--CceEEEcCCHHHHHhcCCcEEEEEEecccchHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHH
Confidence 4566678765444 4455556553 322222111 111 235679998884 899999999999987
Q ss_pred H-HHHHHHHHHcCCCCCChhhhhccCCCccc
Q 012545 430 E-NKAIAKVARVQPSVESLDVLKNEGLSFAS 459 (461)
Q Consensus 430 ~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 459 (461)
+ ++.++.+|+++++++|+..+.-+.++|.+
T Consensus 424 ~~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e 454 (470)
T 1dxl_A 424 ELIHEAAIALQYDASSEDIARVCHAHPTMSE 454 (470)
T ss_dssp HHHHHHHHHHHTTCBHHHHHTSCCCSSCTTH
T ss_pred HHHHHHHHHHHCCCCHHHHhhcccCCCChHH
Confidence 7 69999999999999998877777766654
No 43
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=9.8e-45 Score=368.22 Aligned_cols=391 Identities=22% Similarity=0.288 Sum_probs=279.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCC--CCCCc-ccccccCCCCC----CCCCCceee--cCCCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP--YERPA-LSKAYLFPEGT----ARLPGFHVC--VGSGGE 75 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~--~~~~~-~~~~~~~~~~~----~~~~~~~~~--~~~~~~ 75 (461)
.+||+|||||+||++||..|++.|++ |+|||+++... ....+ .++.++..... .....+... ...+..
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~---V~lie~~~~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 82 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLK---VLAVEAGEVGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLK 82 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCTTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCe---EEEEeCCCCCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHH
Confidence 58999999999999999999999886 99999986211 00111 11211110000 000000000 000000
Q ss_pred --------------CCCHhHHHHcCcEEEcCCeEEEEeCCCCEEEcCCCcEEecCEEEEccCCCccccccccccccCccc
Q 012545 76 --------------RLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVSITSLTSIRSKHCLC 141 (461)
Q Consensus 76 --------------~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~ 141 (461)
.....++++.+++++.++.+ .++ .+++.+. ++++.||+||+|||++|.+|
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~~~--~~~v~v~-g~~~~~d~lViATGs~p~~p------------ 146 (464)
T 2eq6_A 83 KLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFAR-LVG--PKEVEVG-GERYGAKSLILATGSEPLEL------------ 146 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEE-EEE--TTEEEET-TEEEEEEEEEECCCEEECCB------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEE-Ecc--CCEEEEc-cEEEEeCEEEEcCCCCCCCC------------
Confidence 00234566789999998544 354 4677776 67899999999999999432
Q ss_pred cccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcc
Q 012545 142 CFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYP 221 (461)
Q Consensus 142 ~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~ 221 (461)
| ++++. ..++ +..++..+ ....+++++|||+|++|+|+|..|++.|.+|+++++
T Consensus 147 ---------------~--gi~~~--~~v~---~~~~~~~l----~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 200 (464)
T 2eq6_A 147 ---------------K--GFPFG--EDVW---DSTRALKV----EEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEY 200 (464)
T ss_dssp ---------------T--TBCCS--SSEE---CHHHHTCG----GGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred ---------------C--CCCCC--CcEE---cHHHHHhh----hhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEc
Confidence 2 13331 2344 34444332 221478999999999999999999999999999999
Q ss_pred CCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeC-C--Cc--EEecCEEEEccCCCCChhhh-
Q 012545 222 EPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK-D--GR--TLEADIVVVGVGGRPLISLF- 295 (461)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~-~--G~--~i~aD~vi~a~G~~p~~~~~- 295 (461)
.+++++. +++++.+.+.+.+++.||+++++++|++++.++ +. ..+++. + |+ ++++|.||+|+|++|+++++
T Consensus 201 ~~~~l~~-~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~-~~-~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~ 277 (464)
T 2eq6_A 201 MPEILPQ-GDPETAALLRRALEKEGIRVRTKTKAVGYEKKK-DG-LHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLG 277 (464)
T ss_dssp SSSSSTT-SCHHHHHHHHHHHHHTTCEEECSEEEEEEEEET-TE-EEEEEEETTCCSCEEEEESEEEECSCEEESCTTSS
T ss_pred CCccccc-cCHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeC-CE-EEEEEeecCCCceeEEEcCEEEECCCcccCCCCCC
Confidence 9999886 799999999999999999999999999998732 22 456665 6 76 89999999999999999853
Q ss_pred --hccccc-CCCcEEeCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCcccCCCCCC
Q 012545 296 --KGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLP 372 (461)
Q Consensus 296 --~~~~~~-~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p 372 (461)
..++.. ++|+|.||+++||+.|+|||+|||++.+ ..+..|..||+.||.||++.. ....|. +|
T Consensus 278 l~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~----------~l~~~A~~~g~~aa~~i~g~~---~~~~~~-~p 343 (464)
T 2eq6_A 278 LEKAGVKVDERGFIRVNARMETSVPGVYAIGDAARPP----------LLAHKAMREGLIAAENAAGKD---SAFDYQ-VP 343 (464)
T ss_dssp HHHHTCCBCTTSCBCCCTTCBCSSTTEEECGGGTCSS----------CCHHHHHHHHHHHHHHHTTCC---CCCCCC-CC
T ss_pred hhhcCceecCCCCEEECCCcccCCCCEEEEeccCCCc----------ccHHHHHHHHHHHHHHhcCCC---cccCCC-CC
Confidence 345665 5788999999999999999999999864 457789999999999999743 124566 78
Q ss_pred eEEEecCCcceEEccCCC------CcEEEecC-----Cccc---cCCCcEEEEEEe--CCEEEEEEEecCCHHH-HHHHH
Q 012545 373 YFYSRAFDLSWQFYGDNV------GDTVLFGD-----NDLA---SATHKFGTYWIK--DGKVVGVFLESGTPEE-NKAIA 435 (461)
Q Consensus 373 ~~~~~~~~~~~~~~g~~~------~~~~~~~~-----~~~~---~~~~~~~~~~~~--~~~i~G~~~~g~~~~~-~~~~~ 435 (461)
++..+.+ .+..+|.++ |..+.... ...+ ....+|.|++++ +|+|+|++++|+.+.+ ++.++
T Consensus 344 ~~~~~~~--~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~ 421 (464)
T 2eq6_A 344 SVVYTSP--EWAGVGLTEEEAKRAGYKVKVGKFPLAASGRALTLGGAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAA 421 (464)
T ss_dssp EEECSSS--EEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTSCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHH
T ss_pred eEEECCC--CEEEEeCCHHHHHhcCCCEEEEEEEcCcchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHH
Confidence 7654444 445556554 22222211 1111 235678998884 7999999999999887 69999
Q ss_pred HHHHcCCCCCChhhhhccCCCccc
Q 012545 436 KVARVQPSVESLDVLKNEGLSFAS 459 (461)
Q Consensus 436 ~~~~~~~~~~~~~~l~~~~~~~~~ 459 (461)
.+|+.+++++|+..+.-+.+++.+
T Consensus 422 ~ai~~~~~~~~l~~~~~~~Pt~~e 445 (464)
T 2eq6_A 422 LALEMGATLTDLALTVHPHPTLSE 445 (464)
T ss_dssp HHHHTTCBHHHHHHSCCCSSCTTH
T ss_pred HHHHCCCCHHHHhcCcCCCCChHH
Confidence 999999999998877777766654
No 44
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1e-44 Score=367.49 Aligned_cols=394 Identities=20% Similarity=0.263 Sum_probs=279.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCC---CCCCcccccccCCC----CCCCCCCceeecCCC----
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP---YERPALSKAYLFPE----GTARLPGFHVCVGSG---- 73 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~---- 73 (461)
++||+|||||+||++||..|++.|++ |+|||++.... +..+..++.++... .......+.......
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~---V~lie~~~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 79 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQK---VTIVEKGNLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDF 79 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCe---EEEEECCCCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCH
Confidence 58999999999999999999999987 99999983210 00011111111000 000000000000000
Q ss_pred -------------CCCCCHhHHHHcCcEEEcCCeEEEEeCCCCEEEcCCC-cEEecCEEEEccCCCccccccccccccCc
Q 012545 74 -------------GERLLPEWYKEKGIELILSTEIVRADIASKTLLSATG-LIFKYQILVIATGSTVSITSLTSIRSKHC 139 (461)
Q Consensus 74 -------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~-~~~~~d~liiAtG~~~~~~~~~g~~~~~~ 139 (461)
......+++++.+++++.++.+ .++.....+.+.++ +++.||++|+|||++|..|++||
T Consensus 80 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~id~~~v~V~~~~G~~~i~~d~lViATGs~p~~~~~~g------ 152 (455)
T 1ebd_A 80 AKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAY-FVDANTVRVVNGDSAQTYTFKNAIIATGSRPIELPNFK------ 152 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEE-EEETTEEEEEETTEEEEEECSEEEECCCEEECCBTTBC------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-EccCCeEEEEeCCCcEEEEeCEEEEecCCCCCCCCCCC------
Confidence 0001234556789999998544 46654445666666 67999999999999995544333
Q ss_pred cccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEE
Q 012545 140 LCCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMV 219 (461)
Q Consensus 140 ~~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli 219 (461)
.+. .++ +..++..+ . ..+++++|||+|++|+|+|..|++.|.+|+++
T Consensus 153 ------------------------~~~-~v~---~~~~~~~~----~-~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv 199 (455)
T 1ebd_A 153 ------------------------FSN-RIL---DSTGALNL----G-EVPKSLVVIGGGYIGIELGTAYANFGTKVTIL 199 (455)
T ss_dssp ------------------------CCS-SEE---CHHHHHTC----S-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred ------------------------ccc-eEe---cHHHHhcc----c-cCCCeEEEECCCHHHHHHHHHHHHcCCcEEEE
Confidence 221 133 33443332 1 14789999999999999999999999999999
Q ss_pred ccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeC---CCcEEecCEEEEccCCCCChhh--
Q 012545 220 YPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK---DGRTLEADIVVVGVGGRPLISL-- 294 (461)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~---~G~~i~aD~vi~a~G~~p~~~~-- 294 (461)
++.+++++. +++++.+.+.+.+++.||+++++++|++++.++++ ..+++. +++++++|.||+|+|++|++++
T Consensus 200 ~~~~~~l~~-~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~ 276 (455)
T 1ebd_A 200 EGAGEILSG-FEKQMAAIIKKRLKKKGVEVVTNALAKGAEEREDG--VTVTYEANGETKTIDADYVLVTVGRRPNTDELG 276 (455)
T ss_dssp ESSSSSSTT-SCHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTE--EEEEEEETTEEEEEEESEEEECSCEEESCSSSS
T ss_pred EcCCccccc-cCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCe--EEEEEEeCCceeEEEcCEEEECcCCCcccCcCC
Confidence 999999886 79999999999999999999999999999863322 345543 4568999999999999999986
Q ss_pred hh-ccccc-CCCcEEeCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCcccCCCCCC
Q 012545 295 FK-GQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLP 372 (461)
Q Consensus 295 ~~-~~~~~-~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p 372 (461)
++ .++.. ++|+|.||+++||+.|+|||+|||+..+ ..+..|..||+.||.||.+.. ....|..+|
T Consensus 277 ~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~---~~~~~~~~p 343 (455)
T 1ebd_A 277 LEQIGIKMTNRGLIEVDQQCRTSVPNIFAIGDIVPGP----------ALAHKASYEGKVAAEAIAGHP---SAVDYVAIP 343 (455)
T ss_dssp TTTTTCCBCTTSCBCCCTTCBCSSTTEEECGGGSSSC----------CCHHHHHHHHHHHHHHHTSCC---CCCCCSCCC
T ss_pred hhhcCCccCCCCCEeeCCCcccCCCCEEEEeccCCCc----------ccHHHHHHHHHHHHHHHcCCC---ccCCCCCCC
Confidence 33 34655 4688999999999999999999999864 457789999999999999743 124566778
Q ss_pred eEEEecCCcceEEccCCC------CcEEEecCC-----ccc---cCCCcEEEEEEe--CCEEEEEEEecCCHHH-HHHHH
Q 012545 373 YFYSRAFDLSWQFYGDNV------GDTVLFGDN-----DLA---SATHKFGTYWIK--DGKVVGVFLESGTPEE-NKAIA 435 (461)
Q Consensus 373 ~~~~~~~~~~~~~~g~~~------~~~~~~~~~-----~~~---~~~~~~~~~~~~--~~~i~G~~~~g~~~~~-~~~~~ 435 (461)
++....++ +..+|.++ |..+..... ... ....+|.|++++ +|+|+|++++|+.+.+ ++.++
T Consensus 344 ~~~~~~~~--~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~ 421 (455)
T 1ebd_A 344 AVVFSDPE--CASVGYFEQQAKDEGIDVIAAKFPFAANGRALALNDTDGFLKLVVRKEDGVIIGAQIIGPNASDMIAELG 421 (455)
T ss_dssp EEECSSSC--EEEEECCHHHHHTTTCCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTTEEEEEEEESTTHHHHHHHHH
T ss_pred EEEECCCc--eEEEeCCHHHHHhcCCCEEEEEEEcCcchHHhhcCCCcEEEEEEEECCCCEEEEEEEeCCCHHHHHHHHH
Confidence 76554444 44556543 322222111 111 235679998884 8999999999999877 69999
Q ss_pred HHHHcCCCCCChhhhhccCCCccc
Q 012545 436 KVARVQPSVESLDVLKNEGLSFAS 459 (461)
Q Consensus 436 ~~~~~~~~~~~~~~l~~~~~~~~~ 459 (461)
.+|+++++++|+..+.-+.+++.+
T Consensus 422 ~ai~~~~~~~~l~~~~~~~Pt~~e 445 (455)
T 1ebd_A 422 LAIEAGMTAEDIALTIHAHPTLGE 445 (455)
T ss_dssp HHHHHTCBHHHHHHSCCCTTSSTH
T ss_pred HHHHCCCCHHHHhhcccCCCCHHH
Confidence 999999999998887777777654
No 45
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=4.8e-45 Score=375.06 Aligned_cols=399 Identities=18% Similarity=0.158 Sum_probs=279.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCC------CCc------ccccccCCCCC----CCCCCce
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYE------RPA------LSKAYLFPEGT----ARLPGFH 67 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~------~~~------~~~~~~~~~~~----~~~~~~~ 67 (461)
..+||+|||||+||++||..|++.|++ |+|||+++..++. ..| .++.++..... .....+.
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~---V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g 107 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKK---VMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYG 107 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCC---EEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCe---EEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcC
Confidence 468999999999999999999999987 9999996422111 001 11111100000 0000000
Q ss_pred eecCCC------------------CCCCCHhHHHHcCcEEEcCCeEEEEeCCCCEEEcCCCc--EEecCEEEEccCCCcc
Q 012545 68 VCVGSG------------------GERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGL--IFKYQILVIATGSTVS 127 (461)
Q Consensus 68 ~~~~~~------------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~--~~~~d~liiAtG~~~~ 127 (461)
...... ........++..+++++.+ .+..++.....+...+|+ ++.||+||||||++|.
T Consensus 108 ~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g-~a~~~d~~~v~v~~~~g~~~~i~~d~lViATGs~p~ 186 (519)
T 3qfa_A 108 WKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENA-YGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPR 186 (519)
T ss_dssp BCCCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEETTEEEEECTTCCCCEEEEEEEEECCCEEEC
T ss_pred cccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEeeCCEEEEEcCCCCEEEEECCEEEEECCCCcC
Confidence 000000 0001122455679999987 677777665566666664 7999999999999998
Q ss_pred ccccccccccCccccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHH
Q 012545 128 ITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSA 207 (461)
Q Consensus 128 ~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~ 207 (461)
+|.+||..++ + .+.+++..+ ...+++++|||+|++|+|+|.
T Consensus 187 ~p~i~G~~~~-------------------------------~---~t~~~~~~l-----~~~~~~vvVIGgG~ig~E~A~ 227 (519)
T 3qfa_A 187 YLGIPGDKEY-------------------------------C---ISSDDLFSL-----PYCPGKTLVVGASYVALECAG 227 (519)
T ss_dssp CCCCTTHHHH-------------------------------C---BCHHHHTTC-----SSCCCSEEEECCSHHHHHHHH
T ss_pred CCCCCCccCc-------------------------------e---EcHHHHhhh-----hhcCCeEEEECCcHHHHHHHH
Confidence 7777775320 0 112222211 114678999999999999999
Q ss_pred HHHHCCCcEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCC---CC-EEEEEeCCCc---EEecC
Q 012545 208 ALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNAD---GE-VKEVKLKDGR---TLEAD 280 (461)
Q Consensus 208 ~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~---g~-~~~v~~~~G~---~i~aD 280 (461)
.|++.|.+|+++++. .+++. +++++.+.+.+.|++.||+++++++++++...++ +. ...+...+|. ++++|
T Consensus 228 ~l~~~G~~Vtlv~~~-~~l~~-~d~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D 305 (519)
T 3qfa_A 228 FLAGIGLDVTVMVRS-ILLRG-FDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYN 305 (519)
T ss_dssp HHHHTTCCEEEEESS-CSSTT-SCHHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEES
T ss_pred HHHHcCCeEEEEecc-ccccc-CCHHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECC
Confidence 999999999999984 66765 7999999999999999999999988888865322 22 2233445652 57899
Q ss_pred EEEEccCCCCChhhh---hccccc--CCCcEEeCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHH
Q 012545 281 IVVVGVGGRPLISLF---KGQVAE--NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKT 355 (461)
Q Consensus 281 ~vi~a~G~~p~~~~~---~~~~~~--~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~ 355 (461)
.|++|+|++|+++++ ..++.. .+|+|.||+++||+.|+|||+|||+.... ..+..|..||++||.|
T Consensus 306 ~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~I~Vd~~~~Ts~~~IyA~GD~~~g~~---------~~~~~A~~~g~~aa~~ 376 (519)
T 3qfa_A 306 TVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKV---------ELTPVAIQAGRLLAQR 376 (519)
T ss_dssp EEEECSCEEESCSSSCSTTTTCCCCTTTCCBCCCTTSBCSSTTEEECGGGBSSSC---------CCHHHHHHHHHHHHHH
T ss_pred EEEEecCCcccCCCCChhhcCcEEcCCCCeEeeCCCCccCCCCEEEEEeccCCCC---------ccHHHHHHHHHHHHHH
Confidence 999999999999853 345665 36899999999999999999999994321 5678899999999999
Q ss_pred HhcccCCCcccCCCCCCeEEEecCCcceEEccCCCC--------cEEEe--cCCcc-------ccCCCcEEEEEEe---C
Q 012545 356 IMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVG--------DTVLF--GDNDL-------ASATHKFGTYWIK---D 415 (461)
Q Consensus 356 i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~--------~~~~~--~~~~~-------~~~~~~~~~~~~~---~ 415 (461)
|++... ....|..+|+..++.++++.+ |.++. ..+.. ....+ ...+.+|+|++++ +
T Consensus 377 i~g~~~--~~~~~~~~p~~~~~~p~~a~v--Glte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~ 452 (519)
T 3qfa_A 377 LYAGST--VKCDYENVPTTVFTPLEYGAC--GLSEEKAVEKFGEENIEVYHSYFWPLEWTIPSRDNNKCYAKIICNTKDN 452 (519)
T ss_dssp HHSCCC--CCCCCTTCCEEECSSSCEEEE--ECCHHHHHHHHCGGGEEEEEEEECCHHHHTTTCCTTTEEEEEEEETTTT
T ss_pred HcCCCC--ccCCCCcCcEEEECCCceEEe--cCCHHHHHhhCCCCCEEEEEEeccchhhhhhccCCCcEEEEEEEecCCC
Confidence 997542 235677788877766665544 65541 11211 11110 0135689998873 5
Q ss_pred CEEEEEEEecCCHHH-HHHHHHHHHcCCCCCChhhhhccCCCcccC
Q 012545 416 GKVVGVFLESGTPEE-NKAIAKVARVQPSVESLDVLKNEGLSFASK 460 (461)
Q Consensus 416 ~~i~G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 460 (461)
|+|||+|++|+++.+ ++.++.+|++++|++||..+.-+.+++++.
T Consensus 453 ~~ilGa~i~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~E~ 498 (519)
T 3qfa_A 453 ERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAEV 498 (519)
T ss_dssp CEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCTTCGGGG
T ss_pred CEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhccccCCCChHHH
Confidence 999999999999888 689999999999999988888777777654
No 46
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=1e-44 Score=370.61 Aligned_cols=397 Identities=19% Similarity=0.208 Sum_probs=279.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCC------CCc------ccccccCCC-------------
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYE------RPA------LSKAYLFPE------------- 58 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~------~~~------~~~~~~~~~------------- 58 (461)
+.|||+|||||+||++||..|++.|++ |+|||+.+..++. ..| .++.++...
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~---V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g 81 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKK---VAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYG 81 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCe---EEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcC
Confidence 468999999999999999999999987 9999984322211 001 111111000
Q ss_pred -CCCCCCCcee--ecCC------CCCCCCHhHHHHcCcEEEcCCeEEEEeCCCCEEEcCCC--cEEecCEEEEccCCCcc
Q 012545 59 -GTARLPGFHV--CVGS------GGERLLPEWYKEKGIELILSTEIVRADIASKTLLSATG--LIFKYQILVIATGSTVS 127 (461)
Q Consensus 59 -~~~~~~~~~~--~~~~------~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~--~~~~~d~liiAtG~~~~ 127 (461)
.....+.+.+ .... .........++..+++++.+ .+..++.....+...++ .++.||+||||||++|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g-~~~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~p~ 160 (488)
T 3dgz_A 82 WEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNI-KASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPR 160 (488)
T ss_dssp CCCCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECC-EEEESSSSEEEEECTTSCEEEEEEEEEEECCCEEEC
T ss_pred cccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEccCCeEEEEeCCCceEEEECCEEEEcCCCCCC
Confidence 0000000000 0000 00001223455679999887 56655544445565666 47999999999999998
Q ss_pred ccc-cccccccCccccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHH
Q 012545 128 ITS-LTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELS 206 (461)
Q Consensus 128 ~~~-~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a 206 (461)
+|+ +||+.+. ++ +..++..+ ...+++++|||+|++|+|+|
T Consensus 161 ~p~~i~G~~~~-------------------------------~~---~~~~~~~~-----~~~~~~vvViGgG~ig~E~A 201 (488)
T 3dgz_A 161 YPTQVKGALEY-------------------------------GI---TSDDIFWL-----KESPGKTLVVGASYVALECA 201 (488)
T ss_dssp CCSSCBTHHHH-------------------------------CB---CHHHHTTC-----SSCCCSEEEECCSHHHHHHH
T ss_pred CCCCCCCcccc-------------------------------cC---cHHHHHhh-----hhcCCeEEEECCCHHHHHHH
Confidence 887 7776320 00 12222211 11478999999999999999
Q ss_pred HHHHHCCCcEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCC---Cc--EEecCE
Q 012545 207 AALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKD---GR--TLEADI 281 (461)
Q Consensus 207 ~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~---G~--~i~aD~ 281 (461)
..|++.|.+|+++++.+ +++. +++++.+.+.+.|++.||++++++.++++...+++.+ .+++.+ |+ ++++|.
T Consensus 202 ~~l~~~g~~Vtlv~~~~-~l~~-~d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~-~v~~~~~~~g~~~~~~~D~ 278 (488)
T 3dgz_A 202 GFLTGIGLDTTVMMRSI-PLRG-FDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQL-QVTWEDHASGKEDTGTFDT 278 (488)
T ss_dssp HHHHHTTCCEEEEESSC-SSTT-SCHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCE-EEEEEETTTTEEEEEEESE
T ss_pred HHHHHcCCceEEEEcCc-cccc-CCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcE-EEEEEeCCCCeeEEEECCE
Confidence 99999999999999864 5665 7999999999999999999999999999987444433 455543 54 479999
Q ss_pred EEEccCCCCChhhh---hcccccC--CCcEEeCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHH
Q 012545 282 VVVGVGGRPLISLF---KGQVAEN--KGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTI 356 (461)
Q Consensus 282 vi~a~G~~p~~~~~---~~~~~~~--~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i 356 (461)
|++|+|++|+++++ ..++..+ +|+|.||+++||+.|+|||+|||+.... ..+..|..||+.||.||
T Consensus 279 vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~---------~~~~~A~~~g~~aa~~i 349 (488)
T 3dgz_A 279 VLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQEATSVPHIYAIGDVAEGRP---------ELTPTAIKAGKLLAQRL 349 (488)
T ss_dssp EEECSCEEESCGGGTGGGGTCCBCSSSCCBCCCTTSBCSSTTEEECGGGBTTCC---------CCHHHHHHHHHHHHHHH
T ss_pred EEEcccCCcccCcCCccccCcEecCCCCeEeECCCCccCCCCEEEeEEecCCCC---------cchhHHHHHHHHHHHHH
Confidence 99999999999874 3455553 7899999999999999999999985321 46778999999999999
Q ss_pred hcccCCCcccCCCCCCeEEEecCCcceEEccCCC-------C-c--EEEecCCccc-------cCCCcEEEEEEe---CC
Q 012545 357 MATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV-------G-D--TVLFGDNDLA-------SATHKFGTYWIK---DG 416 (461)
Q Consensus 357 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~-------~-~--~~~~~~~~~~-------~~~~~~~~~~~~---~~ 416 (461)
++... ....|..+|+.+++.++++.+ |.++ + . .+......+. ..+.+|+|++++ +|
T Consensus 350 ~g~~~--~~~~~~~~p~~~~~~p~~a~v--Glte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ 425 (488)
T 3dgz_A 350 FGKSS--TLMDYSNVPTTVFTPLEYGCV--GLSEEEAVALHGQEHVEVYHAYYKPLEFTVADRDASQCYIKMVCMREPPQ 425 (488)
T ss_dssp HSCCC--CCCCCTTCCEEECSSSEEEEE--ECCHHHHHHHHCGGGEEEEEEECCCHHHHHTTCCCTTCEEEEEEESSTTC
T ss_pred cCCCC--ccCCCCCCCEEEECCCCeEEE--eCCHHHHHhhCCCCcEEEEEccccchhhhhhccCCCcEEEEEEEecCCCC
Confidence 97642 235677889887776665544 6554 1 1 1221111111 125789998874 69
Q ss_pred EEEEEEEecCCHHH-HHHHHHHHHcCCCCCChhhhhccCCCccc
Q 012545 417 KVVGVFLESGTPEE-NKAIAKVARVQPSVESLDVLKNEGLSFAS 459 (461)
Q Consensus 417 ~i~G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 459 (461)
+|||+|++|+++.+ ++.++.+|+++++++||..+.-+.+++++
T Consensus 426 ~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e 469 (488)
T 3dgz_A 426 LVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMQTVGIHPTCSE 469 (488)
T ss_dssp BEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSTH
T ss_pred EEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhccccCCCChHH
Confidence 99999999999888 68999999999999998887777777654
No 47
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=2.6e-45 Score=374.85 Aligned_cols=398 Identities=16% Similarity=0.114 Sum_probs=277.2
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCC---CCCCcccccccCCC----CCCCCCCceeecCC-
Q 012545 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP---YERPALSKAYLFPE----GTARLPGFHVCVGS- 72 (461)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~~~- 72 (461)
|++..+||+|||||+||++||..|++.|++ |+|||+++... +..|.+++.++... .....+.+......
T Consensus 4 M~~~~~DvvVIGgG~aGl~aA~~la~~G~~---V~liE~~~~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~ 80 (492)
T 3ic9_A 4 MKVINVDVAIIGTGTAGMGAYRAAKKHTDK---VVLIEGGAYGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRI 80 (492)
T ss_dssp CEEEEEEEEEECCSHHHHHHHHHHHTTCSC---EEEEESSCSSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEE
T ss_pred CccCCCCEEEECCCHHHHHHHHHHHhCCCc---EEEEeCCCCCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCC
Confidence 433358999999999999999999999987 99999985321 00111122221110 00111111110000
Q ss_pred --CC---CCCC-----------HhHHHH-cCcEEEcCCeEEEEeCCCCEEEcCCCcEEecCEEEEccCCCcccccccccc
Q 012545 73 --GG---ERLL-----------PEWYKE-KGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVSITSLTSIR 135 (461)
Q Consensus 73 --~~---~~~~-----------~~~~~~-~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~ 135 (461)
.. .... ...+.. .+++++.+. .... +.++|.+.+++++.||++|||||++|.+|.++|.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~-a~~~--~~~~v~~~~~~~~~~d~lViATGs~p~~p~~~~~- 156 (492)
T 3ic9_A 81 SVNGKAVMKRIQTERDRFVGFVVESVESFDEQDKIRGF-AKFL--DEHTLQVDDHSQVIAKRIVIATGSRPNYPEFLAA- 156 (492)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESC-EEEE--ETTEEEETTTEEEEEEEEEECCCEECCCCHHHHT-
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEE-EEEe--cCCEEEEcCCcEEEeCEEEEccCCCCcCCCCCCc-
Confidence 00 0000 011111 234455553 2222 3567888788889999999999999965544332
Q ss_pred ccCccccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCc
Q 012545 136 SKHCLCCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNID 215 (461)
Q Consensus 136 ~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~ 215 (461)
....+++. .++..+ ...+++++|||+|++|+|+|..|++.|.+
T Consensus 157 -----------------------------~~~~v~t~---~~~~~~-----~~~~k~vvViGgG~ig~E~A~~l~~~g~~ 199 (492)
T 3ic9_A 157 -----------------------------AGSRLLTN---DNLFEL-----NDLPKSVAVFGPGVIGLELGQALSRLGVI 199 (492)
T ss_dssp -----------------------------TGGGEECH---HHHTTC-----SSCCSEEEEESSCHHHHHHHHHHHHTTCE
T ss_pred -----------------------------cCCcEEcH---HHHhhh-----hhcCCeEEEECCCHHHHHHHHHHHHcCCe
Confidence 12234432 222221 11478999999999999999999999999
Q ss_pred EEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeC--CC--cEEecCEEEEccCCCCC
Q 012545 216 VSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK--DG--RTLEADIVVVGVGGRPL 291 (461)
Q Consensus 216 Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~--~G--~~i~aD~vi~a~G~~p~ 291 (461)
|+++++.+++++. +++++.+.+.+.|++. |++++++++++++.++++ + .+++. +| +++++|.||+|+|++|+
T Consensus 200 Vtlv~~~~~~l~~-~d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~-v-~v~~~~~~G~~~~i~~D~Vi~a~G~~p~ 275 (492)
T 3ic9_A 200 VKVFGRSGSVANL-QDEEMKRYAEKTFNEE-FYFDAKARVISTIEKEDA-V-EVIYFDKSGQKTTESFQYVLAATGRKAN 275 (492)
T ss_dssp EEEECCTTCCTTC-CCHHHHHHHHHHHHTT-SEEETTCEEEEEEECSSS-E-EEEEECTTCCEEEEEESEEEECSCCEES
T ss_pred EEEEEECCccccc-CCHHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCE-E-EEEEEeCCCceEEEECCEEEEeeCCccC
Confidence 9999999999876 7999999999999998 999999999999874333 3 45554 67 68999999999999999
Q ss_pred hhhh---hccccc-CCCcEEeC-CCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCccc
Q 012545 292 ISLF---KGQVAE-NKGGIETD-DFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVT 366 (461)
Q Consensus 292 ~~~~---~~~~~~-~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~ 366 (461)
++++ ..++.. ++|+|.|| +++||+.|+|||+|||++.+ +.+..|..||+.||.||++.... ...
T Consensus 276 ~~~l~l~~~gl~~~~~G~i~vd~~~~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~-~~~ 344 (492)
T 3ic9_A 276 VDKLGLENTSIELDKKNSPLFDELTLQTSVDHIFVAGDANNTL----------TLLHEAADDGKVAGTNAGAYPVI-AQG 344 (492)
T ss_dssp CSSSCGGGSCCCBCTTCCBCCCTTTCBCSSTTEEECGGGGTSS----------CSHHHHHHHHHHHHHHHHHTTSC-CEE
T ss_pred CCCCChhhcCCEECCCCCEeECcccccCCCCCEEEEEecCCCC----------ccHHHHHHHHHHHHHHHcCCCCC-ccc
Confidence 9863 335665 57899999 99999999999999999865 46788999999999999974321 224
Q ss_pred CCCCCCeEEEecCCcceEEccCCCC-----------cEEEec-----CCccc---cCCCcEEEEEE--eCCEEEEEEEec
Q 012545 367 GYDYLPYFYSRAFDLSWQFYGDNVG-----------DTVLFG-----DNDLA---SATHKFGTYWI--KDGKVVGVFLES 425 (461)
Q Consensus 367 ~~~~~p~~~~~~~~~~~~~~g~~~~-----------~~~~~~-----~~~~~---~~~~~~~~~~~--~~~~i~G~~~~g 425 (461)
.+..+|+..++.+++..+ |.++. ..+... ....+ ..+.+|.|+++ ++|+|||+|++|
T Consensus 345 ~~~~~p~~~~~~p~~a~v--Glte~~a~~~~g~~~g~~~~~~~~~~~~~~~a~~~~~~~g~~kli~~~~~~~ilG~~~~g 422 (492)
T 3ic9_A 345 QRRAPLSVVFTEPQVASV--GLSLRQIEDLYADQDAANYVVGQVSFEGQGRSRVMGKNKGLLNVYADRTSGEFLGAEMFG 422 (492)
T ss_dssp CCCCCEEEECSSSEEEEE--ESCHHHHHHHCSCSSSCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEE
T ss_pred CCCCCcEEEECCCCeEEe--cCCHHHHHhccCccCCccEEEEEEEeccchhhhhcCCCcEEEEEEEECCCCEEEEEEEEC
Confidence 566677766555555444 65431 122211 11111 24568999887 579999999999
Q ss_pred CCHHH-HHHHHHHHHcCCCCCChhhhhccCCCccc
Q 012545 426 GTPEE-NKAIAKVARVQPSVESLDVLKNEGLSFAS 459 (461)
Q Consensus 426 ~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 459 (461)
+++.+ ++.++.+|+.++|++||..+.-+.+++++
T Consensus 423 ~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e 457 (492)
T 3ic9_A 423 PAAEHIGHLLAWARQQQMTVQAMLTMPFYHPVIEE 457 (492)
T ss_dssp TTHHHHHHHHHHHHHTTCBHHHHTTSCCCTTCTHH
T ss_pred CCHHHHHHHHHHHHHCCCCHHHHhhCCCCCCChHH
Confidence 99988 58999999999999998877777776654
No 48
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=3e-43 Score=356.81 Aligned_cols=392 Identities=22% Similarity=0.265 Sum_probs=278.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCC----CCcccccccCCCC----CCCCCCceeecCC---C
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYE----RPALSKAYLFPEG----TARLPGFHVCVGS---G 73 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~----~~~~~~~~~~~~~----~~~~~~~~~~~~~---~ 73 (461)
.+||+|||||+||++||..|++.|++ |+|||+++..... .+..++.++.... ... +.+...... +
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~---V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~-~~~g~~~~~~~~~ 76 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMK---VGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKK-GLLGAKVKGVELD 76 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHH-CCTTEEECCEEEC
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCe---EEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhh-hcCCcccCCCccC
Confidence 37999999999999999999999987 9999998543210 0111111111000 000 000000000 0
Q ss_pred C--------------CCCCHhHHHHcCcEEEcCCeEEEEeCCCCEEEcC-CCcEEecCEEEEccCCCccccccccccccC
Q 012545 74 G--------------ERLLPEWYKEKGIELILSTEIVRADIASKTLLSA-TGLIFKYQILVIATGSTVSITSLTSIRSKH 138 (461)
Q Consensus 74 ~--------------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~-~~~~~~~d~liiAtG~~~~~~~~~g~~~~~ 138 (461)
. ......++++.+++++.++.+ .+ +.+.+.+. +++++.||++|+|||++|.+|++||
T Consensus 77 ~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~-~i--~~~~~~v~~~g~~~~~d~lviAtG~~p~~~~~~g----- 148 (455)
T 2yqu_A 77 LPALMAHKDKVVQANTQGVEFLFKKNGIARHQGTAR-FL--SERKVLVEETGEELEARYILIATGSAPLIPPWAQ----- 148 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEE-ES--SSSEEEETTTCCEEEEEEEEECCCEEECCCTTBC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEE-Ee--cCCeEEEeeCCEEEEecEEEECCCCCCCCCCCCC-----
Confidence 0 001134556679999998543 33 34444443 5678999999999999995544433
Q ss_pred ccccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEE
Q 012545 139 CLCCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSM 218 (461)
Q Consensus 139 ~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtl 218 (461)
.+..++++ ..++..+ . ..+++++|||+|++|+|+|..|++.|.+|++
T Consensus 149 -------------------------~~~~~v~~---~~~~~~~----~-~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~l 195 (455)
T 2yqu_A 149 -------------------------VDYERVVT---STEALSF----P-EVPKRLIVVGGGVIGLELGVVWHRLGAEVIV 195 (455)
T ss_dssp -------------------------CCSSSEEC---HHHHTCC----S-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred -------------------------CCcCcEec---hHHhhcc----c-cCCCeEEEECCCHHHHHHHHHHHHcCCEEEE
Confidence 22223443 2332221 1 1468999999999999999999999999999
Q ss_pred EccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChhh--hh
Q 012545 219 VYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISL--FK 296 (461)
Q Consensus 219 i~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~~--~~ 296 (461)
+++.+++++. +++++.+.+.+.+++.||+++++++|++++.+++ ...+++++|+++++|.||+|+|++|+.++ ++
T Consensus 196 v~~~~~~l~~-~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~--~v~v~~~~g~~i~~D~vv~A~G~~p~~~~l~~~ 272 (455)
T 2yqu_A 196 LEYMDRILPT-MDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAK--GARVELEGGEVLEADRVLVAVGRRPYTEGLSLE 272 (455)
T ss_dssp ECSSSSSCTT-SCHHHHHHHHHHHHHHTCEEECSCCEEEEEEETT--EEEEEETTSCEEEESEEEECSCEEECCTTCCGG
T ss_pred EecCCccccc-cCHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCC--EEEEEECCCeEEEcCEEEECcCCCcCCCCCChh
Confidence 9999998886 7999999999999999999999999999987332 24677788889999999999999999976 33
Q ss_pred -ccccc-CCCcEEeCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCcccCCCCCCeE
Q 012545 297 -GQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYF 374 (461)
Q Consensus 297 -~~~~~-~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~ 374 (461)
.++.. .+|+|.||+++||+.|+|||+|||+..+ ..+..|..||+.||.||.+.. ....+..+|++
T Consensus 273 ~~g~~~~~~g~i~vd~~~~t~~~~iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~---~~~~~~~~p~~ 339 (455)
T 2yqu_A 273 NAGLSTDERGRIPVDEHLRTRVPHIYAIGDVVRGP----------MLAHKASEEGIAAVEHMVRGF---GHVDYQAIPSV 339 (455)
T ss_dssp GGTCCCCTTSCCCCCTTSBCSSTTEEECGGGSSSC----------CCHHHHHHHHHHHHHHHHHSC---CCCCGGGCCEE
T ss_pred hcCCccCCCCcEeECCCcccCCCCEEEEecCCCCc----------cCHHHHHHhHHHHHHHHcCCC---ccCCCCCCCEE
Confidence 34555 4688999999999999999999999865 457789999999999999743 12345567765
Q ss_pred EEecCCcceEEccCCC------CcEEEecCCc-----cc---cCCCcEEEEEEe--CCEEEEEEEecCCHHH-HHHHHHH
Q 012545 375 YSRAFDLSWQFYGDNV------GDTVLFGDND-----LA---SATHKFGTYWIK--DGKVVGVFLESGTPEE-NKAIAKV 437 (461)
Q Consensus 375 ~~~~~~~~~~~~g~~~------~~~~~~~~~~-----~~---~~~~~~~~~~~~--~~~i~G~~~~g~~~~~-~~~~~~~ 437 (461)
....+ .+..+|.++ |..+...... .. ....+|.|++++ +|+|+|++++|+.+.+ ++.++.+
T Consensus 340 ~~~~~--~~a~~G~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~a 417 (455)
T 2yqu_A 340 VYTHP--EIAAVGYTEEELKAQGIPYKVGKFPYSASGRARAMGETEGFIKVLAHAKTDRILGVHGIGARVGDVLAEAALA 417 (455)
T ss_dssp ECSSS--EEEEEECCHHHHHHHTCCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHH
T ss_pred EEcCC--ceEEEECCHHHHHHcCCCEEEEEEEcccchHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHH
Confidence 54434 444556543 3223222111 10 235678898884 8999999999998877 6899999
Q ss_pred HHcCCCCCChhhhhccCCCccc
Q 012545 438 ARVQPSVESLDVLKNEGLSFAS 459 (461)
Q Consensus 438 ~~~~~~~~~~~~l~~~~~~~~~ 459 (461)
|.++++++++..+..+.++|.+
T Consensus 418 i~~~~~~~~~~~~~~~~Pt~~e 439 (455)
T 2yqu_A 418 LFFKASAEDLGRAPHAHPSLSE 439 (455)
T ss_dssp HHTTCBHHHHHHSCCCSSCTHH
T ss_pred HHCCCCHHHHhhcccCCCCHHH
Confidence 9999999988877777776654
No 49
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.5e-43 Score=357.34 Aligned_cols=386 Identities=21% Similarity=0.213 Sum_probs=274.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCC--CC-CCcccccccCCC---------CC---CCCCCceee
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP--YE-RPALSKAYLFPE---------GT---ARLPGFHVC 69 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~--~~-~~~~~~~~~~~~---------~~---~~~~~~~~~ 69 (461)
.+||+|||||+||++||..|++.|++ |+|||++.... .. .+.+++.++... .. ..++.-.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~---V~lie~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~-- 79 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIP---TVLVEGQALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVAS-- 79 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCC---EEEECSSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCC--
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCE---EEEEccCCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCC--
Confidence 58999999999999999999999986 99999954210 00 111122211000 00 0110000
Q ss_pred cCCCCC--------------CCCHhHHHHcCcEEEcCCeEEEEeCCCCEEEcCCCcEEecCEEEEccCCCcccccccccc
Q 012545 70 VGSGGE--------------RLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVSITSLTSIR 135 (461)
Q Consensus 70 ~~~~~~--------------~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~ 135 (461)
...+.. ....+++++.+++++.++.+. ++ .+++.+.+ +++.||+||+|||++|..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~-~~--~~~v~v~~-~~~~~d~lviATGs~p~~------- 148 (458)
T 1lvl_A 80 PRLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKV-LD--GKQVEVDG-QRIQCEHLLLATGSSSVE------- 148 (458)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEE-EE--TTEEEETT-EEEECSEEEECCCEEECC-------
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEE-cc--CCEEEEee-EEEEeCEEEEeCCCCCCC-------
Confidence 000000 001245677899999986544 43 56787765 679999999999999843
Q ss_pred ccCccccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCc
Q 012545 136 SKHCLCCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNID 215 (461)
Q Consensus 136 ~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~ 215 (461)
+|. ++ .+. .++ +..++..+. ..+++++|||+|++|+|+|..|++.|.+
T Consensus 149 --------------------~~~--~~-~~~-~v~---~~~~~~~~~-----~~~~~vvViGgG~~g~e~A~~l~~~g~~ 196 (458)
T 1lvl_A 149 --------------------LPM--LP-LGG-PVI---SSTEALAPK-----ALPQHLVVVGGGYIGLELGIAYRKLGAQ 196 (458)
T ss_dssp --------------------BTT--BC-CBT-TEE---CHHHHTCCS-----SCCSEEEEECCSHHHHHHHHHHHHHTCE
T ss_pred --------------------CCC--CC-ccC-cEe---cHHHHhhhh-----ccCCeEEEECcCHHHHHHHHHHHHCCCe
Confidence 221 12 111 333 333333221 1478999999999999999999999999
Q ss_pred EEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCC--cEEecCEEEEccCCCCChh
Q 012545 216 VSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDG--RTLEADIVVVGVGGRPLIS 293 (461)
Q Consensus 216 Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G--~~i~aD~vi~a~G~~p~~~ 293 (461)
|+++++.+++++. +++++.+.+.+.+++.||+++++++|++++. ++ ..+.+.+| +++++|.||+|+|++|+.+
T Consensus 197 Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~--~~--v~v~~~~G~~~~i~~D~vv~a~G~~p~~~ 271 (458)
T 1lvl_A 197 VSVVEARERILPT-YDSELTAPVAESLKKLGIALHLGHSVEGYEN--GC--LLANDGKGGQLRLEADRVLVAVGRRPRTK 271 (458)
T ss_dssp EEEECSSSSSSTT-SCHHHHHHHHHHHHHHTCEEETTCEEEEEET--TE--EEEECSSSCCCEECCSCEEECCCEEECCS
T ss_pred EEEEEcCCccccc-cCHHHHHHHHHHHHHCCCEEEECCEEEEEEe--CC--EEEEECCCceEEEECCEEEECcCCCcCCC
Confidence 9999999999985 8999999999999999999999999999975 22 34554566 6899999999999999998
Q ss_pred hh---hccccc-CCCcEEeCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCcccCCC
Q 012545 294 LF---KGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYD 369 (461)
Q Consensus 294 ~~---~~~~~~-~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~ 369 (461)
++ ..++.. ++ +|.||+++||+.|+|||+|||+..+ ..+..|..||+.||.||.+.. ....|.
T Consensus 272 ~l~~~~~g~~~~~~-~i~vd~~~~t~~~~Iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~---~~~~~~ 337 (458)
T 1lvl_A 272 GFNLECLDLKMNGA-AIAIDERCQTSMHNVWAIGDVAGEP----------MLAHRAMAQGEMVAEIIAGKA---RRFEPA 337 (458)
T ss_dssp SSSGGGSCCCEETT-EECCCTTCBCSSTTEEECGGGGCSS----------CCHHHHHHHHHHHHHHHTTCC---CCCCCS
T ss_pred CCCcHhcCCcccCC-EEeECCCCcCCCCCEEEeeccCCCc----------ccHHHHHHHHHHHHHHhcCCC---ccCCCC
Confidence 53 334554 34 9999999999999999999999865 467789999999999999743 124566
Q ss_pred CCCeEEEecCCcceEEccCCC------CcEEEecCC-----ccc---cCCCcEEEEEE--eCCEEEEEEEecCCHHH-HH
Q 012545 370 YLPYFYSRAFDLSWQFYGDNV------GDTVLFGDN-----DLA---SATHKFGTYWI--KDGKVVGVFLESGTPEE-NK 432 (461)
Q Consensus 370 ~~p~~~~~~~~~~~~~~g~~~------~~~~~~~~~-----~~~---~~~~~~~~~~~--~~~~i~G~~~~g~~~~~-~~ 432 (461)
.+|++....++ +..+|.++ |..+..+.. ... ....+|.|+++ ++++|+|++++|+.+.+ ++
T Consensus 338 ~~p~~~~~~p~--~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~kl~~d~~~~~ilG~~~vg~~a~e~i~ 415 (458)
T 1lvl_A 338 AIAAVCFTDPE--VVVVGKTPEQASQQGLDCIVAQFPFAANGRAMSLESKSGFVRVVARRDNHLILGWQAVGVAVSELST 415 (458)
T ss_dssp CCCEEECSSSE--EEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTGGGHHH
T ss_pred CCCEEEECCCC--eEEEeCCHHHHHHcCCCEEEEEEECccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHH
Confidence 67866544444 44556543 322222211 111 23567898888 57999999999998877 78
Q ss_pred HHHHHHHcCCCCCChhhhhccCCCccc
Q 012545 433 AIAKVARVQPSVESLDVLKNEGLSFAS 459 (461)
Q Consensus 433 ~~~~~~~~~~~~~~~~~l~~~~~~~~~ 459 (461)
.++.+|+++++++|+..+.-+.+++++
T Consensus 416 ~~~~ai~~~~~~~~l~~~~~~~Pt~~e 442 (458)
T 1lvl_A 416 AFAQSLEMGACLEDVAGTIHAHPTLGE 442 (458)
T ss_dssp HHHHHHHHTCBHHHHHTSCCCTTCTTH
T ss_pred HHHHHHHCCCCHHHHhhCcCCCCCHHH
Confidence 999999999999888877666666654
No 50
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=100.00 E-value=4.3e-42 Score=359.74 Aligned_cols=396 Identities=17% Similarity=0.196 Sum_probs=273.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCC----CC--C-----Ccc-cccccCCC-----------CC
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP----YE--R-----PAL-SKAYLFPE-----------GT 60 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~----~~--~-----~~~-~~~~~~~~-----------~~ 60 (461)
..+||+|||||+||++||..|++.|++ |+|+|+....+ |. . .+. ++.+.... ..
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~---v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g 182 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAK---TAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFG 182 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCC---EEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCe---EEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCC
Confidence 468999999999999999999999987 99999842211 10 0 000 11000000 00
Q ss_pred CCCCCceeecCCCCCCC---------------CHhHHHHcCcEEEcCCeEEEEeCCCCEEEcCCC--cEEecCEEEEccC
Q 012545 61 ARLPGFHVCVGSGGERL---------------LPEWYKEKGIELILSTEIVRADIASKTLLSATG--LIFKYQILVIATG 123 (461)
Q Consensus 61 ~~~~~~~~~~~~~~~~~---------------~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~--~~~~~d~liiAtG 123 (461)
...+... ... .... ....++..+++++.+ ....++.....+...+| +++.||+||||||
T Consensus 183 ~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~-~~~~~~~~~v~v~~~~g~~~~~~~d~lviAtG 258 (598)
T 2x8g_A 183 WSLDRSK--ISH-NWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNA-KGRLISPHEVQITDKNQKVSTITGNKIILATG 258 (598)
T ss_dssp CCCCGGG--CCC-CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEETTEEEEECTTCCEEEEEEEEEEECCC
T ss_pred ccccCCc--Ccc-CHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEE-EEEEcCCCEEEEEeCCCCeEEEEeCEEEEeCC
Confidence 0000000 000 0000 111245678998886 56666654444555556 4689999999999
Q ss_pred CCccccccccccccCccccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHH
Q 012545 124 STVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGL 203 (461)
Q Consensus 124 ~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~ 203 (461)
++|.+|++||..++ .++ .+++..+ ...+++++|||+|++|+
T Consensus 259 s~p~~p~i~G~~~~-------------------------------~~~---~~~~~~~-----~~~~~~vvViGgG~~g~ 299 (598)
T 2x8g_A 259 ERPKYPEIPGAVEY-------------------------------GIT---SDDLFSL-----PYFPGKTLVIGASYVAL 299 (598)
T ss_dssp EEECCCSSTTHHHH-------------------------------CEE---HHHHTTC-----SSCCCSEEEECCSHHHH
T ss_pred CCCCCCCCCCcccc-------------------------------eEc---HHHHhhC-----ccCCCEEEEECCCHHHH
Confidence 99977766664310 111 1111111 11468999999999999
Q ss_pred HHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEec-----CC---CCE-EEEEeCCC
Q 012545 204 ELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTN-----AD---GEV-KEVKLKDG 274 (461)
Q Consensus 204 e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~-----~~---g~~-~~v~~~~G 274 (461)
|+|..|++.|.+|+++++. .+++. +++++.+.+.+.|++.||++++++.++++... ++ +.+ ..+.+.+|
T Consensus 300 E~A~~l~~~g~~Vtlv~~~-~~l~~-~d~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g 377 (598)
T 2x8g_A 300 ECAGFLASLGGDVTVMVRS-ILLRG-FDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDG 377 (598)
T ss_dssp HHHHHHHHTTCCEEEEESS-CSSTT-SCHHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTS
T ss_pred HHHHHHHHcCCEEEEEECC-cCcCc-CCHHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCC
Confidence 9999999999999999987 66665 79999999999999999999999988888642 11 322 23345688
Q ss_pred cEEe--cCEEEEccCCCCChhhh---hccccc-CCCcEEeCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHH
Q 012545 275 RTLE--ADIVVVGVGGRPLISLF---KGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKS 348 (461)
Q Consensus 275 ~~i~--aD~vi~a~G~~p~~~~~---~~~~~~-~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~ 348 (461)
++++ +|.||+|+|++||++++ ..++.. .+|+|.||+++||+.|+|||+|||+.... ..+..|..|
T Consensus 378 ~~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~ts~~~VyA~GD~~~~~~---------~~~~~A~~~ 448 (598)
T 2x8g_A 378 KKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDEQTTVSNVYAIGDINAGKP---------QLTPVAIQA 448 (598)
T ss_dssp CEEEEEESEEEECSCEEECGGGTBCGGGCCCBCTTSCBCCCTTSBCSSTTEEECGGGBTTSC---------CCHHHHHHH
T ss_pred cEEeccCCEEEEEeCCccccCccCchhcCceECCCCcEEeCCCCcCCCCCEEEEeeecCCCC---------ccHHHHHHh
Confidence 7665 99999999999999864 335655 57889999999999999999999965321 467889999
Q ss_pred HHHHHHHHhcccCCCcccCCCCCCeEEEecCCcceEEccCCC-------Cc-EEEec--CCcc---c----cCCCcEEEE
Q 012545 349 AEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV-------GD-TVLFG--DNDL---A----SATHKFGTY 411 (461)
Q Consensus 349 g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~-------~~-~~~~~--~~~~---~----~~~~~~~~~ 411 (461)
|+.||.+|++... ....|..+|+.+++.+++..+ |.++ +. .+... ...+ . ....+|.|+
T Consensus 449 g~~aa~~i~~~~~--~~~~~~~~p~~~~~~~~~a~v--Gl~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl 524 (598)
T 2x8g_A 449 GRYLARRLFAGAT--ELTDYSNVATTVFTPLEYGAC--GLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAHREDNVCYMKL 524 (598)
T ss_dssp HHHHHHHHHHCCC--CCCCCTTCCEEECSSSCEEEE--ECCHHHHHHHHCGGGEEEEEEEECCTHHHHTTCCSSCEEEEE
T ss_pred HHHHHHHHhcCCC--cccCCCCCcEEEECCCceEEE--eCCHHHHHhhCCCCcEEEEEEeccchhHHhhcCCCCcEEEEE
Confidence 9999999997542 235677788877766665554 5443 21 11111 1111 0 124578888
Q ss_pred EEe---CCEEEEEEEecCCHHH-HHHHHHHHHcCCCCCChhhhhccCCCcccC
Q 012545 412 WIK---DGKVVGVFLESGTPEE-NKAIAKVARVQPSVESLDVLKNEGLSFASK 460 (461)
Q Consensus 412 ~~~---~~~i~G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 460 (461)
+++ +|+|+|++++|+.+.+ ++.++.+|+++++++|+..+.-+.+++++.
T Consensus 525 i~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~ 577 (598)
T 2x8g_A 525 VCRKSDNMRVLGLHVLGPNAGEITQGYAVAIKMGATKADFDRTIGIHPTCSET 577 (598)
T ss_dssp EEETTTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCSGGG
T ss_pred EEecCCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhhccccCCCHHHH
Confidence 774 7999999999998888 689999999999999988877777777653
No 51
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.7e-39 Score=313.09 Aligned_cols=299 Identities=20% Similarity=0.223 Sum_probs=211.6
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHh
Q 012545 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPE 80 (461)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (461)
|....|||+||||||||++||.+|+++|++ |+|||++... +.++......++|.+....+.+.......
T Consensus 2 Mte~~yDvvIIG~GpAGl~aA~~l~~~g~~---V~liE~~~~g--------G~~~~~~~i~~~p~~~~~~~~~~~~~~~~ 70 (312)
T 4gcm_A 2 MTEIDFDIAIIGAGPAGMTAAVYASRANLK---TVMIERGIPG--------GQMANTEEVENFPGFEMITGPDLSTKMFE 70 (312)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCTT--------GGGGGCSCBCCSTTCSSBCHHHHHHHHHH
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCC---EEEEecCCCC--------CeeecccccCCcCCccccchHHHHHHHHH
Confidence 544579999999999999999999999987 9999987421 11221111223333322111111122344
Q ss_pred HHHHcCcEEEcCCeEEEEeCCCCEEEcCCCcEEecCEEEEccCCCccccccccccccCccccccccCCcccccccccCCC
Q 012545 81 WYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFG 160 (461)
Q Consensus 81 ~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~ 160 (461)
+..+.+..+..+..+...+.....+...+++++.||++|||||++|..|+|||...
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~liiAtGs~~~~~~ipG~~~------------------------ 126 (312)
T 4gcm_A 71 HAKKFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKKIGVPGEQE------------------------ 126 (312)
T ss_dssp HHHHTTCEEEECCCCEEEECSSCEEEECSSCEEEEEEEEECCCEEECCCCCTTTTT------------------------
T ss_pred HHhhccccccceeeeeeeeeecceeeccCCeEEEeceeEEcccCccCcCCCCChhh------------------------
Confidence 55567777777767777777677777778888999999999999997777777532
Q ss_pred CCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHH
Q 012545 161 VEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEG 240 (461)
Q Consensus 161 ~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~ 240 (461)
+ ....++++...+ .. ..++++++|||+|++|+|+|..|++.|.+||++++.+++++.. ....+
T Consensus 127 ~---~~~~v~~~~~~~-~~-------~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~~~------~~~~~ 189 (312)
T 4gcm_A 127 L---GGRGVSYCAVCD-GA-------FFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQR------ILQDR 189 (312)
T ss_dssp T---BTTTEESCHHHH-GG-------GGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSCH------HHHHH
T ss_pred h---CCccEEeeeccC-cc-------ccCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccCcch------hHHHH
Confidence 0 112333322111 11 1257899999999999999999999999999999999887641 12345
Q ss_pred HHHhcCcEEEcCCcEEEEEecCCCC--EEEEEe--CCCcEEecCEEEEccCCCCChhhhhcc-cccCCCcEEeCCCCCCC
Q 012545 241 YYANKGIKIIKGTVAVGFTTNADGE--VKEVKL--KDGRTLEADIVVVGVGGRPLISLFKGQ-VAENKGGIETDDFFKTS 315 (461)
Q Consensus 241 ~l~~~GV~v~~~~~v~~i~~~~~g~--~~~v~~--~~G~~i~aD~vi~a~G~~p~~~~~~~~-~~~~~g~i~vd~~~~t~ 315 (461)
.+++.++.......+......+... ...... .++..+++|.|++++|.+|+..++... +..++|+|.||++||||
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~~g~~~~~G~I~vd~~~~Ts 269 (312)
T 4gcm_A 190 AFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGITNDVGYIVTKDDMTTS 269 (312)
T ss_dssp HHHCTTEEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGGGGTCBCTTSCBCCCTTSBCS
T ss_pred HHHhcCcceeeecceeeeeccccccccceeeeecCCceeEEeeeeEEeecCCCcCchhHHhcceecCCCeEeeCCCCccC
Confidence 6677888888877776665522111 111112 233579999999999999999888654 44478999999999999
Q ss_pred CCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhccc
Q 012545 316 ADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATE 360 (461)
Q Consensus 316 ~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 360 (461)
+|+|||+|||++.+. .++..|..||+.||.+|...+
T Consensus 270 ~pgIyA~GDv~~~~~---------~~~~~A~~~G~~AA~~i~~~L 305 (312)
T 4gcm_A 270 VPGIFAAGDVRDKGL---------RQIVTATGDGSIAAQSAAEYI 305 (312)
T ss_dssp STTEEECSTTBSCSC---------CSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeecCCCcc---------hHHHHHHHHHHHHHHHHHHHH
Confidence 999999999997542 467889999999999997543
No 52
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=5.7e-40 Score=334.92 Aligned_cols=298 Identities=20% Similarity=0.283 Sum_probs=228.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHH-
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY- 82 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 82 (461)
.+++|||||||+||+++|..|++.+++ |+|||+++++.|. |.+.... . ..+..-. .........
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~---VtLId~~~~~~~~-PlL~~va-~----G~l~~~~------i~~p~~~~~~ 105 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYN---VSIISPRSYFLFT-PLLPSAP-V----GTVDEKS------IIEPIVNFAL 105 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCE---EEEEESSSEEECG-GGGGGTT-T----TSSCGGG------GEEEHHHHHT
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCc---EEEECCCCCcccc-cchhHHh-h----ccccHHH------hhhhHHHHHH
Confidence 357899999999999999999876655 9999999876653 4332110 0 0010000 000112222
Q ss_pred -HHcCcEEEcCCeEEEEeCCCCEEEcC--------------------CCcEEecCEEEEccCCCccccccccccccCccc
Q 012545 83 -KEKGIELILSTEIVRADIASKTLLSA--------------------TGLIFKYQILVIATGSTVSITSLTSIRSKHCLC 141 (461)
Q Consensus 83 -~~~~v~~~~~~~v~~i~~~~~~v~~~--------------------~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~ 141 (461)
++.+++++.+ +|++||++.++|.+. ++.++.||+||||||+.+..+.+||++
T Consensus 106 ~~~~~v~~~~~-~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~ipG~~------ 178 (502)
T 4g6h_A 106 KKKGNVTYYEA-EATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVT------ 178 (502)
T ss_dssp TCSSCEEEEEE-EEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTTCTTHH------
T ss_pred hhcCCeEEEEE-EEEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCCccCcc------
Confidence 2357889887 899999999988652 356799999999999999766666653
Q ss_pred cccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhc---------------CCCcEEEECCCHHHHHHH
Q 012545 142 CFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAK---------------KNGKAVVVGGGYIGLELS 206 (461)
Q Consensus 142 ~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~---------------~~~~v~VvG~G~~g~e~a 206 (461)
++.+.+++++++.++++.+... ...+++|||+|++|+|+|
T Consensus 179 -------------------------e~a~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A 233 (502)
T 4g6h_A 179 -------------------------DYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAA 233 (502)
T ss_dssp -------------------------HHCEECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHH
T ss_pred -------------------------cccCCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhH
Confidence 2345678899988887665321 124799999999999999
Q ss_pred HHHHHC--------------CCcEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeC
Q 012545 207 AALKIN--------------NIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK 272 (461)
Q Consensus 207 ~~l~~~--------------g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~ 272 (461)
.+|.++ ..+|+++++.+++++. +++++++.+.+.|++.||+++++++|++++. ++......+.
T Consensus 234 ~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~-~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~--~~~~~~~~~~ 310 (502)
T 4g6h_A 234 GELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNM-FEKKLSSYAQSHLENTSIKVHLRTAVAKVEE--KQLLAKTKHE 310 (502)
T ss_dssp HHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHTTCEEETTEEEEEECS--SEEEEEEECT
T ss_pred HHHHHHHHHHHHhhcccccccceeEEeccccccccC-CCHHHHHHHHHHHHhcceeeecCceEEEEeC--CceEEEEEec
Confidence 998764 3689999999999997 8999999999999999999999999999964 5555566667
Q ss_pred CCc----EEecCEEEEccCCCCChh---hh-hccccc-CCCcEEeCCCCCC-CCCCEEEeCcccccCccccCcceeeccH
Q 012545 273 DGR----TLEADIVVVGVGGRPLIS---LF-KGQVAE-NKGGIETDDFFKT-SADDVYAVGDVATFPMKLYREMRRVEHV 342 (461)
Q Consensus 273 ~G~----~i~aD~vi~a~G~~p~~~---~~-~~~~~~-~~g~i~vd~~~~t-~~~~vya~GD~~~~~~~~~~~~~~~~~~ 342 (461)
||+ ++++|.||||+|.+|+.. +. ..+... .+|+|.||++||| ++|||||+|||+..+.+ +..
T Consensus 311 dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~~~~~~~~~~~g~I~Vd~~lq~~~~~~IfAiGD~a~~~~p--------~~a 382 (502)
T 4g6h_A 311 DGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAFAGLP--------PTA 382 (502)
T ss_dssp TSCEEEEEEECSEEEECCCEECCHHHHHHHHHSGGGTTCCSSEEBCTTSBBTTCSSEEECGGGEESSSC--------CCH
T ss_pred CcccceeeeccCEEEEccCCcCCHHHHhHHHhccccccCCCceeECCccccCCCCCEEEEEcccCCCCC--------Cch
Confidence 774 699999999999999853 22 223333 5789999999999 89999999999987755 678
Q ss_pred HHHHHHHHHHHHHHhcc
Q 012545 343 DHARKSAEQAVKTIMAT 359 (461)
Q Consensus 343 ~~A~~~g~~aa~~i~~~ 359 (461)
..|.+||+++|+||.+.
T Consensus 383 ~~A~qqg~~~A~ni~~~ 399 (502)
T 4g6h_A 383 QVAHQEAEYLAKNFDKM 399 (502)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 89999999999999653
No 53
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=1.3e-38 Score=309.74 Aligned_cols=305 Identities=17% Similarity=0.198 Sum_probs=222.4
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCC-CCCCCCceeecCCCCCCCCH
Q 012545 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEG-TARLPGFHVCVGSGGERLLP 79 (461)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 79 (461)
||++.+||+|||||+||+++|..|++.|++ |+|+|+++..... + . ...+.. ....+.+...........+.
T Consensus 1 m~~~~~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~~gg~-~--~--~~~~~~~~~~~~~~~~~~~~~~~~~l~ 72 (335)
T 2zbw_A 1 MAADHTDVLIVGAGPTGLFAGFYVGMRGLS---FRFVDPLPEPGGQ-L--T--ALYPEKYIYDVAGFPKVYAKDLVKGLV 72 (335)
T ss_dssp --CCEEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSSSCHH-H--H--HTCTTSEECCSTTCSSEEHHHHHHHHH
T ss_pred CCCCcCcEEEECCCHHHHHHHHHHHhCCCC---EEEEeCCCCCCCe-e--e--ccCCCceeeccCCCCCCCHHHHHHHHH
Confidence 777789999999999999999999999886 9999998653211 0 0 000000 01111111100001111233
Q ss_pred hHHHHcCcEEEcCCeEEEEeCCCC--EEEcCCCcEEecCEEEEccCCC---ccccccccccccCccccccccCCcccccc
Q 012545 80 EWYKEKGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGST---VSITSLTSIRSKHCLCCFFLRTLPLFQVL 154 (461)
Q Consensus 80 ~~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~liiAtG~~---~~~~~~~g~~~~~~~~~~~~~~~p~~~~~ 154 (461)
+.+++.+++++.+++|..++.+.. .+.+.+++++.||+||+|||+. |..|++||...
T Consensus 73 ~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~~~~i~g~~~------------------ 134 (335)
T 2zbw_A 73 EQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPRRIGAPGERE------------------ 134 (335)
T ss_dssp HHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSEEEECCCCCTTTTT------------------
T ss_pred HHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCCCCCCCCCCCChhh------------------
Confidence 445567899998989999887653 4666677789999999999994 54445555321
Q ss_pred cccCCCCCCCCCCCEEE-eCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHH
Q 012545 155 RLTDFGVEGADAKNIFY-LREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTAD 233 (461)
Q Consensus 155 ~~~~~~~~g~~~~~v~~-~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~ 233 (461)
+. ...+++ +.+.. ...+++++|+|+|++|+|+|..|.+.|.+|+++++.+.+.+ .++
T Consensus 135 ------~~---~~~~~~~~~~~~----------~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~---~~~ 192 (335)
T 2zbw_A 135 ------FE---GRGVYYAVKSKA----------EFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA---HEA 192 (335)
T ss_dssp ------TB---TTTEESSCSCGG----------GGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS---CHH
T ss_pred ------cc---CcEEEEecCchh----------hcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc---cHH
Confidence 00 112221 12221 11478999999999999999999999999999999988765 467
Q ss_pred HHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeC---CC--cEEecCEEEEccCCCCChhhhhc-ccccCCCcEE
Q 012545 234 IAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK---DG--RTLEADIVVVGVGGRPLISLFKG-QVAENKGGIE 307 (461)
Q Consensus 234 ~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~---~G--~~i~aD~vi~a~G~~p~~~~~~~-~~~~~~g~i~ 307 (461)
..+.+.+.+++.||+++++++++++.. ++.+..|++. +| +++++|.||+|+|++|+.++++. ++..++|+|.
T Consensus 193 ~~~~l~~~l~~~gv~v~~~~~v~~i~~--~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i~ 270 (335)
T 2zbw_A 193 SVKELMKAHEEGRLEVLTPYELRRVEG--DERVRWAVVFHNQTQEELALEVDAVLILAGYITKLGPLANWGLALEKNKIK 270 (335)
T ss_dssp HHHHHHHHHHTTSSEEETTEEEEEEEE--SSSEEEEEEEETTTCCEEEEECSEEEECCCEEEECGGGGGSCCCEETTEEE
T ss_pred HHHHHHhccccCCeEEecCCcceeEcc--CCCeeEEEEEECCCCceEEEecCEEEEeecCCCCchHhhhcceeccCCeee
Confidence 788888999999999999999999987 4555567765 77 67999999999999999887754 4555679999
Q ss_pred eCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCC
Q 012545 308 TDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGG 362 (461)
Q Consensus 308 vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 362 (461)
||+++||+.|+|||+|||+..+.. ...+..|..||+.||.+|.+...+
T Consensus 271 vd~~~~t~~~~vya~GD~~~~~~~-------~~~~~~A~~~g~~aa~~i~~~l~~ 318 (335)
T 2zbw_A 271 VDTTMATSIPGVYACGDIVTYPGK-------LPLIVLGFGEAAIAANHAAAYANP 318 (335)
T ss_dssp CCTTCBCSSTTEEECSTTEECTTC-------CCCHHHHHHHHHHHHHHHHHHHCT
T ss_pred eCCCCCCCCCCEEEeccccccCcc-------hhhhhhhHHHHHHHHHHHHHHhhh
Confidence 999999999999999999976431 157889999999999999887644
No 54
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=5.4e-39 Score=309.56 Aligned_cols=301 Identities=19% Similarity=0.174 Sum_probs=209.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCC--CCCCcccccccCCCCCCCCCCceeec-CCCCCCCC
Q 012545 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP--YERPALSKAYLFPEGTARLPGFHVCV-GSGGERLL 78 (461)
Q Consensus 2 m~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 78 (461)
|++.|||+||||||||++||.+|+++|++ |+|+|++.... ...+..++..+ .+++++.... +.+.....
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g~~---v~liE~~~~gg~~~~G~~~~~~~i-----~~~~g~~~~i~~~~l~~~~ 72 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSLK---PVMYEGFMAGGVAAGGQLTTTTII-----ENFPGFPNGIDGNELMMNM 72 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCC---CEEECCSSGGGCCTTCGGGGSSEE-----CCSTTCTTCEEHHHHHHHH
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCC---EEEEecCCCCCcccCCCcCChHHh-----hhccCCcccCCHHHHHHHH
Confidence 56689999999999999999999999987 99999985321 11111111111 2233332111 00111233
Q ss_pred HhHHHHcCcEEEcCCeEEEEeCCC--CEEEcCCCcEEecCEEEEccCCCccccccccccccCccccccccCCcccccccc
Q 012545 79 PEWYKEKGIELILSTEIVRADIAS--KTLLSATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRL 156 (461)
Q Consensus 79 ~~~~~~~~v~~~~~~~v~~i~~~~--~~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~ 156 (461)
.+.+.+.++++... .+....... ..+.+.++.++.||++|||||++|..|.+||....
T Consensus 73 ~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~~~~ipG~~~~------------------- 132 (314)
T 4a5l_A 73 RTQSEKYGTTIITE-TIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKRMHVPGEDKY------------------- 132 (314)
T ss_dssp HHHHHHTTCEEECC-CEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEECCCCCTTHHHH-------------------
T ss_pred HHHHhhcCcEEEEe-EEEEeecCCCceEEEECCCeEEEEeEEEEcccccccccCCCccccc-------------------
Confidence 44556788888776 555555443 34667788889999999999999987777776420
Q ss_pred cCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHH
Q 012545 157 TDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAA 236 (461)
Q Consensus 157 ~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~ 236 (461)
....+... ...... ....++++++|||+|++|+|+|..|+++|.+||++++.+.... ...
T Consensus 133 --------~~~~~~~~---~~~~~~---~~~~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~~---~~~--- 192 (314)
T 4a5l_A 133 --------WQNGVSAC---AICDGA---VPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRA---SKT--- 192 (314)
T ss_dssp --------BTTTEESC---HHHHTT---SGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS---CHH---
T ss_pred --------cccceeee---hhhhhh---hhhcCCCeEEEECCChHHHHHHHHHHHhCCeeeeecccccccc---cch---
Confidence 00111111 111111 1112578999999999999999999999999999998876543 222
Q ss_pred HHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEe-----CCCcEEecCEEEEccCCCCChhhhhcccccCCCcEEeCCC
Q 012545 237 FYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKL-----KDGRTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDF 311 (461)
Q Consensus 237 ~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~-----~~G~~i~aD~vi~a~G~~p~~~~~~~~~~~~~g~i~vd~~ 311 (461)
...+.+...+++.+....+.++... ++....+.+ .+++++++|.|++++|++||++++...+...++++.||++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~pn~~~l~~~~~~~~~G~iv~~~ 271 (314)
T 4a5l_A 193 MQERVLNHPKIEVIWNSELVELEGD-GDLLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLGGQVKTADDGYILTEG 271 (314)
T ss_dssp HHHHHHTCTTEEEECSEEEEEEEES-SSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTSSCBCTTSCBCCBT
T ss_pred hhhhhhcccceeeEeeeeeEEEEee-eeccceeEEeecccccceeeccccceEecccccChhHhcccceEcCCeeEeCCC
Confidence 3345566778899988888888863 333333333 3456899999999999999999998777665555669999
Q ss_pred CCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhccc
Q 012545 312 FKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATE 360 (461)
Q Consensus 312 ~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 360 (461)
+|||+|+|||+|||++.+. .++..|..||+.||.++...+
T Consensus 272 ~~Ts~pgIyA~GDv~~~~~---------~~~~~A~~~G~~AA~~~~~yL 311 (314)
T 4a5l_A 272 PKTSVDGVFACGDVCDRVY---------RQAIVAAGSGCMAALSCEKWL 311 (314)
T ss_dssp TBCSSTTEEECSTTTCSSC---------CCHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEEEeccCCcc---------hHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998764 467789999999999987543
No 55
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=2.1e-38 Score=306.24 Aligned_cols=302 Identities=20% Similarity=0.204 Sum_probs=225.6
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeec-CCCCCCCCH
Q 012545 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCV-GSGGERLLP 79 (461)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 79 (461)
|||+.+||+|||||+||+++|..|++.|++ |+|+|+.... ..+........++.+.... .........
T Consensus 1 ~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~g--------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (320)
T 1trb_A 1 GTTKHSKLLILGSGPAGYTAAVYAARANLQ---PVLITGMEKG--------GQLTTTTEVENWPGDPNDLTGPLLMERMH 69 (320)
T ss_dssp CCEEEEEEEEECCSHHHHHHHHHHHTTTCC---CEEECCSSTT--------GGGGGCSBCCCSTTCCSSCBHHHHHHHHH
T ss_pred CCCCcCCEEEECcCHHHHHHHHHHHHCCCc---EEEEccCCCC--------ceEecchhhhhCCCCCCCCCHHHHHHHHH
Confidence 455679999999999999999999999887 9999975321 1111111112222221100 001112234
Q ss_pred hHHHHcCcEEEcCCeEEEEeCCCCEEE-cCCCcEEecCEEEEccCCCccccccccccccCccccccccCCcccccccccC
Q 012545 80 EWYKEKGIELILSTEIVRADIASKTLL-SATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTD 158 (461)
Q Consensus 80 ~~~~~~~v~~~~~~~v~~i~~~~~~v~-~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~ 158 (461)
.++++.+++++.+ .+..++.+.+.+. +.++.++.||+||+|||+.|.+|.+||...+
T Consensus 70 ~~~~~~~~~~~~~-~v~~i~~~~~~~~v~~~~~~~~~~~lv~AtG~~~~~~~~~g~~~~--------------------- 127 (320)
T 1trb_A 70 EHATKFETEIIFD-HINKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLGLPSEEAF--------------------- 127 (320)
T ss_dssp HHHHHTTCEEECC-CEEEEECSSSSEEEEESSCEEEEEEEEECCCEEECCCCCHHHHHT---------------------
T ss_pred HHHHHCCCEEEEe-eeeEEEecCCEEEEEeCCCEEEcCEEEECCCCCcCCCCCCChHHh---------------------
Confidence 4566789999998 4889987665544 5667789999999999999988777775320
Q ss_pred CCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHH
Q 012545 159 FGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFY 238 (461)
Q Consensus 159 ~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~ 238 (461)
....++.+...+.. + ..+++++|||+|++|+|+|..|.+.|.+|+++++.+.+. .++.+.+.+
T Consensus 128 ------~~~~~~~~~~~~~~------~--~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~~~~~~~l 190 (320)
T 1trb_A 128 ------KGRGVSACATSDGF------F--YRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR---AEKILIKRL 190 (320)
T ss_dssp ------BTTTEESCHHHHGG------G--GTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC---CCHHHHHHH
T ss_pred ------CCceeEecccCCcc------c--cCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc---cCHHHHHHH
Confidence 01223322222211 1 157899999999999999999999999999999988764 377888888
Q ss_pred HHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCC----C--cEEecCEEEEccCCCCChhhhhcccccCCCcEEeCCCC
Q 012545 239 EGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKD----G--RTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDFF 312 (461)
Q Consensus 239 ~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~----G--~~i~aD~vi~a~G~~p~~~~~~~~~~~~~g~i~vd~~~ 312 (461)
.+.+++.||+++++++++++..+ ++.+..|++.+ | +++++|.||+|+|++|+.++++.++..++|+|.||+++
T Consensus 191 ~~~l~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~~~~~l~~~~G~i~vd~~~ 269 (320)
T 1trb_A 191 MDKVENGNIILHTNRTLEEVTGD-QMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGI 269 (320)
T ss_dssp HHHHHTSSEEEECSCEEEEEEEC-SSSEEEEEEECCTTCCCCEEEECSEEEECSCEEESCGGGTTTSCEETTEECCCCSS
T ss_pred HHhcccCCeEEEcCceeEEEEcC-CCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCChHHhcccccccCceEEECCCc
Confidence 89999999999999999999873 44565677654 4 57999999999999999998875565568899999987
Q ss_pred -----CCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCC
Q 012545 313 -----KTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGG 362 (461)
Q Consensus 313 -----~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 362 (461)
+|+.|+|||+|||+..+. ..+..|..+|+.||.+|...+.+
T Consensus 270 ~~~~~~t~~~~vya~GD~~~~~~---------~~~~~A~~~g~~aa~~i~~~l~~ 315 (320)
T 1trb_A 270 HGNATQTSIPGVFAAGDVMDHIY---------RQAITSAGTGCMAALDAERYLDG 315 (320)
T ss_dssp SSCTTBCSSTTEEECGGGGCSSS---------CCHHHHHHHHHHHHHHHHHHHTC
T ss_pred ccccccCCCCCEEEcccccCCcc---------hhhhhhhccHHHHHHHHHHHHHh
Confidence 899999999999998752 46888999999999999876643
No 56
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=100.00 E-value=2.9e-38 Score=315.15 Aligned_cols=318 Identities=18% Similarity=0.179 Sum_probs=239.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
.++|||||||+||++||.+|++.+. +.+|+|||+++.+.| +++...+.... ..... .....+.+.+
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~-~~~Vtlie~~~~~~~--~p~~~~v~~g~--~~~~~---------~~~~~~~~~~ 67 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADP-SIEVTLIEPNETYYT--CYMSNEVIGGD--RELAS---------LRVGYDGLRA 67 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCT-TSEEEEECSCSSEEC--STTHHHHHHTS--SCGGG---------GEECSHHHHH
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCc-CCeEEEEeCCCCCCC--ccCHHHHhcCC--CCHHH---------HhhCHHHHHH
Confidence 4789999999999999999999874 567999999975432 22222222111 00000 1123455667
Q ss_pred cCcEEEcCCeEEEEeCCCCEEEcCCCcEEecCEEEEccCCCccccccccccccCccccccccCCcccccccccCCCCCCC
Q 012545 85 KGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVEGA 164 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~ 164 (461)
.+++++.+ +|+.+|++.+.+.+.+++++.||+||+|||+++.+|.+||+.+. .
T Consensus 68 ~gv~~i~~-~v~~id~~~~~v~~~~g~~i~yd~LviAtG~~~~~~~i~G~~e~--------------------------~ 120 (401)
T 3vrd_B 68 HGIQVVHD-SALGIDPDKKLVKTAGGAEFAYDRCVVAPGIDLLYDKIEGYSEA--------------------------L 120 (401)
T ss_dssp TTCEEECS-CEEEEETTTTEEEETTSCEEECSEEEECCCEEECGGGSBTCCSG--------------------------G
T ss_pred CCCEEEEe-EEEEEEccCcEEEecccceeecceeeeccCCccccCCccCchhh--------------------------c
Confidence 89999987 89999999999999999999999999999999988888887531 0
Q ss_pred CCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCH-----------HHHHHHHHHHHCC--CcEEEEccCCccCC-ccc
Q 012545 165 DAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGY-----------IGLELSAALKINN--IDVSMVYPEPWCMP-RLF 230 (461)
Q Consensus 165 ~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~-----------~g~e~a~~l~~~g--~~Vtli~~~~~~~~-~~~ 230 (461)
....++.+++.+++..+++.++.......+|++++. .+.+++..+++.+ .+|+++++.+.+.. ..+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~~~~~~~~ 200 (401)
T 3vrd_B 121 AAKLPHAWKAGEQTALLRRQLESMDDGGVVIIAPPAPPFRCPPGPYERASQIAHYLKAHKSKSKVIILDNSQTFSKQAQF 200 (401)
T ss_dssp GGTSCCCSSCSHHHHHHHHHHHHSCTTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHCTTCEEEEECSSSSCTTHHHH
T ss_pred ccCccceeccHHHHHHHHHHHHhcccCCcEEEecCCccEEeehHHHHHHHHHHHHHHhcCCCCEEEEEcccccccccccc
Confidence 112345567788888888888876555555554332 3456666666655 68999998887643 225
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChhhhhcccccCCCcEEeCC
Q 012545 231 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDD 310 (461)
Q Consensus 231 ~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~~~~~~~~~~~g~i~vd~ 310 (461)
++.+.+.+.+.+++.||+++++++++.++.+.+. ..+++++|+++++|.+++++|.+|+..+.+.++..++|+|.||+
T Consensus 201 ~~~~~~~~~~~l~~~gi~v~~~~~v~~v~~~~~~--~~v~~~~g~~i~~D~vi~~~g~~~~~~~~~~gl~~~~G~i~VD~ 278 (401)
T 3vrd_B 201 TKGWERLYGFGTENALIEWHPGPDAAVVKTDTEA--MTVETSFGETFKAAVINLIPPQRAGKIAQSASLTNDSGWCPVDI 278 (401)
T ss_dssp HHHHHHHSCTTSTTCSEEEECTTTTCEEEEETTT--TEEEETTSCEEECSEEEECCCEEECHHHHHTTCCCTTSSBCBCT
T ss_pred cHHHHHHHHHHHHhcCcEEEeCceEEEEEecccc--eEEEcCCCcEEEeeEEEEecCcCCchhHhhccccccCCCEEECC
Confidence 6777777788889999999999999999874444 46889999999999999999999986555667766889999998
Q ss_pred C-CC-CCCCCEEEeCccccc-CccccCcceeeccHHHHHHHHHHHHHHHhcccCCCcccCCCCCCe
Q 012545 311 F-FK-TSADDVYAVGDVATF-PMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPY 373 (461)
Q Consensus 311 ~-~~-t~~~~vya~GD~~~~-~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~ 373 (461)
+ || |++|||||+|||++. +.+ ++...|.+||+++|+||++.+.|+.+.++.+..+
T Consensus 279 ~tl~~t~~p~VfAiGDva~~~~~p--------k~a~~A~~qa~v~A~ni~~~l~G~~~~~~~y~~~ 336 (401)
T 3vrd_B 279 RTFESSLQPGIHVIGDACNAAPMP--------KSAYSANSQAKVAAAAVVALLKGEEPGTPSYLNT 336 (401)
T ss_dssp TTCBBSSSTTEEECGGGBCCTTSC--------BSHHHHHHHHHHHHHHHHHHHHTCCCCCCCEEEE
T ss_pred CcceecCCCCEEEecccccCCCCC--------chHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCe
Confidence 6 66 799999999999864 332 6788999999999999998776655444444433
No 57
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=3.3e-37 Score=298.67 Aligned_cols=294 Identities=19% Similarity=0.227 Sum_probs=213.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeec-CCCCCCCCHhHH
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCV-GSGGERLLPEWY 82 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 82 (461)
+.+||+|||||+||+++|..|++.|++ |+|+|++.... .+........++++.... .......+.+.+
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~gg--------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 75 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLS---TLILEKGMPGG--------QIAWSEEVENFPGFPEPIAGMELAQRMHQQA 75 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCTTG--------GGGGCSCBCCSTTCSSCBCHHHHHHHHHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCc---EEEEeCCCCCc--------ccccccccccCCCCCCCCCHHHHHHHHHHHH
Confidence 368999999999999999999999987 99999983211 111111111122221100 000112234556
Q ss_pred HHcCcEEEcCCeEEEEeCC--C---CEEEcCCCcEEecCEEEEccCCCccccccccccccCccccccccCCccccccccc
Q 012545 83 KEKGIELILSTEIVRADIA--S---KTLLSATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLT 157 (461)
Q Consensus 83 ~~~~v~~~~~~~v~~i~~~--~---~~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~ 157 (461)
++.+++++.+ ++..++.+ . ..+.+.+++++.||++|+|||+.|.+|.+||...
T Consensus 76 ~~~gv~~~~~-~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~i~g~~~--------------------- 133 (325)
T 2q7v_A 76 EKFGAKVEMD-EVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRKLGIPGEDN--------------------- 133 (325)
T ss_dssp HHTTCEEEEC-CEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEECCCCCTTTTT---------------------
T ss_pred HHcCCEEEee-eEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcCCCCCCChhh---------------------
Confidence 6789999884 89988875 3 3566777888999999999999997766666431
Q ss_pred CCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHH
Q 012545 158 DFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAF 237 (461)
Q Consensus 158 ~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~ 237 (461)
+. ...++.+...+.. ...+++++|+|+|++|+|+|..|.+.|.+|+++++.+.+.. ++.+.
