Query 012547
Match_columns 461
No_of_seqs 274 out of 2466
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 11:34:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012547.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012547hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fgw_A Glycerol-3-phosphate de 100.0 3.9E-65 1.3E-69 525.9 30.2 334 40-433 31-385 (391)
2 3k96_A Glycerol-3-phosphate de 100.0 4.4E-60 1.5E-64 484.8 36.5 322 42-438 28-356 (356)
3 1yj8_A Glycerol-3-phosphate de 100.0 7.5E-44 2.6E-48 365.7 30.8 340 33-436 11-371 (375)
4 1x0v_A GPD-C, GPDH-C, glycerol 100.0 1.3E-40 4.4E-45 337.6 34.4 329 43-435 8-352 (354)
5 1z82_A Glycerol-3-phosphate de 100.0 1.1E-40 3.7E-45 337.1 33.1 316 42-441 13-334 (335)
6 1evy_A Glycerol-3-phosphate de 100.0 2.3E-38 7.9E-43 323.2 34.2 321 45-438 17-350 (366)
7 1txg_A Glycerol-3-phosphate de 100.0 4.1E-34 1.4E-38 286.8 32.2 314 44-432 1-333 (335)
8 3hwr_A 2-dehydropantoate 2-red 100.0 2.6E-30 8.9E-35 259.8 22.2 281 41-419 17-310 (318)
9 3i83_A 2-dehydropantoate 2-red 100.0 7.8E-30 2.7E-34 256.3 20.5 278 43-419 2-300 (320)
10 3hn2_A 2-dehydropantoate 2-red 100.0 7.7E-30 2.6E-34 255.4 20.0 282 43-420 2-302 (312)
11 3ghy_A Ketopantoate reductase 100.0 1.8E-28 6.1E-33 247.9 18.6 289 43-419 3-319 (335)
12 3g17_A Similar to 2-dehydropan 100.0 1.7E-27 5.7E-32 236.6 20.9 271 43-419 2-282 (294)
13 2ew2_A 2-dehydropantoate 2-red 99.9 2.5E-26 8.4E-31 227.3 22.9 282 43-419 3-308 (316)
14 3ego_A Probable 2-dehydropanto 99.9 2.3E-24 7.7E-29 215.6 18.0 278 43-421 2-293 (307)
15 2qyt_A 2-dehydropantoate 2-red 99.9 2.7E-24 9.1E-29 213.6 18.3 286 42-419 7-313 (317)
16 1ks9_A KPA reductase;, 2-dehyd 99.9 3.2E-23 1.1E-27 202.8 21.4 276 44-419 1-287 (291)
17 3c7a_A Octopine dehydrogenase; 99.9 1.9E-23 6.6E-28 215.7 18.0 296 43-418 2-359 (404)
18 2y0c_A BCEC, UDP-glucose dehyd 99.9 2.5E-23 8.7E-28 220.3 19.3 289 42-431 7-322 (478)
19 4a7p_A UDP-glucose dehydrogena 99.9 4.5E-22 1.5E-26 208.9 21.1 222 44-331 9-249 (446)
20 3gg2_A Sugar dehydrogenase, UD 99.9 1.8E-21 6.2E-26 204.6 19.7 224 44-331 3-245 (450)
21 1mv8_A GMD, GDP-mannose 6-dehy 99.8 4E-20 1.4E-24 193.4 19.5 292 44-433 1-311 (436)
22 3pdu_A 3-hydroxyisobutyrate de 99.8 5E-19 1.7E-23 174.5 18.4 260 43-419 1-267 (287)
23 1vpd_A Tartronate semialdehyde 99.8 1.1E-18 3.7E-23 172.2 19.9 257 44-418 6-270 (299)
24 3pef_A 6-phosphogluconate dehy 99.8 2.9E-18 1E-22 169.0 20.0 261 44-419 2-267 (287)
25 1bg6_A N-(1-D-carboxylethyl)-L 99.8 3.3E-18 1.1E-22 172.4 20.1 287 43-419 4-328 (359)
26 2uyy_A N-PAC protein; long-cha 99.8 3.4E-18 1.2E-22 170.5 19.2 259 43-419 30-296 (316)
27 3g0o_A 3-hydroxyisobutyrate de 99.8 5.4E-18 1.9E-22 168.6 20.3 263 42-418 6-274 (303)
28 3doj_A AT3G25530, dehydrogenas 99.8 6.8E-18 2.3E-22 168.6 20.5 266 39-419 17-287 (310)
29 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.8 3.3E-18 1.1E-22 181.1 19.1 282 44-435 2-309 (478)
30 2zyd_A 6-phosphogluconate dehy 99.8 1.5E-18 5.2E-23 183.8 15.6 281 43-434 15-318 (480)
31 4dll_A 2-hydroxy-3-oxopropiona 99.8 4.4E-18 1.5E-22 170.9 18.0 275 23-418 10-294 (320)
32 2gf2_A Hibadh, 3-hydroxyisobut 99.8 8.4E-18 2.9E-22 165.6 19.0 252 44-418 1-272 (296)
33 2h78_A Hibadh, 3-hydroxyisobut 99.8 1E-17 3.5E-22 166.0 17.9 263 42-419 2-276 (302)
34 3qha_A Putative oxidoreductase 99.8 8.7E-18 3E-22 166.8 17.1 263 43-419 15-285 (296)
35 3cky_A 2-hydroxymethyl glutara 99.8 1.2E-17 4E-22 165.0 17.8 252 42-418 3-270 (301)
36 3g79_A NDP-N-acetyl-D-galactos 99.8 2.7E-17 9.2E-22 173.9 21.2 226 42-331 17-268 (478)
37 1yb4_A Tartronic semialdehyde 99.8 1.9E-17 6.5E-22 162.8 18.0 259 42-418 2-267 (295)
38 4ezb_A Uncharacterized conserv 99.8 3.8E-17 1.3E-21 164.1 20.5 252 43-416 24-283 (317)
39 2pgd_A 6-phosphogluconate dehy 99.7 1.7E-17 5.8E-22 175.8 17.5 273 44-419 3-290 (482)
40 2f1k_A Prephenate dehydrogenas 99.7 4.4E-18 1.5E-22 166.4 11.7 210 44-329 1-226 (279)
41 3tri_A Pyrroline-5-carboxylate 99.7 1.3E-16 4.3E-21 157.5 21.2 157 43-274 3-162 (280)
42 2izz_A Pyrroline-5-carboxylate 99.7 1.7E-16 5.7E-21 159.5 21.9 163 43-278 22-189 (322)
43 2cvz_A Dehydrogenase, 3-hydrox 99.7 7.4E-17 2.5E-21 158.0 18.3 256 43-418 1-261 (289)
44 3gt0_A Pyrroline-5-carboxylate 99.7 6.7E-17 2.3E-21 156.0 17.6 161 43-277 2-164 (247)
45 3qsg_A NAD-binding phosphogluc 99.7 4.6E-16 1.6E-20 155.7 23.1 251 42-419 23-284 (312)
46 2o3j_A UDP-glucose 6-dehydroge 99.7 1.2E-16 4.1E-21 169.2 18.3 227 42-331 8-260 (481)
47 2iz1_A 6-phosphogluconate dehy 99.7 1.7E-16 5.7E-21 167.8 18.6 278 43-434 5-310 (474)
48 3ojo_A CAP5O; rossmann fold, c 99.7 1.9E-16 6.5E-21 165.4 17.6 219 44-330 12-247 (431)
49 2p4q_A 6-phosphogluconate dehy 99.7 4.4E-16 1.5E-20 165.6 18.4 286 43-434 10-313 (497)
50 2rcy_A Pyrroline carboxylate r 99.7 2.2E-15 7.6E-20 145.7 21.8 153 43-277 4-158 (262)
51 1yqg_A Pyrroline-5-carboxylate 99.7 1.2E-15 4.2E-20 147.6 19.8 250 44-419 1-254 (263)
52 1i36_A Conserved hypothetical 99.7 4.1E-15 1.4E-19 144.1 22.9 239 44-419 1-248 (264)
53 1dlj_A UDP-glucose dehydrogena 99.7 6.8E-16 2.3E-20 159.9 17.2 211 44-331 1-237 (402)
54 3pid_A UDP-glucose 6-dehydroge 99.7 1.4E-15 4.7E-20 158.8 19.3 212 42-330 35-265 (432)
55 4gbj_A 6-phosphogluconate dehy 99.7 1.2E-15 3.9E-20 152.1 17.7 257 44-418 6-270 (297)
56 3obb_A Probable 3-hydroxyisobu 99.7 1.6E-15 5.5E-20 151.3 17.5 201 42-331 2-206 (300)
57 2raf_A Putative dinucleotide-b 99.7 2.1E-15 7.1E-20 142.5 16.6 169 42-298 18-195 (209)
58 2q3e_A UDP-glucose 6-dehydroge 99.7 1.8E-15 6E-20 159.6 17.6 226 42-331 4-254 (467)
59 3vtf_A UDP-glucose 6-dehydroge 99.6 9.9E-15 3.4E-19 152.6 22.4 241 13-329 3-259 (444)
60 4gwg_A 6-phosphogluconate dehy 99.6 4.1E-15 1.4E-19 157.4 18.0 276 42-418 3-291 (484)
61 4huj_A Uncharacterized protein 99.6 3.4E-15 1.2E-19 141.9 15.3 178 32-280 15-202 (220)
62 4e21_A 6-phosphogluconate dehy 99.6 3.2E-14 1.1E-18 145.3 20.1 190 43-322 22-234 (358)
63 3dtt_A NADP oxidoreductase; st 99.6 9.2E-15 3.1E-19 141.1 14.9 193 42-289 18-226 (245)
64 3l6d_A Putative oxidoreductase 99.6 1E-13 3.5E-18 138.1 20.7 255 42-418 8-274 (306)
65 2g5c_A Prephenate dehydrogenas 99.6 3.5E-14 1.2E-18 138.9 16.9 175 43-289 1-189 (281)
66 2dpo_A L-gulonate 3-dehydrogen 99.5 2E-13 6.9E-18 137.3 17.7 212 42-330 5-221 (319)
67 3d1l_A Putative NADP oxidoredu 99.5 1.9E-13 6.4E-18 132.7 16.7 157 43-277 10-169 (266)
68 2ahr_A Putative pyrroline carb 99.5 4.2E-13 1.5E-17 129.7 18.7 152 42-275 2-155 (259)
69 3c24_A Putative oxidoreductase 99.5 3.4E-13 1.2E-17 132.6 13.0 153 43-275 11-183 (286)
70 1f0y_A HCDH, L-3-hydroxyacyl-C 99.5 9.8E-13 3.3E-17 130.4 15.9 212 42-329 14-232 (302)
71 1jay_A Coenzyme F420H2:NADP+ o 99.4 3.3E-12 1.1E-16 119.5 17.0 186 44-290 1-195 (212)
72 4e12_A Diketoreductase; oxidor 99.4 4.2E-12 1.5E-16 124.9 18.1 210 43-329 4-218 (283)
73 2vns_A Metalloreductase steap3 99.4 1E-12 3.4E-17 124.4 12.6 166 42-278 27-196 (215)
74 3ggo_A Prephenate dehydrogenas 99.4 4.3E-12 1.5E-16 127.2 17.7 161 43-275 33-204 (314)
75 3b1f_A Putative prephenate deh 99.4 4.4E-12 1.5E-16 124.5 15.7 164 43-276 6-181 (290)
76 3k6j_A Protein F01G10.3, confi 99.4 1.1E-11 3.8E-16 130.3 19.2 177 43-279 54-234 (460)
77 2yjz_A Metalloreductase steap4 99.0 1E-13 3.6E-18 130.4 0.0 160 43-277 19-183 (201)
78 2pv7_A T-protein [includes: ch 99.3 1.5E-11 5.3E-16 121.9 15.6 152 43-283 21-173 (298)
79 3ado_A Lambda-crystallin; L-gu 99.3 7.3E-11 2.5E-15 118.6 17.5 183 40-279 3-192 (319)
80 3mog_A Probable 3-hydroxybutyr 99.3 5.9E-11 2E-15 125.7 16.6 180 43-279 5-188 (483)
81 1zej_A HBD-9, 3-hydroxyacyl-CO 99.2 1.5E-10 5.3E-15 115.0 17.0 183 43-329 12-200 (293)
82 2wtb_A MFP2, fatty acid multif 99.2 1.3E-10 4.5E-15 128.7 16.9 178 43-279 312-495 (725)
83 1np3_A Ketol-acid reductoisome 99.2 7.9E-11 2.7E-15 119.0 13.5 173 44-294 17-210 (338)
84 2i76_A Hypothetical protein; N 99.2 8.9E-12 3E-16 122.1 5.4 150 43-274 2-152 (276)
85 1wdk_A Fatty oxidation complex 99.2 3.2E-10 1.1E-14 125.4 17.9 181 42-279 313-497 (715)
86 1zcj_A Peroxisomal bifunctiona 99.2 7E-10 2.4E-14 116.8 19.6 176 43-279 37-218 (463)
87 3ktd_A Prephenate dehydrogenas 99.1 2.8E-10 9.7E-15 115.4 11.8 156 43-275 8-186 (341)
88 3fr7_A Putative ketol-acid red 99.1 1.9E-09 6.6E-14 113.1 17.9 154 44-270 55-230 (525)
89 1pzg_A LDH, lactate dehydrogen 99.0 5.8E-09 2E-13 105.2 14.0 106 43-201 9-136 (331)
90 1lld_A L-lactate dehydrogenase 99.0 2.5E-09 8.4E-14 106.3 11.0 107 42-203 6-130 (319)
91 2ewd_A Lactate dehydrogenase,; 98.9 6.2E-09 2.1E-13 104.0 13.2 123 42-228 3-142 (317)
92 1hyh_A L-hicdh, L-2-hydroxyiso 98.9 1.2E-08 4E-13 101.6 13.1 105 44-202 2-127 (309)
93 2hjr_A Malate dehydrogenase; m 98.9 1.5E-08 5.1E-13 102.1 12.7 105 43-201 14-135 (328)
94 3zwc_A Peroxisomal bifunctiona 98.8 8.8E-08 3E-12 106.1 17.2 177 44-279 317-497 (742)
95 1a5z_A L-lactate dehydrogenase 98.8 3.4E-08 1.1E-12 98.9 12.4 103 44-202 1-121 (319)
96 1guz_A Malate dehydrogenase; o 98.7 7.2E-08 2.5E-12 96.1 12.6 107 44-202 1-123 (310)
97 3dfu_A Uncharacterized protein 98.7 4.8E-08 1.6E-12 93.8 9.8 129 42-276 5-133 (232)
98 1oju_A MDH, malate dehydrogena 98.7 1E-07 3.6E-12 94.6 11.9 123 44-228 1-139 (294)
99 1t2d_A LDH-P, L-lactate dehydr 98.7 1.7E-07 5.7E-12 94.2 13.5 106 42-201 3-130 (322)
100 2v6b_A L-LDH, L-lactate dehydr 98.6 1.4E-07 4.8E-12 93.8 9.8 103 44-202 1-121 (304)
101 1u8x_X Maltose-6'-phosphate gl 98.5 2.4E-07 8.1E-12 97.8 9.7 111 43-202 28-176 (472)
102 3ba1_A HPPR, hydroxyphenylpyru 98.5 2.5E-07 8.5E-12 93.4 8.8 93 42-203 163-257 (333)
103 1obb_A Maltase, alpha-glucosid 98.5 6.2E-07 2.1E-11 94.6 11.8 83 43-170 3-87 (480)
104 3gvi_A Malate dehydrogenase; N 98.4 1.7E-06 5.8E-11 87.0 13.5 122 43-228 7-145 (324)
105 1ur5_A Malate dehydrogenase; o 98.4 1.5E-06 5.2E-11 86.6 13.0 105 43-201 2-123 (309)
106 2i6t_A Ubiquitin-conjugating e 98.4 2.1E-06 7.2E-11 85.5 12.8 119 42-228 13-146 (303)
107 1ldn_A L-lactate dehydrogenase 98.4 2.5E-06 8.6E-11 85.2 13.0 109 40-201 3-127 (316)
108 2dbq_A Glyoxylate reductase; D 98.4 5E-07 1.7E-11 91.1 7.9 97 41-203 148-246 (334)
109 4dgs_A Dehydrogenase; structur 98.4 9E-07 3.1E-11 89.6 9.6 92 42-202 170-263 (340)
110 2g1u_A Hypothetical protein TM 98.4 4.1E-06 1.4E-10 74.3 12.7 104 43-202 19-123 (155)
111 1s6y_A 6-phospho-beta-glucosid 98.4 1.5E-06 5.1E-11 91.2 11.3 111 43-202 7-157 (450)
112 2gcg_A Glyoxylate reductase/hy 98.4 4E-07 1.4E-11 91.6 6.8 95 42-201 154-250 (330)
113 3fef_A Putative glucosidase LP 98.4 1.4E-06 4.8E-11 91.3 10.8 107 43-202 5-151 (450)
114 1y6j_A L-lactate dehydrogenase 98.3 2E-06 6.9E-11 86.1 11.5 41 42-86 6-46 (318)
115 1lss_A TRK system potassium up 98.3 1.5E-06 5.1E-11 74.5 8.8 39 43-87 4-42 (140)
116 3gvx_A Glycerate dehydrogenase 98.3 6.8E-07 2.3E-11 88.6 6.6 93 42-203 121-215 (290)
117 3pqe_A L-LDH, L-lactate dehydr 98.3 3.9E-06 1.3E-10 84.4 12.1 41 42-86 4-44 (326)
118 2hk9_A Shikimate dehydrogenase 98.3 8.3E-07 2.8E-11 86.8 6.3 120 14-198 102-222 (275)
119 3p7m_A Malate dehydrogenase; p 98.3 8.7E-06 3E-10 81.7 13.8 122 43-228 5-143 (321)
120 2d0i_A Dehydrogenase; structur 98.2 9.8E-07 3.4E-11 88.9 6.4 97 40-203 143-241 (333)
121 3tl2_A Malate dehydrogenase; c 98.2 9.3E-06 3.2E-10 81.2 13.2 105 43-201 8-131 (315)
122 2d4a_B Malate dehydrogenase; a 98.2 8.1E-06 2.8E-10 81.3 12.7 103 45-201 1-120 (308)
123 1ez4_A Lactate dehydrogenase; 98.2 1E-05 3.5E-10 81.0 13.0 41 42-86 4-44 (318)
124 2zqz_A L-LDH, L-lactate dehydr 98.2 8.6E-06 2.9E-10 81.8 12.5 110 39-202 5-130 (326)
125 2w2k_A D-mandelate dehydrogena 98.2 1.5E-06 5.3E-11 88.0 7.1 95 41-199 161-258 (348)
126 3d0o_A L-LDH 1, L-lactate dehy 98.2 7.3E-06 2.5E-10 81.9 11.4 41 42-86 5-45 (317)
127 3nep_X Malate dehydrogenase; h 98.2 1E-05 3.5E-10 80.9 11.9 39 44-86 1-39 (314)
128 3ldh_A Lactate dehydrogenase; 98.2 9E-06 3.1E-10 81.9 11.5 108 42-202 20-143 (330)
129 3vku_A L-LDH, L-lactate dehydr 98.2 1.2E-05 4E-10 81.0 12.3 125 39-227 5-145 (326)
130 3l4b_C TRKA K+ channel protien 98.1 5.7E-06 2E-10 77.5 9.1 103 44-202 1-104 (218)
131 3pp8_A Glyoxylate/hydroxypyruv 98.1 2E-06 6.7E-11 86.2 5.8 95 43-203 139-235 (315)
132 2i99_A MU-crystallin homolog; 98.1 3E-06 1E-10 84.5 6.9 93 41-196 133-225 (312)
133 3fwz_A Inner membrane protein 98.1 1.3E-05 4.5E-10 69.9 9.5 43 39-87 3-45 (140)
134 3llv_A Exopolyphosphatase-rela 98.1 9.2E-06 3.1E-10 70.5 8.2 39 43-87 6-44 (141)
135 3jtm_A Formate dehydrogenase, 98.1 5.5E-06 1.9E-10 84.2 7.7 99 41-203 162-262 (351)
136 3ic5_A Putative saccharopine d 98.1 1.1E-05 3.6E-10 67.0 8.0 40 42-86 4-43 (118)
137 3oj0_A Glutr, glutamyl-tRNA re 98.1 3.2E-06 1.1E-10 74.1 5.0 91 43-198 21-111 (144)
138 3q2i_A Dehydrogenase; rossmann 98.0 1.8E-05 6E-10 79.7 11.0 99 38-202 8-110 (354)
139 3abi_A Putative uncharacterize 98.0 8.1E-06 2.8E-10 82.8 8.1 87 39-181 12-98 (365)
140 1ygy_A PGDH, D-3-phosphoglycer 98.0 3.6E-06 1.2E-10 90.0 5.6 97 41-203 140-238 (529)
141 4aj2_A L-lactate dehydrogenase 98.0 1.8E-05 6.1E-10 79.7 10.1 125 40-227 16-156 (331)
142 2xxj_A L-LDH, L-lactate dehydr 98.0 2.6E-05 9E-10 77.7 11.0 39 44-86 1-39 (310)
143 3evt_A Phosphoglycerate dehydr 98.0 5.9E-06 2E-10 83.0 5.9 95 43-203 137-233 (324)
144 1gdh_A D-glycerate dehydrogena 98.0 6.9E-06 2.4E-10 82.3 6.3 93 42-199 145-240 (320)
145 1mx3_A CTBP1, C-terminal bindi 98.0 9E-06 3.1E-10 82.4 7.1 98 40-202 165-264 (347)
146 2ekl_A D-3-phosphoglycerate de 97.9 8E-06 2.7E-10 81.5 6.2 92 42-199 141-234 (313)
147 1y81_A Conserved hypothetical 97.9 2.7E-05 9.1E-10 68.6 8.9 75 42-182 13-91 (138)
148 2x0j_A Malate dehydrogenase; o 97.9 5.6E-05 1.9E-09 74.9 12.2 122 44-227 1-138 (294)
149 2nac_A NAD-dependent formate d 97.9 1E-05 3.5E-10 83.4 7.0 98 41-202 189-288 (393)
150 4g2n_A D-isomer specific 2-hyd 97.9 1.3E-05 4.4E-10 81.2 7.6 95 43-203 173-269 (345)
151 2dc1_A L-aspartate dehydrogena 97.9 4.3E-05 1.5E-09 72.6 10.6 81 44-199 1-83 (236)
152 2duw_A Putative COA-binding pr 97.9 1.2E-05 4.2E-10 71.3 6.3 84 31-182 5-92 (145)
153 3euw_A MYO-inositol dehydrogen 97.9 4E-05 1.4E-09 76.7 10.8 95 42-202 3-100 (344)
154 2j6i_A Formate dehydrogenase; 97.9 1E-05 3.6E-10 82.4 6.6 98 40-201 161-261 (364)
155 3fi9_A Malate dehydrogenase; s 97.9 8.2E-05 2.8E-09 75.3 13.1 122 43-228 8-147 (343)
156 2hmt_A YUAA protein; RCK, KTN, 97.9 2E-05 6.7E-10 67.6 7.1 38 43-86 6-43 (144)
157 1qp8_A Formate dehydrogenase; 97.9 8.3E-06 2.8E-10 81.1 5.4 90 41-200 122-213 (303)
158 1wwk_A Phosphoglycerate dehydr 97.9 1.6E-05 5.6E-10 79.1 7.3 92 42-199 141-234 (307)
159 3gg9_A D-3-phosphoglycerate de 97.9 1.1E-05 3.7E-10 82.0 6.1 96 43-203 160-257 (352)
160 2vt3_A REX, redox-sensing tran 97.9 4.2E-05 1.4E-09 72.5 9.3 97 25-182 69-167 (215)
161 3uuw_A Putative oxidoreductase 97.9 4.1E-05 1.4E-09 75.4 9.6 95 43-203 6-102 (308)
162 4hkt_A Inositol 2-dehydrogenas 97.9 7.5E-05 2.6E-09 74.3 11.4 93 43-202 3-98 (331)
163 2ho3_A Oxidoreductase, GFO/IDH 97.9 9.7E-05 3.3E-09 73.3 12.1 95 43-202 1-97 (325)
164 3hg7_A D-isomer specific 2-hyd 97.8 7.8E-06 2.7E-10 82.1 3.9 95 43-203 140-236 (324)
165 2d5c_A AROE, shikimate 5-dehyd 97.8 2.6E-05 8.8E-10 75.4 7.2 63 15-86 91-153 (263)
166 1sc6_A PGDH, D-3-phosphoglycer 97.8 2.3E-05 7.7E-10 81.1 7.2 96 40-203 142-239 (404)
167 3k5p_A D-3-phosphoglycerate de 97.8 2.3E-05 7.8E-10 81.2 6.9 93 43-203 156-250 (416)
168 3ezy_A Dehydrogenase; structur 97.8 7.7E-05 2.6E-09 74.6 10.6 96 43-203 2-100 (344)
169 3mz0_A Inositol 2-dehydrogenas 97.8 0.0001 3.6E-09 73.7 11.4 97 43-203 2-102 (344)
170 3c85_A Putative glutathione-re 97.8 6.8E-05 2.3E-09 67.9 9.1 40 43-87 39-78 (183)
171 3qy9_A DHPR, dihydrodipicolina 97.8 4E-05 1.4E-09 73.9 7.8 126 43-266 3-129 (243)
172 3e9m_A Oxidoreductase, GFO/IDH 97.8 4.9E-05 1.7E-09 75.8 8.7 96 42-203 4-103 (330)
173 1j4a_A D-LDH, D-lactate dehydr 97.8 2.5E-05 8.4E-10 78.7 6.4 92 43-201 146-239 (333)
174 3ec7_A Putative dehydrogenase; 97.8 0.00013 4.5E-09 73.6 11.7 97 43-203 23-123 (357)
175 2cuk_A Glycerate dehydrogenase 97.8 1.7E-05 6E-10 79.0 5.1 88 42-200 143-232 (311)
176 4e5n_A Thermostable phosphite 97.8 1.9E-05 6.5E-10 79.5 5.1 96 43-203 145-242 (330)
177 2g76_A 3-PGDH, D-3-phosphoglyc 97.7 3.6E-05 1.2E-09 77.6 7.1 94 41-200 163-258 (335)
178 3cea_A MYO-inositol 2-dehydrog 97.7 0.00014 4.9E-09 72.4 11.4 81 42-181 7-92 (346)
179 3db2_A Putative NADPH-dependen 97.7 9.1E-05 3.1E-09 74.4 10.0 96 42-203 4-102 (354)
180 2yq5_A D-isomer specific 2-hyd 97.7 3.8E-05 1.3E-09 77.7 7.1 92 44-203 149-242 (343)
181 1tlt_A Putative oxidoreductase 97.7 0.00013 4.6E-09 72.0 10.3 95 42-202 4-100 (319)
182 3c1a_A Putative oxidoreductase 97.7 8E-05 2.7E-09 73.6 8.7 94 41-202 8-104 (315)
183 3evn_A Oxidoreductase, GFO/IDH 97.7 0.00013 4.5E-09 72.5 10.3 96 42-203 4-103 (329)
184 2pi1_A D-lactate dehydrogenase 97.7 3.9E-05 1.3E-09 77.3 6.5 94 43-203 141-236 (334)
185 3rc1_A Sugar 3-ketoreductase; 97.7 0.00021 7.1E-09 71.9 11.6 95 43-203 27-125 (350)
186 1x7d_A Ornithine cyclodeaminas 97.7 2.2E-05 7.5E-10 79.6 4.3 79 42-172 128-206 (350)
187 1xdw_A NAD+-dependent (R)-2-hy 97.7 3.5E-05 1.2E-09 77.5 5.6 92 43-202 146-239 (331)
188 1dxy_A D-2-hydroxyisocaproate 97.7 4.9E-05 1.7E-09 76.5 6.5 89 43-199 145-235 (333)
189 3d4o_A Dipicolinate synthase s 97.7 0.00012 4E-09 72.1 9.1 38 42-85 154-191 (293)
190 2d59_A Hypothetical protein PH 97.7 0.00019 6.6E-09 63.4 9.6 96 30-201 13-112 (144)
191 4hy3_A Phosphoglycerate oxidor 97.6 7.4E-05 2.5E-09 76.2 7.6 95 43-203 176-272 (365)
192 1mld_A Malate dehydrogenase; o 97.6 0.00019 6.5E-09 71.5 10.4 101 44-201 1-121 (314)
193 3ijp_A DHPR, dihydrodipicolina 97.6 0.00021 7.1E-09 70.6 10.5 164 19-273 6-171 (288)
194 3u95_A Glycoside hydrolase, fa 97.6 0.00029 1E-08 74.2 12.3 136 44-239 1-189 (477)
195 4gqa_A NAD binding oxidoreduct 97.6 0.00016 5.3E-09 74.2 10.0 118 19-203 6-132 (412)
196 2rir_A Dipicolinate synthase, 97.6 9.1E-05 3.1E-09 73.0 7.7 95 40-199 154-248 (300)
197 1smk_A Malate dehydrogenase, g 97.6 0.00017 5.9E-09 72.2 9.7 38 42-83 7-45 (326)
198 3oet_A Erythronate-4-phosphate 97.6 5.5E-05 1.9E-09 77.5 5.9 93 42-203 118-216 (381)
199 1iuk_A Hypothetical protein TT 97.6 9.2E-05 3.2E-09 65.2 6.6 99 30-202 4-106 (140)
200 1id1_A Putative potassium chan 97.6 0.00024 8.1E-09 62.6 9.3 105 44-202 4-110 (153)
201 2glx_A 1,5-anhydro-D-fructose 97.6 0.00024 8.2E-09 70.4 10.3 93 44-202 1-97 (332)
202 2o4c_A Erythronate-4-phosphate 97.6 3.9E-05 1.3E-09 78.7 4.4 92 41-201 114-211 (380)
203 3ohs_X Trans-1,2-dihydrobenzen 97.6 0.00023 7.8E-09 70.9 9.7 97 43-203 2-102 (334)
204 1ydw_A AX110P-like protein; st 97.6 0.00032 1.1E-08 70.6 10.9 100 41-202 4-106 (362)
205 4f3y_A DHPR, dihydrodipicolina 97.5 0.00028 9.7E-09 69.1 9.9 148 43-273 7-156 (272)
206 1xea_A Oxidoreductase, GFO/IDH 97.5 0.00013 4.4E-09 72.4 7.5 40 43-87 2-42 (323)
207 2z2v_A Hypothetical protein PH 97.5 9.2E-05 3.1E-09 75.4 6.5 41 40-87 13-53 (365)
208 1b8p_A Protein (malate dehydro 97.5 0.00032 1.1E-08 70.2 10.3 110 42-200 4-136 (329)
209 3u62_A Shikimate dehydrogenase 97.5 0.00016 5.5E-09 70.0 7.5 91 45-199 110-202 (253)
210 4h7p_A Malate dehydrogenase; s 97.5 0.00062 2.1E-08 68.8 11.8 130 19-201 6-154 (345)
211 2egg_A AROE, shikimate 5-dehyd 97.5 0.00031 1.1E-08 69.4 9.2 67 14-87 113-180 (297)
212 3e18_A Oxidoreductase; dehydro 97.4 0.00048 1.6E-08 69.5 10.4 94 43-203 5-101 (359)
213 4had_A Probable oxidoreductase 97.4 0.0007 2.4E-08 67.6 11.3 97 42-203 22-122 (350)
214 3m2t_A Probable dehydrogenase; 97.4 0.00053 1.8E-08 69.2 10.2 96 43-203 5-104 (359)
215 3moi_A Probable dehydrogenase; 97.4 0.00053 1.8E-08 69.8 9.7 94 43-202 2-99 (387)
216 3e82_A Putative oxidoreductase 97.3 0.00091 3.1E-08 67.6 11.0 94 42-203 6-103 (364)
217 2dt5_A AT-rich DNA-binding pro 97.3 0.00043 1.5E-08 65.3 7.9 97 25-182 64-162 (211)
218 1o6z_A MDH, malate dehydrogena 97.3 0.00095 3.2E-08 66.0 10.7 38 44-85 1-41 (303)
219 2nu8_A Succinyl-COA ligase [AD 97.3 0.0012 4.1E-08 65.0 11.2 95 41-203 5-102 (288)
220 3hdj_A Probable ornithine cycl 97.3 0.00032 1.1E-08 70.0 6.9 93 42-196 120-212 (313)
221 1zh8_A Oxidoreductase; TM0312, 97.3 0.0012 4.1E-08 66.0 11.2 101 39-203 14-118 (340)
222 1h6d_A Precursor form of gluco 97.3 0.00057 1.9E-08 70.9 9.1 100 42-202 82-185 (433)
223 3f4l_A Putative oxidoreductase 97.3 0.00068 2.3E-08 67.8 9.4 95 43-203 2-101 (345)
224 3keo_A Redox-sensing transcrip 97.3 0.0006 2.1E-08 64.3 8.2 99 24-183 67-171 (212)
225 2p2s_A Putative oxidoreductase 97.3 0.0011 3.7E-08 65.9 10.5 94 43-202 4-101 (336)
226 1omo_A Alanine dehydrogenase; 97.3 0.00055 1.9E-08 68.4 8.2 42 42-87 124-165 (322)
227 3ulk_A Ketol-acid reductoisome 97.2 0.0016 5.3E-08 67.7 11.2 119 24-202 9-136 (491)
228 3hhp_A Malate dehydrogenase; M 97.2 0.0033 1.1E-07 62.7 13.3 36 44-82 1-37 (312)
229 3bio_A Oxidoreductase, GFO/IDH 97.2 0.001 3.5E-08 65.7 9.5 38 42-84 8-46 (304)
230 3kux_A Putative oxidoreductase 97.2 0.0016 5.4E-08 65.3 11.0 94 42-203 6-103 (352)
231 3don_A Shikimate dehydrogenase 97.2 0.00034 1.2E-08 68.6 5.8 64 15-86 91-155 (277)
232 4g65_A TRK system potassium up 97.2 0.00054 1.8E-08 71.9 7.5 92 42-186 2-94 (461)
233 1dih_A Dihydrodipicolinate red 97.2 0.00095 3.3E-08 65.2 8.8 150 42-273 4-155 (273)
234 1up7_A 6-phospho-beta-glucosid 97.2 0.0016 5.5E-08 67.5 10.9 107 42-202 1-146 (417)
235 3jyo_A Quinate/shikimate dehyd 97.1 0.0021 7.3E-08 63.0 11.0 65 15-87 101-166 (283)
236 3u3x_A Oxidoreductase; structu 97.1 0.0016 5.3E-08 65.8 10.1 95 43-203 26-124 (361)
237 1npy_A Hypothetical shikimate 97.1 0.0013 4.3E-08 64.3 8.8 66 14-87 93-158 (271)
238 3fhl_A Putative oxidoreductase 97.1 0.0021 7E-08 64.8 10.6 94 42-203 4-101 (362)
239 3gdo_A Uncharacterized oxidore 97.1 0.0016 5.3E-08 65.6 9.6 94 42-203 4-101 (358)
240 3v5n_A Oxidoreductase; structu 97.1 0.0013 4.3E-08 67.8 9.0 99 42-203 36-146 (417)
241 3l9w_A Glutathione-regulated p 97.1 0.0014 4.8E-08 67.8 9.2 40 42-87 3-42 (413)
242 7mdh_A Protein (malate dehydro 97.1 0.0061 2.1E-07 62.2 13.6 42 42-84 31-73 (375)
243 1f06_A MESO-diaminopimelate D- 97.0 0.0015 5E-08 65.1 8.8 36 43-83 3-39 (320)
244 2aef_A Calcium-gated potassium 97.0 0.00091 3.1E-08 62.9 6.5 37 43-86 9-45 (234)
245 3h9u_A Adenosylhomocysteinase; 97.0 0.0018 6E-08 67.4 8.8 107 25-199 194-300 (436)
246 2axq_A Saccharopine dehydrogen 97.0 0.0011 3.6E-08 69.8 7.3 52 19-87 11-62 (467)
247 1v8b_A Adenosylhomocysteinase; 97.0 0.0019 6.5E-08 68.0 9.2 92 41-199 255-346 (479)
248 1jw9_B Molybdopterin biosynthe 97.0 0.0064 2.2E-07 58.3 12.3 34 44-82 32-65 (249)
249 1p77_A Shikimate 5-dehydrogena 97.0 0.0029 9.8E-08 61.4 9.8 66 14-87 92-157 (272)
250 3dty_A Oxidoreductase, GFO/IDH 97.0 0.0015 5.2E-08 66.7 8.1 98 43-203 12-121 (398)
251 3p2y_A Alanine dehydrogenase/p 96.9 0.00077 2.6E-08 69.0 5.8 40 42-87 183-222 (381)
252 4ew6_A D-galactose-1-dehydroge 96.9 0.0018 6E-08 64.7 8.2 88 43-203 25-117 (330)
253 3o9z_A Lipopolysaccaride biosy 96.9 0.0061 2.1E-07 60.3 11.7 96 42-203 2-108 (312)
254 3i23_A Oxidoreductase, GFO/IDH 96.9 0.0032 1.1E-07 63.0 9.8 49 148-203 51-101 (349)
255 3o8q_A Shikimate 5-dehydrogena 96.9 0.0044 1.5E-07 60.8 10.3 67 14-87 99-165 (281)
256 3d64_A Adenosylhomocysteinase; 96.9 0.0025 8.6E-08 67.3 9.1 100 32-199 267-366 (494)
257 2ixa_A Alpha-N-acetylgalactosa 96.9 0.0058 2E-07 63.3 11.7 101 42-202 19-126 (444)
258 2nvw_A Galactose/lactose metab 96.9 0.003 1E-07 66.4 9.6 85 41-181 37-129 (479)
259 3upl_A Oxidoreductase; rossman 96.8 0.01 3.4E-07 62.0 13.1 53 25-87 10-63 (446)
260 4fb5_A Probable oxidoreductase 96.8 0.0048 1.7E-07 61.8 10.5 101 43-203 25-130 (393)
261 3oa2_A WBPB; oxidoreductase, s 96.8 0.0079 2.7E-07 59.6 11.7 96 42-203 2-109 (318)
262 3btv_A Galactose/lactose metab 96.7 0.0023 8E-08 66.3 7.7 85 42-182 19-111 (438)
263 3ff4_A Uncharacterized protein 96.7 0.0054 1.9E-07 52.7 8.3 90 41-203 2-95 (122)
264 3ce6_A Adenosylhomocysteinase; 96.7 0.0033 1.1E-07 66.4 8.3 37 43-85 274-310 (494)
265 2vhw_A Alanine dehydrogenase; 96.7 0.0015 5.3E-08 66.5 5.5 40 41-86 166-205 (377)
266 1gpj_A Glutamyl-tRNA reductase 96.7 0.0036 1.2E-07 64.3 8.3 39 42-86 166-205 (404)
267 1nyt_A Shikimate 5-dehydrogena 96.7 0.011 3.6E-07 57.3 11.2 66 14-87 92-157 (271)
268 1hye_A L-lactate/malate dehydr 96.6 0.012 4.2E-07 58.2 11.8 36 44-83 1-39 (313)
269 1oi7_A Succinyl-COA synthetase 96.6 0.012 4E-07 57.9 11.5 95 41-203 5-102 (288)
270 3oqb_A Oxidoreductase; structu 96.6 0.0037 1.3E-07 63.2 8.1 96 42-203 5-119 (383)
271 4h3v_A Oxidoreductase domain p 96.6 0.007 2.4E-07 60.5 10.1 100 44-203 7-111 (390)
272 3phh_A Shikimate dehydrogenase 96.6 0.0031 1.1E-07 61.5 7.2 61 15-87 96-156 (269)
273 3fbt_A Chorismate mutase and s 96.6 0.0042 1.4E-07 61.0 8.0 65 15-87 96-161 (282)
274 3kb6_A D-lactate dehydrogenase 96.6 0.0023 7.8E-08 64.3 6.2 93 44-203 142-236 (334)
275 5mdh_A Malate dehydrogenase; o 96.6 0.0074 2.5E-07 60.6 9.9 40 42-82 2-44 (333)
276 3n58_A Adenosylhomocysteinase; 96.6 0.011 3.7E-07 61.7 11.2 68 8-83 214-281 (464)
277 2eez_A Alanine dehydrogenase; 96.6 0.0025 8.5E-08 64.7 6.2 40 41-86 164-203 (369)
278 3r6d_A NAD-dependent epimerase 96.5 0.008 2.7E-07 55.4 9.0 38 43-86 4-45 (221)
279 3gvp_A Adenosylhomocysteinase 96.5 0.0047 1.6E-07 64.1 8.0 68 8-83 187-254 (435)
280 4dio_A NAD(P) transhydrogenase 96.5 0.0032 1.1E-07 64.9 6.7 40 42-87 189-228 (405)
281 3dr3_A N-acetyl-gamma-glutamyl 96.4 0.013 4.4E-07 58.9 10.2 42 153-200 68-109 (337)
282 2yv2_A Succinyl-COA synthetase 96.4 0.022 7.6E-07 56.1 11.7 100 36-203 6-109 (297)
283 1lc0_A Biliverdin reductase A; 96.4 0.013 4.5E-07 57.3 9.9 45 152-203 55-101 (294)
284 4gx0_A TRKA domain protein; me 96.4 0.014 4.7E-07 62.2 10.8 55 26-87 332-386 (565)
285 2fp4_A Succinyl-COA ligase [GD 96.3 0.026 8.9E-07 55.9 11.8 94 42-203 12-109 (305)
286 4gmf_A Yersiniabactin biosynth 96.3 0.0036 1.2E-07 63.8 5.7 95 42-202 6-105 (372)
287 2czc_A Glyceraldehyde-3-phosph 96.3 0.016 5.4E-07 58.0 10.2 110 43-200 2-112 (334)
288 3pwz_A Shikimate dehydrogenase 96.3 0.014 4.9E-07 56.8 9.5 67 14-87 92-159 (272)
289 4ina_A Saccharopine dehydrogen 96.2 0.0064 2.2E-07 62.4 7.0 42 43-87 1-42 (405)
290 3h2z_A Mannitol-1-phosphate 5- 96.2 0.0054 1.9E-07 62.8 6.4 117 44-203 1-127 (382)
291 2yv1_A Succinyl-COA ligase [AD 96.2 0.025 8.4E-07 55.7 10.9 94 42-203 12-108 (294)
292 3tnl_A Shikimate dehydrogenase 96.2 0.021 7E-07 56.9 10.2 64 15-86 128-195 (315)
293 1vl6_A Malate oxidoreductase; 96.1 0.011 3.7E-07 60.5 8.0 107 35-200 185-297 (388)
294 3ip3_A Oxidoreductase, putativ 96.1 0.011 3.9E-07 58.6 7.7 48 149-203 54-103 (337)
295 1p9l_A Dihydrodipicolinate red 96.0 0.038 1.3E-06 53.1 11.0 38 160-203 45-82 (245)
296 1ys4_A Aspartate-semialdehyde 96.0 0.016 5.4E-07 58.5 8.7 34 43-81 8-42 (354)
297 1ff9_A Saccharopine reductase; 96.0 0.0085 2.9E-07 62.5 6.7 39 43-87 3-41 (450)
298 1nvm_B Acetaldehyde dehydrogen 96.0 0.033 1.1E-06 55.2 10.6 39 42-84 3-42 (312)
299 1leh_A Leucine dehydrogenase; 96.0 0.018 6.2E-07 58.5 8.8 49 32-86 162-210 (364)
300 1x13_A NAD(P) transhydrogenase 95.9 0.0064 2.2E-07 62.5 5.1 39 43-87 172-210 (401)
301 3qvo_A NMRA family protein; st 95.8 0.019 6.4E-07 53.6 7.6 39 43-86 23-62 (236)
302 3do5_A HOM, homoserine dehydro 95.8 0.019 6.7E-07 57.4 8.1 23 43-65 2-24 (327)
303 4hb9_A Similarities with proba 95.8 0.0078 2.7E-07 59.9 5.1 35 43-83 1-35 (412)
304 3t4e_A Quinate/shikimate dehyd 95.8 0.04 1.4E-06 54.8 10.1 65 14-86 121-189 (312)
305 1cf2_P Protein (glyceraldehyde 95.7 0.033 1.1E-06 55.9 9.6 30 152-181 70-99 (337)
306 1zud_1 Adenylyltransferase THI 95.7 0.062 2.1E-06 51.4 11.1 34 44-82 29-62 (251)
307 3dhn_A NAD-dependent epimerase 95.7 0.028 9.6E-07 51.6 8.4 37 43-85 4-41 (227)
308 3rui_A Ubiquitin-like modifier 95.7 0.032 1.1E-06 56.1 9.2 35 43-82 34-68 (340)
309 1b7g_O Protein (glyceraldehyde 95.7 0.042 1.4E-06 55.2 10.0 34 148-181 65-98 (340)
310 4g65_A TRK system potassium up 95.6 0.06 2.1E-06 56.2 11.3 54 27-87 219-272 (461)
311 3e8x_A Putative NAD-dependent 95.5 0.026 8.7E-07 52.4 7.4 38 43-86 21-59 (236)
312 1lnq_A MTHK channels, potassiu 95.5 0.013 4.3E-07 58.2 5.5 37 43-86 115-151 (336)
313 3kkj_A Amine oxidase, flavin-c 95.5 0.011 3.9E-07 53.0 4.7 32 45-82 4-35 (336)
314 1pjc_A Protein (L-alanine dehy 95.5 0.016 5.4E-07 58.5 6.0 40 42-87 166-205 (361)
315 1y7t_A Malate dehydrogenase; N 95.5 0.029 1E-06 55.5 7.9 40 42-82 3-45 (327)
316 1l7d_A Nicotinamide nucleotide 95.4 0.017 5.8E-07 58.8 6.2 39 42-86 171-209 (384)
317 3h8v_A Ubiquitin-like modifier 95.4 0.11 3.7E-06 51.2 11.6 64 13-82 3-70 (292)
318 3vh1_A Ubiquitin-like modifier 95.4 0.036 1.2E-06 59.7 8.7 35 43-82 327-361 (598)
319 1y8q_A Ubiquitin-like 1 activa 95.4 0.089 3E-06 52.9 11.1 52 26-82 16-70 (346)
320 2ozp_A N-acetyl-gamma-glutamyl 95.3 0.055 1.9E-06 54.4 9.2 34 43-81 4-38 (345)
321 3gpi_A NAD-dependent epimerase 95.2 0.015 5.1E-07 55.6 4.8 36 43-84 3-38 (286)
322 2c5a_A GDP-mannose-3', 5'-epim 95.1 0.0093 3.2E-07 59.8 3.0 59 18-84 6-65 (379)
323 3tum_A Shikimate dehydrogenase 95.1 0.075 2.6E-06 51.6 9.2 67 14-87 98-164 (269)
324 3ius_A Uncharacterized conserv 94.9 0.03 1E-06 53.3 5.8 38 43-86 5-42 (286)
325 1edz_A 5,10-methylenetetrahydr 94.9 0.027 9.4E-07 56.2 5.7 38 41-84 175-213 (320)
326 3ond_A Adenosylhomocysteinase; 94.8 0.1 3.6E-06 54.8 9.9 56 23-85 246-301 (488)
327 1xyg_A Putative N-acetyl-gamma 94.6 0.051 1.7E-06 55.0 7.0 33 44-81 17-50 (359)
328 3c8m_A Homoserine dehydrogenas 94.6 0.096 3.3E-06 52.3 9.0 23 43-65 6-28 (331)
329 4gsl_A Ubiquitin-like modifier 94.6 0.14 4.9E-06 55.2 10.6 35 43-82 326-360 (615)
330 2ejw_A HDH, homoserine dehydro 94.6 0.037 1.3E-06 55.5 5.8 23 43-65 3-25 (332)
331 3mtj_A Homoserine dehydrogenas 94.6 0.11 3.6E-06 54.2 9.4 46 149-200 65-113 (444)
332 3e48_A Putative nucleoside-dip 94.6 0.058 2E-06 51.4 6.9 38 44-86 1-39 (289)
333 2x4g_A Nucleoside-diphosphate- 94.6 0.044 1.5E-06 53.3 6.2 37 43-85 13-50 (342)
334 2nqt_A N-acetyl-gamma-glutamyl 94.6 0.067 2.3E-06 54.0 7.7 37 157-200 77-113 (352)
335 3ew7_A LMO0794 protein; Q8Y8U8 94.5 0.042 1.4E-06 49.9 5.5 37 44-86 1-38 (221)
336 2a9f_A Putative malic enzyme ( 94.4 0.041 1.4E-06 56.4 5.6 111 35-200 181-292 (398)
337 3h5n_A MCCB protein; ubiquitin 94.4 0.18 6.3E-06 50.7 10.4 35 43-82 118-152 (353)
338 2ep5_A 350AA long hypothetical 94.3 0.16 5.5E-06 51.0 9.9 33 42-79 3-36 (350)
339 1j5p_A Aspartate dehydrogenase 94.3 0.068 2.3E-06 51.6 6.7 45 149-199 49-93 (253)
340 2xdo_A TETX2 protein; tetracyc 94.3 0.042 1.4E-06 55.3 5.5 36 42-83 25-60 (398)
341 3dfz_A SIRC, precorrin-2 dehyd 94.3 0.1 3.4E-06 49.4 7.7 37 40-82 28-64 (223)
342 3slg_A PBGP3 protein; structur 94.2 0.047 1.6E-06 54.1 5.6 57 19-86 6-63 (372)
343 2rgh_A Alpha-glycerophosphate 94.2 0.051 1.7E-06 58.1 6.2 48 25-82 18-65 (571)
344 1qyc_A Phenylcoumaran benzylic 94.2 0.06 2.1E-06 51.6 6.1 35 43-83 4-39 (308)
345 3hsk_A Aspartate-semialdehyde 94.2 0.093 3.2E-06 53.5 7.8 37 158-200 91-127 (381)
346 3h2s_A Putative NADH-flavin re 94.1 0.051 1.8E-06 49.6 5.2 37 44-86 1-38 (224)
347 3rp8_A Flavoprotein monooxygen 94.1 0.048 1.6E-06 54.9 5.4 36 42-83 22-57 (407)
348 1tt5_B Ubiquitin-activating en 94.1 0.24 8.1E-06 51.4 10.7 34 44-82 41-74 (434)
349 3ihm_A Styrene monooxygenase A 94.0 0.042 1.4E-06 56.3 4.9 33 44-82 23-55 (430)
350 2gas_A Isoflavone reductase; N 94.0 0.071 2.4E-06 51.1 6.3 34 43-82 2-36 (307)
351 3c1o_A Eugenol synthase; pheny 94.0 0.07 2.4E-06 51.7 6.2 35 42-82 3-38 (321)
352 3v76_A Flavoprotein; structura 94.0 0.04 1.4E-06 56.6 4.6 35 43-83 27-61 (417)
353 2yyy_A Glyceraldehyde-3-phosph 93.9 0.24 8.1E-06 49.8 10.1 23 43-65 2-24 (343)
354 1qyd_A Pinoresinol-lariciresin 93.9 0.081 2.8E-06 50.9 6.3 34 43-82 4-38 (313)
355 1ryi_A Glycine oxidase; flavop 93.8 0.048 1.6E-06 54.0 4.8 35 42-82 16-50 (382)
356 2bka_A CC3, TAT-interacting pr 93.8 0.092 3.1E-06 48.5 6.3 37 44-86 19-58 (242)
357 3pwk_A Aspartate-semialdehyde 93.7 0.16 5.3E-06 51.6 8.4 38 157-200 61-98 (366)
358 1tt5_A APPBP1, amyloid protein 93.6 0.36 1.2E-05 51.4 11.3 51 27-82 13-66 (531)
359 3m2p_A UDP-N-acetylglucosamine 93.6 0.094 3.2E-06 50.6 6.3 34 43-82 2-36 (311)
360 2ywl_A Thioredoxin reductase r 93.6 0.071 2.4E-06 47.2 5.0 33 44-82 2-34 (180)
361 4dpk_A Malonyl-COA/succinyl-CO 93.5 0.14 4.9E-06 51.7 7.6 37 158-200 77-113 (359)
362 4dpl_A Malonyl-COA/succinyl-CO 93.5 0.14 4.9E-06 51.7 7.6 37 158-200 77-113 (359)
363 3ing_A Homoserine dehydrogenas 93.5 0.17 5.7E-06 50.5 7.9 23 43-65 4-26 (325)
364 4b4o_A Epimerase family protei 93.4 0.076 2.6E-06 51.0 5.3 34 44-83 1-35 (298)
365 2ph5_A Homospermidine synthase 93.4 0.19 6.5E-06 52.7 8.5 39 43-83 13-51 (480)
366 1c0p_A D-amino acid oxidase; a 93.4 0.092 3.1E-06 51.8 5.9 34 43-82 6-39 (363)
367 1yvv_A Amine oxidase, flavin-c 93.3 0.066 2.3E-06 51.9 4.7 33 44-82 3-35 (336)
368 3eag_A UDP-N-acetylmuramate:L- 93.3 0.17 5.7E-06 50.1 7.6 35 42-82 3-38 (326)
369 2r6j_A Eugenol synthase 1; phe 93.3 0.18 6.1E-06 48.8 7.7 34 44-83 12-46 (318)
370 2qa1_A PGAE, polyketide oxygen 93.2 0.071 2.4E-06 56.0 5.1 36 42-83 10-45 (500)
371 3ngx_A Bifunctional protein fo 93.2 0.12 4E-06 50.5 6.2 33 43-81 150-183 (276)
372 1ebf_A Homoserine dehydrogenas 93.2 0.12 4.3E-06 52.1 6.6 24 42-65 3-26 (358)
373 1y8q_B Anthracycline-, ubiquit 93.1 0.89 3.1E-05 49.3 13.5 34 44-82 18-51 (640)
374 3qj4_A Renalase; FAD/NAD(P)-bi 93.1 0.069 2.4E-06 52.4 4.5 33 44-82 2-37 (342)
375 3nrn_A Uncharacterized protein 93.1 0.082 2.8E-06 53.4 5.1 33 44-82 1-33 (421)
376 3i6i_A Putative leucoanthocyan 93.0 0.13 4.3E-06 50.6 6.2 34 43-82 10-44 (346)
377 3dje_A Fructosyl amine: oxygen 93.0 0.097 3.3E-06 53.1 5.5 34 43-82 6-40 (438)
378 3oz2_A Digeranylgeranylglycero 93.0 0.076 2.6E-06 52.2 4.5 33 45-83 6-38 (397)
379 1nvt_A Shikimate 5'-dehydrogen 92.9 0.17 5.7E-06 49.2 6.8 65 14-87 101-165 (287)
380 3p2o_A Bifunctional protein fo 92.8 0.19 6.4E-06 49.3 7.0 33 43-81 160-193 (285)
381 2r00_A Aspartate-semialdehyde 92.8 0.27 9.3E-06 49.1 8.4 34 43-79 3-37 (336)
382 3dqp_A Oxidoreductase YLBE; al 92.8 0.088 3E-06 48.1 4.5 36 44-85 1-37 (219)
383 3ka7_A Oxidoreductase; structu 92.8 0.094 3.2E-06 52.7 5.1 33 44-82 1-33 (425)
384 1lu9_A Methylene tetrahydromet 92.7 0.19 6.4E-06 48.6 6.9 39 43-87 119-158 (287)
385 3f8d_A Thioredoxin reductase ( 92.7 0.11 3.9E-06 49.5 5.2 33 43-81 15-47 (323)
386 1hdo_A Biliverdin IX beta redu 92.6 0.14 4.7E-06 45.7 5.4 36 44-85 4-40 (206)
387 3l07_A Bifunctional protein fo 92.6 0.2 7E-06 49.0 6.9 33 42-80 160-193 (285)
388 2csu_A 457AA long hypothetical 92.6 0.24 8.2E-06 51.6 7.9 89 43-201 8-100 (457)
389 2gv8_A Monooxygenase; FMO, FAD 92.6 0.11 3.7E-06 53.3 5.2 35 42-82 5-41 (447)
390 2e4g_A Tryptophan halogenase; 92.6 0.12 4E-06 54.8 5.7 35 42-82 24-61 (550)
391 1sb8_A WBPP; epimerase, 4-epim 92.5 0.11 3.7E-06 51.1 5.0 56 19-83 4-62 (352)
392 2gf3_A MSOX, monomeric sarcosi 92.5 0.11 3.7E-06 51.5 4.9 34 43-82 3-36 (389)
393 3dme_A Conserved exported prot 92.5 0.11 3.7E-06 50.7 4.8 34 43-82 4-37 (369)
394 4a26_A Putative C-1-tetrahydro 92.4 0.16 5.4E-06 50.2 5.9 33 43-81 165-198 (300)
395 1a4i_A Methylenetetrahydrofola 92.4 0.26 9E-06 48.6 7.5 34 41-80 163-197 (301)
396 2vou_A 2,6-dihydroxypyridine h 92.3 0.13 4.4E-06 51.6 5.3 35 43-83 5-39 (397)
397 3fbs_A Oxidoreductase; structu 92.3 0.13 4.6E-06 48.4 5.2 33 44-82 3-35 (297)
398 4dgk_A Phytoene dehydrogenase; 92.3 0.09 3.1E-06 54.3 4.2 34 43-82 1-34 (501)
399 3ruf_A WBGU; rossmann fold, UD 92.2 0.16 5.4E-06 49.7 5.8 47 28-83 13-60 (351)
400 2r0c_A REBC; flavin adenine di 92.2 0.096 3.3E-06 55.5 4.4 35 43-83 26-60 (549)
401 3tz6_A Aspartate-semialdehyde 92.1 0.36 1.2E-05 48.5 8.3 38 157-200 60-97 (344)
402 2uzz_A N-methyl-L-tryptophan o 92.0 0.1 3.6E-06 51.3 4.2 33 44-82 3-35 (372)
403 1b0a_A Protein (fold bifunctio 92.0 0.33 1.1E-05 47.6 7.6 36 40-81 156-192 (288)
404 3nkl_A UDP-D-quinovosamine 4-d 92.0 0.61 2.1E-05 39.5 8.6 35 42-81 3-38 (141)
405 3cmm_A Ubiquitin-activating en 91.9 0.33 1.1E-05 55.5 8.5 56 26-82 405-464 (1015)
406 1y56_B Sarcosine oxidase; dehy 91.9 0.13 4.5E-06 50.8 4.8 34 43-82 5-38 (382)
407 3cmm_A Ubiquitin-activating en 91.9 0.61 2.1E-05 53.3 10.7 52 26-82 7-61 (1015)
408 2q7v_A Thioredoxin reductase; 91.9 0.14 4.8E-06 49.5 4.8 33 43-81 8-40 (325)
409 4a5o_A Bifunctional protein fo 91.9 0.25 8.5E-06 48.4 6.5 32 43-80 161-193 (286)
410 3itj_A Thioredoxin reductase 1 91.8 0.11 3.9E-06 49.9 4.1 35 42-82 21-55 (338)
411 2x3n_A Probable FAD-dependent 91.8 0.12 4.2E-06 51.6 4.5 35 43-83 6-40 (399)
412 2jae_A L-amino acid oxidase; o 91.7 0.15 5.2E-06 52.5 5.2 35 42-82 10-44 (489)
413 1k0i_A P-hydroxybenzoate hydro 91.7 0.14 4.8E-06 51.0 4.8 34 44-83 3-36 (394)
414 3alj_A 2-methyl-3-hydroxypyrid 91.7 0.16 5.5E-06 50.5 5.2 35 43-83 11-45 (379)
415 3nks_A Protoporphyrinogen oxid 91.7 0.13 4.6E-06 52.5 4.7 34 43-82 2-37 (477)
416 3h8l_A NADH oxidase; membrane 91.6 0.16 5.5E-06 51.2 5.1 35 43-83 1-38 (409)
417 1u8f_O GAPDH, glyceraldehyde-3 91.6 0.26 8.8E-06 49.3 6.5 23 43-65 3-25 (335)
418 1vkn_A N-acetyl-gamma-glutamyl 91.6 0.41 1.4E-05 48.2 8.0 40 153-200 71-110 (351)
419 2oln_A NIKD protein; flavoprot 91.6 0.15 5.1E-06 50.9 4.8 33 44-82 5-37 (397)
420 2wm3_A NMRA-like family domain 91.5 0.28 9.7E-06 46.9 6.5 37 43-84 5-42 (299)
421 2hjs_A USG-1 protein homolog; 91.5 0.42 1.4E-05 47.8 8.0 23 43-65 6-29 (340)
422 1xgk_A Nitrogen metabolite rep 91.5 0.57 2E-05 46.5 8.9 37 43-85 5-42 (352)
423 3oh8_A Nucleoside-diphosphate 91.3 0.29 9.8E-06 51.4 6.9 36 43-84 147-183 (516)
424 3nix_A Flavoprotein/dehydrogen 91.3 0.14 4.9E-06 51.3 4.3 33 44-82 6-38 (421)
425 2q1s_A Putative nucleotide sug 91.3 0.18 6.1E-06 50.2 5.0 54 25-83 14-68 (377)
426 1mo9_A ORF3; nucleotide bindin 91.3 0.26 9E-06 51.7 6.6 35 42-82 42-76 (523)
427 3pzr_A Aspartate-semialdehyde 91.3 1.1 3.8E-05 45.4 10.9 39 153-198 58-98 (370)
428 2bi7_A UDP-galactopyranose mut 91.3 0.19 6.6E-06 50.7 5.3 34 44-83 4-37 (384)
429 3cgv_A Geranylgeranyl reductas 91.2 0.17 6E-06 50.0 4.8 34 44-83 5-38 (397)
430 2iid_A L-amino-acid oxidase; f 91.1 0.36 1.2E-05 49.8 7.2 35 42-82 32-66 (498)
431 3c96_A Flavin-containing monoo 91.1 0.2 6.8E-06 50.5 5.2 34 44-83 5-39 (410)
432 3r9u_A Thioredoxin reductase; 91.1 0.19 6.4E-06 47.8 4.7 34 42-81 3-37 (315)
433 2i0z_A NAD(FAD)-utilizing dehy 91.1 0.17 5.9E-06 51.9 4.7 36 42-83 25-60 (447)
434 2bry_A NEDD9 interacting prote 91.1 0.34 1.2E-05 50.7 7.0 37 41-83 90-126 (497)
435 2o7s_A DHQ-SDH PR, bifunctiona 91.0 0.35 1.2E-05 51.2 7.2 38 44-87 365-402 (523)
436 3uw3_A Aspartate-semialdehyde 91.0 0.97 3.3E-05 45.9 10.1 40 153-199 62-103 (377)
437 2pyx_A Tryptophan halogenase; 90.9 0.19 6.4E-06 52.8 4.9 35 42-82 6-52 (526)
438 2nvu_B Maltose binding protein 90.8 0.94 3.2E-05 50.2 10.7 34 44-82 412-445 (805)
439 3g3e_A D-amino-acid oxidase; F 90.8 0.21 7.1E-06 49.0 4.9 38 44-82 1-39 (351)
440 3rih_A Short chain dehydrogena 90.7 0.34 1.2E-05 47.0 6.3 63 19-87 6-80 (293)
441 2weu_A Tryptophan 5-halogenase 90.7 0.2 6.7E-06 52.2 4.8 34 43-82 2-38 (511)
442 2zbw_A Thioredoxin reductase; 90.6 0.22 7.5E-06 48.2 4.8 34 43-82 5-38 (335)
443 2dvm_A Malic enzyme, 439AA lon 90.4 0.34 1.2E-05 50.3 6.3 35 44-81 187-225 (439)
444 3vps_A TUNA, NAD-dependent epi 90.4 0.25 8.6E-06 47.3 4.9 36 42-83 6-42 (321)
445 3k7m_X 6-hydroxy-L-nicotine ox 90.3 0.23 7.7E-06 50.1 4.7 33 44-82 2-34 (431)
446 2qa2_A CABE, polyketide oxygen 90.3 0.24 8.3E-06 51.8 5.1 36 42-83 11-46 (499)
447 3i3l_A Alkylhalidase CMLS; fla 90.3 0.18 6.1E-06 54.2 4.2 33 44-82 24-56 (591)
448 3d1c_A Flavin-containing putat 90.3 0.23 7.8E-06 48.7 4.7 34 43-82 4-38 (369)
449 1t4b_A Aspartate-semialdehyde 90.3 1.4 4.7E-05 44.6 10.5 40 153-199 59-100 (367)
450 2b69_A UDP-glucuronate decarbo 90.3 0.29 1E-05 47.7 5.4 37 41-83 25-62 (343)
451 3lzw_A Ferredoxin--NADP reduct 90.2 0.14 4.7E-06 49.2 2.9 34 43-82 7-40 (332)
452 3ppi_A 3-hydroxyacyl-COA dehyd 90.1 0.32 1.1E-05 46.3 5.5 38 44-87 31-69 (281)
453 1xg5_A ARPG836; short chain de 90.1 0.31 1.1E-05 46.3 5.3 37 44-86 33-70 (279)
454 3lk7_A UDP-N-acetylmuramoylala 90.1 0.6 2.1E-05 48.2 7.8 35 43-83 9-43 (451)
455 1y0p_A Fumarate reductase flav 90.0 0.27 9.4E-06 52.1 5.3 53 24-82 107-159 (571)
456 2aqj_A Tryptophan halogenase, 90.0 0.29 1E-05 51.4 5.5 34 43-82 5-41 (538)
457 4g6h_A Rotenone-insensitive NA 89.9 0.2 6.9E-06 52.6 4.1 38 40-83 39-76 (502)
458 3k31_A Enoyl-(acyl-carrier-pro 89.8 0.42 1.4E-05 46.2 6.0 60 19-84 6-68 (296)
459 1yb1_A 17-beta-hydroxysteroid 89.8 0.51 1.8E-05 44.7 6.5 38 43-86 31-69 (272)
460 3fmw_A Oxygenase; mithramycin, 89.7 0.24 8.1E-06 52.9 4.5 34 44-83 50-83 (570)
461 1vdc_A NTR, NADPH dependent th 89.7 0.16 5.5E-06 49.1 2.9 32 43-80 8-39 (333)
462 4a9w_A Monooxygenase; baeyer-v 89.6 0.27 9.2E-06 47.5 4.5 34 44-83 4-37 (357)
463 2vdc_G Glutamate synthase [NAD 89.4 0.57 2E-05 48.5 7.1 36 42-83 121-156 (456)
464 4gx0_A TRKA domain protein; me 89.4 0.34 1.2E-05 51.3 5.5 42 40-87 124-165 (565)
465 4eso_A Putative oxidoreductase 89.4 0.55 1.9E-05 44.3 6.4 43 39-87 4-47 (255)
466 3ko8_A NAD-dependent epimerase 89.4 0.36 1.2E-05 46.2 5.2 35 44-84 1-36 (312)
467 1xq6_A Unknown protein; struct 89.4 0.52 1.8E-05 43.2 6.1 39 43-85 4-43 (253)
468 3lxd_A FAD-dependent pyridine 89.4 0.32 1.1E-05 49.2 5.0 35 42-82 8-44 (415)
469 3d7l_A LIN1944 protein; APC893 89.3 0.39 1.3E-05 43.0 5.0 35 42-83 2-37 (202)
470 1xhl_A Short-chain dehydrogena 89.3 0.39 1.3E-05 46.5 5.4 61 14-87 4-65 (297)
471 2ivd_A PPO, PPOX, protoporphyr 89.2 0.26 8.9E-06 50.4 4.3 39 38-82 11-49 (478)
472 3p1w_A Rabgdi protein; GDI RAB 89.2 0.19 6.3E-06 52.8 3.1 34 43-82 20-53 (475)
473 2b0j_A 5,10-methenyltetrahydro 89.2 5.6 0.00019 39.0 13.1 119 146-280 127-248 (358)
474 4id9_A Short-chain dehydrogena 89.2 0.32 1.1E-05 47.4 4.7 37 41-83 17-54 (347)
475 2bc0_A NADH oxidase; flavoprot 89.2 0.19 6.5E-06 52.3 3.2 62 19-83 7-72 (490)
476 2jl1_A Triphenylmethane reduct 89.1 0.24 8.3E-06 46.8 3.7 37 44-85 1-39 (287)
477 3nyc_A D-arginine dehydrogenas 88.9 0.25 8.6E-06 48.4 3.8 33 43-82 9-41 (381)
478 3h28_A Sulfide-quinone reducta 88.9 0.38 1.3E-05 48.9 5.2 34 44-83 3-38 (430)
479 2q0l_A TRXR, thioredoxin reduc 88.9 0.34 1.2E-05 46.2 4.6 32 44-81 2-34 (311)
480 2xve_A Flavin-containing monoo 88.8 0.34 1.2E-05 50.1 4.9 34 44-83 3-42 (464)
481 2e1m_A L-glutamate oxidase; L- 88.7 0.82 2.8E-05 46.4 7.4 34 42-81 43-76 (376)
482 3c4a_A Probable tryptophan hyd 88.6 0.42 1.4E-05 47.7 5.1 35 44-83 1-36 (381)
483 2c2x_A Methylenetetrahydrofola 88.5 0.63 2.2E-05 45.4 6.1 37 40-80 155-192 (281)
484 3e1t_A Halogenase; flavoprotei 88.5 0.27 9.3E-06 51.4 3.8 33 44-82 8-40 (512)
485 3awd_A GOX2181, putative polyo 88.4 0.61 2.1E-05 43.4 5.9 38 43-86 13-51 (260)
486 3o38_A Short chain dehydrogena 88.4 0.55 1.9E-05 44.2 5.6 40 42-87 21-62 (266)
487 2cul_A Glucose-inhibited divis 88.3 0.46 1.6E-05 44.1 4.9 33 44-82 4-36 (232)
488 1dxl_A Dihydrolipoamide dehydr 88.3 0.46 1.6E-05 48.7 5.4 35 42-82 5-39 (470)
489 3tjr_A Short chain dehydrogena 88.2 0.71 2.4E-05 44.7 6.4 39 43-87 31-70 (301)
490 3urh_A Dihydrolipoyl dehydroge 88.2 0.43 1.5E-05 49.4 5.1 33 44-82 26-58 (491)
491 3ihg_A RDME; flavoenzyme, anth 88.1 0.41 1.4E-05 50.2 4.9 35 43-83 5-39 (535)
492 3ab1_A Ferredoxin--NADP reduct 88.1 0.45 1.5E-05 46.7 4.9 34 43-82 14-47 (360)
493 3pvc_A TRNA 5-methylaminomethy 88.1 0.41 1.4E-05 52.1 5.0 33 44-82 265-297 (689)
494 2rhc_B Actinorhodin polyketide 87.9 0.56 1.9E-05 44.7 5.3 37 44-86 23-60 (277)
495 3sx6_A Sulfide-quinone reducta 87.8 0.44 1.5E-05 48.6 4.8 35 43-83 4-41 (437)
496 3cty_A Thioredoxin reductase; 87.8 0.49 1.7E-05 45.4 5.0 32 44-81 17-48 (319)
497 2b4q_A Rhamnolipids biosynthes 87.8 0.48 1.7E-05 45.3 4.8 37 44-86 30-67 (276)
498 2dkn_A 3-alpha-hydroxysteroid 87.8 0.52 1.8E-05 43.4 5.0 35 44-84 2-37 (255)
499 2c20_A UDP-glucose 4-epimerase 87.7 0.56 1.9E-05 45.2 5.3 35 43-83 1-36 (330)
500 3ioy_A Short-chain dehydrogena 87.7 0.76 2.6E-05 45.0 6.3 44 38-87 3-47 (319)
No 1
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-65 Score=525.89 Aligned_cols=334 Identities=20% Similarity=0.300 Sum_probs=281.2
Q ss_pred CCCCceEEEECccHHHHHHHHHHHHhcCC---CCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccch
Q 012547 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGY---LRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKY 116 (461)
Q Consensus 40 ~~~~mkI~IIGaGamG~alA~~La~~~G~---~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~ 116 (461)
..++.||+|||+|+||+|+|..|+++ |. ....++|++|.|+++... +.+.+.|+..+ +|++|||+
T Consensus 31 ~~~p~KI~ViGaGsWGTALA~~la~n-g~~~~~~~~~~V~lw~r~~e~~~----~~~~e~in~~~-------~N~~YLpg 98 (391)
T 4fgw_A 31 AEKPFKVTVIGSGNWGTTIAKVVAEN-CKGYPEVFAPIVQMWVFEEEING----EKLTEIINTRH-------QNVKYLPG 98 (391)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHH-HHHCTTTEEEEEEEECCCCBSSS----CBHHHHHTTTC-------CBTTTBTT
T ss_pred cCCCCeEEEECcCHHHHHHHHHHHHc-CCCccccCCceEEEEEcchHhhh----HHHHHHHHhcC-------cCcccCCC
Confidence 33567999999999999999999998 60 000025999999986432 23445566655 59999987
Q ss_pred hhhhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEE
Q 012547 117 VEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISL 196 (461)
Q Consensus 117 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~ 196 (461)
++ || .++.+++|+++++++||+||++||+++++++++++.+++++ ++++|++
T Consensus 99 v~-------Lp------------------~~i~~t~dl~~al~~ad~ii~avPs~~~r~~l~~l~~~~~~---~~~iv~~ 150 (391)
T 4fgw_A 99 IT-------LP------------------DNLVANPDLIDSVKDVDIIVFNIPHQFLPRICSQLKGHVDS---HVRAISC 150 (391)
T ss_dssp CC-------CC------------------SSEEEESCHHHHHTTCSEEEECSCGGGHHHHHHHHTTTSCT---TCEEEEC
T ss_pred Cc-------CC------------------CCcEEeCCHHHHHhcCCEEEEECChhhhHHHHHHhccccCC---CceeEEe
Confidence 62 32 26899999999999999999999999999999999999887 7899999
Q ss_pred eecCccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEe-CCh---------hHHHHHHHHhcC
Q 012547 197 AKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARIC-GAE---------KWRKPLAKFLRR 266 (461)
Q Consensus 197 tkGi~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~-~~~---------~~~~~l~~ll~~ 266 (461)
+||++..+ +..+++++++.+.++ .++++++|||||.|++.+.|+.++++ .+. ...+.++++|++
T Consensus 151 ~KGie~~~---~~~~~~se~i~e~~~---~~~~vLsGPs~A~EVa~~~pta~~iA~~~~~~~~~~~~~~~a~~~~~lf~~ 224 (391)
T 4fgw_A 151 LKGFEVGA---KGVQLLSSYITEELG---IQCGALSGANIATEVAQEHWSETTVAYHIPKDFRGEGKDVDHKVLKALFHR 224 (391)
T ss_dssp CCSCEEET---TEEECHHHHHHHHHC---CEEEEEECSCCHHHHHTTCCEEEEEECCCCTTCCCSSSSCCHHHHHHHHCB
T ss_pred cccccccc---ccchhHHHHHHHHhC---ccceeccCCchHHHhhcCCCceEEEEecChhhhhhhhHHHHHHHHHHHhCC
Confidence 99998753 134789999999887 35789999999999999999987753 322 236889999999
Q ss_pred CCceEEecCChHHHHHHHHHHHHHHHHHhhccC---ccchHHHHHHHHHHHHHHHHHHh---CCCchhhccC-hhhhhhh
Q 012547 267 PHFTVWDNGDLVTHEVMGGLKNVYAIGAALTNE---SATSKSVYFAHCTSEMVFITHLL---AEEPEKLAGP-LLADTYV 339 (461)
Q Consensus 267 ~g~~v~~s~Di~gve~~galKNv~Ai~~Gi~~g---~~n~~a~l~~~~~~Em~~l~~a~---G~~~~t~~g~-glgDl~~ 339 (461)
++|++|.++|++|+|+||++||||||++|+++| |+|++|++++++++||.+|+.++ |.++.||.++ |+|||++
T Consensus 225 ~~frvy~s~DviGvElgGAlKNViAIAaGi~dGlg~G~NakAALitrGl~Em~rlg~al~~~g~~~tt~~glaGlGDLi~ 304 (391)
T 4fgw_A 225 PYFHVSVIEDVAGISICGALKNVVALGCGFVEGLGWGNNASAAIQRVGLGEIIRFGQMFFPESREETYYQESAGVADLIT 304 (391)
T ss_dssp TTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHSTTTHHHHHH
T ss_pred CCEEEEEeCCccceehHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHhcccCCceeecCCCcccceeE
Confidence 999999999999999999999999999999997 69999999999999999999999 4455567787 9999999
Q ss_pred hccccchhHHHHHHhc-CCChhhHhhhhcCCCccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHh
Q 012547 340 TLLKGRNAWYGQELAK-GRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILI 418 (461)
Q Consensus 340 T~~~sRN~~~G~~l~~-g~~~~~~~~~~~~~~~vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~il~ 418 (461)
||+.||||+||..|++ |++.+++++.+.+++++||+.|+++++++++++|+. .+ |||+++||+||+
T Consensus 305 Tc~sSRNr~~G~~lg~~G~~~~~~~~~~~~g~v~EGv~ta~~v~~l~~~~~v~------------~e-mPI~~~vy~IL~ 371 (391)
T 4fgw_A 305 TCAGGRNVKVARLMATSGKDAWECEKELLNGQSAQGLITCKEVHEWLETCGSV------------ED-FPLFEAVYQIVY 371 (391)
T ss_dssp HHHSSHHHHHHHHHHHTCCCHHHHHHHHHTTCCCTHHHHHHHHHHHHHHHTCS------------TT-CHHHHHHHHHHH
T ss_pred EecCCccHHHHHHHHhcCCCHHHHHHHHhCCCEEehHHHHHHHHHHHHHcCCC------------CC-CCHHHHHHHHHh
Confidence 9988999999999996 899888887776667899999999999999999962 25 899999999999
Q ss_pred cCCCHHHHHHHHHhc
Q 012547 419 MRESPIQAILEALRD 433 (461)
Q Consensus 419 ~~~~~~~~~~~~l~~ 433 (461)
++.+|.+ +.++|++
T Consensus 372 ~~~~~~~-~~~~l~~ 385 (391)
T 4fgw_A 372 NNYPMKN-LPDMIEE 385 (391)
T ss_dssp SCCCSTT-HHHHHCC
T ss_pred CCCCHHH-HHHHHHh
Confidence 9997655 4455543
No 2
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=100.00 E-value=4.4e-60 Score=484.79 Aligned_cols=322 Identities=22% Similarity=0.333 Sum_probs=287.1
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
.+|||+|||+|+||+++|..|+++ | ++|++|+|++++++.+++.+ .|+.|++++
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~-G-----~~V~l~~r~~~~~~~i~~~~----------------~~~~~l~g~---- 81 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARK-G-----QKVRLWSYESDHVDEMQAEG----------------VNNRYLPNY---- 81 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTT-T-----CCEEEECSCHHHHHHHHHHS----------------SBTTTBTTC----
T ss_pred cCCeEEEECccHHHHHHHHHHHHC-C-----CeEEEEeCCHHHHHHHHHcC----------------CCcccCCCC----
Confidence 358999999999999999999999 8 99999999988777543321 366777754
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecCc
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~ 201 (461)
.++ .++.+++|++++++++|+||+|||+++++++++++.+++++ ++++|+++||++
T Consensus 82 ---~l~------------------~~i~~t~d~~ea~~~aDvVilaVp~~~~~~vl~~i~~~l~~---~~ivvs~~kGi~ 137 (356)
T 3k96_A 82 ---PFP------------------ETLKAYCDLKASLEGVTDILIVVPSFAFHEVITRMKPLIDA---KTRIAWGTKGLA 137 (356)
T ss_dssp ---CCC------------------TTEEEESCHHHHHTTCCEEEECCCHHHHHHHHHHHGGGCCT---TCEEEECCCSCB
T ss_pred ---ccC------------------CCeEEECCHHHHHhcCCEEEECCCHHHHHHHHHHHHHhcCC---CCEEEEEeCCCC
Confidence 221 25788999999999999999999999999999999999987 789999999999
Q ss_pred cccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEE-eCChhHHHHHHHHhcCCCceEEecCChHHH
Q 012547 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARI-CGAEKWRKPLAKFLRRPHFTVWDNGDLVTH 280 (461)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~-~~~~~~~~~l~~ll~~~g~~v~~s~Di~gv 280 (461)
+. + ..+++++++.++. .++++++||+++.|++.+.++.+++ +.+++..+.++++|++.+|++|.++|++|+
T Consensus 138 ~~-----t-~~~se~i~~~l~~--~~~~vlsgP~~a~ev~~g~pt~~via~~~~~~~~~v~~lf~~~~~rv~~~~Di~g~ 209 (356)
T 3k96_A 138 KG-----S-RLLHEVVATELGQ--VPMAVISGPSLATEVAANLPTAVSLASNNSQFSKDLIERLHGQRFRVYKNDDMIGV 209 (356)
T ss_dssp TT-----T-BCHHHHHHHHHCS--CCEEEEESSCCHHHHHTTCCEEEEEEESCHHHHHHHHHHHCCSSEEEEEESCHHHH
T ss_pred cC-----c-cCHHHHHHHHcCC--CCEEEEECccHHHHHHcCCCeEEEEecCCHHHHHHHHHHhCCCCeeEEEeCCHHHH
Confidence 87 5 8899999998873 4678999999999999999887765 567888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccC---ccchHHHHHHHHHHHHHHHHHHhCCCchhhccC-hhhhhhhhcc--ccchhHHHHHHh
Q 012547 281 EVMGGLKNVYAIGAALTNE---SATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP-LLADTYVTLL--KGRNAWYGQELA 354 (461)
Q Consensus 281 e~~galKNv~Ai~~Gi~~g---~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g~-glgDl~~T~~--~sRN~~~G~~l~ 354 (461)
||+|++||++|+++|++++ ++|+++++++++++||.+|++++|++++||+++ |+|||++||+ .||||++|.+|+
T Consensus 210 e~~galkNviaia~G~~~gl~~g~N~~aal~~~~l~E~~~l~~a~G~~~~t~~gl~g~gDl~~tc~s~~sRN~~~G~~l~ 289 (356)
T 3k96_A 210 ELCGSVKNILAIATGISDGLKLGSNARAALITRGLTEMGRLVSVFGGKQETLTGLAGLGDLVLTCTDNQSRNRRFGLALG 289 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHTSTTTHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHHHhCCChHhhcccchhhHHHHhccCCCCccHHHHHHHH
Confidence 9999999999999999985 689999999999999999999999999999997 9999999995 599999999999
Q ss_pred cCCChhhHhhhhcCCCccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhcCCCHHHHHHHHHhcc
Q 012547 355 KGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIMRESPIQAILEALRDE 434 (461)
Q Consensus 355 ~g~~~~~~~~~~~~~~~vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~il~~~~~~~~~~~~~l~~~ 434 (461)
+|++.+++++.+ ++++||++|++.++++++++|+ + +||++++|+||+++++|.+++..||.|+
T Consensus 290 ~g~~~~~~~~~~--~~~~eG~~t~~~~~~la~~~~v--------------~-~Pi~~~v~~il~~~~~~~~~~~~l~~r~ 352 (356)
T 3k96_A 290 EGVDKKEAQQAI--GQAIEGLYNTDQVHALAQKHAI--------------E-MPLTFQVHRILHEDLDPQQAVQELLERS 352 (356)
T ss_dssp HTCCHHHHHHHH--CSCCSHHHHHHHHHHHHHHTTC--------------C-CHHHHHHHHHHHSCCCHHHHHHHHHSCC
T ss_pred CCCCHHHHHHHc--CCccchHHHHHHHHHHHHHcCC--------------C-CcHHHHHHHHHhCCCCHHHHHHHHHcCC
Confidence 999998877665 4679999999999999999995 7 8999999999999999999999999999
Q ss_pred cCCC
Q 012547 435 TMND 438 (461)
Q Consensus 435 ~~~~ 438 (461)
.|.|
T Consensus 353 ~~~e 356 (356)
T 3k96_A 353 PKAE 356 (356)
T ss_dssp ----
T ss_pred CCCC
Confidence 9876
No 3
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=100.00 E-value=7.5e-44 Score=365.67 Aligned_cols=340 Identities=22% Similarity=0.324 Sum_probs=277.1
Q ss_pred HHhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCC--CeeEEEEecCch-----hhhhhhhhhHHHHHhhhhhhHH
Q 012547 33 RRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRD--KVLIRIWRRPGR-----SVDRATAEHLFEVINSREDVLR 105 (461)
Q Consensus 33 ~~~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~--~~~V~l~~r~~~-----~~~~~~~~~l~~~i~~~~~~~~ 105 (461)
|+++......+|||+|||+|+||+++|..|+++ |...+ .++|++|+|+++ +++.++ +.+
T Consensus 11 ~~~~~~~~~~~~kI~iIGaG~mG~alA~~L~~~-G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~---------~~~---- 76 (375)
T 1yj8_A 11 RNLFDKLKDGPLKISILGSGNWASAISKVVGTN-AKNNYLFENEVRMWIRDEFVNGERMVDIIN---------NKH---- 76 (375)
T ss_dssp CSHHHHHHHSCBCEEEECCSHHHHHHHHHHHHH-HHHCTTBCSCEEEECCSCC---CCHHHHHH---------HHC----
T ss_pred HHHHhcCccCCCEEEEECcCHHHHHHHHHHHHc-CCccCCCCCeEEEEECChhhhhHHHHHHHH---------hcC----
Confidence 444433333458999999999999999999988 51100 068999999987 554432 211
Q ss_pred hhhhcccccchhhhhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHH---
Q 012547 106 RLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISR--- 182 (461)
Q Consensus 106 ~~~~n~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~--- 182 (461)
.|..|+++. .++ .++.+++|++++++++|+||+|||+++++++++++.+
T Consensus 77 ---~~~~~~~~~-------~~~------------------~~i~~~~~~~ea~~~aDvVilav~~~~~~~vl~~i~~~~~ 128 (375)
T 1yj8_A 77 ---ENTKYLKGV-------PLP------------------HNIVAHSDLASVINDADLLIFIVPCQYLESVLASIKESES 128 (375)
T ss_dssp ---BCTTTSTTC-------BCC------------------TTEEEESSTHHHHTTCSEEEECCCHHHHHHHHHHHTC---
T ss_pred ---cccccCCcc-------cCc------------------CCeEEECCHHHHHcCCCEEEEcCCHHHHHHHHHHHhhhhh
Confidence 234455432 111 2577888998889999999999999999999999998
Q ss_pred -HhhccCCCCEEEEEeecCccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEE-eCChhHHHHH
Q 012547 183 -YWKERITVPVIISLAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARI-CGAEKWRKPL 260 (461)
Q Consensus 183 -~l~~~~~~~iIIs~tkGi~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~-~~~~~~~~~l 260 (461)
++++ ++++|+++||+++.. .+...+++.+.+.++ .++.+++||+++.++..+.++.++. +.+++..+.+
T Consensus 129 ~~l~~---~~ivvs~~~Gi~~~~---~~~~~l~~~l~~~~~---~~~~v~~gp~~a~~v~~g~~~~~~~~~~~~~~~~~v 199 (375)
T 1yj8_A 129 IKIAS---HAKAISLTKGFIVKK---NQMKLCSNYISDFLN---IPCSALSGANIAMDVAMENFSEATIGGNDKDSLVIW 199 (375)
T ss_dssp CCCCT---TCEEEECCCSCEEET---TEEECHHHHHHHHSS---SCEEEEECSCCHHHHHTTCCEEEEEECSCHHHHHHH
T ss_pred ccCCC---CCEEEEeCCccccCC---ccccCHHHHHHHHcC---CCEEEEeCCchHHHHHhCCCeEEEEecCCHHHHHHH
Confidence 8876 789999999998730 034678888887765 3467899999999999988876665 4567788999
Q ss_pred HHHhcCCCceEEecCChHHHHHHHHHHHHHHHHHhhccC---ccchHHHHHHHHHHHHHHHHHHh--CCCchhhccC-hh
Q 012547 261 AKFLRRPHFTVWDNGDLVTHEVMGGLKNVYAIGAALTNE---SATSKSVYFAHCTSEMVFITHLL--AEEPEKLAGP-LL 334 (461)
Q Consensus 261 ~~ll~~~g~~v~~s~Di~gve~~galKNv~Ai~~Gi~~g---~~n~~a~l~~~~~~Em~~l~~a~--G~~~~t~~g~-gl 334 (461)
+++|+..+++++.++|+.+++|++++||++++++|+..+ +.|...+++.++++|+..+++++ |.+++++.++ |+
T Consensus 200 ~~ll~~~g~~~~~~~di~~~~~~k~l~N~~~~~~g~~~~~~~~~n~~~a~~~~~~~E~~~la~a~G~G~~~~~~~~~~g~ 279 (375)
T 1yj8_A 200 QRVFDLPYFKINCVNETIEVEICGALKNIITLACGFCDGLNLPTNSKSAIIRNGINEMILFGKVFFQKFNENILLESCGF 279 (375)
T ss_dssp HHHHCBTTEEEEEESCSHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHSSCCCGGGGGSTTTH
T ss_pred HHHhCCCCeEEEEeCCcHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHhccCCCcchhhccccc
Confidence 999999999999999999999999999999999988764 46777789999999999999999 5899999886 99
Q ss_pred hhhhhhccccchhHHHHHHhc-C--CChhhHhhhhcCCCccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHH
Q 012547 335 ADTYVTLLKGRNAWYGQELAK-G--RLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILK 411 (461)
Q Consensus 335 gDl~~T~~~sRN~~~G~~l~~-g--~~~~~~~~~~~~~~~vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~ 411 (461)
||++.||..|||+++|..+++ | .+.+|+.+.+.+++..||..++++++++++++|++ .+ +|+++
T Consensus 280 ~dl~~t~~~~~~~~~~~~~~~~g~~~~~~d~~~~~~~g~~~E~~~~~~~v~~~a~~~gv~------------~~-~P~~~ 346 (375)
T 1yj8_A 280 ADIITSFLAGRNAKCSAEFIKSTPKKTWEELENEILKGQKLQGTVTLKYVYHMIKEKNMT------------NE-FPLFT 346 (375)
T ss_dssp HHHHHHHSSSSHHHHHHHHHHHTTSSCHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCG------------GG-CHHHH
T ss_pred cceeEeeeCCccHHHHHHHHhcCCCCCHHHHHHhhcCCcEeeHHHHHHHHHHHHHHhCCC------------CC-CCHHH
Confidence 999999988999999999998 8 67667665554566899999999999999999941 06 89999
Q ss_pred HHHHHHhcCCCHHHHHHHHHhcccC
Q 012547 412 MLYKILIMRESPIQAILEALRDETM 436 (461)
Q Consensus 412 ~ly~il~~~~~~~~~~~~~l~~~~~ 436 (461)
++|++++++.+|.+++..||.++.+
T Consensus 347 ~v~~~~~~~~~~~~~~~~l~~~~~~ 371 (375)
T 1yj8_A 347 VLHKISFENEDPSSLLKTFMNNKIN 371 (375)
T ss_dssp HHHHHHHSCCCTTHHHHHHSSCCCC
T ss_pred HHHHHHhCCCCHHHHHHHHHcCcHh
Confidence 9999999999999999999988654
No 4
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=100.00 E-value=1.3e-40 Score=337.58 Aligned_cols=329 Identities=22% Similarity=0.316 Sum_probs=269.2
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCC--CeeEEEEecCch-----hhhhhhhhhHHHHHhhhhhhHHhhhhcccccc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRD--KVLIRIWRRPGR-----SVDRATAEHLFEVINSREDVLRRLIRRCAYLK 115 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~--~~~V~l~~r~~~-----~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~ 115 (461)
+|||+|||+|+||+++|..|+++ |...+ .++|++|+|+++ +++.++ +.+ .+..|++
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~-g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~---------~~~-------~~~~~~~ 70 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGN-AAQLAQFDPRVTMWVFEEDIGGKKLTEIIN---------TQH-------ENVKYLP 70 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-HHHCTTEEEEEEEECCCCBSSSSBHHHHHH---------HHS-------CCTTTST
T ss_pred CCeEEEECCCHHHHHHHHHHHhc-CCcccCCCCeEEEEEcChhhhhhHHHHHHH---------hcC-------cccccCC
Confidence 47999999999999999999988 41000 068999999987 444322 111 1223333
Q ss_pred hhhhhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEE
Q 012547 116 YVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIIS 195 (461)
Q Consensus 116 ~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs 195 (461)
+. .+ ..++.+++|++++++++|+||+|||+++++++++++.+++++ +++||+
T Consensus 71 ~~-------~~------------------~~~~~~~~~~~~~~~~aD~Vilav~~~~~~~v~~~i~~~l~~---~~ivv~ 122 (354)
T 1x0v_A 71 GH-------KL------------------PPNVVAVPDVVQAAEDADILIFVVPHQFIGKICDQLKGHLKA---NATGIS 122 (354)
T ss_dssp TC-------CC------------------CTTEEEESSHHHHHTTCSEEEECCCGGGHHHHHHHHTTCSCT---TCEEEE
T ss_pred cc-------cC------------------ccCeEEEcCHHHHHcCCCEEEEeCCHHHHHHHHHHHHhhCCC---CCEEEE
Confidence 21 11 024677889988899999999999999999999999998876 789999
Q ss_pred EeecCccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEE-eCChhHHHHHHHHhcCCCceEEec
Q 012547 196 LAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARI-CGAEKWRKPLAKFLRRPHFTVWDN 274 (461)
Q Consensus 196 ~tkGi~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~-~~~~~~~~~l~~ll~~~g~~v~~s 274 (461)
++||+..+. .+...+++.+.+.++ .+..+++||+++.++..+.++.++. +.+++..+.++++|+..+++++.+
T Consensus 123 ~~~Gi~~~~---~~~~~l~~~l~~~~~---~~~~v~~gp~~a~~v~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~~~~~~ 196 (354)
T 1x0v_A 123 LIKGVDEGP---NGLKLISEVIGERLG---IPMSVLMGANIASEVADEKFCETTIGCKDPAQGQLLKELMQTPNFRITVV 196 (354)
T ss_dssp CCCCBCSSS---SSCCBHHHHHHHHHT---CCEEEEECSCCHHHHHTTCCEEEEEECSSHHHHHHHHHHHCBTTEEEEEE
T ss_pred ECCccCCCC---CccccHHHHHHHHcC---CCEEEEECCCcHHHHHhcCCceEEEEECCHHHHHHHHHHhCCCCEEEEEc
Confidence 999998510 034667888887775 3467899999999999888766555 456778899999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHHHhhccC---ccchHHHHHHHHHHHHHHHHHHhCC---CchhhccC-hhhhhhhhccccchh
Q 012547 275 GDLVTHEVMGGLKNVYAIGAALTNE---SATSKSVYFAHCTSEMVFITHLLAE---EPEKLAGP-LLADTYVTLLKGRNA 347 (461)
Q Consensus 275 ~Di~gve~~galKNv~Ai~~Gi~~g---~~n~~a~l~~~~~~Em~~l~~a~G~---~~~t~~g~-glgDl~~T~~~sRN~ 347 (461)
+|+.+++|++++||++++++|+..+ +.|...+++..+++|+.++++++|. +++++.++ |++|++.||..|||+
T Consensus 197 ~di~~~~~~k~~~N~~~~~~g~~~~~~~~~n~~~~~~~~~~~E~~~la~a~G~~~~~~~~~~~~~g~~d~~~~~~~~~~~ 276 (354)
T 1x0v_A 197 QEVDTVEICGALKNVVAVGAGFCDGLGFGDNTKAAVIRLGLMEMIAFAKLFCSGPVSSATFLESCGVADLITTCYGGRNR 276 (354)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHSSSCCCGGGGGSTTTHHHHHHHHHHCHHH
T ss_pred CCchHhHHHHHHHHHHHHHHHHHHHccCCccHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccchHHHHHHhhcccccH
Confidence 9999999999999999999988764 4677778899999999999999998 89999886 899999999889999
Q ss_pred HHHHHHhc-CCChhhHhhhhcCCCccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhcCCCHHHH
Q 012547 348 WYGQELAK-GRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIMRESPIQA 426 (461)
Q Consensus 348 ~~G~~l~~-g~~~~~~~~~~~~~~~vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~il~~~~~~~~~ 426 (461)
++|..+++ |++.+++.+.+.+++..||...++.++++++++|+. .+ +|+++++|++++++++|.++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~g~~~E~~~~~g~v~~~a~~~gv~------------~~-~P~~~~v~~~~~~~~~~~~~ 343 (354)
T 1x0v_A 277 KVAEAFARTGKSIEQLEKELLNGQKLQGPETARELYSILQHKGLV------------DK-FPLFMAVYKVCYEGQPVGEF 343 (354)
T ss_dssp HHHHHHHHHCCCHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHTCG------------GG-SHHHHHHHHHHHSCCCGGGT
T ss_pred HHHHHHHhcCCCHHHHHHhhcCCcEeehHHHHHHHHHHHHHhCCC------------CC-CCHHHHHHHHHhCCCCHHHH
Confidence 99999987 888777665554566899999999999999999940 06 89999999999999999999
Q ss_pred HHHHHhccc
Q 012547 427 ILEALRDET 435 (461)
Q Consensus 427 ~~~~l~~~~ 435 (461)
+..||.++.
T Consensus 344 ~~~l~~~~~ 352 (354)
T 1x0v_A 344 IHCLQNHPE 352 (354)
T ss_dssp HHHHHTCCS
T ss_pred HHHHHcCCC
Confidence 999998754
No 5
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=100.00 E-value=1.1e-40 Score=337.07 Aligned_cols=316 Identities=24% Similarity=0.415 Sum_probs=258.6
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
.+|||+|||+|+||+++|..|+++ | ++|++|+|++++++.+++++ .|. |+++..
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~-G-----~~V~~~~r~~~~~~~l~~~g----------------~~~-~~~~~~--- 66 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHEN-G-----EEVILWARRKEIVDLINVSH----------------TSP-YVEESK--- 66 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSHHHHHHHHHHS----------------CBT-TBTTCC---
T ss_pred cCCcEEEECcCHHHHHHHHHHHhC-C-----CeEEEEeCCHHHHHHHHHhC----------------Ccc-cCCCCe---
Confidence 458999999999999999999999 8 99999999988776543221 122 443210
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecCc
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~ 201 (461)
. ++.+++|+++ ++++|+||+|||+++++++++++.+ + ++++|+++||++
T Consensus 67 -----------------------~-~~~~~~~~~~-~~~aDvVil~vk~~~~~~v~~~l~~---~---~~~vv~~~nGi~ 115 (335)
T 1z82_A 67 -----------------------I-TVRATNDLEE-IKKEDILVIAIPVQYIREHLLRLPV---K---PSMVLNLSKGIE 115 (335)
T ss_dssp -----------------------C-CSEEESCGGG-CCTTEEEEECSCGGGHHHHHTTCSS---C---CSEEEECCCCCC
T ss_pred -----------------------e-eEEEeCCHHH-hcCCCEEEEECCHHHHHHHHHHhCc---C---CCEEEEEeCCCC
Confidence 0 3567788888 8999999999999999999988876 4 689999999999
Q ss_pred cccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEeCChhHHHHHHHHhcCCCceEEecCChHHHH
Q 012547 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVTHE 281 (461)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~v~~s~Di~gve 281 (461)
+. +...+++.+.+.++ ....++.||+++.+++.|.++.+.+++.+ .+.++++|+..+++++.++|+++++
T Consensus 116 ~~-----~~~~l~~~~~~~~~---~~~~~~~~P~~~~~~~~g~~~~~~~g~~~--~~~~~~ll~~~g~~~~~~~di~~~~ 185 (335)
T 1z82_A 116 IK-----TGKRVSEIVEEILG---CPYAVLSGPSHAEEVAKKLPTAVTLAGEN--SKELQKRISTEYFRVYTCEDVVGVE 185 (335)
T ss_dssp TT-----TCCCHHHHHHHHTC---CCEEEEESSCCHHHHHTTCCEEEEEEETT--HHHHHHHHCCSSEEEEEESCHHHHH
T ss_pred CC-----ccCcHHHHHHHHcC---CceEEEECCccHHHHhCCCceEEEEEehh--HHHHHHHhCCCCEEEEecCchHHHH
Confidence 86 35678888877664 34678999999999999887665554433 7889999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccC---ccchHHHHHHHHHHHHHHHHHHhCCCchhhccC-hhhhhhhhcc--ccchhHHHHHHhc
Q 012547 282 VMGGLKNVYAIGAALTNE---SATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP-LLADTYVTLL--KGRNAWYGQELAK 355 (461)
Q Consensus 282 ~~galKNv~Ai~~Gi~~g---~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g~-glgDl~~T~~--~sRN~~~G~~l~~ 355 (461)
|++++||++++++|+..+ ++|...+++..++.|+..+++++|.+++++.++ +++|++.||. .+||+++|+++.+
T Consensus 186 ~~k~l~N~~~~~~g~~~g~~~~~n~~~a~~~~~~~E~~~la~a~G~~~~~~~~l~~~~~~~~t~~s~~~~n~~~~~~~~~ 265 (335)
T 1z82_A 186 IAGALKNVIAIAAGILDGFGGWDNAKAALETRGIYEIARFGMFFGADQKTFMGLAGIGDLMVTCNSRYSRNRRFGELIAR 265 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHTSTTTHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHhCCChhhhcccccccceeeeccCccCcHHHHHHHHhC
Confidence 999999999998887653 467777889999999999999999999998886 8999999984 6999999999999
Q ss_pred CCChhhHhhhhcCCCccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhcCCCHHHHHHHHHhccc
Q 012547 356 GRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIMRESPIQAILEALRDET 435 (461)
Q Consensus 356 g~~~~~~~~~~~~~~~vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~il~~~~~~~~~~~~~l~~~~ 435 (461)
|++.+++.+. .+.++||....+.++++++++|+ + +|+++++|++++++.+|.+++..||.++.
