BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012546
(461 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UGF|A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis
pdb|3UGF|B Chain B, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis
pdb|3UGG|A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis In Complex With 1-Kestose
pdb|3UGG|B Chain B, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis In Complex With 1-Kestose
pdb|3UGH|A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis In Complex With 6-Kestose
pdb|3UGH|B Chain B, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis In Complex With 6-Kestose
Length = 546
Score = 461 bits (1185), Expect = e-130, Method: Compositional matrix adjust.
Identities = 202/314 (64%), Positives = 257/314 (81%)
Query: 107 YNWTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVS 166
Y W+NA +WQRT+FHFQPE++WM+DP+GP+FYKGWYH FYQYNPD+ VWGN TWGH VS
Sbjct: 8 YPWSNAQLSWQRTAFHFQPERSWMSDPDGPIFYKGWYHFFYQYNPDNPVWGNNTWGHTVS 67
Query: 167 ADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADP 226
DLIHWLYLP+A+ DQWYD+ GV++GSAT LPDG+I+MLYTG T + V++ +LAYPAD
Sbjct: 68 RDLIHWLYLPLALAADQWYDMQGVFSGSATCLPDGRIMMLYTGVTKEMVEMLSLAYPADL 127
Query: 227 SDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQ 286
SDPLL++WVKYPGNP+L P + P +FRD +T W +G WR+ IG+K TGI++VY+
Sbjct: 128 SDPLLVEWVKYPGNPILSAPPGVSPTEFRDASTGWYVSNGTWRIAIGAKYNTTGIAMVYE 187
Query: 287 TTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTK 346
T DFK+++LL+E LHAVP TG+WECVD YPV+ G GL+TS GP +KHVLKAS+D+ +
Sbjct: 188 TKDFKSFKLLEELLHAVPDTGLWECVDLYPVSTTGEKGLETSVNGPKVKHVLKASIDEQQ 247
Query: 347 VDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETD 406
D+YAIGTY+ +KWTPDNPEEDVGIGL++D+G+YYASK+FYDP K+RR+VW W E D
Sbjct: 248 RDYYAIGTYDLGTNKWTPDNPEEDVGIGLRYDWGKYYASKTFYDPKKQRRVVWAWTKELD 307
Query: 407 TESDDLEKGWASVQ 420
+E D EKGWA+VQ
Sbjct: 308 SEVADREKGWANVQ 321
>pdb|2AC1|A Chain A, Crystal Structure Of A Cell-Wall Invertase From
Arabidopsis Thaliana
Length = 541
Score = 345 bits (885), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 171/308 (55%), Positives = 215/308 (69%), Gaps = 5/308 (1%)
Query: 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPI 177
RT FHFQP KNWMNDPNGP+ YKG YHLFYQ+NP AVWGNI W H+ S DLI+W P
Sbjct: 9 RTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPP 68
Query: 178 AMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKY 237
A+ P +DING W+GSATILP+G+ V+LYTG K+ QVQN+A P + SDP L +W K
Sbjct: 69 AIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKS 128
Query: 238 PGNPVLVPP--RHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYEL 295
P NP++ P I FRDPTTAW G D KWR+ IGSKI + G+++ Y + DF +E
Sbjct: 129 PLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEK 188
Query: 296 LDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPG---IKHVLKASLDDTKVDHYAI 352
E LH G+GMWEC DF+PV GS G++TS+ G +KHVLK SLDDTK D+Y I
Sbjct: 189 SPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTI 248
Query: 353 GTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDL 412
GTY+ DK+ PDN + G ++DYG+YYASK+F+D K RRI+WGW NE+ + DD+
Sbjct: 249 GTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDV 308
Query: 413 EKGWASVQ 420
EKGW+ +Q
Sbjct: 309 EKGWSGIQ 316
>pdb|2XQR|A Chain A, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
pdb|2XQR|C Chain C, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
pdb|2XQR|E Chain E, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
pdb|2XQR|G Chain G, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
pdb|2XQR|I Chain I, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
pdb|2XQR|K Chain K, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
Length = 537
Score = 345 bits (885), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 171/309 (55%), Positives = 215/309 (69%), Gaps = 5/309 (1%)
Query: 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPI 177
RT FHFQP KNWMNDPNGP+ YKG YHLFYQ+NP AVWGNI W H+ S DLI+W P
Sbjct: 5 RTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPP 64