T Consensus 134 ---~~---~~~~~~~~~~~~~--------~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~---~~~~~-- 194 (325)
T 2q7v_A 134 ---FW---GKGVSTCATCDGF--------FYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA---NKVAQ-- 194 (325)
T ss_dssp ---TB---TTTEESCHHHHGG--------GGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS---CHHHH--
T ss_pred ---cc---CceEEEeccCCHH--------HcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc---chHHH--
Confidence 00 1223322221111 11578999999999999999999999999999999887642 33332
Q ss_pred HHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeC---CCc--EEecCEEEEccCCCCChhhhhccccc-CCCcEEeCCC
Q 012545 238 YEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK---DGR--TLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDF 311 (461)
Q Consensus 238 ~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~---~G~--~i~aD~vi~a~G~~p~~~~~~~~~~~-~~g~i~vd~~ 311 (461)
.+.+++.||+++++++++++.. ++.+..|++. +|+ ++++|.||+|+|++|+.++++..+.. ++|+|.||++
T Consensus 195 -~~l~~~~gv~i~~~~~v~~i~~--~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i~vd~~ 271 (325)
T 2q7v_A 195 -ARAFANPKMKFIWDTAVEEIQG--ADSVSGVKLRNLKTGEVSELATDGVFIFIGHVPNTAFVKDTVSLRDDGYVDVRDE 271 (325)
T ss_dssp -HHHHTCTTEEEECSEEEEEEEE--SSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTTSCBCTTSCBCCBTT
T ss_pred -HHHHhcCCceEecCCceEEEcc--CCcEEEEEEEECCCCcEEEEEcCEEEEccCCCCChHHHhhhcccCCCccEecCCC
Confidence 2333446999999999999987 4555567765 675 79999999999999999888655544 5789999999
Q ss_pred CCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccC
Q 012545 312 FKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEG 361 (461)
Q Consensus 312 ~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~ 361 (461)
+||+.|+|||+|||+..+. +.+..|..||+.||.+|...+.
T Consensus 272 ~~t~~~~vya~GD~~~~~~---------~~~~~A~~~g~~aa~~i~~~l~ 312 (325)
T 2q7v_A 272 IYTNIPMLFAAGDVSDYIY---------RQLATSVGAGTRAAMMTERQLA 312 (325)
T ss_dssp TBCSSTTEEECSTTTCSSC---------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEeecccCccH---------HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998642 5788999999999999987653
No 58
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=2.2e-37 Score=297.79 Aligned_cols=292 Identities=19% Similarity=0.237 Sum_probs=213.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
.+||+|||||+||+++|..|++.|++ |+|+|+.....+ ........++.............+.+.+++
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~---v~li~~~~gG~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIR---TGLMGERFGGQI---------LDTVDIENYISVPKTEGQKLAGALKVHVDE 68 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCC---EEEECSSTTGGG---------GGCCEECCBTTBSSEEHHHHHHHHHHHHHT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCc---EEEEeCCCCcee---------ccccccccccCcCCCCHHHHHHHHHHHHHH
Confidence 37999999999999999999999887 999986421111 000000111111000000111233455667
Q ss_pred cCcEEEcCCeEEEEeCC-----CCEEEcCCCcEEecCEEEEccCCCccccccccccccCccccccccCCcccccccccCC
Q 012545 85 KGIELILSTEIVRADIA-----SKTLLSATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDF 159 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~-----~~~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~ 159 (461)
.+++++.++++..++.+ ...+.+.+++++.||++|+|||+.|..|.+||..++
T Consensus 69 ~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~~~~~g~~~~---------------------- 126 (310)
T 1fl2_A 69 YDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNVPGEDQY---------------------- 126 (310)
T ss_dssp SCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTTT----------------------
T ss_pred cCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcCCCCCCChhhc----------------------
Confidence 89999999899999865 345777788789999999999999976666665320
Q ss_pred CCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHH
Q 012545 160 GVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYE 239 (461)
Q Consensus 160 ~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~ 239 (461)
....++.+... .... ..+++++|+|+|++|+|+|..|++.+.+|+++++.+.+. +++ .+.
T Consensus 127 -----~~~~~~~~~~~------~~~~--~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~~----~~~ 186 (310)
T 1fl2_A 127 -----RTKGVTYCPHC------DGPL--FKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK---ADQ----VLQ 186 (310)
T ss_dssp -----BTTTEESCHHH------HGGG--GBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC---SCH----HHH
T ss_pred -----ccceeEEeccC------cHhh--cCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC---ccH----HHH
Confidence 11233322211 1111 257899999999999999999999999999999988763 343 344
Q ss_pred HHHHh-cCcEEEcCCcEEEEEecCCCCEEEEEeCC---Cc--EEecCEEEEccCCCCChhhhhccccc-CCCcEEeCCCC
Q 012545 240 GYYAN-KGIKIIKGTVAVGFTTNADGEVKEVKLKD---GR--TLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDFF 312 (461)
Q Consensus 240 ~~l~~-~GV~v~~~~~v~~i~~~~~g~~~~v~~~~---G~--~i~aD~vi~a~G~~p~~~~~~~~~~~-~~g~i~vd~~~ 312 (461)
+.+++ .||+++++++++++.. +++++..+++.+ |+ ++++|.||+|+|++|+.++++..+.. .+|+|.||+++
T Consensus 187 ~~l~~~~gv~v~~~~~v~~i~~-~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~l~~~~~g~i~vd~~~ 265 (310)
T 1fl2_A 187 DKLRSLKNVDIILNAQTTEVKG-DGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLEGAVERNRMGEIIIDAKC 265 (310)
T ss_dssp HHHHTCTTEEEESSEEEEEEEE-SSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTTSCBCTTSCBCCCTTC
T ss_pred HHHhhCCCeEEecCCceEEEEc-CCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCccCchHHhccccccCCCcEEcCCCC
Confidence 56666 6999999999999987 345655666653 53 68999999999999999888655554 57899999999
Q ss_pred CCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhccc
Q 012545 313 KTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATE 360 (461)
Q Consensus 313 ~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 360 (461)
||+.|+|||+|||+..+. +.+..|..||+.||.+|...+
T Consensus 266 ~t~~~~vya~GD~~~~~~---------~~~~~A~~~g~~aa~~i~~~l 304 (310)
T 1fl2_A 266 ETNVKGVFAAGDCTTVPY---------KQIIIATGEGAKASLSAFDYL 304 (310)
T ss_dssp BCSSTTEEECSTTBSCSS---------CCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEeecccCCcc---------hhhhhhHhhHHHHHHHHHHHH
Confidence 999999999999998753 467889999999999998755
No 59
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=3.6e-37 Score=297.65 Aligned_cols=295 Identities=22% Similarity=0.237 Sum_probs=212.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhH
Q 012545 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEW 81 (461)
Q Consensus 2 m~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (461)
|+..+||+|||||+||+++|..|++.|++ |+|+|+..... .+........++++...........+.+.
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~gg--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARSGFS---VAILDKAVAGG--------LTAEAPLVENYLGFKSIVGSELAKLFADH 81 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSTTG--------GGGGCSCBCCBTTBSSBCHHHHHHHHHHH
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhCCCc---EEEEeCCCCCc--------cccccchhhhcCCCcccCHHHHHHHHHHH
Confidence 33468999999999999999999999987 99999963211 01111111122222000000011223445
Q ss_pred HHHcCcEEEcCCeEEEEeCCCC--EEEcCCCcEEecCEEEEccCCCccccccccccccCccccccccCCcccccccccCC
Q 012545 82 YKEKGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDF 159 (461)
Q Consensus 82 ~~~~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~ 159 (461)
+++.+++++. .++..++.+.+ .+.+ ++.++.||++|+|+|+.+.+|.+||...
T Consensus 82 ~~~~~v~~~~-~~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~~~~i~g~~~----------------------- 136 (319)
T 3cty_A 82 AANYAKIREG-VEVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTHKHLGVKGESE----------------------- 136 (319)
T ss_dssp HHTTSEEEET-CCEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEECCCCCBTTTT-----------------------
T ss_pred HHHcCCEEEE-eeEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCcccCCCCChHH-----------------------
Confidence 5668999988 58999887665 4555 5567999999999999987666665421
Q ss_pred CCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHH
Q 012545 160 GVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYE 239 (461)
Q Consensus 160 ~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~ 239 (461)
+ ....++.....+.. . ..+++++|+|+|++|+|+|..|.+.+.+|+++++.+.+.. ++. +.
T Consensus 137 -~---~~~~~~~~~~~~~~------~--~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~---~~~----l~ 197 (319)
T 3cty_A 137 -Y---FGKGTSYCSTCDGY------L--FKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC---ENA----YV 197 (319)
T ss_dssp -T---BTTTEESCHHHHGG------G--GBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS---CHH----HH
T ss_pred -h---CCceEEEEEecchh------h--cCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC---CHH----HH
Confidence 0 01223322222111 1 1478999999999999999999999999999999887642 333 44
Q ss_pred HHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeC---CCc--EEecCEEEEccCCCCChhhhhc-cccc-CCCcEEeCCCC
Q 012545 240 GYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK---DGR--TLEADIVVVGVGGRPLISLFKG-QVAE-NKGGIETDDFF 312 (461)
Q Consensus 240 ~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~---~G~--~i~aD~vi~a~G~~p~~~~~~~-~~~~-~~g~i~vd~~~ 312 (461)
+.+++.||+++++++++++.. +++++..+.+. +|+ ++++|.||+|+|++|+.++++. ++.. ++|+|.||+++
T Consensus 198 ~~l~~~gv~i~~~~~v~~i~~-~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~~g~i~vd~~~ 276 (319)
T 3cty_A 198 QEIKKRNIPYIMNAQVTEIVG-DGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKDSGVKLDERGYIVVDSRQ 276 (319)
T ss_dssp HHHHHTTCCEECSEEEEEEEE-SSSSEEEEEEEETTTCCEEEECCSEEEECCCEEECCGGGTTSCCCBCTTSCBCCCTTC
T ss_pred HHHhcCCcEEEcCCeEEEEec-CCceEEEEEEEEcCCCceEEEecCEEEEeeCCccChHHHhhccccccCCccEeCCCCC
Confidence 556688999999999999987 34445566664 675 6999999999999999988754 3555 57899999999
Q ss_pred CCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccC
Q 012545 313 KTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEG 361 (461)
Q Consensus 313 ~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~ 361 (461)
||+.|+|||+|||+..+. ..+..|..||+.||.+|...+.
T Consensus 277 ~t~~~~vya~GD~~~~~~---------~~~~~A~~~g~~aa~~i~~~l~ 316 (319)
T 3cty_A 277 RTSVPGVYAAGDVTSGNF---------AQIASAVGDGCKAALSLYSDSI 316 (319)
T ss_dssp BCSSTTEEECSTTBTTCC---------CCHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCEEEeecccCcch---------hhHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999998642 5688999999999999987654
No 60
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=3.2e-37 Score=303.13 Aligned_cols=305 Identities=21% Similarity=0.289 Sum_probs=220.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCC-CCCCCCCceeecCCCCCCCCHh
Q 012545 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPE-GTARLPGFHVCVGSGGERLLPE 80 (461)
Q Consensus 2 m~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 80 (461)
|++.+||+|||||++|+++|..|++.|++ |+|||+++..... + ..+.+. .....+.+...........+.+
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~~gg~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 82 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGMNNIS---CRIIESMPQLGGQ-L----AALYPEKHIYDVAGFPEVPAIDLVESLWA 82 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCHH-H----HHTCTTSEECCSTTCSSEEHHHHHHHHHH
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCC---EEEEecCCCCCCc-c----cccCCCcccccCCCCCCCCHHHHHHHHHH
Confidence 34568999999999999999999999887 9999998653210 0 000000 0011111110000011112334
Q ss_pred HHHHcCcEEEcCCeEEEEeCCCC---EEEcCCCcEEecCEEEEccCCC---cccccccc-ccccCccccccccCCccccc
Q 012545 81 WYKEKGIELILSTEIVRADIASK---TLLSATGLIFKYQILVIATGST---VSITSLTS-IRSKHCLCCFFLRTLPLFQV 153 (461)
Q Consensus 81 ~~~~~~v~~~~~~~v~~i~~~~~---~v~~~~~~~~~~d~liiAtG~~---~~~~~~~g-~~~~~~~~~~~~~~~p~~~~ 153 (461)
.+++.+++++.+++|..++...+ .|.+.+++++.||+||+|||+. |..|.+|| +.+
T Consensus 83 ~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~~~~i~g~~~~----------------- 145 (360)
T 3ab1_A 83 QAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPRKLPQLGNIDH----------------- 145 (360)
T ss_dssp HHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCSCCBCCCGGGCCCTT-----------------
T ss_pred HHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCcCCCCCCCCCCchhh-----------------
Confidence 45567899999989999987643 5777788789999999999994 44444444 321
Q ss_pred ccccCCCCCCCCCCCEEE-eCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCH
Q 012545 154 LRLTDFGVEGADAKNIFY-LREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTA 232 (461)
Q Consensus 154 ~~~~~~~~~g~~~~~v~~-~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~ 232 (461)
+. ...+++ +++.. ...+++++|||+|++|+|+|..|.+.+.+|+++++.+.+.+. +
T Consensus 146 -------~~---~~~v~~~~~~~~----------~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~---~ 202 (360)
T 3ab1_A 146 -------LT---GSSVYYAVKSVE----------DFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGH---G 202 (360)
T ss_dssp -------TB---TTTEESSCSCGG----------GGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSC---S
T ss_pred -------Cc---CceEEEecCCHH----------HcCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCC---H
Confidence 01 112321 12221 114789999999999999999999999999999998877652 4
Q ss_pred HHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeC--CC--cEEecCEEEEccCCCCChhhhhc-ccccCCCcEE
Q 012545 233 DIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK--DG--RTLEADIVVVGVGGRPLISLFKG-QVAENKGGIE 307 (461)
Q Consensus 233 ~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~--~G--~~i~aD~vi~a~G~~p~~~~~~~-~~~~~~g~i~ 307 (461)
+..+.+.+.+++.||+++++++++++.. +++.+..|++. +| +++++|.||+|+|++|+.++++. ++..++|+|.
T Consensus 203 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~-~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i~ 281 (360)
T 3ab1_A 203 KTAHEVERARANGTIDVYLETEVASIEE-SNGVLTRVHLRSSDGSKWTVEADRLLILIGFKSNLGPLARWDLELYENALV 281 (360)
T ss_dssp HHHHSSHHHHHHTSEEEESSEEEEEEEE-ETTEEEEEEEEETTCCEEEEECSEEEECCCBCCSCGGGGGSSCCEETTEEE
T ss_pred HHHHHHHHHhhcCceEEEcCcCHHHhcc-CCCceEEEEEEecCCCeEEEeCCEEEECCCCCCCHHHHHhhccccccCeee
Confidence 5677788888999999999999999987 34555566664 77 57999999999999999987754 4555679999
Q ss_pred eCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCC
Q 012545 308 TDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGG 362 (461)
Q Consensus 308 vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 362 (461)
||+++||+.|+|||+|||+..+.. .+.+..|..||+.||.+|.+...+
T Consensus 282 vd~~~~t~~~~vya~GD~~~~~~~-------~~~~~~A~~~g~~aa~~i~~~l~~ 329 (360)
T 3ab1_A 282 VDSHMKTSVDGLYAAGDIAYYPGK-------LKIIQTGLSEATMAVRHSLSYIKP 329 (360)
T ss_dssp CCTTSBCSSTTEEECSTTEECTTC-------CCSHHHHHHHHHHHHHHHHHHHSC
T ss_pred ecCCCcCCCCCEEEecCccCCCCc-------cceeehhHHHHHHHHHHHHhhcCC
Confidence 999999999999999999986531 167889999999999999876643
No 61
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=9.2e-38 Score=303.85 Aligned_cols=301 Identities=21% Similarity=0.192 Sum_probs=219.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeec-CCCCCCCCHhHH
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCV-GSGGERLLPEWY 82 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 82 (461)
+++||+|||||++|+++|..|++.|++ |+|+|+.+... ..+...+........++.+.... .......+...+
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~---v~vie~~~~~~---~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIK---PILYEGMMANG---IAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQS 94 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCC---CEEECCSSBTT---BCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCC---EEEEecCCCCC---CCcCcccccchhhcccCCCcccCCHHHHHHHHHHHH
Confidence 468999999999999999999999987 99999975211 11112222211122222221100 011122345566
Q ss_pred HHcCcEEEcCCeEEEEeCCCCEEEc-----CCCcEEecCEEEEccCCCccccccccccccCccccccccCCccccccccc
Q 012545 83 KEKGIELILSTEIVRADIASKTLLS-----ATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLT 157 (461)
Q Consensus 83 ~~~~v~~~~~~~v~~i~~~~~~v~~-----~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~ 157 (461)
++.+++++.++ +..++.+.+.+.+ .++.++.||++|+|||+.+..|.+||...+
T Consensus 95 ~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~~~~~g~~~~-------------------- 153 (338)
T 3itj_A 95 TKFGTEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKRMHLPGEETY-------------------- 153 (338)
T ss_dssp HHTTCEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEECCCCCTTHHHH--------------------
T ss_pred HHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcCCCCCCCchhc--------------------
Confidence 77899999986 9999988776544 466779999999999999987777775420
Q ss_pred CCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHH
Q 012545 158 DFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAF 237 (461)
Q Consensus 158 ~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~ 237 (461)
....++...... ..+....+++++|||+|++|+|+|..|.+.|.+|+++++.+.+.+ .+.
T Consensus 154 -------~~~~~~~~~~~~------~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~-------~~~ 213 (338)
T 3itj_A 154 -------WQKGISACAVCD------GAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA-------STI 213 (338)
T ss_dssp -------BTTTEESCHHHH------TTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS-------CHH
T ss_pred -------cCccEEEchhcc------cchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC-------CHH
Confidence 011222221111 111112578999999999999999999999999999999888764 233
Q ss_pred HHHHHHhc-CcEEEcCCcEEEEEecCCCCEEEEEeCC-----CcEEecCEEEEccCCCCChhhhhccccc-CCCcEEe-C
Q 012545 238 YEGYYANK-GIKIIKGTVAVGFTTNADGEVKEVKLKD-----GRTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIET-D 309 (461)
Q Consensus 238 ~~~~l~~~-GV~v~~~~~v~~i~~~~~g~~~~v~~~~-----G~~i~aD~vi~a~G~~p~~~~~~~~~~~-~~g~i~v-d 309 (461)
+.+.+.+. ||++++++++++++. +++.+..|++.+ ++++++|.||+|+|++|+.++++.++.. ++|+|.| |
T Consensus 214 ~~~~l~~~~gv~i~~~~~v~~i~~-~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~~l~~~~~G~i~v~~ 292 (338)
T 3itj_A 214 MQKRAEKNEKIEILYNTVALEAKG-DGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAGQVDTDEAGYIKTVP 292 (338)
T ss_dssp HHHHHHHCTTEEEECSEEEEEEEE-SSSSEEEEEEEETTTTEEEEEECSEEEECSCEEECCGGGBTTBCBCTTSCBCCCT
T ss_pred HHHHHHhcCCeEEeecceeEEEEc-ccCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCChhHhhCceEecCCCcEEEcC
Confidence 44555554 999999999999987 345566677765 4689999999999999999988777766 5788885 8
Q ss_pred CCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccC
Q 012545 310 DFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEG 361 (461)
Q Consensus 310 ~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~ 361 (461)
++++|+.|+|||+|||+..+. +.+..|..+|+.||.+|...+.
T Consensus 293 ~~~~t~~~~vya~GD~~~~~~---------~~~~~A~~~g~~aa~~i~~~l~ 335 (338)
T 3itj_A 293 GSSLTSVPGFFAAGDVQDSKY---------RQAITSAGSGCMAALDAEKYLT 335 (338)
T ss_dssp TSSBCSSTTEEECGGGGCSSC---------CCHHHHHHHHHHHHHHHHHHHT
T ss_pred cccccCCCCEEEeeccCCCCc---------cceeeehhhhHHHHHHHHHHHh
Confidence 899999999999999998532 5788999999999999987654
No 62
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=4.4e-37 Score=295.83 Aligned_cols=291 Identities=19% Similarity=0.181 Sum_probs=212.0
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCC-CCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecC-CCCCCCCHhHHH
Q 012545 6 FKYVILGGGVSAGYAAREFAKQGV-KPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVG-SGGERLLPEWYK 83 (461)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~L~~~g~-~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 83 (461)
+||+|||||++|+++|..|++.|+ + |+|+|++.... .+........++.+..... ......+.+.++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~---v~lie~~~~gg--------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 70 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKN---AVLFEKGMPGG--------QITGSSEIENYPGVKEVVSGLDFMQPWQEQCF 70 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSS---EEEECSSSTTC--------GGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHH
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCc---EEEEcCCCCCc--------ccccccccccCCCCcccCCHHHHHHHHHHHHH
Confidence 699999999999999999999988 6 99999964211 0111111111222211000 001112344556
Q ss_pred HcCcEEEcCCeEEEEeCCCC--EEEcCCCcEEecCEEEEccCCCccccccccccccCccccccccCCcccccccccCCCC
Q 012545 84 EKGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGV 161 (461)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 161 (461)
+.+++++. .++..++.+.+ .+.+.+++++.||++|+|||+.|.+|++||..+ +
T Consensus 71 ~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~~~g~~~------------------------~ 125 (311)
T 2q0l_A 71 RFGLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKRTGIKGESE------------------------Y 125 (311)
T ss_dssp TTSCEEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEECCCCCBTHHH------------------------H
T ss_pred HcCCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCCCCCCCChhh------------------------c
Confidence 67999988 58999987666 566677888999999999999997777777532 0
Q ss_pred CCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHHH
Q 012545 162 EGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGY 241 (461)
Q Consensus 162 ~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~ 241 (461)
. ...++++...+.. + ..+++++|+|+|++|+|+|..|.+.|.+|+++++.+.+. .++.+ .+.
T Consensus 126 ~---~~~~~~~~~~~~~------~--~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~~~~----~~~ 187 (311)
T 2q0l_A 126 W---GKGVSTCATCDGF------F--YKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR---CAPIT----LEH 187 (311)
T ss_dssp B---TTTEESCHHHHGG------G--GTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC---SCHHH----HHH
T ss_pred c---CCcEEEeecCChh------h--cCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC---CCHHH----HHH
Confidence 0 1223332222211 1 157899999999999999999999999999999988763 34443 334
Q ss_pred HH-hcCcEEEcCCcEEEEEecCCCCEEEEEeC---CCc--EEecCEEEEccCCCCChhhhhcc-----ccc-CCCcEEeC
Q 012545 242 YA-NKGIKIIKGTVAVGFTTNADGEVKEVKLK---DGR--TLEADIVVVGVGGRPLISLFKGQ-----VAE-NKGGIETD 309 (461)
Q Consensus 242 l~-~~GV~v~~~~~v~~i~~~~~g~~~~v~~~---~G~--~i~aD~vi~a~G~~p~~~~~~~~-----~~~-~~g~i~vd 309 (461)
+. +.||+++++++++++..+ ++.+..+++. +|+ ++++|.||+|+|++|++++++.. +.. ++|+|.||
T Consensus 188 l~~~~gv~v~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~l~~~~~g~i~vd 266 (311)
T 2q0l_A 188 AKNNDKIEFLTPYVVEEIKGD-ASGVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNAVLKQEDNSMLCKCDEYGSIVVD 266 (311)
T ss_dssp HHTCTTEEEETTEEEEEEEEE-TTEEEEEEEEETTTCCEEEEECSEEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCC
T ss_pred HhhCCCeEEEeCCEEEEEECC-CCcEeEEEEEecCCCceEEEecCEEEEEecCccChhhhhcccccceeEeccCCCEEeC
Confidence 44 479999999999999873 3444456665 675 79999999999999999888643 554 57899999
Q ss_pred CCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhccc
Q 012545 310 DFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATE 360 (461)
Q Consensus 310 ~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 360 (461)
+++||+.|+|||+|||+..+. +.+..|..||+.||.||...+
T Consensus 267 ~~~~t~~~~vya~GD~~~~~~---------~~~~~A~~~g~~aa~~i~~~l 308 (311)
T 2q0l_A 267 FSMKTNVQGLFAAGDIRIFAP---------KQVVCAASDGATAALSVISYL 308 (311)
T ss_dssp TTCBCSSTTEEECSTTBTTCC---------CCHHHHHHHHHHHHHHHHHHH
T ss_pred CccccCCCCeEEcccccCcch---------HHHHHHHHhHHHHHHHHHHHH
Confidence 999999999999999998632 578899999999999997643
No 63
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=6e-37 Score=295.07 Aligned_cols=292 Identities=18% Similarity=0.145 Sum_probs=212.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEE-EeCCCCCCCCCCcccccccCCCCCCCCCCceeec-CCCCCCCCHhH
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAI-ISKEAVAPYERPALSKAYLFPEGTARLPGFHVCV-GSGGERLLPEW 81 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~v-ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 81 (461)
+++||+|||||+||++||..|++.|++ |+| +|++... ..+........+|.+.... .......+...
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~---v~li~e~~~~g--------G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLK---NVVMFEKGMPG--------GQITSSSEIENYPGVAQVMDGISFMAPWSEQ 71 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCS---CEEEECSSSTT--------GGGGGCSCBCCSTTCCSCBCHHHHHHHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCC---eEEEEeCCCCC--------ceeeeeceeccCCCCCCCCCHHHHHHHHHHH
Confidence 468999999999999999999999987 899 9995321 1111111112223222000 00111233455
Q ss_pred HHHcCcEEEcCCeEEEEeCCC--CEEE--c-CCCcEEecCEEEEccCCCccccccccccccCccccccccCCcccccccc
Q 012545 82 YKEKGIELILSTEIVRADIAS--KTLL--S-ATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRL 156 (461)
Q Consensus 82 ~~~~~v~~~~~~~v~~i~~~~--~~v~--~-~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~ 156 (461)
+++.+++++.+ ++..+ .+. +.+. + .++ ++.||++|+|||+.|..|.+||+..
T Consensus 72 ~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~~~~~~~~g~~~-------------------- 128 (315)
T 3r9u_A 72 CMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGGK-TELAKAVIVCTGSAPKKAGFKGEDE-------------------- 128 (315)
T ss_dssp HTTTCCEEECC-CEEEE-EECTTSCEEEEETTSC-EEEEEEEEECCCEEECCCCCBTTTT--------------------
T ss_pred HHHcCcEEEEE-EEEEE-ecCCCCcEEEEEecCC-EEEeCEEEEeeCCCCCCCCCCChhh--------------------
Confidence 56689999998 88888 444 3333 3 334 8999999999999997777777532
Q ss_pred cCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHH
Q 012545 157 TDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAA 236 (461)
Q Consensus 157 ~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~ 236 (461)
+ ....++........ ...+++++|+|+|++++|+|..|.+.+.+|+++++.+.+.. +++
T Consensus 129 ----~---~~~~~~~~~~~~~~--------~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~---~~~--- 187 (315)
T 3r9u_A 129 ----F---FGKGVSTCATCDGF--------FYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRA---APS--- 187 (315)
T ss_dssp ----T---BTTTEESCHHHHGG--------GGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBS---CHH---
T ss_pred ----c---CCCeEEeeeccccc--------ccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCC---CHH---
Confidence 0 01223322211111 11578999999999999999999999999999999887632 443
Q ss_pred HHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeC--CCc--EEecCEEEEccCCCCChhhhhc-----cccc-CCCcE
Q 012545 237 FYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK--DGR--TLEADIVVVGVGGRPLISLFKG-----QVAE-NKGGI 306 (461)
Q Consensus 237 ~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~--~G~--~i~aD~vi~a~G~~p~~~~~~~-----~~~~-~~g~i 306 (461)
.+.+.+++.||+++++++++++.. +++.+..+++. +|+ ++++|.||+|+|++|+.++++. ++.. ++|+|
T Consensus 188 ~~~~~~~~~gv~~~~~~~v~~i~~-~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g~i 266 (315)
T 3r9u_A 188 TVEKVKKNEKIELITSASVDEVYG-DKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQV 266 (315)
T ss_dssp HHHHHHHCTTEEEECSCEEEEEEE-ETTEEEEEEEECTTSCEEEECCSCEEECSCEEECCGGGBCTTSCBSSCBCTTSCB
T ss_pred HHHHHHhcCCeEEEeCcEEEEEEc-CCCcEEEEEEEcCCCCeEEeecCeEEEEEcCCCCchhhhcccccceeeecCCCcE
Confidence 344556789999999999999987 34455566665 785 7999999999999999998876 4665 56999
Q ss_pred EeCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhccc
Q 012545 307 ETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATE 360 (461)
Q Consensus 307 ~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 360 (461)
.||+++||+.|+|||+|||+..+. +.+..|..||+.||.+|....
T Consensus 267 ~vd~~~~t~~~~v~a~GD~~~~~~---------~~~~~A~~~g~~aa~~i~~~l 311 (315)
T 3r9u_A 267 SVDLKMQTSVAGLFAAGDLRKDAP---------KQVICAAGDGAVAALSAMAYI 311 (315)
T ss_dssp CCCTTCBCSSTTEEECGGGBTTCC---------CCHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCcccCCCCEEEeecccCCch---------hhhhhHHhhHHHHHHHHHHHH
Confidence 999999999999999999996432 578899999999999998654
No 64
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=1.8e-37 Score=300.94 Aligned_cols=297 Identities=19% Similarity=0.241 Sum_probs=217.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCC-CCCCCCCceeecCCCCCCCCHhHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPE-GTARLPGFHVCVGSGGERLLPEWYK 83 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (461)
.+||+|||||+||++||..|++.|++ |+|+|+++..... . ....+. ....++.+...........+.+.++
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~~gG~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQAS---VKIIESLPQLGGQ---L--SALYPEKYIYDVAGFPKIRAQELINNLKEQMA 78 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCHH---H--HHHCTTSEECCSTTCSSEEHHHHHHHHHHHHT
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCC---EEEEEcCCCCCce---e--hhcCCCceEeccCCCCCCCHHHHHHHHHHHHH
Confidence 58999999999999999999999887 9999998753200 0 000000 0112222211111111123445556
Q ss_pred HcCcEEEcCCeEEEEeCCCC---EEEcCCCcEEecCEEEEccCC---CccccccccccccCccccccccCCccccccccc
Q 012545 84 EKGIELILSTEIVRADIASK---TLLSATGLIFKYQILVIATGS---TVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLT 157 (461)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~---~v~~~~~~~~~~d~liiAtG~---~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~ 157 (461)
+.+++++.+++|..++...+ .+.+.+++ +.||+||+|||+ .|..|.+||...+
T Consensus 79 ~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~~~p~~~~~~g~~~~-------------------- 137 (332)
T 3lzw_A 79 KFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGAFKPRKLELENAEQY-------------------- 137 (332)
T ss_dssp TSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSCCEECCCCCTTGGGG--------------------
T ss_pred HhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCcCCCCCCCCCChhhc--------------------
Confidence 67999999999999998766 67777776 999999999999 7877777775420
Q ss_pred CCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHH
Q 012545 158 DFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAF 237 (461)
Q Consensus 158 ~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~ 237 (461)
++ ..++. .+.+...+ ++++++|+|+|.+|+|+|..|.+.+.+|+++++.+.+.+ .+..
T Consensus 138 ----~g---~~~~~--~~~~~~~~-------~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~--~~~~---- 195 (332)
T 3lzw_A 138 ----EG---KNLHY--FVDDLQKF-------AGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA--HEHS---- 195 (332)
T ss_dssp ----BT---TTEES--SCSCGGGG-------BTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS--CHHH----
T ss_pred ----cC---ceEEE--ecCCHHHc-------CCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc--cHHH----
Confidence 11 11211 11111111 478999999999999999999999999999999988754 2322
Q ss_pred HHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCC-----CcEEecCEEEEccCCCCChhhhhc-ccccCCCcEEeCCC
Q 012545 238 YEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKD-----GRTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETDDF 311 (461)
Q Consensus 238 ~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~-----G~~i~aD~vi~a~G~~p~~~~~~~-~~~~~~g~i~vd~~ 311 (461)
.+.|++.||+++++++++++..+++ ...+++.+ ++++++|.||+|+|++|+.++++. ++..++|+|.||++
T Consensus 196 -~~~l~~~gv~~~~~~~v~~i~~~~~--~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~~~~g~i~vd~~ 272 (332)
T 3lzw_A 196 -VENLHASKVNVLTPFVPAELIGEDK--IEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGPIKNWGLDIEKNSIVVKST 272 (332)
T ss_dssp -HHHHHHSSCEEETTEEEEEEECSSS--CCEEEEEETTSCCEEEEECSEEEECCCEECCCGGGGGSSCCEETTEEECCTT
T ss_pred -HHHHhcCCeEEEeCceeeEEecCCc--eEEEEEEecCCCceEEEECCEEEEeeccCCCchHHhhcCccccCCeEEeCCC
Confidence 3457889999999999999987322 34566655 457999999999999999987754 45557899999999
Q ss_pred CCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCC
Q 012545 312 FKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGG 362 (461)
Q Consensus 312 ~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 362 (461)
+||+.|+|||+|||+..+.. .+.+..|..||+.||.+|.....+
T Consensus 273 ~~t~~~~vya~GD~~~~~~~-------~~~~~~A~~~g~~aa~~i~~~l~~ 316 (332)
T 3lzw_A 273 METNIEGFFAAGDICTYEGK-------VNLIASGFGEAPTAVNNAKAYMDP 316 (332)
T ss_dssp SBCSSTTEEECGGGEECTTC-------CCCHHHHHHHHHHHHHHHHHHHCT
T ss_pred CceecCCEEEccceecCCCC-------cceEeeehhhHHHHHHHHHHhhCh
Confidence 99999999999999965421 167889999999999999876644
No 65
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=1.1e-36 Score=294.12 Aligned_cols=293 Identities=18% Similarity=0.207 Sum_probs=214.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
++||+|||||+||+++|..|++.|++ |+|+|++ ... .+........++.+...........+.+.+++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~-~gg--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLK---TLVIGET-PGG--------QLTEAGIVDDYLGLIEIQASDMIKVFNKHIEK 82 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESS-TTG--------GGGGCCEECCSTTSTTEEHHHHHHHHHHHHHT
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCc---EEEEecc-CCC--------eecccccccccCCCCCCCHHHHHHHHHHHHHH
Confidence 57999999999999999999999987 9999998 211 11111111122222111111111234455667
Q ss_pred cCcEEEcCCeEEEEeCCCC--EEEcCCCcEEecCEEEEccCCCccccccccccccCccccccccCCcccccccccCCCCC
Q 012545 85 KGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVE 162 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 162 (461)
.+++++. ++|..++.+.+ .+.+.++.++.||+||+|||+.|..|.+||...
T Consensus 83 ~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~i~g~~~-------------------------- 135 (323)
T 3f8d_A 83 YEVPVLL-DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQE-------------------------- 135 (323)
T ss_dssp TTCCEEE-SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEECCCCCTTTTT--------------------------
T ss_pred cCCEEEE-EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCCccCCCCchhh--------------------------
Confidence 8999999 79999987654 467777788999999999999997766666432
Q ss_pred CCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHHHH
Q 012545 163 GADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYY 242 (461)
Q Consensus 163 g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l 242 (461)
.....++.. ...+. ....+++++|+|+|++++|+|..|.+.+.+|+++++.+.+++ +++ .+.+.+
T Consensus 136 -~~~~~~~~~-~~~~~-------~~~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~---~~~---~~~~~~ 200 (323)
T 3f8d_A 136 -FAGRGISYC-SVADA-------PLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA---QPI---YVETVK 200 (323)
T ss_dssp -TBTTTEESC-HHHHG-------GGGTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS---CHH---HHHHHH
T ss_pred -hcCCceEEe-ccCCH-------hHcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc---CHH---HHHHHH
Confidence 001233321 11111 112578999999999999999999999999999999988765 332 233444
Q ss_pred HhcCcEEEcCCcEEEEEecCCCCEEEEEeCC---Cc--EEecCEEEEccCCCCChhhhhc-cccc-CCCcEEeCCCCCCC
Q 012545 243 ANKGIKIIKGTVAVGFTTNADGEVKEVKLKD---GR--TLEADIVVVGVGGRPLISLFKG-QVAE-NKGGIETDDFFKTS 315 (461)
Q Consensus 243 ~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~---G~--~i~aD~vi~a~G~~p~~~~~~~-~~~~-~~g~i~vd~~~~t~ 315 (461)
++.||+++++++++++.. ++.+..+++.+ |+ ++++|.||+|+|++|+.++++. ++.. ++|+|.||+++||+
T Consensus 201 ~~~gv~~~~~~~v~~i~~--~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~g~~~~~~g~i~vd~~~~t~ 278 (323)
T 3f8d_A 201 KKPNVEFVLNSVVKEIKG--DKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTS 278 (323)
T ss_dssp TCTTEEEECSEEEEEEEE--SSSEEEEEEEETTTCCEEEEECSEEEECCCEECCHHHHHHTTCCBCTTSSBCCCTTCBCS
T ss_pred hCCCcEEEeCCEEEEEec--cCceeEEEEEECCCCceEEEEcCEEEEEECCCCChhHHhhcCeeecCCCcEecCCCceec
Confidence 456999999999999987 45566677765 76 7999999999999999887754 4665 67999999999999
Q ss_pred CCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhccc
Q 012545 316 ADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATE 360 (461)
Q Consensus 316 ~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 360 (461)
.|+|||+|||+..+. ..+.+..|..||+.||.+|....
T Consensus 279 ~~~vya~GD~~~~~~-------~~~~~~~A~~~g~~aa~~i~~~l 316 (323)
T 3f8d_A 279 VPGVFAAGDCTSAWL-------GFRQVITAVAQGAVAATSAYRYV 316 (323)
T ss_dssp STTEEECSTTBSTTT-------TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEcceecCCCC-------cccceeehhhHHHHHHHHHHHHH
Confidence 999999999998630 11678999999999999998654
No 66
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=100.00 E-value=5.4e-37 Score=308.32 Aligned_cols=310 Identities=16% Similarity=0.154 Sum_probs=221.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
.++|||||||+||++||..|++.+ ++.+|+|||+++++.|. |.+.. +.... ..... ......+++++
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~-~~~~VtlI~~~~~~~~~-p~l~~-v~~g~--~~~~~--------i~~~~~~~~~~ 68 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLM-PDLKITLISDRPYFGFT-PAFPH-LAMGW--RKFED--------ISVPLAPLLPK 68 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHC-TTCEEEEECSSSEEECG-GGHHH-HHHTC--SCGGG--------SEEESTTTGGG
T ss_pred CCcEEEECCCHHHHHHHHHHhccC-cCCeEEEEcCCCCCccC-ccHHH-HhcCC--CCHHH--------hhhcHHHHHHH
Confidence 358999999999999999999987 35679999999876663 33221 11100 00000 01234556777
Q ss_pred cCcEEEcCCeEEEEeCCCCEEEcCCCcEEecCEEEEccCCCccccccccccccCccccccccCCcccccccccCCCCCCC
Q 012545 85 KGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVEGA 164 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~ 164 (461)
.+++++.+ +|+.||++.++|.+.+|+++.||+||||||+++. +.+||+.
T Consensus 69 ~gv~~i~~-~v~~Id~~~~~V~~~~g~~i~YD~LViAtG~~~~-~~i~G~~----------------------------- 117 (430)
T 3hyw_A 69 FNIEFINE-KAESIDPDANTVTTQSGKKIEYDYLVIATGPKLV-FGAEGQE----------------------------- 117 (430)
T ss_dssp GTEEEECS-CEEEEETTTTEEEETTCCEEECSEEEECCCCEEE-CCSBTHH-----------------------------
T ss_pred CCcEEEEe-EEEEEECCCCEEEECCCCEEECCEEEEeCCCCcc-CCccCcc-----------------------------
Confidence 89999987 8999999999999999999999999999999863 3345542
Q ss_pred CCCCEEEeCCHHHHHHHHHHHHhc-CCCcEEEECCCH------HHHHHH----HHHHHCC----CcEEEEccCCccCC--
Q 012545 165 DAKNIFYLREIDDADKLVEAIKAK-KNGKAVVVGGGY------IGLELS----AALKINN----IDVSMVYPEPWCMP-- 227 (461)
Q Consensus 165 ~~~~v~~~~~~~~~~~l~~~l~~~-~~~~v~VvG~G~------~g~e~a----~~l~~~g----~~Vtli~~~~~~~~-- 227 (461)
++.+.+++.+++.++++.+++. ..+.++|+|++. .+.|++ ..+.+.+ .+|++++..+.+..
T Consensus 118 --e~~~~~~~~~~a~~~~~~l~~~~~~~~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~~l~~~~ 195 (430)
T 3hyw_A 118 --ENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFG 195 (430)
T ss_dssp --HHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTT
T ss_pred --cCcCCcccHHHHHHHHHHHHhhccCCceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhcccccceeeeecccchhhhcc
Confidence 2234567888888888877643 234455555542 233444 4445554 57888887765432
Q ss_pred cccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCC--cEEecCEEEEccCCCCChhhhhcccc--c-C
Q 012545 228 RLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDG--RTLEADIVVVGVGGRPLISLFKGQVA--E-N 302 (461)
Q Consensus 228 ~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G--~~i~aD~vi~a~G~~p~~~~~~~~~~--~-~ 302 (461)
....+...+.+++.++++||++++++.|++++. ++ ..+...+| +++++|.+++++|.+|+..+...+.. . .
T Consensus 196 ~~~~~~~~~~l~~~l~~~GV~~~~~~~v~~v~~--~~--~~~~~~~g~~~~i~~d~vi~~~G~~~~~~~~~~~~~l~~~~ 271 (430)
T 3hyw_A 196 VGGIGASKRLVEDLFAERNIDWIANVAVKAIEP--DK--VIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKVANPA 271 (430)
T ss_dssp TTCSTTHHHHHHHHHHHTTCEEECSCEEEEECS--SE--EEEECTTSCEEEEECSEEEEECEEECCHHHHTTCTTTBCTT
T ss_pred chhhHHHHHHHHHHHHhCCeEEEeCceEEEEeC--Cc--eEEEeeCCCceEeecceEEEeccCCCchHHHhcccccccCC
Confidence 124567788899999999999999999999964 32 23444444 57999999999999998766555433 3 4
Q ss_pred CCcEEeCCCCC-CCCCCEEEeCcccccCccccCc--ceeeccHHHHHHHHHHHHHHHhcccCCCc
Q 012545 303 KGGIETDDFFK-TSADDVYAVGDVATFPMKLYRE--MRRVEHVDHARKSAEQAVKTIMATEGGKT 364 (461)
Q Consensus 303 ~g~i~vd~~~~-t~~~~vya~GD~~~~~~~~~~~--~~~~~~~~~A~~~g~~aa~~i~~~~~~~~ 364 (461)
+|.|.||++|| |++|||||+|||+..+...... ...++....|.+||+++|+||++...|++
T Consensus 272 ~g~i~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g~~ 336 (430)
T 3hyw_A 272 NKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNP 336 (430)
T ss_dssp TCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ceEEEecccccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 56799999999 7999999999999876431111 01236788999999999999998876643
No 67
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=100.00 E-value=3.3e-36 Score=303.43 Aligned_cols=318 Identities=16% Similarity=0.171 Sum_probs=231.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHH---cCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCH
Q 012545 3 EKSFKYVILGGGVSAGYAAREFAK---QGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLP 79 (461)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~L~~---~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (461)
+.++||||||||+||++||..|++ .|++ |+|||+++.+.|. +.+. .+... .... ......+.
T Consensus 2 ~~m~~vvIIGgG~aGl~aA~~L~~~~~~g~~---Vtlie~~~~~~~~-~~~~-~~~~g--~~~~--------~~~~~~l~ 66 (437)
T 3sx6_A 2 RGSAHVVILGAGTGGMPAAYEMKEALGSGHE---VTLISANDYFQFV-PSNP-WVGVG--WKER--------DDIAFPIR 66 (437)
T ss_dssp TTSCEEEEECCSTTHHHHHHHHHHHHGGGSE---EEEECSSSEEECG-GGHH-HHHHT--SSCH--------HHHEEECH
T ss_pred CCCCcEEEECCcHHHHHHHHHHhccCCCcCE---EEEEeCCCCCccc-CCcc-ccccC--ccCH--------HHHHHHHH
Confidence 346899999999999999999999 6665 9999999865543 2111 00000 0000 00123467
Q ss_pred hHHHHcCcEEEcCCeEEEEeCCCCEEEcCCCcEEecCEEEEccCCCccccccccccccCccccccccCCcccccccccCC
Q 012545 80 EWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDF 159 (461)
Q Consensus 80 ~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~ 159 (461)
+++++.+++++.+ +++.++.+.+.|.+.+++++.||+||+|||+++..|.+||+.+
T Consensus 67 ~~~~~~gv~~~~~-~v~~id~~~~~V~~~~g~~i~~d~lviAtG~~~~~~~ipG~~~----------------------- 122 (437)
T 3sx6_A 67 HYVERKGIHFIAQ-SAEQIDAEAQNITLADGNTVHYDYLMIATGPKLAFENVPGSDP----------------------- 122 (437)
T ss_dssp HHHHTTTCEEECS-CEEEEETTTTEEEETTSCEEECSEEEECCCCEECGGGSTTCST-----------------------
T ss_pred HHHHHCCCEEEEe-EEEEEEcCCCEEEECCCCEEECCEEEECCCCCcCcccCCCCCc-----------------------
Confidence 7888899999875 9999999999999999988999999999999997666666431
Q ss_pred CCCCCCCCCEEEeCCHHHHHHHHHHHHhc-CCCcEEEECCCHH----H--HHHH----HHHHHCCCc-----EEEEccCC
Q 012545 160 GVEGADAKNIFYLREIDDADKLVEAIKAK-KNGKAVVVGGGYI----G--LELS----AALKINNID-----VSMVYPEP 223 (461)
Q Consensus 160 ~~~g~~~~~v~~~~~~~~~~~l~~~l~~~-~~~~v~VvG~G~~----g--~e~a----~~l~~~g~~-----Vtli~~~~ 223 (461)
...+.+.+.+..++..+.+.++.. ..++++|||+|.. | +|+| ..+.+.|.+ |+++++.+
T Consensus 123 -----~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~ 197 (437)
T 3sx6_A 123 -----HEGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEP 197 (437)
T ss_dssp -----TTSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSS
T ss_pred -----ccCcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCc
Confidence 013456667888888877766532 2345678888554 3 7777 666677865 99999988
Q ss_pred ccCCccc--CHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCC-----CcEEecCEEEEccCCCCChhhhh
Q 012545 224 WCMPRLF--TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKD-----GRTLEADIVVVGVGGRPLISLFK 296 (461)
Q Consensus 224 ~~~~~~~--~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~-----G~~i~aD~vi~a~G~~p~~~~~~ 296 (461)
.+....+ .++..+.+.+.+++.||+++++++|++++. ++........+ ++++++|.+++++|++|+..+.+
T Consensus 198 ~~~~~~l~~~~~~~~~~~~~l~~~gI~~~~~~~v~~v~~--~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~~~~~ 275 (437)
T 3sx6_A 198 YIGHLGIQGVGDSKGILTKGLKEEGIEAYTNCKVTKVED--NKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPAVAG 275 (437)
T ss_dssp STTCTTTTCCTTHHHHHHHHHHHTTCEEECSEEEEEEET--TEEEEEEECTTSCEEEEEEEECSEEEEECCEECCHHHHT
T ss_pred cccccccCcchHHHHHHHHHHHHCCCEEEcCCEEEEEEC--CeEEEEecccCCccccceEEEEeEEEEcCCCcCchhhhc
Confidence 7632111 135788899999999999999999999975 33211111233 56799999999999999877665
Q ss_pred -cccccCCCcEEeCCCCCC-CCCCEEEeCcccccCccccCcc---eeeccHHHHHHHHHHHHHHHhcccCCCcccC
Q 012545 297 -GQVAENKGGIETDDFFKT-SADDVYAVGDVATFPMKLYREM---RRVEHVDHARKSAEQAVKTIMATEGGKTVTG 367 (461)
Q Consensus 297 -~~~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~~~~~~~~~---~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~ 367 (461)
.++..++|+|.||+++|| ++|||||+|||+..+... +.. ...++...|..||+.||+||...+.|++...
T Consensus 276 ~~gl~~~~G~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~-~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g~~~~~ 350 (437)
T 3sx6_A 276 VEGLCNPGGFVLVDEHQRSKKYANIFAAGIAIAIPPVE-TTPVPTGAPKTGYMIESMVSAAVHNIKADLEGRKGEQ 350 (437)
T ss_dssp STTTBCTTSCBCBCTTSBBSSCTTEEECGGGBCCCCSC-CCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTTSCCCC
T ss_pred cccccCCCCcEEeChhccCCCCCCEEEEEEEeccCCcC-CCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 355457899999999999 999999999999876421 111 0136788999999999999998887765444
No 68
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=100.00 E-value=4.9e-36 Score=299.77 Aligned_cols=291 Identities=21% Similarity=0.263 Sum_probs=227.1
Q ss_pred CeEEEEcCChHHHHHHHHHHH---cCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHH
Q 012545 6 FKYVILGGGVSAGYAAREFAK---QGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY 82 (461)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~L~~---~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (461)
+||||||||+||+++|..|++ .|++ |+|||+++.+.|. +.+..... ..... .+....+.+++
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~---V~vie~~~~~~~~-~~~~~~~~---~~~~~--------~~~~~~~~~~~ 66 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKAD---VKVINKSRFSYFR-PALPHVAI---GVRDV--------DELKVDLSEAL 66 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSE---EEEEESSSEEEEC-CSSCCCCS---SCCCC--------CCEEEEHHHHT
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCe---EEEEeCCCCceec-cchhhccc---CCcCH--------HHHHHHHHHHH
Confidence 489999999999999999999 6765 9999999864332 22211000 00011 11123456667
Q ss_pred HHcCcEEEcCCeEEEEeCCCCEEEcCCCc----EEecCEEEEccCCCccccccccccccCccccccccCCcccccccccC
Q 012545 83 KEKGIELILSTEIVRADIASKTLLSATGL----IFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTD 158 (461)
Q Consensus 83 ~~~~v~~~~~~~v~~i~~~~~~v~~~~~~----~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~ 158 (461)
++.+++++.+ +|+.++.+.+.|.+.+++ ++.||+||+|||++|.+|.+||+.+
T Consensus 67 ~~~gv~~~~~-~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~~~~ipG~~~---------------------- 123 (409)
T 3h8l_A 67 PEKGIQFQEG-TVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATELVKGWDK---------------------- 123 (409)
T ss_dssp GGGTCEEEEC-EEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEECGGGSBTHHH----------------------
T ss_pred hhCCeEEEEe-eEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCcCccCCCChhh----------------------
Confidence 7889999998 999999998888887765 3899999999999997776666531
Q ss_pred CCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCH-------------------------HHHHHHH----HH
Q 012545 159 FGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGY-------------------------IGLELSA----AL 209 (461)
Q Consensus 159 ~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~-------------------------~g~e~a~----~l 209 (461)
..++..+.+++.++++.+.... ++++|||+|+ .++|+|. .+
T Consensus 124 ---------~~~~~~~~~~~~~~~~~l~~~~-~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l 193 (409)
T 3h8l_A 124 ---------YGYSVCEPEFATKLREKLESFQ-GGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYF 193 (409)
T ss_dssp ---------HCEESSSTTHHHHHHHHHHHCC-SEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHH
T ss_pred ---------cCcCcCCHHHHHHHHHHHHHhc-CCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHH
Confidence 2345556777888888777643 5667899992 4677764 55
Q ss_pred HHCCC----cEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEc
Q 012545 210 KINNI----DVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVG 285 (461)
Q Consensus 210 ~~~g~----~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a 285 (461)
.+.|. +|+++++.+ +++. +++++.+.+.+.+++.||+++++++|++++. + .+++++|+++++|.||++
T Consensus 194 ~~~g~~~~~~v~~~~~~~-~l~~-~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~--~----~v~~~~g~~~~~D~vi~a 265 (409)
T 3h8l_A 194 KKKGMLDKVHVTVFSPGE-YLSD-LSPNSRKAVASIYNQLGIKLVHNFKIKEIRE--H----EIVDEKGNTIPADITILL 265 (409)
T ss_dssp HTTTCTTTEEEEEECSSS-SSTT-BCHHHHHHHHHHHHHHTCEEECSCCEEEECS--S----EEEETTSCEEECSEEEEE
T ss_pred HHcCCCCCeEEEEEeCCc-cccc-cCHHHHHHHHHHHHHCCCEEEcCCceEEECC--C----eEEECCCCEEeeeEEEEC
Confidence 66774 899999988 6665 7899999999999999999999999999965 2 378899999999999999
Q ss_pred cCCCCChhhhhc--ccccCCCcEEeCCCCCC-CCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhccc
Q 012545 286 VGGRPLISLFKG--QVAENKGGIETDDFFKT-SADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATE 360 (461)
Q Consensus 286 ~G~~p~~~~~~~--~~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 360 (461)
+|++|+..+.+. ++..++|+|.||+++|| +.|||||+|||+..+.+ +.+..|..||++||+||.+..
T Consensus 266 ~G~~~~~~l~~~~~~l~~~~G~i~vd~~~~~~~~~~vfa~GD~~~~~~~--------~~~~~A~~q~~~aa~~i~~~l 335 (409)
T 3h8l_A 266 PPYTGNPALKNSTPDLVDDGGFIPTDLNMVSIKYDNVYAVGDANSMTVP--------KLGYLAVMTGRIAAQHLANRL 335 (409)
T ss_dssp CCEECCHHHHTSCGGGSCTTSCBCBBTTSBBSSCTTEEECGGGBTTCCS--------CCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCccHHHHhccccCcCCCCCEEeCcccccCCCCCEEEeehhccCCCC--------cHHHHHHHHHHHHHHHHHHHh
Confidence 999999655555 44446789999999999 99999999999986443 678899999999999998876
No 69
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=5.3e-37 Score=294.45 Aligned_cols=286 Identities=14% Similarity=0.116 Sum_probs=197.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCC---CCCCCH
Q 012545 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSG---GERLLP 79 (461)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 79 (461)
|+.|||+||||||||++||..|+++|++ |+|+|++.... .+. ..++++....+.. ......
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~---v~lie~~~~gg--------~~~-----~~~~~~~~~~~~~~~~~~~~~~ 67 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQ---IALFDNNTNRN--------RVT-----QNSHGFITRDGIKPEEFKEIGL 67 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCC---EEEEECSCCGG--------GGS-----SCBCCSTTCTTBCHHHHHHHHH
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCC---EEEEeCCCCCC--------eee-----eecCCccCCCCCCHHHHHHHHH
Confidence 5689999999999999999999999987 99999985311 110 0111111000000 000111
Q ss_pred hHHHHc-CcEEEcCCeEEEEeC-C--CCEEEcCCCcEEecCEEEEccCCCccccccccccccCccccccccCCccccccc
Q 012545 80 EWYKEK-GIELILSTEIVRADI-A--SKTLLSATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLR 155 (461)
Q Consensus 80 ~~~~~~-~v~~~~~~~v~~i~~-~--~~~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~ 155 (461)
+.+.++ ++.++.. .+..+.. + .+.+.+.+++++.||+||||||++|..|++||..++
T Consensus 68 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p~~p~i~G~~~~------------------ 128 (304)
T 4fk1_A 68 NEVMKYPSVHYYEK-TVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQEEFPSIPNVREY------------------ 128 (304)
T ss_dssp HHHTTSTTEEEEEC-CEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCEEECCSCTTHHHH------------------
T ss_pred HHHHhcCCEEEEee-EEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCccccccccCcccc------------------
Confidence 222233 4555555 4544432 2 246788889999999999999999988887776420
Q ss_pred ccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCH-HHHHHHHHHHHCCCcEEEEccCCccCCcccCHHH
Q 012545 156 LTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGY-IGLELSAALKINNIDVSMVYPEPWCMPRLFTADI 234 (461)
Q Consensus 156 ~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~-~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~ 234 (461)
...++++....+.. ..++++++|||+|. .+.|+|..+.+.+.+|+++.+.+.+.
T Consensus 129 ---------~~~~v~~~~~~~~~--------~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~~-------- 183 (304)
T 4fk1_A 129 ---------YGKSLFSCPYCDGW--------ELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNELS-------- 183 (304)
T ss_dssp ---------BTTTEESCHHHHSG--------GGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCCC--------
T ss_pred ---------ccceeeeccccchh--------HhcCCceeeecCCCchhhhHHHHHHhCCceEEEEeccccch--------
Confidence 01223322211111 11467888888875 56899999999999999998866532
Q ss_pred HHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChhhh-hccccc-CCCcEEeCCCC
Q 012545 235 AAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLF-KGQVAE-NKGGIETDDFF 312 (461)
Q Consensus 235 ~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~~~-~~~~~~-~~g~i~vd~~~ 312 (461)
+.+.+.|++.|++++.+ .++.+.. +++.+..+++++|+++++|.++++.|.+|+..++ +.+++. ++|+|.||+++
T Consensus 184 -~~~~~~l~~~g~~~~~~-~v~~~~~-~~~~~~~v~~~~g~~i~~~~~vi~~g~~~~~~~~~~~g~~~~~~G~I~vd~~~ 260 (304)
T 4fk1_A 184 -QTIMDELSNKNIPVITE-SIRTLQG-EGGYLKKVEFHSGLRIERAGGFIVPTFFRPNQFIEQLGCELQSNGTFVIDDFG 260 (304)
T ss_dssp -HHHHHHHHTTTCCEECS-CEEEEES-GGGCCCEEEETTSCEECCCEEEECCEEECSSCHHHHTTCCCCTTSSSCSSTTC
T ss_pred -hhhhhhhhccceeEeee-eEEEeec-CCCeeeeeeccccceeeecceeeeeccccCChhhhhcCeEECCCCCEEECcCC
Confidence 23456788899999876 4777765 4566778999999999999888887766655544 556776 67889999999
Q ss_pred CCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhccc
Q 012545 313 KTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATE 360 (461)
Q Consensus 313 ~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 360 (461)
|||+|+|||+|||++.+. .++..|..+|+.||.+|...+
T Consensus 261 ~Ts~p~IyA~GDv~~~~~---------~~~~~A~~~G~~AA~~i~~~L 299 (304)
T 4fk1_A 261 RTSEKNIYLAGETTTQGP---------SSLIIAASQGNKAAIAINSDI 299 (304)
T ss_dssp BCSSTTEEECSHHHHTSC---------CCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEeccCCCcc---------hHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999997543 467889999999999986543
No 70
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=1.6e-36 Score=294.83 Aligned_cols=306 Identities=19% Similarity=0.182 Sum_probs=213.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeec-CCCCCCCCHhH
Q 012545 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCV-GSGGERLLPEW 81 (461)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 81 (461)
++.+||+|||||++|+++|..|++.|++ |+|+|+...... .....+........++.+.... .......+.+.
T Consensus 6 ~~~~~vvIIG~G~aGl~~A~~l~~~g~~---v~lie~~~~~~~---~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 79 (333)
T 1vdc_A 6 THNTRLCIVGSGPAAHTAAIYAARAELK---PLLFEGWMANDI---APGGQLTTTTDVENFPGFPEGILGVELTDKFRKQ 79 (333)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCC---CEEECCSSBTTB---CTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCe---EEEEeccCcccc---CCCceeeeccccccCCCCccCCCHHHHHHHHHHH
Confidence 4468999999999999999999999987 999998210000 0011111111111222221100 00111223455
Q ss_pred HHHcCcEEEcCCeEEEEeCCCC--EEEcCCCcEEecCEEEEccCCCccccccccccccCccccccccCCcccccccccCC
Q 012545 82 YKEKGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDF 159 (461)
Q Consensus 82 ~~~~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~ 159 (461)
+++.+++++.++ +..++.+.+ .+.+ ++.++.||++|+|||+++..|.+||..... .
T Consensus 80 ~~~~gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~~~~~~g~~~~~------------------~-- 137 (333)
T 1vdc_A 80 SERFGTTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAKRLSFVGSGEVL------------------G-- 137 (333)
T ss_dssp HHHTTCEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEECCCCCBTCSSSS------------------S--
T ss_pred HHHCCCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcCCCCCCCccccc------------------c--
Confidence 667899999985 888887665 5666 677899999999999999777777653200 0
Q ss_pred CCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHH
Q 012545 160 GVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYE 239 (461)
Q Consensus 160 ~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~ 239 (461)
......++....... .+....+++++|+|+|.+|+|+|..|.+.|.+|+++++.+.+.. .+.+ ..
T Consensus 138 ---~~~~~~~~~~~~~~~------~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~---~~~~---~~ 202 (333)
T 1vdc_A 138 ---GFWNRGISACAVCDG------AAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA---SKIM---QQ 202 (333)
T ss_dssp ---CCBTTTEESCHHHHT------TSGGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS---CHHH---HH
T ss_pred ---ccccCcEEEeccCcc------chhhcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc---cHHH---HH
Confidence 000112222211111 11112578999999999999999999999999999999887643 2222 23
Q ss_pred HHHHhcCcEEEcCCcEEEEEecCCC-CEEEEEeC---CC--cEEecCEEEEccCCCCChhhhhccccc-CCCcEEeCCC-
Q 012545 240 GYYANKGIKIIKGTVAVGFTTNADG-EVKEVKLK---DG--RTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDF- 311 (461)
Q Consensus 240 ~~l~~~GV~v~~~~~v~~i~~~~~g-~~~~v~~~---~G--~~i~aD~vi~a~G~~p~~~~~~~~~~~-~~g~i~vd~~- 311 (461)
+.+++.||+++++++++++..++++ .+..+++. +| +++++|.||+|+|++|+.++++.++.. ++|+|.||++
T Consensus 203 ~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~~l~~~~~G~i~vd~~~ 282 (333)
T 1vdc_A 203 RALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFLDGGVELDSDGYVVTKPGT 282 (333)
T ss_dssp HHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTSSCBCTTSCBCCCTTS
T ss_pred HHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccchHHhhccccccCCCCEEechhh
Confidence 4457789999999999999873221 55556664 45 579999999999999999988766665 4789999987
Q ss_pred CCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhccc
Q 012545 312 FKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATE 360 (461)
Q Consensus 312 ~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 360 (461)
++|+.|+|||+|||+..+. ..+..|..+|+.||.+|...+
T Consensus 283 ~~t~~~~vya~GD~~~~~~---------~~~~~A~~~g~~aa~~i~~~l 322 (333)
T 1vdc_A 283 TQTSVPGVFAAGDVQDKKY---------RQAITAAGTGCMAALDAEHYL 322 (333)
T ss_dssp CBCSSTTEEECGGGGCSSC---------CCHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCEEEeeeccCCCc---------hhHHHHHHhHHHHHHHHHHHH
Confidence 6899999999999998752 468889999999999998655
No 71
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.4e-36 Score=290.04 Aligned_cols=282 Identities=16% Similarity=0.125 Sum_probs=207.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
++||+|||||+||+++|..|++.|++ |+|+|+++.... +.. ....++.............+.+.+.+
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~~~~--------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKN---ILLVDAGERRNR--------FAS--HSHGFLGQDGKAPGEIIAEARRQIER 68 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCC---EEEEECCCCGGG--------GCS--CCCSSTTCTTCCHHHHHHHHHHHHTT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCC---EEEEeCCCcccc--------cch--hhcCCcCCCCCCHHHHHHHHHHHHHh
Confidence 38999999999999999999999986 999999753110 000 00111111000000001122334444
Q ss_pred c-CcEEEcCCeEEEEeCCCC--EEEcCCCcEEecCEEEEccCCCccccccccccccCccccccccCCcccccccccCCCC
Q 012545 85 K-GIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGV 161 (461)
Q Consensus 85 ~-~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 161 (461)
. +++++.+ +|+.++.+.. .+.+.+++++.||++|+|||+.|.+|.+||+..+
T Consensus 69 ~~~v~~~~~-~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~~~~~g~~~~------------------------ 123 (297)
T 3fbs_A 69 YPTIHWVEG-RVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDELPEIAGLRER------------------------ 123 (297)
T ss_dssp CTTEEEEES-CEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEEECCCCBTTGGG------------------------
T ss_pred cCCeEEEEe-EEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCCCCCCCCchhh------------------------
Confidence 4 7888775 8999987654 5777888889999999999999988887776420
Q ss_pred CCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHHH
Q 012545 162 EGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGY 241 (461)
Q Consensus 162 ~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~ 241 (461)
. ...+++.. ..+.. ...+++++|+|+|++|+|+|..|.+.| +|+++.+.+.. +++ .+.+.
T Consensus 124 ~---~~~~~~~~-~~~~~-------~~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~~----~~~----~~~~~ 183 (297)
T 3fbs_A 124 W---GSAVFHCP-YCHGY-------ELDQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIVE----PDA----DQHAL 183 (297)
T ss_dssp B---TTTEESCH-HHHTG-------GGTTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTCC----CCH----HHHHH
T ss_pred c---CCeeEEcc-cCcch-------hhcCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCCC----CCH----HHHHH
Confidence 0 12233221 11111 115789999999999999999999999 99999987752 333 45678
Q ss_pred HHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChhhhhc-ccccC---CC-cEEeCCCCCCCC
Q 012545 242 YANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKG-QVAEN---KG-GIETDDFFKTSA 316 (461)
Q Consensus 242 l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~~~~~-~~~~~---~g-~i~vd~~~~t~~ 316 (461)
+++.||+++. ++++++.. ++ .+++.+|+++++|.||+|+|++|+.++++. ++..+ +| ++.||++++|+.
T Consensus 184 l~~~gv~i~~-~~v~~i~~--~~---~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~g~~~~~~~~G~~i~vd~~~~t~~ 257 (297)
T 3fbs_A 184 LAARGVRVET-TRIREIAG--HA---DVVLADGRSIALAGLFTQPKLRITVDWIEKLGCAVEEGPMGSTIVTDPMKQTTA 257 (297)
T ss_dssp HHHTTCEEEC-SCEEEEET--TE---EEEETTSCEEEESEEEECCEEECCCSCHHHHTCCEEEETTEEEECCCTTCBCSS
T ss_pred HHHCCcEEEc-ceeeeeec--CC---eEEeCCCCEEEEEEEEEccCcccCchhHHhcCCccccCCCCceEEeCCCCccCC
Confidence 8889999995 89999975 33 688999999999999999999999887753 45443 45 899999999999
Q ss_pred CCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhccc
Q 012545 317 DDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATE 360 (461)
Q Consensus 317 ~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 360 (461)
|+|||+|||+..+ +.+..|..||+.||.+|....
T Consensus 258 ~~vya~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~l 291 (297)
T 3fbs_A 258 RGIFACGDVARPA----------GSVALAVGDGAMAGAAAHRSI 291 (297)
T ss_dssp TTEEECSGGGCTT----------CCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEeecCCch----------HHHHHHHHhHHHHHHHHHHHH
Confidence 9999999999864 578899999999999998654
No 72
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.3e-36 Score=292.17 Aligned_cols=295 Identities=16% Similarity=0.182 Sum_probs=212.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecC-CCCCCCCHhH
Q 012545 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVG-SGGERLLPEW 81 (461)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 81 (461)
++.+||+|||||++|+++|..|++.|++ |+|+|+..... .+........++.+..... ......+.++
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~gg--------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 80 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLA---PLVFEGTSFGG--------ALMTTTDVENYPGFRNGITGPELMDEMREQ 80 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCC---CEEECCSSCSC--------GGGSCSCBCCSTTCTTCBCHHHHHHHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCe---EEEEecCCCCC--------ceeccchhhhcCCCCCCCCHHHHHHHHHHH
Confidence 3568999999999999999999999987 99999763211 1111111122222211000 0111223455
Q ss_pred HHHcCcEEEcCCeEEEEeCCC-CEE-EcCCCcEEecCEEEEccCCCccccccccccccCccccccccCCcccccccccCC
Q 012545 82 YKEKGIELILSTEIVRADIAS-KTL-LSATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDF 159 (461)
Q Consensus 82 ~~~~~v~~~~~~~v~~i~~~~-~~v-~~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~ 159 (461)
+.+.+++++.++ +..++... ..+ .+.+++++.||+||+|||+.|..|++||...+
T Consensus 81 ~~~~~v~~~~~~-v~~i~~~~~~~v~~~~~g~~~~~d~lviAtG~~~~~~~i~g~~~~---------------------- 137 (335)
T 2a87_A 81 ALRFGADLRMED-VESVSLHGPLKSVVTADGQTHRARAVILAMGAAARYLQVPGEQEL---------------------- 137 (335)
T ss_dssp HHHTTCEEECCC-EEEEECSSSSEEEEETTSCEEEEEEEEECCCEEECCCCCTHHHHT----------------------
T ss_pred HHHcCCEEEEee-EEEEEeCCcEEEEEeCCCCEEEeCEEEECCCCCccCCCCCchHhc----------------------
Confidence 667899999985 88888732 356 67778889999999999999987777775320
Q ss_pred CCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHH
Q 012545 160 GVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYE 239 (461)
Q Consensus 160 ~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~ 239 (461)
....++.+....+. + ..+++++|||+|++|+|+|..|.+.|.+|+++++.+.+.. ...+ ..
T Consensus 138 -----~~~~~~~~~~~~~~------~--~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~---~~~~---~~ 198 (335)
T 2a87_A 138 -----LGRGVSSCATCDGF------F--FRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA---SKIM---LD 198 (335)
T ss_dssp -----BTTTEESCHHHHGG------G--GTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS---CTTH---HH
T ss_pred -----cCCceEEeeccchh------h--cCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc---cHHH---HH
Confidence 01223322222211 1 1578999999999999999999999999999999887643 2222 22
Q ss_pred HHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeC---CC--cEEecCEEEEccCCCCChhhhhccccc-CCCcEEeCCC-C
Q 012545 240 GYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK---DG--RTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDF-F 312 (461)
Q Consensus 240 ~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~---~G--~~i~aD~vi~a~G~~p~~~~~~~~~~~-~~g~i~vd~~-~ 312 (461)
+.+++.||+++++++++++.. ++.+..+.+. +| +++++|.||+|+|++|+.++++.++.. ++|+|.||++ +
T Consensus 199 ~~~~~~gV~v~~~~~v~~i~~--~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~~l~~~~~G~i~vd~~~~ 276 (335)
T 2a87_A 199 RARNNDKIRFLTNHTVVAVDG--DTTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLVREAIDVDPDGYVLVQGRTT 276 (335)
T ss_dssp HHHHCTTEEEECSEEEEEEEC--SSSCCEEEEEEETTSCCEEECCSCEEECSCEEECCTTTBTTBCBCTTSCBCCSTTSS
T ss_pred HHhccCCcEEEeCceeEEEec--CCcEeEEEEEEcCCCceEEeecCEEEEccCCccChhHhhcccccCCCccEEeCCCCC
Confidence 445778999999999999986 3333345443 45 579999999999999999988756665 5789999986 6
Q ss_pred CCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccC
Q 012545 313 KTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEG 361 (461)
Q Consensus 313 ~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~ 361 (461)
+|+.|+|||+|||+..+. ..+..|..+|+.||.+|...+.
T Consensus 277 ~t~~~~iya~GD~~~~~~---------~~~~~A~~~g~~aA~~i~~~l~ 316 (335)
T 2a87_A 277 STSLPGVFAAGDLVDRTY---------RQAVTAAGSGCAAAIDAERWLA 316 (335)
T ss_dssp BCSSTTEEECGGGTCCSC---------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEeeecCCccH---------HHHHHHHHhHHHHHHHHHHHhh
Confidence 899999999999998642 4678899999999999986553
No 73
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=1.9e-35 Score=303.71 Aligned_cols=293 Identities=19% Similarity=0.241 Sum_probs=216.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHH
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (461)
..+||+|||||+||++||..|++.|++ |+|+|+..... +........++.+...........+...++
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~---v~lie~~~GG~---------~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 278 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIR---TGLMGERFGGQ---------VLDTVDIENYISVPKTEGQKLAGALKAHVS 278 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSTTGG---------GTTCSCBCCBTTBSSBCHHHHHHHHHHHHH
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCe---EEEEECCCCCc---------ccccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 468999999999999999999999987 99998742111 110000111111110000011123345566
Q ss_pred HcCcEEEcCCeEEEEeCC-----CCEEEcCCCcEEecCEEEEccCCCccccccccccccCccccccccCCcccccccccC
Q 012545 84 EKGIELILSTEIVRADIA-----SKTLLSATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTD 158 (461)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~-----~~~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~ 158 (461)
+++++++.+++|..++.+ ...|.+.+|+++.||++|+|||+++..|.+||..++
T Consensus 279 ~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~~~ipG~~~~--------------------- 337 (521)
T 1hyu_A 279 DYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRNMNVPGEDQY--------------------- 337 (521)
T ss_dssp TSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTTT---------------------
T ss_pred HcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCCCCCCChhhh---------------------
Confidence 789999999999999864 345777888889999999999999977777775421
Q ss_pred CCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHH
Q 012545 159 FGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFY 238 (461)
Q Consensus 159 ~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~ 238 (461)
....++++...... ...+++|+|||+|++|+|+|..|++.+.+|+++++.+.+.. + +.+
T Consensus 338 ------~~~~v~~~~~~~~~--------~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~---~----~~l 396 (521)
T 1hyu_A 338 ------RTKGVTYCPHCDGP--------LFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA---D----QVL 396 (521)
T ss_dssp ------TTTTEECCTTCCGG--------GGBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS---C----HHH
T ss_pred ------cCceEEEeecCchh--------hcCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc---C----HHH
Confidence 11223332221110 11578999999999999999999999999999999887753 3 345
Q ss_pred HHHHHh-cCcEEEcCCcEEEEEecCCCCEEEEEeCC---Cc--EEecCEEEEccCCCCChhhhhccccc-CCCcEEeCCC
Q 012545 239 EGYYAN-KGIKIIKGTVAVGFTTNADGEVKEVKLKD---GR--TLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDF 311 (461)
Q Consensus 239 ~~~l~~-~GV~v~~~~~v~~i~~~~~g~~~~v~~~~---G~--~i~aD~vi~a~G~~p~~~~~~~~~~~-~~g~i~vd~~ 311 (461)
.+.|++ .||++++++.++++.. +++++..+.+.+ |+ ++++|.|++++|++||++++...+.. .+|+|.||++
T Consensus 397 ~~~l~~~~gV~v~~~~~v~~i~~-~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~~l~~~l~~~~~G~I~Vd~~ 475 (521)
T 1hyu_A 397 QDKVRSLKNVDIILNAQTTEVKG-DGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTHWLEGALERNRMGEIIIDAK 475 (521)
T ss_dssp HHHHTTCTTEEEECSEEEEEEEE-CSSSEEEEEEEETTTCCEEEEECSEEEECCCEEESCGGGTTTSCBCTTSCBCCCTT
T ss_pred HHHHhcCCCcEEEeCCEEEEEEc-CCCcEEEEEEEeCCCCceEEEEcCEEEECcCCCCCchHHhhhhccCCCCcEEeCCC
Confidence 566776 6999999999999987 345665666653 53 68999999999999999888765555 5789999999
Q ss_pred CCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhccc
Q 012545 312 FKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATE 360 (461)
Q Consensus 312 ~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 360 (461)
+||+.|+|||+|||+..+. +.+..|..+|+.||.+|...+
T Consensus 476 ~~ts~p~VfA~GD~~~~~~---------~~~~~A~~~g~~aa~~i~~~L 515 (521)
T 1hyu_A 476 CETSVKGVFAAGDCTTVPY---------KQIIIATGEGAKASLSAFDYL 515 (521)
T ss_dssp CBCSSTTEEECSTTBCCSS---------CCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEeecccCCCc---------ceeeehHHhHHHHHHHHHHHH
Confidence 9999999999999998753 578899999999999998654
No 74
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=3.2e-35 Score=287.87 Aligned_cols=302 Identities=17% Similarity=0.236 Sum_probs=203.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCC--CCCCcccccccCCCCCCCCCCceeecCC-------CCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP--YERPALSKAYLFPEGTARLPGFHVCVGS-------GGE 75 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 75 (461)
++||+|||||++|+++|..|+++|++ |+|+|+++... |........+..+.....++.+...... ...
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~---v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLS---YVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVL 79 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCC---EEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCC---EEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHH
Confidence 68999999999999999999999987 99999986532 1100000001111111112221111000 001
Q ss_pred CCCHhHHHHcCcEEEcCCeEEEEeCCCCE---EEcCCCcEEecCEEEEccC--CCccccccccccccCccccccccCCcc
Q 012545 76 RLLPEWYKEKGIELILSTEIVRADIASKT---LLSATGLIFKYQILVIATG--STVSITSLTSIRSKHCLCCFFLRTLPL 150 (461)
Q Consensus 76 ~~~~~~~~~~~v~~~~~~~v~~i~~~~~~---v~~~~~~~~~~d~liiAtG--~~~~~~~~~g~~~~~~~~~~~~~~~p~ 150 (461)
..+.+.+++.+++++.+++|+.++.+.+. |.+.++ ++.||+||+||| +.|.+|++||+.++.
T Consensus 80 ~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~~~~~~~~g~~~~~------------ 146 (357)
T 4a9w_A 80 AYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWGEAYTPEYQGLESFA------------ 146 (357)
T ss_dssp HHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGGGBCCCCCTTGGGCC------------
T ss_pred HHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCCCCCCCCCCCccccC------------
Confidence 12334556789999999999999887765 666666 799999999999 567777777764311
Q ss_pred cccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccC-CccCCcc
Q 012545 151 FQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPE-PWCMPRL 229 (461)
Q Consensus 151 ~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~-~~~~~~~ 229 (461)
...++.....+.. ..++++++|||+|++|+|+|..|.+.+ +|+++.+. +.+++..
T Consensus 147 ----------------~~~~~~~~~~~~~-------~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~ 202 (357)
T 4a9w_A 147 ----------------GIQLHSAHYSTPA-------PFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADD 202 (357)
T ss_dssp ----------------SEEEEGGGCCCSG-------GGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTT
T ss_pred ----------------CcEEEeccCCChh-------hcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchh
Confidence 0111111111111 114789999999999999999999998 69999887 5555543
Q ss_pred c-CHHHHHHHHHHHH----------------------------hcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecC
Q 012545 230 F-TADIAAFYEGYYA----------------------------NKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEAD 280 (461)
Q Consensus 230 ~-~~~~~~~~~~~l~----------------------------~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD 280 (461)
+ +..+.+.+.+.+. +.|+ +..+..+++++. + .+.+++|+++++|
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-i~~~~~v~~~~~--~----~v~~~~g~~i~~D 275 (357)
T 4a9w_A 203 VDGRVLFERATERWKAQQEGREPDLPPGGFGDIVMVPPVLDARARGV-LAAVPPPARFSP--T----GMQWADGTERAFD 275 (357)
T ss_dssp CCTHHHHTC----------------------CBCCCHHHHHHHHTTC-CCEECCCSEEET--T----EEECTTSCEEECS
T ss_pred hcCccHHHHHHHHHhccccccCCCcccccccCcccChhHHHHHhcCc-eEEecCcceEeC--C----eeEECCCCEecCC
Confidence 2 3444433333332 3444 555566777754 2 4889999999999
Q ss_pred EEEEccCCCCChhhhhc-ccccCCCcEEeCCC--CCCCCCCEEEeC--cccccCccccCcceeeccHHHHHHHHHHHHHH
Q 012545 281 IVVVGVGGRPLISLFKG-QVAENKGGIETDDF--FKTSADDVYAVG--DVATFPMKLYREMRRVEHVDHARKSAEQAVKT 355 (461)
Q Consensus 281 ~vi~a~G~~p~~~~~~~-~~~~~~g~i~vd~~--~~t~~~~vya~G--D~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~ 355 (461)
.||+|+|++|++++++. ++..++|+|.||++ ++|+.|+|||+| ||+.... +.+..|..||+.+|.+
T Consensus 276 ~vi~a~G~~p~~~~l~~~gl~~~~G~i~vd~~~l~~t~~~~vya~Gd~d~~~~~~---------~~~~~A~~~g~~~a~~ 346 (357)
T 4a9w_A 276 AVIWCTGFRPALSHLKGLDLVTPQGQVEVDGSGLRALAVPSVWLLGYGDWNGMAS---------ATLIGVTRYAREAVRQ 346 (357)
T ss_dssp EEEECCCBCCCCGGGTTTTCBCTTSCBCBCTTSCBBSSCTTEEECSSCGGGSTTC---------SSTTTHHHHHHHHHHH
T ss_pred EEEECCCcCCCCcccCcccccCCCCCccccCCcccCCCCCCeEEeccccccccch---------hhhhhhHHHHHHHHHH
Confidence 99999999999888754 55557889999999 899999999999 6665322 4556689999999999
Q ss_pred HhcccCC
Q 012545 356 IMATEGG 362 (461)
Q Consensus 356 i~~~~~~ 362 (461)
|...+.+
T Consensus 347 i~~~l~g 353 (357)
T 4a9w_A 347 VTAYCAD 353 (357)
T ss_dssp HHHHTC-
T ss_pred HHHHHHh
Confidence 9987644
No 75
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=100.00 E-value=3.4e-34 Score=288.12 Aligned_cols=307 Identities=17% Similarity=0.172 Sum_probs=218.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
++||||||||+||+++|..|++.+ +..+|+|||+++.+.|. +.+.. +... ..... .....+.+++++
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~-~g~~Vtlie~~~~~~~~-~~~~~-~~~g--~~~~~--------~~~~~~~~~~~~ 68 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLM-PDLKITLISDRPYFGFT-PAFPH-LAMG--WRKFE--------DISVPLAPLLPK 68 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHC-TTCEEEEECSSSEEECG-GGHHH-HHHT--CSCGG--------GSEEESTTTGGG
T ss_pred CCCEEEECccHHHHHHHHHHHcCC-CCCeEEEECCCCCCCcC-CCcch-hccC--ccCHH--------HHHHHHHHHHHh
Confidence 369999999999999999999932 12349999999865543 21110 0000 00000 011234556677
Q ss_pred cCcEEEcCCeEEEEeCCCCEEEcCCCcEEecCEEEEccCCCccccccccccccCccccccccCCcccccccccCCCCCCC
Q 012545 85 KGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVEGA 164 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~ 164 (461)
.+++++.+ +++.++.+.+.+.+.+++++.||+||+|||+++.+| |+. .
T Consensus 69 ~gv~~~~~-~v~~id~~~~~v~~~~g~~i~~d~liiAtG~~~~~p---g~~-------------------------~--- 116 (430)
T 3h28_A 69 FNIEFINE-KAESIDPDANTVTTQSGKKIEYDYLVIATGPKLVFG---AEG-------------------------Q--- 116 (430)
T ss_dssp GTEEEECS-CEEEEETTTTEEEETTCCEEECSEEEECCCCEEECC---SBT-------------------------H---
T ss_pred cCCEEEEE-EEEEEECCCCEEEECCCcEEECCEEEEcCCcccccC---CCC-------------------------C---
Confidence 89999986 999999999999999998899999999999998432 210 0
Q ss_pred CCCCEEEeCCHHHHHHHHHHHHhc-CCCcEEEECCCHHH------HHHH----HHHHHCC----CcEEEEccCCccCCcc
Q 012545 165 DAKNIFYLREIDDADKLVEAIKAK-KNGKAVVVGGGYIG------LELS----AALKINN----IDVSMVYPEPWCMPRL 229 (461)
Q Consensus 165 ~~~~v~~~~~~~~~~~l~~~l~~~-~~~~v~VvG~G~~g------~e~a----~~l~~~g----~~Vtli~~~~~~~~~~ 229 (461)
......+.+.+++.++.+.++.. +.++++|||+|..+ +|+| ..+.+.| .+|+++++.+.+....
T Consensus 117 -~g~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~ 195 (430)
T 3h28_A 117 -EENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFG 195 (430)
T ss_dssp -HHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTT
T ss_pred -cCCccCcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCccccccc
Confidence 01112345667777666655432 23456788887543 7777 4555667 4899999988763210
Q ss_pred --cCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCC----CcEEecCEEEEccCCCCChhhhhc--cccc
Q 012545 230 --FTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKD----GRTLEADIVVVGVGGRPLISLFKG--QVAE 301 (461)
Q Consensus 230 --~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~----G~~i~aD~vi~a~G~~p~~~~~~~--~~~~ 301 (461)
..++..+.+.+.+++.||+++++++|++++. ++ +++++ ++++++|.+++++|++|+..+.+. ++..
T Consensus 196 l~~~~~~~~~l~~~l~~~GV~i~~~~~v~~v~~--~~----v~~~~~~~~g~~i~~D~vv~a~G~~~~~~l~~~~~gl~~ 269 (430)
T 3h28_A 196 VGGIGASKRLVEDLFAERNIDWIANVAVKAIEP--DK----VIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKVAN 269 (430)
T ss_dssp TTCSTTHHHHHHHHHHHTTCEEECSCEEEEECS--SE----EEEECTTSCEEEEECSEEEEECEEECCHHHHTTCTTTBC
T ss_pred cCcchHHHHHHHHHHHHCCCEEEeCCEEEEEeC--Ce----EEEEecCCCceEEeeeEEEECCCCccchhHhhccccCcC
Confidence 1235788899999999999999999999964 22 44444 678999999999999998766653 5644
Q ss_pred CCC-cEEeCCCCCC-CCCCEEEeCcccccCccccCcce---eeccHHHHHHHHHHHHHHHhcccCCCc
Q 012545 302 NKG-GIETDDFFKT-SADDVYAVGDVATFPMKLYREMR---RVEHVDHARKSAEQAVKTIMATEGGKT 364 (461)
Q Consensus 302 ~~g-~i~vd~~~~t-~~~~vya~GD~~~~~~~~~~~~~---~~~~~~~A~~~g~~aa~~i~~~~~~~~ 364 (461)
++| +|.||+++|| ++|||||+|||+..+... +... ..++...|..||+.||+||...+.|++
T Consensus 270 ~~G~~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~-~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~~ 336 (430)
T 3h28_A 270 PANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIE-KTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNP 336 (430)
T ss_dssp TTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSS-CCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCEEecCccccCCCCCCEEEEEeeeccCCcc-CCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCC
Confidence 678 8999999999 999999999999876421 1110 126788999999999999998876643
No 76
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=9.9e-34 Score=279.01 Aligned_cols=303 Identities=14% Similarity=0.152 Sum_probs=206.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCC-CCCcEEEEeCCCCCC-CC-CCcccccccCCCCC---CCCCCceee--------
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGV-KPGELAIISKEAVAP-YE-RPALSKAYLFPEGT---ARLPGFHVC-------- 69 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~-~~~~V~vie~~~~~~-~~-~~~~~~~~~~~~~~---~~~~~~~~~-------- 69 (461)
+.+||+|||||++|+++|..|++.|+ + |+|||+++... |. .+.. ..++.+... ..+..+...