T Consensus 266 g~~~~~~~~~--~g~~~e~~~~~~~v~~~a~~~gv--------------~-~P~~~~v~~~~~~~~~~~~~~~~l~~~~~ 328 (335)
T 1z82_A 266 GFNPLKLLES--SNQVVEGAFTVKAVMKIAKENKI--------------D-MPISEEVYRVVYEGKPPLQSMRDLMRRSL 328 (335)
T ss_dssp TCCHHHHHHT--CSSCCTHHHHHHHHHHHHHHTTC--------------C-CHHHHHHHHHHHSCCCHHHHHHHHHC---
T ss_pred CCCHHHHHHh--cCCeeeHHHHHHHHHHHHHHhCC--------------C-CcHHHHHHHHHhCCCCHHHHHHHHHcCCc
Confidence 9887665532 24568999999999999999995 6 89999999999999999999999999999
Q ss_pred CCCccc
Q 012547 436 MNDPRD 441 (461)
Q Consensus 436 ~~~~~~ 441 (461)
|.|+++
T Consensus 329 ~~~~~~ 334 (335)
T 1z82_A 329 KDEFWA 334 (335)
T ss_dssp ------
T ss_pred cccccc
Confidence 998665
No 6
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=100.00 E-value=2.3e-38 Score=323.24 Aligned_cols=321 Identities=21% Similarity=0.357 Sum_probs=266.9
Q ss_pred eEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhccCC
Q 012547 45 RIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDR 124 (461)
Q Consensus 45 kI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~~ 124 (461)
||+|||+|+||+++|..|+++ | ++|++|+|++++++.+++.+ .+..|+++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~-G-----~~V~~~~r~~~~~~~l~~~~----------------~~~~~~~~~------- 67 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKK-C-----REVCVWHMNEEEVRLVNEKR----------------ENVLFLKGV------- 67 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTT-E-----EEEEEECSCHHHHHHHHHHT----------------BCTTTSTTC-------
T ss_pred eEEEECCCHHHHHHHHHHHhC-C-----CEEEEEECCHHHHHHHHHcC----------------ccccccccc-------
Confidence 999999999999999999998 8 99999999988776533211 123333321
Q ss_pred ccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHH----HHHHhhccCCCCEEEEEeecC
Q 012547 125 TLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEE----ISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 125 ~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~----i~~~l~~~~~~~iIIs~tkGi 200 (461)
.++ .++.+++|++++++++|+||+|||++++++++++ +.+++++. +++||+++||+
T Consensus 68 ~~~------------------~~~~~~~~~~~~~~~aDvVilav~~~~~~~v~~~~~~gl~~~l~~~--~~ivv~~~~gi 127 (366)
T 1evy_A 68 QLA------------------SNITFTSDVEKAYNGAEIILFVIPTQFLRGFFEKSGGNLIAYAKEK--QVPVLVCTKGI 127 (366)
T ss_dssp BCC------------------TTEEEESCHHHHHTTCSSEEECCCHHHHHHHHHHHCHHHHHHHHHH--TCCEEECCCSC
T ss_pred ccc------------------cceeeeCCHHHHHcCCCEEEECCChHHHHHHHHHhHHHHHHhcCcc--CCEEEEECCcC
Confidence 110 1467788998888999999999999999999999 99988741 26899999999
Q ss_pred ccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEE-eCChhHHHHHHHHhcCC--CceEEecCCh
Q 012547 201 EAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARI-CGAEKWRKPLAKFLRRP--HFTVWDNGDL 277 (461)
Q Consensus 201 ~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~-~~~~~~~~~l~~ll~~~--g~~v~~s~Di 277 (461)
.+. +...+++.+.+.++. .+..++.||+++.++..+.++.+.. +.+.+..+.++++|+.. +++++.++|+
T Consensus 128 ~~~-----~~~~~~~~l~~~~~~--~~~~v~~gp~~~~~~~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~g~~~~~~~di 200 (366)
T 1evy_A 128 ERS-----TLKFPAEIIGEFLPS--PLLSVLAGPSFAIEVATGVFTCVSIASADINVARRLQRIMSTGDRSFVCWATTDT 200 (366)
T ss_dssp CTT-----TCCCHHHHHTTTSCG--GGEEEEESSCCHHHHHTTCCEEEEEECSSHHHHHHHHHHHSCTTSSEEEEEESCH
T ss_pred CCc-----cccCHHHHHHHHCCC--CcEEEEeCCChHHHHHhCCceEEEEecCCHHHHHHHHHHhcCCCCeEEEEEcCCc
Confidence 886 356677877776552 3567899999999998888776655 45667889999999999 9999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccC---ccchHHHHHHHHHHHHHHHHHHhCCCchhhccC-hhhhhhhhcc--ccchhHHHH
Q 012547 278 VTHEVMGGLKNVYAIGAALTNE---SATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP-LLADTYVTLL--KGRNAWYGQ 351 (461)
Q Consensus 278 ~gve~~galKNv~Ai~~Gi~~g---~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g~-glgDl~~T~~--~sRN~~~G~ 351 (461)
.+++|++++||++++++|+..+ +.|...+++..++.|+..+++++|.+++++.++ +++|++.+|. .+||+++|+
T Consensus 201 ~~~~~~k~~~n~~~~~~~~~~~~~~~~n~~~~~~~~~~~E~~~la~a~Gi~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 280 (366)
T 1evy_A 201 VGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEIRDLTAALGGDGSAVFGLAGLGDLQLTCSSELSRNFTVGK 280 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCCCTTTTSTTTHHHHHHHHTCTTSHHHHHHH
T ss_pred hHHHHHHHHHhHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHHHhCCCCccccccccchhheeeecCCCCchHHHHH
Confidence 9999999999999998887764 467777888999999999999999999888886 8999999884 679999999
Q ss_pred HHhcCCChhhHhhhhcCCCccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhcCCCHHHHHHHHH
Q 012547 352 ELAKGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIMRESPIQAILEAL 431 (461)
Q Consensus 352 ~l~~g~~~~~~~~~~~~~~~vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~il~~~~~~~~~~~~~l 431 (461)
++.+|++.+++... .+..+|+...++.++++++++|+ + +|+++++|++++++.+|.+++..+|
T Consensus 281 ~~~~g~~~~~~~~~--~~~~~e~~~~~~~v~~~a~~~gv--------------~-~P~~~~v~~~~~~~~~~~~~~~~l~ 343 (366)
T 1evy_A 281 KLGKGLPIEEIQRT--SKAVAEGVATADPLMRLAKQLKV--------------K-MPLCHQIYEIVYKKKNPRDALADLL 343 (366)
T ss_dssp HHHTTCCHHHHHC-----CCCHHHHHHHHHHHHHHHHTC--------------C-CHHHHHHHHHHHSCCCHHHHHHHHG
T ss_pred HHhCCCCHHHHHHH--cCCeeehHHHHHHHHHHHHHhCC--------------C-CcHHHHHHHHHHCCCCHHHHHHHHH
Confidence 99999887655422 13468999999999999999995 6 8999999999999999999999999
Q ss_pred hcccCCC
Q 012547 432 RDETMND 438 (461)
Q Consensus 432 ~~~~~~~ 438 (461)
.++.|.|
T Consensus 344 ~~~~~~~ 350 (366)
T 1evy_A 344 SCGLQDE 350 (366)
T ss_dssp GGCSCCC
T ss_pred cCCcccc
Confidence 9999888
No 7
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=100.00 E-value=4.1e-34 Score=286.83 Aligned_cols=314 Identities=22% Similarity=0.334 Sum_probs=248.9
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEec--CchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRR--PGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r--~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
|||+|||+|+||+++|..|+++ | ++|++|+| ++++++.+++++ .+..+ +.
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~-g-----~~V~~~~r~~~~~~~~~~~~~~----------------~~~~~--g~---- 52 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDN-G-----NEVRIWGTEFDTEILKSISAGR----------------EHPRL--GV---- 52 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHH-C-----CEEEEECCGGGHHHHHHHHTTC----------------CBTTT--TB----
T ss_pred CEEEEECcCHHHHHHHHHHHhC-C-----CeEEEEEccCCHHHHHHHHHhC----------------cCccc--Cc----
Confidence 6999999999999999999999 8 99999999 877665432211 00111 10
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEec--CHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeec
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVT--NLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~--dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkG 199 (461)
. ..++.+++ +++++++++|+||+|||+++++++++++.+ +++ +++||+++||
T Consensus 53 ---~-------------------~~~~~~~~~~~~~~~~~~~D~vi~~v~~~~~~~v~~~i~~-l~~---~~~vv~~~ng 106 (335)
T 1txg_A 53 ---K-------------------LNGVEIFWPEQLEKCLENAEVVLLGVSTDGVLPVMSRILP-YLK---DQYIVLISKG 106 (335)
T ss_dssp ---C-------------------CCSEEEECGGGHHHHHTTCSEEEECSCGGGHHHHHHHHTT-TCC---SCEEEECCCS
T ss_pred ---c-------------------ccceEEecHHhHHHHHhcCCEEEEcCChHHHHHHHHHHhc-CCC---CCEEEEEcCc
Confidence 0 01346666 888888999999999999999999999999 876 6899999999
Q ss_pred C---ccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEe-CChhHHHHHHHHhcCCCceEEecC
Q 012547 200 V---EAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARIC-GAEKWRKPLAKFLRRPHFTVWDNG 275 (461)
Q Consensus 200 i---~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~-~~~~~~~~l~~ll~~~g~~v~~s~ 275 (461)
+ .+. +...+++.+.+.++.. ...++++||+++.+++.+.++.++++ .+++..+.++++|+..+++++..+
T Consensus 107 ~~~~~~~-----~~~~l~~~~~~~~g~~-~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ll~~~g~~~~~~~ 180 (335)
T 1txg_A 107 LIDFDNS-----VLTVPEAVWRLKHDLR-ERTVAITGPAIAREVAKRMPTTVVFSSPSESSANKMKEIFETEYFGVEVTT 180 (335)
T ss_dssp EEEETTE-----EEEHHHHHHTTSTTCG-GGEEEEESSCCHHHHHTTCCEEEEEECSCHHHHHHHHHHHCBTTEEEEEES
T ss_pred CccCCCC-----cCccHHHHHHHhcCCC-CcEEEEECCCcHHHHHccCCcEEEEEeCCHHHHHHHHHHhCCCcEEEEecC
Confidence 9 543 2233445444433321 24678999999999888876655554 457778999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHhhccC---c-----cchHHHHHHHHHHHHHHHHHHhCCCchhhccC-hhhhhhhhccccch
Q 012547 276 DLVTHEVMGGLKNVYAIGAALTNE---S-----ATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP-LLADTYVTLLKGRN 346 (461)
Q Consensus 276 Di~gve~~galKNv~Ai~~Gi~~g---~-----~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g~-glgDl~~T~~~sRN 346 (461)
|+.+.+|+|+++|++++++|...+ + .|....++..+++|+..+++++|.+++++.++ +++|++.+|..+||
T Consensus 181 di~~~~~~k~~~N~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~E~~~la~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 260 (335)
T 1txg_A 181 DIIGTEITSALKNVYSIAIAWIRGYESRKNVEMSNAKGVIATRAINEMAELIEILGGDRETAFGLSGFGDLIATFRGGRN 260 (335)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHTSCGGGGGSTTTHHHHHHTTTCHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcchhhcccchhheeeccccCcc
Confidence 999999999999999888776543 3 56666788899999999999999999998886 89999999866899
Q ss_pred hHHHHHHhcCCChhhHhhhhcC-C-CccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhcCCCHH
Q 012547 347 AWYGQELAKGRLTLDLGDSIKG-K-GMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIMRESPI 424 (461)
Q Consensus 347 ~~~G~~l~~g~~~~~~~~~~~~-~-~~vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~il~~~~~~~ 424 (461)
+++|..++.|.+..+....+.+ + ...|+......++++++++|+ + +|+++++|++++++.+|.
T Consensus 261 ~~~~~~~~~~~s~~~d~~~~~~~~~~~~E~~~~~~~~~~~a~~~gv--------------~-~P~~~~~~~~~~~~~~~~ 325 (335)
T 1txg_A 261 GMLGELLGKGLSIDEAMEELERRGVGVVEGYKTAEKAYRLSSKINA--------------D-TKLLDSIYRVLYEGLKVE 325 (335)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHTTC--------------C-CHHHHHHHHHHHSCCCHH
T ss_pred HHHHHHHhCCCCHHHHHHHhccCCceecchHHHHHHHHHHHHHcCC--------------C-CcHHHHHHHHHhCCCCHH
Confidence 9999999888765332222110 1 468999999999999999995 7 899999999999999999
Q ss_pred HHHHHHHh
Q 012547 425 QAILEALR 432 (461)
Q Consensus 425 ~~~~~~l~ 432 (461)
+++..||.
T Consensus 326 ~~~~~l~~ 333 (335)
T 1txg_A 326 EVLFELAT 333 (335)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHc
Confidence 99998875
No 8
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=99.97 E-value=2.6e-30 Score=259.84 Aligned_cols=281 Identities=14% Similarity=0.122 Sum_probs=201.2
Q ss_pred CCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 41 ~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
..+|||+|||+|+||+++|..|+++ | ++|++| +++++++.++++++ +.. .++.
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~~-G-----~~V~l~-~~~~~~~~i~~~g~----------------~~~-~~~~--- 69 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLARA-G-----HEVILI-ARPQHVQAIEATGL----------------RLE-TQSF--- 69 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHT-T-----CEEEEE-CCHHHHHHHHHHCE----------------EEE-CSSC---
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHC-C-----CeEEEE-EcHhHHHHHHhCCe----------------EEE-cCCC---
Confidence 4568999999999999999999999 8 999999 88877776443221 111 1111
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecC
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi 200 (461)
.++ .++.+++|+++ +.++|+||+|||+++++++++++.+++.+ +++||+++||+
T Consensus 70 ----~~~------------------~~~~~~~~~~~-~~~~D~vilavk~~~~~~~l~~l~~~l~~---~~~iv~~~nGi 123 (318)
T 3hwr_A 70 ----DEQ------------------VKVSASSDPSA-VQGADLVLFCVKSTDTQSAALAMKPALAK---SALVLSLQNGV 123 (318)
T ss_dssp ----EEE------------------ECCEEESCGGG-GTTCSEEEECCCGGGHHHHHHHHTTTSCT---TCEEEEECSSS
T ss_pred ----cEE------------------EeeeeeCCHHH-cCCCCEEEEEcccccHHHHHHHHHHhcCC---CCEEEEeCCCC
Confidence 110 14667788765 68999999999999999999999999987 78999999999
Q ss_pred ccccccccccCCHHHHHHhHhCCC-----CCcEEEEeCcchhHhhhccCceEEEEeCChhHHHHHHHHhcCCCceEEecC
Q 012547 201 EAELEAVPRIITPTQMINRATGVP-----IENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNG 275 (461)
Q Consensus 201 ~~~~~~~~~~~~~se~i~~~lg~~-----~~~v~vlsGPn~a~ev~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~v~~s~ 275 (461)
+.. +.+.+.++.+ ....++++||+++.+++.+.++ ++. .+..+.++++|++.+|+++.++
T Consensus 124 ~~~-----------~~l~~~~~~~vl~g~~~~~a~~~gP~~~~~~~~g~~~---ig~-~~~~~~l~~~l~~~~~~~~~~~ 188 (318)
T 3hwr_A 124 ENA-----------DTLRSLLEQEVAAAVVYVATEMAGPGHVRHHGRGELV---IEP-TSHGANLAAIFAAAGVPVETSD 188 (318)
T ss_dssp SHH-----------HHHHHHCCSEEEEEEEEEEEEEEETTEEEEEEEEEEE---ECC-CTTTHHHHHHHHHTTCCEEECS
T ss_pred CcH-----------HHHHHHcCCcEEEEEEEEeEEEcCCeEEEEcCCceEE---EcC-CHHHHHHHHHHHhCCCCcEech
Confidence 875 3566666411 0123678999999998887533 333 4567889999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHhhccC---c---cc-hHHHHHHHHHHHHHHHHHHhCCCchhhccChhhhhhhhccccchhH
Q 012547 276 DLVTHEVMGGLKNVYAIGAALTNE---S---AT-SKSVYFAHCTSEMVFITHLLAEEPEKLAGPLLADTYVTLLKGRNAW 348 (461)
Q Consensus 276 Di~gve~~galKNv~Ai~~Gi~~g---~---~n-~~a~l~~~~~~Em~~l~~a~G~~~~t~~g~glgDl~~T~~~sRN~~ 348 (461)
|+.+.+|.++++|+.....+...+ + .+ ....++.+++.|+..++++.|.+...- +-+.+. .
T Consensus 189 Di~~~~w~Kl~~N~~~n~l~al~~~~~g~l~~~~~~~~l~~~~~~E~~~va~a~G~~l~~~----~~~~~~--------~ 256 (318)
T 3hwr_A 189 NVRGALWAKLILNCAYNALSAITQLPYGRLVRGEGVEAVMRDVMEECFAVARAEGVKLPDD----VALAIR--------R 256 (318)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSTTHHHHHHHHHHHHHHHHHHTTCCCCTT----HHHHHH--------H
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHCCCHHHHhcChhHHHHHHHHHHHHHHHHHHcCCCCChH----HHHHHH--------H
Confidence 999999999999997665544332 1 11 233689999999999999999975321 111111 1
Q ss_pred HHHHHhcCCChhhHhhhhcCCCc-cchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhc
Q 012547 349 YGQELAKGRLTLDLGDSIKGKGM-IQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIM 419 (461)
Q Consensus 349 ~G~~l~~g~~~~~~~~~~~~~~~-vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~il~~ 419 (461)
+....+..++ +..+|..++++| +|-+++ +++++++++|+ + +|+++++|++++.
T Consensus 257 ~~~~~~~~~s-SM~qD~~~gr~tEid~i~G--~vv~~a~~~gv--------------~-tP~~~~l~~ll~~ 310 (318)
T 3hwr_A 257 IAETMPRQSS-STAQDLARGKRSEIDHLNG--LIVRRGDALGI--------------P-VPANRVLHALVRL 310 (318)
T ss_dssp HHHHSTTCCC-HHHHHHHTTCCCSGGGTHH--HHHHHHHHTTC--------------C-CHHHHHHHHHHHH
T ss_pred HHHhcCCCCc-HHHHHHHcCChhHHHHHHH--HHHHHHHHhCC--------------C-CcHHHHHHHHHHH
Confidence 1111121222 222333344555 777777 99999999995 7 8999999999975
No 9
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=99.97 E-value=7.8e-30 Score=256.30 Aligned_cols=278 Identities=16% Similarity=0.192 Sum_probs=199.3
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
+|||+|||+|+||+++|..|+++ | ++|++|+|++ .+.++++++ . .+..+..
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~-g-----~~V~~~~r~~--~~~i~~~Gl-------~-------~~~~~~g------- 52 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKT-G-----HCVSVVSRSD--YETVKAKGI-------R-------IRSATLG------- 52 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHT-T-----CEEEEECSTT--HHHHHHHCE-------E-------EEETTTC-------
T ss_pred CCEEEEECcCHHHHHHHHHHHhC-C-----CeEEEEeCCh--HHHHHhCCc-------E-------EeecCCC-------
Confidence 48999999999999999999999 8 9999999986 244332211 0 0111111
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecCcc
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~~ 202 (461)
+..+ .++.+++|++++.+++|+||+|||+++++++++++.+++.+ +++||+++||+++
T Consensus 53 ~~~~-------------------~~~~~~~~~~~~~~~~DlVilavK~~~~~~~l~~l~~~l~~---~t~Iv~~~nGi~~ 110 (320)
T 3i83_A 53 DYTF-------------------RPAAVVRSAAELETKPDCTLLCIKVVEGADRVGLLRDAVAP---DTGIVLISNGIDI 110 (320)
T ss_dssp CEEE-------------------CCSCEESCGGGCSSCCSEEEECCCCCTTCCHHHHHTTSCCT---TCEEEEECSSSSC
T ss_pred cEEE-------------------eeeeeECCHHHcCCCCCEEEEecCCCChHHHHHHHHhhcCC---CCEEEEeCCCCCh
Confidence 1111 13556788877666899999999999999999999999887 7899999999987
Q ss_pred ccccccccCCHHHHHHhHhCCCCCcEEEEeCcchh-------HhhhccCceEEEEe----CChhHHHHHHHHhcCCCceE
Q 012547 203 ELEAVPRIITPTQMINRATGVPIENILYLGGPNIA-------SEIYNKEYANARIC----GAEKWRKPLAKFLRRPHFTV 271 (461)
Q Consensus 203 ~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a-------~ev~~g~~~~~~~~----~~~~~~~~l~~ll~~~g~~v 271 (461)
. +.+++.++. .+ +++||++. .++....+..+.++ .+.+..+.++++|++.+|++
T Consensus 111 ~-----------~~l~~~~~~--~~--vl~g~~~~~a~~~~pg~v~~~~~~~~~ig~~~~~~~~~~~~l~~~l~~~~~~~ 175 (320)
T 3i83_A 111 E-----------PEVAAAFPD--NE--VISGLAFIGVTRTAPGEIWHQAYGRLMLGNYPGGVSERVKTLAAAFEEAGIDG 175 (320)
T ss_dssp S-----------HHHHHHSTT--SC--EEEEEEEEEEEEEETTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHHHTTSCE
T ss_pred H-----------HHHHHHCCC--Cc--EEEEEEEeceEEcCCCEEEECCCCEEEEecCCCCccHHHHHHHHHHHhCCCCc
Confidence 6 568888863 22 45666654 33333223333343 23567899999999999999
Q ss_pred EecCChHHHHHHHHHHHH----HHHHHhhccC--ccchHHHHHHHHHHHHHHHHHHhCCCchhhccChhhhhhhhc--cc
Q 012547 272 WDNGDLVTHEVMGGLKNV----YAIGAALTNE--SATSKSVYFAHCTSEMVFITHLLAEEPEKLAGPLLADTYVTL--LK 343 (461)
Q Consensus 272 ~~s~Di~gve~~galKNv----~Ai~~Gi~~g--~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g~glgDl~~T~--~~ 343 (461)
+.++|+.+.+|+|+++|+ +++++|+.+| ..|....++++++.|+.++++++|.+... .+.|.+.++ ..
T Consensus 176 ~~~~di~~~~w~Kl~~N~~~N~ltal~~~~~g~~~~~~~~~l~~~~~~E~~~va~a~G~~l~~----~~~~~~~~~~~~~ 251 (320)
T 3i83_A 176 IATENITTARWQKCVWNAAFNPLSVLSGGLDTLDILSTQEGFVRAIMQEIRAVAAANGHPLPE----DIVEKNVASTYKM 251 (320)
T ss_dssp EECSCHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHCHHHHHHHHHHHHHHHHHTTCCCCT----THHHHHHHHHHHS
T ss_pred eECHHHHHHHHHHHHHHHhhhHHHHHHCCCHHHHHhCcHHHHHHHHHHHHHHHHHHcCCCCCh----HHHHHHHHHHhcC
Confidence 999999999999999975 6777777665 12323689999999999999999997532 234444444 24
Q ss_pred cchhH-HHHHHhcCCChhhHhhhhcCCCc-cchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhc
Q 012547 344 GRNAW-YGQELAKGRLTLDLGDSIKGKGM-IQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIM 419 (461)
Q Consensus 344 sRN~~-~G~~l~~g~~~~~~~~~~~~~~~-vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~il~~ 419 (461)
++|++ +-+++. +++++ +|.++. +++++++++|+ + +|+++++|++|+.
T Consensus 252 ~~~~sSM~qD~~------------~gr~tEid~i~G--~vv~~a~~~gv--------------~-~P~~~~l~~~l~~ 300 (320)
T 3i83_A 252 PPYKTSMLVDFE------------AGQPMETEVILG--NAVRAGRRTRV--------------A-IPHLESVYALMKL 300 (320)
T ss_dssp CCCCCHHHHHHH------------HTCCCCHHHHTH--HHHHHHHHTTC--------------C-CHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHH------------hCCCchHHHHcc--HHHHHHHHhCC--------------C-CCHHHHHHHHHHH
Confidence 45543 222232 33333 444444 99999999995 7 8999999999975
No 10
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=99.97 E-value=7.7e-30 Score=255.44 Aligned_cols=282 Identities=18% Similarity=0.160 Sum_probs=198.6
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
+|||+|||+|+||+++|..|+++ | ++|++|+|++ .+.++++++ +..+.. +
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~-g-----~~V~~~~r~~--~~~i~~~g~----------------~~~~~~------g 51 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQRS-G-----EDVHFLLRRD--YEAIAGNGL----------------KVFSIN------G 51 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHHT-S-----CCEEEECSTT--HHHHHHTCE----------------EEEETT------C
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-C-----CeEEEEEcCc--HHHHHhCCC----------------EEEcCC------C
Confidence 37999999999999999999999 8 9999999986 344322211 111110 1
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecCcc
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~~ 202 (461)
+..+ .++.+++++++ +.++|+||+|||+++++++++++++++.+ +++||+++||+++
T Consensus 52 ~~~~-------------------~~~~~~~~~~~-~~~~D~vilavk~~~~~~~l~~l~~~l~~---~~~iv~l~nGi~~ 108 (312)
T 3hn2_A 52 DFTL-------------------PHVKGYRAPEE-IGPMDLVLVGLKTFANSRYEELIRPLVEE---GTQILTLQNGLGN 108 (312)
T ss_dssp CEEE-------------------SCCCEESCHHH-HCCCSEEEECCCGGGGGGHHHHHGGGCCT---TCEEEECCSSSSH
T ss_pred eEEE-------------------eeceeecCHHH-cCCCCEEEEecCCCCcHHHHHHHHhhcCC---CCEEEEecCCCCc
Confidence 1111 13556778765 68999999999999999999999999987 7899999999986
Q ss_pred ccccccccCCHHHHHHhHhCCCCC------cEEEEeCcchhHhhhccCceEEEE-eCChhHHHHHHHHhcCCCceEEecC
Q 012547 203 ELEAVPRIITPTQMINRATGVPIE------NILYLGGPNIASEIYNKEYANARI-CGAEKWRKPLAKFLRRPHFTVWDNG 275 (461)
Q Consensus 203 ~~~~~~~~~~~se~i~~~lg~~~~------~v~vlsGPn~a~ev~~g~~~~~~~-~~~~~~~~~l~~ll~~~g~~v~~s~ 275 (461)
. +.+++.++.... ..+.+.||+++.+.+.+...+... +.+.+..+.++++|++.+|+++.++
T Consensus 109 ~-----------~~l~~~~~~~~v~~~~~~~~a~~~~p~~v~~~~~g~~~ig~~~~~~~~~~~~l~~~l~~~g~~~~~~~ 177 (312)
T 3hn2_A 109 E-----------EALATLFGAERIIGGVAFLCSNRGEPGEVHHLGAGRIILGEFLPRDTGRIEELAAMFRQAGVDCRTTD 177 (312)
T ss_dssp H-----------HHHHHHTCGGGEEEEEEEEECCBCSSSEEEECEEEEEEEEESSCCCSHHHHHHHHHHHHTTCCEEECS
T ss_pred H-----------HHHHHHCCCCcEEEEEEEeeeEEcCCcEEEECCCCeEEEecCCCCccHHHHHHHHHHHhCCCCcEECh
Confidence 5 457777763110 113467899998876553222222 1235678999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHh-hcc---C---ccchHHHHHHHHHHHHHHHHHHhC--CCchhhccChhhhhhhhc--ccc
Q 012547 276 DLVTHEVMGGLKNVYAIGAA-LTN---E---SATSKSVYFAHCTSEMVFITHLLA--EEPEKLAGPLLADTYVTL--LKG 344 (461)
Q Consensus 276 Di~gve~~galKNv~Ai~~G-i~~---g---~~n~~a~l~~~~~~Em~~l~~a~G--~~~~t~~g~glgDl~~T~--~~s 344 (461)
|+.+++|.|+++|+...+.+ +.+ | .++....++++++.|+.++++++| .+.. ..+.|.+.++ ..+
T Consensus 178 di~~~~w~Kl~~N~~~n~l~al~~~~~G~l~~~~~~~~l~~~~~~E~~~va~a~G~~~~~~----~~~~~~~~~~~~~~~ 253 (312)
T 3hn2_A 178 DLKRARWEKLVWNIPFNGLCALLQQPVNLILARDVSRKLVRGIMLEVIAGANAQGLATFIA----DGYVDDMLEFTDAMG 253 (312)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSHHHHHHHHHHHHHHHHHHHTSCCSSCCC----TTHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHCCCHHHHHhChhHHHHHHHHHHHHHHHHHHcCCccCCC----HHHHHHHHHHHhcCC
Confidence 99999999999999644433 222 2 133556899999999999999999 7543 1344555554 245
Q ss_pred chhH-HHHHHhcCCChhhHhhhhcCCCccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhcC
Q 012547 345 RNAW-YGQELAKGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIMR 420 (461)
Q Consensus 345 RN~~-~G~~l~~g~~~~~~~~~~~~~~~vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~il~~~ 420 (461)
+|++ +-+++. ++++ .|.-....+++++++++|+ + +|+++++|++|+..
T Consensus 254 ~~~sSM~qD~~------------~gr~-tEid~i~G~vv~~a~~~gv--------------~-~P~~~~l~~ll~~~ 302 (312)
T 3hn2_A 254 EYKPSMEIDRE------------EGRP-LEIAAIFRTPLAYGAREGI--------------A-MPRVEMLATLLEQA 302 (312)
T ss_dssp SCCCHHHHHHH------------TTCC-CCHHHHTHHHHHHHHHTTC--------------C-CHHHHHHHHHHHHH
T ss_pred CCCchHHHHHH------------hCCC-ccHHHHhhHHHHHHHHhCC--------------C-CCHHHHHHHHHHHH
Confidence 5653 222332 2333 3333334499999999995 7 89999999999763
No 11
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=99.96 E-value=1.8e-28 Score=247.88 Aligned_cols=289 Identities=16% Similarity=0.137 Sum_probs=201.5
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
+|||+|||+|+||+++|..|+++ | ++|++|+|+ +.++.+++.++ +.. .++.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~-g-----~~V~~~~r~-~~~~~~~~~g~----------------~~~-~~~~----- 53 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALA-G-----EAINVLARG-ATLQALQTAGL----------------RLT-EDGA----- 53 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHT-T-----CCEEEECCH-HHHHHHHHTCE----------------EEE-ETTE-----
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-C-----CEEEEEECh-HHHHHHHHCCC----------------EEe-cCCC-----
Confidence 48999999999999999999999 8 999999996 45554322211 110 0110
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecCcc
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~~ 202 (461)
.++ .++.+++|+++ +.++|+||+|||+++++++++++.+++.+ +++||+++||++.
T Consensus 54 --~~~------------------~~~~~~~~~~~-~~~~D~Vilavk~~~~~~~~~~l~~~l~~---~~~iv~~~nGi~~ 109 (335)
T 3ghy_A 54 --THT------------------LPVRATHDAAA-LGEQDVVIVAVKAPALESVAAGIAPLIGP---GTCVVVAMNGVPW 109 (335)
T ss_dssp --EEE------------------ECCEEESCHHH-HCCCSEEEECCCHHHHHHHHGGGSSSCCT---TCEEEECCSSSCT
T ss_pred --eEE------------------EeeeEECCHHH-cCCCCEEEEeCCchhHHHHHHHHHhhCCC---CCEEEEECCCCcc
Confidence 010 14667788876 58999999999999999999999999887 7899999999851
Q ss_pred cc-c--cccccC-----CHHHHHHhHhCCCCCcE--------EEEeCcchhHhhhccCceEEEE-eCChhHHHHHHHHhc
Q 012547 203 EL-E--AVPRII-----TPTQMINRATGVPIENI--------LYLGGPNIASEIYNKEYANARI-CGAEKWRKPLAKFLR 265 (461)
Q Consensus 203 ~~-~--~~~~~~-----~~se~i~~~lg~~~~~v--------~vlsGPn~a~ev~~g~~~~~~~-~~~~~~~~~l~~ll~ 265 (461)
.. . +..+.. ...+.+.+.++. .++ +.+.+|+++.+.+.+...+... +.+.+..+.++++|+
T Consensus 110 ~~~~~~g~~~~~~~~~~~~~~~l~~~~~~--~~v~~gv~~~~a~~~~pg~v~~~~~g~~~iG~~~~~~~~~~~~l~~~l~ 187 (335)
T 3ghy_A 110 WFFDRPGPLQGQRLQAVDPHGRIAQAIPT--RHVLGCVVHLTCATVSPGHIRHGNGRRLILGEPAGGASPRLASIAALFG 187 (335)
T ss_dssp TTTCSSSTTTTCCCTTTCTTSHHHHHSCG--GGEEEEEECCCEEESSTTEEEECSCCEEEEECTTCSCCHHHHHHHHHHH
T ss_pred ccccccccccccccccCCcHHHHHHhcCc--ccEEEEEEEEEEEEcCCcEEEECCCCeEEEecCCCCcCHHHHHHHHHHH
Confidence 10 0 000111 123467777763 222 5678999998876653222212 223567899999999
Q ss_pred CCCceEEecCChHHHHHHH----HHHHHHHHHHhhccC---ccchHHHHHHHHHHHHHHHHHHhCCCchhhccChhhhhh
Q 012547 266 RPHFTVWDNGDLVTHEVMG----GLKNVYAIGAALTNE---SATSKSVYFAHCTSEMVFITHLLAEEPEKLAGPLLADTY 338 (461)
Q Consensus 266 ~~g~~v~~s~Di~gve~~g----alKNv~Ai~~Gi~~g---~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g~glgDl~ 338 (461)
+.+|+++.++|+.+..|.+ +.+|++++++|+.+| .++....+++++++|+.++++++|.++.... +..
T Consensus 188 ~~g~~~~~~~di~~~~w~Kl~~na~~N~l~al~~~~~g~~~~~~~~~~l~~~~~~E~~~va~a~G~~~~~~~-----~~~ 262 (335)
T 3ghy_A 188 RAGLQAECSEAIQRDIWFKLWGNMTMNPVSVLTGATCDRILDDPLVSAFCLAVMAEAKAIGARIGCPIEQSG-----EAR 262 (335)
T ss_dssp HTTCEEEECSCHHHHHHHHHHTTTTHHHHHHHHCCCHHHHHHSHHHHHHHHHHHHHHHHHHHTTTCCCCSCH-----HHH
T ss_pred hCCCCcEeCchHHHHHHHHHHHHhhhhHHHHHhCCChHHHhcChHHHHHHHHHHHHHHHHHHHcCCCCCccH-----HHH
Confidence 9999999999999998765 568999999998876 3556678999999999999999999764321 212
Q ss_pred hhc--cccchhHHHHHHhcCCChhhHhhhhcCC-Cc-cchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHH
Q 012547 339 VTL--LKGRNAWYGQELAKGRLTLDLGDSIKGK-GM-IQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLY 414 (461)
Q Consensus 339 ~T~--~~sRN~~~G~~l~~g~~~~~~~~~~~~~-~~-vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly 414 (461)
.++ ..++|+ + +..+|..+++ ++ +|-++. +++++++++|+ + +|+++++|
T Consensus 263 ~~~~~~~~~~~----------s-SM~qD~~~gr~~tEid~i~G--~vv~~a~~~gv--------------~-~P~~~~l~ 314 (335)
T 3ghy_A 263 SAVTRQLGAFK----------T-SMLQDAEAGRGPLEIDALVA--SVREIGLHVGV--------------P-TPQIDTLL 314 (335)
T ss_dssp HHHHHTTCSCC----------C-TTTC-----CCCCCHHHHTH--HHHHHHHHHTC--------------C-CHHHHHHH
T ss_pred HHHHhccCCCC----------c-HHHHHHHcCCCCchHHHHhh--HHHHHHHHhCC--------------C-CCHHHHHH
Confidence 111 123333 2 1122222344 33 455544 99999999995 7 89999999
Q ss_pred HHHhc
Q 012547 415 KILIM 419 (461)
Q Consensus 415 ~il~~ 419 (461)
++++.
T Consensus 315 ~li~~ 319 (335)
T 3ghy_A 315 GLVRL 319 (335)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99975
No 12
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=99.95 E-value=1.7e-27 Score=236.60 Aligned_cols=271 Identities=13% Similarity=0.105 Sum_probs=188.6
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
+|||+|||+|+||+++|..|+++ | ++|++|+|+++.++.. .. + +
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~-g-----~~V~~~~r~~~~~~~~---------~~----------~-----g------ 45 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQS-L-----PHTTLIGRHAKTITYY---------TV----------P-----H------ 45 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHH-C-----TTCEEEESSCEEEEEE---------SS----------T-----T------
T ss_pred CcEEEEECCCHHHHHHHHHHHHC-C-----CeEEEEEeccCcEEEE---------ec----------C-----C------
Confidence 47999999999999999999999 8 8999999997544310 00 0 0
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHh-cCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecCc
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAV-WDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av-~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~ 201 (461)
.+ +..++.+..+++ .++|+||+|||+++++++++++.+++.+ +++||+++||++
T Consensus 46 --~~--------------------~~~~~~~~~~~~~~~~D~vilavk~~~~~~~l~~l~~~l~~---~~~iv~~~nGi~ 100 (294)
T 3g17_A 46 --AP--------------------AQDIVVKGYEDVTNTFDVIIIAVKTHQLDAVIPHLTYLAHE---DTLIILAQNGYG 100 (294)
T ss_dssp --SC--------------------CEEEEEEEGGGCCSCEEEEEECSCGGGHHHHGGGHHHHEEE---EEEEEECCSSCC
T ss_pred --ee--------------------ccceecCchHhcCCCCCEEEEeCCccCHHHHHHHHHHhhCC---CCEEEEeccCcc
Confidence 00 112223344444 7899999999999999999999999987 689999999999
Q ss_pred cccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEeCChhHHHHHHHHhcCCCceEEecCChHHHH
Q 012547 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVTHE 281 (461)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~v~~s~Di~gve 281 (461)
... . .+. .+.++......+.+.||+++. .. +..+.. ++.+..+.++++|++.+|+++.++|+.+.+
T Consensus 101 ~~~-----~-~~~---~~v~~g~~~~~a~~~~pg~v~-~~---~~~~~~-~~~~~~~~l~~~l~~~~~~~~~~~di~~~~ 166 (294)
T 3g17_A 101 QLE-----H-IPF---KNVCQAVVYISGQKKGDVVTH-FR---DYQLRI-QDNALTRQFRDLVQDSQIDIVLEANIQQAI 166 (294)
T ss_dssp CGG-----G-CCC---SCEEECEEEEEEEEETTEEEE-EE---EEEEEE-ECSHHHHHHHHHTTTSSCEEEEESSHHHHH
T ss_pred cHh-----h-CCC---CcEEEEEEEEEEEEcCCCEEE-EC---CCEEec-CccHHHHHHHHHHHhCCCceEEChHHHHHH
Confidence 862 0 000 011110001235688999873 22 222223 345678999999999999999999999999
Q ss_pred HHHHHHHH-HH--HHHhhccC---ccchHHHHHHHHHHHHHHHHHHhCCCchhhccChhhhhhhh-c-cccchhHHHHHH
Q 012547 282 VMGGLKNV-YA--IGAALTNE---SATSKSVYFAHCTSEMVFITHLLAEEPEKLAGPLLADTYVT-L-LKGRNAWYGQEL 353 (461)
Q Consensus 282 ~~galKNv-~A--i~~Gi~~g---~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g~glgDl~~T-~-~~sRN~~~G~~l 353 (461)
|.|+++|+ ++ .+.|...| .++....++++++.|+.+++++.|.+...- .+.+.+.. + ..+.|+
T Consensus 167 w~Kl~~N~~inl~al~~~~~g~~l~~~~~~~l~~~~~~E~~~va~a~G~~l~~~---~~~~~~~~~~~~~~~~~------ 237 (294)
T 3g17_A 167 WYKLLVNLGINSITALGRQTVAIMHNPEIRILCRQLLLDGCRVAQAEGLNFSEQ---TVDTIMTIYQGYPDEMG------ 237 (294)
T ss_dssp HHHHHHHHHHHHHHHHHTSCGGGGGSHHHHHHHHHHHHHHHHHHHHTTCCCCHH---HHHHHHHHHHTSCTTCC------
T ss_pred HHHHHHHHHHHHHHHHCCChHHHHcCHHHHHHHHHHHHHHHHHHHHcCCCCCHH---HHHHHHHHHhhcCCCCC------
Confidence 99999999 34 33344333 245566899999999999999999975321 12222222 1 123333
Q ss_pred hcCCChhhHhhhhcCCCc-cchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhc
Q 012547 354 AKGRLTLDLGDSIKGKGM-IQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIM 419 (461)
Q Consensus 354 ~~g~~~~~~~~~~~~~~~-vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~il~~ 419 (461)
++..+|..++++| +|.+++ +++++++++|+ + +|+++++|++++.
T Consensus 238 -----sSM~qD~~~gr~tEid~i~G--~vv~~a~~~gv--------------~-~P~~~~l~~ll~~ 282 (294)
T 3g17_A 238 -----TSMYYDIVHQQPLEVEAIQG--FIYRRAREHNL--------------D-TPYLDTIYSFLRA 282 (294)
T ss_dssp -----CHHHHHHHTTCCCSGGGTHH--HHHHHHHHTTC--------------C-CHHHHHHHHHHHH
T ss_pred -----CcHHHHHHcCCCccHHHhhh--HHHHHHHHhCC--------------C-CChHHHHHHHHHH
Confidence 1122333344455 788877 99999999995 7 8999999999975
No 13
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.95 E-value=2.5e-26 Score=227.33 Aligned_cols=282 Identities=16% Similarity=0.147 Sum_probs=202.0
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
+|||+|||+|+||+++|..|+++ | ++|++|+|++++++.++++++ +..+.++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~-g-----~~V~~~~r~~~~~~~~~~~g~----------------~~~~~~~------ 54 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQG-G-----NDVTLIDQWPAHIEAIRKNGL----------------IADFNGE------ 54 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHHHCE----------------EEEETTE------
T ss_pred CCeEEEECcCHHHHHHHHHHHhC-C-----CcEEEEECCHHHHHHHHhCCE----------------EEEeCCC------
Confidence 48999999999999999999999 8 999999999887765332210 0011100
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecC--HHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecC
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTN--LQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~d--l~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi 200 (461)
.++ .++.++++ ..++++++|+||+|||++.++++++++.+++++ +++||+++||+
T Consensus 55 --~~~------------------~~~~~~~~~~~~~~~~~~d~vi~~v~~~~~~~v~~~l~~~l~~---~~~iv~~~~g~ 111 (316)
T 2ew2_A 55 --EVV------------------ANLPIFSPEEIDHQNEQVDLIIALTKAQQLDAMFKAIQPMITE---KTYVLCLLNGL 111 (316)
T ss_dssp --EEE------------------ECCCEECGGGCCTTSCCCSEEEECSCHHHHHHHHHHHGGGCCT---TCEEEECCSSS
T ss_pred --eeE------------------ecceeecchhhcccCCCCCEEEEEeccccHHHHHHHHHHhcCC---CCEEEEecCCC
Confidence 000 02333332 222334899999999999999999999999886 78999999998
Q ss_pred ccccccccccCCHHHHHHhHhCCCCCcE--------EEEeCcchhHhhhccCceEEEE-eCChhHHHHHHHHhcCCCceE
Q 012547 201 EAELEAVPRIITPTQMINRATGVPIENI--------LYLGGPNIASEIYNKEYANARI-CGAEKWRKPLAKFLRRPHFTV 271 (461)
Q Consensus 201 ~~~~~~~~~~~~~se~i~~~lg~~~~~v--------~vlsGPn~a~ev~~g~~~~~~~-~~~~~~~~~l~~ll~~~g~~v 271 (461)
... +.+.+.++. .++ +.+.||+++.+...|.+..+.. +.+++..+.++++|+..|+++
T Consensus 112 ~~~-----------~~l~~~~~~--~~vi~g~~~~~~~~~~p~~~~~~~~g~~~i~~~~~~~~~~~~~~~~ll~~~g~~~ 178 (316)
T 2ew2_A 112 GHE-----------DVLEKYVPK--ENILVGITMWTAGLEGPGRVKLLGDGEIELENIDPSGKKFALEVVDVFQKAGLNP 178 (316)
T ss_dssp CTH-----------HHHTTTSCG--GGEEEEEECCCCEEEETTEEEECSCCCEEEEESSGGGHHHHHHHHHHHHHTTCCE
T ss_pred CcH-----------HHHHHHcCC--ccEEEEEeeeeeEEcCCCEEEEecCCcEEEeecCCCccHHHHHHHHHHHhCCCCc
Confidence 753 345555542 111 2478999888777776554333 345677899999999999999
Q ss_pred EecCChHHHHHHHHHHHHHHHHHhhccC------ccchHH-HHHHHHHHHHHHHHHHhCCCchhhccChhhhhhhhcc--
Q 012547 272 WDNGDLVTHEVMGGLKNVYAIGAALTNE------SATSKS-VYFAHCTSEMVFITHLLAEEPEKLAGPLLADTYVTLL-- 342 (461)
Q Consensus 272 ~~s~Di~gve~~galKNv~Ai~~Gi~~g------~~n~~a-~l~~~~~~Em~~l~~a~G~~~~t~~g~glgDl~~T~~-- 342 (461)
+..+|+.+.+|.++++|++..+.+...+ ..|..+ .++..++.|+..+++++|.++.. ..+.|++.+|.
T Consensus 179 ~~~~d~~~~~~~Kl~~N~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~E~~~la~~~G~~~~~---~~~~~~~~~~~~~ 255 (316)
T 2ew2_A 179 SYSSNVRYSIWRKACVNGTLNGLCTILDCNIAEFGALPVSESLVKTLISEFAAVAEKEAIYLDQ---AEVYTHIVQTYDP 255 (316)
T ss_dssp EECTTHHHHHHHHHHHHTTHHHHHHHHTCCHHHHHTSTTHHHHHHHHHHHHHHHHHHTTCCCCH---HHHHHHHHHTTCT
T ss_pred EEchhHHHHHHHHHHHhhhHHHHHHHhCCcHHHHHhCHHHHHHHHHHHHHHHHHHHHcCCCCCh---HHHHHHHHHHhcc
Confidence 9999999999999999986544332221 134333 67889999999999999998621 14678777763
Q ss_pred c--cchhH-HHHHH-hcCCChhhHhhhhcCCCccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHh
Q 012547 343 K--GRNAW-YGQEL-AKGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILI 418 (461)
Q Consensus 343 ~--sRN~~-~G~~l-~~g~~~~~~~~~~~~~~~vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~il~ 418 (461)
. ++|+. +.+++ .+|+ ..|.......++++++++|+ + +|+++++|++++
T Consensus 256 ~~~~~~~~sm~~d~~~~g~-------------~~E~~~~~~~~~~~a~~~gv--------------~-~P~~~~~~~~~~ 307 (316)
T 2ew2_A 256 NGIGLHYPSMYQDLIKNHR-------------LTEIDYINGAVWRKGQKYNV--------------A-TPFCAMLTQLVH 307 (316)
T ss_dssp TTTTTSCCHHHHHHTTTCC-------------CCSGGGTHHHHHHHHHHHTC--------------C-CHHHHHHHHHHH
T ss_pred ccCCCCCcHHHHHHHHcCC-------------cchHHHHhhHHHHHHHHhCC--------------C-CCHHHHHHHHHH
Confidence 3 67765 55555 4444 23455566789999999995 7 899999999997
Q ss_pred c
Q 012547 419 M 419 (461)
Q Consensus 419 ~ 419 (461)
.
T Consensus 308 ~ 308 (316)
T 2ew2_A 308 G 308 (316)
T ss_dssp H
T ss_pred H
Confidence 5
No 14
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=99.92 E-value=2.3e-24 Score=215.63 Aligned_cols=278 Identities=16% Similarity=0.080 Sum_probs=185.9
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
+|||+|||+|+||+++|..|+ + | ++|++|+|+++++++++++++ +.. .++.
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~-g-----~~V~~~~r~~~~~~~l~~~G~----------------~~~-~~~~----- 52 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-L-Y-----HDVTVVTRRQEQAAAIQSEGI----------------RLY-KGGE----- 52 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T-T-----SEEEEECSCHHHHHHHHHHCE----------------EEE-ETTE-----
T ss_pred CCEEEEECCCHHHHHHHHHHh-c-C-----CceEEEECCHHHHHHHHhCCc----------------eEe-cCCC-----
Confidence 489999999999999999999 8 8 999999999877665433221 000 0000
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecCcc
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~~ 202 (461)
..+ ..+..+. ++..++|+||+|||+++++++++++.++ .+ ++ ||+++||++.
T Consensus 53 --~~~------------------~~~~~~~---~~~~~~D~vilavK~~~~~~~l~~l~~~-~~---~~-ivs~~nGi~~ 104 (307)
T 3ego_A 53 --EFR------------------ADCSADT---SINSDFDLLVVTVKQHQLQSVFSSLERI-GK---TN-ILFLQNGMGH 104 (307)
T ss_dssp --EEE------------------ECCEEES---SCCSCCSEEEECCCGGGHHHHHHHTTSS-CC---CE-EEECCSSSHH
T ss_pred --eec------------------ccccccc---cccCCCCEEEEEeCHHHHHHHHHHhhcC-CC---Ce-EEEecCCccH
Confidence 000 0122222 2457899999999999999999999875 43 56 9999999987
Q ss_pred ccccccccCCHHHHHHhHhCCCC------CcEEEEeCcchhHhhhccCceEEEEeCChhHHHHHHHHhcCCCceEEecCC
Q 012547 203 ELEAVPRIITPTQMINRATGVPI------ENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGD 276 (461)
Q Consensus 203 ~~~~~~~~~~~se~i~~~lg~~~------~~v~vlsGPn~a~ev~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~v~~s~D 276 (461)
. +.+++.++... ...+.+.+|+...+.+.+...+....+..+..+.+.++|...++++..++|
T Consensus 105 ~-----------e~l~~~~~~~~vl~g~~~~~a~~~~pg~v~~~~~g~~~iG~~~~~~~~~~~l~~~l~~ag~~~~~~~d 173 (307)
T 3ego_A 105 I-----------HDLKDWHVGHSIYVGIVEHGAVRKSDTAVDHTGLGAIKWSAFDDAEPDRLNILFQHNHSDFPIYYETD 173 (307)
T ss_dssp H-----------HHHHTCCCSCEEEEEEECCEEEECSSSEEEEEECCCEEEEECTTCCGGGGTTTTSSCCTTSCEEECSC
T ss_pred H-----------HHHHHhCCCCcEEEEEEeeceEECCCCEEEEeeeeeEEEEeCCCCcHHHHHHHHHhhhCCCCcEechh
Confidence 5 56777766321 112456788888776666543333323345667788899999999999999
Q ss_pred hHHHHHHHHHHHHH-HHHHhhcc---C--ccc-hHHHHHHHHHHHHHHHHHHhCCCchhhccChhhhhhhhccccchhHH
Q 012547 277 LVTHEVMGGLKNVY-AIGAALTN---E--SAT-SKSVYFAHCTSEMVFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWY 349 (461)
Q Consensus 277 i~gve~~galKNv~-Ai~~Gi~~---g--~~n-~~a~l~~~~~~Em~~l~~a~G~~~~t~~g~glgDl~~T~~~sRN~~~ 349 (461)
+.+..|.+++.|+. .-.+.+.+ | ..+ ....++...+.|+..++++.+ ++.+ +..+...+
T Consensus 174 i~~~~W~Kl~~N~~~N~ltal~~~~~g~l~~~~~~~~l~~~l~~E~~~va~~~~--~~~~----~~~~~~~~-------- 239 (307)
T 3ego_A 174 WYRLLTGKLIVNACINPLTALLQVKNGELLTTPAYLAFMKLVFQEACRILKLEN--EEKA----WERVQAVC-------- 239 (307)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHSHHHHHHHHHHHHHHHHHHTCSC--HHHH----HHHHHHHH--------
T ss_pred HHHHHHHHHHHhhhhhHHHHHhcCCcchhhcChhHHHHHHHHHHHHHHHHhccC--hHHH----HHHHHHHH--------
Confidence 99999999999983 33333332 3 112 223678899999999986431 2211 11111111
Q ss_pred HHHHhcCCChhhHhhhhcCCCc-cchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhcCC
Q 012547 350 GQELAKGRLTLDLGDSIKGKGM-IQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIMRE 421 (461)
Q Consensus 350 G~~l~~g~~~~~~~~~~~~~~~-vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~il~~~~ 421 (461)
......++ +..+|..++++| +|-+++ +++++++++|+ + +|+++++|++++.-+
T Consensus 240 -~~~~~~~s-SM~qD~~~gr~tEid~i~G--~vv~~a~~~gv--------------~-tP~~~~l~~li~~~e 293 (307)
T 3ego_A 240 -GQTKENRS-SMLVDVIGGRQTEADAIIG--YLLKEASLQGL--------------D-AVHLEFLYGSIKALE 293 (307)
T ss_dssp -HHTTTCCC-HHHHHHHHTCCCSHHHHHH--HHHHHHHHTTC--------------C-CHHHHHHHHHHHHTC
T ss_pred -HhcCCCCc-hHHHHHHcCCcccHHHhhh--HHHHHHHHcCC--------------C-CcHHHHHHHHHHHHH
Confidence 11111222 233333345555 778777 99999999995 7 899999999998644
No 15
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.92 E-value=2.7e-24 Score=213.56 Aligned_cols=286 Identities=14% Similarity=0.097 Sum_probs=187.0
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCC-eeEEEEecCchhhhhhhh-hhHHHHHhhhhhhHHhhhhcccccchhhh
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDK-VLIRIWRRPGRSVDRATA-EHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~-~~V~l~~r~~~~~~~~~~-~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (461)
.+|||+|||+|+||+++|..|+++ +....+ ++|++|+| +++++.+++ .++ +.....+
T Consensus 7 ~~m~I~iiG~G~mG~~~a~~L~~~-~~~~~g~~~V~~~~r-~~~~~~l~~~~g~----------------~~~~~~~--- 65 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGGYYGAMLALR-AAATDGLLEVSWIAR-GAHLEAIRAAGGL----------------RVVTPSR--- 65 (317)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHH-HHHTTSSEEEEEECC-HHHHHHHHHHTSE----------------EEECSSC---
T ss_pred CCCEEEEECcCHHHHHHHHHHHhC-ccccCCCCCEEEEEc-HHHHHHHHhcCCe----------------EEEeCCC---
Confidence 458999999999999999999876 100002 78999999 666655332 110 0000000
Q ss_pred hccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeec
Q 012547 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (461)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkG 199 (461)
+ ... .++.++++.+ ++.++|+||+|||+++++++++++.+++.+ +++||+++||
T Consensus 66 ---~-~~~------------------~~~~~~~~~~-~~~~~D~vil~vk~~~~~~v~~~i~~~l~~---~~~iv~~~nG 119 (317)
T 2qyt_A 66 ---D-FLA------------------RPTCVTDNPA-EVGTVDYILFCTKDYDMERGVAEIRPMIGQ---NTKILPLLNG 119 (317)
T ss_dssp ---E-EEE------------------CCSEEESCHH-HHCCEEEEEECCSSSCHHHHHHHHGGGEEE---EEEEEECSCS
T ss_pred ---C-eEE------------------ecceEecCcc-ccCCCCEEEEecCcccHHHHHHHHHhhcCC---CCEEEEccCC
Confidence 0 000 1345666665 478999999999999999999999998886 6889999999
Q ss_pred CccccccccccCCHHHHHHhHhCCCC------CcEEEEeCcchhHhhhccCceEEEEeC-----ChhHHHHHHHHhcCCC
Q 012547 200 VEAELEAVPRIITPTQMINRATGVPI------ENILYLGGPNIASEIYNKEYANARICG-----AEKWRKPLAKFLRRPH 268 (461)
Q Consensus 200 i~~~~~~~~~~~~~se~i~~~lg~~~------~~v~vlsGPn~a~ev~~g~~~~~~~~~-----~~~~~~~l~~ll~~~g 268 (461)
+... +.+++.++... .-.+.++||+.+.+...+. ..+++. +.+.. .++++|+..|
T Consensus 120 ~~~~-----------~~l~~~l~~~~v~~g~~~~~a~~~~pg~~~~~~~g~--~~~ig~~~~~~~~~~~-~~~~ll~~~g 185 (317)
T 2qyt_A 120 ADIA-----------ERMRTYLPDTVVWKGCVYISARKSAPGLITLEADRE--LFYFGSGLPEQTDDEV-RLAELLTAAG 185 (317)
T ss_dssp SSHH-----------HHHTTTSCTTTBCEEEEEEEEEEEETTEEEEEEEEE--EEEEECCSSSCCHHHH-HHHHHHHHTT
T ss_pred CCcH-----------HHHHHHCCCCcEEEEEEEEEEEEcCCCEEEEcCCCc--eEEEcCCCCCCcCHHH-HHHHHHHHCC
Confidence 8653 45666665311 0124567787766555442 221322 24556 8999999999
Q ss_pred ceEEecCChHHHHHHHHHHHHHHHHHhhccCccch-----HHHHHHHHHHHHHHHHHHhCCCchhhccChhhhhhhhcc-
Q 012547 269 FTVWDNGDLVTHEVMGGLKNVYAIGAALTNESATS-----KSVYFAHCTSEMVFITHLLAEEPEKLAGPLLADTYVTLL- 342 (461)
Q Consensus 269 ~~v~~s~Di~gve~~galKNv~Ai~~Gi~~g~~n~-----~a~l~~~~~~Em~~l~~a~G~~~~t~~g~glgDl~~T~~- 342 (461)
++++..+|+.+.+|.++++|++..+.+...+..+. ...++.+++.|+..+++++|.++++. .+.|++.+|.
T Consensus 186 ~~~~~~~di~~~~~~Kl~~N~~~~~~~al~g~~~g~~~~~~~~~~~~~~~E~~~v~~a~G~~~~~~---~~~~~~~~~~~ 262 (317)
T 2qyt_A 186 IRAYNPTDIDWYIMKKFMMISVTATATAYFDKPIGSILTEHEPELLSLLEEVAELFRAKYGQVPDD---VVQQLLDKQRK 262 (317)
T ss_dssp CCEECCSCHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHCHHHHHHHHHHHHHHHHHHTSCCCSS---HHHHHHHHHHH
T ss_pred CCCEEchHHHHHHHHHHHHHHhhHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChH---HHHHHHHHHhc
Confidence 99999999999999999999875554433332111 23577889999999999999986432 4567776652
Q ss_pred -ccchhH-HHHHHhcCCChhhHhhhhcCCCccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhc
Q 012547 343 -KGRNAW-YGQELAKGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIM 419 (461)
Q Consensus 343 -~sRN~~-~G~~l~~g~~~~~~~~~~~~~~~vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~il~~ 419 (461)
.++|+. +.+++.+|+. .|.......++++++++|+ + +|+++.+|++++.
T Consensus 263 ~~~~~~~sm~~d~~~g~~-------------~E~~~~~g~~~~~a~~~gv--------------~-~P~~~~~~~~~~~ 313 (317)
T 2qyt_A 263 MPPESTSSMHSDFLQGGS-------------TEVETLTGYVVREAEALRV--------------D-LPMYKRMYRELVS 313 (317)
T ss_dssp C---------------------------------CTTTHHHHHHHHHTTC--------------C-CHHHHHHHHTTCC
T ss_pred cCCCCCChHHHHHHcCCc-------------cCHHHHhhHHHHHHHHcCC--------------C-CCHHHHHHHHHHH
Confidence 466664 3334433332 2222335589999999995 7 8999999999875
No 16
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.91 E-value=3.2e-23 Score=202.84 Aligned_cols=276 Identities=11% Similarity=0.091 Sum_probs=188.9
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhccC
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (461)
|||+|||+|+||+++|..|+++ | ++|++|+|++++++.++..+ ..+ .
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~-g-----~~V~~~~r~~~~~~~l~~~~---------------------~~~------~ 47 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQ-G-----HEVQGWLRVPQPYCSVNLVE---------------------TDG------S 47 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCSEEEEEEEC---------------------TTS------C
T ss_pred CeEEEECcCHHHHHHHHHHHhC-C-----CCEEEEEcCccceeeEEEEc---------------------CCC------c
Confidence 7999999999999999999999 8 99999999987554321100 000 0
Q ss_pred CccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecCccc
Q 012547 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEAE 203 (461)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~~~ 203 (461)
.++ ..+. .++. ++++++|+||+|||+++++++++++.+++++ +++||+++||+...
T Consensus 48 -~~~------------------~~~~-~~~~-~~~~~~d~vi~~v~~~~~~~v~~~l~~~l~~---~~~vv~~~~g~~~~ 103 (291)
T 1ks9_A 48 -IFN------------------ESLT-ANDP-DFLATSDLLLVTLKAWQVSDAVKSLASTLPV---TTPILLIHNGMGTI 103 (291)
T ss_dssp -EEE------------------EEEE-ESCH-HHHHTCSEEEECSCGGGHHHHHHHHHTTSCT---TSCEEEECSSSCTT
T ss_pred -eee------------------eeee-ecCc-cccCCCCEEEEEecHHhHHHHHHHHHhhCCC---CCEEEEecCCCCcH
Confidence 000 0122 2444 5678999999999999999999999998876 68899999999654
Q ss_pred cccccccCCHHHHHHhHhCC--C--CCcEEEEeCcchhHhhhccCceEEEEeCChhHHHHHHHHhcCCCceEEecCChHH
Q 012547 204 LEAVPRIITPTQMINRATGV--P--IENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVT 279 (461)
Q Consensus 204 ~~~~~~~~~~se~i~~~lg~--~--~~~v~vlsGPn~a~ev~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~v~~s~Di~g 279 (461)
+.+.+.++. . ....+.+.|| .+.+...|...+...+++++..+.++++|+..|++++..+|+.+
T Consensus 104 -----------~~l~~~~~~~~~g~~~~~~~~~~p-~~~~~~~g~~~i~~~~~~~~~~~~~~~ll~~~g~~~~~~~~~~~ 171 (291)
T 1ks9_A 104 -----------EELQNIQQPLLMGTTTHAARRDGN-VIIHVANGITHIGPARQQDGDYSYLADILQTVLPDVAWHNNIRA 171 (291)
T ss_dssp -----------GGGTTCCSCEEEEEECCEEEEETT-EEEEEECCCEEEEESSGGGTTCTHHHHHHHTTSSCEEECTTHHH
T ss_pred -----------HHHHHhcCCeEEEEEeEccEEcCC-EEEEecccceEEccCCCCcchHHHHHHHHHhcCCCCeecHHHHH
Confidence 123343331 0 0113468899 66666666533222233456678899999999999999999999
Q ss_pred HHHHHHHHHHH-HHHHhhc---cCc-cchHHHHHHHHHHHHHHHHHHhCCCchhhcc--ChhhhhhhhccccchhHHHHH
Q 012547 280 HEVMGGLKNVY-AIGAALT---NES-ATSKSVYFAHCTSEMVFITHLLAEEPEKLAG--PLLADTYVTLLKGRNAWYGQE 352 (461)
Q Consensus 280 ve~~galKNv~-Ai~~Gi~---~g~-~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g--~glgDl~~T~~~sRN~~~G~~ 352 (461)
..|.+++.|.. ...+++. ++. .+ ...++..++.|+..+++++|.++. ... ..+.|++.+|...+.+.+ ++
T Consensus 172 ~~~~Kl~~n~~~n~~tal~~~~~g~~~~-~~~~~~~~~~E~~~va~a~G~~~~-~~~~~~~~~~~~~~~~~~~ssm~-~d 248 (291)
T 1ks9_A 172 ELWRKLAVNCVINPLTAIWNCPNGELRH-HPQEIMQICEEVAAVIEREGHHTS-AEDLRDYVMQVIDATAENISSML-QD 248 (291)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGGGG-CHHHHHHHHHHHHHHHHHHTCCCC-HHHHHHHHHHHHHHTTTCCCHHH-HH
T ss_pred HHHHHHeeeeeecHHHHHHCCCchHHHh-HHHHHHHHHHHHHHHHHHcCCCCC-HHHHHHHHHHHHhcCCCCCChHH-HH
Confidence 99988877763 2223333 221 11 236788999999999999999752 112 156777776643333333 56
Q ss_pred HhcCCChhhHhhhhcCCCccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhc
Q 012547 353 LAKGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIM 419 (461)
Q Consensus 353 l~~g~~~~~~~~~~~~~~~vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~il~~ 419 (461)
+.+|+.. ++. .+.| .++++++++|+ + +|+++++|+++..
T Consensus 249 ~~~g~~~-e~~-------~~~g-----~~~~~a~~~gv--------------~-~P~~~~~~~~~~~ 287 (291)
T 1ks9_A 249 IRALRHT-EID-------YING-----FLLRRARAHGI--------------A-VPENTRLFEMVKR 287 (291)
T ss_dssp HHTTCCC-SGG-------GTHH-----HHHHHHHHHTC--------------C-CHHHHHHHHHHHH
T ss_pred HHcCCcc-HHH-------HHHH-----HHHHHHHHhCC--------------C-CCHHHHHHHHHHH
Confidence 6666653 111 2344 69999999995 7 8999999999863
No 17
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=99.90 E-value=1.9e-23 Score=215.72 Aligned_cols=296 Identities=10% Similarity=0.134 Sum_probs=188.2
Q ss_pred CceEEEECccHHHHHHHHHHHH-hcCCCCCCeeEEEEe---cCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhh
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQD-SYGYLRDKVLIRIWR---RPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~-~~G~~~~~~~V~l~~---r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~ 118 (461)
+|||+|||+|+||+++|..|++ + | ++|++|+ |++++++. .+++++. ..+..+.++.
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~-G-----~~V~~~~~~~r~~~~~~~--------~~~~~g~-----~~~~~~~~~~- 61 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRD-G-----VEVRVLTLFADEAERWTK--------ALGADEL-----TVIVNEKDGT- 61 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTST-T-----EEEEEECCSTTHHHHHHH--------HHTTSCE-----EEEEECSSSC-
T ss_pred CceEEEECCCHHHHHHHHHHHhCC-C-----CEEEEEeCCCCcHHHHHH--------HHhhccc-----eeeeecCCCc-
Confidence 4899999999999999999987 6 7 9999999 66655443 1221110 0010111110
Q ss_pred hhccCCccchhhhhhhcccccCCCCCCCCeE-EecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEE-
Q 012547 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLK-VVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISL- 196 (461)
Q Consensus 119 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~-~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~- 196 (461)
...++ ..+. +++|++++++++|+||+|||++.++++++++.+++.+ +++|+++
T Consensus 62 ----~~~~~------------------~~~~~~~~~~~~a~~~aD~Vilav~~~~~~~v~~~l~~~l~~---~~ivv~~~ 116 (404)
T 3c7a_A 62 ----QTEVK------------------SRPKVITKDPEIAISGADVVILTVPAFAHEGYFQAMAPYVQD---SALIVGLP 116 (404)
T ss_dssp ----EEEEE------------------ECCSEEESCHHHHHTTCSEEEECSCGGGHHHHHHHHTTTCCT---TCEEEETT
T ss_pred ----cceee------------------ccceEEeCCHHHHhCCCCEEEEeCchHHHHHHHHHHHhhCCC---CcEEEEcC
Confidence 00000 0233 7789988899999999999999999999999999887 6888884
Q ss_pred -eecCccccccccccCCHHHHHHhH-----h-CCCCCc-EEEEeCcchhHhhhccCce--EEEE-e--C-ChhHHHHHHH
Q 012547 197 -AKGVEAELEAVPRIITPTQMINRA-----T-GVPIEN-ILYLGGPNIASEIYNKEYA--NARI-C--G-AEKWRKPLAK 262 (461)
Q Consensus 197 -tkGi~~~~~~~~~~~~~se~i~~~-----l-g~~~~~-v~vlsGPn~a~ev~~g~~~--~~~~-~--~-~~~~~~~l~~ 262 (461)
++|++... .+.+.+. + +....+ .+.+.||+++.++..+... .... + . .++..+.+++
T Consensus 117 ~~~G~~~~~---------~~~l~~~~~~~v~~~~~~~~~~~~~~gpg~~v~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~ 187 (404)
T 3c7a_A 117 SQAGFEFQC---------RDILGDKAAAVSMMSFETLPWACRIKEFGRKVEVLGTKSVLAASLIKGTAKTVDPLSTLQML 187 (404)
T ss_dssp CCTTHHHHH---------HHHHGGGGGTSEEEEESSCSEEEEEEETTTEEEEEEECSEEEEEEECCSSCCSCHHHHHHHH
T ss_pred CCccHHHHH---------HHHHHhcCCCeEEEEecCchHhhcccCCCcEEEEEEECceEEEEEccCCcchHHHHHHHHHH
Confidence 45543220 1233321 1 100122 3667899977666544311 1122 2 1 2334555666
Q ss_pred HhcCCCceEEecCChHHHHHHH-HHHHHHHHHHhh-c-cC---------cc---chHHHHHHHHHHHHHHHHHHh-----
Q 012547 263 FLRRPHFTVWDNGDLVTHEVMG-GLKNVYAIGAAL-T-NE---------SA---TSKSVYFAHCTSEMVFITHLL----- 322 (461)
Q Consensus 263 ll~~~g~~v~~s~Di~gve~~g-alKNv~Ai~~Gi-~-~g---------~~---n~~a~l~~~~~~Em~~l~~a~----- 322 (461)
++..++ +..++|+++++|.+ +..|...+..++ . ++ .+ ...+.++.+++.|+.++++++
T Consensus 188 ~~~~~~--~~~~~di~~~~l~~N~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~E~~~va~a~~~~~~ 265 (404)
T 3c7a_A 188 HGAEPV--FRLAKHFLEMLIMSYSFVHPAILFGRWGSWDGKPVPEAPLFYQGIDQATADMLTACSNECKDVANAIMAACP 265 (404)
T ss_dssp HCSSSE--EEECSCHHHHHHTTCTTHHHHHHHHHHTTCCSCCBSSCCBSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHST
T ss_pred hCCCCc--eeEcCCEeeeeecCCceeccHHHHHHHHhhhcCCCCCCCccccCCCHHHHHHHHHHHHHHHHHHHHHhhhcC
Confidence 654332 44799999999984 445554444444 1 11 12 245688999999999999999
Q ss_pred CCCchhhccChhhhhhhhccccchhHHHHHHhcCCChhhHhh---------------------hhcCCCccchHH-HHHH
Q 012547 323 AEEPEKLAGPLLADTYVTLLKGRNAWYGQELAKGRLTLDLGD---------------------SIKGKGMIQGIS-AVKA 380 (461)
Q Consensus 323 G~~~~t~~g~glgDl~~T~~~sRN~~~G~~l~~g~~~~~~~~---------------------~~~~~~~vEG~~-~~~~ 380 (461)
|.++.++ .+++|++.+|... .++.+.+..++.+ .++.+...||+. +..+
T Consensus 266 G~~~~~~--~~~~d~~~~~~~~-------~~~~~~s~~~~~~~~~~~~d~~~P~~~te~~~~~d~~~r~~~Edv~~~~~~ 336 (404)
T 3c7a_A 266 GNDLSDV--KDIYQWYLEYYHE-------DIQDDHDLYHAITTNKSYKGLVHPVKAVDGGVAPDFGNRYLTEDIPMGMIV 336 (404)
T ss_dssp TCCCTTC--CCHHHHHHHHSTT-------TBSCCSSHHHHHHTBGGGTTCBCCEEEETTEEEECCCSSTTTTTTTTTHHH
T ss_pred CCCcccC--CCHHHHHHHhCCC-------ccCChhhHHHHHHhhhhhccCCCCCCCcCCCccCCccccccccccccchHH
Confidence 9987665 4688988888321 1222222211111 123444689886 8889
Q ss_pred HHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHh
Q 012547 381 FYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILI 418 (461)
Q Consensus 381 v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~il~ 418 (461)
++++++++|+ + +|++++||++++
T Consensus 337 v~~la~~~gV--------------~-tP~~~~l~~l~~ 359 (404)
T 3c7a_A 337 FKGVAIAAGV--------------A-IPSNDKLIMWAQ 359 (404)
T ss_dssp HHHHHHHHTC--------------C-CHHHHHHHHHHH
T ss_pred HHHHHHHhCC--------------C-CchHHHHHHHHH
Confidence 9999999995 7 899999999986
No 18
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=99.90 E-value=2.5e-23 Score=220.31 Aligned_cols=289 Identities=13% Similarity=0.073 Sum_probs=202.4
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
..|||+|||+|+||+++|..|+++ | ++|++|++++++++.+++ + .++.|.+++.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~-G-----~~V~~~d~~~~~v~~l~~---------~--------~~~i~e~gl~--- 60 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADI-G-----HDVFCLDVDQAKIDILNN---------G--------GVPIHEPGLK--- 60 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHT---------T--------CCSSCCTTHH---
T ss_pred CCceEEEECcCHHHHHHHHHHHhC-C-----CEEEEEECCHHHHHHHHC---------C--------CCCcCCCCHH---
Confidence 458999999999999999999999 8 999999999988776432 2 1344555432
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCc----------hhHHHHHHHHHHHhhccCCCC
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS----------TETKEVFEEISRYWKERITVP 191 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps----------~~~~~vl~~i~~~l~~~~~~~ 191 (461)
+++.+... ..++.+++|+++++++||+||+|||+ +++++++++|.+++++ ++
T Consensus 61 --------~~l~~~~~-------~~~l~~ttd~~~a~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~---~~ 122 (478)
T 2y0c_A 61 --------EVIARNRS-------AGRLRFSTDIEAAVAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTG---FK 122 (478)
T ss_dssp --------HHHHHHHH-------TTCEEEECCHHHHHHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCS---CE
T ss_pred --------HHHHHhcc-------cCCEEEECCHHHHhhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCC---CC
Confidence 11111000 02578999998889999999999998 8999999999999987 67
Q ss_pred EEEEEeecCccccccccccCCHHHHHHhHhCCCC--CcEEEEeCcchhHhhhc----cCceEEEEeCC-h----hHHHHH
Q 012547 192 VIISLAKGVEAELEAVPRIITPTQMINRATGVPI--ENILYLGGPNIASEIYN----KEYANARICGA-E----KWRKPL 260 (461)
Q Consensus 192 iIIs~tkGi~~~~~~~~~~~~~se~i~~~lg~~~--~~v~vlsGPn~a~ev~~----g~~~~~~~~~~-~----~~~~~l 260 (461)
+||..+ |+.+. +...+++.+.+.++.+. ..+.+.++|.++.+... +.+..+++++. + +..+.+
T Consensus 123 iVV~~S-Tv~~g-----t~~~l~~~l~~~~~~g~~~~~~~v~~~Pe~~~eG~~~~~~~~p~~iviG~~~~~~~~~~~~~~ 196 (478)
T 2y0c_A 123 VIVDKS-TVPVG-----TAERVRAAVAEELAKRGGDQMFSVVSNPEFLKEGAAVDDFTRPDRIVIGCDDDVPGERARELM 196 (478)
T ss_dssp EEEECS-CCCTT-----HHHHHHHHHHHHHHHTTCCCCEEEEECCCCCCTTCHHHHHHSCSCEEEECCSSHHHHHHHHHH
T ss_pred EEEEeC-CcCCC-----chHHHHHHHHHHhcCCCCCccEEEEEChhhhcccceeeccCCCCEEEEEECCCcccHHHHHHH
Confidence 776655 77665 33446666665432111 35678999999988664 45555566544 4 577889
Q ss_pred HHHhcCCCc---eEEecCChHHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhhccChhhhh
Q 012547 261 AKFLRRPHF---TVWDNGDLVTHEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGPLLADT 337 (461)
Q Consensus 261 ~~ll~~~g~---~v~~s~Di~gve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g~glgDl 337 (461)
+++|+. .+ .++...|+.+.||.|.+-|.+ .++....++|+..+|+++|++++++.. +++
T Consensus 197 ~~l~~~-~~~~~~~~~~~di~~ae~~Kl~~N~~--------------~a~~ia~~nE~~~la~~~Gid~~~v~~-~i~-- 258 (478)
T 2y0c_A 197 KKLYAP-FNRNHERTLYMDVRSAEFTKYAANAM--------------LATRISFMNELANLADRFGADIEAVRR-GIG-- 258 (478)
T ss_dssp HHHTGG-GGSSSCCEEEECHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHTTCCHHHHHH-HHH--
T ss_pred HHHHHH-HhccCCeEEcCCHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHhCCCHHHHHH-HHh--
Confidence 999985 55 378889999999999888872 245557899999999999999987642 121
Q ss_pred hhhc--cccchhHHHHHHhcCCChhhHhhhhcCCCccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHH
Q 012547 338 YVTL--LKGRNAWYGQELAKGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYK 415 (461)
Q Consensus 338 ~~T~--~~sRN~~~G~~l~~g~~~~~~~~~~~~~~~vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~ 415 (461)
+- ...++++.|..++. ..+ ....+++.++++++|+ + +|+++++++
T Consensus 259 --~~~rig~~~~~pG~g~gg-~c~---------------~kD~~~l~~~A~~~gv--------------~-~pl~~~v~~ 305 (478)
T 2y0c_A 259 --SDPRIGYHFLYAGCGYGG-SCF---------------PKDVEALIRTADEHGQ--------------S-LQILKAVSS 305 (478)
T ss_dssp --TSTTTCSTTCCCSSCCCS-SSH---------------HHHHHHHHHHHHHTTC--------------C-CHHHHHHHH
T ss_pred --cCCccCcccCCCCccccc-CcC---------------HHHHHHHHHHHHHcCC--------------C-cHHHHHHHH
Confidence 10 01224444432321 111 1125689999999995 6 899999999
Q ss_pred HHhcCCC-HHHHHHHHH
Q 012547 416 ILIMRES-PIQAILEAL 431 (461)
Q Consensus 416 il~~~~~-~~~~~~~~l 431 (461)
+...... ..+-+.+.|
T Consensus 306 in~~~~~~~~~~~~~~~ 322 (478)
T 2y0c_A 306 VNATQKRVLADKIVARF 322 (478)
T ss_dssp HHHHHTTHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHh
Confidence 9986432 334444444
No 19
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=99.89 E-value=4.5e-22 Score=208.88 Aligned_cols=222 Identities=16% Similarity=0.124 Sum_probs=171.8
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhccC
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (461)
.+|+|||+|+||+++|..|+++ | |+|++|+|++++++.++ ++ +++.|++++.
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~-G-----~~V~~~D~~~~kv~~l~---------~g--------~~~~~epgl~----- 60 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDF-G-----HEVVCVDKDARKIELLH---------QN--------VMPIYEPGLD----- 60 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCSTTHHHHT---------TT--------CCSSCCTTHH-----
T ss_pred eEEEEEcCCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHh---------cC--------CCCccCCCHH-----
Confidence 5899999999999999999999 8 99999999999887643 32 3677877653
Q ss_pred CccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch-----------hHHHHHHHHHHHhhccCCCCE
Q 012547 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-----------ETKEVFEEISRYWKERITVPV 192 (461)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~-----------~~~~vl~~i~~~l~~~~~~~i 192 (461)
+++.+.+. ..++.+++|+++++++||+||+|||+. +++++++++.+++++ +++
T Consensus 61 ------~~~~~~~~-------~g~l~~ttd~~ea~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~---g~i 124 (446)
T 4a7p_A 61 ------ALVASNVK-------AGRLSFTTDLAEGVKDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTK---PSV 124 (446)
T ss_dssp ------HHHHHHHH-------TTCEEEESCHHHHHTTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCS---CCE
T ss_pred ------HHHHhhcc-------cCCEEEECCHHHHHhcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCC---CCE
Confidence 22221110 025889999999999999999998754 599999999999887 677
Q ss_pred EEEEeecCccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhc----cCceEEEEeCC-hhHHHHHHHHhcCC
Q 012547 193 IISLAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYN----KEYANARICGA-EKWRKPLAKFLRRP 267 (461)
Q Consensus 193 IIs~tkGi~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~----g~~~~~~~~~~-~~~~~~l~~ll~~~ 267 (461)
||..+ ++++. +...+++.+.+..+. ..+.+.++|+++.++.. ..++.++++++ ++..+.++++|+..
T Consensus 125 VV~~S-Tv~pg-----tt~~l~~~l~e~~~~--~d~~v~~~Pe~a~eG~a~~d~~~p~~ivvG~~~~~~~~~~~~ly~~~ 196 (446)
T 4a7p_A 125 IVTKS-TVPVG-----TGDEVERIIAEVAPN--SGAKVVSNPEFLREGAAIEDFKRPDRVVVGTEDEFARQVMREIYRPL 196 (446)
T ss_dssp EEECS-CCCTT-----HHHHHHHHHHHHSTT--SCCEEEECCCCCCTTSHHHHHHSCSCEEEECSCHHHHHHHHHHHCSC
T ss_pred EEEeC-CCCch-----HHHHHHHHHHHhCCC--CCceEEeCcccccccchhhhccCCCEEEEeCCcHHHHHHHHHHHHHH
Confidence 77765 88776 456677777765432 45788999999998775 55666666654 67789999999764
Q ss_pred Cce---EEecCChHHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhhcc
Q 012547 268 HFT---VWDNGDLVTHEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAG 331 (461)
Q Consensus 268 g~~---v~~s~Di~gve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g 331 (461)
+-. ++...|+.+.|++|.+.|.+ .++....++|+..+|+++|++++++.+
T Consensus 197 ~~~~~~~~~~~d~~~aE~~Kl~~N~~--------------~a~~ia~~nE~~~l~~~~GiD~~~v~~ 249 (446)
T 4a7p_A 197 SLNQSAPVLFTGRRTSELIKYAANAF--------------LAVKITFINEIADLCEQVGADVQEVSR 249 (446)
T ss_dssp C-----CEEEECHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred hcCCCeEEEeCCHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 332 47788999999998888772 345567899999999999999988764
No 20
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=99.87 E-value=1.8e-21 Score=204.65 Aligned_cols=224 Identities=13% Similarity=0.097 Sum_probs=168.2
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhccC
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (461)
|||+|||+|+||+++|..|+++ | ++|++|++++++++.++ ++ .++.|.+++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~-G-----~~V~~~D~~~~~v~~l~---------~g--------~~~i~e~gl~----- 54 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL-G-----ANVRCIDTDRNKIEQLN---------SG--------TIPIYEPGLE----- 54 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHH---------HT--------CSCCCSTTHH-----
T ss_pred CEEEEECcCHHHHHHHHHHHhc-C-----CEEEEEECCHHHHHHHH---------cC--------CCcccCCCHH-----
Confidence 8999999999999999999999 8 99999999998877533 22 2445555432
Q ss_pred CccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch----------hHHHHHHHHHHHhhccCCCCEE
Q 012547 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------ETKEVFEEISRYWKERITVPVI 193 (461)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~----------~~~~vl~~i~~~l~~~~~~~iI 193 (461)
+++.+... ..++.+++|+++++++||+||+|||+. +++++++++.+++++ +++|
T Consensus 55 ------~~l~~~~~-------~~~l~~t~d~~ea~~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~---g~iV 118 (450)
T 3gg2_A 55 ------KMIARNVK-------AGRLRFGTEIEQAVPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSR---YILI 118 (450)
T ss_dssp ------HHHHHHHH-------TTSEEEESCHHHHGGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCS---CEEE
T ss_pred ------HHHHhhcc-------cCcEEEECCHHHHHhcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCC---CCEE
Confidence 11211000 025788999999999999999999987 899999999999987 6777
Q ss_pred EEEeecCccccccccccCCHHHHHHhHhCCC--CCcEEEEeCcchhHhhhc----cCceEEEEeC-ChhHHHHHHHHhcC
Q 012547 194 ISLAKGVEAELEAVPRIITPTQMINRATGVP--IENILYLGGPNIASEIYN----KEYANARICG-AEKWRKPLAKFLRR 266 (461)
Q Consensus 194 Is~tkGi~~~~~~~~~~~~~se~i~~~lg~~--~~~v~vlsGPn~a~ev~~----g~~~~~~~~~-~~~~~~~l~~ll~~ 266 (461)
|..+ ++.+. +...+++.+.+..+.. ...+.+.+||+++.+... ..++.+++++ +++..+.++++|+.
T Consensus 119 V~~S-Tv~pg-----t~~~l~~~l~~~~~~~~~~~d~~v~~~Pe~a~eG~~~~~~~~p~~ivvG~~~~~~~~~~~~l~~~ 192 (450)
T 3gg2_A 119 VTKS-TVPVG-----SYRLIRKAIQEELDKREVLIDFDIASNPEFLKEGNAIDDFMKPDRVVVGVDSDRARELITSLYKP 192 (450)
T ss_dssp EECS-CCCTT-----HHHHHHHHHHHHHHHTTCCCCEEEEECCCCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHHTT
T ss_pred EEee-eCCCc-----chHHHHHHHHHhccccCcCcceeEEechhhhcccchhhhccCCCEEEEEcCCHHHHHHHHHHHHH
Confidence 7666 67665 3455666666643211 134788999999988765 4566566654 57788999999985
Q ss_pred CCc--eEEecCChHHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhhcc
Q 012547 267 PHF--TVWDNGDLVTHEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAG 331 (461)
Q Consensus 267 ~g~--~v~~s~Di~gve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g 331 (461)
-+- .++...|+.+.|+.|..-|. ..++...+++|+..+|+++|++++++.+
T Consensus 193 ~~~~~~~~~~~d~~~aE~~Kl~~N~--------------~~a~~ia~~nE~~~l~~~~Gid~~~v~~ 245 (450)
T 3gg2_A 193 MLLNNFRVLFMDIASAEMTKYAANA--------------MLATRISFMNDVANLCERVGADVSMVRL 245 (450)
T ss_dssp TCCSCCCEEEECHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHTCCHHHHHH
T ss_pred HhcCCCeEEecCHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 432 15678899999998877766 3356667999999999999999998865
No 21
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.84 E-value=4e-20 Score=193.41 Aligned_cols=292 Identities=16% Similarity=0.096 Sum_probs=195.0
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhccC
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (461)
|||+|||+|+||+++|..|+++ | ++|++|++++++++.+++ ++ .+.+.+++.
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~-G-----~~V~~~d~~~~~~~~l~~---------~~--------~~i~e~~l~----- 52 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSAR-G-----HEVIGVDVSSTKIDLINQ---------GK--------SPIVEPGLE----- 52 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHT---------TC--------CSSCCTTHH-----
T ss_pred CEEEEECCCHHHHHHHHHHHHC-C-----CEEEEEECCHHHHHHHhC---------CC--------CCcCCCCHH-----
Confidence 7999999999999999999999 8 999999999987775432 11 233433321
Q ss_pred CccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchh----------HHHHHHHHHHHhhccCCCCEE
Q 012547 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE----------TKEVFEEISRYWKERITVPVI 193 (461)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~----------~~~vl~~i~~~l~~~~~~~iI 193 (461)
+++..+... ..+.+++|+++++++||+||+|||+.. ++++++++.+++++...+++|
T Consensus 53 ------~~~~~~~~~-------g~l~~t~~~~~~~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iV 119 (436)
T 1mv8_A 53 ------ALLQQGRQT-------GRLSGTTDFKKAVLDSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTV 119 (436)
T ss_dssp ------HHHHHHHHT-------TCEEEESCHHHHHHTCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEE
T ss_pred ------HHHHhhccc-------CceEEeCCHHHHhccCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEE
Confidence 111110000 147888999988999999999999765 999999999988750002566
Q ss_pred EEEeecCccccccccccCCHHHHHHhHhCCCC-CcEEEEeCcchhHhhhc----cCceEEEEeC-ChhHHHHHHHHhcCC
Q 012547 194 ISLAKGVEAELEAVPRIITPTQMINRATGVPI-ENILYLGGPNIASEIYN----KEYANARICG-AEKWRKPLAKFLRRP 267 (461)
Q Consensus 194 Is~tkGi~~~~~~~~~~~~~se~i~~~lg~~~-~~v~vlsGPn~a~ev~~----g~~~~~~~~~-~~~~~~~l~~ll~~~ 267 (461)
|..+ ++.+.. +...+.+.+.+..+... ..+.+..+|.++.+... ..+..++++. +++..+.++++|+..
T Consensus 120 V~~S-tv~~g~----t~~~l~~~l~~~~g~~~~~~~~v~~~Pe~~~~G~~~~~~~~~~~iv~G~~~~~~~~~~~~l~~~~ 194 (436)
T 1mv8_A 120 VVRS-TVLPGT----VNNVVIPLIEDCSGKKAGVDFGVGTNPEFLRESTAIKDYDFPPMTVIGELDKQTGDLLEEIYREL 194 (436)
T ss_dssp EECS-CCCTTH----HHHTHHHHHHHHHSCCBTTTBEEEECCCCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHHTTS
T ss_pred EEeC-CcCCCc----hHHHHHHHHHHhcCcccCCcEEEEECcccccccccchhccCCCEEEEEcCCHHHHHHHHHHHhcc
Confidence 6443 554441 13445566655434211 23567789998776443 2333345544 477788999999998
Q ss_pred CceEEecCChHHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhhccC-hhhhhhhhccc--c
Q 012547 268 HFTVWDNGDLVTHEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP-LLADTYVTLLK--G 344 (461)
Q Consensus 268 g~~v~~s~Di~gve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g~-glgDl~~T~~~--s 344 (461)
+.+++. .|+...||.+.+-|.+ .++....++|+..+|+++|.+++++... +...- .. +
T Consensus 195 ~~~v~~-~~~~~ae~~Kl~~N~~--------------~a~~ia~~nE~~~l~~~~Gid~~~v~~~~~~~~r----~~~~~ 255 (436)
T 1mv8_A 195 DAPIIR-KTVEVAEMIKYTCNVW--------------HAAKVTFANEIGNIAKAVGVDGREVMDVICQDHK----LNLSR 255 (436)
T ss_dssp SSCEEE-EEHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHTTSCHHHHHHHHTTCTT----TTTSS
T ss_pred CCCEEc-CCHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCCC----CCCcc
Confidence 888777 8898999999888772 1344568899999999999998876542 22100 12 4
Q ss_pred chhHHHHHHhcCCChhhHhhhhcCCCccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhcCCCHH
Q 012547 345 RNAWYGQELAKGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIMRESPI 424 (461)
Q Consensus 345 RN~~~G~~l~~g~~~~~~~~~~~~~~~vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~il~~~~~~~ 424 (461)
|++..|..++.+.... ...++.++++++|+ + +|++++++++ + +..|.
T Consensus 256 ~~~~pg~g~gg~~~~k----------------D~~~l~~~a~~~g~--------------~-~pl~~~v~~i-n-~~~~~ 302 (436)
T 1mv8_A 256 YYMRPGFAFGGSCLPK----------------DVRALTYRASQLDV--------------E-HPMLGSLMRS-N-SNQVQ 302 (436)
T ss_dssp TTCSCCSCCCSSSHHH----------------HHHHHHHHHHHTTC--------------C-CTTGGGHHHH-H-HHHHH
T ss_pred cCCCCcccccCcCcHh----------------hHHHHHHHHHHcCC--------------C-cHHHHHHHHH-H-hHhHH
Confidence 5555544332211111 13578999999995 6 8999999999 3 34466
Q ss_pred HHHHHHHhc
Q 012547 425 QAILEALRD 433 (461)
Q Consensus 425 ~~~~~~l~~ 433 (461)
..+.+++..
T Consensus 303 ~~~~~~~~~ 311 (436)
T 1mv8_A 303 KAFDLITSH 311 (436)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHHHh
Confidence 666666554
No 22
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.81 E-value=5e-19 Score=174.50 Aligned_cols=260 Identities=13% Similarity=0.042 Sum_probs=175.4
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
||||+|||+|+||+++|..|+++ | ++|++|+|++++++.+.+
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~-G-----~~V~~~dr~~~~~~~~~~-------------------------------- 42 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRA-G-----FDVTVWNRNPAKCAPLVA-------------------------------- 42 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHH-T-----CCEEEECSSGGGGHHHHH--------------------------------
T ss_pred CCeEEEEccCHHHHHHHHHHHHC-C-----CeEEEEcCCHHHHHHHHH--------------------------------
Confidence 47899999999999999999999 8 999999999876653110
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch-hHHHHH---HHHHHHhhccCCCCEEEEEee
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF---EEISRYWKERITVPVIISLAK 198 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~-~~~~vl---~~i~~~l~~~~~~~iIIs~tk 198 (461)
.++..+++++++++++|+||+|||+. .+++++ +++.+.+.+ ++++|.+++
T Consensus 43 -----------------------~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l~~~l~~---g~~vv~~st 96 (287)
T 3pdu_A 43 -----------------------LGARQASSPAEVCAACDITIAMLADPAAAREVCFGANGVLEGIGG---GRGYIDMST 96 (287)
T ss_dssp -----------------------HTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGTCCT---TCEEEECSC
T ss_pred -----------------------CCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhhhhcccC---CCEEEECCC
Confidence 02456678889999999999999985 899998 788887776 678887765
Q ss_pred cCccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHh--hhccCceEEEEeCChhHHHHHHHHhcCCCceEEecCC
Q 012547 199 GVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASE--IYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGD 276 (461)
Q Consensus 199 Gi~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~e--v~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~v~~s~D 276 (461)
+ .+. +...+.+.+.+ .+ +.++.+|.+... ...+..+ ++++++++..+.++++|+..+.+++...+
T Consensus 97 ~-~~~-----~~~~~~~~~~~-~g-----~~~~~~pv~g~~~~a~~g~l~-~~~gg~~~~~~~~~~ll~~~g~~~~~~g~ 163 (287)
T 3pdu_A 97 V-DDE-----TSTAIGAAVTA-RG-----GRFLEAPVSGTKKPAEDGTLI-ILAAGDQSLFTDAGPAFAALGKKCLHLGE 163 (287)
T ss_dssp C-CHH-----HHHHHHHHHHH-TT-----CEEEECCEECCHHHHHHTCEE-EEEEECHHHHHHTHHHHHHHEEEEEECSS
T ss_pred C-CHH-----HHHHHHHHHHH-cC-----CEEEECCccCCHHHHhcCCEE-EEEeCCHHHHHHHHHHHHHhCCCEEEcCC
Confidence 3 332 11222233322 12 122333332211 1233322 34567788889999999988888888777
Q ss_pred hHHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhhccC-hhhhhhhhccccchhHHHHHHhc
Q 012547 277 LVTHEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP-LLADTYVTLLKGRNAWYGQELAK 355 (461)
Q Consensus 277 i~gve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g~-glgDl~~T~~~sRN~~~G~~l~~ 355 (461)
.-..++.+.+-|. ....+..+++|+..++++.|.+++++.+. +.+. ..+...+|+ +..+.+
T Consensus 164 ~g~~~~~Kl~~N~--------------~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~--~~s~~~~~~--~~~~~~ 225 (287)
T 3pdu_A 164 VGQGARMKLVVNM--------------IMGQMMTALGEGMALGRNCGLDGGQLLEVLDAGA--MANPMFKGK--GQMLLS 225 (287)
T ss_dssp TTHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHST--TCCHHHHHH--HHHHHH
T ss_pred CChHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcc--ccChHHHhh--cccccc
Confidence 6556676666665 22445568899999999999999988653 2211 011122333 344443
Q ss_pred CCChhhHhhhhcCCCccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhc
Q 012547 356 GRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIM 419 (461)
Q Consensus 356 g~~~~~~~~~~~~~~~vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~il~~ 419 (461)
+... .+...-.+....+.+.+++++.|+ + +|+++.+++++..
T Consensus 226 ~~~~-------~~~~~~~~~kd~~~~~~~a~~~g~--------------~-~p~~~~~~~~~~~ 267 (287)
T 3pdu_A 226 GEFP-------TSFPLKHMQKDLRLAVELGDRLGQ--------------P-LHGAATANESFKR 267 (287)
T ss_dssp TCCC-------CSSBHHHHHHHHHHHHHHHHHHTC--------------C-CHHHHHHHHHHHH
T ss_pred CCCC-------CCCcHHHHHHHHHHHHHHHHHcCC--------------C-ChHHHHHHHHHHH
Confidence 3210 111234677888899999999995 6 8999999988753
No 23
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.81 E-value=1.1e-18 Score=172.24 Aligned_cols=257 Identities=14% Similarity=0.099 Sum_probs=170.5
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhccC
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (461)
|||+|||+|.||+++|..|++. | ++|.+|+|++++++.+.+
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~-g-----~~V~~~~~~~~~~~~~~~--------------------------------- 46 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA-G-----YSLVVSDRNPEAIADVIA--------------------------------- 46 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHH---------------------------------
T ss_pred ceEEEECchHHHHHHHHHHHhC-C-----CEEEEEeCCHHHHHHHHH---------------------------------
Confidence 7999999999999999999998 8 899999999875543110
Q ss_pred CccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCC-chhHHHHH---HHHHHHhhccCCCCEEEEEeec
Q 012547 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLP-STETKEVF---EEISRYWKERITVPVIISLAKG 199 (461)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVp-s~~~~~vl---~~i~~~l~~~~~~~iIIs~tkG 199 (461)
.++..+++++++++++|+||+||| +..++.++ +++.+.+++ ++++|++++|
T Consensus 47 ----------------------~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l~~~l~~---~~~vv~~s~~ 101 (299)
T 1vpd_A 47 ----------------------AGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKP---GTVLIDMSSI 101 (299)
T ss_dssp ----------------------TTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHCCT---TCEEEECSCC
T ss_pred ----------------------CCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcchHhhcCCC---CCEEEECCCC
Confidence 023455678888889999999999 67788888 778888876 6889999888
Q ss_pred CccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhh--ccCceEEEEeCChhHHHHHHHHhcCCCceEEecCCh
Q 012547 200 VEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIY--NKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDL 277 (461)
Q Consensus 200 i~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~--~g~~~~~~~~~~~~~~~~l~~ll~~~g~~v~~s~Di 277 (461)
..... +.+.+.++.. .+.++..|-+..... .+. ..++++++++..+.++++|+..|++++...|.
T Consensus 102 ~~~~~----------~~l~~~~~~~--g~~~~~~pv~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ll~~~g~~~~~~~~~ 168 (299)
T 1vpd_A 102 APLAS----------REISDALKAK--GVEMLDAPVSGGEPKAIDGT-LSVMVGGDKAIFDKYYDLMKAMAGSVVHTGDI 168 (299)
T ss_dssp CHHHH----------HHHHHHHHTT--TCEEEECCEESHHHHHHHTC-EEEEEESCHHHHHHHHHHHHTTEEEEEEEEST
T ss_pred CHHHH----------HHHHHHHHHc--CCeEEEecCCCCHhHHhcCC-EEEEeCCCHHHHHHHHHHHHHHcCCeEEeCCc
Confidence 65321 2344444211 112222233211111 222 22345667788899999999999999888877
Q ss_pred HHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhhccC-hhhhhhhhccccchhHHHHHHhcC
Q 012547 278 VTHEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP-LLADTYVTLLKGRNAWYGQELAKG 356 (461)
Q Consensus 278 ~gve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g~-glgDl~~T~~~sRN~~~G~~l~~g 356 (461)
....|.+.+-|. ...++..++.|+..++++.|.+++++.++ +.++. .+...+++.. ..+.+
T Consensus 169 ~~~~~~Kl~~n~--------------~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~--~s~~~~~~~~-~~l~~- 230 (299)
T 1vpd_A 169 GAGNVTKLANQV--------------IVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLA--GSTVLDAKAP-MVMDR- 230 (299)
T ss_dssp THHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTT--CCHHHHHHHH-HHHTT-
T ss_pred CHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHccCC--CCHHHHHhhh-HhhcC-
Confidence 666777766664 23566789999999999999998877553 22111 0000011100 01110
Q ss_pred CChhhHhhhhcCCCccchH-HHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHh
Q 012547 357 RLTLDLGDSIKGKGMIQGI-SAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILI 418 (461)
Q Consensus 357 ~~~~~~~~~~~~~~~vEG~-~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~il~ 418 (461)
....+.+++.. ...+.++++++++|+ + +|+++++|+++.
T Consensus 231 --------~~~~g~~~~~~~kd~~~~~~~a~~~gv--------------~-~p~~~~~~~~~~ 270 (299)
T 1vpd_A 231 --------NFKPGFRIDLHIKDLANALDTSHGVGA--------------Q-LPLTAAVMEMMQ 270 (299)
T ss_dssp --------CCCCSSBHHHHHHHHHHHHHHHHHHTC--------------C-CHHHHHHHHHHH
T ss_pred --------CCCCCCChHHHHHHHHHHHHHHHHcCC--------------C-ChHHHHHHHHHH
Confidence 01111233332 356789999999995 6 899999999886
No 24
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.79 E-value=2.9e-18 Score=169.00 Aligned_cols=261 Identities=11% Similarity=0.032 Sum_probs=177.0
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhccC
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (461)
|||+|||+|.||+++|..|+++ | ++|++|+|++++++.+.+
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~-G-----~~V~~~dr~~~~~~~~~~--------------------------------- 42 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA-G-----CSVTIWNRSPEKAEELAA--------------------------------- 42 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSGGGGHHHHH---------------------------------
T ss_pred CEEEEEeecHHHHHHHHHHHHC-C-----CeEEEEcCCHHHHHHHHH---------------------------------
Confidence 7999999999999999999999 8 999999999876653110
Q ss_pred CccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCC-chhHHHHH---HHHHHHhhccCCCCEEEEEeec
Q 012547 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLP-STETKEVF---EEISRYWKERITVPVIISLAKG 199 (461)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVp-s~~~~~vl---~~i~~~l~~~~~~~iIIs~tkG 199 (461)
.++..+++++++++++|+||+||| +..+++++ +++.+.+++ ++++|.++ +
T Consensus 43 ----------------------~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~---~~~vi~~s-t 96 (287)
T 3pef_A 43 ----------------------LGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGVLEGIGE---GRGYVDMS-T 96 (287)
T ss_dssp ----------------------TTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHCCT---TCEEEECS-C
T ss_pred ----------------------CCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchHhhcCCC---CCEEEeCC-C
Confidence 034566889999999999999999 57899999 888888876 67777764 4
Q ss_pred CccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEeCChhHHHHHHHHhcCCCceEEecCChHH
Q 012547 200 VEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVT 279 (461)
Q Consensus 200 i~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~v~~s~Di~g 279 (461)
+.+.. ...+.+.+.+ .+.......+..+|..+. .+.. .++++++++..+.++++|+..+.+++...+.-.
T Consensus 97 ~~~~~-----~~~~~~~~~~-~g~~~~~~pv~g~~~~a~---~g~l-~~~~gg~~~~~~~~~~ll~~~g~~~~~~g~~g~ 166 (287)
T 3pef_A 97 VDPAT-----SQRIGVAVVA-KGGRFLEAPVSGSKKPAE---DGTL-IILAAGDRNLYDEAMPGFEKMGKKIIHLGDVGK 166 (287)
T ss_dssp CCHHH-----HHHHHHHHHH-TTCEEEECCEECCHHHHH---HTCE-EEEEEECHHHHHHHHHHHHHHEEEEEECSSTTH
T ss_pred CCHHH-----HHHHHHHHHH-hCCEEEECCCcCCHHHHh---cCCE-EEEEeCCHHHHHHHHHHHHHhCCCeEEeCCCCH
Confidence 44431 2223333332 121100112344555543 2322 234567788889999999988888888777655
Q ss_pred HHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhhccC-hhhhhhhhccccchhHHHHHHhcCCC
Q 012547 280 HEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP-LLADTYVTLLKGRNAWYGQELAKGRL 358 (461)
Q Consensus 280 ve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g~-glgDl~~T~~~sRN~~~G~~l~~g~~ 358 (461)
.++.+.+-|.+ ......+++|+..++++.|.+++++.+. +.+. ..+...+|+ +..+.++..