Query: 178 AMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKY 237
A+ P +DING W+GSATILP+G+ V+LYTG K+ QVQN+A P + SDP L +W K
Sbjct: 65 AIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKS 124
Query: 238 PGNPVLVPP--RHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYEL 295
P NP++ P I FRDPTTAW G D KWR+ IGSKI + G+++ Y + DF +E
Sbjct: 125 PLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEK 184
Query: 296 LDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPG---IKHVLKASLDDTKVDHYAI 352
E LH G+GMWEC DF+PV GS G++TS+ G +KHVLK SLDDTK D+Y I
Sbjct: 185 SPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTI 244
Query: 353 GTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDL 412
GTY+ DK+ PDN + G ++DYG+YYASK+F+D K RRI+WGW NE+ + DD+
Sbjct: 245 GTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDV 304
Query: 413 EKGWASVQV 421
EKGW+ +Q
Sbjct: 305 EKGWSGIQT 313
>pdb|2OXB|A Chain A, Crystal Structure Of A Cell-Wall Invertase (E203q) From
Arabidopsis Thaliana In Complex With Sucrose
Length = 537
Score = 344 bits (882), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 170/309 (55%), Positives = 215/309 (69%), Gaps = 5/309 (1%)
Query: 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPI 177
RT FHFQP KNWMNDPNGP+ YKG YHLFYQ+NP AVWGNI W H+ S DLI+W P
Sbjct: 5 RTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPP 64
Query: 178 AMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKY 237
A+ P +DING W+GSATILP+G+ V+LYTG K+ QVQN+A P + SDP L +W K
Sbjct: 65 AIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKS 124
Query: 238 PGNPVLVPP--RHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYEL 295
P NP++ P I FRDPTTAW G D KWR+ IGSKI + G+++ Y + DF +E
Sbjct: 125 PLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEK 184
Query: 296 LDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPG---IKHVLKASLDDTKVDHYAI 352
E LH G+GMW+C DF+PV GS G++TS+ G +KHVLK SLDDTK D+Y I
Sbjct: 185 SPEPLHYDDGSGMWQCPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTI 244
Query: 353 GTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDL 412
GTY+ DK+ PDN + G ++DYG+YYASK+F+D K RRI+WGW NE+ + DD+
Sbjct: 245 GTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDV 304
Query: 413 EKGWASVQV 421
EKGW+ +Q
Sbjct: 305 EKGWSGIQT 313
>pdb|2QQV|A Chain A, Crystal Structure Of A Cell-Wall Invertase (E203a) From
Arabidopsis Thaliana In Complex With Sucrose
Length = 537
Score = 343 bits (879), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 170/308 (55%), Positives = 214/308 (69%), Gaps = 5/308 (1%)
Query: 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPI 177
RT FHFQP KNWMNDPNGP+ YKG YHLFYQ+NP AVWGNI W H+ S DLI+W P
Sbjct: 5 RTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPP 64
Query: 178 AMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKY 237
A+ P +DING W+GSATILP+G+ V+LYTG K+ QVQN+A P + SDP L +W K
Sbjct: 65 AIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKS 124
Query: 238 PGNPVLVPP--RHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYEL 295
P NP++ P I FRDPTTAW G D KWR+ IGSKI + G+++ Y + DF +E
Sbjct: 125 PLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEK 184
Query: 296 LDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPG---IKHVLKASLDDTKVDHYAI 352
E LH G+GMW C DF+PV GS G++TS+ G +KHVLK SLDDTK D+Y I
Sbjct: 185 SPEPLHYDDGSGMWACPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTI 244
Query: 353 GTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDL 412
GTY+ DK+ PDN + G ++DYG+YYASK+F+D K RRI+WGW NE+ + DD+
Sbjct: 245 GTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDV 304
Query: 413 EKGWASVQ 420
EKGW+ +Q
Sbjct: 305 EKGWSGIQ 312
>pdb|2QQU|A Chain A, Crystal Structure Of A Cell-Wall Invertase (D239a) From
Arabidopsis Thaliana In Complex With Sucrose
Length = 535
Score = 342 bits (878), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 170/309 (55%), Positives = 214/309 (69%), Gaps = 5/309 (1%)
Query: 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPI 177
RT FHFQP KNWMNDPNGP+ YKG YHLFYQ+NP AVWGNI W H+ S DLI+W P