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~~g~~~---v~lie~~~~Gg~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 78 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKDFGITD---VIILEKGTVGHSFKHWPKS-TRTITPSFTSNGFGMPDMNAISMDTSPAF 78 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCC---EEEECSSSTTHHHHTSCTT-CBCSSCCCCCGGGTCCCTTCSSTTCCHHH
T ss_pred ccCcEEEECcCHHHHHHHHHHHHcCCCc---EEEEecCCCCCccccCccc-ccccCcchhcccCCchhhhhccccccccc
Confidence 36899999999999999999999987 5 99999986100 00 0000 000000000 000000000
Q ss_pred -cCCC------CCCCCHhHHHHcCcEEEcCCeEEEEeCCC--CEEEcCCCcEEecCEEEEccCCCccccccccccccCcc
Q 012545 70 -VGSG------GERLLPEWYKEKGIELILSTEIVRADIAS--KTLLSATGLIFKYQILVIATGSTVSITSLTSIRSKHCL 140 (461)
Q Consensus 70 -~~~~------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~--~~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~ 140 (461)
.... ....+...+++.+++++.+++|+.++.+. ..|.+.++ ++.||+||+|||+.+. |.+|+
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~-p~ip~------- 149 (369)
T 3d1c_A 79 TFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNF-PKKPF------- 149 (369)
T ss_dssp HHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTS-BCCCS-------
T ss_pred cccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCc-cCCCC-------
Confidence 0000 00112344566899999998999998764 35666666 5999999999999862 22222
Q ss_pred ccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEc
Q 012545 141 CCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVY 220 (461)
Q Consensus 141 ~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~ 220 (461)
..+++..++.+.. ..+.++|+|||+|.+|+|+|..|.+.|.+|++++
T Consensus 150 --------------------------~~~~~~~~~~~~~-------~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~ 196 (369)
T 3d1c_A 150 --------------------------KYGIHYSEIEDFD-------NFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYT 196 (369)
T ss_dssp --------------------------SSCEEGGGCSCGG-------GSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred --------------------------CceechhhcCChh-------hcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEe
Confidence 1223322221111 1256799999999999999999999999999999
Q ss_pred cCCccCCc------ccCHHHHHHHHHHHHhcC-cEEEcCCcEEEEEecCCCCEEEEEeCCCcEEe-cCEEEEccCCCCCh
Q 012545 221 PEPWCMPR------LFTADIAAFYEGYYANKG-IKIIKGTVAVGFTTNADGEVKEVKLKDGRTLE-ADIVVVGVGGRPLI 292 (461)
Q Consensus 221 ~~~~~~~~------~~~~~~~~~~~~~l~~~G-V~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~-aD~vi~a~G~~p~~ 292 (461)
+.+.+++. .+++...+.+.+.+++.| |+++++++|++++.+++ ...+++.+|+++. +|.||+|+|++|+.
T Consensus 197 ~~~~~~~~~~d~~~~~~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~--~~~v~~~~g~~~~~~d~vi~a~G~~~~~ 274 (369)
T 3d1c_A 197 STTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNG--QYHISFDSGQSVHTPHEPILATGFDATK 274 (369)
T ss_dssp C----------CTTSCCHHHHHHHHHHHHTTCCEEEECSCCEEEEEEETT--EEEEEESSSCCEEESSCCEECCCBCGGG
T ss_pred cCCCCCCCCCCCCccCCHHHHHHHHHHHhhCCcEEEecCcEEEEEEecCC--ceEEEecCCeEeccCCceEEeeccCCcc
Confidence 99887642 146778889999999997 99999999999975222 2467888998775 59999999999999
Q ss_pred hhhhc-ccccCCCcEEeCCC-CCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhccc
Q 012545 293 SLFKG-QVAENKGGIETDDF-FKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATE 360 (461)
Q Consensus 293 ~~~~~-~~~~~~g~i~vd~~-~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 360 (461)
+++.. .+..++|++.||++ ++|+.|+|||+|||+..+.... ..+..|..||+.+|++|.+..
T Consensus 275 ~~~~~~~~~~~~g~i~v~~~~~~t~~~~v~a~GD~~~~~~~~~------~~~~~~~~~a~~~a~~l~~~~ 338 (369)
T 3d1c_A 275 NPIVQQLFVTTNQDIKLTTHDESTRYPNIFMIGATVENDNAKL------CYIYKFRARFAVLAHLLTQRE 338 (369)
T ss_dssp SHHHHHHSCCTTSCCCBCTTSBBSSSTTEEECSTTCCCSSCCC------CSHHHHGGGHHHHHHHHHHHT
T ss_pred chhhhhhccCCCCCEEechhhcccCCCCeEEeccccccCCeeE------EEEehhhHHHHHHHHHHhccc
Confidence 65543 44446788999976 6789999999999998765422 345677889999999998765
No 77
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=100.00 E-value=4.4e-33 Score=280.56 Aligned_cols=288 Identities=20% Similarity=0.233 Sum_probs=202.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHH
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (461)
..+||+|||||+||++||..|++.|++ |+|||+.+.... .+.+ .+|.+.. .........++++
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~---V~v~e~~~~~GG-------~l~~-----gip~~~~--~~~~~~~~~~~l~ 183 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYE---VHVYDRYDRMGG-------LLVY-----GIPGFKL--EKSVVERRVKLLA 183 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCC---EEEECSSSSCST-------HHHH-----TSCTTTS--CHHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCe---EEEEeccCCCCC-------eeee-----cCCCccC--CHHHHHHHHHHHH
Confidence 358999999999999999999999987 999999864321 1111 0111110 0000123456678
Q ss_pred HcCcEEEcCCeEEEEeCCCCEEEcCCCcEEecCEEEEccCCCccccccccccccCccccccccCCcccccccccCCCCCC
Q 012545 84 EKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVEG 163 (461)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g 163 (461)
+.|++++.++.+. +.+.+++.. +.||+||+|||+.+. +.++ ++|
T Consensus 184 ~~gv~~~~~~~v~------~~v~~~~~~-~~~d~vvlAtG~~~~--------------------------~~~~---ipG 227 (456)
T 2vdc_G 184 DAGVIYHPNFEVG------RDASLPELR-RKHVAVLVATGVYKA--------------------------RDIK---APG 227 (456)
T ss_dssp HTTCEEETTCCBT------TTBCHHHHH-SSCSEEEECCCCCEE--------------------------CCTT---CSC
T ss_pred HCCcEEEeCCEec------cEEEhhHhH-hhCCEEEEecCCCCC--------------------------CCCC---CCC
Confidence 8999999986542 233333333 679999999999630 2222 566
Q ss_pred CCCCCEEEeCCHHHHHHHH---HH-------HHhcCCCcEEEECCCHHHHHHHHHHHHCCC-cEEEEccCCcc-CCcccC
Q 012545 164 ADAKNIFYLREIDDADKLV---EA-------IKAKKNGKAVVVGGGYIGLELSAALKINNI-DVSMVYPEPWC-MPRLFT 231 (461)
Q Consensus 164 ~~~~~v~~~~~~~~~~~l~---~~-------l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~-~Vtli~~~~~~-~~~~~~ 231 (461)
.+.+++++..++....... +. .....+++|+|||+|++|+|+|..+.+.|. +|++++|.+.. ++. .+
T Consensus 228 ~~~~gv~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~-~~ 306 (456)
T 2vdc_G 228 SGLGNIVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPG-SQ 306 (456)
T ss_dssp CTTTTEEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCSS-CH
T ss_pred CcCCCcEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCCC-CH
Confidence 6667777644332221111 00 011357899999999999999999999998 49999998875 554 33
Q ss_pred HHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEe---------C---------CC--cEEecCEEEEccCCCCC
Q 012545 232 ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKL---------K---------DG--RTLEADIVVVGVGGRPL 291 (461)
Q Consensus 232 ~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~---------~---------~G--~~i~aD~vi~a~G~~p~ 291 (461)
.+ .+.+++.||++++++.++++.. ++++..+++ . +| .++++|.||+|+|++|+
T Consensus 307 ~e-----~~~~~~~Gv~~~~~~~~~~i~~--~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~ 379 (456)
T 2vdc_G 307 RE-----VAHAEEEGVEFIWQAAPEGFTG--DTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPE 379 (456)
T ss_dssp HH-----HHHHHHTTCEEECCSSSCCEEE--EEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECC
T ss_pred HH-----HHHHHHCCCEEEeCCCceEEeC--CCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCC
Confidence 32 2457788999999999998875 343322222 1 23 47999999999999998
Q ss_pred hh--hhh-ccccc-CCCcEEeCCC-CCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCC
Q 012545 292 IS--LFK-GQVAE-NKGGIETDDF-FKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGG 362 (461)
Q Consensus 292 ~~--~~~-~~~~~-~~g~i~vd~~-~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 362 (461)
.. ++. .++.. .+|+|.||++ +||+.|+|||+|||+..+ .++..|..+|+.||.+|...+.+
T Consensus 380 ~~~~~l~~~gl~~~~~G~i~vd~~~~~Ts~~~VfA~GD~~~g~----------~~v~~A~~~G~~aA~~i~~~L~~ 445 (456)
T 2vdc_G 380 DLPNAFDEPELKVTRWGTLLVDHRTKMTNMDGVFAAGDIVRGA----------SLVVWAIRDGRDAAEGIHAYAKA 445 (456)
T ss_dssp CHHHHHHSTTSCBCTTSSBCCCTTTCBCSSTTEEECGGGGSSC----------CSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhcccCCeeECCCCCEEECCCCCcCCCCCEEEeccccCCc----------hHHHHHHHHHHHHHHHHHHHhhc
Confidence 75 454 45655 5789999997 999999999999999865 46889999999999999876543
No 78
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.98 E-value=5.4e-32 Score=297.67 Aligned_cols=316 Identities=17% Similarity=0.202 Sum_probs=215.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
.+||+|||||+||++||..|++.|++ +|+|+|+++..... +.. .+|.+... ........+++++
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~--~Vtv~E~~~~~GG~-------~~~-----~ip~~~~~--~~~~~~~~~~~~~ 250 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYS--DITIFEKQEYVGGL-------STS-----EIPQFRLP--YDVVNFEIELMKD 250 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCC--CEEEEESSSSCSTH-------HHH-----TSCTTTSC--HHHHHHHHHHHHT
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCC--cEEEEeCCCCCCcc-------ccc-----cCCcccCC--HHHHHHHHHHHHH
Confidence 57999999999999999999999982 29999998643211 100 11111100 0001122466778
Q ss_pred cCcEEEcCCeEEEEeCCCCEEEcCCCcEEecCEEEEccCC-CccccccccccccCccccccccCCcccccccccCCCCCC
Q 012545 85 KGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGS-TVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVEG 163 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~liiAtG~-~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g 163 (461)
.|++++.++.+. .+.+.+.+++++.||+||||||+ .|. .++. ++|
T Consensus 251 ~gv~~~~~~~v~-----~~~v~~~~~~~~~~d~vvlAtGa~~p~---------------------------~l~~--~~G 296 (1025)
T 1gte_A 251 LGVKIICGKSLS-----ENEITLNTLKEEGYKAAFIGIGLPEPK---------------------------TDDI--FQG 296 (1025)
T ss_dssp TTCEEEESCCBS-----TTSBCHHHHHHTTCCEEEECCCCCEEC---------------------------CCGG--GTT
T ss_pred CCcEEEcccEec-----cceEEhhhcCccCCCEEEEecCCCCCC---------------------------CCCC--CCC
Confidence 899999986652 23455555555789999999999 472 2221 123
Q ss_pred CC-CCCEEEeCCHHHHHHHHHH-----HH---hcCCCcEEEECCCHHHHHHHHHHHHCCC-cEEEEccCCc-cCCcccCH
Q 012545 164 AD-AKNIFYLREIDDADKLVEA-----IK---AKKNGKAVVVGGGYIGLELSAALKINNI-DVSMVYPEPW-CMPRLFTA 232 (461)
Q Consensus 164 ~~-~~~v~~~~~~~~~~~l~~~-----l~---~~~~~~v~VvG~G~~g~e~a~~l~~~g~-~Vtli~~~~~-~~~~~~~~ 232 (461)
.+ ..++++..++......... +. ...+++|+|||+|++|+|+|..+.+.|. +||++++.+. .++. +++
T Consensus 297 ~~~~~gv~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~~-~~~ 375 (1025)
T 1gte_A 297 LTQDQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRA-VPE 375 (1025)
T ss_dssp CCTTTTEEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCCS-CHH
T ss_pred CCCCCCEEEhHHHHHHHHhhcccccccccccccccCCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCCC-CHH
Confidence 22 3567764433221111000 00 1135699999999999999999999996 8999999884 4454 455
Q ss_pred HHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeC------CC---------cEEecCEEEEccCCCCC-hhhhh
Q 012545 233 DIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK------DG---------RTLEADIVVVGVGGRPL-ISLFK 296 (461)
Q Consensus 233 ~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~------~G---------~~i~aD~vi~a~G~~p~-~~~~~ 296 (461)
++ +.+++.||++++++.++++.. +++++..+++. +| .++++|.||+|+|++|+ ..++.
T Consensus 376 e~-----~~~~~~Gv~~~~~~~~~~i~~-~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~ 449 (1025)
T 1gte_A 376 EV-----ELAKEEKCEFLPFLSPRKVIV-KGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKE 449 (1025)
T ss_dssp HH-----HHHHHTTCEEECSEEEEEEEE-ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHH
T ss_pred HH-----HHHHHcCCEEEeCCCceEEEc-cCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhh
Confidence 44 466788999999999999986 35666556543 23 36899999999999864 55554
Q ss_pred c--cccc-CCCcEEeCC-CCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccC---CCcccCCC
Q 012545 297 G--QVAE-NKGGIETDD-FFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEG---GKTVTGYD 369 (461)
Q Consensus 297 ~--~~~~-~~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~---~~~~~~~~ 369 (461)
. ++.. .+|+|.||+ ++||+.|+|||+|||+..+ ..+..|..||+.||.+|.+.+. +.....+.
T Consensus 450 ~~~gl~~~~~G~I~vd~~~~~Ts~~~VfA~GD~~~~~----------~~~~~A~~~G~~aA~~i~~~L~~~~~~~~~~~~ 519 (1025)
T 1gte_A 450 ALSPIKFNRWDLPEVDPETMQTSEPWVFAGGDIVGMA----------NTTVESVNDGKQASWYIHKYIQAQYGASVSAKP 519 (1025)
T ss_dssp HTTTSCBCTTSSBCCCTTTCBCSSTTEEECSGGGCSC----------CCHHHHHHHHHHHHHHHHHHHHHHTTCCCCSSC
T ss_pred cccCceECCCCCEEECCCCCccCCCCEEEeCCCCCCc----------hHHHHHHHHHHHHHHHHHHHHHhccCCCcccCc
Confidence 3 5666 478899997 8999999999999999865 4577899999999999986432 22223456
Q ss_pred CCCeEEE--ecCCcceEEcc
Q 012545 370 YLPYFYS--RAFDLSWQFYG 387 (461)
Q Consensus 370 ~~p~~~~--~~~~~~~~~~g 387 (461)
.+|++|+ ...+++....|
T Consensus 520 ~~p~~~~ev~~v~ls~~~~G 539 (1025)
T 1gte_A 520 ELPLFYTPVDLVDISVEMAG 539 (1025)
T ss_dssp CBCCCCCGGGGCCCCEEETT
T ss_pred Cccccccccccccceeeecc
Confidence 6788776 34455444444
No 79
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.97 E-value=1.9e-32 Score=276.64 Aligned_cols=294 Identities=14% Similarity=0.158 Sum_probs=200.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHH
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (461)
..+||+|||||+||++||..|++.| +..+|+|||+++.. |.. +.... .|.+.. .......+.++++
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g-~~~~V~vie~~~~~-gg~------~~~g~----~p~~~~--~~~~~~~~~~~~~ 70 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHH-SRAHVDIYEKQLVP-FGL------VRFGV----APDHPE--VKNVINTFTQTAR 70 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHC-SSCEEEEECSSSSS-CTH------HHHTS----CTTCGG--GGGHHHHHHHHHT
T ss_pred CCceEEEECcCHHHHHHHHHHHhcC-CCCCEEEEeCCCcC-Cce------eeccc----CCCCcc--HHHHHHHHHHHHH
Confidence 3589999999999999999999988 23459999999753 211 11000 011100 0000122345666
Q ss_pred HcCcEEEcCCeEEEEeCCCCEEEcCCCcEEecCEEEEccCCCc-cccccccccccCccccccccCCcccccccccCCCCC
Q 012545 84 EKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTV-SITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVE 162 (461)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~liiAtG~~~-~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 162 (461)
+.+++++.++.+ .+.|.+.+. ++.||+||+|||+.+ ..|. +|
T Consensus 71 ~~gv~~~~~~~v------~~~V~~~~~-~~~~d~lVlAtGs~~~~~~~------------------------------ip 113 (460)
T 1cjc_A 71 SDRCAFYGNVEV------GRDVTVQEL-QDAYHAVVLSYGAEDHQALD------------------------------IP 113 (460)
T ss_dssp STTEEEEBSCCB------TTTBCHHHH-HHHSSEEEECCCCCEECCCC------------------------------CT
T ss_pred hCCcEEEeeeEE------eeEEEeccc-eEEcCEEEEecCcCCCCCCC------------------------------CC
Confidence 789999998654 234544443 378999999999986 3222 55
Q ss_pred CCCCCCEEEeCCHHHHHHHH---HHHH-hcCCCcEEEECCCHHHHHHHHHHH--------------------HCCC-cEE
Q 012545 163 GADAKNIFYLREIDDADKLV---EAIK-AKKNGKAVVVGGGYIGLELSAALK--------------------INNI-DVS 217 (461)
Q Consensus 163 g~~~~~v~~~~~~~~~~~l~---~~l~-~~~~~~v~VvG~G~~g~e~a~~l~--------------------~~g~-~Vt 217 (461)
|.+.+++++.+++.....-. ..+. ...+++++|||+|++|+|+|..|. +.+. +|+
T Consensus 114 G~~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~ 193 (460)
T 1cjc_A 114 GEELPGVFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVW 193 (460)
T ss_dssp TTTSTTEEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEE
T ss_pred CCCCCcEEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEE
Confidence 65566777655442110000 0000 114789999999999999999998 5676 799
Q ss_pred EEccCCccC--------------Cc--------cc----------CH---HHHHHHHHHHHh--------------cCcE
Q 012545 218 MVYPEPWCM--------------PR--------LF----------TA---DIAAFYEGYYAN--------------KGIK 248 (461)
Q Consensus 218 li~~~~~~~--------------~~--------~~----------~~---~~~~~~~~~l~~--------------~GV~ 248 (461)
++.|.+.+. +. .+ +. .+.+.+.+.+++ .||+
T Consensus 194 lv~r~~~~~~~ft~~el~~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~ 273 (460)
T 1cjc_A 194 IVGRRGPLQVAFTIKELREMIQLPGTRPMLDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVEEAARRASASRAWG 273 (460)
T ss_dssp EECSSCGGGCCCCHHHHHHHHTCTTEEEECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEE
T ss_pred EEEcCChHhhccCHHHHHHhhcCCCceeEechhhhcchhhhhhhccHHHHHHHHHHHHHHHhccccccccCCCCCCceEE
Confidence 999988652 21 00 11 023444455555 8999
Q ss_pred EEcCCcEEEEEecCCC-CEEEEEeC---------------CC--cEEecCEEEEccCCCCChhhhhccc-cc-CCCcEEe
Q 012545 249 IIKGTVAVGFTTNADG-EVKEVKLK---------------DG--RTLEADIVVVGVGGRPLISLFKGQV-AE-NKGGIET 308 (461)
Q Consensus 249 v~~~~~v~~i~~~~~g-~~~~v~~~---------------~G--~~i~aD~vi~a~G~~p~~~~~~~~~-~~-~~g~i~v 308 (461)
+++++.++++..++++ ++..|++. +| ++++||.||+|+|++|+. + .++ .. ++|+|.|
T Consensus 274 ~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~-l--~gl~~~d~~g~i~v 350 (460)
T 1cjc_A 274 LRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRP-I--DPSVPFDPKLGVVP 350 (460)
T ss_dssp EECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCC-C--CTTSCCBTTTTBCC
T ss_pred EECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCC-C--CCCcccccCCCeeE
Confidence 9999999999874335 66556553 34 579999999999999998 3 455 55 5689999
Q ss_pred CCCCCCC-CCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhccc
Q 012545 309 DDFFKTS-ADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATE 360 (461)
Q Consensus 309 d~~~~t~-~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 360 (461)
|+++||+ .|+|||+|||+..+. ..+..|..+|+.+|.+|++..
T Consensus 351 n~~~rt~~~p~vya~Gd~~~g~~---------~~i~~a~~~g~~aa~~i~~~l 394 (460)
T 1cjc_A 351 NMEGRVVDVPGLYCSGWVKRGPT---------GVITTTMTDSFLTGQILLQDL 394 (460)
T ss_dssp EETTEETTCTTEEECTHHHHCTT---------CCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcCcCCCCEEEEEeCCcCCC---------ccHHHHHHHHHHHHHHHHHHH
Confidence 9999998 799999999997653 346789999999999998765
No 80
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.97 E-value=6.8e-32 Score=294.93 Aligned_cols=284 Identities=16% Similarity=0.221 Sum_probs=205.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
.+||||||||+||++||..|++.|++ |+|||+++... ..++.. ....+++... ........+.+.+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~---V~lie~~~~~G-------G~~~~~-~k~~i~~~~~---~~~~~~~~~~l~~ 193 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGAR---VMLLDERAEAG-------GTLLDT-AGEQIDGMDS---SAWIEQVTSELAE 193 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSS-------GGGGGS-SCCEETTEEH---HHHHHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCc---EEEEeCCCCCC-------ceeccC-CccccCCCCH---HHHHHHHHHHHhh
Confidence 57999999999999999999999987 99999986532 111100 0000111000 0000111223344
Q ss_pred -cCcEEEcCCeEEEEeCCCCEEE---------c--------CCCcEEecCEEEEccCCCccccccccccccCcccccccc
Q 012545 85 -KGIELILSTEIVRADIASKTLL---------S--------ATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLR 146 (461)
Q Consensus 85 -~~v~~~~~~~v~~i~~~~~~v~---------~--------~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~ 146 (461)
.+++++.+++|..++....... + .++.++.||+||||||+.|..
T Consensus 194 ~~~v~~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~------------------ 255 (965)
T 2gag_A 194 AEETTHLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERP------------------ 255 (965)
T ss_dssp STTEEEESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECC------------------
T ss_pred cCCcEEEeCCEEEeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCC------------------
Confidence 4899999989998876543211 1 112368999999999999833
Q ss_pred CCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccC
Q 012545 147 TLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM 226 (461)
Q Consensus 147 ~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~ 226 (461)
++ +||.+.+++++..++.+ +.+.....++++++|||+|++|+|+|..|.+.|.+|+++++.+.++
T Consensus 256 ---------~~---ipG~~~~gv~~~~~~~~---~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~ 320 (965)
T 2gag_A 256 ---------IV---FENNDRPGIMLAGAVRS---YLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS 320 (965)
T ss_dssp ---------CC---CBTCCSTTEEEHHHHHH---HHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC
T ss_pred ---------CC---CCCCCCCCEEEhHHHHH---HHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc
Confidence 33 56666677887654432 2222222356899999999999999999999999999999988764
Q ss_pred CcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCC-------C--cEEecCEEEEccCCCCChhhhhc
Q 012545 227 PRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKD-------G--RTLEADIVVVGVGGRPLISLFKG 297 (461)
Q Consensus 227 ~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~-------G--~~i~aD~vi~a~G~~p~~~~~~~ 297 (461)
+ . .+.+++.||++++++.++++..++++++..|++.+ | +++++|.|++++|++|+++++..
T Consensus 321 ~-----~-----~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~ 390 (965)
T 2gag_A 321 A-----A-----AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQ 390 (965)
T ss_dssp H-----H-----HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHHHHH
T ss_pred h-----h-----HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcChHHHHh
Confidence 2 1 46788999999999999999863245555676654 5 67999999999999999987753
Q ss_pred ccccCCCcEEeCCCCC-----CCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhccc
Q 012545 298 QVAENKGGIETDDFFK-----TSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATE 360 (461)
Q Consensus 298 ~~~~~~g~i~vd~~~~-----t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 360 (461)
.+++|.||++++ |+.|+|||+|||++.+. ...|..||+.||.+|.+..
T Consensus 391 ----~~g~i~vd~~~~~~v~~ts~p~IyAaGD~a~~~~-----------l~~A~~~G~~aA~~i~~~l 443 (965)
T 2gag_A 391 ----RQGKLDWDTTIHAFVPADAVANQHLAGAMTGRLD-----------TASALSTGAATGAAAATAA 443 (965)
T ss_dssp ----TTCCEEEETTTTEEEECSCCTTEEECGGGGTCCS-----------HHHHHHHHHHHHHHHHHHT
T ss_pred ----CCCcEEEcCcccccccCCCCCCEEEEEecCCchh-----------HHHHHHHHHHHHHHHHHHc
Confidence 257899999988 89999999999998742 3479999999999998754
No 81
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.97 E-value=8.7e-31 Score=265.33 Aligned_cols=288 Identities=14% Similarity=0.153 Sum_probs=196.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHH---cCCCCCcEEEEeCCCCCC----CCC-C-cc-----cccccCCC-------CCCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAK---QGVKPGELAIISKEAVAP----YER-P-AL-----SKAYLFPE-------GTARL 63 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~---~g~~~~~V~vie~~~~~~----~~~-~-~~-----~~~~~~~~-------~~~~~ 63 (461)
.+||+|||||+||++||..|++ .|++..+|+|||+++... |.. + +. ....++.. ....+
T Consensus 2 ~~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~ 81 (464)
T 2xve_A 2 ATRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEF 81 (464)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCB
T ss_pred CCcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhccc
Confidence 3799999999999999999999 886534599999986432 110 0 00 00000000 00001
Q ss_pred CCceeecC-----C------CCCCCCHhHHHHcCcE--EEcCCeEEEEeCCCC----EEEcCC---C--cEEecCEEEEc
Q 012545 64 PGFHVCVG-----S------GGERLLPEWYKEKGIE--LILSTEIVRADIASK----TLLSAT---G--LIFKYQILVIA 121 (461)
Q Consensus 64 ~~~~~~~~-----~------~~~~~~~~~~~~~~v~--~~~~~~v~~i~~~~~----~v~~~~---~--~~~~~d~liiA 121 (461)
+++..... . .....+.+.+++.+++ +.++++|..++.... .|.+.+ + .++.||+||+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvA 161 (464)
T 2xve_A 82 ADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCC 161 (464)
T ss_dssp TTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEEC
T ss_pred CCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEEC
Confidence 11110000 0 0001123344556887 888989999986554 566543 3 56899999999
Q ss_pred cC--CCccccccccccccCccccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCC
Q 012545 122 TG--STVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGG 199 (461)
Q Consensus 122 tG--~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G 199 (461)
|| +.|.+|++||+.. ++ ..+++..++.+... ..+++|+|||+|
T Consensus 162 tG~~s~p~~p~ipG~~~------------------------~~----g~~~hs~~~~~~~~-------~~~k~VvVVG~G 206 (464)
T 2xve_A 162 TGHFSTPYVPEFEGFEK------------------------FG----GRILHAHDFRDALE-------FKDKTVLLVGSS 206 (464)
T ss_dssp CCSSSSBCCCCCBTTTT------------------------CC----SEEEEGGGCCCGGG-------GTTSEEEEECCS
T ss_pred CCCCCCCccCCCCCccc------------------------CC----ceEEehhhhCCHhH-------cCCCEEEEEcCC
Confidence 99 8898887777642 11 11333322222111 158999999999
Q ss_pred HHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEec
Q 012545 200 YIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEA 279 (461)
Q Consensus 200 ~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~a 279 (461)
++|+|+|..|++.|.+|+++.+.+.+++..+ ..||+++ ..|++++. + .|+++||+++++
T Consensus 207 ~sg~eiA~~l~~~g~~V~li~~~~~~~~~~~-------------~~~V~~~--~~V~~i~~--~----~V~~~dG~~i~~ 265 (464)
T 2xve_A 207 YSAEDIGSQCYKYGAKKLISCYRTAPMGYKW-------------PENWDER--PNLVRVDT--E----NAYFADGSSEKV 265 (464)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSSCCCCCCC-------------CTTEEEC--SCEEEECS--S----EEEETTSCEEEC
T ss_pred CCHHHHHHHHHHhCCeEEEEEECCCCCCCCC-------------CCceEEc--CCeEEEeC--C----EEEECCCCEEeC
Confidence 9999999999999999999999888766422 2478887 67888853 2 578899999999
Q ss_pred CEEEEccCCCCChhhhhc--ccccCCC-cEEeCCC---CCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHH
Q 012545 280 DIVVVGVGGRPLISLFKG--QVAENKG-GIETDDF---FKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAV 353 (461)
Q Consensus 280 D~vi~a~G~~p~~~~~~~--~~~~~~g-~i~vd~~---~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa 353 (461)
|.||+|+|++|+.+++.. ++..+++ ++ ++.+ ++|+.|+|||+|||+.. ..+..|..||+.+|
T Consensus 266 D~Vi~atG~~p~~~~l~~~~gl~~~~~~~v-~~~~~~~~~t~~p~i~aiGd~~~~-----------~~~~~a~~qa~~~a 333 (464)
T 2xve_A 266 DAIILCTGYIHHFPFLNDDLRLVTNNRLWP-LNLYKGVVWEDNPKFFYIGMQDQW-----------YSFNMFDAQAWYAR 333 (464)
T ss_dssp SEEEECCCBCCCCTTBCTTTCCCCCSSSCC-SSEETTTEESSSTTEEECSCSCCS-----------SCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCCcCcccccccCCCccc-ccccceEecCCCCCEEEEeCcccc-----------cchHHHHHHHHHHH
Confidence 999999999999998864 3444444 54 4433 56899999999998864 34678889999999
Q ss_pred HHHhccc
Q 012545 354 KTIMATE 360 (461)
Q Consensus 354 ~~i~~~~ 360 (461)
+++.+..
T Consensus 334 ~~l~G~~ 340 (464)
T 2xve_A 334 DVIMGRL 340 (464)
T ss_dssp HHHTTSS
T ss_pred HHHcCCC
Confidence 9998754
No 82
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.97 E-value=3.5e-32 Score=274.31 Aligned_cols=290 Identities=16% Similarity=0.197 Sum_probs=197.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHH-c------CCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCC
Q 012545 4 KSFKYVILGGGVSAGYAAREFAK-Q------GVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGER 76 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~-~------g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (461)
..+||+|||||+||++||..|++ . +.+ |+|||+.+. +|..+ .+.. .|.... ..+...
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~---V~lie~~~~-~gg~~------~~gv----~p~~~~--~~~~~~ 65 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMA---VDMLEMLPT-PWGLV------RSGV----APDHPK--IKSISK 65 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEE---EEEEESSSS-CSTHH------HHTS----CTTCTG--GGGGHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCe---EEEEecCCC-CCCcc------cccc----CCCCCC--HHHHHH
Confidence 46899999999999999999999 7 665 999999865 22211 0000 011000 001112
Q ss_pred CCHhHHHHcCcEEEcCCeEEEEeCCCCEEEcCCCcEEecCEEEEccCCC-ccccccccccccCccccccccCCccccccc
Q 012545 77 LLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGST-VSITSLTSIRSKHCLCCFFLRTLPLFQVLR 155 (461)
Q Consensus 77 ~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~liiAtG~~-~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~ 155 (461)
.+.+++++.+++++.+..+ .+.|.+.+++ +.||+||+|||+. +..|.
T Consensus 66 ~~~~~~~~~~v~~~~~v~v------~~~v~~~~~~-~~~d~lViAtG~~~~~~~~------------------------- 113 (456)
T 1lqt_A 66 QFEKTAEDPRFRFFGNVVV------GEHVQPGELS-ERYDAVIYAVGAQSDRMLN------------------------- 113 (456)
T ss_dssp HHHHHHTSTTEEEEESCCB------TTTBCHHHHH-HHSSEEEECCCCCEECCCC-------------------------
T ss_pred HHHHHHhcCCCEEEeeEEE------CCEEEECCCe-EeCCEEEEeeCCCCCCCCC-------------------------
Confidence 3345566789999887542 2445555553 7999999999997 53222
Q ss_pred ccCCCCCCCCCCCEEEeCCHHHHHHH-H---HHHHhcCCCcEEEECCCHHHHHHHHHHHHC-------------------
Q 012545 156 LTDFGVEGADAKNIFYLREIDDADKL-V---EAIKAKKNGKAVVVGGGYIGLELSAALKIN------------------- 212 (461)
Q Consensus 156 ~~~~~~~g~~~~~v~~~~~~~~~~~l-~---~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~------------------- 212 (461)
+||.+.+++++..++.....- . ..+....+++++|||+|++|+|+|..|.+.
T Consensus 114 -----ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~ 188 (456)
T 1lqt_A 114 -----IPGEDLPGSIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRP 188 (456)
T ss_dssp -----CTTTTSTTEEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTT
T ss_pred -----CCCCCCCCcEEHHHHHhhhhcCcccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHH
Confidence 555555667765443211000 0 011112478999999999999999999874
Q ss_pred -C-CcEEEEccCCccCCcccCH------------------H------------------HHHHHHHHHHh------cCcE
Q 012545 213 -N-IDVSMVYPEPWCMPRLFTA------------------D------------------IAAFYEGYYAN------KGIK 248 (461)
Q Consensus 213 -g-~~Vtli~~~~~~~~~~~~~------------------~------------------~~~~~~~~l~~------~GV~ 248 (461)
+ .+|+++.|.+.+...+..+ + +.+.+.+.+++ .||+
T Consensus 189 ~g~~~V~lv~r~~~~~~~f~~~elrel~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~ 268 (456)
T 1lqt_A 189 RGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMV 268 (456)
T ss_dssp CCCCEEEEECSSCGGGCCCCHHHHHHGGGCTTEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEE
T ss_pred CCCcEEEEEecCChhhhccChHHHHHhhcCCCceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEE
Confidence 5 4899999988765431111 1 12344455555 7999
Q ss_pred EEcCCcEEEEEecCCCCEEEEEeC----------------CC--cEEecCEEEEccCCCCChhhhhccccc-CCCcEEeC
Q 012545 249 IIKGTVAVGFTTNADGEVKEVKLK----------------DG--RTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETD 309 (461)
Q Consensus 249 v~~~~~v~~i~~~~~g~~~~v~~~----------------~G--~~i~aD~vi~a~G~~p~~~~~~~~~~~-~~g~i~vd 309 (461)
+++++.++++.. ++.+..|++. +| ++++||.||+|+|++|+. + .++.. ++|+|.||
T Consensus 269 i~~~~~~~~i~~--~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~-l--~gl~~d~~g~i~vn 343 (456)
T 1lqt_A 269 FRFLTSPIEIKG--KRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVP-T--PGLPFDDQSGTIPN 343 (456)
T ss_dssp EECSEEEEEEEC--SSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEECCC-C--TTSCCBTTTTBCCE
T ss_pred EEeCCCCeEEec--CCcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccccccCC-C--CCCcccCCCCeeEC
Confidence 999999999986 3444345443 34 469999999999999998 3 34555 57889999
Q ss_pred CCCC-CCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhccc
Q 012545 310 DFFK-TSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATE 360 (461)
Q Consensus 310 ~~~~-t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 360 (461)
+++| |+.|+|||+|||+..+. ..+..|..+|+.+|.+|++..
T Consensus 344 ~~~rvt~~pgvya~GD~~~gp~---------~~i~~a~~~g~~~a~~i~~~l 386 (456)
T 1lqt_A 344 VGGRINGSPNEYVVGWIKRGPT---------GVIGTNKKDAQDTVDTLIKNL 386 (456)
T ss_dssp ETTEETTCSSEEECTHHHHCSC---------SCTTHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCCCCCEEEEeccCCCCc---------hhHHHHHHHHHHHHHHHHHHH
Confidence 9999 79999999999997653 234568899999999998654
No 83
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.97 E-value=9.1e-31 Score=265.86 Aligned_cols=312 Identities=15% Similarity=0.074 Sum_probs=193.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcC-----CCCCcEEEEeCCCCCCCCCCccc-ccccCCCCCCC-----CCCceeec---
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQG-----VKPGELAIISKEAVAPYERPALS-KAYLFPEGTAR-----LPGFHVCV--- 70 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g-----~~~~~V~vie~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~--- 70 (461)
.+||+|||||++|+++|..|++.| .+ |+|||+++...|....+. ...+......+ .|.....+
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~---v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~ 106 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALE---VLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNY 106 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCC---EEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCccc---EEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHh
Confidence 469999999999999999999998 66 999999987665432110 00000000000 00000000
Q ss_pred --CC----------CC-------CCCCHhHHHHcCcEEEcCCeEEEEeCC---CC----EEEcCCCc----EEecCEEEE
Q 012545 71 --GS----------GG-------ERLLPEWYKEKGIELILSTEIVRADIA---SK----TLLSATGL----IFKYQILVI 120 (461)
Q Consensus 71 --~~----------~~-------~~~~~~~~~~~~v~~~~~~~v~~i~~~---~~----~v~~~~~~----~~~~d~lii 120 (461)
.. .. ..++....++.++++.++++|+.++.+ .+ .|.+.++. ++.||+||+
T Consensus 107 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVl 186 (463)
T 3s5w_A 107 LHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVV 186 (463)
T ss_dssp HHHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEE
T ss_pred hhhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEE
Confidence 00 00 001112223457889999899999875 43 45555654 799999999
Q ss_pred ccCCCccccccccccccCccccccccCCcccccccccCCCCCCCCCC-CEEEeCCHHH-HHHHHHHHHhcCCCcEEEECC
Q 012545 121 ATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVEGADAK-NIFYLREIDD-ADKLVEAIKAKKNGKAVVVGG 198 (461)
Q Consensus 121 AtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~-~v~~~~~~~~-~~~l~~~l~~~~~~~v~VvG~ 198 (461)
|||+.|.+|.. +++.... .+++...+.+ ...+.... ..+++|+|||+
T Consensus 187 AtG~~p~~p~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~vvVvGg 235 (463)
T 3s5w_A 187 SPGGTPRIPQV-----------------------------FRALKGDGRVFHHSQYLEHMAKQPCSS--GKPMKIAIIGG 235 (463)
T ss_dssp CCCCEECCCGG-----------------------------GGGGTTCTTEEEGGGHHHHHCC---------CEEEEEECC
T ss_pred CCCCCCCCcch-----------------------------hhhcCCCCcEEECHHHHhhHHHhhhcc--cCCCeEEEECC
Confidence 99998854431 1111122 4555544332 22221111 14789999999
Q ss_pred CHHHHHHHHHHHHC--CCcEEEEccCCccCCcc-------------------cCHHHHHHHHHHHHh-------------
Q 012545 199 GYIGLELSAALKIN--NIDVSMVYPEPWCMPRL-------------------FTADIAAFYEGYYAN------------- 244 (461)
Q Consensus 199 G~~g~e~a~~l~~~--g~~Vtli~~~~~~~~~~-------------------~~~~~~~~~~~~l~~------------- 244 (461)
|.+|+|+|..|.+. +.+|+++.|.+.+++.. ++++....+.+.+..
T Consensus 236 G~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (463)
T 3s5w_A 236 GQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIER 315 (463)
T ss_dssp SHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHH
T ss_pred CHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHH
Confidence 99999999999998 89999999998775521 122222233232222
Q ss_pred -------------cCcEEEcCCcEEEEEecCCCCEEEEEeC---CCc--EEecCEEEEccCCCCC--hhhhhcccccCCC
Q 012545 245 -------------KGIKIIKGTVAVGFTTNADGEVKEVKLK---DGR--TLEADIVVVGVGGRPL--ISLFKGQVAENKG 304 (461)
Q Consensus 245 -------------~GV~v~~~~~v~~i~~~~~g~~~~v~~~---~G~--~i~aD~vi~a~G~~p~--~~~~~~~~~~~~g 304 (461)
.||+++++++|+++..++++ ..+++. +|+ ++++|.||+|+|++|+ .+++....... |
T Consensus 316 ~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~--~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~l~~l~~~~-g 392 (463)
T 3s5w_A 316 IYGVFYRQKVSGIPRHAFRCMTTVERATATAQG--IELALRDAGSGELSVETYDAVILATGYERQLHRQLLEPLAEYL-G 392 (463)
T ss_dssp HHHHHHHHHHHCCCCSEEETTEEEEEEEEETTE--EEEEEEETTTCCEEEEEESEEEECCCEECCC-CTTTGGGGGGB-C
T ss_pred HHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCE--EEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccchhHHHHHHh-C
Confidence 69999999999999873332 456665 675 4999999999999999 45543221112 8
Q ss_pred cEEeCCCCCCC-----CCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhc
Q 012545 305 GIETDDFFKTS-----ADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMA 358 (461)
Q Consensus 305 ~i~vd~~~~t~-----~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~ 358 (461)
++.||+++|+. .|+|||+|||........ ......|.+++.+++..+-.
T Consensus 393 ~i~v~~~~~~~~~~~~~~~Ifa~G~~~~~~g~~~-----~~l~~~a~r~~~i~~~~~~~ 446 (463)
T 3s5w_A 393 DHEIGRDYRLQTDERCKVAIYAQGFSQASHGLSD-----TLLSVLPVRAEEISGSLYQH 446 (463)
T ss_dssp --CCCTTSBCCBCTTBCSEEEESSCCHHHHCTTT-----TSSTTHHHHHHHHHHHHHHH
T ss_pred CcccCcccccccCCCCCCeEEEcCCCcccCCcCc-----cchhHHHHHHHHHHHHHHhh
Confidence 99999999973 567999999986433210 02344566777766555443
No 84
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.97 E-value=2.5e-30 Score=261.22 Aligned_cols=293 Identities=12% Similarity=0.080 Sum_probs=192.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCC--CCCC-cccc--------------cccC--------C
Q 012545 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP--YERP-ALSK--------------AYLF--------P 57 (461)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~--~~~~-~~~~--------------~~~~--------~ 57 (461)
++.+||+|||||++|+++|..|++.|. ..+|+|+|+.+... |... .... .+.. .
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~-~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~ 82 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKA-FDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPS 82 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTC-CSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCC
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCC-CCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccC
Confidence 457999999999999999999999987 12399999985421 1110 0000 0000 0
Q ss_pred CCCC-----------CCCCceeecCCCC-------CCCCHhHHHHcCcEEEcCCeEEEEeCCCC--EEEcCC---Cc---
Q 012545 58 EGTA-----------RLPGFHVCVGSGG-------ERLLPEWYKEKGIELILSTEIVRADIASK--TLLSAT---GL--- 111 (461)
Q Consensus 58 ~~~~-----------~~~~~~~~~~~~~-------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~---~~--- 111 (461)
.... .++++........ ..++.+..++.+..++++++|+.++.... .|.+.+ |+
T Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~ 162 (447)
T 2gv8_A 83 PLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPIS 162 (447)
T ss_dssp CCCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEE
T ss_pred chhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeE
Confidence 0000 0000000000000 00112233345667888999999986654 455544 55
Q ss_pred EEecCEEEEccCC--CccccccccccccCccccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcC
Q 012545 112 IFKYQILVIATGS--TVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKK 189 (461)
Q Consensus 112 ~~~~d~liiAtG~--~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~ 189 (461)
++.||+||+|||. .|.+|++||+.++. +.....++++.++.+...+ .
T Consensus 163 ~~~~d~VVvAtG~~s~p~~p~i~G~~~~~------------------------~~~~g~v~~~~~~~~~~~~-------~ 211 (447)
T 2gv8_A 163 KDIFDAVSICNGHYEVPYIPNIKGLDEYA------------------------KAVPGSVLHSSLFREPELF-------V 211 (447)
T ss_dssp EEEESEEEECCCSSSSBCBCCCBTHHHHH------------------------HHSTTSEEEGGGCCCGGGG-------T
T ss_pred EEEeCEEEECCCCCCCCCCCCCCChhhhh------------------------ccCCccEEEecccCChhhc-------C
Confidence 7999999999998 78888888864200 0001224444333222221 5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCc-EEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEE
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNID-VSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKE 268 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~-Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~ 268 (461)
+++|+|||+|++|+|+|..|++.+.+ |+++.+.+.+ +++.||.+ ...|+++.. ++. .
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~----------------l~~~~i~~--~~~v~~~~~--~~~--~ 269 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD----------------IQNESLQQ--VPEITKFDP--TTR--E 269 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS----------------CBCSSEEE--ECCEEEEET--TTT--E
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc----------------CCCCCeEE--ecCeEEEec--CCC--E
Confidence 79999999999999999999999999 9999998765 34457764 567888864 222 6
Q ss_pred EEeCCCcE-EecCEEEEccCCCCChhh-----hhcc-ccc-CCCcEEeCCCCC---CCCCCEEEeCcccccCccccCcce
Q 012545 269 VKLKDGRT-LEADIVVVGVGGRPLISL-----FKGQ-VAE-NKGGIETDDFFK---TSADDVYAVGDVATFPMKLYREMR 337 (461)
Q Consensus 269 v~~~~G~~-i~aD~vi~a~G~~p~~~~-----~~~~-~~~-~~g~i~vd~~~~---t~~~~vya~GD~~~~~~~~~~~~~ 337 (461)
|+++||++ +++|.||+|+|++|++++ ++.. ... .++.+.++.+.+ +++|+||++||+....
T Consensus 270 v~~~dG~~~~~~D~vi~atG~~~~~~~l~~~~l~~~~~~i~~~~~~~~~~~~~v~~~~~p~l~~~G~~~~~~-------- 341 (447)
T 2gv8_A 270 IYLKGGKVLSNIDRVIYCTGYLYSVPFPSLAKLKSPETKLIDDGSHVHNVYQHIFYIPDPTLAFVGLALHVV-------- 341 (447)
T ss_dssp EEETTTEEECCCSEEEECCCBCCCCCCHHHHSCCSTTTCCCSSSSSCCSEETTTEETTCTTEEESSCCBSSC--------
T ss_pred EEECCCCEeccCCEEEECCCCCcCCCCCcccccccccCceecCCCcccccccccccCCCCcEEEEecccccc--------
Confidence 88899976 799999999999999988 5431 111 234455555555 6899999999998652
Q ss_pred eeccHHHHHHHHHHHHHHHhccc
Q 012545 338 RVEHVDHARKSAEQAVKTIMATE 360 (461)
Q Consensus 338 ~~~~~~~A~~~g~~aa~~i~~~~ 360 (461)
.+..|..||+.+|+++.+..
T Consensus 342 ---~~~~a~~qa~~~a~~~~g~~ 361 (447)
T 2gv8_A 342 ---PFPTSQAQAAFLARVWSGRL 361 (447)
T ss_dssp ---HHHHHHHHHHHHHHHHTTSS
T ss_pred ---CchHHHHHHHHHHHHHcCCC
Confidence 46778899999999998753
No 85
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.97 E-value=1.7e-30 Score=265.12 Aligned_cols=257 Identities=16% Similarity=0.107 Sum_probs=188.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHH
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (461)
..+||+|||||+||++||.+|++. ++ |+|+|+++...+.....+... ..++. ........+.
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~---V~vie~~~~~GG~~~~~~~~~------~g~~~--------~~~~~~~~l~ 168 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LT---VALIEERGWLGGDMWLKGIKQ------EGFNK--------DSRKVVEELV 168 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CC---EEEECTTSSSSCSGGGTCSEE------TTTTE--------EHHHHHHHHH
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CC---EEEEeCCCCCCCeeecccccc------CCCCC--------CHHHHHHHHH
Confidence 357999999999999999999998 65 999999976543321111000 00110 0001111211
Q ss_pred ---HcCcEEEcCCeEEEEeCCCCEEEc---CCCc--EEecCEEEEccCCCccccccccccccCccccccccCCccccccc
Q 012545 84 ---EKGIELILSTEIVRADIASKTLLS---ATGL--IFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLR 155 (461)
Q Consensus 84 ---~~~v~~~~~~~v~~i~~~~~~v~~---~~~~--~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~ 155 (461)
+.+++++.++.+..++.+.+.+.+ .+++ ++.||++|+|||+.+..|
T Consensus 169 ~~l~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~-------------------------- 222 (493)
T 1y56_A 169 GKLNENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDSTM-------------------------- 222 (493)
T ss_dssp HTCCTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEECCC--------------------------
T ss_pred HHHhcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCccCC--------------------------
Confidence 458999999889888877654332 3443 689999999999998432
Q ss_pred ccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHH
Q 012545 156 LTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIA 235 (461)
Q Consensus 156 ~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~ 235 (461)
+ ++|.+.+++++.. ++..+.+.....++++++|+|+|++|+|
T Consensus 223 -~---~~g~~~~gv~~~~---~~~~~~~~~~~~~~~~vvViGgG~~gle------------------------------- 264 (493)
T 1y56_A 223 -L---FENNDMPGVFRRD---FALEVMNVWEVAPGRKVAVTGSKADEVI------------------------------- 264 (493)
T ss_dssp -C---CTTTTSTTEEEHH---HHHHHHHTSCBCSCSEEEEESTTHHHHH-------------------------------
T ss_pred -C---CCCCCCCCEEEcH---HHHHHHHhcccCCCCEEEEECCCHHHHH-------------------------------
Confidence 2 5666667787643 4444433332335689999999999988
Q ss_pred HHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChhhhhc-cccc---CCCcEE-eCC
Q 012545 236 AFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKG-QVAE---NKGGIE-TDD 310 (461)
Q Consensus 236 ~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~~~~~-~~~~---~~g~i~-vd~ 310 (461)
+.+++.||++++++.|+++.. ++.+..+.+++|+++++|.||+|+|++|+.++++. ++.. ++|+|. ||+
T Consensus 265 ----~~l~~~GV~v~~~~~v~~i~~--~~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~g~~~~~~~~g~i~~vd~ 338 (493)
T 1y56_A 265 ----QELERWGIDYVHIPNVKRVEG--NEKVERVIDMNNHEYKVDALIFADGRRPDINPITQAGGKLRFRRGYYSPVLDE 338 (493)
T ss_dssp ----HHHHHHTCEEEECSSEEEEEC--SSSCCEEEETTCCEEECSEEEECCCEEECCHHHHHTTCCEEEETTEEEECCCT
T ss_pred ----HHHHhCCcEEEeCCeeEEEec--CCceEEEEeCCCeEEEeCEEEECCCcCcCchHHHhcCCCccccCCceeecccc
Confidence 456788999999999999986 34455778899999999999999999999988753 3433 467787 899
Q ss_pred CCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhccc
Q 012545 311 FFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATE 360 (461)
Q Consensus 311 ~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 360 (461)
++| +.|+|||+|||++. ..+..|..||+.||.+|.+..
T Consensus 339 ~~~-s~~~vya~GD~~~~-----------~~~~~A~~~g~~aa~~i~~~l 376 (493)
T 1y56_A 339 YHR-IKDGIYVAGSAVSI-----------KPHYANYLEGKLVGAYILKEF 376 (493)
T ss_dssp TSE-EETTEEECSTTTCC-----------CCHHHHHHHHHHHHHHHHHHT
T ss_pred ccC-cCCCEEEEeccCCc-----------cCHHHHHHHHHHHHHHHHHHc
Confidence 999 99999999999975 357789999999999998764
No 86
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.97 E-value=2.4e-31 Score=282.08 Aligned_cols=289 Identities=18% Similarity=0.171 Sum_probs=201.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHH
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (461)
..+||+|||||+||++||..|+++|++ |+|+|+++..... +... ..+|+.... ..........+.
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~---V~liE~~~~~GG~-------~~~~---~~~p~~~~~--~~~~~~~~~~~~ 454 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYD---VVLAEAGRDLGGR-------VTQE---SALPGLSAW--GRVKEYREAVLA 454 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCE---EEEECSSSSSCTH-------HHHH---HTSTTCGGG--GHHHHHHHHHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCe---EEEEecCCCCCCE-------eeec---cCCCchhHH--HHHHHHHHHHHH
Confidence 468999999999999999999999987 9999998643311 1100 011111100 000112334445
Q ss_pred Hc-CcEEEcCCeEEEEeCCCCEEEcCCCcEEecCEEEEccCCCccccccccccccCccccccccCCcccccccccCCCCC
Q 012545 84 EK-GIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVE 162 (461)
Q Consensus 84 ~~-~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 162 (461)
+. +++++.++.+ ...+.+++.||+||+|||+.+..+.+++. ..++ ++
T Consensus 455 ~~~gv~~~~~~~v----------~~~~~~~~~~d~lvlAtG~~~~~~~~~~~-------------------~~~~---i~ 502 (690)
T 3k30_A 455 ELPNVEIYRESPM----------TGDDIVEFGFEHVITATGATWRTDGVARF-------------------HTTA---LP 502 (690)
T ss_dssp TCTTEEEESSCCC----------CHHHHHHTTCCEEEECCCEEECSSCCSSS-------------------CSSC---CC
T ss_pred HcCCCEEEECCee----------cHHHHhhcCCCEEEEcCCCcccccccccc-------------------CCCC---CC
Confidence 55 8888887543 22334457899999999999632222221 1122 55
Q ss_pred CCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEEC--CCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHH
Q 012545 163 GADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVG--GGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEG 240 (461)
Q Consensus 163 g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG--~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~ 240 (461)
|.+..++++. .+.... ....+++++||| +|++|+|+|..|.+.|.+|+++++.+.+++...++.....+.+
T Consensus 503 G~~~~~v~~~---~~~l~~----~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~~~~~~~~l~~ 575 (690)
T 3k30_A 503 IAEGMQVLGP---DDLFAG----RLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNNTFEVNRIQR 575 (690)
T ss_dssp BCTTSEEECH---HHHHTT----CCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGGGGTCHHHHHH
T ss_pred CCCCCcEEcH---HHHhCC----CCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccccchhHHHHHH
Confidence 6555555533 222111 122467899999 9999999999999999999999999988776444666788899
Q ss_pred HHHhcCcEEEcCCcEEEEEecCCCCEEEEE---eCCCcEEecCEEEEccCCCCChhhhhcccccCCCcEEeCCCCCCCCC
Q 012545 241 YYANKGIKIIKGTVAVGFTTNADGEVKEVK---LKDGRTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDFFKTSAD 317 (461)
Q Consensus 241 ~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~---~~~G~~i~aD~vi~a~G~~p~~~~~~~~~~~~~g~i~vd~~~~t~~~ 317 (461)
.|++.||+++++++|++++. ++ ..+. +.+++++++|.||+|+|++|+.+++..... .+. +|+.|
T Consensus 576 ~l~~~GV~i~~~~~V~~i~~--~~--~~v~~~~~~~~~~i~aD~VV~A~G~~p~~~l~~~l~~--~~~-------~t~~~ 642 (690)
T 3k30_A 576 RLIENGVARVTDHAVVAVGA--GG--VTVRDTYASIERELECDAVVMVTARLPREELYLDLVA--RRD-------AGEIA 642 (690)
T ss_dssp HHHHTTCEEEESEEEEEEET--TE--EEEEETTTCCEEEEECSEEEEESCEEECCHHHHHHHH--HHH-------HTSCS
T ss_pred HHHHCCCEEEcCcEEEEEEC--Ce--EEEEEccCCeEEEEECCEEEECCCCCCChHHHHHHhh--hhc-------ccCCC
Confidence 99999999999999999975 33 2333 235668999999999999999987753211 111 88999
Q ss_pred CEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCcccCCCC
Q 012545 318 DVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDY 370 (461)
Q Consensus 318 ~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~ 370 (461)
+|||+|||+.. +.+..|..||+.||.+|.+.+.+.+..+|..
T Consensus 643 ~VyaiGD~~~~-----------~~~~~A~~~g~~aa~~i~~~l~g~~~~p~~~ 684 (690)
T 3k30_A 643 SVRGIGDAWAP-----------GTIAAAVWSGRRAAEEFDAVLPSNDEVPFRR 684 (690)
T ss_dssp EEEECGGGTSC-----------BCHHHHHHHHHHHHHHTTCCCCCTTSCSSCC
T ss_pred CEEEEeCCCch-----------hhHHHHHHHHHHHHHHHHhhccCCCCCCcCh
Confidence 99999999975 3567799999999999998876655555543
No 87
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.97 E-value=2.9e-31 Score=282.60 Aligned_cols=306 Identities=15% Similarity=0.157 Sum_probs=197.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
.+||+|||||+||++||..|++.|++ |+|+|+++..... +... ..+|++.. .....++++.
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~---Vtlie~~~~~GG~-------~~~~---~~~pg~~~------~~~~~~~~~~ 449 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYT---VHLTDTAEKIGGH-------LNQV---AALPGLGE------WSYHRDYRET 449 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSTTTT-------HHHH---TTSTTCGG------GHHHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCe---EEEEeCCCCcCCe-------eeec---ccCCChHH------HHHHHHHHHH
Confidence 57999999999999999999999987 9999998653211 1110 11121110 0011111111
Q ss_pred cCcEEE--cCCeEEEEeCCCCEEEcCCCcEEecCEEEEccCCCccccccccccccCccccccccCCcccccccccCCCCC
Q 012545 85 KGIELI--LSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVE 162 (461)
Q Consensus 85 ~~v~~~--~~~~v~~i~~~~~~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 162 (461)
.++.+ .+.....+.. ++.+.+.++..+.||+||+|||+.+..+.++. | ..++ +|
T Consensus 450 -~i~~~~~~~~~~v~i~~-~~~v~~~~~~~~~~d~vviAtG~~~~~~~~~~---------------p----~~~~---ip 505 (729)
T 1o94_A 450 -QITKLLKKNKESQLALG-QKPMTADDVLQYGADKVIIATGARWNTDGTNC---------------L----THDP---IP 505 (729)
T ss_dssp -HHHHHHHHSTTCEEECS-CCCCCHHHHHTSCCSEEEECCCEEECSSCCCT---------------T----TSSC---CT
T ss_pred -HHHHhhcccCCceEEEe-CeEEehhhccccCCCEEEEcCCCCcccccccC---------------c----cCCC---CC
Confidence 01100 0011122222 23344445556899999999999852100000 0 1111 45
Q ss_pred CCC--CCCEEEeCCHHHHHHHHHHHHhcCCCcEEEEC--CCHHHHHHHHHHHHCCCcEEEEccCCccCCc-ccCHHHHHH
Q 012545 163 GAD--AKNIFYLREIDDADKLVEAIKAKKNGKAVVVG--GGYIGLELSAALKINNIDVSMVYPEPWCMPR-LFTADIAAF 237 (461)
Q Consensus 163 g~~--~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG--~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~-~~~~~~~~~ 237 (461)
|.+ ..++++. .++.. . ....+++|+||| +|++|+|+|..|++.|.+|+++++.+ +++. .++.. ...
T Consensus 506 G~~~~~~~v~~~---~~~l~--~--~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~~~~~~-~~~ 576 (729)
T 1o94_A 506 GADASLPDQLTP---EQVMD--G--KKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYMHFTLE-YPN 576 (729)
T ss_dssp TCCTTSTTEECH---HHHHH--C--CSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHHHHTTC-HHH
T ss_pred CccccCCCEEEH---HHHhc--C--CCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-cccccccccc-HHH
Confidence 554 4566643 22211 1 122467999998 99999999999999999999999988 5442 12222 467
Q ss_pred HHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCC-cE------------------EecCEEEEccCCCCChhhhhcc
Q 012545 238 YEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDG-RT------------------LEADIVVVGVGGRPLISLFKGQ 298 (461)
Q Consensus 238 ~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G-~~------------------i~aD~vi~a~G~~p~~~~~~~~ 298 (461)
+.+.|++.||+++++++++++.. ++......+.++ ++ +++|.||+|+|++|++++++..
T Consensus 577 ~~~~l~~~GV~i~~~~~v~~i~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~l~~~l 654 (729)
T 1o94_A 577 MMRRLHELHVEELGDHFCSRIEP--GRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSECTLWNEL 654 (729)
T ss_dssp HHHHHHHTTCEEECSEEEEEEET--TEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECCHHHHHH
T ss_pred HHHHHHhCCCEEEcCcEEEEEEC--CeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCChHHHHHH
Confidence 77889999999999999999974 332111111233 33 9999999999999999877532
Q ss_pred cccCCCcEEeCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcccCCCcccCCCCCCeEEEec
Q 012545 299 VAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRA 378 (461)
Q Consensus 299 ~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~ 378 (461)
.. .+|+++||+.|+|||+|||+.. ..+..|..||+.||.+|.+.. .+..+|+ ++..
T Consensus 655 -~~-----~vd~~~~t~~~~VyAiGD~~~~-----------~~~~~A~~~G~~aA~~i~~~l------~~~~~p~-~~~~ 710 (729)
T 1o94_A 655 -KA-----RESEWAENDIKGIYLIGDAEAP-----------RLIADATFTGHRVAREIEEAN------PQIAIPY-KRET 710 (729)
T ss_dssp -HH-----TGGGTGGGTCCEEEECGGGTSC-----------CCHHHHHHHHHHHHHTTTSSC------TTSCCCC-CCCC
T ss_pred -hh-----hcccccccCCCCeEEEeCccch-----------hhHHHHHHHHHHHHHHhhhhc------ccCCCCe-eeec
Confidence 11 2688999999999999999973 457789999999999998754 3455676 5666
Q ss_pred CCcceEEccC
Q 012545 379 FDLSWQFYGD 388 (461)
Q Consensus 379 ~~~~~~~~g~ 388 (461)
+++.++.+|.
T Consensus 711 ~~~~~~~~~~ 720 (729)
T 1o94_A 711 IAWGTPHMPG 720 (729)
T ss_dssp CCTTCCSSTT
T ss_pred ccCcccccCC
Confidence 7776665553
No 88
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.95 E-value=2.5e-28 Score=250.97 Aligned_cols=299 Identities=16% Similarity=0.212 Sum_probs=191.5
Q ss_pred CCeEEEEcCChHHHHHHHHHH-HcCCCCCcEEEEeCCCCCC-------CCCC--cc-cccccCCCC-----CCCCCCcee
Q 012545 5 SFKYVILGGGVSAGYAAREFA-KQGVKPGELAIISKEAVAP-------YERP--AL-SKAYLFPEG-----TARLPGFHV 68 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~-~~g~~~~~V~vie~~~~~~-------~~~~--~~-~~~~~~~~~-----~~~~~~~~~ 68 (461)
.+||+|||||++|+++|..|+ +.|++ |+|+|+++... |..+ .. +..+..... ...+... .
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~---v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~-~ 83 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLT---TVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTT-Y 83 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCC---EEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBS-E
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCC---EEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCccc-C
Confidence 579999999999999999999 88876 99999986432 1110 00 000100000 0000000 0
Q ss_pred ecCCCCCCCCHhHHHHcCc--EEEcCCeEEEEeCCCC----EEEcCCCcEEecCEEEEccC--CCccccccccccccCcc
Q 012545 69 CVGSGGERLLPEWYKEKGI--ELILSTEIVRADIASK----TLLSATGLIFKYQILVIATG--STVSITSLTSIRSKHCL 140 (461)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~v--~~~~~~~v~~i~~~~~----~v~~~~~~~~~~d~liiAtG--~~~~~~~~~g~~~~~~~ 140 (461)
........++....++.++ ++.++++|.+++.+.. .|.+.+|+++.||+||+||| +.|.+|++||+.++.
T Consensus 84 ~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~-- 161 (540)
T 3gwf_A 84 ITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFPNLPGLDTFE-- 161 (540)
T ss_dssp EEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCCCCCTTGGGCC--
T ss_pred CCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCCCCCCCccccC--
Confidence 0000011223445567787 7888999999987665 67888888899999999999 689888888875311
Q ss_pred ccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEc
Q 012545 141 CCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVY 220 (461)
Q Consensus 141 ~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~ 220 (461)
| .+++.....+.. ...+++|+|||+|.+|+|+|..|++.+.+|++++
T Consensus 162 ----------------------g----~~~~~~~~~~~~-------~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~ 208 (540)
T 3gwf_A 162 ----------------------G----ETIHTAAWPEGK-------SLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFV 208 (540)
T ss_dssp ----------------------S----EEEEGGGCCSSC-------CCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEE
T ss_pred ----------------------C----CEEEeecCCCcc-------ccccceEEEECCCchHHHHHHHHHhhCCEEEEEE
Confidence 0 111111100000 1157899999999999999999999999999999
Q ss_pred cCCcc-CCc---ccCHHHHHHHH---------------------------------------------------------
Q 012545 221 PEPWC-MPR---LFTADIAAFYE--------------------------------------------------------- 239 (461)
Q Consensus 221 ~~~~~-~~~---~~~~~~~~~~~--------------------------------------------------------- 239 (461)
|.+.+ ++. .+++...+.++
T Consensus 209 r~~~~i~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~ 288 (540)
T 3gwf_A 209 RTPQYSVPVGNRPVNPEQIAEIKADYDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGD 288 (540)
T ss_dssp SSCCCEEECCCCBCCHHHHHHHHHTHHHHHHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSC
T ss_pred CCCCccccCccCCCCHHHHHHHHhccHHHHHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhh
Confidence 99874 322 12222222111
Q ss_pred ----------------HH---------------------------------HHhcCcEEEc--CCcEEEEEecCCCCEEE
Q 012545 240 ----------------GY---------------------------------YANKGIKIIK--GTVAVGFTTNADGEVKE 268 (461)
Q Consensus 240 ----------------~~---------------------------------l~~~GV~v~~--~~~v~~i~~~~~g~~~~ 268 (461)
+. +.+.+|+++. +..|++++. + +
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~v~dp~~~~~l~P~~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~--~----g 362 (540)
T 3gwf_A 289 IATDEAANEAAASFIRAKVAEIIEDPETARKLMPKGLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTA--K----G 362 (540)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHCCSHHHHHHHCCCSCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECS--S----E
T ss_pred hhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEec--C----e
Confidence 00 1144788885 678888865 3 5
Q ss_pred EEeCCCcEEecCEEEEccCCCCChhhhhc-ccccCCCcEEeC----------CCCCC-CCCCEEEe-CcccccCccccCc
Q 012545 269 VKLKDGRTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETD----------DFFKT-SADDVYAV-GDVATFPMKLYRE 335 (461)
Q Consensus 269 v~~~~G~~i~aD~vi~a~G~~p~~~~~~~-~~~~~~g~i~vd----------~~~~t-~~~~vya~-GD~~~~~~~~~~~ 335 (461)
|.++||+++++|+||+|||++++..++.. .+. ..+++.++ ..+.+ +.||+|.+ |..+...
T Consensus 363 v~~~dG~~~~~DvIV~ATGf~~~~~~~~~~~i~-g~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~~~------ 435 (540)
T 3gwf_A 363 VVTEDGVLHELDVLVFATGFDAVDGNYRRIEIR-GRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGPFT------ 435 (540)
T ss_dssp EEETTCCEEECSEEEECCCBSCSSHHHHTSEEE-CGGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCBCS------
T ss_pred EEcCCCCEEECCEEEECCccCccccCcCcceEE-CCCCcCHHHhhccChhhccccccCCCCceEEEecCCCCCc------
Confidence 88999999999999999999999854421 111 12233333 22333 78999999 8766521
Q ss_pred ceeeccHHHHHHHHHHHHHHHhcc
Q 012545 336 MRRVEHVDHARKSAEQAVKTIMAT 359 (461)
Q Consensus 336 ~~~~~~~~~A~~~g~~aa~~i~~~ 359 (461)
.....+..|++++++.|...
T Consensus 436 ----s~~~~~e~q~~~i~~~i~~~ 455 (540)
T 3gwf_A 436 ----NLPPSIETQVEWISDTIGYA 455 (540)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHH
T ss_pred ----cHHHHHHHHHHHHHHHHHHH
Confidence 23456677888888877543
No 89
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.95 E-value=1.9e-28 Score=259.21 Aligned_cols=259 Identities=17% Similarity=0.210 Sum_probs=184.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
.+||+|||||+||++||..|++.|++ |+|+|+++...+. ..+.. .+++.... ......+..++++
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~---V~lie~~~~~gg~-~~~~~---------~~~~~~~~--~~~~~~~~~~~~~ 437 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQ---VTLFDAHSEIGGQ-FNIAK---------QIPGKEEF--YETLRYYRRMIEV 437 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCE---EEEEESSSSSCTT-HHHHT---------TSTTCTTH--HHHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCe---EEEEeCCCCCCCe-eeccc---------cCCCHHHH--HHHHHHHHHHHHH
Confidence 58999999999999999999999876 9999998754322 00000 01110000 0000123455667
Q ss_pred cCcEEEcCCeEEEEeCCCCEEEcCCCcEE-ecCEEEEccCCCccccccccccccCccccccccCCcccccccccCCCCCC
Q 012545 85 KGIELILSTEIVRADIASKTLLSATGLIF-KYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVEG 163 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~v~~~~~~~~-~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g 163 (461)
.+++++.++.+.. ..+ .||+||+|||++|.+|.+||
T Consensus 438 ~gv~~~~~~~v~~-------------~~~~~~d~lviAtG~~p~~~~i~G------------------------------ 474 (671)
T 1ps9_A 438 TGVTLKLNHTVTA-------------DQLQAFDETILASGIVPRTPPIDG------------------------------ 474 (671)
T ss_dssp HTCEEEESCCCCS-------------SSSCCSSEEEECCCEEECCCCCBT------------------------------
T ss_pred cCCEEEeCcEecH-------------HHhhcCCEEEEccCCCcCCCCCCC------------------------------
Confidence 8999999865421 114 89999999999995554444
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCC-----------------------------
Q 012545 164 ADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNI----------------------------- 214 (461)
Q Consensus 164 ~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~----------------------------- 214 (461)
.+..++++..+ . +.. ....+++|+|||+|++|+|+|..|++.|.
T Consensus 475 ~~~~~v~~~~~---~--l~~--~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~ 547 (671)
T 1ps9_A 475 IDHPKVLSYLD---V--LRD--KAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQG 547 (671)
T ss_dssp TTSTTEEEHHH---H--HTS--CCCCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTC
T ss_pred CCCCcEeeHHH---H--hhC--CCCCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccc
Confidence 33345665421 1 110 11257899999999999999999998773
Q ss_pred --------cEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCC--cEEecCEEEE
Q 012545 215 --------DVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDG--RTLEADIVVV 284 (461)
Q Consensus 215 --------~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G--~~i~aD~vi~ 284 (461)
+|+++++.+..+...+++.....+.+.|++.||++++++++++++. ++ ..++ .+| +++++|.||+
T Consensus 548 ~~~~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~--~~--v~~~-~~G~~~~i~~D~Vi~ 622 (671)
T 1ps9_A 548 MQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDD--DG--LHVV-INGETQVLAVDNVVI 622 (671)
T ss_dssp CCCCCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEET--TE--EEEE-ETTEEEEECCSEEEE
T ss_pred cccCCCCcEEEEEEecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEEeC--Ce--EEEe-cCCeEEEEeCCEEEE
Confidence 4667777766665556777788888999999999999999999974 33 2232 577 5799999999
Q ss_pred ccCCCCChhhhhcccccCCCcEEeCCCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHH
Q 012545 285 GVGGRPLISLFKGQVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTI 356 (461)
Q Consensus 285 a~G~~p~~~~~~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i 356 (461)
|+|++||+++++.. +...++||++|||+.... ..+..|.+||..+|.||
T Consensus 623 a~G~~p~~~l~~~l--------------~~~g~~v~aiGD~~~~~~---------~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 623 CAGQEPNRALAQPL--------------IDSGKTVHLIGGCDVAME---------LDARRAIAQGTRLALEI 671 (671)
T ss_dssp CCCEEECCTTHHHH--------------HTTTCCEEECGGGTCCSS---------CCHHHHHHHHHHHHHHC
T ss_pred CCCccccHHHHHHH--------------HhcCCCEEEECCcCccCc---------hhHHHHHHHHHHHHHhC
Confidence 99999999876521 122478999999998653 35889999999999885
No 90
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.94 E-value=1.7e-26 Score=237.90 Aligned_cols=184 Identities=15% Similarity=0.198 Sum_probs=121.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCC-------CCCC--cc-cccccCCCCCC--CCCCceee--
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP-------YERP--AL-SKAYLFPEGTA--RLPGFHVC-- 69 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~-------~~~~--~~-~~~~~~~~~~~--~~~~~~~~-- 69 (461)
..+||||||||++|+++|..|++.|++ |+|||+++... |..+ .. +..+....... .-+.+...
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~---v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~ 96 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLT---VRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYA 96 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSC
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCC---EEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCC
Confidence 357999999999999999999999886 99999976422 1110 00 00010000000 00000000
Q ss_pred cCCCCCCCCHhHHHHcCc--EEEcCCeEEEEeCCCC----EEEcCCCcEEecCEEEEccC--CCccccccccccccCccc
Q 012545 70 VGSGGERLLPEWYKEKGI--ELILSTEIVRADIASK----TLLSATGLIFKYQILVIATG--STVSITSLTSIRSKHCLC 141 (461)
Q Consensus 70 ~~~~~~~~~~~~~~~~~v--~~~~~~~v~~i~~~~~----~v~~~~~~~~~~d~liiAtG--~~~~~~~~~g~~~~~~~~ 141 (461)
...+...++....++.++ ++.++++|++++.+.. .|.+.+|+++.||+||+||| +.|.+|++||+.++.-
T Consensus 97 ~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g-- 174 (549)
T 4ap3_A 97 TQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANTPAFDGLDRFTG-- 174 (549)
T ss_dssp BHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCCCCCTTGGGCCS--
T ss_pred CHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCCCCCCCcccCCC--
Confidence 000011123344566787 7889999999987665 68888898899999999999 8998898888753110
Q ss_pred cccccCCcccccccccCCCCCCCCCCCEEEeCCHH-HHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEc
Q 012545 142 CFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREID-DADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVY 220 (461)
Q Consensus 142 ~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~ 220 (461)
.+++..... +... ..+++|+|||+|.+|+|+|..|++.+.+|++++
T Consensus 175 --------------------------~~~~~~~~~~~~~~-------~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~ 221 (549)
T 4ap3_A 175 --------------------------DIVHTARWPHDGVD-------FTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQ 221 (549)
T ss_dssp --------------------------EEEEGGGCCTTCCC-------CBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEE
T ss_pred --------------------------ceEEeccccccccc-------cCCCEEEEECCCchHHHHHHHHHhhCCEEEEEE
Confidence 111111110 0101 147899999999999999999999999999999
Q ss_pred cCCcc
Q 012545 221 PEPWC 225 (461)
Q Consensus 221 ~~~~~ 225 (461)
|.+.+
T Consensus 222 r~~~~ 226 (549)
T 4ap3_A 222 RSANY 226 (549)
T ss_dssp SSCCC
T ss_pred CCCCc
Confidence 99874
No 91
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.93 E-value=2e-26 Score=237.09 Aligned_cols=191 Identities=17% Similarity=0.183 Sum_probs=117.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCC-------CC--CCcccc---cccCCCCCCCCCCceeec-
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP-------YE--RPALSK---AYLFPEGTARLPGFHVCV- 70 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~-------~~--~~~~~~---~~~~~~~~~~~~~~~~~~- 70 (461)
..+||||||||++|+++|..|++.|++ |+|||+++... |. ++.... .+.+......-..+....
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~---v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~ 84 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMK---VLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFA 84 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSC
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCC---EEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCC
Confidence 458999999999999999999999886 99999986421 11 000000 000000000000000000
Q ss_pred -CCCCCCCCHhHHHHcCc--EEEcCCeEEEEeCCCC----EEEcCCCcEEecCEEEEccC--CCccccccccccccCccc
Q 012545 71 -GSGGERLLPEWYKEKGI--ELILSTEIVRADIASK----TLLSATGLIFKYQILVIATG--STVSITSLTSIRSKHCLC 141 (461)
Q Consensus 71 -~~~~~~~~~~~~~~~~v--~~~~~~~v~~i~~~~~----~v~~~~~~~~~~d~liiAtG--~~~~~~~~~g~~~~~~~~ 141 (461)
..+...++....++.++ .+.++++|..++.+.. .|.+.+|+++.||+||+||| +.|.+|++||+.++.-..
T Consensus 85 ~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~ 164 (545)
T 3uox_A 85 SQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRMPDIKGIDSFKGES 164 (545)
T ss_dssp BHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---CCCTTGGGCCSEE
T ss_pred CHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcCCCCCCccccCCCe
Confidence 00001123344556676 6888889999987654 68888898899999999999 899999999986421111
Q ss_pred cccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcc
Q 012545 142 CFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYP 221 (461)
Q Consensus 142 ~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~ 221 (461)
....+ .+. ..++.. . .. ...+++|+|||+|.+|+|+|..|++.+.+|++++|
T Consensus 165 ~h~~~---------~~~-~~~~~~--~---------~~-------~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r 216 (545)
T 3uox_A 165 FHSSR---------WPT-DAEGAP--K---------GV-------DFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQR 216 (545)
T ss_dssp EEGGG---------CCB-CTTSCB--S---------CC-------CCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEES
T ss_pred EEccc---------ccc-cccccc--c---------cc-------ccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEc
Confidence 11000 000 000000 0 00 01478999999999999999999999999999999
Q ss_pred CCcc
Q 012545 222 EPWC 225 (461)
Q Consensus 222 ~~~~ 225 (461)
.+.+
T Consensus 217 ~~~~ 220 (545)
T 3uox_A 217 TPNW 220 (545)
T ss_dssp SCCC
T ss_pred CCCc
Confidence 9874
No 92
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.92 E-value=6.8e-25 Score=226.47 Aligned_cols=302 Identities=13% Similarity=0.170 Sum_probs=184.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCC--C-CCcccccccCCCCCCCCC---C----ceeecCC-
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPY--E-RPALSKAYLFPEGTARLP---G----FHVCVGS- 72 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~--~-~~~~~~~~~~~~~~~~~~---~----~~~~~~~- 72 (461)
..+||+|||||++|+++|..|++.|++ |+|+|+++.... . .+..............+. . +.+....
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~---v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~ 91 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRS---VHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYA 91 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSC
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCC---EEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccC
Confidence 358999999999999999999999986 999999865320 0 000000000000000000 0 0000000
Q ss_pred ---CCCCCCHhHHHHcC--cEEEcCCeEEEEeCCCC----EEEcCCCcEEecCEEEEccC--CCccccccccccccCccc
Q 012545 73 ---GGERLLPEWYKEKG--IELILSTEIVRADIASK----TLLSATGLIFKYQILVIATG--STVSITSLTSIRSKHCLC 141 (461)
Q Consensus 73 ---~~~~~~~~~~~~~~--v~~~~~~~v~~i~~~~~----~v~~~~~~~~~~d~liiAtG--~~~~~~~~~g~~~~~~~~ 141 (461)
+...++....++.+ ..+.++++|.+++.+.. .|.+.+|+++.+|+||+|+| +.|.+|++||+..+
T Consensus 92 ~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~~p~i~G~~~f---- 167 (542)
T 1w4x_A 92 SQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQLPNFPGLKDF---- 167 (542)
T ss_dssp BHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCCCCCCCTTGGGC----
T ss_pred CHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCCCCCCCCCcccC----
Confidence 00011222234444 56888999999876442 57777888899999999999 57888888887431
Q ss_pred cccccCCcccccccccCCCCCCCCCCCEEEeCCHH-HHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEc
Q 012545 142 CFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREID-DADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVY 220 (461)
Q Consensus 142 ~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~ 220 (461)
.| .+++..... +.. ...+++|+|||+|.+|+|++..+++.+.+|+++.
T Consensus 168 --------------------~G----~~~hs~~~~~~~~-------~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~ 216 (542)
T 1w4x_A 168 --------------------AG----NLYHTGNWPHEPV-------DFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQ 216 (542)
T ss_dssp --------------------CS----EEEEGGGCCSSCC-------CCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEE
T ss_pred --------------------CC----ceEECCCCCCchh-------ccCCCEEEEECCCccHHHHHHHHhhcCceEEEEE
Confidence 11 011111000 000 0147999999999999999999999999999999
Q ss_pred cCCccC-Cc---ccCHHHH-------------------------------------------------------------
Q 012545 221 PEPWCM-PR---LFTADIA------------------------------------------------------------- 235 (461)
Q Consensus 221 ~~~~~~-~~---~~~~~~~------------------------------------------------------------- 235 (461)
|.+.+. +. .+.+...
T Consensus 217 r~~~~~~p~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~ 296 (542)
T 1w4x_A 217 RTPHFAVPARNAPLDPEFLADLKKRYAEFREESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDIL 296 (542)
T ss_dssp SSCCCEEECCCCBCCHHHHHHHHTTHHHHHHHHHTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTT
T ss_pred cCCcccccCCCCCCCHHHHHHHHhhCHHHHHHHHhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHh
Confidence 987652 21 0111111
Q ss_pred ----------HHHHHHH-----------------------------------HhcCcEEE--cCCcEEEEEecCCCCEEE
Q 012545 236 ----------AFYEGYY-----------------------------------ANKGIKII--KGTVAVGFTTNADGEVKE 268 (461)
Q Consensus 236 ----------~~~~~~l-----------------------------------~~~GV~v~--~~~~v~~i~~~~~g~~~~ 268 (461)
+.+.+.+ .+.+|+++ .+..|++++. + +
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~P~~~~~~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~--~----g 370 (542)
T 1w4x_A 297 RDRDANERVAEFIRNKIRNTVRDPEVAERLVPKGYPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITP--R----G 370 (542)
T ss_dssp TCHHHHHHHHHHHHHHHHHHCSSHHHHHHHSCCSSCSSSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECS--S----E
T ss_pred cChHHHHHHHHHHHHHHHHHcCCHHHHHhcCCCCCCccccCCCCCccHHHHhCCCCEEEEecCCCCceEEcC--C----e
Confidence 0111111 11346665 3567888864 2 5
Q ss_pred EEeCCCcEEecCEEEEccCCCCChhhhhcc-cccCCCcEEeCCC----------CCC-CCCCEEEe-CcccccCccccCc
Q 012545 269 VKLKDGRTLEADIVVVGVGGRPLISLFKGQ-VAENKGGIETDDF----------FKT-SADDVYAV-GDVATFPMKLYRE 335 (461)
Q Consensus 269 v~~~~G~~i~aD~vi~a~G~~p~~~~~~~~-~~~~~g~i~vd~~----------~~t-~~~~vya~-GD~~~~~~~~~~~ 335 (461)
|.++| +++++|.||+|||+++++.++... +. ..+++.+++. +.+ +.||+|++ |+.+....
T Consensus 371 v~~~d-~~~~~D~ii~atG~~~~~~~~~~~~i~-g~~G~~l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~~~----- 443 (542)
T 1w4x_A 371 VRTSE-REYELDSLVLATGFDALTGALFKIDIR-GVGNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSAL----- 443 (542)
T ss_dssp EEESS-CEEECSEEEECCCCCCTTHHHHTSEEE-CGGGCBHHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSGGG-----
T ss_pred EEeCC-eEEecCEEEEcCCccccccCcCceeeE-CCCCCCHHHhhcCchheecccccCCCCceEEEcCCCCCccc-----
Confidence 88889 899999999999999987766432 22 2234444432 222 67888887 87764221
Q ss_pred ceeeccH-HHHHHHHHHHHHHHhccc
Q 012545 336 MRRVEHV-DHARKSAEQAVKTIMATE 360 (461)
Q Consensus 336 ~~~~~~~-~~A~~~g~~aa~~i~~~~ 360 (461)
+++ ..|..|++.++++|....
T Consensus 444 ----~~~~~~~e~q~~~ia~~i~~~~ 465 (542)
T 1w4x_A 444 ----SNMLVSIEQHVEWVTDHIAYMF 465 (542)
T ss_dssp ----SCHHHHHHHHHHHHHHHHHHHH
T ss_pred ----ccHHHHHHHHHHHHHHHHHHHH
Confidence 334 678889999999987643
No 93
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.90 E-value=7.3e-23 Score=180.33 Aligned_cols=158 Identities=19% Similarity=0.169 Sum_probs=132.2
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCc--------cc-----CHHHHHHHHHHHHhcCcEEEcCCcEEEE
Q 012545 192 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR--------LF-----TADIAAFYEGYYANKGIKIIKGTVAVGF 258 (461)
Q Consensus 192 ~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~--------~~-----~~~~~~~~~~~l~~~GV~v~~~~~v~~i 258 (461)
+++|||+|++|+++|..|++.|.+|+++++.+..+.. .+ ++++.+.+.+.+++.|++++.+ +|+++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i 81 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VVKGV 81 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEE
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEE
Confidence 6899999999999999999999999999998765521 12 5788999999999999999999 99999
Q ss_pred EecCCCCEEEEEeCCCcEEecCEEEEccCCCCChhhhhcccccCCCcEEeCCCCCCCCCCEEEeCcccccCccccCccee
Q 012545 259 TTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRR 338 (461)
Q Consensus 259 ~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~~~~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~~ 338 (461)
+.++++ ..+++++| ++++|.||+|+|.+|+.. -..++..++|.|.||+++||+.|+|||+|||+..+.