T Consensus 167 ~~~~Kl~~N~~--------------~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~--~~s~~~~~~--~~~~~~~~~ 228 (287)
T 3pef_A 167 GAEMKLVVNMV--------------MGGMMACFCEGLALGEKAGLATDAILDVIGAGA--MANPMFALK--GGLIRDRNF 228 (287)
T ss_dssp HHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHST--TCCHHHHHH--HHHHHTTCC
T ss_pred HHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcc--cccHHHHHH--hhhhhcCCC
Confidence 67777666662 2344567899999999999999988653 2221 011122333 444444321
Q ss_pred hhhHhhhhcCCCccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhc
Q 012547 359 TLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIM 419 (461)
Q Consensus 359 ~~~~~~~~~~~~~vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~il~~ 419 (461)
. .+-..-.+....+.+.+++++.|+ + +|+++.+++++..
T Consensus 229 ~-------~~~~~~~~~kd~~~~~~~a~~~g~--------------~-~p~~~~~~~~~~~ 267 (287)
T 3pef_A 229 A-------PAFPLKHMQKDLRLAVALGDRVGQ--------------P-LVASAAANELFKG 267 (287)
T ss_dssp C-------CSSBHHHHHHHHHHHHHHHHHHTC--------------C-CHHHHHHHHHHHH
T ss_pred C-------CCCchHHHHHHHHHHHHHHHHcCC--------------C-ChHHHHHHHHHHH
Confidence 0 011124667778899999999995 6 8999999988753
No 25
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=99.79 E-value=3.3e-18 Score=172.44 Aligned_cols=287 Identities=14% Similarity=0.129 Sum_probs=170.8
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
+|||+|||+|+||+++|..|+++ | ++|++|+|++++++.+++++ . .++.+.. +.
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~-g-----~~V~~~~r~~~~~~~~~~~~--------~----------~~~~~~~--~~ 57 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALK-G-----QSVLAWDIDAQRIKEIQDRG--------A----------IIAEGPG--LA 57 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHHHT--------S----------EEEESSS--CC
T ss_pred cCeEEEECCCHHHHHHHHHHHhC-C-----CEEEEEeCCHHHHHHHHhcC--------C----------eEEeccc--cc
Confidence 38999999999999999999998 8 89999999987766532210 0 1111100 00
Q ss_pred CCccchhhhhhhcccccCCCCCCCCe-EEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecCc
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPL-KVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i-~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~ 201 (461)
. ...+ .+++|+++++.++|+||+|||++..+++++++.+++++ +++||++ +|+.
T Consensus 58 ~---------------------~~~~~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~l~~~l~~---~~~vv~~-~~~~ 112 (359)
T 1bg6_A 58 G---------------------TAHPDLLTSDIGLAVKDADVILIVVPAIHHASIAANIASYISE---GQLIILN-PGAT 112 (359)
T ss_dssp E---------------------EECCSEEESCHHHHHTTCSEEEECSCGGGHHHHHHHHGGGCCT---TCEEEES-SCCS
T ss_pred c---------------------ccccceecCCHHHHHhcCCEEEEeCCchHHHHHHHHHHHhCCC---CCEEEEc-CCCc
Confidence 0 0023 46788888889999999999999999999999998887 6778877 5643
Q ss_pred cccccccccCCHHHHHHhHh-------CCCCCcEE-EEeCcchhHhhh-ccCceEEEE-e-CChhHHHHHHHHhcCCCce
Q 012547 202 AELEAVPRIITPTQMINRAT-------GVPIENIL-YLGGPNIASEIY-NKEYANARI-C-GAEKWRKPLAKFLRRPHFT 270 (461)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~l-------g~~~~~v~-vlsGPn~a~ev~-~g~~~~~~~-~-~~~~~~~~l~~ll~~~g~~ 270 (461)
... .. +.+.+.+.. +....+++ .+.||+++...+ .+...+... + .+++..+.++++|.. +
T Consensus 113 ~~~-----~~-~~~~l~~~~~~~v~~~~~~~~~~~~~~~gpg~v~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~--~- 183 (359)
T 1bg6_A 113 GGA-----LE-FRKILRENGAPEVTIGETSSMLFTCRSERPGQVTVNAIKGAMDFACLPAAKAGWALEQIGSVLPQ--Y- 183 (359)
T ss_dssp SHH-----HH-HHHHHHHTTCCCCEEEEESSCSEEEECSSTTEEEEEEECSCEEEEEESGGGHHHHHHHHTTTCTT--E-
T ss_pred hHH-----HH-HHHHHHhcCCCCeEEEEecCCcEEEEeCCCCEEEEEEeecceEEEeccccccHHHHHHHHHHhhh--c-
Confidence 321 11 223333311 00012333 346777665433 133222222 2 233456778888843 3
Q ss_pred EEecCChHHHHHHHHHHHHHHH--------HHhhc----cCc------cchHHHHHHHHHHHHHHHHHHhCCCchhhccC
Q 012547 271 VWDNGDLVTHEVMGGLKNVYAI--------GAALT----NES------ATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP 332 (461)
Q Consensus 271 v~~s~Di~gve~~galKNv~Ai--------~~Gi~----~g~------~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g~ 332 (461)
..++|+ |.+++||+.++ .+|.. +.. .+..+.++.+++.|+..+++++|.+++++.+.
T Consensus 184 -~~~~di----~~k~~~nvn~~~n~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~va~a~G~~~~~~~~~ 258 (359)
T 1bg6_A 184 -VAVENV----LHTSLTNVNAVMHPLPTLLNAARCESGTPFQYYLEGITPSVGSLAEKVDAERIAIAKAFDLNVPSVCEW 258 (359)
T ss_dssp -EECSCH----HHHHHCCHHHHHTHHHHHTTHHHHHTTCCCBHHHHHCCHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHH
T ss_pred -EEcCCh----HhhhccCCCccccHHHHHhhhchhhcCCccchhhcCCCHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHH
Confidence 346775 78888886655 23332 111 22335788899999999999999988665431
Q ss_pred hhhhhhhhccccchhHHHHHHhcCCChhhHhhhhcCCCc-cchHHH-------HHHHHHHHHHcCCCCCCCCCCCCCCcc
Q 012547 333 LLADTYVTLLKGRNAWYGQELAKGRLTLDLGDSIKGKGM-IQGISA-------VKAFYELLSQSSLSVLHPEENKPVATV 404 (461)
Q Consensus 333 glgDl~~T~~~sRN~~~G~~l~~g~~~~~~~~~~~~~~~-vEG~~~-------~~~v~~l~~~~~l~~~~~~~~~~~~~v 404 (461)
+...... ...|. ..... ++ +...+ +. +++ +++... ...++++++++|+
T Consensus 259 -~~~~~~~--~~~~l---~~~~~-~~-sm~~d-~~-~~~e~~~~~~~~D~~~~~g~~~~~a~~~gv-------------- 314 (359)
T 1bg6_A 259 -YKESYGQ--SPATI---YEAVQ-GN-PAYRG-IA-GPINLNTRYFFEDVSTGLVPLSELGRAVNV-------------- 314 (359)
T ss_dssp -C---------CCSH---HHHHH-TC-GGGTT-CB-CCSSSCCHHHHHHHHTTHHHHHHHHHHTTC--------------
T ss_pred -HHHHhCC--CcccH---HHHHh-cc-hhhcC-CC-CCCCCCccceecCcCccHHHHHHHHHHcCC--------------
Confidence 0000000 01100 00000 00 00111 11 222 554332 2489999999995
Q ss_pred cCCcHHHHHHHHHhc
Q 012547 405 ELCPILKMLYKILIM 419 (461)
Q Consensus 405 ~~~Pi~~~ly~il~~ 419 (461)
+ +|+++++|+++..
T Consensus 315 ~-~P~~~~l~~~~~~ 328 (359)
T 1bg6_A 315 P-TPLIDAVLDLISS 328 (359)
T ss_dssp C-CHHHHHHHHHHHH
T ss_pred C-chHHHHHHHHHHH
Confidence 7 8999999998864
No 26
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.79 E-value=3.4e-18 Score=170.49 Aligned_cols=259 Identities=12% Similarity=0.055 Sum_probs=166.7
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
+|||+|||+|+||+++|..|++. | ++|.+|+|+++.++.+.+ .
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~-g-----~~V~~~~~~~~~~~~~~~---------~---------------------- 72 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKM-G-----HTVTVWNRTAEKCDLFIQ---------E---------------------- 72 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSGGGGHHHHH---------T----------------------
T ss_pred CCeEEEEcccHHHHHHHHHHHhC-C-----CEEEEEeCCHHHHHHHHH---------c----------------------
Confidence 48999999999999999999998 8 899999999876543110 0
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCC-chhHHHHHHHHH---HHhhccCCCCEEEEEee
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLP-STETKEVFEEIS---RYWKERITVPVIISLAK 198 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVp-s~~~~~vl~~i~---~~l~~~~~~~iIIs~tk 198 (461)
++..+++++++++++|+||+||| +..+++++.++. +.+.+ +++||++++
T Consensus 73 ------------------------g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~~~~~l~~---~~~vv~~s~ 125 (316)
T 2uyy_A 73 ------------------------GARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQGIRP---GKCYVDMST 125 (316)
T ss_dssp ------------------------TCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCT---TCEEEECSC
T ss_pred ------------------------CCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCchhHhhcCCC---CCEEEECCC
Confidence 23345677788889999999999 788999988754 55665 678888886
Q ss_pred cCccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchh--HhhhccCceEEEEeCChhHHHHHHHHhcCCCceEEecCC
Q 012547 199 GVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIA--SEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGD 276 (461)
Q Consensus 199 Gi~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a--~ev~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~v~~s~D 276 (461)
+.... .+.+.+.++.. ...++.+|.+. .....+... .+++++++..+.++++|+..|++++...|
T Consensus 126 ~~~~~----------~~~l~~~~~~~--~~~~v~~p~~g~~~~~~~g~~~-~~~~g~~~~~~~v~~ll~~~g~~~~~~~~ 192 (316)
T 2uyy_A 126 VDADT----------VTELAQVIVSR--GGRFLEAPVSGNQQLSNDGMLV-ILAAGDRGLYEDCSSCFQAMGKTSFFLGE 192 (316)
T ss_dssp CCHHH----------HHHHHHHHHHT--TCEEEECCEESCHHHHHHTCEE-EEEEECHHHHHHTHHHHHHHEEEEEECSS
T ss_pred CCHHH----------HHHHHHHHHHc--CCEEEEcCccCChhHHhhCCEE-EEeCCCHHHHHHHHHHHHHhcCCEEEeCC
Confidence 53221 12233333211 12334445442 223344322 23455677888999999999999988877
Q ss_pred hHHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhhccC-hhhhhhhhccccchhHHHHHHhc
Q 012547 277 LVTHEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP-LLADTYVTLLKGRNAWYGQELAK 355 (461)
Q Consensus 277 i~gve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g~-glgDl~~T~~~sRN~~~G~~l~~ 355 (461)
+....|.+.+.|.+ + ..+...+.|+..+++++|.+++++.+. ..++.-.. ..+++. ...+.+
T Consensus 193 ~~~~~~~K~~~n~~---~-----------~~~~~~~~Ea~~la~~~G~~~~~~~~~~~~~~~~s~--~~~~~~-~~~l~~ 255 (316)
T 2uyy_A 193 VGNAAKMMLIVNMV---Q-----------GSFMATIAEGLTLAQVTGQSQQTLLDILNQGQLASI--FLDQKC-QNILQG 255 (316)
T ss_dssp TTHHHHHHHHHHHH---H-----------HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHSTTCCH--HHHHHH-HHHHHT
T ss_pred CCHHHHHHHHHHHH---H-----------HHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCH--HHHHhh-HHhhcC
Confidence 65555655554442 1 124568899999999999998876543 21110000 000110 011111
Q ss_pred CCChhhHhhhhcCCCccch-HHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhc
Q 012547 356 GRLTLDLGDSIKGKGMIQG-ISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIM 419 (461)
Q Consensus 356 g~~~~~~~~~~~~~~~vEG-~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~il~~ 419 (461)
....+.++|. ....+.++++++++|+ + +|+++++|+++..
T Consensus 256 ---------~~~~g~~~~~~~kd~~~~~~~a~~~gv--------------~-~p~~~~v~~~~~~ 296 (316)
T 2uyy_A 256 ---------NFKPDFYLKYIQKDLRLAIALGDAVNH--------------P-TPMAAAANEVYKR 296 (316)
T ss_dssp ---------CCCCSSBHHHHHHHHHHHHHHHHHTTC--------------C-CHHHHHHHHHHHH
T ss_pred ---------CCCCCCcHHHHHHHHHHHHHHHHHhCC--------------C-ChHHHHHHHHHHH
Confidence 1111223443 5556789999999995 6 8999999998863
No 27
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.78 E-value=5.4e-18 Score=168.59 Aligned_cols=263 Identities=11% Similarity=0.033 Sum_probs=170.2
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
++|||+|||+|+||+++|..|+++ | ++|++|+|++++++.+.+. +
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~-G-----~~V~~~dr~~~~~~~~~~~------------------------g----- 50 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRA-G-----LSTWGADLNPQACANLLAE------------------------G----- 50 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHHT------------------------T-----
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC-C-----CeEEEEECCHHHHHHHHHc------------------------C-----
Confidence 458999999999999999999999 8 9999999998766532110 0
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCc-hhHHHHH---HHHHHHhhccCCCCEEEEEe
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-TETKEVF---EEISRYWKERITVPVIISLA 197 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps-~~~~~vl---~~i~~~l~~~~~~~iIIs~t 197 (461)
...++++++++++++|+||+|||+ ..++.++ +++.+.+++ +++||.++
T Consensus 51 -------------------------~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~---g~ivv~~s 102 (303)
T 3g0o_A 51 -------------------------ACGAAASAREFAGVVDALVILVVNAAQVRQVLFGEDGVAHLMKP---GSAVMVSS 102 (303)
T ss_dssp -------------------------CSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--CCCGGGSCT---TCEEEECS
T ss_pred -------------------------CccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChhhHHhhCCC---CCEEEecC
Confidence 012256777888999999999998 4788888 788888876 67888776
Q ss_pred ecCccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEeCChhHHHHHHHHhcCCCceEEecCC-
Q 012547 198 KGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGD- 276 (461)
Q Consensus 198 kGi~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~v~~s~D- 276 (461)
+. .+.. ...+.+.+.+ .|.......+..+|..+. .+.. .++++++++..+.++++|+..+.+++...+
T Consensus 103 t~-~~~~-----~~~~~~~~~~-~g~~~~~~pv~g~~~~a~---~g~l-~~~~gg~~~~~~~~~~ll~~~g~~~~~~~~~ 171 (303)
T 3g0o_A 103 TI-SSAD-----AQEIAAALTA-LNLNMLDAPVSGGAVKAA---QGEM-TVMASGSEAAFTRLKPVLDAVASNVYRISDT 171 (303)
T ss_dssp CC-CHHH-----HHHHHHHHHT-TTCEEEECCEESCHHHHH---TTCE-EEEEECCHHHHHHHHHHHHHHEEEEEEEESS
T ss_pred CC-CHHH-----HHHHHHHHHH-cCCeEEeCCCCCChhhhh---cCCe-EEEeCCCHHHHHHHHHHHHHHCCCEEECCCC
Confidence 43 3321 1112222222 121000011233444332 3322 234567788889999999988888776666
Q ss_pred hHHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhhccC-hhhhhhhhccccchhHHHHHHhc
Q 012547 277 LVTHEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP-LLADTYVTLLKGRNAWYGQELAK 355 (461)
Q Consensus 277 i~gve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g~-glgDl~~T~~~sRN~~~G~~l~~ 355 (461)
+-..++.+.+-|.+ .+....+++|+..++++.|.+++++.+. +.+ ...+...+|+. ..+.+
T Consensus 172 ~g~a~~~Kl~~N~~--------------~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~--~~~s~~~~~~~--~~~~~ 233 (303)
T 3g0o_A 172 PGAGSTVKIIHQLL--------------AGVHIAAAAEAMALAARAGIPLDVMYDVVTHA--AGNSWMFENRM--QHVVD 233 (303)
T ss_dssp TTHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTS--TTCCHHHHHHH--HHHHT
T ss_pred CcHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc--ccCCHHHHhhh--HHHhc
Confidence 66577777766652 2344568999999999999999887653 221 00011223332 23322
Q ss_pred CCChhhHhhhhcCCCccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHh
Q 012547 356 GRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILI 418 (461)
Q Consensus 356 g~~~~~~~~~~~~~~~vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~il~ 418 (461)
+.-. .+-..-......+.+.+++++.|+ + +|+++.+++++.
T Consensus 234 ~~~~-------~~~~~~~~~kD~~~~~~~a~~~g~--------------~-~p~~~~~~~~~~ 274 (303)
T 3g0o_A 234 GDYT-------PRSAVDIFVKDLGLVADTAKALRF--------------P-LPLASTALNMFT 274 (303)
T ss_dssp TCCC-------CSSBHHHHHHHHHHHHHHHHHTTC--------------C-CHHHHHHHHHHH
T ss_pred CCCC-------CCCchHHHHHHHHHHHHHHHHcCC--------------C-ChHHHHHHHHHH
Confidence 2100 011123566677789999999995 6 899999999885
No 28
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.78 E-value=6.8e-18 Score=168.64 Aligned_cols=266 Identities=13% Similarity=0.085 Sum_probs=176.4
Q ss_pred CCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhh
Q 012547 39 AEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (461)
Q Consensus 39 ~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~ 118 (461)
.+..+|||+|||+|.||+++|..|+++ | ++|++|+|++++++.+.+
T Consensus 17 ~~~~m~~I~iIG~G~mG~~~A~~l~~~-G-----~~V~~~dr~~~~~~~l~~---------------------------- 62 (310)
T 3doj_A 17 RGSHMMEVGFLGLGIMGKAMSMNLLKN-G-----FKVTVWNRTLSKCDELVE---------------------------- 62 (310)
T ss_dssp -CCCSCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSGGGGHHHHH----------------------------
T ss_pred ccccCCEEEEECccHHHHHHHHHHHHC-C-----CeEEEEeCCHHHHHHHHH----------------------------
Confidence 345578999999999999999999999 8 999999999876653110
Q ss_pred hhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCc-hhHHHHH---HHHHHHhhccCCCCEEE
Q 012547 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-TETKEVF---EEISRYWKERITVPVII 194 (461)
Q Consensus 119 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps-~~~~~vl---~~i~~~l~~~~~~~iII 194 (461)
.++..+++++++++++|+||+|||. ..+++++ +++.+.+.+ +++||
T Consensus 63 ---------------------------~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~---g~~vv 112 (310)
T 3doj_A 63 ---------------------------HGASVCESPAEVIKKCKYTIAMLSDPCAALSVVFDKGGVLEQICE---GKGYI 112 (310)
T ss_dssp ---------------------------TTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCT---TCEEE
T ss_pred ---------------------------CCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHhCchhhhhccCC---CCEEE
Confidence 0345668889999999999999996 5888988 788887776 67888
Q ss_pred EEeecCccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEeCChhHHHHHHHHhcCCCceEEec
Q 012547 195 SLAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDN 274 (461)
Q Consensus 195 s~tkGi~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~v~~s 274 (461)
.++ ++.+. +...+.+.+.+ .|.......+..+|..+. .+.. .++++++++..+.++++|+..+.+++..
T Consensus 113 ~~s-t~~~~-----~~~~~~~~~~~-~g~~~v~~pv~g~~~~a~---~g~l-~i~~gg~~~~~~~~~~ll~~~g~~~~~~ 181 (310)
T 3doj_A 113 DMS-TVDAE-----TSLKINEAITG-KGGRFVEGPVSGSKKPAE---DGQL-IILAAGDKALFEESIPAFDVLGKRSFYL 181 (310)
T ss_dssp ECS-CCCHH-----HHHHHHHHHHH-TTCEEEECCEECCHHHHH---HTCE-EEEEEECHHHHHHHHHHHHHHEEEEEEC
T ss_pred ECC-CCCHH-----HHHHHHHHHHH-cCCEEEeCCCCCChhHHh---cCCe-EEEEcCCHHHHHHHHHHHHHhCCCEEEe
Confidence 766 44443 12222333332 121100111334444433 3332 2345667888899999999888888888
Q ss_pred CChHHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhhccC-hhhhhhhhccccchhHHHHHH
Q 012547 275 GDLVTHEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP-LLADTYVTLLKGRNAWYGQEL 353 (461)
Q Consensus 275 ~Di~gve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g~-glgDl~~T~~~sRN~~~G~~l 353 (461)
.++-..++.+.+-|.+ ......+++|+..++++.|.+++++.+. +.+.. .+...+| .|..+
T Consensus 182 g~~g~a~~~Kl~~N~~--------------~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~--~s~~~~~--~~~~~ 243 (310)
T 3doj_A 182 GQVGNGAKMKLIVNMI--------------MGSMMNAFSEGLVLADKSGLSSDTLLDILDLGAM--TNPMFKG--KGPSM 243 (310)
T ss_dssp SSTTHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHSTT--CCHHHHH--HHHHH
T ss_pred CCcCHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhccc--ccHHHHH--Hhhhh
Confidence 7765567777666652 2334467899999999999999887653 22100 0001122 23334
Q ss_pred hcCCChhhHhhhhcCCCccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhc
Q 012547 354 AKGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIM 419 (461)
Q Consensus 354 ~~g~~~~~~~~~~~~~~~vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~il~~ 419 (461)
.++.-. .+-..-.+....+.+.+++++.|+ + +|+++.+++++..
T Consensus 244 ~~~~~~-------~~f~~~~~~KDl~~~~~~a~~~g~--------------~-~p~~~~~~~~~~~ 287 (310)
T 3doj_A 244 NKSSYP-------PAFPLKHQQKDMRLALALGDENAV--------------S-MPVAAAANEAFKK 287 (310)
T ss_dssp HTTCCC-------CSSBHHHHHHHHHHHHHHHHHTTC--------------C-CHHHHHHHHHHHH
T ss_pred hcCCCC-------CCccHHHHHHHHHHHHHHHHHcCC--------------C-ChHHHHHHHHHHH
Confidence 332210 011123677788899999999995 6 8999999988753
No 29
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.78 E-value=3.3e-18 Score=181.13 Aligned_cols=282 Identities=12% Similarity=0.061 Sum_probs=179.7
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhccC
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (461)
|||+|||+|+||+++|..|+++ | ++|.+|+|++++++.+.++ .+ +. +. +
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~-G-----~~V~v~dr~~~~~~~l~~~--------~g--------~~---~~-----~- 50 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEK-G-----FKVAVFNRTYSKSEEFMKA--------NA--------SA---PF-----A- 50 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSHHHHHHHHHH--------TT--------TS---TT-----G-
T ss_pred CEEEEEChHHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHHHh--------cC--------CC---CC-----C-
Confidence 7999999999999999999999 8 8999999998877653211 00 00 10 0
Q ss_pred CccchhhhhhhcccccCCCCCCCCeEEecCHHHHhc---CCCEEEEcCCc-hhHHHHHHHHHHHhhccCCCCEEEEEeec
Q 012547 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW---DADIVINGLPS-TETKEVFEEISRYWKERITVPVIISLAKG 199 (461)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~---~aDiIIiaVps-~~~~~vl~~i~~~l~~~~~~~iIIs~tkG 199 (461)
.++..++|+++++. ++|+||+|||+ +.++++++++.+++++ +++||++++|
T Consensus 51 ----------------------~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~vl~~l~~~l~~---g~iIId~sng 105 (478)
T 1pgj_A 51 ----------------------GNLKAFETMEAFAASLKKPRKALILVQAGAATDSTIEQLKKVFEK---GDILVDTGNA 105 (478)
T ss_dssp ----------------------GGEEECSCHHHHHHHBCSSCEEEECCCCSHHHHHHHHHHHHHCCT---TCEEEECCCC
T ss_pred ----------------------CCeEEECCHHHHHhcccCCCEEEEecCChHHHHHHHHHHHhhCCC---CCEEEECCCC
Confidence 03566788888776 49999999999 4899999999999887 6899999999
Q ss_pred CccccccccccCCHHHHHHhHhCCCCCc---EEEEeCcchhHhhhccCceEEEEeCChhHHHHHHHHhcCCCce------
Q 012547 200 VEAELEAVPRIITPTQMINRATGVPIEN---ILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFT------ 270 (461)
Q Consensus 200 i~~~~~~~~~~~~~se~i~~~lg~~~~~---v~vlsGPn~a~ev~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~------ 270 (461)
..... +.+.+.+...... ..+..||..+ ..|. + ++++++++..+.++++|+..+.+
T Consensus 106 ~~~~~----------~~l~~~l~~~g~~~v~~pv~gg~~~a---~~g~-~-i~~gg~~~~~~~v~~ll~~~g~~~~dg~~ 170 (478)
T 1pgj_A 106 HFKDQ----------GRRAQQLEAAGLRFLGMGISGGEEGA---RKGP-A-FFPGGTLSVWEEIRPIVEAAAAKADDGRP 170 (478)
T ss_dssp CHHHH----------HHHHHHHHTTTCEEEEEEEESHHHHH---HHCC-E-EEEEECHHHHHHHHHHHHHHSCBCTTSCB
T ss_pred ChHHH----------HHHHHHHHHCCCeEEEeeccCCHHHH---hcCC-e-EeccCCHHHHHHHHHHHHHhcccccCCCe
Confidence 76541 2233333211111 1233334322 2333 3 34566777788899998876654
Q ss_pred -EEecCChHHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhhccC-h----hhhhhhhcccc
Q 012547 271 -VWDNGDLVTHEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP-L----LADTYVTLLKG 344 (461)
Q Consensus 271 -v~~s~Di~gve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g~-g----lgDl~~T~~~s 344 (461)
+....+.--..+.+.. .|....++.+++.|+..+++++|.+++++.+. . -|++ +....
T Consensus 171 ~v~~~g~~G~g~~~Kl~--------------~N~~~~~~~~~i~Ea~~l~~~~G~~~~~~~~l~~~w~~~g~~--~s~l~ 234 (478)
T 1pgj_A 171 CVTMNGSGGAGSCVKMY--------------HNSGEYAILQIWGEVFDILRAMGLNNDEVAAVLEDWKSKNFL--KSYML 234 (478)
T ss_dssp SCCCCCSTTHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSTT--CBHHH
T ss_pred eEEEeCCchHHHHHhhH--------------HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhccCCCc--CchHH
Confidence 2222221111222222 24344567789999999999999998876553 2 1211 11122
Q ss_pred chhHHHHHHh----cCCC-hhhHhhhhcCCCccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHH-HH-HHH
Q 012547 345 RNAWYGQELA----KGRL-TLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKM-LY-KIL 417 (461)
Q Consensus 345 RN~~~G~~l~----~g~~-~~~~~~~~~~~~~vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~-ly-~il 417 (461)
+++. ..+. .|.. .+.+.+.. + ..| |.+.++++++++|+ + +|+++. || +++
T Consensus 235 ~~~~--~~l~~~d~~G~~~ld~i~D~~--~--~kg--tg~~~~~~A~~~Gv--------------~-~Pi~~~av~~r~l 291 (478)
T 1pgj_A 235 DISI--AAARAKDKDGSYLTEHVMDRI--G--SKG--TGLWSAQEALEIGV--------------P-APSLNMAVVSRQF 291 (478)
T ss_dssp HHHH--HHHHCBCTTSSBGGGGBCCCC--C--CCS--HHHHHHHHHHHHTC--------------C-CHHHHHHHHHHHH
T ss_pred Hhhc--hhhhcCCCCChhHHHHHHHHh--c--Ccc--HHHHHHHHHHHhCC--------------C-ChHHHHHHHHHHH
Confidence 3322 1232 2321 21121111 0 112 45789999999995 7 899998 77 899
Q ss_pred hcCCCHHHHHHHHHhccc
Q 012547 418 IMRESPIQAILEALRDET 435 (461)
Q Consensus 418 ~~~~~~~~~~~~~l~~~~ 435 (461)
+..+++.+++.++|..+.
T Consensus 292 s~~~~~r~~~~~~l~~~~ 309 (478)
T 1pgj_A 292 TMYKTERQANASNAPGIT 309 (478)
T ss_dssp HHTHHHHHHHHHHSTTTT
T ss_pred hCCCCHHHHHHHhcCCCC
Confidence 999999999999887553
No 30
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.78 E-value=1.5e-18 Score=183.81 Aligned_cols=281 Identities=14% Similarity=0.034 Sum_probs=182.4
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
+++|+|||+|+||++||..|+++ | ++|++|+|++++++.+.++ .++
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~-G-----~~V~v~~r~~~~~~~l~~~----------------------~~~------ 60 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESR-G-----YTVSIFNRSREKTEEVIAE----------------------NPG------ 60 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTT-T-----CCEEEECSSHHHHHHHHHH----------------------STT------
T ss_pred CCeEEEEccHHHHHHHHHHHHhC-C-----CeEEEEeCCHHHHHHHHhh----------------------CCC------
Confidence 36899999999999999999999 8 8999999998876642210 000
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcC---CCEEEEcCCc-hhHHHHHHHHHHHhhccCCCCEEEEEee
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD---ADIVINGLPS-TETKEVFEEISRYWKERITVPVIISLAK 198 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~---aDiIIiaVps-~~~~~vl~~i~~~l~~~~~~~iIIs~tk 198 (461)
.++..++|+++++++ +|+||++||+ +.++++++++.+++++ +++||++++
T Consensus 61 -----------------------~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~vl~~l~~~l~~---g~iIId~s~ 114 (480)
T 2zyd_A 61 -----------------------KKLVPYYTVKEFVESLETPRRILLMVKAGAGTDAAIDSLKPYLDK---GDIIIDGGN 114 (480)
T ss_dssp -----------------------SCEEECSSHHHHHHTBCSSCEEEECSCSSSHHHHHHHHHGGGCCT---TCEEEECSC
T ss_pred -----------------------CCeEEeCCHHHHHhCCCCCCEEEEECCCHHHHHHHHHHHHhhcCC---CCEEEECCC
Confidence 035667888888876 9999999999 6899999999999887 689999999
Q ss_pred cCccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEeCChhHHHHHHHHhcCCCce-------E
Q 012547 199 GVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFT-------V 271 (461)
Q Consensus 199 Gi~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~-------v 271 (461)
|..... ..+.+.+.+ .+.......+..||..+. .|. .++++++++..+.++++|+..+.+ +
T Consensus 115 g~~~~t------~~l~~~l~~-~g~~~v~~pv~gg~~~a~---~g~--~i~~gg~~~~~~~v~~ll~~~g~~~~dGe~~v 182 (480)
T 2zyd_A 115 TFFQDT------IRRNRELSA-EGFNFIGTGVSGGEEGAL---KGP--SIMPGGQKEAYELVAPILTKIAAVAEDGEPCV 182 (480)
T ss_dssp CCHHHH------HHHHHHHHH-TTCEEEEEEEESHHHHHH---HCC--EEEEESCHHHHHHHHHHHHHHSCBCTTSCBSB
T ss_pred CCHHHH------HHHHHHHHH-CCCCeeCCccccCHhHHh---cCC--eEEecCCHHHHHHHHHHHHHHhccccCCCceE
Confidence 986542 112333333 121111122333444432 343 345677788889999999866554 2
Q ss_pred EecCChHHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHH-hCCCchhhccC------h-hhhhhhhcc-
Q 012547 272 WDNGDLVTHEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHL-LAEEPEKLAGP------L-LADTYVTLL- 342 (461)
Q Consensus 272 ~~s~Di~gve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a-~G~~~~t~~g~------g-lgDl~~T~~- 342 (461)
....+.--..+.+ ++ .|.....+.+++.|+..++++ +|.+++++.++ | ++|+..+|.
T Consensus 183 ~~~g~~G~g~~~K-----------l~---~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~l~~~w~~g~~~s~l~~~~~ 248 (480)
T 2zyd_A 183 TYIGADGAGHYVK-----------MV---HNGIEYGDMQLIAEAYSLLKGGLNLTNEELAQTFTEWNNGELSSYLIDITK 248 (480)
T ss_dssp CCCBSTTHHHHHH-----------HH---HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTTTCBHHHHHHH
T ss_pred EEECCccHHHHHH-----------HH---HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhcCCCcccHHHHHHH
Confidence 2222211112222 22 354556777899999999999 79999887663 4 777888874
Q ss_pred -ccchhHHHHHHhcCCChhhHhhhhcCCCccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHH--HHHHhc
Q 012547 343 -KGRNAWYGQELAKGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKML--YKILIM 419 (461)
Q Consensus 343 -~sRN~~~G~~l~~g~~~~~~~~~~~~~~~vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~l--y~il~~ 419 (461)
..||+.+ ..|...+.+.+.. .+..+| +.+++.++++|+ + +|+++.. ++++..
T Consensus 249 ~~l~~~d~----~~~~~v~~i~D~~--~~k~tG----~~~~~~A~~~gv--------------~-~Pi~~~av~ar~~s~ 303 (480)
T 2zyd_A 249 DIFTKKDE----DGNYLVDVILDEA--ANKGTG----KWTSQSALDLGE--------------P-LSLITESVFARYISS 303 (480)
T ss_dssp HHHHCBCT----TSSBGGGGBCCCC--CCCSCT----THHHHHHHHHTC--------------C-CHHHHHHHHHHHHHT
T ss_pred HHHhcCCC----CCcchHHHHHHHh--cCchHH----HHHHHHHHHcCC--------------C-CchHHHHHHHHhhhc
Confidence 3344443 2233333232211 123345 357788999995 7 8999984 677777
Q ss_pred CCCHHHHHHHHHhcc
Q 012547 420 RESPIQAILEALRDE 434 (461)
Q Consensus 420 ~~~~~~~~~~~l~~~ 434 (461)
.++......+++..+
T Consensus 304 ~k~~R~~~~~~~~g~ 318 (480)
T 2zyd_A 304 LKDQRVAASKVLSGP 318 (480)
T ss_dssp CHHHHHHHHTTCCCC
T ss_pred chhhhHHhhcccCCC
Confidence 665555544455444
No 31
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.78 E-value=4.4e-18 Score=170.85 Aligned_cols=275 Identities=13% Similarity=0.119 Sum_probs=166.1
Q ss_pred chhHHhhHHHHHhhcC-CCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhh
Q 012547 23 GSLEERLDELRRLMGK-AEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSRE 101 (461)
Q Consensus 23 ~~~~~~~~~~~~~~~~-~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~ 101 (461)
+....+-.-+.+.+.. ...++|||+|||+|.||+++|..|++. | ++|++|+|++++++.+.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~I~iIG~G~mG~~~a~~l~~~-G-----~~V~~~dr~~~~~~~l~~----------- 72 (320)
T 4dll_A 10 GVDLGTENLYFQSMTVESDPYARKITFLGTGSMGLPMARRLCEA-G-----YALQVWNRTPARAASLAA----------- 72 (320)
T ss_dssp -------------------CCCSEEEEECCTTTHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHT-----------
T ss_pred cccccccccceechhhccccCCCEEEEECccHHHHHHHHHHHhC-C-----CeEEEEcCCHHHHHHHHH-----------
Confidence 4445544444444432 344568999999999999999999999 8 999999999876543110
Q ss_pred hhHHhhhhcccccchhhhhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCc-hhHHHHHH--
Q 012547 102 DVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-TETKEVFE-- 178 (461)
Q Consensus 102 ~~~~~~~~n~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps-~~~~~vl~-- 178 (461)
.++..+++++++++++|+||+|||. ..+++++.
T Consensus 73 --------------------------------------------~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~ 108 (320)
T 4dll_A 73 --------------------------------------------LGATIHEQARAAARDADIVVSMLENGAVVQDVLFAQ 108 (320)
T ss_dssp --------------------------------------------TTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTTT
T ss_pred --------------------------------------------CCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcch
Confidence 0345678899999999999999995 68888887
Q ss_pred HHHHHhhccCCCCEEEEEeecCccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhh--ccCceEEEEeCChhH
Q 012547 179 EISRYWKERITVPVIISLAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIY--NKEYANARICGAEKW 256 (461)
Q Consensus 179 ~i~~~l~~~~~~~iIIs~tkGi~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~--~g~~~~~~~~~~~~~ 256 (461)
.+.+.+.+ +++||.++.+ .+. +...+.+.+.+ .+ +.++..|-+..+.. .+.. .++++++++.
T Consensus 109 ~~~~~l~~---~~~vi~~st~-~~~-----~~~~~~~~~~~-~g-----~~~~~~pv~g~~~~a~~g~l-~i~~gg~~~~ 172 (320)
T 4dll_A 109 GVAAAMKP---GSLFLDMASI-TPR-----EARDHAARLGA-LG-----IAHLDTPVSGGTVGAEQGTL-VIMAGGKPAD 172 (320)
T ss_dssp CHHHHCCT---TCEEEECSCC-CHH-----HHHHHHHHHHH-TT-----CEEEECCEECHHHHHHHTCE-EEEEESCHHH
T ss_pred hHHhhCCC---CCEEEecCCC-CHH-----HHHHHHHHHHH-cC-----CEEEeCCCcCCHhHHhcCCe-eEEeCCCHHH
Confidence 78887776 6788877644 332 11222232322 12 12333343322211 3332 2346778888
Q ss_pred HHHHHHHhcCCCceEEecCChHHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhhccC---h
Q 012547 257 RKPLAKFLRRPHFTVWDNGDLVTHEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP---L 333 (461)
Q Consensus 257 ~~~l~~ll~~~g~~v~~s~Di~gve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g~---g 333 (461)
.+.++++|+.. .+++...+.-..++.+.+-|. .......+++|+..++++.|.+++++.+. +
T Consensus 173 ~~~~~~ll~~~-~~~~~~g~~g~a~~~Kl~~N~--------------~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~ 237 (320)
T 4dll_A 173 FERSLPLLKVF-GRATHVGPHGSGQLTKLANQM--------------IVGITIGAVAEALLFATKGGADMAKVKEAITGG 237 (320)
T ss_dssp HHHHHHHHHHH-EEEEEEESTTHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHTSCCHHHHHHHHTTS
T ss_pred HHHHHHHHHhc-CCEEEeCCccHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcc
Confidence 88899998877 677766665445666655554 22344568999999999999999887642 1
Q ss_pred hhhhhhhccccchhHHHHHHhcCCChhhHhhhhcCC-CccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHH
Q 012547 334 LADTYVTLLKGRNAWYGQELAKGRLTLDLGDSIKGK-GMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKM 412 (461)
Q Consensus 334 lgDl~~T~~~sRN~~~G~~l~~g~~~~~~~~~~~~~-~~vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ 412 (461)
.++... .++ .+..+-++. +..+ ..--.....+.+.+++++.|+ + +|+++.
T Consensus 238 ~~~s~~----~~~--~~~~~l~~~--------~~~gf~~~~~~KDl~~~~~~a~~~g~--------------~-~p~~~~ 288 (320)
T 4dll_A 238 FADSRV----LQL--HGQRMVERD--------FAPRARLSIQLKDMRNALATAQEIGF--------------D-APITGL 288 (320)
T ss_dssp TTCBHH----HHT--HHHHHHTTC--------CCCSSBHHHHHHHHHHHHHHHHHTTC--------------C-CHHHHH
T ss_pred cccCHH----HHH--hhhhhccCC--------CCCcccHHHHHHHHHHHHHHHHHcCC--------------C-ChHHHH
Confidence 111110 011 111221111 0000 012334556689999999995 6 899999
Q ss_pred HHHHHh
Q 012547 413 LYKILI 418 (461)
Q Consensus 413 ly~il~ 418 (461)
+.+++.
T Consensus 289 ~~~~~~ 294 (320)
T 4dll_A 289 FEQLYA 294 (320)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888775
No 32
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.77 E-value=8.4e-18 Score=165.63 Aligned_cols=252 Identities=14% Similarity=0.069 Sum_probs=162.3
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhccC
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (461)
|||+|||+|+||+++|..|++. | ++|++|+|++++++.+. +
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~-g-----~~V~~~~~~~~~~~~~~---------~------------------------ 41 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKH-G-----YPLIIYDVFPDACKEFQ---------D------------------------ 41 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHT-T-----CCEEEECSSTHHHHHHH---------T------------------------
T ss_pred CeEEEEeccHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHH---------H------------------------
Confidence 6899999999999999999998 8 89999999987654311 0
Q ss_pred CccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCC-chhHHHHHHHHH---HHhhccCCCCEEEEEeec
Q 012547 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLP-STETKEVFEEIS---RYWKERITVPVIISLAKG 199 (461)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVp-s~~~~~vl~~i~---~~l~~~~~~~iIIs~tkG 199 (461)
.++..+++++++++++|+||+||| ++.++.++.++. +++++ ++++|+ ++|
T Consensus 42 ----------------------~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~~~~l~~---~~~vv~-~s~ 95 (296)
T 2gf2_A 42 ----------------------AGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGILKKVKK---GSLLID-SST 95 (296)
T ss_dssp ----------------------TTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSGGGTCCT---TCEEEE-CSC
T ss_pred ----------------------cCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhHHhcCCC---CCEEEE-CCC
Confidence 024456778888889999999995 678899888753 34555 678888 788
Q ss_pred CccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEeCChhHHHHHHHHhcCCCceEEecCChHH
Q 012547 200 VEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVT 279 (461)
Q Consensus 200 i~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~v~~s~Di~g 279 (461)
+.+.. ...+.+.+.+. +.......+..||..+. .+.. .+..+++++..+.++++|+..|++++...+.-.
T Consensus 96 ~~~~~-----~~~~~~~~~~~-g~~~~~~p~~~g~~~a~---~~~~-~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~~g~ 165 (296)
T 2gf2_A 96 IDPAV-----SKELAKEVEKM-GAVFMDAPVSGGVGAAR---SGNL-TFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGT 165 (296)
T ss_dssp CCHHH-----HHHHHHHHHHT-TCEEEECCEESHHHHHH---HTCE-EEEEESCGGGHHHHHHHHTTTEEEEEEEESTTH
T ss_pred CCHHH-----HHHHHHHHHHc-CCEEEEcCCCCChhHHh---cCcE-EEEeCCCHHHHHHHHHHHHHHcCCeEEeCCccH
Confidence 87752 11222223221 21000001233343222 2322 234567788899999999999998876555221
Q ss_pred HHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhhccC-hhhh---hhhhcc-----------cc
Q 012547 280 HEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP-LLAD---TYVTLL-----------KG 344 (461)
Q Consensus 280 ve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g~-glgD---l~~T~~-----------~s 344 (461)
..+.+..- |....++..++.|+..+++++|.+++++.++ ..++ ..+++. .+
T Consensus 166 ~~~~kl~~--------------n~~~~~~~~~~~Ea~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~ 231 (296)
T 2gf2_A 166 GQAAKICN--------------NMLLAISMIGTAEAMNLGIRLGLDPKLLAKILNMSSGRCWSSDTYNPVPGVMDGVPSA 231 (296)
T ss_dssp HHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCBHHHHHSCSSTTTCSSSGGG
T ss_pred HHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhCcccCHHHHhcCCcccccccchhc
Confidence 22332222 3333556678999999999999998877553 2121 112210 11
Q ss_pred chhHHHHHHhcCCChhhHhhhhcCCCccc-hHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHh
Q 012547 345 RNAWYGQELAKGRLTLDLGDSIKGKGMIQ-GISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILI 418 (461)
Q Consensus 345 RN~~~G~~l~~g~~~~~~~~~~~~~~~vE-G~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~il~ 418 (461)
|++.. +-.++ ....++.++++++++|+ + +|+++++|+++.
T Consensus 232 ~~~~~-------------------g~~~~~~~kd~~~~~~~a~~~gv--------------~-~p~~~~~~~~~~ 272 (296)
T 2gf2_A 232 NNYQG-------------------GFGTTLMAKDLGLAQDSATSTKS--------------P-ILLGSLAHQIYR 272 (296)
T ss_dssp GTTCS-------------------SSBHHHHHHHHHHHHHHHHHTTC--------------C-CHHHHHHHHHHH
T ss_pred cCCCC-------------------CCchHHHHHHHHHHHHHHHHcCC--------------C-ChHHHHHHHHHH
Confidence 22111 11122 34566789999999995 7 899999999886
No 33
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.76 E-value=1e-17 Score=166.01 Aligned_cols=263 Identities=14% Similarity=0.098 Sum_probs=168.1
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
++|||+|||+|+||+++|..|+++ | ++|++|+|++++++.+.+
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~~-G-----~~V~~~d~~~~~~~~~~~------------------------------- 44 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLKA-G-----YLLNVFDLVQSAVDGLVA------------------------------- 44 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHT-T-----CEEEEECSSHHHHHHHHH-------------------------------
T ss_pred CCCEEEEEeecHHHHHHHHHHHhC-C-----CeEEEEcCCHHHHHHHHH-------------------------------
Confidence 468999999999999999999999 8 999999999876553110
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCC-chhHHHHHH---HHHHHhhccCCCCEEEEEe
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLP-STETKEVFE---EISRYWKERITVPVIISLA 197 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVp-s~~~~~vl~---~i~~~l~~~~~~~iIIs~t 197 (461)
.++..+++++++++++|+||+||| +..+++++. ++.+.+.+ +++||+++
T Consensus 45 ------------------------~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~~~~~l~~---~~~vi~~s 97 (302)
T 2h78_A 45 ------------------------AGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAP---GTLVLECS 97 (302)
T ss_dssp ------------------------TTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSCGGGSSCS---SCEEEECS
T ss_pred ------------------------CCCeEcCCHHHHHhCCCeEEEECCCHHHHHHHHcCchhHHhcCCC---CcEEEECC
Confidence 024566788899999999999998 567899998 88888776 67888776
Q ss_pred ecCccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhh--ccCceEEEEeCChhHHHHHHHHhcCCCceEEecC
Q 012547 198 KGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIY--NKEYANARICGAEKWRKPLAKFLRRPHFTVWDNG 275 (461)
Q Consensus 198 kGi~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~--~g~~~~~~~~~~~~~~~~l~~ll~~~g~~v~~s~ 275 (461)
.+.... ...+.+.+.+ .+. . ++..|....... .+..+ ..++++++..+.++++|+..+.+++...
T Consensus 98 t~~~~~------~~~l~~~~~~-~g~---~--~~~~pv~~~~~~~~~g~l~-~~~~g~~~~~~~~~~ll~~~g~~~~~~~ 164 (302)
T 2h78_A 98 TIAPTS------ARKIHAAARE-RGL---A--MLDAPVSGGTAGAAAGTLT-FMVGGDAEALEKARPLFEAMGRNIFHAG 164 (302)
T ss_dssp CCCHHH------HHHHHHHHHH-TTC---C--EEECCEESCHHHHHHTCEE-EEEESCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred CCCHHH------HHHHHHHHHH-cCC---E--EEEEEccCChhhHhcCCce-EEeCCCHHHHHHHHHHHHHhCCCeEEcC
Confidence 433221 1112222222 121 2 223354433222 23222 2456778888999999999898888777
Q ss_pred ChHHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhhccChhhhhhhhccccchhHHHHHHhc
Q 012547 276 DLVTHEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQELAK 355 (461)
Q Consensus 276 Di~gve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g~glgDl~~T~~~sRN~~~G~~l~~ 355 (461)
+....+|.+.+-|.+. ..+..+++|+..++++.|.+++++... +... ..+++.+. ....
T Consensus 165 ~~~~~~~~Kl~~n~~~--------------~~~~~~~~Ea~~l~~~~G~~~~~~~~~-----~~~~-~~~s~~~~-~~~~ 223 (302)
T 2h78_A 165 PDGAGQVAKVCNNQLL--------------AVLMIGTAEAMALGVANGLEAKVLAEI-----MRRS-SGGNWALE-VYNP 223 (302)
T ss_dssp STTHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHTTCCHHHHHHH-----HHTS-TTCCHHHH-HCCC
T ss_pred CccHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHcCCCHHHHHHH-----HHcC-CCCCHHHH-HhCC
Confidence 7666678777777621 234468899999999999998876432 2111 11111111 1111
Q ss_pred C----C-ChhhHhhhhcCCCcc-chHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhc
Q 012547 356 G----R-LTLDLGDSIKGKGMI-QGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIM 419 (461)
Q Consensus 356 g----~-~~~~~~~~~~~~~~v-EG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~il~~ 419 (461)
+ . .. ....+..+-.+ -.....+.+.++++++|+ + +|+++.+++++..
T Consensus 224 ~~g~~~~~~--~~~~~~~g~~~~~~~kD~~~~~~~a~~~g~--------------~-~p~~~~~~~~~~~ 276 (302)
T 2h78_A 224 WPGVMENAP--ASRDYSGGFMAQLMAKDLGLAQEAAQASAS--------------S-TPMGSLALSLYRL 276 (302)
T ss_dssp STTTSTTSG--GGGTTCSSSBHHHHHHHHHHHHHHHHHHTC--------------C-CHHHHHHHHHHHH
T ss_pred Ccccccccc--cCCCCCCCCcHHHHHHHHHHHHHHHHHcCC--------------C-ChHHHHHHHHHHH
Confidence 0 0 00 00011111111 223445689999999995 6 8999999988753
No 34
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.76 E-value=8.7e-18 Score=166.79 Aligned_cols=263 Identities=12% Similarity=0.065 Sum_probs=167.5
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
+|||+|||+|.||+++|..|+++ | ++|++|+|++++++.+.+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~-G-----~~V~~~dr~~~~~~~~~~-------------------------------- 56 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW-P-----GGVTVYDIRIEAMTPLAE-------------------------------- 56 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS-T-----TCEEEECSSTTTSHHHHH--------------------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHHC-C-----CeEEEEeCCHHHHHHHHH--------------------------------
Confidence 47999999999999999999999 8 999999999876653110
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCc-hhHHHHHHHHHHHhhccCCCCEEEEEeecCc
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-TETKEVFEEISRYWKERITVPVIISLAKGVE 201 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps-~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~ 201 (461)
.++..++|++++++ +|+||+|||. ..++++++++.+.+++ +++||.++.+ .
T Consensus 57 -----------------------~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~~~l~~~l~~---g~ivv~~st~-~ 108 (296)
T 3qha_A 57 -----------------------AGATLADSVADVAA-ADLIHITVLDDAQVREVVGELAGHAKP---GTVIAIHSTI-S 108 (296)
T ss_dssp -----------------------TTCEECSSHHHHTT-SSEEEECCSSHHHHHHHHHHHHTTCCT---TCEEEECSCC-C
T ss_pred -----------------------CCCEEcCCHHHHHh-CCEEEEECCChHHHHHHHHHHHHhcCC---CCEEEEeCCC-C
Confidence 03456788999888 9999999995 6899999999988876 6788776643 3
Q ss_pred cccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEeCChhHHHHHHHHhcCCCceEEecCChHHHH
Q 012547 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVTHE 281 (461)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~v~~s~Di~gve 281 (461)
+. +...+.+.+.+. +.......+..+|..+. .+.. .++++++++..+.++++|+..+.+++...+.-..+
T Consensus 109 ~~-----~~~~~~~~~~~~-g~~~~~~pv~g~~~~a~---~g~l-~~~~gg~~~~~~~~~~ll~~~g~~~~~~g~~g~a~ 178 (296)
T 3qha_A 109 DT-----TAVELARDLKAR-DIHIVDAPVSGGAAAAA---RGEL-ATMVGADREVYERIKPAFKHWAAVVIHAGEPGAGT 178 (296)
T ss_dssp HH-----HHHHHHHHHGGG-TCEEEECCEESCHHHHH---HTCE-EEEEECCHHHHHHHHHHHHHHEEEEEEEESTTHHH
T ss_pred HH-----HHHHHHHHHHHc-CCEEEeCCCcCCHHHHh---cCCc-cEEecCCHHHHHHHHHHHHHHcCCeEEcCChhHHH
Confidence 32 111222222221 21000011233344333 3332 23457778888999999998888887777755566
Q ss_pred HHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhhccC-hhhhhhhhcc----ccchhHHHHHHhcC
Q 012547 282 VMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP-LLADTYVTLL----KGRNAWYGQELAKG 356 (461)
Q Consensus 282 ~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g~-glgDl~~T~~----~sRN~~~G~~l~~g 356 (461)
+.+.+-|. .......+++|+..+++++|.+++++.++ ...|.+..+. ..| +..+.++
T Consensus 179 ~~Kl~~N~--------------~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~~i~~~~~~s~~~~----~~~~~~~ 240 (296)
T 3qha_A 179 RMKLARNM--------------LTFTSYAAACEAMKLAEAAGLDLQALGRVVRHTDALTGGPGAIMVRD----NMKDLEP 240 (296)
T ss_dssp HHHHHHHH--------------HHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCCGGGGCCCS----SCSCCCT
T ss_pred HHHHHHHH--------------HHHHHHHHHHHHHHHHHHcCCCHHHHhhhcchHHHHhcCcccCHHhh----chhhhhc
Confidence 66666655 22445568899999999999999988332 2223222211 111 1111111
Q ss_pred CChh-hHhhhhcCCCc-cchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhc
Q 012547 357 RLTL-DLGDSIKGKGM-IQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIM 419 (461)
Q Consensus 357 ~~~~-~~~~~~~~~~~-vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~il~~ 419 (461)
.... .... .. --.....+.+.+++++.|+ + +|+.+.+++++..
T Consensus 241 ~~~~f~~~~-----~~~~~~~KD~~~~~~~a~~~g~--------------~-~p~~~~~~~~~~~ 285 (296)
T 3qha_A 241 DNFLYQPFL-----HTRGLGEKDLSLALALGEAVSV--------------D-LPLARLAYEGLAA 285 (296)
T ss_dssp TSTTHHHHH-----HHHHHHHHHHHHHHHHHHHTTC--------------C-CHHHHHHHHHHHH
T ss_pred CCCCCchhh-----hhhHHHHHHHHHHHHHHHHcCC--------------C-ChHHHHHHHHHHH
Confidence 0000 0000 00 0123345678899999995 6 8999999998754
No 35
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.76 E-value=1.2e-17 Score=164.97 Aligned_cols=252 Identities=13% Similarity=0.109 Sum_probs=166.8
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
++|||+|||+|.||+++|..|++. | ++|++|+|++++++.+. +
T Consensus 3 ~~~~i~iiG~G~~G~~~a~~l~~~-g-----~~V~~~~~~~~~~~~~~---------~---------------------- 45 (301)
T 3cky_A 3 KSIKIGFIGLGAMGKPMAINLLKE-G-----VTVYAFDLMEANVAAVV---------A---------------------- 45 (301)
T ss_dssp -CCEEEEECCCTTHHHHHHHHHHT-T-----CEEEEECSSHHHHHHHH---------T----------------------
T ss_pred CCCEEEEECccHHHHHHHHHHHHC-C-----CeEEEEeCCHHHHHHHH---------H----------------------
Confidence 458999999999999999999998 8 89999999986554311 0
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCC-chhHHHHHH---HHHHHhhccCCCCEEEEEe
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLP-STETKEVFE---EISRYWKERITVPVIISLA 197 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVp-s~~~~~vl~---~i~~~l~~~~~~~iIIs~t 197 (461)
.++...+++++++.++|+||+||| +..++.++. ++.+.+++ +++||+++
T Consensus 46 ------------------------~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~---~~~vv~~~ 98 (301)
T 3cky_A 46 ------------------------QGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGGVLSACKA---GTVIVDMS 98 (301)
T ss_dssp ------------------------TTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHSCT---TCEEEECC
T ss_pred ------------------------CCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcchHhhcCCC---CCEEEECC
Confidence 023455678888889999999997 567888885 78888876 78999999
Q ss_pred ecCccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhh--hccCceEEEEeCChhHHHHHHHHhcCCCceEEecC
Q 012547 198 KGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEI--YNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNG 275 (461)
Q Consensus 198 kGi~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev--~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~v~~s~ 275 (461)
+|..... +.+.+.++..... ++..|....+. ..+..+ .+++++++..+.++++|+..|++++...
T Consensus 99 ~~~~~~~----------~~l~~~~~~~g~~--~~~~p~~~~~~~a~~g~~~-~~~~g~~~~~~~v~~ll~~~g~~~~~~~ 165 (301)
T 3cky_A 99 SVSPSST----------LKMAKVAAEKGID--YVDAPVSGGTKGAEAGTLT-IMVGASEAVFEKIQPVLSVIGKDIYHVG 165 (301)
T ss_dssp CCCHHHH----------HHHHHHHHHTTCE--EEECCEESHHHHHHHTCEE-EEEESCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred CCCHHHH----------HHHHHHHHHcCCe--EEEccCCCCHHHHHcCCeE-EEECCCHHHHHHHHHHHHHhcCCEEEeC
Confidence 8874221 2233333211111 22334322211 123322 2355677888999999999999888776
Q ss_pred ChHHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhhccC-h---hhh--hhhhc---cccch
Q 012547 276 DLVTHEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP-L---LAD--TYVTL---LKGRN 346 (461)
Q Consensus 276 Di~gve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g~-g---lgD--l~~T~---~~sRN 346 (461)
+.-...|.+.+-|. ....+..++.|+..++++.|.+++++... . .++ +..++ ..+||
T Consensus 166 ~~g~~~~~Kl~~N~--------------~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 231 (301)
T 3cky_A 166 DTGAGDAVKIVNNL--------------LLGCNMASLAEALVLGVKCGLKPETMQEIIGKSSGRSYAMEAKMEKFIMSGD 231 (301)
T ss_dssp STTHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCBHHHHHHCCCCCCTCC
T ss_pred CCCHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHHHHHhhhhhhhcCC
Confidence 65555677666664 23456678999999999999998776542 1 111 11111 11223
Q ss_pred hHHHHHHhcCCChhhHhhhhcCCCccch-HHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHh
Q 012547 347 AWYGQELAKGRLTLDLGDSIKGKGMIQG-ISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILI 418 (461)
Q Consensus 347 ~~~G~~l~~g~~~~~~~~~~~~~~~vEG-~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~il~ 418 (461)
+..| .+++. ....+.++++++++|+ + +|+++++|+++.
T Consensus 232 ~~~g-------------------~~~~~~~kd~~~~~~~a~~~gv--------------~-~p~~~~~~~~~~ 270 (301)
T 3cky_A 232 FAGG-------------------FAMDLQHKDLGLALEAGKEGNV--------------P-LPMTAMATQIFE 270 (301)
T ss_dssp CSSS-------------------SBHHHHHHHHHHHHHHHHHHTC--------------C-CHHHHHHHHHHH
T ss_pred CCCC-------------------ccHHHHHHHHHHHHHHHHHhCC--------------C-ChHHHHHHHHHH
Confidence 2211 12222 2344689999999995 6 899999999886
No 36
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=99.76 E-value=2.7e-17 Score=173.86 Aligned_cols=226 Identities=11% Similarity=0.039 Sum_probs=164.4
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCch----hhhhhhhhhHHHHHhhhhhhHHhhhhccc--cc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGR----SVDRATAEHLFEVINSREDVLRRLIRRCA--YL 114 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~-~V~l~~r~~~----~~~~~~~~~l~~~i~~~~~~~~~~~~n~~--~l 114 (461)
.+|||+|||+|+||+++|..|+++.| + +|++|+++++ +++.++ ++. ++. |.
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G-----~~~V~~~D~~~~~~~~kv~~l~---------~g~--------~~i~~~e 74 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPC-----FEKVLGFQRNSKSSGYKIEMLN---------RGE--------SPLKGEE 74 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTT-----CCEEEEECCCCTTTTTHHHHHT---------TTC--------CCSSCCG
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCC-----CCeEEEEECChhHhHHHHHHHH---------hcC--------CCccccC
Confidence 45899999999999999999997624 8 9999999998 776533 221 333 44
Q ss_pred chhhhhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch------------hHHHHHHHHHH
Q 012547 115 KYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST------------ETKEVFEEISR 182 (461)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~------------~~~~vl~~i~~ 182 (461)
+++. +++.++.. ...+.+++| .+++++||+||+|||+. ++..+++.+.+
T Consensus 75 ~gl~-----------~l~~~~~~-------~g~l~~ttd-~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~ 135 (478)
T 3g79_A 75 PGLE-----------ELIGKVVK-------AGKFECTPD-FSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGK 135 (478)
T ss_dssp GGHH-----------HHHHHHHH-------TTCEEEESC-GGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHH
T ss_pred CCHH-----------HHHHhhcc-------cCCeEEeCc-HHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHh
Confidence 4432 12211100 025788899 57899999999999875 37888899999
Q ss_pred HhhccCCCCEEEEEeecCccccccccccCCHHHHHH-hHhCCC-CCcEEEEeCcchhHhhhcc----CceEEEEeCChhH
Q 012547 183 YWKERITVPVIISLAKGVEAELEAVPRIITPTQMIN-RATGVP-IENILYLGGPNIASEIYNK----EYANARICGAEKW 256 (461)
Q Consensus 183 ~l~~~~~~~iIIs~tkGi~~~~~~~~~~~~~se~i~-~~lg~~-~~~v~vlsGPn~a~ev~~g----~~~~~~~~~~~~~ 256 (461)
++++ +++|| ..+++++. +...+++.+. +..|.. ...+.++++|.++.+.... .+..++.+.+++.
T Consensus 136 ~l~~---g~iVV-~~STv~pg-----tt~~v~~~ile~~~g~~~~~d~~v~~~Pe~~~~G~a~~~~~~~~~Iv~G~~~~~ 206 (478)
T 3g79_A 136 YLKP---GMLVV-LESTITPG-----TTEGMAKQILEEESGLKAGEDFALAHAPERVMVGRLLKNIREHDRIVGGIDEAS 206 (478)
T ss_dssp HCCT---TCEEE-ECSCCCTT-----TTTTHHHHHHHHHHCCCBTTTBEEEECCCCCCTTSHHHHHHHSCEEEEESSHHH
T ss_pred hcCC---CcEEE-EeCCCChH-----HHHHHHHHHHHHhcCCCcCCceeEEeCCccCCccchhhhhcCCcEEEEeCCHHH
Confidence 9987 66665 55588887 5677776443 555532 1346789999998775531 2344566778888
Q ss_pred HHHHHHHhcCC-CceEEecCChHHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhhcc
Q 012547 257 RKPLAKFLRRP-HFTVWDNGDLVTHEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAG 331 (461)
Q Consensus 257 ~~~l~~ll~~~-g~~v~~s~Di~gve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g 331 (461)
.+.++++|+.. +..++...|+...|++|++.|.+- +.-...++|+..+|+++|.|+..+..
T Consensus 207 ~~~~~~ly~~~~~~~~~~~~~~~~aE~~Kl~~N~~~--------------a~~Ia~~nE~~~l~e~~GiD~~~v~~ 268 (478)
T 3g79_A 207 TKRAVELYSPVLTVGQVIPMSATAAEVTKTAENTFR--------------DLQIAAINQLALYCEAMGINVYDVRT 268 (478)
T ss_dssp HHHHHHHHGGGCSSCCEEEEEHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHhhhccCCeEEeCCHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 89999999987 677888889999999999998831 22234789999999999999877643
No 37
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.75 E-value=1.9e-17 Score=162.83 Aligned_cols=259 Identities=12% Similarity=0.064 Sum_probs=167.5
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
++|||+|||+|.||+++|..|++. | ++|++|+ ++++++.+.+ .
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~-g-----~~V~~~~-~~~~~~~~~~---------~--------------------- 44 (295)
T 1yb4_A 2 NAMKLGFIGLGIMGSPMAINLARA-G-----HQLHVTT-IGPVADELLS---------L--------------------- 44 (295)
T ss_dssp --CEEEECCCSTTHHHHHHHHHHT-T-----CEEEECC-SSCCCHHHHT---------T---------------------
T ss_pred CCCEEEEEccCHHHHHHHHHHHhC-C-----CEEEEEc-CHHHHHHHHH---------c---------------------
Confidence 458999999999999999999998 8 8999999 8765543110 0
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchh-HHHHHH---HHHHHhhccCCCCEEEEEe
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-TKEVFE---EISRYWKERITVPVIISLA 197 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~-~~~vl~---~i~~~l~~~~~~~iIIs~t 197 (461)
++..+++++++++++|+||+|||... ++.++. ++.+.+.+ +++||+++
T Consensus 45 -------------------------g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~---~~~vv~~s 96 (295)
T 1yb4_A 45 -------------------------GAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEHGCAKTSLQ---GKTIVDMS 96 (295)
T ss_dssp -------------------------TCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTTSSTTSCCT---TEEEEECS
T ss_pred -------------------------CCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCchhHhhcCCC---CCEEEECC
Confidence 12234677788889999999998664 888887 77777776 68889888
Q ss_pred ecCccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHh--hhccCceEEEEeCChhHHHHHHHHhcCCCceEEecC
Q 012547 198 KGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASE--IYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNG 275 (461)
Q Consensus 198 kGi~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~e--v~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~v~~s~ 275 (461)
+|.... .+.+.+.++.. .+.++..|..... ...+... ++++++++..+.++++|+..|++++...
T Consensus 97 ~~~~~~----------~~~l~~~~~~~--g~~~~~~p~~~~~~~a~~g~~~-~~~~~~~~~~~~~~~ll~~~g~~~~~~~ 163 (295)
T 1yb4_A 97 SISPIE----------TKRFAQRVNEM--GADYLDAPVSGGEIGAREGTLS-IMVGGEQKVFDRVKPLFDILGKNITLVG 163 (295)
T ss_dssp CCCHHH----------HHHHHHHHHTT--TEEEEECCEESHHHHHHHTCEE-EEEESCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred CCCHHH----------HHHHHHHHHHc--CCeEEEccCCCCHHHHHcCCeE-EEECCCHHHHHHHHHHHHHhcCCEEEeC
Confidence 774322 12233433211 1222233332211 1134332 3456677888999999999999888777
Q ss_pred ChHHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhhccC-hhhhhhhhccccchhHHHHHHh
Q 012547 276 DLVTHEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP-LLADTYVTLLKGRNAWYGQELA 354 (461)
Q Consensus 276 Di~gve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g~-glgDl~~T~~~sRN~~~G~~l~ 354 (461)
|.-...|.+.+-|.+ ..++..++.|+..++++.|.+++++... ..++ .++...++ ..+..+.
T Consensus 164 ~~~~~~~~Kl~~n~~--------------~~~~~~~~~E~~~l~~~~G~~~~~~~~~~~~~~--~~s~~~~~-~~~~~~~ 226 (295)
T 1yb4_A 164 GNGDGQTCKVANQII--------------VALNIEAVSEALVFASKAGADPVRVRQALMGGF--ASSRILEV-HGERMIN 226 (295)
T ss_dssp STTHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHTTCCHHHHHHHHTSSS--SCBHHHHH-HHHHHHT
T ss_pred CCCHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCC--CCCHHHHH-hhHHHhc
Confidence 766667777666652 2455678999999999999998776542 1111 11111122 1222332
Q ss_pred cCCChhhHhhhhcCCCccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHh
Q 012547 355 KGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILI 418 (461)
Q Consensus 355 ~g~~~~~~~~~~~~~~~vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~il~ 418 (461)
+..+ .+..+-.....++.++++++++|+ + +|+++++|+++.
T Consensus 227 ~~~~--------~g~~~~~~~kd~~~~~~~a~~~g~--------------~-~p~~~~~~~~~~ 267 (295)
T 1yb4_A 227 RTFE--------PGFKIALHQKDLNLALQSAKALAL--------------N-LPNTATCQELFN 267 (295)
T ss_dssp TCCC--------CSSBHHHHHHHHHHHHHHHHHTTC--------------C-CHHHHHHHHHHH
T ss_pred CCCC--------CCCchHHHHHHHHHHHHHHHHcCC--------------C-ChHHHHHHHHHH
Confidence 2110 111122344566789999999995 6 899999999876
No 38
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.75 E-value=3.8e-17 Score=164.06 Aligned_cols=252 Identities=12% Similarity=0.019 Sum_probs=169.1
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
+|||+|||+|+||+++|..|+++ | .++|++|+|+++..+.... ..+. +..
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~-G----~~~V~~~dr~~~~~~~~~~-----~~~~--------------~~~------ 73 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGR-N----AARLAAYDLRFNDPAASGA-----LRAR--------------AAE------ 73 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-T----CSEEEEECGGGGCTTTHHH-----HHHH--------------HHH------
T ss_pred CCeEEEECccHHHHHHHHHHHHc-C----CCeEEEEeCCCccccchHH-----HHHH--------------HHH------
Confidence 47999999999999999999988 6 1799999999743321100 0000 000
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEec-CHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecCc
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVT-NLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~-dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~ 201 (461)
.++ ++ ++++++++||+||+|||++...+.++++.+.+++ +++||+++ ++.
T Consensus 74 -----------------------~g~--~~~s~~e~~~~aDvVi~avp~~~~~~~~~~i~~~l~~---~~ivv~~s-t~~ 124 (317)
T 4ezb_A 74 -----------------------LGV--EPLDDVAGIACADVVLSLVVGAATKAVAASAAPHLSD---EAVFIDLN-SVG 124 (317)
T ss_dssp -----------------------TTC--EEESSGGGGGGCSEEEECCCGGGHHHHHHHHGGGCCT---TCEEEECC-SCC
T ss_pred -----------------------CCC--CCCCHHHHHhcCCEEEEecCCHHHHHHHHHHHhhcCC---CCEEEECC-CCC
Confidence 023 44 7778899999999999999888888999998877 67888776 555
Q ss_pred cccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEeCChhHHHHHHHHhcCCCceEEecCC-hHHH
Q 012547 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGD-LVTH 280 (461)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~v~~s~D-i~gv 280 (461)
+.. ...+.+.+.+. |.... -+.++||..+. .+.++ ++++++++ +.++++|+..+.+++...+ +-..
T Consensus 125 p~~-----~~~~~~~l~~~-g~~~~-d~pv~g~~~a~---~g~l~-i~vgg~~~--~~~~~ll~~~g~~v~~~g~~~g~a 191 (317)
T 4ezb_A 125 PDT-----KALAAGAIATG-KGSFV-EGAVMARVPPY---AEKVP-ILVAGRRA--VEVAERLNALGMNLEAVGETPGQA 191 (317)
T ss_dssp HHH-----HHHHHHHHHTS-SCEEE-EEEECSCSTTT---GGGSE-EEEESTTH--HHHHHHHHTTTCEEEEEESSTTHH
T ss_pred HHH-----HHHHHHHHHHc-CCeEE-eccCCCCchhh---cCCEE-EEEeCChH--HHHHHHHHHhCCCeEEeCCCcCHH
Confidence 541 22233333321 21111 13578886543 33333 34555444 8899999999988877776 6667
Q ss_pred HHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhhccC--hh-h-hhhhhc--cccchhHHHHHHh
Q 012547 281 EVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP--LL-A-DTYVTL--LKGRNAWYGQELA 354 (461)
Q Consensus 281 e~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g~--gl-g-Dl~~T~--~~sRN~~~G~~l~ 354 (461)
++.+.+-|.+ ......+++|+..+++++|.+++.+..+ +. + +....+ ..+|++..|..+
T Consensus 192 ~~~Kl~~N~~--------------~~~~~~~~~E~~~la~~~Gid~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~- 256 (317)
T 4ezb_A 192 SSLKMIRSVM--------------IKGVEALLIEALSSAERAGVTERILDSVQETFPGLDWRDVADYYLSRTFEHGARR- 256 (317)
T ss_dssp HHHHHHHHHH--------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHH--------------HHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcCccccHHHhhhhhhcCCCCCCcch-
Confidence 8888777763 2344568899999999999999765443 11 1 222222 255666555543
Q ss_pred cCCChhhHhhhhcCCCccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHH
Q 012547 355 KGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKI 416 (461)
Q Consensus 355 ~g~~~~~~~~~~~~~~~vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~i 416 (461)
....+.+.+++++.|+ + +|+++.++++
T Consensus 257 --------------------~KDl~~~~~~a~~~g~--------------~-~pl~~~~~~~ 283 (317)
T 4ezb_A 257 --------------------VTEMTEAAETIESFGL--------------N-APMSRAACET 283 (317)
T ss_dssp --------------------HHHHHHHHHHHHTTTC--------------C-CHHHHHHHHH
T ss_pred --------------------HHHHHHHHHHHHHcCC--------------C-ChHHHHHHHH
Confidence 2334578999999995 6 8999999988
No 39
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.75 E-value=1.7e-17 Score=175.76 Aligned_cols=273 Identities=11% Similarity=0.027 Sum_probs=170.6
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhccC
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (461)
|||+|||+|+||+++|..|+++ | ++|.+|+|++++++.+.+. . .++
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~-G-----~~V~v~dr~~~~~~~l~~~--------~-------------~~g------- 48 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH-G-----FVVCAFNRTVSKVDDFLAN--------E-------------AKG------- 48 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSTHHHHHHHHT--------T-------------TTT-------
T ss_pred CeEEEEChHHHHHHHHHHHHHC-C-----CeEEEEeCCHHHHHHHHhc--------c-------------ccC-------
Confidence 7899999999999999999999 8 8999999998876642210 0 000
Q ss_pred CccchhhhhhhcccccCCCCCCCCeEEecCHHHHh---cCCCEEEEcCCch-hHHHHHHHHHHHhhccCCCCEEEEEeec
Q 012547 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAV---WDADIVINGLPST-ETKEVFEEISRYWKERITVPVIISLAKG 199 (461)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av---~~aDiIIiaVps~-~~~~vl~~i~~~l~~~~~~~iIIs~tkG 199 (461)
.++..++|+++++ +++|+||++||+. .++++++++.+++++ +++||++++|
T Consensus 49 ----------------------~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~vl~~l~~~l~~---g~iII~~s~~ 103 (482)
T 2pgd_A 49 ----------------------TKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDNFIEKLVPLLDI---GDIIIDGGNS 103 (482)
T ss_dssp ----------------------SSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHHHHHHHHHHCCT---TCEEEECSCC
T ss_pred ----------------------CCeEEeCCHHHHHhhccCCCEEEEeCCChHHHHHHHHHHHhhcCC---CCEEEECCCC
Confidence 0355677888876 4899999999995 899999999999887 6899999998
Q ss_pred CccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEeCChhHHHHHHHHhcCCCceEEecCChHH
Q 012547 200 VEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVT 279 (461)
Q Consensus 200 i~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~v~~s~Di~g 279 (461)
..... ..+.+.+.+ .+ +.++.+|....+...+..+.++++++++..+.++++|+..+.++. +|..+
T Consensus 104 ~~~~~------~~l~~~l~~-~g-----~~~v~~pv~g~~~~a~~g~~i~~gg~~e~~~~v~~ll~~~g~~v~--d~~~~ 169 (482)
T 2pgd_A 104 EYRDT------MRRCRDLKD-KG-----ILFVGSGVSGGEDGARYGPSLMPGGNKEAWPHIKAIFQGIAAKVG--TGEPC 169 (482)
T ss_dssp CHHHH------HHHHHHHHH-TT-----CEEEEEEEESHHHHHHHCCEEEEEECTTTHHHHHHHHHHHSCBCT--TSCBS
T ss_pred CHHHH------HHHHHHHHH-cC-----CeEeCCCCCCChhhhccCCeEEeCCCHHHHHHHHHHHHHhhhhcc--CCCcc
Confidence 86542 112233322 12 123345554333322222233556677788899999998877651 11111
Q ss_pred HHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHh-CCCchhhccC-h---hhhhhhhccccchhHHHHHHh
Q 012547 280 HEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLL-AEEPEKLAGP-L---LADTYVTLLKGRNAWYGQELA 354 (461)
Q Consensus 280 ve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~-G~~~~t~~g~-g---lgDl~~T~~~sRN~~~G~~l~ 354 (461)
+.++|. +-.+...++. .|.....+.+++.|+..++++. |.+++++.+. + -|+ .+.+..|++. ..+.
T Consensus 170 ~~~~g~--~g~g~~~Kl~---~N~~~~~~~~~i~Ea~~l~~~~~G~~~~~~~~~~~~w~~g~--~~S~l~~~~~--~~l~ 240 (482)
T 2pgd_A 170 CDWVGD--DGAGHFVKMV---HNGIEYGDMQLICEAYHLMKDVLGLGHKEMAKAFEEWNKTE--LDSFLIEITA--SILK 240 (482)
T ss_dssp CCCCEE--TTHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHTTTT--TCBHHHHHHH--HHHH
T ss_pred eEEECC--CcHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHhcCCC--cCchHHHHHh--HHhh
Confidence 111110 0001111222 2444466778999999999998 9998877553 2 122 1212334443 1233
Q ss_pred cCC-----ChhhHhhhhcCCCccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHH-HHHHHHhc
Q 012547 355 KGR-----LTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILK-MLYKILIM 419 (461)
Q Consensus 355 ~g~-----~~~~~~~~~~~~~~vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~-~ly~il~~ 419 (461)
++. .++.+. .......+.+.++++++++|+ + +|++. .+|+.+..
T Consensus 241 ~~d~~~~~~ld~i~------d~~~~k~t~~~~~~~A~~~Gv--------------~-~P~i~~av~~~~~s 290 (482)
T 2pgd_A 241 FQDADGKHLLPKIR------DSAGQKGTGKWTAISALEYGV--------------P-VTLIGEAVFARCLS 290 (482)
T ss_dssp CBCTTSSBSGGGSC------CCCCCCSHHHHHHHHHHHHTC--------------C-CHHHHHHHHHHHHH
T ss_pred ccCCCCCeeecccc------cccccccHHHHHHHHHHHcCC--------------C-cchHHHHHHHHhhh
Confidence 221 111111 112234566789999999995 7 89995 79998754
No 40
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.74 E-value=4.4e-18 Score=166.45 Aligned_cols=210 Identities=12% Similarity=0.067 Sum_probs=148.6
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhccC
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (461)
|||+|||+|+||+++|..|++. | ++|++|+|++++++.+. +. +.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~-g-----~~V~~~~~~~~~~~~~~---------~~---------------g~------ 44 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRR-G-----HYLIGVSRQQSTCEKAV---------ER---------------QL------ 44 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHH---------HT---------------TS------
T ss_pred CEEEEEcCcHHHHHHHHHHHHC-C-----CEEEEEECCHHHHHHHH---------hC---------------CC------
Confidence 7999999999999999999998 8 89999999987654311 00 00
Q ss_pred CccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecCccc
Q 012547 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEAE 203 (461)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~~~ 203 (461)
....++|++++ .++|+||+|||++.++++++++.+++++ +++|+++ .++...
T Consensus 45 -----------------------~~~~~~~~~~~-~~~D~vi~av~~~~~~~~~~~l~~~~~~---~~~vv~~-~~~~~~ 96 (279)
T 2f1k_A 45 -----------------------VDEAGQDLSLL-QTAKIIFLCTPIQLILPTLEKLIPHLSP---TAIVTDV-ASVKTA 96 (279)
T ss_dssp -----------------------CSEEESCGGGG-TTCSEEEECSCHHHHHHHHHHHGGGSCT---TCEEEEC-CSCCHH
T ss_pred -----------------------CccccCCHHHh-CCCCEEEEECCHHHHHHHHHHHHhhCCC---CCEEEEC-CCCcHH
Confidence 11345677777 8999999999999999999999998876 6788886 333322
Q ss_pred cccccccCCHHHHHHhHhCCC--CCcEE--EEeCcchhH-hhhccCceEEEEe--CChhHHHHHHHHhcCCCceEEecCC
Q 012547 204 LEAVPRIITPTQMINRATGVP--IENIL--YLGGPNIAS-EIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDNGD 276 (461)
Q Consensus 204 ~~~~~~~~~~se~i~~~lg~~--~~~v~--vlsGPn~a~-ev~~g~~~~~~~~--~~~~~~~~l~~ll~~~g~~v~~s~D 276 (461)
. .+.+.+.+... .+++. ..+||+++. ++..+.++.+... .+++..+.++++|+..|++++..+|
T Consensus 97 ~---------~~~~~~~~~~~~~~~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~ 167 (279)
T 2f1k_A 97 I---------AEPASQLWSGFIGGHPMAGTAAQGIDGAEENLFVNAPYVLTPTEYTDPEQLACLRSVLEPLGVKIYLCTP 167 (279)
T ss_dssp H---------HHHHHHHSTTCEEEEECCCCSCSSGGGCCTTTTTTCEEEEEECTTCCHHHHHHHHHHHGGGTCEEEECCH
T ss_pred H---------HHHHHHHhCCEeecCcccCCccCCHHHHhHHHhCCCcEEEecCCCCCHHHHHHHHHHHHHcCCEEEEcCH
Confidence 0 12233333210 11221 345787776 4556655554442 3577889999999999999999999
Q ss_pred hHHHHHHHHHHHH-HHHHHhhccC----c----cchHHHHHHHHHHHHHHHHHHhCCCchhh
Q 012547 277 LVTHEVMGGLKNV-YAIGAALTNE----S----ATSKSVYFAHCTSEMVFITHLLAEEPEKL 329 (461)
Q Consensus 277 i~gve~~galKNv-~Ai~~Gi~~g----~----~n~~a~l~~~~~~Em~~l~~a~G~~~~t~ 329 (461)
....+|+++++|. ..+++++.++ + .+....++++++.|+.+++ +.+|..+
T Consensus 168 ~~~~~~~~~~~~~p~~i~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~r~~---~~~p~~~ 226 (279)
T 2f1k_A 168 ADHDQAVAWISHLPVMVSAALIQACAGEKDGDILKLAQNLASSGFRDTSRVG---GGNPELG 226 (279)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHTCSCHHHHHHHHHHCCHHHHHHHTGG---GSCHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHhcccccchhHHHhhcCCcccchhccc---CCCHHHH
Confidence 9999999999996 6677777653 2 1455567788888887665 3555443
No 41
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.74 E-value=1.3e-16 Score=157.54 Aligned_cols=157 Identities=18% Similarity=0.228 Sum_probs=121.4
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
+|||+|||+|+||++++..|+++ |+ .+ .+|++|+|++++++.+.+ .|
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~-g~-~~-~~V~v~dr~~~~~~~l~~---------------------~~--------- 49 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIAN-GY-DP-NRICVTNRSLDKLDFFKE---------------------KC--------- 49 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHT-TC-CG-GGEEEECSSSHHHHHHHH---------------------TT---------
T ss_pred CCEEEEEcccHHHHHHHHHHHHC-CC-CC-CeEEEEeCCHHHHHHHHH---------------------Hc---------
Confidence 47999999999999999999999 81 11 289999999876653110 00
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHH-hhccCCCCEEEEEeecCc
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRY-WKERITVPVIISLAKGVE 201 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~-l~~~~~~~iIIs~tkGi~ 201 (461)
++..++|..++++++|+||+|||++.++++++++.++ +++ +++|||+++|+.
T Consensus 50 ------------------------gi~~~~~~~~~~~~aDvVilav~p~~~~~vl~~l~~~~l~~---~~iiiS~~agi~ 102 (280)
T 3tri_A 50 ------------------------GVHTTQDNRQGALNADVVVLAVKPHQIKMVCEELKDILSET---KILVISLAVGVT 102 (280)
T ss_dssp ------------------------CCEEESCHHHHHSSCSEEEECSCGGGHHHHHHHHHHHHHTT---TCEEEECCTTCC
T ss_pred ------------------------CCEEeCChHHHHhcCCeEEEEeCHHHHHHHHHHHHhhccCC---CeEEEEecCCCC
Confidence 3456778888899999999999999999999999998 876 679999999997
Q ss_pred cccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEe--CChhHHHHHHHHhcCCCceEEec
Q 012547 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDN 274 (461)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~--~~~~~~~~l~~ll~~~g~~v~~s 274 (461)
.. .+++.++.+ .+ ++..+||++..++.+... +..+ .+++..+.+.++|+..|..+++.
T Consensus 103 ~~------------~l~~~l~~~-~~-vvr~mPn~p~~v~~g~~~-l~~~~~~~~~~~~~v~~l~~~iG~~~~v~ 162 (280)
T 3tri_A 103 TP------------LIEKWLGKA-SR-IVRAMPNTPSSVRAGATG-LFANETVDKDQKNLAESIMRAVGLVIWVS 162 (280)
T ss_dssp HH------------HHHHHHTCC-SS-EEEEECCGGGGGTCEEEE-EECCTTSCHHHHHHHHHHHGGGEEEEECS
T ss_pred HH------------HHHHHcCCC-Ce-EEEEecCChHHhcCccEE-EEeCCCCCHHHHHHHHHHHHHCCCeEEEC
Confidence 64 467777642 34 467889999888776322 1222 24678899999999999866653
No 42
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.73 E-value=1.7e-16 Score=159.49 Aligned_cols=163 Identities=14% Similarity=0.129 Sum_probs=121.6
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch--hhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR--SVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~--~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
+|||+|||+|+||++||..|+++ |...+ ++|++|+|+++ +++.++ +
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~-G~~~~-~~V~v~~r~~~~~~~~~l~---------~--------------------- 69 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAA-GVLAA-HKIMASSPDMDLATVSALR---------K--------------------- 69 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHT-TSSCG-GGEEEECSCTTSHHHHHHH---------H---------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCCCc-ceEEEECCCccHHHHHHHH---------H---------------------
Confidence 47999999999999999999998 73222 68999999875 443210 0
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecC
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi 200 (461)
.++.+++++.++++++|+||+|||+++++++++++.+.+.+ +++||++++|+
T Consensus 70 -------------------------~G~~~~~~~~e~~~~aDvVilav~~~~~~~vl~~l~~~l~~---~~ivvs~s~gi 121 (322)
T 2izz_A 70 -------------------------MGVKLTPHNKETVQHSDVLFLAVKPHIIPFILDEIGADIED---RHIVVSCAAGV 121 (322)
T ss_dssp -------------------------HTCEEESCHHHHHHHCSEEEECSCGGGHHHHHHHHGGGCCT---TCEEEECCTTC
T ss_pred -------------------------cCCEEeCChHHHhccCCEEEEEeCHHHHHHHHHHHHhhcCC---CCEEEEeCCCC
Confidence 02455677888889999999999999999999999998876 68999999998
Q ss_pred ccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEeCC---hhHHHHHHHHhcCCCceEEecCCh
Q 012547 201 EAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGA---EKWRKPLAKFLRRPHFTVWDNGDL 277 (461)
Q Consensus 201 ~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~~~---~~~~~~l~~ll~~~g~~v~~s~Di 277 (461)
.... +.+.+.+.++ .. .++...|+++.++..+. .++.+++ ++..+.++++|+..|+.+++.+|.
T Consensus 122 ~~~~--------l~~~l~~~~~--~~-~vv~~~p~~p~~~~~g~--~v~~~g~~~~~~~~~~v~~ll~~~G~~~~~~e~~ 188 (322)
T 2izz_A 122 TISS--------IEKKLSAFRP--AP-RVIRCMTNTPVVVREGA--TVYATGTHAQVEDGRLMEQLLSSVGFCTEVEEDL 188 (322)
T ss_dssp CHHH--------HHHHHHTTSS--CC-EEEEEECCGGGGGTCEE--EEEEECTTCCHHHHHHHHHHHHTTEEEEECCGGG
T ss_pred CHHH--------HHHHHhhcCC--CC-eEEEEeCCcHHHHcCCe--EEEEeCCCCCHHHHHHHHHHHHhCCCEEEeCHHH
Confidence 7541 2333333322 12 35678899988877663 2233333 677889999999999999888776
Q ss_pred H
Q 012547 278 V 278 (461)
Q Consensus 278 ~ 278 (461)
+
T Consensus 189 ~ 189 (322)
T 2izz_A 189 I 189 (322)
T ss_dssp H
T ss_pred H
Confidence 5
No 43
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.73 E-value=7.4e-17 Score=157.98 Aligned_cols=256 Identities=16% Similarity=0.141 Sum_probs=162.4
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
||||+|||+|+||+++|..|++ | ++|++|+|++++++.+.+. +
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~~--g-----~~V~~~~~~~~~~~~~~~~------------------------g------ 43 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLAR--R-----FPTLVWNRTFEKALRHQEE------------------------F------ 43 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHHT--T-----SCEEEECSSTHHHHHHHHH------------------------H------
T ss_pred CCeEEEEcccHHHHHHHHHHhC--C-----CeEEEEeCCHHHHHHHHHC------------------------C------
Confidence 3789999999999999999986 5 8999999998765532110 0
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchh-HHHHHHHHHHHhhccCCCCEEEEEeecCc
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-TKEVFEEISRYWKERITVPVIISLAKGVE 201 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~-~~~vl~~i~~~l~~~~~~~iIIs~tkGi~ 201 (461)
+..++ +++++.++|+||+|||+.. ++++++++.+.+++ ++++|+++++-.
T Consensus 44 -------------------------~~~~~-~~~~~~~~D~vi~~v~~~~~~~~v~~~l~~~l~~---~~~vv~~s~~~~ 94 (289)
T 2cvz_A 44 -------------------------GSEAV-PLERVAEARVIFTCLPTTREVYEVAEALYPYLRE---GTYWVDATSGEP 94 (289)
T ss_dssp -------------------------CCEEC-CGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCCT---TEEEEECSCCCH
T ss_pred -------------------------CcccC-HHHHHhCCCEEEEeCCChHHHHHHHHHHHhhCCC---CCEEEECCCCCH
Confidence 11122 4566789999999999774 99999999888776 678887775432
Q ss_pred cccccccccCCHHHHHHhHhCCCCCcEEEEeCcch--hHhhhccCceEEEEeCChhHHHHHHHHhcCCCceEEecCChHH
Q 012547 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNI--ASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVT 279 (461)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~--a~ev~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~v~~s~Di~g 279 (461)
.. .+.+.+.++.. .+.++..|.. ......+... +..+++++..+.++++| ..|++++...|...
T Consensus 95 ~~----------~~~l~~~~~~~--g~~~~~~p~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~ll-~~g~~~~~~~~~~~ 160 (289)
T 2cvz_A 95 EA----------SRRLAERLREK--GVTYLDAPVSGGTSGAEAGTLT-VMLGGPEEAVERVRPFL-AYAKKVVHVGPVGA 160 (289)
T ss_dssp HH----------HHHHHHHHHTT--TEEEEECCEESHHHHHHHTCEE-EEEESCHHHHHHHGGGC-TTEEEEEEEESTTH
T ss_pred HH----------HHHHHHHHHHc--CCEEEEecCCCChhHHhhCCeE-EEECCCHHHHHHHHHHH-hhcCCeEEcCCCcH
Confidence 21 12344444321 1223334533 1222344332 23466778889999999 99998777777655
Q ss_pred HHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhhccC-hhhhhhhhccccchhHHHHHHhcCCC
Q 012547 280 HEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP-LLADTYVTLLKGRNAWYGQELAKGRL 358 (461)
Q Consensus 280 ve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g~-glgDl~~T~~~sRN~~~G~~l~~g~~ 358 (461)
..|.+..-|. ...++..++.|+..+++++|.+++++.+. ..++.-. ...+++..+..+.+..
T Consensus 161 ~~~~k~~~n~--------------~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s--~~~~~~~~~~~l~~~~- 223 (289)
T 2cvz_A 161 GHAVKAINNA--------------LLAVNLWAAGEGLLALVKQGVSAEKALEVINASSGRS--NATENLIPQRVLTRAF- 223 (289)
T ss_dssp HHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTCB--HHHHHTHHHHTTTSCC-
T ss_pred HHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHcCcCHHHHHHHHHccCCCC--HHHHHhccchhhcCCC-
Confidence 6666655554 23566789999999999999998876543 2111100 0011111101111111
Q ss_pred hhhHhhhhcCCCccch-HHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHh
Q 012547 359 TLDLGDSIKGKGMIQG-ISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILI 418 (461)
Q Consensus 359 ~~~~~~~~~~~~~vEG-~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~il~ 418 (461)
..+.+++. ....+.++++++++|+ + +|+++++|+++.
T Consensus 224 --------~~g~~~~~~~kd~~~~~~~a~~~gv--------------~-~p~~~~v~~~~~ 261 (289)
T 2cvz_A 224 --------PKTFALGLLVKDLGIAMGVLDGEKA--------------P-SPLLRLAREVYE 261 (289)
T ss_dssp --------CCSSBHHHHHHHHHHHHHHHTTTCC--------------C-CHHHHHHHHHHH
T ss_pred --------CCCcChHHHHHHHHHHHHHHHHcCC--------------C-ChHHHHHHHHHH
Confidence 11123332 2345689999999995 6 899999999886
No 44
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.73 E-value=6.7e-17 Score=155.99 Aligned_cols=161 Identities=18% Similarity=0.128 Sum_probs=119.5
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
+|||+|||+|+||++++..|+++ |++.+ .+|.+|+|++++++.+.++ +
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~-g~~~~-~~V~~~~r~~~~~~~~~~~---------------------~--------- 49 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINK-NIVSS-NQIICSDLNTANLKNASEK---------------------Y--------- 49 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TSSCG-GGEEEECSCHHHHHHHHHH---------------------H---------
T ss_pred CCeEEEECccHHHHHHHHHHHhC-CCCCC-CeEEEEeCCHHHHHHHHHH---------------------h---------
Confidence 47999999999999999999999 82111 2999999998765532100 0
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecCcc
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~~ 202 (461)
++..++|++++++++|+||+|||++.++++++++.+++++ ++++||+++|+..
T Consensus 50 ------------------------g~~~~~~~~e~~~~aDvVilav~~~~~~~v~~~l~~~l~~---~~~vvs~~~gi~~ 102 (247)
T 3gt0_A 50 ------------------------GLTTTTDNNEVAKNADILILSIKPDLYASIINEIKEIIKN---DAIIVTIAAGKSI 102 (247)
T ss_dssp ------------------------CCEECSCHHHHHHHCSEEEECSCTTTHHHHC---CCSSCT---TCEEEECSCCSCH
T ss_pred ------------------------CCEEeCChHHHHHhCCEEEEEeCHHHHHHHHHHHHhhcCC---CCEEEEecCCCCH
Confidence 2455678888889999999999999999999999998876 6899999999875
Q ss_pred ccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEE--eCChhHHHHHHHHhcCCCceEEecCCh
Q 012547 203 ELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARI--CGAEKWRKPLAKFLRRPHFTVWDNGDL 277 (461)
Q Consensus 203 ~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~--~~~~~~~~~l~~ll~~~g~~v~~s~Di 277 (461)
+ .+++.++.+ .+ .+...|+++..+..|... +.. ..+++..+.++++|+..|..+++.++.
T Consensus 103 ~------------~l~~~~~~~-~~-~v~~~p~~p~~~~~g~~~-~~~~~~~~~~~~~~~~~l~~~~G~~~~~~e~~ 164 (247)
T 3gt0_A 103 E------------STENAFNKK-VK-VVRVMPNTPALVGEGMSA-LCPNEMVTEKDLEDVLNIFNSFGQTEIVSEKL 164 (247)
T ss_dssp H------------HHHHHHCSC-CE-EEEEECCGGGGGTCEEEE-EEECTTCCHHHHHHHHHHHGGGEEEEECCGGG
T ss_pred H------------HHHHHhCCC-Cc-EEEEeCChHHHHcCceEE-EEeCCCCCHHHHHHHHHHHHhCCCEEEeCHHH
Confidence 4 466767532 23 456789998877776422 222 246778899999999999877776554
No 45
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.72 E-value=4.6e-16 Score=155.65 Aligned_cols=251 Identities=10% Similarity=0.047 Sum_probs=162.7
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCc--hhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhh
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPG--RSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~-~V~l~~r~~--~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~ 118 (461)
.+|||+|||+|.||+++|..|+++ | + +|++|+|++ +..+.+ ..
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~-G-----~~~V~~~dr~~~~~~~~~~--------------------------~~-- 68 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQA-G-----AIDMAAYDAASAESWRPRA--------------------------EE-- 68 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHH-S-----CCEEEEECSSCHHHHHHHH--------------------------HH--
T ss_pred CCCEEEEECccHHHHHHHHHHHHC-C-----CCeEEEEcCCCCHHHHHHH--------------------------HH--
Confidence 468999999999999999999999 8 8 999999973 333210 00
Q ss_pred hhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEee
Q 012547 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (461)
Q Consensus 119 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tk 198 (461)
.++..++++++++++||+||+|||++...++++++.+.+++ +++||.++
T Consensus 69 ---------------------------~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~~~~l~~~l~~---~~ivvd~s- 117 (312)
T 3qsg_A 69 ---------------------------LGVSCKASVAEVAGECDVIFSLVTAQAALEVAQQAGPHLCE---GALYADFT- 117 (312)
T ss_dssp ---------------------------TTCEECSCHHHHHHHCSEEEECSCTTTHHHHHHHHGGGCCT---TCEEEECC-
T ss_pred ---------------------------CCCEEeCCHHHHHhcCCEEEEecCchhHHHHHHhhHhhcCC---CCEEEEcC-
Confidence 03456678888899999999999999988899999998876 67888766
Q ss_pred cCccccccccccCCHHHHHHhHh-CCCCCcEEEEeCcchhHhhhccCceEEEEeCChhHHHHHHHHhcCCCceEEecCC-
Q 012547 199 GVEAELEAVPRIITPTQMINRAT-GVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGD- 276 (461)
Q Consensus 199 Gi~~~~~~~~~~~~~se~i~~~l-g~~~~~v~vlsGPn~a~ev~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~v~~s~D- 276 (461)
++.+. +...+.+.+.+.. |..... +.++||..+. .+..+ +++++++. +.++++|+..+.+++...+
T Consensus 118 t~~~~-----~~~~~~~~~~~~~~g~~~vd-~pv~g~~~~~---~g~l~-i~vgg~~~--~~~~~ll~~~g~~~~~~g~~ 185 (312)
T 3qsg_A 118 SCSPA-----VKRAIGDVISRHRPSAQYAA-VAVMSAVKPH---GHRVP-LVVDGDGA--RRFQAAFTLYGCRIEVLDGE 185 (312)
T ss_dssp CCCHH-----HHHHHHHHHHHHCTTCEEEE-EEECSCSTTT---GGGSE-EEEESTTH--HHHHHHHHTTTCEEEECCSS
T ss_pred CCCHH-----HHHHHHHHHHhhcCCCeEEe-ccccCCchhh---cCCEE-EEecCChH--HHHHHHHHHhCCCeEEcCCC
Confidence 44443 1222333333321 321111 3456665433 33333 34455444 8899999999998887776
Q ss_pred hHHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhhccC--hhhh--h--hhhccccchhHHH
Q 012547 277 LVTHEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP--LLAD--T--YVTLLKGRNAWYG 350 (461)
Q Consensus 277 i~gve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g~--glgD--l--~~T~~~sRN~~~G 350 (461)
+-..++.+.+-|.+. .....+++|+..+++++|.+++.+..+ +.+. + +.....+|++..|
T Consensus 186 ~g~a~~~Kl~~n~~~--------------~~~~~~~~Ea~~la~~~Gld~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g 251 (312)
T 3qsg_A 186 VGGAALLKMCRSAVL--------------KGLEALFLEALAAAEKMGLADRVLASLDASFPEHHLRDLALYLVERNLEHA 251 (312)
T ss_dssp TTHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHSGGGTHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHcCCCHHHHHHHHhcCCchhHHHhhhHhhcCCCCcc
Confidence 666777777666622 233357899999999999988433211 1110 0 0000122333332
Q ss_pred HHHhcCCChhhHhhhhcCCCccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhc
Q 012547 351 QELAKGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIM 419 (461)
Q Consensus 351 ~~l~~g~~~~~~~~~~~~~~~vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~il~~ 419 (461)
..+ ....+.+.+.+++.|+ + +|+++++++++..
T Consensus 252 ~~~---------------------~KDl~~~~~~a~~~g~--------------~-~pl~~~~~~~~~~ 284 (312)
T 3qsg_A 252 DRR---------------------AHELGEVAATLCSVGV--------------E-PLVAEAGYRRLTR 284 (312)
T ss_dssp HHH---------------------HHHHHHHHHHHHHTTC--------------C-CHHHHHHHHHHHH
T ss_pred cch---------------------HHHHHHHHHHHHHcCC--------------C-cHHHHHHHHHHHH
Confidence 222 2344578899999995 6 8999999887753
No 46
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=99.71 E-value=1.2e-16 Score=169.25 Aligned_cols=227 Identities=13% Similarity=0.095 Sum_probs=156.5
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
++|||+|||+|+||+.+|..|+++ |. +++|++|++++++++.+++ +. .+.+.+++.
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~-g~---g~~V~~~D~~~~~v~~l~~---------g~--------~~i~e~gl~--- 63 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHK-CP---HITVTVVDMNTAKIAEWNS---------DK--------LPIYEPGLD--- 63 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHH-CT---TSEEEEECSCHHHHHHHTS---------SS--------CSSCCTTHH---
T ss_pred CCCEEEEECCCHHHHHHHHHHHhc-CC---CCEEEEEECCHHHHHHHHC---------CC--------CCcCCCCHH---
Confidence 468999999999999999999987 30 1799999999988776432 11 222333221
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch---------------hHHHHHHHHHHHhhc
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST---------------ETKEVFEEISRYWKE 186 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~---------------~~~~vl~~i~~~l~~ 186 (461)
+++..+. ..++.+++|+++++++||+||+|||+. ++++++++|.+++++
T Consensus 64 --------~~~~~~~--------~~~l~~t~~~~~~~~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~ 127 (481)
T 2o3j_A 64 --------EIVFAAR--------GRNLFFSSDIPKAIAEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGG 127 (481)
T ss_dssp --------HHHHHHB--------TTTEEEESCHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCS
T ss_pred --------HHHHHhh--------cCCEEEECCHHHHhhcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCC
Confidence 1111100 014788899988899999999999763 489999999999887
Q ss_pred cCCCCEEEEEeecCccccccccccCCHHHHHHhHhCC-CCCcEEEEeCcchhHhhhc----cCceEEEEeCCh-----hH
Q 012547 187 RITVPVIISLAKGVEAELEAVPRIITPTQMINRATGV-PIENILYLGGPNIASEIYN----KEYANARICGAE-----KW 256 (461)
Q Consensus 187 ~~~~~iIIs~tkGi~~~~~~~~~~~~~se~i~~~lg~-~~~~v~vlsGPn~a~ev~~----g~~~~~~~~~~~-----~~ 256 (461)
+++||..+ ++.+. +...+.+.+.+..+. ....+.+.++|.++.+... ..+..+++++.+ +.