Sbjct: 5 RTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPP 64
Query: 178 AMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKY 237
A+ P +DING W+GSATILP+G+ V+LYTG K+ QVQN+A P + SDP L +W K
Sbjct: 65 AIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKS 124
Query: 238 PGNPVLVPP--RHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYEL 295
P NP++ P I FRDPTTAW G D KWR+ IGSKI + G+++ Y + DF +E
Sbjct: 125 PLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEK 184
Query: 296 LDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPG---IKHVLKASLDDTKVDHYAI 352
E LH G+GMWEC DF+PV GS G++TS+ G +KHVLK SL DTK D+Y I
Sbjct: 185 SPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLADTKHDYYTI 244
Query: 353 GTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDL 412
GTY+ DK+ PDN + G ++DYG+YYASK+F+D K RRI+WGW NE+ + DD+
Sbjct: 245 GTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDV 304
Query: 413 EKGWASVQV 421
EKGW+ +Q
Sbjct: 305 EKGWSGIQT 313
>pdb|2QQW|A Chain A, Crystal Structure Of A Cell-Wall Invertase (D23a) From
Arabidopsis Thaliana In Complex With Sucrose
Length = 537
Score = 342 bits (878), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 170/308 (55%), Positives = 214/308 (69%), Gaps = 5/308 (1%)
Query: 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPI 177
RT FHFQP KNWMN PNGP+ YKG YHLFYQ+NP AVWGNI W H+ S DLI+W P
Sbjct: 5 RTGFHFQPPKNWMNAPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPP 64
Query: 178 AMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKY 237
A+ P +DING W+GSATILP+G+ V+LYTG K+ QVQN+A P + SDP L +W K
Sbjct: 65 AIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKS 124
Query: 238 PGNPVLVPP--RHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYEL 295
P NP++ P I FRDPTTAW G D KWR+ IGSKI + G+++ Y + DF +E
Sbjct: 125 PLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEK 184
Query: 296 LDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPG---IKHVLKASLDDTKVDHYAI 352
E LH G+GMWEC DF+PV GS G++TS+ G +KHVLK SLDDTK D+Y I
Sbjct: 185 SPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTI 244
Query: 353 GTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDL 412
GTY+ DK+ PDN + G ++DYG+YYASK+F+D K RRI+WGW NE+ + DD+
Sbjct: 245 GTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDV 304
Query: 413 EKGWASVQ 420
EKGW+ +Q
Sbjct: 305 EKGWSGIQ 312
>pdb|1ST8|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From
Cichorium Intybus
pdb|2ADD|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From
Cichorium Intybus In Complex With Sucrose
pdb|2ADE|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From
Cichorium Intybus In Complex With Fructose
pdb|2AEY|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From
Cichorium Intybus In Complex With 2,5
Dideoxy-2,5-Immino-D-Mannitol
Length = 543
Score = 328 bits (841), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 156/306 (50%), Positives = 210/306 (68%), Gaps = 5/306 (1%)
Query: 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGN-ITWGHAVSADLIHWLYLP 176
RT +HFQP NWMNDPNGP+ Y+G YH FYQYNP +A +G+ I WGHAVS DL++W++L
Sbjct: 8 RTGYHFQPPSNWMNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDLVNWIHLD 67
Query: 177 IAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVK 236
A+ P Q D W+GSATILP MLYTGS KS QVQ+LA+P + SDP L +WVK
Sbjct: 68 PAIYPTQEADSKSCWSGSATILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPFLREWVK 127
Query: 237 YPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELL 296
+P NP++ PP + FRDP+TAW GPDG WR+ +G G++ +YQ+TDF ++
Sbjct: 128 HPKNPLITPPEGVKDDCFRDPSTAWLGPDGVWRIVVGGDRDNNGMAFLYQSTDFVNWKRY 187
Query: 297 DEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYN 356
D+ L + TG WEC DFYPV +N + GLDTS G ++HV+KA + D Y IGTY+
Sbjct: 188 DQPLSSADATGTWECPDFYPVPLNSTNGLDTSVYGGSVRHVMKAGFEGH--DWYTIGTYS 245
Query: 357 PANDKWTPDNPEEDVG--IGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEK 414
P + + P N G + L++DYG++YASKSF+D K RR++W W+ ETD+++DD+EK
Sbjct: 246 PDRENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQADDIEK 305