T Consensus 82 ~~~~~~--~~v~~~~g-~i~ad~vI~A~G~~~~~~-~~~g~~~~~g~i~vd~~~~t~~~~i~a~GD~~~~~~-------- 149 (180)
T 2ywl_A 82 RDMGGV--FEVETEEG-VEKAERLLLCTHKDPTLP-SLLGLTRRGAYIDTDEGGRTSYPRVYAAGVARGKVP-------- 149 (180)
T ss_dssp EECSSS--EEEECSSC-EEEEEEEEECCTTCCHHH-HHHTCCEETTEECCCTTCBCSSTTEEECGGGGTCCS--------
T ss_pred EEcCCE--EEEEECCC-EEEECEEEECCCCCCCcc-ccCCCCccCceEEeCCCCCcCCCCEEEeecccCcch--------
Confidence 874333 56888888 899999999999999641 223444457889999999999999999999998753
Q ss_pred eccHHHHHHHHHHHHHHHhcccCCC
Q 012545 339 VEHVDHARKSAEQAVKTIMATEGGK 363 (461)
Q Consensus 339 ~~~~~~A~~~g~~aa~~i~~~~~~~ 363 (461)
+++..|..||+.||.||.+...+.
T Consensus 150 -~~~~~A~~~g~~aa~~i~~~~~~~ 173 (180)
T 2ywl_A 150 -GHAIISAGDGAYVAVHLVSDLRGE 173 (180)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHTS
T ss_pred -hhHHHHHHhHHHHHHHHHHHhhhc
Confidence 368889999999999999765443
No 94
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.83 E-value=1.1e-18 Score=177.97 Aligned_cols=290 Identities=13% Similarity=0.083 Sum_probs=163.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCC-----------CCcEEEEeCCCCCCCCCCcc-cccccCCCCCCCC-----CCce
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVK-----------PGELAIISKEAVAPYERPAL-SKAYLFPEGTARL-----PGFH 67 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~-----------~~~V~vie~~~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~ 67 (461)
.+||||||+||+||++|..|.+.|.+ ....+.+|+.+.+.|+..++ ....+......++ |...
T Consensus 39 i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s~ 118 (501)
T 4b63_A 39 LHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRSS 118 (501)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTCT
T ss_pred cCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCCc
Confidence 58999999999999999999886532 12468899988777654321 1111110000000 1000
Q ss_pred ee--------------cC-CC------CCCCCHhHH-HHcCcEEEcCCeEEEEeCCC----------CEEEcCCC-----
Q 012545 68 VC--------------VG-SG------GERLLPEWY-KEKGIELILSTEIVRADIAS----------KTLLSATG----- 110 (461)
Q Consensus 68 ~~--------------~~-~~------~~~~~~~~~-~~~~v~~~~~~~v~~i~~~~----------~~v~~~~~----- 110 (461)
+. .. .. ....+.+|+ ++.+..+.++++|+++.+.. -+|++.++
T Consensus 119 ~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~ 198 (501)
T 4b63_A 119 FTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEI 198 (501)
T ss_dssp TSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCE
T ss_pred cchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceE
Confidence 00 00 00 001112222 33456688888999886432 23444332
Q ss_pred cEEecCEEEEccCCCccccccccccccCccccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCC
Q 012545 111 LIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKN 190 (461)
Q Consensus 111 ~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~ 190 (461)
+++.+++||+|||..|.+|.+++ . ...+++...+.....-.. -....+
T Consensus 199 ~~~~ar~vVlatG~~P~iP~~~~------------------------------~-~g~v~Hss~y~~~~~~~~-~~~~~g 246 (501)
T 4b63_A 199 SARRTRKVVIAIGGTAKMPSGLP------------------------------Q-DPRIIHSSKYCTTLPALL-KDKSKP 246 (501)
T ss_dssp EEEEEEEEEECCCCEECCCTTSC------------------------------C-CTTEEEGGGHHHHHHHHS-CCTTSC
T ss_pred EEEEeCEEEECcCCCCCCCCCCC------------------------------C-Ccceeeccccccchhhcc-ccccCC
Confidence 36889999999998875442211 1 245777665543222100 011368
Q ss_pred CcEEEECCCHHHHHHHHHHHHC--CCcEEEEccCCccCCc--------ccCHHH-----------HHH------------
Q 012545 191 GKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWCMPR--------LFTADI-----------AAF------------ 237 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~--g~~Vtli~~~~~~~~~--------~~~~~~-----------~~~------------ 237 (461)
|+|+|||+|.+|+|++..|.+. +.+|+++.|.+.+.+. .+.++. .+.
T Consensus 247 KrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~ 326 (501)
T 4b63_A 247 YNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSAMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSV 326 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSSCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSC
T ss_pred cEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcc
Confidence 9999999999999999999764 7899999998765432 111111 111
Q ss_pred --------HHH-----HHH-----hcCcEEEcCCcEEEEEecCC-CCE-----------EEEEeCCCcEEecCEEEEccC
Q 012545 238 --------YEG-----YYA-----NKGIKIIKGTVAVGFTTNAD-GEV-----------KEVKLKDGRTLEADIVVVGVG 287 (461)
Q Consensus 238 --------~~~-----~l~-----~~GV~v~~~~~v~~i~~~~~-g~~-----------~~v~~~~G~~i~aD~vi~a~G 287 (461)
+.+ .+. .....+..+..+.++..... +++ ..+.+.+|+++++|.||+|||
T Consensus 327 v~~~li~~i~~~~y~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATG 406 (501)
T 4b63_A 327 VRLELIEEIYNDMYLQRVKNPDETQWQHRILPERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATG 406 (501)
T ss_dssp BCHHHHHHHHHHHHHHHHHCSCGGGCSSEEECSEEEEEEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCC
T ss_pred cCHHHHHHHHHHHHhhccCCCcccccceeecCCcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcC
Confidence 101 111 01124555555555543221 111 235567889999999999999
Q ss_pred CCCChh-hhhc---cccc-CCCcEEeCCCCCC--------CCCCEEEeCccc
Q 012545 288 GRPLIS-LFKG---QVAE-NKGGIETDDFFKT--------SADDVYAVGDVA 326 (461)
Q Consensus 288 ~~p~~~-~~~~---~~~~-~~g~i~vd~~~~t--------~~~~vya~GD~~ 326 (461)
++|+.. ++.. .+.. .+|.+.|+..++. ..++||+.|-+-
T Consensus 407 y~~~~p~~L~~~~~~l~~d~~g~~~v~rdy~~~~~~~~~~~~~~i~~qg~~~ 458 (501)
T 4b63_A 407 YNRNAHERLLSKVQHLRPTGQDQWKPHRDYRVEMDPSKVSSEAGIWLQGCNE 458 (501)
T ss_dssp EECCTHHHHTGGGGGGSSTTCCSCCBCTTSBBCCCTTTBCTTCEEEECSCCH
T ss_pred CCCCCcchhcchhhhcCcCcCCCeeeCCCcEEeecCCccCCCceEEecCCCc
Confidence 998864 2222 1222 5678888876653 246799999544
No 95
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.72 E-value=4e-19 Score=179.98 Aligned_cols=221 Identities=13% Similarity=0.084 Sum_probs=125.4
Q ss_pred HHHHcCcEEEcCCeEEEEeCCCCEE---Ec-CCCcEEecCEEEEccCCCccccccccccccCccccccccCCcccccccc
Q 012545 81 WYKEKGIELILSTEIVRADIASKTL---LS-ATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRL 156 (461)
Q Consensus 81 ~~~~~~v~~~~~~~v~~i~~~~~~v---~~-~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~ 156 (461)
.+++.+++++.++.+ ++..+...+ .+ .++.++.+|.+|+|||+.+.++.++.
T Consensus 128 ~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~~~~~~~----------------------- 183 (472)
T 2e5v_A 128 LAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSYLYEYSS----------------------- 183 (472)
T ss_dssp HHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGGGSSSBS-----------------------
T ss_pred HHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcccCcccc-----------------------
Confidence 335679999999889 887655543 33 23335789999999999884322110
Q ss_pred cCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhc---C-CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCH
Q 012545 157 TDFGVEGADAKNIFYLREIDDADKLVEAIKAK---K-NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTA 232 (461)
Q Consensus 157 ~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~---~-~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~ 232 (461)
. .++...+++ .-+.+.-..+... . ...++++|+| +++++..+...|..+ +..+.+++++. +++
T Consensus 184 ~---~~~~tGdgi------~~a~~aGa~~~d~e~~q~~p~~~~~ggg--~~~~ae~~~~~G~~~-v~~~g~rf~~~-~~~ 250 (472)
T 2e5v_A 184 T---QSTNIGDGM------AIAFKAGTILADMEFVQFHPTVTSLDGE--VFLLTETLRGEGAQI-INENGERFLFN-YDK 250 (472)
T ss_dssp S---CTTCSCHHH------HHHHHTTCCEECTTCEEEEEEEECGGGC--CEECCTHHHHTTCEE-EETTCCCGGGG-TCT
T ss_pred C---CCCCchHHH------HHHHHcCCCEeCCcceEEEeEEEccCCC--ceeeehhhcCCceEE-ECCCCCCCCcc-CCc
Confidence 0 011111110 0000000000000 0 1133455666 788888888889887 78888888865 344
Q ss_pred HH--------HHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEe-cCEEEEccCCCCChhhhhcc--ccc
Q 012545 233 DI--------AAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLE-ADIVVVGVGGRPLISLFKGQ--VAE 301 (461)
Q Consensus 233 ~~--------~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~-aD~vi~a~G~~p~~~~~~~~--~~~ 301 (461)
+. ...+.+.+++.|. ++++... + +. +. +.++ .+.++++.|..|+ ++++.. ...
T Consensus 251 ~~el~~rd~v~~~i~~~~~~~~~-v~ld~~~--~----~~------~~--~~~~~~~~~~~~~G~dp~-~~i~v~p~~~~ 314 (472)
T 2e5v_A 251 RGELAPRDILSRAIYIEMLKGHK-VFIDLSK--I----ED------FE--RKFPVVAKYLARHGHNYK-VKIPIFPAAHF 314 (472)
T ss_dssp TGGGSCHHHHHHHHHHHHHHTCC-EEEECTT--C----TT------HH--HHCHHHHHHHHHTTCCTT-SCEECEEEEEE
T ss_pred ccCcCchhHHHHHHHHHHHhCCc-EEEeccc--h----HH------HH--HHhHHHHHHHHHhCcCcc-cceEeehhhce
Confidence 32 5566666666653 3322110 0 00 00 1233 3667788999998 655432 112
Q ss_pred CCCcEEeCCCCCCCCCCEEEeCcccc-cCccccCcceee--ccHHHHHHHHHHHHHHHhc
Q 012545 302 NKGGIETDDFFKTSADDVYAVGDVAT-FPMKLYREMRRV--EHVDHARKSAEQAVKTIMA 358 (461)
Q Consensus 302 ~~g~i~vd~~~~t~~~~vya~GD~~~-~~~~~~~~~~~~--~~~~~A~~~g~~aa~~i~~ 358 (461)
..|+|.||+++||++|+|||+|||+. .... .. +. .....+...|+.|++++.+
T Consensus 315 ~~GGI~vd~~~~t~ipgLyAaGd~a~~~~hg---~~-rl~~~sl~~~~v~G~~a~~~~a~ 370 (472)
T 2e5v_A 315 VDGGIRVNIRGESNIVNLYAIGEVSDSGLHG---AN-RLASNSLLEGLVFGINLPRYVDS 370 (472)
T ss_dssp ESCEEECCTTCBCSSBTEEECGGGEECSSST---TS-CCTTHHHHHHHHHHHHGGGTTTS
T ss_pred eCCCeEECCCCccccCCEEecchhcccccCC---CC-CCCcccHHHHHHHHHHHHHHHHh
Confidence 57999999999999999999999997 3211 11 11 1233444556666666553
No 96
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.62 E-value=4.7e-15 Score=135.73 Aligned_cols=156 Identities=15% Similarity=0.166 Sum_probs=112.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCc-----------------cCCcc------cCHHHHHHHHHHHHhc-C
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW-----------------CMPRL------FTADIAAFYEGYYANK-G 246 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~-----------------~~~~~------~~~~~~~~~~~~l~~~-G 246 (461)
.+|+|||+|+.|+++|..|++.|.+|+++++... +.... ....+.+.+.+.+++. |
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~~~g 83 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEGLRP 83 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHTCTT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHcCCC
Confidence 4799999999999999999999999999998621 11000 1236677888889887 9
Q ss_pred cEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCCh--------------------hhh----hcccccC
Q 012545 247 IKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI--------------------SLF----KGQVAEN 302 (461)
Q Consensus 247 V~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~--------------------~~~----~~~~~~~ 302 (461)
++++ +++|+++.. +++.+..|.+.+|+++.+|.||+|+|..++. .+. +.++...
T Consensus 84 v~i~-~~~v~~i~~-~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l~~~l~~~g~~~~ 161 (232)
T 2cul_A 84 LHLF-QATATGLLL-EGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLLEDLSRLGFRFV 161 (232)
T ss_dssp EEEE-ECCEEEEEE-ETTEEEEEEETTSCCEECSEEEECCTTCSSCEEEETTEEESEEETTEECCSHHHHHHHHTTCCEE
T ss_pred cEEE-EeEEEEEEE-eCCEEEEEEECCCCEEECCEEEECCCCChhhceecCCccCCCCCCcccchhhhCHHHHhCCCeEE
Confidence 9999 579999987 3455667888999899999999999984432 121 1122221
Q ss_pred CCc----------------EEeC-------CCCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhcc
Q 012545 303 KGG----------------IETD-------DFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMAT 359 (461)
Q Consensus 303 ~g~----------------i~vd-------~~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 359 (461)
.+. ..+. ...+|++|+|||+|||+ .. ..+..|..||+.+|.+|...
T Consensus 162 ~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~~----------g~~~~~~~~g~~~a~~i~~~ 230 (232)
T 2cul_A 162 EREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-RE----------GDYARMSEEGKRLAEHLLHE 230 (232)
T ss_dssp EEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-SC----------CCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-cC----------ccHHHHHHHHHHHHHHHHhh
Confidence 100 1111 01127999999999999 53 36778899999999999864
No 97
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.59 E-value=8.3e-16 Score=152.20 Aligned_cols=120 Identities=18% Similarity=0.279 Sum_probs=74.2
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCC-------CCCccc------ccccCCCCCCCCC---
Q 012545 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPY-------ERPALS------KAYLFPEGTARLP--- 64 (461)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~-------~~~~~~------~~~~~~~~~~~~~--- 64 (461)
|| +.+||+|||||++|++||..|+++|.+ |+|+|+++.... .++.+. ..++.. ......
T Consensus 1 MM-~~~dViIIGgG~aGl~aA~~la~~G~~---V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~-~~~~~~~~l 75 (401)
T 2gqf_A 1 MS-QYSENIIIGAGAAGLFCAAQLAKLGKS---VTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQ-NPHFVKSAL 75 (401)
T ss_dssp CE-EECSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECS-CTTSTHHHH
T ss_pred CC-CCCCEEEECCcHHHHHHHHHHHhCCCC---EEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccC-CHHHHHHHH
Confidence 55 479999999999999999999999987 999999874310 111111 011100 000000
Q ss_pred ---------------Ccee-------ecCCCC----CCCCHhHHHHcCcEEEcCCeEEEEeCC----CC--EEEcCCCcE
Q 012545 65 ---------------GFHV-------CVGSGG----ERLLPEWYKEKGIELILSTEIVRADIA----SK--TLLSATGLI 112 (461)
Q Consensus 65 ---------------~~~~-------~~~~~~----~~~~~~~~~~~~v~~~~~~~v~~i~~~----~~--~v~~~~~~~ 112 (461)
++.. .+.... ...+.+.+++.|++++.+++|+++..+ .. .|.+.++ +
T Consensus 76 ~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~ 154 (401)
T 2gqf_A 76 ARYTNWDFISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-Q 154 (401)
T ss_dssp HHSCHHHHHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-E
T ss_pred HhCCHHHHHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-E
Confidence 0000 000000 012334455679999999999998754 33 3555555 6
Q ss_pred EecCEEEEccCCCc
Q 012545 113 FKYQILVIATGSTV 126 (461)
Q Consensus 113 ~~~d~liiAtG~~~ 126 (461)
+.+|++|+|||+.+
T Consensus 155 i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 155 WQCKNLIVATGGLS 168 (401)
T ss_dssp EEESEEEECCCCSS
T ss_pred EECCEEEECCCCcc
Confidence 99999999999887
No 98
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.57 E-value=1.9e-17 Score=159.77 Aligned_cols=257 Identities=13% Similarity=0.023 Sum_probs=143.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHH--cCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAK--QGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY 82 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~--~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (461)
.+||+|||||||||+||.+|++ .|++ |+|+|+++..... ++.. .+.++... ........+
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~---V~viEk~~~~GG~-------~~~~--~~~~~~~~------l~~~~~~~~ 126 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLK---VCIIESSVAPGGG-------SWLG--GQLFSAMV------MRKPAHLFL 126 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSC---EEEECSSSSCCTT-------TTCC--STTCCCEE------EETTTHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCe---EEEEECCCCCCce-------EEeC--CccCCHHH------HHHHHHHHH
Confidence 5799999999999999999975 4777 9999998653211 1111 11111111 113455677
Q ss_pred HHcCcEEEcCCeEEEEeCCCCEEEcCCCcEEecCEEEEccCCCccccccccccccCccccccccCCcccccccccCCCCC
Q 012545 83 KEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVE 162 (461)
Q Consensus 83 ~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 162 (461)
++.|+++..+.. .....+..+++++..+..+.+||.... .
T Consensus 127 ~e~Gv~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~g~~~~------------------------~ 166 (326)
T 3fpz_A 127 QELEIPYEDEGD----------------YVVVKHAALFISTVLSKVLQLPNVKLF------------------------N 166 (326)
T ss_dssp HHTTCCCEECSS----------------EEEESCHHHHHHHHHHHHHTSTTEEEE------------------------T
T ss_pred HHcCCEEEECCc----------------ceecceeEEEEcchhhhccccccceee------------------------c
Confidence 788887665421 123344445566665544444443210 0
Q ss_pred CCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHHHH
Q 012545 163 GADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYY 242 (461)
Q Consensus 163 g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l 242 (461)
+............ ....++++++|+|.++++.|..+...+.+++++.+........ . +
T Consensus 167 ~~~~~~~~~~~~~-----------~~~~~~v~viggg~~av~~a~~~~~~~~~v~i~~~~~~~~~~~-~----------~ 224 (326)
T 3fpz_A 167 ATCVEDLVTRPPT-----------EKGEVTVAGVVTNWTLVTQAHGTQCAMDPNVIELAGYKNDGTR-D----------L 224 (326)
T ss_dssp TEEEEEEEEESSC-----------SSSSCEEEEEEEEEHHHHTCTTSSSCCCCEEEEESCBCTTSSB-C----------T
T ss_pred ccccceeeccCCc-----------ccCCCEEEEEccCceeeehhhhhhhccCcEEEEeecccccccc-c----------c
Confidence 0000001111100 0146789999999999999999999999999887655432210 0 0
Q ss_pred HhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChhhhhcccccCCCcEEeCCCCCCCCCCEEEe
Q 012545 243 ANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDFFKTSADDVYAV 322 (461)
Q Consensus 243 ~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~~~~~~~~~~~g~i~vd~~~~t~~~~vya~ 322 (461)
... . ..+..... .++.. . .......+.+|.+..+.|.+|..... ..+.|.+|+.++|+.|+|||+
T Consensus 225 ~~~-~-----~~~~~~~g-~~~~~-~-~~~~~~~~~~~~~~~~~g~~~~~~~~------~e~~iv~~~~~~t~vpGv~aa 289 (326)
T 3fpz_A 225 SQK-H-----GVILSTTG-HDGPF-G-AFCAKRIVDIDQNQKLGGMKGLDMNH------AEHDVVIHSGAYAGVDNMYFA 289 (326)
T ss_dssp TSC-C-----CEEEECCC-SCSSS-C-SHHHHHHHHHCTTCCCCCCCCBCHHH------HHHHHHHHCEECTTSBTEEEC
T ss_pred eee-c-----ceEEEEec-ceeeE-e-ecceeEEEecCceeeecceecccccc------cCCeEEECCCeEECCCCEEEE
Confidence 000 0 01111111 11100 0 00011235566677777777644322 234677788899999999999
Q ss_pred CcccccCccccCcceeeccHHHHHHHHHHHHHHHhcc
Q 012545 323 GDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMAT 359 (461)
Q Consensus 323 GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 359 (461)
||+++......+. -+....+..+|+.||+.|+..
T Consensus 290 GDaa~~v~g~~rm---Gp~~g~mi~SG~~AAe~I~~~ 323 (326)
T 3fpz_A 290 GMEVAELDGLNRM---GPTFGAMALSGVHAAEQILKH 323 (326)
T ss_dssp THHHHHHHTCCBC---CSCCHHHHHHHHHHHHHHHHH
T ss_pred chHhccccCCCcC---chHHHHHHHHHHHHHHHHHHH
Confidence 9998643221110 023344567899999998754
No 99
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.37 E-value=6.9e-13 Score=132.77 Aligned_cols=94 Identities=19% Similarity=0.237 Sum_probs=73.3
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccC--------CCCChhhhhcc-cc-
Q 012545 231 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVG--------GRPLISLFKGQ-VA- 300 (461)
Q Consensus 231 ~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G--------~~p~~~~~~~~-~~- 300 (461)
+..+...+.+.+++.| +++++++|++|+.++++ ..|++.+|+++.||.||+|+| +.|+++..... +.
T Consensus 203 ~~g~~~l~~~~~~~~g-~i~~~~~V~~i~~~~~~--v~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~ 279 (431)
T 3k7m_X 203 SNGSADLVDAMSQEIP-EIRLQTVVTGIDQSGDV--VNVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEE 279 (431)
T ss_dssp TTCTHHHHHHHHTTCS-CEESSCCEEEEECSSSS--EEEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHH
T ss_pred CCcHHHHHHHHHhhCC-ceEeCCEEEEEEEcCCe--EEEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHh
Confidence 4445666667777778 99999999999874333 468889998899999999999 88887654322 11
Q ss_pred -cCCCcEEeCCCCCCCCCCEEEeCcccc
Q 012545 301 -ENKGGIETDDFFKTSADDVYAVGDVAT 327 (461)
Q Consensus 301 -~~~g~i~vd~~~~t~~~~vya~GD~~~ 327 (461)
.....++|+..++|+.+++|+.||+..
T Consensus 280 ~~~~~~~kv~~~~~~~~~~i~~~~d~~~ 307 (431)
T 3k7m_X 280 GHGGQGLKILIHVRGAEAGIECVGDGIF 307 (431)
T ss_dssp CCCCCEEEEEEEEESCCTTEEEEBSSSS
T ss_pred CCCcceEEEEEEECCCCcCceEcCCCCE
Confidence 234569999999999999999999854
No 100
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.33 E-value=8.7e-12 Score=128.40 Aligned_cols=158 Identities=16% Similarity=0.207 Sum_probs=91.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCC-CCCCCCcccccccCCC----CCCCCCC------------c
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV-APYERPALSKAYLFPE----GTARLPG------------F 66 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~-~~~~~~~~~~~~~~~~----~~~~~~~------------~ 66 (461)
..+||||||||+||++||..|++.|.+ |+|+|++.. .....|..+.+..... ....+.+ +
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~k---VlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f 103 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQ---TLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQF 103 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCC---EEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccch
Confidence 468999999999999999999999987 999999842 2211121111100000 0000000 0
Q ss_pred eeec---CC------------CCCCCCHhHHHH-cCcEEEcCCeEEEEeCCCC---EEEcCCCcEEecCEEEEccCCCcc
Q 012545 67 HVCV---GS------------GGERLLPEWYKE-KGIELILSTEIVRADIASK---TLLSATGLIFKYQILVIATGSTVS 127 (461)
Q Consensus 67 ~~~~---~~------------~~~~~~~~~~~~-~~v~~~~~~~v~~i~~~~~---~v~~~~~~~~~~d~liiAtG~~~~ 127 (461)
.... +. .....+.+.+++ .|++++. ++|..+..+.. .|.+.+|.++.+|.||+|||+.+.
T Consensus 104 ~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~-~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 104 RILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQ-QAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp EEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTC
T ss_pred hhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEE-EEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCcc
Confidence 0000 00 000112234445 5899965 58999876544 356677888999999999999884
Q ss_pred ccccccccccCccccccccCCcccccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHH
Q 012545 128 ITSLTSIRSKHCLCCFFLRTLPLFQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSA 207 (461)
Q Consensus 128 ~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~ 207 (461)
.+.+ +|... . .+.+ +| +.++.+++.
T Consensus 183 ~~~i------------------------------~G~~~--------~-------------~~gr---iG-g~~a~eLA~ 207 (651)
T 3ces_A 183 GKIH------------------------------IGLDN--------Y-------------SGGR---AG-DPPSIPLSR 207 (651)
T ss_dssp CEEE------------------------------CC--------------------------------------CCHHHH
T ss_pred Cccc------------------------------cCccc--------C-------------CCCC---cc-chhhhHHHH
Confidence 3322 22210 0 1223 45 788999999
Q ss_pred HHHHCCCcEEEEc
Q 012545 208 ALKINNIDVSMVY 220 (461)
Q Consensus 208 ~l~~~g~~Vtli~ 220 (461)
.|.+.|.+|+.+.
T Consensus 208 ~L~~lG~~v~~~~ 220 (651)
T 3ces_A 208 RLRELPLRVGRLK 220 (651)
T ss_dssp HHHTTTCCEEEEC
T ss_pred HHHhcCCeEEEec
Confidence 9999999998875
No 101
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.30 E-value=6.1e-12 Score=118.60 Aligned_cols=167 Identities=15% Similarity=0.095 Sum_probs=116.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC-CCcEEEEccCCccCCcc-------------------------------------cC
Q 012545 190 NGKAVVVGGGYIGLELSAALKIN-NIDVSMVYPEPWCMPRL-------------------------------------FT 231 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~-g~~Vtli~~~~~~~~~~-------------------------------------~~ 231 (461)
...|+|||+|++|+.+|..|++. |.+|+++++.+.+.... ..
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 118 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHA 118 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCH
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCH
Confidence 35799999999999999999997 99999999887542110 12
Q ss_pred HHHHHHHHHHHHh-cCcEEEcCCcEEEEEecCCCCEEEEEeC---------CC-----cEEecCEEEEccCCCCChhhh-
Q 012545 232 ADIAAFYEGYYAN-KGIKIIKGTVAVGFTTNADGEVKEVKLK---------DG-----RTLEADIVVVGVGGRPLISLF- 295 (461)
Q Consensus 232 ~~~~~~~~~~l~~-~GV~v~~~~~v~~i~~~~~g~~~~v~~~---------~G-----~~i~aD~vi~a~G~~p~~~~~- 295 (461)
.++...+.+.+.+ .|++++++++|+++.. +++.+..+.+. +| .++.+|.||+|+|..++....
T Consensus 119 ~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~-~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~ 197 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPNVKLFNAVAAEDLIV-KGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATG 197 (284)
T ss_dssp HHHHHHHHHHHHTSTTEEEEETEEEEEEEE-ETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHH
T ss_pred HHHHHHHHHHHHhcCCCEEEcCcEEEEEEe-cCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHH
Confidence 3455566666655 6999999999999986 34555566553 32 579999999999987765322
Q ss_pred -----hcc--ccc-CCCcEEeCC-------CCCCCCCCEEEeCcccccCccccCcceeeccHHHHHHHHHHHHHHHhccc
Q 012545 296 -----KGQ--VAE-NKGGIETDD-------FFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATE 360 (461)
Q Consensus 296 -----~~~--~~~-~~g~i~vd~-------~~~t~~~~vya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 360 (461)
..+ +.. ...++.+|. +.+++.|++|++||++... ++.++..+.+..|..+|+.+|.++...+
T Consensus 198 ~~~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~~~p~i~a~G~~~~~~---~g~~~~gp~~~~~~~sG~~~a~~i~~~l 274 (284)
T 1rp0_A 198 VKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEI---DGAPRMGPTFGAMMISGQKAGQLALKAL 274 (284)
T ss_dssp HHHHHHTTSSSCCCCCEEECHHHHHHHHHHHCEEEETTEEECTHHHHHH---HTCEECCSCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHhhhccCCCCcCCcCCchhhhhhHHHhhccccccCCEEEEeeehhhh---cCCCCcChHHHHHHHhHHHHHHHHHHHh
Confidence 111 111 223444442 3456789999999987431 2222233567788899999999998765
No 102
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.23 E-value=1.3e-10 Score=119.24 Aligned_cols=126 Identities=18% Similarity=0.223 Sum_probs=74.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC-CCCCCCCcccccccCCC----CCCCCCC------------c
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA-VAPYERPALSKAYLFPE----GTARLPG------------F 66 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~-~~~~~~~~~~~~~~~~~----~~~~~~~------------~ 66 (461)
..+||+|||||+||++||..|++.|.+ |+|+|++. ......|..+.+..... ....+.+ +
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~k---VlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f 102 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAK---TAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQF 102 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCC---EEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccce
Confidence 358999999999999999999999987 99999984 22211121111100000 0000000 0
Q ss_pred eeec---CC------------CCCCCCHhHHHH-cCcEEEcCCeEEEEeCCCCE---EEcCCCcEEecCEEEEccCCCcc
Q 012545 67 HVCV---GS------------GGERLLPEWYKE-KGIELILSTEIVRADIASKT---LLSATGLIFKYQILVIATGSTVS 127 (461)
Q Consensus 67 ~~~~---~~------------~~~~~~~~~~~~-~~v~~~~~~~v~~i~~~~~~---v~~~~~~~~~~d~liiAtG~~~~ 127 (461)
.... +. .....+.+.+++ .|++++. .+|+.+..+... |.+.+|.++.+|.+|+|||+.+.
T Consensus 103 ~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~-~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~ 181 (637)
T 2zxi_A 103 KMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQ-EEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLN 181 (637)
T ss_dssp EEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEE-SCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBT
T ss_pred eecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEE-eEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCcc
Confidence 0000 00 000112233444 5899965 589988765543 66778888999999999999885
Q ss_pred cccccc
Q 012545 128 ITSLTS 133 (461)
Q Consensus 128 ~~~~~g 133 (461)
.+.++|
T Consensus 182 ~~~~~G 187 (637)
T 2zxi_A 182 GVIYIG 187 (637)
T ss_dssp CEEEET
T ss_pred Cceecc
Confidence 444444
No 103
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.22 E-value=1.6e-10 Score=112.65 Aligned_cols=59 Identities=15% Similarity=0.259 Sum_probs=49.3
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCC--cEEecCEEEEccCCCC
Q 012545 231 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDG--RTLEADIVVVGVGGRP 290 (461)
Q Consensus 231 ~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G--~~i~aD~vi~a~G~~p 290 (461)
+..+.+.+.+.+++.|++++++++|+++..++++. ..|.+.+| .++.||.||+|+|...
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGG-FELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSS-EEEEECTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCce-EEEEECCCceeEEEeCEEEECCCcch
Confidence 56788888999999999999999999999844443 45888888 4899999999999764
No 104
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.15 E-value=5e-11 Score=104.18 Aligned_cols=114 Identities=19% Similarity=0.225 Sum_probs=77.1
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCcee-ecCCCCCCCCHhHHHH
Q 012545 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHV-CVGSGGERLLPEWYKE 84 (461)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 84 (461)
+|++|||||++|+.+|..|++.|.+ |+|+|+.+..... . .....++++.. ..+......+.+.+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~---v~lie~~~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 68 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLK---VLVLDGGRSKVKG-V---------SRVPNYPGLLDEPSGEELLRRLEAHARR 68 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEEECSCCTTTT-C---------SCCCCSTTCTTCCCHHHHHHHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCc---EEEEeCCCCcccC-c---------hhhhccCCCcCCCCHHHHHHHHHHHHHH
Confidence 6999999999999999999999886 9999998632111 0 00111122100 0000112234556677
Q ss_pred cCcEEEcCCeEEEEeCCCC--EEEcCCCcEEecCEEEEccCCCccccccccc
Q 012545 85 KGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVSITSLTSI 134 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~ 134 (461)
.+++++.+ ++.+++.++. .+.+.++ ++++|.+|+|+|..|.+++..|+
T Consensus 69 ~gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~~~~~~g~ 118 (180)
T 2ywl_A 69 YGAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPTLPSLLGL 118 (180)
T ss_dssp TTCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCHHHHHHTC
T ss_pred cCCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCCccccCCC
Confidence 89999999 9998876543 5677777 79999999999999855443443
No 105
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.15 E-value=3e-11 Score=125.47 Aligned_cols=39 Identities=31% Similarity=0.256 Sum_probs=34.0
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHHcC--CCCCcEEEEeCCCC
Q 012545 1 MAEKSFKYVILGGGVSAGYAAREFAKQG--VKPGELAIISKEAV 42 (461)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~L~~~g--~~~~~V~vie~~~~ 42 (461)
|....+||||||||+||++||..|++.| .+ |+|+||.+.
T Consensus 1 m~~~~~DVvIVG~G~AGl~aAl~la~~G~~~~---V~vlEk~~~ 41 (602)
T 1kf6_A 1 MQTFQADLAIVGAGGAGLRAAIAAAQANPNAK---IALISKVYP 41 (602)
T ss_dssp CEEEECSEEEECCSHHHHHHHHHHHHHCTTCC---EEEEESSCG
T ss_pred CCcccCCEEEECCCHHHHHHHHHHHhcCCCCc---EEEEeCCCC
Confidence 4345689999999999999999999998 76 999999853
No 106
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.12 E-value=2.7e-09 Score=104.86 Aligned_cols=36 Identities=33% Similarity=0.533 Sum_probs=33.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~ 42 (461)
++|||+||||||||+++|..|+++|++ |+|+|+.+.
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~G~~---V~v~Er~~~ 38 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLK---TLMIEKRPE 38 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCc---EEEEeCCCC
Confidence 579999999999999999999999998 999999864
No 107
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.06 E-value=1.7e-10 Score=114.39 Aligned_cols=121 Identities=22% Similarity=0.285 Sum_probs=72.9
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCC-------CCCccc------ccccCCCCCCCCC---
Q 012545 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPY-------ERPALS------KAYLFPEGTARLP--- 64 (461)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~-------~~~~~~------~~~~~~~~~~~~~--- 64 (461)
||++.+||+|||||+||++||..|++.|.+ |+|+|+.+.... .++.+. ..++.. ......
T Consensus 23 M~~~~~dViIIGgG~AGl~aA~~La~~G~~---V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~-~~~~~~~~l 98 (417)
T 3v76_A 23 MVAEKQDVVIIGAGAAGMMCAIEAGKRGRR---VLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSG-NPHFCKSAL 98 (417)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEES-STTTTHHHH
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHHCCCc---EEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhc-CHHHHHHHH
Confidence 666789999999999999999999999987 999999875321 011110 000000 000000
Q ss_pred ---------------Ccee-------ecCC----CCCCCCHhHHHHcCcEEEcCCeEEEEeCCCC--EEEcCCCcEEecC
Q 012545 65 ---------------GFHV-------CVGS----GGERLLPEWYKEKGIELILSTEIVRADIASK--TLLSATGLIFKYQ 116 (461)
Q Consensus 65 ---------------~~~~-------~~~~----~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d 116 (461)
+... .+.. .....+.+.+++.|++++.+++|.++..++. .|.+.++ ++.+|
T Consensus 99 ~~~~~~~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad 177 (417)
T 3v76_A 99 ARYRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAA 177 (417)
T ss_dssp HHSCHHHHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEES
T ss_pred HhcCHHHHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEee
Confidence 0000 0000 0011233345567999999999999976554 4556666 79999
Q ss_pred EEEEccCCCc
Q 012545 117 ILVIATGSTV 126 (461)
Q Consensus 117 ~liiAtG~~~ 126 (461)
+||+|+|..+
T Consensus 178 ~VIlAtG~~S 187 (417)
T 3v76_A 178 SLVVASGGKS 187 (417)
T ss_dssp EEEECCCCSS
T ss_pred EEEECCCCcc
Confidence 9999999876
No 108
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.03 E-value=1.3e-09 Score=109.00 Aligned_cols=58 Identities=19% Similarity=0.260 Sum_probs=50.5
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCC---cEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCC
Q 012545 231 TADIAAFYEGYYANKGIKIIKGT---VAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGR 289 (461)
Q Consensus 231 ~~~~~~~~~~~l~~~GV~v~~~~---~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~ 289 (461)
+..+.+.+.+.+++.|+++++++ +|+++.. +++.+.+|++.+|+++.||.||+|+|..
T Consensus 160 ~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~-~~~~v~gV~t~~G~~i~Ad~VV~AtG~~ 220 (438)
T 3dje_A 160 ARNALVAAAREAQRMGVKFVTGTPQGRVVTLIF-ENNDVKGAVTADGKIWRAERTFLCAGAS 220 (438)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEE-ETTEEEEEEETTTEEEECSEEEECCGGG
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEe-cCCeEEEEEECCCCEEECCEEEECCCCC
Confidence 45778888899999999999999 9999987 3566667999999899999999999964
No 109
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.02 E-value=2.8e-09 Score=104.62 Aligned_cols=58 Identities=22% Similarity=0.321 Sum_probs=49.0
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCC
Q 012545 231 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRP 290 (461)
Q Consensus 231 ~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p 290 (461)
+..+.+.+.+.+++.|++++.+++|+++..+ ++.+..|++.+| ++.||.||+|+|...
T Consensus 148 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~-~~~v~gv~~~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 148 PFEATTAFAVKAKEYGAKLLEYTEVKGFLIE-NNEIKGVKTNKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEECCceEEEEEEE-CCEEEEEEECCc-EEECCEEEECcchhH
Confidence 4567788888999999999999999999873 455656888888 899999999999764
No 110
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.96 E-value=2e-09 Score=109.72 Aligned_cols=58 Identities=16% Similarity=0.224 Sum_probs=50.9
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCC
Q 012545 231 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGR 289 (461)
Q Consensus 231 ~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~ 289 (461)
...+.+.+.+.+++.|++|+++++|++|.. +++++..|+++||+++.||.||++++..
T Consensus 220 ~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~-~~~~~~gV~~~~g~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 220 TGALVQGMIKLFQDLGGEVVLNARVSHMET-TGNKIEAVHLEDGRRFLTQAVASNADVV 277 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTSCEEECSCEEECCC--
T ss_pred CcchHHHHHHHHHHhCCceeeecceeEEEe-eCCeEEEEEecCCcEEEcCEEEECCCHH
Confidence 457888899999999999999999999997 5778889999999999999999988754
No 111
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.96 E-value=1.5e-10 Score=117.81 Aligned_cols=105 Identities=21% Similarity=0.273 Sum_probs=81.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCc----cc----------------------------CHHHHH
Q 012545 189 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR----LF----------------------------TADIAA 236 (461)
Q Consensus 189 ~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~----~~----------------------------~~~~~~ 236 (461)
...+|+|||+|+.|+.+|..|++.|.+|+++++.+.+... .. ..++.+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~ 170 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQL 170 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHH
Confidence 3568999999999999999999999999999988654210 00 146667
Q ss_pred HHHHHHHhcCcEEEcCCcEEEEEecC-CCCEEEEEe--C-CC--cEEecCEEEEccCCCCChh
Q 012545 237 FYEGYYANKGIKIIKGTVAVGFTTNA-DGEVKEVKL--K-DG--RTLEADIVVVGVGGRPLIS 293 (461)
Q Consensus 237 ~~~~~l~~~GV~v~~~~~v~~i~~~~-~g~~~~v~~--~-~G--~~i~aD~vi~a~G~~p~~~ 293 (461)
.+.+.+++.|++++++++|+++..++ ++....|++ . +| .++.+|.||.|+|..+...
T Consensus 171 ~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r 233 (497)
T 2bry_A 171 LLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVPE 233 (497)
T ss_dssp HHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCCT
T ss_pred HHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcccc
Confidence 78888888999999999999998632 233345666 4 66 5799999999999887654
No 112
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.94 E-value=1.3e-09 Score=99.37 Aligned_cols=115 Identities=17% Similarity=0.141 Sum_probs=70.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCC-CCceeecCC---CCCCCCHh
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARL-PGFHVCVGS---GGERLLPE 80 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~ 80 (461)
.+||+|||||++|+++|..|++.|.+ |+|+|+....... .+. .. ........+ ..+....+. .....+.+
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~---v~lie~~~~~~G~-~~~-~~-~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~ 76 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVR---VGLLTQSLDAVMM-PFL-PP-KPPFPPGSLLERAYDPKDERVWAFHARAKY 76 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESCGGGTTC-CSS-CC-CSCCCTTCHHHHHCCTTCCCHHHHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC---EEEEecCCCcCCc-ccC-cc-ccccchhhHHhhhccCCCCCHHHHHHHHHH
Confidence 68999999999999999999999987 9999998321100 000 00 000000000 000000000 00112334
Q ss_pred HHHHc-CcEEEcCCeEEEEeCCCCE---EEcCCCcEEecCEEEEccCCCc
Q 012545 81 WYKEK-GIELILSTEIVRADIASKT---LLSATGLIFKYQILVIATGSTV 126 (461)
Q Consensus 81 ~~~~~-~v~~~~~~~v~~i~~~~~~---v~~~~~~~~~~d~liiAtG~~~ 126 (461)
.+++. +++++. ++|+++..+... +.+.+++++++|.+|+|+|...
T Consensus 77 ~~~~~~gv~i~~-~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s 125 (232)
T 2cul_A 77 LLEGLRPLHLFQ-ATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFL 125 (232)
T ss_dssp HHHTCTTEEEEE-CCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCS
T ss_pred HHHcCCCcEEEE-eEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 45555 999885 589988765443 5667787899999999999876
No 113
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.88 E-value=3.4e-09 Score=103.99 Aligned_cols=118 Identities=19% Similarity=0.231 Sum_probs=76.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcc--c-------------ccccCCCCCCCCCCcee
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPAL--S-------------KAYLFPEGTARLPGFHV 68 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~--~-------------~~~~~~~~~~~~~~~~~ 68 (461)
+.+||+|||||++|+++|..|++.|++ |+|+|+.+......... . ..+... ......+..
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~---v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~--~~~~~~~~~ 84 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWD---VRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQG--SHTPPTYET 84 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTT--CBCCSCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCC---EEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhh--CCCccceEE
Confidence 358999999999999999999999987 99999986532110000 0 000000 000000000
Q ss_pred ec-----------CC--------CCCCCCHhHHHHcCcEEEcCCeEEEEeCCCCEEEcCCCcEEecCEEEEccCCCcc
Q 012545 69 CV-----------GS--------GGERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVS 127 (461)
Q Consensus 69 ~~-----------~~--------~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~liiAtG~~~~ 127 (461)
.. +. .....+.+.+.+.|++++.+++|++++.+. .|.+.+|+++.+|.||.|+|..+.
T Consensus 85 ~~~g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-~v~~~~g~~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 85 WMHNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVG-RLTLQTGEVLEADLIVGADGVGSK 161 (379)
T ss_dssp EETTEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTT-EEEETTSCEEECSEEEECCCTTCH
T ss_pred EeCCceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCC-EEEECCCCEEEcCEEEECCCccHH
Confidence 00 00 001123344556799999999999998755 888888888999999999998873
No 114
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.87 E-value=3.4e-09 Score=105.39 Aligned_cols=127 Identities=16% Similarity=0.224 Sum_probs=74.6
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCC-ccccc---ccCCCC------CCCC---CCce
Q 012545 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERP-ALSKA---YLFPEG------TARL---PGFH 67 (461)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~-~~~~~---~~~~~~------~~~~---~~~~ 67 (461)
|+++.+||+|||||++|+++|..|++.|++ |+|+|+.+...+... .+... ++.... .... .+..
T Consensus 1 M~~~~~dVvIIGgG~aGl~~A~~La~~G~~---V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 77 (421)
T 3nix_A 1 MQREKVDVLVIGAGPAGTVAASLVNKSGFK---VKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAK 77 (421)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHTTTCC---EEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEE
T ss_pred CCCccCcEEEECCCHHHHHHHHHHHhCCCC---EEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcE
Confidence 555679999999999999999999999987 999999864221110 00000 000000 0000 0000
Q ss_pred e---------ecCCC---------------CCCCCHhHHHHcCcEEEcCCeEEEEeCCCCE----EEcCCCc--EEecCE
Q 012545 68 V---------CVGSG---------------GERLLPEWYKEKGIELILSTEIVRADIASKT----LLSATGL--IFKYQI 117 (461)
Q Consensus 68 ~---------~~~~~---------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~----v~~~~~~--~~~~d~ 117 (461)
. ..... ....+.+.+++.|++++.+++|++++.+... +.+.+|+ ++.+|.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~ 157 (421)
T 3nix_A 78 FVRGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARF 157 (421)
T ss_dssp EEETTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEE
T ss_pred EEeCCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCE
Confidence 0 00000 0011223344569999999999998765432 3446776 699999
Q ss_pred EEEccCCCccccc
Q 012545 118 LVIATGSTVSITS 130 (461)
Q Consensus 118 liiAtG~~~~~~~ 130 (461)
+|.|+|....++.
T Consensus 158 vV~A~G~~s~l~~ 170 (421)
T 3nix_A 158 IIDASGYGRVIPR 170 (421)
T ss_dssp EEECCGGGCHHHH
T ss_pred EEECCCCchhhHH
Confidence 9999998774433
No 115
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.87 E-value=5.1e-09 Score=107.25 Aligned_cols=50 Identities=14% Similarity=0.072 Sum_probs=38.8
Q ss_pred HHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCC
Q 012545 238 YEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGR 289 (461)
Q Consensus 238 ~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~ 289 (461)
+....++.|++++++++|++|..+ ++.+ .|++.+|+++.||.||+|++..
T Consensus 218 ~~~l~~~lg~~i~~~~~V~~i~~~-~~~v-~v~~~~g~~~~ad~VI~a~p~~ 267 (520)
T 1s3e_A 218 SERIMDLLGDRVKLERPVIYIDQT-RENV-LVETLNHEMYEAKYVISAIPPT 267 (520)
T ss_dssp HHHHHHHHGGGEESSCCEEEEECS-SSSE-EEEETTSCEEEESEEEECSCGG
T ss_pred HHHHHHHcCCcEEcCCeeEEEEEC-CCeE-EEEECCCeEEEeCEEEECCCHH
Confidence 333344448899999999999873 3444 4888999999999999999853
No 116
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.87 E-value=3.4e-09 Score=104.72 Aligned_cols=124 Identities=15% Similarity=0.170 Sum_probs=73.2
Q ss_pred CCC-CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCc--ccc---cccCCC--------CCCCCCCc
Q 012545 1 MAE-KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPA--LSK---AYLFPE--------GTARLPGF 66 (461)
Q Consensus 1 Mm~-~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~--~~~---~~~~~~--------~~~~~~~~ 66 (461)
||+ +.+||+|||||++|+++|..|++.|++ |+|+|+.+........ +.. ..+... .......+
T Consensus 1 ~M~~~~~dVvIVGaG~aGl~~A~~L~~~G~~---V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~ 77 (399)
T 2x3n_A 1 GMTDNHIDVLINGCGIGGAMLAYLLGRQGHR---VVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHE 77 (399)
T ss_dssp ----CEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECE
T ss_pred CCCCCcCCEEEECcCHHHHHHHHHHHhCCCc---EEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCccee
Confidence 454 458999999999999999999999987 9999998653111100 000 000000 00000000
Q ss_pred e---------eecCCC---------------CCCCCHhHHHHc-CcEEEcCCeEEEEeCCCC----EEEcCCCcEEecCE
Q 012545 67 H---------VCVGSG---------------GERLLPEWYKEK-GIELILSTEIVRADIASK----TLLSATGLIFKYQI 117 (461)
Q Consensus 67 ~---------~~~~~~---------------~~~~~~~~~~~~-~v~~~~~~~v~~i~~~~~----~v~~~~~~~~~~d~ 117 (461)
. ..+... ....+.+.+++. |++++.+++|++++.+.. .+.+.+|+++++|.
T Consensus 78 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~ 157 (399)
T 2x3n_A 78 LEVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRV 157 (399)
T ss_dssp EEEEETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred EEEeCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCE
Confidence 0 000000 000112223344 899999999999976543 56777888899999
Q ss_pred EEEccCCCcc
Q 012545 118 LVIATGSTVS 127 (461)
Q Consensus 118 liiAtG~~~~ 127 (461)
||.|+|....
T Consensus 158 vV~AdG~~s~ 167 (399)
T 2x3n_A 158 VVGADGIASY 167 (399)
T ss_dssp EEECCCTTCH
T ss_pred EEECCCCChH
Confidence 9999998773
No 117
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.87 E-value=2.4e-08 Score=102.84 Aligned_cols=61 Identities=25% Similarity=0.451 Sum_probs=51.5
Q ss_pred CHHHHHHHHHHHHhc-CcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCCh
Q 012545 231 TADIAAFYEGYYANK-GIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 292 (461)
Q Consensus 231 ~~~~~~~~~~~l~~~-GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~ 292 (461)
...+.+.+.+.+++. ||+++.+ +|+++..++++.+..|++.+|+++.+|.||.|+|.....
T Consensus 193 ~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~ 254 (550)
T 2e4g_A 193 AHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLL 254 (550)
T ss_dssp HHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCC
T ss_pred HHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhh
Confidence 346778888888888 9999999 999998755677778999999899999999999976543
No 118
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.86 E-value=2.1e-08 Score=99.02 Aligned_cols=58 Identities=24% Similarity=0.350 Sum_probs=49.5
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCC
Q 012545 231 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRP 290 (461)
Q Consensus 231 ~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p 290 (461)
+..+.+.+.+.+++.|++++.+++|+++.. +++.+..|++.+| ++.+|.||+|+|...
T Consensus 173 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~-~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 173 HDHVAWAFARKANEMGVDIIQNCEVTGFIK-DGEKVTGVKTTRG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-SSSBEEEEEETTC-CEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEE-eCCEEEEEEeCCc-eEECCEEEECCchhH
Confidence 447788888999999999999999999987 3556667888888 799999999999765
No 119
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.85 E-value=4.4e-09 Score=103.87 Aligned_cols=123 Identities=13% Similarity=0.063 Sum_probs=74.7
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCC-c--ccc---------cccCCCCCCCCCCcee
Q 012545 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERP-A--LSK---------AYLFPEGTARLPGFHV 68 (461)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~-~--~~~---------~~~~~~~~~~~~~~~~ 68 (461)
|+++.+||+|||||++|+++|..|++.|++ |+|+|+.+.....+. . +.. ++..............
T Consensus 1 M~~~~~~V~IVGaG~aGl~~A~~L~~~G~~---v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~ 77 (397)
T 2vou_A 1 MSPTTDRIAVVGGSISGLTAALMLRDAGVD---VDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEY 77 (397)
T ss_dssp -CCCCSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEE
T ss_pred CCCCCCcEEEECCCHHHHHHHHHHHhCCCC---EEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEE
Confidence 666789999999999999999999999987 999999865211100 0 000 0000000000000000
Q ss_pred ecC-CC---------C-C---CCCHhHHHH--cCcEEEcCCeEEEEeCCCC--EEEcCCCcEEecCEEEEccCCCc
Q 012545 69 CVG-SG---------G-E---RLLPEWYKE--KGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTV 126 (461)
Q Consensus 69 ~~~-~~---------~-~---~~~~~~~~~--~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~liiAtG~~~ 126 (461)
... .. . . ..+.+.+.+ .+++++.+++|+++..+.. .+.+.+|+++.+|.||.|+|...
T Consensus 78 ~~~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S 153 (397)
T 2vou_A 78 VDALTGERVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGAS 153 (397)
T ss_dssp EETTTCCEEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTC
T ss_pred EecCCCCccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcch
Confidence 000 00 0 0 011222222 3889999999999976554 46677888899999999999876
No 120
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.81 E-value=1.1e-08 Score=105.31 Aligned_cols=119 Identities=13% Similarity=0.204 Sum_probs=71.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCC-CCCCCCccccccc-----------CCCC------------
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV-APYERPALSKAYL-----------FPEG------------ 59 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~-~~~~~~~~~~~~~-----------~~~~------------ 59 (461)
..+||+|||||+||++||..|++.|.+ |+|+|+... .....|..+.+.. ....
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~k---VlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f 96 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLH---CLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQF 96 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCc---EEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCch
Confidence 468999999999999999999999987 999999842 1111111111000 0000
Q ss_pred ----CCCCCCcee---ecCC-CCCCCCHhHHHH-cCcEEEcCCeEEEEeCCCCE---EEcCCCcEEecCEEEEccCCCc
Q 012545 60 ----TARLPGFHV---CVGS-GGERLLPEWYKE-KGIELILSTEIVRADIASKT---LLSATGLIFKYQILVIATGSTV 126 (461)
Q Consensus 60 ----~~~~~~~~~---~~~~-~~~~~~~~~~~~-~~v~~~~~~~v~~i~~~~~~---v~~~~~~~~~~d~liiAtG~~~ 126 (461)
...-+.... .... .....+.+.+++ .+++++.+ .|..+..+... |.+.+|.++.+|.+|+|||+.+
T Consensus 97 ~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~-~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s 174 (641)
T 3cp8_A 97 RMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQD-TVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFL 174 (641)
T ss_dssp EEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEEC-CEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCB
T ss_pred hhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEee-EEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCC
Confidence 000000000 0000 000112233444 48998765 88887765543 5667888899999999999987
No 121
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.80 E-value=1.4e-08 Score=101.90 Aligned_cols=59 Identities=22% Similarity=0.369 Sum_probs=48.7
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCcEEEEEec--------------CCCCEEEEEeCCCcEE--ecCEEEEccCCCC
Q 012545 231 TADIAAFYEGYYANKGIKIIKGTVAVGFTTN--------------ADGEVKEVKLKDGRTL--EADIVVVGVGGRP 290 (461)
Q Consensus 231 ~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~--------------~~g~~~~v~~~~G~~i--~aD~vi~a~G~~p 290 (461)
+..+.+.+.+.+++.|++++.+++|+++..+ +++.+..|.+.+| ++ .||.||+|+|...
T Consensus 180 ~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s 254 (448)
T 3axb_A 180 AEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWS 254 (448)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCH
Confidence 4578888999999999999999999999862 2445567888888 68 9999999999653
No 122
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.79 E-value=1e-07 Score=100.74 Aligned_cols=58 Identities=12% Similarity=0.137 Sum_probs=49.1
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCC
Q 012545 231 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRP 290 (461)
Q Consensus 231 ~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p 290 (461)
+..+.+.+.+.+++.|++++++++|+++..++ +. ..|++.+|.++.+|.||+|+|...
T Consensus 416 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~-~~-v~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 416 PAELTRNVLELAQQQGLQIYYQYQLQNFSRKD-DC-WLLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEET-TE-EEEEETTSCEEEESEEEECCGGGG
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeC-Ce-EEEEECCCCEEECCEEEECCCcch
Confidence 46778888899999999999999999998743 33 478888888999999999999653
No 123
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.79 E-value=1.1e-08 Score=105.27 Aligned_cols=39 Identities=21% Similarity=0.435 Sum_probs=35.9
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 012545 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (461)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~ 42 (461)
|++..+||+|||||++|+++|+.|+++|.+ |+|||+.+.
T Consensus 1 M~~~~~dVlIVGaG~aGl~~A~~La~~G~~---v~viEr~~~ 39 (535)
T 3ihg_A 1 MNDHEVDVLVVGAGLGGLSTAMFLARQGVR---VLVVERRPG 39 (535)
T ss_dssp CCCCSEEEEEECCSHHHHHHHHHHHTTTCC---EEEECSSSS
T ss_pred CCCccCcEEEECcCHHHHHHHHHHHHCCCC---EEEEeCCCC
Confidence 666789999999999999999999999987 999999865
No 124
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.78 E-value=1.6e-11 Score=127.89 Aligned_cols=54 Identities=17% Similarity=0.310 Sum_probs=43.2
Q ss_pred HhcCcEEEcCCcEEEEEecCC-CCEEEEEeC---CCc--EEecCEEEEccCCCCChhhhh
Q 012545 243 ANKGIKIIKGTVAVGFTTNAD-GEVKEVKLK---DGR--TLEADIVVVGVGGRPLISLFK 296 (461)
Q Consensus 243 ~~~GV~v~~~~~v~~i~~~~~-g~~~~v~~~---~G~--~i~aD~vi~a~G~~p~~~~~~ 296 (461)
++.|+++++++.|++|..+++ +++.+|++. +|+ ++.||.||+|+|..|+..++.
T Consensus 271 ~~~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~ 330 (623)
T 3pl8_A 271 PEERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLV 330 (623)
T ss_dssp EEEEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHH
T ss_pred cCCCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHH
Confidence 345899999999999987433 367777774 354 688999999999999998774
No 125
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.78 E-value=7.9e-08 Score=94.29 Aligned_cols=72 Identities=17% Similarity=0.274 Sum_probs=55.3
Q ss_pred CcEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCC
Q 012545 214 IDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPL 291 (461)
Q Consensus 214 ~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~ 291 (461)
..+.++.+....+. +..+.+.+.+.+++.|++++.+++|++++.++++ ..|++.+| ++.+|.||+|+|...+
T Consensus 135 ~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~--~~v~~~~g-~~~a~~vV~A~G~~~~ 206 (389)
T 2gf3_A 135 NYNAIFEPNSGVLF---SENCIRAYRELAEARGAKVLTHTRVEDFDISPDS--VKIETANG-SYTADKLIVSMGAWNS 206 (389)
T ss_dssp TEEEEEETTCEEEE---HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSC--EEEEETTE-EEEEEEEEECCGGGHH
T ss_pred CceEEEeCCCcEEe---HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCe--EEEEeCCC-EEEeCEEEEecCccHH
Confidence 45566665554432 4678888899999999999999999999874333 45777766 7999999999997643
No 126
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.77 E-value=1.2e-08 Score=104.22 Aligned_cols=119 Identities=17% Similarity=0.197 Sum_probs=73.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCC--------------CC---CCcc--cc-cccCCCCC-CCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP--------------YE---RPAL--SK-AYLFPEGT-ARL 63 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~--------------~~---~~~~--~~-~~~~~~~~-~~~ 63 (461)
.+||||||||++|++||+.|++.|++ |+|+|+.+... +. .... .. +.+..... ..+
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~k---V~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i 183 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFN---PIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQV 183 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCC---CEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCe---EEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEe
Confidence 48999999999999999999999987 99999985310 00 0000 00 00000000 000
Q ss_pred --CCce--------eecCCC------------------CCCCCHhHHHHcCcEEEcCCeEEEEeCCCC---EEEcCCCcE
Q 012545 64 --PGFH--------VCVGSG------------------GERLLPEWYKEKGIELILSTEIVRADIASK---TLLSATGLI 112 (461)
Q Consensus 64 --~~~~--------~~~~~~------------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~---~v~~~~~~~ 112 (461)
+.+. ...+.. ....+.+.+++.|++++.+++|+++..+.. .|.+.++++
T Consensus 184 ~~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~ 263 (549)
T 3nlc_A 184 KDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEE 263 (549)
T ss_dssp CCTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCE
T ss_pred ccccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCE
Confidence 0000 000000 001123344568999999999999986654 367788888
Q ss_pred EecCEEEEccCCCc
Q 012545 113 FKYQILVIATGSTV 126 (461)
Q Consensus 113 ~~~d~liiAtG~~~ 126 (461)
+.+|.||+|+|..+
T Consensus 264 i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 264 IKSRHVVLAVGHSA 277 (549)
T ss_dssp EECSCEEECCCTTC
T ss_pred EECCEEEECCCCCh
Confidence 99999999999877
No 127
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.76 E-value=1.6e-08 Score=98.98 Aligned_cols=57 Identities=16% Similarity=0.130 Sum_probs=48.0
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCC
Q 012545 231 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRP 290 (461)
Q Consensus 231 ~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p 290 (461)
+..+.+.+.+.+++.|++++.+++|+++..+++ . ..|++.+| ++.||.||+|+|...
T Consensus 153 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~-~-~~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 153 TDALHQGYLRGIRRNQGQVLCNHEALEIRRVDG-A-WEVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSCCCCEEEEETT-E-EEEECSSE-EEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCC-e-EEEEeCCC-EEEcCEEEECCChhH
Confidence 467788888999999999999999999987433 3 67888888 899999999999653
No 128
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.76 E-value=2.5e-08 Score=99.18 Aligned_cols=61 Identities=18% Similarity=0.233 Sum_probs=49.6
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChhhh
Q 012545 231 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLF 295 (461)
Q Consensus 231 ~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~~~ 295 (461)
...+.+.+.+.+++.|++++++++|++|.. +++.+ | +.+|+++.||.||+|+|......++
T Consensus 188 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~-~~~~v--V-~~~g~~~~ad~Vv~a~~~~~~~~ll 248 (421)
T 3nrn_A 188 CKAVIDELERIIMENKGKILTRKEVVEINI-EEKKV--Y-TRDNEEYSFDVAISNVGVRETVKLI 248 (421)
T ss_dssp HHHHHHHHHHHHHTTTCEEESSCCEEEEET-TTTEE--E-ETTCCEEECSEEEECSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEE-ECCEE--E-EeCCcEEEeCEEEECCCHHHHHHhc
Confidence 577889999999999999999999999987 34443 4 5678899999999999975544444
No 129
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.76 E-value=8e-09 Score=103.67 Aligned_cols=119 Identities=19% Similarity=0.284 Sum_probs=73.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCC-------CCCcccc-----cccCC-CCCCCC--------
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPY-------ERPALSK-----AYLFP-EGTARL-------- 63 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~-------~~~~~~~-----~~~~~-~~~~~~-------- 63 (461)
.+||+|||||++|+++|..|++.|.+ |+|+|+.+...- .++.+.. .++.. .....+
T Consensus 26 ~~dVvIIGgG~aGl~aA~~la~~G~~---V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (447)
T 2i0z_A 26 HYDVIVIGGGPSGLMAAIGAAEEGAN---VLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIF 102 (447)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHS
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCC---EEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhc
Confidence 58999999999999999999999987 999999864210 0111100 00000 000000
Q ss_pred -----------CCce-------eecCC-----CCCCCCHhHHHHcCcEEEcCCeEEEEeCCCC---EEEcCCCcEEecCE
Q 012545 64 -----------PGFH-------VCVGS-----GGERLLPEWYKEKGIELILSTEIVRADIASK---TLLSATGLIFKYQI 117 (461)
Q Consensus 64 -----------~~~~-------~~~~~-----~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~---~v~~~~~~~~~~d~ 117 (461)
.+.. ..+.. .....+.+.+++.|++++.+++|+++..+.. .|.+.+++++.+|.
T Consensus 103 ~~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~ 182 (447)
T 2i0z_A 103 NNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNH 182 (447)
T ss_dssp CHHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSC
T ss_pred CHHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCE
Confidence 0000 00000 0001123344568999999999999875443 36677777799999
Q ss_pred EEEccCCCc
Q 012545 118 LVIATGSTV 126 (461)
Q Consensus 118 liiAtG~~~ 126 (461)
||+|+|..+
T Consensus 183 VVlAtGg~s 191 (447)
T 2i0z_A 183 VVIAVGGKS 191 (447)
T ss_dssp EEECCCCSS
T ss_pred EEECCCCCc
Confidence 999999876
No 130
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.75 E-value=1.8e-08 Score=102.86 Aligned_cols=121 Identities=18% Similarity=0.313 Sum_probs=72.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCC-cc-c---ccccCCCCC------CCCC--------
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERP-AL-S---KAYLFPEGT------ARLP-------- 64 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~-~~-~---~~~~~~~~~------~~~~-------- 64 (461)
+.+||+|||||++|+++|..|++.|++ |+|+|+.+...+... .+ + ..++..... ...+
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G~~---V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~ 82 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRGHR---VLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFR 82 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCC---EEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEE
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCC---EEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEE
Confidence 358999999999999999999999987 999999974221110 00 0 000000000 0000
Q ss_pred ------CceeecC-----CCC----------CCCCHhHHHHcCcEEEcCCeEEEEeCCCCE---EE--cCCCc--EEecC
Q 012545 65 ------GFHVCVG-----SGG----------ERLLPEWYKEKGIELILSTEIVRADIASKT---LL--SATGL--IFKYQ 116 (461)
Q Consensus 65 ------~~~~~~~-----~~~----------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~---v~--~~~~~--~~~~d 116 (461)
.+..... ... ...+.+.+.+.|++++.+++|+++..+... |. ..+|+ ++.+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad 162 (512)
T 3e1t_A 83 WGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHAR 162 (512)
T ss_dssp CSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEE
T ss_pred ecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcC
Confidence 0000000 000 001223344579999999999999876653 33 34563 79999
Q ss_pred EEEEccCCCcc
Q 012545 117 ILVIATGSTVS 127 (461)
Q Consensus 117 ~liiAtG~~~~ 127 (461)
.||.|+|....
T Consensus 163 ~VI~AdG~~S~ 173 (512)
T 3e1t_A 163 FIVDASGNRTR 173 (512)
T ss_dssp EEEECCCTTCS
T ss_pred EEEECCCcchH
Confidence 99999998764
No 131
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.75 E-value=7.8e-08 Score=92.89 Aligned_cols=95 Identities=17% Similarity=0.195 Sum_probs=78.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCC---------------------cc-c---------CHHHHHHHH
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP---------------------RL-F---------TADIAAFYE 239 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~---------------------~~-~---------~~~~~~~~~ 239 (461)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. .. . ..++.+.+.
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYLA 83 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHHH
Confidence 3799999999999999999999999999998865311 00 0 067888889
Q ss_pred HHHHhcCcEEEcCCcEEEEEecCCCCEEE-EEeCCCcEEecCEEEEccCC
Q 012545 240 GYYANKGIKIIKGTVAVGFTTNADGEVKE-VKLKDGRTLEADIVVVGVGG 288 (461)
Q Consensus 240 ~~l~~~GV~v~~~~~v~~i~~~~~g~~~~-v~~~~G~~i~aD~vi~a~G~ 288 (461)
+.+++.|++++++++|+++..+ ++ ... |++++| ++.+|.||+|+|.
T Consensus 84 ~~~~~~~~~~~~~~~v~~i~~~-~~-~~~~v~~~~g-~~~~d~vV~AtG~ 130 (357)
T 4a9w_A 84 QYEQKYALPVLRPIRVQRVSHF-GE-RLRVVARDGR-QWLARAVISATGT 130 (357)
T ss_dssp HHHHHTTCCEECSCCEEEEEEE-TT-EEEEEETTSC-EEEEEEEEECCCS
T ss_pred HHHHHcCCEEEcCCEEEEEEEC-CC-cEEEEEeCCC-EEEeCEEEECCCC
Confidence 9999999999999999999873 33 345 888888 8999999999995
No 132
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.74 E-value=1.8e-08 Score=102.36 Aligned_cols=127 Identities=17% Similarity=0.147 Sum_probs=76.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCC-cccc---cccCCCCC----CCC--CCceeecCCC
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERP-ALSK---AYLFPEGT----ARL--PGFHVCVGSG 73 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~-~~~~---~~~~~~~~----~~~--~~~~~~~~~~ 73 (461)
..+||+|||||++|+++|..|++.|++ |+|||+.+.....+. .+.. ..+..... ..+ ..+.......
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~---V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 167 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGAR---VVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQ 167 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCe---EEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHH
Confidence 368999999999999999999999987 999999865321100 0000 00000000 000 0000000000
Q ss_pred CCCCCHhHHHHcCcEEEcCCeEEEEeCC-----CCEEEc--C-CC--cEEecCEEEEccCCCcccccccc
Q 012545 74 GERLLPEWYKEKGIELILSTEIVRADIA-----SKTLLS--A-TG--LIFKYQILVIATGSTVSITSLTS 133 (461)
Q Consensus 74 ~~~~~~~~~~~~~v~~~~~~~v~~i~~~-----~~~v~~--~-~~--~~~~~d~liiAtG~~~~~~~~~g 133 (461)
....+.+.+++.|++++.+++|+++..+ ...|.+ . +| .++.+|+||+|+|..+.+..+.|
T Consensus 168 l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r~~~~ 237 (497)
T 2bry_A 168 LQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVPEGFTI 237 (497)
T ss_dssp HHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCCTTCEE
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcccccccc
Confidence 0112334455679999999999999863 124555 3 55 46899999999999886544443
No 133
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.74 E-value=1.9e-08 Score=98.98 Aligned_cols=122 Identities=19% Similarity=0.254 Sum_probs=73.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCc---cccccc-----CCC-CC--CCCCCce-----
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPA---LSKAYL-----FPE-GT--ARLPGFH----- 67 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~---~~~~~~-----~~~-~~--~~~~~~~----- 67 (461)
+.+||+|||||++|+++|..|++.|++ |+|+|+.+.......+ ++..++ ... .. ..+....
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~G~~---V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~ 79 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLK---TLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPS 79 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTT
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCC---EEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCC
Confidence 368999999999999999999999987 9999998743221110 000000 000 00 0000000
Q ss_pred ----eecCCC------C--------CCCCHhHHHHcCcEEEcCCeEEEEeCCCCE---EEc---CCCcEEecCEEEEccC
Q 012545 68 ----VCVGSG------G--------ERLLPEWYKEKGIELILSTEIVRADIASKT---LLS---ATGLIFKYQILVIATG 123 (461)
Q Consensus 68 ----~~~~~~------~--------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~---v~~---~~~~~~~~d~liiAtG 123 (461)
...... . ...+.+.+.+.|++++.+++|+++..++.. |.+ .++.++.+|.+|.|+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G 159 (397)
T 3cgv_A 80 EKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADG 159 (397)
T ss_dssp CSSCEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCC
T ss_pred CCEEEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCC
Confidence 000000 0 011223344579999999999998766554 333 3456799999999999
Q ss_pred CCccc
Q 012545 124 STVSI 128 (461)
Q Consensus 124 ~~~~~ 128 (461)
....+
T Consensus 160 ~~s~~ 164 (397)
T 3cgv_A 160 FESEF 164 (397)
T ss_dssp TTCHH
T ss_pred cchHh
Confidence 87643
No 134
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.74 E-value=1.9e-08 Score=104.15 Aligned_cols=119 Identities=21% Similarity=0.323 Sum_probs=73.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCC-ccc--------------------------cccc
Q 012545 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERP-ALS--------------------------KAYL 55 (461)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~-~~~--------------------------~~~~ 55 (461)
|+.+||+|||||+||+++|..|++.|++ |+|+|+.+....... .+. ..+.
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~---V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~ 97 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHD---VTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFL 97 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCC---EEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEE
Confidence 3479999999999999999999999987 999999864322110 000 0000
Q ss_pred CCCCCCCCCCceeecCC--------C---------CCCCCHhHHHHcCcEEEcCCeEEEEeCC-CC--EEEcC-CC--cE
Q 012545 56 FPEGTARLPGFHVCVGS--------G---------GERLLPEWYKEKGIELILSTEIVRADIA-SK--TLLSA-TG--LI 112 (461)
Q Consensus 56 ~~~~~~~~~~~~~~~~~--------~---------~~~~~~~~~~~~~v~~~~~~~v~~i~~~-~~--~v~~~-~~--~~ 112 (461)
+..... ........ . ....+.+.+++.|++++.+++|+++..+ +. .|.+. +| .+
T Consensus 98 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~ 174 (591)
T 3i3l_A 98 WGQDQA---PWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVT 174 (591)
T ss_dssp CSSSCC---CEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEE
T ss_pred ecCCCc---cceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEE
Confidence 000000 00000000 0 0011223445689999999999999865 33 35555 55 57
Q ss_pred EecCEEEEccCCCcc
Q 012545 113 FKYQILVIATGSTVS 127 (461)
Q Consensus 113 ~~~d~liiAtG~~~~ 127 (461)
+.+|.+|.|+|....
T Consensus 175 i~AdlVV~AdG~~S~ 189 (591)
T 3i3l_A 175 VESDFVIDAGGSGGP 189 (591)
T ss_dssp EEESEEEECCGGGCH
T ss_pred EEcCEEEECCCCcch
Confidence 999999999998763
No 135
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.73 E-value=1.3e-08 Score=104.96 Aligned_cols=121 Identities=22% Similarity=0.243 Sum_probs=72.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCC-CC-ccc-------------ccccCC-----CC-CCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYE-RP-ALS-------------KAYLFP-----EG-TARL 63 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~-~~-~~~-------------~~~~~~-----~~-~~~~ 63 (461)
.+||+|||||++|+++|..|++.|++ |+|||+.+..... +. .+. ..+... .. ....
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~---V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~ 125 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVG---ALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGI 125 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCC---EEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTB
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC---EEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCc
Confidence 57999999999999999999999987 9999998653211 00 000 000000 00 0000
Q ss_pred C--Cceeec---CCCC---------CCCCHhHHHHcCcEEEcCCeEEEEeCCCCE--EEc--CCC-cEEecCEEEEccCC
Q 012545 64 P--GFHVCV---GSGG---------ERLLPEWYKEKGIELILSTEIVRADIASKT--LLS--ATG-LIFKYQILVIATGS 124 (461)
Q Consensus 64 ~--~~~~~~---~~~~---------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~--v~~--~~~-~~~~~d~liiAtG~ 124 (461)
. .+.... .... ...+.+.+++.|++++.+++|++++.+... +.+ .+| +++++|+||.|.|.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~ 205 (570)
T 3fmw_A 126 FTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGG 205 (570)
T ss_dssp CTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCS
T ss_pred ccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCC
Confidence 0 000000 0000 011223344569999999999998776543 444 567 68999999999998
Q ss_pred Cccc
Q 012545 125 TVSI 128 (461)
Q Consensus 125 ~~~~ 128 (461)
...+
T Consensus 206 ~S~v 209 (570)
T 3fmw_A 206 RSTV 209 (570)
T ss_dssp SCHH
T ss_pred CchH
Confidence 7643
No 136
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.73 E-value=3.9e-09 Score=106.14 Aligned_cols=126 Identities=21% Similarity=0.304 Sum_probs=75.6
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCC-CCCc---ccccccCCCCC-C--------CCCCce
Q 012545 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPY-ERPA---LSKAYLFPEGT-A--------RLPGFH 67 (461)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~-~~~~---~~~~~~~~~~~-~--------~~~~~~ 67 (461)
||++.+||+|||||+||+++|..|++.|++ |+|+|+.+.... ...+ ++...+..-.. . ...+..
T Consensus 2 mm~~~~dVvIVGaG~aGl~aA~~La~~G~~---V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~ 78 (453)
T 3atr_A 2 MKELKYDVLIIGGGFAGSSAAYQLSRRGLK---ILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIK 78 (453)
T ss_dssp CEEEECSEEEECCSHHHHHHHHHHSSSSCC---EEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEE
T ss_pred CCCCcCCEEEECcCHHHHHHHHHHHHCCCC---EEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceE
Confidence 666679999999999999999999999987 999999864210 1100 00000000000 0 000000
Q ss_pred ee---------cC---C-----CCCCCCHhHHHHcCcEEEcCCeEEEEeCCCCE---EEcC---CCc--EEecCEEEEcc
Q 012545 68 VC---------VG---S-----GGERLLPEWYKEKGIELILSTEIVRADIASKT---LLSA---TGL--IFKYQILVIAT 122 (461)
Q Consensus 68 ~~---------~~---~-----~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~---v~~~---~~~--~~~~d~liiAt 122 (461)
.. .. . .....+.+.+.+.|++++.+++|+++..+... |.+. +|+ ++.+|.||.|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~Ad 158 (453)
T 3atr_A 79 LYSPDMQTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEAT 158 (453)
T ss_dssp EECTTSSCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECC
T ss_pred EECCCCceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECc
Confidence 00 00 0 00011223334579999999999998766554 3343 565 78999999999
Q ss_pred CCCcccc
Q 012545 123 GSTVSIT 129 (461)
Q Consensus 123 G~~~~~~ 129 (461)
|....+.
T Consensus 159 G~~s~vr 165 (453)
T 3atr_A 159 GYSRSFR 165 (453)
T ss_dssp GGGCTTG
T ss_pred CCchhhH
Confidence 9877543
No 137
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.72 E-value=1.6e-07 Score=99.39 Aligned_cols=58 Identities=9% Similarity=0.074 Sum_probs=48.3
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCc-EEecCEEEEccCCCC
Q 012545 231 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGR-TLEADIVVVGVGGRP 290 (461)
Q Consensus 231 ~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~-~i~aD~vi~a~G~~p 290 (461)
+..+.+.+.+.+++.|++++.+++|+++..++++ ..|++.+|. ++.||.||+|+|...
T Consensus 411 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~--v~V~t~~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 411 PSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQ--WQLTFGQSQAAKHHATVILATGHRL 469 (689)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSS--EEEEEC-CCCCEEESEEEECCGGGT
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCe--EEEEeCCCcEEEECCEEEECCCcch
Confidence 4677888889999999999999999999984443 478888887 899999999999653
No 138
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.71 E-value=1.8e-08 Score=94.64 Aligned_cols=124 Identities=15% Similarity=0.117 Sum_probs=71.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHc-CCCCCcEEEEeCCCCCCC---CCC-cccccccCCCCC-----CCCCC-----cee
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQ-GVKPGELAIISKEAVAPY---ERP-ALSKAYLFPEGT-----ARLPG-----FHV 68 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~-g~~~~~V~vie~~~~~~~---~~~-~~~~~~~~~~~~-----~~~~~-----~~~ 68 (461)
..+||+|||||++|+++|..|++. |.+ |+|+|+.+.... ... .+.......... ..++. +..
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~---V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~ 114 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQ---VAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVV 114 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSC---EEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEE
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCe---EEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEE
Confidence 357999999999999999999997 876 999999865321 000 000000000000 00000 000
Q ss_pred e-cCCCCCCCCHhHHHH-cCcEEEcCCeEEEEeCCCCEE---EcC---------CC-----cEEecCEEEEccCCCcccc
Q 012545 69 C-VGSGGERLLPEWYKE-KGIELILSTEIVRADIASKTL---LSA---------TG-----LIFKYQILVIATGSTVSIT 129 (461)
Q Consensus 69 ~-~~~~~~~~~~~~~~~-~~v~~~~~~~v~~i~~~~~~v---~~~---------~~-----~~~~~d~liiAtG~~~~~~ 129 (461)
. ........+.+.+.+ .|++++.+++|.++..+...+ .+. ++ .++++|.+|+|+|..+.+.
T Consensus 115 ~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~ 194 (284)
T 1rp0_A 115 VKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFG 194 (284)
T ss_dssp ESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTT
T ss_pred ecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHH
Confidence 0 000000011222333 699999999999997655432 321 22 5789999999999887544
Q ss_pred c
Q 012545 130 S 130 (461)
Q Consensus 130 ~ 130 (461)
.
T Consensus 195 ~ 195 (284)
T 1rp0_A 195 A 195 (284)
T ss_dssp T
T ss_pred H
Confidence 3
No 139
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.70 E-value=8.4e-08 Score=95.36 Aligned_cols=63 Identities=21% Similarity=0.255 Sum_probs=50.7
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChhhh
Q 012545 231 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLF 295 (461)
Q Consensus 231 ~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~~~ 295 (461)
...+.+.+.+.++++|++++++++|++|.. +++++..|+++ |+++.||.||+|+|......++
T Consensus 195 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~-~~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~~ll 257 (425)
T 3ka7_A 195 CKGIIDALETVISANGGKIHTGQEVSKILI-ENGKAAGIIAD-DRIHDADLVISNLGHAATAVLC 257 (425)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEET-TEEEECSEEEECSCHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCEEEECCceeEEEE-ECCEEEEEEEC-CEEEECCEEEECCCHHHHHHhc
Confidence 466888999999999999999999999987 35666667775 7789999999999964433333
No 140
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.70 E-value=1.4e-07 Score=96.34 Aligned_cols=102 Identities=19% Similarity=0.192 Sum_probs=84.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCcc------------------------------------C----Cc-
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC------------------------------------M----PR- 228 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~------------------------------------~----~~- 228 (461)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+ + ..
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 468999999999999999999999999999987532 0 00
Q ss_pred -c-----------------------------cCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEe
Q 012545 229 -L-----------------------------FTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLE 278 (461)
Q Consensus 229 -~-----------------------------~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~ 278 (461)
. ....+.+.+.+.+++.|++++++++|+++.. +++.+..|++.+|+++.
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~-~~~~v~gV~l~~G~~i~ 265 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHM-EDGQITGVTLSNGEEIK 265 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEE-SSSBEEEEEETTSCEEE
T ss_pred cccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEE-eCCEEEEEEECCCCEEE
Confidence 0 0145666778888889999999999999987 45667789999999999
Q ss_pred cCEEEEccCCCCCh
Q 012545 279 ADIVVVGVGGRPLI 292 (461)
Q Consensus 279 aD~vi~a~G~~p~~ 292 (461)
||.||+|+|..+..
T Consensus 266 Ad~VVlA~G~~s~~ 279 (549)
T 3nlc_A 266 SRHVVLAVGHSARD 279 (549)
T ss_dssp CSCEEECCCTTCHH
T ss_pred CCEEEECCCCChhh
Confidence 99999999999864
No 141
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.67 E-value=8.3e-08 Score=97.88 Aligned_cols=58 Identities=16% Similarity=0.114 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCC-c--EEecC-EEEEccCCCC
Q 012545 233 DIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDG-R--TLEAD-IVVVGVGGRP 290 (461)
Q Consensus 233 ~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G-~--~i~aD-~vi~a~G~~p 290 (461)
.+.+.+.+.+++.|++++++++|+++..++++++.+|...++ + ++.|| .||+|+|-..
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 788888899999999999999999999854688888876543 2 58996 9999999544
No 142
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.66 E-value=3e-07 Score=90.57 Aligned_cols=57 Identities=19% Similarity=0.181 Sum_probs=45.4
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCC
Q 012545 231 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRP 290 (461)
Q Consensus 231 ~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p 290 (461)
+..+.+.+.+.+++.|++++.+++|+++..++ +. ..|++.+| ++.||.||+|+|...
T Consensus 152 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~-~~-v~v~t~~g-~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 152 VRGTLAALFTLAQAAGATLRAGETVTELVPDA-DG-VSVTTDRG-TYRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEET-TE-EEEEESSC-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEEcC-Ce-EEEEECCC-EEEcCEEEEcCCcCh
Confidence 34567778888889999999999999998733 33 35777666 799999999999753
No 143
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.66 E-value=1.2e-07 Score=93.54 Aligned_cols=122 Identities=13% Similarity=0.103 Sum_probs=71.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCC--cc--c----ccccCCC----------CCC---
Q 012545 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERP--AL--S----KAYLFPE----------GTA--- 61 (461)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~--~~--~----~~~~~~~----------~~~--- 61 (461)
++.+||+|||||++|+++|..|++.|++ |+|+|+.+....... .+ . ...+... ...
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~---v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~ 100 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGID---VSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVN 100 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCE---EEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEE
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCC---EEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceE
Confidence 3468999999999999999999999987 999999864321100 00 0 0000000 000
Q ss_pred --CCCCcee-ec--C----CCCC----CCCHhHHHH--cCcEEEcCCeEEEEeCCCC--EEEcCCCcEEecCEEEEccCC
Q 012545 62 --RLPGFHV-CV--G----SGGE----RLLPEWYKE--KGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGS 124 (461)
Q Consensus 62 --~~~~~~~-~~--~----~~~~----~~~~~~~~~--~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~liiAtG~ 124 (461)
...+... .. . .... ..+.+.+.+ .+++++.+++|++++.+.. .+.+.+|+++.+|.||.|+|.
T Consensus 101 ~~~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~ 180 (398)
T 2xdo_A 101 IADEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGG 180 (398)
T ss_dssp EECSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCT
T ss_pred EECCCCCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCc
Confidence 0000000 00 0 0000 001122222 1357888999999976554 466778888999999999998
Q ss_pred Ccc
Q 012545 125 TVS 127 (461)
Q Consensus 125 ~~~ 127 (461)
...
T Consensus 181 ~S~ 183 (398)
T 2xdo_A 181 MSK 183 (398)
T ss_dssp TCS
T ss_pred chh
Confidence 773
No 144
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.65 E-value=1.1e-07 Score=91.25 Aligned_cols=119 Identities=16% Similarity=0.207 Sum_probs=69.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCC-CC--------cccccccCCC---------------CC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYE-RP--------ALSKAYLFPE---------------GT 60 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~-~~--------~~~~~~~~~~---------------~~ 60 (461)
++||+|||||++|+++|..|++.|.+ |+|+|+.+..... .. .....++... ..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~---V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQ---VHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHV 78 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSE
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCc---EEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCe
Confidence 47999999999999999999999987 9999998642100 00 0000000000 00
Q ss_pred CCCC-CceeecC------CC------CCCCCHhHHH--HcCcEEEcCCeEEEEeCCCC--EEEcCCCcEE-ecCEEEEcc
Q 012545 61 ARLP-GFHVCVG------SG------GERLLPEWYK--EKGIELILSTEIVRADIASK--TLLSATGLIF-KYQILVIAT 122 (461)
Q Consensus 61 ~~~~-~~~~~~~------~~------~~~~~~~~~~--~~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~-~~d~liiAt 122 (461)
..+. .+..... .. .......+.+ ..+++++.+++|++++.+.. .+.+.+|+.. .+|+||+|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~a~~vV~a~ 158 (336)
T 1yvv_A 79 AEWTPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMRGDMPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFSHVIIAT 158 (336)
T ss_dssp EEECCCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHHTTCCEECSCCEEEEEECSSCEEEEETTSCEEEEESEEEECS
T ss_pred eeccccceeccCcccccCCCCCccEEcCccHHHHHHHHHccCcEEecCEEEEEEEeCCEEEEEeCCCcCccccCEEEEcC
Confidence 0000 0000000 00 0011222222 23899999999999986654 4566777766 499999999
Q ss_pred CCCc
Q 012545 123 GSTV 126 (461)
Q Consensus 123 G~~~ 126 (461)
|...