T Consensus 128 ---g~iVV~~S-Tv~~g-----t~~~l~~~l~~~~~~~~~~d~~v~~~Pe~~~~G~a~~~~~~~~~iviG~~~~~~~~~a 198 (481)
T 2o3j_A 128 ---PKIVVEKS-TVPVK-----AAESIGCILREAQKNNENLKFQVLSNPEFLAEGTAMKDLANPDRVLIGGESSPEGLQA 198 (481)
T ss_dssp ---CEEEEECS-CCCTT-----HHHHHHHHHHHHTC----CCEEEEECCCCCCTTCHHHHHHSCSCEEEEECSSHHHHHH
T ss_pred ---CCEEEECC-CCCCC-----HHHHHHHHHHHhhCcCcCCceEEEeCcccccccchhhcccCCCEEEEEecCchhhHHH
Confidence 66666444 66655 233344555542221 1134567899998766542 223334554332 46
Q ss_pred HHHHHHHhcCCCc-eEEecCChHHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhhcc
Q 012547 257 RKPLAKFLRRPHF-TVWDNGDLVTHEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAG 331 (461)
Q Consensus 257 ~~~l~~ll~~~g~-~v~~s~Di~gve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g 331 (461)
.+.++++|+..+. .++...|+...||.|.+.|.+ .++....++|+..+|+++|.+++++.+
T Consensus 199 ~~~l~~l~~~~~~~~~~~~~d~~~ae~~Kl~~N~~--------------~a~~ia~~nE~~~la~~~Gid~~~v~~ 260 (481)
T 2o3j_A 199 VAELVRIYENWVPRNRIITTNTWSSELSKLVANAF--------------LAQRISSINSISAVCEATGAEISEVAH 260 (481)
T ss_dssp HHHHHHHHHTTSCGGGEEEEEHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHSCCHHHHHH
T ss_pred HHHHHHHHHhhcCCCeEEecCHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHhCcCHHHHHH
Confidence 6888999998874 677788999999999988873 244456899999999999999887654
No 47
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.71 E-value=1.7e-16 Score=167.84 Aligned_cols=278 Identities=11% Similarity=0.022 Sum_probs=177.9
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
+|||+|||+|+||+++|..|+++ | ++|.+|+|++++++.+.++ .++
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~-G-----~~V~v~dr~~~~~~~l~~~----------------------~~~------ 50 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESR-G-----YTVAIYNRTTSKTEEVFKE----------------------HQD------ 50 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSHHHHHHHHHH----------------------TTT------
T ss_pred CCcEEEEeeHHHHHHHHHHHHhC-C-----CEEEEEcCCHHHHHHHHHh----------------------CcC------
Confidence 37899999999999999999999 8 8999999998776542210 000
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcC---CCEEEEcCCc-hhHHHHHHHHHHHhhccCCCCEEEEEee
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD---ADIVINGLPS-TETKEVFEEISRYWKERITVPVIISLAK 198 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~---aDiIIiaVps-~~~~~vl~~i~~~l~~~~~~~iIIs~tk 198 (461)
.++..++|++++++. +|+||+|||+ +.++++++++.+++++ +++||++++
T Consensus 51 -----------------------~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~vl~~l~~~l~~---g~iiId~s~ 104 (474)
T 2iz1_A 51 -----------------------KNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDATIKSLLPLLDI---GDILIDGGN 104 (474)
T ss_dssp -----------------------SCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHHHHHHHGGGCCT---TCEEEECSC
T ss_pred -----------------------CCeEEeCCHHHHHhhccCCCEEEEEccCchHHHHHHHHHHhhCCC---CCEEEECCC
Confidence 035567788887776 9999999998 5899999999998877 689999998
Q ss_pred cCccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHh--hhccCceEEEEeCChhHHHHHHHHhcCCCce------
Q 012547 199 GVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASE--IYNKEYANARICGAEKWRKPLAKFLRRPHFT------ 270 (461)
Q Consensus 199 Gi~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~e--v~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~------ 270 (461)
|..... +.+.+.+... .+.++..|....+ ...|. + ++++++++..+.++++|+..+.+
T Consensus 105 ~~~~~~----------~~l~~~l~~~--g~~~v~~pv~gg~~~a~~g~-~-i~~gg~~~~~~~v~~ll~~~g~~~~~dge 170 (474)
T 2iz1_A 105 THFPDT----------MRRNAELADS--GINFIGTGVSGGEKGALLGP-S-MMPGGQKEAYDLVAPIFEQIAAKAPQDGK 170 (474)
T ss_dssp CCHHHH----------HHHHHHTTTS--SCEEEEEEECSHHHHHHHCC-C-EEEEECHHHHHHHHHHHHHHSCBCTTTCC
T ss_pred CCHHHH----------HHHHHHHHHC--CCeEECCCCCCChhhhccCC-e-EEecCCHHHHHHHHHHHHHHhcccccCCC
Confidence 875431 2344444321 1222333443222 22343 3 34566778888899998876654
Q ss_pred --EEecCChHHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHH-hCCCchhhccC------h-hhhhhhh
Q 012547 271 --VWDNGDLVTHEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHL-LAEEPEKLAGP------L-LADTYVT 340 (461)
Q Consensus 271 --v~~s~Di~gve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a-~G~~~~t~~g~------g-lgDl~~T 340 (461)
+....+.-...|.+..- |....++.+++.|+..++++ +|.+++++.++ | +++...+
T Consensus 171 ~~~~~~g~~g~g~~~Kl~~--------------N~~~~~~~~~laEa~~l~~~~~Gl~~~~~~~l~~~w~~g~~~s~l~~ 236 (474)
T 2iz1_A 171 PCVAYMGANGAGHYVKMVH--------------NGIEYGDMQLIAESYDLLKRILGLSNAEIQAIFEEWNEGELDSYLIE 236 (474)
T ss_dssp BSBCCCBSTTHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHTTTTTCBHHHH
T ss_pred ceEEEECCccHHHHHHHHH--------------hHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhcCCCccccHHH
Confidence 22233321123333333 33345667899999999999 89998876542 3 5556666
Q ss_pred cc----ccchhHHHHHHhcCCChhhHhhhhcCCCccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHH--H
Q 012547 341 LL----KGRNAWYGQELAKGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKML--Y 414 (461)
Q Consensus 341 ~~----~sRN~~~G~~l~~g~~~~~~~~~~~~~~~vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~l--y 414 (461)
|. .+||+..|. ...+.+.|.. .+.-.| +.+.+.++++|+ + +|+++.. +
T Consensus 237 ~~~~~l~~~d~~~g~-----~~vd~i~D~~--~~k~tG----~~~~~~A~~~gv--------------~-~P~~~~av~a 290 (474)
T 2iz1_A 237 ITKEVLKRKDDEGEG-----YIVDKILDKA--GNKGTG----KWTSESALDLGV--------------P-LPLITESVFA 290 (474)
T ss_dssp HHHHHTTCBCSSSSS-----BGGGGBCSCC--CCCSHH----HHHHHHHHHHTC--------------C-CHHHHHHHHH
T ss_pred hhhhHhhcCCCCCCh-----hHHHHHHHhh--cccchH----HHHHHHHHHcCC--------------C-CchHHHHHHH
Confidence 62 456765441 1121122111 112233 467788999995 7 8999884 6
Q ss_pred HHHhcCCCHHHHHHHHHhcc
Q 012547 415 KILIMRESPIQAILEALRDE 434 (461)
Q Consensus 415 ~il~~~~~~~~~~~~~l~~~ 434 (461)
+++...++......+++..+
T Consensus 291 r~~s~~k~~r~~~~~~~~g~ 310 (474)
T 2iz1_A 291 RYISTYKDERVKASKVLSGP 310 (474)
T ss_dssp HHHHHCHHHHHHHHHHCCCC
T ss_pred HHhhhhhhhhHHhhhccCCC
Confidence 67776655444444555544
No 48
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=99.70 E-value=1.9e-16 Score=165.39 Aligned_cols=219 Identities=15% Similarity=0.088 Sum_probs=156.1
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhccC
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (461)
.|.+|||+|+||+.+|..|+++ | |+|++|++++++++.++ ++ +++.|.+++.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~-G-----~~V~~~D~~~~kv~~L~---------~g--------~~pi~epgl~----- 63 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKH-G-----VDVLGVDINQQTIDKLQ---------NG--------QISIEEPGLQ----- 63 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHH---------TT--------CCSSCCTTHH-----
T ss_pred CccEEEeeCHHHHHHHHHHHHC-C-----CEEEEEECCHHHHHHHH---------CC--------CCCcCCCCHH-----
Confidence 4899999999999999999999 8 99999999999887643 32 2456666542
Q ss_pred CccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchh------------HHHHHHHHHHHhhccCCCC
Q 012547 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE------------TKEVFEEISRYWKERITVP 191 (461)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~------------~~~vl~~i~~~l~~~~~~~ 191 (461)
|++.+.+.. ..+.+++|+ ++||+||+|||+.. +..+++.+.+++++ ++
T Consensus 64 ------~ll~~~~~~-------g~l~~ttd~----~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~---g~ 123 (431)
T 3ojo_A 64 ------EVYEEVLSS-------GKLKVSTTP----EASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKK---GN 123 (431)
T ss_dssp ------HHHHHHHHT-------TCEEEESSC----CCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCT---TE
T ss_pred ------HHHHhhccc-------CceEEeCch----hhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCC---CC
Confidence 222221100 257888874 57999999999754 88888999999887 56
Q ss_pred EEEEEeecCccccccccccCCHHHHHHhHhCCC-CCcEEEEeCcchhHhhhc----cCceEEEEeCChhHHHHHHHHhcC
Q 012547 192 VIISLAKGVEAELEAVPRIITPTQMINRATGVP-IENILYLGGPNIASEIYN----KEYANARICGAEKWRKPLAKFLRR 266 (461)
Q Consensus 192 iIIs~tkGi~~~~~~~~~~~~~se~i~~~lg~~-~~~v~vlsGPn~a~ev~~----g~~~~~~~~~~~~~~~~l~~ll~~ 266 (461)
+|| ..+++++. +.+.+++.+.+..|.. ...+.++++|.+..+... ..+..++.+++++..+.++++|+.
T Consensus 124 iVV-~~STV~pg-----tt~~v~~~i~e~~g~~~~~d~~v~~~Pe~~~~G~A~~~~~~p~~Iv~G~~~~~~~~~~~ly~~ 197 (431)
T 3ojo_A 124 TII-VESTIAPK-----TMDDFVKPVIENLGFTIGEDIYLVHCPERVLPGKILEELVHNNRIIGGVTKACIEAGKRVYRT 197 (431)
T ss_dssp EEE-ECSCCCTT-----HHHHTHHHHHHTTTCCBTTTEEEEECCCCCCTTSHHHHHHHSCEEEEESSHHHHHHHHHHHTT
T ss_pred EEE-EecCCChh-----HHHHHHHHHHHHcCCCcCCCeEEEECCCcCCCcchhhcccCCCEEEEeCCHHHHHHHHHHHHH
Confidence 555 55588876 3444445444434421 235789999988766542 224455667778888999999987
Q ss_pred CCceEEecCChHHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhhc
Q 012547 267 PHFTVWDNGDLVTHEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLA 330 (461)
Q Consensus 267 ~g~~v~~s~Di~gve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~ 330 (461)
-+-.+....|+...|+.+++-|.+ + +.-...++|+..+|+++|.|++.+.
T Consensus 198 ~~~~~~~~~~~~~AE~~Kl~~N~~-------------~-a~~Ia~~nE~~~l~e~~GiD~~~v~ 247 (431)
T 3ojo_A 198 FVQGEMIETDARTAEMSKLMENTY-------------R-DVNIALANELTKICNNLNINVLDVI 247 (431)
T ss_dssp TCCSCEEEEEHHHHHHHHHHHHHH-------------H-HHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HhCCcEEeCCHHHHHHHHHHHHHH-------------H-HHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 654444557888899999888872 1 2223478999999999999876553
No 49
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.69 E-value=4.4e-16 Score=165.56 Aligned_cols=286 Identities=10% Similarity=-0.008 Sum_probs=171.8
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
..+|+|||+|+||++||..|+++ | ++|++|+|++++++.+.+ .. .++
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~-G-----~~V~v~dr~~~~~~~l~~--------~~-------------~~~------ 56 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADH-G-----FTVCAYNRTQSKVDHFLA--------NE-------------AKG------ 56 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSSHHHHHHHH--------TT-------------TTT------
T ss_pred CCCEEEEeeHHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHHc--------cc-------------ccC------
Confidence 35899999999999999999999 8 999999999987764221 00 000
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcC---CCEEEEcCCc-hhHHHHHHHHHHHhhccCCCCEEEEEee
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD---ADIVINGLPS-TETKEVFEEISRYWKERITVPVIISLAK 198 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~---aDiIIiaVps-~~~~~vl~~i~~~l~~~~~~~iIIs~tk 198 (461)
.++..++|++++++. +|+||++||+ +.++++++++.+++++ +++||++++
T Consensus 57 -----------------------~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~vl~~l~~~l~~---g~iIId~s~ 110 (497)
T 2p4q_A 57 -----------------------KSIIGATSIEDFISKLKRPRKVMLLVKAGAPVDALINQIVPLLEK---GDIIIDGGN 110 (497)
T ss_dssp -----------------------SSEECCSSHHHHHHTSCSSCEEEECCCSSHHHHHHHHHHGGGCCT---TCEEEECSC
T ss_pred -----------------------CCeEEeCCHHHHHhcCCCCCEEEEEcCChHHHHHHHHHHHHhCCC---CCEEEECCC
Confidence 035566788888776 9999999999 6999999999999887 689999998
Q ss_pred cCccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEeCChhHHHHHHHHhcCCCce------EE
Q 012547 199 GVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFT------VW 272 (461)
Q Consensus 199 Gi~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~------v~ 272 (461)
|..... ..+.+.+.+ .|.......+..||..+. .|. .++++++++..+.++++|+..+.+ +.
T Consensus 111 ~~~~~~------~~l~~~l~~-~g~~~v~~pVsgg~~~a~---~G~--~im~gg~~e~~~~v~~ll~~~g~~~dGe~~v~ 178 (497)
T 2p4q_A 111 SHFPDS------NRRYEELKK-KGILFVGSGVSGGEEGAR---YGP--SLMPGGSEEAWPHIKNIFQSISAKSDGEPCCE 178 (497)
T ss_dssp CCHHHH------HHHHHHHHH-TTCEEEEEEEESHHHHHH---HCC--EEEEEECGGGHHHHHHHHHHHSCEETTEESCC
T ss_pred CChhHH------HHHHHHHHH-cCCceeCCCcccChhHhh---cCC--eEEecCCHHHHHHHHHHHHHhcCccCCCCceE
Confidence 876431 112232322 131111122333444432 343 345577788889999999876655 22
Q ss_pred ecCChHHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHH-hCCCchhhccC-h-h--hhhhhhccccchh
Q 012547 273 DNGDLVTHEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHL-LAEEPEKLAGP-L-L--ADTYVTLLKGRNA 347 (461)
Q Consensus 273 ~s~Di~gve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a-~G~~~~t~~g~-g-l--gDl~~T~~~sRN~ 347 (461)
...+.-...+.+.. .|.....+.+++.|+..++++ +|.+++++.++ . | |++ ++...+|+
T Consensus 179 ~vg~~G~g~~~Kl~--------------~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~~~~~w~~g~~--~S~l~~~~ 242 (497)
T 2p4q_A 179 WVGPAGAGHYVKMV--------------HNGIEYGDMQLICEAYDIMKRLGGFTDKEISDVFAKWNNGVL--DSFLVEIT 242 (497)
T ss_dssp CCEETTHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTTTT--CBHHHHHH
T ss_pred EECCccHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHhcCCcc--ccHHHHHH
Confidence 22211111222222 244445667899999999999 79999887653 1 1 221 22234554
Q ss_pred HHHHHHhcCCChh-hHhhhhcCCCccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHH-H-HHHHhcCCCHH
Q 012547 348 WYGQELAKGRLTL-DLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKM-L-YKILIMRESPI 424 (461)
Q Consensus 348 ~~G~~l~~g~~~~-~~~~~~~~~~~vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~-l-y~il~~~~~~~ 424 (461)
. ..+.++.... -..+.+.....--| +.+...+.++++|+ + +|++.. + .+++...+...
T Consensus 243 ~--~~l~~~d~~~~~~vd~i~D~~~~Kg--tG~~~~~~A~~~Gv--------------~-~P~~~~av~ar~~s~~k~~r 303 (497)
T 2p4q_A 243 R--DILKFDDVDGKPLVEKIMDTAGQKG--TGKWTAINALDLGM--------------P-VTLIGEAVFARCLSALKNER 303 (497)
T ss_dssp H--HHHTCBCTTSSBGGGGSCCCCCCCS--HHHHHHHHHHHHTC--------------C-CHHHHHHHHHHHHHHCHHHH
T ss_pred H--HHHhcCCCCCccHHHHHHHhhccch--HHHHHHHHHHHcCC--------------C-CchHHHHHHHHHhhcchhhH
Confidence 2 3444432100 00111110000011 23457788999995 6 899887 4 45555544433
Q ss_pred HHHHHHHhcc
Q 012547 425 QAILEALRDE 434 (461)
Q Consensus 425 ~~~~~~l~~~ 434 (461)
....+++..+
T Consensus 304 ~~~~~~~~gp 313 (497)
T 2p4q_A 304 IRASKVLPGP 313 (497)
T ss_dssp HHHHHHCCCC
T ss_pred HHHhhhcCCC
Confidence 3443455444
No 50
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.69 E-value=2.2e-15 Score=145.69 Aligned_cols=153 Identities=12% Similarity=0.145 Sum_probs=116.0
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
+|||+|||+|+||+++|..|+++ |++.+ ++|++|+|++++ .
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~-g~~~~-~~v~~~~~~~~~------------------------------~------- 44 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANA-NIIKK-ENLFYYGPSKKN------------------------------T------- 44 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHH-TSSCG-GGEEEECSSCCS------------------------------S-------
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-CCCCC-CeEEEEeCCccc------------------------------C-------
Confidence 47999999999999999999998 73221 589999998642 0
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecCcc
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~~ 202 (461)
++..+++++++++++|+||+|||++.++++++++.+++ + ++.+|+.++|+..
T Consensus 45 ------------------------g~~~~~~~~~~~~~~D~vi~~v~~~~~~~v~~~l~~~l-~---~~~vv~~~~gi~~ 96 (262)
T 2rcy_A 45 ------------------------TLNYMSSNEELARHCDIIVCAVKPDIAGSVLNNIKPYL-S---SKLLISICGGLNI 96 (262)
T ss_dssp ------------------------SSEECSCHHHHHHHCSEEEECSCTTTHHHHHHHSGGGC-T---TCEEEECCSSCCH
T ss_pred ------------------------ceEEeCCHHHHHhcCCEEEEEeCHHHHHHHHHHHHHhc-C---CCEEEEECCCCCH
Confidence 12345677788889999999999999999999999887 4 5789999999876
Q ss_pred ccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEeC--ChhHHHHHHHHhcCCCceEEecCCh
Q 012547 203 ELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICG--AEKWRKPLAKFLRRPHFTVWDNGDL 277 (461)
Q Consensus 203 ~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~~--~~~~~~~l~~ll~~~g~~v~~s~Di 277 (461)
+ .+++.++.. .+ .+..+|+++..+..| .+.+..+. +++..+.++++|+..|..++..+|.
T Consensus 97 ~------------~l~~~~~~~-~~-~v~~~p~~p~~~~~g-~~~~~~~~~~~~~~~~~~~~ll~~~G~~~~~~~~~ 158 (262)
T 2rcy_A 97 G------------KLEEMVGSE-NK-IVWVMPNTPCLVGEG-SFIYCSNKNVNSTDKKYVNDIFNSCGIIHEIKEKD 158 (262)
T ss_dssp H------------HHHHHHCTT-SE-EEEEECCGGGGGTCE-EEEEEECTTCCHHHHHHHHHHHHTSEEEEECCGGG
T ss_pred H------------HHHHHhCCC-Cc-EEEECCChHHHHcCC-eEEEEeCCCCCHHHHHHHHHHHHhCCCEEEeCHHH
Confidence 4 366666531 13 356789998888777 44333332 5677899999999999855555554
No 51
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.69 E-value=1.2e-15 Score=147.61 Aligned_cols=250 Identities=14% Similarity=0.136 Sum_probs=156.8
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhccC
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (461)
|||+|||+|+||+++|..|+++ |. ++|++|+|++++++.+.++ +
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~-g~----~~v~~~~r~~~~~~~~~~~---------------------~---------- 44 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQ-GG----YRIYIANRGAEKRERLEKE---------------------L---------- 44 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-CS----CEEEEECSSHHHHHHHHHH---------------------T----------
T ss_pred CEEEEECchHHHHHHHHHHHHC-CC----CeEEEECCCHHHHHHHHHh---------------------c----------
Confidence 7999999999999999999988 62 6899999998765532110 0
Q ss_pred CccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecCccc
Q 012547 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEAE 203 (461)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~~~ 203 (461)
++..++|+++++ ++|+||+|||++.++++++++.+ + +++||++++|+.++
T Consensus 45 -----------------------g~~~~~~~~~~~-~~D~vi~~v~~~~~~~v~~~l~~--~----~~ivv~~~~g~~~~ 94 (263)
T 1yqg_A 45 -----------------------GVETSATLPELH-SDDVLILAVKPQDMEAACKNIRT--N----GALVLSVAAGLSVG 94 (263)
T ss_dssp -----------------------CCEEESSCCCCC-TTSEEEECSCHHHHHHHHTTCCC--T----TCEEEECCTTCCHH
T ss_pred -----------------------CCEEeCCHHHHh-cCCEEEEEeCchhHHHHHHHhcc--C----CCEEEEecCCCCHH
Confidence 233445666667 99999999999999999988765 2 47899999998763
Q ss_pred cccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEeC--ChhHHHHHHHHhcCCCceEEec-CChHHH
Q 012547 204 LEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICG--AEKWRKPLAKFLRRPHFTVWDN-GDLVTH 280 (461)
Q Consensus 204 ~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~~--~~~~~~~l~~ll~~~g~~v~~s-~Di~gv 280 (461)
.+++.++.. .++ +...|+++..+..|... +..+. +++..+.++++|+..|+++++. +|
T Consensus 95 ------------~l~~~~~~~-~~~-v~~~~~~~~~~~~g~~~-i~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~---- 155 (263)
T 1yqg_A 95 ------------TLSRYLGGT-RRI-VRVMPNTPGKIGLGVSG-MYAEAEVSETDRRIADRIMKSVGLTVWLDDEE---- 155 (263)
T ss_dssp ------------HHHHHTTSC-CCE-EEEECCGGGGGTCEEEE-EECCTTSCHHHHHHHHHHHHTTEEEEECSSTT----
T ss_pred ------------HHHHHcCCC-CcE-EEEcCCHHHHHcCceEE-EEcCCCCCHHHHHHHHHHHHhCCCEEEeCChh----
Confidence 466666532 233 33479988877766432 23343 5677899999999999998777 55
Q ss_pred HHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhhccChhhhhhhhccccchhHHHHHHh-cCCCh
Q 012547 281 EVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQELA-KGRLT 359 (461)
Q Consensus 281 e~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g~glgDl~~T~~~sRN~~~G~~l~-~g~~~ 359 (461)
.+.++.|+. |. ++.. ...+..++.|+ +++.|.+++++..+ .... . ...+..+. .|.+.
T Consensus 156 ----~~~~~~al~-g~---~~~~-~~~~~~~l~e~---~~~~G~~~~~~~~~-----~~~~--~--~~~~~~~~~~~~~~ 214 (263)
T 1yqg_A 156 ----KMHGITGIS-GS---GPAY-VFYLLDALQNA---AIRQGFDMAEARAL-----SLAT--F--KGAVALAEQTGEDF 214 (263)
T ss_dssp ----HHHHHHHHT-TS---HHHH-HHHHHHHHHHH---HHHTTCCHHHHHHH-----HHHH--H--HHHHHHHHHHCCCH
T ss_pred ----hccHHHHHH-cc---HHHH-HHHHHHHHHHH---HHHcCCCHHHHHHH-----HHHH--H--HHHHHHHHhcCCCH
Confidence 222222222 21 1111 23333444554 88899988766442 1000 0 00111111 23333
Q ss_pred hhHhhhhcCCCccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhc
Q 012547 360 LDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIM 419 (461)
Q Consensus 360 ~~~~~~~~~~~~vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~il~~ 419 (461)
.++.+.. +..|..+...+..+ ++.|+ + .|+.+++++.+..
T Consensus 215 ~~~~~~~----~~~~~~~~~~l~~l-~~~~~--------------~-~~~~~a~~~~~~~ 254 (263)
T 1yqg_A 215 EKLQKNV----TSKGGTTHEAVEAF-RRHRV--------------A-EAISEGVCACVRR 254 (263)
T ss_dssp HHHHHHT----CCTTSHHHHHHHHH-HHTTH--------------H-HHHHHHHHHHHHH
T ss_pred HHHHHhc----CCCChhHHHHHHHH-HHCCH--------------H-HHHHHHHHHHHHH
Confidence 2222221 23454454445444 77884 6 7999999998764
No 52
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.68 E-value=4.1e-15 Score=144.12 Aligned_cols=239 Identities=14% Similarity=0.148 Sum_probs=150.3
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEec--CchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRR--PGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r--~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
|||+|||+|+||+++|..|+++ | ++|++|+| +++.++.+ .+
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~-g-----~~V~~~~~~~~~~~~~~~---------~~---------------------- 43 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSR-G-----VEVVTSLEGRSPSTIERA---------RT---------------------- 43 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-T-----CEEEECCTTCCHHHHHHH---------HH----------------------
T ss_pred CeEEEEechHHHHHHHHHHHHC-C-----CeEEEeCCccCHHHHHHH---------HH----------------------
Confidence 6999999999999999999998 8 89999988 33332210 00
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecCc
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~ 201 (461)
. ++. ++++++++++|+||+|||++...+.+.++.+.++ + ++|++ +++.
T Consensus 44 ------------~------------g~~--~~~~~~~~~aDvvi~~v~~~~~~~~~~~~~~~~~----~-~vi~~-s~~~ 91 (264)
T 1i36_A 44 ------------V------------GVT--ETSEEDVYSCPVVISAVTPGVALGAARRAGRHVR----G-IYVDI-NNIS 91 (264)
T ss_dssp ------------H------------TCE--ECCHHHHHTSSEEEECSCGGGHHHHHHHHHTTCC----S-EEEEC-SCCC
T ss_pred ------------C------------CCc--CCHHHHHhcCCEEEEECCCHHHHHHHHHHHHhcC----c-EEEEc-cCCC
Confidence 0 223 5566778899999999999865555666766543 4 66665 4655
Q ss_pred cccccccccCCHHHHHHhHhCCCC-CcEEEEeCcchhHhhhccCceEEEEeCChhHHHHHHHHhcCCCceEEecC-ChHH
Q 012547 202 AELEAVPRIITPTQMINRATGVPI-ENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNG-DLVT 279 (461)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~-~~v~vlsGPn~a~ev~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~v~~s~-Di~g 279 (461)
+.. .+.+.+.++... ....+..+|..+. .+.+ +++++++. +.+++ |+..|.+++... ++-.
T Consensus 92 ~~~---------~~~l~~~~~~~g~~~~~v~~~~~~~~---~g~~--~~~~g~~~--~~~~~-l~~~g~~~~~~~~~~g~ 154 (264)
T 1i36_A 92 PET---------VRMASSLIEKGGFVDAAIMGSVRRKG---ADIR--IIASGRDA--EEFMK-LNRYGLNIEVRGREPGD 154 (264)
T ss_dssp HHH---------HHHHHHHCSSSEEEEEEECSCHHHHG---GGCE--EEEESTTH--HHHHG-GGGGTCEEEECSSSTTH
T ss_pred HHH---------HHHHHHHHhhCCeeeeeeeCCccccc---cCCe--EEecCCcH--HHhhh-HHHcCCeeEECCCCcCH
Confidence 431 134666654211 0122344454333 4443 34444433 78888 999998865544 4555
Q ss_pred HHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhhccC--hhh-hhhhhcc--ccchhHHHHHHh
Q 012547 280 HEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP--LLA-DTYVTLL--KGRNAWYGQELA 354 (461)
Q Consensus 280 ve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g~--glg-Dl~~T~~--~sRN~~~G~~l~ 354 (461)
..|.+..-|.+. ..+..++.|+..+++++|.+++.+..+ ..| ++..++. .+|++..|.
T Consensus 155 ~~~~kl~~n~~~--------------~~~~~~~~Ea~~la~~~G~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~--- 217 (264)
T 1i36_A 155 ASAIKMLRSSYT--------------KGVSALLWETLTAAHRLGLEEDVLEMLEYTEGNDFRESAISRLKSSCIHAR--- 217 (264)
T ss_dssp HHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHTTCHHHHHHHHHTTSCSSTHHHHHHHHHHHHHTHH---
T ss_pred HHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHcCCcHHHHHHHHHhcCccHHHHHHHHhcCCCCcch---
Confidence 677766666532 345678999999999999987633111 112 2222211 122222211
Q ss_pred cCCChhhHhhhhcCCCccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHhc
Q 012547 355 KGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIM 419 (461)
Q Consensus 355 ~g~~~~~~~~~~~~~~~vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~il~~ 419 (461)
+ ++...+.++++++++ + + +|+++++|+++..
T Consensus 218 ----------------~--~~~~~~~~~~~a~~~-v--------------~-~p~~~~v~~~~~~ 248 (264)
T 1i36_A 218 ----------------R--RYEEMKEVQDMLAEV-I--------------D-PVMPTCIIRIFDK 248 (264)
T ss_dssp ----------------H--HHHHHHHHHHHHHTT-S--------------C-CSHHHHHHHHHHH
T ss_pred ----------------h--hHHHHHHHHHHHHHh-c--------------C-chHHHHHHHHHHH
Confidence 1 456667889999999 8 5 8999999999874
No 53
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=99.67 E-value=6.8e-16 Score=159.88 Aligned_cols=211 Identities=14% Similarity=0.073 Sum_probs=147.0
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhccC
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (461)
|||+|||+|+||+.+|..|++ | ++|++|+|++++++.+++.+. +.+.++..
T Consensus 1 MkI~VIG~G~vG~~~A~~La~--G-----~~V~~~d~~~~~~~~l~~~~~-----------------~i~e~~l~----- 51 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL--Q-----NEVTIVDILPSKVDKINNGLS-----------------PIQDEYIE----- 51 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT--T-----SEEEEECSCHHHHHHHHTTCC-----------------SSCCHHHH-----
T ss_pred CEEEEECCCHHHHHHHHHHhC--C-----CEEEEEECCHHHHHHHHcCCC-----------------CcCCCCHH-----
Confidence 799999999999999999996 5 899999999988776432210 11111110
Q ss_pred CccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch-----------hHHHHHHHHHHHhhccCCCCE
Q 012547 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-----------ETKEVFEEISRYWKERITVPV 192 (461)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~-----------~~~~vl~~i~~~l~~~~~~~i 192 (461)
++++.. ...+.+++|++++++++|+||+|||+. +++++++.+.+ +++ +++
T Consensus 52 ------~~~~~~---------~~~l~~t~~~~~~~~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~---~~i 112 (402)
T 1dlj_A 52 ------YYLKSK---------QLSIKATLDSKAAYKEAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNS---HAT 112 (402)
T ss_dssp ------HHHHHS---------CCCEEEESCHHHHHHHCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCS---SCE
T ss_pred ------HHHHhc---------cCcEEEeCCHHHHhcCCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCC---CCE
Confidence 111110 014678889888889999999999987 69999999999 876 677
Q ss_pred EEE-EeecCccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhc----cCceEEEEeCCh-------hHHHHH
Q 012547 193 IIS-LAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYN----KEYANARICGAE-------KWRKPL 260 (461)
Q Consensus 193 IIs-~tkGi~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~----g~~~~~~~~~~~-------~~~~~l 260 (461)
||. .+++.... +.+.+.++. . .+.++|.+..+... ..+..+++++.+ +.++.+
T Consensus 113 VV~~ST~~~g~~-----------~~l~~~~~~--~--~v~~~Pe~~~~G~a~~~~~~~~riviG~~~~~~~~~~~~~~~~ 177 (402)
T 1dlj_A 113 LIIKSTIPIGFI-----------TEMRQKFQT--D--RIIFSPEFLRESKALYDNLYPSRIIVSCEENDSPKVKADAEKF 177 (402)
T ss_dssp EEECSCCCTTHH-----------HHHHHHTTC--S--CEEECCCCCCTTSTTHHHHSCSCEEEECCTTSCHHHHHHHHHH
T ss_pred EEEeCCCCccHH-----------HHHHHHhCC--C--eEEECCccccCcchhhcccCCCEEEEeCCCcccchhHHHHHHH
Confidence 765 45444332 456666653 2 35688887655431 123334555544 667888
Q ss_pred HHHhcCCCce---EEecCChHHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhhcc
Q 012547 261 AKFLRRPHFT---VWDNGDLVTHEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAG 331 (461)
Q Consensus 261 ~~ll~~~g~~---v~~s~Di~gve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g 331 (461)
.++|...+++ ++...|+...||.+++.|.+- +.....++|+..+|+++|.+++++..
T Consensus 178 ~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~--------------a~~ia~~nE~~~l~~~~Gid~~~v~~ 237 (402)
T 1dlj_A 178 ALLLKSAAKKNNVPVLIMGASEAEAVKLFANTYL--------------ALRVAYFNELDTYAESRKLNSHMIIQ 237 (402)
T ss_dssp HHHHHHHCSCSCCCEEEECHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHhhhhccCCceEEecChHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 8999765554 566788999999999999841 23335789999999999999877654
No 54
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=99.67 E-value=1.4e-15 Score=158.77 Aligned_cols=212 Identities=15% Similarity=0.153 Sum_probs=149.7
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
.+|||+|||+|+||+++|..|++ | ++|++|++++++++.++ ++ .++.+.+++.
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~--G-----~~V~~~D~~~~~v~~l~---------~g--------~~~i~e~~l~--- 87 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ--N-----HEVVALDIVQAKVDMLN---------QK--------ISPIVDKEIQ--- 87 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT--T-----SEEEEECSCHHHHHHHH---------TT--------CCSSCCHHHH---
T ss_pred CCCEEEEECcCHHHHHHHHHHHc--C-----CeEEEEecCHHHhhHHh---------cc--------CCccccccHH---
Confidence 45899999999999999999985 5 99999999998877643 22 1344555432
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch-----------hHHHHHHHHHHHhhccCCC
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-----------ETKEVFEEISRYWKERITV 190 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~-----------~~~~vl~~i~~~l~~~~~~ 190 (461)
+++.++ ..++.+++|+++++++||+||+|||+. +++++++.+.+ +++ +
T Consensus 88 --------~ll~~~---------~~~l~~ttd~~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~---g 146 (432)
T 3pid_A 88 --------EYLAEK---------PLNFRATTDKHDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INP---N 146 (432)
T ss_dssp --------HHHHHS---------CCCEEEESCHHHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCT---T
T ss_pred --------HHHhhc---------cCCeEEEcCHHHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCC---C
Confidence 122211 025789999999999999999999985 68999999999 877 6
Q ss_pred CEEEEEeecCccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhc----cCceEEEEeCChhHHHHHHHHhcC
Q 012547 191 PVIISLAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYN----KEYANARICGAEKWRKPLAKFLRR 266 (461)
Q Consensus 191 ~iIIs~tkGi~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~----g~~~~~~~~~~~~~~~~l~~ll~~ 266 (461)
++|| ...++.+.+ .+.+.+.++. . .+.+.|.+..+... -.+..++++++++.++.+..+|..
T Consensus 147 ~iVV-~~STv~pgt---------t~~l~~~l~~--~--~v~~sPe~~~~G~A~~~~l~p~rIvvG~~~~~~~~~~~ll~~ 212 (432)
T 3pid_A 147 AVMI-IKSTIPVGF---------TRDIKERLGI--D--NVIFSPEFLREGRALYDNLHPSRIVIGERSARAERFADLLKE 212 (432)
T ss_dssp SEEE-ECSCCCTTH---------HHHHHHHHTC--C--CEEECCCCCCTTSHHHHHHSCSCEEESSCSHHHHHHHHHHHH
T ss_pred cEEE-EeCCCChHH---------HHHHHHHHhh--c--cEeecCccCCcchhhhcccCCceEEecCCHHHHHHHHHHHHh
Confidence 7666 444677652 2344555542 1 24568888665442 224445677777778888888864
Q ss_pred C----CceEEecCChHHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhhc
Q 012547 267 P----HFTVWDNGDLVTHEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLA 330 (461)
Q Consensus 267 ~----g~~v~~s~Di~gve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~ 330 (461)
. +.++.. .|+...|+.+++-|.+- +.....++|+..+|+++|.|++.+.
T Consensus 213 ~~~~~~~~v~~-~~~~~AE~~Kl~~N~~~--------------a~~Ia~~nEl~~lae~~GiD~~~v~ 265 (432)
T 3pid_A 213 GAIKQDIPTLF-TDSTEAEAIKLFANTYL--------------ALRVAYFNELDSYAESQGLNSKQII 265 (432)
T ss_dssp HCSSSSCCEEE-CCHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred hhccCCCeEEe-cCccHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 2 234444 57888899988887731 3334578999999999999887654
No 55
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.67 E-value=1.2e-15 Score=152.08 Aligned_cols=257 Identities=16% Similarity=0.175 Sum_probs=157.7
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhccC
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (461)
.||+|||.|.||..||..|+++ | |+|++|+|++++++.+ ..
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~-G-----~~V~v~dr~~~~~~~l--------------------------~~------- 46 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA-G-----YELVVWNRTASKAEPL--------------------------TK------- 46 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-T-----CEEEEC-------CTT--------------------------TT-------
T ss_pred CcEEEEecHHHHHHHHHHHHHC-C-----CeEEEEeCCHHHHHHH--------------------------HH-------
Confidence 4899999999999999999999 8 9999999998765431 10
Q ss_pred CccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch-hHHHHH-HHHHHHhhccCCCCEEEEEeecCc
Q 012547 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGVE 201 (461)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~-~~~~vl-~~i~~~l~~~~~~~iIIs~tkGi~ 201 (461)
.+....+++.++++++|+||+++|.. .+++++ ..+.+.+.+ ++++|.++ .+.
T Consensus 47 ----------------------~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~~~~~---~~iiid~s-T~~ 100 (297)
T 4gbj_A 47 ----------------------LGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVEKLGK---DGVHVSMS-TIS 100 (297)
T ss_dssp ----------------------TTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHHHHCT---TCEEEECS-CCC
T ss_pred ----------------------cCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHhhcCC---CeEEEECC-CCC
Confidence 13456778889999999999999965 455554 557777776 67777766 344
Q ss_pred cccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEeCChhHHHHHHHHhcCCCceEEecCChHH-H
Q 012547 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVT-H 280 (461)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~v~~s~Di~g-v 280 (461)
+.. ...+.+.+.+ .|.......+..||..+. .|..+ ++++++++..++++.+|+.-+-+++...+..| -
T Consensus 101 p~~-----~~~~~~~~~~-~g~~~ldapVsGg~~~a~---~g~l~-im~gG~~~~~~~~~~~l~~~g~~i~~~g~~~G~g 170 (297)
T 4gbj_A 101 PET-----SRQLAQVHEW-YGAHYVGAPIFARPEAVR---AKVGN-ICLSGNAGAKERIKPIVENFVKGVFDFGDDPGAA 170 (297)
T ss_dssp HHH-----HHHHHHHHHH-TTCEEEECCEECCHHHHH---HTCCE-EEEEECHHHHHHHHHHHHTTCSEEEECCSCTTHH
T ss_pred hHH-----HHHHHHHHHh-cCCceecCCcCCCccccc---cccce-eecccchhHHHHHHHHHHHhhCCeEEecCCccHH
Confidence 441 2222333322 121111112334444433 33322 35678888899999999999988877665433 3
Q ss_pred HHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhhccC---hhhhhhhhccccchhHHHHHHhcCC
Q 012547 281 EVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP---LLADTYVTLLKGRNAWYGQELAKGR 357 (461)
Q Consensus 281 e~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g~---glgDl~~T~~~sRN~~~G~~l~~g~ 357 (461)
+..+++-|. -......++.|...+++++|.+++++.+. +.+..... + .++..+..+.
T Consensus 171 ~~~Kl~~N~--------------~~~~~~~~~aEa~~la~~~Gld~~~~~~~l~~~~~~s~~~----~--~~~~~~~~~~ 230 (297)
T 4gbj_A 171 NVIKLAGNF--------------MIACSLEMMGEAFTMAEKNGISRQSIYEMLTSTLFAAPIF----Q--NYGKLVASNT 230 (297)
T ss_dssp HHHHHHHHH--------------HHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTTTCSHHH----H--HHHHHHHHTC
T ss_pred HHHHHHHHH--------------HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcccCchh----h--ccCccccCCC
Confidence 444444444 22344568899999999999999987642 22211111 1 1222332221
Q ss_pred ChhhHhhhhcCCC-cc-chHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHh
Q 012547 358 LTLDLGDSIKGKG-MI-QGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILI 418 (461)
Q Consensus 358 ~~~~~~~~~~~~~-~v-EG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~il~ 418 (461)
- ...+ ++ -.....+.+.+++++.|+ + +|+.+.+++++.
T Consensus 231 ~--------~p~~f~~~l~~KDl~l~~~~A~~~g~--------------~-~p~~~~~~~~~~ 270 (297)
T 4gbj_A 231 Y--------EPVAFRFPLGLKDINLTLQTASDVNA--------------P-MPFADIIRNRFI 270 (297)
T ss_dssp C--------CSCSSBHHHHHHHHHHHHHHHHHTTC--------------C-CHHHHHHHHHHH
T ss_pred C--------CCccchhHHHHHHHHHHHHHHHHhCC--------------C-ChHHHHHHHHHH
Confidence 0 0000 11 234556678999999995 6 899999888764
No 56
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.66 E-value=1.6e-15 Score=151.34 Aligned_cols=201 Identities=15% Similarity=0.160 Sum_probs=135.8
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
.|+||++||.|.||..||..|.++ | |+|++|+|++++++.+.+
T Consensus 2 ~M~kIgfIGlG~MG~~mA~~L~~~-G-----~~v~v~dr~~~~~~~l~~------------------------------- 44 (300)
T 3obb_A 2 HMKQIAFIGLGHMGAPMATNLLKA-G-----YLLNVFDLVQSAVDGLVA------------------------------- 44 (300)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHT-T-----CEEEEECSSHHHHHHHHH-------------------------------
T ss_pred CcCEEEEeeehHHHHHHHHHHHhC-C-----CeEEEEcCCHHHHHHHHH-------------------------------
Confidence 456999999999999999999999 8 999999999876653110
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCc-hhHHHHHHH---HHHHhhccCCCCEEEEEe
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-TETKEVFEE---ISRYWKERITVPVIISLA 197 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps-~~~~~vl~~---i~~~l~~~~~~~iIIs~t 197 (461)
.+.....+++++++.+|+||+|+|. .++++++.. +.+.+.+ ++++|.++
T Consensus 45 ------------------------~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~~~~~~~---g~iiId~s 97 (300)
T 3obb_A 45 ------------------------AGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAP---GTLVLECS 97 (300)
T ss_dssp ------------------------TTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSSTTSCCC----CEEEECS
T ss_pred ------------------------cCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhhhhcCCC---CCEEEECC
Confidence 0345678899999999999999996 578888755 4455555 67888776
Q ss_pred ecCccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEeCChhHHHHHHHHhcCCCceEEecCCh
Q 012547 198 KGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDL 277 (461)
Q Consensus 198 kGi~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~v~~s~Di 277 (461)
. +.++. ...+.+.+.+ .|.......+..||.-|. .|..+ ++++++++..++++.+|+.-+-++++..+.
T Consensus 98 T-~~p~~-----~~~~a~~~~~-~G~~~lDaPVsGg~~~A~---~G~L~-imvGG~~~~~~~~~p~l~~~g~~i~~~G~~ 166 (300)
T 3obb_A 98 T-IAPTS-----ARKIHAAARE-RGLAMLDAPVSGGTAGAA---AGTLT-FMVGGDAEALEKARPLFEAMGRNIFHAGPD 166 (300)
T ss_dssp C-CCHHH-----HHHHHHHHHT-TTCEEEECCEESCHHHHH---HTCEE-EEEESCHHHHHHHHHHHHHHEEEEEEEEST
T ss_pred C-CCHHH-----HHHHHHHHHH-cCCEEEecCCCCCHHHHH---hCCEE-EEEeCCHHHHHHHHHHHHHhCCCEEEeCCc
Confidence 3 44431 1222222222 121111112445555554 34333 356888888999999998888777777665
Q ss_pred HHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhhcc
Q 012547 278 VTHEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAG 331 (461)
Q Consensus 278 ~gve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g 331 (461)
-.-...+++-|.+ ......++.|...++++.|.+++.+.+
T Consensus 167 G~g~~~Kl~~N~l--------------~~~~~~a~aEa~~la~~~Gld~~~~~~ 206 (300)
T 3obb_A 167 GAGQVAKVCNNQL--------------LAVLMIGTAEAMALGVANGLEAKVLAE 206 (300)
T ss_dssp THHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred cHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 3334455444442 233446889999999999999988754
No 57
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.65 E-value=2.1e-15 Score=142.49 Aligned_cols=169 Identities=14% Similarity=0.180 Sum_probs=127.2
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
..|||+|||+|+||+++|..|+++ | ++|++|+|+++
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~-g-----~~V~~~~~~~~-------------------------------------- 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIA-G-----HEVTYYGSKDQ-------------------------------------- 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECTTCC--------------------------------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-C-----CEEEEEcCCHH--------------------------------------
Confidence 347999999999999999999998 8 89999977631
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecCc
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~ 201 (461)
++++||+||+|||+++++++++++.++++ +++++++++|++
T Consensus 54 -----------------------------------~~~~aD~vi~av~~~~~~~v~~~l~~~~~----~~~vi~~~~g~~ 94 (209)
T 2raf_A 54 -----------------------------------ATTLGEIVIMAVPYPALAALAKQYATQLK----GKIVVDITNPLN 94 (209)
T ss_dssp -----------------------------------CSSCCSEEEECSCHHHHHHHHHHTHHHHT----TSEEEECCCCBC
T ss_pred -----------------------------------HhccCCEEEEcCCcHHHHHHHHHHHHhcC----CCEEEEECCCCC
Confidence 24578999999999999999999988776 479999999997
Q ss_pred -ccccc--ccccCCHHHHHHhHhCCCCCcEE----EEeCcchhHhhhcc-CceEEEE-eCChhHHHHHHHHhcCCCceEE
Q 012547 202 -AELEA--VPRIITPTQMINRATGVPIENIL----YLGGPNIASEIYNK-EYANARI-CGAEKWRKPLAKFLRRPHFTVW 272 (461)
Q Consensus 202 -~~~~~--~~~~~~~se~i~~~lg~~~~~v~----vlsGPn~a~ev~~g-~~~~~~~-~~~~~~~~~l~~ll~~~g~~v~ 272 (461)
..... .++...+++.+++.++. .++. .++||+++.+...+ .+..+.+ +.+++..+.++++|+..|++++
T Consensus 95 ~~~~~~l~~~~~~~~~~~l~~~l~~--~~vv~~~~~~~~p~~~~~~~~g~~~~~~~~~g~~~~~~~~v~~ll~~~G~~~~ 172 (209)
T 2raf_A 95 FDTWDDLVVPADSSAAQELQQQLPD--SQVLKAFNTTFAATLQSGQVNGKEPTTVLVAGNDDSAKQRFTRALADSPLEVK 172 (209)
T ss_dssp TTTSSSBSSCTTCCHHHHHHHHCTT--SEEEECSTTSCHHHHHHSEETTTEECEEEEEESCHHHHHHHHHHTTTSSCEEE
T ss_pred ccccccccCCCCCcHHHHHHHHCCC--CcEEEeeecccHhhccccccCCCCCceeEEcCCCHHHHHHHHHHHHHcCCceE
Confidence 32000 00234567888887752 2321 12389999877655 2333334 4456788999999999999999
Q ss_pred ecCChHHHHHHHHHHHHHHHHHhhcc
Q 012547 273 DNGDLVTHEVMGGLKNVYAIGAALTN 298 (461)
Q Consensus 273 ~s~Di~gve~~galKNv~Ai~~Gi~~ 298 (461)
...| ++.+..+||+.+++++++.
T Consensus 173 ~~~~---i~~a~~~K~i~~l~~~~~~ 195 (209)
T 2raf_A 173 DAGK---LKRARELEAMGFMQMTLAA 195 (209)
T ss_dssp EEES---GGGHHHHHHHHHHHHHHHH
T ss_pred eCCC---HhHHHHhcchHHHHHHHHH
Confidence 8888 4567788999999888875
No 58
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.65 E-value=1.8e-15 Score=159.65 Aligned_cols=226 Identities=13% Similarity=0.110 Sum_probs=153.0
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
.+|||+|||+|+||+++|..|+++ | ++++|++|+|++++++.++ +++ .+.+.+++.
T Consensus 4 ~~mkI~VIG~G~mG~~lA~~La~~-g---~G~~V~~~d~~~~~~~~l~---------~g~--------~~i~e~~l~--- 59 (467)
T 2q3e_A 4 EIKKICCIGAGYVGGPTCSVIAHM-C---PEIRVTVVDVNESRINAWN---------SPT--------LPIYEPGLK--- 59 (467)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHH-C---TTSEEEEECSCHHHHHHHT---------SSS--------CSSCCTTHH---
T ss_pred CccEEEEECCCHHHHHHHHHHHhc-C---CCCEEEEEECCHHHHHHHh---------CCC--------CCcCCCCHH---
Confidence 358999999999999999999987 4 1289999999998776533 221 233333321
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchh---------------HHHHHHHHHHHhhc
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE---------------TKEVFEEISRYWKE 186 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~---------------~~~vl~~i~~~l~~ 186 (461)
+++.++. ..++.+++|+++++++||+||+|||+.. +.++++++.+++++
T Consensus 60 --------~~~~~~~--------~~~~~~t~~~~e~~~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~ 123 (467)
T 2q3e_A 60 --------EVVESCR--------GKNLFFSTNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNG 123 (467)
T ss_dssp --------HHHHHHB--------TTTEEEESCHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCS
T ss_pred --------HHHHHhh--------cCCEEEECCHHHHHhcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCC
Confidence 1111100 0147788999888999999999998533 67888999988876
Q ss_pred cCCCCEEEEEeecCccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhc----cCceEEEEeC-----ChhHH
Q 012547 187 RITVPVIISLAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYN----KEYANARICG-----AEKWR 257 (461)
Q Consensus 187 ~~~~~iIIs~tkGi~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~----g~~~~~~~~~-----~~~~~ 257 (461)
+++||..+ ++.+. +...+.+.+.+. +.....+.+.++|.++.+... ..+..+++++ +++..
T Consensus 124 ---g~iVV~~S-Tv~~g-----~~~~l~~~l~~~-~~~~~d~~V~~~Pe~~~~G~~~~d~~~~~rivvGg~~~~~~~~~~ 193 (467)
T 2q3e_A 124 ---YKIVTEKS-TVPVR-----AAESIRRIFDAN-TKPNLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAV 193 (467)
T ss_dssp ---EEEEEECS-CCCTT-----HHHHHHHHHHHT-CCTTCEEEEEECCCCCCTTSHHHHHHSCSCEEEECCSSHHHHHHH
T ss_pred ---CCEEEECC-cCCch-----HHHHHHHHHHHh-CCCCCCeEEEeCHHHhhcccchhhccCCCEEEECCCCCCCCHHHH
Confidence 56666544 44444 122234444442 211234567899998765432 1233344554 45678
Q ss_pred HHHHHHhcCC-CceEEecCChHHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhhcc
Q 012547 258 KPLAKFLRRP-HFTVWDNGDLVTHEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAG 331 (461)
Q Consensus 258 ~~l~~ll~~~-g~~v~~s~Di~gve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g 331 (461)
+.++++|+.. +..+....|+...||.|.+-|.+ .++....++|+..+|+++|.+++++.+
T Consensus 194 ~~~~~l~~~~~g~~~~~~~~~~~ae~~Kl~~N~~--------------~a~~ia~~nE~~~l~~~~Gid~~~v~~ 254 (467)
T 2q3e_A 194 QALCAVYEHWVPREKILTTNTWSSELSKLAANAF--------------LAQRISSINSISALCEATGADVEEVAT 254 (467)
T ss_dssp HHHHHHHTTTSCGGGEEEECHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHTCCHHHHHH
T ss_pred HHHHHHHHHhccCCeEEecCHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHhCcCHHHHHH
Confidence 8999999887 65566667888889999888873 134456889999999999999887654
No 59
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=99.65 E-value=9.9e-15 Score=152.59 Aligned_cols=241 Identities=15% Similarity=0.107 Sum_probs=157.2
Q ss_pred ccCcccccccchhHHhhHHHHHhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhh
Q 012547 13 SSNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEH 92 (461)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~ 92 (461)
||.-+-|||+|-+- ....+.+|+|||+|++|..+|..||+. | ++|+.+|.++++++.+|
T Consensus 3 ~~~~~~~~~~~~~p------------~~~~m~~IaViGlGYVGLp~A~~~A~~-G-----~~V~g~Did~~kV~~ln--- 61 (444)
T 3vtf_A 3 SSHHHHHHSSGLVP------------RGSHMASLSVLGLGYVGVVHAVGFALL-G-----HRVVGYDVNPSIVERLR--- 61 (444)
T ss_dssp ----------CCCC------------TTCCCCEEEEECCSHHHHHHHHHHHHH-T-----CEEEEECSCHHHHHHHH---
T ss_pred cccccccccCCcCC------------CCCCCCEEEEEccCHHHHHHHHHHHhC-C-----CcEEEEECCHHHHHHHH---
Confidence 56677888888653 122456999999999999999999999 8 99999999999887643
Q ss_pred HHHHHhhhhhhHHhhhhcccccchhhhhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCc--
Q 012547 93 LFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-- 170 (461)
Q Consensus 93 l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps-- 170 (461)
++. .+.+.|++. |++.+.+.. .++.+++|.++++++||++|+|||.
T Consensus 62 ------~G~--------~pi~Epgl~-----------ell~~~~~~-------g~l~~tt~~~~ai~~ad~~~I~VpTP~ 109 (444)
T 3vtf_A 62 ------AGR--------PHIYEPGLE-----------EALGRALSS-------GRLSFAESAEEAVAATDATFIAVGTPP 109 (444)
T ss_dssp ------TTC--------CSSCCTTHH-----------HHHHHHHHT-------TCEEECSSHHHHHHTSSEEEECCCCCB
T ss_pred ------CCC--------CCCCCCCHH-----------HHHHHHHHc-------CCeeEEcCHHHHHhcCCceEEEecCCC
Confidence 332 344555432 333332211 2688999999999999999999974
Q ss_pred --------hhHHHHHHHHHHHhhccCCCCEEEEEeecCccccccccccCCH-HHHHHhHhCCCCCcEEEEeCcchhHhhh
Q 012547 171 --------TETKEVFEEISRYWKERITVPVIISLAKGVEAELEAVPRIITP-TQMINRATGVPIENILYLGGPNIASEIY 241 (461)
Q Consensus 171 --------~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~~~~~~~~~~~~~-se~i~~~lg~~~~~v~vlsGPn~a~ev~ 241 (461)
.+++++++.|.+++++..++++|| .-..+.+. +...+ ...+.+..+ ...+.+.+.|.+..+..
T Consensus 110 ~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV-~eSTVppG-----tte~~~~~~l~~~~~--~~~f~v~~~PErl~eG~ 181 (444)
T 3vtf_A 110 APDGSADLRYVEAAARAVGRGIRAKGRWHLVV-VKSTVPPG-----TTEGLVARAVAEEAG--GVKFSVASNPEFLREGS 181 (444)
T ss_dssp CTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEE-ECSCCCTT-----TTTTHHHHHHHTTTT--TCCCEEEECCCCCCTTS
T ss_pred CCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEE-EeCCCCCc-----hHHHHHHHHHHHhCC--CCCceeecCcccccCCc
Confidence 378999999999886421134443 44455555 33433 334444333 24567889999987654
Q ss_pred c----cCceEEEEe-CChhHHHHHHHHhcCCCceEEecCChHHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHH
Q 012547 242 N----KEYANARIC-GAEKWRKPLAKFLRRPHFTVWDNGDLVTHEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMV 316 (461)
Q Consensus 242 ~----g~~~~~~~~-~~~~~~~~l~~ll~~~g~~v~~s~Di~gve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~ 316 (461)
. ..+..++++ .++...+.+.+++....-.+. ..|+...|+.+.+-|.+ ++.-+ ..++|+.
T Consensus 182 a~~d~~~~~riViG~~~~~a~~~~~~ly~~~~~~~~-~~~~~~AE~~Kl~eN~~-------------ravnI-a~~NEla 246 (444)
T 3vtf_A 182 ALEDFFKPDRIVIGAGDERAASFLLDVYKAVDAPKL-VMKPREAELVKYASNVF-------------LALKI-SFANEVG 246 (444)
T ss_dssp HHHHHHSCSCEEEEESSHHHHHHHHHHTTTSCSCEE-EECHHHHHHHHHHHHHH-------------HHHHH-HHHHHHH
T ss_pred cccccccCCcEEEcCCCHHHHHHHHHHHhccCCCEE-EechhHHHHHHHHHHHH-------------HHHHH-HHHHHHH
Confidence 2 123444554 455667888888876554443 46788999999888872 21222 3579999
Q ss_pred HHHHHhCCCchhh
Q 012547 317 FITHLLAEEPEKL 329 (461)
Q Consensus 317 ~l~~a~G~~~~t~ 329 (461)
.+|+++|+|...+
T Consensus 247 ~ice~~GiDv~eV 259 (444)
T 3vtf_A 247 LLAKRLGVDTYRV 259 (444)
T ss_dssp HHHHHTTCCHHHH
T ss_pred HHHHHcCCCHHHH
Confidence 9999999986544
No 60
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.63 E-value=4.1e-15 Score=157.41 Aligned_cols=276 Identities=13% Similarity=0.056 Sum_probs=165.4
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
.+|+|+|||+|.||++||..|+++ | ++|++|+|++++++.+.++ + ..+
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~-G-----~~V~v~dr~~~~~~~l~~~--------g-------------~~g----- 50 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDH-G-----FVVCAFNRTVSKVDDFLAN--------E-------------AKG----- 50 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSTHHHHHHHHT--------T-------------TTT-----
T ss_pred CCCEEEEEChhHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHHhc--------c-------------cCC-----
Confidence 458999999999999999999999 8 9999999999876642211 0 000
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhc---CCCEEEEcCCc-hhHHHHHHHHHHHhhccCCCCEEEEEe
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW---DADIVINGLPS-TETKEVFEEISRYWKERITVPVIISLA 197 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~---~aDiIIiaVps-~~~~~vl~~i~~~l~~~~~~~iIIs~t 197 (461)
..+..+++++++++ ++|+||++||+ +.++++++++.+++++ +++||.++
T Consensus 51 ------------------------~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~vl~~l~~~L~~---g~iIId~s 103 (484)
T 4gwg_A 51 ------------------------TKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVDDFIEKLVPLLDT---GDIIIDGG 103 (484)
T ss_dssp ------------------------SSCEECSSHHHHHHTBCSSCEEEECSCSSHHHHHHHHHHGGGCCT---TCEEEECS
T ss_pred ------------------------CceeccCCHHHHHhhccCCCEEEEecCChHHHHHHHHHHHHhcCC---CCEEEEcC
Confidence 13455678888776 59999999998 5899999999999887 78999988
Q ss_pred ecCccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEeCChhHHHHHHHHhcCCCceEEecCCh
Q 012547 198 KGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDL 277 (461)
Q Consensus 198 kGi~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~v~~s~Di 277 (461)
++....+ ....+.+.+ .|.......+..||..+. .|. .++++++++..+.++.+|+..+.++ .+|.
T Consensus 104 t~~~~~t------~~~~~~l~~-~Gi~fvd~pVsGg~~gA~---~G~--~im~GG~~ea~~~v~pll~~ig~~v--~~~~ 169 (484)
T 4gwg_A 104 NSEYRDT------TRRCRDLKA-KGILFVGSGVSGGEEGAR---YGP--SLMPGGNKEAWPHIKTIFQGIAAKV--GTGE 169 (484)
T ss_dssp CCCHHHH------HHHHHHHHH-TTCEEEEEEEESHHHHHH---HCC--EEEEEECGGGHHHHHHHHHHHSCBC--TTSC
T ss_pred CCCchHH------HHHHHHHHh-hccccccCCccCCHHHHh---cCC--eeecCCCHHHHHHHHHHHHHhcCcc--cCCC
Confidence 8765442 112222322 132111223344455443 343 4456778888888999887655433 1121
Q ss_pred HHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHH-hCCCchhhccC-h-hhhhhhhccccchhHHHHHHh
Q 012547 278 VTHEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHL-LAEEPEKLAGP-L-LADTYVTLLKGRNAWYGQELA 354 (461)
Q Consensus 278 ~gve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a-~G~~~~t~~g~-g-lgDl~~T~~~sRN~~~G~~l~ 354 (461)
.++.++|-. --+-...++ .|.....+.++++|+..+++. +|.+++++.+. . |..-...+...+|+. ..+.
T Consensus 170 ~~~~~~G~~--Gag~~vKmv---~N~i~~~~m~~iaEa~~l~~~~~Gld~~~l~~v~~~w~~G~~~S~l~e~~~--~~l~ 242 (484)
T 4gwg_A 170 PCCDWVGDE--GAGHFVKMV---HNGIEYGDMQLICEAYHLMKDVLGMAQDEMAQAFEDWNKTELDSFLIEITA--NILK 242 (484)
T ss_dssp BSBCCCEET--THHHHHHHH---HHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHTTTTTCBHHHHHHH--HHHH
T ss_pred ceEEEECCc--cHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHcCCCccchHHHHHH--HHHh
Confidence 121121100 001111222 233334556789999999999 99999877542 1 100011111233433 2333
Q ss_pred c----CC-ChhhHhhhhcCCCccchHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCc-HHHHHHHHHh
Q 012547 355 K----GR-LTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCP-ILKMLYKILI 418 (461)
Q Consensus 355 ~----g~-~~~~~~~~~~~~~~vEG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~P-i~~~ly~il~ 418 (461)
+ |. .++++.+.. ++.-||.-|+.. +.++| ++ +| |.++||.-+.
T Consensus 243 ~~D~~g~~~ld~i~d~~--~~kgtG~wt~~~----A~~~g--------------vp-~p~i~~av~~R~~ 291 (484)
T 4gwg_A 243 FQDTDGKHLLPKIRDSA--GQKGTGKWTAIS----ALEYG--------------VP-VTLIGEAVFARCL 291 (484)
T ss_dssp CBCTTSSBSGGGSCCCC--CSSCTTHHHHHH----HHHHT--------------CC-CHHHHHHHHHHHH
T ss_pred cCCccCCccHHHHhccc--cCcchHHHHHHH----HHHcC--------------CC-chHHHHHHHHHHH
Confidence 2 32 233343322 345688877655 44778 47 79 6777876443
No 61
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.63 E-value=3.4e-15 Score=141.91 Aligned_cols=178 Identities=14% Similarity=0.164 Sum_probs=126.0
Q ss_pred HHHhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEE-EecCchhhhhhhhhhHHHHHhhhhhhHHhhhhc
Q 012547 32 LRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRI-WRRPGRSVDRATAEHLFEVINSREDVLRRLIRR 110 (461)
Q Consensus 32 ~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l-~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n 110 (461)
.++++.|. +|||+|||+|+||+++|..|+++ | ++|++ |+|++++++.+.++
T Consensus 15 ~~~~~~m~---mmkI~IIG~G~mG~~la~~l~~~-g-----~~V~~v~~r~~~~~~~l~~~------------------- 66 (220)
T 4huj_A 15 TENLYFQS---MTTYAIIGAGAIGSALAERFTAA-Q-----IPAIIANSRGPASLSSVTDR------------------- 66 (220)
T ss_dssp --CTTGGG---SCCEEEEECHHHHHHHHHHHHHT-T-----CCEEEECTTCGGGGHHHHHH-------------------
T ss_pred ccchhhhc---CCEEEEECCCHHHHHHHHHHHhC-C-----CEEEEEECCCHHHHHHHHHH-------------------
Confidence 34555443 48999999999999999999999 8 89999 99998776542110
Q ss_pred ccccchhhhhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCC
Q 012547 111 CAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITV 190 (461)
Q Consensus 111 ~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~ 190 (461)
+ ++..+.+..+++.++|+||+|||++.++++++++.+ ++ +
T Consensus 67 --~---------------------------------g~~~~~~~~~~~~~aDvVilavp~~~~~~v~~~l~~-~~----~ 106 (220)
T 4huj_A 67 --F---------------------------------GASVKAVELKDALQADVVILAVPYDSIADIVTQVSD-WG----G 106 (220)
T ss_dssp --H---------------------------------TTTEEECCHHHHTTSSEEEEESCGGGHHHHHTTCSC-CT----T
T ss_pred --h---------------------------------CCCcccChHHHHhcCCEEEEeCChHHHHHHHHHhhc-cC----C
Confidence 0 011122334557899999999999999999999887 53 5
Q ss_pred CEEEEEeecCccccccc--cccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhc-cC-----ceEEEE-eCChhHHHHHH
Q 012547 191 PVIISLAKGVEAELEAV--PRIITPTQMINRATGVPIENILYLGGPNIASEIYN-KE-----YANARI-CGAEKWRKPLA 261 (461)
Q Consensus 191 ~iIIs~tkGi~~~~~~~--~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~-g~-----~~~~~~-~~~~~~~~~l~ 261 (461)
++||++++|++...... .+....++.+++.++. .+ ++...|++...+.. +. +..+++ +.+++..+.++
T Consensus 107 ~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~~--~~-vv~~~~~~~~~v~~~g~~~~~~~~~v~~~g~~~~~~~~v~ 183 (220)
T 4huj_A 107 QIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVPG--AK-VVKAFNTLPAAVLAADPDKGTGSRVLFLSGNHSDANRQVA 183 (220)
T ss_dssp CEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHSTT--CE-EEEESCSSCHHHHTSCSBCSSCEEEEEEEESCHHHHHHHH
T ss_pred CEEEEcCCCCCcccccccccCCCcHHHHHHHHCCC--CC-EEECCCCCCHHHhhhCcccCCCCeeEEEeCCCHHHHHHHH
Confidence 79999999996110000 0234567888888862 23 56778887766655 21 233333 55678889999
Q ss_pred HHhcCCCceEEecCChHHH
Q 012547 262 KFLRRPHFTVWDNGDLVTH 280 (461)
Q Consensus 262 ~ll~~~g~~v~~s~Di~gv 280 (461)
++|+..|++++...++...
T Consensus 184 ~l~~~~G~~~~~~G~l~~a 202 (220)
T 4huj_A 184 ELISSLGFAPVDLGTLAAS 202 (220)
T ss_dssp HHHHHTTCEEEECCSHHHH
T ss_pred HHHHHhCCCeEeeCChhhc
Confidence 9999999999998886544
No 62
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.60 E-value=3.2e-14 Score=145.35 Aligned_cols=190 Identities=13% Similarity=0.094 Sum_probs=127.2
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
+|||+|||+|.||..+|..|+++ | ++|++|+|++++++.+.+
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~-G-----~~V~v~dr~~~~~~~l~~-------------------------------- 63 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKG-G-----HECVVYDLNVNAVQALER-------------------------------- 63 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHT--------------------------------
T ss_pred CCEEEEECchHHHHHHHHHHHhC-C-----CEEEEEeCCHHHHHHHHH--------------------------------
Confidence 48999999999999999999999 8 999999999876553110
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCC---CEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeec
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDA---DIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~a---DiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkG 199 (461)
.++..+++++++++++ |+||+|||+..++++++++.+.+++ +++||.++++
T Consensus 64 -----------------------~g~~~~~s~~e~~~~a~~~DvVi~~vp~~~v~~vl~~l~~~l~~---g~iiId~st~ 117 (358)
T 4e21_A 64 -----------------------EGIAGARSIEEFCAKLVKPRVVWLMVPAAVVDSMLQRMTPLLAA---NDIVIDGGNS 117 (358)
T ss_dssp -----------------------TTCBCCSSHHHHHHHSCSSCEEEECSCGGGHHHHHHHHGGGCCT---TCEEEECSSC
T ss_pred -----------------------CCCEEeCCHHHHHhcCCCCCEEEEeCCHHHHHHHHHHHHhhCCC---CCEEEeCCCC
Confidence 0233456788888888 9999999999999999999998887 7888888766
Q ss_pred CccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEeCChhHHHHHHHHhcCCC-----------
Q 012547 200 VEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPH----------- 268 (461)
Q Consensus 200 i~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~~~~~~~~~l~~ll~~~g----------- 268 (461)
..... ..+.+.+.+ .+.......+..||..+. .|. .++++++++..+.++.+|...+
T Consensus 118 ~~~~~------~~~~~~l~~-~g~~~vdapVsGg~~~a~---~G~--~im~GG~~~a~~~~~~ll~~lg~~~~~~~~~~~ 185 (358)
T 4e21_A 118 HYQDD------IRRADQMRA-QGITYVDVGTSGGIFGLE---RGY--CLMIGGEKQAVERLDPVFRTLAPGIGAAPRTPG 185 (358)
T ss_dssp CHHHH------HHHHHHHHT-TTCEEEEEEEECGGGHHH---HCC--EEEEESCHHHHHHTHHHHHHHSCCGGGSCCCTT
T ss_pred ChHHH------HHHHHHHHH-CCCEEEeCCCCCCHHHHh---cCC--eeeecCCHHHHHHHHHHHHHhccccccCccccc
Confidence 53321 111222222 121111233445565554 343 3456788887788888876544
Q ss_pred ---------ceEEecCChHHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHh
Q 012547 269 ---------FTVWDNGDLVTHEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLL 322 (461)
Q Consensus 269 ---------~~v~~s~Di~gve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~ 322 (461)
-.+....+.-.-++.+.+.|.+- .....++.|...++++.
T Consensus 186 ~~~~~~~~~~~~~~~G~~G~g~~~Kl~~n~l~--------------~~~i~~~aE~~~la~~a 234 (358)
T 4e21_A 186 REKREGTAELGYLHCGPSGAGHFVKMVHNGIE--------------YGLMAAYAEGLNILHHA 234 (358)
T ss_dssp GGGCCSSGGGTEEEEESTTHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHTT
T ss_pred ccccccccccceEEECCccHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHhc
Confidence 23444445434556666665521 22234678888888876
No 63
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.60 E-value=9.2e-15 Score=141.13 Aligned_cols=193 Identities=13% Similarity=0.141 Sum_probs=121.8
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchh--hhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhh
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS--VDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~--~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (461)
..|||+|||+|+||+++|..|+++ | ++|++|+|+++. ++....+ ++ +.. ...+.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~-G-----~~V~~~~r~~~~~~~~~~~~~-----~~-----------~~~-~~~~~- 73 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADL-G-----HEVTIGTRDPKATLARAEPDA-----MG-----------APP-FSQWL- 73 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHHTCC-----------------------CC-HHHHG-
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC-C-----CEEEEEeCChhhhhhhhhhhh-----hc-----------chh-hhHHH-
Confidence 458999999999999999999999 8 999999999875 2211000 00 000 00000
Q ss_pred hccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHH-HHHhhccCCCCEEEEEee
Q 012547 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEI-SRYWKERITVPVIISLAK 198 (461)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i-~~~l~~~~~~~iIIs~tk 198 (461)
.+ .+....+++++++++||+||+|||++...+++.++ .+.+ + +++||++++
T Consensus 74 -------------~~-----------~~~~~~~~~~e~~~~aDvVilavp~~~~~~~~~~i~~~~l-~---g~ivi~~s~ 125 (245)
T 3dtt_A 74 -------------PE-----------HPHVHLAAFADVAAGAELVVNATEGASSIAALTAAGAENL-A---GKILVDIAN 125 (245)
T ss_dssp -------------GG-----------STTCEEEEHHHHHHHCSEEEECSCGGGHHHHHHHHCHHHH-T---TSEEEECCC
T ss_pred -------------hh-----------cCceeccCHHHHHhcCCEEEEccCcHHHHHHHHHhhhhhc-C---CCEEEECCC
Confidence 00 01123467788889999999999999999999999 7777 4 689999998
Q ss_pred cCcccc-----ccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccC------ceEEEE-eCChhHHHHHHHHhcC
Q 012547 199 GVEAEL-----EAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKE------YANARI-CGAEKWRKPLAKFLRR 266 (461)
Q Consensus 199 Gi~~~~-----~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~------~~~~~~-~~~~~~~~~l~~ll~~ 266 (461)
|+.... ....+...+++.+++.++. .+ ++...|+....+..+. +..+++ +.+++..+.++++|+.
T Consensus 126 ~~~~~~G~~~t~~~~~~~~~~~~l~~~l~~--~~-vv~~~~~~~a~v~~~~~~a~~g~~~~~v~g~d~~~~~~v~~ll~~ 202 (245)
T 3dtt_A 126 PLDFSHGMPPTLNPVNTDSLGEQIQRTFPE--AK-VVKTLNTMNASLMVDPGRAAGGDHSVFVSGNDAAAKAEVATLLKS 202 (245)
T ss_dssp CEECTTCSSCEESSCSSCCHHHHHHHHSTT--SE-EEECSTTSCHHHHHCGGGTGGGCCCEEEECSCHHHHHHHHHHHHH
T ss_pred CCCCcCCccccccCCCCccHHHHHHHHCCC--Ce-EEEeecccCHHHhcCccccCCCCeeEEEECCCHHHHHHHHHHHHH
Confidence 763210 0001456788889888752 23 3344555443333221 222344 4457888999999999
Q ss_pred CCce-EEecCChHHHHHHHHHHHH
Q 012547 267 PHFT-VWDNGDLVTHEVMGGLKNV 289 (461)
Q Consensus 267 ~g~~-v~~s~Di~gve~~galKNv 289 (461)
.|++ ++...++-.....+.+-|.
T Consensus 203 ~g~~~~~~~G~~g~a~~~k~~~~~ 226 (245)
T 3dtt_A 203 LGHQDVIDLGDITTARGAEMLLPV 226 (245)
T ss_dssp TTCCCEEEEESGGGHHHHHTTHHH
T ss_pred cCCCceeccCcHHHHHHhhhhHHH
Confidence 9985 4545554333334433333
No 64
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.58 E-value=1e-13 Score=138.14 Aligned_cols=255 Identities=14% Similarity=0.092 Sum_probs=156.1
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
.+|||+|||+|.||.++|..|+++ | ++|++|+|+++.++.+.+ .
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~-G-----~~V~~~dr~~~~~~~~~~--------~---------------------- 51 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQ-G-----KRVAIWNRSPGKAAALVA--------A---------------------- 51 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSHHHHHHHHH--------H----------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHHH--------C----------------------
Confidence 458999999999999999999999 8 999999999876553110 0
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch-hHHHHHH--HHHHHhhccCCCCEEEEEee
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVFE--EISRYWKERITVPVIISLAK 198 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~-~~~~vl~--~i~~~l~~~~~~~iIIs~tk 198 (461)
++..+++++++++++|+||+|||.. .+++++. .+.+. .+ ++++|.++.
T Consensus 52 -------------------------g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~~l~~~-~~---g~ivid~st 102 (306)
T 3l6d_A 52 -------------------------GAHLCESVKAALSASPATIFVLLDNHATHEVLGMPGVARA-LA---HRTIVDYTT 102 (306)
T ss_dssp -------------------------TCEECSSHHHHHHHSSEEEECCSSHHHHHHHHTSTTHHHH-TT---TCEEEECCC
T ss_pred -------------------------CCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhcccchhhc-cC---CCEEEECCC
Confidence 2345678889899999999999976 5888886 66554 44 678887764
Q ss_pred cCccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEeCChhHHHHHHHHhcCCCceEEec--CC
Q 012547 199 GVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDN--GD 276 (461)
Q Consensus 199 Gi~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~v~~s--~D 276 (461)
+.+.. ...+.+.+.+ .|.......+..+|..+ ..+.. .++++++++..+.++.+|+..+-+++.. .+
T Consensus 103 -~~~~~-----~~~l~~~~~~-~g~~~vdapv~g~~~~~---~~~~~-~i~~gg~~~~~~~~~~ll~~lg~~~~~~~~g~ 171 (306)
T 3l6d_A 103 -NAQDE-----GLALQGLVNQ-AGGHYVKGMIVAYPRNV---GHRES-HSIHTGDREAFEQHRALLEGLAGHTVFLPWDE 171 (306)
T ss_dssp -CCTTH-----HHHHHHHHHH-TTCEEEEEEEESCGGGT---TCTTC-EEEEEECHHHHHHHHHHHHTTCSEEEECCHHH
T ss_pred -CCHHH-----HHHHHHHHHH-cCCeEEecccccCcccc---cCCce-EEEEcCCHHHHHHHHHHHHHhcCCEEEecCCC
Confidence 34331 1222232322 22111111222223221 22222 3456778888899999999885466555 32
Q ss_pred hHHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhhccC---hh--hhhhhhccccchhHHHH
Q 012547 277 LVTHEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGP---LL--ADTYVTLLKGRNAWYGQ 351 (461)
Q Consensus 277 i~gve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~g~---gl--gDl~~T~~~sRN~~~G~ 351 (461)
-.| -+.++|+++ +....++.|+..+++++|.+++++... +. ++... .++ ++.
T Consensus 172 ~~g--~g~~~k~~~---------------~~~~~~~~Ea~~la~~~Gld~~~~~~~~~~~~~~~~s~~----~~~--~~~ 228 (306)
T 3l6d_A 172 ALA--FATVLHAHA---------------FAAMVTFFEAVGAGDRFGLPVSKTARLLLETSRFFVADA----LEE--AVR 228 (306)
T ss_dssp HHH--HHHHHHHHH---------------HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHH----HHH--HHH
T ss_pred Ccc--HHHHHHHHH---------------HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhhhcccHH----HHH--HHH
Confidence 112 222444221 112357899999999999999887642 11 12111 111 122
Q ss_pred HHhcCCChhhHhhhhcCCC-cc-chHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccCCcHHHHHHHHHh
Q 012547 352 ELAKGRLTLDLGDSIKGKG-MI-QGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILI 418 (461)
Q Consensus 352 ~l~~g~~~~~~~~~~~~~~-~v-EG~~~~~~v~~l~~~~~l~~~~~~~~~~~~~v~~~Pi~~~ly~il~ 418 (461)
.+.++. +.... ++ -.....+.+.+.+++.|+ + +|+.+.+.+++.
T Consensus 229 ~~~~~~--------~~~~~~~~~~~~KDl~~~~~~a~~~g~--------------~-~p~~~~~~~~~~ 274 (306)
T 3l6d_A 229 RLETQD--------FKGDQARLDVHADAFAHIAQSLHAQGV--------------W-TPVFDAVCQVVQ 274 (306)
T ss_dssp HHHHTC--------CCTTSSBHHHHHHHHHHHHHHHHHTTC--------------C-CHHHHHHHHHHH
T ss_pred HHhcCC--------CCCCcccHHHHHHHHHHHHHHHHHcCC--------------C-chHHHHHHHHHH
Confidence 222211 11111 22 234566789999999995 6 899999988774
No 65
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.58 E-value=3.5e-14 Score=138.91 Aligned_cols=175 Identities=16% Similarity=0.105 Sum_probs=117.5
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCe--eEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~--~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
+|||+|||+|+||+++|..|++. | + +|++|+|+++.++.+. +. +.
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~-g-----~~~~V~~~d~~~~~~~~~~---------~~---------------g~--- 47 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRS-G-----FKGKIYGYDINPESISKAV---------DL---------------GI--- 47 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHT-T-----CCSEEEEECSCHHHHHHHH---------HT---------------TS---
T ss_pred CcEEEEEecCHHHHHHHHHHHhc-C-----CCcEEEEEeCCHHHHHHHH---------HC---------------CC---
Confidence 36999999999999999999998 8 6 8999999987554311 00 00
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhc-CCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeec
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW-DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~-~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkG 199 (461)
....++|++++++ ++|+||+|||++.+.++++++.+++++ +++|+.+++
T Consensus 48 --------------------------~~~~~~~~~~~~~~~aDvVilavp~~~~~~v~~~l~~~l~~---~~iv~~~~~- 97 (281)
T 2g5c_A 48 --------------------------IDEGTTSIAKVEDFSPDFVMLSSPVRTFREIAKKLSYILSE---DATVTDQGS- 97 (281)
T ss_dssp --------------------------CSEEESCGGGGGGTCCSEEEECSCHHHHHHHHHHHHHHSCT---TCEEEECCS-
T ss_pred --------------------------cccccCCHHHHhcCCCCEEEEcCCHHHHHHHHHHHHhhCCC---CcEEEECCC-
Confidence 1123567777888 999999999999999999999998876 666666553
Q ss_pred CccccccccccCCHHHHHHhHhCC---CCCcEE--EEeCcchhH-hhhccCceEEEE--eCChhHHHHHHHHhcCCCceE
Q 012547 200 VEAELEAVPRIITPTQMINRATGV---PIENIL--YLGGPNIAS-EIYNKEYANARI--CGAEKWRKPLAKFLRRPHFTV 271 (461)
Q Consensus 200 i~~~~~~~~~~~~~se~i~~~lg~---~~~~v~--vlsGPn~a~-ev~~g~~~~~~~--~~~~~~~~~l~~ll~~~g~~v 271 (461)
.... ..+.+.+.++. +.+++. ..+||+++. ++..+.++.++. +.+++..+.++++|+..|+++
T Consensus 98 ~~~~---------~~~~l~~~l~~~~v~~~p~~~~~~~gp~~a~~~l~~g~~~~~~~~~~~~~~~~~~v~~l~~~~g~~~ 168 (281)
T 2g5c_A 98 VKGK---------LVYDLENILGKRFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGVV 168 (281)
T ss_dssp CCTH---------HHHHHHHHHGGGEECEEEECCCSCCSGGGCCSSTTTTCEEEECCCSSSCHHHHHHHHHHHHHTTCEE
T ss_pred CcHH---------HHHHHHHhccccceeeccccCCccCChhhhhhHHhCCCCEEEecCCCCCHHHHHHHHHHHHHcCCEE
Confidence 3222 11234444321 111211 234677764 345665444333 346778899999999999999
Q ss_pred EecCChHHHHH---HHHHHHH
Q 012547 272 WDNGDLVTHEV---MGGLKNV 289 (461)
Q Consensus 272 ~~s~Di~gve~---~galKNv 289 (461)
+..++...-+| ++.+.|.
T Consensus 169 ~~~~~~~~d~~~~~~~~~~~~ 189 (281)
T 2g5c_A 169 EYMSPELHDYVFGVVSHLPHA 189 (281)
T ss_dssp EECCHHHHHHHHHHHTHHHHH
T ss_pred EEcCHHHHHHHHHHHHHHHHH
Confidence 88887665434 4444444
No 66
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.53 E-value=2e-13 Score=137.34 Aligned_cols=212 Identities=14% Similarity=0.126 Sum_probs=135.7
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
.++||+|||+|.||++||..|+++ | ++|++|+++++.++.+.+. +.. +..++... +.+
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~~-G-----~~V~l~d~~~~~~~~~~~~-----i~~----------~l~~l~~~-G~~ 62 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFASG-G-----FRVKLYDIEPRQITGALEN-----IRK----------EMKSLQQS-GSL 62 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSCHHHHHHHHHH-----HHH----------HHHHHHHT-TCC
T ss_pred CCceEEEEeeCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHHHH-----HHH----------HHHHHHHc-Ccc
Confidence 457999999999999999999999 8 9999999999887754321 111 00000000 000
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch--hHHHHHHHHHHHhhccCCCCEEEEEeec
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST--ETKEVFEEISRYWKERITVPVIISLAKG 199 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~--~~~~vl~~i~~~l~~~~~~~iIIs~tkG 199 (461)
++ .+.+.++ ..++.+++|+++++++||+||+|||.. ..+.+++++.+++++ +++|+|.+.|
T Consensus 63 ~g-~~~~~~~-------------~~~i~~~~~~~eav~~aDlVieavpe~~~~k~~v~~~l~~~~~~---~~Ii~s~tS~ 125 (319)
T 2dpo_A 63 KG-SLSAEEQ-------------LSLISSCTNLAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDD---RVVLSSSSSC 125 (319)
T ss_dssp CS-SSCHHHH-------------HHTEEEECCHHHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCS---SSEEEECCSS
T ss_pred cc-ccchHHH-------------hhceEEeCCHHHHHhcCCEEEEeccCCHHHHHHHHHHHHhhCCC---CeEEEEeCCC
Confidence 00 0000000 015788999999999999999999974 577899999998887 7888888877
Q ss_pred CccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEe--CChhHHHHHHHHhcCCCceEEec-CC
Q 012547 200 VEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDN-GD 276 (461)
Q Consensus 200 i~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~--~~~~~~~~l~~ll~~~g~~v~~s-~D 276 (461)
+... .+.+.+..+ .++ +...|..+..+ .....++.+ .+++..+.+.++|...|..+... .|
T Consensus 126 i~~~------------~la~~~~~~-~r~-ig~Hp~~P~~~--~~lveiv~g~~t~~e~~~~~~~l~~~lGk~~v~v~~~ 189 (319)
T 2dpo_A 126 LLPS------------KLFTGLAHV-KQC-IVAHPVNPPYY--IPLVELVPHPETSPATVDRTHALMRKIGQSPVRVLKE 189 (319)
T ss_dssp CCHH------------HHHTTCTTG-GGE-EEEEECSSTTT--CCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEECSSC
T ss_pred hHHH------------HHHHhcCCC-CCe-EEeecCCchhh--cceEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEECCC
Confidence 6543 255555432 232 22334433322 112222333 46788899999999999877665 56
Q ss_pred hHHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhhc
Q 012547 277 LVTHEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLA 330 (461)
Q Consensus 277 i~gve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~~ 330 (461)
.-|- ++ | -++...++|...+++..+++++.+.
T Consensus 190 ~~Gf---------------i~----N---rll~a~~~EA~~l~~~g~~~~~~id 221 (319)
T 2dpo_A 190 IDGF---------------VL----N---RLQYAIISEAWRLVEEGIVSPSDLD 221 (319)
T ss_dssp CTTT---------------TH----H---HHHHHHHHHHHHHHHTTSSCHHHHH
T ss_pred cCCc---------------hH----H---HHHHHHHHHHHHHHHhCCCCHHHHH
Confidence 5442 01 1 2233468899999988888887653
No 67
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.52 E-value=1.9e-13 Score=132.66 Aligned_cols=157 Identities=15% Similarity=0.096 Sum_probs=109.7
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCee-EEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~-V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
.|||+|||+|.||+++|..|++. | ++ |.+|+|+++.++.+.+ . +
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~-g-----~~~v~~~~~~~~~~~~~~~---------~------------~-------- 54 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRK-G-----FRIVQVYSRTEESARELAQ---------K------------V-------- 54 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHH-T-----CCEEEEECSSHHHHHHHHH---------H------------T--------
T ss_pred CCeEEEEcCCHHHHHHHHHHHHC-C-----CeEEEEEeCCHHHHHHHHH---------H------------c--------
Confidence 47999999999999999999999 8 77 9999999876543110 0 0
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecCc
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~ 201 (461)
++..+++++++++++|+||+|||++.++++++++.+++++ ++++|++++|++
T Consensus 55 -------------------------g~~~~~~~~~~~~~~Dvvi~av~~~~~~~v~~~l~~~~~~---~~ivv~~s~~~~ 106 (266)
T 3d1l_A 55 -------------------------EAEYTTDLAEVNPYAKLYIVSLKDSAFAELLQGIVEGKRE---EALMVHTAGSIP 106 (266)
T ss_dssp -------------------------TCEEESCGGGSCSCCSEEEECCCHHHHHHHHHHHHTTCCT---TCEEEECCTTSC
T ss_pred -------------------------CCceeCCHHHHhcCCCEEEEecCHHHHHHHHHHHHhhcCC---CcEEEECCCCCc
Confidence 2345677778788999999999999999999999888766 789999999987
Q ss_pred cccccccccCCHHHHHHhHhCCCC--CcEEEEeCcchhHhhhccCceEEEEeCChhHHHHHHHHhcCCCceEEecCCh
Q 012547 202 AELEAVPRIITPTQMINRATGVPI--ENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDL 277 (461)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~--~~v~vlsGPn~a~ev~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~v~~s~Di 277 (461)
.+. +.+.++.+. +....++||.. . ..+....++.+.+++..+.++++|+..|++++..++.
T Consensus 107 ~~~------------l~~~~~~~~~~~~~~~~~g~~~--~-~~~~~~~~v~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 169 (266)
T 3d1l_A 107 MNV------------WEGHVPHYGVFYPMQTFSKQRE--V-DFKEIPFFIEASSTEDAAFLKAIASTLSNRVYDADSE 169 (266)
T ss_dssp GGG------------STTTCSSEEEEEECCCC---CC--C-CCTTCCEEEEESSHHHHHHHHHHHHTTCSCEEECCHH
T ss_pred hHH------------HHHHHHhccCcCCceecCCCch--h-hcCCCeEEEecCCHHHHHHHHHHHHhcCCcEEEeCHH
Confidence 641 333332100 01111223222 1 1222233333567788899999999999888877654
No 68
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.52 E-value=4.2e-13 Score=129.66 Aligned_cols=152 Identities=15% Similarity=0.139 Sum_probs=109.7
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
++|||+|||+|.||.+++..|++. | ++|.+|+|++++++.+.++ +
T Consensus 2 ~~m~i~iiG~G~mG~~~a~~l~~~-g-----~~v~~~~~~~~~~~~~~~~---------------------~-------- 46 (259)
T 2ahr_A 2 NAMKIGIIGVGKMASAIIKGLKQT-P-----HELIISGSSLERSKEIAEQ---------------------L-------- 46 (259)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTS-S-----CEEEEECSSHHHHHHHHHH---------------------H--------
T ss_pred CccEEEEECCCHHHHHHHHHHHhC-C-----CeEEEECCCHHHHHHHHHH---------------------c--------
Confidence 458999999999999999999988 7 8999999998765431100 0
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecCc
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~ 201 (461)
++..++|++++++++|+||+|+|++.+++++.++. + ++++|++++|+.
T Consensus 47 -------------------------g~~~~~~~~~~~~~~D~Vi~~v~~~~~~~v~~~l~----~---~~~vv~~~~~~~ 94 (259)
T 2ahr_A 47 -------------------------ALPYAMSHQDLIDQVDLVILGIKPQLFETVLKPLH----F---KQPIISMAAGIS 94 (259)
T ss_dssp -------------------------TCCBCSSHHHHHHTCSEEEECSCGGGHHHHHTTSC----C---CSCEEECCTTCC
T ss_pred -------------------------CCEeeCCHHHHHhcCCEEEEEeCcHhHHHHHHHhc----c---CCEEEEeCCCCC
Confidence 12234677788889999999999999998887753 3 578888888887
Q ss_pred cccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEeC--ChhHHHHHHHHhcCCCceEEecC
Q 012547 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICG--AEKWRKPLAKFLRRPHFTVWDNG 275 (461)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~~--~~~~~~~l~~ll~~~g~~v~~s~ 275 (461)
.+ .+++.++.. .++ +..+|+++..+..|. ..+..+. +++..+.++++|+..|..++..+
T Consensus 95 ~~------------~l~~~~~~~-~~~-v~~~p~~~~~~~~g~-~~i~~~~~~~~~~~~~~~~ll~~~G~~~~~~~ 155 (259)
T 2ahr_A 95 LQ------------RLATFVGQD-LPL-LRIMPNMNAQILQSS-TALTGNALVSQELQARVRDLTDSFGSTFDISE 155 (259)
T ss_dssp HH------------HHHHHHCTT-SCE-EEEECCGGGGGTCEE-EEEEECTTCCHHHHHHHHHHHHTTEEEEECCG
T ss_pred HH------------HHHHhcCCC-CCE-EEEcCCchHHHcCce-EEEEcCCCCCHHHHHHHHHHHHhCCCEEEecH
Confidence 54 356666532 233 347899888777763 2223443 67778999999999985444443
No 69
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.46 E-value=3.4e-13 Score=132.56 Aligned_cols=153 Identities=16% Similarity=0.143 Sum_probs=109.2
Q ss_pred CceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 43 ~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
+|||+|||+ |.||+++|..|++. | ++|++|+|+++.++.+.+ +
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~-g-----~~V~~~~r~~~~~~~~~~----------------------~-------- 54 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDS-A-----HHLAAIEIAPEGRDRLQG----------------------M-------- 54 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHS-S-----SEEEEECCSHHHHHHHHH----------------------T--------
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC-C-----CEEEEEECCHHHHHHHHh----------------------c--------
Confidence 479999999 99999999999998 8 899999999875543110 0
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecCc
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~ 201 (461)
++..+ ++.++++++|+||+|||++.++++++++.+++++ +++||++++|..
T Consensus 55 -------------------------g~~~~-~~~~~~~~aDvVi~av~~~~~~~v~~~l~~~l~~---~~ivv~~s~~~~ 105 (286)
T 3c24_A 55 -------------------------GIPLT-DGDGWIDEADVVVLALPDNIIEKVAEDIVPRVRP---GTIVLILDAAAP 105 (286)
T ss_dssp -------------------------TCCCC-CSSGGGGTCSEEEECSCHHHHHHHHHHHGGGSCT---TCEEEESCSHHH
T ss_pred -------------------------CCCcC-CHHHHhcCCCEEEEcCCchHHHHHHHHHHHhCCC---CCEEEECCCCch
Confidence 01111 4456788999999999999999999999998876 689999888874
Q ss_pred cccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHh--------hhccCce-------EEE-EeCChhHHHHHHHHhc
Q 012547 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASE--------IYNKEYA-------NAR-ICGAEKWRKPLAKFLR 265 (461)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~e--------v~~g~~~-------~~~-~~~~~~~~~~l~~ll~ 265 (461)
.. .+.+..+ ..+ .+...|+++.+ +..|.++ .+. .+.+++..+.++++|+
T Consensus 106 ~~------------~l~~~~~--~~~-~v~~~P~~~~~~~~~~~~~~~~g~l~~~~~~~~i~~~~~~~~~~~~~v~~l~~ 170 (286)
T 3c24_A 106 YA------------GVMPERA--DIT-YFIGHPCHPPLFNDETDPAARTDYHGGIAKQAIVCALMQGPEEHYAIGADICE 170 (286)
T ss_dssp HH------------TCSCCCT--TSE-EEEEEECCSCSSCCCCSHHHHTCSSSSSSCEEEEEEEEESCTHHHHHHHHHHH
T ss_pred hH------------HHHhhhC--CCe-EEecCCCCccccccccchhhccCcccccccceeeeeccCCCHHHHHHHHHHHH
Confidence 33 1222111 122 34477777544 5666422 222 3456788899999999
Q ss_pred CCCc---eEEecC
Q 012547 266 RPHF---TVWDNG 275 (461)
Q Consensus 266 ~~g~---~v~~s~ 275 (461)
..|. +++..+
T Consensus 171 ~~G~~~~~~~~v~ 183 (286)
T 3c24_A 171 TMWSPVTRTHRVT 183 (286)
T ss_dssp HHTCSEEEEEECC
T ss_pred HhcCCcceEEEeC
Confidence 9998 666554
No 70
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.45 E-value=9.8e-13 Score=130.40 Aligned_cols=212 Identities=11% Similarity=0.115 Sum_probs=130.5
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhh---hHHHHHhhhhhhHHhhhhcccccchhh
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAE---HLFEVINSREDVLRRLIRRCAYLKYVE 118 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~---~l~~~i~~~~~~~~~~~~n~~~l~~~~ 118 (461)
.++||+|||+|.||++||..|+++ | ++|++|+|+++.++..... .+....+.+ .+....
T Consensus 14 ~~~~I~VIG~G~mG~~iA~~la~~-G-----~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g------------~~~~~~ 75 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGAGIAQVAAAT-G-----HTVVLVDQTEDILAKSKKGIEESLRKVAKKK------------FAENPK 75 (302)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHHHHHHHHHHHHHTT------------SSSCHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHhC-C-----CeEEEEECCHHHHHHHHHHHHHHHHHHHHcC------------CCCccc
Confidence 357899999999999999999999 8 9999999999877653211 000000000 000000
Q ss_pred hhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchh--HHHHHHHHHHHhhccCCCCEEEEE
Q 012547 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE--TKEVFEEISRYWKERITVPVIISL 196 (461)
Q Consensus 119 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~--~~~vl~~i~~~l~~~~~~~iIIs~ 196 (461)
+. .+..++. ...+.+++|+++++++||+||+|||.+. .+++++++.+++++ ++++++.
T Consensus 76 ---~~-~~~~~~~-------------~~~i~~~~~~~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~---~~iv~s~ 135 (302)
T 1f0y_A 76 ---AG-DEFVEKT-------------LSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAE---HTIFASN 135 (302)
T ss_dssp ---HH-HHHHHHH-------------HHTEEEESCHHHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCT---TCEEEEC
T ss_pred ---cc-hhhHHHH-------------HhceEEecCHHHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCC---CeEEEEC
Confidence 00 0000000 0147788999888999999999999864 67889999988876 6888888
Q ss_pred eecCccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEe--CChhHHHHHHHHhcCCCceEEec
Q 012547 197 AKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDN 274 (461)
Q Consensus 197 tkGi~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~--~~~~~~~~l~~ll~~~g~~v~~s 274 (461)
++|++.. + +.+.+..+ .++ +...|..+..+ +....++.+ .+++..+.+.+++...|..+...
T Consensus 136 ts~i~~~-----------~-l~~~~~~~-~~~-~g~h~~~P~~~--~~~~~i~~g~~~~~e~~~~~~~l~~~~G~~~v~~ 199 (302)
T 1f0y_A 136 TSSLQIT-----------S-IANATTRQ-DRF-AGLHFFNPVPV--MKLVEVIKTPMTSQKTFESLVDFSKALGKHPVSC 199 (302)
T ss_dssp CSSSCHH-----------H-HHTTSSCG-GGE-EEEEECSSTTT--CCEEEEECCTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCHH-----------H-HHHhcCCc-ccE-EEEecCCCccc--CceEEEeCCCCCCHHHHHHHHHHHHHcCCceEEe
Confidence 8887654 2 44444422 222 22233322222 222222223 25778899999998888766655
Q ss_pred CChHHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhh
Q 012547 275 GDLVTHEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKL 329 (461)
Q Consensus 275 ~Di~gve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~ 329 (461)
.|.-|. +. | .++...++|..++++..|.+++++
T Consensus 200 ~~~~g~----i~---------------n---r~l~~~~~Ea~~l~~~g~~~~~~i 232 (302)
T 1f0y_A 200 KDTPGF----IV---------------N---RLLVPYLMEAIRLYERGDASKEDI 232 (302)
T ss_dssp CSCTTT----TH---------------H---HHHHHHHHHHHHHHHTTSSCHHHH
T ss_pred cCcccc----cH---------------H---HHHHHHHHHHHHHHHcCCCCHHHH
Confidence 553321 11 1 122245789889998888877664
No 71
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.43 E-value=3.3e-12 Score=119.47 Aligned_cols=186 Identities=14% Similarity=0.220 Sum_probs=123.1
Q ss_pred ceEEEEC-ccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 44 LRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 44 mkI~IIG-aGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
|||+||| +|.||++++..|++. | ++|++|+|++++++.+.++ + . .+++.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~-g-----~~V~~~~r~~~~~~~~~~~-----~---~----------~~~~~------ 50 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATL-G-----HEIVVGSRREEKAEAKAAE-----Y---R----------RIAGD------ 50 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT-T-----CEEEEEESSHHHHHHHHHH-----H---H----------HHHSS------
T ss_pred CeEEEEcCCCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHHHH-----h---c----------ccccc------
Confidence 6999999 999999999999998 8 8999999998765542211 0 0 01110
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecCcc
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~~ 202 (461)
..+. .++++++++++|+||+|+|++.++++++++.+.++ +++++++++|+..
T Consensus 51 -----------------------~~~~-~~~~~~~~~~~D~Vi~~~~~~~~~~~~~~l~~~~~----~~~vi~~~~g~~~ 102 (212)
T 1jay_A 51 -----------------------ASIT-GMKNEDAAEACDIAVLTIPWEHAIDTARDLKNILR----EKIVVSPLVPVSR 102 (212)
T ss_dssp -----------------------CCEE-EEEHHHHHHHCSEEEECSCHHHHHHHHHHTHHHHT----TSEEEECCCCEEC
T ss_pred -----------------------CCCC-hhhHHHHHhcCCEEEEeCChhhHHHHHHHHHHHcC----CCEEEEcCCCcCc
Confidence 0233 35677788899999999999999999999988774 5899999999985
Q ss_pred ccccc--cccCCHHHHHHhHhCCCCCcEEEEeCcchh-Hhhhc--cCceEE-EEeC-ChhHHHHHHHHhcCC-CceEEec
Q 012547 203 ELEAV--PRIITPTQMINRATGVPIENILYLGGPNIA-SEIYN--KEYANA-RICG-AEKWRKPLAKFLRRP-HFTVWDN 274 (461)
Q Consensus 203 ~~~~~--~~~~~~se~i~~~lg~~~~~v~vlsGPn~a-~ev~~--g~~~~~-~~~~-~~~~~~~l~~ll~~~-g~~v~~s 274 (461)
+.... .......+.+++.++. .++ +...|+.+ ..... ...... ..++ +++..+.++++|+.. |+.+...
T Consensus 103 ~~~~~~~~~g~~~~~~l~~~~~~--~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~l~~~~~G~~~~~~ 179 (212)
T 1jay_A 103 GAKGFTYSSERSAAEIVAEVLES--EKV-VSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDA 179 (212)
T ss_dssp CTTCCEECCSSCHHHHHHHHHTC--SCE-EECCTTCCHHHHHCTTCCCCEEEEEEESCHHHHHHHHHHHHHSTTEEEEEE
T ss_pred CCceeecCCCCcHHHHHHHhCCC--CeE-EEEccchHHHHhhCcCCCCCccEEEECCcHHHHHHHHHHHHHcCCCCceec
Confidence 31000 0011234567777752 333 34444443 33222 122222 3334 477889999999999 9987776
Q ss_pred CChHHHHHHHHHHHHH
Q 012547 275 GDLVTHEVMGGLKNVY 290 (461)
Q Consensus 275 ~Di~gve~~galKNv~ 290 (461)
.++....|.+.+-|.+
T Consensus 180 ~~~~~a~~~k~~~~~~ 195 (212)
T 1jay_A 180 GPLSNSRLVESLTPLI 195 (212)
T ss_dssp ESGGGHHHHHTHHHHH
T ss_pred cchhHHHHhcchHHHH
Confidence 7765566666555543
No 72
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.42 E-value=4.2e-12 Score=124.94 Aligned_cols=210 Identities=14% Similarity=0.147 Sum_probs=130.6
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
++||+|||+|.||+++|..|+.+ | ++|++|+++++.++...+. +... +..+.+... .+.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~-G-----~~V~l~d~~~~~~~~~~~~-----i~~~---------~~~~~~~g~-~~~ 62 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFH-G-----FAVTAYDINTDALDAAKKR-----FEGL---------AAVYEKEVA-GAA 62 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSHHHHHHHHHH-----HHHH---------HHHHHHHST-TCT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CeEEEEeCCHHHHHHHHHH-----HHHH---------HHHHHHhcc-cCC
Confidence 46999999999999999999999 8 9999999999877653321 1110 001111000 000
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch--hHHHHHHHHHHHhhccCCCCEEEEEeecC
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST--ETKEVFEEISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~--~~~~vl~~i~~~l~~~~~~~iIIs~tkGi 200 (461)
.... ++. ...+..++|+++++++||+||+|||++ ..+++++++.+++++ ++++++.+.++
T Consensus 63 ~~~~--~~~-------------~~~i~~~~~~~~~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~---~~il~s~tS~~ 124 (283)
T 4e12_A 63 DGAA--QKA-------------LGGIRYSDDLAQAVKDADLVIEAVPESLDLKRDIYTKLGELAPA---KTIFATNSSTL 124 (283)
T ss_dssp TTHH--HHH-------------HHHCEEESCHHHHTTTCSEEEECCCSCHHHHHHHHHHHHHHSCT---TCEEEECCSSS
T ss_pred HHHH--HHH-------------HcCeEEeCCHHHHhccCCEEEEeccCcHHHHHHHHHHHHhhCCC---CcEEEECCCCC
Confidence 0000 000 013677899999899999999999987 889999999999887 78888888776
Q ss_pred ccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEe--CChhHHHHHHHHhcCCCceEEec-CCh
Q 012547 201 EAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDN-GDL 277 (461)
Q Consensus 201 ~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~--~~~~~~~~l~~ll~~~g~~v~~s-~Di 277 (461)
... + +.+.++.+ .++. -..|..+. ..+....++.+ .+++..+.+.+++...|..+... .|.