Query: 415 GWASVQ 420
GWA +Q
Sbjct: 306 GWAGLQ 311
>pdb|2AEZ|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia (E201q)
From Cichorium Intybus In Complex With 1-Kestose
Length = 543
Score = 327 bits (838), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 155/306 (50%), Positives = 210/306 (68%), Gaps = 5/306 (1%)
Query: 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGN-ITWGHAVSADLIHWLYLP 176
RT +HFQP NWMNDPNGP+ Y+G YH FYQYNP +A +G+ I WGHAVS DL++W++L
Sbjct: 8 RTGYHFQPPSNWMNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDLVNWIHLD 67
Query: 177 IAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVK 236
A+ P Q D W+GSATILP MLYTGS KS QVQ+LA+P + SDP L +WVK
Sbjct: 68 PAIYPTQEADSKSCWSGSATILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPFLREWVK 127
Query: 237 YPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELL 296
+P NP++ PP + FRDP+TAW GPDG WR+ +G G++ +YQ+TDF ++
Sbjct: 128 HPKNPLITPPEGVKDDCFRDPSTAWLGPDGVWRIVVGGDRDNNGMAFLYQSTDFVNWKRY 187
Query: 297 DEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYN 356
D+ L + TG W+C DFYPV +N + GLDTS G ++HV+KA + D Y IGTY+
Sbjct: 188 DQPLSSADATGTWQCPDFYPVPLNSTNGLDTSVYGGSVRHVMKAGFEGH--DWYTIGTYS 245
Query: 357 PANDKWTPDNPEEDVG--IGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEK 414
P + + P N G + L++DYG++YASKSF+D K RR++W W+ ETD+++DD+EK
Sbjct: 246 PDRENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQADDIEK 305
Query: 415 GWASVQ 420
GWA +Q
Sbjct: 306 GWAGLQ 311
>pdb|1UYP|A Chain A, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
pdb|1UYP|B Chain B, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
pdb|1UYP|C Chain C, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
pdb|1UYP|D Chain D, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
pdb|1UYP|E Chain E, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
pdb|1UYP|F Chain F, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
Length = 432
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 92/247 (37%), Positives = 127/247 (51%), Gaps = 17/247 (6%)
Query: 120 SFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAM 179
++HF P WMNDPNG +F+KG YH+FYQYNP WGNI WGHAVS DL+HW +LP+A+
Sbjct: 5 NYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPVAL 64
Query: 180 VPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPG 239
PD + +GV++GSA + DG++ ++YT D + LD+VKY G
Sbjct: 65 YPDD--ETHGVFSGSA-VEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKYDG 121
Query: 240 NPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGS-KIGKTGISLVYQTTDFKTYELLDE 298
NPV+ P G FRDP + +G+WR+ +GS K K G L+Y + D ++ +
Sbjct: 122 NPVISKPPEEGTHAFRDPKVNRS--NGEWRMVLGSGKDEKIGRVLLYTSDDLFHWK-YEG 178
Query: 299 YLHAVPGTGMWECVDF----------YPVAINGSVGLDTSATGPGIKHVLKASLDDTKVD 348
+ T EC D Y + SV G +V K L D D
Sbjct: 179 AIFEDETTKEIECPDLVRIGEKDILIYSITSTNSVLFSMGELKEGKLNVEKRGLLDHGTD 238
Query: 349 HYAIGTY 355
YA T+
Sbjct: 239 FYAAQTF 245
>pdb|1W2T|A Chain A, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
pdb|1W2T|B Chain B, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
pdb|1W2T|C Chain C, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
pdb|1W2T|D Chain D, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
pdb|1W2T|E Chain E, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
pdb|1W2T|F Chain F, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
Length = 432
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 127/247 (51%), Gaps = 17/247 (6%)
Query: 120 SFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAM 179
++HF P WMNDPNG +F+KG YH+FYQYNP WGNI WGHAVS DL+HW +LP+A+
Sbjct: 5 NYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPVAL 64
Query: 180 VPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPG 239
PD + +GV++GSA + DG++ ++YT D + LD+VKY G
Sbjct: 65 YPDD--ETHGVFSGSA-VEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKYDG 121
Query: 240 NPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGS-KIGKTGISLVYQTTDFKTYELLDE 298
NPV+ P G FRDP + +G+WR+ +GS K K G L+Y + D ++ +
Sbjct: 122 NPVISKPPEEGTHAFRDPKVNRS--NGEWRMVLGSGKDEKIGRVLLYTSDDLFHWK-YEG 178