T Consensus 159 g~~~ 162 (336)
T 1yvv_A 159 PAPQ 162 (336)
T ss_dssp CHHH
T ss_pred CHHH
Confidence 9654
No 145
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.63 E-value=2.6e-07 Score=99.85 Aligned_cols=58 Identities=26% Similarity=0.311 Sum_probs=49.5
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCC
Q 012545 231 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRP 290 (461)
Q Consensus 231 ~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p 290 (461)
+..+.+.+.+.+++.|++++.+++|+++.. +++.+..|.+.+| ++.||.||+|+|...
T Consensus 150 p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~-~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 150 AARAVQLLIKRTESAGVTYRGSTTVTGIEQ-SGGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEECCceEEEEEE-eCCEEEEEEECCc-EEECCEEEECCccch
Confidence 557888889999999999999999999987 3455667888888 899999999999764
No 146
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.62 E-value=1.2e-07 Score=91.50 Aligned_cols=116 Identities=18% Similarity=0.303 Sum_probs=69.3
Q ss_pred CeEEEEcCChHHHHHHHHHHH---cCCCCCcEEEEeCCCCCCCC----CC------c--ccccccC--CC----------
Q 012545 6 FKYVILGGGVSAGYAAREFAK---QGVKPGELAIISKEAVAPYE----RP------A--LSKAYLF--PE---------- 58 (461)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~L~~---~g~~~~~V~vie~~~~~~~~----~~------~--~~~~~~~--~~---------- 58 (461)
+||+|||||++|+++|..|++ .|++ |+|+||++..... +. . ....++. ..
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~---V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~ 78 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLY---LAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYD 78 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEE---EEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCce---EEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHH
Confidence 599999999999999999999 7876 9999998642210 00 0 0000000 00
Q ss_pred ------CCCCCC----------CceeecCCCCCC-CCHhHHHHcCcEEEcCCeEEEEeCCCC--EEEcCCCcEEecCEEE
Q 012545 59 ------GTARLP----------GFHVCVGSGGER-LLPEWYKEKGIELILSTEIVRADIASK--TLLSATGLIFKYQILV 119 (461)
Q Consensus 59 ------~~~~~~----------~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~li 119 (461)
....+. ............ ....+.+..+++++++++|.+++.++. .|.+.+|+++.+|+||
T Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV 158 (342)
T 3qj4_A 79 ELLAYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIV 158 (342)
T ss_dssp HHHHTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEE
T ss_pred HHHhCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEE
Confidence 000000 000000001111 112233445899999999999987654 4566777778999999
Q ss_pred EccCC
Q 012545 120 IATGS 124 (461)
Q Consensus 120 iAtG~ 124 (461)
+|+..
T Consensus 159 ~A~p~ 163 (342)
T 3qj4_A 159 LTMPV 163 (342)
T ss_dssp ECSCH
T ss_pred ECCCH
Confidence 99984
No 147
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.61 E-value=7e-08 Score=94.48 Aligned_cols=35 Identities=23% Similarity=0.434 Sum_probs=32.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~ 42 (461)
.+||+|||||++|+++|++|++.|++ |+|+|+...
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~~G~~---V~llE~~~~ 51 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAKENKN---TALFESGTM 51 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCc---EEEEeCCCC
Confidence 58999999999999999999999987 999999854
No 148
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.61 E-value=7.9e-08 Score=96.78 Aligned_cols=52 Identities=25% Similarity=0.298 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCC
Q 012545 233 DIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGG 288 (461)
Q Consensus 233 ~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~ 288 (461)
.+.+.+.+.+.+ ++++++++|++|+.++++ ..|++.+|+++.+|.||+|++.
T Consensus 236 ~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~--~~v~~~~g~~~~ad~vi~a~p~ 287 (470)
T 3i6d_A 236 TLVEEIEKQLKL--TKVYKGTKVTKLSHSGSC--YSLELDNGVTLDADSVIVTAPH 287 (470)
T ss_dssp HHHHHHHHTCCS--EEEECSCCEEEEEECSSS--EEEEESSSCEEEESEEEECSCH
T ss_pred HHHHHHHHhcCC--CEEEeCCceEEEEEcCCe--EEEEECCCCEEECCEEEECCCH
Confidence 344444443332 789999999999984444 5788999989999999999884
No 149
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.60 E-value=8.5e-08 Score=97.48 Aligned_cols=121 Identities=17% Similarity=0.231 Sum_probs=73.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCC-CC-cc-------------cccccCCCCCCC---CC
Q 012545 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYE-RP-AL-------------SKAYLFPEGTAR---LP 64 (461)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~-~~-~~-------------~~~~~~~~~~~~---~~ 64 (461)
.+.+||+||||||+|+++|..|++.|++ |+|+|+.+..... +. .+ ...+... .... +.
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~---v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~-~~~~~~~~~ 84 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVE---VVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEV-ETSTQGHFG 84 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSC-CBCCEEEET
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCC---EEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhc-ccccccccc
Confidence 3578999999999999999999999987 9999998653211 10 00 0000000 0000 00
Q ss_pred CceeecC--CC------------CCCCCHhHHHHcCcEEEcCCeEEEEeCCCCE--EEcCCCc---EEecCEEEEccCCC
Q 012545 65 GFHVCVG--SG------------GERLLPEWYKEKGIELILSTEIVRADIASKT--LLSATGL---IFKYQILVIATGST 125 (461)
Q Consensus 65 ~~~~~~~--~~------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~--v~~~~~~---~~~~d~liiAtG~~ 125 (461)
+...... .. ....+.+.+.+.|++++.++++++++.+... +.+.++. ++++|+||.|.|..
T Consensus 85 ~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~ 164 (500)
T 2qa1_A 85 GLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGR 164 (500)
T ss_dssp TEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTT
T ss_pred ceecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcc
Confidence 0000000 00 0011223345579999999999999765544 4444553 79999999999987
Q ss_pred cc
Q 012545 126 VS 127 (461)
Q Consensus 126 ~~ 127 (461)
..
T Consensus 165 S~ 166 (500)
T 2qa1_A 165 SS 166 (500)
T ss_dssp CH
T ss_pred hH
Confidence 63
No 150
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.60 E-value=1.6e-07 Score=89.76 Aligned_cols=101 Identities=16% Similarity=0.175 Sum_probs=82.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCC---------------c---ccCHHHHHHHHHHHHhcCcEEEcC
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP---------------R---LFTADIAAFYEGYYANKGIKIIKG 252 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~---------------~---~~~~~~~~~~~~~l~~~GV~v~~~ 252 (461)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. . ....++.+.+.+.+++.|++++++
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICLE 87 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEECS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEEcc
Confidence 5799999999999999999999999999999764321 1 013677888888899999999999
Q ss_pred CcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCC---CCChh
Q 012545 253 TVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGG---RPLIS 293 (461)
Q Consensus 253 ~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~---~p~~~ 293 (461)
++|+++....++ ...|.+.+|+ +.+|.||+|+|. .|...
T Consensus 88 ~~v~~i~~~~~~-~~~v~~~~g~-~~~d~vVlAtG~~~~~p~~~ 129 (332)
T 3lzw_A 88 QAVESVEKQADG-VFKLVTNEET-HYSKTVIITAGNGAFKPRKL 129 (332)
T ss_dssp CCEEEEEECTTS-CEEEEESSEE-EEEEEEEECCTTSCCEECCC
T ss_pred CEEEEEEECCCC-cEEEEECCCE-EEeCEEEECCCCCcCCCCCC
Confidence 999999874332 3568888885 999999999998 66543
No 151
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.59 E-value=9.7e-08 Score=98.80 Aligned_cols=35 Identities=31% Similarity=0.421 Sum_probs=32.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~ 42 (461)
.+||||||||+||++||..|++.|.+ |+|+||.+.
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~---V~vlEk~~~ 160 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAK---VILIEKEPV 160 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCc---EEEEeCCCC
Confidence 58999999999999999999999987 999999875
No 152
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.58 E-value=2.8e-07 Score=87.65 Aligned_cols=100 Identities=13% Similarity=0.131 Sum_probs=80.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccC--CccC--------Cc---ccCHHHHHHHHHHHHhcCcEEEcCCcEEE
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPE--PWCM--------PR---LFTADIAAFYEGYYANKGIKIIKGTVAVG 257 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~--~~~~--------~~---~~~~~~~~~~~~~l~~~GV~v~~~~~v~~ 257 (461)
.+|+|||+|+.|+.+|..|++.|.+|+++++. ..+. +. ....++.+.+.+.+++.|++++. .+|++
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~ 94 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL-DIVEK 94 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEE-SCEEE
T ss_pred cCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEE-EEEEE
Confidence 47999999999999999999999999999985 1110 11 12357788888899999999999 89999
Q ss_pred EEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChh
Q 012545 258 FTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLIS 293 (461)
Q Consensus 258 i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~ 293 (461)
+..+ +....+.+.+|.++.+|.+|+|+|..|...
T Consensus 95 i~~~--~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~ 128 (323)
T 3f8d_A 95 IENR--GDEFVVKTKRKGEFKADSVILGIGVKRRKL 128 (323)
T ss_dssp EEEC----CEEEEESSSCEEEEEEEEECCCCEECCC
T ss_pred EEec--CCEEEEEECCCCEEEcCEEEECcCCCCccC
Confidence 9873 223568888888999999999999887654
No 153
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.58 E-value=3.1e-07 Score=90.97 Aligned_cols=98 Identities=19% Similarity=0.241 Sum_probs=79.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCc---------------------------c-------------
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR---------------------------L------------- 229 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~---------------------------~------------- 229 (461)
..+|+|||+|..|+.+|..|++.|.+|+++++.+.+... .
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 106 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQDF 106 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHHH
Confidence 458999999999999999999999999999987653110 0
Q ss_pred -----------------------cCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEcc
Q 012545 230 -----------------------FTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGV 286 (461)
Q Consensus 230 -----------------------~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~ 286 (461)
...++.+.+.+.+++.||+++++++|+++..++++ ..|.+.+| ++.||.||+|+
T Consensus 107 ~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~--~~V~~~~g-~i~ad~VIlAt 183 (417)
T 3v76_A 107 VALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASG--FRVTTSAG-TVDAASLVVAS 183 (417)
T ss_dssp HHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE--EEEEETTE-EEEESEEEECC
T ss_pred HHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE--EEEEECCc-EEEeeEEEECC
Confidence 01256677888888899999999999999873333 57888888 89999999999
Q ss_pred CCCC
Q 012545 287 GGRP 290 (461)
Q Consensus 287 G~~p 290 (461)
|..+
T Consensus 184 G~~S 187 (417)
T 3v76_A 184 GGKS 187 (417)
T ss_dssp CCSS
T ss_pred CCcc
Confidence 9876
No 154
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.58 E-value=3.8e-07 Score=93.39 Aligned_cols=102 Identities=21% Similarity=0.147 Sum_probs=83.2
Q ss_pred CcEEEECCCHHHHHHHHHHH-HCCCcEEEEccCCccCC--------c------------cc----------------CHH
Q 012545 191 GKAVVVGGGYIGLELSAALK-INNIDVSMVYPEPWCMP--------R------------LF----------------TAD 233 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~-~~g~~Vtli~~~~~~~~--------~------------~~----------------~~~ 233 (461)
.+|+|||+|+.|+.+|..|+ +.|.+|+++++.+.+.. . .+ .++
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~e 88 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQPE 88 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHHH
Confidence 47999999999999999999 89999999998653311 0 01 246
Q ss_pred HHHHHHHHHHhcCc--EEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCC--CCCh
Q 012545 234 IAAFYEGYYANKGI--KIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGG--RPLI 292 (461)
Q Consensus 234 ~~~~~~~~l~~~GV--~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~--~p~~ 292 (461)
+.+.+.+.+++.|+ .++++++|+++..++++....|++++|+++.+|.||+|+|. +|..
T Consensus 89 i~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~ 151 (540)
T 3gwf_A 89 ILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINF 151 (540)
T ss_dssp HHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCC
T ss_pred HHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCC
Confidence 67788888899998 89999999999875555567899999999999999999994 5544
No 155
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.57 E-value=7.2e-08 Score=99.63 Aligned_cols=35 Identities=17% Similarity=0.327 Sum_probs=32.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~ 42 (461)
.+||||||||++|++||..|++.|.+ |+||||.+.
T Consensus 121 ~~DVvVVG~G~aGl~aA~~la~~G~~---V~vlEk~~~ 155 (566)
T 1qo8_A 121 TTQVLVVGAGSAGFNASLAAKKAGAN---VILVDKAPF 155 (566)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHTCC---EEEECSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCc---EEEEeCCCC
Confidence 57999999999999999999999987 999999875
No 156
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.57 E-value=3.7e-07 Score=93.73 Aligned_cols=103 Identities=19% Similarity=0.184 Sum_probs=83.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCc--------------------c----------------cCHH
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR--------------------L----------------FTAD 233 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~--------------------~----------------~~~~ 233 (461)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+... . -.++
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~e 100 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPE 100 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHH
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHH
Confidence 357999999999999999999999999999986532100 0 1246
Q ss_pred HHHHHHHHHHhcCc--EEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccC--CCCCh
Q 012545 234 IAAFYEGYYANKGI--KIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVG--GRPLI 292 (461)
Q Consensus 234 ~~~~~~~~l~~~GV--~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G--~~p~~ 292 (461)
+.+.+.+.+++.|+ +++++++|+++..+++.....|++.+|+++.+|.||+|+| .+|..
T Consensus 101 i~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~ 163 (549)
T 4ap3_A 101 ILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANT 163 (549)
T ss_dssp HHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCC
T ss_pred HHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCC
Confidence 77788888899998 8999999999987555556789999999999999999999 45544
No 157
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.57 E-value=3.3e-07 Score=94.68 Aligned_cols=101 Identities=23% Similarity=0.266 Sum_probs=78.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCc------------------------------------------
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR------------------------------------------ 228 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~------------------------------------------ 228 (461)
-.|+|||+|..|+.+|..|++.|.+|+++++.+.+...
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~~~ 201 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQNDI 201 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCH
Confidence 36999999999999999999999999999987643210
Q ss_pred ---------------------------------------------ccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCC
Q 012545 229 ---------------------------------------------LFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNAD 263 (461)
Q Consensus 229 ---------------------------------------------~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~ 263 (461)
.....+.+.+.+.+++.||+++++++|+++..+++
T Consensus 202 ~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~ 281 (566)
T 1qo8_A 202 KLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDD 281 (566)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTT
T ss_pred HHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCC
Confidence 00123445666777889999999999999987433
Q ss_pred CCEEEEEeC--CCc--EEecCEEEEccCCCCC
Q 012545 264 GEVKEVKLK--DGR--TLEADIVVVGVGGRPL 291 (461)
Q Consensus 264 g~~~~v~~~--~G~--~i~aD~vi~a~G~~p~ 291 (461)
+++.+|++. +|+ ++.+|.||+|+|....
T Consensus 282 g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 282 HSVVGAVVHGKHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp SBEEEEEEEETTTEEEEEEEEEEEECCCCCTT
T ss_pred CcEEEEEEEeCCCcEEEEEcCEEEEecCCccc
Confidence 777667664 675 6899999999996543
No 158
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.57 E-value=7.8e-07 Score=92.01 Aligned_cols=100 Identities=21% Similarity=0.246 Sum_probs=78.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCc------------------------------------------
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR------------------------------------------ 228 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~------------------------------------------ 228 (461)
..|+|||+|..|+.+|..+++.|.+|+++++.+.+...
T Consensus 127 ~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~~ 206 (571)
T 1y0p_A 127 VDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNINDP 206 (571)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCH
Confidence 57999999999999999999999999999987643210
Q ss_pred ---------------------------------------------ccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCC
Q 012545 229 ---------------------------------------------LFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNAD 263 (461)
Q Consensus 229 ---------------------------------------------~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~ 263 (461)
.....+.+.+.+.+++.||+++++++|+++..+++
T Consensus 207 ~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~ 286 (571)
T 1y0p_A 207 ALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDK 286 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEECTT
T ss_pred HHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCC
Confidence 00124455667777889999999999999987444
Q ss_pred CCEEEEEeC--CCc--EEecCEEEEccCCCC
Q 012545 264 GEVKEVKLK--DGR--TLEADIVVVGVGGRP 290 (461)
Q Consensus 264 g~~~~v~~~--~G~--~i~aD~vi~a~G~~p 290 (461)
+++.+|++. +|+ ++.+|.||+|+|...
T Consensus 287 g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 287 GTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp SCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred CeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 777767665 675 689999999999643
No 159
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.56 E-value=2.6e-07 Score=88.61 Aligned_cols=101 Identities=14% Similarity=0.152 Sum_probs=79.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCC----cc------------CCc----ccCHHHHHHHHHHHHhcCcEE
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEP----WC------------MPR----LFTADIAAFYEGYYANKGIKI 249 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~----~~------------~~~----~~~~~~~~~~~~~l~~~GV~v 249 (461)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+ .+ .+. ....++.+.+.+.+++.|+++
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i 101 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTEI 101 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcCCEE
Confidence 5689999999999999999999999999999843 11 011 123578888899999999999
Q ss_pred EcCCcEEEEEecCCCCEEEEEe---CCCcEEecCEEEEccCCCCChh
Q 012545 250 IKGTVAVGFTTNADGEVKEVKL---KDGRTLEADIVVVGVGGRPLIS 293 (461)
Q Consensus 250 ~~~~~v~~i~~~~~g~~~~v~~---~~G~~i~aD~vi~a~G~~p~~~ 293 (461)
+.++ ++++..+ ++. ..+.+ .++.++.+|.+|+|+|.+|...
T Consensus 102 ~~~~-v~~i~~~-~~~-~~v~~~~~~~~~~~~~d~vvlAtG~~~~~~ 145 (338)
T 3itj_A 102 ITET-VSKVDLS-SKP-FKLWTEFNEDAEPVTTDAIILATGASAKRM 145 (338)
T ss_dssp ECSC-EEEEECS-SSS-EEEEETTCSSSCCEEEEEEEECCCEEECCC
T ss_pred EEeE-EEEEEEc-CCE-EEEEEEecCCCcEEEeCEEEECcCCCcCCC
Confidence 9988 9999873 232 45666 4677899999999999876543
No 160
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.55 E-value=4.5e-07 Score=86.93 Aligned_cols=97 Identities=20% Similarity=0.243 Sum_probs=79.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccC------------------CcccCHHHHHHHHHHHHhcCcEEEcC
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM------------------PRLFTADIAAFYEGYYANKGIKIIKG 252 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~------------------~~~~~~~~~~~~~~~l~~~GV~v~~~ 252 (461)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. +.....++.+.+.+.+++.+++++.+
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 85 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYSLG 85 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEEEeC
Confidence 579999999999999999999999999999876431 00112567777888888889999999
Q ss_pred CcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCC
Q 012545 253 TVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGR 289 (461)
Q Consensus 253 ~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~ 289 (461)
++|+++..+++ ...|.+.+|+++.+|.||+|+|..
T Consensus 86 ~~v~~i~~~~~--~~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 86 ERAETLEREGD--LFKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp CCEEEEEEETT--EEEEEETTSCEEEEEEEEECCTTS
T ss_pred CEEEEEEECCC--EEEEEECCCCEEEeCEEEECCCCC
Confidence 99999987332 456888888899999999999984
No 161
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.55 E-value=6.9e-07 Score=86.66 Aligned_cols=99 Identities=17% Similarity=0.242 Sum_probs=81.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccC-------C--------c---ccCHHHHHHHHHHHHhcCcEEEc
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM-------P--------R---LFTADIAAFYEGYYANKGIKIIK 251 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~-------~--------~---~~~~~~~~~~~~~l~~~GV~v~~ 251 (461)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. + . ....++.+.+.+.+++.|++++.
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 93 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVVL 93 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEEEc
Confidence 4579999999999999999999999999999876431 1 0 01267777888888999999999
Q ss_pred CCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCC
Q 012545 252 GTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGR 289 (461)
Q Consensus 252 ~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~ 289 (461)
+++|+++...+++ ...|++.+|+++.+|.+|+|+|..
T Consensus 94 ~~~v~~i~~~~~~-~~~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 94 NETVTKYTKLDDG-TFETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp SCCEEEEEECTTS-CEEEEETTSCEEEEEEEEECCTTC
T ss_pred CCEEEEEEECCCc-eEEEEECCCcEEEeeEEEEccCCC
Confidence 9999999874332 356888899899999999999984
No 162
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.54 E-value=1.9e-07 Score=94.83 Aligned_cols=121 Identities=17% Similarity=0.206 Sum_probs=73.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCC-CC-cc-------------cccccCC--CCCCCCCCc
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYE-RP-AL-------------SKAYLFP--EGTARLPGF 66 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~-~~-~~-------------~~~~~~~--~~~~~~~~~ 66 (461)
+.+||+||||||+|+++|..|++.|++ |+|+|+.+..... +. .+ ...+... .....+.+.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~---v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~ 87 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVD---VMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGR 87 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCC---EEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecce
Confidence 468999999999999999999999987 9999998653211 10 00 0000000 000000000
Q ss_pred eeecC---CC-----------CCCCCHhHHHHcCcEEEcCCeEEEEeCCCC--EEEcCCCc---EEecCEEEEccCCCcc
Q 012545 67 HVCVG---SG-----------GERLLPEWYKEKGIELILSTEIVRADIASK--TLLSATGL---IFKYQILVIATGSTVS 127 (461)
Q Consensus 67 ~~~~~---~~-----------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~~~---~~~~d~liiAtG~~~~ 127 (461)
..... .. ....+.+.+.+.|++++.++++++++.+.. ++.+.++. ++++|+||.|.|....
T Consensus 88 ~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~ 167 (499)
T 2qa2_A 88 PVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRST 167 (499)
T ss_dssp EEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTCH
T ss_pred ecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCcccH
Confidence 00000 00 001122334557999999999999976554 34555553 7999999999998763
No 163
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.53 E-value=1.1e-07 Score=97.91 Aligned_cols=59 Identities=22% Similarity=0.152 Sum_probs=48.0
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCC---C--cEEecCEEEEccCCCC
Q 012545 231 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKD---G--RTLEADIVVVGVGGRP 290 (461)
Q Consensus 231 ~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~---G--~~i~aD~vi~a~G~~p 290 (461)
+..+...+.+.+++.|++++.+++|+++.. +++.+..|++.+ | .++.||.||.|+|...
T Consensus 169 ~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~-~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 169 DARLTLEIMKEAVARGAVALNYMKVESFIY-DQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCCEEEEEEE-cCCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 567788888889999999999999999987 456666777654 3 4789999999999643
No 164
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.53 E-value=1.2e-07 Score=93.80 Aligned_cols=121 Identities=14% Similarity=0.061 Sum_probs=70.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcc--c-------c--cccCC--CCCCCCCCceeec
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPAL--S-------K--AYLFP--EGTARLPGFHVCV 70 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~--~-------~--~~~~~--~~~~~~~~~~~~~ 70 (461)
+.+||+|||||++|+++|..|++.|++ |+|+|+.+......... . . +++.. ........+....
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~---V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~ 98 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGID---CDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRD 98 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCC---EEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEE
Confidence 468999999999999999999999987 99999986532110000 0 0 00000 0000000000000
Q ss_pred C-------------------CCCC----CCCHhHHHH--cCcEEEcCCeEEEEeCCCC--EEEcCCCcEEecCEEEEccC
Q 012545 71 G-------------------SGGE----RLLPEWYKE--KGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATG 123 (461)
Q Consensus 71 ~-------------------~~~~----~~~~~~~~~--~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~liiAtG 123 (461)
. .... ..+...+.+ ..++++.+++|++++.+.. .+.+.+|+++.+|.||.|.|
T Consensus 99 ~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG 178 (407)
T 3rp8_A 99 FRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGRDSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADG 178 (407)
T ss_dssp TTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCGGGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCC
T ss_pred CCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCcCEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCC
Confidence 0 0000 011111111 1278889999999986655 45677888999999999999
Q ss_pred CCcc
Q 012545 124 STVS 127 (461)
Q Consensus 124 ~~~~ 127 (461)
....
T Consensus 179 ~~S~ 182 (407)
T 3rp8_A 179 SHSA 182 (407)
T ss_dssp TTCS
T ss_pred cChH
Confidence 8763
No 165
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.52 E-value=1.6e-07 Score=91.50 Aligned_cols=35 Identities=14% Similarity=0.334 Sum_probs=32.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~ 42 (461)
.+||+|||||++|+++|++|+++|++ |+|+|+...
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~---V~vle~~~~ 36 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLN---VLMTDAHMP 36 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCC---EEEECSSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCe---EEEEecCCC
Confidence 57999999999999999999999987 999999864
No 166
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.52 E-value=1.4e-07 Score=92.56 Aligned_cols=101 Identities=21% Similarity=0.323 Sum_probs=78.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCC--cccCH---------HHHHHHHHHHHhcCcEEEcCCcEEE
Q 012545 189 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP--RLFTA---------DIAAFYEGYYANKGIKIIKGTVAVG 257 (461)
Q Consensus 189 ~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~--~~~~~---------~~~~~~~~~l~~~GV~v~~~~~v~~ 257 (461)
...+|+|||+|+.|+.+|..|...+.+|+++++.+.+.- ..++. ++.....+.+++.||+++++++|++
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~~ 87 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFATS 87 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCEEE
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEEEE
Confidence 356899999999999999999878899999999876421 11111 1112245667889999999999999
Q ss_pred EEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChh
Q 012545 258 FTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLIS 293 (461)
Q Consensus 258 i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~ 293 (461)
++. +.+ .|++++|+++.+|.+|+|||.+|...
T Consensus 88 id~--~~~--~v~~~~g~~~~yd~lvlAtG~~p~~p 119 (385)
T 3klj_A 88 IDP--NNK--LVTLKSGEKIKYEKLIIASGSIANKI 119 (385)
T ss_dssp EET--TTT--EEEETTSCEEECSEEEECCCEEECCC
T ss_pred EEC--CCC--EEEECCCCEEECCEEEEecCCCcCCC
Confidence 986 333 57889999999999999999877653
No 167
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.52 E-value=7.8e-07 Score=87.02 Aligned_cols=99 Identities=26% Similarity=0.294 Sum_probs=81.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCc-----------------------------------------
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR----------------------------------------- 228 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~----------------------------------------- 228 (461)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+...
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 468999999999999999999999999999987654210
Q ss_pred --cc-----------CHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChh
Q 012545 229 --LF-----------TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLIS 293 (461)
Q Consensus 229 --~~-----------~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~ 293 (461)
.+ ...+.+.+.+.+++.|++++.+++|++++. ++ .|++.+|+++.+|.||.|.|..+...
T Consensus 91 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~---~v~~~~g~~~~ad~vV~AdG~~s~vr 163 (379)
T 3alj_A 91 VSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG---RLTLQTGEVLEADLIVGADGVGSKVR 163 (379)
T ss_dssp EEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT---EEEETTSCEEECSEEEECCCTTCHHH
T ss_pred eeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC---EEEECCCCEEEcCEEEECCCccHHHH
Confidence 00 045567778888889999999999999986 44 57888999999999999999887653
No 168
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.52 E-value=1.1e-08 Score=102.33 Aligned_cols=59 Identities=20% Similarity=0.197 Sum_probs=51.4
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCC
Q 012545 231 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGR 289 (461)
Q Consensus 231 ~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~ 289 (461)
..++.+.+.+.+++.|++++++++|++|..++++++.+|++.+|+++.||.||++++..
T Consensus 255 ~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 255 LGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp TTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 35788899999999999999999999998755788889999999999999999999987
No 169
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.51 E-value=9.2e-08 Score=98.25 Aligned_cols=39 Identities=28% Similarity=0.439 Sum_probs=34.2
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHH---cCCCCCcEEEEeCCCC
Q 012545 1 MAEKSFKYVILGGGVSAGYAAREFAK---QGVKPGELAIISKEAV 42 (461)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~L~~---~g~~~~~V~vie~~~~ 42 (461)
|+++.+||+|||||++|+++|..|++ .|++ |+|||+...
T Consensus 1 M~~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~---V~liE~~~~ 42 (538)
T 2aqj_A 1 MNKPIKNIVIVGGGTAGWMAASYLVRALQQQAN---ITLIESAAI 42 (538)
T ss_dssp -CCBCCEEEEECCSHHHHHHHHHHHHHCCSSCE---EEEEECSSS
T ss_pred CCCCCCeEEEECCCHHHHHHHHHHHhhcCCCCE---EEEECCCCC
Confidence 65667999999999999999999999 8876 999999754
No 170
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.51 E-value=6.1e-07 Score=84.25 Aligned_cols=100 Identities=15% Similarity=0.153 Sum_probs=78.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCcc---------CCc---ccCHHHHHHHHHHHHhc-CcEEEcCCcEEE
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC---------MPR---LFTADIAAFYEGYYANK-GIKIIKGTVAVG 257 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~---------~~~---~~~~~~~~~~~~~l~~~-GV~v~~~~~v~~ 257 (461)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.. .+. ....++.+.+.+.+++. +++++. .+|++
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~ 81 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVE-GRVTD 81 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEE-SCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEE-eEEEE
Confidence 47999999999999999999999999999975321 111 12246777788888877 788875 48999
Q ss_pred EEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChh
Q 012545 258 FTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLIS 293 (461)
Q Consensus 258 i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~ 293 (461)
+..+++ ...+++.+|+++.+|.+|+|+|.+|...
T Consensus 82 i~~~~~--~~~v~~~~g~~~~~d~vviAtG~~~~~~ 115 (297)
T 3fbs_A 82 AKGSFG--EFIVEIDGGRRETAGRLILAMGVTDELP 115 (297)
T ss_dssp EEEETT--EEEEEETTSCEEEEEEEEECCCCEEECC
T ss_pred EEEcCC--eEEEEECCCCEEEcCEEEECCCCCCCCC
Confidence 987332 3578889998999999999999887653
No 171
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.50 E-value=8.5e-07 Score=84.04 Aligned_cols=98 Identities=19% Similarity=0.256 Sum_probs=77.7
Q ss_pred cEEEECCCHHHHHHHHHHHHCCC-cEEEEccCCc-----------cCCc----ccCHHHHHHHHHHHHhcCcEEEcCCcE
Q 012545 192 KAVVVGGGYIGLELSAALKINNI-DVSMVYPEPW-----------CMPR----LFTADIAAFYEGYYANKGIKIIKGTVA 255 (461)
Q Consensus 192 ~v~VvG~G~~g~e~a~~l~~~g~-~Vtli~~~~~-----------~~~~----~~~~~~~~~~~~~l~~~GV~v~~~~~v 255 (461)
+|+|||+|+.|+.+|..|++.|. +|+++++... ..+. ....++.+.+.+.+++.|++++. .++
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v 81 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEM-TAV 81 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEEC-SCE
T ss_pred eEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEE-EEE
Confidence 68999999999999999999999 9999998521 0111 11256777888888999999998 789
Q ss_pred EEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCCh
Q 012545 256 VGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 292 (461)
Q Consensus 256 ~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~ 292 (461)
+++..++ ....+.+.+|+++.+|.+|+|+|.+|..
T Consensus 82 ~~i~~~~--~~~~v~~~~g~~~~~~~vv~AtG~~~~~ 116 (311)
T 2q0l_A 82 QRVSKKD--SHFVILAEDGKTFEAKSVIIATGGSPKR 116 (311)
T ss_dssp EEEEEET--TEEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EEEEEcC--CEEEEEEcCCCEEECCEEEECCCCCCCC
Confidence 9998632 2346778888899999999999977654
No 172
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.50 E-value=9.3e-07 Score=88.93 Aligned_cols=133 Identities=20% Similarity=0.252 Sum_probs=90.2
Q ss_pred CcEEEECCCHHHHHHHHHHHH---CCCc---EEEEccCCccCCc------------------------------------
Q 012545 191 GKAVVVGGGYIGLELSAALKI---NNID---VSMVYPEPWCMPR------------------------------------ 228 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~---~g~~---Vtli~~~~~~~~~------------------------------------ 228 (461)
++|+|||+|+.|+.+|..|++ .|.+ |+++++.+.+...
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 579999999999999999999 9999 9999987542100
Q ss_pred --------------c-cCHHHHHHHHHHHHhcCcE--EEcCCcEEEEEecCCCCEEEEEeCC---C--cEEecCEEEEcc
Q 012545 229 --------------L-FTADIAAFYEGYYANKGIK--IIKGTVAVGFTTNADGEVKEVKLKD---G--RTLEADIVVVGV 286 (461)
Q Consensus 229 --------------~-~~~~~~~~~~~~l~~~GV~--v~~~~~v~~i~~~~~g~~~~v~~~~---G--~~i~aD~vi~a~ 286 (461)
. -..++.+.+.+.+++.|++ ++++++|+++...+++....|++.+ | .++.+|.||+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAt 162 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCT 162 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECC
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECC
Confidence 0 0145667778888888998 9999999999874443234566654 4 578999999999
Q ss_pred C--CCCChhhhhcccccCCCcEEeC-CCCCC---CCCCEEEeCc
Q 012545 287 G--GRPLISLFKGQVAENKGGIETD-DFFKT---SADDVYAVGD 324 (461)
Q Consensus 287 G--~~p~~~~~~~~~~~~~g~i~vd-~~~~t---~~~~vya~GD 324 (461)
| ..|+...++ ++..-.|.+... ++... ..+.|-++|.
T Consensus 163 G~~s~p~~p~ip-G~~~~~g~~~hs~~~~~~~~~~~k~VvVVG~ 205 (464)
T 2xve_A 163 GHFSTPYVPEFE-GFEKFGGRILHAHDFRDALEFKDKTVLLVGS 205 (464)
T ss_dssp CSSSSBCCCCCB-TTTTCCSEEEEGGGCCCGGGGTTSEEEEECC
T ss_pred CCCCCCccCCCC-CcccCCceEEehhhhCCHhHcCCCEEEEEcC
Confidence 9 677654322 122112333322 22221 3456777774
No 173
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.49 E-value=1.9e-07 Score=93.35 Aligned_cols=100 Identities=21% Similarity=0.326 Sum_probs=78.9
Q ss_pred CcEEEECCCHHHHHHHHHHHH---CCCcEEEEccCCccCCc----------ccCHHHHHHHHHHHHhcCcEEEcCCcEEE
Q 012545 191 GKAVVVGGGYIGLELSAALKI---NNIDVSMVYPEPWCMPR----------LFTADIAAFYEGYYANKGIKIIKGTVAVG 257 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~---~g~~Vtli~~~~~~~~~----------~~~~~~~~~~~~~l~~~GV~v~~~~~v~~ 257 (461)
++|+|||+|+.|+.+|..|++ .|.+|+++++.+.+... ....++...+.+.+++.||+++. .++++
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~ 83 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIA-QSAEQ 83 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEEC-SCEEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEE-eEEEE
Confidence 689999999999999999999 79999999998864211 01223334456788889999985 68999
Q ss_pred EEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChhhh
Q 012545 258 FTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLF 295 (461)
Q Consensus 258 i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~~~ 295 (461)
++. ++. .|++++|+++.+|.+|+|+|.+|+...+
T Consensus 84 id~--~~~--~V~~~~g~~i~~d~lviAtG~~~~~~~i 117 (437)
T 3sx6_A 84 IDA--EAQ--NITLADGNTVHYDYLMIATGPKLAFENV 117 (437)
T ss_dssp EET--TTT--EEEETTSCEEECSEEEECCCCEECGGGS
T ss_pred EEc--CCC--EEEECCCCEEECCEEEECCCCCcCcccC
Confidence 976 332 5788999899999999999999876543
No 174
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.49 E-value=6.8e-07 Score=84.67 Aligned_cols=101 Identities=16% Similarity=0.212 Sum_probs=79.5
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEccCC--ccC-----------CcccCHHHHHHHHHHHHhcCcEEEcCCcEEEE
Q 012545 192 KAVVVGGGYIGLELSAALKINNIDVSMVYPEP--WCM-----------PRLFTADIAAFYEGYYANKGIKIIKGTVAVGF 258 (461)
Q Consensus 192 ~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~--~~~-----------~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i 258 (461)
+|+|||+|+.|+.+|..|++.|.+|+++++.. .+. +....+++.+.+.+.+++.|++++.+++|+.+
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i 82 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKL 82 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEE
Confidence 68999999999999999999999999997531 110 00113467788888899999999999999999
Q ss_pred EecCC-CCEEEEEeCCCcEEecCEEEEccCCCCCh
Q 012545 259 TTNAD-GEVKEVKLKDGRTLEADIVVVGVGGRPLI 292 (461)
Q Consensus 259 ~~~~~-g~~~~v~~~~G~~i~aD~vi~a~G~~p~~ 292 (461)
..+.+ +....+.+++|+++.+|.+|+|+|.+|..
T Consensus 83 ~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~ 117 (310)
T 1fl2_A 83 IPAAVEGGLHQIETASGAVLKARSIIVATGAKWRN 117 (310)
T ss_dssp ECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EecccCCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 75322 22457888899899999999999987654
No 175
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.49 E-value=2.9e-07 Score=90.54 Aligned_cols=121 Identities=17% Similarity=0.159 Sum_probs=72.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCC---CCCCC-ccccc---ccCCCC--------CCCCCCceee
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA---PYERP-ALSKA---YLFPEG--------TARLPGFHVC 69 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~---~~~~~-~~~~~---~~~~~~--------~~~~~~~~~~ 69 (461)
.+||+|||||++|+++|..|++.|++ |+|+|+.+.. ...+. .+... .+.... ......+...
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~---v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~ 78 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGID---NVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIA 78 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCC---EEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEE
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCC---EEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEE
Confidence 57999999999999999999999987 9999998631 00000 00000 000000 0000000000
Q ss_pred -------c-------CCC--------CCCCCHhHHHHcCcEEEcCCeEEEEeCCC---CEEEc-CCCc--EEecCEEEEc
Q 012545 70 -------V-------GSG--------GERLLPEWYKEKGIELILSTEIVRADIAS---KTLLS-ATGL--IFKYQILVIA 121 (461)
Q Consensus 70 -------~-------~~~--------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~---~~v~~-~~~~--~~~~d~liiA 121 (461)
. +.. ....+.+.+.+.+++++.+++|+++..+. -.|.+ .+|+ ++.+|.||.|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~A 158 (394)
T 1k0i_A 79 FAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGC 158 (394)
T ss_dssp ETTEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEEC
T ss_pred ECCceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEEC
Confidence 0 000 00112233345699999999999997642 35666 6776 6999999999
Q ss_pred cCCCccc
Q 012545 122 TGSTVSI 128 (461)
Q Consensus 122 tG~~~~~ 128 (461)
+|....+
T Consensus 159 dG~~S~v 165 (394)
T 1k0i_A 159 DGFHGIS 165 (394)
T ss_dssp CCTTCST
T ss_pred CCCCcHH
Confidence 9987743
No 176
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.48 E-value=6.2e-07 Score=91.93 Aligned_cols=102 Identities=12% Similarity=0.112 Sum_probs=81.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCC----------------------------------c--ccCHHH
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP----------------------------------R--LFTADI 234 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~----------------------------------~--~~~~~~ 234 (461)
.+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . .-.+++
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ei 89 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPEM 89 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHHHH
Confidence 4799999999999999999999999999999754210 0 013567
Q ss_pred HHHHHHHHHhcCc--EEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccC--CCCCh
Q 012545 235 AAFYEGYYANKGI--KIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVG--GRPLI 292 (461)
Q Consensus 235 ~~~~~~~l~~~GV--~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G--~~p~~ 292 (461)
.+.+.+.+++.|+ .++++++|++++.++++....|++++|+++.+|.||+|+| .+|+.
T Consensus 90 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~ 151 (545)
T 3uox_A 90 LRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRM 151 (545)
T ss_dssp HHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---
T ss_pred HHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcC
Confidence 7788888888888 7899999999987555556688999999999999999999 55554
No 177
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.48 E-value=9.8e-07 Score=86.96 Aligned_cols=99 Identities=14% Similarity=0.148 Sum_probs=79.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCC--------------c------c---------------------
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP--------------R------L--------------------- 229 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~--------------~------~--------------------- 229 (461)
..|+|||+|+.|+.+|..+++.|.+|+++++.+.+.. . .
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDFI 84 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHHH
Confidence 4699999999999999999999999999998764310 0 0
Q ss_pred ----------------------cCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecC---CCCEEEEEeCCCcEEecCEEEE
Q 012545 230 ----------------------FTADIAAFYEGYYANKGIKIIKGTVAVGFTTNA---DGEVKEVKLKDGRTLEADIVVV 284 (461)
Q Consensus 230 ----------------------~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~---~g~~~~v~~~~G~~i~aD~vi~ 284 (461)
...++.+.+.+.+++.||+++++++|+++..++ ++. ..|++.+| ++.||.||+
T Consensus 85 ~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~~~~g-~i~ad~VVl 162 (401)
T 2gqf_A 85 SLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-FVLQVNST-QWQCKNLIV 162 (401)
T ss_dssp HHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-EEEEETTE-EEEESEEEE
T ss_pred HHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-EEEEECCC-EEECCEEEE
Confidence 134555677888889999999999999998631 233 46777777 899999999
Q ss_pred ccCCCCC
Q 012545 285 GVGGRPL 291 (461)
Q Consensus 285 a~G~~p~ 291 (461)
|+|..+.
T Consensus 163 AtG~~s~ 169 (401)
T 2gqf_A 163 ATGGLSM 169 (401)
T ss_dssp CCCCSSC
T ss_pred CCCCccC
Confidence 9998874
No 178
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.46 E-value=1.3e-06 Score=87.47 Aligned_cols=100 Identities=24% Similarity=0.347 Sum_probs=80.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCC-------------------c----------------------
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP-------------------R---------------------- 228 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~-------------------~---------------------- 228 (461)
...|+|||+|..|+.+|..|++.|.+|+++++.+.+.. .
T Consensus 26 ~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (447)
T 2i0z_A 26 HYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNE 105 (447)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHH
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHH
Confidence 35799999999999999999999999999998763210 0
Q ss_pred --------------------cc-----CHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEE
Q 012545 229 --------------------LF-----TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVV 283 (461)
Q Consensus 229 --------------------~~-----~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi 283 (461)
.+ ...+.+.+.+.+++.||+++++++|+++.. +++.+..|++.+|+++.||.||
T Consensus 106 ~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~-~~~~v~~V~~~~G~~i~Ad~VV 184 (447)
T 2i0z_A 106 DIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEY-ENGQTKAVILQTGEVLETNHVV 184 (447)
T ss_dssp HHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTCCEEECSCEE
T ss_pred HHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEe-cCCcEEEEEECCCCEEECCEEE
Confidence 00 134455677778889999999999999986 3566678899999889999999
Q ss_pred EccCCCC
Q 012545 284 VGVGGRP 290 (461)
Q Consensus 284 ~a~G~~p 290 (461)
+|+|..+
T Consensus 185 lAtGg~s 191 (447)
T 2i0z_A 185 IAVGGKS 191 (447)
T ss_dssp ECCCCSS
T ss_pred ECCCCCc
Confidence 9999876
No 179
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.45 E-value=6.8e-08 Score=95.57 Aligned_cols=35 Identities=20% Similarity=0.391 Sum_probs=32.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHc--CCCCCcEEEEeCCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQ--GVKPGELAIISKEAV 42 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~--g~~~~~V~vie~~~~ 42 (461)
.+||+|||||++|+++|++|+++ |++ |+|+|+...
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~---V~vlE~~~~ 72 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRS---LLLVEEGGL 72 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSC---EEEECSSCS
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCe---EEEEeCCCC
Confidence 48999999999999999999999 887 999999753
No 180
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.45 E-value=3.5e-07 Score=94.74 Aligned_cols=36 Identities=22% Similarity=0.335 Sum_probs=32.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHc------CCCCCcEEEEeCCCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQ------GVKPGELAIISKEAVA 43 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~------g~~~~~V~vie~~~~~ 43 (461)
.+||+|||||+||+++|..|++. |++ |+|+||.+..
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~---V~vlEk~~~~ 76 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLR---VCLVEKAAHI 76 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCC---EEEECSSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCc---EEEEeCCCCC
Confidence 48999999999999999999998 887 9999998653
No 181
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.45 E-value=2.5e-07 Score=91.20 Aligned_cols=34 Identities=24% Similarity=0.502 Sum_probs=31.7
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 012545 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (461)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~ 42 (461)
++|+||||||+|+++|..|+++|++ |+|+|+.+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~---v~v~Er~~~ 35 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIK---VTIYERNSA 35 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSCS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCC---EEEEecCCC
Confidence 5899999999999999999999987 999999864
No 182
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.45 E-value=2.3e-06 Score=83.16 Aligned_cols=98 Identities=18% Similarity=0.260 Sum_probs=76.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC-cEEEEccCC------c------cCC-c---------------------------c
Q 012545 191 GKAVVVGGGYIGLELSAALKINNI-DVSMVYPEP------W------CMP-R---------------------------L 229 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~-~Vtli~~~~------~------~~~-~---------------------------~ 229 (461)
.+|+|||+|+.|+.+|..|++.|. +|+++++.+ . ++. . .
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 84 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDFGITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEEH 84 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSTTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCCSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCCCCCccccCcccccccCcchhcccCCchhhhhccccccccccccccC
Confidence 479999999999999999999999 999999875 0 000 0 0
Q ss_pred -cCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCC
Q 012545 230 -FTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPL 291 (461)
Q Consensus 230 -~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~ 291 (461)
....+.+.+.+.+++.|++++.+++|+++..++++ ..|.+.+| ++.+|.||+|+|..+.
T Consensus 85 ~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 85 ISGETYAEYLQVVANHYELNIFENTVVTNISADDAY--YTIATTTE-TYHADYIFVATGDYNF 144 (369)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS--EEEEESSC-CEEEEEEEECCCSTTS
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCe--EEEEeCCC-EEEeCEEEECCCCCCc
Confidence 01345666777888899999999999999873333 45777777 6999999999998654
No 183
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.43 E-value=6.3e-07 Score=91.81 Aligned_cols=55 Identities=22% Similarity=0.239 Sum_probs=39.6
Q ss_pred CCCcEEeCCCCCCCCCCEEEeCcccc-cCccccCcce-eeccHHHHHHHHHHHHHHHhcc
Q 012545 302 NKGGIETDDFFKTSADDVYAVGDVAT-FPMKLYREMR-RVEHVDHARKSAEQAVKTIMAT 359 (461)
Q Consensus 302 ~~g~i~vd~~~~t~~~~vya~GD~~~-~~~~~~~~~~-~~~~~~~A~~~g~~aa~~i~~~ 359 (461)
..|+|.+|.+.||++|++||+|+|+. ... |..+ .-.+...|...|+.|++++...
T Consensus 353 t~GGi~vd~~~~t~I~GLyAaGE~a~~g~h---Ganrl~gnsl~~~~vfG~~Ag~~aa~~ 409 (540)
T 1chu_A 353 TCGGVMVDDHGRTDVEGLYAIGEVSYTGLH---GANRMASNSLLECLVYGWSAAEDITRR 409 (540)
T ss_dssp ESCEEECCTTCBCSSBTEEECGGGEECSSS---TTSCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCcEEECCCCCCccCCEEecccccccccc---CCCcCcchhHHHHHHHHHHHHHHHHHh
Confidence 57999999999999999999999983 221 1110 0124556777789898888754
No 184
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.43 E-value=3.1e-06 Score=86.41 Aligned_cols=104 Identities=14% Similarity=0.231 Sum_probs=81.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCC--ccC-----------CcccCHHHHHHHHHHHHhcCcEEEcCCcE
Q 012545 189 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEP--WCM-----------PRLFTADIAAFYEGYYANKGIKIIKGTVA 255 (461)
Q Consensus 189 ~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~--~~~-----------~~~~~~~~~~~~~~~l~~~GV~v~~~~~v 255 (461)
...+|+|||+|+.|+.+|..|++.|.+|+++++.. .+. +....+++.+.+.+.+++.|++++.+++|
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v 290 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQSA 290 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECSCCE
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcCCEE
Confidence 34579999999999999999999999999997531 111 01124577888888999999999999999
Q ss_pred EEEEecCC-CCEEEEEeCCCcEEecCEEEEccCCCCCh
Q 012545 256 VGFTTNAD-GEVKEVKLKDGRTLEADIVVVGVGGRPLI 292 (461)
Q Consensus 256 ~~i~~~~~-g~~~~v~~~~G~~i~aD~vi~a~G~~p~~ 292 (461)
+++..+.+ +....|++.+|+++.+|.||+|+|.+|..
T Consensus 291 ~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~ 328 (521)
T 1hyu_A 291 SKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRN 328 (521)
T ss_dssp EEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCC
Confidence 99975222 23457888999999999999999977654
No 185
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.43 E-value=7.1e-07 Score=92.40 Aligned_cols=59 Identities=19% Similarity=0.217 Sum_probs=47.6
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEe---CCCc--EEecCEEEEccCCC
Q 012545 231 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKL---KDGR--TLEADIVVVGVGGR 289 (461)
Q Consensus 231 ~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~---~~G~--~i~aD~vi~a~G~~ 289 (461)
+..+.+.+.+.+++.||+++.++.|+++..++++++.+|.. .+|+ ++.++.||+|+|..
T Consensus 142 g~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~ 205 (588)
T 2wdq_A 142 GHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGA 205 (588)
T ss_dssp HHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCC
Confidence 45677788888888999999999999998743677777764 4665 58999999999963
No 186
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.42 E-value=4.2e-07 Score=93.03 Aligned_cols=45 Identities=13% Similarity=0.144 Sum_probs=34.7
Q ss_pred HHH-cCcEEEcCCeEEEEeCCC--C--EEEcCCCcEEecCEEEEccCCCcc
Q 012545 82 YKE-KGIELILSTEIVRADIAS--K--TLLSATGLIFKYQILVIATGSTVS 127 (461)
Q Consensus 82 ~~~-~~v~~~~~~~v~~i~~~~--~--~v~~~~~~~~~~d~liiAtG~~~~ 127 (461)
+.+ .|++++.+ +|++++.+. . .|.+.+|.++.+|.||.|+|....
T Consensus 185 a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 185 CTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp HHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCC
T ss_pred HHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchH
Confidence 345 79999999 699987543 2 456667677999999999998763
No 187
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.42 E-value=1.3e-06 Score=83.36 Aligned_cols=101 Identities=16% Similarity=0.144 Sum_probs=78.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCc-----------cCCc----ccCHHHHHHHHHHHHhcCcEEEcCCcE
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW-----------CMPR----LFTADIAAFYEGYYANKGIKIIKGTVA 255 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~-----------~~~~----~~~~~~~~~~~~~l~~~GV~v~~~~~v 255 (461)
.+|+|||+|+.|+.+|..|++.|.+|+++++... ..+. ....++.+.+.+.+++.|++++. .++
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~-~~v 87 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEM-DEV 87 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEE-CCE
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEe-eeE
Confidence 4799999999999999999999999999998721 0111 01346777888888999999987 589
Q ss_pred EEEEecC-CCCEEEEEeCCCcEEecCEEEEccCCCCCh
Q 012545 256 VGFTTNA-DGEVKEVKLKDGRTLEADIVVVGVGGRPLI 292 (461)
Q Consensus 256 ~~i~~~~-~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~ 292 (461)
+++.... ++....+.+.+|+++.+|.+|+|+|.+|..
T Consensus 88 ~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~ 125 (325)
T 2q7v_A 88 QGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRK 125 (325)
T ss_dssp EEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEECC
T ss_pred EEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 9998731 221135667788899999999999987754
No 188
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.42 E-value=1.7e-07 Score=86.46 Aligned_cols=35 Identities=20% Similarity=0.353 Sum_probs=33.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~ 42 (461)
++||+|||||||||+||..|+++|++ |+|+||.+.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~---V~v~Ek~~~ 36 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQ---VHLFDKSRG 36 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC---EEEEECCCC
Confidence 58999999999999999999999998 999999875
No 189
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.42 E-value=1.7e-06 Score=81.91 Aligned_cols=101 Identities=16% Similarity=0.136 Sum_probs=73.6
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEccCCc----------cC--CcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEE
Q 012545 192 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPW----------CM--PRLFTADIAAFYEGYYANKGIKIIKGTVAVGFT 259 (461)
Q Consensus 192 ~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~----------~~--~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~ 259 (461)
.|+|||+|+.|+.+|..+++.|.+|+++++... +. +...++++.+...+.+.+.+...+....+..+.
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMIT 87 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEee
Confidence 589999999999999999999999999987532 10 111234566666666666655545555666666
Q ss_pred ecCCCCEEEEEeCCCcEEecCEEEEccCCCCChh
Q 012545 260 TNADGEVKEVKLKDGRTLEADIVVVGVGGRPLIS 293 (461)
Q Consensus 260 ~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~ 293 (461)
..+++ ...+.+.+|+++.+|.||+|||.+|...
T Consensus 88 ~~~~~-~~~v~~~~g~~~~a~~liiATGs~p~~p 120 (304)
T 4fk1_A 88 KQSTG-LFEIVTKDHTKYLAERVLLATGMQEEFP 120 (304)
T ss_dssp ECTTS-CEEEEETTCCEEEEEEEEECCCCEEECC
T ss_pred ecCCC-cEEEEECCCCEEEeCEEEEccCCccccc
Confidence 53333 3578899999999999999999877543
No 190
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.41 E-value=8.3e-07 Score=85.01 Aligned_cols=99 Identities=12% Similarity=0.148 Sum_probs=77.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcc----CCcc------------CCc----ccCHHHHHHHHHHHHhcCcEEE
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYP----EPWC------------MPR----LFTADIAAFYEGYYANKGIKII 250 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~----~~~~------------~~~----~~~~~~~~~~~~~l~~~GV~v~ 250 (461)
.+|+|||+|+.|+.+|..|++.|.+|+++++ ...+ .+. ....++.+.+.+.+++.|++++
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~ 88 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTTIF 88 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCEEE
Confidence 4799999999999999999999999999998 2211 111 1234677788888899999999
Q ss_pred cCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChh
Q 012545 251 KGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLIS 293 (461)
Q Consensus 251 ~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~ 293 (461)
.++ ++++....+. ..|++ +|.++.+|.+|+|+|.+|...
T Consensus 89 ~~~-v~~i~~~~~~--~~v~~-~~~~~~~~~vv~A~G~~~~~~ 127 (333)
T 1vdc_A 89 TET-VTKVDFSSKP--FKLFT-DSKAILADAVILAIGAVAKRL 127 (333)
T ss_dssp CCC-CCEEECSSSS--EEEEC-SSEEEEEEEEEECCCEEECCC
T ss_pred EeE-EEEEEEcCCE--EEEEE-CCcEEEcCEEEECCCCCcCCC
Confidence 986 8888763222 45666 778999999999999877543
No 191
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.39 E-value=5.6e-07 Score=90.39 Aligned_cols=98 Identities=13% Similarity=0.234 Sum_probs=74.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
..+++|||+|++|+.+|..|++.|.+ |+++|+.+... +... .. ....+.+.+++
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~---V~lv~~~~~~l---~~~~---------~~-----------~~~~l~~~l~~ 220 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAE---VIVLEYMDRIL---PTMD---------LE-----------VSRAAERVFKK 220 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSC---TTSC---------HH-----------HHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCE---EEEEecCCccc---cccC---------HH-----------HHHHHHHHHHH
Confidence 47899999999999999999999876 99999986421 0000 00 01234566778
Q ss_pred cCcEEEcCCeEEEEeCCCCE--EEcCCCcEEecCEEEEccCCCccc
Q 012545 85 KGIELILSTEIVRADIASKT--LLSATGLIFKYQILVIATGSTVSI 128 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~--v~~~~~~~~~~d~liiAtG~~~~~ 128 (461)
.|++++.++++.+++.+.+. +.+.+++++++|.+|+|+|.+|..
T Consensus 221 ~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 221 QGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp HTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred CCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCcCC
Confidence 89999999999999866544 445578889999999999999854
No 192
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.39 E-value=3.2e-07 Score=90.85 Aligned_cols=39 Identities=15% Similarity=0.366 Sum_probs=32.3
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 012545 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (461)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~ 42 (461)
|| +.+||+|||||++|+++|..|++.|+++ |+|+|+.+.
T Consensus 1 M~-~~~dVvIVGaG~aGl~~A~~L~~~G~~~--v~v~E~~~~ 39 (410)
T 3c96_A 1 MS-EPIDILIAGAGIGGLSCALALHQAGIGK--VTLLESSSE 39 (410)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTCSE--EEEEESSSS
T ss_pred CC-CCCeEEEECCCHHHHHHHHHHHhCCCCe--EEEEECCCC
Confidence 54 4789999999999999999999987642 999999865
No 193
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.37 E-value=1.3e-07 Score=94.33 Aligned_cols=96 Identities=21% Similarity=0.330 Sum_probs=72.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCC--CcEEEEccCCccCCcccCH----------HHHHHHHHHHHhcCcEEEcCCcEEEE
Q 012545 191 GKAVVVGGGYIGLELSAALKINN--IDVSMVYPEPWCMPRLFTA----------DIAAFYEGYYANKGIKIIKGTVAVGF 258 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g--~~Vtli~~~~~~~~~~~~~----------~~~~~~~~~l~~~GV~v~~~~~v~~i 258 (461)
|+|+|||+|+.|+.+|..|++.+ .+||+|++.++..-...-+ ++...+.+.+++.||+++.+ +|++|
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~-~v~~I 81 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEe-EEEEE
Confidence 68999999999999999999865 7899999988643110111 11112345567789999866 79999
Q ss_pred EecCCCCEEEEEeCCCcEEecCEEEEccCCCCC
Q 012545 259 TTNADGEVKEVKLKDGRTLEADIVVVGVGGRPL 291 (461)
Q Consensus 259 ~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~ 291 (461)
+. +.+ .|++++|+++++|.+|+|+|.++.
T Consensus 82 d~--~~~--~V~~~~g~~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 82 DP--DAN--TVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp ET--TTT--EEEETTCCEEECSEEEECCCCEEE
T ss_pred EC--CCC--EEEECCCCEEECCEEEEeCCCCcc
Confidence 86 443 588999999999999999997653
No 194
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.37 E-value=5.9e-07 Score=93.94 Aligned_cols=39 Identities=23% Similarity=0.351 Sum_probs=35.0
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 012545 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (461)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~ 42 (461)
|+...+||||||||.||++||++|++.|.+ |+|+||.+.
T Consensus 1 M~~~~~DVvVIGgG~AGL~AAl~aae~G~~---V~vlEK~~~ 39 (660)
T 2bs2_A 1 MKVQYCDSLVIGGGLAGLRAAVATQQKGLS---TIVLSLIPV 39 (660)
T ss_dssp CCEEECSEEEECCSHHHHHHHHHHHTTTCC---EEEECSSCG
T ss_pred CCcccccEEEECchHHHHHHHHHHHHCCCc---EEEEeccCC
Confidence 555578999999999999999999999987 999999864
No 195
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.37 E-value=2.3e-06 Score=84.23 Aligned_cols=101 Identities=17% Similarity=0.152 Sum_probs=79.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCC----------------------------------------c--
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP----------------------------------------R-- 228 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~----------------------------------------~-- 228 (461)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. .
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~~ 86 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGEL 86 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCCE
Confidence 4799999999999999999999999999998754300 0
Q ss_pred -----------------ccCHHHHHHHHHHHHhc-CcEEEcCCcEEEEEecCCCCEE-EEEeCCCcEEecCEEEEccCCC
Q 012545 229 -----------------LFTADIAAFYEGYYANK-GIKIIKGTVAVGFTTNADGEVK-EVKLKDGRTLEADIVVVGVGGR 289 (461)
Q Consensus 229 -----------------~~~~~~~~~~~~~l~~~-GV~v~~~~~v~~i~~~~~g~~~-~v~~~~G~~i~aD~vi~a~G~~ 289 (461)
.....+.+.+.+.+++. |++++.+++|++++.++++ +. .|++.+|+++.+|.||.|.|..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~-v~g~v~~~~g~~~~ad~vV~AdG~~ 165 (399)
T 2x3n_A 87 LRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERH-AIDQVRLNDGRVLRPRVVVGADGIA 165 (399)
T ss_dssp EEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTS-CEEEEEETTSCEEEEEEEEECCCTT
T ss_pred EEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCc-eEEEEEECCCCEEECCEEEECCCCC
Confidence 00124556677777777 9999999999999874443 32 6888999899999999999987
Q ss_pred CCh
Q 012545 290 PLI 292 (461)
Q Consensus 290 p~~ 292 (461)
...
T Consensus 166 s~v 168 (399)
T 2x3n_A 166 SYV 168 (399)
T ss_dssp CHH
T ss_pred hHH
Confidence 754
No 196
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.35 E-value=6e-07 Score=91.32 Aligned_cols=36 Identities=17% Similarity=0.476 Sum_probs=32.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~ 42 (461)
+.+||+|||||++|+++|+.|+++|++ |+|+|+++.
T Consensus 2 ~~~DVvIIGgGi~G~~~A~~La~~G~~---V~llE~~~~ 37 (501)
T 2qcu_A 2 ETKDLIVIGGGINGAGIAADAAGRGLS---VLMLEAQDL 37 (501)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSST
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCC---EEEEECCCC
Confidence 468999999999999999999999987 999999863
No 197
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.35 E-value=1.8e-06 Score=86.51 Aligned_cols=102 Identities=21% Similarity=0.127 Sum_probs=76.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC--cEEEEccCCccCCcc--------------------------------------
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNI--DVSMVYPEPWCMPRL-------------------------------------- 229 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~--~Vtli~~~~~~~~~~-------------------------------------- 229 (461)
..+|+|||+|+.|+.+|..|++.|. +|+++++.+.+...+
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~~ 85 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPLY 85 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCCC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCchh
Confidence 5789999999999999999999999 999999875321000
Q ss_pred ---------------------------cCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCC---Cc---E
Q 012545 230 ---------------------------FTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKD---GR---T 276 (461)
Q Consensus 230 ---------------------------~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~---G~---~ 276 (461)
....+.+.+.+.+++.++.++++++|++++..+ + ...|++.+ |+ +
T Consensus 86 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~-~-~~~V~~~~~~~G~~~~~ 163 (447)
T 2gv8_A 86 RDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKD-G-SWVVTYKGTKAGSPISK 163 (447)
T ss_dssp TTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEET-T-EEEEEEEESSTTCCEEE
T ss_pred hhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCC-C-eEEEEEeecCCCCeeEE
Confidence 012455666777777788899999999998732 2 24566654 76 7
Q ss_pred EecCEEEEccCC--CCChh
Q 012545 277 LEADIVVVGVGG--RPLIS 293 (461)
Q Consensus 277 i~aD~vi~a~G~--~p~~~ 293 (461)
+.+|.||+|+|. .|+..
T Consensus 164 ~~~d~VVvAtG~~s~p~~p 182 (447)
T 2gv8_A 164 DIFDAVSICNGHYEVPYIP 182 (447)
T ss_dssp EEESEEEECCCSSSSBCBC
T ss_pred EEeCEEEECCCCCCCCCCC
Confidence 999999999998 66543
No 198
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.34 E-value=9.8e-07 Score=91.17 Aligned_cols=36 Identities=28% Similarity=0.388 Sum_probs=32.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~ 43 (461)
.+||+|||+|++|+++|..|++.|.+ |+|+|+.+..
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~---v~~~e~~~~~ 161 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAK---VILLEKEPIP 161 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCC---EEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCc---EEEEecCCCC
Confidence 57999999999999999999999987 9999998753
No 199
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.34 E-value=7e-07 Score=85.15 Aligned_cols=35 Identities=20% Similarity=0.297 Sum_probs=32.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHc--CCCCCcEEEEeCCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQ--GVKPGELAIISKEAV 42 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~--g~~~~~V~vie~~~~ 42 (461)
.+||+|||||++|+++|..|+++ |++ |+|+|+.+.
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~---V~LiEk~~~ 115 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLR---ITIVEAGVA 115 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSC---EEEEESSSS
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCE---EEEEeCCCc
Confidence 58999999999999999999997 876 999999865
No 200
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.33 E-value=9.6e-07 Score=87.33 Aligned_cols=96 Identities=17% Similarity=0.299 Sum_probs=75.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
.++++|||+|+.|+.+|..|++.|.+ |+++++.+... .+ . ++. .......+.+++
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l-~~------~--------~~~-------~~~~~l~~~l~~ 199 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVH---VSLVETQPRLM-SR------A--------APA-------TLADFVARYHAA 199 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSSS-TT------T--------SCH-------HHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCE---EEEEEeCCccc-cc------c--------cCH-------HHHHHHHHHHHH
Confidence 57999999999999999999999876 99999986411 00 0 000 001234566788
Q ss_pred cCcEEEcCCeEEEEeCCCCEEEcCCCcEEecCEEEEccCCCcc
Q 012545 85 KGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVS 127 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~liiAtG~~~~ 127 (461)
.||+++.++.+.+++ ++ .+.+.+|+++++|.+|+|+|.+|.
T Consensus 200 ~GV~i~~~~~v~~i~-~~-~v~~~~g~~i~~D~vi~a~G~~p~ 240 (408)
T 2gqw_A 200 QGVDLRFERSVTGSV-DG-VVLLDDGTRIAADMVVVGIGVLAN 240 (408)
T ss_dssp TTCEEEESCCEEEEE-TT-EEEETTSCEEECSEEEECSCEEEC
T ss_pred cCcEEEeCCEEEEEE-CC-EEEECCCCEEEcCEEEECcCCCcc
Confidence 999999999999998 44 788888888999999999999884
No 201
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.33 E-value=2e-06 Score=87.71 Aligned_cols=61 Identities=18% Similarity=0.310 Sum_probs=50.9
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCCh
Q 012545 231 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 292 (461)
Q Consensus 231 ~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~ 292 (461)
...+.+.+.+.+++.|++++.+ +|+++..++++.+..|++.+|+++.+|.||.|.|.....
T Consensus 172 ~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~ 232 (511)
T 2weu_A 172 ADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLL 232 (511)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCC
T ss_pred HHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHH
Confidence 3456777788888899999999 999998755677778999999899999999999976543
No 202
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.33 E-value=2e-06 Score=85.26 Aligned_cols=101 Identities=15% Similarity=0.216 Sum_probs=80.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccC--------Cc----------------------------------
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM--------PR---------------------------------- 228 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~--------~~---------------------------------- 228 (461)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+... +.
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKEIA 85 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCeeE
Confidence 479999999999999999999999999999875210 00
Q ss_pred -----------------ccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCc--EEecCEEEEccCCC
Q 012545 229 -----------------LFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGR--TLEADIVVVGVGGR 289 (461)
Q Consensus 229 -----------------~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~--~i~aD~vi~a~G~~ 289 (461)
.-...+.+.+.+.+++.|++++.+++|+++..++++....+.+.+|+ ++.+|.||.|+|..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~ 165 (421)
T 3nix_A 86 DFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYG 165 (421)
T ss_dssp EEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGG
T ss_pred EEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCc
Confidence 00124456677777888999999999999987555555677788897 79999999999987
Q ss_pred CC
Q 012545 290 PL 291 (461)
Q Consensus 290 p~ 291 (461)
..
T Consensus 166 s~ 167 (421)
T 3nix_A 166 RV 167 (421)
T ss_dssp CH
T ss_pred hh
Confidence 63
No 203
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.32 E-value=2.5e-06 Score=81.08 Aligned_cols=98 Identities=12% Similarity=0.101 Sum_probs=75.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCc-----------cCCc----ccCHHHHHHHHHHHHhcCcEEEcCCcE
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW-----------CMPR----LFTADIAAFYEGYYANKGIKIIKGTVA 255 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~-----------~~~~----~~~~~~~~~~~~~l~~~GV~v~~~~~v 255 (461)
.+|+|||+|+.|+.+|..|++.|.+|+++++... ..+. ....++.+.+.+.+++.|++++.++ +
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v 84 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDH-I 84 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCCEEECCSSTTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECCC-E
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEccCCCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEee-e
Confidence 4799999999999999999999999999986420 0111 1235777788888999999999886 8
Q ss_pred EEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCCh
Q 012545 256 VGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 292 (461)
Q Consensus 256 ~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~ 292 (461)
+.+... ++. ..+ +.+|.++.+|.+|+|+|.+|..
T Consensus 85 ~~i~~~-~~~-~~v-~~~~~~~~~~~lv~AtG~~~~~ 118 (320)
T 1trb_A 85 NKVDLQ-NRP-FRL-NGDNGEYTCDALIIATGASARY 118 (320)
T ss_dssp EEEECS-SSS-EEE-EESSCEEEEEEEEECCCEEECC
T ss_pred eEEEec-CCE-EEE-EeCCCEEEcCEEEECCCCCcCC
Confidence 888763 232 344 6678899999999999987654
No 204
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.32 E-value=3.4e-06 Score=80.20 Aligned_cols=98 Identities=13% Similarity=0.126 Sum_probs=75.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCc-----------cCCc---ccCHHHHHHHHHHHHhcCcEEEcCCcEE
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW-----------CMPR---LFTADIAAFYEGYYANKGIKIIKGTVAV 256 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~-----------~~~~---~~~~~~~~~~~~~l~~~GV~v~~~~~v~ 256 (461)
.+|+|||+|+.|+.+|..|++.|.+|+++++... ..+. ....++.+.+.+.+++.|++++. .+++
T Consensus 17 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~ 95 (319)
T 3cty_A 17 FDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREG-VEVR 95 (319)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEET-CCEE
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEE-eeEE
Confidence 5799999999999999999999999999998421 0111 11356777788888999999998 6899
Q ss_pred EEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCCh
Q 012545 257 GFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 292 (461)
Q Consensus 257 ~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~ 292 (461)
++....+ ...|.+ ++.++.+|.+|+|+|..|..
T Consensus 96 ~i~~~~~--~~~v~~-~~~~~~~~~li~AtG~~~~~ 128 (319)
T 3cty_A 96 SIKKTQG--GFDIET-NDDTYHAKYVIITTGTTHKH 128 (319)
T ss_dssp EEEEETT--EEEEEE-SSSEEEEEEEEECCCEEECC
T ss_pred EEEEeCC--EEEEEE-CCCEEEeCEEEECCCCCccc
Confidence 9886222 234666 56689999999999987654
No 205
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.32 E-value=4.5e-07 Score=89.70 Aligned_cols=98 Identities=21% Similarity=0.284 Sum_probs=75.2
Q ss_pred CcEEEECCCHHHHHHHHHHHH---CCCcEEEEccCCccCCc----------ccCHHHHHHHHHHHHhcCcEEEcCCcEEE
Q 012545 191 GKAVVVGGGYIGLELSAALKI---NNIDVSMVYPEPWCMPR----------LFTADIAAFYEGYYANKGIKIIKGTVAVG 257 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~---~g~~Vtli~~~~~~~~~----------~~~~~~~~~~~~~l~~~GV~v~~~~~v~~ 257 (461)
++|+|||+|+.|+.+|..|++ .|.+|+++++.+.+... ....++...+.+.+++.|++++.+ +|++
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~ 80 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEG-TVEK 80 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEEC-EEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEe-eEEE
Confidence 479999999999999999999 89999999988754211 012233445667778889999987 8999
Q ss_pred EEecCCCCEEEEEeCCCc----EEecCEEEEccCCCCChh
Q 012545 258 FTTNADGEVKEVKLKDGR----TLEADIVVVGVGGRPLIS 293 (461)
Q Consensus 258 i~~~~~g~~~~v~~~~G~----~i~aD~vi~a~G~~p~~~ 293 (461)
++. ++. .|++.+++ ++.+|.+|+|+|.+|+..
T Consensus 81 i~~--~~~--~V~~~~g~~~~~~~~~d~lViAtG~~~~~~ 116 (409)
T 3h8l_A 81 IDA--KSS--MVYYTKPDGSMAEEEYDYVIVGIGAHLATE 116 (409)
T ss_dssp EET--TTT--EEEEECTTSCEEEEECSEEEECCCCEECGG
T ss_pred EeC--CCC--EEEEccCCcccceeeCCEEEECCCCCcCcc
Confidence 876 333 35566664 399999999999988765
No 206
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.31 E-value=5.3e-07 Score=87.86 Aligned_cols=99 Identities=22% Similarity=0.320 Sum_probs=73.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCC--ccc--------C-HHHHHHHHHHHHhcCcEEEcCCcEEE
Q 012545 189 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP--RLF--------T-ADIAAFYEGYYANKGIKIIKGTVAVG 257 (461)
Q Consensus 189 ~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~--~~~--------~-~~~~~~~~~~l~~~GV~v~~~~~v~~ 257 (461)
.+.+++|||+|+.|+.+|..|++.| +|+++++.+.... ..+ + .++.....+.+++.||+++.+++|+.
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g~~v~~ 85 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEAKL 85 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEECSCCEEE
T ss_pred CCCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEECCEEEE
Confidence 4789999999999999999999999 9999998875321 001 1 11112234667788999999999999
Q ss_pred EEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChh
Q 012545 258 FTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLIS 293 (461)
Q Consensus 258 i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~ 293 (461)
++. +.. .|+ .+|+++.+|.+|+|||.+|...
T Consensus 86 id~--~~~--~V~-~~g~~~~~d~lViATGs~p~~p 116 (367)
T 1xhc_A 86 IDR--GRK--VVI-TEKGEVPYDTLVLATGARAREP 116 (367)
T ss_dssp EET--TTT--EEE-ESSCEEECSEEEECCCEEECCC
T ss_pred EEC--CCC--EEE-ECCcEEECCEEEECCCCCCCCC
Confidence 976 333 355 6778999999999999887654
No 207
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.31 E-value=1.5e-06 Score=86.54 Aligned_cols=101 Identities=27% Similarity=0.438 Sum_probs=76.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC--cEEEEccCCccCC------c-cc-----CHHHHHHHHHHHHhcCcEEEcCCcE
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNI--DVSMVYPEPWCMP------R-LF-----TADIAAFYEGYYANKGIKIIKGTVA 255 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~--~Vtli~~~~~~~~------~-~~-----~~~~~~~~~~~l~~~GV~v~~~~~v 255 (461)
..+++|||+|+.|+.+|..|++.|. +|+++++.+.+.. . ++ ..++.....+.+++.||+++.+++|
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 83 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLGGTQV 83 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEECSCCE
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEeCCEE
Confidence 4689999999999999999999997 7999998764210 0 00 0011111245677889999999999
Q ss_pred EEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChhh
Q 012545 256 VGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISL 294 (461)
Q Consensus 256 ~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~~ 294 (461)
+.+.. ++. .|.+.+|+++.+|.+|+|+|.+|+...
T Consensus 84 ~~i~~--~~~--~v~~~~g~~~~~d~lviAtG~~p~~~~ 118 (431)
T 1q1r_A 84 TAINR--DRQ--QVILSDGRALDYDRLVLATGGRPRPLP 118 (431)
T ss_dssp EEEET--TTT--EEEETTSCEEECSEEEECCCEEECCCG
T ss_pred EEEEC--CCC--EEEECCCCEEECCEEEEcCCCCccCCC
Confidence 99986 332 577888989999999999998886543
No 208
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.30 E-value=3.1e-06 Score=83.29 Aligned_cols=101 Identities=20% Similarity=0.333 Sum_probs=75.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCc-----ccCHHHHH----------------------------
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR-----LFTADIAA---------------------------- 236 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~-----~~~~~~~~---------------------------- 236 (461)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+..... .+.+...+
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~ 84 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTGE 84 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCCC
Confidence 468999999999999999999999999999987653111 01222211
Q ss_pred ---------------HHHHHHHh--cCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCCh
Q 012545 237 ---------------FYEGYYAN--KGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 292 (461)
Q Consensus 237 ---------------~~~~~l~~--~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~ 292 (461)
.+.+.|.+ .|++++++++|++++.++++ ..|++.+|+++.+|.||.|.|.....
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~--v~v~~~~g~~~~ad~vV~AdG~~S~v 155 (397)
T 2vou_A 85 RVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSET--VQMRFSDGTKAEANWVIGADGGASVV 155 (397)
T ss_dssp EEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSC--EEEEETTSCEEEESEEEECCCTTCHH
T ss_pred ccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCE--EEEEECCCCEEECCEEEECCCcchhH
Confidence 12222222 38899999999999874443 46888999999999999999987654
No 209
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.30 E-value=3.6e-07 Score=91.07 Aligned_cols=98 Identities=20% Similarity=0.349 Sum_probs=75.2
Q ss_pred CcEEEECCCHHHHHHHHHHHH--CCCcEEEEccCCccCCccc----------CHHHHHHHHHHHHhcCcEEEcCCcEEEE
Q 012545 191 GKAVVVGGGYIGLELSAALKI--NNIDVSMVYPEPWCMPRLF----------TADIAAFYEGYYANKGIKIIKGTVAVGF 258 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~--~g~~Vtli~~~~~~~~~~~----------~~~~~~~~~~~l~~~GV~v~~~~~v~~i 258 (461)
++|+|||+|+.|+.+|..|++ .|.+|+++++.+.+..... ..++...+.+.+++.|++++.+ +++.+
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~i 81 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEE-EEEEE
Confidence 589999999999999999999 7899999999886532100 1111222345667789999964 88999
Q ss_pred EecCCCCEEEEEeCCCcEEecCEEEEccCCCCChh
Q 012545 259 TTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLIS 293 (461)
Q Consensus 259 ~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~ 293 (461)
+. +.. .|.+++|+++.+|.+|+|+|.+|+.+
T Consensus 82 d~--~~~--~v~~~~g~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 82 DP--DAN--TVTTQSGKKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp ET--TTT--EEEETTCCEEECSEEEECCCCEEECC
T ss_pred EC--CCC--EEEECCCcEEECCEEEEcCCcccccC
Confidence 76 332 57888998999999999999987654
No 210
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.30 E-value=7.7e-06 Score=78.25 Aligned_cols=97 Identities=11% Similarity=0.061 Sum_probs=71.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCc-------------------ccCHHHHHHHHH-----------
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR-------------------LFTADIAAFYEG----------- 240 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~-------------------~~~~~~~~~~~~----------- 240 (461)
..|+|||+|++|+.+|..|++.|.+|+++++.+.+... ...+.+.+.+.+
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEWT 82 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEEC
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeecc
Confidence 47999999999999999999999999999988643110 012333332222
Q ss_pred --------------------------------HHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEe-cCEEEEccC
Q 012545 241 --------------------------------YYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLE-ADIVVVGVG 287 (461)
Q Consensus 241 --------------------------------~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~-aD~vi~a~G 287 (461)
.+. .|++++++++|++++.++++ ..|++.+|+.+. +|.||.|+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~g~~i~~~~~v~~i~~~~~~--~~v~~~~g~~~~~a~~vV~a~g 159 (336)
T 1yvv_A 83 PLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMR-GDMPVSFSCRITEVFRGEEH--WNLLDAEGQNHGPFSHVIIATP 159 (336)
T ss_dssp CCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHH-TTCCEECSCCEEEEEECSSC--EEEEETTSCEEEEESEEEECSC
T ss_pred ccceeccCcccccCCCCCccEEcCccHHHHHHHHH-ccCcEEecCEEEEEEEeCCE--EEEEeCCCcCccccCEEEEcCC
Confidence 222 28899999999999985444 468889998765 999999999
Q ss_pred CCC
Q 012545 288 GRP 290 (461)
Q Consensus 288 ~~p 290 (461)
...
T Consensus 160 ~~~ 162 (336)
T 1yvv_A 160 APQ 162 (336)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 211
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.30 E-value=9.9e-07 Score=86.48 Aligned_cols=98 Identities=14% Similarity=0.211 Sum_probs=74.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
..+++|||+|+.|+.+|..|++.|.+ |+++++.+... .+ . .+. .....+.+.+++
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~~-~~------~--------~~~-------~~~~~l~~~l~~ 199 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQ---LDVVAPCEQVM-PG------L--------LHP-------AAAKAVQAGLEG 199 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSSS-TT------T--------SCH-------HHHHHHHHHHHT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCe---EEEEecCcchh-hc------c--------cCH-------HHHHHHHHHHHH
Confidence 57899999999999999999999876 99999985411 00 0 000 001234566778
Q ss_pred cCcEEEcCCeEEEEeCCCC--EEEcCCCcEEecCEEEEccCCCcc
Q 012545 85 KGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVS 127 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~liiAtG~~~~ 127 (461)
.|++++.++.+.+++.+.. .+.+.+|+++++|.+|+|+|.+|.
T Consensus 200 ~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~ 244 (384)
T 2v3a_A 200 LGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPR 244 (384)
T ss_dssp TTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEEC
T ss_pred cCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCCcC
Confidence 8999999999999876543 466778888999999999999884
No 212
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.30 E-value=2.1e-06 Score=84.56 Aligned_cols=101 Identities=25% Similarity=0.348 Sum_probs=74.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC--CcEEEEccCCccCCcccCHHHH---------HHHHHHHHhcCcEEEcCCcEEEE
Q 012545 190 NGKAVVVGGGYIGLELSAALKINN--IDVSMVYPEPWCMPRLFTADIA---------AFYEGYYANKGIKIIKGTVAVGF 258 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g--~~Vtli~~~~~~~~~~~~~~~~---------~~~~~~l~~~GV~v~~~~~v~~i 258 (461)
+|+|+|||+|+.|+.+|..|++.+ .+|++|++.+..........+. ..-.+.+.+.||+++.+ +|++|
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~~-~v~~i 80 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVHD-SALGI 80 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEECS-CEEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEEe-EEEEE
Confidence 689999999999999999998865 5899999887532211111111 01124456789999865 78899
Q ss_pred EecCCCCEEEEEeCCCcEEecCEEEEccCCCCChhhh
Q 012545 259 TTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLF 295 (461)
Q Consensus 259 ~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~~~ 295 (461)
+. +.+ .+.+.+|+++.+|.+|+|+|.+++....
T Consensus 81 d~--~~~--~v~~~~g~~i~yd~LviAtG~~~~~~~i 113 (401)
T 3vrd_B 81 DP--DKK--LVKTAGGAEFAYDRCVVAPGIDLLYDKI 113 (401)
T ss_dssp ET--TTT--EEEETTSCEEECSEEEECCCEEECGGGS
T ss_pred Ec--cCc--EEEecccceeecceeeeccCCccccCCc
Confidence 76 333 5788999999999999999988876543
No 213
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.30 E-value=1.2e-06 Score=86.47 Aligned_cols=97 Identities=16% Similarity=0.351 Sum_probs=74.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC--cEEEEccCCccCCc-------c-----cCHHHHHHHHHHHHhcCcEEEcCCcEE
Q 012545 191 GKAVVVGGGYIGLELSAALKINNI--DVSMVYPEPWCMPR-------L-----FTADIAAFYEGYYANKGIKIIKGTVAV 256 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~--~Vtli~~~~~~~~~-------~-----~~~~~~~~~~~~l~~~GV~v~~~~~v~ 256 (461)
++|+|||+|+.|+.+|..|++.|. +|+++++.+...-. + ...++.....+.+++.|++++. .+++
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~-~~v~ 80 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELIS-DRMV 80 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEEC-CCEE
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEE-EEEE
Confidence 689999999999999999999998 89999987632110 0 0111222345667788999999 9999
Q ss_pred EEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCCh
Q 012545 257 GFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 292 (461)
Q Consensus 257 ~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~ 292 (461)
+++. +.+ .+.+.+|+++.+|.+|+|+|.+|..
T Consensus 81 ~id~--~~~--~v~~~~g~~~~~d~lvlAtG~~p~~ 112 (404)
T 3fg2_P 81 SIDR--EGR--KLLLASGTAIEYGHLVLATGARNRM 112 (404)
T ss_dssp EEET--TTT--EEEESSSCEEECSEEEECCCEEECC
T ss_pred EEEC--CCC--EEEECCCCEEECCEEEEeeCCCccC
Confidence 9986 333 5788899999999999999987654
No 214
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.29 E-value=1.1e-06 Score=88.08 Aligned_cols=100 Identities=20% Similarity=0.261 Sum_probs=74.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHH
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (461)
..++++|||+|++|+.+|..|++.|.+ |+++|+.+... . . .+ . . .....+.+.++
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~---Vtlv~~~~~~l-~-----~-~~-~---~-----------~~~~~l~~~l~ 202 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKK---VTVIDILDRPL-G-----V-YL-D---K-----------EFTDVLTEEME 202 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSTT-T-----T-TC-C---H-----------HHHHHHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCe---EEEEecCcccc-c-----c-cC-C---H-----------HHHHHHHHHHH
Confidence 457999999999999999999999876 99999986421 0 0 00 0 0 00123456677
Q ss_pred HcCcEEEcCCeEEEEeCCCC--EEEcCCCcEEecCEEEEccCCCcccc
Q 012545 84 EKGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVSIT 129 (461)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~liiAtG~~~~~~ 129 (461)
+.|++++.++.+.+++.+++ .+.+ ++.++++|.+|+|+|.+|..+
T Consensus 203 ~~gv~i~~~~~v~~i~~~~~v~~v~~-~~~~i~~d~vi~a~G~~p~~~ 249 (447)
T 1nhp_A 203 ANNITIATGETVERYEGDGRVQKVVT-DKNAYDADLVVVAVGVRPNTA 249 (447)
T ss_dssp TTTEEEEESCCEEEEECSSBCCEEEE-SSCEEECSEEEECSCEEESCG
T ss_pred hCCCEEEcCCEEEEEEccCcEEEEEE-CCCEEECCEEEECcCCCCChH
Confidence 88999999999999987643 2555 456799999999999988543
No 215
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.28 E-value=2.6e-06 Score=81.66 Aligned_cols=100 Identities=12% Similarity=0.121 Sum_probs=77.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCc---c--------CCc----ccCHHHHHHHHHHHHhcCcEEEcCCc
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW---C--------MPR----LFTADIAAFYEGYYANKGIKIIKGTV 254 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~---~--------~~~----~~~~~~~~~~~~~l~~~GV~v~~~~~ 254 (461)
..+|+|||+|+.|+.+|..|++.|.+|+++++... + .+. ....++.+.+.+.+++.|++++.++
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~- 92 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRMED- 92 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEECCC-
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEEEee-
Confidence 45799999999999999999999999999985311 0 111 1135677788888889999999986
Q ss_pred EEEEEecCCCCEEEE-EeCCCcEEecCEEEEccCCCCChh
Q 012545 255 AVGFTTNADGEVKEV-KLKDGRTLEADIVVVGVGGRPLIS 293 (461)
Q Consensus 255 v~~i~~~~~g~~~~v-~~~~G~~i~aD~vi~a~G~~p~~~ 293 (461)
+++++. .+. ..| .+.+|+++.+|.+|+|+|.+|...