T Consensus 125 ~~~-----------~-la~~~~~~-~~~i-g~h~~~p~--~~~~lvevv~~~~t~~~~~~~~~~l~~~~g~~~v~v~~~~ 188 (283)
T 4e12_A 125 LPS-----------D-LVGYTGRG-DKFL-ALHFANHV--WVNNTAEVMGTTKTDPEVYQQVVEFASAIGMVPIELKKEK 188 (283)
T ss_dssp CHH-----------H-HHHHHSCG-GGEE-EEEECSST--TTSCEEEEEECTTSCHHHHHHHHHHHHHTTCEEEECSSCC
T ss_pred CHH-----------H-HHhhcCCC-cceE-EEccCCCc--ccCceEEEEeCCCCCHHHHHHHHHHHHHcCCEEEEEecCC
Confidence 543 2 45555432 2321 11222211 12222222333 25678899999999888776654 554
Q ss_pred HHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhh
Q 012547 278 VTHEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKL 329 (461)
Q Consensus 278 ~gve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~ 329 (461)
-|- +-| .++...++|...+.+..+++++++
T Consensus 189 ~g~-----i~n-----------------r~~~~~~~ea~~l~~~g~~~~~~i 218 (283)
T 4e12_A 189 AGY-----VLN-----------------SLLVPLLDAAAELLVDGIADPETI 218 (283)
T ss_dssp TTT-----THH-----------------HHHHHHHHHHHHHHHTTSCCHHHH
T ss_pred CCE-----Eeh-----------------HHHHHHHHHHHHHHHhCCCCHHHH
Confidence 332 001 122235677777777777777654
No 73
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.42 E-value=1e-12 Score=124.45 Aligned_cols=166 Identities=11% Similarity=0.128 Sum_probs=114.3
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
.+|||+|||+|.||++++..|++. | ++|.+|+|++++++.+. .
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~-g-----~~V~~~~r~~~~~~~~~---------~---------------------- 69 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGS-G-----FKVVVGSRNPKRTARLF---------P---------------------- 69 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESSHHHHHHHS---------B----------------------
T ss_pred CCCEEEEEccCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHH---------H----------------------
Confidence 347999999999999999999998 8 89999999976543210 0
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecCc
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~ 201 (461)
.++..+ +++++++++|+||+|+|++.++++++ +.+.+ + ++++|++++|+.
T Consensus 70 ------------------------~g~~~~-~~~~~~~~~DvVi~av~~~~~~~v~~-l~~~~-~---~~~vv~~s~g~~ 119 (215)
T 2vns_A 70 ------------------------SAAQVT-FQEEAVSSPEVIFVAVFREHYSSLCS-LSDQL-A---GKILVDVSNPTE 119 (215)
T ss_dssp ------------------------TTSEEE-EHHHHTTSCSEEEECSCGGGSGGGGG-GHHHH-T---TCEEEECCCCCH
T ss_pred ------------------------cCCcee-cHHHHHhCCCEEEECCChHHHHHHHH-HHHhc-C---CCEEEEeCCCcc
Confidence 012333 67778899999999999988888776 76666 4 689999999987
Q ss_pred cccccccccCCHHHHHHhHhCCCCCcEEE----EeCcchhHhhhccCceEEEEeCChhHHHHHHHHhcCCCceEEecCCh
Q 012547 202 AELEAVPRIITPTQMINRATGVPIENILY----LGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDL 277 (461)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~~~v~v----lsGPn~a~ev~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~v~~s~Di 277 (461)
.... .......+++.+.++. .++.. ++++.++..+..+.......+.+++..+.++++|+..|++++...++
T Consensus 120 ~~~l--~~~~~~~~~l~~~l~~--~~vv~~~n~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~~ll~~~G~~~~~~g~~ 195 (215)
T 2vns_A 120 QEHL--QHRESNAEYLASLFPT--CTVVKAFNVISAWTLQAGPRDGNRQVPICGDQPEAKRAVSEMALAMGFMPVDMGSL 195 (215)
T ss_dssp HHHH--HCSSCHHHHHHHHCTT--SEEEEECTTBCHHHHHTCSCSSCCEEEEEESCHHHHHHHHHHHHHTTCEEEECCSG
T ss_pred cccc--cccccHHHHHHHHCCC--CeEEeccccccHhHhcccccCCceeEEEecCCHHHHHHHHHHHHHcCCceEeecch
Confidence 5410 0113456777777752 23221 12222222222333333344667888899999999999999988875
Q ss_pred H
Q 012547 278 V 278 (461)
Q Consensus 278 ~ 278 (461)
.
T Consensus 196 ~ 196 (215)
T 2vns_A 196 A 196 (215)
T ss_dssp G
T ss_pred h
Confidence 3
No 74
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.41 E-value=4.3e-12 Score=127.21 Aligned_cols=161 Identities=16% Similarity=0.126 Sum_probs=108.5
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCe--eEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~--~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
.|||+|||+|.||+++|..|++. | + +|++|+|+++.++.+.+ . +.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~-G-----~~~~V~~~dr~~~~~~~a~~--------~----------------G~--- 79 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRS-G-----FKGKIYGYDINPESISKAVD--------L----------------GI--- 79 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHT-T-----CCSEEEEECSCHHHHHHHHH--------T----------------TS---
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-C-----CCCEEEEEECCHHHHHHHHH--------C----------------CC---
Confidence 48999999999999999999999 8 6 99999999876543110 0 00
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHH-HhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeec
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQE-AVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~-av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkG 199 (461)
....++|+++ ++++||+||+|||++.+.++++++.+++++ +++|++++ +
T Consensus 80 --------------------------~~~~~~~~~~~~~~~aDvVilavp~~~~~~vl~~l~~~l~~---~~iv~d~~-S 129 (314)
T 3ggo_A 80 --------------------------IDEGTTSIAKVEDFSPDFVMLSSPVRTFREIAKKLSYILSE---DATVTDQG-S 129 (314)
T ss_dssp --------------------------CSEEESCTTGGGGGCCSEEEECSCGGGHHHHHHHHHHHSCT---TCEEEECC-S
T ss_pred --------------------------cchhcCCHHHHhhccCCEEEEeCCHHHHHHHHHHHhhccCC---CcEEEECC-C
Confidence 1134577778 889999999999999999999999999887 67777654 3
Q ss_pred CccccccccccCCHHHHHHhHhCCCCCcEEEEe-----CcchhH-hhhccCceEEEEe--CChhHHHHHHHHhcCCCceE
Q 012547 200 VEAELEAVPRIITPTQMINRATGVPIENILYLG-----GPNIAS-EIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTV 271 (461)
Q Consensus 200 i~~~~~~~~~~~~~se~i~~~lg~~~~~v~vls-----GPn~a~-ev~~g~~~~~~~~--~~~~~~~~l~~ll~~~g~~v 271 (461)
+... +.+.+.+.++........+. ||..+. ++..+.+..++.. .+++..+.++++|+..|.++
T Consensus 130 vk~~---------~~~~~~~~l~~~~v~~hPm~G~e~sG~~~A~~~Lf~g~~~il~~~~~~~~~~~~~v~~l~~~~G~~v 200 (314)
T 3ggo_A 130 VKGK---------LVYDLENILGKRFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGVV 200 (314)
T ss_dssp CCTH---------HHHHHHHHHGGGEECEEECCCCCCCSGGGCCTTTTTTCEEEECCCTTSCHHHHHHHHHHHHHTTCEE
T ss_pred CcHH---------HHHHHHHhcCCCEEecCcccCCcccchhhhhhhhhcCCEEEEEeCCCCCHHHHHHHHHHHHHcCCEE
Confidence 3211 12334444421101111223 444443 2335544433332 35778899999999999887
Q ss_pred EecC
Q 012547 272 WDNG 275 (461)
Q Consensus 272 ~~s~ 275 (461)
+..+
T Consensus 201 ~~~~ 204 (314)
T 3ggo_A 201 EYMS 204 (314)
T ss_dssp EECC
T ss_pred EEcC
Confidence 7554
No 75
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.39 E-value=4.4e-12 Score=124.52 Aligned_cols=164 Identities=16% Similarity=0.107 Sum_probs=109.4
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
+|||+|||+|+||+++|..|+++ |. +++|.+|+|+++.++.+. +. +.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~-g~---~~~V~~~d~~~~~~~~~~---------~~---------------g~----- 52 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRD-HP---HYKIVGYNRSDRSRDIAL---------ER---------------GI----- 52 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-CT---TSEEEEECSSHHHHHHHH---------HT---------------TS-----
T ss_pred cceEEEEeeCHHHHHHHHHHHhC-CC---CcEEEEEcCCHHHHHHHH---------Hc---------------CC-----
Confidence 47999999999999999999987 51 168999999987554311 00 00
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHH-hhccCCCCEEEEEeecCc
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRY-WKERITVPVIISLAKGVE 201 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~-l~~~~~~~iIIs~tkGi~ 201 (461)
....++|++++++++|+||+|||++.++++++++.++ +++ +++|++++++ .
T Consensus 53 ------------------------~~~~~~~~~~~~~~aDvVilavp~~~~~~v~~~l~~~~l~~---~~ivi~~~~~-~ 104 (290)
T 3b1f_A 53 ------------------------VDEATADFKVFAALADVIILAVPIKKTIDFIKILADLDLKE---DVIITDAGST-K 104 (290)
T ss_dssp ------------------------CSEEESCTTTTGGGCSEEEECSCHHHHHHHHHHHHTSCCCT---TCEEECCCSC-H
T ss_pred ------------------------cccccCCHHHhhcCCCEEEEcCCHHHHHHHHHHHHhcCCCC---CCEEEECCCC-c
Confidence 0134566777788999999999999999999999988 876 6777755432 2
Q ss_pred cccccccccCCHHHHHHhHhCCCCCcEE--------EEeCcchhH-hhhccCceEEEE--eCChhHHHHHHHHhcCCCce
Q 012547 202 AELEAVPRIITPTQMINRATGVPIENIL--------YLGGPNIAS-EIYNKEYANARI--CGAEKWRKPLAKFLRRPHFT 270 (461)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~~~v~--------vlsGPn~a~-ev~~g~~~~~~~--~~~~~~~~~l~~ll~~~g~~ 270 (461)
.. ..+.+.+.++....++. ..+||+.+. ++..+.+..... +.+++..+.++++|+..|++
T Consensus 105 ~~---------~~~~l~~~l~~~~~~~v~~~P~~g~~~~g~~~a~~~l~~g~~~~~~~~~~~~~~~~~~v~~l~~~~G~~ 175 (290)
T 3b1f_A 105 YE---------IVRAAEYYLKDKPVQFVGSHPMAGSHKSGAVAANVNLFENAYYIFSPSCLTKPNTIPALQDLLSGLHAR 175 (290)
T ss_dssp HH---------HHHHHHHHHTTSSCEEEEEEEC-----CCTTSCCTTTTTTSEEEEEECTTCCTTHHHHHHHHTGGGCCE
T ss_pred hH---------HHHHHHHhccccCCEEEEeCCcCCCCcchHHHhhHHHhCCCeEEEecCCCCCHHHHHHHHHHHHHcCCE
Confidence 21 11445665542111221 112555443 344555444333 24567889999999999999
Q ss_pred EEecCC
Q 012547 271 VWDNGD 276 (461)
Q Consensus 271 v~~s~D 276 (461)
++..++
T Consensus 176 ~~~~~~ 181 (290)
T 3b1f_A 176 YVEIDA 181 (290)
T ss_dssp EEECCH
T ss_pred EEEcCH
Confidence 876654
No 76
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.39 E-value=1.1e-11 Score=130.26 Aligned_cols=177 Identities=10% Similarity=0.063 Sum_probs=113.2
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
.+||+|||+|.||+.||..|+++ | ++|++|++++++....-.+.+....+.+ .+..-.
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~a-G-----~~V~l~D~~~e~a~~~i~~~l~~~~~~G------------~l~~~~---- 111 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLA-G-----IETFLVVRNEQRCKQELEVMYAREKSFK------------RLNDKR---- 111 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHHHHHHHHHHHHTT------------SCCHHH----
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-C-----CeEEEEECcHHHHHHHHHHHHHHHHHcC------------CCCHHH----
Confidence 37999999999999999999999 8 9999999998733211111111111111 111000
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch--hHHHHHHHHHHHhhccCCCCEEEEEeecC
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST--ETKEVFEEISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~--~~~~vl~~i~~~l~~~~~~~iIIs~tkGi 200 (461)
. ++ ....+.+++|++ ++++||+||+|||.+ ..+++++++.+++++ ++++++.+.++
T Consensus 112 ---~--~~-------------~~~~i~~t~dl~-al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~---~aIlasnTSsl 169 (460)
T 3k6j_A 112 ---I--EK-------------INANLKITSDFH-KLSNCDLIVESVIEDMKLKKELFANLENICKS---TCIFGTNTSSL 169 (460)
T ss_dssp ---H--HH-------------HHTTEEEESCGG-GCTTCSEEEECCCSCHHHHHHHHHHHHTTSCT---TCEEEECCSSS
T ss_pred ---H--HH-------------HhcceEEeCCHH-HHccCCEEEEcCCCCHHHHHHHHHHHHhhCCC---CCEEEecCCCh
Confidence 0 00 012678889986 689999999999974 567889999999887 78888888776
Q ss_pred ccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEe--CChhHHHHHHHHhcCCCceEEecCChH
Q 012547 201 EAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDNGDLV 278 (461)
Q Consensus 201 ~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~--~~~~~~~~l~~ll~~~g~~v~~s~Di~ 278 (461)
+.. .+.+.+..+ .++.- .-|-.+.. ......++.+ .+++..+.+.+++...|..+....|.-
T Consensus 170 ~i~------------~ia~~~~~p-~r~iG-~HffnPv~--~m~LvEIv~g~~Ts~e~~~~~~~l~~~lGk~~v~v~d~p 233 (460)
T 3k6j_A 170 DLN------------EISSVLRDP-SNLVG-IHFFNPAN--VIRLVEIIYGSHTSSQAIATAFQACESIKKLPVLVGNCK 233 (460)
T ss_dssp CHH------------HHHTTSSSG-GGEEE-EECCSSTT--TCCEEEEECCSSCCHHHHHHHHHHHHHTTCEEEEESSCC
T ss_pred hHH------------HHHHhccCC-cceEE-EEecchhh--hCCEEEEEeCCCCCHHHHHHHHHHHHHhCCEEEEEeccc
Confidence 553 255555432 23221 11211111 1222222333 267888999999999998888777865
Q ss_pred H
Q 012547 279 T 279 (461)
Q Consensus 279 g 279 (461)
|
T Consensus 234 G 234 (460)
T 3k6j_A 234 S 234 (460)
T ss_dssp H
T ss_pred H
Confidence 5
No 77
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=99.02 E-value=1e-13 Score=130.37 Aligned_cols=160 Identities=13% Similarity=0.103 Sum_probs=109.0
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
.|||+|||+|+||+++|..|.+. | ++|++|+|+++ .+. +..
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~~~-G-----~~V~~~~r~~~-~~~--------------------------~~~------ 59 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKMLQC-G-----YSVVFGSRNPQ-VSS--------------------------LLP------ 59 (201)
Confidence 37899999999999999999998 8 89999999875 221 000
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecCcc
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~~ 202 (461)
.++.++ +++++++++|+||++||++++++++ ++.+.. + +++||++++|+..
T Consensus 60 -----------------------~g~~~~-~~~~~~~~aDvVilav~~~~~~~v~-~l~~~~-~---~~ivI~~~~G~~~ 110 (201)
T 2yjz_A 60 -----------------------RGAEVL-CYSEAASRSDVIVLAVHREHYDFLA-ELADSL-K---GRVLIDVSNNQKM 110 (201)
Confidence 012233 5566778999999999999998887 565543 3 5799999999963
Q ss_pred ccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhc-cCc----eEEEEeCChhHHHHHHHHhcCCCceEEecCCh
Q 012547 203 ELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYN-KEY----ANARICGAEKWRKPLAKFLRRPHFTVWDNGDL 277 (461)
Q Consensus 203 ~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~-g~~----~~~~~~~~~~~~~~l~~ll~~~g~~v~~s~Di 277 (461)
... ...-.+.+.+.++. .+ ++...|+++..+.. |.. +..+++.+++..+.++++|+..|++++...++
T Consensus 111 ~~~----~~~~~~~l~~~~~~--~~-vvra~~n~~a~~~~~g~l~g~~~~~~~g~~~~~~~~v~~ll~~~G~~~~~~G~l 183 (201)
T 2yjz_A 111 NQY----PESNAEYLAQLVPG--AH-VVKAFNTISAWALQSGTLDASRQVFVCGNDSKAKDRVMDIARTLGLTPLDQGSL 183 (201)
Confidence 100 00011345565542 22 46677888776554 321 12234455677889999999999988766654
No 78
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.33 E-value=1.5e-11 Score=121.88 Aligned_cols=152 Identities=21% Similarity=0.215 Sum_probs=102.1
Q ss_pred CceEEEEC-ccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 43 PLRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 43 ~mkI~IIG-aGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
++||+||| +|+||+++|..|++. | ++|++|+|+++.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~-G-----~~V~~~~~~~~~------------------------------------- 57 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRAS-G-----YPISILDREDWA------------------------------------- 57 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTT-T-----CCEEEECTTCGG-------------------------------------
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhC-C-----CeEEEEECCccc-------------------------------------
Confidence 35899999 999999999999998 8 899999877520
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecCc
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~ 201 (461)
++.+++++||+||+|||++.++++++++.+++++ +++|+.+ .|+.
T Consensus 58 -------------------------------~~~~~~~~aDvVilavp~~~~~~vl~~l~~~l~~---~~iv~~~-~svk 102 (298)
T 2pv7_A 58 -------------------------------VAESILANADVVIVSVPINLTLETIERLKPYLTE---NMLLADL-TSVK 102 (298)
T ss_dssp -------------------------------GHHHHHTTCSEEEECSCGGGHHHHHHHHGGGCCT---TSEEEEC-CSCC
T ss_pred -------------------------------CHHHHhcCCCEEEEeCCHHHHHHHHHHHHhhcCC---CcEEEEC-CCCC
Confidence 1234577899999999999999999999998876 5655544 4543
Q ss_pred cccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEeCChhHHHHHHHHhcCCCceEEecCChHHHH
Q 012547 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVTHE 281 (461)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~v~~s~Di~gve 281 (461)
.. ..+.+.+..+....+...+.||.. +...+.+..++.+.+++..+.++++|+..|++++..++....+
T Consensus 103 ~~---------~~~~~~~~~~~~~v~~hP~~g~~~--~~~~g~~~~l~~~~~~~~~~~v~~l~~~~G~~~~~~~~~~~d~ 171 (298)
T 2pv7_A 103 RE---------PLAKMLEVHTGAVLGLHPMFGADI--ASMAKQVVVRCDGRFPERYEWLLEQIQIWGAKIYQTNATEHDH 171 (298)
T ss_dssp HH---------HHHHHHHHCSSEEEEEEECSCTTC--SCCTTCEEEEEEEECGGGTHHHHHHHHHTTCEEEECCHHHHHH
T ss_pred cH---------HHHHHHHhcCCCEEeeCCCCCCCc--hhhcCCeEEEecCCCHHHHHHHHHHHHHcCCEEEECCHHHHHH
Confidence 32 112334433311001112345554 2334443333333467778999999999999887766543344
Q ss_pred HH
Q 012547 282 VM 283 (461)
Q Consensus 282 ~~ 283 (461)
+.
T Consensus 172 ~~ 173 (298)
T 2pv7_A 172 NM 173 (298)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 79
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=99.29 E-value=7.3e-11 Score=118.60 Aligned_cols=183 Identities=14% Similarity=0.161 Sum_probs=116.1
Q ss_pred CCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhh
Q 012547 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (461)
Q Consensus 40 ~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (461)
.....||+|||+|.||+.||..++.+ | ++|++|+++++.++...+ .+...+.... .. ..+.
T Consensus 3 ~p~~~~VaViGaG~MG~giA~~~a~~-G-----~~V~l~D~~~~~l~~~~~-~i~~~l~~~~-------~~-g~~~---- 63 (319)
T 3ado_A 3 SPAAGDVLIVGSGLVGRSWAMLFASG-G-----FRVKLYDIEPRQITGALE-NIRKEMKSLQ-------QS-GSLK---- 63 (319)
T ss_dssp ----CEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSCHHHHHHHHH-HHHHHHHHHH-------HT-TCCC----
T ss_pred CCCCCeEEEECCcHHHHHHHHHHHhC-C-----CeEEEEECCHHHHHHHHH-HHHHHHHHHH-------Hc-CCCC----
Confidence 33456899999999999999999999 8 999999999887664321 1111111000 00 0010
Q ss_pred hccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch--hHHHHHHHHHHHhhccCCCCEEEEEe
Q 012547 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST--ETKEVFEEISRYWKERITVPVIISLA 197 (461)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~--~~~~vl~~i~~~l~~~~~~~iIIs~t 197 (461)
. .+.+++. +..+..++|+++++++||+||.|||.. ..++++.+|.+++++ ++++.|.|
T Consensus 64 ---~-~~~~~~~-------------l~~i~~~~~l~~a~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~---~aIlaSNT 123 (319)
T 3ado_A 64 ---G-SLSAEEQ-------------LSLISSCTNLAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDD---RVVLSSSS 123 (319)
T ss_dssp ---S-SSCHHHH-------------HHTEEEECCHHHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCS---SSEEEECC
T ss_pred ---C-ccCHHHH-------------HhhcccccchHhHhccCcEEeeccccHHHHHHHHHHHHHHHhhh---cceeehhh
Confidence 0 0000001 125788999999999999999999975 688999999999988 78888888
Q ss_pred ecCccccccccccCCHHHHHHhHhCCCCCcEEEE--eCcchhHhhhccCceEEEEe--CChhHHHHHHHHhcCCCceE-E
Q 012547 198 KGVEAELEAVPRIITPTQMINRATGVPIENILYL--GGPNIASEIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTV-W 272 (461)
Q Consensus 198 kGi~~~~~~~~~~~~~se~i~~~lg~~~~~v~vl--sGPn~a~ev~~g~~~~~~~~--~~~~~~~~l~~ll~~~g~~v-~ 272 (461)
.|+... + +.+.+..| .++..+ ..|-. .-....++.+ .+++..+.+.+++...|... .
T Consensus 124 Ssl~is-----------~-ia~~~~~p-~r~ig~HffNP~~-----~m~LVEiv~g~~Ts~~~~~~~~~~~~~~gk~pv~ 185 (319)
T 3ado_A 124 SCLLPS-----------K-LFTGLAHV-KQCIVAHPVNPPY-----YIPLVELVPHPETSPATVDRTHALMRKIGQSPVR 185 (319)
T ss_dssp SSCCHH-----------H-HHTTCTTG-GGEEEEEECSSTT-----TCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEE
T ss_pred hhccch-----------h-hhhhccCC-CcEEEecCCCCcc-----ccchHHhcCCCCCcHHHHHHHHHHHHHhCCccCC
Confidence 777664 3 55545443 343222 22221 1112222322 35678888999998888665 4
Q ss_pred ecCChHH
Q 012547 273 DNGDLVT 279 (461)
Q Consensus 273 ~s~Di~g 279 (461)
+..|.-|
T Consensus 186 v~kd~pG 192 (319)
T 3ado_A 186 VLKEIDG 192 (319)
T ss_dssp CSSCCTT
T ss_pred cCCCCCC
Confidence 6677654
No 80
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.27 E-value=5.9e-11 Score=125.67 Aligned_cols=180 Identities=15% Similarity=0.144 Sum_probs=114.6
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
.+||+|||+|.||++||..|+++ | ++|++|+++++.++...+. +...++... .. ..+....
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~a-G-----~~V~l~D~~~e~l~~~~~~-i~~~l~~~~-------~~-g~~~~~~---- 65 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASH-G-----HQVLLYDISAEALTRAIDG-IHARLNSRV-------TR-GKLTAET---- 65 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSCHHHHHHHHHH-HHHHHHTTT-------TT-TSSCHHH----
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-C-----CeEEEEECCHHHHHHHHHH-HHHHHHHHH-------Hc-CCCCHHH----
Confidence 46899999999999999999999 8 9999999999887754321 111111000 00 0000000
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch--hHHHHHHHHHHHhhccCCCCEEEEEeecC
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST--ETKEVFEEISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~--~~~~vl~~i~~~l~~~~~~~iIIs~tkGi 200 (461)
.+++ ..++..++|++ ++++||+||+|||++ ..+++++++.+++++ ++++++.+.++
T Consensus 66 -----~~~~-------------~~~i~~~~~~~-~~~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~---~~IlasntSti 123 (483)
T 3mog_A 66 -----CERT-------------LKRLIPVTDIH-ALAAADLVIEAASERLEVKKALFAQLAEVCPP---QTLLTTNTSSI 123 (483)
T ss_dssp -----HHHH-------------HHTEEEECCGG-GGGGCSEEEECCCCCHHHHHHHHHHHHHHSCT---TCEEEECCSSS
T ss_pred -----HHHH-------------HhceeEeCCHH-HhcCCCEEEEcCCCcHHHHHHHHHHHHHhhcc---CcEEEecCCCC
Confidence 0000 12577888885 689999999999987 567899999999887 78888888887
Q ss_pred ccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEe--CChhHHHHHHHHhcCCCceEEecCChH
Q 012547 201 EAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDNGDLV 278 (461)
Q Consensus 201 ~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~--~~~~~~~~l~~ll~~~g~~v~~s~Di~ 278 (461)
+.. .+.+.+..+ .++ +-..|..+..+. ....++.+ .+++..+.+.+++...|..+....|.-
T Consensus 124 ~i~------------~ia~~~~~p-~~~-ig~hf~~Pa~v~--~Lvevv~g~~Ts~e~~~~~~~l~~~lGk~~v~v~d~~ 187 (483)
T 3mog_A 124 SIT------------AIAAEIKNP-ERV-AGLHFFNPAPVM--KLVEVVSGLATAAEVVEQLCELTLSWGKQPVRCHSTP 187 (483)
T ss_dssp CHH------------HHTTTSSSG-GGE-EEEEECSSTTTC--CEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CHH------------HHHHHccCc-cce-EEeeecChhhhC--CeEEEecCCCCCHHHHHHHHHHHHHhCCEEEEEeccC
Confidence 654 245544432 232 122233222222 22222222 257788999999999888776666754
Q ss_pred H
Q 012547 279 T 279 (461)
Q Consensus 279 g 279 (461)
|
T Consensus 188 G 188 (483)
T 3mog_A 188 G 188 (483)
T ss_dssp T
T ss_pred c
Confidence 4
No 81
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.24 E-value=1.5e-10 Score=114.97 Aligned_cols=183 Identities=17% Similarity=0.160 Sum_probs=120.2
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
.+||+|||+|.||+.||..|+ + | ++|++|+|+++.++...+. +..-
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-a-G-----~~V~v~d~~~~~~~~~~~~----------------------l~~~----- 57 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-S-K-----HEVVLQDVSEKALEAAREQ----------------------IPEE----- 57 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T-T-----SEEEEECSCHHHHHHHHHH----------------------SCGG-----
T ss_pred CCeEEEEeeCHHHHHHHHHHH-c-C-----CEEEEEECCHHHHHHHHHH----------------------HHHH-----
Confidence 479999999999999999999 9 8 9999999999876642110 1100
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchh--HHHHHHHHHHHhhccCCCCEEEEEeecC
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE--TKEVFEEISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~--~~~vl~~i~~~l~~~~~~~iIIs~tkGi 200 (461)
. +.++..++|+++ +++||+||.|+|... .+.++.++.++ + ++++++.+.++
T Consensus 58 --~-------------------~~~i~~~~~~~~-~~~aDlVieavpe~~~vk~~l~~~l~~~--~---~~IlasntSti 110 (293)
T 1zej_A 58 --L-------------------LSKIEFTTTLEK-VKDCDIVMEAVFEDLNTKVEVLREVERL--T---NAPLCSNTSVI 110 (293)
T ss_dssp --G-------------------GGGEEEESSCTT-GGGCSEEEECCCSCHHHHHHHHHHHHTT--C---CSCEEECCSSS
T ss_pred --H-------------------hCCeEEeCCHHH-HcCCCEEEEcCcCCHHHHHHHHHHHhcC--C---CCEEEEECCCc
Confidence 0 114677788876 899999999999764 56677888776 5 68777766666
Q ss_pred ccccccccccCCHHHHHHhHhCCCCCcE-E-EEeCcchhHhhhccCceEEEEe--CChhHHHHHHHHhcCCCceEEecCC
Q 012547 201 EAELEAVPRIITPTQMINRATGVPIENI-L-YLGGPNIASEIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDNGD 276 (461)
Q Consensus 201 ~~~~~~~~~~~~~se~i~~~lg~~~~~v-~-vlsGPn~a~ev~~g~~~~~~~~--~~~~~~~~l~~ll~~~g~~v~~s~D 276 (461)
.+. + +.+.+..+ .++ . -...|- ..+....++.+ .+++..+.+.+++...|..+....|
T Consensus 111 ~~~-----------~-~a~~~~~~-~r~~G~Hf~~Pv-----~~~~lveiv~g~~t~~~~~~~~~~l~~~lGk~~v~v~d 172 (293)
T 1zej_A 111 SVD-----------D-IAERLDSP-SRFLGVHWMNPP-----HVMPLVEIVISRFTDSKTVAFVEGFLRELGKEVVVCKG 172 (293)
T ss_dssp CHH-----------H-HHTTSSCG-GGEEEEEECSST-----TTCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEES
T ss_pred CHH-----------H-HHHHhhcc-cceEeEEecCcc-----ccCCEEEEECCCCCCHHHHHHHHHHHHHcCCeEEEecc
Confidence 553 2 44434322 122 1 112232 12222222333 3678889999999988877666666
Q ss_pred hHHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHHHHHHHHHHhCCCchhh
Q 012547 277 LVTHEVMGGLKNVYAIGAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKL 329 (461)
Q Consensus 277 i~gve~~galKNv~Ai~~Gi~~g~~n~~a~l~~~~~~Em~~l~~a~G~~~~t~ 329 (461)
. .+.- .++...++|...+++. |.+++++
T Consensus 173 ~------fi~N------------------rll~~~~~EA~~l~~~-Gv~~e~i 200 (293)
T 1zej_A 173 Q------SLVN------------------RFNAAVLSEASRMIEE-GVRAEDV 200 (293)
T ss_dssp S------CHHH------------------HHHHHHHHHHHHHHHH-TCCHHHH
T ss_pred c------ccHH------------------HHHHHHHHHHHHHHHh-CCCHHHH
Confidence 4 1111 1223468888888888 7787765
No 82
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.22 E-value=1.3e-10 Score=128.70 Aligned_cols=178 Identities=15% Similarity=0.159 Sum_probs=111.7
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
++||+|||+|.||+.||..|+++ | ++|++|+++++.++..... +...+.... ...+++...
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~a-G-----~~V~l~D~~~~~~~~~~~~-i~~~l~~~~--------~~G~~~~~~---- 372 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILS-N-----YPVILKEVNEKFLEAGIGR-VKANLQSRV--------RKGSMSQEK---- 372 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTT-T-----CCEEEECSSHHHHHHHHHH-HHHHHHHTT--------C----CTTH----
T ss_pred CcEEEEEcCCHhhHHHHHHHHhC-C-----CEEEEEECCHHHHHHHHHH-HHHHHHHHH--------hcCCCCHHH----
Confidence 46899999999999999999999 8 9999999999877653211 111110000 000011000
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchh--HHHHHHHHHHHhhccCCCCEEEEEeecC
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE--TKEVFEEISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~--~~~vl~~i~~~l~~~~~~~iIIs~tkGi 200 (461)
. +.....+..++|+ +++++||+||+|||.+. .++++.++.+++++ ++++++.++++
T Consensus 373 ---~---------------~~~~~~i~~~~d~-~~~~~aDlVIeaVpe~~~vk~~v~~~l~~~~~~---~~IlasntStl 430 (725)
T 2wtb_A 373 ---F---------------EKTMSLLKGSLDY-ESFRDVDMVIEAVIENISLKQQIFADLEKYCPQ---HCILASNTSTI 430 (725)
T ss_dssp ---H---------------HHTTTSEEEESSS-GGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCT---TCEEEECCSSS
T ss_pred ---H---------------HHHhcceEEeCCH-HHHCCCCEEEEcCcCCHHHHHHHHHHHHhhCCC---CcEEEeCCCCC
Confidence 0 0011357888888 57899999999999875 67888999999887 78888888777
Q ss_pred ccccccccccCCHHHHHHhHhCCCCCcEE--EEeCcchhHhhhccCceEEEEe--CChhHHHHHHHHhcCCCceEEecCC
Q 012547 201 EAELEAVPRIITPTQMINRATGVPIENIL--YLGGPNIASEIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDNGD 276 (461)
Q Consensus 201 ~~~~~~~~~~~~~se~i~~~lg~~~~~v~--vlsGPn~a~ev~~g~~~~~~~~--~~~~~~~~l~~ll~~~g~~v~~s~D 276 (461)
+.. + +.+.+..+ .++. ....|.. ......++.+ .+++..+.+.+++...|..+....|
T Consensus 431 ~i~-----------~-la~~~~~p-~~~iG~hf~~P~~-----~~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~d 492 (725)
T 2wtb_A 431 DLN-----------K-IGERTKSQ-DRIVGAHFFSPAH-----IMPLLEIVRTNHTSAQVIVDLLDVGKKIKKTPVVVGN 492 (725)
T ss_dssp CHH-----------H-HTTTCSCT-TTEEEEEECSSTT-----TCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEES
T ss_pred CHH-----------H-HHHHhcCC-CCEEEecCCCCcc-----cCceEEEEECCCCCHHHHHHHHHHHHHhCCEEEEECC
Confidence 653 2 44444332 2221 1112321 1112222233 2677889999999988877776666
Q ss_pred hHH
Q 012547 277 LVT 279 (461)
Q Consensus 277 i~g 279 (461)
..|
T Consensus 493 ~~G 495 (725)
T 2wtb_A 493 CTG 495 (725)
T ss_dssp STT
T ss_pred Ccc
Confidence 533
No 83
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.21 E-value=7.9e-11 Score=119.04 Aligned_cols=173 Identities=18% Similarity=0.189 Sum_probs=113.5
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhccC
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (461)
|||+|||+|+||+++|..|++. | ++|.+|+|+.+.... ....
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~-G-----~~V~~~~~~~~~~~~--------~a~~------------------------ 58 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDS-G-----VDVTVGLRSGSATVA--------KAEA------------------------ 58 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-T-----CCEEEECCTTCHHHH--------HHHH------------------------
T ss_pred CEEEEECchHHHHHHHHHHHHC-c-----CEEEEEECChHHHHH--------HHHH------------------------
Confidence 6899999999999999999998 8 899999998753211 0000
Q ss_pred CccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHH-HHHHHhhccCCCCEEEEEeecCcc
Q 012547 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFE-EISRYWKERITVPVIISLAKGVEA 202 (461)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~-~i~~~l~~~~~~~iIIs~tkGi~~ 202 (461)
.++.++ ++++++++||+||+|||++...++++ ++.+++++ +++|+++ +|+..
T Consensus 59 ----------------------~G~~~~-~~~e~~~~aDvVilavp~~~~~~v~~~~i~~~l~~---~~ivi~~-~gv~~ 111 (338)
T 1np3_A 59 ----------------------HGLKVA-DVKTAVAAADVVMILTPDEFQGRLYKEEIEPNLKK---GATLAFA-HGFSI 111 (338)
T ss_dssp ----------------------TTCEEE-CHHHHHHTCSEEEECSCHHHHHHHHHHHTGGGCCT---TCEEEES-CCHHH
T ss_pred ----------------------CCCEEc-cHHHHHhcCCEEEEeCCcHHHHHHHHHHHHhhCCC---CCEEEEc-CCchh
Confidence 023344 78888899999999999999999998 99998887 6777754 56543
Q ss_pred ccccccccCCHHHHHHhHhCCCCCcEE--EEeCcchhH-hh---hccCceEEEEe--CChhHHHHHHHHhcCCCc-e--E
Q 012547 203 ELEAVPRIITPTQMINRATGVPIENIL--YLGGPNIAS-EI---YNKEYANARIC--GAEKWRKPLAKFLRRPHF-T--V 271 (461)
Q Consensus 203 ~~~~~~~~~~~se~i~~~lg~~~~~v~--vlsGPn~a~-ev---~~g~~~~~~~~--~~~~~~~~l~~ll~~~g~-~--v 271 (461)
. +.+........+. .-.||+.+. ++ +.|.+..++.. .+.+..+.+.+++...|. + +
T Consensus 112 ~-------------~~~~~~~~~~~vv~~~P~gp~~a~~~l~~~G~g~~~ii~~~~~~~~~a~~~~~~l~~~lG~~~agv 178 (338)
T 1np3_A 112 H-------------YNQVVPRADLDVIMIAPKAPGHTVRSEFVKGGGIPDLIAIYQDASGNAKNVALSYACGVGGGRTGI 178 (338)
T ss_dssp H-------------TTSSCCCTTCEEEEEEESSCSHHHHHHHHTTCCCCEEEEEEECSSSCHHHHHHHHHHHTTHHHHCE
T ss_pred H-------------HHhhcCCCCcEEEeccCCCCchhHHHHHhccCCCeEEEEecCCCCHHHHHHHHHHHHHcCCCccce
Confidence 1 1121111111221 115676653 33 33776654442 345667788888888787 3 4
Q ss_pred Eec----C---ChHHHH--HHHHHHHHHHHHH
Q 012547 272 WDN----G---DLVTHE--VMGGLKNVYAIGA 294 (461)
Q Consensus 272 ~~s----~---Di~gve--~~galKNv~Ai~~ 294 (461)
... . |..+.. +||.+.++++.+.
T Consensus 179 ~~~~~~~~~~~~~~~s~~~l~G~lp~~ia~~~ 210 (338)
T 1np3_A 179 IETTFKDETETDLFGEQAVLCGGCVELVKAGF 210 (338)
T ss_dssp EECCHHHHHHHHHHHHHHTTTHHHHHHHHHHH
T ss_pred EeechhcccchHHHHHHHHHhhhHHHHHHHHH
Confidence 433 1 244433 5777888887664
No 84
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.20 E-value=8.9e-12 Score=122.12 Aligned_cols=150 Identities=15% Similarity=0.097 Sum_probs=85.3
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeE-EEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
+|||+|||+|+||++++..|+++ ++| .+|+|+++.++.+.+ .+
T Consensus 2 ~m~I~iIG~G~mG~~la~~l~~~-------~~v~~v~~~~~~~~~~~~~----------------------~~------- 45 (276)
T 2i76_A 2 SLVLNFVGTGTLTRFFLECLKDR-------YEIGYILSRSIDRARNLAE----------------------VY------- 45 (276)
T ss_dssp --CCEEESCCHHHHHHHHTTC-----------CCCEECSSHHHHHHHHH----------------------HT-------
T ss_pred CceEEEEeCCHHHHHHHHHHHHc-------CcEEEEEeCCHHHHHHHHH----------------------Hc-------
Confidence 47999999999999999998755 578 599999876543110 00
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecCc
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~ 201 (461)
+. .++|++++++++|+||+|||++.++++++++. .+ +++||+++.++.
T Consensus 46 -------------------------g~-~~~~~~~~~~~~DvVilav~~~~~~~v~~~l~---~~---~~ivi~~s~~~~ 93 (276)
T 2i76_A 46 -------------------------GG-KAATLEKHPELNGVVFVIVPDRYIKTVANHLN---LG---DAVLVHCSGFLS 93 (276)
T ss_dssp -------------------------CC-CCCSSCCCCC---CEEECSCTTTHHHHHTTTC---CS---SCCEEECCSSSC
T ss_pred -------------------------CC-ccCCHHHHHhcCCEEEEeCChHHHHHHHHHhc---cC---CCEEEECCCCCc
Confidence 11 33455556778999999999999999998875 33 678888886655
Q ss_pred cccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEeCChhHHHHHHHHhcCCCceEEec
Q 012547 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDN 274 (461)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~v~~s 274 (461)
... +++......++...++||....+...+.+. .++++++..+.++++|+..|.+++..
T Consensus 94 ~~~------------l~~~~~~~~~p~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~lG~~~~~v 152 (276)
T 2i76_A 94 SEI------------FKKSGRASIHPNFSFSSLEKALEMKDQIVF--GLEGDERGLPIVKKIAEEISGKYFVI 152 (276)
T ss_dssp GGG------------GCSSSEEEEEECSCC--CTTGGGCGGGCCE--EECCCTTTHHHHHHHHHHHCSCEEEC
T ss_pred HHH------------HHHhhccccchhhhcCCCchhHHHhCCCeE--EEEeChHHHHHHHHHHHHhCCCEEEE
Confidence 431 222111001122224453333332333322 33445555777788887767544433
No 85
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.19 E-value=3.2e-10 Score=125.40 Aligned_cols=181 Identities=13% Similarity=0.099 Sum_probs=111.3
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
..+||+|||+|.||+.||..|+++ | ++|++|+++++.++..... +...++... .+ -.+....
T Consensus 313 ~i~kV~VIGaG~MG~~iA~~la~a-G-----~~V~l~D~~~~~~~~~~~~-i~~~l~~~~------~~--G~~~~~~--- 374 (715)
T 1wdk_A 313 DVKQAAVLGAGIMGGGIAYQSASK-G-----TPILMKDINEHGIEQGLAE-AAKLLVGRV------DK--GRMTPAK--- 374 (715)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHHT-T-----CCEEEECSSHHHHHHHHHH-HHHHHHHHH------TT--TSSCHHH---
T ss_pred cCCEEEEECCChhhHHHHHHHHhC-C-----CEEEEEECCHHHHHHHHHH-HHHHHHHHH------hc--CCCCHHH---
Confidence 457899999999999999999999 8 9999999999877642110 100110000 00 0010000
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchh--HHHHHHHHHHHhhccCCCCEEEEEeec
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE--TKEVFEEISRYWKERITVPVIISLAKG 199 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~--~~~vl~~i~~~l~~~~~~~iIIs~tkG 199 (461)
. ++. ...+..++|+ +++++||+||+|||.+. .++++.++.+++++ +++++|.+++
T Consensus 375 ----~--~~~-------------~~~i~~~~d~-~~~~~aDlVIeaV~e~~~vk~~v~~~l~~~~~~---~~IlasntSt 431 (715)
T 1wdk_A 375 ----M--AEV-------------LNGIRPTLSY-GDFGNVDLVVEAVVENPKVKQAVLAEVENHVRE---DAILASNTST 431 (715)
T ss_dssp ----H--HHH-------------HHHEEEESSS-TTGGGCSEEEECCCSCHHHHHHHHHHHHTTSCT---TCEEEECCSS
T ss_pred ----H--HHH-------------hcCeEEECCH-HHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCC---CeEEEeCCCC
Confidence 0 000 0136778888 67899999999999764 67888999988887 7888888877
Q ss_pred CccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEeC--ChhHHHHHHHHhcCCCceEEecCCh
Q 012547 200 VEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICG--AEKWRKPLAKFLRRPHFTVWDNGDL 277 (461)
Q Consensus 200 i~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~~--~~~~~~~l~~ll~~~g~~v~~s~Di 277 (461)
++.. + +.+.+..+ .++.- .-+-.+. .......++.+. +++..+.+.+++...|..+....|.
T Consensus 432 l~i~-----------~-la~~~~~~-~~~ig-~hf~~P~--~~~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~d~ 495 (715)
T 1wdk_A 432 ISIS-----------L-LAKALKRP-ENFVG-MHFFNPV--HMMPLVEVIRGEKSSDLAVATTVAYAKKMGKNPIVVNDC 495 (715)
T ss_dssp SCHH-----------H-HGGGCSCG-GGEEE-EECCSST--TTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCHH-----------H-HHHHhcCc-cceEE-EEccCCc--ccCceEEEEECCCCCHHHHHHHHHHHHHhCCEeEEEcCC
Confidence 7553 2 44544332 23211 1111111 112222223332 6778899999999888777766665
Q ss_pred HH
Q 012547 278 VT 279 (461)
Q Consensus 278 ~g 279 (461)
.|
T Consensus 496 ~G 497 (715)
T 1wdk_A 496 PG 497 (715)
T ss_dssp TT
T ss_pred CC
Confidence 33
No 86
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.19 E-value=7e-10 Score=116.80 Aligned_cols=176 Identities=12% Similarity=0.098 Sum_probs=109.3
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
.+||+|||+|.||++||..|+.+ | ++|++|+++++.++..... +...+.. ++.. +.+.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~-G-----~~V~l~D~~~~~~~~~~~~-i~~~l~~-------------~~~~--g~~~ 94 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARV-G-----ISVVAVESDPKQLDAAKKI-ITFTLEK-------------EASR--AHQN 94 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEECSSHHHHHHHHHH-HHHHHHH-------------HHHH--HHHT
T ss_pred CCEEEEECcCHHHHHHHHHHHhC-C-----CeEEEEECCHHHHHHHHHH-HHHHHHH-------------HHHc--CCCC
Confidence 57899999999999999999999 8 9999999999877653321 0000000 0000 0000
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch--hHHHHHHHHHHHhhccCCCCEEEEEeecC
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST--ETKEVFEEISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~--~~~~vl~~i~~~l~~~~~~~iIIs~tkGi 200 (461)
.... + .....+++|+ +++++||+||+|||.+ ..+++++++.+++++ +++|++.++++
T Consensus 95 ~~~~---------------~--~~~~~i~~~~-~~~~~aDlVIeaVpe~~~~k~~v~~~l~~~~~~---~~ii~snTs~~ 153 (463)
T 1zcj_A 95 GQAS---------------A--KPKLRFSSST-KELSTVDLVVEAVFEDMNLKKKVFAELSALCKP---GAFLCTNTSAL 153 (463)
T ss_dssp TCCC---------------C--CCCEEEESCG-GGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCT---TCEEEECCSSS
T ss_pred HHHH---------------H--HHHhhhcCCH-HHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCC---CeEEEeCCCCc
Confidence 0000 0 0123457788 4689999999999986 467899999998887 78888877665
Q ss_pred ccccccccccCCHHHHHHhHhCCCCCcEE--EEeCcchhHhhhccCceEEEEe--CChhHHHHHHHHhcCCCceEEecCC
Q 012547 201 EAELEAVPRIITPTQMINRATGVPIENIL--YLGGPNIASEIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDNGD 276 (461)
Q Consensus 201 ~~~~~~~~~~~~~se~i~~~lg~~~~~v~--vlsGPn~a~ev~~g~~~~~~~~--~~~~~~~~l~~ll~~~g~~v~~s~D 276 (461)
... .+.+.+..+ .++. ....|.. ......++.+ .+++..+.+.+++...|..+.+..|
T Consensus 154 ~~~------------~la~~~~~~-~~~ig~hf~~P~~-----~~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~~ 215 (463)
T 1zcj_A 154 NVD------------DIASSTDRP-QLVIGTHFFSPAH-----VMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGVVVGN 215 (463)
T ss_dssp CHH------------HHHTTSSCG-GGEEEEEECSSTT-----TCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEBCC
T ss_pred CHH------------HHHHHhcCC-cceEEeecCCCcc-----cceeEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEECC
Confidence 443 355544432 2221 1122321 1222222332 4678888999998888877776666
Q ss_pred hHH
Q 012547 277 LVT 279 (461)
Q Consensus 277 i~g 279 (461)
..|
T Consensus 216 ~~g 218 (463)
T 1zcj_A 216 CYG 218 (463)
T ss_dssp STT
T ss_pred Ccc
Confidence 443
No 87
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.11 E-value=2.8e-10 Score=115.38 Aligned_cols=156 Identities=9% Similarity=0.086 Sum_probs=101.0
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
.+||+|||+|.||++||..|.++ | ++|++|+|+++.++... + +
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~-G-----~~V~~~dr~~~~~~~a~---------~--------------~-------- 50 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAA-N-----HSVFGYNRSRSGAKSAV---------D--------------E-------- 50 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSCHHHHHHHH---------H--------------T--------
T ss_pred CCEEEEEeecHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHHHH---------H--------------c--------
Confidence 57999999999999999999999 8 89999999987554310 0 0
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhc----CCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEee
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW----DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~----~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tk 198 (461)
++..++|++++++ ++|+||+|||...+.++++++.++ ++ +++|+.++
T Consensus 51 ------------------------G~~~~~~~~e~~~~a~~~aDlVilavP~~~~~~vl~~l~~~-~~---~~iv~Dv~- 101 (341)
T 3ktd_A 51 ------------------------GFDVSADLEATLQRAAAEDALIVLAVPMTAIDSLLDAVHTH-AP---NNGFTDVV- 101 (341)
T ss_dssp ------------------------TCCEESCHHHHHHHHHHTTCEEEECSCHHHHHHHHHHHHHH-CT---TCCEEECC-
T ss_pred ------------------------CCeeeCCHHHHHHhcccCCCEEEEeCCHHHHHHHHHHHHcc-CC---CCEEEEcC-
Confidence 2234566766654 479999999999999999999986 55 66665543
Q ss_pred cCccccccccccCCHHHHHHhHhCCCCCcE---EEEe-----CcchhH-hhhccCceEEEEe--CChh--------HHHH
Q 012547 199 GVEAELEAVPRIITPTQMINRATGVPIENI---LYLG-----GPNIAS-EIYNKEYANARIC--GAEK--------WRKP 259 (461)
Q Consensus 199 Gi~~~~~~~~~~~~~se~i~~~lg~~~~~v---~vls-----GPn~a~-ev~~g~~~~~~~~--~~~~--------~~~~ 259 (461)
++... +.+.+.+.+. ..++ .-+. ||..+. ++..+.+..++.. .+++ ..+.
T Consensus 102 Svk~~---------i~~~~~~~~~--~~~~v~~HPmaG~e~sG~~aa~~~Lf~g~~~iltp~~~~~~e~~~~~~~~~~~~ 170 (341)
T 3ktd_A 102 SVKTA---------VYDAVKARNM--QHRYVGSHPMAGTANSGWSASMDGLFKRAVWVVTFDQLFDGTDINSTWISIWKD 170 (341)
T ss_dssp SCSHH---------HHHHHHHTTC--GGGEECEEECCSCC-CCGGGCCSSTTTTCEEEECCGGGTSSCCCCHHHHHHHHH
T ss_pred CCChH---------HHHHHHHhCC--CCcEecCCccccccccchhhhhhHHhcCCeEEEEeCCCCChhhhccchHHHHHH
Confidence 33222 1123333321 1111 1233 333332 3445554443332 2345 6789
Q ss_pred HHHHhcCCCceEEecC
Q 012547 260 LAKFLRRPHFTVWDNG 275 (461)
Q Consensus 260 l~~ll~~~g~~v~~s~ 275 (461)
+.++|+..|.+++..+
T Consensus 171 v~~l~~~~Ga~v~~~~ 186 (341)
T 3ktd_A 171 VVQMALAVGAEVVPSR 186 (341)
T ss_dssp HHHHHHHTTCEEEECC
T ss_pred HHHHHHHcCCEEEEeC
Confidence 9999999997766543
No 88
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=99.10 E-value=1.9e-09 Score=113.12 Aligned_cols=154 Identities=14% Similarity=0.097 Sum_probs=103.1
Q ss_pred ceEEEECccHHHHHHHHHHHHh-----cCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhh
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDS-----YGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~-----~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~ 118 (461)
+||+|||.|+||.++|..|.++ .| ++|.++.|+....... ...
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s~~~~g~G-----~~ViVg~r~~sks~e~--------A~e------------------- 102 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDSLAEAKSD-----IVVKIGLRKGSKSFDE--------ARA------------------- 102 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHHHHHTTCC-----CEEEEEECTTCSCHHH--------HHH-------------------
T ss_pred CEEEEEeEhHHHHHHHHHHHhcccccCCC-----CEEEEEeCCchhhHHH--------HHH-------------------
Confidence 6899999999999999999875 14 7888777764322110 000
Q ss_pred hhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEee
Q 012547 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (461)
Q Consensus 119 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tk 198 (461)
.|+.. ......++++++++||+||++||.....+++++|.+++++ +++ |+++.
T Consensus 103 ---------------~G~~v--------~d~ta~s~aEAa~~ADVVILaVP~~~~~eVl~eI~p~LK~---GaI-Ls~Aa 155 (525)
T 3fr7_A 103 ---------------AGFTE--------ESGTLGDIWETVSGSDLVLLLISDAAQADNYEKIFSHMKP---NSI-LGLSH 155 (525)
T ss_dssp ---------------TTCCT--------TTTCEEEHHHHHHHCSEEEECSCHHHHHHHHHHHHHHSCT---TCE-EEESS
T ss_pred ---------------CCCEE--------ecCCCCCHHHHHhcCCEEEECCChHHHHHHHHHHHHhcCC---CCe-EEEeC
Confidence 01000 0011246788999999999999999888999999999987 565 78888
Q ss_pred cCccccccccccCCHHHHHHh---HhCCCCCcEEEEeCcchhHhh-------h-----ccCceEEEEeC--ChhHHHHHH
Q 012547 199 GVEAELEAVPRIITPTQMINR---ATGVPIENILYLGGPNIASEI-------Y-----NKEYANARICG--AEKWRKPLA 261 (461)
Q Consensus 199 Gi~~~~~~~~~~~~~se~i~~---~lg~~~~~v~vlsGPn~a~ev-------~-----~g~~~~~~~~~--~~~~~~~l~ 261 (461)
|+... .+.+ .++. .. -+++.+||.+-.+ + .|.++.+.+.. +.+..+.+.
T Consensus 156 Gf~I~------------~le~~~i~~p~-dv-~VVrVmPNtPg~~VR~~y~~G~~~~g~Gv~~liAv~qd~tgea~e~al 221 (525)
T 3fr7_A 156 GFLLG------------HLQSAGLDFPK-NI-SVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVAL 221 (525)
T ss_dssp SHHHH------------HHHHTTCCCCT-TS-EEEEEEESSCHHHHHHHHHHHTTSTTCSCCEEEEEEECSSSCHHHHHH
T ss_pred CCCHH------------HHhhhcccCCC-CC-cEEEEecCCCchhHHHHHhcccccccCCccEEEEcCCCCCHHHHHHHH
Confidence 98754 3443 2221 12 3678899887765 3 56665554433 345667777
Q ss_pred HHhcCCCce
Q 012547 262 KFLRRPHFT 270 (461)
Q Consensus 262 ~ll~~~g~~ 270 (461)
+++...|..
T Consensus 222 ala~aiG~~ 230 (525)
T 3fr7_A 222 GWSVALGSP 230 (525)
T ss_dssp HHHHHTTCS
T ss_pred HHHHHCCCC
Confidence 777776654
No 89
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=98.95 E-value=5.8e-09 Score=105.21 Aligned_cols=106 Identities=12% Similarity=0.180 Sum_probs=76.3
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~-~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
+|||+|||+|+||+++|..|+.+ | + +|.+|+++++.++....+ +... + .++.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~-g-----~~~V~L~D~~~~~~~~~~~~-----l~~~---------~-~~~~------ 61 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALR-E-----LADVVLYDVVKGMPEGKALD-----LSHV---------T-SVVD------ 61 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-T-----CCEEEEECSSSSHHHHHHHH-----HHHH---------H-HHTT------
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CCeEEEEECChhHHHHHHHH-----HHhh---------h-hccC------
Confidence 48999999999999999999999 8 6 899999998776641110 1100 1 0111
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcC--Cch-------------------hHHHHHHHH
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL--PST-------------------ETKEVFEEI 180 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaV--ps~-------------------~~~~vl~~i 180 (461)
. ...+.+++|+++++++||+||+++ |.. .++++++++
T Consensus 62 ----~------------------~~~i~~t~d~~ea~~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i 119 (331)
T 1pzg_A 62 ----T------------------NVSVRAEYSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNI 119 (331)
T ss_dssp ----C------------------CCCEEEECSHHHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHH
T ss_pred ----C------------------CCEEEEeCCHHHHhCCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0 025788899988899999999998 532 277788888
Q ss_pred HHHhhccCCCCEEEEEeecCc
Q 012547 181 SRYWKERITVPVIISLAKGVE 201 (461)
Q Consensus 181 ~~~l~~~~~~~iIIs~tkGi~ 201 (461)
.++. + +.+++..+|-.+
T Consensus 120 ~~~~-p---~a~vi~~tNP~~ 136 (331)
T 1pzg_A 120 KKYC-P---KTFIIVVTNPLD 136 (331)
T ss_dssp HHHC-T---TCEEEECCSSHH
T ss_pred HHHC-C---CcEEEEEcCchH
Confidence 8876 3 577776776543
No 90
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=98.95 E-value=2.5e-09 Score=106.35 Aligned_cols=107 Identities=17% Similarity=0.294 Sum_probs=74.5
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCe--eEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhh
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~--~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (461)
++|||+|||+|+||+++|..|+.+ | + +|++|+|++++++... + + ++. . . .+..
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~-g-----~~~~V~l~d~~~~~~~~~~---~-~-~~~-~--------~-~~~~---- 60 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQR-G-----IAREIVLEDIAKERVEAEV---L-D-MQH-G--------S-SFYP---- 60 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT-T-----CCSEEEEECSSHHHHHHHH---H-H-HHH-T--------G-GGST----
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-C-----CCCEEEEEeCChhHHHHHH---H-H-HHh-h--------h-hhcC----
Confidence 458999999999999999999998 7 7 9999999976554100 0 0 011 0 0 0100
Q ss_pred hccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchh----------------HHHHHHHHHHH
Q 012547 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE----------------TKEVFEEISRY 183 (461)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~----------------~~~vl~~i~~~ 183 (461)
+ ..+..+++. +++++||+||++++... ++++++++.++
T Consensus 61 ---~----------------------~~v~~~~~~-~~~~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~ 114 (319)
T 1lld_A 61 ---T----------------------VSIDGSDDP-EICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV 114 (319)
T ss_dssp ---T----------------------CEEEEESCG-GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---C----------------------eEEEeCCCH-HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 134555565 46889999999996543 33788888885
Q ss_pred hhccCCCCEEEEEeecCccc
Q 012547 184 WKERITVPVIISLAKGVEAE 203 (461)
Q Consensus 184 l~~~~~~~iIIs~tkGi~~~ 203 (461)
.+ +++|++++||++..
T Consensus 115 -~~---~~~vi~~~Np~~~~ 130 (319)
T 1lld_A 115 -AP---NAIYMLITNPVDIA 130 (319)
T ss_dssp -CT---TSEEEECCSSHHHH
T ss_pred -CC---CceEEEecCchHHH
Confidence 44 68899999999765
No 91
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=98.93 E-value=6.2e-09 Score=104.01 Aligned_cols=123 Identities=11% Similarity=0.216 Sum_probs=85.4
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~-~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
++|||+|||+|+||+++|..|+.+ | + +|.+|+++++.++....+ +... +. +..
T Consensus 3 ~~~kI~VIGaG~~G~~ia~~la~~-g-----~~~V~l~D~~~~~~~~~~~~-----l~~~---------~~-~~~----- 56 (317)
T 2ewd_A 3 ERRKIAVIGSGQIGGNIAYIVGKD-N-----LADVVLFDIAEGIPQGKALD-----ITHS---------MV-MFG----- 56 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-T-----CCEEEEECSSSSHHHHHHHH-----HHHH---------HH-HHT-----
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-C-----CceEEEEeCCchHHHHHHHH-----HHhh---------hh-hcC-----
Confidence 358999999999999999999999 8 6 899999998766532100 0000 00 000
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcC--------------C--chhHHHHHHHHHHHh
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL--------------P--STETKEVFEEISRYW 184 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaV--------------p--s~~~~~vl~~i~~~l 184 (461)
. ...+..++|+ +++++||+||+++ | ...++++++++.++.
T Consensus 57 -----~------------------~~~i~~t~d~-~a~~~aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~ 112 (317)
T 2ewd_A 57 -----S------------------TSKVIGTDDY-ADISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYC 112 (317)
T ss_dssp -----C------------------CCCEEEESCG-GGGTTCSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHC
T ss_pred -----C------------------CcEEEECCCH-HHhCCCCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHC
Confidence 0 0146777888 6789999999999 3 245788889998875
Q ss_pred hccCCCCEEEEEeecCccccccccccCCHHHHHHhHhCCCCCcE
Q 012547 185 KERITVPVIISLAKGVEAELEAVPRIITPTQMINRATGVPIENI 228 (461)
Q Consensus 185 ~~~~~~~iIIs~tkGi~~~~~~~~~~~~~se~i~~~lg~~~~~v 228 (461)
+ +++++.++|+.... ...+++..+.|..++
T Consensus 113 ~----~~iii~~sNp~~~~----------~~~~~~~~~~~~~rv 142 (317)
T 2ewd_A 113 P----NAFVICITNPLDVM----------VSHFQKVSGLPHNKV 142 (317)
T ss_dssp T----TSEEEECCSSHHHH----------HHHHHHHHCCCGGGE
T ss_pred C----CcEEEEeCChHHHH----------HHHHHHhhCCCHHHE
Confidence 4 57888899876542 345666666543453
No 92
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=98.88 E-value=1.2e-08 Score=101.56 Aligned_cols=105 Identities=17% Similarity=0.179 Sum_probs=74.9
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhccC
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (461)
|||+|||+|+||+++|..|+.+ |. .++|.+|++++++++.+..+ +.. . +. +++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~-g~---~~~V~l~d~~~~~~~~~~~~-----l~~-~--------~~-~~~-------- 54 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQ-GV---ADDYVFIDANEAKVKADQID-----FQD-A--------MA-NLE-------- 54 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TC---CSEEEEECSSHHHHHHHHHH-----HHH-H--------GG-GSS--------
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CC---CCEEEEEcCCHHHHHHHHHH-----HHh-h--------hh-hcC--------
Confidence 7999999999999999999998 73 16899999998766542211 110 0 00 110
Q ss_pred CccchhhhhhhcccccCCCCCCCCeEE-ecCHHHHhcCCCEEEEcCCchh--------------------HHHHHHHHHH
Q 012547 124 RTLHADEILKDGFCLNMIDTPLCPLKV-VTNLQEAVWDADIVINGLPSTE--------------------TKEVFEEISR 182 (461)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~-t~dl~~av~~aDiIIiaVps~~--------------------~~~vl~~i~~ 182 (461)
..+.+ ++|+ +++++||+||+++|+.. ++++++++.+
T Consensus 55 ----------------------~~~~~~~~d~-~~~~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~ 111 (309)
T 1hyh_A 55 ----------------------AHGNIVINDW-AALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKE 111 (309)
T ss_dssp ----------------------SCCEEEESCG-GGGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHH
T ss_pred ----------------------CCeEEEeCCH-HHhCCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 02333 5677 67899999999999765 4788888877
Q ss_pred HhhccCCCCEEEEEeecCcc
Q 012547 183 YWKERITVPVIISLAKGVEA 202 (461)
Q Consensus 183 ~l~~~~~~~iIIs~tkGi~~ 202 (461)
+.. ++.++.++|+++.
T Consensus 112 ~~~----~~~ii~~tNp~~~ 127 (309)
T 1hyh_A 112 SGF----HGVLVVISNPVDV 127 (309)
T ss_dssp TTC----CSEEEECSSSHHH
T ss_pred HCC----CcEEEEEcCcHHH
Confidence 653 5677889998765
No 93
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=98.85 E-value=1.5e-08 Score=102.08 Aligned_cols=105 Identities=17% Similarity=0.233 Sum_probs=74.4
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~-~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
+|||+|||+|.||+++|..|+.+ | + +|.+|+++++.++.... . +... +. ++.
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~-g-----~~~V~L~Di~~~~l~~~~~-~----l~~~---------~~-~~~------ 66 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQK-D-----LGDVYMFDIIEGVPQGKAL-D----LNHC---------MA-LIG------ 66 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECSSTTHHHHHHH-H----HHHH---------HH-HHT------
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CCeEEEEECCHHHHHHHHH-H----HHhH---------hh-ccC------
Confidence 47999999999999999999998 8 6 89999999877663110 0 1110 00 000
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcC--Cc--------------hhHHHHHHHHHHHhh
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL--PS--------------TETKEVFEEISRYWK 185 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaV--ps--------------~~~~~vl~~i~~~l~ 185 (461)
. ...+..++|+ +++++||+||+++ |. ..++++++++.++.
T Consensus 67 ----~------------------~~~i~~t~d~-~al~~aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~- 122 (328)
T 2hjr_A 67 ----S------------------PAKIFGENNY-EYLQNSDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC- 122 (328)
T ss_dssp ----C------------------CCCEEEESCG-GGGTTCSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-
T ss_pred ----C------------------CCEEEECCCH-HHHCCCCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-
Confidence 0 0257888898 7799999999998 43 23777888888876
Q ss_pred ccCCCCEEEEEeecCc
Q 012547 186 ERITVPVIISLAKGVE 201 (461)
Q Consensus 186 ~~~~~~iIIs~tkGi~ 201 (461)
+ +.+++.++|.+.
T Consensus 123 p---~a~viv~tNP~~ 135 (328)
T 2hjr_A 123 P---NAFVICITNPLD 135 (328)
T ss_dssp T---TCEEEECCSSHH
T ss_pred C---CeEEEEecCchH
Confidence 4 567776777543
No 94
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=98.79 E-value=8.8e-08 Score=106.14 Aligned_cols=177 Identities=13% Similarity=0.118 Sum_probs=115.4
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhccC
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (461)
.||+|||+|.||+.||..++.+ | ++|++++++++.++...+ .+...++.... + ..... .
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~a-G-----~~V~l~D~~~~~l~~~~~-~i~~~l~~~~~------~--~~~~~------~ 375 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARV-G-----ISVVAVESDPKQLDAAKK-IITFTLEKEAS------R--AHQNG------Q 375 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-T-----CEEEEECSSHHHHHHHHH-HHHHHHHHHHH------H--HHTTT------C
T ss_pred cEEEEEcccHHHHHHHHHHHhC-C-----CchhcccchHhhhhhHHH-HHHHHHHHHHH------h--ccccc------h
Confidence 6999999999999999999999 8 999999999987765332 11111111100 0 00000 0
Q ss_pred CccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch--hHHHHHHHHHHHhhccCCCCEEEEEeecCc
Q 012547 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST--ETKEVFEEISRYWKERITVPVIISLAKGVE 201 (461)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~--~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~ 201 (461)
+.....+..++|.++ +++||+||.||+.. ..+++++++.+++++ ++++.|.|.+++
T Consensus 376 ------------------~~~~~~~~~~~~~~~-l~~aDlVIEAV~E~l~iK~~vf~~le~~~~~---~aIlASNTSsl~ 433 (742)
T 3zwc_A 376 ------------------ASAKPKLRFSSSTKE-LSTVDLVVEAVFEDMNLKKKVFAELSALCKP---GAFLCTNTSALN 433 (742)
T ss_dssp ------------------CCCCCCEEEESCGGG-GGSCSEEEECCCSCHHHHHHHHHHHHHHSCT---TCEEEECCSSSC
T ss_pred ------------------hhhhhhhcccCcHHH-HhhCCEEEEeccccHHHHHHHHHHHhhcCCC---CceEEecCCcCC
Confidence 001235778888765 79999999999975 788999999999998 788888887776
Q ss_pred cccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEe--CChhHHHHHHHHhcCCCceEEecCChHH
Q 012547 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARIC--GAEKWRKPLAKFLRRPHFTVWDNGDLVT 279 (461)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~--~~~~~~~~l~~ll~~~g~~v~~s~Di~g 279 (461)
.. + |.+.+..| .+++.+ .|...+..-....++.+ .+++..+.+.++....|....+..|.-|
T Consensus 434 i~-----------~-ia~~~~~p-~r~ig~---HFfnP~~~m~LVEvi~g~~Ts~e~~~~~~~~~~~lgK~pV~vkd~pG 497 (742)
T 3zwc_A 434 VD-----------D-IASSTDRP-QLVIGT---HFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGVVVGNCYG 497 (742)
T ss_dssp HH-----------H-HHTTSSCG-GGEEEE---ECCSSTTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEECCCSTT
T ss_pred hH-----------H-HHhhcCCc-cccccc---cccCCCCCCceEEEecCCCCCHHHHHHHHHHHHHhCCCCcccCCCCC
Confidence 54 3 55555543 343222 22111111122233322 3567788888888888887777778555
No 95
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=98.78 E-value=3.4e-08 Score=98.93 Aligned_cols=103 Identities=17% Similarity=0.218 Sum_probs=72.5
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCe--eEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~--~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
|||+|||+|+||+++|..|+.+ | + +|.+|++++++++.+.. .+... .+ +..
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~-g-----~~~~V~l~D~~~~~~~~~~~-----~l~~~---------~~-~~~------ 53 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMK-G-----FAREMVLIDVDKKRAEGDAL-----DLIHG---------TP-FTR------ 53 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-T-----CCSEEEEECSSHHHHHHHHH-----HHHHH---------GG-GSC------
T ss_pred CEEEEECCCHHHHHHHHHHHhC-C-----CCCeEEEEeCChHHHHHHHH-----HHHhh---------hh-hcC------
Confidence 7999999999999999999999 8 6 99999999876654211 01100 00 110
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchh----------------HHHHHHHHHHHhh
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE----------------TKEVFEEISRYWK 185 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~----------------~~~vl~~i~~~l~ 185 (461)
. ..+.. +|. +++++||+||+++|... ++++++++.++.
T Consensus 54 -~----------------------~~i~~-~d~-~~~~~aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~- 107 (319)
T 1a5z_A 54 -R----------------------ANIYA-GDY-ADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYA- 107 (319)
T ss_dssp -C----------------------CEEEE-CCG-GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred -C----------------------cEEEe-CCH-HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-
Confidence 0 12444 464 56899999999998633 577888888775
Q ss_pred ccCCCCEEEEEeecCcc
Q 012547 186 ERITVPVIISLAKGVEA 202 (461)
Q Consensus 186 ~~~~~~iIIs~tkGi~~ 202 (461)
+ ++.+|.++|++..
T Consensus 108 ~---~~~ii~~tNp~~~ 121 (319)
T 1a5z_A 108 P---DSIVIVVTNPVDV 121 (319)
T ss_dssp T---TCEEEECSSSHHH
T ss_pred C---CeEEEEeCCcHHH
Confidence 3 5778888888764
No 96
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=98.72 E-value=7.2e-08 Score=96.13 Aligned_cols=107 Identities=16% Similarity=0.104 Sum_probs=72.1
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhccC
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (461)
|||+|||+|+||+++|..|+.+ +. .++|.+|++++++++.+.. -+... .+.. ..
T Consensus 1 mkI~VIGaG~vG~~la~~la~~-~~---g~~V~l~D~~~~~~~~~~~-----~l~~~-------------~~~~----~~ 54 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEK-QL---ARELVLLDVVEGIPQGKAL-----DMYES-------------GPVG----LF 54 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TC---CSEEEEECSSSSHHHHHHH-----HHHTT-------------HHHH----TC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CC---CCEEEEEeCChhHHHHHHH-----hHHhh-------------hhcc----cC
Confidence 7999999999999999999985 21 1899999999876653211 01100 0000 00
Q ss_pred CccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch----------------hHHHHHHHHHHHhhcc
Q 012547 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------------ETKEVFEEISRYWKER 187 (461)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~----------------~~~~vl~~i~~~l~~~ 187 (461)
...+.+++|+++ +++||+||+++|.. .++++++.+.++. +
T Consensus 55 ---------------------~~~i~~t~d~~~-l~~aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~- 110 (310)
T 1guz_A 55 ---------------------DTKVTGSNDYAD-TANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHS-K- 110 (310)
T ss_dssp ---------------------CCEEEEESCGGG-GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-S-
T ss_pred ---------------------CcEEEECCCHHH-HCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-C-
Confidence 014677788876 89999999999642 2356666666664 3
Q ss_pred CCCCEEEEEeecCcc
Q 012547 188 ITVPVIISLAKGVEA 202 (461)
Q Consensus 188 ~~~~iIIs~tkGi~~ 202 (461)
+..++.++|++..
T Consensus 111 --~~~viv~tNP~~~ 123 (310)
T 1guz_A 111 --NPIIIVVSNPLDI 123 (310)
T ss_dssp --SCEEEECCSSHHH
T ss_pred --CcEEEEEcCchHH
Confidence 5677778887653
No 97
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=98.69 E-value=4.8e-08 Score=93.80 Aligned_cols=129 Identities=9% Similarity=0.075 Sum_probs=87.9
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
..|||+|||+|.||++||..|.++ | ++|+.|++.+
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~-G-----~~V~~~~~~~--------------------------------------- 39 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSV-G-----HYVTVLHAPE--------------------------------------- 39 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHT-T-----CEEEECSSGG---------------------------------------
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHC-C-----CEEEEecCHH---------------------------------------
Confidence 458999999999999999999999 8 8999987631
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecCc
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~ 201 (461)
+ +.+|| |+|||.+.+.++++++.+++++ ++++++++-.+.
T Consensus 40 ----------------------------------~-~~~aD--ilavP~~ai~~vl~~l~~~l~~---g~ivvd~sgs~~ 79 (232)
T 3dfu_A 40 ----------------------------------D-IRDFE--LVVIDAHGVEGYVEKLSAFARR---GQMFLHTSLTHG 79 (232)
T ss_dssp ----------------------------------G-GGGCS--EEEECSSCHHHHHHHHHTTCCT---TCEEEECCSSCC
T ss_pred ----------------------------------H-hccCC--EEEEcHHHHHHHHHHHHHhcCC---CCEEEEECCcCH
Confidence 0 23578 9999999999999999998877 688887763332
Q ss_pred cccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEeCChhHHHHHHHHhcCCCceEEecCC
Q 012547 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGD 276 (461)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~v~~s~D 276 (461)
.. ++....... ..+ +-.-|-+ +. ..+....+++..+.+++++...|-+++..++
T Consensus 80 ~~------------vl~~~~~~g-~~f-vg~HPm~------g~-~~~i~a~d~~a~~~l~~L~~~lG~~vv~~~~ 133 (232)
T 3dfu_A 80 IT------------VMDPLETSG-GIV-MSAHPIG------QD-RWVASALDELGETIVGLLVGELGGSIVEIAD 133 (232)
T ss_dssp GG------------GGHHHHHTT-CEE-EEEEEEE------TT-EEEEEESSHHHHHHHHHHHHHTTCEECCCCG
T ss_pred HH------------HHHHHHhCC-CcE-EEeeeCC------CC-ceeeeCCCHHHHHHHHHHHHHhCCEEEEeCH
Confidence 22 222222111 111 1112332 21 2223344667788899999988888776654
No 98
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=98.67 E-value=1e-07 Score=94.56 Aligned_cols=123 Identities=11% Similarity=0.072 Sum_probs=78.3
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhccC
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (461)
|||+|||+|.||+++|..|+.+ |.. .+|.+|+++++.++... ++-.+ .++ +++.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~-~~~---~~v~L~D~~~~~~~g~~-------~dl~~-------~~~-~~~~------- 54 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLN-LDV---DEIALVDIAEDLAVGEA-------MDLAH-------AAA-GIDK------- 54 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-SCC---SEEEEECSSHHHHHHHH-------HHHHH-------HHH-TTTC-------
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCC---CeEEEEECChHHHHHHH-------HHHHh-------hhh-hcCC-------
Confidence 7999999999999999999998 721 28999999987765211 11111 011 1110
Q ss_pred CccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch----------------hHHHHHHHHHHHhhcc
Q 012547 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------------ETKEVFEEISRYWKER 187 (461)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~----------------~~~~vl~~i~~~l~~~ 187 (461)
...+.+++| .+++++||+||++.... .++++.+.+..+ .+
T Consensus 55 ---------------------~~~i~~t~d-~~a~~~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p- 110 (294)
T 1oju_A 55 ---------------------YPKIVGGAD-YSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-AP- 110 (294)
T ss_dssp ---------------------CCEEEEESC-GGGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT-ST-
T ss_pred ---------------------CCEEEEeCC-HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CC-
Confidence 014677778 67899999999987421 244444555554 23
Q ss_pred CCCCEEEEEeecCccccccccccCCHHHHHHhHhCCCCCcE
Q 012547 188 ITVPVIISLAKGVEAELEAVPRIITPTQMINRATGVPIENI 228 (461)
Q Consensus 188 ~~~~iIIs~tkGi~~~~~~~~~~~~~se~i~~~lg~~~~~v 228 (461)
+.+++.++|-++. +..++++..+.|..++
T Consensus 111 --~a~iivvsNPvd~----------~t~~~~k~~g~p~~rv 139 (294)
T 1oju_A 111 --ESKILVVTNPMDV----------MTYIMWKESGKPRNEV 139 (294)
T ss_dssp --TCEEEECSSSHHH----------HHHHHHHHSCCCTTSE
T ss_pred --CeEEEEeCCcchH----------HHHHHHHhcCCCHHHE
Confidence 5778878876543 2355666666554453
No 99
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=98.67 E-value=1.7e-07 Score=94.18 Aligned_cols=106 Identities=16% Similarity=0.174 Sum_probs=74.1
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~-~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
.+|||+|||+|.||+++|..|+.. | + +|.+|++++++++.... .++.. +...
T Consensus 3 ~~~kI~VIGaG~vG~~ia~~la~~-g-----~~~v~L~Di~~~~l~~~~~-----~l~~~-------------~~~~--- 55 (322)
T 1t2d_A 3 PKAKIVLVGSGMIGGVMATLIVQK-N-----LGDVVLFDIVKNMPHGKAL-----DTSHT-------------NVMA--- 55 (322)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECSSSSHHHHHHH-----HHHTH-------------HHHH---
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-C-----CCeEEEEeCCHHHHHHHHH-----HHHhh-------------hhhc---
Confidence 357999999999999999999998 7 5 79999999877653111 11110 0000
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcC--Cch-------------------hHHHHHHH
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL--PST-------------------ETKEVFEE 179 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaV--ps~-------------------~~~~vl~~ 179 (461)
.. ...+..++|+ +++++||+||+++ |.. .+++++++
T Consensus 56 -~~---------------------~~~i~~t~d~-~al~~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~ 112 (322)
T 1t2d_A 56 -YS---------------------NCKVSGSNTY-DDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGH 112 (322)
T ss_dssp -TC---------------------CCCEEEECCG-GGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHH
T ss_pred -CC---------------------CcEEEECCCH-HHhCCCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHH
Confidence 00 0257778898 7799999999998 531 47777788
Q ss_pred HHHHhhccCCCCEEEEEeecCc
Q 012547 180 ISRYWKERITVPVIISLAKGVE 201 (461)
Q Consensus 180 i~~~l~~~~~~~iIIs~tkGi~ 201 (461)
+.++. + +.+++.++|-..
T Consensus 113 i~~~~-p---~a~iiv~tNP~~ 130 (322)
T 1t2d_A 113 IKKNC-P---NAFIIVVTNPVD 130 (322)
T ss_dssp HHHHC-T---TSEEEECSSSHH
T ss_pred HHHHC-C---CeEEEEecCChH
Confidence 88776 4 577776776543
No 100
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=98.58 E-value=1.4e-07 Score=93.81 Aligned_cols=103 Identities=17% Similarity=0.119 Sum_probs=69.3
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCe--eEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~--~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
|||+|||+|.||+++|..|+.. | + +|.+|++++++++... .+-.+ .++ +..
T Consensus 1 mkI~VIGaG~vG~~la~~la~~-g-----~~~eV~L~D~~~~~~~~~~-------~~l~~-------~~~-~~~------ 53 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLR-G-----SCSELVLVDRDEDRAQAEA-------EDIAH-------AAP-VSH------ 53 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CCSEEEEECSSHHHHHHHH-------HHHTT-------SCC-TTS------
T ss_pred CEEEEECCCHHHHHHHHHHHhC-C-----CCCEEEEEeCCHHHHHHHH-------Hhhhh-------hhh-hcC------
Confidence 6999999999999999999998 7 6 8999999986554210 00000 000 110
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch----------------hHHHHHHHHHHHhh
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------------ETKEVFEEISRYWK 185 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~----------------~~~~vl~~i~~~l~ 185 (461)
+ ..+.. ++. +++++||+||++++.. .++++++++.++.
T Consensus 54 -~----------------------~~i~~-~~~-~a~~~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~- 107 (304)
T 2v6b_A 54 -G----------------------TRVWH-GGH-SELADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAA- 107 (304)
T ss_dssp -C----------------------CEEEE-ECG-GGGTTCSEEEECC------------CHHHHHHHHHHHHHHHHHHC-
T ss_pred -C----------------------eEEEE-CCH-HHhCCCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhC-
Confidence 0 12333 454 5789999999999533 3477888888874
Q ss_pred ccCCCCEEEEEeecCcc
Q 012547 186 ERITVPVIISLAKGVEA 202 (461)
Q Consensus 186 ~~~~~~iIIs~tkGi~~ 202 (461)
+ +++++.++|+.+.
T Consensus 108 p---~~~vi~~tNP~~~ 121 (304)
T 2v6b_A 108 P---DAVLLVTSNPVDL 121 (304)
T ss_dssp S---SSEEEECSSSHHH
T ss_pred C---CeEEEEecCchHH
Confidence 4 5777778988754
No 101
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=98.51 E-value=2.4e-07 Score=97.75 Aligned_cols=111 Identities=15% Similarity=0.226 Sum_probs=76.1
Q ss_pred CceEEEECccHH-HHHHHHHHHHhc-CCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 43 PLRIVGVGAGAW-GSVFTAMLQDSY-GYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 43 ~mkI~IIGaGam-G~alA~~La~~~-G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
+|||+|||+|+| |+++|..|+.+. + + +.++|.||++++++++.++. . .. .+++...
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~-l-~~~eV~L~Di~~e~~~~~~~-----~-~~------------~~l~~~~-- 85 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEE-F-PIRKLKLYDNDKERQDRIAG-----A-CD------------VFIREKA-- 85 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTT-S-CEEEEEEECSCHHHHHHHHH-----H-HH------------HHHHHHC--
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCC-C-CCCEEEEEeCCHHHHHHHHH-----H-HH------------HHhccCC--
Confidence 469999999999 777887777651 1 1 01789999999987765321 0 00 1222210
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchh----------------------------
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE---------------------------- 172 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~---------------------------- 172 (461)
+ ...+.+++|+++++++||+||+++|+..
T Consensus 86 -----~------------------~~~I~~t~D~~eal~~AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~ 142 (472)
T 1u8x_X 86 -----P------------------DIEFAATTDPEEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIA 142 (472)
T ss_dssp -----T------------------TSEEEEESCHHHHHSSCSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHH
T ss_pred -----C------------------CCEEEEECCHHHHHcCCCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHH
Confidence 1 0257888999889999999999999842
Q ss_pred --------HHHHHHHHHHHhhccCCCCEEEEEeecCcc
Q 012547 173 --------TKEVFEEISRYWKERITVPVIISLAKGVEA 202 (461)
Q Consensus 173 --------~~~vl~~i~~~l~~~~~~~iIIs~tkGi~~ 202 (461)
+.++++++.++.. ++.++..+|-++.
T Consensus 143 ~~~rni~i~~~i~~~i~~~~P----~A~ii~~TNPvdi 176 (472)
T 1u8x_X 143 YGMRSIGGVLEILDYMEKYSP----DAWMLNYSNPAAI 176 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT----TCEEEECCSCHHH
T ss_pred HHhhhHHHHHHHHHHHHHHCC----CeEEEEeCCcHHH
Confidence 4566666666654 5788888887754
No 102
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=98.48 E-value=2.5e-07 Score=93.40 Aligned_cols=93 Identities=18% Similarity=0.255 Sum_probs=72.0
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
..++|+|||+|.||.++|..+... | .+|.+|+|+.+..+
T Consensus 163 ~g~~vgIIG~G~iG~~vA~~l~~~-G-----~~V~~~dr~~~~~~----------------------------------- 201 (333)
T 3ba1_A 163 SGKRVGIIGLGRIGLAVAERAEAF-D-----CPISYFSRSKKPNT----------------------------------- 201 (333)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTT-T-----CCEEEECSSCCTTC-----------------------------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-C-----CEEEEECCCchhcc-----------------------------------
Confidence 447999999999999999999987 7 89999998864210
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch-hHHHHH-HHHHHHhhccCCCCEEEEEeec
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKG 199 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~-~~~~vl-~~i~~~l~~~~~~~iIIs~tkG 199 (461)
+.....++++++++||+|++++|.. .++.++ ++..+.+++ ++++|.++.|
T Consensus 202 -------------------------g~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~---gailIn~srG 253 (333)
T 3ba1_A 202 -------------------------NYTYYGSVVELASNSDILVVACPLTPETTHIINREVIDALGP---KGVLINIGRG 253 (333)
T ss_dssp -------------------------CSEEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCT---TCEEEECSCG
T ss_pred -------------------------CceecCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCC---CCEEEECCCC
Confidence 1223467888899999999999975 566666 345556676 7899999988
Q ss_pred Cccc
Q 012547 200 VEAE 203 (461)
Q Consensus 200 i~~~ 203 (461)
-..+
T Consensus 254 ~~vd 257 (333)
T 3ba1_A 254 PHVD 257 (333)
T ss_dssp GGBC
T ss_pred chhC
Confidence 6654
No 103
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=98.47 E-value=6.2e-07 Score=94.64 Aligned_cols=83 Identities=22% Similarity=0.254 Sum_probs=57.0
Q ss_pred CceEEEECccH--HHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 43 PLRIVGVGAGA--WGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 43 ~mkI~IIGaGa--mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
+|||+|||+|+ ||+++|..|+...+ + +.++|.+|++++++++.+... . ..+++...
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~-l-~~~eV~L~Di~~e~l~~~~~~-----~-------------~~~l~~~~-- 60 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPG-L-SGSTVTLMDIDEERLDAILTI-----A-------------KKYVEEVG-- 60 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGG-G-TTCEEEEECSCHHHHHHHHHH-----H-------------HHHHHHTT--
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCc-C-CCCEEEEEeCCHHHHHHHHHH-----H-------------HHHhccCC--
Confidence 47999999999 57888888874211 0 017999999999877653221 0 01222110
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCc
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS 170 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps 170 (461)
. ...+.+++|+++++++||+||+++|+
T Consensus 61 -----~------------------~~~I~~ttD~~eal~dAD~VIiaagv 87 (480)
T 1obb_A 61 -----A------------------DLKFEKTMNLDDVIIDADFVINTAMV 87 (480)
T ss_dssp -----C------------------CCEEEEESCHHHHHTTCSEEEECCCT
T ss_pred -----C------------------CcEEEEECCHHHHhCCCCEEEECCCc
Confidence 0 02578889998889999999999986
No 104
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=98.44 E-value=1.7e-06 Score=86.99 Aligned_cols=122 Identities=14% Similarity=0.186 Sum_probs=79.4
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~-~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
+|||+|||+|.||+++|..|+.. | + +|.+|++++++++.... + ++.. +. ++.
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~-~-----~~~v~L~Di~~~~~~g~~~----d-l~~~---------~~-~~~------ 59 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLK-E-----LGDVVLFDIAEGTPQGKGL----D-IAES---------SP-VDG------ 59 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECSSSSHHHHHHH----H-HHHH---------HH-HHT------
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CCeEEEEeCCchhHHHHHH----H-Hhch---------hh-hcC------
Confidence 47999999999999999999998 7 6 99999999877653110 0 1110 00 000
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCc----------------hhHHHHHHHHHHHhh
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS----------------TETKEVFEEISRYWK 185 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps----------------~~~~~vl~~i~~~l~ 185 (461)
. ...+.+++|. +++++||+||++... ..++++.+.+..+.
T Consensus 60 ----~------------------~~~v~~t~d~-~a~~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~- 115 (324)
T 3gvi_A 60 ----F------------------DAKFTGANDY-AAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYA- 115 (324)
T ss_dssp ----C------------------CCCEEEESSG-GGGTTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHC-
T ss_pred ----C------------------CCEEEEeCCH-HHHCCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHC-
Confidence 0 0146777887 679999999999742 12455556666654
Q ss_pred ccCCCCEEEEEeecCccccccccccCCHHHHHHhHhCCCCCcE
Q 012547 186 ERITVPVIISLAKGVEAELEAVPRIITPTQMINRATGVPIENI 228 (461)
Q Consensus 186 ~~~~~~iIIs~tkGi~~~~~~~~~~~~~se~i~~~lg~~~~~v 228 (461)
+ +.+++.++|-+..- ..++++..+.|..++
T Consensus 116 p---~a~iivvtNPvd~~----------t~~~~k~sg~p~~rv 145 (324)
T 3gvi_A 116 P---EAFVICITNPLDAM----------VWALQKFSGLPAHKV 145 (324)
T ss_dssp T---TCEEEECCSSHHHH----------HHHHHHHHCCCGGGE
T ss_pred C---CeEEEecCCCcHHH----------HHHHHHhcCCCHHHE
Confidence 3 57888888765432 244555555544443
No 105
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=98.43 E-value=1.5e-06 Score=86.56 Aligned_cols=105 Identities=14% Similarity=0.117 Sum_probs=69.6
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~-~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
+|||+|||+|.||+.+|..|+.. | + +|.++++++++++... .+ +... ....
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~~-g-----~~~v~L~Di~~~~~~g~~----~d-l~~~-------------~~~~---- 53 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAAK-E-----LGDIVLLDIVEGVPQGKA----LD-LYEA-------------SPIE---- 53 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CSEEEEECSSSSHHHHHH----HH-HHTT-------------HHHH----
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-C-----CCeEEEEeCCccHHHHHH----Hh-HHHh-------------Hhhc----
Confidence 37999999999999999999988 7 4 7999999987664211 00 1110 0000
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCc----------------hhHHHHHHHHHHHhh
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS----------------TETKEVFEEISRYWK 185 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps----------------~~~~~vl~~i~~~l~ 185 (461)
. ....+..++|. +++++||+||+++.. ..++++++.+.++.
T Consensus 54 ~---------------------~~~~i~~t~d~-~a~~~aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~- 110 (309)
T 1ur5_A 54 G---------------------FDVRVTGTNNY-ADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLS- 110 (309)
T ss_dssp T---------------------CCCCEEEESCG-GGGTTCSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGC-
T ss_pred C---------------------CCeEEEECCCH-HHHCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-
Confidence 0 00246777888 679999999999832 12345556666554
Q ss_pred ccCCCCEEEEEeecCc
Q 012547 186 ERITVPVIISLAKGVE 201 (461)
Q Consensus 186 ~~~~~~iIIs~tkGi~ 201 (461)
+ +.+++..+|-+.
T Consensus 111 p---~a~vi~~tNPv~ 123 (309)
T 1ur5_A 111 P---NAVIIMVNNPLD 123 (309)
T ss_dssp T---TCEEEECCSSHH
T ss_pred C---CeEEEEcCCchH
Confidence 3 567777777554
No 106
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=98.39 E-value=2.1e-06 Score=85.47 Aligned_cols=119 Identities=18% Similarity=0.229 Sum_probs=77.4
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
.++||+|||+|.||+++|..++.. |++ .+|.|+|++++ +.... .++. ...
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~-g~~---~ev~L~Di~~~-~~g~a----~dl~------------------~~~--- 62 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAK-GIA---DRLVLLDLSEG-TKGAT----MDLE------------------IFN--- 62 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHH-TCC---SEEEEECCC------CH----HHHH------------------HHT---
T ss_pred CCCEEEEECCCHHHHHHHHHHHhc-CCC---CEEEEEcCCcc-hHHHH----HHHh------------------hhc---
Confidence 457999999999999999999998 721 28999999875 32100 0010 000
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCc---------------hhHHHHHHHHHHHhhc
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS---------------TETKEVFEEISRYWKE 186 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps---------------~~~~~vl~~i~~~l~~ 186 (461)
...+..++|+ +++++||+||+++-. ..++++++++..+. +
T Consensus 63 -----------------------~~~i~~t~d~-~~l~~aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p 117 (303)
T 2i6t_A 63 -----------------------LPNVEISKDL-SASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYS-Q 117 (303)
T ss_dssp -----------------------CTTEEEESCG-GGGTTCSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred -----------------------CCCeEEeCCH-HHHCCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-C
Confidence 0146677888 679999999999721 23677788888876 4
Q ss_pred cCCCCEEEEEeecCccccccccccCCHHHHHHhHhCCCCCcE
Q 012547 187 RITVPVIISLAKGVEAELEAVPRIITPTQMINRATGVPIENI 228 (461)
Q Consensus 187 ~~~~~iIIs~tkGi~~~~~~~~~~~~~se~i~~~lg~~~~~v 228 (461)
+.+++.++|-+.. +++++++..+.|..++
T Consensus 118 ---~a~iiv~sNP~~~----------~t~~~~~~~~~p~~rv 146 (303)
T 2i6t_A 118 ---HSVLLVASQPVEI----------MTYVTWKLSTFPANRV 146 (303)
T ss_dssp ---TCEEEECSSSHHH----------HHHHHHHHHCCCGGGE
T ss_pred ---CeEEEEcCChHHH----------HHHHHHHhcCCCHHHe
Confidence 5777778885542 3456666655544453
No 107
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=98.38 E-value=2.5e-06 Score=85.23 Aligned_cols=109 Identities=15% Similarity=0.185 Sum_probs=69.8
Q ss_pred CCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhh
Q 012547 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (461)
Q Consensus 40 ~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (461)
+.+++||+|||+|.+|+++|..++.. |.. .+|.++|++++.++... .++... . .++.
T Consensus 3 ~~~~~kI~IIGaG~vG~sla~~l~~~-~~~---~ev~l~Di~~~~~~~~~----~dl~~~----------~-~~~~---- 59 (316)
T 1ldn_A 3 NNGGARVVVIGAGFVGASYVFALMNQ-GIA---DEIVLIDANESKAIGDA----MDFNHG----------K-VFAP---- 59 (316)
T ss_dssp TTTSCEEEEECCSHHHHHHHHHHHHH-TCC---SEEEEECSSHHHHHHHH----HHHHHH----------T-TSSS----
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHhC-CCC---CEEEEEeCCcchHHHHH----hhHHHH----------h-hhcC----
Confidence 44568999999999999999999888 632 48999999976443210 011100 0 0010
Q ss_pred hccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch----------------hHHHHHHHHHHH
Q 012547 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------------ETKEVFEEISRY 183 (461)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~----------------~~~~vl~~i~~~ 183 (461)
.+++++++..+++++||+||++++.. .++++++.+.++
T Consensus 60 --------------------------~~~~i~~~~~~al~~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~ 113 (316)
T 1ldn_A 60 --------------------------KPVDIWHGDYDDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMAS 113 (316)
T ss_dssp --------------------------SCCEEEECCGGGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------CCeEEEcCcHHHhCCCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHH
Confidence 02333344456799999999997542 355666666666
Q ss_pred hhccCCCCEEEEEeecCc
Q 012547 184 WKERITVPVIISLAKGVE 201 (461)
Q Consensus 184 l~~~~~~~iIIs~tkGi~ 201 (461)
.. +..++..+|-+.
T Consensus 114 ~p----~a~~iv~tNPv~ 127 (316)
T 1ldn_A 114 GF----QGLFLVATNPVD 127 (316)
T ss_dssp TC----CSEEEECSSSHH
T ss_pred CC----CCEEEEeCCchH
Confidence 43 566777777654
No 108
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=98.38 E-value=5e-07 Score=91.09 Aligned_cols=97 Identities=19% Similarity=0.281 Sum_probs=72.8
Q ss_pred CCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 41 ~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
...|+|+|||+|.||.++|..++.. | ++|.+|+|+.+. +.. . ..
T Consensus 148 l~g~~vgIIG~G~iG~~iA~~l~~~-G-----~~V~~~d~~~~~-~~~---------~-----------------~~--- 191 (334)
T 2dbq_A 148 VYGKTIGIIGLGRIGQAIAKRAKGF-N-----MRILYYSRTRKE-EVE---------R-----------------EL--- 191 (334)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCH-HHH---------H-----------------HH---
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhC-C-----CEEEEECCCcch-hhH---------h-----------------hc---
Confidence 3458999999999999999999988 8 899999998754 210 0 00
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchh-HHHHH-HHHHHHhhccCCCCEEEEEee
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-TKEVF-EEISRYWKERITVPVIISLAK 198 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~-~~~vl-~~i~~~l~~~~~~~iIIs~tk 198 (461)
++.. .++++++++||+|++++|... ++.++ +++.+.+++ ++++|.+++
T Consensus 192 --------------------------g~~~-~~l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~~mk~---~ailIn~sr 241 (334)
T 2dbq_A 192 --------------------------NAEF-KPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKK---TAILINIAR 241 (334)
T ss_dssp --------------------------CCEE-CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCT---TCEEEECSC
T ss_pred --------------------------Cccc-CCHHHHHhhCCEEEECCCCChHHHHhhCHHHHhcCCC---CcEEEECCC
Confidence 1233 477888899999999999765 55555 456666776 789999998
Q ss_pred cCccc
Q 012547 199 GVEAE 203 (461)
Q Consensus 199 Gi~~~ 203 (461)
|-..+
T Consensus 242 g~~v~ 246 (334)
T 2dbq_A 242 GKVVD 246 (334)
T ss_dssp GGGBC
T ss_pred CcccC
Confidence 86544
No 109
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=98.37 E-value=9e-07 Score=89.56 Aligned_cols=92 Identities=17% Similarity=0.277 Sum_probs=64.0
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
.-++|+|||.|.||.++|..+... | .+|..|+|+++.. .
T Consensus 170 ~gktiGIIGlG~IG~~vA~~l~~~-G-----~~V~~~dr~~~~~----------------------------~------- 208 (340)
T 4dgs_A 170 KGKRIGVLGLGQIGRALASRAEAF-G-----MSVRYWNRSTLSG----------------------------V------- 208 (340)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEECSSCCTT----------------------------S-------
T ss_pred cCCEEEEECCCHHHHHHHHHHHHC-C-----CEEEEEcCCcccc----------------------------c-------
Confidence 348999999999999999999877 7 8999999886310 0
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCC-chhHHHHH-HHHHHHhhccCCCCEEEEEeec
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLP-STETKEVF-EEISRYWKERITVPVIISLAKG 199 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVp-s~~~~~vl-~~i~~~l~~~~~~~iIIs~tkG 199 (461)
......++++++++||+|++++| ...++.++ ++..+.+++ ++++|.++.|
T Consensus 209 -------------------------~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~---gailIN~aRG 260 (340)
T 4dgs_A 209 -------------------------DWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGP---EGIVVNVARG 260 (340)
T ss_dssp -------------------------CCEECSSHHHHHHTCSEEEECC----------CHHHHHHTTT---TCEEEECSCC
T ss_pred -------------------------CceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCC---CCEEEECCCC
Confidence 12234678899999999999999 45666666 556666776 7899999888
Q ss_pred Ccc
Q 012547 200 VEA 202 (461)
Q Consensus 200 i~~ 202 (461)
=..
T Consensus 261 ~vv 263 (340)
T 4dgs_A 261 NVV 263 (340)
T ss_dssp ---
T ss_pred ccc
Confidence 443
No 110
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.36 E-value=4.1e-06 Score=74.32 Aligned_cols=104 Identities=21% Similarity=0.206 Sum_probs=67.3
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
.++|.|+|+|.||..++..|... | ++|++++++++.++.+.. .. +..... +
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~-g-----~~V~vid~~~~~~~~~~~--------~~---------g~~~~~------~ 69 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSS-G-----HSVVVVDKNEYAFHRLNS--------EF---------SGFTVV------G 69 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESCGGGGGGSCT--------TC---------CSEEEE------S
T ss_pred CCcEEEECCCHHHHHHHHHHHhC-C-----CeEEEEECCHHHHHHHHh--------cC---------CCcEEE------e
Confidence 37999999999999999999998 8 899999999876553210 00 000000 0
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHH-hcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecCc
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEA-VWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~a-v~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~ 201 (461)
+ ..-...+.++ +.++|+||+++|+......+..+.+.+.+ ...++..+++..
T Consensus 70 d------------------------~~~~~~l~~~~~~~ad~Vi~~~~~~~~~~~~~~~~~~~~~---~~~iv~~~~~~~ 122 (155)
T 2g1u_A 70 D------------------------AAEFETLKECGMEKADMVFAFTNDDSTNFFISMNARYMFN---VENVIARVYDPE 122 (155)
T ss_dssp C------------------------TTSHHHHHTTTGGGCSEEEECSSCHHHHHHHHHHHHHTSC---CSEEEEECSSGG
T ss_pred c------------------------CCCHHHHHHcCcccCCEEEEEeCCcHHHHHHHHHHHHHCC---CCeEEEEECCHH
Confidence 0 0000112222 57899999999998776666666654443 456777776654
Q ss_pred c
Q 012547 202 A 202 (461)
Q Consensus 202 ~ 202 (461)
.
T Consensus 123 ~ 123 (155)
T 2g1u_A 123 K 123 (155)
T ss_dssp G
T ss_pred H
Confidence 4
No 111
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=98.36 E-value=1.5e-06 Score=91.16 Aligned_cols=111 Identities=12% Similarity=0.139 Sum_probs=76.1
Q ss_pred CceEEEECccHH-HHHHHHHHHHh-cCCCCCCeeEEEEecCc--hhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhh
Q 012547 43 PLRIVGVGAGAW-GSVFTAMLQDS-YGYLRDKVLIRIWRRPG--RSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (461)
Q Consensus 43 ~mkI~IIGaGam-G~alA~~La~~-~G~~~~~~~V~l~~r~~--~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~ 118 (461)
+|||+|||+|+| |.+++..|+.+ .++ +.++|.||++++ ++++.++. + .. .+++..