Query: 299 YLHAVPGTGMWECVDF----------YPVAINGSVGLDTSATGPGIKHVLKASLDDTKVD 348
+ T +C D Y + SV G +V K L D D
Sbjct: 179 AIFEDETTKEIDCPDLVRIGEKDILIYSITSTNSVLFSMGELKEGKLNVEKRGLLDHGTD 238
Query: 349 HYAIGTY 355
YA T+
Sbjct: 239 FYAAQTF 245
>pdb|1Y9M|A Chain A, Crystal Structure Of Exo-Inulinase From Aspergillus
Awamori In Spacegroup P212121
pdb|1Y9G|A Chain A, Crystal Structure Of Exo-Inulinase From Aspergillus
Awamori Complexed With Fructose
pdb|1Y4W|A Chain A, Crystal Structure Of Exo-Inulinase From Aspergillus
Awamori In Spacegroup P21
Length = 518
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 144/319 (45%), Gaps = 45/319 (14%)
Query: 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPI 177
R +HF P+KNWMNDPNG L++ G YHLF+QYNP WGNI+WGHA+S DL HW P+
Sbjct: 8 RGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWEEKPV 67
Query: 178 AMVPDQW-YDINGVW-TGSAT--------ILPDGQ--IVMLYTG------------STDK 213
A++ + D+ ++ +GSA DG+ +V +YT + +
Sbjct: 68 ALLARGFGSDVTEMYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQE 127
Query: 214 SVQVQNLAYPADPSDPLLLDWVKY-PGNPVL---VPPRHIGPKDFRDPTTAWAGPDGKWR 269
Q Q++AY D L W Y NPV+ P ++FRDP W KW
Sbjct: 128 DQQSQSIAYSLDDG----LTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVFWHDESQKW- 182
Query: 270 LTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAI---NGSVGLD 326
+ + I + +Y + + K ++L+ E+ G+WEC + + N + +
Sbjct: 183 -VVVTSIAELHKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDSGNSTKWVI 241
Query: 327 TSATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKW-DYG-RYYA 384
TS PG S V + T+ P D P N + W D+G +YA
Sbjct: 242 TSGLNPGGPPGTVGSGTQYFVGEFDGTTFTPDADTVYPGNSTAN------WMDWGPDFYA 295
Query: 385 SKSFYDPYKKRRIVWGWIN 403
+ + + GW+N
Sbjct: 296 AAGYNGLSLNDHVHIGWMN 314
>pdb|3PIG|A Chain A, Beta-Fructofuranosidase From Bifidobacterium Longum
pdb|3PIG|B Chain B, Beta-Fructofuranosidase From Bifidobacterium Longum
pdb|3PIJ|A Chain A, Beta-Fructofuranosidase From Bifidobacterium Longum -
Complex With Fructose
pdb|3PIJ|B Chain B, Beta-Fructofuranosidase From Bifidobacterium Longum -
Complex With Fructose
Length = 526
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 133/302 (44%), Gaps = 43/302 (14%)
Query: 121 FHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV 180
+H W+NDPNG FYKG +H+FYQ +P WG + WGH S D+++W PI
Sbjct: 43 YHIASNGGWINDPNGLCFYKGRWHVFYQLHPYGTQWGPMHWGHVSSTDMLNWKREPIMFA 102
Query: 181 PDQWYDINGVWTGSATILPDGQIVMLYTG--------STDKSVQVQNLAYPADPSDPLLL 232
P + +GV++GSA I +G + YTG +T QVQ A P D L
Sbjct: 103 PSLEQEKDGVFSGSAVIDDNGDLRFYYTGHRWANGHDNTGGDWQVQMTALP----DNDEL 158
Query: 233 DWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIG-SKIGKTGISLVYQTTDFK 291
G + P + +RDP W D W +T G S K G ++ + D
Sbjct: 159 TSATKQGMIIDCPTDKV-DHHYRDPKV-WKTGD-TWYMTFGVSSADKRGQMWLFSSKDMV 215
Query: 292 TYELLDE-YLHAVPGTGMWECVDFYPVA--------INGSVGLDTSATGPGIKHVLKASL 342
+E + H P M EC DF P+ + G + + +G ++V A
Sbjct: 216 RWEYERVLFQHPDPDVFMLECPDFSPIKDKDGNEKWVIGFSAMGSKPSGFMNRNVSNAG- 274
Query: 343 DDTKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGR-YYASKSFYDPYKKRRIVWGW 401
Y IGT+ P + PE + + WD G YYA +SF R+IV+GW
Sbjct: 275 -------YMIGTWEPGGEF----KPETEFRL---WDCGHNYYAPQSF--NVDGRQIVYGW 318
Query: 402 IN 403
++
Sbjct: 319 MS 320
>pdb|3KF5|A Chain A, Structure Of Invertase From Schwanniomyces Occidentalis
pdb|3KF5|B Chain B, Structure Of Invertase From Schwanniomyces Occidentalis
Length = 512
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 111/225 (49%), Gaps = 34/225 (15%)
Query: 116 WQRTSFHFQPEKNWMNDPNGPLFY----KGWYHLFYQYNPDSAVWGN-ITWGHAVSADLI 170
+ R HF PEK WMNDPNG LFY K W HL++QYNP++ WG + WGHA S DL+
Sbjct: 11 YNRPLIHFTPEKGWMNDPNG-LFYDKTAKLW-HLYFQYNPNATAWGQPLYWGHATSNDLV 68
Query: 171 HWLYLPIAMVPDQWYDINGVWTGS-------------ATILPDGQIVMLYTGSTDKSVQV 217
HW IA+ P+ +D G+++GS ++I P+ +IV +YT + + Q
Sbjct: 69 HWDEHEIAIGPE--HDNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNIPDN-QT 125
Query: 218 QNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG 277
Q++A+ D + KY NPV+ + FRDP W +W + + SK