T Consensus 93 v~~i~~-~~~--~~v~~~~~g~~~~~d~lviAtG~~~~~~ 129 (335)
T 2a87_A 93 VESVSL-HGP--LKSVVTADGQTHRARAVILAMGAAARYL 129 (335)
T ss_dssp EEEEEC-SSS--SEEEEETTSCEEEEEEEEECCCEEECCC
T ss_pred EEEEEe-CCc--EEEEEeCCCCEEEeCEEEECCCCCccCC
Confidence 888875 222 245 678888999999999999876543
No 216
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.27 E-value=3.2e-06 Score=83.57 Aligned_cols=99 Identities=21% Similarity=0.407 Sum_probs=75.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCc--EEEEccCCccCCc--ccCHHHH---------HHHHHHHHhcCcEEEcCCcEEE
Q 012545 191 GKAVVVGGGYIGLELSAALKINNID--VSMVYPEPWCMPR--LFTADIA---------AFYEGYYANKGIKIIKGTVAVG 257 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~--Vtli~~~~~~~~~--~~~~~~~---------~~~~~~l~~~GV~v~~~~~v~~ 257 (461)
++|+|||+|+.|+.+|..|++.|.+ |+++++.+...-. .+..... ....+.+++.|++++.+++++.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 82 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPILAEADWYGEARIDMLTGPEVTA 82 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCBSSCTTHHHHTTCEEEESCCEEE
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHhcCCHHHHHHCCCEEEeCCEEEE
Confidence 4899999999999999999999987 9999988753211 0111111 1123456788999999999999
Q ss_pred EEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChh
Q 012545 258 FTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLIS 293 (461)
Q Consensus 258 i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~ 293 (461)
++. +.+ .|.+.+|+++.+|.+|+|+|.+|...
T Consensus 83 id~--~~~--~v~~~~g~~~~~d~lvlAtG~~p~~~ 114 (410)
T 3ef6_A 83 LDV--QTR--TISLDDGTTLSADAIVIATGSRARTM 114 (410)
T ss_dssp EET--TTT--EEEETTSCEEECSEEEECCCEEECCC
T ss_pred EEC--CCC--EEEECCCCEEECCEEEEccCCcccCC
Confidence 986 332 57888999999999999999876543
No 217
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.27 E-value=8.2e-07 Score=92.17 Aligned_cols=35 Identities=26% Similarity=0.315 Sum_probs=32.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~ 42 (461)
.+||||||||+||++||++|++.|.+ |+|+||...
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~---V~vlEK~~~ 52 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFN---TACVTKLFP 52 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCG
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCc---EEEEeccCC
Confidence 57999999999999999999999987 999999853
No 218
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.26 E-value=2e-06 Score=86.18 Aligned_cols=98 Identities=15% Similarity=0.067 Sum_probs=75.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
..+++|||||+.|+.+|..|++.|.+ |+++++.+... +.+.. . ....+.+.+++
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~l---~~~~~---------~-----------~~~~l~~~l~~ 220 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAK---THLFEMFDAPL---PSFDP---------M-----------ISETLVEVMNA 220 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSS---TTSCH---------H-----------HHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCE---EEEEEeCCchh---hhhhH---------H-----------HHHHHHHHHHH
Confidence 46899999999999999999999876 99999885311 00000 0 01234566778
Q ss_pred cCcEEEcCCeEEEEeCCC---CEEEcCCCcEEecCEEEEccCCCccc
Q 012545 85 KGIELILSTEIVRADIAS---KTLLSATGLIFKYQILVIATGSTVSI 128 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~---~~v~~~~~~~~~~d~liiAtG~~~~~ 128 (461)
.|++++.++.+.+++.+. ..+.+.+|+++++|.+|+|+|.+|+.
T Consensus 221 ~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~ 267 (450)
T 1ges_A 221 EGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPAN 267 (450)
T ss_dssp HSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred CCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 899999999999998643 25777888889999999999999854
No 219
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.25 E-value=1.5e-06 Score=89.35 Aligned_cols=35 Identities=23% Similarity=0.284 Sum_probs=32.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~ 42 (461)
.+||+|||||++|+++|..|++.|.+ |+|+|+.+.
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~---V~vlEr~~~ 60 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVG---HLVVEQTDG 60 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC---EEEEeCCCC
Confidence 57999999999999999999999987 999999865
No 220
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.24 E-value=7.9e-06 Score=84.27 Aligned_cols=99 Identities=16% Similarity=0.083 Sum_probs=77.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCc-cC-----------------------Ccc-----------------
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW-CM-----------------------PRL----------------- 229 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~-~~-----------------------~~~----------------- 229 (461)
-.|+|||+|..|+++|..+++.|.+|.++++.+. +. ...
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l~~ 108 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNA 108 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhhhc
Confidence 4799999999999999999999999999998631 10 000
Q ss_pred ------------cC-HHHHHHHHHHHHh-cCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCC
Q 012545 230 ------------FT-ADIAAFYEGYYAN-KGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPL 291 (461)
Q Consensus 230 ------------~~-~~~~~~~~~~l~~-~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~ 291 (461)
.+ ..+.+.+.+.+++ .|++++ +.+|+++.. +++.+..|.+.+|.++.||.||+|+|..++
T Consensus 109 ~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~-e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 109 SKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIV-ENDRVVGAVTQMGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEE-SSSBEEEEEETTSEEEEEEEEEECCSTTTC
T ss_pred ccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEe-cCCEEEEEEECCCCEEECCEEEEcCCCCcc
Confidence 01 1345566777777 699995 679999986 456777899999989999999999998653
No 221
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.23 E-value=1.7e-06 Score=86.98 Aligned_cols=97 Identities=20% Similarity=0.284 Sum_probs=72.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
..+++|||||+.|+.+|..|++.|.+ |+|+++.+... +... .. ......+.+++
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~l---~~~~---------~~-----------~~~~l~~~l~~ 224 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQ---VSVVEARERIL---PTYD---------SE-----------LTAPVAESLKK 224 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCE---EEEECSSSSSS---TTSC---------HH-----------HHHHHHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCe---EEEEEcCCccc---cccC---------HH-----------HHHHHHHHHHH
Confidence 47899999999999999999999876 99999986421 0000 00 01234566778
Q ss_pred cCcEEEcCCeEEEEeCCCCEEEc--CCC--cEEecCEEEEccCCCcccc
Q 012545 85 KGIELILSTEIVRADIASKTLLS--ATG--LIFKYQILVIATGSTVSIT 129 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~v~~--~~~--~~~~~d~liiAtG~~~~~~ 129 (461)
.||+++.++.+.+++. ++ +.+ .+| +++.+|.+++|+|.+|..+
T Consensus 225 ~gv~i~~~~~v~~i~~-~~-v~v~~~~G~~~~i~~D~vv~a~G~~p~~~ 271 (458)
T 1lvl_A 225 LGIALHLGHSVEGYEN-GC-LLANDGKGGQLRLEADRVLVAVGRRPRTK 271 (458)
T ss_dssp HTCEEETTCEEEEEET-TE-EEEECSSSCCCEECCSCEEECCCEEECCS
T ss_pred CCCEEEECCEEEEEEe-CC-EEEEECCCceEEEECCEEEECcCCCcCCC
Confidence 8999999999999987 43 433 345 5799999999999998543
No 222
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.23 E-value=1.4e-06 Score=91.26 Aligned_cols=36 Identities=17% Similarity=0.279 Sum_probs=32.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHHH-cCCCCCcEEEEeCCCC
Q 012545 4 KSFKYVILGGGVSAGYAAREFAK-QGVKPGELAIISKEAV 42 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~-~g~~~~~V~vie~~~~ 42 (461)
..+||+|||||++|+++|..|++ .|++ |+|||+.+.
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~---V~viEr~~~ 67 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIR---TCIVEQKEG 67 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSC---EEEECSSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCC---EEEEeCCCC
Confidence 35799999999999999999999 8987 999999865
No 223
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.23 E-value=4.1e-06 Score=79.23 Aligned_cols=101 Identities=15% Similarity=0.054 Sum_probs=75.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEE-EccCCc---c--------CCc----ccCHHHHHHHHHHHHhcCcEEEcCC
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSM-VYPEPW---C--------MPR----LFTADIAAFYEGYYANKGIKIIKGT 253 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtl-i~~~~~---~--------~~~----~~~~~~~~~~~~~l~~~GV~v~~~~ 253 (461)
..+|+|||+|+.|+.+|..|++.|.+|++ +++... + .+. ....++...+.+.+++.|++++.+
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~- 82 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEMV- 82 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSSTTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEECC-
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCCCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEEEE-
Confidence 45899999999999999999999999999 887321 0 111 112578888889999999999988
Q ss_pred cEEEEEecCCCCEEEE-EeCCCcEEecCEEEEccCCCCChh
Q 012545 254 VAVGFTTNADGEVKEV-KLKDGRTLEADIVVVGVGGRPLIS 293 (461)
Q Consensus 254 ~v~~i~~~~~g~~~~v-~~~~G~~i~aD~vi~a~G~~p~~~ 293 (461)
++.++ .+++.....+ ...++ ++.+|.+|+|+|.+|+..
T Consensus 83 ~v~~i-~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~~~~~ 121 (315)
T 3r9u_A 83 GVEQI-LKNSDGSFTIKLEGGK-TELAKAVIVCTGSAPKKA 121 (315)
T ss_dssp CEEEE-EECTTSCEEEEETTSC-EEEEEEEEECCCEEECCC
T ss_pred EEEEE-ecCCCCcEEEEEecCC-EEEeCEEEEeeCCCCCCC
Confidence 88888 5331122343 22334 899999999999877654
No 224
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.23 E-value=2.2e-06 Score=86.20 Aligned_cols=99 Identities=15% Similarity=0.214 Sum_probs=73.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
..+++|||||+.|+.+|..|++.|.+ |+|+|+.+... +... .. ....+.+.+++
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~l---~~~~---------~~-----------~~~~l~~~l~~ 222 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAE---VTLIEYMPEIL---PQGD---------PE-----------TAALLRRALEK 222 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSS---TTSC---------HH-----------HHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCe---EEEEEcCCccc---cccC---------HH-----------HHHHHHHHHHh
Confidence 47899999999999999999999876 99999986411 0000 00 01234566778
Q ss_pred cCcEEEcCCeEEEEeCCCCE--EEcC-C--Cc--EEecCEEEEccCCCcccc
Q 012545 85 KGIELILSTEIVRADIASKT--LLSA-T--GL--IFKYQILVIATGSTVSIT 129 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~--v~~~-~--~~--~~~~d~liiAtG~~~~~~ 129 (461)
.||+++.++.+.+++.+... +.+. + |+ ++++|.+++|+|.+|..+
T Consensus 223 ~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~ 274 (464)
T 2eq6_A 223 EGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTE 274 (464)
T ss_dssp TTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEESCT
T ss_pred cCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcccCCC
Confidence 99999999999999765543 4444 5 65 799999999999998643
No 225
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.22 E-value=2.6e-06 Score=84.43 Aligned_cols=98 Identities=15% Similarity=0.196 Sum_probs=75.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
..+++|||+|+.|+.+|..|++.|.+ |+++++.+... .+ . .+ ......+.+.+++
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~---Vtvv~~~~~~l-~~------~--------~~-------~~~~~~l~~~l~~ 206 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVN---VTLLEALPRVL-AR------V--------AG-------EALSEFYQAEHRA 206 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSTT-TT------T--------SC-------HHHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCe---EEEEecCCchh-hh------h--------cC-------HHHHHHHHHHHHh
Confidence 57899999999999999999999876 99999986421 00 0 00 0001234566778
Q ss_pred cCcEEEcCCeEEEEeCCCC---EEEcCCCcEEecCEEEEccCCCcc
Q 012545 85 KGIELILSTEIVRADIASK---TLLSATGLIFKYQILVIATGSTVS 127 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~---~v~~~~~~~~~~d~liiAtG~~~~ 127 (461)
.|++++.++.+.++..+.. .|.+.+|+++++|.+|+|+|..|.
T Consensus 207 ~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~ 252 (415)
T 3lxd_A 207 HGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPC 252 (415)
T ss_dssp TTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEES
T ss_pred CCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccC
Confidence 9999999999999986543 477888989999999999999884
No 226
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.22 E-value=2.4e-06 Score=85.67 Aligned_cols=101 Identities=12% Similarity=0.232 Sum_probs=74.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHC--CCcEEEEccCCccC--Cc----ccCH------HHHHHHHHHHHhcCcEEEcCCcEE
Q 012545 191 GKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWCM--PR----LFTA------DIAAFYEGYYANKGIKIIKGTVAV 256 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~--g~~Vtli~~~~~~~--~~----~~~~------~~~~~~~~~l~~~GV~v~~~~~v~ 256 (461)
++|+|||+|+.|+.+|..|++. |.+|+++++.+.+. +. .... ++.....+.+++.|++++.+++|+
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~ 82 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREVV 82 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECSCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 5799999999999999999998 89999999987643 11 0111 111113567788999999999999
Q ss_pred EEEecCCCCEEEEE-eCCCcEEecCEEEEccCCCCChh
Q 012545 257 GFTTNADGEVKEVK-LKDGRTLEADIVVVGVGGRPLIS 293 (461)
Q Consensus 257 ~i~~~~~g~~~~v~-~~~G~~i~aD~vi~a~G~~p~~~ 293 (461)
+++. +.+...+. ..+++++.+|.+|+|+|.+|...
T Consensus 83 ~id~--~~~~v~v~~~~~~~~~~~d~lviAtG~~p~~p 118 (452)
T 3oc4_A 83 AMDV--ENQLIAWTRKEEQQWYSYDKLILATGASQFST 118 (452)
T ss_dssp EEET--TTTEEEEEETTEEEEEECSEEEECCCCCBCCC
T ss_pred EEEC--CCCEEEEEecCceEEEEcCEEEECCCcccCCC
Confidence 9986 33333443 23556899999999999988654
No 227
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.22 E-value=6.9e-06 Score=77.78 Aligned_cols=98 Identities=12% Similarity=0.097 Sum_probs=75.2
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEccCCcc---C----------------C-cccCHHHHHHHHHHHHhcCcEEEc
Q 012545 192 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC---M----------------P-RLFTADIAAFYEGYYANKGIKIIK 251 (461)
Q Consensus 192 ~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~---~----------------~-~~~~~~~~~~~~~~l~~~GV~v~~ 251 (461)
.|+|||+|+.|+.+|..++++|.+|+++++.+.. + + ....+++.+.+.+.+++.++++..
T Consensus 6 DvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~~~~ 85 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTIIT 85 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEEC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcEEEE
Confidence 5899999999999999999999999999875420 0 0 012356778888889999999876
Q ss_pred CCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCCh
Q 012545 252 GTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 292 (461)
Q Consensus 252 ~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~ 292 (461)
. .+..... +.....+.+.++.++.+|.+|+|||.+|..
T Consensus 86 ~-~v~~~~~--~~~~~~~~~~~~~~~~~~~liiATG~~~~~ 123 (314)
T 4a5l_A 86 E-TIDHVDF--STQPFKLFTEEGKEVLTKSVIIATGATAKR 123 (314)
T ss_dssp C-CEEEEEC--SSSSEEEEETTCCEEEEEEEEECCCEEECC
T ss_pred e-EEEEeec--CCCceEEEECCCeEEEEeEEEEcccccccc
Confidence 5 4555554 223346778888999999999999977654
No 228
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.22 E-value=1.3e-05 Score=82.35 Aligned_cols=100 Identities=19% Similarity=0.136 Sum_probs=77.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCc-cC-----------------------Ccc-----------------
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW-CM-----------------------PRL----------------- 229 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~-~~-----------------------~~~----------------- 229 (461)
-.|+|||+|..|+++|..+++.|.+|.++++.+. +. ...
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~~ 107 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLNT 107 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeeccc
Confidence 4799999999999999999999999999998631 10 000
Q ss_pred ------------cC-HHHHHHHHHHHHh-cCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCCh
Q 012545 230 ------------FT-ADIAAFYEGYYAN-KGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 292 (461)
Q Consensus 230 ------------~~-~~~~~~~~~~l~~-~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~ 292 (461)
.+ ..+.+.+.+.+++ .|++++ +.+|+++.. +++.+.+|.+.+|.++.||.||+|+|..++.
T Consensus 108 ~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~-e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~ 182 (637)
T 2zxi_A 108 RKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIV-KNNQVVGVRTNLGVEYKTKAVVVTTGTFLNG 182 (637)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEE-SSSBEEEEEETTSCEEECSEEEECCTTCBTC
T ss_pred ccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEe-cCCEEEEEEECCCcEEEeCEEEEccCCCccC
Confidence 00 1345566677777 599995 679999986 4667778999999999999999999976543
No 229
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.22 E-value=2.5e-06 Score=85.81 Aligned_cols=98 Identities=17% Similarity=0.198 Sum_probs=75.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
..+++|||+|+.|+.+|..|++.|.+ |+++++.+... +.+. .. ....+.+.+++
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~---Vtlv~~~~~~l---~~~~---------~~-----------~~~~l~~~l~~ 219 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSE---VTVVALEDRLL---FQFD---------PL-----------LSATLAENMHA 219 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSS---TTSC---------HH-----------HHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCE---EEEEEcCCccc---cccC---------HH-----------HHHHHHHHHHH
Confidence 46899999999999999999999876 99999885311 0000 00 01234566788
Q ss_pred cCcEEEcCCeEEEEeCCC--CEEEcCCCc-EEecCEEEEccCCCccc
Q 012545 85 KGIELILSTEIVRADIAS--KTLLSATGL-IFKYQILVIATGSTVSI 128 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~--~~v~~~~~~-~~~~d~liiAtG~~~~~ 128 (461)
.|++++.++.+.+++.+. ..+.+.+|+ ++.+|.+++|+|.+|..
T Consensus 220 ~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 266 (463)
T 2r9z_A 220 QGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNT 266 (463)
T ss_dssp TTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEEESC
T ss_pred CCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCCcCC
Confidence 999999999999997543 356777888 89999999999999854
No 230
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.20 E-value=1.1e-05 Score=82.86 Aligned_cols=98 Identities=17% Similarity=0.169 Sum_probs=76.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccC--------Cc------------cc----------------CHHH
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM--------PR------------LF----------------TADI 234 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~--------~~------------~~----------------~~~~ 234 (461)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. +. .+ .+++
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~i 96 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPEI 96 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHHH
Confidence 479999999999999999999999999999875421 00 01 1344
Q ss_pred HHHHHHHHHhcC--cEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCC
Q 012545 235 AAFYEGYYANKG--IKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGG 288 (461)
Q Consensus 235 ~~~~~~~l~~~G--V~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~ 288 (461)
.+++....++.+ ++++++++|++++.++++....|++++|+++.+|.||+|+|.
T Consensus 97 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~ 152 (542)
T 1w4x_A 97 LRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQ 152 (542)
T ss_dssp HHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCS
T ss_pred HHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCC
Confidence 556666666665 678999999999875544456788899989999999999995
No 231
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.20 E-value=7.2e-06 Score=80.46 Aligned_cols=101 Identities=16% Similarity=0.153 Sum_probs=77.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCcc------CCcc-----------------------------------
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC------MPRL----------------------------------- 229 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~------~~~~----------------------------------- 229 (461)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.. ....
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 82 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQ 82 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETTE
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECCc
Confidence 36999999999999999999999999999987631 0000
Q ss_pred ------------------cCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEe-CCCc--EEecCEEEEccCC
Q 012545 230 ------------------FTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKL-KDGR--TLEADIVVVGVGG 288 (461)
Q Consensus 230 ------------------~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~-~~G~--~i~aD~vi~a~G~ 288 (461)
-...+.+.+.+.+.+.|++++++++|++++.++++. ..|++ .+|+ ++.+|.||.|.|.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~-~~v~~~~~g~~~~~~a~~vV~AdG~ 161 (394)
T 1k0i_A 83 RRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGER-PYVTFERDGERLRLDCDYIAGCDGF 161 (394)
T ss_dssp EEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSS-CEEEEEETTEEEEEECSEEEECCCT
T ss_pred eEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCc-eEEEEecCCcEEEEEeCEEEECCCC
Confidence 012345566677777899999999999998743333 35666 6887 7999999999998
Q ss_pred CCCh
Q 012545 289 RPLI 292 (461)
Q Consensus 289 ~p~~ 292 (461)
....
T Consensus 162 ~S~v 165 (394)
T 1k0i_A 162 HGIS 165 (394)
T ss_dssp TCST
T ss_pred CcHH
Confidence 7664
No 232
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.20 E-value=8e-06 Score=79.66 Aligned_cols=56 Identities=20% Similarity=0.140 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCC
Q 012545 233 DIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPL 291 (461)
Q Consensus 233 ~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~ 291 (461)
.+.+.+.+.+++.|++++.+++|+++..+ ++.+ .|++.+| ++.+|.||+|+|....
T Consensus 165 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~-~v~~~~g-~~~a~~vV~A~G~~s~ 220 (382)
T 1ryi_A 165 FVCKAYVKAAKMLGAEIFEHTPVLHVERD-GEAL-FIKTPSG-DVWANHVVVASGVWSG 220 (382)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCCCEEECS-SSSE-EEEETTE-EEEEEEEEECCGGGTH
T ss_pred HHHHHHHHHHHHCCCEEEcCCcEEEEEEE-CCEE-EEEcCCc-eEEcCEEEECCChhHH
Confidence 45666778888899999999999999873 4444 7788877 8999999999997643
No 233
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.20 E-value=3.9e-06 Score=84.00 Aligned_cols=100 Identities=20% Similarity=0.363 Sum_probs=71.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCcEEEEccCCccCC------ccc-----CHHHHHHHHHHH-HhcCcEEEcCCcE
Q 012545 190 NGKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWCMP------RLF-----TADIAAFYEGYY-ANKGIKIIKGTVA 255 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~--g~~Vtli~~~~~~~~------~~~-----~~~~~~~~~~~l-~~~GV~v~~~~~v 255 (461)
.++|+|||+|+.|+.+|..|++. +.+|+++++.+.+.. ..+ ..++.....+.+ ++.|++++.+++|
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~v 82 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNAEV 82 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTTCEEETTCEE
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEecCEE
Confidence 46899999999999999999998 789999999875321 100 111122222333 6889999999999
Q ss_pred EEEEecCCCCEEEEEeCCC-cEEecCEEEEccCCCCChh
Q 012545 256 VGFTTNADGEVKEVKLKDG-RTLEADIVVVGVGGRPLIS 293 (461)
Q Consensus 256 ~~i~~~~~g~~~~v~~~~G-~~i~aD~vi~a~G~~p~~~ 293 (461)
++++. +. ..+.+.+| .++.+|.+|+|+|.+|...
T Consensus 83 ~~i~~--~~--~~v~~~~g~~~~~~d~lviAtG~~p~~p 117 (449)
T 3kd9_A 83 IEVDT--GY--VRVRENGGEKSYEWDYLVFANGASPQVP 117 (449)
T ss_dssp EEECS--SE--EEEECSSSEEEEECSEEEECCCEEECCC
T ss_pred EEEec--CC--CEEEECCceEEEEcCEEEECCCCCCCCC
Confidence 99864 22 45677777 4899999999999877643
No 234
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.19 E-value=2.4e-06 Score=85.80 Aligned_cols=98 Identities=14% Similarity=0.230 Sum_probs=72.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
.++++|||+|+.|+.+|..|++.|.+ |+|+++.+... +... .. ......+.+++
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~l---~~~~---------~~-----------~~~~l~~~l~~ 223 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTK---VTILEGAGEIL---SGFE---------KQ-----------MAAIIKKRLKK 223 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSSS---TTSC---------HH-----------HHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCc---EEEEEcCCccc---cccC---------HH-----------HHHHHHHHHHH
Confidence 57999999999999999999999876 99999985311 0000 00 01234566778
Q ss_pred cCcEEEcCCeEEEEeCCCCE--EEcC---CCcEEecCEEEEccCCCccc
Q 012545 85 KGIELILSTEIVRADIASKT--LLSA---TGLIFKYQILVIATGSTVSI 128 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~--v~~~---~~~~~~~d~liiAtG~~~~~ 128 (461)
.|++++.++.+.+++.+... +.+. +++++++|.+++|+|.+|..
T Consensus 224 ~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~ 272 (455)
T 1ebd_A 224 KGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPNT 272 (455)
T ss_dssp TTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEESC
T ss_pred CCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCccc
Confidence 99999999999999765533 3332 45679999999999999854
No 235
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.18 E-value=1.8e-05 Score=81.66 Aligned_cols=115 Identities=24% Similarity=0.281 Sum_probs=83.4
Q ss_pred HHHHHHHHHHhc--CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcc-------------------------
Q 012545 177 DADKLVEAIKAK--KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRL------------------------- 229 (461)
Q Consensus 177 ~~~~l~~~l~~~--~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~------------------------- 229 (461)
+...+...+... ....|+|||+|..|+.+|..+++.|.+|+++++.+.+....
T Consensus 111 ~~~~~~~~~~~~~~~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~ 190 (572)
T 1d4d_A 111 DKAAQDKAIAAGVKETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQ 190 (572)
T ss_dssp SHHHHHHHHHSCCCEECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTH
T ss_pred cHHHHHHHhhccCCCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHH
Confidence 344444444421 24579999999999999999999999999999876432100
Q ss_pred --------------------------------------------------------------cCHHHHHHHHHHHHhcCc
Q 012545 230 --------------------------------------------------------------FTADIAAFYEGYYANKGI 247 (461)
Q Consensus 230 --------------------------------------------------------------~~~~~~~~~~~~l~~~GV 247 (461)
....+.+.+.+.+++.||
T Consensus 191 ~~~~~~~~~g~~~~~~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv 270 (572)
T 1d4d_A 191 IMIDDTMKGGRNINDPELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGT 270 (572)
T ss_dssp HHHHHHHHHTTTCSCHHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCC
Confidence 012344566777788999
Q ss_pred EEEcCCcEEEEEecCCCCEEEEEeC--CCc--EEecCEEEEccCCCCC
Q 012545 248 KIIKGTVAVGFTTNADGEVKEVKLK--DGR--TLEADIVVVGVGGRPL 291 (461)
Q Consensus 248 ~v~~~~~v~~i~~~~~g~~~~v~~~--~G~--~i~aD~vi~a~G~~p~ 291 (461)
+++++++|+++..++++++.+|.+. +|+ ++.+|.||+|+|..++
T Consensus 271 ~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 271 DIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp EEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred eEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCcc
Confidence 9999999999987333777777665 674 6899999999996553
No 236
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.17 E-value=3.3e-06 Score=84.83 Aligned_cols=102 Identities=17% Similarity=0.170 Sum_probs=76.9
Q ss_pred cEEEECCCHHHHHHHHHHHHCC-----CcEEEEccCCccCC-------c-------------------------------
Q 012545 192 KAVVVGGGYIGLELSAALKINN-----IDVSMVYPEPWCMP-------R------------------------------- 228 (461)
Q Consensus 192 ~v~VvG~G~~g~e~a~~l~~~g-----~~Vtli~~~~~~~~-------~------------------------------- 228 (461)
.|+|||+|+.|+.+|..|++.| .+|+++++.+.+.- .
T Consensus 32 dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~~~~ 111 (463)
T 3s5w_A 32 DLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLHKHD 111 (463)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHHHTT
T ss_pred CEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhhhcC
Confidence 7999999999999999999999 99999998873210 0
Q ss_pred ----------c--cCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCC-CCE--EEEEeCCCc----EEecCEEEEccCCC
Q 012545 229 ----------L--FTADIAAFYEGYYANKGIKIIKGTVAVGFTTNAD-GEV--KEVKLKDGR----TLEADIVVVGVGGR 289 (461)
Q Consensus 229 ----------~--~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~-g~~--~~v~~~~G~----~i~aD~vi~a~G~~ 289 (461)
. ...++.+.+....++.+++++++++|++++..++ +.. ..|++.+|+ ++.+|.||+|+|..
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~~ 191 (463)
T 3s5w_A 112 RLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGGT 191 (463)
T ss_dssp CHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCCE
T ss_pred ceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCCC
Confidence 0 0134445566666777899999999999986321 332 356777765 89999999999987
Q ss_pred CChh
Q 012545 290 PLIS 293 (461)
Q Consensus 290 p~~~ 293 (461)
|..+
T Consensus 192 p~~p 195 (463)
T 3s5w_A 192 PRIP 195 (463)
T ss_dssp ECCC
T ss_pred CCCc
Confidence 7644
No 237
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.17 E-value=1.4e-06 Score=84.52 Aligned_cols=39 Identities=26% Similarity=0.399 Sum_probs=35.7
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 012545 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (461)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~ 42 (461)
||++.+||+|||||++|+++|++|+++|.+ |+|+|++..
T Consensus 2 ~m~~~~dVvVIG~Gi~Gls~A~~La~~G~~---V~vle~~~~ 40 (363)
T 1c0p_A 2 MMHSQKRVVVLGSGVIGLSSALILARKGYS---VHILARDLP 40 (363)
T ss_dssp CCCCSCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSCT
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHhCCCE---EEEEeccCC
Confidence 777789999999999999999999999986 999999863
No 238
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.17 E-value=8.3e-06 Score=81.29 Aligned_cols=95 Identities=14% Similarity=0.202 Sum_probs=75.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
..+++|||||+.|+.+|..+++.|.+ |+|+++.+...- . .... ......+.+++
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~ll~-----------~-~d~~-----------~~~~~~~~l~~ 200 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLH---PTLIHRSDKINK-----------L-MDAD-----------MNQPILDELDK 200 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCE---EEEEESSSCCST-----------T-SCGG-----------GGHHHHHHHHH
T ss_pred CcEEEEECCccchhhhHHHHHhcCCc---ceeeeeeccccc-----------c-ccch-----------hHHHHHHHhhc
Confidence 46899999999999999999999976 999999864210 0 0000 01345677888
Q ss_pred cCcEEEcCCeEEEEeCCCCEEEcCCCcEEecCEEEEccCCCcc
Q 012545 85 KGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVS 127 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~liiAtG~~~~ 127 (461)
.||+++.++.+.+++ ...+.+.+++++++|.+++|+|.+|+
T Consensus 201 ~gV~i~~~~~v~~~~--~~~v~~~~g~~~~~D~vl~a~G~~Pn 241 (437)
T 4eqs_A 201 REIPYRLNEEINAIN--GNEITFKSGKVEHYDMIIEGVGTHPN 241 (437)
T ss_dssp TTCCEEESCCEEEEE--TTEEEETTSCEEECSEEEECCCEEES
T ss_pred cceEEEeccEEEEec--CCeeeecCCeEEeeeeEEEEeceecC
Confidence 999999999998876 45688899999999999999999884
No 239
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.16 E-value=5.6e-06 Score=78.40 Aligned_cols=36 Identities=31% Similarity=0.357 Sum_probs=32.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHc--CCCCCcEEEEeCCCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQ--GVKPGELAIISKEAVA 43 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~--g~~~~~V~vie~~~~~ 43 (461)
.+||+|||||++|++||..|++. |++ |+|+|+.+..
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~---V~v~e~~~~~ 102 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLK---VCIIESSVAP 102 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSC---EEEECSSSSC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCe---EEEEecCccc
Confidence 46999999999999999999998 776 9999998653
No 240
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.16 E-value=4.5e-06 Score=84.32 Aligned_cols=98 Identities=15% Similarity=0.191 Sum_probs=75.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
..+++|||||+.|+.+|..|++.|.+ |+++++.+... +.+. .. ......+.+++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~~l---~~~d---------~~-----------~~~~l~~~l~~ 238 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSE---THLVIRGETVL---RKFD---------EC-----------IQNTITDHYVK 238 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCE---EEEECSSSSSC---TTSC---------HH-----------HHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCc---eEEEEeCCccc---cccC---------HH-----------HHHHHHHHHHh
Confidence 47899999999999999999999876 99999986411 0000 00 01234566778
Q ss_pred cCcEEEcCCeEEEEeCCC----CEEEcCCC-cEEecCEEEEccCCCccc
Q 012545 85 KGIELILSTEIVRADIAS----KTLLSATG-LIFKYQILVIATGSTVSI 128 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~----~~v~~~~~-~~~~~d~liiAtG~~~~~ 128 (461)
.||+++.++.+.+++.+. ..+.+.+| +++.+|.+|+|+|.+|+.
T Consensus 239 ~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 239 EGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp HTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECC
T ss_pred CCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCcc
Confidence 899999999999997542 25777788 789999999999998853
No 241
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.15 E-value=4.3e-06 Score=86.74 Aligned_cols=103 Identities=17% Similarity=0.192 Sum_probs=76.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHC--CCcEEEEccCCccCC----------cc-c--CHHHHHHHHHHHHhcCcEEEcCC
Q 012545 189 KNGKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWCMP----------RL-F--TADIAAFYEGYYANKGIKIIKGT 253 (461)
Q Consensus 189 ~~~~v~VvG~G~~g~e~a~~l~~~--g~~Vtli~~~~~~~~----------~~-~--~~~~~~~~~~~l~~~GV~v~~~~ 253 (461)
..++|+|||+|+.|+.+|..|++. |.+|+++++.+.+.- .. . ...+...+....++.|+++++++
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~~~~ 114 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRVLS 114 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEECSE
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEEECC
Confidence 457899999999999999999998 899999999876321 00 0 11123345566678899999999
Q ss_pred cEEEEEecCCCCEEEEEe-CCCc--EEecCEEEEccCCCCChh
Q 012545 254 VAVGFTTNADGEVKEVKL-KDGR--TLEADIVVVGVGGRPLIS 293 (461)
Q Consensus 254 ~v~~i~~~~~g~~~~v~~-~~G~--~i~aD~vi~a~G~~p~~~ 293 (461)
+|+++.. ++....+.. .+|+ ++.+|.+|+|+|.+|...
T Consensus 115 ~V~~id~--~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p 155 (588)
T 3ics_A 115 EVVKINK--EEKTITIKNVTTNETYNEAYDVLILSPGAKPIVP 155 (588)
T ss_dssp EEEEEET--TTTEEEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEEEEC--CCCEEEEeecCCCCEEEEeCCEEEECCCCCCCCC
Confidence 9999986 333334443 4565 789999999999877643
No 242
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.14 E-value=5.8e-06 Score=83.97 Aligned_cols=98 Identities=16% Similarity=0.189 Sum_probs=75.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
..+++|||+|+.|+.+|..|++.|.+ |+++++.+... +... .. ......+.+++
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~~l---~~~d---------~~-----------~~~~l~~~l~~ 229 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGID---SYIFARGNRIL---RKFD---------ES-----------VINVLENDMKK 229 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCE---EEEECSSSSSC---TTSC---------HH-----------HHHHHHHHHHH
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCe---EEEEecCCccC---cccc---------hh-----------hHHHHHHHHHh
Confidence 46899999999999999999998876 99999985411 0000 00 01234567788
Q ss_pred cCcEEEcCCeEEEEeCCC---CEEEcCCCcE-EecCEEEEccCCCccc
Q 012545 85 KGIELILSTEIVRADIAS---KTLLSATGLI-FKYQILVIATGSTVSI 128 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~---~~v~~~~~~~-~~~d~liiAtG~~~~~ 128 (461)
.||+++.++.+.+++.+. ..+.+.+|++ +++|.+++|+|.+|..
T Consensus 230 ~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 230 NNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp TTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTT
T ss_pred CCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCC
Confidence 999999999999997543 2577778887 9999999999999854
No 243
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.14 E-value=3.1e-06 Score=88.42 Aligned_cols=35 Identities=26% Similarity=0.420 Sum_probs=32.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHHc------CCCCCcEEEEeCCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQ------GVKPGELAIISKEAV 42 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~------g~~~~~V~vie~~~~ 42 (461)
.+||||||||+||++||++|++. |.+ |+|+||...
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~---V~vleK~~~ 62 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAK---ILLVDKASL 62 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCC---EEEECSSCT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCc---EEEEEecCC
Confidence 58999999999999999999997 877 999999754
No 244
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.13 E-value=1.1e-05 Score=80.75 Aligned_cols=101 Identities=21% Similarity=0.262 Sum_probs=78.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCC------c------------------------------------
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP------R------------------------------------ 228 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~------~------------------------------------ 228 (461)
-+|+|||+|+.|+.+|..|++.|.+|+++++.+.... .
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQT 86 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCce
Confidence 4799999999999999999999999999998764210 0
Q ss_pred ---------cc-CHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeC---CCc--EEecCEEEEccCCCCCh
Q 012545 229 ---------LF-TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK---DGR--TLEADIVVVGVGGRPLI 292 (461)
Q Consensus 229 ---------~~-~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~---~G~--~i~aD~vi~a~G~~p~~ 292 (461)
.+ ...+.+.+.+.+++.|++++.+++|+++.. +++.+.+|++. +|+ ++.||.||.|.|.....
T Consensus 87 ~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~-~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~v 164 (453)
T 3atr_A 87 VWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIF-EDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSF 164 (453)
T ss_dssp EEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEE-ETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTT
T ss_pred EEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEE-ECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhh
Confidence 00 024566777778889999999999999987 34555445554 676 79999999999976654
No 245
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.13 E-value=2.8e-05 Score=80.40 Aligned_cols=102 Identities=22% Similarity=0.335 Sum_probs=80.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHC------CCcEEEEccCCccCCc------------------------------------
Q 012545 191 GKAVVVGGGYIGLELSAALKIN------NIDVSMVYPEPWCMPR------------------------------------ 228 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~------g~~Vtli~~~~~~~~~------------------------------------ 228 (461)
-.|+|||+|+.|+-+|..|++. |.+|+++++.+.+...
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~~ 115 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRFG 115 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhee
Confidence 4799999999999999999998 9999999986432100
Q ss_pred --------cc---C--------------HHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeC------CC---
Q 012545 229 --------LF---T--------------ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK------DG--- 274 (461)
Q Consensus 229 --------~~---~--------------~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~------~G--- 274 (461)
.+ + ..+.+.+.+.+++.||+++++++++++..++++.+.+|++. +|
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~ 195 (584)
T 2gmh_A 116 ILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPK 195 (584)
T ss_dssp EECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEE
T ss_pred eeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcc
Confidence 00 0 14566778888889999999999999988556777778776 33
Q ss_pred ------cEEecCEEEEccCCCCCh
Q 012545 275 ------RTLEADIVVVGVGGRPLI 292 (461)
Q Consensus 275 ------~~i~aD~vi~a~G~~p~~ 292 (461)
.++.+|.||.|.|.....
T Consensus 196 ~~~~~g~~i~Ad~VV~AdG~~S~v 219 (584)
T 2gmh_A 196 TTFERGLELHAKVTIFAEGCHGHL 219 (584)
T ss_dssp EEEECCCEEECSEEEECCCTTCHH
T ss_pred cccCCceEEECCEEEEeeCCCchH
Confidence 689999999999988754
No 246
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.13 E-value=5.9e-06 Score=83.69 Aligned_cols=98 Identities=14% Similarity=0.222 Sum_probs=75.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHc---CCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQ---GVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEW 81 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~---g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (461)
..+++|||+|+.|+.+|..|++. |.+ |+++++.+... +.+. .. ....+.+.
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~---Vtlv~~~~~~l---~~~d---------~~-----------~~~~l~~~ 240 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQ---VDLAYRGDMIL---RGFD---------SE-----------LRKQLTEQ 240 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCE---EEEEESSSSSS---TTSC---------HH-----------HHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCe---EEEEEcCCCcc---cccC---------HH-----------HHHHHHHH
Confidence 46899999999999999999998 765 99999986411 0000 00 01234566
Q ss_pred HHHcCcEEEcCCeEEEEeCCC---CEEEcCCCcEEecCEEEEccCCCccc
Q 012545 82 YKEKGIELILSTEIVRADIAS---KTLLSATGLIFKYQILVIATGSTVSI 128 (461)
Q Consensus 82 ~~~~~v~~~~~~~v~~i~~~~---~~v~~~~~~~~~~d~liiAtG~~~~~ 128 (461)
+++.|++++.++.+.+++.+. ..+.+.+|+++.+|.+|+|+|.+|..
T Consensus 241 l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 290 (490)
T 1fec_A 241 LRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRS 290 (490)
T ss_dssp HHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred HHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCc
Confidence 788999999999999998653 25777788889999999999998854
No 247
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.13 E-value=7.1e-06 Score=78.90 Aligned_cols=94 Identities=16% Similarity=0.205 Sum_probs=69.6
Q ss_pred cEEEECCCHHHHHHHHHHHH---CCCcEEEEccCCccCCc-------------------cc---CH---HH---------
Q 012545 192 KAVVVGGGYIGLELSAALKI---NNIDVSMVYPEPWCMPR-------------------LF---TA---DI--------- 234 (461)
Q Consensus 192 ~v~VvG~G~~g~e~a~~l~~---~g~~Vtli~~~~~~~~~-------------------~~---~~---~~--------- 234 (461)
+|+|||+|..|+-+|..|++ .|.+|+++++.+.+..+ .+ +. .+
T Consensus 3 dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~ 82 (342)
T 3qj4_A 3 QVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELLA 82 (342)
T ss_dssp EEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHHH
T ss_pred cEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHHh
Confidence 69999999999999999999 89999999987432110 00 00 11
Q ss_pred -----------------------------HHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEc
Q 012545 235 -----------------------------AAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVG 285 (461)
Q Consensus 235 -----------------------------~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a 285 (461)
...+....++.|++++++++|++++.++++ ..|++.+|+++.+|.||+|
T Consensus 83 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~--~~v~~~~g~~~~ad~vV~A 160 (342)
T 3qj4_A 83 YGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDK--WEVSKQTGSPEQFDLIVLT 160 (342)
T ss_dssp TTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSS--EEEEESSSCCEEESEEEEC
T ss_pred CCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCE--EEEEECCCCEEEcCEEEEC
Confidence 112223334448999999999999984444 4688889988999999999
Q ss_pred cC
Q 012545 286 VG 287 (461)
Q Consensus 286 ~G 287 (461)
+.
T Consensus 161 ~p 162 (342)
T 3qj4_A 161 MP 162 (342)
T ss_dssp SC
T ss_pred CC
Confidence 87
No 248
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.13 E-value=6.2e-06 Score=83.63 Aligned_cols=98 Identities=14% Similarity=0.241 Sum_probs=75.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHc---CCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQ---GVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEW 81 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~---g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (461)
..+++|||+|+.|+.+|..|++. |.+ |+++++.+... +.+. .. ....+.+.
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~---Vtlv~~~~~~l---~~~d---------~~-----------~~~~l~~~ 244 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGK---VTLCYRNNLIL---RGFD---------ET-----------IREEVTKQ 244 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCE---EEEEESSSSSC---TTSC---------HH-----------HHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCe---EEEEEcCCccc---cccC---------HH-----------HHHHHHHH
Confidence 46899999999999999999998 765 99999986411 0000 00 01234567
Q ss_pred HHHcCcEEEcCCeEEEEeCCC---CEEEcCCCcEEecCEEEEccCCCccc
Q 012545 82 YKEKGIELILSTEIVRADIAS---KTLLSATGLIFKYQILVIATGSTVSI 128 (461)
Q Consensus 82 ~~~~~v~~~~~~~v~~i~~~~---~~v~~~~~~~~~~d~liiAtG~~~~~ 128 (461)
+++.||+++.++.+.+++.+. ..+.+.+|+++++|.+|+|+|.+|+.
T Consensus 245 l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 245 LTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRT 294 (495)
T ss_dssp HHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECC
T ss_pred HHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcccc
Confidence 788999999999999997653 35777888889999999999998854
No 249
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.12 E-value=1.4e-05 Score=78.22 Aligned_cols=100 Identities=18% Similarity=0.226 Sum_probs=77.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCC--------------------c----------------------
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP--------------------R---------------------- 228 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~--------------------~---------------------- 228 (461)
..|+|||+|+.|+-+|..|++.|.+|+++++.+.+.. .
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRPI 84 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCEEE
Confidence 3699999999999999999999999999998763210 0
Q ss_pred ccC--------------HHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEe---CCCcEEecCEEEEccCCCCC
Q 012545 229 LFT--------------ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKL---KDGRTLEADIVVVGVGGRPL 291 (461)
Q Consensus 229 ~~~--------------~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~---~~G~~i~aD~vi~a~G~~p~ 291 (461)
.++ ..+.+.+.+.+++.|++++.+++|+++..+ ++.+.+|++ .++.++.+|.||.|.|....
T Consensus 85 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s~ 163 (397)
T 3cgv_A 85 ILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAADGFESE 163 (397)
T ss_dssp EEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECCCTTCH
T ss_pred EEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEe-CCEEEEEEEEECCeEEEEEcCEEEECCCcchH
Confidence 000 124466777788889999999999999873 555555666 35568999999999998763
No 250
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.12 E-value=2.3e-05 Score=80.95 Aligned_cols=101 Identities=19% Similarity=0.245 Sum_probs=79.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCc-----------------------------------------
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR----------------------------------------- 228 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~----------------------------------------- 228 (461)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+.....
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 102 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQDQ 102 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecCCC
Confidence 468999999999999999999999999999987321000
Q ss_pred ---------------------cc-CHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeC-CC--cEEecCEEE
Q 012545 229 ---------------------LF-TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK-DG--RTLEADIVV 283 (461)
Q Consensus 229 ---------------------~~-~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~-~G--~~i~aD~vi 283 (461)
.+ ...+.+.+.+.+++.|++++.+++|+++..+ ++....|++. +| .++.||.||
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~-~g~~~~V~~~~~G~~~~i~AdlVV 181 (591)
T 3i3l_A 103 APWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLS-DPDRVVLTVRRGGESVTVESDFVI 181 (591)
T ss_dssp CCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECC-STTCEEEEEEETTEEEEEEESEEE
T ss_pred ccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCCEEEEEEecCCceEEEEcCEEE
Confidence 00 1345667778888899999999999999863 4555677776 67 579999999
Q ss_pred EccCCCCC
Q 012545 284 VGVGGRPL 291 (461)
Q Consensus 284 ~a~G~~p~ 291 (461)
.|+|....
T Consensus 182 ~AdG~~S~ 189 (591)
T 3i3l_A 182 DAGGSGGP 189 (591)
T ss_dssp ECCGGGCH
T ss_pred ECCCCcch
Confidence 99998653
No 251
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.11 E-value=5e-06 Score=83.96 Aligned_cols=98 Identities=16% Similarity=0.341 Sum_probs=73.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
..+++|||||+.|+.+|..|++.|.+ |+++++.+... +... . .....+.+.+++
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~l---~~~~---------~-----------~~~~~l~~~l~~ 236 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSK---VTVVEFQPQIG---ASMD---------G-----------EVAKATQKFLKK 236 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSS---SSSC---------H-----------HHHHHHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCE---EEEEEeCCccc---cccC---------H-----------HHHHHHHHHHHH
Confidence 47899999999999999999999876 99999986411 0000 0 001234566788
Q ss_pred cCcEEEcCCeEEEEeC--CCC--EEEcC-----CCcEEecCEEEEccCCCccc
Q 012545 85 KGIELILSTEIVRADI--ASK--TLLSA-----TGLIFKYQILVIATGSTVSI 128 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~--~~~--~v~~~-----~~~~~~~d~liiAtG~~~~~ 128 (461)
.||+++.++.+.+++. +.+ .+.+. +++++++|.+|+|+|.+|..
T Consensus 237 ~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~ 289 (478)
T 1v59_A 237 QGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYI 289 (478)
T ss_dssp TTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECC
T ss_pred CCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCC
Confidence 9999999999999986 443 34443 34679999999999998854
No 252
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.10 E-value=7e-06 Score=82.75 Aligned_cols=102 Identities=20% Similarity=0.258 Sum_probs=64.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCcEEEEccCCcc------CCcccC------HHH-------HHHHHHHHHhcCcE
Q 012545 190 NGKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWC------MPRLFT------ADI-------AAFYEGYYANKGIK 248 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~--g~~Vtli~~~~~~------~~~~~~------~~~-------~~~~~~~l~~~GV~ 248 (461)
.++|+|||+|+.|+.+|..|++. |.+|+++++.+.+ ++..+. .++ ........++.|++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 82 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVE 82 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcE
Confidence 36899999999999999999998 8999999998763 111111 111 12222333358999
Q ss_pred EEcCCcEEEEEecCCCCEEEEEe-CCCc--EEecCEEEEccCCCCChh
Q 012545 249 IIKGTVAVGFTTNADGEVKEVKL-KDGR--TLEADIVVVGVGGRPLIS 293 (461)
Q Consensus 249 v~~~~~v~~i~~~~~g~~~~v~~-~~G~--~i~aD~vi~a~G~~p~~~ 293 (461)
++.+++|++++. ++....+.. .+|+ ++.+|.+|+|+|.+|...
T Consensus 83 ~~~~~~V~~id~--~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p 128 (472)
T 3iwa_A 83 ALVETRAHAIDR--AAHTVEIENLRTGERRTLKYDKLVLALGSKANRP 128 (472)
T ss_dssp EECSEEEEEEET--TTTEEEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEECCEEEEEEC--CCCEEEEeecCCCCEEEEECCEEEEeCCCCcCCC
Confidence 999999999986 443334443 3465 799999999999877543
No 253
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.10 E-value=9.9e-06 Score=82.65 Aligned_cols=98 Identities=11% Similarity=0.051 Sum_probs=75.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
..+++|||||+.|+..|..+++.|.+ |+|+++....+... .. ........+++
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~---VTii~~~~~L~~~D-------------~e-----------i~~~l~~~l~~ 275 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYD---VTVAVRSIVLRGFD-------------QQ-----------CAVKVKLYMEE 275 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCC---EEEEESSCSSTTSC-------------HH-----------HHHHHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCe---EEEecccccccccc-------------hh-----------HHHHHHHHHHh
Confidence 57899999999999999999999987 99998764321100 00 01235667888
Q ss_pred cCcEEEcCCeEEEEeCCCCE--EEcCCCcEEecCEEEEccCCCcccc
Q 012545 85 KGIELILSTEIVRADIASKT--LLSATGLIFKYQILVIATGSTVSIT 129 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~--v~~~~~~~~~~d~liiAtG~~~~~~ 129 (461)
.|++++.+..+..+...... +.+.++.++.+|.+++|+|.+|+..
T Consensus 276 ~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~ 322 (542)
T 4b1b_A 276 QGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGDID 322 (542)
T ss_dssp TTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEESCG
T ss_pred hcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccCCcc
Confidence 99999999999888765554 5567778899999999999998643
No 254
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.10 E-value=6.7e-06 Score=83.98 Aligned_cols=97 Identities=14% Similarity=0.223 Sum_probs=74.2
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHHc
Q 012545 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 85 (461)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (461)
.+++|||+|..|+.+|..|++.|.+ |+++++.+... . ... .. ....+.+.+++.
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~---Vtlv~~~~~~l-~--~~~---------~~-----------~~~~l~~~l~~~ 268 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRR---TVMLVRTEPLK-L--IKD---------NE-----------TRAYVLDRMKEQ 268 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSCTTT-T--CCS---------HH-----------HHHHHHHHHHHT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCe---EEEEEecCccc-c--ccc---------HH-----------HHHHHHHHHHhC
Confidence 7899999999999999999999876 99999986411 0 000 00 012345677889
Q ss_pred CcEEEcCCeEEEEeCC--C----CEEEcCCCc-EEecCEEEEccCCCccc
Q 012545 86 GIELILSTEIVRADIA--S----KTLLSATGL-IFKYQILVIATGSTVSI 128 (461)
Q Consensus 86 ~v~~~~~~~v~~i~~~--~----~~v~~~~~~-~~~~d~liiAtG~~~~~ 128 (461)
|++++.++.|.+++.+ . ..+.+.+|+ ++++|.+|+|+|.+|..
T Consensus 269 GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~ 318 (523)
T 1mo9_A 269 GMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRS 318 (523)
T ss_dssp TCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECC
T ss_pred CcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCC
Confidence 9999999999999863 3 236677776 79999999999999853
No 255
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.09 E-value=2.3e-05 Score=74.16 Aligned_cols=98 Identities=14% Similarity=0.104 Sum_probs=74.3
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEccCCc---cC--------C---cccCHHHHHHHHHHHHhcCcEEEcCCcEEE
Q 012545 192 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPW---CM--------P---RLFTADIAAFYEGYYANKGIKIIKGTVAVG 257 (461)
Q Consensus 192 ~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~---~~--------~---~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~ 257 (461)
.|+|||+|+.|+.+|..+++.|.+|+++++... ++ + ....+++.........+.+..+..+..+..
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDIKSV 87 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEECCCCEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccceeeeee
Confidence 589999999999999999999999999987531 10 1 112356777777888888888888777666
Q ss_pred EEecCCCCEEEEEeCCCcEEecCEEEEccCCCCChh
Q 012545 258 FTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLIS 293 (461)
Q Consensus 258 i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~~ 293 (461)
... .. ..+...+++++.+|.+|+|||.+|...
T Consensus 88 ~~~--~~--~~~~~~~~~~~~~d~liiAtGs~~~~~ 119 (312)
T 4gcm_A 88 EDK--GE--YKVINFGNKELTAKAVIIATGAEYKKI 119 (312)
T ss_dssp EEC--SS--CEEEECSSCEEEEEEEEECCCEEECCC
T ss_pred eee--ec--ceeeccCCeEEEeceeEEcccCccCcC
Confidence 554 22 245567788999999999999877553
No 256
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.08 E-value=4.5e-05 Score=72.22 Aligned_cols=167 Identities=16% Similarity=0.149 Sum_probs=104.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCcEEEEccCCccCCcc-------------------------------------c
Q 012545 190 NGKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWCMPRL-------------------------------------F 230 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~--g~~Vtli~~~~~~~~~~-------------------------------------~ 230 (461)
..+|+|||+|+.|+.+|..|++. |.+|+++++.+.+.... .
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~ 144 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKH 144 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcc
Confidence 44899999999999999999998 99999999865442110 1
Q ss_pred CHHHHHHHHHHHHhc-CcEEEcCCcEEEEEecC--C-C--CEEEEEeC--------------CCcEEec-----------
Q 012545 231 TADIAAFYEGYYANK-GIKIIKGTVAVGFTTNA--D-G--EVKEVKLK--------------DGRTLEA----------- 279 (461)
Q Consensus 231 ~~~~~~~~~~~l~~~-GV~v~~~~~v~~i~~~~--~-g--~~~~v~~~--------------~G~~i~a----------- 279 (461)
..++.+.+.+.+.+. |++++.+++|+++..++ + + ++.+|.+. ++.++.|
T Consensus 145 ~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~ 224 (326)
T 2gjc_A 145 AALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDL 224 (326)
T ss_dssp HHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCS
T ss_pred hHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccc
Confidence 233455566666664 99999999999998743 3 4 77777652 3457999
Q ss_pred ----CEEEEccCCCCChh-hhhccc---ccC---CCc----------EEeCCCCC-CCCCCEEEeCcccccCccccCcce
Q 012545 280 ----DIVVVGVGGRPLIS-LFKGQV---AEN---KGG----------IETDDFFK-TSADDVYAVGDVATFPMKLYREMR 337 (461)
Q Consensus 280 ----D~vi~a~G~~p~~~-~~~~~~---~~~---~g~----------i~vd~~~~-t~~~~vya~GD~~~~~~~~~~~~~ 337 (461)
+.||.|+|...... ++...+ ... .|- ..|+..-. +-+|++|++|-.+..-.... +
T Consensus 225 ~~~~~~VV~ATG~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~---r 301 (326)
T 2gjc_A 225 SQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGMEVAELDGLN---R 301 (326)
T ss_dssp STTCCEEEECCCCC--CCSHHHHHHHHHHSSCCCCCCCCBCHHHHHHHHHHHCEECTTSTTEEECTHHHHHHHTCC---B
T ss_pred cccCCEEEECcCCCchHHHHHHhhccccccccccCceeccccccchhheeecCCCccccCCEEECChHHHHhcCCC---C
Confidence 99999999765432 321110 000 010 11111112 15899999998874321100 0
Q ss_pred eeccHHHHHHHHHHHHHHHhcc
Q 012545 338 RVEHVDHARKSAEQAVKTIMAT 359 (461)
Q Consensus 338 ~~~~~~~A~~~g~~aa~~i~~~ 359 (461)
--+....-..+|+.||+.|+..
T Consensus 302 ~g~~fg~m~~sg~~~a~~~~~~ 323 (326)
T 2gjc_A 302 MGPTFGAMALSGVHAAEQILKH 323 (326)
T ss_dssp CCSCCHHHHHHHHHHHHHHHHH
T ss_pred CChhhhhhhhhhHHHHHHHHHH
Confidence 0022223346889999888753
No 257
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.08 E-value=2.3e-05 Score=80.78 Aligned_cols=100 Identities=15% Similarity=0.293 Sum_probs=76.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCc-cC-----------------------Cc-----------------
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW-CM-----------------------PR----------------- 228 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~-~~-----------------------~~----------------- 228 (461)
.-.|+|||+|..|+++|..+++.|.+|+++++.+. +. ..
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l~ 100 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRMLN 100 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEEC
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhcc
Confidence 34799999999999999999999999999998631 10 00
Q ss_pred ------------ccC-HHHHHHHHHHHHhc-CcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCC
Q 012545 229 ------------LFT-ADIAAFYEGYYANK-GIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPL 291 (461)
Q Consensus 229 ------------~~~-~~~~~~~~~~l~~~-GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~ 291 (461)
..+ ..+.+.+.+.+++. |++++. ..|+.+.. +++.+.+|.+.+|+++.||.||+|+|..++
T Consensus 101 ~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~-~~V~~L~~-d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 101 RSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQ-DTVIGVSA-NSGKFSSVTVRSGRAIQAKAAILACGTFLN 175 (641)
T ss_dssp SSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEE-ETTEEEEEEETTSCEEEEEEEEECCTTCBT
T ss_pred cccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEe-eEEEEEEe-cCCEEEEEEECCCcEEEeCEEEECcCCCCC
Confidence 001 13455666777774 999964 58999876 356666788999999999999999997754
No 258
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.08 E-value=7.9e-06 Score=82.41 Aligned_cols=99 Identities=13% Similarity=0.193 Sum_probs=73.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
..+++|||+|+.|+.+|..|++.|.+ |+++++.+... .+ . +.. .......+.+++
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l-~~-~-------------~~~-------~~~~~l~~~l~~ 232 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGAD---VTAVEFLGHVG-GV-G-------------IDM-------EISKNFQRILQK 232 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSS-CS-S-------------CCH-------HHHHHHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCE---EEEEeccCccC-Cc-c-------------cCH-------HHHHHHHHHHHH
Confidence 46899999999999999999999876 99999986411 00 0 000 001234567788
Q ss_pred cCcEEEcCCeEEEEeCCCC---EEE-----cCCCcEEecCEEEEccCCCccc
Q 012545 85 KGIELILSTEIVRADIASK---TLL-----SATGLIFKYQILVIATGSTVSI 128 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~---~v~-----~~~~~~~~~d~liiAtG~~~~~ 128 (461)
.|++++.++.+.+++.+.. .+. ..+++++++|.+|+|+|.+|..
T Consensus 233 ~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~ 284 (474)
T 1zmd_A 233 QGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFT 284 (474)
T ss_dssp TTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECC
T ss_pred CCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCC
Confidence 9999999999999986553 233 2456689999999999999854
No 259
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.08 E-value=6.2e-06 Score=83.53 Aligned_cols=98 Identities=15% Similarity=0.258 Sum_probs=73.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
.++++|||+|+.|+.+|..|++.|.+ |+++++.+... .. .+. . .......+.+++
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~~l------~~-~~~----~-----------~~~~~l~~~l~~ 248 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKE---VVLIDVVDTCL------AG-YYD----R-----------DLTDLMAKNMEE 248 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSTT------TT-TSC----H-----------HHHHHHHHHHHT
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCe---EEEEEcccchh------hh-HHH----H-----------HHHHHHHHHHHh
Confidence 57899999999999999999999876 99999986421 00 000 0 001234566778
Q ss_pred cCcEEEcCCeEEEEeCCCC--EEEcCCCcEEecCEEEEccCCCccc
Q 012545 85 KGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVSI 128 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~liiAtG~~~~~ 128 (461)
.||+++.++.+.+++.+++ .+.+ +++++++|.+|+|+|.+|..
T Consensus 249 ~GV~i~~~~~v~~i~~~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~ 293 (490)
T 2bc0_A 249 HGIQLAFGETVKEVAGNGKVEKIIT-DKNEYDVDMVILAVGFRPNT 293 (490)
T ss_dssp TTCEEEETCCEEEEECSSSCCEEEE-SSCEEECSEEEECCCEEECC
T ss_pred CCeEEEeCCEEEEEEcCCcEEEEEE-CCcEEECCEEEECCCCCcCh
Confidence 9999999999999986443 3555 66789999999999998854
No 260
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.07 E-value=1.7e-05 Score=78.12 Aligned_cols=100 Identities=25% Similarity=0.360 Sum_probs=76.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCc-----------------------------------------
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR----------------------------------------- 228 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~----------------------------------------- 228 (461)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+.+...
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~g 102 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRSG 102 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCCC
Confidence 568999999999999999999999999999987643100
Q ss_pred ----cc-----------------CHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccC
Q 012545 229 ----LF-----------------TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVG 287 (461)
Q Consensus 229 ----~~-----------------~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G 287 (461)
.+ ...+.+.+.+.+++ ++++++++|++++.++++ ..+++.+|+++.+|.||.|.|
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~--v~v~~~~g~~~~a~~vV~AdG 178 (407)
T 3rp8_A 103 ENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADG--VTVWFTDGSSASGDLLIAADG 178 (407)
T ss_dssp CEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTE--EEEEETTSCEEEESEEEECCC
T ss_pred CEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCc--EEEEEcCCCEEeeCEEEECCC
Confidence 00 01233444555544 889999999999874333 568899999999999999999
Q ss_pred CCCChh
Q 012545 288 GRPLIS 293 (461)
Q Consensus 288 ~~p~~~ 293 (461)
......
T Consensus 179 ~~S~vr 184 (407)
T 3rp8_A 179 SHSALR 184 (407)
T ss_dssp TTCSSH
T ss_pred cChHHH
Confidence 876553
No 261
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.07 E-value=7.4e-06 Score=82.36 Aligned_cols=98 Identities=17% Similarity=0.212 Sum_probs=73.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
..+++|||||+.|+.+|..|++.|.+ |+++++.+..- +... .. ......+.+++
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l---~~~~---------~~-----------~~~~l~~~l~~ 224 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVD---VTIVEFLPRAL---PNED---------AD-----------VSKEIEKQFKK 224 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSS---TTSC---------HH-----------HHHHHHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCe---EEEEEcCCccc---cccC---------HH-----------HHHHHHHHHHH
Confidence 47899999999999999999999876 99999985311 0000 00 01234566778
Q ss_pred cCcEEEcCCeEEEEeCCCC--EEEcC-CC--cEEecCEEEEccCCCccc
Q 012545 85 KGIELILSTEIVRADIASK--TLLSA-TG--LIFKYQILVIATGSTVSI 128 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~--~v~~~-~~--~~~~~d~liiAtG~~~~~ 128 (461)
.||+++.++.+.+++.+.. .+.+. +| +++.+|.+++|+|.+|+.
T Consensus 225 ~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~ 273 (464)
T 2a8x_A 225 LGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNV 273 (464)
T ss_dssp HTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEECC
T ss_pred cCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCccC
Confidence 8999999999999986543 34443 55 579999999999999854
No 262
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.06 E-value=4.4e-06 Score=84.46 Aligned_cols=98 Identities=12% Similarity=0.137 Sum_probs=73.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
..+++|||||+.|+.+|..|++.|.+ |+|+++.+... +... .. ......+.+++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~---Vtlv~~~~~~l---~~~~---------~~-----------~~~~l~~~l~~ 238 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSR---LDVVEMMDGLM---QGAD---------RD-----------LVKVWQKQNEY 238 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCE---EEEECSSSSSS---TTSC---------HH-----------HHHHHHHHHGG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCe---EEEEEECCccc---cccC---------HH-----------HHHHHHHHHHh
Confidence 47899999999999999999999876 99999986411 0000 00 01234566778
Q ss_pred cCcEEEcCCeEEEEeCCCC--EEEcCC----CcEEecCEEEEccCCCccc
Q 012545 85 KGIELILSTEIVRADIASK--TLLSAT----GLIFKYQILVIATGSTVSI 128 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~--~v~~~~----~~~~~~d~liiAtG~~~~~ 128 (461)
.||+++.++.+.+++.+.. .+.+.+ ++++.+|.+++|+|.+|+.
T Consensus 239 ~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 239 RFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNG 288 (482)
T ss_dssp GEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEECG
T ss_pred cCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCC
Confidence 8999999999999976543 355555 6678999999999999854
No 263
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.05 E-value=1.1e-05 Score=81.89 Aligned_cols=98 Identities=15% Similarity=0.276 Sum_probs=75.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
..+++|||+|+.|+.+|..|++.|.+ |+++++.+... +... .. ....+.+.+++
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~~l---~~~d---------~~-----------~~~~l~~~l~~ 235 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVP---VTVVASQDHVL---PYED---------AD-----------AALVLEESFAE 235 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCC---EEEECSSSSSS---CCSS---------HH-----------HHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCe---EEEEEcCCccc---cccC---------HH-----------HHHHHHHHHHH
Confidence 46899999999999999999999876 99999886421 0000 00 01234567788
Q ss_pred cCcEEEcCCeEEEEeCCCC--EEEcCCCcEEecCEEEEccCCCccc
Q 012545 85 KGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVSI 128 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~liiAtG~~~~~ 128 (461)
.|++++.++.|.+++.+.. .+.+.+++++.+|.+|+|+|.+|..
T Consensus 236 ~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 236 RGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp TTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred CCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 9999999999999986553 3555677789999999999999854
No 264
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.04 E-value=2.5e-05 Score=76.77 Aligned_cols=101 Identities=20% Similarity=0.284 Sum_probs=72.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCc----cc---C---HHH-------------------------
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR----LF---T---ADI------------------------- 234 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~----~~---~---~~~------------------------- 234 (461)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+..+ .+ . ..+
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 105 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADEK 105 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECCC
Confidence 468999999999999999999999999999987643211 00 0 000
Q ss_pred ---------------------HHHHHHHHHhc--CcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCC
Q 012545 235 ---------------------AAFYEGYYANK--GIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPL 291 (461)
Q Consensus 235 ---------------------~~~~~~~l~~~--GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~ 291 (461)
...+.+.|.+. +++++++++|++++.++++ ..|++.+|+++.+|.||.|.|....
T Consensus 106 g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~--v~v~~~~g~~~~ad~vV~AdG~~S~ 183 (398)
T 2xdo_A 106 GNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKK--WTLTFENKPSETADLVILANGGMSK 183 (398)
T ss_dssp SEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSS--EEEEETTSCCEEESEEEECSCTTCS
T ss_pred CCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCE--EEEEECCCcEEecCEEEECCCcchh
Confidence 01112222221 3578899999999874433 4688899989999999999998664
Q ss_pred h
Q 012545 292 I 292 (461)
Q Consensus 292 ~ 292 (461)
.
T Consensus 184 v 184 (398)
T 2xdo_A 184 V 184 (398)
T ss_dssp C
T ss_pred H
Confidence 3
No 265
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.03 E-value=2.8e-05 Score=75.41 Aligned_cols=55 Identities=15% Similarity=0.163 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCC
Q 012545 233 DIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRP 290 (461)
Q Consensus 233 ~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p 290 (461)
.+.+.+.+.+++.|++++.+++|+++..++++ ..|++.+| ++.+|.||+|+|...
T Consensus 150 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~--~~v~~~~g-~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 150 LAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDG--VTIETADG-EYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSSS--EEEEESSC-EEEEEEEEECCGGGG
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCE--EEEEECCC-eEEcCEEEEcCCccH
Confidence 34455667778889999999999999874333 46788888 599999999999643
No 266
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.03 E-value=4.7e-05 Score=74.77 Aligned_cols=100 Identities=15% Similarity=0.153 Sum_probs=73.6
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCc------ccCHHH-------------------------------
Q 012545 192 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR------LFTADI------------------------------- 234 (461)
Q Consensus 192 ~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~------~~~~~~------------------------------- 234 (461)
+|+|||+|+.|+-+|..|++.|.+|+++++.+.+... .+.+..
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~~ 82 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFYN 82 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEec
Confidence 7999999999999999999999999999987654221 011111
Q ss_pred ----------------------------HHHHHHHHH-hcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEc
Q 012545 235 ----------------------------AAFYEGYYA-NKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVG 285 (461)
Q Consensus 235 ----------------------------~~~~~~~l~-~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a 285 (461)
...+.+.|. ..+..+++++++++++..+++. ..|+++||+++++|+||-|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~-v~v~~~dG~~~~adlvVgA 161 (412)
T 4hb9_A 83 ERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLANTIQWNKTFVRYEHIENGG-IKIFFADGSHENVDVLVGA 161 (412)
T ss_dssp TTSCEEEC--------------CEEEEEHHHHHHHHHTTCTTTEECSCCEEEEEECTTSC-EEEEETTSCEEEESEEEEC
T ss_pred CCcceecccCCccccccccccccceEeeHHHHHHHHHhhccceEEEEEEEEeeeEcCCCe-EEEEECCCCEEEeeEEEEC
Confidence 011223332 2345688899999998755554 4789999999999999999
Q ss_pred cCCCCCh
Q 012545 286 VGGRPLI 292 (461)
Q Consensus 286 ~G~~p~~ 292 (461)
-|.+...
T Consensus 162 DG~~S~v 168 (412)
T 4hb9_A 162 DGSNSKV 168 (412)
T ss_dssp CCTTCHH
T ss_pred CCCCcch
Confidence 9987644
No 267
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.02 E-value=7.9e-06 Score=81.84 Aligned_cols=98 Identities=17% Similarity=0.261 Sum_probs=72.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
..+++|||+|+.|+.+|..|++.|.+ |+++++.+... . . .+. . .....+.+.+++
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l-~-----~-~~~----~-----------~~~~~l~~~l~~ 203 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYN---VNLIDGHERVL-Y-----K-YFD----K-----------EFTDILAKDYEA 203 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCE---EEEEESSSSTT-T-----T-TSC----H-----------HHHHHHHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCE---EEEEEcCCchh-h-----h-hhh----h-----------hHHHHHHHHHHH
Confidence 47899999999999999999998876 99999986321 0 0 000 0 001234566788
Q ss_pred cCcEEEcCCeEEEEeCCCCE---EEcCCCcEEecCEEEEccCCCccc
Q 012545 85 KGIELILSTEIVRADIASKT---LLSATGLIFKYQILVIATGSTVSI 128 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~---v~~~~~~~~~~d~liiAtG~~~~~ 128 (461)
.|++++.++++.+++.++.. +.+ +++++++|.+|+|+|.+|..
T Consensus 204 ~Gv~i~~~~~v~~i~~~~~~v~~v~~-~g~~i~~D~vv~a~G~~p~~ 249 (452)
T 2cdu_A 204 HGVNLVLGSKVAAFEEVDDEIITKTL-DGKEIKSDIAILCIGFRPNT 249 (452)
T ss_dssp TTCEEEESSCEEEEEEETTEEEEEET-TSCEEEESEEEECCCEEECC
T ss_pred CCCEEEcCCeeEEEEcCCCeEEEEEe-CCCEEECCEEEECcCCCCCH
Confidence 99999999999999863332 344 67789999999999999854
No 268
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.01 E-value=4.3e-05 Score=77.80 Aligned_cols=101 Identities=18% Similarity=0.237 Sum_probs=76.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccC--------Cc----------------------------------
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM--------PR---------------------------------- 228 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~--------~~---------------------------------- 228 (461)
.+|+|||+|..|+-+|..|++.|.+|+++++.+... +.
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~~ 87 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGKEP 87 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSSCS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecCCc
Confidence 479999999999999999999999999999875100 00
Q ss_pred -------------------cc-CHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEE--eCCCc--EEecCEEEE
Q 012545 229 -------------------LF-TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVK--LKDGR--TLEADIVVV 284 (461)
Q Consensus 229 -------------------~~-~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~--~~~G~--~i~aD~vi~ 284 (461)
.+ ...+.+.+.+.+++.|++++.+++|+++.. +++.+..|. +.+|+ ++.+|.||.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~-~~~~v~gv~~~~~dG~~~~i~ad~VI~ 166 (512)
T 3e1t_A 88 EPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLF-EGERAVGVRYRNTEGVELMAHARFIVD 166 (512)
T ss_dssp SCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEE-ETTEEEEEEEECSSSCEEEEEEEEEEE
T ss_pred cccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEE-ECCEEEEEEEEeCCCCEEEEEcCEEEE
Confidence 00 123455677778889999999999999987 455544444 45674 799999999
Q ss_pred ccCCCCCh
Q 012545 285 GVGGRPLI 292 (461)
Q Consensus 285 a~G~~p~~ 292 (461)
|+|.....
T Consensus 167 AdG~~S~v 174 (512)
T 3e1t_A 167 ASGNRTRV 174 (512)
T ss_dssp CCCTTCSS
T ss_pred CCCcchHH
Confidence 99986543
No 269
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.01 E-value=1.1e-05 Score=81.22 Aligned_cols=98 Identities=18% Similarity=0.279 Sum_probs=72.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHH-H
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY-K 83 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 83 (461)
..+++|||+|+.|+.+|..|++.|.+ |+++++.+... +... .. ....+.+.+ +
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l---~~~d---------~~-----------~~~~l~~~l~~ 227 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAE---VTVVEFAPRCA---PTLD---------ED-----------VTNALVGALAK 227 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSS---TTSC---------HH-----------HHHHHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCE---EEEEecCCccc---ccCC---------HH-----------HHHHHHHHHhh
Confidence 47899999999999999999999876 99999985411 0000 00 012345667 8
Q ss_pred HcCcEEEcCCeEEEEeCCCC--EEEcC--CC--cEEecCEEEEccCCCccc
Q 012545 84 EKGIELILSTEIVRADIASK--TLLSA--TG--LIFKYQILVIATGSTVSI 128 (461)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~--~v~~~--~~--~~~~~d~liiAtG~~~~~ 128 (461)
+.|++++.++++.+++.+.. .+.+. +| +++++|.+++|+|.+|+.
T Consensus 228 ~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~ 278 (468)
T 2qae_A 228 NEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFT 278 (468)
T ss_dssp HTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEEECC
T ss_pred cCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcccCC
Confidence 89999999999999986543 34443 55 579999999999999854
No 270
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.00 E-value=2.5e-05 Score=80.42 Aligned_cols=99 Identities=23% Similarity=0.293 Sum_probs=77.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccC-------------------------------------Cc-----
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM-------------------------------------PR----- 228 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~-------------------------------------~~----- 228 (461)
..|+|||+|+.|+-+|..|++.|.+|+++++.+... ..
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 129 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQG 129 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTTC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccccc
Confidence 479999999999999999999999999999764311 00
Q ss_pred ---------------ccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEe--CCC-cEEecCEEEEccCCCC
Q 012545 229 ---------------LFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKL--KDG-RTLEADIVVVGVGGRP 290 (461)
Q Consensus 229 ---------------~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~--~~G-~~i~aD~vi~a~G~~p 290 (461)
.-...+.+.+.+.+++.|++++.+++|++++.++++. .|++ .+| +++.+|.||.|.|.+.
T Consensus 130 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v--~v~~~~~~G~~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 130 LDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAV--EVTVAGPSGPYPVRARYGVGCDGGRS 207 (570)
T ss_dssp CBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCE--EEEEEETTEEEEEEESEEEECSCSSC
T ss_pred ccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeE--EEEEEeCCCcEEEEeCEEEEcCCCCc
Confidence 0013456677788888899999999999998755553 4555 788 7899999999999865
Q ss_pred C
Q 012545 291 L 291 (461)
Q Consensus 291 ~ 291 (461)
.
T Consensus 208 ~ 208 (570)
T 3fmw_A 208 T 208 (570)
T ss_dssp H
T ss_pred h
Confidence 3
No 271
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.00 E-value=6.9e-06 Score=82.72 Aligned_cols=98 Identities=17% Similarity=0.325 Sum_probs=73.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
..+++|||+|+.|+.+|..|++.|.+ |+++++.+... +... .. ......+.+++
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~---Vtli~~~~~~l---~~~~---------~~-----------~~~~l~~~l~~ 230 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSE---VTVVEFASEIV---PTMD---------AE-----------IRKQFQRSLEK 230 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCE---EEEECSSSSSS---TTSC---------HH-----------HHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCc---EEEEEcCCccc---cccc---------HH-----------HHHHHHHHHHH
Confidence 47899999999999999999999876 99999986421 0000 00 01234566788
Q ss_pred cCcEEEcCCeEEEEeCCCC--EEEcC---CC--cEEecCEEEEccCCCccc
Q 012545 85 KGIELILSTEIVRADIASK--TLLSA---TG--LIFKYQILVIATGSTVSI 128 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~--~v~~~---~~--~~~~~d~liiAtG~~~~~ 128 (461)
.||+++.++.+.+++.+.. .+.+. ++ +++++|.+++|+|.+|..
T Consensus 231 ~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~ 281 (470)
T 1dxl_A 231 QGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFT 281 (470)
T ss_dssp SSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEECC
T ss_pred cCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcCC
Confidence 9999999999999987653 34433 34 679999999999999853
No 272
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.00 E-value=8.4e-06 Score=84.12 Aligned_cols=101 Identities=15% Similarity=0.188 Sum_probs=72.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHC--CCcEEEEccCCccCCcc--cCH-----------HHHHHHHHHHHhcCcEEEcCCcE
Q 012545 191 GKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWCMPRL--FTA-----------DIAAFYEGYYANKGIKIIKGTVA 255 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~--g~~Vtli~~~~~~~~~~--~~~-----------~~~~~~~~~l~~~GV~v~~~~~v 255 (461)
++|+|||+|+.|+.+|..|++. +.+|+++++.+.+.-.. ++. .+.+......++.|++++++++|
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V 81 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRVKHEV 81 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEECCEE
Confidence 4799999999999999999998 78999999987642100 000 01112334445589999999999
Q ss_pred EEEEecCCCCEEEEEe-CCCc--EEecCEEEEccCCCCChh
Q 012545 256 VGFTTNADGEVKEVKL-KDGR--TLEADIVVVGVGGRPLIS 293 (461)
Q Consensus 256 ~~i~~~~~g~~~~v~~-~~G~--~i~aD~vi~a~G~~p~~~ 293 (461)
++++. +++...+.. .+|+ ++.+|.+|+|||.+|...
T Consensus 82 ~~id~--~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p 120 (565)
T 3ntd_A 82 VAIDR--AAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIVP 120 (565)
T ss_dssp EEEET--TTTEEEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEEC--CCCEEEEEecCCCCeEEEECCEEEECCCCCCCCC
Confidence 99986 444334443 3354 789999999999877653
No 273
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.99 E-value=4.2e-06 Score=83.82 Aligned_cols=90 Identities=16% Similarity=0.149 Sum_probs=70.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCcc-------CCcc-cCHHHHHHHHHHHHhcCcEEEcCCcEEEEEe
Q 012545 189 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC-------MPRL-FTADIAAFYEGYYANKGIKIIKGTVAVGFTT 260 (461)
Q Consensus 189 ~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~-------~~~~-~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~ 260 (461)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+ ++.+ ++.++.+...+.+++.||++++++.+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~---- 196 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEVG---- 196 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHTTCEEETTCCBT----
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCcEEEeCCEec----
Confidence 3568999999999999999999999999999998764 2221 466777888889999999999998752
Q ss_pred cCCCCEEEEEeCCCcEEecCEEEEccCCC
Q 012545 261 NADGEVKEVKLKDGRTLEADIVVVGVGGR 289 (461)
Q Consensus 261 ~~~g~~~~v~~~~G~~i~aD~vi~a~G~~ 289 (461)
. .+.++++ .+.+|.||+|+|..
T Consensus 197 --~----~v~~~~~-~~~~d~vvlAtG~~ 218 (456)
T 2vdc_G 197 --R----DASLPEL-RRKHVAVLVATGVY 218 (456)
T ss_dssp --T----TBCHHHH-HSSCSEEEECCCCC
T ss_pred --c----EEEhhHh-HhhCCEEEEecCCC
Confidence 0 1223333 35799999999986
No 274
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.99 E-value=4e-05 Score=78.46 Aligned_cols=100 Identities=24% Similarity=0.253 Sum_probs=77.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCC-------------------------------------------
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP------------------------------------------- 227 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~------------------------------------------- 227 (461)
..|+|||+|+.|+-+|..|++.|.+|+++++.+....
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 85 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRLAE 85 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEEES
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeEEe
Confidence 4799999999999999999999999999998753200
Q ss_pred ------------c------------------ccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCC--EEEEEeCCC-
Q 012545 228 ------------R------------------LFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGE--VKEVKLKDG- 274 (461)
Q Consensus 228 ------------~------------------~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~--~~~v~~~~G- 274 (461)
. .-...+.+.+.+.+++.|++++++++|++++.++++. ...+++.++
T Consensus 86 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~ 165 (535)
T 3ihg_A 86 SVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPD 165 (535)
T ss_dssp SSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETT
T ss_pred ccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCC
Confidence 0 0012445667788888899999999999999744411 245666665
Q ss_pred --cEEecCEEEEccCCCC
Q 012545 275 --RTLEADIVVVGVGGRP 290 (461)
Q Consensus 275 --~~i~aD~vi~a~G~~p 290 (461)
.++.||.||.|.|...
T Consensus 166 ~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 166 GEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp EEEEEEEEEEEECCCTTC
T ss_pred CeEEEEeCEEEECCCCcc
Confidence 6899999999999754
No 275
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.97 E-value=1.7e-05 Score=80.09 Aligned_cols=98 Identities=20% Similarity=0.277 Sum_probs=75.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
..+++|||+|+.|+.+|..|++.|.+ |+++++.+... +... .. ....+.+.+++
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~---Vtli~~~~~~l---~~~~---------~~-----------~~~~l~~~l~~ 244 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVK---TTLLHRGDLIL---RNFD---------YD-----------LRQLLNDAMVA 244 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSS---TTSC---------HH-----------HHHHHHHHHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCe---EEEEECCCccc---cccC---------HH-----------HHHHHHHHHHH
Confidence 47899999999999999999998876 99999886311 0000 00 01234566778
Q ss_pred cCcEEEcCCeEEEEeCCCC--EEEcCCCcEEecCEEEEccCCCccc
Q 012545 85 KGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVSI 128 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~liiAtG~~~~~ 128 (461)
.|++++.++.|.+++.+.. .+.+.+|+++.+|.+|+|+|.+|..
T Consensus 245 ~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~ 290 (484)
T 3o0h_A 245 KGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPNT 290 (484)
T ss_dssp HTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred CCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcCC
Confidence 8999999999999986543 4677888889999999999998853
No 276
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.97 E-value=6.3e-05 Score=77.04 Aligned_cols=56 Identities=29% Similarity=0.474 Sum_probs=45.8
Q ss_pred HHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCCh
Q 012545 236 AFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 292 (461)
Q Consensus 236 ~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~ 292 (461)
+.+.+.+++.|++++.+ +|+++..++++.+..|++.+|+++.+|.||.|.|.....
T Consensus 169 ~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~ 224 (538)
T 2aqj_A 169 DFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLL 224 (538)
T ss_dssp HHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCC
T ss_pred HHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhh
Confidence 44556667789999999 899998755666678899999899999999999976544
No 277
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.95 E-value=1.4e-05 Score=80.71 Aligned_cols=101 Identities=17% Similarity=0.206 Sum_probs=71.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHC--CCcEEEEccCCccCCcc--c----------CHHHHHHHHHHH-HhcCcEEEcCCcE
Q 012545 191 GKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWCMPRL--F----------TADIAAFYEGYY-ANKGIKIIKGTVA 255 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~--g~~Vtli~~~~~~~~~~--~----------~~~~~~~~~~~l-~~~GV~v~~~~~v 255 (461)
.+|+|||+|+.|+.+|..|++. |.+|+++++.+...... + ..++.....+.+ ++.|++++.+++|
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~~~~v 116 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHEV 116 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEESSEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEeCCEE
Confidence 5799999999999999999986 89999999887531100 0 011111223445 4459999999999
Q ss_pred EEEEecCCCCEEEEEe-CCCc--EEecCEEEEccCCCCChh
Q 012545 256 VGFTTNADGEVKEVKL-KDGR--TLEADIVVVGVGGRPLIS 293 (461)
Q Consensus 256 ~~i~~~~~g~~~~v~~-~~G~--~i~aD~vi~a~G~~p~~~ 293 (461)
+.++. +.....+.. .+|+ ++.+|.+|+|+|.+|...
T Consensus 117 ~~i~~--~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p 155 (480)
T 3cgb_A 117 TKVDT--EKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVMP 155 (480)
T ss_dssp EEEET--TTTEEEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEEC--CCCEEEEEEcCCCceEEEEcCEEEECCCCcccCC
Confidence 99976 333334444 4576 799999999999877643
No 278
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.95 E-value=8.3e-06 Score=85.64 Aligned_cols=35 Identities=29% Similarity=0.424 Sum_probs=32.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHH-----cCCCCCcEEEEeCCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAK-----QGVKPGELAIISKEAV 42 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~-----~g~~~~~V~vie~~~~ 42 (461)
.+||+||||||+|+++|..|++ .|++ |+|||+.+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~---v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLK---VRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCC---EEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCC---EEEEeCCCC
Confidence 5799999999999999999999 8987 999999764
No 279
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.94 E-value=2e-05 Score=79.29 Aligned_cols=96 Identities=19% Similarity=0.259 Sum_probs=72.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
..+++|||+|+.|+.+|..|++.|.+ |+++++.+... + .. .. ....+.+.+++
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l---~-~~---------~~-----------~~~~l~~~l~~ 228 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSK---VTVLARNTLFF---R-ED---------PA-----------IGEAVTAAFRA 228 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSCTTT---T-SC---------HH-----------HHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCE---EEEEEECCccC---C-CC---------HH-----------HHHHHHHHHHh
Confidence 47899999999999999999999876 99999986311 0 00 00 01234567788
Q ss_pred cCcEEEcCCeEEEEeCCCCE--EEcCCCcEEecCEEEEccCCCccc
Q 012545 85 KGIELILSTEIVRADIASKT--LLSATGLIFKYQILVIATGSTVSI 128 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~--v~~~~~~~~~~d~liiAtG~~~~~ 128 (461)
.|++++.++.+.+++.++.. +.+. +.++++|.+|+|+|.+|..