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l--~~~ev~L~Di~~~~e~~~~~~~--~----~~------------~~~~~~- 65 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHEL--PVGELWLVDIPEGKEKLEIVGA--L----AK------------RMVEKA- 65 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTC--CEEEEEEECCGGGHHHHHHHHH--H----HH------------HHHHHT-
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCC--CCCEEEEEEcCCChHHHHHHHH--H----HH------------HHHhhc-
Confidence 589999999999 88888888872 121 017899999998 87765321 0 00 122211
Q ss_pred hhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchh--------------------------
Q 012547 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-------------------------- 172 (461)
Q Consensus 119 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~-------------------------- 172 (461)
.. ...+.+++|+.+++++||+||+++|+..
T Consensus 66 ------~~------------------~~~i~~t~D~~eal~gAD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~gg 121 (450)
T 1s6y_A 66 ------GV------------------PIEIHLTLDRRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGG 121 (450)
T ss_dssp ------TC------------------CCEEEEESCHHHHHTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHH
T ss_pred ------CC------------------CcEEEEeCCHHHHhCCCCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccch
Confidence 00 0147778999889999999999999632
Q ss_pred ----------HHHHHHHHHHHhhccCCCCEEEEEeecCcc
Q 012547 173 ----------TKEVFEEISRYWKERITVPVIISLAKGVEA 202 (461)
Q Consensus 173 ----------~~~vl~~i~~~l~~~~~~~iIIs~tkGi~~ 202 (461)
+.++++++..+.. ++.++..+|-++.
T Consensus 122 i~~~~rni~i~~~i~~~i~~~~P----~a~ii~~tNPvdi 157 (450)
T 1s6y_A 122 LFKGLRTIPVILDIIRDMEELCP----DAWLINFTNPAGM 157 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCT----TCEEEECSSSHHH
T ss_pred HHHHhhhHHHHHHHHHHHHHHCC----CeEEEEeCCcHHH
Confidence 4556666666654 5788888987754
No 112
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=98.36 E-value=4e-07 Score=91.57 Aligned_cols=95 Identities=18% Similarity=0.217 Sum_probs=70.2
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
..|+|+|||+|.||.++|..++.. | ++|.+|+|+.+..+.. ..
T Consensus 154 ~g~~vgIIG~G~iG~~iA~~l~~~-G-----~~V~~~d~~~~~~~~~--------------------------~~----- 196 (330)
T 2gcg_A 154 TQSTVGIIGLGRIGQAIARRLKPF-G-----VQRFLYTGRQPRPEEA--------------------------AE----- 196 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGG-T-----CCEEEEESSSCCHHHH--------------------------HT-----
T ss_pred CCCEEEEECcCHHHHHHHHHHHHC-C-----CEEEEECCCCcchhHH--------------------------Hh-----
Confidence 347999999999999999999988 8 8999999987543210 00
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch-hHHHHH-HHHHHHhhccCCCCEEEEEeec
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKG 199 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~-~~~~vl-~~i~~~l~~~~~~~iIIs~tkG 199 (461)
.++... ++++++++||+|++++|.. .++.++ +++.+.+++ ++++|.++.|
T Consensus 197 ------------------------~g~~~~-~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~---gailIn~srg 248 (330)
T 2gcg_A 197 ------------------------FQAEFV-STPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKE---TAVFINISRG 248 (330)
T ss_dssp ------------------------TTCEEC-CHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCT---TCEEEECSCG
T ss_pred ------------------------cCceeC-CHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCC---CcEEEECCCC
Confidence 023333 7888889999999999975 455555 455566776 6888888877
Q ss_pred Cc
Q 012547 200 VE 201 (461)
Q Consensus 200 i~ 201 (461)
-.
T Consensus 249 ~~ 250 (330)
T 2gcg_A 249 DV 250 (330)
T ss_dssp GG
T ss_pred cc
Confidence 43
No 113
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=98.35 E-value=1.4e-06 Score=91.27 Aligned_cols=107 Identities=17% Similarity=0.224 Sum_probs=75.7
Q ss_pred CceEEEECccH--HHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 43 PLRIVGVGAGA--WGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 43 ~mkI~IIGaGa--mG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
.|||+|||+|+ ||.+++..|+.. ..+ . .+|.+|+++++.++.++. +. .++...
T Consensus 5 ~~KIaVIGaGs~g~g~~la~~l~~~-~~~-~-geV~L~Di~~e~le~~~~------~~-------------~~l~~~--- 59 (450)
T 3fef_A 5 QIKIAYIGGGSQGWARSLMSDLSID-ERM-S-GTVALYDLDFEAAQKNEV------IG-------------NHSGNG--- 59 (450)
T ss_dssp CEEEEEETTTCSSHHHHHHHHHHHC-SSC-C-EEEEEECSSHHHHHHHHH------HH-------------TTSTTS---
T ss_pred CCEEEEECCChhHhHHHHHHHHHhc-ccc-C-CeEEEEeCCHHHHHHHHH------HH-------------HHHhcc---
Confidence 47999999999 689999999874 211 1 499999999987664321 00 011110
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch-----------------------------
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------------------------- 171 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~----------------------------- 171 (461)
...+.+|+|+++|+++||+||++++..
T Consensus 60 ------------------------~~~I~~TtD~~eAl~dADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GG 115 (450)
T 3fef_A 60 ------------------------RWRYEAVSTLKKALSAADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGG 115 (450)
T ss_dssp ------------------------CEEEEEESSHHHHHTTCSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHH
T ss_pred ------------------------CCeEEEECCHHHHhcCCCEEEeccccCCcccchhhhhhhhccCccccchhhcCCch
Confidence 015788999999999999999999742
Q ss_pred ---------hHHHHHHHHHHHhhccCCCCEEEEEeecCcc
Q 012547 172 ---------ETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (461)
Q Consensus 172 ---------~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~~ 202 (461)
.+.++++++..+.. +..+|..+|-++.
T Consensus 116 i~~alr~~~i~~~i~~~i~~~~p----~a~~i~~tNPvdi 151 (450)
T 3fef_A 116 IIRGLRAVPIFAEIARAIRDYAP----ESWVINYTNPMSV 151 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCT----TSEEEECCSSHHH
T ss_pred hhcccccHHHHHHHHHHHHHHCC----CeEEEEecCchHH
Confidence 15666666666643 5788888887654
No 114
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=98.35 E-value=2e-06 Score=86.07 Aligned_cols=41 Identities=10% Similarity=-0.034 Sum_probs=32.1
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (461)
++|||+|||+|++|++++..|+.. |.+ .+|.++|+++++++
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~-~~~---~ev~L~Di~~~~~~ 46 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALR-QTA---NELVLIDVFKEKAI 46 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHT-TCS---SEEEEECCC---CC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCC---CEEEEEeCChHHHH
Confidence 458999999999999999999988 621 28999999987655
No 115
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.33 E-value=1.5e-06 Score=74.55 Aligned_cols=39 Identities=18% Similarity=0.207 Sum_probs=34.3
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (461)
.|+|+|+|+|.+|..++..|.+. | ++|++++++++.++.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~-g-----~~v~~~d~~~~~~~~ 42 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEK-G-----HDIVLIDIDKDICKK 42 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CeEEEEECCHHHHHH
Confidence 37999999999999999999998 8 899999998876543
No 116
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=98.30 E-value=6.8e-07 Score=88.57 Aligned_cols=93 Identities=12% Similarity=0.161 Sum_probs=70.7
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
.-++|+|||.|.||.++|..+... | .+|..|+|+.+..+
T Consensus 121 ~g~tvGIIGlG~IG~~vA~~l~~~-G-----~~V~~~dr~~~~~~----------------------------------- 159 (290)
T 3gvx_A 121 YGKALGILGYGGIGRRVAHLAKAF-G-----MRVIAYTRSSVDQN----------------------------------- 159 (290)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH-T-----CEEEEECSSCCCTT-----------------------------------
T ss_pred ecchheeeccCchhHHHHHHHHhh-C-----cEEEEEeccccccc-----------------------------------
Confidence 347999999999999999999988 8 89999998864211
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCc-hhHHHHH-HHHHHHhhccCCCCEEEEEeec
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-TETKEVF-EEISRYWKERITVPVIISLAKG 199 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps-~~~~~vl-~~i~~~l~~~~~~~iIIs~tkG 199 (461)
.....+++++++++||+|++++|. ..++.++ ++..+.+++ ++++|.++.|
T Consensus 160 -------------------------~~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~---gailIN~aRG 211 (290)
T 3gvx_A 160 -------------------------VDVISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARK---NLTIVNVARA 211 (290)
T ss_dssp -------------------------CSEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCT---TCEEEECSCG
T ss_pred -------------------------cccccCChHHHhhccCeEEEEeeccccchhhhhHHHHhhhhc---CceEEEeehh
Confidence 123346788889999999999994 4555544 445556676 7899988877
Q ss_pred Cccc
Q 012547 200 VEAE 203 (461)
Q Consensus 200 i~~~ 203 (461)
-..+
T Consensus 212 ~~vd 215 (290)
T 3gvx_A 212 DVVS 215 (290)
T ss_dssp GGBC
T ss_pred cccC
Confidence 5444
No 117
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=98.29 E-value=3.9e-06 Score=84.42 Aligned_cols=41 Identities=17% Similarity=0.166 Sum_probs=34.9
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (461)
.+|||+|||+|.||+++|..|+.. |.+ .+|.++++++++++
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~-~~~---~~l~l~D~~~~k~~ 44 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQ-GIT---DELVVIDVNKEKAM 44 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHH-TCC---SEEEEECSCHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCC---ceEEEEecchHHHH
Confidence 468999999999999999999998 732 38999999887655
No 118
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.26 E-value=8.3e-07 Score=86.83 Aligned_cols=120 Identities=21% Similarity=0.231 Sum_probs=77.2
Q ss_pred cCcccccccchhHHhhHHHHHhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhH
Q 012547 14 SNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHL 93 (461)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l 93 (461)
.+|-+..+|-...--+.-|++. |. +...++|+|||+|.||.+++..|.+. | .+|++|+|+.++++.+.+
T Consensus 102 ~~g~~~g~nTd~~G~~~~l~~~-~~-~~~~~~v~iiGaG~~g~aia~~L~~~-g-----~~V~v~~r~~~~~~~l~~--- 170 (275)
T 2hk9_A 102 ENGKAYGYNTDWIGFLKSLKSL-IP-EVKEKSILVLGAGGASRAVIYALVKE-G-----AKVFLWNRTKEKAIKLAQ--- 170 (275)
T ss_dssp ETTEEEEECCHHHHHHHHHHHH-CT-TGGGSEEEEECCSHHHHHHHHHHHHH-T-----CEEEEECSSHHHHHHHTT---
T ss_pred eCCEEEeecCCHHHHHHHHHHh-CC-CcCCCEEEEECchHHHHHHHHHHHHc-C-----CEEEEEECCHHHHHHHHH---
Confidence 4565555554444444444432 22 23447999999999999999999998 8 799999999865543110
Q ss_pred HHHHhhhhhhHHhhhhcccccchhhhhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhH
Q 012547 94 FEVINSREDVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTET 173 (461)
Q Consensus 94 ~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~ 173 (461)
.+ ++.+.++++++++++|+||.|||....
T Consensus 171 -------------------~~--------------------------------g~~~~~~~~~~~~~aDiVi~atp~~~~ 199 (275)
T 2hk9_A 171 -------------------KF--------------------------------PLEVVNSPEEVIDKVQVIVNTTSVGLK 199 (275)
T ss_dssp -------------------TS--------------------------------CEEECSCGGGTGGGCSEEEECSSTTSS
T ss_pred -------------------Hc--------------------------------CCeeehhHHhhhcCCCEEEEeCCCCCC
Confidence 00 233444677778899999999998754
Q ss_pred HHHHHHH-HHHhhccCCCCEEEEEee
Q 012547 174 KEVFEEI-SRYWKERITVPVIISLAK 198 (461)
Q Consensus 174 ~~vl~~i-~~~l~~~~~~~iIIs~tk 198 (461)
.++...+ .+.+++ +++++.+..
T Consensus 200 ~~~~~~i~~~~l~~---g~~viDv~~ 222 (275)
T 2hk9_A 200 DEDPEIFNYDLIKK---DHVVVDIIY 222 (275)
T ss_dssp TTCCCSSCGGGCCT---TSEEEESSS
T ss_pred CCCCCCCCHHHcCC---CCEEEEcCC
Confidence 3211112 234555 677877764
No 119
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=98.26 E-value=8.7e-06 Score=81.67 Aligned_cols=122 Identities=16% Similarity=0.176 Sum_probs=78.2
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~-~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
+|||+|||+|.||+++|..|+.. | . +|.++++++++++.... -++.. .+..
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~-~-----~~~v~l~Di~~~~~~g~a~-----dL~~~-------------~~~~---- 56 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIK-Q-----LGDVVLFDIAQGMPNGKAL-----DLLQT-------------CPIE---- 56 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECSSSSHHHHHHH-----HHHTT-------------HHHH----
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CceEEEEeCChHHHHHHHH-----HHHhh-------------hhhc----
Confidence 47999999999999999999988 7 5 89999999876542110 01110 0000
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCc----------------hhHHHHHHHHHHHhh
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS----------------TETKEVFEEISRYWK 185 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps----------------~~~~~vl~~i~~~l~ 185 (461)
+. ...+..++|. +++++||+||++... ..++++.+.+..+.
T Consensus 57 ~~---------------------~~~v~~t~d~-~a~~~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~- 113 (321)
T 3p7m_A 57 GV---------------------DFKVRGTNDY-KDLENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNC- 113 (321)
T ss_dssp TC---------------------CCCEEEESCG-GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CC---------------------CcEEEEcCCH-HHHCCCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHC-
Confidence 00 0145666775 579999999999732 13555566666665
Q ss_pred ccCCCCEEEEEeecCccccccccccCCHHHHHHhHhCCCCCcE
Q 012547 186 ERITVPVIISLAKGVEAELEAVPRIITPTQMINRATGVPIENI 228 (461)
Q Consensus 186 ~~~~~~iIIs~tkGi~~~~~~~~~~~~~se~i~~~lg~~~~~v 228 (461)
+ +.+++.++|-+..- ..++++..+.|..++
T Consensus 114 p---~a~vivvtNPvd~~----------t~~~~k~sg~p~~rv 143 (321)
T 3p7m_A 114 P---NAFVICITNPLDIM----------VNMLQKFSGVPDNKI 143 (321)
T ss_dssp T---TCEEEECCSSHHHH----------HHHHHHHHCCCGGGE
T ss_pred C---CcEEEEecCchHHH----------HHHHHHhcCCCHHHE
Confidence 3 56777777765432 355666656554454
No 120
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=98.24 E-value=9.8e-07 Score=88.94 Aligned_cols=97 Identities=21% Similarity=0.316 Sum_probs=72.3
Q ss_pred CCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhh
Q 012547 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (461)
Q Consensus 40 ~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (461)
+-..++|+|||+|.||.++|..++.. | ++|.+|+|+.+. +.. . ..
T Consensus 143 ~l~g~~vgIIG~G~iG~~vA~~l~~~-G-----~~V~~~d~~~~~-~~~---------~-----------------~~-- 187 (333)
T 2d0i_A 143 SLYGKKVGILGMGAIGKAIARRLIPF-G-----VKLYYWSRHRKV-NVE---------K-----------------EL-- 187 (333)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGG-T-----CEEEEECSSCCH-HHH---------H-----------------HH--
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHC-C-----CEEEEECCCcch-hhh---------h-----------------hc--
Confidence 34457999999999999999999887 8 899999998753 210 0 00
Q ss_pred hccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch-hHHHHHH-HHHHHhhccCCCCEEEEEe
Q 012547 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVFE-EISRYWKERITVPVIISLA 197 (461)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~-~~~~vl~-~i~~~l~~~~~~~iIIs~t 197 (461)
++.. .++++++++||+|++++|.. .++.++. ++.+.+++ + ++|.++
T Consensus 188 ---------------------------g~~~-~~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~mk~---g-ilin~s 235 (333)
T 2d0i_A 188 ---------------------------KARY-MDIDELLEKSDIVILALPLTRDTYHIINEERVKKLEG---K-YLVNIG 235 (333)
T ss_dssp ---------------------------TEEE-CCHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHTBT---C-EEEECS
T ss_pred ---------------------------Ccee-cCHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhCCC---C-EEEECC
Confidence 1233 36778889999999999987 6666664 45566776 7 889888
Q ss_pred ecCccc
Q 012547 198 KGVEAE 203 (461)
Q Consensus 198 kGi~~~ 203 (461)
+|-..+
T Consensus 236 rg~~vd 241 (333)
T 2d0i_A 236 RGALVD 241 (333)
T ss_dssp CGGGBC
T ss_pred CCcccC
Confidence 886554
No 121
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=98.23 E-value=9.3e-06 Score=81.24 Aligned_cols=105 Identities=14% Similarity=0.154 Sum_probs=68.3
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecC--chhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhh
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRP--GRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~-~V~l~~r~--~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (461)
.+||+|||+|.||+++|..++.. | + +|.+|+++ ++.++... . ++ ... .+..
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~-g-----~~~v~l~D~~~~~~~~~g~a-~---dl-~~~-------------~~~~-- 61 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQK-E-----LADVVLVDIPQLENPTKGKA-L---DM-LEA-------------SPVQ-- 61 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECCGGGHHHHHHHH-H---HH-HHH-------------HHHH--
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CCeEEEEeccchHHHHHHhh-h---hH-HHh-------------hhhc--
Confidence 47999999999999999999998 7 7 99999998 44333211 0 01 000 0000
Q ss_pred hccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCc----------------hhHHHHHHHHHHH
Q 012547 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS----------------TETKEVFEEISRY 183 (461)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps----------------~~~~~vl~~i~~~ 183 (461)
+. ...+..++|. +++++||+||++... ..++++.+.+..+
T Consensus 62 --~~---------------------~~~i~~t~d~-~a~~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~ 117 (315)
T 3tl2_A 62 --GF---------------------DANIIGTSDY-ADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKH 117 (315)
T ss_dssp --TC---------------------CCCEEEESCG-GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --cC---------------------CCEEEEcCCH-HHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 00 0246667775 568999999999732 1345555666665
Q ss_pred hhccCCCCEEEEEeecCc
Q 012547 184 WKERITVPVIISLAKGVE 201 (461)
Q Consensus 184 l~~~~~~~iIIs~tkGi~ 201 (461)
.+ +..++.++|-..
T Consensus 118 ~p----~a~vlvvsNPvd 131 (315)
T 3tl2_A 118 SP----NAIIVVLTNPVD 131 (315)
T ss_dssp CT----TCEEEECCSSHH
T ss_pred CC----CeEEEECCChHH
Confidence 43 577888887654
No 122
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=98.23 E-value=8.1e-06 Score=81.33 Aligned_cols=103 Identities=17% Similarity=0.182 Sum_probs=70.4
Q ss_pred eEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhccC
Q 012547 45 RIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (461)
Q Consensus 45 kI~IIGaGamG~alA~~La~~~G~~~~~~-~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (461)
||+|||+|.+|+++|..++.. | . +|.++|+++++++... . + +... .... +.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~-~-----l~el~L~Di~~~~~~g~~-~---d-l~~~-------------~~~~----~~ 52 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR-G-----YDDLLLIARTPGKPQGEA-L---D-LAHA-------------AAEL----GV 52 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-T-----CSCEEEECSSTTHHHHHH-H---H-HHHH-------------HHHH----TC
T ss_pred CEEEECcCHHHHHHHHHHHhC-C-----CCEEEEEcCChhhHHHHH-H---H-HHHh-------------hhhc----CC
Confidence 799999999999999999988 7 4 7999999987664311 0 1 1110 0000 00
Q ss_pred CccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchh----------------HHHHHHHHHHHhhcc
Q 012547 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE----------------TKEVFEEISRYWKER 187 (461)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~----------------~~~vl~~i~~~l~~~ 187 (461)
...+..++|. +++++||+||++.+... ++++++++.++. +
T Consensus 53 ---------------------~~~i~~t~d~-~a~~~aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~-p- 108 (308)
T 2d4a_B 53 ---------------------DIRISGSNSY-EDMRGSDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYA-K- 108 (308)
T ss_dssp ---------------------CCCEEEESCG-GGGTTCSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHC-T-
T ss_pred ---------------------CeEEEECCCH-HHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHC-C-
Confidence 0146777787 67999999999975432 777777777775 3
Q ss_pred CCCCEEEEEeecCc
Q 012547 188 ITVPVIISLAKGVE 201 (461)
Q Consensus 188 ~~~~iIIs~tkGi~ 201 (461)
+..+|.++|-+.
T Consensus 109 --~a~iiv~tNPv~ 120 (308)
T 2d4a_B 109 --DAIVVITTNPVD 120 (308)
T ss_dssp --TCEEEECCSSHH
T ss_pred --CeEEEEeCCchH
Confidence 567777887554
No 123
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=98.21 E-value=1e-05 Score=80.99 Aligned_cols=41 Identities=22% Similarity=0.244 Sum_probs=34.5
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (461)
+.|||+|||+|++|++++..|+.. +.+ .++.++|+++++++
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~-~~~---~el~L~Di~~~~~~ 44 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQ-GIA---EEFVIVDVVKDRTK 44 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHH-TCC---SEEEEECSSHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHcC-CCC---CEEEEEeCCchHHH
Confidence 348999999999999999999988 632 38999999877655
No 124
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=98.21 E-value=8.6e-06 Score=81.84 Aligned_cols=110 Identities=19% Similarity=0.217 Sum_probs=70.7
Q ss_pred CCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhh
Q 012547 39 AEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (461)
Q Consensus 39 ~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~ 118 (461)
++.++|||+|||+|++|++++..|+.. +.+ .++.++|+++++++... .+ +... .+..
T Consensus 5 ~~~~~~KI~IiGaG~vG~~la~~l~~~-~~~---~el~L~Di~~~~~~g~~----~d-l~~~-------------~~~~- 61 (326)
T 2zqz_A 5 TDKDHQKVILVGDGAVGSSYAYAMVLQ-GIA---QEIGIVDIFKDKTKGDA----ID-LSNA-------------LPFT- 61 (326)
T ss_dssp -CCCCCEEEEECCSHHHHHHHHHHHHH-TCC---SEEEEECSCHHHHHHHH----HH-HHTT-------------GGGS-
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHHcC-CCC---CEEEEEeCCchHhHHHH----HH-HHHH-------------HHhc-
Confidence 455668999999999999999999988 632 38999999876654311 00 1110 0100
Q ss_pred hhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch----------------hHHHHHHHHHH
Q 012547 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------------ETKEVFEEISR 182 (461)
Q Consensus 119 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~----------------~~~~vl~~i~~ 182 (461)
.+++++.+..+++++||+||++.+.. .++++.+.+..
T Consensus 62 ---------------------------~~~~i~~~~~~a~~~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~ 114 (326)
T 2zqz_A 62 ---------------------------SPKKIYSAEYSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVD 114 (326)
T ss_dssp ---------------------------CCCEEEECCGGGGGGCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------CCeEEEECCHHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 13344445567799999999998542 24455555555
Q ss_pred HhhccCCCCEEEEEeecCcc
Q 012547 183 YWKERITVPVIISLAKGVEA 202 (461)
Q Consensus 183 ~l~~~~~~~iIIs~tkGi~~ 202 (461)
+. + +..++.++|-+..
T Consensus 115 ~~-p---~a~iiv~tNPv~~ 130 (326)
T 2zqz_A 115 SG-F---NGIFLVAANPVDI 130 (326)
T ss_dssp HT-C---CSEEEECSSSHHH
T ss_pred HC-C---CeEEEEeCCcHHH
Confidence 54 3 5677777776543
No 125
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=98.21 E-value=1.5e-06 Score=88.01 Aligned_cols=95 Identities=19% Similarity=0.173 Sum_probs=69.5
Q ss_pred CCCceEEEECccHHHHHHHHHHH-HhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhh
Q 012547 41 GDPLRIVGVGAGAWGSVFTAMLQ-DSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (461)
Q Consensus 41 ~~~mkI~IIGaGamG~alA~~La-~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (461)
...++|+|||.|.||.++|..+. .. | .+|..|+|+.+..+.. ...
T Consensus 161 l~g~~vgIIG~G~IG~~vA~~l~~~~-G-----~~V~~~d~~~~~~~~~--------------------------~~~-- 206 (348)
T 2w2k_A 161 PRGHVLGAVGLGAIQKEIARKAVHGL-G-----MKLVYYDVAPADAETE--------------------------KAL-- 206 (348)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTT-C-----CEEEEECSSCCCHHHH--------------------------HHH--
T ss_pred CCCCEEEEEEECHHHHHHHHHHHHhc-C-----CEEEEECCCCcchhhH--------------------------hhc--
Confidence 34479999999999999999998 77 7 8999999987543310 000
Q ss_pred hccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch-hHHHHH-HHHHHHhhccCCCCEEEEEe
Q 012547 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLA 197 (461)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~-~~~~vl-~~i~~~l~~~~~~~iIIs~t 197 (461)
++...+++++++++||+|++++|.. .++.++ +++.+.+++ ++++|.++
T Consensus 207 ---------------------------g~~~~~~l~ell~~aDvVil~vp~~~~t~~li~~~~l~~mk~---gailin~s 256 (348)
T 2w2k_A 207 ---------------------------GAERVDSLEELARRSDCVSVSVPYMKLTHHLIDEAFFAAMKP---GSRIVNTA 256 (348)
T ss_dssp ---------------------------TCEECSSHHHHHHHCSEEEECCCCSGGGTTCBCHHHHHHSCT---TEEEEECS
T ss_pred ---------------------------CcEEeCCHHHHhccCCEEEEeCCCChHHHHHhhHHHHhcCCC---CCEEEECC
Confidence 1233457888889999999999975 455555 345556676 67888877
Q ss_pred ec
Q 012547 198 KG 199 (461)
Q Consensus 198 kG 199 (461)
.|
T Consensus 257 rg 258 (348)
T 2w2k_A 257 RG 258 (348)
T ss_dssp CG
T ss_pred CC
Confidence 76
No 126
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=98.19 E-value=7.3e-06 Score=81.93 Aligned_cols=41 Identities=22% Similarity=0.240 Sum_probs=34.5
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (461)
++|||+|||+|++|++++..|+.. |.+ .+|.++++++++++
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~-~~~---~ei~L~Di~~~~~~ 45 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQ-SIV---DELVIIDLDTEKVR 45 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-CSC---SEEEEECSCHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCC---CEEEEEeCChhHhh
Confidence 458999999999999999999988 632 48999999876554
No 127
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=98.17 E-value=1e-05 Score=80.93 Aligned_cols=39 Identities=10% Similarity=0.155 Sum_probs=34.0
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (461)
|||+|||+|.||+++|..|+.. |+. .+|.++++++++++
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~-~~~---~el~l~D~~~~k~~ 39 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQ-DVA---KEVVMVDIKDGMPQ 39 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCS---SEEEEECSSTTHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCC---CEEEEEeCchHHHH
Confidence 7999999999999999999988 731 38999999987654
No 128
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=98.17 E-value=9e-06 Score=81.89 Aligned_cols=108 Identities=8% Similarity=-0.033 Sum_probs=73.3
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
..+||+|||+|.||+++|..++.. |++ .+|.+++++++.++.... + ++.. ..+..
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~-g~~---~ev~L~Di~~~~~~g~a~----D-L~~~----------~~~~~------ 74 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMK-DLA---DEVALVDVMEDKLKGEMM----D-LEHG----------SLFLH------ 74 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHH-CCC---SEEEEECSCHHHHHHHHH----H-HHHH----------GGGSC------
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCC---CeEEEEECCHHHHHHHHH----H-hhhh----------hhccc------
Confidence 458999999999999999999998 732 389999998876553110 0 1110 00100
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCc----------------hhHHHHHHHHHHHhh
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS----------------TETKEVFEEISRYWK 185 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps----------------~~~~~vl~~i~~~l~ 185 (461)
...+..++|+++ +++||+||++... ..++++.+++.++ .
T Consensus 75 -----------------------~~~i~~t~d~~~-~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~-~ 129 (330)
T 3ldh_A 75 -----------------------TAKIVSGKDYSV-SAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKH-S 129 (330)
T ss_dssp -----------------------CSEEEEESSSCS-CSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHH-C
T ss_pred -----------------------CCeEEEcCCHHH-hCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-C
Confidence 024667788875 8999999998632 2366677777777 3
Q ss_pred ccCCCCEEEEEeecCcc
Q 012547 186 ERITVPVIISLAKGVEA 202 (461)
Q Consensus 186 ~~~~~~iIIs~tkGi~~ 202 (461)
+ +..++.++|-...
T Consensus 130 P---~a~ilvvtNPvdi 143 (330)
T 3ldh_A 130 P---DCLKELHPELGTD 143 (330)
T ss_dssp T---TCEEEECSSSHHH
T ss_pred C---CceEEeCCCccHH
Confidence 3 5778888876543
No 129
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=98.16 E-value=1.2e-05 Score=80.96 Aligned_cols=125 Identities=19% Similarity=0.195 Sum_probs=77.7
Q ss_pred CCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhh
Q 012547 39 AEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (461)
Q Consensus 39 ~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~ 118 (461)
.....|||+|||+|.+|+++|..|+.. |++ .++.++++++++++.... -++.. .+.
T Consensus 5 ~~~~~~kV~ViGaG~vG~~~a~~l~~~-~~~---~el~l~D~~~~k~~g~a~-----DL~~~-------------~~~-- 60 (326)
T 3vku_A 5 TDKDHQKVILVGDGAVGSSYAYAMVLQ-GIA---QEIGIVDIFKDKTKGDAI-----DLEDA-------------LPF-- 60 (326)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHH-TCC---SEEEEECSCHHHHHHHHH-----HHHTT-------------GGG--
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHHhC-CCC---CeEEEEeCChHHHHHHHh-----hHhhh-------------hhh--
Confidence 344568999999999999999999988 732 389999998876553110 01110 000
Q ss_pred hhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch----------------hHHHHHHHHHH
Q 012547 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST----------------ETKEVFEEISR 182 (461)
Q Consensus 119 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~----------------~~~~vl~~i~~ 182 (461)
+ .++.++++..+++++||+||++.... .++++.+.+..
T Consensus 61 -------~-------------------~~~~i~~~~~~a~~~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~ 114 (326)
T 3vku_A 61 -------T-------------------SPKKIYSAEYSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVD 114 (326)
T ss_dssp -------S-------------------CCCEEEECCGGGGTTCSEEEECCCCC----------------CHHHHHHHHHT
T ss_pred -------c-------------------CCcEEEECcHHHhcCCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 0 13344445456799999999987321 24555566665
Q ss_pred HhhccCCCCEEEEEeecCccccccccccCCHHHHHHhHhCCCCCc
Q 012547 183 YWKERITVPVIISLAKGVEAELEAVPRIITPTQMINRATGVPIEN 227 (461)
Q Consensus 183 ~l~~~~~~~iIIs~tkGi~~~~~~~~~~~~~se~i~~~lg~~~~~ 227 (461)
+.. +..++.++|-+.. +..++++..+.|..+
T Consensus 115 ~~p----~a~ilvvtNPvdi----------~t~~~~k~~g~p~~r 145 (326)
T 3vku_A 115 SGF----NGIFLVAANPVDI----------LTYATWKLSGFPKNR 145 (326)
T ss_dssp TTC----CSEEEECSSSHHH----------HHHHHHHHHCCCGGG
T ss_pred cCC----ceEEEEccCchHH----------HHHHHHHhcCCCHHH
Confidence 543 5778878876543 235556655554444
No 130
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=98.15 E-value=5.7e-06 Score=77.46 Aligned_cols=103 Identities=14% Similarity=0.139 Sum_probs=68.7
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhccC
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (461)
|||.|+|+|.+|..+|..|.+. | ++|++++++++.++.+.. ..+ ..... ++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~-g-----~~v~vid~~~~~~~~l~~--------~~~---------~~~i~------gd 51 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSR-K-----YGVVIINKDRELCEEFAK--------KLK---------ATIIH------GD 51 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT-T-----CCEEEEESCHHHHHHHHH--------HSS---------SEEEE------SC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-C-----CeEEEEECCHHHHHHHHH--------HcC---------CeEEE------cC
Confidence 7999999999999999999998 8 999999999887654211 000 00000 01
Q ss_pred CccchhhhhhhcccccCCCCCCCCeEEecCHHHH-hcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecCcc
Q 012547 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEA-VWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (461)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~a-v~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~~ 202 (461)
..-...++++ +.+||+||++++++.....+..+...+.+ ...+|+.++.-..
T Consensus 52 ------------------------~~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~---~~~iia~~~~~~~ 104 (218)
T 3l4b_C 52 ------------------------GSHKEILRDAEVSKNDVVVILTPRDEVNLFIAQLVMKDFG---VKRVVSLVNDPGN 104 (218)
T ss_dssp ------------------------TTSHHHHHHHTCCTTCEEEECCSCHHHHHHHHHHHHHTSC---CCEEEECCCSGGG
T ss_pred ------------------------CCCHHHHHhcCcccCCEEEEecCCcHHHHHHHHHHHHHcC---CCeEEEEEeCcch
Confidence 0001123333 68899999999999887777776665443 4566766655443
No 131
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=98.13 E-value=2e-06 Score=86.17 Aligned_cols=95 Identities=23% Similarity=0.375 Sum_probs=69.8
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
-++|+|||.|.||.++|..+... | .+|..|+|+++..+. ..
T Consensus 139 g~tvGIiG~G~IG~~vA~~l~~~-G-----~~V~~~dr~~~~~~~--------------------------~~------- 179 (315)
T 3pp8_A 139 EFSVGIMGAGVLGAKVAESLQAW-G-----FPLRCWSRSRKSWPG--------------------------VE------- 179 (315)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTT-T-----CCEEEEESSCCCCTT--------------------------CE-------
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC-C-----CEEEEEcCCchhhhh--------------------------hh-------
Confidence 47999999999999999999877 7 899999998753211 00
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCC-chhHHHHH-HHHHHHhhccCCCCEEEEEeecC
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLP-STETKEVF-EEISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVp-s~~~~~vl-~~i~~~l~~~~~~~iIIs~tkGi 200 (461)
......++++++++||+|++++| ...++.++ ++....+++ ++++|.++.|=
T Consensus 180 ------------------------~~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~---gailIN~aRG~ 232 (315)
T 3pp8_A 180 ------------------------SYVGREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPD---GAYVLNLARGV 232 (315)
T ss_dssp ------------------------EEESHHHHHHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCT---TEEEEECSCGG
T ss_pred ------------------------hhcccCCHHHHHhhCCEEEEecCCchhhhhhccHHHHhhCCC---CCEEEECCCCh
Confidence 01112567888999999999999 44666655 445555676 68899888875
Q ss_pred ccc
Q 012547 201 EAE 203 (461)
Q Consensus 201 ~~~ 203 (461)
..+
T Consensus 233 ~vd 235 (315)
T 3pp8_A 233 HVQ 235 (315)
T ss_dssp GBC
T ss_pred hhh
Confidence 444
No 132
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.12 E-value=3e-06 Score=84.45 Aligned_cols=93 Identities=19% Similarity=0.308 Sum_probs=64.6
Q ss_pred CCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 41 ~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
.+.++|+|||+|.||.+++..|++..| ..+|.+|+|++++++.+.+ . +.
T Consensus 133 ~~~~~igiIG~G~~g~~~a~~l~~~~g----~~~V~v~dr~~~~~~~l~~--------~--------------~~----- 181 (312)
T 2i99_A 133 PSSEVLCILGAGVQAYSHYEIFTEQFS----FKEVRIWNRTKENAEKFAD--------T--------------VQ----- 181 (312)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHCC----CSEEEEECSSHHHHHHHHH--------H--------------SS-----
T ss_pred CCCcEEEEECCcHHHHHHHHHHHHhCC----CcEEEEEcCCHHHHHHHHH--------H--------------hh-----
Confidence 356899999999999999999986523 1489999999876553110 0 00
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEE
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISL 196 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~ 196 (461)
..+...++++++++++|+||+|||+. +.++.. +++++ +++|+++
T Consensus 182 -------------------------~~~~~~~~~~e~v~~aDiVi~atp~~--~~v~~~--~~l~~---g~~vi~~ 225 (312)
T 2i99_A 182 -------------------------GEVRVCSSVQEAVAGADVIITVTLAT--EPILFG--EWVKP---GAHINAV 225 (312)
T ss_dssp -------------------------SCCEECSSHHHHHTTCSEEEECCCCS--SCCBCG--GGSCT---TCEEEEC
T ss_pred -------------------------CCeEEeCCHHHHHhcCCEEEEEeCCC--CcccCH--HHcCC---CcEEEeC
Confidence 01445678889999999999999963 333322 45555 6766665
No 133
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.08 E-value=1.3e-05 Score=69.95 Aligned_cols=43 Identities=23% Similarity=0.190 Sum_probs=37.4
Q ss_pred CCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012547 39 AEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (461)
Q Consensus 39 ~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (461)
++....+|.|+|+|.+|..+|..|.+. | ++|++++++++.++.
T Consensus 3 ~~~~~~~viIiG~G~~G~~la~~L~~~-g-----~~v~vid~~~~~~~~ 45 (140)
T 3fwz_A 3 AVDICNHALLVGYGRVGSLLGEKLLAS-D-----IPLVVIETSRTRVDE 45 (140)
T ss_dssp CCCCCSCEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESCHHHHHH
T ss_pred cccCCCCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEECCHHHHHH
Confidence 344557899999999999999999998 8 999999999987664
No 134
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.07 E-value=9.2e-06 Score=70.48 Aligned_cols=39 Identities=13% Similarity=0.173 Sum_probs=35.2
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (461)
+++|.|+|+|.+|..+|..|.+. | ++|.+++++++.++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~-g-----~~V~~id~~~~~~~~ 44 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAA-G-----KKVLAVDKSKEKIEL 44 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-C-----CeEEEEECCHHHHHH
Confidence 46899999999999999999998 8 999999999876654
No 135
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=98.07 E-value=5.5e-06 Score=84.16 Aligned_cols=99 Identities=24% Similarity=0.288 Sum_probs=71.0
Q ss_pred CCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 41 ~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
-.-++|+|||.|.||.++|..+... | .+|..|+|++...+. ....
T Consensus 162 l~gktvGIIG~G~IG~~vA~~l~~~-G-----~~V~~~dr~~~~~~~--------------------------~~~~--- 206 (351)
T 3jtm_A 162 LEGKTIGTVGAGRIGKLLLQRLKPF-G-----CNLLYHDRLQMAPEL--------------------------EKET--- 206 (351)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGG-C-----CEEEEECSSCCCHHH--------------------------HHHH---
T ss_pred ccCCEEeEEEeCHHHHHHHHHHHHC-C-----CEEEEeCCCccCHHH--------------------------HHhC---
Confidence 3447999999999999999999877 8 899999988643221 0000
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCc-hhHHHHH-HHHHHHhhccCCCCEEEEEee
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-TETKEVF-EEISRYWKERITVPVIISLAK 198 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps-~~~~~vl-~~i~~~l~~~~~~~iIIs~tk 198 (461)
++....++++++++||+|++++|. ..++.++ ++....+++ ++++|.++.
T Consensus 207 --------------------------g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~---gailIN~aR 257 (351)
T 3jtm_A 207 --------------------------GAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKK---GVLIVNNAR 257 (351)
T ss_dssp --------------------------CCEECSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCT---TEEEEECSC
T ss_pred --------------------------CCeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCC---CCEEEECcC
Confidence 234446788999999999999995 3444444 344455666 788998887
Q ss_pred cCccc
Q 012547 199 GVEAE 203 (461)
Q Consensus 199 Gi~~~ 203 (461)
|=..+
T Consensus 258 G~~vd 262 (351)
T 3jtm_A 258 GAIME 262 (351)
T ss_dssp GGGBC
T ss_pred chhhC
Confidence 75443
No 136
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.06 E-value=1.1e-05 Score=67.04 Aligned_cols=40 Identities=23% Similarity=0.282 Sum_probs=34.5
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (461)
.+|+|+|+|+|.+|.+++..|.+. | .++|.+++|+++.++
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~-g----~~~v~~~~r~~~~~~ 43 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTS-S----NYSVTVADHDLAALA 43 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHC-S----SEEEEEEESCHHHHH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhC-C----CceEEEEeCCHHHHH
Confidence 347999999999999999999988 6 278999999987654
No 137
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.05 E-value=3.2e-06 Score=74.12 Aligned_cols=91 Identities=15% Similarity=0.213 Sum_probs=62.7
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
.+||+|||+|.||.+++..|+.. | ++|++|+|++++++.+.++ +. .
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~-g-----~~v~v~~r~~~~~~~~a~~----------------------~~-~----- 66 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYP-Q-----YKVTVAGRNIDHVRAFAEK----------------------YE-Y----- 66 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTT-T-----CEEEEEESCHHHHHHHHHH----------------------HT-C-----
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-----CEEEEEcCCHHHHHHHHHH----------------------hC-C-----
Confidence 46999999999999999999887 7 6799999998765532110 00 0
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEee
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tk 198 (461)
.+...+++.+++.++|+||.|+|+... ++. ...+++ +.+++.+..
T Consensus 67 ------------------------~~~~~~~~~~~~~~~Divi~at~~~~~--~~~--~~~l~~---g~~vid~~~ 111 (144)
T 3oj0_A 67 ------------------------EYVLINDIDSLIKNNDVIITATSSKTP--IVE--ERSLMP---GKLFIDLGN 111 (144)
T ss_dssp ------------------------EEEECSCHHHHHHTCSEEEECSCCSSC--SBC--GGGCCT---TCEEEECCS
T ss_pred ------------------------ceEeecCHHHHhcCCCEEEEeCCCCCc--Eee--HHHcCC---CCEEEEccC
Confidence 123456788888999999999997621 111 133454 566666543
No 138
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.05 E-value=1.8e-05 Score=79.66 Aligned_cols=99 Identities=18% Similarity=0.105 Sum_probs=68.7
Q ss_pred CCCCCCceEEEECccHHHHHHHHHHHHh-cCCCCCCeeEE-EEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccc
Q 012547 38 KAEGDPLRIVGVGAGAWGSVFTAMLQDS-YGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLK 115 (461)
Q Consensus 38 ~~~~~~mkI~IIGaGamG~alA~~La~~-~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~ 115 (461)
|...+++||+|||+|.||..++..+.+. .+ .++. +++++++.++.+.+ .
T Consensus 8 m~~~~~~rvgiiG~G~~g~~~~~~l~~~~~~-----~~lvav~d~~~~~~~~~~~--------~---------------- 58 (354)
T 3q2i_A 8 PITDRKIRFALVGCGRIANNHFGALEKHADR-----AELIDVCDIDPAALKAAVE--------R---------------- 58 (354)
T ss_dssp CCCSSCEEEEEECCSTTHHHHHHHHHHTTTT-----EEEEEEECSSHHHHHHHHH--------H----------------
T ss_pred cCCCCcceEEEEcCcHHHHHHHHHHHhCCCC-----eEEEEEEcCCHHHHHHHHH--------H----------------
Confidence 3444678999999999999999988865 13 6644 88998876543110 0
Q ss_pred hhhhhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhc--CCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEE
Q 012547 116 YVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVI 193 (461)
Q Consensus 116 ~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~--~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iI 193 (461)
+ ++...+|+++.+. +.|+|++|+|+....+++.... .. +..|
T Consensus 59 ----------~--------------------~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al---~~---gk~v 102 (354)
T 3q2i_A 59 ----------T--------------------GARGHASLTDMLAQTDADIVILTTPSGLHPTQSIECS---EA---GFHV 102 (354)
T ss_dssp ----------H--------------------CCEEESCHHHHHHHCCCSEEEECSCGGGHHHHHHHHH---HT---TCEE
T ss_pred ----------c--------------------CCceeCCHHHHhcCCCCCEEEECCCcHHHHHHHHHHH---HC---CCCE
Confidence 0 2456688888876 7999999999998877776654 33 3333
Q ss_pred EEEeecCcc
Q 012547 194 ISLAKGVEA 202 (461)
Q Consensus 194 Is~tkGi~~ 202 (461)
.+-|-+..
T Consensus 103 -~~EKP~a~ 110 (354)
T 3q2i_A 103 -MTEKPMAT 110 (354)
T ss_dssp -EECSSSCS
T ss_pred -EEeCCCcC
Confidence 46666544
No 139
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=98.03 E-value=8.1e-06 Score=82.80 Aligned_cols=87 Identities=17% Similarity=0.258 Sum_probs=58.8
Q ss_pred CCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhh
Q 012547 39 AEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (461)
Q Consensus 39 ~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~ 118 (461)
.++++|||.|+|||.+|..+|..|++. ++|++++++.+.++.++ . ....+
T Consensus 12 ~~g~~mkilvlGaG~vG~~~~~~L~~~-------~~v~~~~~~~~~~~~~~---------~-------------~~~~~- 61 (365)
T 3abi_A 12 IEGRHMKVLILGAGNIGRAIAWDLKDE-------FDVYIGDVNNENLEKVK---------E-------------FATPL- 61 (365)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHTTT-------SEEEEEESCHHHHHHHT---------T-------------TSEEE-
T ss_pred ccCCccEEEEECCCHHHHHHHHHHhcC-------CCeEEEEcCHHHHHHHh---------c-------------cCCcE-
Confidence 456789999999999999999999866 79999999987655321 0 11110
Q ss_pred hhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHH
Q 012547 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEIS 181 (461)
Q Consensus 119 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~ 181 (461)
.+ .+.-..++.++++++|+||.|+|+.+...+++...
T Consensus 62 ------~~--------------------d~~d~~~l~~~~~~~DvVi~~~p~~~~~~v~~~~~ 98 (365)
T 3abi_A 62 ------KV--------------------DASNFDKLVEVMKEFELVIGALPGFLGFKSIKAAI 98 (365)
T ss_dssp ------EC--------------------CTTCHHHHHHHHTTCSEEEECCCGGGHHHHHHHHH
T ss_pred ------EE--------------------ecCCHHHHHHHHhCCCEEEEecCCcccchHHHHHH
Confidence 00 11112345667899999999999987777665543
No 140
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=98.02 E-value=3.6e-06 Score=89.97 Aligned_cols=97 Identities=21% Similarity=0.234 Sum_probs=72.8
Q ss_pred CCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 41 ~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
-..++|+|||.|.||.++|..|... | .+|..|+++... +.. .. +
T Consensus 140 l~g~~vgIIG~G~IG~~vA~~l~~~-G-----~~V~~~d~~~~~-~~a---------~~--------------~------ 183 (529)
T 1ygy_A 140 IFGKTVGVVGLGRIGQLVAQRIAAF-G-----AYVVAYDPYVSP-ARA---------AQ--------------L------ 183 (529)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEECTTSCH-HHH---------HH--------------H------
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhC-C-----CEEEEECCCCCh-hHH---------Hh--------------c------
Confidence 3448999999999999999999987 7 899999987631 110 00 0
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch-hHHHHHHH-HHHHhhccCCCCEEEEEee
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVFEE-ISRYWKERITVPVIISLAK 198 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~-~~~~vl~~-i~~~l~~~~~~~iIIs~tk 198 (461)
++... ++++++++||+|++++|.. .++.++.+ +.+.+++ ++++|.+++
T Consensus 184 --------------------------g~~~~-~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~---g~ilin~ar 233 (529)
T 1ygy_A 184 --------------------------GIELL-SLDDLLARADFISVHLPKTPETAGLIDKEALAKTKP---GVIIVNAAR 233 (529)
T ss_dssp --------------------------TCEEC-CHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCT---TEEEEECSC
T ss_pred --------------------------CcEEc-CHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCC---CCEEEECCC
Confidence 12222 6888899999999999987 77777755 6666776 788999998
Q ss_pred cCccc
Q 012547 199 GVEAE 203 (461)
Q Consensus 199 Gi~~~ 203 (461)
|-..+
T Consensus 234 g~iv~ 238 (529)
T 1ygy_A 234 GGLVD 238 (529)
T ss_dssp TTSBC
T ss_pred Cchhh
Confidence 85544
No 141
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=98.01 E-value=1.8e-05 Score=79.75 Aligned_cols=125 Identities=11% Similarity=0.105 Sum_probs=79.3
Q ss_pred CCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhh
Q 012547 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (461)
Q Consensus 40 ~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (461)
..+.+||+|||+|.||+++|..|+.. |+. .+|.++|+++++++.... + ++.. ..+ +
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~-~~~---~el~L~Di~~~~~~g~a~----D-L~~~----------~~~-~---- 71 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMK-DLA---DELALVDVIEDKLKGEMM----D-LQHG----------SLF-L---- 71 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHT-TCC---SEEEEECSCHHHHHHHHH----H-HHHT----------GGG-C----
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhC-CCC---ceEEEEeCChHHHHHHHH----h-hhhh----------hhc-c----
Confidence 34568999999999999999999988 721 389999998776553111 0 1110 001 0
Q ss_pred hccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCC--c--------------hhHHHHHHHHHHH
Q 012547 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLP--S--------------TETKEVFEEISRY 183 (461)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVp--s--------------~~~~~vl~~i~~~ 183 (461)
. ...+..++|++ ++++||+||++.- . ..++++.+.+..+
T Consensus 72 ---~---------------------~~~i~~~~d~~-~~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~ 126 (331)
T 4aj2_A 72 ---K---------------------TPKIVSSKDYS-VTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKY 126 (331)
T ss_dssp ---S---------------------CCEEEECSSGG-GGTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred ---C---------------------CCeEEEcCCHH-HhCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 01345567876 5899999999862 2 1356666677766
Q ss_pred hhccCCCCEEEEEeecCccccccccccCCHHHHHHhHhCCCCCc
Q 012547 184 WKERITVPVIISLAKGVEAELEAVPRIITPTQMINRATGVPIEN 227 (461)
Q Consensus 184 l~~~~~~~iIIs~tkGi~~~~~~~~~~~~~se~i~~~lg~~~~~ 227 (461)
. + +..++.++|-+..- ..++.+..+.|..+
T Consensus 127 ~-p---~a~vlvvtNPvdi~----------t~~~~k~sg~p~~r 156 (331)
T 4aj2_A 127 S-P---QCKLLIVSNPVDIL----------TYVAWKISGFPKNR 156 (331)
T ss_dssp C-T---TCEEEECSSSHHHH----------HHHHHHHHCCCGGG
T ss_pred C-C---CeEEEEecChHHHH----------HHHHHHHhCCCHHH
Confidence 3 3 57888888765432 35556655554444
No 142
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=97.99 E-value=2.6e-05 Score=77.68 Aligned_cols=39 Identities=18% Similarity=0.135 Sum_probs=33.6
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (461)
|||+|||+|++|++++..|+.. +.+ .++.++|+++++++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~-~~~---~el~L~Di~~~k~~ 39 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALL-GVA---REVVLVDLDRKLAQ 39 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCC---SEEEEECSSHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCC---CEEEEEeCChhHHH
Confidence 7999999999999999999987 532 58999999976655
No 143
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=97.98 E-value=5.9e-06 Score=83.01 Aligned_cols=95 Identities=21% Similarity=0.363 Sum_probs=68.9
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
-++|+|||.|.||.++|..+... | .+|..|+|+.+..+. +.
T Consensus 137 gktvGIiGlG~IG~~vA~~l~~~-G-----~~V~~~dr~~~~~~~--------------------------~~------- 177 (324)
T 3evt_A 137 GQQLLIYGTGQIGQSLAAKASAL-G-----MHVIGVNTTGHPADH--------------------------FH------- 177 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESSCCCCTT--------------------------CS-------
T ss_pred CCeEEEECcCHHHHHHHHHHHhC-C-----CEEEEECCCcchhHh--------------------------Hh-------
Confidence 47999999999999999999877 8 899999998643211 00
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCc-hhHHHHH-HHHHHHhhccCCCCEEEEEeecC
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-TETKEVF-EEISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps-~~~~~vl-~~i~~~l~~~~~~~iIIs~tkGi 200 (461)
......++++++++||+|++++|. ..++.++ ++....+++ ++++|.++.|=
T Consensus 178 ------------------------~~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~---gailIN~aRG~ 230 (324)
T 3evt_A 178 ------------------------ETVAFTATADALATANFIVNALPLTPTTHHLFSTELFQQTKQ---QPMLINIGRGP 230 (324)
T ss_dssp ------------------------EEEEGGGCHHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCS---CCEEEECSCGG
T ss_pred ------------------------hccccCCHHHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCC---CCEEEEcCCCh
Confidence 112235677888999999999994 4555544 344455666 78999888775
Q ss_pred ccc
Q 012547 201 EAE 203 (461)
Q Consensus 201 ~~~ 203 (461)
..+
T Consensus 231 ~vd 233 (324)
T 3evt_A 231 AVD 233 (324)
T ss_dssp GBC
T ss_pred hhh
Confidence 443
No 144
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=97.97 E-value=6.9e-06 Score=82.26 Aligned_cols=93 Identities=18% Similarity=0.202 Sum_probs=67.8
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEec-CchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRR-PGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r-~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
..++|+|||.|.||.++|..+... | .+|..|+| +.+.... ...
T Consensus 145 ~g~~vgIIG~G~IG~~~A~~l~~~-G-----~~V~~~d~~~~~~~~~---------------------------~~~--- 188 (320)
T 1gdh_A 145 DNKTLGIYGFGSIGQALAKRAQGF-D-----MDIDYFDTHRASSSDE---------------------------ASY--- 188 (320)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEECSSCCCHHHH---------------------------HHH---
T ss_pred CCCEEEEECcCHHHHHHHHHHHHC-C-----CEEEEECCCCcChhhh---------------------------hhc---
Confidence 347999999999999999999877 7 89999999 7643110 000
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch-hHHHHH-HHHHHHhhccCCCCEEEEEee
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAK 198 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~-~~~~vl-~~i~~~l~~~~~~~iIIs~tk 198 (461)
++...+++++++++||+|++++|.. .++.++ +...+.+++ ++++|.++.
T Consensus 189 --------------------------g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~---gailIn~ar 239 (320)
T 1gdh_A 189 --------------------------QATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQ---GAIVVNTAR 239 (320)
T ss_dssp --------------------------TCEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCT---TEEEEECSC
T ss_pred --------------------------CcEEcCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCC---CcEEEECCC
Confidence 1233447888889999999999964 455555 334456666 688888887
Q ss_pred c
Q 012547 199 G 199 (461)
Q Consensus 199 G 199 (461)
|
T Consensus 240 g 240 (320)
T 1gdh_A 240 G 240 (320)
T ss_dssp G
T ss_pred C
Confidence 6
No 145
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=97.97 E-value=9e-06 Score=82.42 Aligned_cols=98 Identities=13% Similarity=0.108 Sum_probs=70.1
Q ss_pred CCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhh
Q 012547 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (461)
Q Consensus 40 ~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (461)
+-..++|+|||.|.||.++|..+... | .+|..|+++.+.... . ..
T Consensus 165 ~l~g~tvGIIG~G~IG~~vA~~l~~~-G-----~~V~~~d~~~~~~~~-----------~-------------~~----- 209 (347)
T 1mx3_A 165 RIRGETLGIIGLGRVGQAVALRAKAF-G-----FNVLFYDPYLSDGVE-----------R-------------AL----- 209 (347)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEECTTSCTTHH-----------H-------------HH-----
T ss_pred CCCCCEEEEEeECHHHHHHHHHHHHC-C-----CEEEEECCCcchhhH-----------h-------------hc-----
Confidence 44558999999999999999999877 7 899999987642100 0 00
Q ss_pred hccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch-hHHHHH-HHHHHHhhccCCCCEEEEEe
Q 012547 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLA 197 (461)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~-~~~~vl-~~i~~~l~~~~~~~iIIs~t 197 (461)
++....+++++++.||+|++++|.. .++.++ ++..+.+++ ++++|.++
T Consensus 210 ---------------------------g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~---gailIN~a 259 (347)
T 1mx3_A 210 ---------------------------GLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQ---GAFLVNTA 259 (347)
T ss_dssp ---------------------------TCEECSSHHHHHHHCSEEEECCCCCTTCTTSBSHHHHTTSCT---TEEEEECS
T ss_pred ---------------------------CCeecCCHHHHHhcCCEEEEcCCCCHHHHHHhHHHHHhcCCC---CCEEEECC
Confidence 1233457888889999999999964 555555 444455666 68888888
Q ss_pred ecCcc
Q 012547 198 KGVEA 202 (461)
Q Consensus 198 kGi~~ 202 (461)
.|=..
T Consensus 260 rg~~v 264 (347)
T 1mx3_A 260 RGGLV 264 (347)
T ss_dssp CTTSB
T ss_pred CChHH
Confidence 77433
No 146
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=97.95 E-value=8e-06 Score=81.55 Aligned_cols=92 Identities=14% Similarity=0.170 Sum_probs=66.4
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
..++|+|||.|.||.++|..+... | .+|..|+|+.+.... ..
T Consensus 141 ~g~~vgIIG~G~IG~~~A~~l~~~-G-----~~V~~~d~~~~~~~~---------------------------~~----- 182 (313)
T 2ekl_A 141 AGKTIGIVGFGRIGTKVGIIANAM-G-----MKVLAYDILDIREKA---------------------------EK----- 182 (313)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHT-T-----CEEEEECSSCCHHHH---------------------------HH-----
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHC-C-----CEEEEECCCcchhHH---------------------------Hh-----
Confidence 347999999999999999999887 8 899999998753210 00
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchh-HHHHH-HHHHHHhhccCCCCEEEEEeec
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-TKEVF-EEISRYWKERITVPVIISLAKG 199 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~-~~~vl-~~i~~~l~~~~~~~iIIs~tkG 199 (461)
+ ++.. .++++++++||+|++++|... ++.++ +...+.+++ ++++|.++.|
T Consensus 183 ----~--------------------g~~~-~~l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~---ga~lIn~arg 234 (313)
T 2ekl_A 183 ----I--------------------NAKA-VSLEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKD---NVIIVNTSRA 234 (313)
T ss_dssp ----T--------------------TCEE-CCHHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCT---TEEEEESSCG
T ss_pred ----c--------------------Ccee-cCHHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCC---CCEEEECCCC
Confidence 0 1222 367888899999999999543 44444 334455666 6788888776
No 147
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=97.95 E-value=2.7e-05 Score=68.60 Aligned_cols=75 Identities=20% Similarity=0.236 Sum_probs=55.7
Q ss_pred CCceEEEECc----cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchh
Q 012547 42 DPLRIVGVGA----GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYV 117 (461)
Q Consensus 42 ~~mkI~IIGa----GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~ 117 (461)
++.+|+|||+ |.||..++..|.+. | ++|+-++++.+. ..
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~-G-----~~V~~vnp~~~~-----------------------------i~-- 55 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLSK-G-----FEVLPVNPNYDE-----------------------------IE-- 55 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHHT-T-----CEEEEECTTCSE-----------------------------ET--
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHHC-C-----CEEEEeCCCCCe-----------------------------EC--
Confidence 4578999999 99999999999988 8 765554443211 00
Q ss_pred hhhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHH
Q 012547 118 EARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISR 182 (461)
Q Consensus 118 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~ 182 (461)
++.+..+++++...+|++++++|+..+.++++++..
T Consensus 56 -----------------------------G~~~~~s~~el~~~vDlvii~vp~~~v~~v~~~~~~ 91 (138)
T 1y81_A 56 -----------------------------GLKCYRSVRELPKDVDVIVFVVPPKVGLQVAKEAVE 91 (138)
T ss_dssp -----------------------------TEECBSSGGGSCTTCCEEEECSCHHHHHHHHHHHHH
T ss_pred -----------------------------CeeecCCHHHhCCCCCEEEEEeCHHHHHHHHHHHHH
Confidence 233445566666679999999999999999988765
No 148
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=97.95 E-value=5.6e-05 Score=74.91 Aligned_cols=122 Identities=12% Similarity=0.089 Sum_probs=77.0
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhccC
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (461)
|||+|||+|.+|+++|..|+.+ +.. .++.|+|.+++.++-.. .+ +.... .+++.
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~-~~~---~el~L~Di~~~~~~G~a----~D-L~h~~----------~~~~~------- 54 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLN-LDV---DEIALVDIAEDLAVGEA----MD-LAHAA----------AGIDK------- 54 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-SCC---SEEEEECSSHHHHHHHH----HH-HHHHH----------GGGTC-------
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCC---CEEEEEeCCCCcchhhh----hh-hhccc----------ccCCC-------
Confidence 8999999999999999999988 643 48999999876544210 01 11100 01110
Q ss_pred CccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcC--Cch--------------hHHHHHHHHHHHhhcc
Q 012547 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL--PST--------------ETKEVFEEISRYWKER 187 (461)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaV--ps~--------------~~~~vl~~i~~~l~~~ 187 (461)
...+..++|.+ ++++||+||++- |.. .++++.+++.++..
T Consensus 55 ---------------------~~~i~~~~d~~-~~~~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p-- 110 (294)
T 2x0j_A 55 ---------------------YPKIVGGADYS-LLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAP-- 110 (294)
T ss_dssp ---------------------CCEEEEESCGG-GGTTCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTST--
T ss_pred ---------------------CCeEecCCCHH-HhCCCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCC--
Confidence 01345567775 589999999976 221 34555566665543
Q ss_pred CCCCEEEEEeecCccccccccccCCHHHHHHhHhCCCCCc
Q 012547 188 ITVPVIISLAKGVEAELEAVPRIITPTQMINRATGVPIEN 227 (461)
Q Consensus 188 ~~~~iIIs~tkGi~~~~~~~~~~~~~se~i~~~lg~~~~~ 227 (461)
+.+++.++|-++.- ..+.++..|.|..+
T Consensus 111 --~aivlvvsNPvd~~----------t~i~~k~sg~p~~r 138 (294)
T 2x0j_A 111 --ESKILVVTNPMDVM----------TYIMWKESGKPRNE 138 (294)
T ss_dssp --TCEEEECSSSHHHH----------HHHHHHHSSCCTTS
T ss_pred --ceEEEEecCcchhh----------HHhhHHHcCCChhh
Confidence 57888888876542 24556666655444
No 149
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=97.94 E-value=1e-05 Score=83.38 Aligned_cols=98 Identities=20% Similarity=0.174 Sum_probs=70.0
Q ss_pred CCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 41 ~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
-.-++|+|||.|.||.++|..+... | .+|..|+|+....+. ...
T Consensus 189 l~gktvGIIGlG~IG~~vA~~l~a~-G-----~~V~~~d~~~~~~~~--------------------------~~~---- 232 (393)
T 2nac_A 189 LEAMHVGTVAAGRIGLAVLRRLAPF-D-----VHLHYTDRHRLPESV--------------------------EKE---- 232 (393)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHGGG-T-----CEEEEECSSCCCHHH--------------------------HHH----
T ss_pred CCCCEEEEEeECHHHHHHHHHHHhC-C-----CEEEEEcCCccchhh--------------------------Hhh----
Confidence 3457999999999999999999877 7 899999988643221 000
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch-hHHHHH-HHHHHHhhccCCCCEEEEEee
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAK 198 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~-~~~~vl-~~i~~~l~~~~~~~iIIs~tk 198 (461)
+ ++....+++++++.||+|++++|.. .++.++ ++....+++ ++++|.++.
T Consensus 233 -----~--------------------G~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~---gailIN~aR 284 (393)
T 2nac_A 233 -----L--------------------NLTWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKR---GAYIVNTAR 284 (393)
T ss_dssp -----H--------------------TCEECSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCT---TEEEEECSC
T ss_pred -----c--------------------CceecCCHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCC---CCEEEECCC
Confidence 0 2233357888899999999999953 555555 344455666 688898887
Q ss_pred cCcc
Q 012547 199 GVEA 202 (461)
Q Consensus 199 Gi~~ 202 (461)
|=..
T Consensus 285 G~~v 288 (393)
T 2nac_A 285 GKLC 288 (393)
T ss_dssp GGGB
T ss_pred chHh
Confidence 7433
No 150
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=97.94 E-value=1.3e-05 Score=81.22 Aligned_cols=95 Identities=19% Similarity=0.179 Sum_probs=69.1
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
-++|+|||.|.||.++|..+..- | .+|..|+|+....+. ..
T Consensus 173 gktvGIIGlG~IG~~vA~~l~~~-G-----~~V~~~dr~~~~~~~--------------------------~~------- 213 (345)
T 4g2n_A 173 GRRLGIFGMGRIGRAIATRARGF-G-----LAIHYHNRTRLSHAL--------------------------EE------- 213 (345)
T ss_dssp TCEEEEESCSHHHHHHHHHHHTT-T-----CEEEEECSSCCCHHH--------------------------HT-------
T ss_pred CCEEEEEEeChhHHHHHHHHHHC-C-----CEEEEECCCCcchhh--------------------------hc-------
Confidence 37999999999999999999876 7 899999998632211 00
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCc-hhHHHHH-HHHHHHhhccCCCCEEEEEeecC
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-TETKEVF-EEISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps-~~~~~vl-~~i~~~l~~~~~~~iIIs~tkGi 200 (461)
......++++++++||+|++++|. ..++.++ ++....+++ ++++|.++.|=
T Consensus 214 ------------------------g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~---gailIN~aRG~ 266 (345)
T 4g2n_A 214 ------------------------GAIYHDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPE---GAVVINISRGD 266 (345)
T ss_dssp ------------------------TCEECSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCT---TEEEEECSCGG
T ss_pred ------------------------CCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCC---CcEEEECCCCc
Confidence 123346788999999999999994 4444444 344455666 68899888775
Q ss_pred ccc
Q 012547 201 EAE 203 (461)
Q Consensus 201 ~~~ 203 (461)
..+
T Consensus 267 ~vd 269 (345)
T 4g2n_A 267 LIN 269 (345)
T ss_dssp GBC
T ss_pred hhC
Confidence 444
No 151
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=97.92 E-value=4.3e-05 Score=72.65 Aligned_cols=81 Identities=23% Similarity=0.358 Sum_probs=59.4
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeE-EEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
|||+|||+|.||..++..|.+. | ++| .+|++++. .+
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~-g-----~~lv~v~d~~~~-~~------------------------------------ 37 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERN-G-----FEIAAILDVRGE-HE------------------------------------ 37 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEECSSCC-CT------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHhcC-C-----CEEEEEEecCcc-hh------------------------------------
Confidence 6999999999999999999876 6 776 68887741 10
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHh-cCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeec
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAV-WDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av-~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkG 199 (461)
. ..+|+++.+ .++|+||+|+|++...+++... +.. +..+++...+
T Consensus 38 ------------------------~--~~~~~~~l~~~~~DvVv~~~~~~~~~~~~~~~---l~~---G~~vv~~~~~ 83 (236)
T 2dc1_A 38 ------------------------K--MVRGIDEFLQREMDVAVEAASQQAVKDYAEKI---LKA---GIDLIVLSTG 83 (236)
T ss_dssp ------------------------T--EESSHHHHTTSCCSEEEECSCHHHHHHHHHHH---HHT---TCEEEESCGG
T ss_pred ------------------------h--hcCCHHHHhcCCCCEEEECCCHHHHHHHHHHH---HHC---CCcEEEECcc
Confidence 1 235667766 6899999999998877776543 344 5666655443
No 152
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=97.92 E-value=1.2e-05 Score=71.28 Aligned_cols=84 Identities=17% Similarity=0.010 Sum_probs=58.3
Q ss_pred HHHHhhcCCCCCCceEEEECc----cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHh
Q 012547 31 ELRRLMGKAEGDPLRIVGVGA----GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRR 106 (461)
Q Consensus 31 ~~~~~~~~~~~~~mkI~IIGa----GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~ 106 (461)
++++++.. +.+|+|||+ |.||..++..|.+. | ++|+.++++.. -+.
T Consensus 5 ~l~~ll~~----p~~IavIGas~~~g~~G~~~~~~L~~~-G-----~~v~~vnp~~~-g~~------------------- 54 (145)
T 2duw_A 5 DIAGILTS----TRTIALVGASDKPDRPSYRVMKYLLDQ-G-----YHVIPVSPKVA-GKT------------------- 54 (145)
T ss_dssp SHHHHHHH----CCCEEEESCCSCTTSHHHHHHHHHHHH-T-----CCEEEECSSST-TSE-------------------
T ss_pred HHHHHHhC----CCEEEEECcCCCCCChHHHHHHHHHHC-C-----CEEEEeCCccc-ccc-------------------
Confidence 35566622 457999999 89999999999998 8 66555544320 000
Q ss_pred hhhcccccchhhhhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHH
Q 012547 107 LIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISR 182 (461)
Q Consensus 107 ~~~n~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~ 182 (461)
.. ++.+..+++++...+|++++++|+..+.++++++..
T Consensus 55 -------i~-------------------------------G~~~~~sl~el~~~~Dlvii~vp~~~v~~v~~~~~~ 92 (145)
T 2duw_A 55 -------LL-------------------------------GQQGYATLADVPEKVDMVDVFRNSEAAWGVAQEAIA 92 (145)
T ss_dssp -------ET-------------------------------TEECCSSTTTCSSCCSEEECCSCSTHHHHHHHHHHH
T ss_pred -------cC-------------------------------CeeccCCHHHcCCCCCEEEEEeCHHHHHHHHHHHHH
Confidence 00 223334455555678999999999999999988776
No 153
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.92 E-value=4e-05 Score=76.66 Aligned_cols=95 Identities=19% Similarity=0.164 Sum_probs=66.6
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEE-EEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
+++||+|||+|.||..++..|.+. . +.+|. +++++++.++.+.+
T Consensus 3 ~~~rvgiiG~G~~g~~~~~~l~~~-~----~~~l~av~d~~~~~~~~~a~------------------------------ 47 (344)
T 3euw_A 3 LTLRIALFGAGRIGHVHAANIAAN-P----DLELVVIADPFIEGAQRLAE------------------------------ 47 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHC-T----TEEEEEEECSSHHHHHHHHH------------------------------
T ss_pred CceEEEEECCcHHHHHHHHHHHhC-C----CcEEEEEECCCHHHHHHHHH------------------------------
Confidence 358999999999999999998875 2 26655 78888765543110
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhc--CCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEee
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~--~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tk 198 (461)
.+ +....+|+++++. ++|+|++|+|+....+++..... . +.. |.+-|
T Consensus 48 ----~~--------------------g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~---~---gk~-v~~EK 96 (344)
T 3euw_A 48 ----AN--------------------GAEAVASPDEVFARDDIDGIVIGSPTSTHVDLITRAVE---R---GIP-ALCEK 96 (344)
T ss_dssp ----TT--------------------TCEEESSHHHHTTCSCCCEEEECSCGGGHHHHHHHHHH---T---TCC-EEECS
T ss_pred ----Hc--------------------CCceeCCHHHHhcCCCCCEEEEeCCchhhHHHHHHHHH---c---CCc-EEEEC
Confidence 00 2355688888887 78999999999988887766543 3 333 33666
Q ss_pred cCcc
Q 012547 199 GVEA 202 (461)
Q Consensus 199 Gi~~ 202 (461)
.+..
T Consensus 97 P~~~ 100 (344)
T 3euw_A 97 PIDL 100 (344)
T ss_dssp CSCS
T ss_pred CCCC
Confidence 6544
No 154
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=97.92 E-value=1e-05 Score=82.44 Aligned_cols=98 Identities=22% Similarity=0.228 Sum_probs=69.8
Q ss_pred CCCCceEEEECccHHHHHHHHHHHHhcCCCCCCee-EEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhh
Q 012547 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (461)
Q Consensus 40 ~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~-V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~ 118 (461)
+...++|+|||.|.||.++|..+... | .+ |..|+|+....+. ...
T Consensus 161 ~l~g~tvgIIG~G~IG~~vA~~l~~~-G-----~~~V~~~d~~~~~~~~--------------------------~~~-- 206 (364)
T 2j6i_A 161 DIEGKTIATIGAGRIGYRVLERLVPF-N-----PKELLYYDYQALPKDA--------------------------EEK-- 206 (364)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGG-C-----CSEEEEECSSCCCHHH--------------------------HHH--
T ss_pred cCCCCEEEEECcCHHHHHHHHHHHhC-C-----CcEEEEECCCccchhH--------------------------HHh--
Confidence 33457999999999999999999877 7 76 9999988643221 000
Q ss_pred hhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch-hHHHHH-HHHHHHhhccCCCCEEEEE
Q 012547 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISL 196 (461)
Q Consensus 119 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~-~~~~vl-~~i~~~l~~~~~~~iIIs~ 196 (461)
.++....++++++++||+|++++|.. .++.++ ++..+.+++ ++++|.+
T Consensus 207 ---------------------------~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~---ga~lIn~ 256 (364)
T 2j6i_A 207 ---------------------------VGARRVENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKK---GAWLVNT 256 (364)
T ss_dssp ---------------------------TTEEECSSHHHHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCT---TEEEEEC
T ss_pred ---------------------------cCcEecCCHHHHHhcCCEEEECCCCChHHHHHhCHHHHhhCCC---CCEEEEC
Confidence 02333457888899999999999975 455544 334455666 6788888
Q ss_pred eecCc
Q 012547 197 AKGVE 201 (461)
Q Consensus 197 tkGi~ 201 (461)
..|=.
T Consensus 257 arG~~ 261 (364)
T 2j6i_A 257 ARGAI 261 (364)
T ss_dssp SCGGG
T ss_pred CCCch
Confidence 87733
No 155
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=97.92 E-value=8.2e-05 Score=75.27 Aligned_cols=122 Identities=15% Similarity=0.178 Sum_probs=77.5
Q ss_pred CceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 43 ~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
.|||+|||+ |.+|+++|..++.. |.. .+|.++|+++++++.... + ++.. .+ +
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~-g~~---~evvLiDi~~~k~~g~a~----D-L~~~-----------~~-~------ 60 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMM-RLT---PNLCLYDPFAVGLEGVAE----E-IRHC-----------GF-E------ 60 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHT-TCC---SCEEEECSCHHHHHHHHH----H-HHHH-----------CC-T------
T ss_pred CCEEEEECCCChHHHHHHHHHHhc-CCC---CEEEEEeCCchhHHHHHH----h-hhhC-----------cC-C------
Confidence 479999998 99999999999987 731 489999998765542110 0 1100 01 1
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcC--Cc--------------hhHHHHHHHHHHHhh
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL--PS--------------TETKEVFEEISRYWK 185 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaV--ps--------------~~~~~vl~~i~~~l~ 185 (461)
..++.+++|..+++++||+||++. |. ..++++.+.+..+..
T Consensus 61 -----------------------~~~i~~t~d~~~al~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p 117 (343)
T 3fi9_A 61 -----------------------GLNLTFTSDIKEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCP 117 (343)
T ss_dssp -----------------------TCCCEEESCHHHHHTTEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred -----------------------CCceEEcCCHHHHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 014677889988899999999986 22 124455555555543
Q ss_pred ccCCCCE-EEEEeecCccccccccccCCHHHHHHhHhCCCCCcE
Q 012547 186 ERITVPV-IISLAKGVEAELEAVPRIITPTQMINRATGVPIENI 228 (461)
Q Consensus 186 ~~~~~~i-IIs~tkGi~~~~~~~~~~~~~se~i~~~lg~~~~~v 228 (461)
+.+ ++.++|-+..- ..++.+..|.|..++
T Consensus 118 ----~a~~vlvvsNPvd~~----------t~i~~k~sg~p~~rv 147 (343)
T 3fi9_A 118 ----DCKHVIIIFNPADIT----------GLVTLIYSGLKPSQV 147 (343)
T ss_dssp ----TCCEEEECSSSHHHH----------HHHHHHHHTCCGGGE
T ss_pred ----CcEEEEEecCchHHH----------HHHHHHHcCCCcceE
Confidence 453 67777765432 244555556554554
No 156
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.90 E-value=2e-05 Score=67.64 Aligned_cols=38 Identities=16% Similarity=0.208 Sum_probs=33.4
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (461)
+++|.|+|+|.+|..++..|.+. | ++|++++++++.++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~-g-----~~v~~~d~~~~~~~ 43 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRM-G-----HEVLAVDINEEKVN 43 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-T-----CCCEEEESCHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHH
Confidence 35799999999999999999998 8 89999999876554
No 157
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=97.90 E-value=8.3e-06 Score=81.14 Aligned_cols=90 Identities=18% Similarity=0.295 Sum_probs=67.2
Q ss_pred CCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 41 ~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
...++|+|||.|.||.++|..+... | .+|..|+|+.+ +. +
T Consensus 122 l~g~~vgIIG~G~IG~~~A~~l~~~-G-----~~V~~~dr~~~--~~----------------------------~---- 161 (303)
T 1qp8_A 122 IQGEKVAVLGLGEIGTRVGKILAAL-G-----AQVRGFSRTPK--EG----------------------------P---- 161 (303)
T ss_dssp CTTCEEEEESCSTHHHHHHHHHHHT-T-----CEEEEECSSCC--CS----------------------------S----
T ss_pred CCCCEEEEEccCHHHHHHHHHHHHC-C-----CEEEEECCCcc--cc----------------------------C----
Confidence 3458999999999999999999887 7 89999998763 10 0
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch-hHHHHHH-HHHHHhhccCCCCEEEEEee
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVFE-EISRYWKERITVPVIISLAK 198 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~-~~~~vl~-~i~~~l~~~~~~~iIIs~tk 198 (461)
.....+++++++.||+|++++|.. .++.++. +..+.+++ ++++|.++.
T Consensus 162 ---------------------------~~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~---gailin~sr 211 (303)
T 1qp8_A 162 ---------------------------WRFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLALMAE---DAVFVNVGR 211 (303)
T ss_dssp ---------------------------SCCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTSCT---TCEEEECSC
T ss_pred ---------------------------cccCCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHHhhCCC---CCEEEECCC
Confidence 001235677889999999999975 5666653 45566676 788888887
Q ss_pred cC
Q 012547 199 GV 200 (461)
Q Consensus 199 Gi 200 (461)
|=
T Consensus 212 g~ 213 (303)
T 1qp8_A 212 AE 213 (303)
T ss_dssp GG
T ss_pred Cc
Confidence 63
No 158
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=97.89 E-value=1.6e-05 Score=79.10 Aligned_cols=92 Identities=21% Similarity=0.291 Sum_probs=66.6
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
..++|+|||.|.||..+|..+... | .+|..|+|+.+. +. ...
T Consensus 141 ~g~~vgIiG~G~IG~~~A~~l~~~-G-----~~V~~~d~~~~~-~~--------------------------~~~----- 182 (307)
T 1wwk_A 141 EGKTIGIIGFGRIGYQVAKIANAL-G-----MNILLYDPYPNE-ER--------------------------AKE----- 182 (307)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCH-HH--------------------------HHH-----
T ss_pred CCceEEEEccCHHHHHHHHHHHHC-C-----CEEEEECCCCCh-hh--------------------------Hhh-----
Confidence 347999999999999999999887 8 899999998753 11 000
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch-hHHHHH-HHHHHHhhccCCCCEEEEEeec
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKG 199 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~-~~~~vl-~~i~~~l~~~~~~~iIIs~tkG 199 (461)
+ ++.. .++++++++||+|++++|.. .++.++ ++..+.+++ ++++|.++.|
T Consensus 183 ----~--------------------g~~~-~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~---ga~lin~arg 234 (307)
T 1wwk_A 183 ----V--------------------NGKF-VDLETLLKESDVVTIHVPLVESTYHLINEERLKLMKK---TAILINTSRG 234 (307)
T ss_dssp ----T--------------------TCEE-CCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCT---TCEEEECSCG
T ss_pred ----c--------------------Cccc-cCHHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCC---CeEEEECCCC
Confidence 0 1222 36788889999999999964 344444 344455666 6888888776
No 159
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=97.89 E-value=1.1e-05 Score=82.00 Aligned_cols=96 Identities=15% Similarity=0.188 Sum_probs=69.1
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
-++|+|||.|.||.++|..+... | .+|..|+|+... +. ...
T Consensus 160 g~tvGIIGlG~IG~~vA~~l~~~-G-----~~V~~~d~~~~~-~~--------------------------~~~------ 200 (352)
T 3gg9_A 160 GQTLGIFGYGKIGQLVAGYGRAF-G-----MNVLVWGRENSK-ER--------------------------ARA------ 200 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSHHHH-HH--------------------------HHH------
T ss_pred CCEEEEEeECHHHHHHHHHHHhC-C-----CEEEEECCCCCH-HH--------------------------HHh------
Confidence 47999999999999999999877 8 899999987521 10 000
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCc-hhHHHHH-HHHHHHhhccCCCCEEEEEeecC
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-TETKEVF-EEISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps-~~~~~vl-~~i~~~l~~~~~~~iIIs~tkGi 200 (461)
.++...+++++++++||+|++++|. ..++.++ ++..+.+++ ++++|.++.|=
T Consensus 201 -----------------------~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~---gailIN~aRg~ 254 (352)
T 3gg9_A 201 -----------------------DGFAVAESKDALFEQSDVLSVHLRLNDETRSIITVADLTRMKP---TALFVNTSRAE 254 (352)
T ss_dssp -----------------------TTCEECSSHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCT---TCEEEECSCGG
T ss_pred -----------------------cCceEeCCHHHHHhhCCEEEEeccCcHHHHHhhCHHHHhhCCC---CcEEEECCCch
Confidence 0234456888999999999999995 3444443 344455666 78999888774
Q ss_pred ccc
Q 012547 201 EAE 203 (461)
Q Consensus 201 ~~~ 203 (461)
..+
T Consensus 255 ~vd 257 (352)
T 3gg9_A 255 LVE 257 (352)
T ss_dssp GBC
T ss_pred hhc
Confidence 443
No 160
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=97.87 E-value=4.2e-05 Score=72.49 Aligned_cols=97 Identities=14% Similarity=0.284 Sum_probs=63.6
Q ss_pred hHHhhHHHHHhhcCCCCCCceEEEECccHHHHHHHHH--HHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhh
Q 012547 25 LEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAM--LQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSRED 102 (461)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~--La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~ 102 (461)
.++-++++++.+|... .+||+|||+|++|.+++.. +... |+ .-|-++|.+++++..
T Consensus 69 v~~L~~~~~~~lg~~~--~~rV~IIGAG~~G~~La~~~~~~~~-g~----~iVg~~D~dp~k~g~--------------- 126 (215)
T 2vt3_A 69 VDYLLSFFRKTLDQDE--MTDVILIGVGNLGTAFLHYNFTKNN-NT----KISMAFDINESKIGT--------------- 126 (215)
T ss_dssp HHHHHHHHHHHHHHC-----CEEEECCSHHHHHHHHCC-------C----CEEEEEESCTTTTTC---------------
T ss_pred hHHHHHHHHHHhCcCC--CCEEEEEccCHHHHHHHHHHhcccC-Cc----EEEEEEeCCHHHHHh---------------
Confidence 4455677787777643 4789999999999999995 3333 41 345578888754321
Q ss_pred hHHhhhhcccccchhhhhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHH
Q 012547 103 VLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISR 182 (461)
Q Consensus 103 ~~~~~~~n~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~ 182 (461)
...++ ++...+|+++.+++.|++++|+|+....++++.+..
T Consensus 127 ----------~i~gv-----------------------------~V~~~~dl~eli~~~D~ViIAvPs~~~~ei~~~l~~ 167 (215)
T 2vt3_A 127 ----------EVGGV-----------------------------PVYNLDDLEQHVKDESVAILTVPAVAAQSITDRLVA 167 (215)
T ss_dssp ----------EETTE-----------------------------EEEEGGGHHHHCSSCCEEEECSCHHHHHHHHHHHHH
T ss_pred ----------HhcCC-----------------------------eeechhhHHHHHHhCCEEEEecCchhHHHHHHHHHH
Confidence 11111 244567788887667999999999988888887754
No 161
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.86 E-value=4.1e-05 Score=75.35 Aligned_cols=95 Identities=8% Similarity=0.133 Sum_probs=65.6
Q ss_pred CceEEEECccHHHHH-HHHHHHHhcCCCCCCeeEE-EEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 43 PLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 43 ~mkI~IIGaGamG~a-lA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
++||+|||+|.||.. ++..|.+..+ .++. +++++++.++.+.++ |
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~-----~~l~av~d~~~~~~~~~a~~---------------------~------- 52 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSER-----FEFVGAFTPNKVKREKICSD---------------------Y------- 52 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSS-----SEEEEEECSCHHHHHHHHHH---------------------H-------
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCC-----eEEEEEECCCHHHHHHHHHH---------------------c-------
Confidence 479999999999996 8888876413 5655 899998765532110 0
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecC
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi 200 (461)
++...+|+++.+.++|+|++|+|+....+++.... .. +.. |.+-|.+
T Consensus 53 --------------------------~~~~~~~~~~ll~~~D~V~i~tp~~~h~~~~~~al---~~---gk~-vl~EKP~ 99 (308)
T 3uuw_A 53 --------------------------RIMPFDSIESLAKKCDCIFLHSSTETHYEIIKILL---NL---GVH-VYVDKPL 99 (308)
T ss_dssp --------------------------TCCBCSCHHHHHTTCSEEEECCCGGGHHHHHHHHH---HT---TCE-EEECSSS
T ss_pred --------------------------CCCCcCCHHHHHhcCCEEEEeCCcHhHHHHHHHHH---HC---CCc-EEEcCCC
Confidence 11125778888889999999999998888776654 33 344 3467766
Q ss_pred ccc
Q 012547 201 EAE 203 (461)
Q Consensus 201 ~~~ 203 (461)
...
T Consensus 100 ~~~ 102 (308)
T 3uuw_A 100 AST 102 (308)
T ss_dssp SSS
T ss_pred CCC
Confidence 543
No 162
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.85 E-value=7.5e-05 Score=74.26 Aligned_cols=93 Identities=17% Similarity=0.228 Sum_probs=65.1
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEE-EEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
++||+|||+|.||..++..|.+..+ .++. +++++++.++.+.+ . +
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~~~-----~~l~av~d~~~~~~~~~~~--------~-------------~-------- 48 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGNAD-----ARLVAVADAFPAAAEAIAG--------A-------------Y-------- 48 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTT-----EEEEEEECSSHHHHHHHHH--------H-------------T--------
T ss_pred ceEEEEECCCHHHHHHHHHHhhCCC-----cEEEEEECCCHHHHHHHHH--------H-------------h--------
Confidence 5799999999999999999987513 6665 78888765543110 0 0
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhc--CCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeec
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~--~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkG 199 (461)
++. .+|+++++. +.|+|++|+|+....+++..... . +.. |.+-|.
T Consensus 49 -------------------------~~~-~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~---~---gk~-v~~EKP 95 (331)
T 4hkt_A 49 -------------------------GCE-VRTIDAIEAAADIDAVVICTPTDTHADLIERFAR---A---GKA-IFCEKP 95 (331)
T ss_dssp -------------------------TCE-ECCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHH---T---TCE-EEECSC
T ss_pred -------------------------CCC-cCCHHHHhcCCCCCEEEEeCCchhHHHHHHHHHH---c---CCc-EEEecC
Confidence 234 578888876 78999999999988887766543 2 333 346666
Q ss_pred Ccc
Q 012547 200 VEA 202 (461)
Q Consensus 200 i~~ 202 (461)
+..
T Consensus 96 ~~~ 98 (331)
T 4hkt_A 96 IDL 98 (331)
T ss_dssp SCS
T ss_pred CCC
Confidence 544
No 163
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.85 E-value=9.7e-05 Score=73.25 Aligned_cols=95 Identities=19% Similarity=0.220 Sum_probs=65.3
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeE-EEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
+|||+|||+|.||..++..|.+. + +.++ .+++++++.++.+. + .+ .
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~-~----~~~~~~v~d~~~~~~~~~~---------~------------~~-~------ 47 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTS-G----EYQLVAIYSRKLETAATFA---------S------------RY-Q------ 47 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-T----SEEEEEEECSSHHHHHHHG---------G------------GS-S------
T ss_pred CeEEEEEeCCHHHHHHHHHHHhC-C----CeEEEEEEeCCHHHHHHHH---------H------------Hc-C------
Confidence 47999999999999999999875 3 2554 47888876543210 0 00 0
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHh-cCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecC
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAV-WDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av-~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi 200 (461)
.....+|+++++ .++|+|++|+|+....+++.... .. +..|+ +-|.+
T Consensus 48 -------------------------~~~~~~~~~~~l~~~~D~V~i~tp~~~h~~~~~~al---~~---gk~V~-~EKP~ 95 (325)
T 2ho3_A 48 -------------------------NIQLFDQLEVFFKSSFDLVYIASPNSLHFAQAKAAL---SA---GKHVI-LEKPA 95 (325)
T ss_dssp -------------------------SCEEESCHHHHHTSSCSEEEECSCGGGHHHHHHHHH---HT---TCEEE-EESSC
T ss_pred -------------------------CCeEeCCHHHHhCCCCCEEEEeCChHHHHHHHHHHH---Hc---CCcEE-EecCC
Confidence 124567888888 78999999999998888776653 33 34444 56665
Q ss_pred cc
Q 012547 201 EA 202 (461)
Q Consensus 201 ~~ 202 (461)
..
T Consensus 96 ~~ 97 (325)
T 2ho3_A 96 VS 97 (325)
T ss_dssp CS
T ss_pred cC
Confidence 44
No 164
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=97.84 E-value=7.8e-06 Score=82.14 Aligned_cols=95 Identities=18% Similarity=0.288 Sum_probs=68.1
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
-++|+|||.|.||.++|..+... | .+|..|+|+.+..+. ..
T Consensus 140 g~tvGIIGlG~IG~~vA~~l~~~-G-----~~V~~~dr~~~~~~~--------------------------~~------- 180 (324)
T 3hg7_A 140 GRTLLILGTGSIGQHIAHTGKHF-G-----MKVLGVSRSGRERAG--------------------------FD------- 180 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCCCTT--------------------------CS-------
T ss_pred cceEEEEEECHHHHHHHHHHHhC-C-----CEEEEEcCChHHhhh--------------------------hh-------
Confidence 47999999999999999999887 8 899999998632110 00
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCc-hhHHHHH-HHHHHHhhccCCCCEEEEEeecC
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-TETKEVF-EEISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps-~~~~~vl-~~i~~~l~~~~~~~iIIs~tkGi 200 (461)
......++++++++||+|++++|. ..++.++ ++....+++ ++++|.++.|=
T Consensus 181 ------------------------~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~---gailIN~aRG~ 233 (324)
T 3hg7_A 181 ------------------------QVYQLPALNKMLAQADVIVSVLPATRETHHLFTASRFEHCKP---GAILFNVGRGN 233 (324)
T ss_dssp ------------------------EEECGGGHHHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCT---TCEEEECSCGG
T ss_pred ------------------------cccccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCC---CcEEEECCCch
Confidence 111235788889999999999994 3444444 233344565 78999988875
Q ss_pred ccc
Q 012547 201 EAE 203 (461)
Q Consensus 201 ~~~ 203 (461)
..+
T Consensus 234 ~vd 236 (324)
T 3hg7_A 234 AIN 236 (324)
T ss_dssp GBC
T ss_pred hhC
Confidence 444
No 165
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=97.82 E-value=2.6e-05 Score=75.39 Aligned_cols=63 Identities=21% Similarity=0.312 Sum_probs=43.2
Q ss_pred CcccccccchhHHhhHHHHHhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012547 15 NGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (461)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (461)
.|-...+|-...--+.-|++. +. +... +|+|||+|.||.+++..|... | .+|++|+|+.++++
T Consensus 91 ~g~~~g~ntd~~g~~~~l~~~-~~-~l~~-~v~iiG~G~~g~~~a~~l~~~-g-----~~v~v~~r~~~~~~ 153 (263)
T 2d5c_A 91 EGRLFGFNTDAPGFLEALKAG-GI-PLKG-PALVLGAGGAGRAVAFALREA-G-----LEVWVWNRTPQRAL 153 (263)
T ss_dssp TTEEEEECCHHHHHHHHHHHT-TC-CCCS-CEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSHHHHH
T ss_pred CCeEEEeCCCHHHHHHHHHHh-CC-CCCC-eEEEECCcHHHHHHHHHHHHC-C-----CEEEEEECCHHHHH
Confidence 444444454443333334432 22 3334 899999999999999999988 7 78999999986554
No 166
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=97.82 E-value=2.3e-05 Score=81.07 Aligned_cols=96 Identities=17% Similarity=0.260 Sum_probs=69.9
Q ss_pred CCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhh
Q 012547 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (461)
Q Consensus 40 ~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (461)
+-.-++|+|||.|.||..+|..+... | .+|..|+|+.... ..
T Consensus 142 el~gktlGiIGlG~IG~~vA~~l~~~-G-----~~V~~~d~~~~~~----------------------------~~---- 183 (404)
T 1sc6_A 142 EARGKKLGIIGYGHIGTQLGILAESL-G-----MYVYFYDIENKLP----------------------------LG---- 183 (404)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCCC----------------------------CT----
T ss_pred ccCCCEEEEEeECHHHHHHHHHHHHC-C-----CEEEEEcCCchhc----------------------------cC----
Confidence 33457999999999999999999877 8 8999999875310 00
Q ss_pred hccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch-hHHHHH-HHHHHHhhccCCCCEEEEEe
Q 012547 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLA 197 (461)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~-~~~~vl-~~i~~~l~~~~~~~iIIs~t 197 (461)
.+....+++++++.||+|++++|.. .++.++ ++....+++ ++++|.++
T Consensus 184 ---------------------------~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~---ga~lIN~a 233 (404)
T 1sc6_A 184 ---------------------------NATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKP---GSLLINAS 233 (404)
T ss_dssp ---------------------------TCEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCT---TEEEEECS
T ss_pred ---------------------------CceecCCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCC---CeEEEECC
Confidence 1233457888899999999999964 455555 334455666 68888888
Q ss_pred ecCccc
Q 012547 198 KGVEAE 203 (461)
Q Consensus 198 kGi~~~ 203 (461)
.|=..+
T Consensus 234 Rg~~vd 239 (404)
T 1sc6_A 234 RGTVVD 239 (404)
T ss_dssp CSSSBC
T ss_pred CChHHh
Confidence 774433
No 167
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=97.81 E-value=2.3e-05 Score=81.25 Aligned_cols=93 Identities=23% Similarity=0.310 Sum_probs=66.6
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
-++|+|||.|.||..+|..+..- | .+|..|++++... ..
T Consensus 156 gktvGIIGlG~IG~~vA~~l~~~-G-----~~V~~yd~~~~~~----------------------------~~------- 194 (416)
T 3k5p_A 156 GKTLGIVGYGNIGSQVGNLAESL-G-----MTVRYYDTSDKLQ----------------------------YG------- 194 (416)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECTTCCCC----------------------------BT-------
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC-C-----CEEEEECCcchhc----------------------------cc-------
Confidence 47999999999999999999877 8 8999999875210 00
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch-hHHHHH-HHHHHHhhccCCCCEEEEEeecC
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~-~~~~vl-~~i~~~l~~~~~~~iIIs~tkGi 200 (461)
......++++++++||+|++++|.. .++.++ ++....+++ ++++|.++.|-
T Consensus 195 ------------------------~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~---gailIN~aRG~ 247 (416)
T 3k5p_A 195 ------------------------NVKPAASLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKK---GAFLINNARGS 247 (416)
T ss_dssp ------------------------TBEECSSHHHHHHHCSEEEECCCC-----CCBCHHHHHHSCT---TEEEEECSCTT
T ss_pred ------------------------CcEecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCC---CcEEEECCCCh
Confidence 1233467889999999999999963 455444 334445666 78899888775
Q ss_pred ccc
Q 012547 201 EAE 203 (461)
Q Consensus 201 ~~~ 203 (461)
..+
T Consensus 248 vvd 250 (416)
T 3k5p_A 248 DVD 250 (416)
T ss_dssp SBC
T ss_pred hhh
Confidence 444
No 168
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=97.81 E-value=7.7e-05 Score=74.64 Aligned_cols=96 Identities=16% Similarity=0.141 Sum_probs=65.8
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEE-EEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
++||+|||+|.||..++..|.+..+ .++. +++++++.++.+.+ . + +
T Consensus 2 ~~rvgiIG~G~~g~~~~~~l~~~~~-----~~l~av~d~~~~~~~~~~~--------~-------------~--~----- 48 (344)
T 3ezy_A 2 SLRIGVIGLGRIGTIHAENLKMIDD-----AILYAISDVREDRLREMKE--------K-------------L--G----- 48 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHGGGSTT-----EEEEEEECSCHHHHHHHHH--------H-------------H--T-----
T ss_pred eeEEEEEcCCHHHHHHHHHHHhCCC-----cEEEEEECCCHHHHHHHHH--------H-------------h--C-----
Confidence 4799999999999999999876413 5655 78898775543110 0 0 0
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhc--CCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeec
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~--~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkG 199 (461)
-....+|+++.+. ++|+|++|+|+....+++.... .. +..|+ +-|.
T Consensus 49 -------------------------~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al---~~---gk~v~-~EKP 96 (344)
T 3ezy_A 49 -------------------------VEKAYKDPHELIEDPNVDAVLVCSSTNTHSELVIACA---KA---KKHVF-CEKP 96 (344)
T ss_dssp -------------------------CSEEESSHHHHHHCTTCCEEEECSCGGGHHHHHHHHH---HT---TCEEE-EESC
T ss_pred -------------------------CCceeCCHHHHhcCCCCCEEEEcCCCcchHHHHHHHH---hc---CCeEE-EECC
Confidence 0135678888877 7999999999998887776654 33 33443 7776
Q ss_pred Cccc
Q 012547 200 VEAE 203 (461)
Q Consensus 200 i~~~ 203 (461)
+...
T Consensus 97 ~~~~ 100 (344)
T 3ezy_A 97 LSLN 100 (344)
T ss_dssp SCSC
T ss_pred CCCC
Confidence 5543
No 169
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=97.80 E-value=0.0001 Score=73.69 Aligned_cols=97 Identities=18% Similarity=0.146 Sum_probs=66.2
Q ss_pred CceEEEECccHHHHHHHHHHH-HhcCCCCCCeeEE-EEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQ-DSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La-~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
++||+|||+|.||..++..+. ...+ .++. +++++++.++.+.+ . + .
T Consensus 2 ~~rigiIG~G~~g~~~~~~l~~~~~~-----~~l~av~d~~~~~~~~~~~--------~-------------~-g----- 49 (344)
T 3mz0_A 2 SLRIGVIGTGAIGKEHINRITNKLSG-----AEIVAVTDVNQEAAQKVVE--------Q-------------Y-Q----- 49 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCSS-----EEEEEEECSSHHHHHHHHH--------H-------------T-T-----
T ss_pred eEEEEEECccHHHHHHHHHHHhhCCC-----cEEEEEEcCCHHHHHHHHH--------H-------------h-C-----
Confidence 479999999999999999998 4313 5654 78888775543110 0 0 0
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcC--CCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEee
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD--ADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~--aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tk 198 (461)
......+|+++.+.+ .|+|++|+|+....+++.... .. +..| .+-|
T Consensus 50 -------------------------~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al---~~---Gk~v-l~EK 97 (344)
T 3mz0_A 50 -------------------------LNATVYPNDDSLLADENVDAVLVTSWGPAHESSVLKAI---KA---QKYV-FCEK 97 (344)
T ss_dssp -------------------------CCCEEESSHHHHHHCTTCCEEEECSCGGGHHHHHHHHH---HT---TCEE-EECS
T ss_pred -------------------------CCCeeeCCHHHHhcCCCCCEEEECCCchhHHHHHHHHH---HC---CCcE-EEcC
Confidence 013566888888765 899999999998888776654 33 3333 4677
Q ss_pred cCccc
Q 012547 199 GVEAE 203 (461)
Q Consensus 199 Gi~~~ 203 (461)
.+...
T Consensus 98 P~a~~ 102 (344)
T 3mz0_A 98 PLATT 102 (344)
T ss_dssp CSCSS
T ss_pred CCCCC
Confidence 66543
No 170
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.79 E-value=6.8e-05 Score=67.92 Aligned_cols=40 Identities=15% Similarity=0.171 Sum_probs=33.7
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (461)
.++|.|+|+|.+|..+|..|.+..| ++|++++++++.++.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g-----~~V~vid~~~~~~~~ 78 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYG-----KISLGIEIREEAAQQ 78 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHC-----SCEEEEESCHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccC-----CeEEEEECCHHHHHH
Confidence 4689999999999999999986414 899999999876653
No 171
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.78 E-value=4e-05 Score=73.92 Aligned_cols=126 Identities=13% Similarity=0.169 Sum_probs=77.8
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEE-EEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
||||+|+|+|.||..++..+.+. + +++. +++++.+. .
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~-~-----~eLva~~d~~~~~-------------------------------~----- 40 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEK-G-----HEIVGVIENTPKA-------------------------------T----- 40 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEECSSCC--------------------------------------
T ss_pred ceEEEEECcCHHHHHHHHHHHhC-C-----CEEEEEEecCccc-------------------------------c-----
Confidence 58999999999999999999988 5 5433 34554320 0
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecCc
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~ 201 (461)
.++.+++|+++.+ ++|+||-++.+..+.+.++ +.. +..+|+.+.|+.
T Consensus 41 ------------------------~gv~v~~dl~~l~-~~DVvIDft~p~a~~~~~~-----l~~---g~~vVigTTG~s 87 (243)
T 3qy9_A 41 ------------------------TPYQQYQHIADVK-GADVAIDFSNPNLLFPLLD-----EDF---HLPLVVATTGEK 87 (243)
T ss_dssp ------------------------CCSCBCSCTTTCT-TCSEEEECSCHHHHHHHHT-----SCC---CCCEEECCCSSH
T ss_pred ------------------------CCCceeCCHHHHh-CCCEEEEeCChHHHHHHHH-----Hhc---CCceEeCCCCCC
Confidence 0233456777766 8999997776666555554 343 456677888986
Q ss_pred cccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEeCChhHHHHHHHHhcC
Q 012547 202 AELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRR 266 (461)
Q Consensus 202 ~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~~~~~~~~~l~~ll~~ 266 (461)
.+. .+.+.+... ...++..|||..-+.-- .+.++.+.+.|..