Sbjct: 126 QDIAFSLDGG----YTFTKYENNPVI----DVSSNQFRDPKVFWHEDSNQWIMVV-SKSQ 176
Query: 278 KTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGS 322
+ I ++ + + K + L + G +EC V I S
Sbjct: 177 EYKIQ-IFGSANLKNWVLNSNFSSGYYG-NQYECPGLIEVPIENS 219
>pdb|3KF3|A Chain A, Structure Of Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructose
pdb|3KF3|B Chain B, Structure Of Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructose
Length = 509
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 111/225 (49%), Gaps = 34/225 (15%)
Query: 116 WQRTSFHFQPEKNWMNDPNGPLFY----KGWYHLFYQYNPDSAVWGN-ITWGHAVSADLI 170
+ R HF PEK WMNDPNG LFY K W HL++QYNP++ WG + WGHA S DL+
Sbjct: 8 YNRPLIHFTPEKGWMNDPNG-LFYDKTAKLW-HLYFQYNPNATAWGQPLYWGHATSNDLV 65
Query: 171 HWLYLPIAMVPDQWYDINGVWTGS-------------ATILPDGQIVMLYTGSTDKSVQV 217
HW IA+ P+ +D G+++GS ++I P+ +IV +YT + + Q
Sbjct: 66 HWDEHEIAIGPE--HDNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNIPDN-QT 122
Query: 218 QNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG 277
Q++A+ D + KY NPV+ + FRDP W +W + + SK
Sbjct: 123 QDIAFSLDGG----YTFTKYENNPVI----DVSSNQFRDPKVFWHEDSNQWIMVV-SKSQ 173
Query: 278 KTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGS 322
+ I ++ + + K + L + G +EC V I S
Sbjct: 174 EYKIQ-IFGSANLKNWVLNSNFSSGYYG-NQYECPGLIEVPIENS 216
>pdb|3U75|A Chain A, Structure Of E230a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructosylnystose
pdb|3U75|B Chain B, Structure Of E230a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructosylnystose
pdb|3U75|C Chain C, Structure Of E230a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructosylnystose
pdb|3U75|D Chain D, Structure Of E230a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructosylnystose
Length = 535
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 92/176 (52%), Gaps = 31/176 (17%)
Query: 116 WQRTSFHFQPEKNWMNDPNGPLFY----KGWYHLFYQYNPDSAVWGN-ITWGHAVSADLI 170
+ R HF PEK WMNDPNG LFY K W HL++QYNP++ WG + WGHA S DL+
Sbjct: 34 YNRPLIHFTPEKGWMNDPNG-LFYDKTAKLW-HLYFQYNPNATAWGQPLYWGHATSNDLV 91
Query: 171 HWLYLPIAMVPDQWYDINGVWTGS-------------ATILPDGQIVMLYTGSTDKSVQV 217
HW IA+ P+ +D G+++GS ++I P+ +IV +YT + + Q
Sbjct: 92 HWDEHEIAIGPE--HDNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNIPDN-QT 148
Query: 218 QNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIG 273
Q++A+ D + KY NPV+ + FRDP W +W + +
Sbjct: 149 QDIAFSLDGG----YTFTKYENNPVI----DVSSNQFRDPKVFWHEDSNQWIMVVS 196
>pdb|3SC7|X Chain X, First Crystal Structure Of An Endo-Inulinase, From
Aspergillus Ficuum: Structural Analysis And Comparison
With Other Gh32 Enzymes.
pdb|3RWK|X Chain X, First Crystal Structure Of An Endo-Inulinase, From
Aspergillus Ficuum: Structural Analysis And Comparison
With Other Gh32 Enzymes
Length = 516
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 87/174 (50%), Gaps = 27/174 (15%)
Query: 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPI 177
R S+HF P++ WMN+PNG + +HLF+Q+NP + VWGNI WGHA S DL+HW + P
Sbjct: 29 RPSYHFTPDQYWMNEPNGLIKIGSTWHLFFQHNPTANVWGNICWGHATSTDLMHWAHKPT 88
Query: 178 AMVPDQWYDINGV--WTGSATILPDGQ----------IVMLYTG-STDKSVQVQNLAYPA 224
A+ D NGV +TG+A P+ + +TG +T Q Q LA+
Sbjct: 89 AIA-----DENGVEAFTGTAYYDPNNTSGLGDSANPPYLAWFTGYTTSSQTQDQRLAFSV 143
Query: 225 DPSDPLLLDWVKYPGNPVL-----VPPRHIGPKDFRDPTTAWAGPDGKWRLTIG 273
D W K+ GNP++ P G + RDP + G W + +
Sbjct: 144 DNG----ATWTKFQGNPIISTSQEAPHDITGGLESRDPKVFFHRQSGNWIMVLA 193
>pdb|3U14|A Chain A, Structure Of D50a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Inulin
pdb|3U14|B Chain B, Structure Of D50a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Inulin
Length = 535
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 110/225 (48%), Gaps = 34/225 (15%)
Query: 116 WQRTSFHFQPEKNWMNDPNGPLFY----KGWYHLFYQYNPDSAVWGN-ITWGHAVSADLI 170
+ R HF PEK WMN PNG LFY K W HL++QYNP++ WG + WGHA S DL+
Sbjct: 34 YNRPLIHFTPEKGWMNAPNG-LFYDKTAKLW-HLYFQYNPNATAWGQPLYWGHATSNDLV 91
Query: 171 HWLYLPIAMVPDQWYDINGVWTGS-------------ATILPDGQIVMLYTGSTDKSVQV 217
HW IA+ P+ +D G+++GS ++I P+ +IV +YT + + Q