T Consensus 229 ~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~ 273 (467)
T 1zk7_A 229 EGIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRTPNT 273 (467)
T ss_dssp TTCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEEESC
T ss_pred CCCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCCcCC
Confidence 99999999999999765543 4454 4579999999999998853
No 280
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.93 E-value=9.4e-05 Score=70.44 Aligned_cols=168 Identities=15% Similarity=0.076 Sum_probs=105.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCcEEEEccCCccCCc---------------------------------c----c
Q 012545 190 NGKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWCMPR---------------------------------L----F 230 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~--g~~Vtli~~~~~~~~~---------------------------------~----~ 230 (461)
...|+|||+|..|+.+|..|++. |.+|+++++.+.+... + .
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~ 158 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKH 158 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEec
Confidence 45799999999999999999997 9999999987543200 0 0
Q ss_pred CHHHHHHHHHHHHh-cCcEEEcCCcEEEEEecCC----------------C--CEEEEEeC--------------CCcEE
Q 012545 231 TADIAAFYEGYYAN-KGIKIIKGTVAVGFTTNAD----------------G--EVKEVKLK--------------DGRTL 277 (461)
Q Consensus 231 ~~~~~~~~~~~l~~-~GV~v~~~~~v~~i~~~~~----------------g--~~~~v~~~--------------~G~~i 277 (461)
..++.+.+.+.+++ .|++++.++.++++..+++ + ++.+|... ++.++
T Consensus 159 ~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i 238 (344)
T 3jsk_A 159 AALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTI 238 (344)
T ss_dssp HHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEE
Confidence 23444566666777 5999999999999876432 3 56666552 23579
Q ss_pred ecCEEEEccCCCCCh-hhh-----hccccc-CCCcEEeCCC-------CCC--CCCCEEEeCcccccCccccCcceeecc
Q 012545 278 EADIVVVGVGGRPLI-SLF-----KGQVAE-NKGGIETDDF-------FKT--SADDVYAVGDVATFPMKLYREMRRVEH 341 (461)
Q Consensus 278 ~aD~vi~a~G~~p~~-~~~-----~~~~~~-~~g~i~vd~~-------~~t--~~~~vya~GD~~~~~~~~~~~~~~~~~ 341 (461)
.++.||.|+|..... .++ ..++.. -.|.-..+-. -.| -+|++|++|=.+.--. |.++--+.
T Consensus 239 ~Ak~VV~ATG~~s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~t~~v~~gl~~~gm~~~~~~---g~~rmgp~ 315 (344)
T 3jsk_A 239 NAPVIISTTGHDGPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNNTREIVPGLIVGGMELSEID---GANRMGPT 315 (344)
T ss_dssp ECSEEEECCCSSSSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHTCEEEETTEEECGGGHHHHH---TCEECCSC
T ss_pred EcCEEEECCCCCchhhHHHHHHHhhcCcccccCCCcccccccchhhhcccCceEcCCEEEechhhHhhc---CCCCCCcc
Confidence 999999999977652 111 122221 1222122210 012 2799999998775321 11110022
Q ss_pred HHHHHHHHHHHHHHHhccc
Q 012545 342 VDHARKSAEQAVKTIMATE 360 (461)
Q Consensus 342 ~~~A~~~g~~aa~~i~~~~ 360 (461)
...=..+|+.||+.|+..+
T Consensus 316 fg~m~~sg~~~a~~~~~~~ 334 (344)
T 3jsk_A 316 FGAMALSGVKAAHEAIRVF 334 (344)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred cceeeecCHHHHHHHHHHH
Confidence 2223467888888887543
No 281
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.92 E-value=5.5e-06 Score=82.93 Aligned_cols=40 Identities=25% Similarity=0.308 Sum_probs=35.4
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 012545 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (461)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~ 43 (461)
|+++.+||+|||||++||+||..|++.|++ |+|+|+++..
T Consensus 1 m~~~~~~v~iiG~G~~Gl~aA~~l~~~g~~---v~v~E~~~~~ 40 (453)
T 2yg5_A 1 VPTLQRDVAIVGAGPSGLAAATALRKAGLS---VAVIEARDRV 40 (453)
T ss_dssp -CEEEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSS
T ss_pred CCCCcCCEEEECCCHHHHHHHHHHHHCCCc---EEEEECCCCC
Confidence 666678999999999999999999999987 9999998754
No 282
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.92 E-value=9.8e-06 Score=82.18 Aligned_cols=101 Identities=13% Similarity=0.270 Sum_probs=69.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCC---------cccCH-HHHHHHHHHH--HhcCcEEEcCCcEEE
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP---------RLFTA-DIAAFYEGYY--ANKGIKIIKGTVAVG 257 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~---------~~~~~-~~~~~~~~~l--~~~GV~v~~~~~v~~ 257 (461)
.++|+|||+|+.|+.+|..|.+.+.+||+|++.++..- ..+++ ++...+.+.+ ++.+++++.+ ++++
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~~-~v~~ 120 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEA-EATS 120 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEEE-EEEE
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcCCeEEEEE-EEEE
Confidence 35899999999999999999999999999999875321 01111 1111222332 3457888754 6888
Q ss_pred EEecCCCCEEEEEe------------------CCCcEEecCEEEEccCCCCChh
Q 012545 258 FTTNADGEVKEVKL------------------KDGRTLEADIVVVGVGGRPLIS 293 (461)
Q Consensus 258 i~~~~~g~~~~v~~------------------~~G~~i~aD~vi~a~G~~p~~~ 293 (461)
|+. +.+...+.. .++.++++|.+|+|+|.+|+..
T Consensus 121 ID~--~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~ 172 (502)
T 4g6h_A 121 INP--DRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTF 172 (502)
T ss_dssp EEG--GGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCT
T ss_pred EEh--hhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccC
Confidence 876 333333322 3567899999999999988764
No 283
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.92 E-value=2.2e-05 Score=79.45 Aligned_cols=98 Identities=12% Similarity=0.211 Sum_probs=71.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
..+++|||+|+.|+.+|..|++.|.+ |+++++.+... +... .. ......+.+++
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~~l---~~~d---------~~-----------~~~~l~~~l~~ 227 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVI---VKVFGRSGSVA---NLQD---------EE-----------MKRYAEKTFNE 227 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCE---EEEECCTTCCT---TCCC---------HH-----------HHHHHHHHHHT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCe---EEEEEECCccc---ccCC---------HH-----------HHHHHHHHHhh
Confidence 47899999999999999999999876 99999986421 0000 00 01123445555
Q ss_pred cCcEEEcCCeEEEEeCCCCE--EEcC--CC--cEEecCEEEEccCCCcccc
Q 012545 85 KGIELILSTEIVRADIASKT--LLSA--TG--LIFKYQILVIATGSTVSIT 129 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~--v~~~--~~--~~~~~d~liiAtG~~~~~~ 129 (461)
. ++++.++.+.+++.+... +.+. +| +++.+|.+++|+|.+|..+
T Consensus 228 ~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~ 277 (492)
T 3ic9_A 228 E-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKANVD 277 (492)
T ss_dssp T-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEESCS
T ss_pred C-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccCCC
Confidence 6 999999999999765433 4442 56 6799999999999998543
No 284
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.91 E-value=1.3e-05 Score=81.26 Aligned_cols=98 Identities=16% Similarity=0.198 Sum_probs=71.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHc----CCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHh
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQ----GVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPE 80 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~----g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (461)
..+++|||||+.|+.+|..|++. |.+ |+++++.+.. ..+ .++. .......+
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~---V~~v~~~~~~-~~~--------------~l~~-------~~~~~~~~ 234 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTE---VIQLFPEKGN-MGK--------------ILPE-------YLSNWTME 234 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCE---EEEECSSSST-TTT--------------TSCH-------HHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCE---EEEEecCccc-ccc--------------cCCH-------HHHHHHHH
Confidence 46899999999999999998873 444 9999887421 000 0000 00123456
Q ss_pred HHHHcCcEEEcCCeEEEEeCCCC--EEEcCCCcEEecCEEEEccCCCcc
Q 012545 81 WYKEKGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVS 127 (461)
Q Consensus 81 ~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~liiAtG~~~~ 127 (461)
.+++.||+++.++.+.+++.+.. .+.+.+|+++++|.+|+|+|.+|.
T Consensus 235 ~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn 283 (493)
T 1m6i_A 235 KVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPN 283 (493)
T ss_dssp HHHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEEC
T ss_pred HHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCCcc
Confidence 67789999999999999875443 467788889999999999999884
No 285
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.90 E-value=1.7e-05 Score=79.84 Aligned_cols=98 Identities=16% Similarity=0.137 Sum_probs=71.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcc------------------------------cCH-H------
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRL------------------------------FTA-D------ 233 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~------------------------------~~~-~------ 233 (461)
..|+|||+|+.|+.+|..|++.|.+|+++++.+.+...+ ++- .
T Consensus 5 ~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (466)
T 3l8k_A 5 YDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDRKD 84 (466)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHHH
Confidence 369999999999999999999999999999766542110 000 0
Q ss_pred ----HH--HHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcE--EecCEEEEccCCCCChh
Q 012545 234 ----IA--AFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRT--LEADIVVVGVGGRPLIS 293 (461)
Q Consensus 234 ----~~--~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~--i~aD~vi~a~G~~p~~~ 293 (461)
+. ..+.+.+++.|++++.+ ++..+.. + ...|.+.+|++ +.+|.+|+|+|.+|...
T Consensus 85 ~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id~--~--~~~V~~~~g~~~~~~~d~lviAtG~~p~~p 147 (466)
T 3l8k_A 85 YVQELRFKQHKRNMSQYETLTFYKG-YVKIKDP--T--HVIVKTDEGKEIEAETRYMIIASGAETAKL 147 (466)
T ss_dssp HHHHHHHHHHHHHHTTCTTEEEESE-EEEEEET--T--EEEEEETTSCEEEEEEEEEEECCCEEECCC
T ss_pred hheeccccchHHHHHHhCCCEEEEe-EEEEecC--C--eEEEEcCCCcEEEEecCEEEECCCCCccCC
Confidence 01 34445566789999877 5666642 2 35778888888 99999999999877643
No 286
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.90 E-value=1e-05 Score=81.06 Aligned_cols=60 Identities=17% Similarity=0.086 Sum_probs=49.7
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCcEEEEEecC-CCCEEEEEeCCCcEEecCEEEEccCCCCC
Q 012545 231 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNA-DGEVKEVKLKDGRTLEADIVVVGVGGRPL 291 (461)
Q Consensus 231 ~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~-~g~~~~v~~~~G~~i~aD~vi~a~G~~p~ 291 (461)
...+.+.+.+.+++.|++++++++|++|..+. ++++..|.+ +|+++.||.||+++|..|.
T Consensus 241 ~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 241 LGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp TTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 35788889999999999999999999998742 566667777 5788999999999997653
No 287
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.89 E-value=3.1e-05 Score=77.81 Aligned_cols=97 Identities=22% Similarity=0.195 Sum_probs=74.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
.++++|||+|+.|+.+|..|++.|.+ |+++++.+... +... .. ....+.+.+++
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~---Vt~v~~~~~~l---~~~~---------~~-----------~~~~l~~~l~~ 223 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVK---TTLIYRGKEIL---SRFD---------QD-----------MRRGLHAAMEE 223 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSS---TTSC---------HH-----------HHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCe---EEEEEcCCccc---cccC---------HH-----------HHHHHHHHHHH
Confidence 57899999999999999999998876 99999986311 0000 00 01234566788
Q ss_pred cCcEEEcCCeEEEEeCCC-C--EEE-cCCCcEEecCEEEEccCCCccc
Q 012545 85 KGIELILSTEIVRADIAS-K--TLL-SATGLIFKYQILVIATGSTVSI 128 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~-~--~v~-~~~~~~~~~d~liiAtG~~~~~ 128 (461)
.|++++.++.+.+++.+. . .+. +.+|+ +.+|.+|+|+|.+|..
T Consensus 224 ~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~ 270 (463)
T 4dna_A 224 KGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMPNT 270 (463)
T ss_dssp TTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEESC
T ss_pred CCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccCC
Confidence 999999999999998653 2 577 77887 9999999999998854
No 288
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.87 E-value=3.7e-05 Score=77.49 Aligned_cols=98 Identities=15% Similarity=0.270 Sum_probs=72.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
..+++|||+|+.|+.+|..|++.|.+ |+++++.+... +... .. ......+.+++
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~l---~~~~---------~~-----------~~~~l~~~l~~ 233 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAE---VTVLEAMDKFL---PAVD---------EQ-----------VAKEAQKILTK 233 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSSS---TTSC---------HH-----------HHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCc---EEEEecCCCcC---cccC---------HH-----------HHHHHHHHHHh
Confidence 47899999999999999999999876 99999986421 0000 00 01234566778
Q ss_pred cCcEEEcCCeEEEEeCCCC--EEEcCCC---cEEecCEEEEccCCCccc
Q 012545 85 KGIELILSTEIVRADIASK--TLLSATG---LIFKYQILVIATGSTVSI 128 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~--~v~~~~~---~~~~~d~liiAtG~~~~~ 128 (461)
.||+++.++.+.+++.+.. .+.+.++ +++.+|.+++|+|.+|..
T Consensus 234 ~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~ 282 (476)
T 3lad_A 234 QGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVT 282 (476)
T ss_dssp TTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEECC
T ss_pred CCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCcccC
Confidence 9999999999999986553 3445443 578999999999998853
No 289
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.87 E-value=8.3e-06 Score=82.92 Aligned_cols=54 Identities=15% Similarity=0.135 Sum_probs=45.3
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCC
Q 012545 231 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGG 288 (461)
Q Consensus 231 ~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~ 288 (461)
...+.+.+.+.+++.|++++++++|++|.. ++. .+++.+|+++.||.||+++..
T Consensus 221 ~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~--~~~--~v~~~~G~~~~ad~vI~t~P~ 274 (513)
T 4gde_A 221 TGGIWIAVANTLPKEKTRFGEKGKVTKVNA--NNK--TVTLQDGTTIGYKKLVSTMAV 274 (513)
T ss_dssp HHHHHHHHHHTSCGGGEEESGGGCEEEEET--TTT--EEEETTSCEEEEEEEEECSCH
T ss_pred HHHHHHHHHHHHHhcCeeeecceEEEEEEc--cCC--EEEEcCCCEEECCEEEECCCH
Confidence 356778888888999999999999999987 332 467899999999999998764
No 290
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.85 E-value=2.6e-05 Score=78.74 Aligned_cols=97 Identities=14% Similarity=0.119 Sum_probs=70.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
..+++|||+|+.|+.+|..|++.|.+ |+++++....+. .. .. ......+.+++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~l~~----~d---------~~-----------~~~~l~~~l~~ 239 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYE---PTVMVRSIVLRG----FD---------QQ-----------MAELVAASMEE 239 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSCSSTT----SC---------HH-----------HHHHHHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCE---EEEEeCCCCCcc----cC---------HH-----------HHHHHHHHHHh
Confidence 46899999999999999999999876 999988532110 00 00 01234566788
Q ss_pred cCcEEEcCCeEEEEeCCC-C--EEEcCCCc-----EEecCEEEEccCCCccc
Q 012545 85 KGIELILSTEIVRADIAS-K--TLLSATGL-----IFKYQILVIATGSTVSI 128 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~-~--~v~~~~~~-----~~~~d~liiAtG~~~~~ 128 (461)
.||+++.++.+.+++... . .+.+.++. ++.+|.+++|+|.+|..
T Consensus 240 ~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~ 291 (483)
T 3dgh_A 240 RGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLV 291 (483)
T ss_dssp TTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEECC
T ss_pred CCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccCc
Confidence 999999999999987533 2 35554433 78999999999998853
No 291
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.85 E-value=5.6e-05 Score=74.57 Aligned_cols=101 Identities=19% Similarity=0.217 Sum_probs=75.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCc-EEEEccCCccCCcc----c----------------------------------
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNID-VSMVYPEPWCMPRL----F---------------------------------- 230 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~-Vtli~~~~~~~~~~----~---------------------------------- 230 (461)
..+|+|||+|+.|+.+|..|++.|.+ |+++++.+.+.+.. +
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~g 83 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSG 83 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCCC
Confidence 35799999999999999999999999 99999876431100 0
Q ss_pred ----------------------CHHHHHHHHHHHHh-cC-cEEEcCCcEEEEEecCCCCEEEEEeCC---C--cEEecCE
Q 012545 231 ----------------------TADIAAFYEGYYAN-KG-IKIIKGTVAVGFTTNADGEVKEVKLKD---G--RTLEADI 281 (461)
Q Consensus 231 ----------------------~~~~~~~~~~~l~~-~G-V~v~~~~~v~~i~~~~~g~~~~v~~~~---G--~~i~aD~ 281 (461)
...+.+.+.+.+++ .| ++++++++|++++. +++ ..+++.+ | +++.+|.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~--v~v~~~~~~~g~~~~~~ad~ 160 (410)
T 3c96_A 84 ATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDG--RVLIGARDGHGKPQALGADV 160 (410)
T ss_dssp CEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETT--EEEEEEEETTSCEEEEEESE
T ss_pred CEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCc--cEEEEecCCCCCceEEecCE
Confidence 01344556666665 36 68999999999987 454 3456554 7 5799999
Q ss_pred EEEccCCCCChh
Q 012545 282 VVVGVGGRPLIS 293 (461)
Q Consensus 282 vi~a~G~~p~~~ 293 (461)
||.|.|......
T Consensus 161 vV~AdG~~S~vR 172 (410)
T 3c96_A 161 LVGADGIHSAVR 172 (410)
T ss_dssp EEECCCTTCHHH
T ss_pred EEECCCccchhH
Confidence 999999876553
No 292
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.84 E-value=4e-05 Score=77.60 Aligned_cols=98 Identities=18% Similarity=0.291 Sum_probs=72.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
..+++|||+|+.|+.+|..|++.|.+ |+++++.+.... ... .. ......+.+++
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l~---~~d---------~~-----------~~~~l~~~l~~ 251 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAK---VTVVEFLDTILG---GMD---------GE-----------VAKQLQRMLTK 251 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCE---EEEECSSSSSSS---SSC---------HH-----------HHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCE---EEEEeccccccc---cCC---------HH-----------HHHHHHHHHHh
Confidence 47899999999999999999999876 999998864210 000 00 01234566778
Q ss_pred cCcEEEcCCeEEEEeCCCCE--EEcCC---C--cEEecCEEEEccCCCccc
Q 012545 85 KGIELILSTEIVRADIASKT--LLSAT---G--LIFKYQILVIATGSTVSI 128 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~--v~~~~---~--~~~~~d~liiAtG~~~~~ 128 (461)
.||+++.++.+.+++.+... +.+.+ | +++++|.+|+|+|.+|..
T Consensus 252 ~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~ 302 (491)
T 3urh_A 252 QGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPST 302 (491)
T ss_dssp TTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEECC
T ss_pred CCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCC
Confidence 89999999999998765543 44432 4 579999999999998854
No 293
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.84 E-value=0.00012 Score=74.15 Aligned_cols=101 Identities=23% Similarity=0.390 Sum_probs=78.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCc-----------------------------------------
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR----------------------------------------- 228 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~----------------------------------------- 228 (461)
...|+|||+|+.|+-+|..|++.|.+|+++++.+.....
T Consensus 12 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 91 (499)
T 2qa2_A 12 DASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVDF 91 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEEG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceeccc
Confidence 457999999999999999999999999999986432100
Q ss_pred -----cc-------CHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCc---EEecCEEEEccCCCCCh
Q 012545 229 -----LF-------TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGR---TLEADIVVVGVGGRPLI 292 (461)
Q Consensus 229 -----~~-------~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~---~i~aD~vi~a~G~~p~~ 292 (461)
.. ...+.+.+.+.+++.|++++++++|++++.++++ ..+++.++. ++.+|.||.|.|.+...
T Consensus 92 ~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~--v~v~~~~~~g~~~~~a~~vVgADG~~S~V 168 (499)
T 2qa2_A 92 GVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDH--VVVEVEGPDGPRSLTTRYVVGCDGGRSTV 168 (499)
T ss_dssp GGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSC--EEEEEECSSCEEEEEEEEEEECCCTTCHH
T ss_pred ccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE--EEEEEEcCCCcEEEEeCEEEEccCcccHH
Confidence 00 1245566777788889999999999999985444 357777764 79999999999987543
No 294
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.83 E-value=1.5e-05 Score=79.01 Aligned_cols=53 Identities=23% Similarity=0.243 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCC
Q 012545 233 DIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGG 288 (461)
Q Consensus 233 ~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~ 288 (461)
.+.+.+.+..+..+.+++++++|++|..+ ++.+ .|++.+|+ +.||.||+|++.
T Consensus 204 g~~~l~~~l~~~l~~~v~~~~~V~~i~~~-~~~v-~v~~~~g~-~~ad~Vv~a~~~ 256 (424)
T 2b9w_A 204 GTQAMFEHLNATLEHPAERNVDITRITRE-DGKV-HIHTTDWD-RESDVLVLTVPL 256 (424)
T ss_dssp CHHHHHHHHHHHSSSCCBCSCCEEEEECC-TTCE-EEEESSCE-EEESEEEECSCH
T ss_pred hHHHHHHHHHHhhcceEEcCCEEEEEEEE-CCEE-EEEECCCe-EEcCEEEECCCH
Confidence 34455555556666788999999999874 3444 58888884 999999999985
No 295
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.83 E-value=3.5e-05 Score=77.68 Aligned_cols=98 Identities=16% Similarity=0.180 Sum_probs=71.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
..+++|||+|+.|+.+|..|++.|.+ |+++++.+... +... .. ......+.+++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l---~~~d---------~~-----------~~~~~~~~l~~ 240 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSK---TSLMIRHDKVL---RSFD---------SM-----------ISTNCTEELEN 240 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSC---TTSC---------HH-----------HHHHHHHHHHH
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCe---EEEEEeCCccc---cccC---------HH-----------HHHHHHHHHHH
Confidence 47899999999999999999999876 99999875311 0000 00 01234566788
Q ss_pred cCcEEEcCCeEEEEeCCC-C---EEEcCC-------CcEEecCEEEEccCCCccc
Q 012545 85 KGIELILSTEIVRADIAS-K---TLLSAT-------GLIFKYQILVIATGSTVSI 128 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~-~---~v~~~~-------~~~~~~d~liiAtG~~~~~ 128 (461)
.||+++.++.+.+++... . .+.+.+ ++++.+|.+++|+|.+|..
T Consensus 241 ~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~ 295 (478)
T 3dk9_A 241 AGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNT 295 (478)
T ss_dssp TTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESC
T ss_pred CCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCC
Confidence 999999999999987542 2 244543 2578999999999998854
No 296
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.82 E-value=1.6e-05 Score=78.17 Aligned_cols=38 Identities=16% Similarity=0.291 Sum_probs=34.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHc-CCCCCcEEEEeCCCCC
Q 012545 3 EKSFKYVILGGGVSAGYAAREFAKQ-GVKPGELAIISKEAVA 43 (461)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~L~~~-g~~~~~V~vie~~~~~ 43 (461)
++.+||+|||||++|++||..|++. |++ |+|+|+++..
T Consensus 5 ~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~---v~v~E~~~~~ 43 (399)
T 1v0j_A 5 TARFDLFVVGSGFFGLTIAERVATQLDKR---VLVLERRPHI 43 (399)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHHSCCC---EEEECSSSSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHhCCCC---EEEEeCCCCC
Confidence 3479999999999999999999998 886 9999999754
No 297
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.82 E-value=1e-05 Score=82.52 Aligned_cols=37 Identities=19% Similarity=0.317 Sum_probs=33.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcC-CCCCcEEEEeCCCCC
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQG-VKPGELAIISKEAVA 43 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g-~~~~~V~vie~~~~~ 43 (461)
+.+||+|||||++||+||..|++.| ++ |+|+|+.+..
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~---V~VlEa~~ri 44 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQD---CLVLEARDRV 44 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCS---EEEECSSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCC---EEEEeCCCCC
Confidence 4589999999999999999999999 76 9999999764
No 298
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.79 E-value=6.1e-05 Score=76.15 Aligned_cols=97 Identities=11% Similarity=0.113 Sum_probs=70.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
..+++|||+|+.|+.+|..|++.|.+ |+++++....+. .. .. ......+.+++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~l~~----~d---------~~-----------~~~~l~~~l~~ 237 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLD---TTVMMRSIPLRG----FD---------QQ-----------MSSLVTEHMES 237 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCSSTT----SC---------HH-----------HHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCc---eEEEEcCccccc----CC---------HH-----------HHHHHHHHHHH
Confidence 46899999999999999999999876 999998632110 00 00 01234566788
Q ss_pred cCcEEEcCCeEEEEeCC-CC--EEEcCC---Cc--EEecCEEEEccCCCccc
Q 012545 85 KGIELILSTEIVRADIA-SK--TLLSAT---GL--IFKYQILVIATGSTVSI 128 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~-~~--~v~~~~---~~--~~~~d~liiAtG~~~~~ 128 (461)
.||+++.++.+.++... .. .+.+.+ ++ ++.+|.+++|+|.+|..
T Consensus 238 ~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~ 289 (488)
T 3dgz_A 238 HGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPET 289 (488)
T ss_dssp TTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESC
T ss_pred CCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCccc
Confidence 99999999888888642 22 344433 44 47899999999998854
No 299
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.79 E-value=0.00014 Score=73.74 Aligned_cols=102 Identities=22% Similarity=0.345 Sum_probs=78.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCc----------------------c-----------------
Q 012545 189 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR----------------------L----------------- 229 (461)
Q Consensus 189 ~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~----------------------~----------------- 229 (461)
....|+|||+|+.|+-+|..|++.|.+|+++++.+.+... .
T Consensus 10 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 89 (500)
T 2qa1_A 10 SDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPID 89 (500)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceecc
Confidence 3467999999999999999999999999999986432100 0
Q ss_pred -------------c-CHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCc---EEecCEEEEccCCCCCh
Q 012545 230 -------------F-TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGR---TLEADIVVVGVGGRPLI 292 (461)
Q Consensus 230 -------------~-~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~---~i~aD~vi~a~G~~p~~ 292 (461)
+ ...+.+.+.+.+++.|++++++++|++++.++++ ..+++.++. ++.+|.||.|.|.+...
T Consensus 90 ~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~--v~v~~~~~~g~~~~~a~~vVgADG~~S~V 167 (500)
T 2qa1_A 90 FGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAG--VTVEVRGPEGKHTLRAAYLVGCDGGRSSV 167 (500)
T ss_dssp GGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTE--EEEEEEETTEEEEEEESEEEECCCTTCHH
T ss_pred cccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCe--EEEEEEcCCCCEEEEeCEEEECCCcchHH
Confidence 0 0244566777788889999999999999874443 357776664 79999999999987543
No 300
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.76 E-value=3.2e-05 Score=78.33 Aligned_cols=99 Identities=19% Similarity=0.288 Sum_probs=70.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcc---------c---CHHHHHHHHHHHHhcCcEEEcCCcEEEE
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRL---------F---TADIAAFYEGYYANKGIKIIKGTVAVGF 258 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~---------~---~~~~~~~~~~~l~~~GV~v~~~~~v~~i 258 (461)
.+|+|||+|+.|+.+|..|++. .+|+++++.+.+.... + ..++...+.+.+ +.|++++.++++.++
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~~~~v~~i 186 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYLETSALGV 186 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEETTEEECCC
T ss_pred CCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEcCCEEEEE
Confidence 4799999999999999999999 9999999987652110 1 223333444444 669999999999888
Q ss_pred EecCCCCEEEEEeCCCc--EEecCEEEEccCCCCCh
Q 012545 259 TTNADGEVKEVKLKDGR--TLEADIVVVGVGGRPLI 292 (461)
Q Consensus 259 ~~~~~g~~~~v~~~~G~--~i~aD~vi~a~G~~p~~ 292 (461)
..+ +........++++ ++.+|.+|+|+|..|..
T Consensus 187 ~~~-~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~ 221 (493)
T 1y56_A 187 FDK-GEYFLVPVVRGDKLIEILAKRVVLATGAIDST 221 (493)
T ss_dssp EEC-SSSEEEEEEETTEEEEEEESCEEECCCEEECC
T ss_pred EcC-CcEEEEEEecCCeEEEEECCEEEECCCCCccC
Confidence 762 3332222224554 68999999999987754
No 301
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.75 E-value=2.1e-05 Score=79.56 Aligned_cols=39 Identities=28% Similarity=0.439 Sum_probs=34.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 012545 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (461)
Q Consensus 2 m~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~ 43 (461)
+.+.+||+|||||++||+||..|++.|++ |+|+|+.+..
T Consensus 8 ~~~~~~v~IIGaG~aGl~aA~~L~~~g~~---v~v~E~~~~~ 46 (489)
T 2jae_A 8 VKGSHSVVVLGGGPAGLCSAFELQKAGYK---VTVLEARTRP 46 (489)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSS
T ss_pred ccCCCCEEEECCCHHHHHHHHHHHHCCCC---EEEEeccCCC
Confidence 34578999999999999999999999986 9999999764
No 302
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.75 E-value=1.6e-05 Score=79.01 Aligned_cols=34 Identities=12% Similarity=0.179 Sum_probs=31.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
++||+|||||++|+++|..|++.|++ |+|+|+.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~---V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVD---VTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCE---EEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCe---EEEEcCCC
Confidence 47999999999999999999999987 99999986
No 303
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.73 E-value=5.1e-05 Score=74.72 Aligned_cols=54 Identities=17% Similarity=0.217 Sum_probs=39.2
Q ss_pred HHHHHHHHHHhcCcEEEcCCcEE---------EEEecCCCCEEEEEeCCCcEEecCEEEEccCCCC
Q 012545 234 IAAFYEGYYANKGIKIIKGTVAV---------GFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRP 290 (461)
Q Consensus 234 ~~~~~~~~l~~~GV~v~~~~~v~---------~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p 290 (461)
+.+.+.+.+++.|++++.+++|+ ++..+ ++.+ .|++.+| ++.||.||+|+|...
T Consensus 174 l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~-~~~v-~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 174 LALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVT-NTHQ-IVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC---------CBCCE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEeccccccccceEee-CCeE-EEEECCc-EEECCEEEECCCccH
Confidence 55566777888999999999999 87652 3444 6777776 899999999999764
No 304
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.73 E-value=3e-05 Score=75.86 Aligned_cols=37 Identities=27% Similarity=0.582 Sum_probs=33.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~ 43 (461)
..+||+|||||++|+++|..|++.|.+ |+|+|+.+..
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~---v~v~E~~~~~ 64 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQR---VLIVDRRPHI 64 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCc---eEEEeccCCC
Confidence 468999999999999999999999887 9999998653
No 305
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.72 E-value=2.7e-05 Score=75.50 Aligned_cols=37 Identities=16% Similarity=0.324 Sum_probs=33.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCC-CC
Q 012545 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-AV 42 (461)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~-~~ 42 (461)
...+||+|||||++||+||..|++.|++ |+|+|++ +.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~---V~VlE~~~~~ 79 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHD---VTILEANANR 79 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCE---EEEECSCSSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCc---EEEEeccccc
Confidence 3468999999999999999999999986 9999998 65
No 306
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.71 E-value=2e-05 Score=79.28 Aligned_cols=55 Identities=24% Similarity=0.434 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCC
Q 012545 232 ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGG 288 (461)
Q Consensus 232 ~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~ 288 (461)
..+.+.+.+.+++.|++++++++|++|..++++ ...|++ ++.++.||.||+|++.
T Consensus 234 ~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~-~~~v~~-~~~~~~ad~vv~a~p~ 288 (477)
T 3nks_A 234 EMLPQALETHLTSRGVSVLRGQPVCGLSLQAEG-RWKVSL-RDSSLEADHVISAIPA 288 (477)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEECGGG-CEEEEC-SSCEEEESEEEECSCH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCc-eEEEEE-CCeEEEcCEEEECCCH
Confidence 467888889999999999999999999874333 245665 4558999999999984
No 307
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.68 E-value=0.00029 Score=71.40 Aligned_cols=55 Identities=16% Similarity=0.140 Sum_probs=43.3
Q ss_pred HHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEe---CCCc--EEecCEEEEccCCCC
Q 012545 234 IAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKL---KDGR--TLEADIVVVGVGGRP 290 (461)
Q Consensus 234 ~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~---~~G~--~i~aD~vi~a~G~~p 290 (461)
+...+.+.+++.|++++.+++|+++..+ +.+..|++ .+|+ ++.+|.||.|+|...
T Consensus 151 l~~~l~~~a~~~Gv~i~~~~~V~~l~~~--~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 151 LVLANAQMVVRKGGEVLTRTRATSARRE--NGLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEEE--TTEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHcCCEEEcCcEEEEEEEe--CCEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 4456667778899999999999999873 35567777 3675 799999999999764
No 308
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.68 E-value=0.00012 Score=80.04 Aligned_cols=101 Identities=15% Similarity=0.112 Sum_probs=72.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcc-------c----CHHHHHHHHHHHHhc-CcEEEcCCcEEE
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRL-------F----TADIAAFYEGYYANK-GIKIIKGTVAVG 257 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~-------~----~~~~~~~~~~~l~~~-GV~v~~~~~v~~ 257 (461)
..+|+|||+|+.|+.+|..+++.|.+|+++++.+.+.... + ..++...+.+.+.+. +++++.+++|.+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~ 207 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTTVFG 207 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCEEEe
Confidence 3579999999999999999999999999999876542111 1 234445555666664 999999999988
Q ss_pred EEecCCCCEEEEEe---------------CCCcEEecCEEEEccCCCCCh
Q 012545 258 FTTNADGEVKEVKL---------------KDGRTLEADIVVVGVGGRPLI 292 (461)
Q Consensus 258 i~~~~~g~~~~v~~---------------~~G~~i~aD~vi~a~G~~p~~ 292 (461)
+.. ++.+..+.. .++.++.+|.+|+|||.+|..
T Consensus 208 i~~--~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~ 255 (965)
T 2gag_A 208 SYD--ANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERP 255 (965)
T ss_dssp EET--TTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECC
T ss_pred eec--CCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCC
Confidence 864 332222211 112368999999999987654
No 309
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.68 E-value=3.8e-05 Score=77.55 Aligned_cols=37 Identities=22% Similarity=0.216 Sum_probs=33.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcC-CCCCcEEEEeCCCCC
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQG-VKPGELAIISKEAVA 43 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g-~~~~~V~vie~~~~~ 43 (461)
+.+||+|||||++|++||..|++.| .+ |+|+|+++..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~---v~v~E~~~~~ 45 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKN---WHLYECNDTP 45 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCS---EEEEESSSSS
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCC---EEEEeCCCCC
Confidence 4689999999999999999999998 45 9999999753
No 310
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.67 E-value=0.0003 Score=71.73 Aligned_cols=56 Identities=13% Similarity=0.310 Sum_probs=44.4
Q ss_pred HHHHHHHHh-cCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCCh
Q 012545 236 AFYEGYYAN-KGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 292 (461)
Q Consensus 236 ~~~~~~l~~-~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~~ 292 (461)
+.+.+.+++ .|++++.+ +|+++..++++.+..|++.+|.++.+|.||.|.|.....
T Consensus 179 ~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~ 235 (526)
T 2pyx_A 179 QLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLL 235 (526)
T ss_dssp HHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCC
T ss_pred HHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHH
Confidence 344555666 89999999 699998755666678888888789999999999986543
No 311
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.64 E-value=1.7e-05 Score=79.52 Aligned_cols=91 Identities=13% Similarity=0.122 Sum_probs=69.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCC--CcEEEEccCCccC--------Ccc-cCHHHHHHHHHHHHhcCcEEEcCCcEEE
Q 012545 189 KNGKAVVVGGGYIGLELSAALKINN--IDVSMVYPEPWCM--------PRL-FTADIAAFYEGYYANKGIKIIKGTVAVG 257 (461)
Q Consensus 189 ~~~~v~VvG~G~~g~e~a~~l~~~g--~~Vtli~~~~~~~--------~~~-~~~~~~~~~~~~l~~~GV~v~~~~~v~~ 257 (461)
.+.+|+|||+|+.|+.+|..|.+.| .+|+++++.+.+. +.. ...++...+.+.+++.||+++.++.+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~- 83 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVG- 83 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCBT-
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeEEe-
Confidence 3578999999999999999999988 9999999987654 211 123566777888889999999987652
Q ss_pred EEecCCCCEEEEEeCCCcEEecCEEEEccCCCC
Q 012545 258 FTTNADGEVKEVKLKDGRTLEADIVVVGVGGRP 290 (461)
Q Consensus 258 i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p 290 (461)
. .|.+.+. ++.+|.||+|||..|
T Consensus 84 -----~----~V~~~~~-~~~~d~lVlAtGs~~ 106 (460)
T 1cjc_A 84 -----R----DVTVQEL-QDAYHAVVLSYGAED 106 (460)
T ss_dssp -----T----TBCHHHH-HHHSSEEEECCCCCE
T ss_pred -----e----EEEeccc-eEEcCEEEEecCcCC
Confidence 1 1333332 478999999999875
No 312
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.63 E-value=0.00016 Score=73.67 Aligned_cols=97 Identities=15% Similarity=0.196 Sum_probs=66.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
..+++|||+|+.|+.+|..|++.|.+ |+++++....+. .. .. ......+.+++
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~---Vtlv~~~~~l~~----~d---------~~-----------~~~~~~~~l~~ 262 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLD---VTVMVRSILLRG----FD---------QD-----------MANKIGEHMEE 262 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCSSTT----SC---------HH-----------HHHHHHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCe---EEEEeccccccc----CC---------HH-----------HHHHHHHHHHH
Confidence 46799999999999999999999876 999998532110 00 00 01234566788
Q ss_pred cCcEEEcCCeEEEEeCCC----C--EEE--cCCC-c--EEecCEEEEccCCCccc
Q 012545 85 KGIELILSTEIVRADIAS----K--TLL--SATG-L--IFKYQILVIATGSTVSI 128 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~----~--~v~--~~~~-~--~~~~d~liiAtG~~~~~ 128 (461)
.||+++.++.+..+.... . .+. ..++ + ++.+|.+++|+|.+|+.
T Consensus 263 ~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~ 317 (519)
T 3qfa_A 263 HGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACT 317 (519)
T ss_dssp TTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESC
T ss_pred CCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccC
Confidence 999999997766664311 2 222 2344 2 56899999999998854
No 313
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.62 E-value=3.4e-05 Score=78.33 Aligned_cols=37 Identities=24% Similarity=0.397 Sum_probs=33.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~ 43 (461)
+.+||+|||||++||+||..|++.|++ |+|+|+.+..
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~---v~v~E~~~~~ 48 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLN---VTVFEAEGKA 48 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCE---EEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCc---EEEEEeCCCC
Confidence 468999999999999999999999986 9999999764
No 314
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.62 E-value=2.5e-05 Score=86.04 Aligned_cols=94 Identities=18% Similarity=0.286 Sum_probs=72.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEccCCccCC-------c-ccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEe
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNI-DVSMVYPEPWCMP-------R-LFTADIAAFYEGYYANKGIKIIKGTVAVGFTT 260 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~-~Vtli~~~~~~~~-------~-~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~ 260 (461)
.++|+|||+|+.|+.+|..|++.|. +|+++++.+.+.. . .++.+..++..+.+++.||+++.++.+..
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~--- 263 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSE--- 263 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTTTCEEEESCCBST---
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHCCcEEEcccEecc---
Confidence 4689999999999999999999999 7999999765421 1 13556677777889999999999877631
Q ss_pred cCCCCEEEEEeCCCcEEecCEEEEccCC-CCCh
Q 012545 261 NADGEVKEVKLKDGRTLEADIVVVGVGG-RPLI 292 (461)
Q Consensus 261 ~~~g~~~~v~~~~G~~i~aD~vi~a~G~-~p~~ 292 (461)
. .+++++++++.+|.||+|+|. +|..
T Consensus 264 --~----~v~~~~~~~~~~d~vvlAtGa~~p~~ 290 (1025)
T 1gte_A 264 --N----EITLNTLKEEGYKAAFIGIGLPEPKT 290 (1025)
T ss_dssp --T----SBCHHHHHHTTCCEEEECCCCCEECC
T ss_pred --c----eEEhhhcCccCCCEEEEecCCCCCCC
Confidence 1 234445556789999999997 4654
No 315
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.61 E-value=0.00036 Score=70.13 Aligned_cols=99 Identities=21% Similarity=0.300 Sum_probs=71.6
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCC-------------c------------------------------
Q 012545 192 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP-------------R------------------------------ 228 (461)
Q Consensus 192 ~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~-------------~------------------------------ 228 (461)
.|+|||+|..|+-+|..+++.|.+|+++++...-.. .
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~~ 80 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKRIDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTSE 80 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHHH
Confidence 379999999999999999999999999988621000 0
Q ss_pred -----------------------------------ccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeC-
Q 012545 229 -----------------------------------LFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK- 272 (461)
Q Consensus 229 -----------------------------------~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~- 272 (461)
.....+.+.+.+.+++.||+++.++++ ++.. +++++.++...
T Consensus 81 ~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~-~~~~v~Gv~v~~ 158 (472)
T 2e5v_A 81 AKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRV-KDGKVTGFVTEK 158 (472)
T ss_dssp HHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEE-ETTEEEEEEETT
T ss_pred HHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEE-eCCEEEEEEEEe
Confidence 001133445566667789999999999 9976 35666566553
Q ss_pred CCcEEecCEEEEccCCCCCh
Q 012545 273 DGRTLEADIVVVGVGGRPLI 292 (461)
Q Consensus 273 ~G~~i~aD~vi~a~G~~p~~ 292 (461)
++.++.+|.||+|+|..+..
T Consensus 159 ~~g~~~a~~VVlAtGg~~~~ 178 (472)
T 2e5v_A 159 RGLVEDVDKLVLATGGYSYL 178 (472)
T ss_dssp TEEECCCSEEEECCCCCGGG
T ss_pred CCCeEEeeeEEECCCCCccc
Confidence 22357899999999976643
No 316
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.61 E-value=4.1e-05 Score=77.05 Aligned_cols=36 Identities=22% Similarity=0.296 Sum_probs=32.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcC--CCCCcEEEEeCCCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQG--VKPGELAIISKEAVA 43 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g--~~~~~V~vie~~~~~ 43 (461)
++||+|||||++|++||.+|++.| .+ |+|+|+++..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~---v~v~E~~~~~ 41 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLN---ITLLEAGERL 41 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSE---EEEECSSSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCC---EEEEECCCCC
Confidence 689999999999999999999998 55 9999998653
No 317
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.60 E-value=9.7e-05 Score=77.98 Aligned_cols=97 Identities=14% Similarity=0.124 Sum_probs=72.2
Q ss_pred CCeEEEEc--CChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHH
Q 012545 5 SFKYVILG--GGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY 82 (461)
Q Consensus 5 ~~dvvIIG--~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (461)
..+|+||| +|..|+.+|..|++.|.+ |+++++.+... ..... .. ....+.+.+
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~---Vtlv~~~~~l~-------~~~~~----~~-----------~~~~l~~~l 577 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYE---VSIVTPGAQVS-------SWTNN----TF-----------EVNRIQRRL 577 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCE---EEEEESSSSTT-------GGGGG----GT-----------CHHHHHHHH
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCe---eEEEecccccc-------ccccc----ch-----------hHHHHHHHH
Confidence 45799999 999999999999999876 99999885421 00000 00 012345677
Q ss_pred HHcCcEEEcCCeEEEEeCCCCEEEc---CCCcEEecCEEEEccCCCc
Q 012545 83 KEKGIELILSTEIVRADIASKTLLS---ATGLIFKYQILVIATGSTV 126 (461)
Q Consensus 83 ~~~~v~~~~~~~v~~i~~~~~~v~~---~~~~~~~~d~liiAtG~~~ 126 (461)
++.||+++.++.|.+++.+...+.. .+++++++|.+|+|+|.+|
T Consensus 578 ~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~~~~i~aD~VV~A~G~~p 624 (690)
T 3k30_A 578 IENGVARVTDHAVVAVGAGGVTVRDTYASIERELECDAVVMVTARLP 624 (690)
T ss_dssp HHTTCEEEESEEEEEEETTEEEEEETTTCCEEEEECSEEEEESCEEE
T ss_pred HHCCCEEEcCcEEEEEECCeEEEEEccCCeEEEEECCEEEECCCCCC
Confidence 8899999999999999876544442 2456799999999999988
No 318
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.58 E-value=3.7e-05 Score=74.09 Aligned_cols=33 Identities=15% Similarity=0.259 Sum_probs=30.3
Q ss_pred CeEEEEcCChHHHHHHHHHHHcC------CCCCcEEEEeCCC
Q 012545 6 FKYVILGGGVSAGYAAREFAKQG------VKPGELAIISKEA 41 (461)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~L~~~g------~~~~~V~vie~~~ 41 (461)
+||+|||||++|+++|++|+++| .+ |+|+|++.
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~---V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLD---IKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCE---EEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCce---EEEEECCC
Confidence 49999999999999999999997 55 99999986
No 319
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.57 E-value=4.8e-05 Score=74.27 Aligned_cols=35 Identities=17% Similarity=0.272 Sum_probs=31.7
Q ss_pred CeEEEEcCChHHHHHHHHHHHc--CCCCCcEEEEeCCCCC
Q 012545 6 FKYVILGGGVSAGYAAREFAKQ--GVKPGELAIISKEAVA 43 (461)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~L~~~--g~~~~~V~vie~~~~~ 43 (461)
+||+|||||++|+++|..|++. |++ |+|+|+.+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~---V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWA---IDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSE---EEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCC---EEEEECCCCC
Confidence 4899999999999999999999 876 9999998653
No 320
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.56 E-value=3.5e-05 Score=79.40 Aligned_cols=58 Identities=21% Similarity=0.248 Sum_probs=45.7
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeC---CCc--EEecCEEEEccCCC
Q 012545 231 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK---DGR--TLEADIVVVGVGGR 289 (461)
Q Consensus 231 ~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~---~G~--~i~aD~vi~a~G~~ 289 (461)
+..+...+.+.+++.|++++.+++|+++.. +++.+..|++. +|+ ++.||.||+|+|..
T Consensus 187 ~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~-~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~w 249 (571)
T 2rgh_A 187 DARLVIDNIKKAAEDGAYLVSKMKAVGFLY-EGDQIVGVKARDLLTDEVIEIKAKLVINTSGPW 249 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEBSCEEECCGGG
T ss_pred hHHHHHHHHHHHHHcCCeEEeccEEEEEEE-eCCEEEEEEEEEcCCCCEEEEEcCEEEECCChh
Confidence 556777777888899999999999999987 34555667653 343 79999999999954
No 321
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.53 E-value=8e-05 Score=74.03 Aligned_cols=59 Identities=14% Similarity=0.137 Sum_probs=48.7
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCC
Q 012545 231 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPL 291 (461)
Q Consensus 231 ~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~ 291 (461)
...+.+.+.+.+++.|++++++++|++|.. +++++..|. .+|+++.||.||+|+|..+.
T Consensus 233 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~-~~~~v~~v~-~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 233 LGELPQGFARLSAIYGGTYMLNKPVDDIIM-ENGKVVGVK-SEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp TTHHHHHHHHHHHHHTCCCBCSCCCCEEEE-ETTEEEEEE-ETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEE-eCCEEEEEE-ECCeEEECCEEEECCCCCcc
Confidence 457888888889999999999999999987 355555565 47889999999999998764
No 322
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.52 E-value=0.00032 Score=72.80 Aligned_cols=97 Identities=11% Similarity=0.217 Sum_probs=67.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHHH
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (461)
..+++|||||..|+.+|..|++.|.+ |+++++....+ .... .+ .....+.+++
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~l~----~~d~---------~~-----------~~~~~~~l~~ 338 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGD---VTVMVRSILLR----GFDQ---------QM-----------AEKVGDYMEN 338 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCSST----TSCH---------HH-----------HHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCE---EEEEECCcCcC----cCCH---------HH-----------HHHHHHHHHh
Confidence 46899999999999999999999876 99999872111 0000 00 1233456778
Q ss_pred cCcEEEcCCeEEEEeC------CC---CE--EE--cCCCcEEe--cCEEEEccCCCccc
Q 012545 85 KGIELILSTEIVRADI------AS---KT--LL--SATGLIFK--YQILVIATGSTVSI 128 (461)
Q Consensus 85 ~~v~~~~~~~v~~i~~------~~---~~--v~--~~~~~~~~--~d~liiAtG~~~~~ 128 (461)
.||+++.++.+..+.. +. .. +. ..+|+++. +|.+++|+|.+|+.
T Consensus 339 ~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~ 397 (598)
T 2x8g_A 339 HGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQL 397 (598)
T ss_dssp TTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECG
T ss_pred CCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCcccc
Confidence 8999999987776632 11 22 22 34666554 99999999998853
No 323
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.51 E-value=1.8e-05 Score=79.16 Aligned_cols=89 Identities=18% Similarity=0.153 Sum_probs=68.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHH-C------CCcEEEEccCCccCC--------c-ccCHHHHHHHHHHHHhcCcEEEcCC
Q 012545 190 NGKAVVVGGGYIGLELSAALKI-N------NIDVSMVYPEPWCMP--------R-LFTADIAAFYEGYYANKGIKIIKGT 253 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~-~------g~~Vtli~~~~~~~~--------~-~~~~~~~~~~~~~l~~~GV~v~~~~ 253 (461)
+.+|+|||+|+.|+.+|..|.+ . +.+|+++++.+.+.. . ....++...+.+.+++.|++++.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~~v 82 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNV 82 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEESC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCCCEEEeeE
Confidence 5689999999999999999999 7 999999999876532 1 1234566777788888999999885
Q ss_pred cEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCC
Q 012545 254 VAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGR 289 (461)
Q Consensus 254 ~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~ 289 (461)
.+ +. .|+++++ ++.+|.||+|+|..
T Consensus 83 ~v-------~~---~v~~~~~-~~~~d~lViAtG~~ 107 (456)
T 1lqt_A 83 VV-------GE---HVQPGEL-SERYDAVIYAVGAQ 107 (456)
T ss_dssp CB-------TT---TBCHHHH-HHHSSEEEECCCCC
T ss_pred EE-------CC---EEEECCC-eEeCCEEEEeeCCC
Confidence 43 11 2444455 57899999999986
No 324
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.50 E-value=6.8e-05 Score=75.46 Aligned_cols=37 Identities=19% Similarity=0.394 Sum_probs=32.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~ 43 (461)
..+||+|||||++|++||..|++.|++ |+|+|+++..
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~---v~v~E~~~~~ 51 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTD---AVLLESSARL 51 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCC---EEEECSSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCC---EEEEEcCCCC
Confidence 368999999999999999999999987 9999999753
No 325
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.50 E-value=0.00011 Score=77.28 Aligned_cols=87 Identities=15% Similarity=0.205 Sum_probs=66.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcc-----c-----CHHHHHHHHHHHHhcCcEEEcCCcEEEEE
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRL-----F-----TADIAAFYEGYYANKGIKIIKGTVAVGFT 259 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~-----~-----~~~~~~~~~~~l~~~GV~v~~~~~v~~i~ 259 (461)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.... + ..+..+.+.+.+++.||+++.++.++.
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~-- 450 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVTA-- 450 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCCS--
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcEecH--
Confidence 5789999999999999999999999999999876542110 1 123445667788889999998876432
Q ss_pred ecCCCCEEEEEeCCCcEE-ecCEEEEccCCCCChh
Q 012545 260 TNADGEVKEVKLKDGRTL-EADIVVVGVGGRPLIS 293 (461)
Q Consensus 260 ~~~~g~~~~v~~~~G~~i-~aD~vi~a~G~~p~~~ 293 (461)
..+ .+|.||+|||.+|...
T Consensus 451 ---------------~~~~~~d~lviAtG~~p~~~ 470 (671)
T 1ps9_A 451 ---------------DQLQAFDETILASGIVPRTP 470 (671)
T ss_dssp ---------------SSSCCSSEEEECCCEEECCC
T ss_pred ---------------HHhhcCCEEEEccCCCcCCC
Confidence 123 8999999999887654
No 326
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.49 E-value=7.9e-05 Score=75.47 Aligned_cols=37 Identities=22% Similarity=0.309 Sum_probs=33.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~ 43 (461)
..+||+|||||++|++||..|++.|.+ |+|+|+.+..
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~---v~vlE~~~~~ 68 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQ---VTVLEASERP 68 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCE---EEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCe---EEEEECCCCC
Confidence 468999999999999999999999986 9999998653
No 327
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.48 E-value=7.7e-05 Score=72.88 Aligned_cols=36 Identities=31% Similarity=0.487 Sum_probs=32.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~ 43 (461)
.+||+|||||++|+++|..|++.|++ |+|+|+++..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~---v~v~E~~~~~ 38 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQ---VHIIDQRDHI 38 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCE---EEEEESSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCc---EEEEEecCCc
Confidence 58999999999999999999998876 9999998753
No 328
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.48 E-value=9.6e-05 Score=71.11 Aligned_cols=33 Identities=18% Similarity=0.346 Sum_probs=31.3
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
+||+|||||+||+.||..|++.|.+ |+|+|+.+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~---V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVP---VRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCC---EEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCc---EEEEeccC
Confidence 6999999999999999999999987 99999986
No 329
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.47 E-value=7.9e-05 Score=75.40 Aligned_cols=56 Identities=21% Similarity=0.234 Sum_probs=47.4
Q ss_pred CHHHHHHHHHHHHhcC-cEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCC
Q 012545 231 TADIAAFYEGYYANKG-IKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGG 288 (461)
Q Consensus 231 ~~~~~~~~~~~l~~~G-V~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~ 288 (461)
...+.+.+.+.+++.| ++++++++|++|...+++ ..|++.+|+++.||.||+|+|.
T Consensus 254 ~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~--v~v~~~~g~~~~ad~vI~a~~~ 310 (495)
T 2vvm_A 254 QSAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDA--ARVTARDGREFVAKRVVCTIPL 310 (495)
T ss_dssp HHHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSS--EEEEETTCCEEEEEEEEECCCG
T ss_pred HHHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCE--EEEEECCCCEEEcCEEEECCCH
Confidence 4567888888899998 999999999999874333 4688889989999999999995
No 330
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.45 E-value=8.7e-05 Score=72.06 Aligned_cols=35 Identities=29% Similarity=0.525 Sum_probs=32.1
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 012545 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (461)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~ 43 (461)
+||+|||||++|+++|..|++.|++ |+|+|+++..
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~---v~v~E~~~~~ 36 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKK---VLVIEKRNHI 36 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCC---EEEECSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCc---EEEEecCCCC
Confidence 6999999999999999999999887 9999998653
No 331
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.37 E-value=0.00084 Score=70.12 Aligned_cols=101 Identities=23% Similarity=0.233 Sum_probs=74.9
Q ss_pred CcEEEECCCHHHHHHHHHHHH-CCCcEEEEccCCccCC------------------------------------------
Q 012545 191 GKAVVVGGGYIGLELSAALKI-NNIDVSMVYPEPWCMP------------------------------------------ 227 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~-~g~~Vtli~~~~~~~~------------------------------------------ 227 (461)
..|+|||+|+.|+-+|..|++ .|.+|+++++.+....
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 112 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPDPG 112 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEECTT
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCCCC
Confidence 369999999999999999999 9999999997643210
Q ss_pred --c---------------------ccC-HHHHHHHHHHHHhcCc--EEEcCCcEEEEEecCC--CCEEEEEeC------C
Q 012545 228 --R---------------------LFT-ADIAAFYEGYYANKGI--KIIKGTVAVGFTTNAD--GEVKEVKLK------D 273 (461)
Q Consensus 228 --~---------------------~~~-~~~~~~~~~~l~~~GV--~v~~~~~v~~i~~~~~--g~~~~v~~~------~ 273 (461)
. .++ ..+.+.+.+.+++.|+ +++++++|++++.+++ +....|++. +
T Consensus 113 ~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~ 192 (639)
T 2dkh_A 113 QPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHA 192 (639)
T ss_dssp STTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGT
T ss_pred CCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCC
Confidence 0 000 2455667788888877 9999999999987442 222345554 5
Q ss_pred C--cEEecCEEEEccCCCCC
Q 012545 274 G--RTLEADIVVVGVGGRPL 291 (461)
Q Consensus 274 G--~~i~aD~vi~a~G~~p~ 291 (461)
| +++.+|.||.|.|.+..
T Consensus 193 G~~~~i~a~~vVgADG~~S~ 212 (639)
T 2dkh_A 193 GQIETVQARYVVGCDGARSN 212 (639)
T ss_dssp TCEEEEEEEEEEECCCTTCH
T ss_pred CCeEEEEeCEEEECCCcchH
Confidence 6 57999999999997543
No 332
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.29 E-value=0.0012 Score=68.24 Aligned_cols=97 Identities=19% Similarity=0.222 Sum_probs=71.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHCC--CcEEEEccCCccCC-------c------------------------cc-------
Q 012545 191 GKAVVVGGGYIGLELSAALKINN--IDVSMVYPEPWCMP-------R------------------------LF------- 230 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g--~~Vtli~~~~~~~~-------~------------------------~~------- 230 (461)
-.|+|||+|..|+-+|..|++.| .+|+++++.+.... . ..
T Consensus 6 ~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v~~ 85 (602)
T 1kf6_A 6 ADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVDY 85 (602)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHHHH
Confidence 36999999999999999999999 99999988642100 0 00
Q ss_pred -----------------------------------------------CHHHHHHHHHHHHhcC-cEEEcCCcEEEEEecC
Q 012545 231 -----------------------------------------------TADIAAFYEGYYANKG-IKIIKGTVAVGFTTNA 262 (461)
Q Consensus 231 -----------------------------------------------~~~~~~~~~~~l~~~G-V~v~~~~~v~~i~~~~ 262 (461)
...+...+.+.+++.| |+++.++.++++.. +
T Consensus 86 ~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~-~ 164 (602)
T 1kf6_A 86 FVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILV-D 164 (602)
T ss_dssp HHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEEE-E
T ss_pred HHHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEEE-e
Confidence 0123344455566678 99999999999987 3
Q ss_pred CCCEEEEEe---CCCc--EEecCEEEEccCC
Q 012545 263 DGEVKEVKL---KDGR--TLEADIVVVGVGG 288 (461)
Q Consensus 263 ~g~~~~v~~---~~G~--~i~aD~vi~a~G~ 288 (461)
++++.++.. .+|+ ++.++.||+|+|.
T Consensus 165 ~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 195 (602)
T 1kf6_A 165 DGHVRGLVAMNMMEGTLVQIRANAVVMATGG 195 (602)
T ss_dssp TTEEEEEEEEETTTTEEEEEECSCEEECCCC
T ss_pred CCEEEEEEEEEcCCCcEEEEEcCeEEECCCC
Confidence 566655543 5776 6899999999996
No 333
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.22 E-value=0.0016 Score=66.60 Aligned_cols=96 Identities=17% Similarity=0.256 Sum_probs=69.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCc------------------------------------------
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR------------------------------------------ 228 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~------------------------------------------ 228 (461)
..|+|||+|+.|+-+|..|++.|.+|+++++.+.....
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 106 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTRV 106 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESSB
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEeccC
Confidence 36999999999999999999999999999986432100
Q ss_pred ---c---c---------------------C-HHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCC---C--c
Q 012545 229 ---L---F---------------------T-ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKD---G--R 275 (461)
Q Consensus 229 ---~---~---------------------~-~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~---G--~ 275 (461)
. + + ..+.+.+.+.+++. ++++++|++++.++++ ..+++.+ | .
T Consensus 107 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~--v~v~~~~~~~G~~~ 181 (549)
T 2r0c_A 107 GGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDDH--VRATITDLRTGATR 181 (549)
T ss_dssp TSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECSSC--EEEEEEETTTCCEE
T ss_pred CCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCCE--EEEEEEECCCCCEE
Confidence 0 0 0 12334555555555 8889999999875444 2355544 6 4
Q ss_pred EEecCEEEEccCCCCC
Q 012545 276 TLEADIVVVGVGGRPL 291 (461)
Q Consensus 276 ~i~aD~vi~a~G~~p~ 291 (461)
++.+|.||.|.|.+..
T Consensus 182 ~i~a~~vVgADG~~S~ 197 (549)
T 2r0c_A 182 AVHARYLVACDGASSP 197 (549)
T ss_dssp EEEEEEEEECCCTTCH
T ss_pred EEEeCEEEECCCCCcH
Confidence 7999999999997654
No 334
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.22 E-value=0.00022 Score=74.52 Aligned_cols=35 Identities=43% Similarity=0.582 Sum_probs=31.7
Q ss_pred CCeEEEEcCChHHHHHHHHHH---H-cCCCCCcEEEEeCCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFA---K-QGVKPGELAIISKEAV 42 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~---~-~g~~~~~V~vie~~~~ 42 (461)
.+||||||||+||++||.+|+ + .|.+ |+|+||...
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~---V~vlEK~~~ 60 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLK---VTLVEKAAV 60 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCC---EEEECSSCT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCe---EEEEeCcCC
Confidence 479999999999999999999 5 7877 999999864
No 335
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.20 E-value=0.00019 Score=69.96 Aligned_cols=87 Identities=18% Similarity=0.162 Sum_probs=68.2
Q ss_pred cEEEECCCHHHHHHHHHHHHC--CCcEEEEccCCcc----------------------C-Cc------------------
Q 012545 192 KAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWC----------------------M-PR------------------ 228 (461)
Q Consensus 192 ~v~VvG~G~~g~e~a~~l~~~--g~~Vtli~~~~~~----------------------~-~~------------------ 228 (461)
+|+|||+|+.|+.+|..|++. |.+|+++++.+.+ . ..
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 81 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHHN 81 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEESS
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeCC
Confidence 689999999999999999999 9999999987543 0 00
Q ss_pred -------------ccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCCCC
Q 012545 229 -------------LFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPL 291 (461)
Q Consensus 229 -------------~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~ 291 (461)
....++.+.+.+.+++.|++++++++|++++. . +++.+|.||.|.|....
T Consensus 82 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~-----------~~~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 82 EPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGE--L-----------PLADYDLVVLANGVNHK 144 (381)
T ss_dssp SEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGG--C-----------CGGGCSEEEECCGGGGG
T ss_pred eeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchh--c-----------ccccCCEEEECCCCCch
Confidence 01145667778888888999999999988753 1 13589999999997653
No 336
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.20 E-value=0.0019 Score=66.36 Aligned_cols=34 Identities=15% Similarity=0.347 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCC
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEP 223 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~ 223 (461)
...|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~ 65 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQD 65 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4589999999999999999999999999999864
No 337
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.17 E-value=0.0011 Score=67.71 Aligned_cols=33 Identities=24% Similarity=0.377 Sum_probs=30.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCc
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW 224 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~ 224 (461)
-.|+|||+|..|+-+|..+++ |.+|+++++.+.
T Consensus 9 ~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~ 41 (540)
T 1chu_A 9 CDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPV 41 (540)
T ss_dssp CSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCT
T ss_pred CCEEEECccHHHHHHHHHHhc-CCcEEEEECCCC
Confidence 469999999999999999999 999999998764
No 338
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.17 E-value=0.0003 Score=70.62 Aligned_cols=54 Identities=20% Similarity=0.289 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHhc--------CcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCC
Q 012545 233 DIAAFYEGYYANK--------GIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGG 288 (461)
Q Consensus 233 ~~~~~~~~~l~~~--------GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~ 288 (461)
.+.+.+.+.+.+. |++++++++|++|...+++ ..|++.+|+++.||.||+|++.
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~--v~v~~~~g~~~~ad~vI~a~~~ 268 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGG--VTVKTEDNSVYSADYVMVSASL 268 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSC--EEEEETTSCEEEESEEEECSCH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCc--EEEEECCCCEEEcCEEEEecCH
Confidence 4455555555544 6889999999999984433 4588999999999999999884
No 339
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.17 E-value=0.00048 Score=73.11 Aligned_cols=97 Identities=19% Similarity=0.165 Sum_probs=69.1
Q ss_pred CCeEEEEc--CChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHH
Q 012545 5 SFKYVILG--GGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY 82 (461)
Q Consensus 5 ~~dvvIIG--~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (461)
.++|+||| ||..|+.+|..|++.|.+ |+++++.+ .. ....... . .....+.+
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~---Vtlv~~~~-l~-------~~~~~~~---~------------~~~~~~~l 581 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHE---VTIVSGVH-LA-------NYMHFTL---E------------YPNMMRRL 581 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCE---EEEEESSC-TT-------HHHHHTT---C------------HHHHHHHH
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCE---EEEEeccc-cc-------ccccccc---c------------HHHHHHHH
Confidence 46899999 999999999999999875 99999885 21 0000000 0 01345667
Q ss_pred HHcCcEEEcCCeEEEEeCCCCEEEc--CCC-cE------------------EecCEEEEccCCCcc
Q 012545 83 KEKGIELILSTEIVRADIASKTLLS--ATG-LI------------------FKYQILVIATGSTVS 127 (461)
Q Consensus 83 ~~~~v~~~~~~~v~~i~~~~~~v~~--~~~-~~------------------~~~d~liiAtG~~~~ 127 (461)
++.||+++.++.+.+++.+...+.. .++ ++ +.+|.+|+|+|..|.
T Consensus 582 ~~~GV~i~~~~~v~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~ 647 (729)
T 1o94_A 582 HELHVEELGDHFCSRIEPGRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSE 647 (729)
T ss_dssp HHTTCEEECSEEEEEEETTEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEEC
T ss_pred HhCCCEEEcCcEEEEEECCeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCC
Confidence 7899999999999999865433332 222 22 899999999999883
No 340
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.11 E-value=0.00054 Score=68.41 Aligned_cols=101 Identities=16% Similarity=0.294 Sum_probs=64.3
Q ss_pred CCCEEEeCCHHHHHHHHHHHHh--cCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHHHHH
Q 012545 166 AKNIFYLREIDDADKLVEAIKA--KKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYA 243 (461)
Q Consensus 166 ~~~v~~~~~~~~~~~l~~~l~~--~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~ 243 (461)
.+.++.....++..++.+.+.. .+.++++|+|||.+|..+|..|.+ ..+|.++++ +++-++.+.+.|.
T Consensus 209 gD~v~~i~~~~~i~~~~~~~g~~~~~~~~v~I~GgG~ig~~lA~~L~~-~~~v~iIE~---------d~~r~~~la~~l~ 278 (461)
T 4g65_A 209 DDEVFFVAASNHIRSVMSELQRLEKPYRRIMIVGGGNIGASLAKRLEQ-TYSVKLIER---------NLQRAEKLSEELE 278 (461)
T ss_dssp TCEEEEEEETTTHHHHHHHTTGGGSCCCEEEEECCSHHHHHHHHHHTT-TSEEEEEES---------CHHHHHHHHHHCT
T ss_pred CCEEEEEeccchHHHHHHhhccccccccEEEEEcchHHHHHHHHHhhh-cCceEEEec---------CHHHHHHHHHHCC
Confidence 3456666666667777666643 256899999999999999999864 588999875 5666666666553
Q ss_pred hcCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccCCC
Q 012545 244 NKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGR 289 (461)
Q Consensus 244 ~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G~~ 289 (461)
+..++.+ |+.-..+-.+. .--.+|.+|.+|+-.
T Consensus 279 --~~~Vi~G----------D~td~~~L~ee-~i~~~D~~ia~T~~D 311 (461)
T 4g65_A 279 --NTIVFCG----------DAADQELLTEE-NIDQVDVFIALTNED 311 (461)
T ss_dssp --TSEEEES----------CTTCHHHHHHT-TGGGCSEEEECCSCH
T ss_pred --CceEEec----------cccchhhHhhc-CchhhcEEEEcccCc
Confidence 2223211 22100111111 135789999999964
No 341
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.11 E-value=0.00019 Score=73.40 Aligned_cols=35 Identities=29% Similarity=0.557 Sum_probs=31.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~ 42 (461)
..||+||||||.||+.+|.+|++ |.+ |+|+|+++.
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~---VlvLEaG~~ 59 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYK---VLVLERGSL 59 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSC---EEEECSSBC
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCc---EEEEecCCC
Confidence 35899999999999999999999 876 999999964
No 342
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.08 E-value=0.00042 Score=71.02 Aligned_cols=58 Identities=10% Similarity=0.200 Sum_probs=42.9
Q ss_pred HHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCC---Cc--EE---ecCEEEEccCCCCChhhh
Q 012545 237 FYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKD---GR--TL---EADIVVVGVGGRPLISLF 295 (461)
Q Consensus 237 ~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~---G~--~i---~aD~vi~a~G~~p~~~~~ 295 (461)
++....++.|+++++++.|++|.. +++++.+|++.+ |+ ++ .++.||+|+|.-....++
T Consensus 201 ~l~~~~~~~~~~i~~~~~V~~i~~-~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL 266 (546)
T 1kdg_A 201 YLQTALARPNFTFKTNVMVSNVVR-NGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRIL 266 (546)
T ss_dssp HHHHHHTCTTEEEECSCCEEEEEE-ETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHH
T ss_pred HHHHHhhCCCcEEEeCCEEEEEEE-eCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHH
Confidence 444444456999999999999987 356788888865 64 34 789999999975544444
No 343
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.02 E-value=0.00047 Score=73.30 Aligned_cols=41 Identities=24% Similarity=0.276 Sum_probs=35.0
Q ss_pred cCcEEEcCCcEEEEEecCCCCEEEEEeCCCcEEecCEEEEccC
Q 012545 245 KGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVG 287 (461)
Q Consensus 245 ~GV~v~~~~~v~~i~~~~~g~~~~v~~~~G~~i~aD~vi~a~G 287 (461)
.|++++++++|++|+.++++ ..|++.+|+++.+|.||+|+.
T Consensus 542 ~gl~I~l~t~V~~I~~~~~~--v~V~~~~G~~i~Ad~VIvA~P 582 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSGDE--VQVTTTDGTGYSAQKVLVTVP 582 (776)
T ss_dssp TTSCEESSCCEEEEECSSSS--EEEEETTCCEEEESEEEECCC
T ss_pred hCCcEEcCCeeEEEEEcCCE--EEEEECCCcEEEcCEEEECCC
Confidence 37899999999999974444 468889998999999999986
No 344
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=96.98 E-value=0.0042 Score=64.33 Aligned_cols=51 Identities=22% Similarity=0.283 Sum_probs=38.2
Q ss_pred HHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEe---CCCc--EEecCEEEEccCCCC
Q 012545 239 EGYYANKGIKIIKGTVAVGFTTNADGEVKEVKL---KDGR--TLEADIVVVGVGGRP 290 (461)
Q Consensus 239 ~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~---~~G~--~i~aD~vi~a~G~~p 290 (461)
.+.+++.||+++.++.++++.. +++++.+|.. .+|+ .+.++.||+|+|...
T Consensus 162 ~~~~~~~gv~i~~~~~v~~Li~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 162 YGRSLRYDTSYFVEYFALDLLM-ENGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHTTSCCEEEETEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHhCCCEEEEceEEEEEEE-ECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 3344557899999999999986 3677767665 4675 689999999999643
No 345
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=96.97 E-value=0.0054 Score=65.19 Aligned_cols=35 Identities=20% Similarity=0.337 Sum_probs=31.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCcc
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 225 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 225 (461)
.+|+|||+|..|+.+|..|.+.|.+|+++++.+++
T Consensus 337 ~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 371 (776)
T 4gut_A 337 KSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRI 371 (776)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEecccce
Confidence 57999999999999999999999999999986654
No 346
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.96 E-value=0.00044 Score=70.44 Aligned_cols=52 Identities=19% Similarity=0.335 Sum_probs=37.1
Q ss_pred HhcCcEEEcCCcEEEEEecCCCCEEEEEeCC--C-cEEecCEEEEccCCCCChhhh
Q 012545 243 ANKGIKIIKGTVAVGFTTNADGEVKEVKLKD--G-RTLEADIVVVGVGGRPLISLF 295 (461)
Q Consensus 243 ~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~--G-~~i~aD~vi~a~G~~p~~~~~ 295 (461)
.+.+++++.++.|.++.. +++++.+|...+ + ..+.++.||+|.|.--...++
T Consensus 222 ~r~nl~v~~~~~v~~i~~-~~~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~LL 276 (526)
T 3t37_A 222 GRKNLTILTGSRVRRLKL-EGNQVRSLEVVGRQGSAEVFADQIVLCAGALESPALL 276 (526)
T ss_dssp TCTTEEEECSCEEEEEEE-ETTEEEEEEEEETTEEEEEEEEEEEECSHHHHHHHHH
T ss_pred CCCCeEEEeCCEEEEEEe-cCCeEEEEEEEecCceEEEeecceEEcccccCCcchh
Confidence 356799999999999987 456666666533 2 357789999999954444443
No 347
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=96.93 E-value=0.00065 Score=71.26 Aligned_cols=37 Identities=30% Similarity=0.450 Sum_probs=33.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~ 43 (461)
..+||+|||||++|++||..|++.|++ |+|+|+.+..
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~---v~~~e~~~~~ 142 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMD---VTLLEARDRV 142 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCE---EEEECSSSSS
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCe---EEEEecCCCC
Confidence 358999999999999999999999987 9999998653
No 348
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.90 E-value=0.00055 Score=70.31 Aligned_cols=37 Identities=24% Similarity=0.408 Sum_probs=32.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~ 42 (461)
+.||+||||||.||+.+|.+|++.+. .+|+|||+++.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~--~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPN--VTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTT--SCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCC--CcEEEEecCCC
Confidence 46999999999999999999999762 23999999975
No 349
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=96.89 E-value=0.00084 Score=71.94 Aligned_cols=37 Identities=30% Similarity=0.450 Sum_probs=33.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~ 43 (461)
..+||+|||||++||+||..|++.|++ |+|+|+.+..
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~---v~v~E~~~~~ 313 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMD---VTLLEARDRV 313 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCc---EEEEEecCcC
Confidence 357999999999999999999999987 9999998653
No 350
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=96.88 E-value=0.0081 Score=62.67 Aligned_cols=51 Identities=18% Similarity=0.253 Sum_probs=38.5
Q ss_pred HHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEe---CCCc--EEecCEEEEccCCC
Q 012545 238 YEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKL---KDGR--TLEADIVVVGVGGR 289 (461)
Q Consensus 238 ~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~---~~G~--~i~aD~vi~a~G~~ 289 (461)
+.+.+++.||+++.++.|+++.. +++++.+|.. .+|+ .+.|+.||+|+|..
T Consensus 164 L~~~a~~~gv~i~~~~~v~~L~~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~ 219 (660)
T 2bs2_A 164 VANECLKLGVSIQDRKEAIALIH-QDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGY 219 (660)
T ss_dssp HHHHHHHHTCEEECSEEEEEEEE-ETTEEEEEEEEETTTCCEEEEECSEEEECCCCC
T ss_pred HHHHHHhCCCEEEECcEEEEEEe-cCCEEEEEEEEECCCCcEEEEEcCEEEEccCcc
Confidence 33445567899999999999986 4566666654 5675 48999999999953
No 351
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.78 E-value=0.00084 Score=68.67 Aligned_cols=53 Identities=23% Similarity=0.345 Sum_probs=39.9
Q ss_pred HHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEeCC---Cc--EEecC-EEEEccCCC
Q 012545 237 FYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKD---GR--TLEAD-IVVVGVGGR 289 (461)
Q Consensus 237 ~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~---G~--~i~aD-~vi~a~G~~ 289 (461)
.+...+++.|++++.++.|++|..++++++.+|++.+ |+ ++.|+ .||+|+|.-
T Consensus 214 ~l~~a~~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~ 272 (546)
T 2jbv_A 214 YIHPIVEQENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAI 272 (546)
T ss_dssp HTGGGTTCTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHH
T ss_pred HHHHHhcCCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCcc
Confidence 3334444679999999999999984337788888744 53 68898 999999963
No 352
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.76 E-value=0.00061 Score=71.19 Aligned_cols=34 Identities=21% Similarity=0.456 Sum_probs=31.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcC--------CCCCcEEEEeCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQG--------VKPGELAIISKEA 41 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g--------~~~~~V~vie~~~ 41 (461)
.++|+|||||++||+||..|++.| ++ |+|+|+.+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~---V~v~E~~~ 97 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGID---VQIYEADP 97 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEE---EEEECCCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCce---EEEEeccC
Confidence 479999999999999999999988 54 99999987
No 353
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.71 E-value=0.0013 Score=66.59 Aligned_cols=36 Identities=17% Similarity=0.336 Sum_probs=32.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~ 42 (461)
..+|++|||+|++|+.+|..|++.|.+ |+|+|++..
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~---v~~~e~~~~ 45 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIP---TQIVEMGRS 45 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCc---EEEEECCCC
Confidence 468999999999999999999998877 999999864
No 354
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.70 E-value=0.0013 Score=67.88 Aligned_cols=56 Identities=13% Similarity=0.160 Sum_probs=41.2
Q ss_pred HHHHhcCcEEEcCCcEEEEEecCC---CCEEEEEeC--CCc--EEec-CEEEEccCCCCChhhh
Q 012545 240 GYYANKGIKIIKGTVAVGFTTNAD---GEVKEVKLK--DGR--TLEA-DIVVVGVGGRPLISLF 295 (461)
Q Consensus 240 ~~l~~~GV~v~~~~~v~~i~~~~~---g~~~~v~~~--~G~--~i~a-D~vi~a~G~~p~~~~~ 295 (461)
...++.|+++++++.|++|..+++ +++.+|+.. +|+ ++.| +.||+|+|.-.+..++
T Consensus 239 ~~~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL 302 (587)
T 1gpe_A 239 PNYQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLIL 302 (587)
T ss_dssp TTTTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHH
T ss_pred HhhcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHH
Confidence 344567999999999999986432 467777764 564 5678 8999999976555544
No 355
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.68 E-value=0.00095 Score=68.56 Aligned_cols=60 Identities=12% Similarity=0.213 Sum_probs=43.2
Q ss_pred HHHHHHHHhcCcEEEcCCcEEEEEecC---CCCEEEEEeC--CCc--EEecC-EEEEccCCCCChhhh
Q 012545 236 AFYEGYYANKGIKIIKGTVAVGFTTNA---DGEVKEVKLK--DGR--TLEAD-IVVVGVGGRPLISLF 295 (461)
Q Consensus 236 ~~~~~~l~~~GV~v~~~~~v~~i~~~~---~g~~~~v~~~--~G~--~i~aD-~vi~a~G~~p~~~~~ 295 (461)
..+...+++.++++++++.|++|..++ ++++.+|++. +|+ ++.|+ -||+|.|.--...++
T Consensus 231 ayL~p~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL 298 (583)
T 3qvp_A 231 EWLLPNYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTIL 298 (583)
T ss_dssp HHTTTTTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHH
T ss_pred HHHHHhhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHH
Confidence 344445567899999999999998743 5678888874 564 46675 699999965444444
No 356
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.66 E-value=0.01 Score=62.19 Aligned_cols=32 Identities=22% Similarity=0.406 Sum_probs=29.9
Q ss_pred cEEEECCCHHHHHHHHHHHH-----CCCcEEEEccCC
Q 012545 192 KAVVVGGGYIGLELSAALKI-----NNIDVSMVYPEP 223 (461)
Q Consensus 192 ~v~VvG~G~~g~e~a~~l~~-----~g~~Vtli~~~~ 223 (461)
.|+|||+|+.|+-+|..|++ .|.+|+++++.+
T Consensus 10 dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~ 46 (665)
T 1pn0_A 10 DVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRS 46 (665)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred cEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCC
Confidence 69999999999999999999 999999999764
No 357
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=96.63 E-value=0.013 Score=61.12 Aligned_cols=50 Identities=14% Similarity=0.224 Sum_probs=37.2
Q ss_pred HHHHhc-Cc-EEEcCCcEEEEEecCC--CCEEEEEe---CCCc--EEecCEEEEccCCC
Q 012545 240 GYYANK-GI-KIIKGTVAVGFTTNAD--GEVKEVKL---KDGR--TLEADIVVVGVGGR 289 (461)
Q Consensus 240 ~~l~~~-GV-~v~~~~~v~~i~~~~~--g~~~~v~~---~~G~--~i~aD~vi~a~G~~ 289 (461)
+.+++. || +++.++.++++..+++ +++.+|.. .+|+ .+.|+.||+|+|..
T Consensus 159 ~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~ 217 (643)
T 1jnr_A 159 EAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGA 217 (643)
T ss_dssp HHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCB
T ss_pred HHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCcc
Confidence 344455 89 9999999999987433 27777653 5665 68999999999953
No 358
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.62 E-value=0.0015 Score=66.08 Aligned_cols=36 Identities=19% Similarity=0.334 Sum_probs=32.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~ 42 (461)
..+|++|||+|++|+.+|..|++.|.+ |+|+|++..
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~---v~~~e~~~~ 39 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQ---TLMLEMGQL 39 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCc---EEEEeCCCC
Confidence 468999999999999999999998877 999999874
No 359
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.56 E-value=0.01 Score=59.92 Aligned_cols=102 Identities=14% Similarity=0.173 Sum_probs=70.4
Q ss_pred cEEEECCCHHHHHHHHHHHHCC--------------CcEEEEccCCcc-------CCc----------------------
Q 012545 192 KAVVVGGGYIGLELSAALKINN--------------IDVSMVYPEPWC-------MPR---------------------- 228 (461)
Q Consensus 192 ~v~VvG~G~~g~e~a~~l~~~g--------------~~Vtli~~~~~~-------~~~---------------------- 228 (461)
.|+|||+|+.|+-+|..|.+.+ ....++++.+.+ ++.
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s~~s 120 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRSSFT 120 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTCTTS
T ss_pred cEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCCccc
Confidence 4899999999999999887642 345566665421 110
Q ss_pred -------------------c--cCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCC------CEEEEEeCCC-----cE
Q 012545 229 -------------------L--FTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADG------EVKEVKLKDG-----RT 276 (461)
Q Consensus 229 -------------------~--~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g------~~~~v~~~~G-----~~ 276 (461)
. .-.++.++++...++.+..++++++|++++..+.+ ....|++.++ ++
T Consensus 121 f~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~ 200 (501)
T 4b63_A 121 FLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISA 200 (501)
T ss_dssp HHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEE
T ss_pred hHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEE
Confidence 0 01245666777777777789999999999863332 2356666544 36
Q ss_pred EecCEEEEccCCCCChh
Q 012545 277 LEADIVVVGVGGRPLIS 293 (461)
Q Consensus 277 i~aD~vi~a~G~~p~~~ 293 (461)
+.|+.||+|+|..|..+
T Consensus 201 ~~ar~vVlatG~~P~iP 217 (501)
T 4b63_A 201 RRTRKVVIAIGGTAKMP 217 (501)
T ss_dssp EEEEEEEECCCCEECCC
T ss_pred EEeCEEEECcCCCCCCC
Confidence 88999999999887754
No 360
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.42 E-value=0.0013 Score=67.42 Aligned_cols=55 Identities=15% Similarity=0.238 Sum_probs=39.4
Q ss_pred HHHHHHHHHhcCcEEEcCCcEEEEEec---CC-CCEEEEEeCC--C-c--EEec-CEEEEccCCC
Q 012545 235 AAFYEGYYANKGIKIIKGTVAVGFTTN---AD-GEVKEVKLKD--G-R--TLEA-DIVVVGVGGR 289 (461)
Q Consensus 235 ~~~~~~~l~~~GV~v~~~~~v~~i~~~---~~-g~~~~v~~~~--G-~--~i~a-D~vi~a~G~~ 289 (461)
..++...+++.++++++++.|++|..+ ++ +++.+|++.+ | + ++.| .-||+|.|.-
T Consensus 211 ~ayL~p~~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai 275 (566)
T 3fim_B 211 TAYLRPAQSRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSV 275 (566)
T ss_dssp HHTHHHHTTCTTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHH
T ss_pred HHHhhhhccCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCc
Confidence 344555556789999999999999874 12 4667777643 4 3 4667 7799999954
No 361
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=96.04 E-value=0.0062 Score=55.21 Aligned_cols=34 Identities=21% Similarity=0.282 Sum_probs=31.8
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEccCCcc
Q 012545 192 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 225 (461)
Q Consensus 192 ~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 225 (461)
.|+|||+|+.|+-+|..|++.|.+|+++++.+.+
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 5999999999999999999999999999988764
No 362
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=95.99 E-value=0.024 Score=59.07 Aligned_cols=51 Identities=18% Similarity=0.234 Sum_probs=36.9
Q ss_pred HHHHHHhc--CcEEEcCCcEEEEEecCC--CCEEEEEe---CCCc--EEecCEEEEccCC
Q 012545 238 YEGYYANK--GIKIIKGTVAVGFTTNAD--GEVKEVKL---KDGR--TLEADIVVVGVGG 288 (461)
Q Consensus 238 ~~~~l~~~--GV~v~~~~~v~~i~~~~~--g~~~~v~~---~~G~--~i~aD~vi~a~G~ 288 (461)
+.+.+++. ||+++.++.++++..+++ +++.+|.. .+|+ .+.|+.||+|||.