T Consensus 88 ~e~---------~~~l~~aa~----~~~v~~a~N~S~Gv~l~----------~~~~~~aa~~l~~ 129 (243)
T 3qy9_A 88 EKL---------LNKLDELSQ----NMPVFFSANMSYGVHAL----------TKILAAAVPLLDD 129 (243)
T ss_dssp HHH---------HHHHHHHTT----TSEEEECSSCCHHHHHH----------HHHHHHHHHHTTT
T ss_pred HHH---------HHHHHHHHh----cCCEEEECCccHHHHHH----------HHHHHHHHHhcCC
Confidence 541 133444432 24568889985422210 2345566667754
No 172
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.78 E-value=4.9e-05 Score=75.82 Aligned_cols=96 Identities=15% Similarity=0.081 Sum_probs=65.7
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEE-EEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
+++||+|||+|.||..++..|.+. . +.+|. +++++++.++.+.+ . +
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~-~----~~~l~av~d~~~~~~~~~~~--------~-------------~------- 50 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRES-A----QAEVRGIASRRLENAQKMAK--------E-------------L------- 50 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHS-S----SEEEEEEBCSSSHHHHHHHH--------H-------------T-------
T ss_pred CeEEEEEECchHHHHHHHHHHHhC-C----CcEEEEEEeCCHHHHHHHHH--------H-------------c-------
Confidence 458999999999999999999875 2 25655 78888776543110 0 0
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCe-EEecCHHHHhc--CCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEe
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPL-KVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i-~~t~dl~~av~--~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~t 197 (461)
++ .+.+|+++.+. ++|+|++|+|+....+++..... . +.. |.+-
T Consensus 51 --------------------------~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~---~---gk~-vl~E 97 (330)
T 3e9m_A 51 --------------------------AIPVAYGSYEELCKDETIDIIYIPTYNQGHYSAAKLALS---Q---GKP-VLLE 97 (330)
T ss_dssp --------------------------TCCCCBSSHHHHHHCTTCSEEEECCCGGGHHHHHHHHHH---T---TCC-EEEC
T ss_pred --------------------------CCCceeCCHHHHhcCCCCCEEEEcCCCHHHHHHHHHHHH---C---CCe-EEEe
Confidence 11 34577888776 78999999999988777766543 3 333 3466
Q ss_pred ecCccc
Q 012547 198 KGVEAE 203 (461)
Q Consensus 198 kGi~~~ 203 (461)
|.+...
T Consensus 98 KP~~~~ 103 (330)
T 3e9m_A 98 KPFTLN 103 (330)
T ss_dssp SSCCSS
T ss_pred CCCCCC
Confidence 665543
No 173
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=97.78 E-value=2.5e-05 Score=78.68 Aligned_cols=92 Identities=18% Similarity=0.222 Sum_probs=65.7
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
.++|+|||.|.||.++|..+... | .+|..|+|+.+.. . .. .
T Consensus 146 g~~vgIiG~G~IG~~~A~~l~~~-G-----~~V~~~d~~~~~~-~----------~~-------------~--------- 186 (333)
T 1j4a_A 146 DQVVGVVGTGHIGQVFMQIMEGF-G-----AKVITYDIFRNPE-L----------EK-------------K--------- 186 (333)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCHH-H----------HH-------------T---------
T ss_pred CCEEEEEccCHHHHHHHHHHHHC-C-----CEEEEECCCcchh-H----------Hh-------------h---------
Confidence 37999999999999999999877 7 8999999986421 0 00 0
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch-hHHHHH-HHHHHHhhccCCCCEEEEEeecC
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~-~~~~vl-~~i~~~l~~~~~~~iIIs~tkGi 200 (461)
+....+++++++.||+|++++|.. .++.++ +...+.+++ ++++|.++.|=
T Consensus 187 -------------------------~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~---ga~lIn~arg~ 238 (333)
T 1j4a_A 187 -------------------------GYYVDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQ---DVVIVNVSRGP 238 (333)
T ss_dssp -------------------------TCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCT---TEEEEECSCGG
T ss_pred -------------------------CeecCCHHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCC---CcEEEECCCCc
Confidence 011236778888999999999954 355444 334455665 67888887763
Q ss_pred c
Q 012547 201 E 201 (461)
Q Consensus 201 ~ 201 (461)
.
T Consensus 239 ~ 239 (333)
T 1j4a_A 239 L 239 (333)
T ss_dssp G
T ss_pred c
Confidence 3
No 174
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=97.77 E-value=0.00013 Score=73.58 Aligned_cols=97 Identities=18% Similarity=0.146 Sum_probs=66.8
Q ss_pred CceEEEECccHHHHHHHHHHH-HhcCCCCCCeeEE-EEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQ-DSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La-~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
++||+|||+|.||..++..+. ...+ .++. +++++++.++.+.++ | .
T Consensus 23 ~~rvgiIG~G~~g~~~~~~l~~~~~~-----~~lvav~d~~~~~~~~~a~~---------------------~-g----- 70 (357)
T 3ec7_A 23 TLKAGIVGIGMIGSDHLRRLANTVSG-----VEVVAVCDIVAGRAQAALDK---------------------Y-A----- 70 (357)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCTT-----EEEEEEECSSTTHHHHHHHH---------------------H-T-----
T ss_pred eeeEEEECCcHHHHHHHHHHHhhCCC-----cEEEEEEeCCHHHHHHHHHH---------------------h-C-----
Confidence 579999999999999999998 4313 6654 789988765531110 0 0
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhc--CCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEee
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~--~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tk 198 (461)
......+|+++.+. +.|+|++|+|+....+++..... . +.. |.+-|
T Consensus 71 -------------------------~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~---a---Gk~-Vl~EK 118 (357)
T 3ec7_A 71 -------------------------IEAKDYNDYHDLINDKDVEVVIITASNEAHADVAVAALN---A---NKY-VFCEK 118 (357)
T ss_dssp -------------------------CCCEEESSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHH---T---TCE-EEEES
T ss_pred -------------------------CCCeeeCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHH---C---CCC-EEeec
Confidence 01355678888876 48999999999988887766543 3 333 44777
Q ss_pred cCccc
Q 012547 199 GVEAE 203 (461)
Q Consensus 199 Gi~~~ 203 (461)
.+...
T Consensus 119 Pla~~ 123 (357)
T 3ec7_A 119 PLAVT 123 (357)
T ss_dssp SSCSS
T ss_pred CccCC
Confidence 76554
No 175
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=97.77 E-value=1.7e-05 Score=79.05 Aligned_cols=88 Identities=23% Similarity=0.271 Sum_probs=65.9
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
..++|+|||.|.||..+|..+... | .+|..|+|+.+..+
T Consensus 143 ~g~~vgIIG~G~IG~~~A~~l~~~-G-----~~V~~~d~~~~~~~----------------------------------- 181 (311)
T 2cuk_A 143 QGLTLGLVGMGRIGQAVAKRALAF-G-----MRVVYHARTPKPLP----------------------------------- 181 (311)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCSSS-----------------------------------
T ss_pred CCCEEEEEEECHHHHHHHHHHHHC-C-----CEEEEECCCCcccc-----------------------------------
Confidence 347999999999999999999887 7 89999998763110
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch-hHHHHHH-HHHHHhhccCCCCEEEEEeec
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVFE-EISRYWKERITVPVIISLAKG 199 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~-~~~~vl~-~i~~~l~~~~~~~iIIs~tkG 199 (461)
+. ..++++++++||+|++++|.. .++.++. +..+.+++ ++++|.++.|
T Consensus 182 --------------------------~~-~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~---ga~lin~srg 231 (311)
T 2cuk_A 182 --------------------------YP-FLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKR---GAILLNTARG 231 (311)
T ss_dssp --------------------------SC-BCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCT---TCEEEECSCG
T ss_pred --------------------------cc-cCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCC---CcEEEECCCC
Confidence 00 235677888999999999976 4555553 34455666 6888888876
Q ss_pred C
Q 012547 200 V 200 (461)
Q Consensus 200 i 200 (461)
=
T Consensus 232 ~ 232 (311)
T 2cuk_A 232 A 232 (311)
T ss_dssp G
T ss_pred C
Confidence 3
No 176
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=97.75 E-value=1.9e-05 Score=79.45 Aligned_cols=96 Identities=16% Similarity=0.225 Sum_probs=68.0
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
-++|+|||.|.||.++|..+... | .+|..|+|+....+. ....
T Consensus 145 g~tvGIIG~G~IG~~vA~~l~~~-G-----~~V~~~d~~~~~~~~--------------------------~~~~----- 187 (330)
T 4e5n_A 145 NATVGFLGMGAIGLAMADRLQGW-G-----ATLQYHEAKALDTQT--------------------------EQRL----- 187 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHTTTS-C-----CEEEEECSSCCCHHH--------------------------HHHH-----
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC-C-----CEEEEECCCCCcHhH--------------------------HHhc-----
Confidence 47999999999999999998876 7 899999998632221 0000
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch-hHHHHH-HHHHHHhhccCCCCEEEEEeecC
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~-~~~~vl-~~i~~~l~~~~~~~iIIs~tkGi 200 (461)
++.. .+++++++.||+|++++|.. .++.++ ++....+++ ++++|.++.|=
T Consensus 188 ------------------------g~~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~---gailIN~arg~ 239 (330)
T 4e5n_A 188 ------------------------GLRQ-VACSELFASSDFILLALPLNADTLHLVNAELLALVRP---GALLVNPCRGS 239 (330)
T ss_dssp ------------------------TEEE-CCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCT---TEEEEECSCGG
T ss_pred ------------------------Ccee-CCHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCC---CcEEEECCCCc
Confidence 2222 36888899999999999953 444444 345555666 68889888774
Q ss_pred ccc
Q 012547 201 EAE 203 (461)
Q Consensus 201 ~~~ 203 (461)
..+
T Consensus 240 ~vd 242 (330)
T 4e5n_A 240 VVD 242 (330)
T ss_dssp GBC
T ss_pred hhC
Confidence 433
No 177
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=97.75 E-value=3.6e-05 Score=77.60 Aligned_cols=94 Identities=14% Similarity=0.051 Sum_probs=67.9
Q ss_pred CCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 41 ~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
...++|+|||.|.||..+|..+... | .+|..|+|+.+.... ..
T Consensus 163 l~g~tvgIIGlG~IG~~vA~~l~~~-G-----~~V~~~d~~~~~~~~---------------------------~~---- 205 (335)
T 2g76_A 163 LNGKTLGILGLGRIGREVATRMQSF-G-----MKTIGYDPIISPEVS---------------------------AS---- 205 (335)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEECSSSCHHHH---------------------------HH----
T ss_pred CCcCEEEEEeECHHHHHHHHHHHHC-C-----CEEEEECCCcchhhh---------------------------hh----
Confidence 3447999999999999999999876 7 899999988642110 00
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch-hHHHHH-HHHHHHhhccCCCCEEEEEee
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAK 198 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~-~~~~vl-~~i~~~l~~~~~~~iIIs~tk 198 (461)
+ ++.. .++++++++||+|++++|.. .++.++ ++..+.+++ ++++|.+..
T Consensus 206 -----~--------------------g~~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~---gailIN~ar 256 (335)
T 2g76_A 206 -----F--------------------GVQQ-LPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKK---GVRVVNCAR 256 (335)
T ss_dssp -----T--------------------TCEE-CCHHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCT---TEEEEECSC
T ss_pred -----c--------------------Ccee-CCHHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCC---CcEEEECCC
Confidence 0 1222 37888899999999999975 455555 345556666 678888776
Q ss_pred cC
Q 012547 199 GV 200 (461)
Q Consensus 199 Gi 200 (461)
|=
T Consensus 257 g~ 258 (335)
T 2g76_A 257 GG 258 (335)
T ss_dssp TT
T ss_pred cc
Confidence 63
No 178
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.74 E-value=0.00014 Score=72.44 Aligned_cols=81 Identities=19% Similarity=0.200 Sum_probs=57.5
Q ss_pred CCceEEEECccHHHHHHHHHHH-HhcCCCCCCee-EEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhh
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQ-DSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La-~~~G~~~~~~~-V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (461)
+++||+|||+|.||..++..+. +..+ .+ |.+++++++.++.+.+ .+
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~-----~~~vav~d~~~~~~~~~a~---------------------~~------ 54 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQG-----VKLVAACALDSNQLEWAKN---------------------EL------ 54 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCSS-----EEEEEEECSCHHHHHHHHH---------------------TT------
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCCC-----cEEEEEecCCHHHHHHHHH---------------------Hh------
Confidence 4689999999999999999987 4313 66 4578888765442110 00
Q ss_pred hccCCccchhhhhhhcccccCCCCCCCCe-EEecCHHHHhc--CCCEEEEcCCchhHHHHHHHHH
Q 012547 120 RLGDRTLHADEILKDGFCLNMIDTPLCPL-KVVTNLQEAVW--DADIVINGLPSTETKEVFEEIS 181 (461)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i-~~t~dl~~av~--~aDiIIiaVps~~~~~vl~~i~ 181 (461)
++ .+.+|+++++. ++|+|++|+|+....+++....
T Consensus 55 ---------------------------g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al 92 (346)
T 3cea_A 55 ---------------------------GVETTYTNYKDMIDTENIDAIFIVAPTPFHPEMTIYAM 92 (346)
T ss_dssp ---------------------------CCSEEESCHHHHHTTSCCSEEEECSCGGGHHHHHHHHH
T ss_pred ---------------------------CCCcccCCHHHHhcCCCCCEEEEeCChHhHHHHHHHHH
Confidence 11 44578888776 6899999999988777766543
No 179
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.74 E-value=9.1e-05 Score=74.42 Aligned_cols=96 Identities=19% Similarity=0.362 Sum_probs=65.1
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeE-EEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
+++||+|||+|.||..++..+.+. . +.+| .+++++++.++.+.+ . +
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~-~----~~~lvav~d~~~~~~~~~~~--------~-------------~------- 50 (354)
T 3db2_A 4 NPVGVAAIGLGRWAYVMADAYTKS-E----KLKLVTCYSRTEDKREKFGK--------R-------------Y------- 50 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTC-S----SEEEEEEECSSHHHHHHHHH--------H-------------H-------
T ss_pred CcceEEEEccCHHHHHHHHHHHhC-C----CcEEEEEECCCHHHHHHHHH--------H-------------c-------
Confidence 457999999999999999988765 2 2664 488998876543110 0 0
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHh--cCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEee
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAV--WDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av--~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tk 198 (461)
++...+|+++++ .+.|+|++|+|+....+++.... .. +.. |.+-|
T Consensus 51 --------------------------g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al---~~---gk~-vl~EK 97 (354)
T 3db2_A 51 --------------------------NCAGDATMEALLAREDVEMVIITVPNDKHAEVIEQCA---RS---GKH-IYVEK 97 (354)
T ss_dssp --------------------------TCCCCSSHHHHHHCSSCCEEEECSCTTSHHHHHHHHH---HT---TCE-EEEES
T ss_pred --------------------------CCCCcCCHHHHhcCCCCCEEEEeCChHHHHHHHHHHH---Hc---CCE-EEEcc
Confidence 122257788887 56899999999988877766544 33 333 44677
Q ss_pred cCccc
Q 012547 199 GVEAE 203 (461)
Q Consensus 199 Gi~~~ 203 (461)
.+...
T Consensus 98 P~~~~ 102 (354)
T 3db2_A 98 PISVS 102 (354)
T ss_dssp SSCSS
T ss_pred CCCCC
Confidence 66543
No 180
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=97.74 E-value=3.8e-05 Score=77.72 Aligned_cols=92 Identities=21% Similarity=0.267 Sum_probs=66.4
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhccC
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (461)
++|+|||.|.||..+|..+..- | .+|..|+|+.+.. ...
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~-G-----~~V~~~d~~~~~~----------------------------~~~------- 187 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAM-G-----AKVIAYDVAYNPE----------------------------FEP------- 187 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCGG----------------------------GTT-------
T ss_pred CeEEEEecCHHHHHHHHHHhhC-C-----CEEEEECCChhhh----------------------------hhc-------
Confidence 7999999999999999999877 7 8999999986420 000
Q ss_pred CccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCc-hhHHHHH-HHHHHHhhccCCCCEEEEEeecCc
Q 012547 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-TETKEVF-EEISRYWKERITVPVIISLAKGVE 201 (461)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps-~~~~~vl-~~i~~~l~~~~~~~iIIs~tkGi~ 201 (461)
.... .++++++++||+|++++|. ..++.++ ++....+++ ++++|.++.|=.
T Consensus 188 -----------------------~~~~-~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~---gailIN~aRg~~ 240 (343)
T 2yq5_A 188 -----------------------FLTY-TDFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMKK---SAYLINCARGEL 240 (343)
T ss_dssp -----------------------TCEE-CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCT---TCEEEECSCGGG
T ss_pred -----------------------cccc-cCHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCCC---CcEEEECCCChh
Confidence 1122 2788899999999999994 3334333 234445566 788998887744
Q ss_pred cc
Q 012547 202 AE 203 (461)
Q Consensus 202 ~~ 203 (461)
.+
T Consensus 241 vd 242 (343)
T 2yq5_A 241 VD 242 (343)
T ss_dssp BC
T ss_pred hh
Confidence 43
No 181
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.70 E-value=0.00013 Score=72.02 Aligned_cols=95 Identities=15% Similarity=0.173 Sum_probs=61.4
Q ss_pred CCceEEEECccHHHHH-HHHHHHHhcCCCCCCeeEE-EEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhh
Q 012547 42 DPLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (461)
Q Consensus 42 ~~mkI~IIGaGamG~a-lA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (461)
+++||+|||+|.||.. ++..|.+..+ .++. +++++++.++.+.+ . +
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~~l~~~~~-----~~lvav~d~~~~~~~~~~~--------~-------------~------ 51 (319)
T 1tlt_A 4 KKLRIGVVGLGGIAQKAWLPVLAAASD-----WTLQGAWSPTRAKALPICE--------S-------------W------ 51 (319)
T ss_dssp -CEEEEEECCSTHHHHTHHHHHHSCSS-----EEEEEEECSSCTTHHHHHH--------H-------------H------
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCCC-----eEEEEEECCCHHHHHHHHH--------H-------------c------
Confidence 3589999999999996 8888875313 6665 89998876543111 0 0
Q ss_pred hccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeec
Q 012547 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (461)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkG 199 (461)
++.+.+|.++...++|+|++|+|+....+++.... .. +..|+ +-|.
T Consensus 52 ---------------------------g~~~~~~~~~l~~~~D~V~i~tp~~~h~~~~~~al---~~---G~~v~-~eKP 97 (319)
T 1tlt_A 52 ---------------------------RIPYADSLSSLAASCDAVFVHSSTASHFDVVSTLL---NA---GVHVC-VDKP 97 (319)
T ss_dssp ---------------------------TCCBCSSHHHHHTTCSEEEECSCTTHHHHHHHHHH---HT---TCEEE-EESS
T ss_pred ---------------------------CCCccCcHHHhhcCCCEEEEeCCchhHHHHHHHHH---Hc---CCeEE-EeCC
Confidence 11134556554467999999999988777776543 33 44444 5665
Q ss_pred Ccc
Q 012547 200 VEA 202 (461)
Q Consensus 200 i~~ 202 (461)
+..
T Consensus 98 ~~~ 100 (319)
T 1tlt_A 98 LAE 100 (319)
T ss_dssp SCS
T ss_pred CCC
Confidence 543
No 182
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.70 E-value=8e-05 Score=73.59 Aligned_cols=94 Identities=15% Similarity=0.268 Sum_probs=64.5
Q ss_pred CCCceEEEECccHHHHHHHHHHHHhcCCCCCCee-EEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhh
Q 012547 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (461)
Q Consensus 41 ~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~-V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (461)
.+++||+|||+|.||..++..|.+. + +.+ |.+++++++.++. +..
T Consensus 8 ~~~~~igiIG~G~~g~~~~~~l~~~-~----~~~~v~v~d~~~~~~~~--------------------------~~~--- 53 (315)
T 3c1a_A 8 NSPVRLALIGAGRWGKNYIRTIAGL-P----GAALVRLASSNPDNLAL--------------------------VPP--- 53 (315)
T ss_dssp -CCEEEEEEECTTTTTTHHHHHHHC-T----TEEEEEEEESCHHHHTT--------------------------CCT---
T ss_pred CCcceEEEECCcHHHHHHHHHHHhC-C----CcEEEEEEeCCHHHHHH--------------------------HHh---
Confidence 3568999999999999999999875 2 155 4588988764332 100
Q ss_pred hccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhc--CCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEe
Q 012547 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (461)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~--~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~t 197 (461)
.+...+|+++++. ++|+|++|+|+....+++.... +. +..|+ +-
T Consensus 54 ---------------------------~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al---~~---Gk~v~-~e 99 (315)
T 3c1a_A 54 ---------------------------GCVIESDWRSVVSAPEVEAVIIATPPATHAEITLAAI---AS---GKAVL-VE 99 (315)
T ss_dssp ---------------------------TCEEESSTHHHHTCTTCCEEEEESCGGGHHHHHHHHH---HT---TCEEE-EE
T ss_pred ---------------------------hCcccCCHHHHhhCCCCCEEEEeCChHHHHHHHHHHH---HC---CCcEE-Ec
Confidence 1234567777775 7999999999998887776643 33 44444 66
Q ss_pred ecCcc
Q 012547 198 KGVEA 202 (461)
Q Consensus 198 kGi~~ 202 (461)
|.+..
T Consensus 100 KP~~~ 104 (315)
T 3c1a_A 100 KPLTL 104 (315)
T ss_dssp SSSCS
T ss_pred CCCcC
Confidence 65543
No 183
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=97.70 E-value=0.00013 Score=72.55 Aligned_cols=96 Identities=13% Similarity=0.079 Sum_probs=65.7
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeE-EEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
+++||+|||+|.||..++..+.+. + +.++ .++++++++++.+. .
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~-~----~~~~~av~d~~~~~~~~~a-------------------------~----- 48 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLA-G----NGEVVAVSSRTLESAQAFA-------------------------N----- 48 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHH-C----SEEEEEEECSCSSTTCC---------------------------------
T ss_pred CceEEEEEechHHHHHHHHHHHhC-C----CcEEEEEEcCCHHHHHHHH-------------------------H-----
Confidence 357999999999999999998876 4 2444 47888876554311 0
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCe-EEecCHHHHhc--CCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEe
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPL-KVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i-~~t~dl~~av~--~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~t 197 (461)
.+ ++ .+.+|+++.+. +.|+|++|+|+....+++.... .. +..| .+-
T Consensus 49 ----~~--------------------~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al---~a---Gk~V-l~E 97 (329)
T 3evn_A 49 ----KY--------------------HLPKAYDKLEDMLADESIDVIYVATINQDHYKVAKAAL---LA---GKHV-LVE 97 (329)
T ss_dssp ----CC--------------------CCSCEESCHHHHHTCTTCCEEEECSCGGGHHHHHHHHH---HT---TCEE-EEE
T ss_pred ----Hc--------------------CCCcccCCHHHHhcCCCCCEEEECCCcHHHHHHHHHHH---HC---CCeE-EEc
Confidence 00 12 35678888887 7899999999988877776553 33 3443 477
Q ss_pred ecCccc
Q 012547 198 KGVEAE 203 (461)
Q Consensus 198 kGi~~~ 203 (461)
|-+...
T Consensus 98 KP~a~~ 103 (329)
T 3evn_A 98 KPFTLT 103 (329)
T ss_dssp SSCCSS
T ss_pred cCCcCC
Confidence 776543
No 184
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=97.70 E-value=3.9e-05 Score=77.29 Aligned_cols=94 Identities=22% Similarity=0.232 Sum_probs=67.1
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
-++|+|||.|.||.++|..+... | .+|..|+|+.+.... . .
T Consensus 141 g~tvgIiG~G~IG~~vA~~l~~~-G-----~~V~~~d~~~~~~~~-----------~--------------~-------- 181 (334)
T 2pi1_A 141 RLTLGVIGTGRIGSRVAMYGLAF-G-----MKVLCYDVVKREDLK-----------E--------------K-------- 181 (334)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCHHHH-----------H--------------T--------
T ss_pred CceEEEECcCHHHHHHHHHHHHC-c-----CEEEEECCCcchhhH-----------h--------------c--------
Confidence 37999999999999999999877 8 899999998743210 0 0
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch-hHHHHH-HHHHHHhhccCCCCEEEEEeecC
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~-~~~~vl-~~i~~~l~~~~~~~iIIs~tkGi 200 (461)
.+.. .++++++++||+|++++|.. .++.++ ++....+++ ++++|.++.|=
T Consensus 182 ------------------------g~~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~---gailIN~aRg~ 233 (334)
T 2pi1_A 182 ------------------------GCVY-TSLDELLKESDVISLHVPYTKETHHMINEERISLMKD---GVYLINTARGK 233 (334)
T ss_dssp ------------------------TCEE-CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCT---TEEEEECSCGG
T ss_pred ------------------------Ccee-cCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCC---CcEEEECCCCc
Confidence 1222 34888899999999999953 444433 344455666 68888888774
Q ss_pred ccc
Q 012547 201 EAE 203 (461)
Q Consensus 201 ~~~ 203 (461)
..+
T Consensus 234 ~vd 236 (334)
T 2pi1_A 234 VVD 236 (334)
T ss_dssp GBC
T ss_pred ccC
Confidence 443
No 185
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=97.68 E-value=0.00021 Score=71.92 Aligned_cols=95 Identities=18% Similarity=0.145 Sum_probs=65.3
Q ss_pred CceEEEECccHHHH-HHHHHHHHhcCCCCCCeeEE-EEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 43 PLRIVGVGAGAWGS-VFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 43 ~mkI~IIGaGamG~-alA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
++||+|||+|.||. .++..|.+. . +.+|. +++++++.++.+.+ . +
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~-~----~~~l~av~d~~~~~~~~~a~--------~-------------~------- 73 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAE-P----LTEVTAIASRRWDRAKRFTE--------R-------------F------- 73 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHC-T----TEEEEEEEESSHHHHHHHHH--------H-------------H-------
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhC-C----CeEEEEEEcCCHHHHHHHHH--------H-------------c-------
Confidence 58999999999998 788888765 2 26654 78898765543110 0 0
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhc--CCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEee
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~--~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tk 198 (461)
++...+|+++.+. +.|+|++|+|.....+++..... . +.. |.+-|
T Consensus 74 --------------------------g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~---a---Gk~-Vl~EK 120 (350)
T 3rc1_A 74 --------------------------GGEPVEGYPALLERDDVDAVYVPLPAVLHAEWIDRALR---A---GKH-VLAEK 120 (350)
T ss_dssp --------------------------CSEEEESHHHHHTCTTCSEEEECCCGGGHHHHHHHHHH---T---TCE-EEEES
T ss_pred --------------------------CCCCcCCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHH---C---CCc-EEEeC
Confidence 2233478888876 58999999999988887766543 3 344 44777
Q ss_pred cCccc
Q 012547 199 GVEAE 203 (461)
Q Consensus 199 Gi~~~ 203 (461)
-+...
T Consensus 121 P~a~~ 125 (350)
T 3rc1_A 121 PLTTD 125 (350)
T ss_dssp SSCSS
T ss_pred CCCCC
Confidence 76554
No 186
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=97.68 E-value=2.2e-05 Score=79.65 Aligned_cols=79 Identities=14% Similarity=0.195 Sum_probs=56.3
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
+.++|+|||+|.||.+++..|....+ ..+|.+|+|++++++++.++ +.. .+++
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~----~~~V~V~~r~~~~a~~la~~-----~~~--------------~~g~---- 180 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLG----IEEIVAYDTDPLATAKLIAN-----LKE--------------YSGL---- 180 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSC----CCEEEEECSSHHHHHHHHHH-----HTT--------------CTTC----
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCC----CcEEEEEcCCHHHHHHHHHH-----HHh--------------ccCc----
Confidence 45799999999999999988764312 16899999998876642210 000 0010
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchh
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE 172 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~ 172 (461)
.+...+++++++.++|+||.|||+..
T Consensus 181 -------------------------~~~~~~~~~eav~~aDiVi~aTps~~ 206 (350)
T 1x7d_A 181 -------------------------TIRRASSVAEAVKGVDIITTVTADKA 206 (350)
T ss_dssp -------------------------EEEECSSHHHHHTTCSEEEECCCCSS
T ss_pred -------------------------eEEEeCCHHHHHhcCCEEEEeccCCC
Confidence 24456789999999999999999863
No 187
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=97.67 E-value=3.5e-05 Score=77.48 Aligned_cols=92 Identities=17% Similarity=0.167 Sum_probs=65.8
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
.++|+|||.|.||..+|..+... | .+|..|+|+.+.. ...
T Consensus 146 g~~vgIiG~G~IG~~~A~~l~~~-G-----~~V~~~d~~~~~~----------------------------~~~------ 185 (331)
T 1xdw_A 146 NCTVGVVGLGRIGRVAAQIFHGM-G-----ATVIGEDVFEIKG----------------------------IED------ 185 (331)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCCS----------------------------CTT------
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-C-----CEEEEECCCccHH----------------------------HHh------
Confidence 37899999999999999999877 7 8999999876421 000
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch-hHHHHH-HHHHHHhhccCCCCEEEEEeecC
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~-~~~~vl-~~i~~~l~~~~~~~iIIs~tkGi 200 (461)
.+.. .++++++++||+|++++|.. .++.++ ++..+.+++ ++++|.++.|=
T Consensus 186 ------------------------~~~~-~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~mk~---ga~lin~srg~ 237 (331)
T 1xdw_A 186 ------------------------YCTQ-VSLDEVLEKSDIITIHAPYIKENGAVVTRDFLKKMKD---GAILVNCARGQ 237 (331)
T ss_dssp ------------------------TCEE-CCHHHHHHHCSEEEECCCCCTTTCCSBCHHHHHTSCT---TEEEEECSCGG
T ss_pred ------------------------cccc-CCHHHHHhhCCEEEEecCCchHHHHHhCHHHHhhCCC---CcEEEECCCcc
Confidence 0122 36788889999999999953 444444 334445666 68888888774
Q ss_pred cc
Q 012547 201 EA 202 (461)
Q Consensus 201 ~~ 202 (461)
..
T Consensus 238 ~v 239 (331)
T 1xdw_A 238 LV 239 (331)
T ss_dssp GB
T ss_pred cc
Confidence 33
No 188
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=97.66 E-value=4.9e-05 Score=76.52 Aligned_cols=89 Identities=13% Similarity=0.180 Sum_probs=64.7
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
.++|+|||.|.||..+|..+... | .+|..|+|+.+.. ...
T Consensus 145 g~~vgIiG~G~IG~~~A~~l~~~-G-----~~V~~~d~~~~~~----------------------------~~~------ 184 (333)
T 1dxy_A 145 QQTVGVMGTGHIGQVAIKLFKGF-G-----AKVIAYDPYPMKG----------------------------DHP------ 184 (333)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCSS----------------------------CCT------
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-C-----CEEEEECCCcchh----------------------------hHh------
Confidence 37999999999999999999877 7 8999999886321 000
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch-hHHHHH-HHHHHHhhccCCCCEEEEEeec
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKG 199 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~-~~~~vl-~~i~~~l~~~~~~~iIIs~tkG 199 (461)
.... .+++++++.||+|++++|.. .++.++ ++....+++ ++++|.++.|
T Consensus 185 ------------------------~~~~-~~l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~---ga~lIn~srg 235 (333)
T 1dxy_A 185 ------------------------DFDY-VSLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKP---GAIVINTARP 235 (333)
T ss_dssp ------------------------TCEE-CCHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCT---TEEEEECSCT
T ss_pred ------------------------cccc-CCHHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCC---CcEEEECCCC
Confidence 0122 36788889999999999964 344444 334455666 6788887766
No 189
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=97.66 E-value=0.00012 Score=72.06 Aligned_cols=38 Identities=13% Similarity=0.209 Sum_probs=33.3
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhh
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (461)
..++|+|||+|.+|.++|..+... | .+|++|+|+.+..
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~-G-----~~V~~~dr~~~~~ 191 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAAL-G-----AKVKVGARESDLL 191 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESSHHHH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC-C-----CEEEEEECCHHHH
Confidence 457999999999999999999887 7 8999999987543
No 190
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=97.66 E-value=0.00019 Score=63.37 Aligned_cols=96 Identities=13% Similarity=0.122 Sum_probs=66.1
Q ss_pred HHHHHhhcCCCCCCceEEEECc----cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHH
Q 012547 30 DELRRLMGKAEGDPLRIVGVGA----GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLR 105 (461)
Q Consensus 30 ~~~~~~~~~~~~~~mkI~IIGa----GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~ 105 (461)
+.|+++|.. +.+|+|||+ |.+|..++..|.+. | ++ +|..++.. +.
T Consensus 13 ~~l~~ll~~----p~~iaVVGas~~~g~~G~~~~~~l~~~-G-----~~--v~~Vnp~~-~~------------------ 61 (144)
T 2d59_A 13 EDIREILTR----YKKIALVGASPKPERDANIVMKYLLEH-G-----YD--VYPVNPKY-EE------------------ 61 (144)
T ss_dssp HHHHHHHHH----CCEEEEETCCSCTTSHHHHHHHHHHHT-T-----CE--EEEECTTC-SE------------------
T ss_pred HHHHHHHcC----CCEEEEEccCCCCCchHHHHHHHHHHC-C-----CE--EEEECCCC-Ce------------------
Confidence 456677732 458999999 79999999999988 8 65 66666531 10
Q ss_pred hhhhcccccchhhhhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhh
Q 012547 106 RLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWK 185 (461)
Q Consensus 106 ~~~~n~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~ 185 (461)
+. ++.+..++++.....|+++++||+....++++++... .
T Consensus 62 --------i~-------------------------------G~~~y~sl~~l~~~vDlvvi~vp~~~~~~vv~~~~~~-g 101 (144)
T 2d59_A 62 --------VL-------------------------------GRKCYPSVLDIPDKIEVVDLFVKPKLTMEYVEQAIKK-G 101 (144)
T ss_dssp --------ET-------------------------------TEECBSSGGGCSSCCSEEEECSCHHHHHHHHHHHHHH-T
T ss_pred --------EC-------------------------------CeeccCCHHHcCCCCCEEEEEeCHHHHHHHHHHHHHc-C
Confidence 10 2334455566556789999999999999999887753 1
Q ss_pred ccCCCCEEEEEeecCc
Q 012547 186 ERITVPVIISLAKGVE 201 (461)
Q Consensus 186 ~~~~~~iIIs~tkGi~ 201 (461)
. . .+.++.|..
T Consensus 102 i----~-~i~~~~g~~ 112 (144)
T 2d59_A 102 A----K-VVWFQYNTY 112 (144)
T ss_dssp C----S-EEEECTTCC
T ss_pred C----C-EEEECCCch
Confidence 1 2 234666764
No 191
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=97.64 E-value=7.4e-05 Score=76.19 Aligned_cols=95 Identities=18% Similarity=0.170 Sum_probs=66.4
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
-++|+|||.|.||.++|..+..- | .+|..|+++... +. ...
T Consensus 176 gktvGIIGlG~IG~~vA~~l~~f-G-----~~V~~~d~~~~~-~~--------------------------~~~------ 216 (365)
T 4hy3_A 176 GSEIGIVGFGDLGKALRRVLSGF-R-----ARIRVFDPWLPR-SM--------------------------LEE------ 216 (365)
T ss_dssp SSEEEEECCSHHHHHHHHHHTTS-C-----CEEEEECSSSCH-HH--------------------------HHH------
T ss_pred CCEEEEecCCcccHHHHHhhhhC-C-----CEEEEECCCCCH-HH--------------------------Hhh------
Confidence 37999999999999999998766 7 899999987531 10 000
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch-hHHHHH-HHHHHHhhccCCCCEEEEEeecC
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-ETKEVF-EEISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~-~~~~vl-~~i~~~l~~~~~~~iIIs~tkGi 200 (461)
..+. ..+++++++.||+|++++|.. .++.++ ++....+++ ++++|.++-|=
T Consensus 217 -----------------------~g~~-~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~---gailIN~aRG~ 269 (365)
T 4hy3_A 217 -----------------------NGVE-PASLEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRR---GAAFILLSRAD 269 (365)
T ss_dssp -----------------------TTCE-ECCHHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCT---TCEEEECSCGG
T ss_pred -----------------------cCee-eCCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCC---CcEEEECcCCc
Confidence 0122 247889999999999999954 555555 344555676 78999888774
Q ss_pred ccc
Q 012547 201 EAE 203 (461)
Q Consensus 201 ~~~ 203 (461)
..+
T Consensus 270 ~vd 272 (365)
T 4hy3_A 270 VVD 272 (365)
T ss_dssp GSC
T ss_pred hhC
Confidence 443
No 192
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=97.64 E-value=0.00019 Score=71.52 Aligned_cols=101 Identities=13% Similarity=0.167 Sum_probs=67.1
Q ss_pred ceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 44 mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
|||+|||+ |.+|++++..|+.. |.. ++|.++++++..... .+ +.. ...
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~-~~~---~ev~L~Di~~~~~~a------~d-L~~-------------~~~------- 49 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNS-PLV---SRLTLYDIAHTPGVA------AD-LSH-------------IET------- 49 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTC-TTC---SEEEEEESSSHHHHH------HH-HTT-------------SSS-------
T ss_pred CEEEEECCCChHHHHHHHHHHhC-CCC---cEEEEEeCCccHHHH------HH-Hhc-------------cCc-------
Confidence 79999998 99999999999977 531 689999998721110 00 100 000
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEE---ecCHHHHhcCCCEEEEcCC--c--------------hhHHHHHHHHHHH
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKV---VTNLQEAVWDADIVINGLP--S--------------TETKEVFEEISRY 183 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~---t~dl~~av~~aDiIIiaVp--s--------------~~~~~vl~~i~~~ 183 (461)
...+.. ++|+++++++||+||++.. . ..++++++.+.++
T Consensus 50 ----------------------~~~l~~~~~t~d~~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~ 107 (314)
T 1mld_A 50 ----------------------RATVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQH 107 (314)
T ss_dssp ----------------------SCEEEEEESGGGHHHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------CceEEEecCCCCHHHHhCCCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 002444 3688888999999999873 2 2366677777766
Q ss_pred hhccCCCCEEEEEeecCc
Q 012547 184 WKERITVPVIISLAKGVE 201 (461)
Q Consensus 184 l~~~~~~~iIIs~tkGi~ 201 (461)
.. +..+|.++|-+.
T Consensus 108 ~p----~a~viv~sNPv~ 121 (314)
T 1mld_A 108 CP----DAMICIISNPVN 121 (314)
T ss_dssp CT----TSEEEECSSCHH
T ss_pred CC----CeEEEEECCCcc
Confidence 53 467777777654
No 193
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.64 E-value=0.00021 Score=70.58 Aligned_cols=164 Identities=16% Similarity=0.141 Sum_probs=89.0
Q ss_pred ccccchhHHhhHHHHHhhcCCCCCCceEEEEC-ccHHHHHHHHHHHHhcCCCCCCeeE-EEEecCchhhhhhhhhhHHHH
Q 012547 19 HHTNGSLEERLDELRRLMGKAEGDPLRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEV 96 (461)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIG-aGamG~alA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~ 96 (461)
||.-|.||.. +.| .+++||+|+| +|.||..++..+....+ .++ -+++++.....-
T Consensus 6 ~~~~~~~~~~-----~~m----~~~irV~V~Ga~GrMGr~i~~~v~~~~~-----~eLvg~vd~~~~~~~G--------- 62 (288)
T 3ijp_A 6 HHHMGTLEAQ-----TQG----PGSMRLTVVGANGRMGRELITAIQRRKD-----VELCAVLVRKGSSFVD--------- 62 (288)
T ss_dssp ------------------------CEEEEESSTTSHHHHHHHHHHHTCSS-----EEEEEEBCCTTCTTTT---------
T ss_pred ccccchhhhh-----hhc----cCCeEEEEECCCCHHHHHHHHHHHhCCC-----CEEEEEEecCCccccc---------
Confidence 5667888753 233 2568999999 89999999999886512 443 345665321100
Q ss_pred HhhhhhhHHhhhhcccccchhhhhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHH
Q 012547 97 INSREDVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEV 176 (461)
Q Consensus 97 i~~~~~~~~~~~~n~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~v 176 (461)
. ..-.+.++ ...++.+++|+++++.++|+||-++++....+.
T Consensus 63 --~----------d~gel~G~--------------------------~~~gv~v~~dl~~ll~~aDVvIDFT~p~a~~~~ 104 (288)
T 3ijp_A 63 --K----------DASILIGS--------------------------DFLGVRITDDPESAFSNTEGILDFSQPQASVLY 104 (288)
T ss_dssp --S----------BGGGGTTC--------------------------SCCSCBCBSCHHHHTTSCSEEEECSCHHHHHHH
T ss_pred --c----------chHHhhcc--------------------------CcCCceeeCCHHHHhcCCCEEEEcCCHHHHHHH
Confidence 0 00001110 002466788999999999999999988776665
Q ss_pred HHHHHHHhhccCCCCEEEEEeecCccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEeCChhH
Q 012547 177 FEEISRYWKERITVPVIISLAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKW 256 (461)
Q Consensus 177 l~~i~~~l~~~~~~~iIIs~tkGi~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~~~~~~ 256 (461)
+..... . +..+|+.+.|+..+. -+.|.+... .+.++..|||..-+.-- .+.
T Consensus 105 ~~~~l~---~---Gv~vViGTTG~~~e~---------~~~L~~aa~----~~~~~~a~N~SiGv~ll----------~~l 155 (288)
T 3ijp_A 105 ANYAAQ---K---SLIHIIGTTGFSKTE---------EAQIADFAK----YTTIVKSGNMSLGVNLL----------ANL 155 (288)
T ss_dssp HHHHHH---H---TCEEEECCCCCCHHH---------HHHHHHHHT----TSEEEECSCCCHHHHHH----------HHH
T ss_pred HHHHHH---c---CCCEEEECCCCCHHH---------HHHHHHHhC----cCCEEEECCCcHHHHHH----------HHH
Confidence 555443 3 456777788886541 123555432 24568889985422210 234
Q ss_pred HHHHHHHhcCCCceEEe
Q 012547 257 RKPLAKFLRRPHFTVWD 273 (461)
Q Consensus 257 ~~~l~~ll~~~g~~v~~ 273 (461)
++.+.+.|. +++.+.+
T Consensus 156 ~~~aa~~l~-~~~dieI 171 (288)
T 3ijp_A 156 VKRAAKALD-DDFDIEI 171 (288)
T ss_dssp HHHHHHHSC-TTSEEEE
T ss_pred HHHHHHhcC-CCCCEEE
Confidence 566667775 3455544
No 194
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=97.63 E-value=0.00029 Score=74.23 Aligned_cols=136 Identities=21% Similarity=0.208 Sum_probs=81.8
Q ss_pred ceEEEECccHHHHHHH--HHHHHhcCCCC-CCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 44 LRIVGVGAGAWGSVFT--AMLQDSYGYLR-DKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 44 mkI~IIGaGamG~alA--~~La~~~G~~~-~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
|||+|||+|+.|.+.. ..++.. ..+. ...+|.++|.++++++.... ..+. .....
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~-~~l~~~~~ei~L~Di~~~rl~~~~~-----~~~~-------------~~~~~--- 58 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQT-DELSREDTHIYLMDVHERRLNASYI-----LARK-------------YVEEL--- 58 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTC-TTTCSTTCEEEEECSCHHHHHHHHH-----HHHH-------------HHHHH---
T ss_pred CEEEEECCCchhhHHHHHHHHHhh-HhcCCCCCEEEEECCCHHHHHHHHH-----HHHH-------------HHHHc---
Confidence 7999999999876532 334432 1111 01479999999887654211 1111 00100
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCc------------------------------
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS------------------------------ 170 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps------------------------------ 170 (461)
+ . ...+..|+|.++|+++||+||+++-.
T Consensus 59 -~---~------------------~~~i~~t~d~~eAl~gAD~Vi~~~g~~~~Rvg~~~~r~~de~~~ip~k~G~~~~~l 116 (477)
T 3u95_A 59 -N---S------------------PVKVVKTESLDEAIEGADFIINTAYPYDPRYHDSGSQRWDEVTKVGEKHGYYRGID 116 (477)
T ss_dssp -T---C------------------CCEEEEESCHHHHHTTCSEEEECCCCCCTTTCSSHHHHHHHHHHHHHHTTCTTCTT
T ss_pred -C---C------------------CeEEEEeCCHHHHhCCCCEEEECcccccccccccccccceeeeccCcccceeeccc
Confidence 0 0 01477899999999999999998611
Q ss_pred -h-------------------hHHHHHHHHHHHhhccCCCCEEEEEeecCccccccccccCCHHHHHHhHhCCCCCcEEE
Q 012547 171 -T-------------------ETKEVFEEISRYWKERITVPVIISLAKGVEAELEAVPRIITPTQMINRATGVPIENILY 230 (461)
Q Consensus 171 -~-------------------~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~~~~~~~~~~~~~se~i~~~lg~~~~~v~v 230 (461)
+ .+.++++++..+++ ++.++..+|-+..- ++.+.++.+.+ .+..
T Consensus 117 ~qet~g~gG~~~~lR~~~~i~v~~~i~~~i~~~~P----~A~~in~tNP~~i~----------t~a~~~~~~~k--~vGl 180 (477)
T 3u95_A 117 SQELNMVSTYTYVLSSYPDVKLALEIAEKMKKMAP----KAYLMQTANPVFEI----------TQAVRRWTGAN--IIGF 180 (477)
T ss_dssp CBTTBCCTTSCSTTTTHHHHHHHHHHHHHHHHHCT----TCEEEECSSCHHHH----------HHHHHHHHCCC--EEEE
T ss_pred ccccCCccchhHHHhhhhhHHHHHHHHHHHHhhCC----CeEEEEecChHHHH----------HHHHHHhCCCC--eEEE
Confidence 0 23467777777765 68999999877543 35666766532 2344
Q ss_pred EeCcchhHh
Q 012547 231 LGGPNIASE 239 (461)
Q Consensus 231 lsGPn~a~e 239 (461)
+-+|-...+
T Consensus 181 C~~~~~~~~ 189 (477)
T 3u95_A 181 CHGVAGVYE 189 (477)
T ss_dssp CCGGGHHHH
T ss_pred CCCHHHHHH
Confidence 455544333
No 195
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.63 E-value=0.00016 Score=74.22 Aligned_cols=118 Identities=17% Similarity=0.158 Sum_probs=66.8
Q ss_pred ccccch-hH-HhhHHHHHhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCC----CCCee-EEEEecCchhhhhhhhh
Q 012547 19 HHTNGS-LE-ERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYL----RDKVL-IRIWRRPGRSVDRATAE 91 (461)
Q Consensus 19 ~~~~~~-~~-~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~----~~~~~-V~l~~r~~~~~~~~~~~ 91 (461)
||.+|+ |. |.|.. ..+.+++||+|||+|.||...+..+.+. +.+ .+..+ |-+++++++++++..++
T Consensus 6 ~~~~~~~~~~~~~~~------~~Ms~klrvgiIG~G~ig~~h~~~~~~~-~~~~~~~~~~~elvav~d~~~~~a~~~a~~ 78 (412)
T 4gqa_A 6 HHSSGVDLGTENLYF------QSMSARLNIGLIGSGFMGQAHADAYRRA-AMFYPDLPKRPHLYALADQDQAMAERHAAK 78 (412)
T ss_dssp -------------------------CEEEEEEECCSHHHHHHHHHHHHH-HHHCTTSSSEEEEEEEECSSHHHHHHHHHH
T ss_pred ccccccccccccCcc------ccccccceEEEEcCcHHHHHHHHHHHhc-cccccccCCCeEEEEEEcCCHHHHHHHHHH
Confidence 677887 43 22322 2234568999999999999988888764 210 00134 44778888766542110
Q ss_pred hHHHHHhhhhhhHHhhhhcccccchhhhhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhc--CCCEEEEcCC
Q 012547 92 HLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLP 169 (461)
Q Consensus 92 ~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~--~aDiIIiaVp 169 (461)
| . ...+.+|+++.+. +.|+|++|+|
T Consensus 79 ---------------------~-~-------------------------------~~~~y~d~~~ll~~~~vD~V~I~tp 105 (412)
T 4gqa_A 79 ---------------------L-G-------------------------------AEKAYGDWRELVNDPQVDVVDITSP 105 (412)
T ss_dssp ---------------------H-T-------------------------------CSEEESSHHHHHHCTTCCEEEECSC
T ss_pred ---------------------c-C-------------------------------CCeEECCHHHHhcCCCCCEEEECCC
Confidence 0 0 1245678888775 5799999999
Q ss_pred chhHHHHHHHHHHHhhccCCCCEEEEEeecCccc
Q 012547 170 STETKEVFEEISRYWKERITVPVIISLAKGVEAE 203 (461)
Q Consensus 170 s~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~~~ 203 (461)
.....+++..... . +.. |.|-|-+...
T Consensus 106 ~~~H~~~~~~al~---a---Gkh-Vl~EKP~a~~ 132 (412)
T 4gqa_A 106 NHLHYTMAMAAIA---A---GKH-VYCEKPLAVN 132 (412)
T ss_dssp GGGHHHHHHHHHH---T---TCE-EEEESCSCSS
T ss_pred cHHHHHHHHHHHH---c---CCC-eEeecCCcCC
Confidence 9988877766543 3 333 4588887654
No 196
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=97.62 E-value=9.1e-05 Score=73.01 Aligned_cols=95 Identities=20% Similarity=0.239 Sum_probs=64.6
Q ss_pred CCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhh
Q 012547 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (461)
Q Consensus 40 ~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (461)
+...++|+|||+|.+|.++|..+... | .+|++|+|+.+..+.+ .+ + +.
T Consensus 154 ~l~g~~v~IiG~G~iG~~~a~~l~~~-G-----~~V~~~d~~~~~~~~~---------~~--------------~-g~-- 201 (300)
T 2rir_A 154 TIHGSQVAVLGLGRTGMTIARTFAAL-G-----ANVKVGARSSAHLARI---------TE--------------M-GL-- 201 (300)
T ss_dssp CSTTSEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESSHHHHHHH---------HH--------------T-TC--
T ss_pred CCCCCEEEEEcccHHHHHHHHHHHHC-C-----CEEEEEECCHHHHHHH---------HH--------------C-CC--
Confidence 34458999999999999999999887 7 8999999987543320 00 0 00
Q ss_pred hccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeec
Q 012547 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (461)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkG 199 (461)
......++++.++++|+|++++|...+.+ +....+++ +.++|.+.-|
T Consensus 202 ---------------------------~~~~~~~l~~~l~~aDvVi~~~p~~~i~~---~~~~~mk~---g~~lin~a~g 248 (300)
T 2rir_A 202 ---------------------------VPFHTDELKEHVKDIDICINTIPSMILNQ---TVLSSMTP---KTLILDLASR 248 (300)
T ss_dssp ---------------------------EEEEGGGHHHHSTTCSEEEECCSSCCBCH---HHHTTSCT---TCEEEECSST
T ss_pred ---------------------------eEEchhhHHHHhhCCCEEEECCChhhhCH---HHHHhCCC---CCEEEEEeCC
Confidence 01112467788899999999999854322 22234555 6788877654
No 197
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=97.61 E-value=0.00017 Score=72.16 Aligned_cols=38 Identities=11% Similarity=0.287 Sum_probs=31.4
Q ss_pred CCceEEEEC-ccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 42 DPLRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 42 ~~mkI~IIG-aGamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
++|||+|+| +|.+|.+++..|+.. |. .++|.+++++++
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~-g~---~~ev~l~Di~~~ 45 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMN-PL---VSVLHLYDVVNA 45 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHC-TT---EEEEEEEESSSH
T ss_pred CCCEEEEECCCChHHHHHHHHHHhC-CC---CCEEEEEeCCCc
Confidence 458999999 799999999999877 52 168999998875
No 198
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=97.60 E-value=5.5e-05 Score=77.54 Aligned_cols=93 Identities=23% Similarity=0.249 Sum_probs=65.5
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
.-++|+|||.|.||..+|..+... | .+|..|++..+..+ .
T Consensus 118 ~gktvGIIGlG~IG~~vA~~l~a~-G-----~~V~~~d~~~~~~~----------------------------~------ 157 (381)
T 3oet_A 118 RDRTIGIVGVGNVGSRLQTRLEAL-G-----IRTLLCDPPRAARG----------------------------D------ 157 (381)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECHHHHHTT----------------------------C------
T ss_pred CCCEEEEEeECHHHHHHHHHHHHC-C-----CEEEEECCChHHhc----------------------------c------
Confidence 347999999999999999999887 8 89999987532100 0
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch-h----HHHHH-HHHHHHhhccCCCCEEEE
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST-E----TKEVF-EEISRYWKERITVPVIIS 195 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~-~----~~~vl-~~i~~~l~~~~~~~iIIs 195 (461)
.. ...++++++++||+|++++|.. . ++.++ ++....+++ ++++|.
T Consensus 158 -------------------------~~-~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~---gailIN 208 (381)
T 3oet_A 158 -------------------------EG-DFRTLDELVQEADVLTFHTPLYKDGPYKTLHLADETLIRRLKP---GAILIN 208 (381)
T ss_dssp -------------------------CS-CBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBCHHHHHHSCT---TEEEEE
T ss_pred -------------------------Cc-ccCCHHHHHhhCCEEEEcCcCCccccccchhhcCHHHHhcCCC---CcEEEE
Confidence 01 1246888899999999999943 2 33333 233444565 688898
Q ss_pred EeecCccc
Q 012547 196 LAKGVEAE 203 (461)
Q Consensus 196 ~tkGi~~~ 203 (461)
++.|=..+
T Consensus 209 ~aRG~vvd 216 (381)
T 3oet_A 209 ACRGPVVD 216 (381)
T ss_dssp CSCGGGBC
T ss_pred CCCCcccC
Confidence 88775443
No 199
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=97.60 E-value=9.2e-05 Score=65.22 Aligned_cols=99 Identities=18% Similarity=0.157 Sum_probs=68.0
Q ss_pred HHHHHhhcCCCCCCceEEEECc----cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHH
Q 012547 30 DELRRLMGKAEGDPLRIVGVGA----GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLR 105 (461)
Q Consensus 30 ~~~~~~~~~~~~~~mkI~IIGa----GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~ 105 (461)
+++++++ .++.+|+|||+ |.+|..++..|.+. | ++ +|..++.+...
T Consensus 4 ~~l~~ll----~~p~~vaVvGas~~~g~~G~~~~~~l~~~-G-----~~--v~~vnp~~~~~------------------ 53 (140)
T 1iuk_A 4 QELRAYL----SQAKTIAVLGAHKDPSRPAHYVPRYLREQ-G-----YR--VLPVNPRFQGE------------------ 53 (140)
T ss_dssp HHHHHHH----HHCCEEEEETCCSSTTSHHHHHHHHHHHT-T-----CE--EEEECGGGTTS------------------
T ss_pred HHHHHHH----cCCCEEEEECCCCCCCChHHHHHHHHHHC-C-----CE--EEEeCCCcccC------------------
Confidence 4577777 23558999999 89999999999988 8 65 77777642110
Q ss_pred hhhhcccccchhhhhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhh
Q 012547 106 RLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWK 185 (461)
Q Consensus 106 ~~~~n~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~ 185 (461)
.+. ++.+..+++++....|++++++|+....++++++... .
T Consensus 54 -------~i~-------------------------------G~~~~~sl~el~~~vDlavi~vp~~~~~~v~~~~~~~-g 94 (140)
T 1iuk_A 54 -------ELF-------------------------------GEEAVASLLDLKEPVDILDVFRPPSALMDHLPEVLAL-R 94 (140)
T ss_dssp -------EET-------------------------------TEECBSSGGGCCSCCSEEEECSCHHHHTTTHHHHHHH-C
T ss_pred -------cCC-------------------------------CEEecCCHHHCCCCCCEEEEEeCHHHHHHHHHHHHHc-C
Confidence 010 2344455666556789999999999999999887753 2
Q ss_pred ccCCCCEEEEEeecCcc
Q 012547 186 ERITVPVIISLAKGVEA 202 (461)
Q Consensus 186 ~~~~~~iIIs~tkGi~~ 202 (461)
- .. +.++.|+..
T Consensus 95 i---~~--i~~~~g~~~ 106 (140)
T 1iuk_A 95 P---GL--VWLQSGIRH 106 (140)
T ss_dssp C---SC--EEECTTCCC
T ss_pred C---CE--EEEcCCcCH
Confidence 1 23 345667653
No 200
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.60 E-value=0.00024 Score=62.55 Aligned_cols=105 Identities=7% Similarity=0.018 Sum_probs=65.4
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc-hhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG-RSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~-~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
++|.|+|+|.+|..++..|.+. | ++|++++++. +.++.+.. ....+ ...+ .+
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~-g-----~~V~vid~~~~~~~~~~~~-----~~~~~-------------~~~i---~g 56 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQR-G-----QNVTVISNLPEDDIKQLEQ-----RLGDN-------------ADVI---PG 56 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECCCHHHHHHHHH-----HHCTT-------------CEEE---ES
T ss_pred CcEEEECCCHHHHHHHHHHHHC-C-----CCEEEEECCChHHHHHHHH-----hhcCC-------------CeEE---Ec
Confidence 5799999999999999999998 8 9999999974 43332110 00000 0000 00
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEecCHHHH-hcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecCc
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEA-VWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVE 201 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~a-v~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~ 201 (461)
| ..-...+.++ +.++|+||++++.+.....+....+.+.+ ...++..+++-.
T Consensus 57 d------------------------~~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~---~~~ii~~~~~~~ 109 (153)
T 1id1_A 57 D------------------------SNDSSVLKKAGIDRCRAILALSDNDADNAFVVLSAKDMSS---DVKTVLAVSDSK 109 (153)
T ss_dssp C------------------------TTSHHHHHHHTTTTCSEEEECSSCHHHHHHHHHHHHHHTS---SSCEEEECSSGG
T ss_pred C------------------------CCCHHHHHHcChhhCCEEEEecCChHHHHHHHHHHHHHCC---CCEEEEEECCHH
Confidence 1 0001123344 78999999999998777666666655543 345666665544
Q ss_pred c
Q 012547 202 A 202 (461)
Q Consensus 202 ~ 202 (461)
.
T Consensus 110 ~ 110 (153)
T 1id1_A 110 N 110 (153)
T ss_dssp G
T ss_pred H
Confidence 3
No 201
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=97.59 E-value=0.00024 Score=70.37 Aligned_cols=93 Identities=15% Similarity=0.084 Sum_probs=61.6
Q ss_pred ceEEEECccHHHHHH-HHHHHHhcCCCCCCeeE-EEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 44 LRIVGVGAGAWGSVF-TAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 44 mkI~IIGaGamG~al-A~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
|||+|||+|.||..+ +..|.+. + .++ .+++++++.++.+.+ . + .
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~-~-----~~~vav~d~~~~~~~~~~~--------~-------------~-g------ 46 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRAT-G-----GEVVSMMSTSAERGAAYAT--------E-------------N-G------ 46 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHT-T-----CEEEEEECSCHHHHHHHHH--------H-------------T-T------
T ss_pred CeEEEEcccHHHHHhhhHHhhcC-C-----CeEEEEECCCHHHHHHHHH--------H-------------c-C------
Confidence 689999999999998 7777765 5 665 488998865543110 0 0 0
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhc--CCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeec
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~--~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkG 199 (461)
.....+|+++++. ++|+|++|+|+....+++.... .. +..|+ +-|.
T Consensus 47 -------------------------~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al---~~---Gk~v~-~ekP 94 (332)
T 2glx_A 47 -------------------------IGKSVTSVEELVGDPDVDAVYVSTTNELHREQTLAAI---RA---GKHVL-CEKP 94 (332)
T ss_dssp -------------------------CSCCBSCHHHHHTCTTCCEEEECSCGGGHHHHHHHHH---HT---TCEEE-ECSS
T ss_pred -------------------------CCcccCCHHHHhcCCCCCEEEEeCChhHhHHHHHHHH---HC---CCeEE-EeCC
Confidence 0023467777775 5899999999998877776543 33 44444 5665
Q ss_pred Ccc
Q 012547 200 VEA 202 (461)
Q Consensus 200 i~~ 202 (461)
+..
T Consensus 95 ~~~ 97 (332)
T 2glx_A 95 LAM 97 (332)
T ss_dssp SCS
T ss_pred CcC
Confidence 543
No 202
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=97.57 E-value=3.9e-05 Score=78.67 Aligned_cols=92 Identities=16% Similarity=0.201 Sum_probs=65.7
Q ss_pred CCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 41 ~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
-..++|+|||.|.||..+|..|... | .+|..|+++.+..+ .
T Consensus 114 l~g~tvGIIGlG~IG~~vA~~l~~~-G-----~~V~~~d~~~~~~~---------------------------~------ 154 (380)
T 2o4c_A 114 LAERTYGVVGAGQVGGRLVEVLRGL-G-----WKVLVCDPPRQARE---------------------------P------ 154 (380)
T ss_dssp GGGCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECHHHHHHS---------------------------T------
T ss_pred cCCCEEEEEeCCHHHHHHHHHHHHC-C-----CEEEEEcCChhhhc---------------------------c------
Confidence 3447999999999999999999877 8 89999987643100 0
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchh-----HHHHH-HHHHHHhhccCCCCEEE
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTE-----TKEVF-EEISRYWKERITVPVII 194 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~-----~~~vl-~~i~~~l~~~~~~~iII 194 (461)
... ..++++++++||+|++++|... ++.++ ++..+.+++ ++++|
T Consensus 155 --------------------------g~~-~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk~---gailI 204 (380)
T 2o4c_A 155 --------------------------DGE-FVSLERLLAEADVISLHTPLNRDGEHPTRHLLDEPRLAALRP---GTWLV 204 (380)
T ss_dssp --------------------------TSC-CCCHHHHHHHCSEEEECCCCCSSSSSCCTTSBCHHHHHTSCT---TEEEE
T ss_pred --------------------------Ccc-cCCHHHHHHhCCEEEEeccCccccccchhhhcCHHHHhhCCC---CcEEE
Confidence 001 1467788889999999999543 44444 344455666 68888
Q ss_pred EEeecCc
Q 012547 195 SLAKGVE 201 (461)
Q Consensus 195 s~tkGi~ 201 (461)
.++.|=.
T Consensus 205 N~sRG~v 211 (380)
T 2o4c_A 205 NASRGAV 211 (380)
T ss_dssp ECSCGGG
T ss_pred ECCCCcc
Confidence 8887743
No 203
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.56 E-value=0.00023 Score=70.91 Aligned_cols=97 Identities=16% Similarity=0.101 Sum_probs=64.9
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCee-EEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~-V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
++||+|||+|.||..++..+... +. .+.+ |.+++|++++++.+.++ |
T Consensus 2 ~~rigiiG~G~ig~~~~~~l~~~-~~--~~~~l~av~d~~~~~a~~~a~~---------------------~-------- 49 (334)
T 3ohs_X 2 ALRWGIVSVGLISSDFTAVLQTL-PR--SEHQVVAVAARDLSRAKEFAQK---------------------H-------- 49 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTS-CT--TTEEEEEEECSSHHHHHHHHHH---------------------H--------
T ss_pred ccEEEEECchHHHHHHHHHHHhC-CC--CCeEEEEEEcCCHHHHHHHHHH---------------------c--------
Confidence 47999999999999999888754 20 0123 55788887665432110 0
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCe-EEecCHHHHhc--CCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEee
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPL-KVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i-~~t~dl~~av~--~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tk 198 (461)
++ .+.+|+++.+. +.|+|++|+|.....+++.+.. .. +.. |.+-|
T Consensus 50 -------------------------~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al---~~---Gkh-Vl~EK 97 (334)
T 3ohs_X 50 -------------------------DIPKAYGSYEELAKDPNVEVAYVGTQHPQHKAAVMLCL---AA---GKA-VLCEK 97 (334)
T ss_dssp -------------------------TCSCEESSHHHHHHCTTCCEEEECCCGGGHHHHHHHHH---HT---TCE-EEEES
T ss_pred -------------------------CCCcccCCHHHHhcCCCCCEEEECCCcHHHHHHHHHHH---hc---CCE-EEEEC
Confidence 11 34578888776 5899999999998877776654 33 333 44777
Q ss_pred cCccc
Q 012547 199 GVEAE 203 (461)
Q Consensus 199 Gi~~~ 203 (461)
-+...
T Consensus 98 P~a~~ 102 (334)
T 3ohs_X 98 PMGVN 102 (334)
T ss_dssp SSSSS
T ss_pred CCCCC
Confidence 76554
No 204
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.56 E-value=0.00032 Score=70.57 Aligned_cols=100 Identities=14% Similarity=0.106 Sum_probs=65.3
Q ss_pred CCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeE-EEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhh
Q 012547 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (461)
Q Consensus 41 ~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (461)
.+++||+|||+|.||..++..|... . +.++ .+++++++.++.+.+ . + .
T Consensus 4 ~~~~~vgiiG~G~ig~~~~~~l~~~-~----~~~lv~v~d~~~~~~~~~a~--------~-------------~-~---- 52 (362)
T 1ydw_A 4 ETQIRIGVMGCADIARKVSRAIHLA-P----NATISGVASRSLEKAKAFAT--------A-------------N-N---- 52 (362)
T ss_dssp --CEEEEEESCCTTHHHHHHHHHHC-T----TEEEEEEECSSHHHHHHHHH--------H-------------T-T----
T ss_pred CCceEEEEECchHHHHHHHHHHhhC-C----CcEEEEEEcCCHHHHHHHHH--------H-------------h-C----
Confidence 3568999999999999999988865 2 1554 578888765443110 0 0 0
Q ss_pred hccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhc--CCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEe
Q 012547 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (461)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~--~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~t 197 (461)
++ ......+|+++++. ++|+|++|+|+....+++.... .. +..|+ +-
T Consensus 53 ------~~------------------~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al---~a---Gk~V~-~E 101 (362)
T 1ydw_A 53 ------YP------------------ESTKIHGSYESLLEDPEIDALYVPLPTSLHVEWAIKAA---EK---GKHIL-LE 101 (362)
T ss_dssp ------CC------------------TTCEEESSHHHHHHCTTCCEEEECCCGGGHHHHHHHHH---TT---TCEEE-EC
T ss_pred ------CC------------------CCCeeeCCHHHHhcCCCCCEEEEcCChHHHHHHHHHHH---HC---CCeEE-Ee
Confidence 00 02345678888775 5899999999998887776543 33 44444 56
Q ss_pred ecCcc
Q 012547 198 KGVEA 202 (461)
Q Consensus 198 kGi~~ 202 (461)
|.+..
T Consensus 102 KP~a~ 106 (362)
T 1ydw_A 102 KPVAM 106 (362)
T ss_dssp SSCSS
T ss_pred cCCcC
Confidence 75544
No 205
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.54 E-value=0.00028 Score=69.05 Aligned_cols=148 Identities=12% Similarity=0.094 Sum_probs=89.0
Q ss_pred CceEEEEC-ccHHHHHHHHHHHHhcCCCCCCeeEE-EEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 43 PLRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 43 ~mkI~IIG-aGamG~alA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
+|||+|+| +|.||..++..+....+ .++. +++|+.....- . ....+.+.
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~-----~eLv~~~d~~~~~~~G-------------~--------d~gel~g~--- 57 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPD-----ATLVGALDRTGSPQLG-------------Q--------DAGAFLGK--- 57 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTT-----EEEEEEBCCTTCTTTT-------------S--------BTTTTTTC---
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCC-----CEEEEEEEecCccccc-------------c--------cHHHHhCC---
Confidence 58999999 79999999999887622 5544 35665421100 0 00000000
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecC
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi 200 (461)
..++.+++|+++++.++|+||-++++....+.++.... . +..+|+.+.|+
T Consensus 58 ------------------------~~gv~v~~dl~~ll~~~DVVIDfT~p~a~~~~~~~al~---~---G~~vVigTTG~ 107 (272)
T 4f3y_A 58 ------------------------QTGVALTDDIERVCAEADYLIDFTLPEGTLVHLDAALR---H---DVKLVIGTTGF 107 (272)
T ss_dssp ------------------------CCSCBCBCCHHHHHHHCSEEEECSCHHHHHHHHHHHHH---H---TCEEEECCCCC
T ss_pred ------------------------CCCceecCCHHHHhcCCCEEEEcCCHHHHHHHHHHHHH---c---CCCEEEECCCC
Confidence 01355678999988899999999998887776666543 3 45677778888
Q ss_pred ccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEeCChhHHHHHHHHhcCCCceEEe
Q 012547 201 EAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWD 273 (461)
Q Consensus 201 ~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~v~~ 273 (461)
+.+. -+.+.+... ...++..|||..-+.-- .+.++.+.+.|. +++.+.+
T Consensus 108 s~~~---------~~~L~~aa~----~~~vv~a~N~s~Gv~l~----------~~~~~~aa~~l~-~~~diei 156 (272)
T 4f3y_A 108 SEPQ---------KAQLRAAGE----KIALVFSANMSVGVNVT----------MKLLEFAAKQFA-QGYDIEI 156 (272)
T ss_dssp CHHH---------HHHHHHHTT----TSEEEECSCCCHHHHHH----------HHHHHHHHHHTS-SSCEEEE
T ss_pred CHHH---------HHHHHHHhc----cCCEEEECCCCHHHHHH----------HHHHHHHHHhcC-cCCCEEE
Confidence 6541 133445432 23568888885422110 234556667775 3455543
No 206
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.54 E-value=0.00013 Score=72.38 Aligned_cols=40 Identities=15% Similarity=0.284 Sum_probs=30.9
Q ss_pred CceEEEECccHHHH-HHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012547 43 PLRIVGVGAGAWGS-VFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (461)
Q Consensus 43 ~mkI~IIGaGamG~-alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (461)
++||+|||+|.||. +++..|.+..+ .+|.++++++++++.
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~~~-----~~l~v~d~~~~~~~~ 42 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQWPD-----IELVLCTRNPKVLGT 42 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTSTT-----EEEEEECSCHHHHHH
T ss_pred CcEEEEECCCHHHHHHHHHHHHhCCC-----ceEEEEeCCHHHHHH
Confidence 47999999999998 58888865413 677799998876543
No 207
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.53 E-value=9.2e-05 Score=75.41 Aligned_cols=41 Identities=22% Similarity=0.367 Sum_probs=33.9
Q ss_pred CCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012547 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (461)
Q Consensus 40 ~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (461)
+++.+||+|||+|.||.+++..|++. ++|++++|+.+++++
T Consensus 13 ~~~~~~v~IiGaG~iG~~ia~~L~~~-------~~V~V~~R~~~~a~~ 53 (365)
T 2z2v_A 13 EGRHMKVLILGAGNIGRAIAWDLKDE-------FDVYIGDVNNENLEK 53 (365)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHTTT-------SEEEEEESCHHHHHH
T ss_pred cCCCCeEEEEcCCHHHHHHHHHHHcC-------CeEEEEECCHHHHHH
Confidence 45678999999999999999999876 689999999887654
No 208
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=97.53 E-value=0.00032 Score=70.21 Aligned_cols=110 Identities=15% Similarity=0.185 Sum_probs=69.8
Q ss_pred CCceEEEECc-cHHHHHHHHHHHHhcCCCC--CCeeEEEEecC----chhhhhhhhhhHHHHHhhhhhhHHhhhhccccc
Q 012547 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLR--DKVLIRIWRRP----GRSVDRATAEHLFEVINSREDVLRRLIRRCAYL 114 (461)
Q Consensus 42 ~~mkI~IIGa-GamG~alA~~La~~~G~~~--~~~~V~l~~r~----~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l 114 (461)
++|||+|+|+ |.+|++++..|+.. |++. ...+|.+++++ +++++.. ..+ +... ..
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~-~~~~~~~~~ev~l~Di~~~~~~~~~~g~----~~d-l~~~------------~~ 65 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANG-DMLGKDQPVILQLLEIPNEKAQKALQGV----MME-IDDC------------AF 65 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTT-TTTCTTCCEEEEEECCSCHHHHHHHHHH----HHH-HHTT------------TC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhC-CCcCCCCCCEEEEEcCCCccccccchhh----HHH-Hhhh------------cc
Confidence 4689999998 99999999999987 6321 01389999998 4333210 000 1100 00
Q ss_pred chhhhhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCC--c--------------hhHHHHHH
Q 012547 115 KYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLP--S--------------TETKEVFE 178 (461)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVp--s--------------~~~~~vl~ 178 (461)
+. ...+..++|+.+++++||+||++.. . ..++++++
T Consensus 66 ~~----------------------------~~~i~~~~~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~ 117 (329)
T 1b8p_A 66 PL----------------------------LAGMTAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGK 117 (329)
T ss_dssp TT----------------------------EEEEEEESSHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred cc----------------------------cCcEEEecCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 00 0146677899999999999999763 1 12555666
Q ss_pred HHHHHhhccCCCCEEEEEeecC
Q 012547 179 EISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 179 ~i~~~l~~~~~~~iIIs~tkGi 200 (461)
.+..+..+ +..+|.++|-+
T Consensus 118 ~i~~~~~p---~a~ii~~SNPv 136 (329)
T 1b8p_A 118 AIDAVASR---NIKVLVVGNPA 136 (329)
T ss_dssp HHHHHSCT---TCEEEECSSSH
T ss_pred HHHHhcCC---CeEEEEccCch
Confidence 66665423 56788788755
No 209
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=97.51 E-value=0.00016 Score=69.97 Aligned_cols=91 Identities=19% Similarity=0.130 Sum_probs=62.5
Q ss_pred eEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhccC
Q 012547 45 RIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (461)
Q Consensus 45 kI~IIGaGamG~alA~~La~~~G~~~~~~-~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (461)
+|+|||+|.||.+++..|++. | . +|++++|+.++++++. ..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~-G-----~~~I~v~nR~~~ka~~la-------------------------~~------- 151 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQM-G-----VKDIWVVNRTIERAKALD-------------------------FP------- 151 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-T-----CCCEEEEESCHHHHHTCC-------------------------SS-------
T ss_pred eEEEECcHHHHHHHHHHHHHc-C-----CCEEEEEeCCHHHHHHHH-------------------------HH-------
Confidence 899999999999999999998 8 5 8999999987654311 00
Q ss_pred CccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHH-HHHhhccCCCCEEEEEeec
Q 012547 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEI-SRYWKERITVPVIISLAKG 199 (461)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i-~~~l~~~~~~~iIIs~tkG 199 (461)
+ ......++.+++.++|+||.|||.....+. ..+ ...+++ +++++++.-+
T Consensus 152 --~--------------------~~~~~~~~~~~~~~aDiVInatp~gm~p~~-~~i~~~~l~~---~~~V~Divy~ 202 (253)
T 3u62_A 152 --V--------------------KIFSLDQLDEVVKKAKSLFNTTSVGMKGEE-LPVSDDSLKN---LSLVYDVIYF 202 (253)
T ss_dssp --C--------------------EEEEGGGHHHHHHTCSEEEECSSTTTTSCC-CSCCHHHHTT---CSEEEECSSS
T ss_pred --c--------------------ccCCHHHHHhhhcCCCEEEECCCCCCCCCC-CCCCHHHhCc---CCEEEEeeCC
Confidence 0 111235566778899999999985321110 011 123454 6788998877
No 210
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=97.48 E-value=0.00062 Score=68.83 Aligned_cols=130 Identities=18% Similarity=0.163 Sum_probs=71.0
Q ss_pred ccccchhHHhhHHHHHhhcCCCCCCceEEEECc-cHHHHHHHHHHHHhcCCCCCC--eeEEEEecCchhhhhhhhhhHHH
Q 012547 19 HHTNGSLEERLDELRRLMGKAEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDK--VLIRIWRRPGRSVDRATAEHLFE 95 (461)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGa-GamG~alA~~La~~~G~~~~~--~~V~l~~r~~~~~~~~~~~~l~~ 95 (461)
||.-|.++.+ -++..+-...||+|+|| |.+|.+++..|+.. .++.++ .++.|+|.++... .. +++.-
T Consensus 6 ~~~~~~~~~~------~~~~~s~~~vKVaViGAaG~IG~~la~~la~~-~l~~~~~~~eL~L~Di~~~~~-~~--~Gva~ 75 (345)
T 4h7p_A 6 HHHMGTLEAQ------TQGPGSMSAVKVAVTGAAGQIGYALVPLIARG-ALLGPTTPVELRLLDIEPALK-AL--AGVEA 75 (345)
T ss_dssp ----------------------CCCEEEEEESTTSHHHHHHHHHHHHT-TTTCTTCCEEEEEECCGGGHH-HH--HHHHH
T ss_pred cccccccccc------ccCCCCCCCCEEEEECcCcHHHHHHHHHHHhc-cccCCCCccEEEEECCCCccc-cc--hhhhh
Confidence 5556777765 23334434469999997 99999999999987 443221 3789999876321 11 11110
Q ss_pred HHhhhhhhHHhhhhcccccchhhhhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcC--Cc---
Q 012547 96 VINSREDVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL--PS--- 170 (461)
Q Consensus 96 ~i~~~~~~~~~~~~n~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaV--ps--- 170 (461)
-++.. -.+. ...+..++|..+++++||+||++- |.
T Consensus 76 DL~~~------------~~~~----------------------------~~~~~~~~~~~~a~~~advVvi~aG~prkpG 115 (345)
T 4h7p_A 76 ELEDC------------AFPL----------------------------LDKVVVTADPRVAFDGVAIAIMCGAFPRKAG 115 (345)
T ss_dssp HHHHT------------TCTT----------------------------EEEEEEESCHHHHTTTCSEEEECCCCCCCTT
T ss_pred hhhhc------------CccC----------------------------CCcEEEcCChHHHhCCCCEEEECCCCCCCCC
Confidence 01100 0110 014667889999999999999965 32
Q ss_pred -----------hhHHHHHHHHHHHhhccCCCCEEEEEeecCc
Q 012547 171 -----------TETKEVFEEISRYWKERITVPVIISLAKGVE 201 (461)
Q Consensus 171 -----------~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~ 201 (461)
..++++.+.|.++..+ +..|+.++|.+.
T Consensus 116 mtR~DLl~~Na~I~~~~~~~i~~~a~~---~~~vlvvsNPvd 154 (345)
T 4h7p_A 116 MERKDLLEMNARIFKEQGEAIAAVAAS---DCRVVVVGNPAN 154 (345)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHSCT---TCEEEECSSSHH
T ss_pred CCHHHHHHHhHHHHHHHHHHHHhhccC---ceEEEEeCCCcc
Confidence 1355555666666544 567777887754
No 211
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.47 E-value=0.00031 Score=69.37 Aligned_cols=67 Identities=19% Similarity=0.132 Sum_probs=49.4
Q ss_pred cCcccccccchhHHhhHHHHHhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCchhhhh
Q 012547 14 SNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDR 87 (461)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~-~V~l~~r~~~~~~~ 87 (461)
.+|-+..+|-...--+.-|+.. +..+...++|+|||+|.+|.+++..|++. | . +|++|+|+.++++.
T Consensus 113 ~~g~l~g~nTd~~G~~~~l~~~-~~~~l~~~~vlVlGaGg~g~aia~~L~~~-G-----~~~V~v~nR~~~ka~~ 180 (297)
T 2egg_A 113 NDGRLVGYNTDGLGYVQALEEE-MNITLDGKRILVIGAGGGARGIYFSLLST-A-----AERIDMANRTVEKAER 180 (297)
T ss_dssp ETTEEEEECCHHHHHHHHHHHH-TTCCCTTCEEEEECCSHHHHHHHHHHHTT-T-----CSEEEEECSSHHHHHH
T ss_pred cCCeEeeccCCHHHHHHHHHHh-CCCCCCCCEEEEECcHHHHHHHHHHHHHC-C-----CCEEEEEeCCHHHHHH
Confidence 5666666666666555556543 21123447899999999999999999988 8 6 99999999876654
No 212
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=97.44 E-value=0.00048 Score=69.47 Aligned_cols=94 Identities=17% Similarity=0.207 Sum_probs=64.1
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEE-EEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
++||+|||+|.||...+..+.+. . +.+|. +++++++.++.. .. +
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~-~----~~~l~av~d~~~~~~~~a---------~~-------------~-------- 49 (359)
T 3e18_A 5 KYQLVIVGYGGMGSYHVTLASAA-D----NLEVHGVFDILAEKREAA---------AQ-------------K-------- 49 (359)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTS-T----TEEEEEEECSSHHHHHHH---------HT-------------T--------
T ss_pred cCcEEEECcCHHHHHHHHHHHhC-C----CcEEEEEEcCCHHHHHHH---------Hh-------------c--------
Confidence 57999999999999999888765 2 25654 678887643310 00 0
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhc--CCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeec
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~--~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkG 199 (461)
++.+.+|+++.+. +.|+|++|+|+....+++..... . +..| .+-|.
T Consensus 50 -------------------------g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~---a---GkhV-l~EKP 97 (359)
T 3e18_A 50 -------------------------GLKIYESYEAVLADEKVDAVLIATPNDSHKELAISALE---A---GKHV-VCEKP 97 (359)
T ss_dssp -------------------------TCCBCSCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHH---T---TCEE-EEESS
T ss_pred -------------------------CCceeCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHH---C---CCCE-EeeCC
Confidence 2234577888776 78999999999888777765543 3 3444 47777
Q ss_pred Cccc
Q 012547 200 VEAE 203 (461)
Q Consensus 200 i~~~ 203 (461)
+...
T Consensus 98 ~a~~ 101 (359)
T 3e18_A 98 VTMT 101 (359)
T ss_dssp CCSS
T ss_pred CcCC
Confidence 6553
No 213
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=97.43 E-value=0.0007 Score=67.56 Aligned_cols=97 Identities=14% Similarity=0.115 Sum_probs=64.7
Q ss_pred CCceEEEECccHHHHH-HHHHHHHhcCCCCCCeeEE-EEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhh
Q 012547 42 DPLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (461)
Q Consensus 42 ~~mkI~IIGaGamG~a-lA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (461)
.|+||+|||+|.||.. ++..+... . +.+|. ++++++++++++.++ | .
T Consensus 22 ~mirigiIG~G~ig~~~~~~~~~~~-~----~~~lvav~d~~~~~a~~~a~~---------------------~-g---- 70 (350)
T 4had_A 22 SMLRFGIISTAKIGRDNVVPAIQDA-E----NCVVTAIASRDLTRAREMADR---------------------F-S---- 70 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHC-S----SEEEEEEECSSHHHHHHHHHH---------------------H-T----
T ss_pred CccEEEEEcChHHHHHHHHHHHHhC-C----CeEEEEEECCCHHHHHHHHHH---------------------c-C----
Confidence 4589999999999975 45566654 2 25554 788888766542110 0 0
Q ss_pred hccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhc--CCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEe
Q 012547 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (461)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~--~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~t 197 (461)
-.++.+|+++.+. +.|+|++|+|+....+++..... . +.. |.|-
T Consensus 71 ---------------------------~~~~y~d~~ell~~~~iDaV~I~tP~~~H~~~~~~al~---a---Gkh-Vl~E 116 (350)
T 4had_A 71 ---------------------------VPHAFGSYEEMLASDVIDAVYIPLPTSQHIEWSIKAAD---A---GKH-VVCE 116 (350)
T ss_dssp ---------------------------CSEEESSHHHHHHCSSCSEEEECSCGGGHHHHHHHHHH---T---TCE-EEEC
T ss_pred ---------------------------CCeeeCCHHHHhcCCCCCEEEEeCCCchhHHHHHHHHh---c---CCE-EEEe
Confidence 0145678888774 47999999999988887766543 2 333 4578
Q ss_pred ecCccc
Q 012547 198 KGVEAE 203 (461)
Q Consensus 198 kGi~~~ 203 (461)
|-+...
T Consensus 117 KPla~~ 122 (350)
T 4had_A 117 KPLALK 122 (350)
T ss_dssp SCCCSS
T ss_pred CCcccc
Confidence 887654
No 214
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=97.41 E-value=0.00053 Score=69.18 Aligned_cols=96 Identities=16% Similarity=0.068 Sum_probs=65.0
Q ss_pred CceEEEECccHHHHH-HHHHHHHhcCCCCCCeeEE-EEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 43 PLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 43 ~mkI~IIGaGamG~a-lA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
++||+|||+|.||.. ++..|.+..+ .+|. +++++++.++.+.+ .++
T Consensus 5 ~~rigiIG~G~~g~~~~~~~l~~~~~-----~~l~av~d~~~~~~~~~a~----------------------~~~----- 52 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLLQMQD-----IRIVAACDSDLERARRVHR----------------------FIS----- 52 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTCTT-----EEEEEEECSSHHHHGGGGG----------------------TSC-----
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCC-----cEEEEEEcCCHHHHHHHHH----------------------hcC-----
Confidence 479999999999984 7888876412 6655 88998876543110 000
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcC--CCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEee
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD--ADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~--aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tk 198 (461)
...+.+|+++.+.+ .|+|++|+|+....+++.... .. +.. |.+-|
T Consensus 53 --------------------------~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al---~a---Gkh-Vl~EK 99 (359)
T 3m2t_A 53 --------------------------DIPVLDNVPAMLNQVPLDAVVMAGPPQLHFEMGLLAM---SK---GVN-VFVEK 99 (359)
T ss_dssp --------------------------SCCEESSHHHHHHHSCCSEEEECSCHHHHHHHHHHHH---HT---TCE-EEECS
T ss_pred --------------------------CCcccCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHH---HC---CCe-EEEEC
Confidence 23456788888764 599999999998887776654 33 334 44677
Q ss_pred cCccc
Q 012547 199 GVEAE 203 (461)
Q Consensus 199 Gi~~~ 203 (461)
.+...
T Consensus 100 Pla~~ 104 (359)
T 3m2t_A 100 PPCAT 104 (359)
T ss_dssp CSCSS
T ss_pred CCcCC
Confidence 76543
No 215
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.36 E-value=0.00053 Score=69.81 Aligned_cols=94 Identities=19% Similarity=0.154 Sum_probs=63.7
Q ss_pred CceEEEECcc-HHHHHHHHHHHHhcCCCCCCeeE-EEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 43 PLRIVGVGAG-AWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 43 ~mkI~IIGaG-amG~alA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
++||+|||+| .||..++..+... . +.++ .+++++++.++.+.++ |
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~-~----~~~l~av~d~~~~~~~~~a~~---------------------~------- 48 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHH-P----DAQIVAACDPNEDVRERFGKE---------------------Y------- 48 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHC-T----TEEEEEEECSCHHHHHHHHHH---------------------H-------
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhC-C----CeEEEEEEeCCHHHHHHHHHH---------------------c-------
Confidence 5899999999 9999999988865 2 1454 4788887655431100 0
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhc--CCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEee
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~--~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tk 198 (461)
++...+|+++.+. +.|+|++|+|+....+++..... . +..| .+-|
T Consensus 49 --------------------------g~~~~~~~~ell~~~~vD~V~i~tp~~~H~~~~~~al~---a---Gk~V-l~EK 95 (387)
T 3moi_A 49 --------------------------GIPVFATLAEMMQHVQMDAVYIASPHQFHCEHVVQASE---Q---GLHI-IVEK 95 (387)
T ss_dssp --------------------------TCCEESSHHHHHHHSCCSEEEECSCGGGHHHHHHHHHH---T---TCEE-EECS
T ss_pred --------------------------CCCeECCHHHHHcCCCCCEEEEcCCcHHHHHHHHHHHH---C---CCce-eeeC
Confidence 1234578888776 48999999999888777665543 3 3333 4667
Q ss_pred cCcc
Q 012547 199 GVEA 202 (461)
Q Consensus 199 Gi~~ 202 (461)
-+..
T Consensus 96 P~a~ 99 (387)
T 3moi_A 96 PLTL 99 (387)
T ss_dssp CCCS
T ss_pred CccC
Confidence 6654
No 216
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.34 E-value=0.00091 Score=67.56 Aligned_cols=94 Identities=18% Similarity=0.276 Sum_probs=62.3
Q ss_pred CCceEEEECccHHHHH-HHHHHHHhcCCCCCCeeEE-EEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhh
Q 012547 42 DPLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (461)
Q Consensus 42 ~~mkI~IIGaGamG~a-lA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (461)
+++||+|||+|.||.. .+..+....+ .+|. +++++++++.+ . .+
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~l~~~~~-----~~l~av~d~~~~~~~~------------------------~-~~---- 51 (364)
T 3e82_A 6 NTINIALIGYGFVGKTFHAPLIRSVPG-----LNLAFVASRDEEKVKR------------------------D-LP---- 51 (364)
T ss_dssp -CEEEEEECCSHHHHHTHHHHHHTSTT-----EEEEEEECSCHHHHHH------------------------H-CT----
T ss_pred CcceEEEECCCHHHHHHHHHHHhhCCC-----eEEEEEEcCCHHHHHh------------------------h-CC----
Confidence 5689999999999986 5666654312 5654 77887653321 0 01
Q ss_pred hccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhc--CCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEe
Q 012547 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (461)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~--~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~t 197 (461)
...+.+|+++.+. +.|+|++|+|+....+++.... .. +..| .+-
T Consensus 52 ---------------------------~~~~~~~~~~ll~~~~~D~V~i~tp~~~H~~~~~~al---~a---Gk~V-l~E 97 (364)
T 3e82_A 52 ---------------------------DVTVIASPEAAVQHPDVDLVVIASPNATHAPLARLAL---NA---GKHV-VVD 97 (364)
T ss_dssp ---------------------------TSEEESCHHHHHTCTTCSEEEECSCGGGHHHHHHHHH---HT---TCEE-EEC
T ss_pred ---------------------------CCcEECCHHHHhcCCCCCEEEEeCChHHHHHHHHHHH---HC---CCcE-EEe
Confidence 2356688888877 6899999999988877766543 33 3444 467
Q ss_pred ecCccc
Q 012547 198 KGVEAE 203 (461)
Q Consensus 198 kGi~~~ 203 (461)
|-+...
T Consensus 98 KPla~~ 103 (364)
T 3e82_A 98 KPFTLD 103 (364)
T ss_dssp SCSCSS
T ss_pred CCCcCC
Confidence 766543
No 217
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=97.33 E-value=0.00043 Score=65.28 Aligned_cols=97 Identities=16% Similarity=0.158 Sum_probs=65.2
Q ss_pred hHHhhHHHHHhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCee-EEEEecCchhhhhhhhhhHHHHHhhhhhh
Q 012547 25 LEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDV 103 (461)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~-V~l~~r~~~~~~~~~~~~l~~~i~~~~~~ 103 (461)
+++-++++++.+|.. +.+||+|||+|.+|.+++..+....| .+ |-++|.++++...
T Consensus 64 v~~L~~~~~~~lg~~--~~~rV~IIGaG~~G~~la~~~~~~~g-----~~iVg~~D~dp~k~g~---------------- 120 (211)
T 2dt5_A 64 VPVLKRELRHILGLN--RKWGLCIVGMGRLGSALADYPGFGES-----FELRGFFDVDPEKVGR---------------- 120 (211)
T ss_dssp HHHHHHHHHHHHTTT--SCEEEEEECCSHHHHHHHHCSCCCSS-----EEEEEEEESCTTTTTC----------------
T ss_pred hHHHHHHHHHHhCcC--CCCEEEEECccHHHHHHHHhHhhcCC-----cEEEEEEeCCHHHHhh----------------
Confidence 455567778888753 35799999999999999986322103 44 5567777653321
Q ss_pred HHhhhhcccccchhhhhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhc-CCCEEEEcCCchhHHHHHHHHHH
Q 012547 104 LRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW-DADIVINGLPSTETKEVFEEISR 182 (461)
Q Consensus 104 ~~~~~~n~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~-~aDiIIiaVps~~~~~vl~~i~~ 182 (461)
...++ ++...+|+++.++ +.|.|++|+|+....++++.+..
T Consensus 121 ---------~i~gv-----------------------------~V~~~~dl~ell~~~ID~ViIA~Ps~~~~ei~~~l~~ 162 (211)
T 2dt5_A 121 ---------PVRGG-----------------------------VIEHVDLLPQRVPGRIEIALLTVPREAAQKAADLLVA 162 (211)
T ss_dssp ---------EETTE-----------------------------EEEEGGGHHHHSTTTCCEEEECSCHHHHHHHHHHHHH
T ss_pred ---------hhcCC-----------------------------eeecHHhHHHHHHcCCCEEEEeCCchhHHHHHHHHHH
Confidence 11110 2334577877765 58999999999988888877754
No 218
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=97.32 E-value=0.00095 Score=66.03 Aligned_cols=38 Identities=13% Similarity=0.035 Sum_probs=31.0
Q ss_pred ceEEEEC-ccHHHHHHHHHHHHhcCCCCCCeeEEEEec--Cchhh
Q 012547 44 LRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRR--PGRSV 85 (461)
Q Consensus 44 mkI~IIG-aGamG~alA~~La~~~G~~~~~~~V~l~~r--~~~~~ 85 (461)
|||+|+| +|.+|++++..|+.. |.. .++.++++ +++++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~-~~~---~el~L~Di~~~~~~~ 41 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALR-DIA---DEVVFVDIPDKEDDT 41 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCC---SEEEEECCGGGHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHhC-CCC---CEEEEEcCCCChhhH
Confidence 7999999 999999999999887 621 37999998 65443
No 219
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=97.31 E-value=0.0012 Score=64.97 Aligned_cols=95 Identities=17% Similarity=0.182 Sum_probs=67.2
Q ss_pred CCCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhh
Q 012547 41 GDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (461)
Q Consensus 41 ~~~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (461)
.+.+||+|+|+ |.||...+..+.+. | .+ .++..++..... . .
T Consensus 5 ~~~~rVaViG~sG~~G~~~~~~l~~~-g-----~~-~V~~V~p~~~g~------------------------~-~----- 47 (288)
T 2nu8_A 5 DKNTKVICQGFTGSQGTFHSEQAIAY-G-----TK-MVGGVTPGKGGT------------------------T-H----- 47 (288)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHH-T-----CE-EEEEECTTCTTC------------------------E-E-----
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC-C-----Ce-EEEEeCCCcccc------------------------e-e-----
Confidence 45689999998 99999999999887 7 56 344544421100 0 0
Q ss_pred hccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhc--CCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEe
Q 012547 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (461)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~--~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~t 197 (461)
.++.+..+++++.. ++|+++++||+....+++++.... . -..+|.++
T Consensus 48 --------------------------~G~~vy~sl~el~~~~~~D~viI~tP~~~~~~~~~ea~~~-G----i~~iVi~t 96 (288)
T 2nu8_A 48 --------------------------LGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDA-G----IKLIITIT 96 (288)
T ss_dssp --------------------------TTEEEESSHHHHHHHHCCCEEEECCCGGGHHHHHHHHHHT-T----CSEEEECC
T ss_pred --------------------------CCeeccCCHHHHhhcCCCCEEEEecCHHHHHHHHHHHHHC-C----CCEEEEEC
Confidence 03455677888777 899999999999999999887652 1 23456678
Q ss_pred ecCccc
Q 012547 198 KGVEAE 203 (461)
Q Consensus 198 kGi~~~ 203 (461)
.|+..+
T Consensus 97 ~G~~~~ 102 (288)
T 2nu8_A 97 EGIPTL 102 (288)
T ss_dssp CCCCHH
T ss_pred CCCCHH
Confidence 788654
No 220
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=97.30 E-value=0.00032 Score=69.99 Aligned_cols=93 Identities=18% Similarity=0.197 Sum_probs=60.9
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
+..+|+|||+|.+|...+..|....+ ..+|.+|+|+ +++++.+ .+... + +
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~----~~~V~v~~r~--~a~~la~-----~l~~~------------~--g----- 169 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFA----LEAILVHDPY--ASPEILE-----RIGRR------------C--G----- 169 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSC----CCEEEEECTT--CCHHHHH-----HHHHH------------H--T-----
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCC----CcEEEEECCc--HHHHHHH-----HHHHh------------c--C-----
Confidence 45789999999999999999886412 2689999999 4443211 11100 0 0
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEE
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISL 196 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~ 196 (461)
..+... |+++++.+||+||.|||+.. .++. .+++++ +++|+.+
T Consensus 170 ------------------------~~~~~~-~~~eav~~aDIVi~aT~s~~--pvl~--~~~l~~---G~~V~~v 212 (313)
T 3hdj_A 170 ------------------------VPARMA-APADIAAQADIVVTATRSTT--PLFA--GQALRA---GAFVGAI 212 (313)
T ss_dssp ------------------------SCEEEC-CHHHHHHHCSEEEECCCCSS--CSSC--GGGCCT---TCEEEEC
T ss_pred ------------------------CeEEEe-CHHHHHhhCCEEEEccCCCC--cccC--HHHcCC---CcEEEEC
Confidence 024455 89999999999999999852 2222 234565 5655543
No 221
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=97.30 E-value=0.0012 Score=65.99 Aligned_cols=101 Identities=16% Similarity=0.093 Sum_probs=66.4
Q ss_pred CCCCCceEEEECcc-HHHHHHHHHHHHhcCCCCCCeeE-EEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccch
Q 012547 39 AEGDPLRIVGVGAG-AWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKY 116 (461)
Q Consensus 39 ~~~~~mkI~IIGaG-amG~alA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~ 116 (461)
-..+++||+|||+| .||...+..+.+. + ++.++ .+++++++.++++.++ | .
T Consensus 14 ~~~~~irvgiIG~G~~~g~~~~~~l~~~-~---~~~~lvav~d~~~~~~~~~a~~---------------------~-~- 66 (340)
T 1zh8_A 14 KPLRKIRLGIVGCGIAARELHLPALKNL-S---HLFEITAVTSRTRSHAEEFAKM---------------------V-G- 66 (340)
T ss_dssp --CCCEEEEEECCSHHHHHTHHHHHHTT-T---TTEEEEEEECSSHHHHHHHHHH---------------------H-S-
T ss_pred CCCCceeEEEEecCHHHHHHHHHHHHhC-C---CceEEEEEEcCCHHHHHHHHHH---------------------h-C-
Confidence 34467899999999 8999998888754 2 01454 5788887765431110 0 0
Q ss_pred hhhhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhc--CCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEE
Q 012547 117 VEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVII 194 (461)
Q Consensus 117 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~--~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iII 194 (461)
...+.+|+++.+. +.|+|++|+|+....+++.... .. +.. |
T Consensus 67 ------------------------------~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al---~a---Gkh-V 109 (340)
T 1zh8_A 67 ------------------------------NPAVFDSYEELLESGLVDAVDLTLPVELNLPFIEKAL---RK---GVH-V 109 (340)
T ss_dssp ------------------------------SCEEESCHHHHHHSSCCSEEEECCCGGGHHHHHHHHH---HT---TCE-E
T ss_pred ------------------------------CCcccCCHHHHhcCCCCCEEEEeCCchHHHHHHHHHH---HC---CCc-E
Confidence 1245678888775 5899999999988877776544 33 343 3
Q ss_pred EEeecCccc
Q 012547 195 SLAKGVEAE 203 (461)
Q Consensus 195 s~tkGi~~~ 203 (461)
.+-|-+...
T Consensus 110 l~EKPla~~ 118 (340)
T 1zh8_A 110 ICEKPISTD 118 (340)
T ss_dssp EEESSSSSS
T ss_pred EEeCCCCCC
Confidence 467776543
No 222
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.29 E-value=0.00057 Score=70.89 Aligned_cols=100 Identities=13% Similarity=0.054 Sum_probs=63.9
Q ss_pred CCceEEEECccHHHH-HHHHHHHHhcCCCCCCeeE-EEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhh
Q 012547 42 DPLRIVGVGAGAWGS-VFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (461)
Q Consensus 42 ~~mkI~IIGaGamG~-alA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (461)
+++||+|||+|.||. .++..|.+. + +.++ .+++++++.++.+.+ ..+ .+.
T Consensus 82 ~~irigiIG~G~~g~~~~~~~l~~~-~----~~~lvav~d~~~~~~~~~a~--------~~g------------~~~--- 133 (433)
T 1h6d_A 82 RRFGYAIVGLGKYALNQILPGFAGC-Q----HSRIEALVSGNAEKAKIVAA--------EYG------------VDP--- 133 (433)
T ss_dssp CCEEEEEECCSHHHHHTHHHHTTTC-S----SEEEEEEECSCHHHHHHHHH--------HTT------------CCG---
T ss_pred CceEEEEECCcHHHHHHHHHHHhhC-C----CcEEEEEEcCCHHHHHHHHH--------HhC------------CCc---
Confidence 458999999999997 888888754 2 2554 588888765543111 000 000
Q ss_pred hccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhc--CCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEe
Q 012547 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (461)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~--~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~t 197 (461)
..+...+|+++.+. +.|+|++|+|+....+++.... .. +..|+ +-
T Consensus 134 --------------------------~~~~~~~~~~~ll~~~~vD~V~iatp~~~h~~~~~~al---~a---Gk~Vl-~E 180 (433)
T 1h6d_A 134 --------------------------RKIYDYSNFDKIAKDPKIDAVYIILPNSLHAEFAIRAF---KA---GKHVM-CE 180 (433)
T ss_dssp --------------------------GGEECSSSGGGGGGCTTCCEEEECSCGGGHHHHHHHHH---HT---TCEEE-EC
T ss_pred --------------------------ccccccCCHHHHhcCCCCCEEEEcCCchhHHHHHHHHH---HC---CCcEE-Ec
Confidence 01334567777765 6899999999998887776653 33 34443 56
Q ss_pred ecCcc
Q 012547 198 KGVEA 202 (461)
Q Consensus 198 kGi~~ 202 (461)
|.+..
T Consensus 181 KPla~ 185 (433)
T 1h6d_A 181 KPMAT 185 (433)
T ss_dssp SSCCS
T ss_pred CCCCC
Confidence 65543
No 223
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.29 E-value=0.00068 Score=67.80 Aligned_cols=95 Identities=12% Similarity=0.141 Sum_probs=61.5
Q ss_pred CceEEEECccHHHHHHHHH-H-HHhcCCCCCCeeEE-EEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhh
Q 012547 43 PLRIVGVGAGAWGSVFTAM-L-QDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~-L-a~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (461)
++||+|||+|.||..+... + ....+ .+|. +++++++..+. ...
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~~~~-----~~l~av~d~~~~~~~~--------------------------~~~--- 47 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNRKDS-----WHVAHIFRRHAKPEEQ--------------------------API--- 47 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTCTTT-----EEEEEEECSSCCGGGG--------------------------SGG---
T ss_pred ceEEEEEecCHHHHHHHHHHHHhcCCC-----eEEEEEEcCCHhHHHH--------------------------HHh---
Confidence 5799999999999864333 3 33213 6665 88888764321 000
Q ss_pred hccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcC--CCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEe
Q 012547 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD--ADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (461)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~--aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~t 197 (461)
. ..+.+.+|+++.+.+ .|+|++|+|+....+++.... .. +..| .+-
T Consensus 48 ------~-------------------~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al---~a---Gk~V-l~E 95 (345)
T 3f4l_A 48 ------Y-------------------SHIHFTSDLDEVLNDPDVKLVVVCTHADSHFEYAKRAL---EA---GKNV-LVE 95 (345)
T ss_dssp ------G-------------------TTCEEESCTHHHHTCTTEEEEEECSCGGGHHHHHHHHH---HT---TCEE-EEC
T ss_pred ------c-------------------CCCceECCHHHHhcCCCCCEEEEcCChHHHHHHHHHHH---Hc---CCcE-EEe
Confidence 0 034566888888775 899999999988877766544 33 3444 467
Q ss_pred ecCccc
Q 012547 198 KGVEAE 203 (461)
Q Consensus 198 kGi~~~ 203 (461)
|-+...