Sbjct: 92 HWDEHEIAIGPE--HDNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNIPDN-QT 148
Query: 218 QNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG 277
Q++A+ D + KY NPV+ + FRDP W +W + + SK
Sbjct: 149 QDIAFSLDGG----YTFTKYENNPVI----DVSSNQFRDPKVFWHEDSNQWIMVV-SKSQ 199
Query: 278 KTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGS 322
+ I ++ + + K + L + G +EC V I S
Sbjct: 200 EYKIQ-IFGSANLKNWVLNSNFSSGYYG-NQYECPGLIEVPIENS 242
>pdb|4FFF|A Chain A, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens
pdb|4FFF|B Chain B, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens
pdb|4FFF|C Chain C, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens
pdb|4FFF|D Chain D, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens
Length = 490
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 93/242 (38%), Gaps = 44/242 (18%)
Query: 121 FHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAM- 179
+H P W+ DP P+ G Y L+Y ++ + G W HA + D + + + M
Sbjct: 4 YHMTPPSGWLCDPQRPVTTHGAYQLYYLHSDQNN--GPGGWDHASTTDGVAFTHHGTVMP 61
Query: 180 -VPDQWYDINGVWTGSATI-------LPDGQIVMLYTGSTD--KSVQVQNLAYPADPS-- 227
PD VW+GSA + G +V L T TD + Q Q L + D
Sbjct: 62 LRPD-----FPVWSGSAVVDTANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTDGGFT 116
Query: 228 -----DPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGIS 282
DP++ V G P + FRDP W G+W IG+ +
Sbjct: 117 FTALPDPVI---VNTDGRAATTPAEIENAEWFRDPKIHWDTARGEWVCV----IGRLRYA 169
Query: 283 LVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKH-VLKAS 341
Y + + + + L + + G EC D + + + G +H VL AS
Sbjct: 170 AFYTSPNLRDWTLRRNFDYPNHALGGIECPDLFEITAD-----------DGTRHWVLAAS 218
Query: 342 LD 343
+D
Sbjct: 219 MD 220
>pdb|4FFG|A Chain A, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens In Complex With Dfa-Iv
pdb|4FFG|B Chain B, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens In Complex With Dfa-Iv
pdb|4FFG|C Chain C, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens In Complex With Dfa-Iv
pdb|4FFG|D Chain D, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens In Complex With Dfa-Iv
Length = 492
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 93/242 (38%), Gaps = 44/242 (18%)
Query: 121 FHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAM- 179
+H P W+ DP P+ G Y L+Y ++ + G W HA + D + + + M
Sbjct: 4 YHMTPPSGWLCDPQRPVTTHGAYQLYYLHSDQNN--GPGGWDHASTTDGVAFTHHGTVMP 61
Query: 180 -VPDQWYDINGVWTGSATI-------LPDGQIVMLYTGSTD--KSVQVQNLAYPADPS-- 227
PD VW+GSA + G +V L T TD + Q Q L + D
Sbjct: 62 LRPD-----FPVWSGSAVVDTANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTDGGFT 116
Query: 228 -----DPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGIS 282
DP++ V G P + FRDP W G+W IG+ +
Sbjct: 117 FTALPDPVI---VNTDGRAATTPAEIENAEWFRDPKIHWDTARGEWVCV----IGRLRYA 169
Query: 283 LVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKH-VLKAS 341
Y + + + + L + + G EC D + + + G +H VL AS
Sbjct: 170 AFYTSPNLRDWTLRRNFDYPNHALGGIECPDLFEITAD-----------DGTRHWVLAAS 218
Query: 342 LD 343
+D
Sbjct: 219 MD 220
>pdb|4FFH|A Chain A, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Sucrose
pdb|4FFH|B Chain B, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Sucrose
pdb|4FFH|C Chain C, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Sucrose
pdb|4FFH|D Chain D, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Sucrose
pdb|4FFI|A Chain A, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Levanbiose
pdb|4FFI|B Chain B, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Levanbiose
pdb|4FFI|C Chain C, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Levanbiose
pdb|4FFI|D Chain D, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Levanbiose
Length = 492
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 93/242 (38%), Gaps = 44/242 (18%)
Query: 121 FHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAM- 179
+H P W+ +P P+ G Y L+Y ++ + G W HA + D + + + M
Sbjct: 4 YHMTPPSGWLCNPQRPVTTHGAYQLYYLHSDQNN--GPGGWDHASTTDGVAFTHHGTVMP 61
Query: 180 -VPDQWYDINGVWTGSATI-------LPDGQIVMLYTGSTD--KSVQVQNLAYPADPS-- 227