T Consensus 172 L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG 231 (662)
T 3gyx_A 172 VAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGG 231 (662)
T ss_dssp HHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCC
T ss_pred HHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCc
Confidence 34444555 899999888888877444 37777754 4554 5899999999994
No 363
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=95.64 E-value=0.012 Score=60.61 Aligned_cols=61 Identities=8% Similarity=-0.003 Sum_probs=51.9
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCC-CCEEEEEeCCCcEEecCEEEEccCCCCC
Q 012545 231 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNAD-GEVKEVKLKDGRTLEADIVVVGVGGRPL 291 (461)
Q Consensus 231 ~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~-g~~~~v~~~~G~~i~aD~vi~a~G~~p~ 291 (461)
...+.+.+.+.++..|.+++++++|.+|..+++ |++.+|.+.+|+++.||.||.....-|.
T Consensus 377 ~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~lp~ 438 (650)
T 1vg0_A 377 QGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSE 438 (650)
T ss_dssp TTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGGBCT
T ss_pred hhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhhcCH
Confidence 567888999999999999999999999987443 7888888888999999999997765553
No 364
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.58 E-value=0.02 Score=54.24 Aligned_cols=80 Identities=20% Similarity=0.223 Sum_probs=58.4
Q ss_pred CCCcEEEECCCHHHHH-HHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEE
Q 012545 189 KNGKAVVVGGGYIGLE-LSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVK 267 (461)
Q Consensus 189 ~~~~v~VvG~G~~g~e-~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~ 267 (461)
..+++.|+|-|-+|+. +|..|.++|.+|+..+..+.. + ..+.|++.|++++.+.....
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~------~-----~~~~L~~~gi~v~~g~~~~~---------- 61 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYP------P-----MSTQLEALGIDVYEGFDAAQ---------- 61 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCT------T-----HHHHHHHTTCEEEESCCGGG----------
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCc------H-----HHHHHHhCCCEEECCCCHHH----------
Confidence 3678999999999997 899999999999999876431 1 23557778998875532110
Q ss_pred EEEeCCCcEEecCEEEEccCCCCChhhh
Q 012545 268 EVKLKDGRTLEADIVVVGVGGRPLISLF 295 (461)
Q Consensus 268 ~v~~~~G~~i~aD~vi~a~G~~p~~~~~ 295 (461)
+.. -.+|.||+++|..|..+.+
T Consensus 62 ---l~~---~~~d~vV~Spgi~~~~p~~ 83 (326)
T 3eag_A 62 ---LDE---FKADVYVIGNVAKRGMDVV 83 (326)
T ss_dssp ---GGS---CCCSEEEECTTCCTTCHHH
T ss_pred ---cCC---CCCCEEEECCCcCCCCHHH
Confidence 000 1479999999998877655
No 365
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.49 E-value=0.016 Score=57.60 Aligned_cols=82 Identities=18% Similarity=0.171 Sum_probs=60.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEE
Q 012545 189 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKE 268 (461)
Q Consensus 189 ~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~ 268 (461)
.++++.|+|.|.+|+.+|..|.++|.+|+..+..+... ++ ..+.|++.|++++.+....++
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~----~~-----~~~~L~~~gi~~~~g~~~~~~---------- 68 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDE----NP-----TAQSLLEEGIKVVCGSHPLEL---------- 68 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGG----CH-----HHHHHHHTTCEEEESCCCGGG----------
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccC----Ch-----HHHHHHhCCCEEEECCChHHh----------
Confidence 57899999999999999999999999999998765311 11 235677889998866431100
Q ss_pred EEeCCCcEEecCEEEEccCCCCChhhh
Q 012545 269 VKLKDGRTLEADIVVVGVGGRPLISLF 295 (461)
Q Consensus 269 v~~~~G~~i~aD~vi~a~G~~p~~~~~ 295 (461)
+ ++ .+|.||+++|..++.+.+
T Consensus 69 --~-~~---~~d~vv~spgi~~~~p~~ 89 (451)
T 3lk7_A 69 --L-DE---DFCYMIKNPGIPYNNPMV 89 (451)
T ss_dssp --G-GS---CEEEEEECTTSCTTSHHH
T ss_pred --h-cC---CCCEEEECCcCCCCChhH
Confidence 0 00 179999999998877654
No 366
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=95.28 E-value=0.014 Score=55.17 Aligned_cols=76 Identities=11% Similarity=0.079 Sum_probs=51.0
Q ss_pred HHHHHHHhcCCCcEEEECCCHHHHHHHHHHHH--CCCcEEEEccCCccCCccc------CH-HHHHHHHHHHHhcCcEEE
Q 012545 180 KLVEAIKAKKNGKAVVVGGGYIGLELSAALKI--NNIDVSMVYPEPWCMPRLF------TA-DIAAFYEGYYANKGIKII 250 (461)
Q Consensus 180 ~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~--~g~~Vtli~~~~~~~~~~~------~~-~~~~~~~~~l~~~GV~v~ 250 (461)
++.+.+.......|+|||+|+.|+-+|..|++ .|.+|+++++.+.+..... +. .+.+.+.+.+++.|+++.
T Consensus 55 ~~~~~~~~~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~~~~~~~~~e~Gv~~~ 134 (326)
T 3fpz_A 55 RYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYE 134 (326)
T ss_dssp HHHHHHHHTTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTTCCCEEEETTTHHHHHHTTCCCE
T ss_pred HHHhhhhhccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCccCCHHHHHHHHHHHHHHcCCEEE
Confidence 44444555556789999999999999999964 5999999998765432210 10 111234456677888887
Q ss_pred cCCcE
Q 012545 251 KGTVA 255 (461)
Q Consensus 251 ~~~~v 255 (461)
.+...
T Consensus 135 ~~~~~ 139 (326)
T 3fpz_A 135 DEGDY 139 (326)
T ss_dssp ECSSE
T ss_pred ECCcc
Confidence 66543
No 367
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=95.19 E-value=0.014 Score=58.79 Aligned_cols=36 Identities=25% Similarity=0.323 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccC
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM 226 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~ 226 (461)
|+|+|||+|..|+-+|..|++.|.+|+++++.+++.
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~G 37 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPG 37 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC----
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCC
Confidence 589999999999999999999999999999987754
No 368
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.14 E-value=0.031 Score=46.36 Aligned_cols=33 Identities=15% Similarity=0.291 Sum_probs=30.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~ 40 (461)
..+++|+|+|..|...|..|.+.|++ |+++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~---V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQN---VTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCC---EEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCC---EEEEECC
Confidence 57899999999999999999999887 9999987
No 369
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.13 E-value=0.022 Score=46.52 Aligned_cols=34 Identities=21% Similarity=0.464 Sum_probs=31.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
+++++|+|+|..|...|..|.+.|++ |+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~---V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKK---VLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCe---EEEEECCH
Confidence 46899999999999999999999987 99999874
No 370
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.79 E-value=0.032 Score=45.14 Aligned_cols=34 Identities=18% Similarity=0.303 Sum_probs=29.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
.++++|||+|..|...|..|.+.|++ |+++|+++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~---v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHD---IVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCE---EEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCe---EEEEECCH
Confidence 46899999999999999999998876 99999863
No 371
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.68 E-value=0.035 Score=45.31 Aligned_cols=34 Identities=12% Similarity=0.238 Sum_probs=31.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
+.+++|||.|..|...|..|.+.|++ |+++|+++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~---v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIP---LVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCC---EEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC---EEEEECCH
Confidence 46899999999999999999999987 99999984
No 372
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.67 E-value=0.032 Score=43.60 Aligned_cols=34 Identities=9% Similarity=0.244 Sum_probs=29.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcC-CCCCcEEEEeCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQG-VKPGELAIISKEA 41 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g-~~~~~V~vie~~~ 41 (461)
.++++|+|+|..|...+..|.+.| ++ |+++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~---v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYS---VTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEE---EEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCce---EEEEeCCH
Confidence 468999999999999999999988 54 99999874
No 373
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.64 E-value=0.038 Score=45.95 Aligned_cols=34 Identities=24% Similarity=0.287 Sum_probs=30.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
..+|+|||+|..|...|..|.+.|.+ |+++++++
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~---V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHS---VVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCe---EEEEECCH
Confidence 47899999999999999999998875 99999874
No 374
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.63 E-value=0.02 Score=50.83 Aligned_cols=107 Identities=16% Similarity=0.264 Sum_probs=67.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEE
Q 012545 189 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKE 268 (461)
Q Consensus 189 ~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~ 268 (461)
.+++|+|||+|.+|...+..|.+.|.+|+++.+. +.+++ .+..++.+++++... +.. +
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~-------~~~~l----~~l~~~~~i~~i~~~----~~~--~----- 87 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT-------VSAEI----NEWEAKGQLRVKRKK----VGE--E----- 87 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS-------CCHHH----HHHHHTTSCEEECSC----CCG--G-----
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC-------CCHHH----HHHHHcCCcEEEECC----CCH--h-----
Confidence 5799999999999999999999999999999753 34443 333345557665321 110 1
Q ss_pred EEeCCCcEEecCEEEEccCCCCChhhhhcccccCCCcEEeCCC-----CCCCCCCEEEeCccc
Q 012545 269 VKLKDGRTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDF-----FKTSADDVYAVGDVA 326 (461)
Q Consensus 269 v~~~~G~~i~aD~vi~a~G~~p~~~~~~~~~~~~~g~i~vd~~-----~~t~~~~vya~GD~~ 326 (461)
.--.+|+||.|||-......+.... . .+|.||.- +.--.|.++--|+..
T Consensus 88 ------dL~~adLVIaAT~d~~~N~~I~~~a--k-~gi~VNvvD~p~~~~f~~Paiv~rg~l~ 141 (223)
T 3dfz_A 88 ------DLLNVFFIVVATNDQAVNKFVKQHI--K-NDQLVNMASSFSDGNIQIPAQFSRGRLS 141 (223)
T ss_dssp ------GSSSCSEEEECCCCTHHHHHHHHHS--C-TTCEEEC-----CCSEECCEEEEETTEE
T ss_pred ------HhCCCCEEEECCCCHHHHHHHHHHH--h-CCCEEEEeCCcccCeEEEeeEEEeCCEE
Confidence 1124899999999765443332211 2 45666521 222467777777655
No 375
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.59 E-value=0.045 Score=51.78 Aligned_cols=77 Identities=16% Similarity=0.115 Sum_probs=53.9
Q ss_pred CCCeEEEEcCChHHHH-HHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHH
Q 012545 4 KSFKYVILGGGVSAGY-AAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY 82 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~-aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (461)
..++|.|||.|.+|++ +|..|.++|++ |++.|..+.. ...+.+
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~---V~~~D~~~~~---------------------------------~~~~~L 46 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFE---VSGCDAKMYP---------------------------------PMSTQL 46 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCE---EEEEESSCCT---------------------------------THHHHH
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCE---EEEEcCCCCc---------------------------------HHHHHH
Confidence 3568999999999997 68888999987 9999987431 113446
Q ss_pred HHcCcEEEcCCeEEEEeCCCCEEEcCCCcEEecCEEEEccCCCccc
Q 012545 83 KEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVSI 128 (461)
Q Consensus 83 ~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~liiAtG~~~~~ 128 (461)
++.|+++..+.. .+. +.. ..+|.+|+.+|-.+.-
T Consensus 47 ~~~gi~v~~g~~-----~~~----l~~---~~~d~vV~Spgi~~~~ 80 (326)
T 3eag_A 47 EALGIDVYEGFD-----AAQ----LDE---FKADVYVIGNVAKRGM 80 (326)
T ss_dssp HHTTCEEEESCC-----GGG----GGS---CCCSEEEECTTCCTTC
T ss_pred HhCCCEEECCCC-----HHH----cCC---CCCCEEEECCCcCCCC
Confidence 677888876531 110 000 1479999999987743
No 376
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=94.56 E-value=0.033 Score=53.71 Aligned_cols=100 Identities=18% Similarity=0.227 Sum_probs=74.8
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCc-----cc------------------------------------
Q 012545 192 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR-----LF------------------------------------ 230 (461)
Q Consensus 192 ~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~-----~~------------------------------------ 230 (461)
.|+|||+|+.|+-+|..|++.|.+|+++++.+.+... .+
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRPII 85 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSCEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCceEee
Confidence 4899999999999999999999999999986543110 00
Q ss_pred ---------------CHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEe-CCC--cEEecCEEEEccCCCCCh
Q 012545 231 ---------------TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKL-KDG--RTLEADIVVVGVGGRPLI 292 (461)
Q Consensus 231 ---------------~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~-~~G--~~i~aD~vi~a~G~~p~~ 292 (461)
-..+.+.+.+.+++.|++++.+++++++.. +++.+..+.. .++ .++.+|.||-|.|.....
T Consensus 86 ~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~-~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~v 164 (397)
T 3oz2_A 86 LQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIK-ENGKVAGAKIRHNNEIVDVRAKMVIAADGFESEF 164 (397)
T ss_dssp EECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEE-ETTEEEEEEEEETTEEEEEEEEEEEECCCTTCHH
T ss_pred ccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeee-ccceeeeeeecccccceEEEEeEEEeCCccccHH
Confidence 013455677777889999999999999887 3555444443 233 368999999999976543
No 377
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=94.51 E-value=0.058 Score=55.22 Aligned_cols=170 Identities=12% Similarity=0.081 Sum_probs=0.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCC----------------------------------------
Q 012545 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV---------------------------------------- 42 (461)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~---------------------------------------- 42 (461)
..+.+++|+|.|..|...|..|.+.+.+ |+++|+++.
T Consensus 125 ~~~~hviI~G~g~~g~~la~~L~~~~~~---vvvid~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~t~~ 201 (565)
T 4gx0_A 125 DTRGHILIFGIDPITRTLIRKLESRNHL---FVVVTDNYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIANLS 201 (565)
T ss_dssp TCCSCEEEESCCHHHHHHHHHTTTTTCC---EEEEESCHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSEEEECSC
T ss_pred ccCCeEEEECCChHHHHHHHHHHHCCCC---EEEEECCHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCEEEEeCC
Q ss_pred ----------------------------------------------------CCCCCCcccccccCCCCCCCCCCceeec
Q 012545 43 ----------------------------------------------------APYERPALSKAYLFPEGTARLPGFHVCV 70 (461)
Q Consensus 43 ----------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (461)
.....|.....+........+..+...
T Consensus 202 D~~n~~~~~~ar~~~~~~iiar~~~~~~~~~l~~~Gad~vi~p~~~~~~~la~~~~~p~~~~~~~~~~~~~~l~e~~v~- 280 (565)
T 4gx0_A 202 DPDNANLCLTVRSLCQTPIIAVVKEPVHGELLRLAGANQVVPLTRILGRYLGIRATTCGALAHILDSFGNLQIAELPVH- 280 (565)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECSSGGGHHHHHHHTCSEEECHHHHHHHHHHHHHHC-----------------------
T ss_pred cHHHHHHHHHHHHhcCceEEEEECCHHHHHHHHHcCCCEEEChHHHHHHHHHHHhcccccccchhcccCCceEEEEEEC-
Q ss_pred CCCCCCCCHhHHHHcCcEEEcCCeEEEEeCCCCEEEcCCCcEEecCEEEEccCCCccccccccccccCccccccccCCcc
Q 012545 71 GSGGERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVSITSLTSIRSKHCLCCFFLRTLPL 150 (461)
Q Consensus 71 ~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~liiAtG~~~~~~~~~g~~~~~~~~~~~~~~~p~ 150 (461)
+..........+ ...-..+..+..+..+++.+.-.....+...-.++-.|...
T Consensus 281 ~s~l~G~~l~el---~~~~~~~~~vi~i~r~g~~~~p~~~~~l~~GD~L~v~g~~~------------------------ 333 (565)
T 4gx0_A 281 GTPFAGKTIGES---GIRQRTGLSIIGVWERGSLTTPQRETVLTEQSLLVLAGTKS------------------------ 333 (565)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCccCCCCHHHc---CcchhcCCEEEEEEECCEEeCCCCCcEeCCCCEEEEEeCHH------------------------
Q ss_pred cccccccCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCc
Q 012545 151 FQVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR 228 (461)
Q Consensus 151 ~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~ 228 (461)
++..+.++...-... ++++|+|.|..|..+|..|.+.|.+|++++..+.....
T Consensus 334 -----------------------~l~~~~~~~~~~~~~--~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~ 386 (565)
T 4gx0_A 334 -----------------------QLAALEYLIGEAPED--ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCN 386 (565)
T ss_dssp ------------------------------------CC--CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCC
T ss_pred -----------------------HHHHHHHHhcCCCCC--CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhh
No 378
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=94.50 E-value=0.04 Score=55.34 Aligned_cols=39 Identities=21% Similarity=0.210 Sum_probs=34.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCC
Q 012545 189 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP 227 (461)
Q Consensus 189 ~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~ 227 (461)
.+.+|+|||+|.+|+.+|..|.+.|.+|+++++.+++..
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg 70 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGG 70 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCC
Confidence 357899999999999999999999999999999877644
No 379
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=94.26 E-value=0.035 Score=55.78 Aligned_cols=72 Identities=11% Similarity=0.140 Sum_probs=52.2
Q ss_pred CCCeEEEEcCChHHHH-HHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHH
Q 012545 4 KSFKYVILGGGVSAGY-AAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY 82 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~-aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (461)
+.++|.|||.|-+|++ +|..|.++|++ |++.|.... ...+.+
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~---V~~~D~~~~----------------------------------~~~~~l 63 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQ---ISGSDLAPN----------------------------------SVTQHL 63 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCE---EEEECSSCC----------------------------------HHHHHH
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCe---EEEEECCCC----------------------------------HHHHHH
Confidence 4579999999999997 69999999987 999987631 113446
Q ss_pred HHcCcEEEcCCeEEEEeCCCCEEEcCCCcEEecCEEEEccCCCc
Q 012545 83 KEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTV 126 (461)
Q Consensus 83 ~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~liiAtG~~~ 126 (461)
++.|+++..+.. .+ . + ..+|.+|+.+|-.+
T Consensus 64 ~~~gi~~~~g~~-----~~--~--~-----~~~d~vV~Spgi~~ 93 (494)
T 4hv4_A 64 TALGAQIYFHHR-----PE--N--V-----LDASVVVVSTAISA 93 (494)
T ss_dssp HHTTCEEESSCC-----GG--G--G-----TTCSEEEECTTSCT
T ss_pred HHCCCEEECCCC-----HH--H--c-----CCCCEEEECCCCCC
Confidence 678998887631 11 0 1 14799999999776
No 380
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=94.20 E-value=0.1 Score=52.18 Aligned_cols=35 Identities=20% Similarity=0.441 Sum_probs=32.6
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 012545 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (461)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~ 43 (461)
+||+|||||++||+||..|++.|++ |+|+|+++..
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~---v~v~E~~~~~ 74 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFK---TLLLEARDRI 74 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCC---EEEECSSSBS
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCC---EEEEeCCCCC
Confidence 8999999999999999999999987 9999999753
No 381
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=94.07 E-value=0.05 Score=51.06 Aligned_cols=38 Identities=18% Similarity=0.331 Sum_probs=33.7
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCC
Q 012545 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (461)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~ 40 (461)
|||+..+|.|||+|..|.+.|..|+..|+ .+|+++|.+
T Consensus 4 m~~~~~kv~ViGaG~vG~~ia~~l~~~g~--~~v~l~D~~ 41 (315)
T 3tl2_A 4 MTIKRKKVSVIGAGFTGATTAFLLAQKEL--ADVVLVDIP 41 (315)
T ss_dssp CCCCCCEEEEECCSHHHHHHHHHHHHTTC--CEEEEECCG
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHhCCC--CeEEEEecc
Confidence 66677899999999999999999999887 359999987
No 382
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=93.74 E-value=0.069 Score=43.27 Aligned_cols=34 Identities=15% Similarity=0.353 Sum_probs=30.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
..+++|+|+|..|...|..|.+.|++ |+++++++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~---v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHE---VLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCC---CEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCE---EEEEeCCH
Confidence 45799999999999999999999876 99999874
No 383
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=93.73 E-value=0.066 Score=49.49 Aligned_cols=37 Identities=22% Similarity=0.222 Sum_probs=32.7
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
|| +.++|.|||+|.-|...|..|++.|++ |+++|+++
T Consensus 1 Mm-~~~kV~VIGaG~mG~~iA~~la~~G~~---V~l~d~~~ 37 (283)
T 4e12_A 1 MT-GITNVTVLGTGVLGSQIAFQTAFHGFA---VTAYDINT 37 (283)
T ss_dssp CC-SCCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSH
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHhCCCe---EEEEeCCH
Confidence 55 467999999999999999999999986 99999874
No 384
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=93.67 E-value=0.071 Score=52.20 Aligned_cols=34 Identities=32% Similarity=0.367 Sum_probs=31.8
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEccCCcc
Q 012545 192 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 225 (461)
Q Consensus 192 ~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 225 (461)
+|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMI 35 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 6899999999999999999999999999998764
No 385
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=93.40 E-value=0.21 Score=51.50 Aligned_cols=37 Identities=14% Similarity=0.382 Sum_probs=34.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~ 43 (461)
+.|||+|||+|..|...|..|++.|.+ |++||++++.
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~---vl~id~~~~~ 43 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQR---VLHVDSRSYY 43 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSS
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCE---EEEEcCCCcc
Confidence 369999999999999999999999987 9999999864
No 386
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.39 E-value=0.074 Score=52.75 Aligned_cols=77 Identities=19% Similarity=0.236 Sum_probs=55.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcccccccCCCCCCCCCCceeecCCCCCCCCHhHHH
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (461)
+.++|.|||.|.+|+++|..|+++|++ |++.|..+.. .....+.++
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~---V~~~D~~~~~-------------------------------~~~~~~~L~ 53 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAI---VTVNDGKPFD-------------------------------ENPTAQSLL 53 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCE---EEEEESSCGG-------------------------------GCHHHHHHH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCE---EEEEeCCccc-------------------------------CChHHHHHH
Confidence 357999999999999999999999987 9999987420 001234567
Q ss_pred HcCcEEEcCCeEEEEeCCCCEEEcCCCcEEe-cCEEEEccCCCcc
Q 012545 84 EKGIELILSTEIVRADIASKTLLSATGLIFK-YQILVIATGSTVS 127 (461)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~-~d~liiAtG~~~~ 127 (461)
+.|+++..+... +. . .-. +|.+|+++|..+.
T Consensus 54 ~~gi~~~~g~~~-----~~----~----~~~~~d~vv~spgi~~~ 85 (451)
T 3lk7_A 54 EEGIKVVCGSHP-----LE----L----LDEDFCYMIKNPGIPYN 85 (451)
T ss_dssp HTTCEEEESCCC-----GG----G----GGSCEEEEEECTTSCTT
T ss_pred hCCCEEEECCCh-----HH----h----hcCCCCEEEECCcCCCC
Confidence 789998876421 10 0 012 7999999998773
No 387
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=93.31 E-value=0.1 Score=51.07 Aligned_cols=61 Identities=15% Similarity=0.141 Sum_probs=45.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCC-CcEEEEccCCccCCcc----------------cCHHHHHHHHHHHHhcCcEEE
Q 012545 189 KNGKAVVVGGGYIGLELSAALKINN-IDVSMVYPEPWCMPRL----------------FTADIAAFYEGYYANKGIKII 250 (461)
Q Consensus 189 ~~~~v~VvG~G~~g~e~a~~l~~~g-~~Vtli~~~~~~~~~~----------------~~~~~~~~~~~~l~~~GV~v~ 250 (461)
...+|+|||+|..|+-+|..|++.| .+|+++++.+++.... +.. ....+.+.+++.|+++.
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G~~~d~G~~~~~~-~~~~~~~l~~~~g~~~~ 82 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHGRRYEMGAIMGVP-SYDTIQEIMDRTGDKVD 82 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETTEECCSSCCCBCT-TCHHHHHHHHHHCCCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCCcccccCceeecC-CcHHHHHHHHHhCCccc
Confidence 3568999999999999999999999 8999999987653210 111 12345677778887654
No 388
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=93.22 E-value=0.078 Score=51.87 Aligned_cols=34 Identities=32% Similarity=0.377 Sum_probs=31.9
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEccCCcc
Q 012545 192 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 225 (461)
Q Consensus 192 ~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 225 (461)
+|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKAGHEVEVFERLPIT 35 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCC
Confidence 6899999999999999999999999999998764
No 389
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=93.19 E-value=0.12 Score=51.27 Aligned_cols=38 Identities=18% Similarity=0.330 Sum_probs=34.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCCC
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP 44 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~~ 44 (461)
..+||||||||++|++||..|++.|++ |+|+|+++...
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~---V~vlE~~~~~G 47 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKK---VLHIDKQDHYG 47 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCe---EEEEeCCCCCC
Confidence 468999999999999999999999987 99999997643
No 390
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=93.15 E-value=0.086 Score=50.19 Aligned_cols=34 Identities=24% Similarity=0.377 Sum_probs=31.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCc
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW 224 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~ 224 (461)
..|+|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~ 38 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEG 38 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 4799999999999999999999999999999853
No 391
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=93.12 E-value=0.087 Score=51.91 Aligned_cols=39 Identities=13% Similarity=0.333 Sum_probs=34.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 012545 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (461)
Q Consensus 2 m~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~ 43 (461)
|++.+||+|||+|++|+++|..|++.|++ |+|+|+++..
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~g~~---v~~~e~~~~~ 41 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVNGKK---VLHMDRNPYY 41 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSS
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCc---EEEEecCCCc
Confidence 44578999999999999999999999987 9999998754
No 392
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.10 E-value=0.074 Score=46.96 Aligned_cols=32 Identities=34% Similarity=0.553 Sum_probs=29.7
Q ss_pred eEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 7 KYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 7 dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
+|+|||+|..|...|..|.+.|++ |+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~---v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYG---VVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCC---EEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCe---EEEEECCH
Confidence 699999999999999999999887 99999874
No 393
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=93.04 E-value=0.069 Score=52.58 Aligned_cols=34 Identities=26% Similarity=0.455 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCC
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEP 223 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~ 223 (461)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3689999999999999999999999999999876
No 394
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=92.95 E-value=0.24 Score=46.48 Aligned_cols=82 Identities=21% Similarity=0.124 Sum_probs=52.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEc--CCcEEEEEecCCCCEEE
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIK--GTVAVGFTTNADGEVKE 268 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~--~~~v~~i~~~~~g~~~~ 268 (461)
.+|+|+|+|.+|.-+|..|.+.|.+|+++.|.+ . +.+++.|+.+.. .... .+.. ..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~----------~-----~~i~~~Gl~~~~~~~g~~-~~~~------~~ 60 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD----------Y-----ETVKAKGIRIRSATLGDY-TFRP------AA 60 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT----------H-----HHHHHHCEEEEETTTCCE-EECC------SC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh----------H-----HHHHhCCcEEeecCCCcE-EEee------ee
Confidence 479999999999999999999999999988732 0 345566776542 1111 1100 01
Q ss_pred EEeCCCcE-E-ecCEEEEccCCCCChhhh
Q 012545 269 VKLKDGRT-L-EADIVVVGVGGRPLISLF 295 (461)
Q Consensus 269 v~~~~G~~-i-~aD~vi~a~G~~p~~~~~ 295 (461)
+. .+-.. . .+|.||+|+-.....+.+
T Consensus 61 ~~-~~~~~~~~~~DlVilavK~~~~~~~l 88 (320)
T 3i83_A 61 VV-RSAAELETKPDCTLLCIKVVEGADRV 88 (320)
T ss_dssp EE-SCGGGCSSCCSEEEECCCCCTTCCHH
T ss_pred eE-CCHHHcCCCCCEEEEecCCCChHHHH
Confidence 11 22212 2 689999998876655544
No 395
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=92.91 E-value=0.12 Score=49.92 Aligned_cols=37 Identities=22% Similarity=0.323 Sum_probs=33.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccC-Ccc
Q 012545 189 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPE-PWC 225 (461)
Q Consensus 189 ~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~-~~~ 225 (461)
...+|+|||+|..|+-+|..|.+.|.+|+++++. +++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRV 80 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecccccc
Confidence 3568999999999999999999999999999998 553
No 396
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=92.90 E-value=0.097 Score=51.31 Aligned_cols=34 Identities=29% Similarity=0.430 Sum_probs=31.4
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEccCCcc
Q 012545 192 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 225 (461)
Q Consensus 192 ~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 225 (461)
+|+|||+|..|+-+|..|++.|.+|+++++.+++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERL 36 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCc
Confidence 5899999999999999999999999999987654
No 397
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=92.90 E-value=0.092 Score=50.15 Aligned_cols=37 Identities=30% Similarity=0.293 Sum_probs=30.4
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
||+ .++|.|||+|..|...|..|++.|++ |+++++++
T Consensus 1 mm~-~mki~iiG~G~~G~~~a~~L~~~g~~---V~~~~r~~ 37 (359)
T 1bg6_A 1 MIE-SKTYAVLGLGNGGHAFAAYLALKGQS---VLAWDIDA 37 (359)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSCH
T ss_pred CCC-cCeEEEECCCHHHHHHHHHHHhCCCE---EEEEeCCH
Confidence 554 57999999999999999999998875 99998863
No 398
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=92.90 E-value=0.11 Score=46.06 Aligned_cols=34 Identities=21% Similarity=0.485 Sum_probs=31.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCC
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~ 40 (461)
+.++|+|||||..|...+..|.+.|.+ |+|++++
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~---VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAA---ITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCC---EEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCE---EEEECCC
Confidence 468999999999999999999999876 9999986
No 399
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=92.80 E-value=0.12 Score=49.90 Aligned_cols=33 Identities=27% Similarity=0.333 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCC
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEP 223 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~ 223 (461)
+.|+|||+|..|+++|..+++.|.+|+++++.+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 469999999999999999999999999999765
No 400
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.77 E-value=0.13 Score=43.82 Aligned_cols=34 Identities=24% Similarity=0.125 Sum_probs=30.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHc-CCCCCcEEEEeCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQ-GVKPGELAIISKEA 41 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~-g~~~~~V~vie~~~ 41 (461)
..+++|||.|..|...|..|.+. |++ |+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~---V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKI---SLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSC---EEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCe---EEEEECCH
Confidence 35899999999999999999998 987 99999874
No 401
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=92.69 E-value=0.14 Score=42.47 Aligned_cols=36 Identities=19% Similarity=0.263 Sum_probs=32.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCc
Q 012545 189 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW 224 (461)
Q Consensus 189 ~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~ 224 (461)
..++++|+|+|.+|..++..|.+.|.+|+++++.+.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 567999999999999999999999999999987654
No 402
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=92.62 E-value=0.1 Score=50.51 Aligned_cols=35 Identities=26% Similarity=0.330 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCcc
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 225 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 225 (461)
..|+|||+|.+|+-+|..|++.|.+|+++++.+..
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~ 39 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFF 39 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTT
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 36999999999999999999999999999987643
No 403
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=92.56 E-value=0.13 Score=48.28 Aligned_cols=37 Identities=27% Similarity=0.286 Sum_probs=31.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
++++|+|||+|..|.+.|..|+..++ ..+|.++|.++
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~-~~ev~L~Di~~ 42 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQT-ANELVLIDVFK 42 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTC-SSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEeCCh
Confidence 46799999999999999999999876 34699999874
No 404
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=92.55 E-value=0.14 Score=51.25 Aligned_cols=38 Identities=24% Similarity=0.251 Sum_probs=34.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCC
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP 227 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~ 227 (461)
..+|+|||+|..|+-+|..|++.|.+|+++++.+++..
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG 48 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGG 48 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCC
Confidence 56899999999999999999999999999998876533
No 405
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=92.51 E-value=0.11 Score=49.91 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCc
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW 224 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~ 224 (461)
..|+|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~ 37 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDP 37 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3699999999999999999999999999998754
No 406
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.51 E-value=0.12 Score=48.47 Aligned_cols=38 Identities=16% Similarity=0.259 Sum_probs=32.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 2 m~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
|.+.++|.|||+|..|.+.|..|++.|+. +|+++|.++
T Consensus 1 M~~~~kI~VIGaG~~G~~ia~~la~~g~~--~V~l~D~~~ 38 (317)
T 2ewd_A 1 MIERRKIAVIGSGQIGGNIAYIVGKDNLA--DVVLFDIAE 38 (317)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHHTCC--EEEEECSSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCc--eEEEEeCCc
Confidence 44567999999999999999999998872 299999874
No 407
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=92.48 E-value=0.13 Score=49.19 Aligned_cols=38 Identities=29% Similarity=0.308 Sum_probs=32.0
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
|.++.++|.|||+|.-|.+.|..|++.|++ |+++++++
T Consensus 25 m~~~~mkI~VIGaG~mG~alA~~La~~G~~---V~l~~r~~ 62 (356)
T 3k96_A 25 MEPFKHPIAILGAGSWGTALALVLARKGQK---VRLWSYES 62 (356)
T ss_dssp --CCCSCEEEECCSHHHHHHHHHHHTTTCC---EEEECSCH
T ss_pred ccccCCeEEEECccHHHHHHHHHHHHCCCe---EEEEeCCH
Confidence 333457999999999999999999999986 99999874
No 408
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=92.45 E-value=0.13 Score=51.96 Aligned_cols=60 Identities=18% Similarity=0.214 Sum_probs=45.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcc-----------------cCHHHHHHHHHHHHhcCcEEE
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRL-----------------FTADIAAFYEGYYANKGIKII 250 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~-----------------~~~~~~~~~~~~l~~~GV~v~ 250 (461)
..+|+|||+|..|+-+|..|++.|.+|+++++.+++.... +... ...+.+.+++.|++..
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~-~~~~~~l~~~lgl~~~ 80 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPT-QNRILRLAKELGLETY 80 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTT-CHHHHHHHHHTTCCEE
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCC-cHHHHHHHHHcCCcce
Confidence 4579999999999999999999999999999987763221 0111 3455677888888764
No 409
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=92.44 E-value=0.12 Score=49.65 Aligned_cols=34 Identities=24% Similarity=0.493 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCC
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEP 223 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~ 223 (461)
...|+|||+|.+|+.+|..|++.|.+|+++++..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 3579999999999999999999999999999874
No 410
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=92.41 E-value=0.13 Score=48.50 Aligned_cols=40 Identities=25% Similarity=0.393 Sum_probs=33.2
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
|++...+|.|||+|..|.+.|..|+..++ ..+|+++|.++
T Consensus 1 m~~~~~kI~ViGaG~vG~~~a~~l~~~~~-~~~l~l~D~~~ 40 (326)
T 3pqe_A 1 MNKHVNKVALIGAGFVGSSYAFALINQGI-TDELVVIDVNK 40 (326)
T ss_dssp -CCSCCEEEEECCSHHHHHHHHHHHHHTC-CSEEEEECSCH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHhCCC-CceEEEEecch
Confidence 66667899999999999999999999886 23599999863
No 411
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=92.41 E-value=0.09 Score=52.82 Aligned_cols=36 Identities=19% Similarity=0.180 Sum_probs=31.9
Q ss_pred cEEEECCCHHHHHHHHHHHH-CCCcEEEEccCCccCC
Q 012545 192 KAVVVGGGYIGLELSAALKI-NNIDVSMVYPEPWCMP 227 (461)
Q Consensus 192 ~v~VvG~G~~g~e~a~~l~~-~g~~Vtli~~~~~~~~ 227 (461)
.|+|||+|.+|+-+|..|++ .|.+|+++++.+++..
T Consensus 12 DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG 48 (513)
T 4gde_A 12 DVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGG 48 (513)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCG
T ss_pred CEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcC
Confidence 69999999999999999987 5999999999877543
No 412
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=92.35 E-value=0.12 Score=52.10 Aligned_cols=36 Identities=22% Similarity=0.414 Sum_probs=32.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC-CcEEEEccCCcc
Q 012545 190 NGKAVVVGGGYIGLELSAALKINN-IDVSMVYPEPWC 225 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g-~~Vtli~~~~~~ 225 (461)
..+|+|||+|..|+-+|..|.+.| .+|+++++.+++
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~ri 44 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRV 44 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCC
Confidence 357999999999999999999999 999999988754
No 413
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=92.28 E-value=0.47 Score=38.37 Aligned_cols=77 Identities=17% Similarity=0.233 Sum_probs=50.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEE
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEV 269 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v 269 (461)
.++++|+|.|..|..+|..|.+.|.+|+++++. ++..+ .+++.|+.++.+.. ... .+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~---------~~~~~----~~~~~g~~~i~gd~--------~~~--~~ 63 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETS---------RTRVD----ELRERGVRAVLGNA--------ANE--EI 63 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESC---------HHHHH----HHHHTTCEEEESCT--------TSH--HH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECC---------HHHHH----HHHHcCCCEEECCC--------CCH--HH
Confidence 468999999999999999999999999999863 33322 33456776653311 000 00
Q ss_pred EeCCCcEEecCEEEEccCCCC
Q 012545 270 KLKDGRTLEADIVVVGVGGRP 290 (461)
Q Consensus 270 ~~~~G~~i~aD~vi~a~G~~p 290 (461)
...-+ .-.+|.||++++...
T Consensus 64 l~~a~-i~~ad~vi~~~~~~~ 83 (140)
T 3fwz_A 64 MQLAH-LECAKWLILTIPNGY 83 (140)
T ss_dssp HHHTT-GGGCSEEEECCSCHH
T ss_pred HHhcC-cccCCEEEEECCChH
Confidence 00001 126899999998654
No 414
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=92.26 E-value=0.15 Score=47.54 Aligned_cols=34 Identities=18% Similarity=0.331 Sum_probs=30.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
.++|.|||+|.-|...|..|++.|++ |+++|+++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~---V~~~d~~~ 48 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHT---VVLVDQTE 48 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCe---EEEEECCH
Confidence 46899999999999999999999986 99999874
No 415
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=92.22 E-value=0.13 Score=49.37 Aligned_cols=35 Identities=20% Similarity=0.189 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCcc
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 225 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 225 (461)
.++|+|||+|.+|+-+|..|+ .|.+|+++++.+.+
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~ 43 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQP 43 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSST
T ss_pred cCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCc
Confidence 578999999999999999999 69999999998654
No 416
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=92.22 E-value=0.1 Score=48.47 Aligned_cols=35 Identities=11% Similarity=0.077 Sum_probs=31.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
+.++|.|||.|.-|...|..|++.|++ |+++++++
T Consensus 14 ~~~~I~vIG~G~mG~~~A~~l~~~G~~---V~~~dr~~ 48 (296)
T 3qha_A 14 EQLKLGYIGLGNMGAPMATRMTEWPGG---VTVYDIRI 48 (296)
T ss_dssp -CCCEEEECCSTTHHHHHHHHTTSTTC---EEEECSST
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCe---EEEEeCCH
Confidence 357899999999999999999999986 99999875
No 417
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=92.15 E-value=0.16 Score=48.13 Aligned_cols=34 Identities=15% Similarity=0.206 Sum_probs=30.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCC-CCCcEEEEeCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGV-KPGELAIISKEA 41 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~-~~~~V~vie~~~ 41 (461)
.++|+|||+|..|.+.|..|+..|+ + |+++|.++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~---V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELAD---VVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCE---EEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCe---EEEEECCh
Confidence 4699999999999999999999887 4 99999874
No 418
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=92.04 E-value=0.13 Score=49.03 Aligned_cols=34 Identities=26% Similarity=0.416 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCC
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEP 223 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~ 223 (461)
...|+|||+|.+|+-+|..|++.|.+|+++++..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 3579999999999999999999999999999753
No 419
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=92.03 E-value=0.15 Score=50.82 Aligned_cols=36 Identities=25% Similarity=0.394 Sum_probs=32.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCcc
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 225 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 225 (461)
..+|+|||+|..|+-+|..|++.|.+|+++++.+++
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~ 51 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARL 51 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCC
Confidence 568999999999999999999999999999998764
No 420
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=92.00 E-value=0.17 Score=50.81 Aligned_cols=77 Identities=18% Similarity=0.168 Sum_probs=56.5
Q ss_pred CCCcEEEECCCHHHHH-HHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEE
Q 012545 189 KNGKAVVVGGGYIGLE-LSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVK 267 (461)
Q Consensus 189 ~~~~v~VvG~G~~g~e-~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~ 267 (461)
..+++.|+|-|-+|+- +|..|.++|.+|+..+... .+ ..+.|++.|++++.+... +.
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~-------~~-----~~~~l~~~gi~~~~g~~~-------~~--- 78 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP-------NS-----VTQHLTALGAQIYFHHRP-------EN--- 78 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC-------CH-----HHHHHHHTTCEEESSCCG-------GG---
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCC-------CH-----HHHHHHHCCCEEECCCCH-------HH---
Confidence 3589999999999996 7999999999999987642 11 234678889998865321 10
Q ss_pred EEEeCCCcEEecCEEEEccCCCCChhhh
Q 012545 268 EVKLKDGRTLEADIVVVGVGGRPLISLF 295 (461)
Q Consensus 268 ~v~~~~G~~i~aD~vi~a~G~~p~~~~~ 295 (461)
+ -.+|.||+++|..+..+.+
T Consensus 79 ---~-----~~~d~vV~Spgi~~~~p~~ 98 (494)
T 4hv4_A 79 ---V-----LDASVVVVSTAISADNPEI 98 (494)
T ss_dssp ---G-----TTCSEEEECTTSCTTCHHH
T ss_pred ---c-----CCCCEEEECCCCCCCCHHH
Confidence 0 1379999999988866544
No 421
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=91.99 E-value=0.056 Score=53.43 Aligned_cols=78 Identities=13% Similarity=0.143 Sum_probs=55.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEE
Q 012545 189 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKE 268 (461)
Q Consensus 189 ~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~ 268 (461)
.+++|+|+|.|.+|+..|..|.++|.+|+..+....... . ..|+ .|+++..++.. . + .
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~---~--------~~l~-~G~~~~~g~~~----~--~----~ 61 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPG---L--------DKLP-EAVERHTGSLN----D--E----W 61 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTT---G--------GGSC-TTSCEEESSCC----H--H----H
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcch---h--------HHhh-CCCEEEECCCc----H--H----H
Confidence 468999999999999999999999999999987654211 1 3345 68887655421 0 0 0
Q ss_pred EEeCCCcEEecCEEEEccCCCCChhhh
Q 012545 269 VKLKDGRTLEADIVVVGVGGRPLISLF 295 (461)
Q Consensus 269 v~~~~G~~i~aD~vi~a~G~~p~~~~~ 295 (461)
+ . .+|.||+++|..|..+.+
T Consensus 62 ~------~-~~d~vV~s~gi~~~~p~~ 81 (439)
T 2x5o_A 62 L------M-AADLIVASPGIALAHPSL 81 (439)
T ss_dssp H------H-TCSEEEECTTSCTTCHHH
T ss_pred h------c-cCCEEEeCCCCCCCCHHH
Confidence 0 1 478999999987765543
No 422
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=91.96 E-value=0.099 Score=46.26 Aligned_cols=35 Identities=23% Similarity=0.345 Sum_probs=29.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEE-EeCCC
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAI-ISKEA 41 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~v-ie~~~ 41 (461)
++++|.|||+|.-|.+.|..|.+.|++ |++ +++++
T Consensus 22 ~mmkI~IIG~G~mG~~la~~l~~~g~~---V~~v~~r~~ 57 (220)
T 4huj_A 22 SMTTYAIIGAGAIGSALAERFTAAQIP---AIIANSRGP 57 (220)
T ss_dssp GSCCEEEEECHHHHHHHHHHHHHTTCC---EEEECTTCG
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCE---EEEEECCCH
Confidence 356899999999999999999998876 888 77663
No 423
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=91.82 E-value=0.13 Score=50.74 Aligned_cols=36 Identities=19% Similarity=0.290 Sum_probs=31.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~ 42 (461)
+.++|+|||.|.+|+++|..|.++|++ |++.|....
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~~G~~---v~~~D~~~~ 39 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLARGVT---PRVMDTRMT 39 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHTTTCC---CEEEESSSS
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCE---EEEEECCCC
Confidence 356899999999999999999999987 999998753
No 424
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=91.78 E-value=0.18 Score=47.51 Aligned_cols=36 Identities=17% Similarity=0.330 Sum_probs=31.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
..++|.|||+|..|...|..|+..|+- +|+++|.++
T Consensus 3 ~~~kI~VIGaG~vG~~ia~~la~~g~~--~v~L~Di~~ 38 (322)
T 1t2d_A 3 PKAKIVLVGSGMIGGVMATLIVQKNLG--DVVLFDIVK 38 (322)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCC--EEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCC--eEEEEeCCH
Confidence 456999999999999999999998872 299999874
No 425
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=91.77 E-value=0.2 Score=46.87 Aligned_cols=37 Identities=19% Similarity=0.227 Sum_probs=31.8
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 2 m~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
|+..++|.|||+|.-|...|..|.+.|++ |+++++++
T Consensus 27 ~~~~~~I~iIG~G~mG~~~a~~l~~~g~~---V~~~~~~~ 63 (316)
T 2uyy_A 27 TPTDKKIGFLGLGLMGSGIVSNLLKMGHT---VTVWNRTA 63 (316)
T ss_dssp CCCSSCEEEECCSHHHHHHHHHHHHTTCC---EEEECSSG
T ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCE---EEEEeCCH
Confidence 33457899999999999999999998876 99998874
No 426
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=91.75 E-value=0.24 Score=40.79 Aligned_cols=33 Identities=12% Similarity=0.214 Sum_probs=30.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccC
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPE 222 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~ 222 (461)
.++++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 578999999999999999999999999999864
No 427
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=91.66 E-value=0.19 Score=50.20 Aligned_cols=38 Identities=18% Similarity=0.224 Sum_probs=32.2
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
|+|+.++|.|||+|.-|...|..|++.|++ |+++|+++
T Consensus 1 Msm~~~kVgVIGaG~MG~~IA~~la~aG~~---V~l~D~~~ 38 (483)
T 3mog_A 1 MSLNVQTVAVIGSGTMGAGIAEVAASHGHQ---VLLYDISA 38 (483)
T ss_dssp ---CCCCEEEECCSHHHHHHHHHHHHTTCC---EEEECSCH
T ss_pred CCCCCCEEEEECcCHHHHHHHHHHHHCCCe---EEEEECCH
Confidence 554567999999999999999999999987 99999875
No 428
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=91.61 E-value=0.26 Score=48.96 Aligned_cols=37 Identities=22% Similarity=0.395 Sum_probs=32.2
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 012545 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (461)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~ 43 (461)
+||+|||||++||+||++|++.|. ..+|+|+|+++..
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~-~~~V~vlEa~~~~ 39 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPC-PPKVVLVESSERL 39 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSS-CCEEEEECSSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCC-CCcEEEEeCCCCC
Confidence 699999999999999999999987 1239999998753
No 429
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=91.60 E-value=0.16 Score=48.64 Aligned_cols=35 Identities=20% Similarity=0.383 Sum_probs=31.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
.-+|||+|+|.||+.+|..|...|.+ +|+++|+..
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~--~I~v~D~~G 222 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGAT--KVTVVDKFG 222 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCC--EEEEEETTE
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCC--eEEEEECCC
Confidence 46899999999999999999999974 399999984
No 430
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=91.60 E-value=0.093 Score=48.01 Aligned_cols=35 Identities=23% Similarity=0.407 Sum_probs=31.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
+.++|+|||||..|...+..|.+.|.+ |+|++++.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~---VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCK---LTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCE---EEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCE---EEEEcCCC
Confidence 458999999999999999999999977 99999874
No 431
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=91.50 E-value=0.1 Score=51.59 Aligned_cols=37 Identities=22% Similarity=0.450 Sum_probs=33.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC------CcEEEEccCCccC
Q 012545 190 NGKAVVVGGGYIGLELSAALKINN------IDVSMVYPEPWCM 226 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g------~~Vtli~~~~~~~ 226 (461)
..+|+|||+|.+|+-+|..|++.| .+|+++++.+++.
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~G 47 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVG 47 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCC
Confidence 357999999999999999999999 9999999987653
No 432
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=91.45 E-value=0.2 Score=50.26 Aligned_cols=37 Identities=27% Similarity=0.399 Sum_probs=34.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccC
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM 226 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~ 226 (461)
..+|+|||+|..|+-+|..|++.|.+|+++++.+++.
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~G 49 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAG 49 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCC
Confidence 4689999999999999999999999999999988754
No 433
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=91.42 E-value=0.2 Score=49.39 Aligned_cols=35 Identities=23% Similarity=0.396 Sum_probs=32.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCcc
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 225 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 225 (461)
.+|+|||+|..|+-+|..|++.|.+|+++++.+++
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 40 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRV 40 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 47999999999999999999999999999988765
No 434
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=91.42 E-value=0.17 Score=48.90 Aligned_cols=34 Identities=18% Similarity=0.247 Sum_probs=31.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
..+|+|||+|.+|+.+|..+...|.+ |+++|+.+
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~---V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAV---VSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCE---EEEEcCCH
Confidence 46899999999999999999999975 99999885
No 435
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=91.33 E-value=0.17 Score=48.91 Aligned_cols=36 Identities=19% Similarity=0.311 Sum_probs=32.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccC
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM 226 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~ 226 (461)
.+++|||+|.+|+.+|..|.+.|.+|+++++.+++.
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIG 39 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcC
Confidence 479999999999999999999999999999887653
No 436
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=91.29 E-value=0.2 Score=47.85 Aligned_cols=35 Identities=20% Similarity=0.305 Sum_probs=31.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
..+|||+|+|.+|..+|..|...|.+ +|+++|+..
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~~--~I~v~Dr~G 226 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGVK--NVVAVDRKG 226 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCC--EEEEEETTE
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCC--eEEEEECCC
Confidence 56899999999999999999999974 399999984
No 437
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=91.27 E-value=0.31 Score=45.61 Aligned_cols=83 Identities=20% Similarity=0.231 Sum_probs=52.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEE
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVK 270 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~ 270 (461)
.+|.|+|+|.+|.-+|..|.+.|.+|+++.|.+ . +.+++.|+++.....-..+.. ..+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--------------~-~~i~~~g~~~~~~~g~~~~~~------~~~~ 61 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD--------------Y-EAIAGNGLKVFSINGDFTLPH------VKGY 61 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT--------------H-HHHHHTCEEEEETTCCEEESC------CCEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc--------------H-HHHHhCCCEEEcCCCeEEEee------ceee
Confidence 479999999999999999999999999987732 0 345667877653211001100 0111
Q ss_pred eCCCc-EEecCEEEEccCCCCChhhh
Q 012545 271 LKDGR-TLEADIVVVGVGGRPLISLF 295 (461)
Q Consensus 271 ~~~G~-~i~aD~vi~a~G~~p~~~~~ 295 (461)
.+-+ .-.+|.||+|+-.....+.+
T Consensus 62 -~~~~~~~~~D~vilavk~~~~~~~l 86 (312)
T 3hn2_A 62 -RAPEEIGPMDLVLVGLKTFANSRYE 86 (312)
T ss_dssp -SCHHHHCCCSEEEECCCGGGGGGHH
T ss_pred -cCHHHcCCCCEEEEecCCCCcHHHH
Confidence 1111 12689999998766544444
No 438
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=91.25 E-value=0.22 Score=48.87 Aligned_cols=36 Identities=22% Similarity=0.349 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEccCCcc
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNI-DVSMVYPEPWC 225 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~-~Vtli~~~~~~ 225 (461)
...|+|||+|..|+-+|..|++.|. +|+++++.+..
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~~ 42 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVP 42 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCCC
Confidence 3579999999999999999999999 99999987653
No 439
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=91.19 E-value=0.21 Score=48.50 Aligned_cols=36 Identities=25% Similarity=0.348 Sum_probs=32.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCcc
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 225 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 225 (461)
..+++|||+|..|+-+|..|++.|.+|+++++.+++
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHI 64 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCC
Confidence 347999999999999999999999999999988764
No 440
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=91.16 E-value=0.2 Score=47.92 Aligned_cols=37 Identities=16% Similarity=0.181 Sum_probs=31.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 2 m~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
|++.++|.|||.|.-|...|..|++.|++ |+++++++
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~---V~v~dr~~ 55 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKGGHE---CVVYDLNV 55 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSCH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhCCCE---EEEEeCCH
Confidence 44568999999999999999999999986 99999874
No 441
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=91.12 E-value=0.16 Score=49.18 Aligned_cols=33 Identities=27% Similarity=0.320 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHH-CC-CcEEEEccCC
Q 012545 191 GKAVVVGGGYIGLELSAALKI-NN-IDVSMVYPEP 223 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~-~g-~~Vtli~~~~ 223 (461)
..|+|||+|..|+.+|..|++ .| .+|+++++.+
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 479999999999999999999 89 9999999876
No 442
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=90.89 E-value=0.22 Score=48.36 Aligned_cols=36 Identities=22% Similarity=0.402 Sum_probs=32.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC-CCcEEEEccCCcc
Q 012545 190 NGKAVVVGGGYIGLELSAALKIN-NIDVSMVYPEPWC 225 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~-g~~Vtli~~~~~~ 225 (461)
..+++|||+|..|+-+|..|++. |.+|+++++.+++
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHI 43 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 45799999999999999999998 9999999988764
No 443
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=90.89 E-value=0.23 Score=40.12 Aligned_cols=32 Identities=22% Similarity=0.215 Sum_probs=29.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcc
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYP 221 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~ 221 (461)
.++++|+|+|.+|..++..|.+.|.+|+++++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~ 37 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDK 37 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEC
Confidence 46899999999999999999999999999986
No 444
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=90.77 E-value=0.2 Score=46.91 Aligned_cols=36 Identities=22% Similarity=0.402 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCcc
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 225 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 225 (461)
.++|+|||+|..|..+|..++..|.+|++++..+..
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~ 41 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQ 41 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence 578999999999999999999999999999876543
No 445
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=90.77 E-value=0.23 Score=50.55 Aligned_cols=35 Identities=23% Similarity=0.365 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHH---CCCcEEEEccCCc
Q 012545 190 NGKAVVVGGGYIGLELSAALKI---NNIDVSMVYPEPW 224 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~---~g~~Vtli~~~~~ 224 (461)
..+|+|||+|..|+-+|..|++ .|.+|+++++.+.
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 62 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDI 62 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCC
Confidence 5689999999999999999999 9999999998653
No 446
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=90.73 E-value=0.72 Score=43.19 Aligned_cols=85 Identities=16% Similarity=0.206 Sum_probs=50.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEE
Q 012545 189 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKE 268 (461)
Q Consensus 189 ~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~ 268 (461)
...+|.|+|+|.+|.-+|..|.+.|.+|+++ +.+ +-. +.+++.|+++.... . .+.. . ..
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~---------~~~----~~i~~~g~~~~~~~-~-~~~~---~--~~ 76 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP---------QHV----QAIEATGLRLETQS-F-DEQV---K--VS 76 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH---------HHH----HHHHHHCEEEECSS-C-EEEE---C--CE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH---------hHH----HHHHhCCeEEEcCC-C-cEEE---e--ee
Confidence 4678999999999999999999999999987 421 111 33445677665221 1 1111 0 01
Q ss_pred EEeCCCcE-EecCEEEEccCCCCChhhh
Q 012545 269 VKLKDGRT-LEADIVVVGVGGRPLISLF 295 (461)
Q Consensus 269 v~~~~G~~-i~aD~vi~a~G~~p~~~~~ 295 (461)
+. .+-.. -.+|+||+|+......+.+
T Consensus 77 ~~-~~~~~~~~~D~vilavk~~~~~~~l 103 (318)
T 3hwr_A 77 AS-SDPSAVQGADLVLFCVKSTDTQSAA 103 (318)
T ss_dssp EE-SCGGGGTTCSEEEECCCGGGHHHHH
T ss_pred ee-CCHHHcCCCCEEEEEcccccHHHHH
Confidence 11 22111 2589999998765433333
No 447
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=90.70 E-value=0.26 Score=46.59 Aligned_cols=33 Identities=21% Similarity=0.487 Sum_probs=29.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~ 40 (461)
.++|.|||+|.-|...|..|++.|++ |++++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~---V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEA---INVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCC---EEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCE---EEEEECh
Confidence 46899999999999999999999876 9999975
No 448
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=90.59 E-value=0.22 Score=47.68 Aligned_cols=34 Identities=21% Similarity=0.160 Sum_probs=31.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
..+|+|||+|..|+.+|..|...|.+ |+++|+.+
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~---V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAK---TTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCE---EEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCE---EEEEeCCH
Confidence 46899999999999999999999975 99999884
No 449
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=90.58 E-value=0.24 Score=51.97 Aligned_cols=36 Identities=17% Similarity=0.257 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCcc
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 225 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 225 (461)
...|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~ 299 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQP 299 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSST
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCcc
Confidence 358999999999999999999999999999986543
No 450
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=90.58 E-value=0.24 Score=46.51 Aligned_cols=33 Identities=18% Similarity=0.449 Sum_probs=29.9
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
++|.|||+|.-|.+.|..|++.|++ |+++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~---V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHC---VSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCE---EEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCe---EEEEeCCh
Confidence 5899999999999999999998875 99999873
No 451
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=90.42 E-value=0.3 Score=46.64 Aligned_cols=35 Identities=26% Similarity=0.310 Sum_probs=31.6
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 012545 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (461)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~~ 43 (461)
++|+|||||.-|..++..++++|++ |+++|.++..
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~---vv~vd~~~~~ 36 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMK---VVLVDKNPQA 36 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE---EEEEESCTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCE---EEEEeCCCCC
Confidence 5899999999999999999999998 9999988653
No 452
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=90.39 E-value=0.24 Score=51.80 Aligned_cols=34 Identities=26% Similarity=0.347 Sum_probs=31.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCc
Q 012545 191 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW 224 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~ 224 (461)
..|+|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~ 306 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLRRGWQVTLYCADEA 306 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 5899999999999999999999999999998644
No 453
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=90.37 E-value=0.32 Score=49.14 Aligned_cols=79 Identities=14% Similarity=0.125 Sum_probs=56.9
Q ss_pred CCCcEEEECCCHHHHH-HHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEE
Q 012545 189 KNGKAVVVGGGYIGLE-LSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVK 267 (461)
Q Consensus 189 ~~~~v~VvG~G~~g~e-~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~ 267 (461)
+.+++.+||-|-+|+- +|..|.++|.+|+..+.... ++ ..+.|++.|++++.+.....+
T Consensus 18 ~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~------~~-----~~~~L~~~gi~~~~G~~~~~~--------- 77 (524)
T 3hn7_A 18 QGMHIHILGICGTFMGSLALLARALGHTVTGSDANIY------PP-----MSTQLEQAGVTIEEGYLIAHL--------- 77 (524)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC------TT-----HHHHHHHTTCEEEESCCGGGG---------
T ss_pred cCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCC------cH-----HHHHHHHCCCEEECCCCHHHc---------
Confidence 5789999999999997 58889999999999887542 11 235677889988755321100
Q ss_pred EEEeCCCcEEecCEEEEccCCCCChhhh
Q 012545 268 EVKLKDGRTLEADIVVVGVGGRPLISLF 295 (461)
Q Consensus 268 ~v~~~~G~~i~aD~vi~a~G~~p~~~~~ 295 (461)
.-.+|.||+.+|..+..+.+
T Consensus 78 --------~~~~d~vV~Spgi~~~~p~l 97 (524)
T 3hn7_A 78 --------QPAPDLVVVGNAMKRGMDVI 97 (524)
T ss_dssp --------CSCCSEEEECTTCCTTSHHH
T ss_pred --------CCCCCEEEECCCcCCCCHHH
Confidence 01479999999988876654
No 454
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=90.21 E-value=0.24 Score=47.49 Aligned_cols=34 Identities=24% Similarity=0.295 Sum_probs=31.2
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEccCCcc
Q 012545 192 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 225 (461)
Q Consensus 192 ~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 225 (461)
+++|||+|..|+-+|..|++.|.+|+++++.+++
T Consensus 3 ~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 3 DYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHI 36 (367)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCC
Confidence 5899999999999999999999999999987654
No 455
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=90.17 E-value=0.42 Score=45.17 Aligned_cols=78 Identities=22% Similarity=0.284 Sum_probs=49.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEE
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEV 269 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v 269 (461)
..+|.|||+|.+|.-+|..|.+.|.+|+++.|. +. .+.+++.|+.+.... . .... . ..+
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~---------~~-----~~~~~~~g~~~~~~~-~-~~~~--~---~~~ 61 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG---------AT-----LQALQTAGLRLTEDG-A-THTL--P---VRA 61 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH---------HH-----HHHHHHTCEEEEETT-E-EEEE--C---CEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh---------HH-----HHHHHHCCCEEecCC-C-eEEE--e---eeE
Confidence 358999999999999999999999999998752 11 134566788765321 1 1111 0 011
Q ss_pred EeCCCc-EEecCEEEEccCCC
Q 012545 270 KLKDGR-TLEADIVVVGVGGR 289 (461)
Q Consensus 270 ~~~~G~-~i~aD~vi~a~G~~ 289 (461)
. .+-. .-.+|.||+|+...
T Consensus 62 ~-~~~~~~~~~D~Vilavk~~ 81 (335)
T 3ghy_A 62 T-HDAAALGEQDVVIVAVKAP 81 (335)
T ss_dssp E-SCHHHHCCCSEEEECCCHH
T ss_pred E-CCHHHcCCCCEEEEeCCch
Confidence 1 1211 13589999998753
No 456
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=90.06 E-value=0.18 Score=47.82 Aligned_cols=32 Identities=25% Similarity=0.456 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHHHHHCC------CcEEEEccCC
Q 012545 192 KAVVVGGGYIGLELSAALKINN------IDVSMVYPEP 223 (461)
Q Consensus 192 ~v~VvG~G~~g~e~a~~l~~~g------~~Vtli~~~~ 223 (461)
.|+|||+|.+|+-+|..|++.| .+|+++++..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 6899999999999999999998 8999999874
No 457
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=90.05 E-value=0.28 Score=45.91 Aligned_cols=32 Identities=16% Similarity=0.377 Sum_probs=28.9
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCC
Q 012545 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (461)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~ 40 (461)
++|.|||+|.-|.+.|..|++.|.+ |++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~---V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGED---VHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCC---EEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCe---EEEEEcC
Confidence 4799999999999999999999876 9999986
No 458
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=90.03 E-value=0.28 Score=45.68 Aligned_cols=33 Identities=18% Similarity=0.276 Sum_probs=29.7
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
++|.|||+|.-|...|..|.+.|++ |+++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~---V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGND---VTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE---EEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCc---EEEEECCH
Confidence 4899999999999999999998875 99998863
No 459
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=89.88 E-value=0.28 Score=45.45 Aligned_cols=33 Identities=21% Similarity=0.298 Sum_probs=29.8
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
++|.|||+|.-|.+.|..|.+.|.+ |+++++++
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~---V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPH---TTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTT---CEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCe---EEEEEecc
Confidence 4799999999999999999999875 99999874
No 460
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=89.87 E-value=0.21 Score=46.67 Aligned_cols=36 Identities=25% Similarity=0.498 Sum_probs=29.2
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHHc-----C-CCCCcEEEEeC
Q 012545 1 MAEKSFKYVILGGGVSAGYAAREFAKQ-----G-VKPGELAIISK 39 (461)
Q Consensus 1 Mm~~~~dvvIIG~G~aGl~aA~~L~~~-----g-~~~~~V~vie~ 39 (461)
|..++++|.|||+|.-|...|..|.+. | ++ |+++++
T Consensus 4 m~~~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~---V~~~~r 45 (317)
T 2qyt_A 4 MNQQPIKIAVFGLGGVGGYYGAMLALRAAATDGLLE---VSWIAR 45 (317)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEE---EEEECC
T ss_pred CCCCCCEEEEECcCHHHHHHHHHHHhCccccCCCCC---EEEEEc
Confidence 333446899999999999999999998 7 65 999987
No 461
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=89.85 E-value=0.3 Score=44.05 Aligned_cols=36 Identities=25% Similarity=0.345 Sum_probs=31.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~ 42 (461)
..+|+|||+|-.|..+|..|++.|.. +|+|+|++..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~--~i~lvD~d~v 66 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVG--NLTLLDFDTV 66 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCS--EEEEECCCBC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCC--eEEEEcCCCc
Confidence 36899999999999999999999974 3999999853
No 462
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=89.78 E-value=0.39 Score=38.45 Aligned_cols=32 Identities=19% Similarity=0.317 Sum_probs=28.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcc
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYP 221 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~ 221 (461)
..+++|+|+|.+|..++..|.+.|.+|+++++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEC
Confidence 35799999999999999999999999999876
No 463
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=89.78 E-value=0.3 Score=45.93 Aligned_cols=40 Identities=23% Similarity=0.210 Sum_probs=30.1
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHHcCCC-CCcEEEEeCCC
Q 012545 2 AEKSFKYVILGGGVSAGYAAREFAKQGVK-PGELAIISKEA 41 (461)
Q Consensus 2 m~~~~dvvIIG~G~aGl~aA~~L~~~g~~-~~~V~vie~~~ 41 (461)
|++.++|.|||+|.-|.+.|..|.+.|.. ..+|+++++++
T Consensus 19 ~~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 19 YFQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp ---CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 34456899999999999999999998831 12399998773
No 464
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=89.76 E-value=0.24 Score=49.22 Aligned_cols=35 Identities=20% Similarity=0.372 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC--CcEEEEccCCc
Q 012545 190 NGKAVVVGGGYIGLELSAALKINN--IDVSMVYPEPW 224 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g--~~Vtli~~~~~ 224 (461)
..+|+|||+|.+|+-+|..|.+.| .+|+++++.++
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~ 40 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGER 40 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 357999999999999999999999 99999998654
No 465
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=89.72 E-value=0.3 Score=45.84 Aligned_cols=35 Identities=11% Similarity=-0.014 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC-CcEEEEccCCc
Q 012545 190 NGKAVVVGGGYIGLELSAALKINN-IDVSMVYPEPW 224 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g-~~Vtli~~~~~ 224 (461)
..+|.|||.|..|.-+|..|.+.| .+|+++++.+.
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~ 59 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFN 59 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 357999999999999999999999 99999987653
No 466
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=89.66 E-value=0.26 Score=48.96 Aligned_cols=36 Identities=25% Similarity=0.117 Sum_probs=32.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHc-CC-CCCcEEEEeCCCC
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQ-GV-KPGELAIISKEAV 42 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~-g~-~~~~V~vie~~~~ 42 (461)
..++|.|||+|.-|+..|..|++. |+ + |+++|.++.
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~---V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEK---VLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCE---EEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCe---EEEEECChh
Confidence 356899999999999999999999 88 6 999999864
No 467
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=89.64 E-value=0.35 Score=50.44 Aligned_cols=37 Identities=27% Similarity=0.512 Sum_probs=33.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCcc
Q 012545 189 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 225 (461)
Q Consensus 189 ~~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 225 (461)
..++|+|||+|..|+.+|..|.+.|.+|+++++.+++
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~ 142 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 142 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 3678999999999999999999999999999987654
No 468
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=89.60 E-value=0.38 Score=51.52 Aligned_cols=36 Identities=25% Similarity=0.496 Sum_probs=32.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccCCcc
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 225 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 225 (461)
.++|+|||+|..|+.+|..|.+.|.+|+++++.+++
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~ 313 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 313 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcC
Confidence 468999999999999999999999999999987654
No 469
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=89.46 E-value=0.24 Score=49.19 Aligned_cols=41 Identities=24% Similarity=0.340 Sum_probs=28.1
Q ss_pred CCCCCCeEEEEcCChH-HHHHHHHHHHc--CCCCCcEEEEeCCC
Q 012545 1 MAEKSFKYVILGGGVS-AGYAAREFAKQ--GVKPGELAIISKEA 41 (461)
Q Consensus 1 Mm~~~~dvvIIG~G~a-Gl~aA~~L~~~--g~~~~~V~vie~~~ 41 (461)
|||++++|+|||||.. |.+.|..|.+. +++..+|+|+|.++
T Consensus 24 m~m~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~ 67 (472)
T 1u8x_X 24 MKKKSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDK 67 (472)
T ss_dssp --CCCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCH
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCH
Confidence 5555679999999986 33345567776 55344699999874
No 470
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=89.45 E-value=0.33 Score=45.42 Aligned_cols=36 Identities=19% Similarity=0.315 Sum_probs=30.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
.++|+|||+|..|...|..|++.|+ ..+|+++|+++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~-~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGI-AREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-CSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEeCCh
Confidence 3589999999999999999999886 12499999874
No 471
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=89.43 E-value=0.34 Score=37.45 Aligned_cols=33 Identities=30% Similarity=0.409 Sum_probs=29.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC-CcEEEEccC
Q 012545 190 NGKAVVVGGGYIGLELSAALKINN-IDVSMVYPE 222 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g-~~Vtli~~~ 222 (461)
.++++|+|+|.+|..++..|.+.| .+|+++.+.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 468999999999999999999999 889888763
No 472
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=89.38 E-value=0.4 Score=44.95 Aligned_cols=34 Identities=24% Similarity=0.324 Sum_probs=30.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
.++|.|||+|.-|.+.|..|++.|++ |+++|+++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~---V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFR---VKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCC---EEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCE---EEEEeCCH
Confidence 57899999999999999999999987 99999885
No 473
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=89.31 E-value=0.33 Score=47.39 Aligned_cols=34 Identities=21% Similarity=0.410 Sum_probs=31.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
..+|+|||.|..|...|..|.+.|++ |++||+++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~---vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVK---MVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCC---EEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCC---EEEEECCH
Confidence 46799999999999999999999987 99999985
No 474
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=89.31 E-value=0.45 Score=44.46 Aligned_cols=90 Identities=12% Similarity=0.117 Sum_probs=55.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEE
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNI-DVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKE 268 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~-~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~ 268 (461)
..+|.|||.|..|.-+|..|.+.|. +|+++++.+ +++.. +.+.+.|+....+ . ..
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~-------~~~~~----~~~~~~g~~~~~~-----~----~e---- 79 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAAS-------AESWR----PRAEELGVSCKAS-----V----AE---- 79 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSC-------HHHHH----HHHHHTTCEECSC-----H----HH----
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCC-------CHHHH----HHHHHCCCEEeCC-----H----HH----
Confidence 4689999999999999999999999 999887743 11222 2344556543110 0 00
Q ss_pred EEeCCCcEEecCEEEEccCCCCChhhhhccccc-CCCcEEeC
Q 012545 269 VKLKDGRTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETD 309 (461)
Q Consensus 269 v~~~~G~~i~aD~vi~a~G~~p~~~~~~~~~~~-~~g~i~vd 309 (461)
-.-.+|.||+|+......+.+..-... ..+.+.||
T Consensus 80 ------~~~~aDvVi~~vp~~~~~~~~~~l~~~l~~~~ivvd 115 (312)
T 3qsg_A 80 ------VAGECDVIFSLVTAQAALEVAQQAGPHLCEGALYAD 115 (312)
T ss_dssp ------HHHHCSEEEECSCTTTHHHHHHHHGGGCCTTCEEEE
T ss_pred ------HHhcCCEEEEecCchhHHHHHHhhHhhcCCCCEEEE
Confidence 012589999999877655544322221 34445554
No 475
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=89.28 E-value=0.2 Score=50.35 Aligned_cols=33 Identities=36% Similarity=0.541 Sum_probs=29.5
Q ss_pred CcEEEECCCHHHHHHHHHHHH---CCCcEEEEccCC
Q 012545 191 GKAVVVGGGYIGLELSAALKI---NNIDVSMVYPEP 223 (461)
Q Consensus 191 ~~v~VvG~G~~g~e~a~~l~~---~g~~Vtli~~~~ 223 (461)
.+|+|||+|..|+-+|..|++ .|.+|+++++.+
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 479999999999999999999 999999999865
No 476
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=89.28 E-value=0.46 Score=44.55 Aligned_cols=36 Identities=31% Similarity=0.415 Sum_probs=30.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCC
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~ 40 (461)
+.++|+|||+|..|.+.|..|+..++ ..+|.++|.+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~-~~ei~L~Di~ 40 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSI-VDELVIIDLD 40 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCS-CSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEeCC
Confidence 45799999999999999999998775 3469999976
No 477
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=89.27 E-value=0.4 Score=38.51 Aligned_cols=33 Identities=24% Similarity=0.211 Sum_probs=30.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccC
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPE 222 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~ 222 (461)
.++++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999999999999999999999999988763
No 478
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=89.25 E-value=0.32 Score=45.51 Aligned_cols=34 Identities=21% Similarity=0.289 Sum_probs=29.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCC-CCCcEEEEeCC
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGV-KPGELAIISKE 40 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~-~~~~V~vie~~ 40 (461)
..++|.|||.|.-|...|..|++.|+ + |++++++
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~---V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAID---MAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCE---EEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCe---EEEEcCC
Confidence 35799999999999999999999997 5 9999986
No 479
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=89.16 E-value=0.37 Score=44.78 Aligned_cols=34 Identities=24% Similarity=0.169 Sum_probs=30.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
.++|.|||.|.-|...|..|++.|++ |+++++++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~---V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLS---TWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCe---EEEEECCH
Confidence 56899999999999999999999986 99998874
No 480
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=89.04 E-value=0.31 Score=42.87 Aligned_cols=35 Identities=20% Similarity=0.356 Sum_probs=30.6
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 4 KSFKYVILGG-GVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 4 ~~~dvvIIG~-G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
++++|+|.|| |..|...+..|.+.|++ |+++.+.+
T Consensus 3 ~m~~ilItGatG~iG~~l~~~L~~~g~~---V~~~~r~~ 38 (227)
T 3dhn_A 3 KVKKIVLIGASGFVGSALLNEALNRGFE---VTAVVRHP 38 (227)
T ss_dssp CCCEEEEETCCHHHHHHHHHHHHTTTCE---EEEECSCG
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCE---EEEEEcCc
Confidence 4578999995 99999999999998876 99999884
No 481
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=89.01 E-value=0.5 Score=43.22 Aligned_cols=34 Identities=26% Similarity=0.243 Sum_probs=30.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
+++|+|.|+|..|...+..|.+.|++ |+++.+..
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~---V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHE---VTGLRRSA 36 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCC---EEEEECTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCE---EEEEeCCc
Confidence 45899999999999999999999986 99998874
No 482
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=88.98 E-value=0.45 Score=41.55 Aligned_cols=35 Identities=14% Similarity=0.258 Sum_probs=30.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~ 42 (461)
.++|.|||+|.-|.+.|..|++.|++ |+++++++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~---V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHE---VTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCE---EEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCE---EEEEcCCHH
Confidence 46899999999999999999998876 999998753
No 483
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=88.98 E-value=0.5 Score=46.87 Aligned_cols=37 Identities=22% Similarity=0.408 Sum_probs=31.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCC-CCCcEEEEeCCCC
Q 012545 3 EKSFKYVILGGGVSAGYAAREFAKQGV-KPGELAIISKEAV 42 (461)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~L~~~g~-~~~~V~vie~~~~ 42 (461)
.+.+||+|||||++|+++|..|++.|+ + |+|+|+.+.
T Consensus 2 ~~~~~~~iiG~G~~g~~~a~~l~~~g~~~---v~~~e~~~~ 39 (472)
T 1b37_A 2 TVGPRVIVVGAGMSGISAAKRLSEAGITD---LLILEATDH 39 (472)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHHTTCCC---EEEECSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhcCCCc---eEEEeCCCC
Confidence 357899999999999999999999987 5 999999865
No 484
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=88.90 E-value=0.34 Score=44.86 Aligned_cols=36 Identities=28% Similarity=0.270 Sum_probs=30.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
+++++|.|||+|.-|...|..|.+.|++ |+++++++
T Consensus 2 ~~~~~i~iiG~G~~G~~~a~~l~~~g~~---V~~~~~~~ 37 (301)
T 3cky_A 2 EKSIKIGFIGLGAMGKPMAINLLKEGVT---VYAFDLME 37 (301)
T ss_dssp --CCEEEEECCCTTHHHHHHHHHHTTCE---EEEECSSH
T ss_pred CCCCEEEEECccHHHHHHHHHHHHCCCe---EEEEeCCH
Confidence 3567999999999999999999998875 99998763
No 485
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=88.88 E-value=0.45 Score=47.54 Aligned_cols=36 Identities=19% Similarity=0.147 Sum_probs=32.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC-CcEEEEccCCcc
Q 012545 190 NGKAVVVGGGYIGLELSAALKINN-IDVSMVYPEPWC 225 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g-~~Vtli~~~~~~ 225 (461)
..+++|||+|..|+-+|..|++.| .+|+++++.+++
T Consensus 9 ~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 9 TPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTP 45 (484)
T ss_dssp SCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 468999999999999999999998 799999988764
No 486
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=88.88 E-value=0.35 Score=47.00 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=30.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
..+|+|||+|.+|+.++..++..|.+ |+++|+.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~---V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAI---VRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCE---EEEEcCCH
Confidence 46899999999999999999998875 99999874
No 487
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=88.83 E-value=0.35 Score=48.10 Aligned_cols=35 Identities=14% Similarity=0.299 Sum_probs=30.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHc--CCCCCcEEEEeCCC
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQ--GVKPGELAIISKEA 41 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~--g~~~~~V~vie~~~ 41 (461)
+.++|.|||.|..|+..|..|++. |++ |+++|+++
T Consensus 4 ~~mkI~VIG~G~mG~~lA~~La~~g~G~~---V~~~d~~~ 40 (467)
T 2q3e_A 4 EIKKICCIGAGYVGGPTCSVIAHMCPEIR---VTVVDVNE 40 (467)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSE---EEEECSCH
T ss_pred CccEEEEECCCHHHHHHHHHHHhcCCCCE---EEEEECCH
Confidence 346899999999999999999998 565 99999874
No 488
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=88.82 E-value=0.56 Score=45.11 Aligned_cols=35 Identities=23% Similarity=0.318 Sum_probs=31.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~ 42 (461)
.++|.|||+|.-|...+..+++.|++ |.+++..+.
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~lG~~---viv~d~~~~ 46 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKMGYK---VVVLDPSED 46 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCE---EEEEECCCC
Confidence 57899999999999999999999997 999998764
No 489
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=88.82 E-value=2.7 Score=40.98 Aligned_cols=103 Identities=21% Similarity=0.218 Sum_probs=0.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccC--------CccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEec
Q 012545 190 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPE--------PWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTN 261 (461)
Q Consensus 190 ~~~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~--------~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~ 261 (461)
+.+..|||.|+.|.-+|..|++.|.+|+.+++. ....+- ..+.+.+.+.+.+....+.+-.+..
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi-~epgl~~ll~~~~~~g~l~~ttd~~------- 82 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISI-EEPGLQEVYEEVLSSGKLKVSTTPE------- 82 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSS-CCTTHHHHHHHHHHTTCEEEESSCC-------
T ss_pred CCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCc-CCCCHHHHHHhhcccCceEEeCchh-------
Q ss_pred CCCCEEEEEeCCCcEEecCEEEEccCCCCC-----------hhhhhccccc--CCCcEEeCCCCCCCCCC
Q 012545 262 ADGEVKEVKLKDGRTLEADIVVVGVGGRPL-----------ISLFKGQVAE--NKGGIETDDFFKTSADD 318 (461)
Q Consensus 262 ~~g~~~~v~~~~G~~i~aD~vi~a~G~~p~-----------~~~~~~~~~~--~~g~i~vd~~~~t~~~~ 318 (461)
.||.+|+|++..+. ......++.. ..|.+.|+.. |..|+
T Consensus 83 ----------------~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~S--TV~pg 134 (431)
T 3ojo_A 83 ----------------ASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVES--TIAPK 134 (431)
T ss_dssp ----------------CCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECS--CCCTT
T ss_pred ----------------hCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEec--CCChh
No 490
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=88.77 E-value=0.4 Score=44.90 Aligned_cols=34 Identities=24% Similarity=0.324 Sum_probs=30.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
..+|.|||+|.-|..-|..++..|++ |+|+|.++
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~---V~l~D~~~ 39 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFR---VKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCC---EEEECSCH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCe---EEEEECCH
Confidence 46899999999999999999999998 99999875
No 491
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=88.74 E-value=0.51 Score=44.22 Aligned_cols=38 Identities=26% Similarity=0.373 Sum_probs=32.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCC
Q 012545 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (461)
Q Consensus 2 m~~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~ 40 (461)
|+++++|+|||+|..|.+.|..|...++ ..++.|+|.+
T Consensus 2 ~~~~~KI~IiGaG~vG~~~a~~l~~~~~-~~el~L~Di~ 39 (318)
T 1ez4_A 2 MPNHQKVVLVGDGAVGSSYAFAMAQQGI-AEEFVIVDVV 39 (318)
T ss_dssp BTTBCEEEEECCSHHHHHHHHHHHHHTC-CSEEEEECSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHcCCC-CCEEEEEeCC
Confidence 4456899999999999999999998875 3469999976
No 492
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=88.72 E-value=0.93 Score=42.16 Aligned_cols=72 Identities=26% Similarity=0.365 Sum_probs=0.0
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEccCCccCCcccCHHHHHHHHHHHHhcCcEEEcCCcEEEEEecCCCCEEEEEe
Q 012545 192 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKL 271 (461)
Q Consensus 192 ~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~ 271 (461)
+|+|+|+|.+|.-+|..|. .|.+|+++.| ...-.+.+++.|+.+...... ... .+..
T Consensus 4 kI~IiGaGa~G~~~a~~L~-~g~~V~~~~r-------------~~~~~~~l~~~G~~~~~~~~~--~~~-------~~~~ 60 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLS-LYHDVTVVTR-------------RQEQAAAIQSEGIRLYKGGEE--FRA-------DCSA 60 (307)
T ss_dssp EEEEECCSHHHHHHHHHHH-TTSEEEEECS-------------CHHHHHHHHHHCEEEEETTEE--EEE-------CCEE
T ss_pred EEEEECCCHHHHHHHHHHh-cCCceEEEEC-------------CHHHHHHHHhCCceEecCCCe--ecc-------cccc
Q ss_pred CCCcEEecCEEEEcc
Q 012545 272 KDGRTLEADIVVVGV 286 (461)
Q Consensus 272 ~~G~~i~aD~vi~a~ 286 (461)
.....-.+|.||+|+
T Consensus 61 ~~~~~~~~D~vilav 75 (307)
T 3ego_A 61 DTSINSDFDLLVVTV 75 (307)
T ss_dssp ESSCCSCCSEEEECC
T ss_pred cccccCCCCEEEEEe
No 493
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=88.69 E-value=0.42 Score=43.84 Aligned_cols=32 Identities=22% Similarity=0.229 Sum_probs=29.4
Q ss_pred eEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 7 KYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 7 dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
+|.|||+|.-|...|..|.+.|++ |+++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~---V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHE---VQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCE---EEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCC---EEEEEcCc
Confidence 699999999999999999999875 99999875
No 494
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=88.68 E-value=0.4 Score=47.40 Aligned_cols=33 Identities=21% Similarity=0.325 Sum_probs=30.5
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
++|.|||.|..|+..|..|++.|++ |+++|+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~---V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGAN---VRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE---EEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCE---EEEEECCH
Confidence 5899999999999999999999986 99999874
No 495
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=88.56 E-value=0.45 Score=45.94 Aligned_cols=34 Identities=18% Similarity=0.208 Sum_probs=30.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
..+|+|||+|.+|+.++..++..|.+ |+++|+.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~---V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAV---VMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCE---EEEEeCCH
Confidence 46899999999999999999998875 99999874
No 496
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=88.47 E-value=0.49 Score=44.47 Aligned_cols=38 Identities=18% Similarity=0.244 Sum_probs=32.2
Q ss_pred CCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 1 MAEKSFKYVILGG-GVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 1 Mm~~~~dvvIIG~-G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
||++.+.|+|.|| |..|...+..|.+.|++ |+++++..
T Consensus 1 ~M~~~~~vlVTGatG~iG~~l~~~L~~~G~~---V~~~~r~~ 39 (341)
T 3enk_A 1 SMSTKGTILVTGGAGYIGSHTAVELLAHGYD---VVIADNLV 39 (341)
T ss_dssp -CCSSCEEEEETTTSHHHHHHHHHHHHTTCE---EEEECCCS
T ss_pred CCCCCcEEEEecCCcHHHHHHHHHHHHCCCc---EEEEecCC
Confidence 5666789999995 99999999999999886 99998764
No 497
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=88.31 E-value=0.46 Score=47.81 Aligned_cols=34 Identities=24% Similarity=0.200 Sum_probs=31.5
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEccCCcc
Q 012545 192 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 225 (461)
Q Consensus 192 ~v~VvG~G~~g~e~a~~l~~~g~~Vtli~~~~~~ 225 (461)
.|+|||+|..|+-+|..+++.|.+|+++++.+.+
T Consensus 43 DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~ 76 (510)
T 4at0_A 43 DVVVAGYGIAGVAASIEAARAGADVLVLERTSGW 76 (510)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 6999999999999999999999999999988654
No 498
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=88.31 E-value=0.24 Score=46.46 Aligned_cols=34 Identities=18% Similarity=0.136 Sum_probs=30.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcC-CCCCcEEEEeCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQG-VKPGELAIISKEA 41 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g-~~~~~V~vie~~~ 41 (461)
.++|.|||.|.-|...|..|++.| ++ |+++++++
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~---V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAAR---LAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSE---EEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCe---EEEEeCCC
Confidence 468999999999999999999998 76 99999874
No 499
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=88.14 E-value=0.65 Score=44.82 Aligned_cols=36 Identities=22% Similarity=0.269 Sum_probs=32.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 012545 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (461)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~~ 42 (461)
..++|+|||+|..|..++..+++.|++ |.+++..+.
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~---vi~~d~~~~ 48 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYK---IAVLDPTKN 48 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCE---EEEEeCCCC
Confidence 356899999999999999999999997 999998754
No 500
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=88.11 E-value=0.51 Score=44.03 Aligned_cols=34 Identities=18% Similarity=0.295 Sum_probs=30.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 012545 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (461)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~L~~~g~~~~~V~vie~~~ 41 (461)
+++|.|||.|.-|...|..|++.|++ |+++++++
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~---V~~~dr~~ 54 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFK---VTVWNRTL 54 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSG
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCe---EEEEeCCH
Confidence 46899999999999999999999986 99999874
Done!