PD VW+GSA + G +V L T TD + Q Q L + D
Sbjct: 62 LRPD-----FPVWSGSAVVDTANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTDGGFT 116
Query: 228 -----DPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGIS 282
DP++ V G P + FRDP W G+W IG+ +
Sbjct: 117 FTALPDPVI---VNTDGRAATTPAEIENAEWFRDPKIHWDTARGEWVCV----IGRLRYA 169
Query: 283 LVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKH-VLKAS 341
Y + + + + L + + G EC D + + + G +H VL AS
Sbjct: 170 AFYTSPNLRDWTLRRNFDYPNHALGGIECPDLFEITAD-----------DGTRHWVLAAS 218
Query: 342 LD 343
+D
Sbjct: 219 MD 220
>pdb|1Y23|A Chain A, Crystal Structure Of A Member Of Hit Family Of Proteins
From Bacillus Subtilis
pdb|1Y23|B Chain B, Crystal Structure Of A Member Of Hit Family Of Proteins
From Bacillus Subtilis
pdb|1Y23|C Chain C, Crystal Structure Of A Member Of Hit Family Of Proteins
From Bacillus Subtilis
pdb|1Y23|D Chain D, Crystal Structure Of A Member Of Hit Family Of Proteins
From Bacillus Subtilis
pdb|1Y23|E Chain E, Crystal Structure Of A Member Of Hit Family Of Proteins
From Bacillus Subtilis
Length = 145
Score = 29.6 bits (65), Expect = 3.7, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 276 IGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAIN 320
I KT I VY+ TD EL +Y HAVP +F P+ +N
Sbjct: 45 IPKTHIENVYEFTD----ELAKQYFHAVPKIARAIRDEFEPIGLN 85
>pdb|3FLP|A Chain A, Crystal Structure Of Native Heptameric Sap-Like Pentraxin
From Limulus Polyphemus
pdb|3FLP|B Chain B, Crystal Structure Of Native Heptameric Sap-Like Pentraxin
From Limulus Polyphemus
pdb|3FLP|C Chain C, Crystal Structure Of Native Heptameric Sap-Like Pentraxin
From Limulus Polyphemus
pdb|3FLP|D Chain D, Crystal Structure Of Native Heptameric Sap-Like Pentraxin
From Limulus Polyphemus
pdb|3FLP|E Chain E, Crystal Structure Of Native Heptameric Sap-Like Pentraxin
From Limulus Polyphemus
pdb|3FLP|F Chain F, Crystal Structure Of Native Heptameric Sap-Like Pentraxin
From Limulus Polyphemus
pdb|3FLP|G Chain G, Crystal Structure Of Native Heptameric Sap-Like Pentraxin
From Limulus Polyphemus
pdb|3FLP|H Chain H, Crystal Structure Of Native Heptameric Sap-Like Pentraxin
From Limulus Polyphemus
pdb|3FLP|I Chain I, Crystal Structure Of Native Heptameric Sap-Like Pentraxin
From Limulus Polyphemus
pdb|3FLP|J Chain J, Crystal Structure Of Native Heptameric Sap-Like Pentraxin
From Limulus Polyphemus
pdb|3FLP|K Chain K, Crystal Structure Of Native Heptameric Sap-Like Pentraxin
From Limulus Polyphemus
pdb|3FLP|L Chain L, Crystal Structure Of Native Heptameric Sap-Like Pentraxin
From Limulus Polyphemus
pdb|3FLP|M Chain M, Crystal Structure Of Native Heptameric Sap-Like Pentraxin
From Limulus Polyphemus
pdb|3FLP|N Chain N, Crystal Structure Of Native Heptameric Sap-Like Pentraxin
From Limulus Polyphemus
pdb|3FLR|A Chain A, Crystal Structure Of Native Octameric Sap-Like Pentraxin
From Limulus Polyphemus
pdb|3FLR|B Chain B, Crystal Structure Of Native Octameric Sap-Like Pentraxin
From Limulus Polyphemus
pdb|3FLT|A Chain A, Crystal Structure Of Pe-Bound Octameric Sap-Like Pentraxin
From Limulus Polyphemus
pdb|3FLT|B Chain B, Crystal Structure Of Pe-Bound Octameric Sap-Like Pentraxin
From Limulus Polyphemus
Length = 217
Score = 28.5 bits (62), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Query: 157 GNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGS 210
G + G V+A ++ PI + QWY + VW+G DG++ + GS
Sbjct: 72 GTLNLGLQVNASSNKYISCPIEIELGQWYHVCHVWSG-----VDGRMAVYANGS 120
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.136 0.450
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,695,674
Number of Sequences: 62578
Number of extensions: 731084
Number of successful extensions: 1533
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1468
Number of HSP's gapped (non-prelim): 33
length of query: 461
length of database: 14,973,337
effective HSP length: 102
effective length of query: 359
effective length of database: 8,590,381
effective search space: 3083946779
effective search space used: 3083946779
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (25.0 bits)