T Consensus 96 KP~a~~ 101 (345)
T 3f4l_A 96 KPFTPT 101 (345)
T ss_dssp SSSCSS
T ss_pred CCCCCC
Confidence 766543
No 224
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=97.27 E-value=0.0006 Score=64.33 Aligned_cols=99 Identities=14% Similarity=0.239 Sum_probs=66.9
Q ss_pred hhHHhhHHHHHhhcCCCCCCceEEEECccHHHHHHHHHHH--HhcCCCCCCee-EEEEecCch-hhhhhhhhhHHHHHhh
Q 012547 24 SLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQ--DSYGYLRDKVL-IRIWRRPGR-SVDRATAEHLFEVINS 99 (461)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La--~~~G~~~~~~~-V~l~~r~~~-~~~~~~~~~l~~~i~~ 99 (461)
..++-+++++..+|.. +..+|+|+|+|+.|.+++..+. .. | .+ |-++|.+++ ....
T Consensus 67 ~V~~L~~~i~~~Lg~~--~~~~V~IvGaG~lG~aLa~~~~~~~~-g-----~~iVg~~D~dp~~kiG~------------ 126 (212)
T 3keo_A 67 DVKKLMNFFAEILNDH--STTNVMLVGCGNIGRALLHYRFHDRN-K-----MQISMAFDLDSNDLVGK------------ 126 (212)
T ss_dssp EHHHHHHHHHHHTTTT--SCEEEEEECCSHHHHHHTTCCCCTTS-S-----EEEEEEEECTTSTTTTC------------
T ss_pred EHHHHHHHHHHHhCCC--CCCEEEEECcCHHHHHHHHhhhcccC-C-----eEEEEEEeCCchhccCc------------
Confidence 4567778889988644 3468999999999999998742 23 3 44 446777764 3210
Q ss_pred hhhhHHhhhhcccccchhhhhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhc--CCCEEEEcCCchhHHHHH
Q 012547 100 REDVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVF 177 (461)
Q Consensus 100 ~~~~~~~~~~n~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~--~aDiIIiaVps~~~~~vl 177 (461)
....++ ++...+++++.++ +.|.+|+|+|+...++++
T Consensus 127 ------------~~i~Gv-----------------------------pV~~~~dL~~~v~~~~Id~vIIAvPs~~aq~v~ 165 (212)
T 3keo_A 127 ------------TTEDGI-----------------------------PVYGISTINDHLIDSDIETAILTVPSTEAQEVA 165 (212)
T ss_dssp ------------BCTTCC-----------------------------BEEEGGGHHHHC-CCSCCEEEECSCGGGHHHHH
T ss_pred ------------eeECCe-----------------------------EEeCHHHHHHHHHHcCCCEEEEecCchhHHHHH
Confidence 011111 2344567777765 489999999999888888
Q ss_pred HHHHHH
Q 012547 178 EEISRY 183 (461)
Q Consensus 178 ~~i~~~ 183 (461)
+.+...
T Consensus 166 d~lv~~ 171 (212)
T 3keo_A 166 DILVKA 171 (212)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 887753
No 225
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=97.27 E-value=0.0011 Score=65.94 Aligned_cols=94 Identities=11% Similarity=0.120 Sum_probs=62.8
Q ss_pred CceEEEECccHHHH-HHHHHHHHhcCCCCCCee-EEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 43 PLRIVGVGAGAWGS-VFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 43 ~mkI~IIGaGamG~-alA~~La~~~G~~~~~~~-V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
++||+|||+|.+|. .++..|... + .+ |.++++++++++.+.++ | +
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~~-~-----~~lvav~d~~~~~~~~~a~~---------------------~-~----- 50 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLIDA-G-----AELAGVFESDSDNRAKFTSL---------------------F-P----- 50 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHHT-T-----CEEEEEECSCTTSCHHHHHH---------------------S-T-----
T ss_pred ccEEEEECCChHHHHHhhhhhcCC-C-----cEEEEEeCCCHHHHHHHHHh---------------------c-C-----
Confidence 58999999999996 577767655 5 66 46899998766532110 1 1
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhc--CCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEee
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~--~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tk 198 (461)
...+.+|+++.+. +.|+|++|+|+....+++.... .. +..|+ +-|
T Consensus 51 --------------------------~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al---~a---GkhVl-~EK 97 (336)
T 2p2s_A 51 --------------------------SVPFAASAEQLITDASIDLIACAVIPCDRAELALRTL---DA---GKDFF-TAK 97 (336)
T ss_dssp --------------------------TCCBCSCHHHHHTCTTCCEEEECSCGGGHHHHHHHHH---HT---TCEEE-ECS
T ss_pred --------------------------CCcccCCHHHHhhCCCCCEEEEeCChhhHHHHHHHHH---HC---CCcEE-EeC
Confidence 1234577888776 5899999999988877766543 33 34443 567
Q ss_pred cCcc
Q 012547 199 GVEA 202 (461)
Q Consensus 199 Gi~~ 202 (461)
-+..
T Consensus 98 P~a~ 101 (336)
T 2p2s_A 98 PPLT 101 (336)
T ss_dssp SCCS
T ss_pred CCCC
Confidence 6554
No 226
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.26 E-value=0.00055 Score=68.39 Aligned_cols=42 Identities=7% Similarity=0.107 Sum_probs=34.6
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (461)
+.++|+|||+|.+|..++..|....+ ..+|.+|+|+++++++
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~----~~~V~v~~r~~~~a~~ 165 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFD----IGEVKAYDVREKAAKK 165 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSC----CCEEEEECSSHHHHHH
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCC----ccEEEEECCCHHHHHH
Confidence 45799999999999999999887412 1689999999887664
No 227
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=97.22 E-value=0.0016 Score=67.67 Aligned_cols=119 Identities=26% Similarity=0.380 Sum_probs=80.5
Q ss_pred hhHHhhHHHHH--hhcCCC-------CCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHH
Q 012547 24 SLEERLDELRR--LMGKAE-------GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLF 94 (461)
Q Consensus 24 ~~~~~~~~~~~--~~~~~~-------~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~ 94 (461)
++.+.|++|+. .|...+ -+.++|+|||.|+-|.+=|..|.++ | .+|.+--|.....+.
T Consensus 9 ~~~~~~~~~~~c~~m~~~eF~~~~~~lkgK~IaVIGyGsQG~AqAlNLRDS-G-----v~V~Vglr~~s~~e~------- 75 (491)
T 3ulk_A 9 NLRQQLAQLGKCRFMGRDEFADGASYLQGKKVVIVGCGAQGLNQGLNMRDS-G-----LDISYALRKEAIAEK------- 75 (491)
T ss_dssp CHHHHHHHHTCCEECCGGGGTTTTGGGTTSEEEEESCSHHHHHHHHHHHHT-T-----CEEEEEECHHHHHTT-------
T ss_pred cHHHHHHHhccceeccHHHhcchhHHHcCCEEEEeCCChHhHHHHhHHHhc-C-----CcEEEEeCCCCcccc-------
Confidence 56677877743 232111 0127999999999999999999999 8 899887774321110
Q ss_pred HHHhhhhhhHHhhhhcccccchhhhhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHH
Q 012547 95 EVINSREDVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETK 174 (461)
Q Consensus 95 ~~i~~~~~~~~~~~~n~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~ 174 (461)
.. .+-.. ..+ +..+ .+.++|++.||+|++-+|.....
T Consensus 76 -----~~----------S~~~A---------------~~~------------Gf~v-~~~~eA~~~ADvV~~L~PD~~q~ 112 (491)
T 3ulk_A 76 -----RA----------SWRKA---------------TEN------------GFKV-GTYEELIPQADLVINLTPDKQHS 112 (491)
T ss_dssp -----CH----------HHHHH---------------HHT------------TCEE-EEHHHHGGGCSEEEECSCGGGHH
T ss_pred -----cc----------hHHHH---------------HHC------------CCEe-cCHHHHHHhCCEEEEeCChhhHH
Confidence 00 00000 012 2333 34788999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCEEEEEeecCcc
Q 012547 175 EVFEEISRYWKERITVPVIISLAKGVEA 202 (461)
Q Consensus 175 ~vl~~i~~~l~~~~~~~iIIs~tkGi~~ 202 (461)
++.++|.|++++ ++.+ ..+-|+..
T Consensus 113 ~vy~~I~p~lk~---G~~L-~faHGFnI 136 (491)
T 3ulk_A 113 DVVRTVQPLMKD---GAAL-GYSHGFNI 136 (491)
T ss_dssp HHHHHHGGGSCT---TCEE-EESSCHHH
T ss_pred HHHHHHHhhCCC---CCEE-EecCcccc
Confidence 999999999998 5544 46667643
No 228
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=97.22 E-value=0.0033 Score=62.65 Aligned_cols=36 Identities=14% Similarity=0.327 Sum_probs=29.7
Q ss_pred ceEEEEC-ccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 44 LRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 44 mkI~IIG-aGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
|||+||| +|.+|.+++..|+...+ + ..++.++++++
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~-~--~~el~L~Di~~ 37 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLP-S--GSELSLYDIAP 37 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSC-T--TEEEEEECSST
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-C--CceEEEEecCC
Confidence 7999999 89999999999986411 1 16899999986
No 229
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.21 E-value=0.001 Score=65.73 Aligned_cols=38 Identities=26% Similarity=0.267 Sum_probs=27.7
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEE-EEecCchh
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRS 84 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~-l~~r~~~~ 84 (461)
+++||+|||+|.||..++..+.+..+ .++. +++++++.
T Consensus 8 ~~irv~IIG~G~iG~~~~~~l~~~~~-----~elvav~d~~~~~ 46 (304)
T 3bio_A 8 KKIRAAIVGYGNIGRYALQALREAPD-----FEIAGIVRRNPAE 46 (304)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCTT-----EEEEEEECC----
T ss_pred CCCEEEEECChHHHHHHHHHHhcCCC-----CEEEEEEcCCHHH
Confidence 35899999999999999999887513 6766 78888754
No 230
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.21 E-value=0.0016 Score=65.29 Aligned_cols=94 Identities=12% Similarity=0.157 Sum_probs=62.6
Q ss_pred CCceEEEECccHHHHH-HHHHHHHhcCCCCCCeeEE-EEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhh
Q 012547 42 DPLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (461)
Q Consensus 42 ~~mkI~IIGaGamG~a-lA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (461)
+++||+|||+|.||.. .+..+... . +.+|. +++++++++++ .+ +
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~~~~~-~----~~~l~av~d~~~~~~~~------------------------~~-~---- 51 (352)
T 3kux_A 6 DKIKVGLLGYGYASKTFHAPLIMGT-P----GLELAGVSSSDASKVHA------------------------DW-P---- 51 (352)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTS-T----TEEEEEEECSCHHHHHT------------------------TC-S----
T ss_pred CCceEEEECCCHHHHHHHHHHHhhC-C----CcEEEEEECCCHHHHHh------------------------hC-C----
Confidence 4689999999999986 66666654 2 15654 77887654321 01 1
Q ss_pred hccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcC--CCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEe
Q 012547 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD--ADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (461)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~--aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~t 197 (461)
...+.+|+++.+.+ .|+|++|+|+....+++.... .. +..| .+-
T Consensus 52 ---------------------------~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al---~a---GkhV-~~E 97 (352)
T 3kux_A 52 ---------------------------AIPVVSDPQMLFNDPSIDLIVIPTPNDTHFPLAQSAL---AA---GKHV-VVD 97 (352)
T ss_dssp ---------------------------SCCEESCHHHHHHCSSCCEEEECSCTTTHHHHHHHHH---HT---TCEE-EEC
T ss_pred ---------------------------CCceECCHHHHhcCCCCCEEEEeCChHHHHHHHHHHH---HC---CCcE-EEE
Confidence 23456788888765 899999999988877766544 33 3444 467
Q ss_pred ecCccc
Q 012547 198 KGVEAE 203 (461)
Q Consensus 198 kGi~~~ 203 (461)
|.+...
T Consensus 98 KPla~~ 103 (352)
T 3kux_A 98 KPFTVT 103 (352)
T ss_dssp SSCCSC
T ss_pred CCCcCC
Confidence 776543
No 231
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=97.20 E-value=0.00034 Score=68.65 Aligned_cols=64 Identities=14% Similarity=0.068 Sum_probs=44.9
Q ss_pred CcccccccchhHHhhHHHHHhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCchhhh
Q 012547 15 NGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVD 86 (461)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~-~V~l~~r~~~~~~ 86 (461)
+|-++-.|-.-.-=+.-|+..- .+...+++.|+|+|.+|.+++..|++. | . +|++++|+.++++
T Consensus 91 ~g~l~G~NTD~~G~~~~L~~~~--~~l~~k~vlvlGaGg~g~aia~~L~~~-G-----~~~v~v~~R~~~~a~ 155 (277)
T 3don_A 91 DGKWIGYNTDGIGYVNGLKQIY--EGIEDAYILILGAGGASKGIANELYKI-V-----RPTLTVANRTMSRFN 155 (277)
T ss_dssp TTEEEEECCHHHHHHHHHHHHS--TTGGGCCEEEECCSHHHHHHHHHHHTT-C-----CSCCEEECSCGGGGT
T ss_pred CCEEEEECChHHHHHHHHHHhC--CCcCCCEEEEECCcHHHHHHHHHHHHC-C-----CCEEEEEeCCHHHHH
Confidence 5655555544443344444422 122346899999999999999999998 8 6 8999999987654
No 232
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.18 E-value=0.00054 Score=71.85 Aligned_cols=92 Identities=22% Similarity=0.261 Sum_probs=63.1
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
..|||.|+|+|.+|..+|..|... | |+|++++++++.++.+..+ + . ...+ .
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~-~-----~~v~vId~d~~~~~~~~~~-----~--------------~-~~~i---~ 52 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGE-N-----NDITIVDKDGDRLRELQDK-----Y--------------D-LRVV---N 52 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCST-T-----EEEEEEESCHHHHHHHHHH-----S--------------S-CEEE---E
T ss_pred CcCEEEEECCCHHHHHHHHHHHHC-C-----CCEEEEECCHHHHHHHHHh-----c--------------C-cEEE---E
Confidence 469999999999999999999988 7 9999999999877642211 0 0 0111 0
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHH-hcCCCEEEEcCCchhHHHHHHHHHHHhhc
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEA-VWDADIVINGLPSTETKEVFEEISRYWKE 186 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~a-v~~aDiIIiaVps~~~~~vl~~i~~~l~~ 186 (461)
+| . .-.+-+++| +++||++|.++.++...-+.-.++..+.+
T Consensus 53 Gd-----------------------~-~~~~~L~~Agi~~ad~~ia~t~~De~Nl~~~~~Ak~~~~ 94 (461)
T 4g65_A 53 GH-----------------------A-SHPDVLHEAGAQDADMLVAVTNTDETNMAACQVAFTLFN 94 (461)
T ss_dssp SC-----------------------T-TCHHHHHHHTTTTCSEEEECCSCHHHHHHHHHHHHHHHC
T ss_pred Ec-----------------------C-CCHHHHHhcCCCcCCEEEEEcCChHHHHHHHHHHHHhcC
Confidence 11 0 001123444 78999999999998877777777765543
No 233
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=97.18 E-value=0.00095 Score=65.24 Aligned_cols=150 Identities=18% Similarity=0.108 Sum_probs=85.8
Q ss_pred CCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEE-EEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhh
Q 012547 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIR-IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (461)
Q Consensus 42 ~~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~-l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (461)
++|||+|+|+ |.||..++..+....| +++. +++++.+.... . ....+.++.
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~-----~elva~~d~~~~~~~g-----------~----------d~~~~~g~~- 56 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEG-----VQLGAALEREGSSLLG-----------S----------DAGELAGAG- 56 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTT-----EECCCEECCTTCTTCS-----------C----------CTTCSSSSS-
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCC-----CEEEEEEecCchhhhh-----------h----------hHHHHcCCC-
Confidence 4589999998 9999999998875424 7766 66766532100 0 000000000
Q ss_pred hccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeec
Q 012547 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (461)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkG 199 (461)
...+..++|+++++.++|+||-++++....+.+.... .. +..+|+.+.|
T Consensus 57 -------------------------~~~v~~~~dl~~~l~~~DvVIDft~p~~~~~~~~~a~---~~---G~~vVigTtG 105 (273)
T 1dih_A 57 -------------------------KTGVTVQSSLDAVKDDFDVFIDFTRPEGTLNHLAFCR---QH---GKGMVIGTTG 105 (273)
T ss_dssp -------------------------CCSCCEESCSTTTTTSCSEEEECSCHHHHHHHHHHHH---HT---TCEEEECCCC
T ss_pred -------------------------cCCceecCCHHHHhcCCCEEEEcCChHHHHHHHHHHH---hC---CCCEEEECCC
Confidence 0134557788887888999997777666655555543 33 4556665667
Q ss_pred CccccccccccCCHHHHHHhHhCCCCCcEEEEeCcchhHhhhccCceEEEEeCChhHHHHHHHHhcCCCceEEe
Q 012547 200 VEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWD 273 (461)
Q Consensus 200 i~~~~~~~~~~~~~se~i~~~lg~~~~~v~vlsGPn~a~ev~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~v~~ 273 (461)
+..+. .+.+.+.-. ...++..||+...+.. --+.++...+.|. .++.+.+
T Consensus 106 ~~~e~---------~~~L~~~a~----~~~vv~a~N~siGvn~----------~~~l~~~aa~~~~-~~~diei 155 (273)
T 1dih_A 106 FDEAG---------KQAIRDAAA----DIAIVFAANFSVGVNV----------MLKLLEKAAKVMG-DYTDIEI 155 (273)
T ss_dssp CCHHH---------HHHHHHHTT----TSCEEECSCCCHHHHH----------HHHHHHHHHHHHT-TTSEEEE
T ss_pred CCHHH---------HHHHHHhcC----CCCEEEEecCcHHHHH----------HHHHHHHHHHhcC-CCCCEEE
Confidence 76541 133444321 1235677877543321 0234566677775 4555554
No 234
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=97.17 E-value=0.0016 Score=67.46 Aligned_cols=107 Identities=16% Similarity=0.157 Sum_probs=65.8
Q ss_pred CCceEEEECccHH-HHHHHHHHHH--hcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhh
Q 012547 42 DPLRIVGVGAGAW-GSVFTAMLQD--SYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (461)
Q Consensus 42 ~~mkI~IIGaGam-G~alA~~La~--~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~ 118 (461)
++|||+|||+|+. +.++...|+. . ++ . ..+|.++|.++++++... . + .. .+..
T Consensus 1 ~~~KI~IIGaG~v~~~~l~~~l~~~~~-~l-~-~~el~L~Di~~~~~~~~~--~---~-~~-------------~~~~-- 56 (417)
T 1up7_A 1 RHMRIAVIGGGSSYTPELVKGLLDISE-DV-R-IDEVIFYDIDEEKQKIVV--D---F-VK-------------RLVK-- 56 (417)
T ss_dssp CCCEEEEETTTCTTHHHHHHHHHHHTT-TS-C-CCEEEEECSCHHHHHHHH--H---H-HH-------------HHHT--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhccc-CC-C-cCEEEEEeCCHHHHHHHH--H---H-HH-------------HHhh--
Confidence 3689999999984 2222234455 3 31 0 168999999987665311 0 0 00 0000
Q ss_pred hhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCch---------------------------
Q 012547 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPST--------------------------- 171 (461)
Q Consensus 119 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~--------------------------- 171 (461)
. . ..+..++|..+++++||+||++.-..
T Consensus 57 ----~--------------------~-~~v~~t~d~~~al~~AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GG 111 (417)
T 1up7_A 57 ----D--------------------R-FKVLISDTFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGG 111 (417)
T ss_dssp ----T--------------------S-SEEEECSSHHHHHTTCSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHH
T ss_pred ----C--------------------C-eEEEEeCCHHHHhCCCCEEEEcCCCCCCCccchhhhhhhhcCcccccccccch
Confidence 0 0 14667789888899999999998321
Q ss_pred ---------hHHHHHHHHHHHhhccCCCCEEEEEeecCcc
Q 012547 172 ---------ETKEVFEEISRYWKERITVPVIISLAKGVEA 202 (461)
Q Consensus 172 ---------~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~~ 202 (461)
.+.++++++.++. + +.++..+|-++.
T Consensus 112 i~~~~rni~i~~~i~~~i~~~~-~----A~lin~TNPvdi 146 (417)
T 1up7_A 112 FSAALRAFPIVEEYVDTVRKTS-N----ATIVNFTNPSGH 146 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT-C----CEEEECSSSHHH
T ss_pred hHHhhccHHHHHHHHHHHHHHC-C----EEEEEeCChHHH
Confidence 1445556666655 4 788989987754
No 235
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.14 E-value=0.0021 Score=63.03 Aligned_cols=65 Identities=17% Similarity=0.174 Sum_probs=47.5
Q ss_pred CcccccccchhHHhhHHHHHhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCchhhhh
Q 012547 15 NGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDR 87 (461)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~-~V~l~~r~~~~~~~ 87 (461)
+|-++-.|-.-.--+.-|++.. .+....++.|+|+|.+|.+++..|++. | . +|++++|+.+++++
T Consensus 101 ~g~l~G~NTD~~G~~~~l~~~~--~~l~~k~vlVlGaGG~g~aia~~L~~~-G-----~~~v~i~~R~~~~a~~ 166 (283)
T 3jyo_A 101 TGHTTGHNTDVSGFGRGMEEGL--PNAKLDSVVQVGAGGVGNAVAYALVTH-G-----VQKLQVADLDTSRAQA 166 (283)
T ss_dssp TSCEEEECHHHHHHHHHHHHHC--TTCCCSEEEEECCSHHHHHHHHHHHHT-T-----CSEEEEECSSHHHHHH
T ss_pred CCeEEEecCCHHHHHHHHHHhC--cCcCCCEEEEECCcHHHHHHHHHHHHC-C-----CCEEEEEECCHHHHHH
Confidence 5666666655444444555432 233446899999999999999999998 8 5 79999999887664
No 236
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=97.14 E-value=0.0016 Score=65.82 Aligned_cols=95 Identities=15% Similarity=0.117 Sum_probs=64.0
Q ss_pred CceEEEECccHHHH-HHHHHHHHhcCCCCCCee-EEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 43 PLRIVGVGAGAWGS-VFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 43 ~mkI~IIGaGamG~-alA~~La~~~G~~~~~~~-V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
++||+|||+|.+|. .++..+... + .+ |-+++++++.++.+.++ | .
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~~-~-----~~lvav~d~~~~~a~~~a~~---------------------~-~----- 72 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLRA-G-----ARLAGFHEKDDALAAEFSAV---------------------Y-A----- 72 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHHT-T-----CEEEEEECSCHHHHHHHHHH---------------------S-S-----
T ss_pred CcEEEEECcCHHHHHHHHHHhhcC-C-----cEEEEEEcCCHHHHHHHHHH---------------------c-C-----
Confidence 57999999999984 566666655 5 55 55888888765531110 1 0
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcC--CCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEee
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD--ADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~--aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tk 198 (461)
...+.+|+++.+.+ .|+|++|+|.....+++..... . +.. |.+-|
T Consensus 73 --------------------------~~~~~~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~---a---Gkh-Vl~EK 119 (361)
T 3u3x_A 73 --------------------------DARRIATAEEILEDENIGLIVSAAVSSERAELAIRAMQ---H---GKD-VLVDK 119 (361)
T ss_dssp --------------------------SCCEESCHHHHHTCTTCCEEEECCCHHHHHHHHHHHHH---T---TCE-EEEES
T ss_pred --------------------------CCcccCCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHH---C---CCe-EEEeC
Confidence 12456788888765 8999999999888777765543 3 333 44788
Q ss_pred cCccc
Q 012547 199 GVEAE 203 (461)
Q Consensus 199 Gi~~~ 203 (461)
-+...
T Consensus 120 Pla~~ 124 (361)
T 3u3x_A 120 PGMTS 124 (361)
T ss_dssp CSCSS
T ss_pred CCCCC
Confidence 77654
No 237
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=97.10 E-value=0.0013 Score=64.28 Aligned_cols=66 Identities=15% Similarity=0.307 Sum_probs=49.9
Q ss_pred cCcccccccchhHHhhHHHHHhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012547 14 SNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (461)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (461)
.+|-++.+|-...--..-|++ .|.. ..++|.|||+|.+|.+++..|+.. |. .+|++|+|+.+++++
T Consensus 93 ~~g~l~g~NTD~~G~~~~l~~-~~~~--~~~~vlvlGaGgaarav~~~L~~~-G~----~~i~v~nRt~~ka~~ 158 (271)
T 1npy_A 93 DNGFLRAYNTDYIAIVKLIEK-YHLN--KNAKVIVHGSGGMAKAVVAAFKNS-GF----EKLKIYARNVKTGQY 158 (271)
T ss_dssp ETTEEEEECHHHHHHHHHHHH-TTCC--TTSCEEEECSSTTHHHHHHHHHHT-TC----CCEEEECSCHHHHHH
T ss_pred cCCEEEeecCCHHHHHHHHHH-hCCC--CCCEEEEECCcHHHHHHHHHHHHC-CC----CEEEEEeCCHHHHHH
Confidence 467677777766666666665 3432 346899999999999999999988 71 389999999876654
No 238
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.10 E-value=0.0021 Score=64.76 Aligned_cols=94 Identities=14% Similarity=0.171 Sum_probs=62.8
Q ss_pred CCceEEEECccHHHHH-HHHHHHHhcCCCCCCeeE-EEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhh
Q 012547 42 DPLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (461)
Q Consensus 42 ~~mkI~IIGaGamG~a-lA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (461)
+++||+|||+|.||.. .+..+....+ .+| -+++++++.+.+ .| +
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~-----~~l~av~d~~~~~~~~------------------------~~-~---- 49 (362)
T 3fhl_A 4 EIIKTGLAAFGMSGQVFHAPFISTNPH-----FELYKIVERSKELSKE------------------------RY-P---- 49 (362)
T ss_dssp CCEEEEESCCSHHHHHTTHHHHHHCTT-----EEEEEEECSSCCGGGT------------------------TC-T----
T ss_pred CceEEEEECCCHHHHHHHHHHHhhCCC-----eEEEEEEcCCHHHHHH------------------------hC-C----
Confidence 4579999999999997 5666665412 555 477887653210 01 1
Q ss_pred hccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcC--CCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEe
Q 012547 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD--ADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (461)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~--aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~t 197 (461)
...+.+|+++.+.+ .|+|++|+|.....+++.... .. +.. |.+-
T Consensus 50 ---------------------------~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al---~a---Gkh-Vl~E 95 (362)
T 3fhl_A 50 ---------------------------QASIVRSFKELTEDPEIDLIVVNTPDNTHYEYAGMAL---EA---GKN-VVVE 95 (362)
T ss_dssp ---------------------------TSEEESCSHHHHTCTTCCEEEECSCGGGHHHHHHHHH---HT---TCE-EEEE
T ss_pred ---------------------------CCceECCHHHHhcCCCCCEEEEeCChHHHHHHHHHHH---HC---CCe-EEEe
Confidence 23556788888766 899999999988877766544 33 333 4477
Q ss_pred ecCccc
Q 012547 198 KGVEAE 203 (461)
Q Consensus 198 kGi~~~ 203 (461)
|-+...
T Consensus 96 KP~a~~ 101 (362)
T 3fhl_A 96 KPFTST 101 (362)
T ss_dssp SSCCSS
T ss_pred cCCCCC
Confidence 777554
No 239
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.09 E-value=0.0016 Score=65.61 Aligned_cols=94 Identities=23% Similarity=0.232 Sum_probs=61.9
Q ss_pred CCceEEEECccHHHHH-HHHHHHHhcCCCCCCeeE-EEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhh
Q 012547 42 DPLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (461)
Q Consensus 42 ~~mkI~IIGaGamG~a-lA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (461)
+++||+|||+|.||.. .+..+....+ .+| -+++++++++.+ .+ +
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~-----~~l~av~d~~~~~~~~------------------------~~-~---- 49 (358)
T 3gdo_A 4 DTIKVGILGYGLSGSVFHGPLLDVLDE-----YQISKIMTSRTEEVKR------------------------DF-P---- 49 (358)
T ss_dssp TCEEEEEECCSHHHHHTTHHHHTTCTT-----EEEEEEECSCHHHHHH------------------------HC-T----
T ss_pred CcceEEEEccCHHHHHHHHHHHhhCCC-----eEEEEEEcCCHHHHHh------------------------hC-C----
Confidence 4589999999999986 5666654312 555 467777643210 01 1
Q ss_pred hccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhc--CCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEe
Q 012547 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (461)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~--~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~t 197 (461)
...+.+|+++.+. +.|+|++|+|+....+++.... .. +..| .+-
T Consensus 50 ---------------------------~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al---~a---GkhV-l~E 95 (358)
T 3gdo_A 50 ---------------------------DAEVVHELEEITNDPAIELVIVTTPSGLHYEHTMACI---QA---GKHV-VME 95 (358)
T ss_dssp ---------------------------TSEEESSTHHHHTCTTCCEEEECSCTTTHHHHHHHHH---HT---TCEE-EEE
T ss_pred ---------------------------CCceECCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHH---Hc---CCeE-EEe
Confidence 2355678888876 6899999999988877776544 33 3444 367
Q ss_pred ecCccc
Q 012547 198 KGVEAE 203 (461)
Q Consensus 198 kGi~~~ 203 (461)
|.+...
T Consensus 96 KPla~~ 101 (358)
T 3gdo_A 96 KPMTAT 101 (358)
T ss_dssp SSCCSS
T ss_pred cCCcCC
Confidence 776554
No 240
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=97.08 E-value=0.0013 Score=67.84 Aligned_cols=99 Identities=15% Similarity=0.136 Sum_probs=63.9
Q ss_pred CCceEEEECccH---HHHHHHHHHHHhcCCCCCCeeEE--EEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccch
Q 012547 42 DPLRIVGVGAGA---WGSVFTAMLQDSYGYLRDKVLIR--IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKY 116 (461)
Q Consensus 42 ~~mkI~IIGaGa---mG~alA~~La~~~G~~~~~~~V~--l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~ 116 (461)
+++||+|||+|. ||...+..+... + ..++. +++++++.+++..++ + +
T Consensus 36 ~~~rvgiiG~G~~~~ig~~h~~~~~~~-~----~~~lva~v~d~~~~~a~~~a~~---------------------~--g 87 (417)
T 3v5n_A 36 KRIRLGMVGGGSGAFIGAVHRIAARLD-D----HYELVAGALSSTPEKAEASGRE---------------------L--G 87 (417)
T ss_dssp CCEEEEEESCC--CHHHHHHHHHHHHT-S----CEEEEEEECCSSHHHHHHHHHH---------------------H--T
T ss_pred CcceEEEEcCCCchHHHHHHHHHHhhC-C----CcEEEEEEeCCCHHHHHHHHHH---------------------c--C
Confidence 457999999999 999888877765 3 25654 678888765532110 0 0
Q ss_pred hhhhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcC-------CCEEEEcCCchhHHHHHHHHHHHhhccCC
Q 012547 117 VEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD-------ADIVINGLPSTETKEVFEEISRYWKERIT 189 (461)
Q Consensus 117 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~-------aDiIIiaVps~~~~~vl~~i~~~l~~~~~ 189 (461)
+ ....+.+|+++.+.+ .|+|++|+|.....+++.... ..
T Consensus 88 ~----------------------------~~~~~~~~~~~ll~~~~~~~~~vD~V~I~tp~~~H~~~~~~al---~a--- 133 (417)
T 3v5n_A 88 L----------------------------DPSRVYSDFKEMAIREAKLKNGIEAVAIVTPNHVHYAAAKEFL---KR--- 133 (417)
T ss_dssp C----------------------------CGGGBCSCHHHHHHHHHHCTTCCSEEEECSCTTSHHHHHHHHH---TT---
T ss_pred C----------------------------CcccccCCHHHHHhcccccCCCCcEEEECCCcHHHHHHHHHHH---hC---
Confidence 0 011345677777654 899999999988877766654 33
Q ss_pred CCEEEEEeecCccc
Q 012547 190 VPVIISLAKGVEAE 203 (461)
Q Consensus 190 ~~iIIs~tkGi~~~ 203 (461)
+.. |.|-|-+...
T Consensus 134 Gkh-Vl~EKPla~~ 146 (417)
T 3v5n_A 134 GIH-VICDKPLTST 146 (417)
T ss_dssp TCE-EEEESSSCSS
T ss_pred CCe-EEEECCCcCC
Confidence 344 4577876654
No 241
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.07 E-value=0.0014 Score=67.77 Aligned_cols=40 Identities=20% Similarity=0.416 Sum_probs=35.7
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (461)
..|+|.|+|+|.+|..+|..|... | ++|++++++++.++.
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~-g-----~~vvvId~d~~~v~~ 42 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSS-G-----VKMVVLDHDPDHIET 42 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECCHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC-C-----CCEEEEECCHHHHHH
Confidence 347899999999999999999998 8 999999999987764
No 242
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=97.06 E-value=0.0061 Score=62.21 Aligned_cols=42 Identities=14% Similarity=0.067 Sum_probs=32.2
Q ss_pred CCceEEEEC-ccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchh
Q 012547 42 DPLRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (461)
Q Consensus 42 ~~mkI~IIG-aGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (461)
.++||+|+| +|.+|.+++..|+.. +.+.+..++.|++.+.+.
T Consensus 31 ~~~KV~ViGAaG~VG~~la~~l~~~-~l~~e~~~l~L~d~d~~~ 73 (375)
T 7mdh_A 31 KLVNIAVSGAAGMISNHLLFKLASG-EVFGQDQPIALKLLGSER 73 (375)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHT-TTTCTTCCEEEEEECCGG
T ss_pred CCCEEEEECCCChHHHHHHHHHHcC-CcCCCCceeEEEecCccc
Confidence 568999999 799999999999988 765432347787665543
No 243
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.04 E-value=0.0015 Score=65.07 Aligned_cols=36 Identities=19% Similarity=0.371 Sum_probs=28.0
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCee-EEEEecCch
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGR 83 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~-V~l~~r~~~ 83 (461)
++||+|||+|+||..++..+.+. + +.+ |.+++++++
T Consensus 3 ~irV~IiG~G~mG~~~~~~l~~~-~----~~elvav~d~~~~ 39 (320)
T 1f06_A 3 NIRVAIVGYGNLGRSVEKLIAKQ-P----DMDLVGIFSRRAT 39 (320)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTC-S----SEEEEEEEESSSC
T ss_pred CCEEEEEeecHHHHHHHHHHhcC-C----CCEEEEEEcCCHH
Confidence 57999999999999999998765 3 144 457777753
No 244
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.00 E-value=0.00091 Score=62.91 Aligned_cols=37 Identities=14% Similarity=-0.031 Sum_probs=32.4
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (461)
.++|.|+|+|.+|..++..|.+. | + |++++++++.++
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~-g-----~-v~vid~~~~~~~ 45 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGS-E-----V-FVLAEDENVRKK 45 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTS-E-----E-EEEESCGGGHHH
T ss_pred CCEEEEECCChHHHHHHHHHHhC-C-----e-EEEEECCHHHHH
Confidence 47899999999999999999887 7 8 999999987654
No 245
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=96.97 E-value=0.0018 Score=67.35 Aligned_cols=107 Identities=14% Similarity=0.099 Sum_probs=70.2
Q ss_pred hHHhhHHHHHhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhH
Q 012547 25 LEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVL 104 (461)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~ 104 (461)
-+.-+|.+++-.+.. -.-++|+|+|.|.+|..+|..|... | .+|++|++++......
T Consensus 194 ~~slldgi~ratg~~-L~GktVgIiG~G~IG~~vA~~Lka~-G-----a~Viv~D~~p~~a~~A---------------- 250 (436)
T 3h9u_A 194 RESLVDGIKRATDVM-IAGKTACVCGYGDVGKGCAAALRGF-G-----ARVVVTEVDPINALQA---------------- 250 (436)
T ss_dssp HHHHHHHHHHHHCCC-CTTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHHHH----------------
T ss_pred hHHHHHHHHHhcCCc-ccCCEEEEEeeCHHHHHHHHHHHHC-C-----CEEEEECCChhhhHHH----------------
Confidence 334466776665443 2336899999999999999999887 8 8999999987432210
Q ss_pred HhhhhcccccchhhhhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHh
Q 012547 105 RRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYW 184 (461)
Q Consensus 105 ~~~~~n~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l 184 (461)
.. . +.. ..+++++++.||+|+++.....+-. .+....+
T Consensus 251 ---------~~------------------~------------G~~-~~sL~eal~~ADVVilt~gt~~iI~--~e~l~~M 288 (436)
T 3h9u_A 251 ---------AM------------------E------------GYQ-VLLVEDVVEEAHIFVTTTGNDDIIT--SEHFPRM 288 (436)
T ss_dssp ---------HH------------------T------------TCE-ECCHHHHTTTCSEEEECSSCSCSBC--TTTGGGC
T ss_pred ---------HH------------------h------------CCe-ecCHHHHHhhCCEEEECCCCcCccC--HHHHhhc
Confidence 00 0 122 2478899999999999776543211 1223334
Q ss_pred hccCCCCEEEEEeec
Q 012547 185 KERITVPVIISLAKG 199 (461)
Q Consensus 185 ~~~~~~~iIIs~tkG 199 (461)
++ ++++|.+..|
T Consensus 289 K~---gAIVINvgRg 300 (436)
T 3h9u_A 289 RD---DAIVCNIGHF 300 (436)
T ss_dssp CT---TEEEEECSSS
T ss_pred CC---CcEEEEeCCC
Confidence 55 6778877765
No 246
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.97 E-value=0.0011 Score=69.77 Aligned_cols=52 Identities=17% Similarity=0.248 Sum_probs=33.8
Q ss_pred ccccchhHHhhHHHHHhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012547 19 HHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (461)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (461)
||..|.++..+. ++||.|+|+|.+|.+++..|++. + +++|++++|+.++++.
T Consensus 11 ~~~~~~~~~~l~------------~k~VlIiGAGgiG~aia~~L~~~-~----g~~V~v~~R~~~ka~~ 62 (467)
T 2axq_A 11 HHSSGHIEGRHM------------GKNVLLLGSGFVAQPVIDTLAAN-D----DINVTVACRTLANAQA 62 (467)
T ss_dssp ------------------------CEEEEEECCSTTHHHHHHHHHTS-T----TEEEEEEESSHHHHHH
T ss_pred cccCCccccCCC------------CCEEEEECChHHHHHHHHHHHhC-C----CCeEEEEECCHHHHHH
Confidence 566676654432 36899999999999999999976 3 2789999999876553
No 247
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=96.97 E-value=0.0019 Score=68.02 Aligned_cols=92 Identities=16% Similarity=0.054 Sum_probs=63.1
Q ss_pred CCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 41 ~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
...++|+|||.|.+|..+|..+... | .+|++|+++...... ...
T Consensus 255 l~GktVgIIG~G~IG~~vA~~l~~~-G-----~~Viv~d~~~~~~~~-------------------------a~~----- 298 (479)
T 1v8b_A 255 ISGKIVVICGYGDVGKGCASSMKGL-G-----ARVYITEIDPICAIQ-------------------------AVM----- 298 (479)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHH-T-----CEEEEECSCHHHHHH-------------------------HHT-----
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhC-c-----CEEEEEeCChhhHHH-------------------------HHH-----
Confidence 3457999999999999999999887 8 899999998753211 000
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeec
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkG 199 (461)
. .+.. .++++++++||+|++++....+- -.+....+++ ++++|.+.-|
T Consensus 299 -------------~------------g~~~-~~l~ell~~aDiVi~~~~t~~lI--~~~~l~~MK~---gailiNvgrg 346 (479)
T 1v8b_A 299 -------------E------------GFNV-VTLDEIVDKGDFFITCTGNVDVI--KLEHLLKMKN---NAVVGNIGHF 346 (479)
T ss_dssp -------------T------------TCEE-CCHHHHTTTCSEEEECCSSSSSB--CHHHHTTCCT---TCEEEECSST
T ss_pred -------------c------------CCEe-cCHHHHHhcCCEEEECCChhhhc--CHHHHhhcCC---CcEEEEeCCC
Confidence 0 1222 46888999999999997543321 0122333555 6788877765
No 248
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.96 E-value=0.0064 Score=58.28 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=30.9
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
.+|.|||+|.+|+.+|..|+.. |. .++++++++.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~-Gv----~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASA-GV----GNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TC----SEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHc-CC----CeEEEEcCCC
Confidence 6899999999999999999999 82 4899999986
No 249
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=96.95 E-value=0.0029 Score=61.44 Aligned_cols=66 Identities=15% Similarity=0.076 Sum_probs=47.3
Q ss_pred cCcccccccchhHHhhHHHHHhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012547 14 SNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (461)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (461)
.+|-++-.|-.-.--+.-|++ .|. +...++|.|+|+|.+|.+++..|++. | .+|++|+|+.+++++
T Consensus 92 ~~g~l~g~NTD~~G~~~~L~~-~~~-~~~~~~vlvlGaGg~g~a~a~~L~~~-G-----~~v~v~~R~~~~a~~ 157 (272)
T 1p77_A 92 DDGKLYADNTDGIGLVTDLQR-LNW-LRPNQHVLILGAGGATKGVLLPLLQA-Q-----QNIVLANRTFSKTKE 157 (272)
T ss_dssp TTSCEEEECCHHHHHHHHHHH-TTC-CCTTCEEEEECCSHHHHTTHHHHHHT-T-----CEEEEEESSHHHHHH
T ss_pred cCCEEEEecCCHHHHHHHHHH-hCC-CcCCCEEEEECCcHHHHHHHHHHHHC-C-----CEEEEEECCHHHHHH
Confidence 455444455444444444554 232 23447899999999999999999998 8 899999999876654
No 250
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=96.95 E-value=0.0015 Score=66.65 Aligned_cols=98 Identities=10% Similarity=0.037 Sum_probs=64.4
Q ss_pred CceEEEECccH---HHHHHHHHHHHhcCCCCCCeeEE--EEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchh
Q 012547 43 PLRIVGVGAGA---WGSVFTAMLQDSYGYLRDKVLIR--IWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYV 117 (461)
Q Consensus 43 ~mkI~IIGaGa---mG~alA~~La~~~G~~~~~~~V~--l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~ 117 (461)
++||+|||+|. ||...+..+... + ..++. +++++++.++.+.++ | ++
T Consensus 12 ~~rvgiiG~G~~~~ig~~h~~~~~~~-~----~~~lva~v~d~~~~~a~~~a~~---------------------~--g~ 63 (398)
T 3dty_A 12 PIRWAMVGGGSQSQIGYIHRCAALRD-N----TFVLVAGAFDIDPIRGSAFGEQ---------------------L--GV 63 (398)
T ss_dssp CEEEEEEECCTTCSSHHHHHHHHHGG-G----SEEEEEEECCSSHHHHHHHHHH---------------------T--TC
T ss_pred cceEEEEcCCccchhHHHHHHHHhhC-C----CeEEEEEEeCCCHHHHHHHHHH---------------------h--CC
Confidence 47999999999 999988888766 3 25655 578887765532110 0 00
Q ss_pred hhhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcC-------CCEEEEcCCchhHHHHHHHHHHHhhccCCC
Q 012547 118 EARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWD-------ADIVINGLPSTETKEVFEEISRYWKERITV 190 (461)
Q Consensus 118 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~-------aDiIIiaVps~~~~~vl~~i~~~l~~~~~~ 190 (461)
....+.+|+++.+.+ .|+|++|+|.....+++..... . +
T Consensus 64 ----------------------------~~~~~~~~~~~ll~~~~~~~~~vD~V~i~tp~~~H~~~~~~al~---a---G 109 (398)
T 3dty_A 64 ----------------------------DSERCYADYLSMFEQEARRADGIQAVSIATPNGTHYSITKAALE---A---G 109 (398)
T ss_dssp ----------------------------CGGGBCSSHHHHHHHHTTCTTCCSEEEEESCGGGHHHHHHHHHH---T---T
T ss_pred ----------------------------CcceeeCCHHHHHhcccccCCCCCEEEECCCcHHHHHHHHHHHH---C---C
Confidence 011345677777653 8999999999988777766543 3 3
Q ss_pred CEEEEEeecCccc
Q 012547 191 PVIISLAKGVEAE 203 (461)
Q Consensus 191 ~iIIs~tkGi~~~ 203 (461)
.. |.|-|-+...
T Consensus 110 kh-Vl~EKPla~~ 121 (398)
T 3dty_A 110 LH-VVCEKPLCFT 121 (398)
T ss_dssp CE-EEECSCSCSC
T ss_pred Ce-EEEeCCCcCC
Confidence 43 3467776553
No 251
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=96.95 E-value=0.00077 Score=68.99 Aligned_cols=40 Identities=15% Similarity=0.147 Sum_probs=35.1
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (461)
...||+|||+|.+|..+|..+... | .+|++|+++.++++.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~l-G-----a~V~v~D~~~~~l~~ 222 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRL-G-----AKTTGYDVRPEVAEQ 222 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHH-T-----CEEEEECSSGGGHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHH
Confidence 447999999999999999999888 8 899999999876654
No 252
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=96.93 E-value=0.0018 Score=64.66 Aligned_cols=88 Identities=16% Similarity=0.105 Sum_probs=59.6
Q ss_pred CceEEEECccHHHH-HHHHHHHHhcCCCCCCeeE-EEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 43 PLRIVGVGAGAWGS-VFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 43 ~mkI~IIGaGamG~-alA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
++||+|||+|.||. ..+..+....+ .+| -+++++++. +
T Consensus 25 ~~rvgiiG~G~ig~~~~~~~l~~~~~-----~~lvav~d~~~~~----------------------------~------- 64 (330)
T 4ew6_A 25 PINLAIVGVGKIVRDQHLPSIAKNAN-----FKLVATASRHGTV----------------------------E------- 64 (330)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHHCTT-----EEEEEEECSSCCC----------------------------T-------
T ss_pred CceEEEEecCHHHHHHHHHHHHhCCC-----eEEEEEEeCChhh----------------------------c-------
Confidence 57999999999998 67888876512 554 356665421 0
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhc---CCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEe
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW---DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~---~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~t 197 (461)
++...+|+++.+. +.|+|++|+|+....+++..... . +..|+ +-
T Consensus 65 --------------------------g~~~~~~~~~ll~~~~~vD~V~i~tp~~~H~~~~~~al~---a---GkhVl-~E 111 (330)
T 4ew6_A 65 --------------------------GVNSYTTIEAMLDAEPSIDAVSLCMPPQYRYEAAYKALV---A---GKHVF-LE 111 (330)
T ss_dssp --------------------------TSEEESSHHHHHHHCTTCCEEEECSCHHHHHHHHHHHHH---T---TCEEE-EC
T ss_pred --------------------------CCCccCCHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHH---c---CCcEE-Ee
Confidence 2335577887765 48999999999888777766543 3 34444 77
Q ss_pred ecCccc
Q 012547 198 KGVEAE 203 (461)
Q Consensus 198 kGi~~~ 203 (461)
|.+...
T Consensus 112 KP~a~~ 117 (330)
T 4ew6_A 112 KPPGAT 117 (330)
T ss_dssp SSSCSS
T ss_pred CCCCCC
Confidence 766543
No 253
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=96.89 E-value=0.0061 Score=60.26 Aligned_cols=96 Identities=11% Similarity=-0.004 Sum_probs=64.7
Q ss_pred CCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 42 ~~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
.|+||+|||+ |.||...+..+... + ..-|.+++++++.... . .+.+
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~-~----~~lvav~d~~~~~~~~----------~-------------~~~~----- 48 (312)
T 3o9z_A 2 HMTRFALTGLAGYIAPRHLKAIKEV-G----GVLVASLDPATNVGLV----------D-------------SFFP----- 48 (312)
T ss_dssp -CCEEEEECTTSSSHHHHHHHHHHT-T----CEEEEEECSSCCCGGG----------G-------------GTCT-----
T ss_pred CceEEEEECCChHHHHHHHHHHHhC-C----CEEEEEEcCCHHHHHH----------H-------------hhCC-----
Confidence 4689999999 78999999999877 6 1345678888754210 0 0011
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHh----------cCCCEEEEcCCchhHHHHHHHHHHHhhccCCC
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAV----------WDADIVINGLPSTETKEVFEEISRYWKERITV 190 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av----------~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~ 190 (461)
...+.+|.++.+ .+.|+|++|+|+....+++..... . +
T Consensus 49 --------------------------~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~tP~~~H~~~~~~al~---a---G 96 (312)
T 3o9z_A 49 --------------------------EAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALR---L---G 96 (312)
T ss_dssp --------------------------TCEEESCHHHHHHHHHHHHHTTCCCSEEEECSCGGGHHHHHHHHHH---T---T
T ss_pred --------------------------CCceeCCHHHHHHHhhhhcccCCCCcEEEECCCchhhHHHHHHHHH---C---C
Confidence 235566777665 568999999999988887766543 3 3
Q ss_pred CEEEEEeecCccc
Q 012547 191 PVIISLAKGVEAE 203 (461)
Q Consensus 191 ~iIIs~tkGi~~~ 203 (461)
..| .+-|.+...
T Consensus 97 khV-l~EKPla~~ 108 (312)
T 3o9z_A 97 ANA-LSEKPLVLW 108 (312)
T ss_dssp CEE-EECSSSCSC
T ss_pred CeE-EEECCCCCC
Confidence 444 477877654
No 254
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=96.89 E-value=0.0032 Score=63.02 Aligned_cols=49 Identities=12% Similarity=0.174 Sum_probs=34.5
Q ss_pred eEEecCHHHHhcC--CCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecCccc
Q 012547 148 LKVVTNLQEAVWD--ADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEAE 203 (461)
Q Consensus 148 i~~t~dl~~av~~--aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~~~ 203 (461)
+...+|+++.+.+ .|+|++|+|+....+++.... .. +..|+ +-|.+...
T Consensus 51 ~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al---~a---Gk~Vl-~EKP~a~~ 101 (349)
T 3i23_A 51 VNFTADLNELLTDPEIELITICTPAHTHYDLAKQAI---LA---GKSVI-VEKPFCDT 101 (349)
T ss_dssp CEEESCTHHHHSCTTCCEEEECSCGGGHHHHHHHHH---HT---TCEEE-ECSCSCSS
T ss_pred CeEECCHHHHhcCCCCCEEEEeCCcHHHHHHHHHHH---Hc---CCEEE-EECCCcCC
Confidence 4566888888765 899999999988877776654 33 34443 67776543
No 255
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=96.86 E-value=0.0044 Score=60.79 Aligned_cols=67 Identities=19% Similarity=0.089 Sum_probs=47.4
Q ss_pred cCcccccccchhHHhhHHHHHhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012547 14 SNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (461)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (461)
.+|-++-.|-.-.--+.-|++. |. +...+++.|+|+|.+|.+++..|++. |. .+|++|+|+.+++++
T Consensus 99 ~~g~l~G~NTD~~G~~~~L~~~-~~-~l~~k~vlvlGaGg~g~aia~~L~~~-G~----~~v~v~~R~~~~a~~ 165 (281)
T 3o8q_A 99 DDGEILGDNTDGEGLVQDLLAQ-QV-LLKGATILLIGAGGAARGVLKPLLDQ-QP----ASITVTNRTFAKAEQ 165 (281)
T ss_dssp TTSCEEEECCHHHHHHHHHHHT-TC-CCTTCEEEEECCSHHHHHHHHHHHTT-CC----SEEEEEESSHHHHHH
T ss_pred CCCcEEEEecHHHHHHHHHHHh-CC-CccCCEEEEECchHHHHHHHHHHHhc-CC----CeEEEEECCHHHHHH
Confidence 4665665565544444445442 22 23447899999999999999999998 71 389999999877654
No 256
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=96.86 E-value=0.0025 Score=67.31 Aligned_cols=100 Identities=12% Similarity=0.073 Sum_probs=66.0
Q ss_pred HHHhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcc
Q 012547 32 LRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRC 111 (461)
Q Consensus 32 ~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~ 111 (461)
+++..|. +...++|+|||.|.+|..+|..+..- | .+|++|+++...... .
T Consensus 267 w~~~~g~-~L~GktVgIIG~G~IG~~vA~~l~~~-G-----~~V~v~d~~~~~~~~-----------a------------ 316 (494)
T 3d64_A 267 IKRATDV-MIAGKIAVVAGYGDVGKGCAQSLRGL-G-----ATVWVTEIDPICALQ-----------A------------ 316 (494)
T ss_dssp HHHHHCC-CCTTCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEECSCHHHHHH-----------H------------
T ss_pred hhhcccc-ccCCCEEEEEccCHHHHHHHHHHHHC-C-----CEEEEEeCChHhHHH-----------H------------
Confidence 3444442 33447999999999999999999876 7 899999998753210 0
Q ss_pred cccchhhhhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCC
Q 012547 112 AYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVP 191 (461)
Q Consensus 112 ~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~ 191 (461)
.. . +... .++++++++||+|++++....+- -++....+++ ++
T Consensus 317 --~~------------------~------------G~~~-~~l~ell~~aDiVi~~~~t~~lI--~~~~l~~MK~---gA 358 (494)
T 3d64_A 317 --AM------------------E------------GYRV-VTMEYAADKADIFVTATGNYHVI--NHDHMKAMRH---NA 358 (494)
T ss_dssp --HT------------------T------------TCEE-CCHHHHTTTCSEEEECSSSSCSB--CHHHHHHCCT---TE
T ss_pred --HH------------------c------------CCEe-CCHHHHHhcCCEEEECCCccccc--CHHHHhhCCC---Cc
Confidence 00 0 1222 46888999999999998543211 0223334555 67
Q ss_pred EEEEEeec
Q 012547 192 VIISLAKG 199 (461)
Q Consensus 192 iIIs~tkG 199 (461)
++|.+.-|
T Consensus 359 ilINvgrg 366 (494)
T 3d64_A 359 IVCNIGHF 366 (494)
T ss_dssp EEEECSSS
T ss_pred EEEEcCCC
Confidence 88877766
No 257
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=96.85 E-value=0.0058 Score=63.34 Aligned_cols=101 Identities=17% Similarity=0.117 Sum_probs=64.9
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeE-EEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
+++||+|||+|.||...+..+....+ .+| .++++++++++.+.+ .+.+ + ++
T Consensus 19 ~~~rvgiIG~G~~g~~h~~~l~~~~~-----~~lvav~d~~~~~~~~~a~-----~~~~-------------~--g~--- 70 (444)
T 2ixa_A 19 KKVRIAFIAVGLRGQTHVENMARRDD-----VEIVAFADPDPYMVGRAQE-----ILKK-------------N--GK--- 70 (444)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCTT-----EEEEEEECSCHHHHHHHHH-----HHHH-------------T--TC---
T ss_pred CCceEEEEecCHHHHHHHHHHHhCCC-----cEEEEEEeCCHHHHHHHHH-----HHHh-------------c--CC---
Confidence 45799999999999998888876413 554 588888876553211 0000 0 00
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEec----CHHHHhc--CCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEE
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVT----NLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVII 194 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~----dl~~av~--~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iII 194 (461)
....+.+ |+++.+. +.|+|++|+|.....+++.+.. .. +..|
T Consensus 71 -------------------------~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~h~~~~~~al---~a---GkhV- 118 (444)
T 2ixa_A 71 -------------------------KPAKVFGNGNDDYKNMLKDKNIDAVFVSSPWEWHHEHGVAAM---KA---GKIV- 118 (444)
T ss_dssp -------------------------CCCEEECSSTTTHHHHTTCTTCCEEEECCCGGGHHHHHHHHH---HT---TCEE-
T ss_pred -------------------------CCCceeccCCCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHH---HC---CCeE-
Confidence 0133445 8888876 5899999999988777666543 33 4444
Q ss_pred EEeecCcc
Q 012547 195 SLAKGVEA 202 (461)
Q Consensus 195 s~tkGi~~ 202 (461)
.+-|-+..
T Consensus 119 ~~EKP~a~ 126 (444)
T 2ixa_A 119 GMEVSGAI 126 (444)
T ss_dssp EECCCCCS
T ss_pred EEeCCCcC
Confidence 46676543
No 258
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=96.85 E-value=0.003 Score=66.43 Aligned_cols=85 Identities=16% Similarity=0.151 Sum_probs=59.2
Q ss_pred CCCceEEEECc----cHHHHHHHHHHHHh-cCCCCCCeeE-EEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhccccc
Q 012547 41 GDPLRIVGVGA----GAWGSVFTAMLQDS-YGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYL 114 (461)
Q Consensus 41 ~~~mkI~IIGa----GamG~alA~~La~~-~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l 114 (461)
.+++||+|||+ |.||...+..|... .+ .+| .+++++++.++.+.+ . +
T Consensus 37 m~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~-----~~lvav~d~~~~~a~~~a~--------~-------------~- 89 (479)
T 2nvw_A 37 SRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQ-----FQIVALYNPTLKSSLQTIE--------Q-------------L- 89 (479)
T ss_dssp GCCEEEEEECCCSTTSHHHHTHHHHHHHTTTT-----EEEEEEECSCHHHHHHHHH--------H-------------T-
T ss_pred CCcCEEEEEcccCCCCHHHHHHHHHHHhcCCC-----eEEEEEEeCCHHHHHHHHH--------H-------------c-
Confidence 34689999999 99999999988764 23 564 578888765543111 0 0
Q ss_pred chhhhhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhc--CCCEEEEcCCchhHHHHHHHHH
Q 012547 115 KYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEIS 181 (461)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~--~aDiIIiaVps~~~~~vl~~i~ 181 (461)
++ ....+.+|+++.+. +.|+|++|+|.....+++....
T Consensus 90 -g~----------------------------~~~~~~~d~~ell~~~~vD~V~I~tp~~~H~~~~~~al 129 (479)
T 2nvw_A 90 -QL----------------------------KHATGFDSLESFAQYKDIDMIVVSVKVPEHYEVVKNIL 129 (479)
T ss_dssp -TC----------------------------TTCEEESCHHHHHHCTTCSEEEECSCHHHHHHHHHHHH
T ss_pred -CC----------------------------CcceeeCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHH
Confidence 00 02346688888875 6899999999988777766544
No 259
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=96.82 E-value=0.01 Score=61.96 Aligned_cols=53 Identities=23% Similarity=0.270 Sum_probs=36.4
Q ss_pred hHHhhHHHHHhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCee-EEEEecCchhhhh
Q 012547 25 LEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRSVDR 87 (461)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~-V~l~~r~~~~~~~ 87 (461)
|-.+|.+.... .+++||+|||+|.||..++..+....+ .+ |-+++++.++++.
T Consensus 10 l~~~l~~r~~~-----~k~IRVGIIGaG~iG~~~~~~l~~~~~-----veLvAV~D~~~era~~ 63 (446)
T 3upl_A 10 LARDLAARAET-----GKPIRIGLIGAGEMGTDIVTQVARMQG-----IEVGALSARRLPNTFK 63 (446)
T ss_dssp HHHHHHHHHHT-----TCCEEEEEECCSHHHHHHHHHHTTSSS-----EEEEEEECSSTHHHHH
T ss_pred HHHHHHHHHhc-----CCceEEEEECChHHHHHHHHHHhhCCC-----cEEEEEEeCCHHHHHH
Confidence 45555443332 356899999999999999988765412 44 5578888876654
No 260
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=96.82 E-value=0.0048 Score=61.75 Aligned_cols=101 Identities=13% Similarity=0.117 Sum_probs=62.1
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCC--CCCee-EEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhh
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYL--RDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~--~~~~~-V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (461)
+-||+|||+|.||..-+..+......+ .+..+ |-+++++++.+++..++ | .
T Consensus 25 kirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~---------------------~-g---- 78 (393)
T 4fb5_A 25 PLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGE---------------------F-G---- 78 (393)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHH---------------------H-T----
T ss_pred CccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHH---------------------h-C----
Confidence 468999999999987666553210000 00123 55788888766542110 0 0
Q ss_pred hccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhc--CCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEe
Q 012547 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (461)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~--~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~t 197 (461)
-.++.+|+++.+. +.|+|++|+|+....+++..... . +.. |.|-
T Consensus 79 ---------------------------~~~~y~d~~ell~~~~iDaV~IatP~~~H~~~a~~al~---a---Gkh-Vl~E 124 (393)
T 4fb5_A 79 ---------------------------FEKATADWRALIADPEVDVVSVTTPNQFHAEMAIAALE---A---GKH-VWCE 124 (393)
T ss_dssp ---------------------------CSEEESCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHH---T---TCE-EEEC
T ss_pred ---------------------------CCeecCCHHHHhcCCCCcEEEECCChHHHHHHHHHHHh---c---CCe-EEEc
Confidence 1145688888775 47999999999988887766543 2 333 4578
Q ss_pred ecCccc
Q 012547 198 KGVEAE 203 (461)
Q Consensus 198 kGi~~~ 203 (461)
|-+...
T Consensus 125 KPla~~ 130 (393)
T 4fb5_A 125 KPMAPA 130 (393)
T ss_dssp SCSCSS
T ss_pred cCCccc
Confidence 887764
No 261
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=96.79 E-value=0.0079 Score=59.59 Aligned_cols=96 Identities=14% Similarity=0.010 Sum_probs=64.4
Q ss_pred CCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 42 ~~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
.|+||+|||+ |.||...+..+... + ..-|.+++++++.... .. ..+
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~-~----~~lvav~d~~~~~~~~----------~~-------------~~~----- 48 (318)
T 3oa2_A 2 HMKNFALIGAAGYIAPRHMRAIKDT-G----NCLVSAYDINDSVGII----------DS-------------ISP----- 48 (318)
T ss_dssp -CCEEEEETTTSSSHHHHHHHHHHT-T----CEEEEEECSSCCCGGG----------GG-------------TCT-----
T ss_pred CceEEEEECCCcHHHHHHHHHHHhC-C----CEEEEEEcCCHHHHHH----------Hh-------------hCC-----
Confidence 4689999999 78999999999877 6 1346678887653210 00 011
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHh-----------cCCCEEEEcCCchhHHHHHHHHHHHhhccCC
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAV-----------WDADIVINGLPSTETKEVFEEISRYWKERIT 189 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av-----------~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~ 189 (461)
...+.+|+++.+ .+.|+|++|+|+....+++..... .
T Consensus 49 --------------------------~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I~tP~~~H~~~~~~al~---a--- 96 (318)
T 3oa2_A 49 --------------------------QSEFFTEFEFFLDHASNLKRDSATALDYVSICSPNYLHYPHIAAGLR---L--- 96 (318)
T ss_dssp --------------------------TCEEESSHHHHHHHHHHHTTSTTTSCCEEEECSCGGGHHHHHHHHHH---T---
T ss_pred --------------------------CCcEECCHHHHHHhhhhhhhccCCCCcEEEECCCcHHHHHHHHHHHH---C---
Confidence 234566777654 568999999999988887766543 2
Q ss_pred CCEEEEEeecCccc
Q 012547 190 VPVIISLAKGVEAE 203 (461)
Q Consensus 190 ~~iIIs~tkGi~~~ 203 (461)
+.. |.+-|-+...
T Consensus 97 Gkh-Vl~EKPla~~ 109 (318)
T 3oa2_A 97 GCD-VICEKPLVPT 109 (318)
T ss_dssp TCE-EEECSSCCSC
T ss_pred CCe-EEEECCCcCC
Confidence 333 4477876654
No 262
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=96.75 E-value=0.0023 Score=66.31 Aligned_cols=85 Identities=12% Similarity=0.087 Sum_probs=59.1
Q ss_pred CCceEEEECc----cHHHHHHHHHHHHh-cCCCCCCeeE-EEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccc
Q 012547 42 DPLRIVGVGA----GAWGSVFTAMLQDS-YGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLK 115 (461)
Q Consensus 42 ~~mkI~IIGa----GamG~alA~~La~~-~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~ 115 (461)
+++||+|||+ |.||...+..|.+. .+ .+| .+++++++.++.+.+ . +
T Consensus 19 ~~irvgiIG~g~~gG~~g~~~~~~l~~~~~~-----~~lvav~d~~~~~~~~~a~--------~-------------~-- 70 (438)
T 3btv_A 19 APIRVGFVGLNAAKGWAIKTHYPAILQLSSQ-----FQITALYSPKIETSIATIQ--------R-------------L-- 70 (438)
T ss_dssp CCEEEEEESCCTTSSSTTTTHHHHHHHTTTT-----EEEEEEECSSHHHHHHHHH--------H-------------T--
T ss_pred CCCEEEEEcccCCCChHHHHHHHHHHhcCCC-----eEEEEEEeCCHHHHHHHHH--------H-------------c--
Confidence 4589999999 99999999988764 23 564 578888765543111 0 0
Q ss_pred hhhhhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhc--CCCEEEEcCCchhHHHHHHHHHH
Q 012547 116 YVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISR 182 (461)
Q Consensus 116 ~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~--~aDiIIiaVps~~~~~vl~~i~~ 182 (461)
++ ..+.+.+|+++.+. +.|+|++|+|.....+++.....
T Consensus 71 g~----------------------------~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~ 111 (438)
T 3btv_A 71 KL----------------------------SNATAFPTLESFASSSTIDMIVIAIQVASHYEVVMPLLE 111 (438)
T ss_dssp TC----------------------------TTCEEESSHHHHHHCSSCSEEEECSCHHHHHHHHHHHHH
T ss_pred CC----------------------------CcceeeCCHHHHhcCCCCCEEEEeCCcHHHHHHHHHHHH
Confidence 00 02346678888875 58999999999887777665543
No 263
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=96.68 E-value=0.0054 Score=52.72 Aligned_cols=90 Identities=14% Similarity=0.081 Sum_probs=62.0
Q ss_pred CCCceEEEECc----cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccch
Q 012547 41 GDPLRIVGVGA----GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKY 116 (461)
Q Consensus 41 ~~~mkI~IIGa----GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~ 116 (461)
..+.+|+|||+ +.+|..+...|.+. | ++|+.++...+.+.
T Consensus 2 ~~p~siAVVGaS~~~~~~g~~v~~~L~~~-g-----~~V~pVnP~~~~i~------------------------------ 45 (122)
T 3ff4_A 2 NAMKKTLILGATPETNRYAYLAAERLKSH-G-----HEFIPVGRKKGEVL------------------------------ 45 (122)
T ss_dssp CCCCCEEEETCCSCTTSHHHHHHHHHHHH-T-----CCEEEESSSCSEET------------------------------
T ss_pred CCCCEEEEEccCCCCCCHHHHHHHHHHHC-C-----CeEEEECCCCCcCC------------------------------
Confidence 35678999998 67999999999988 8 77777765533211
Q ss_pred hhhhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEE
Q 012547 117 VEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISL 196 (461)
Q Consensus 117 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~ 196 (461)
+..+..++.+.-. .|++++++|+..+.++++++... .. . .|.+
T Consensus 46 ------------------------------G~~~y~sl~dlp~-vDlavi~~p~~~v~~~v~e~~~~-g~----k-~v~~ 88 (122)
T 3ff4_A 46 ------------------------------GKTIINERPVIEG-VDTVTLYINPQNQLSEYNYILSL-KP----K-RVIF 88 (122)
T ss_dssp ------------------------------TEECBCSCCCCTT-CCEEEECSCHHHHGGGHHHHHHH-CC----S-EEEE
T ss_pred ------------------------------CeeccCChHHCCC-CCEEEEEeCHHHHHHHHHHHHhc-CC----C-EEEE
Confidence 1122223333223 79999999999999999998763 21 2 3568
Q ss_pred eecCccc
Q 012547 197 AKGVEAE 203 (461)
Q Consensus 197 tkGi~~~ 203 (461)
+.|+..+
T Consensus 89 ~~G~~~~ 95 (122)
T 3ff4_A 89 NPGTENE 95 (122)
T ss_dssp CTTCCCH
T ss_pred CCCCChH
Confidence 8898643
No 264
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=96.67 E-value=0.0033 Score=66.43 Aligned_cols=37 Identities=11% Similarity=0.145 Sum_probs=32.6
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhh
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (461)
-++|+|+|+|.+|..+|..+... | .+|+++++++..+
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~-G-----a~Viv~d~~~~~~ 310 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQ-G-----ARVSVTEIDPINA 310 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHH
T ss_pred cCEEEEEccCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHH
Confidence 36899999999999999999877 8 8999999987644
No 265
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=96.67 E-value=0.0015 Score=66.50 Aligned_cols=40 Identities=18% Similarity=0.245 Sum_probs=34.6
Q ss_pred CCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012547 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (461)
Q Consensus 41 ~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (461)
...++|+|+|+|.+|.+++..+... | .+|++|+++++.++
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~-G-----a~V~~~d~~~~~l~ 205 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGM-G-----ATVTVLDINIDKLR 205 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-C-----CEEEEEeCCHHHHH
Confidence 3457999999999999999999887 8 79999999987654
No 266
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=96.66 E-value=0.0036 Score=64.33 Aligned_cols=39 Identities=26% Similarity=0.320 Sum_probs=33.7
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCchhhh
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVD 86 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~-~V~l~~r~~~~~~ 86 (461)
..++|+|||+|.||.+++..+... | . +|++++|+.++++
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~-G-----~~~V~v~~r~~~ra~ 205 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDR-G-----VRAVLVANRTYERAV 205 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHH-C-----CSEEEEECSSHHHHH
T ss_pred cCCEEEEEChHHHHHHHHHHHHHC-C-----CCEEEEEeCCHHHHH
Confidence 346899999999999999999988 8 6 8999999986543
No 267
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=96.66 E-value=0.011 Score=57.32 Aligned_cols=66 Identities=23% Similarity=0.189 Sum_probs=46.7
Q ss_pred cCcccccccchhHHhhHHHHHhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012547 14 SNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (461)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (461)
.+|-++-.|-.-.--+.-|++. |. +-..+++.|+|+|.+|.+++..|++. | .+|++|+|+.++++.
T Consensus 92 ~~g~l~G~ntD~~G~~~~L~~~-~~-~l~~k~vlViGaGg~g~a~a~~L~~~-G-----~~V~v~~R~~~~~~~ 157 (271)
T 1nyt_A 92 EDGRLLGDNTDGVGLLSDLERL-SF-IRPGLRILLIGAGGASRGVLLPLLSL-D-----CAVTITNRTVSRAEE 157 (271)
T ss_dssp TTSCEEEECCHHHHHHHHHHHH-TC-CCTTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSHHHHHH
T ss_pred CCCeEEEeCCCHHHHHHHHHhc-Cc-CcCCCEEEEECCcHHHHHHHHHHHHc-C-----CEEEEEECCHHHHHH
Confidence 4554555554444444445442 22 22346899999999999999999999 8 899999999876554
No 268
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=96.65 E-value=0.012 Score=58.23 Aligned_cols=36 Identities=19% Similarity=0.328 Sum_probs=29.9
Q ss_pred ceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEec--Cch
Q 012547 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRR--PGR 83 (461)
Q Consensus 44 mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r--~~~ 83 (461)
|||+|+|+ |.+|++++..|+.. |.. .++.++++ +++
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~-~~~---~el~L~Di~~~~~ 39 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKE-PFM---KDLVLIGREHSIN 39 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTC-TTC---CEEEEEECGGGHH
T ss_pred CEEEEECCCChhHHHHHHHHHhC-CCC---CEEEEEcCCCchh
Confidence 79999999 99999999999877 631 46899998 543
No 269
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=96.64 E-value=0.012 Score=57.92 Aligned_cols=95 Identities=18% Similarity=0.212 Sum_probs=67.4
Q ss_pred CCCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhh
Q 012547 41 GDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (461)
Q Consensus 41 ~~~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (461)
.+.+||+|+|+ |.||..++..+.+. | ++ .++..++.... ...
T Consensus 5 ~~~~~VaVvGasG~~G~~~~~~l~~~-g-----~~-~v~~VnP~~~g-------------------------~~i----- 47 (288)
T 1oi7_A 5 NRETRVLVQGITGREGQFHTKQMLTY-G-----TK-IVAGVTPGKGG-------------------------MEV----- 47 (288)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHH-T-----CE-EEEEECTTCTT-------------------------CEE-----
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHc-C-----Ce-EEEEECCCCCC-------------------------ceE-----
Confidence 35679999998 99999999999887 7 66 34444442100 000
Q ss_pred hccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhc--CCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEe
Q 012547 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (461)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~--~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~t 197 (461)
.++.+..+++++.+ ++|+++++||+....+++++.... + -..+|..+
T Consensus 48 --------------------------~G~~vy~sl~el~~~~~~Dv~Ii~vp~~~~~~~~~ea~~~---G--i~~vVi~t 96 (288)
T 1oi7_A 48 --------------------------LGVPVYDTVKEAVAHHEVDASIIFVPAPAAADAALEAAHA---G--IPLIVLIT 96 (288)
T ss_dssp --------------------------TTEEEESSHHHHHHHSCCSEEEECCCHHHHHHHHHHHHHT---T--CSEEEECC
T ss_pred --------------------------CCEEeeCCHHHHhhcCCCCEEEEecCHHHHHHHHHHHHHC---C--CCEEEEEC
Confidence 13556677888777 899999999999999999887652 1 13466678
Q ss_pred ecCccc
Q 012547 198 KGVEAE 203 (461)
Q Consensus 198 kGi~~~ 203 (461)
.|+...
T Consensus 97 ~G~~~~ 102 (288)
T 1oi7_A 97 EGIPTL 102 (288)
T ss_dssp SCCCHH
T ss_pred CCCCHH
Confidence 888653
No 270
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=96.64 E-value=0.0037 Score=63.20 Aligned_cols=96 Identities=15% Similarity=0.248 Sum_probs=63.6
Q ss_pred CCceEEEEC-ccHHHHH-HH----HHHHHhcCCCCCCeeE----------EEEecCchhhhhhhhhhHHHHHhhhhhhHH
Q 012547 42 DPLRIVGVG-AGAWGSV-FT----AMLQDSYGYLRDKVLI----------RIWRRPGRSVDRATAEHLFEVINSREDVLR 105 (461)
Q Consensus 42 ~~mkI~IIG-aGamG~a-lA----~~La~~~G~~~~~~~V----------~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~ 105 (461)
+++||+||| +|.||.. .+ ..+... +. ..+ .++++++++++.+.++
T Consensus 5 ~~irigiiG~~G~~g~~~h~~~~~~~~~~~-~~----~~l~~~~~~~~~~av~~~~~~~a~~~a~~-------------- 65 (383)
T 3oqb_A 5 QRLGLIMNGVTGRMGLNQHLIRSIVAIRDQ-GG----VRLKNGDRIMPDPILVGRSAEKVEALAKR-------------- 65 (383)
T ss_dssp EEEEEEEESTTSTHHHHTTTTTTHHHHHHH-TS----EECTTSCEEEEEEEEECSSSHHHHHHHHH--------------
T ss_pred ceeEEEEEeccchhhhhhhHHHHHHHHhhc-Cc----eeecCCcccceeeEEEcCCHHHHHHHHHH--------------
Confidence 458999999 9999998 66 666655 31 222 3899998766532110
Q ss_pred hhhhcccccchhhhhccCCccchhhhhhhcccccCCCCCCCCe-EEecCHHHHhcC--CCEEEEcCCchhHHHHHHHHHH
Q 012547 106 RLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPL-KVVTNLQEAVWD--ADIVINGLPSTETKEVFEEISR 182 (461)
Q Consensus 106 ~~~~n~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i-~~t~dl~~av~~--aDiIIiaVps~~~~~vl~~i~~ 182 (461)
| ++ .+.+|+++.+.+ .|+|++|+|+....+++....
T Consensus 66 -------~---------------------------------~~~~~~~~~~~ll~~~~iD~V~i~tp~~~h~~~~~~al- 104 (383)
T 3oqb_A 66 -------F---------------------------------NIARWTTDLDAALADKNDTMFFDAATTQARPGLLTQAI- 104 (383)
T ss_dssp -------T---------------------------------TCCCEESCHHHHHHCSSCCEEEECSCSSSSHHHHHHHH-
T ss_pred -------h---------------------------------CCCcccCCHHHHhcCCCCCEEEECCCchHHHHHHHHHH-
Confidence 0 11 346788887755 799999999887777665543
Q ss_pred HhhccCCCCEEEEEeecCccc
Q 012547 183 YWKERITVPVIISLAKGVEAE 203 (461)
Q Consensus 183 ~l~~~~~~~iIIs~tkGi~~~ 203 (461)
.. +..|+ +-|.+...
T Consensus 105 --~~---Gk~V~-~EKP~a~~ 119 (383)
T 3oqb_A 105 --NA---GKHVY-CEKPIATN 119 (383)
T ss_dssp --TT---TCEEE-ECSCSCSS
T ss_pred --HC---CCeEE-EcCCCCCC
Confidence 33 44444 78876543
No 271
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=96.63 E-value=0.007 Score=60.48 Aligned_cols=100 Identities=14% Similarity=0.057 Sum_probs=64.5
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCC--CCCCee-EEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGY--LRDKVL-IRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~--~~~~~~-V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
.||+|||+|.||...+..+....+. +....+ |-+++++++.+++..++ | .
T Consensus 7 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~---------------------~-g----- 59 (390)
T 4h3v_A 7 LGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGK---------------------L-G----- 59 (390)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHH---------------------H-T-----
T ss_pred CcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHH---------------------c-C-----
Confidence 4899999999999888777654110 000023 44778888765542110 0 0
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhc--CCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEee
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~--~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tk 198 (461)
-..+.+|+++.+. +.|+|++|+|+....+++..... . +.. |.|-|
T Consensus 60 --------------------------~~~~~~d~~~ll~~~~iDaV~I~tP~~~H~~~~~~al~---a---Gkh-Vl~EK 106 (390)
T 4h3v_A 60 --------------------------WSTTETDWRTLLERDDVQLVDVCTPGDSHAEIAIAALE---A---GKH-VLCEK 106 (390)
T ss_dssp --------------------------CSEEESCHHHHTTCTTCSEEEECSCGGGHHHHHHHHHH---T---TCE-EEEES
T ss_pred --------------------------CCcccCCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHH---c---CCC-ceeec
Confidence 1145678888775 47999999999988887766543 2 333 45888
Q ss_pred cCccc
Q 012547 199 GVEAE 203 (461)
Q Consensus 199 Gi~~~ 203 (461)
-+...
T Consensus 107 Pla~t 111 (390)
T 4h3v_A 107 PLANT 111 (390)
T ss_dssp SSCSS
T ss_pred Ccccc
Confidence 88764
No 272
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=96.63 E-value=0.0031 Score=61.52 Aligned_cols=61 Identities=18% Similarity=0.211 Sum_probs=44.2
Q ss_pred CcccccccchhHHhhHHHHHhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012547 15 NGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (461)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (461)
+|-++-.|-.-.-=+.-|+. .| .+++.|||+|.+|.+++..|++. | .+|++++|+.+++++
T Consensus 96 ~g~l~G~NTD~~Gf~~~L~~-~~-----~k~vlvlGaGGaaraia~~L~~~-G-----~~v~V~nRt~~ka~~ 156 (269)
T 3phh_A 96 NDELVGYNTDALGFYLSLKQ-KN-----YQNALILGAGGSAKALACELKKQ-G-----LQVSVLNRSSRGLDF 156 (269)
T ss_dssp TTEEEEECCHHHHHHHHCC---------CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCTTHHH
T ss_pred CCEEEEecChHHHHHHHHHH-cC-----CCEEEEECCCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHH
Confidence 56555555544333333333 22 46899999999999999999998 8 899999999887654
No 273
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=96.62 E-value=0.0042 Score=61.02 Aligned_cols=65 Identities=17% Similarity=0.032 Sum_probs=45.4
Q ss_pred CcccccccchhHHhhHHHHHhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCchhhhh
Q 012547 15 NGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPGRSVDR 87 (461)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~-~V~l~~r~~~~~~~ 87 (461)
+|-++-.|-.-.-=+.-|+.. | .+....++.|+|+|.+|.+++..|++. | . +|++++|+.+++++
T Consensus 96 ~g~l~G~NTD~~G~~~~L~~~-~-~~~~~k~vlvlGaGGaaraia~~L~~~-G-----~~~v~v~nRt~~ka~~ 161 (282)
T 3fbt_A 96 REGISGFNTDYIGFGKMLSKF-R-VEIKNNICVVLGSGGAARAVLQYLKDN-F-----AKDIYVVTRNPEKTSE 161 (282)
T ss_dssp SSCEEEECCHHHHHHHHHHHT-T-CCCTTSEEEEECSSTTHHHHHHHHHHT-T-----CSEEEEEESCHHHHHH
T ss_pred CCEEEeeCCcHHHHHHHHHHc-C-CCccCCEEEEECCcHHHHHHHHHHHHc-C-----CCEEEEEeCCHHHHHH
Confidence 565555554443333444432 2 223447899999999999999999998 8 5 89999999876553
No 274
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=96.60 E-value=0.0023 Score=64.34 Aligned_cols=93 Identities=23% Similarity=0.218 Sum_probs=64.2
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhccC
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGD 123 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~~ 123 (461)
++|+|||.|.+|..+|..+..- | .+|..|++...... ..
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~f-g-----~~v~~~d~~~~~~~----------------------------~~------- 180 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAF-G-----MKVLCYDVVKREDL----------------------------KE------- 180 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCCHHH----------------------------HH-------
T ss_pred cEEEEECcchHHHHHHHhhccc-C-----ceeeecCCccchhh----------------------------hh-------
Confidence 6899999999999999998766 7 89999998653110 00
Q ss_pred CccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCc-hhHHHHH-HHHHHHhhccCCCCEEEEEeecCc
Q 012547 124 RTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPS-TETKEVF-EEISRYWKERITVPVIISLAKGVE 201 (461)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps-~~~~~vl-~~i~~~l~~~~~~~iIIs~tkGi~ 201 (461)
..+. ..++++.++.||+|.+.+|- ..++.++ ++....+++ ++++|.++-|=.
T Consensus 181 ----------------------~~~~-~~~l~ell~~sDivslh~Plt~~T~~li~~~~l~~mk~---~a~lIN~aRG~i 234 (334)
T 3kb6_A 181 ----------------------KGCV-YTSLDELLKESDVISLHVPYTKETHHMINEERISLMKD---GVYLINTARGKV 234 (334)
T ss_dssp ----------------------TTCE-ECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCT---TEEEEECSCGGG
T ss_pred ----------------------cCce-ecCHHHHHhhCCEEEEcCCCChhhccCcCHHHHhhcCC---CeEEEecCcccc
Confidence 0122 24678889999999999994 3444443 222334555 688888887744
Q ss_pred cc
Q 012547 202 AE 203 (461)
Q Consensus 202 ~~ 203 (461)
.+
T Consensus 235 Vd 236 (334)
T 3kb6_A 235 VD 236 (334)
T ss_dssp BC
T ss_pred cc
Confidence 43
No 275
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=96.60 E-value=0.0074 Score=60.59 Aligned_cols=40 Identities=13% Similarity=0.309 Sum_probs=31.3
Q ss_pred CCceEEEEC-ccHHHHHHHHHHHHhcCCCCC--CeeEEEEecCc
Q 012547 42 DPLRIVGVG-AGAWGSVFTAMLQDSYGYLRD--KVLIRIWRRPG 82 (461)
Q Consensus 42 ~~mkI~IIG-aGamG~alA~~La~~~G~~~~--~~~V~l~~r~~ 82 (461)
.+|||+|+| +|.+|+++|..|+.. |.+.. ...+.++|+++
T Consensus 2 ~~~kV~V~GaaG~VG~~la~~L~~~-~~~~e~~~~~l~L~Di~~ 44 (333)
T 5mdh_A 2 EPIRVLVTGAAGQIAYSLLYSIGNG-SVFGKDQPIILVLLDITP 44 (333)
T ss_dssp CCEEEEESSTTSHHHHTTHHHHHTT-TTTCTTCCEEEEEECCGG
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhC-CCccccCCCEEEEEeCCC
Confidence 468999999 799999999999987 64321 12488999875
No 276
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=96.58 E-value=0.011 Score=61.66 Aligned_cols=68 Identities=22% Similarity=0.210 Sum_probs=45.8
Q ss_pred cccccccCcccccccchhHHhhHHHHHhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 8 VNDSLSSNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
||||...... ..--|.-+.-+|.++|..|.. ..-++|+|||.|.+|..+|..+..- | .+|+++++++.
T Consensus 214 Vnds~tK~~f-Dn~yG~~eslvdgI~Ratg~~-L~GKTVgVIG~G~IGr~vA~~lraf-G-----a~Viv~d~dp~ 281 (464)
T 3n58_A 214 VNDSVTKSKF-DNKYGCKESLVDGIRRGTDVM-MAGKVAVVCGYGDVGKGSAQSLAGA-G-----ARVKVTEVDPI 281 (464)
T ss_dssp CTTSHHHHTT-HHHHHHHHHHHHHHHHHHCCC-CTTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSHH
T ss_pred eccHhhhhhh-hhhhcchHHHHHHHHHhcCCc-ccCCEEEEECcCHHHHHHHHHHHHC-C-----CEEEEEeCCcc
Confidence 5776653221 111122233456777766533 2336899999999999999999876 7 89999998864
No 277
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=96.57 E-value=0.0025 Score=64.66 Aligned_cols=40 Identities=18% Similarity=0.270 Sum_probs=34.9
Q ss_pred CCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012547 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (461)
Q Consensus 41 ~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (461)
...++|+|+|+|.+|.+++..+... | .+|++++|++++++
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~~-G-----a~V~~~d~~~~~~~ 203 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALGM-G-----AQVTILDVNHKRLQ 203 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-C-----CEEEEEECCHHHHH
Confidence 3458999999999999999999988 8 89999999986554
No 278
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=96.54 E-value=0.008 Score=55.35 Aligned_cols=38 Identities=24% Similarity=0.309 Sum_probs=32.8
Q ss_pred Cce-EEEECc-cHHHHHHHHHHH-HhcCCCCCCeeEEEEecCch-hhh
Q 012547 43 PLR-IVGVGA-GAWGSVFTAMLQ-DSYGYLRDKVLIRIWRRPGR-SVD 86 (461)
Q Consensus 43 ~mk-I~IIGa-GamG~alA~~La-~~~G~~~~~~~V~l~~r~~~-~~~ 86 (461)
||| |.|.|+ |.+|.+++..|+ +. | ++|++++|+++ .++
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~-g-----~~V~~~~r~~~~~~~ 45 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYT-D-----MHITLYGRQLKTRIP 45 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHC-C-----CEEEEEESSHHHHSC
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcC-C-----ceEEEEecCccccch
Confidence 455 999995 999999999999 77 7 99999999987 554
No 279
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=96.52 E-value=0.0047 Score=64.06 Aligned_cols=68 Identities=24% Similarity=0.225 Sum_probs=46.2
Q ss_pred cccccccCcccccccchhHHhhHHHHHhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 8 VNDSLSSNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
||||..... ....-|.-+.-++-++|..+..- .-++|+|+|+|.+|..+|..+... | .+|.++++++.
T Consensus 187 vnds~tK~~-fDn~yGt~~s~~~gi~rat~~~L-~GktV~ViG~G~IGk~vA~~Lra~-G-----a~Viv~D~dp~ 254 (435)
T 3gvp_A 187 VNDSVTKQK-FDNLYCCRESILDGLKRTTDMMF-GGKQVVVCGYGEVGKGCCAALKAM-G-----SIVYVTEIDPI 254 (435)
T ss_dssp CTTCHHHHH-HHTHHHHHHHHHHHHHHHHCCCC-TTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHH
T ss_pred ecchhhhhh-hhhhhhhHHHHHHHHHHhhCcee-cCCEEEEEeeCHHHHHHHHHHHHC-C-----CEEEEEeCChh
Confidence 566654321 11111333455677777765322 236899999999999999999877 7 78999998874
No 280
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=96.51 E-value=0.0032 Score=64.89 Aligned_cols=40 Identities=18% Similarity=0.175 Sum_probs=34.9
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (461)
...||+|||+|.+|..+|..+... | .+|++|++++++++.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l-G-----a~V~v~D~~~~~l~~ 228 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL-G-----AVVSATDVRPAAKEQ 228 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSTTHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC-C-----CEEEEEcCCHHHHHH
Confidence 457999999999999999998877 8 899999999876553
No 281
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=96.39 E-value=0.013 Score=58.94 Aligned_cols=42 Identities=12% Similarity=0.153 Sum_probs=30.7
Q ss_pred CHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecC
Q 012547 153 NLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 153 dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi 200 (461)
+.++...++|+||+|+|...-++++.++. .. +..+|.++.-+
T Consensus 68 ~~~~~~~~~Dvvf~a~p~~~s~~~~~~~~---~~---g~~vIDlSa~f 109 (337)
T 3dr3_A 68 DISEFSPGVDVVFLATAHEVSHDLAPQFL---EA---GCVVFDLSGAF 109 (337)
T ss_dssp SGGGTCTTCSEEEECSCHHHHHHHHHHHH---HT---TCEEEECSSTT
T ss_pred CHHHHhcCCCEEEECCChHHHHHHHHHHH---HC---CCEEEEcCCcc
Confidence 44443378999999999988888777664 33 67788877544
No 282
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=96.39 E-value=0.022 Score=56.14 Aligned_cols=100 Identities=14% Similarity=0.163 Sum_probs=68.2
Q ss_pred hcCCCCCCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhccccc
Q 012547 36 MGKAEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYL 114 (461)
Q Consensus 36 ~~~~~~~~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l 114 (461)
|...-....+|+|+|+ |.||..++..+.+. | ++ .++..++.... ...
T Consensus 6 ~~~l~~~~~~vvV~Gasg~~G~~~~~~l~~~-g-----~~-~v~~VnP~~~g-------------------------~~i 53 (297)
T 2yv2_A 6 MAVLVDSETRVLVQGITGREGSFHAKAMLEY-G-----TK-VVAGVTPGKGG-------------------------SEV 53 (297)
T ss_dssp ---CCSTTCEEEEETTTSHHHHHHHHHHHHH-T-----CE-EEEEECTTCTT-------------------------CEE
T ss_pred hhHhhCCCCEEEEECCCCCHHHHHHHHHHhC-C-----Cc-EEEEeCCCCCC-------------------------ceE
Confidence 3444455678999998 99999999998887 7 66 45555542100 000
Q ss_pred chhhhhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhc--C-CCEEEEcCCchhHHHHHHHHHHHhhccCCCC
Q 012547 115 KYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--D-ADIVINGLPSTETKEVFEEISRYWKERITVP 191 (461)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~--~-aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~ 191 (461)
.++.+..+++++.. . +|+++++||+....+++++.... . -.
T Consensus 54 -------------------------------~G~~vy~sl~el~~~~~~~DvaIi~vp~~~~~~~v~ea~~~-G----i~ 97 (297)
T 2yv2_A 54 -------------------------------HGVPVYDSVKEALAEHPEINTSIVFVPAPFAPDAVYEAVDA-G----IR 97 (297)
T ss_dssp -------------------------------TTEEEESSHHHHHHHCTTCCEEEECCCGGGHHHHHHHHHHT-T----CS
T ss_pred -------------------------------CCEeeeCCHHHHhhcCCCCCEEEEecCHHHHHHHHHHHHHC-C----CC
Confidence 03556677887765 5 99999999999999999887753 1 23
Q ss_pred EEEEEeecCccc
Q 012547 192 VIISLAKGVEAE 203 (461)
Q Consensus 192 iIIs~tkGi~~~ 203 (461)
.+|.++.|+...
T Consensus 98 ~vVi~t~G~~~~ 109 (297)
T 2yv2_A 98 LVVVITEGIPVH 109 (297)
T ss_dssp EEEECCCCCCHH
T ss_pred EEEEECCCCCHH
Confidence 466678898653
No 283
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=96.37 E-value=0.013 Score=57.27 Aligned_cols=45 Identities=9% Similarity=0.161 Sum_probs=30.5
Q ss_pred cCHHHHhc--CCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecCccc
Q 012547 152 TNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEAE 203 (461)
Q Consensus 152 ~dl~~av~--~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~~~ 203 (461)
+|+++.+. +.|+|++|+|+....+++.... .. +..|+ +-|-+...
T Consensus 55 ~~~~ell~~~~vD~V~i~tp~~~H~~~~~~al---~a---GkhVl-~EKPla~~ 101 (294)
T 1lc0_A 55 ISLEDALRSQEIDVAYICSESSSHEDYIRQFL---QA---GKHVL-VEYPMTLS 101 (294)
T ss_dssp CCHHHHHHCSSEEEEEECSCGGGHHHHHHHHH---HT---TCEEE-EESCSCSC
T ss_pred CCHHHHhcCCCCCEEEEeCCcHhHHHHHHHHH---HC---CCcEE-EeCCCCCC
Confidence 57777765 6799999999988777665543 33 44444 57766543
No 284
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=96.36 E-value=0.014 Score=62.19 Aligned_cols=55 Identities=27% Similarity=0.329 Sum_probs=35.9
Q ss_pred HHhhHHHHHhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012547 26 EERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (461)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (461)
.+.+++|+..+|..... ++|.|+|+|.+|..+|..|.+. | ++|.+++.+++.++.
T Consensus 332 ~~~l~~~~~~~~~~~~~-~~viIiG~G~~G~~la~~L~~~-g-----~~v~vid~d~~~~~~ 386 (565)
T 4gx0_A 332 KSQLAALEYLIGEAPED-ELIFIIGHGRIGCAAAAFLDRK-P-----VPFILIDRQESPVCN 386 (565)
T ss_dssp ---------------CC-CCEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESSCCSSCC
T ss_pred HHHHHHHHHHhcCCCCC-CCEEEECCCHHHHHHHHHHHHC-C-----CCEEEEECChHHHhh
Confidence 35567788888766544 8999999999999999999998 7 999999999986653
No 285
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=96.32 E-value=0.026 Score=55.89 Aligned_cols=94 Identities=17% Similarity=0.186 Sum_probs=66.3
Q ss_pred CCceEEEE-Cc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhh
Q 012547 42 DPLRIVGV-GA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEA 119 (461)
Q Consensus 42 ~~mkI~II-Ga-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~ 119 (461)
++.+|+|| |+ |.+|...+..|.+. | ++ .++..++..... ..
T Consensus 12 ~~~siaVV~Gasg~~G~~~~~~l~~~-G-----~~-~v~~VnP~~~g~-------------------------~i----- 54 (305)
T 2fp4_A 12 DKNTKVICQGFTGKQGTFHSQQALEY-G-----TN-LVGGTTPGKGGK-------------------------TH----- 54 (305)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHH-T-----CE-EEEEECTTCTTC-------------------------EE-----
T ss_pred CCCcEEEEECCCCCHHHHHHHHHHHC-C-----Cc-EEEEeCCCcCcc-------------------------eE-----
Confidence 34568888 98 99999999999888 8 66 445555531100 00
Q ss_pred hccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhc--CCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEe
Q 012547 120 RLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLA 197 (461)
Q Consensus 120 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~--~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~t 197 (461)
.++.+..+++++.+ ++|+++++||+....++++++... . -..++.++
T Consensus 55 --------------------------~G~~vy~sl~el~~~~~vD~avI~vP~~~~~~~~~e~i~~-G----i~~iv~~t 103 (305)
T 2fp4_A 55 --------------------------LGLPVFNTVKEAKEQTGATASVIYVPPPFAAAAINEAIDA-E----VPLVVCIT 103 (305)
T ss_dssp --------------------------TTEEEESSHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHT-T----CSEEEECC
T ss_pred --------------------------CCeeeechHHHhhhcCCCCEEEEecCHHHHHHHHHHHHHC-C----CCEEEEEC
Confidence 03455667888777 899999999999999999887652 1 13567788
Q ss_pred ecCccc
Q 012547 198 KGVEAE 203 (461)
Q Consensus 198 kGi~~~ 203 (461)
.|+...
T Consensus 104 ~G~~~~ 109 (305)
T 2fp4_A 104 EGIPQQ 109 (305)
T ss_dssp CCCCHH
T ss_pred CCCChH
Confidence 888643
No 286
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=96.32 E-value=0.0036 Score=63.78 Aligned_cols=95 Identities=11% Similarity=0.128 Sum_probs=58.4
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeE-EEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
.+.||+|||+| ||...+..+++. . ++.++ -+++++.++++++.++ |
T Consensus 6 ~~~rv~VvG~G-~g~~h~~a~~~~-~---~~~elvav~~~~~~~a~~~a~~---------------------~------- 52 (372)
T 4gmf_A 6 PKQRVLIVGAK-FGEMYLNAFMQP-P---EGLELVGLLAQGSARSRELAHA---------------------F------- 52 (372)
T ss_dssp -CEEEEEECST-TTHHHHHTTSSC-C---TTEEEEEEECCSSHHHHHHHHH---------------------T-------
T ss_pred CCCEEEEEehH-HHHHHHHHHHhC-C---CCeEEEEEECCCHHHHHHHHHH---------------------h-------
Confidence 46899999999 898777766543 1 11454 4788988766542110 1
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhH----HHHHHHHHHHhhccCCCCEEEEE
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTET----KEVFEEISRYWKERITVPVIISL 196 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~----~~vl~~i~~~l~~~~~~~iIIs~ 196 (461)
++...+|.++.+.+.|+++++||+... .++..+. +.. +.. |.+
T Consensus 53 --------------------------gv~~~~~~~~l~~~~D~v~i~~p~~~h~~~~~~~a~~a---l~a---Gkh-Vl~ 99 (372)
T 4gmf_A 53 --------------------------GIPLYTSPEQITGMPDIACIVVRSTVAGGAGTQLARHF---LAR---GVH-VIQ 99 (372)
T ss_dssp --------------------------TCCEESSGGGCCSCCSEEEECCC--CTTSHHHHHHHHH---HHT---TCE-EEE
T ss_pred --------------------------CCCEECCHHHHhcCCCEEEEECCCcccchhHHHHHHHH---HHc---CCc-EEE
Confidence 233457788888889999999998754 3444333 343 333 447
Q ss_pred eecCcc
Q 012547 197 AKGVEA 202 (461)
Q Consensus 197 tkGi~~ 202 (461)
-|-+..
T Consensus 100 EKPl~~ 105 (372)
T 4gmf_A 100 EHPLHP 105 (372)
T ss_dssp ESCCCH
T ss_pred ecCCCH
Confidence 777644
No 287
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=96.30 E-value=0.016 Score=58.02 Aligned_cols=110 Identities=13% Similarity=0.090 Sum_probs=61.4
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeE-EEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLI-RIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARL 121 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V-~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l 121 (461)
++||+|+|+|.+|..++..|... . ..++ .+.+++.+.+.. ..+..+- ..| + ++
T Consensus 2 ~irVgIiG~G~iG~~~~r~l~~~-~----~~elvav~d~~~~~~~~--------~~~~~g~--------~~~-~----~~ 55 (334)
T 2czc_A 2 KVKVGVNGYGTIGKRVAYAVTKQ-D----DMELIGITKTKPDFEAY--------RAKELGI--------PVY-A----AS 55 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC-T----TEEEEEEEESSCSHHHH--------HHHHTTC--------CEE-E----SS
T ss_pred CcEEEEEeEhHHHHHHHHHHhcC-C----CCEEEEEEcCCHHHHHH--------HHHhcCc--------ccc-c----cc
Confidence 36999999999999999998865 2 1454 456666544332 1111000 000 0 00
Q ss_pred cCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecC
Q 012547 122 GDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 122 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi 200 (461)
+.. + +.+.+ ..+.+..|+++.+.++|+|++|+|.....+.... +++. +..|+ +.++.
T Consensus 56 ~~~-v---~~~~~-----------~~~~v~~d~~~l~~~vDvV~~aTp~~~h~~~a~~---~l~a---Gk~Vi-~sap~ 112 (334)
T 2czc_A 56 EEF-I---PRFEK-----------EGFEVAGTLNDLLEKVDIIVDATPGGIGAKNKPL---YEKA---GVKAI-FQGGE 112 (334)
T ss_dssp GGG-H---HHHHH-----------HTCCCSCBHHHHHTTCSEEEECCSTTHHHHHHHH---HHHH---TCEEE-ECTTS
T ss_pred ccc-c---eeccC-----------CceEEcCcHHHhccCCCEEEECCCccccHHHHHH---HHHc---CCceE-eeccc
Confidence 000 0 00000 0223456788877899999999999876665553 3444 44555 56554
No 288
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=96.28 E-value=0.014 Score=56.79 Aligned_cols=67 Identities=19% Similarity=0.049 Sum_probs=46.7
Q ss_pred cCcccccccchhHHhhHH-HHHhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012547 14 SNGLIHHTNGSLEERLDE-LRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (461)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (461)
.+|-++-.|-.-.--+.- |+.. |. +....++.|+|+|.+|.+++..|++. |. .+|++++|+.+++++
T Consensus 92 ~~g~l~G~NTD~~G~~~~lL~~~-~~-~l~~k~~lvlGaGg~~~aia~~L~~~-G~----~~v~i~~R~~~~a~~ 159 (272)
T 3pwz_A 92 EDGRIVAENFDGIGLLRDIEENL-GE-PLRNRRVLLLGAGGAVRGALLPFLQA-GP----SELVIANRDMAKALA 159 (272)
T ss_dssp ETTEEEEECCHHHHHHHHHHTTS-CC-CCTTSEEEEECCSHHHHHHHHHHHHT-CC----SEEEEECSCHHHHHH
T ss_pred cCCeEEEecCCHHHHHHHHHHHc-CC-CccCCEEEEECccHHHHHHHHHHHHc-CC----CEEEEEeCCHHHHHH
Confidence 356566666554443333 4332 21 22347899999999999999999998 71 389999999877654
No 289
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.23 E-value=0.0064 Score=62.45 Aligned_cols=42 Identities=17% Similarity=0.203 Sum_probs=34.0
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (461)
|+||+|+|+|.+|.+++..|++. |.+. .+|.+++|+.+++++
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~-g~~~--~~V~v~~r~~~~~~~ 42 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMN-REVF--SHITLASRTLSKCQE 42 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTC-TTTC--CEEEEEESCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCCc--eEEEEEECCHHHHHH
Confidence 36999999999999999999987 6100 289999999887664
No 290
>3h2z_A Mannitol-1-phosphate 5-dehydrogenase; PSI- protein structure initiative, structural genomics, midwest for structural genomics (MCSG); 1.90A {Shigella flexneri 2a str}
Probab=96.22 E-value=0.0054 Score=62.77 Aligned_cols=117 Identities=17% Similarity=0.242 Sum_probs=72.9
Q ss_pred ceEEEECccHHHHH-HHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhhcc
Q 012547 44 LRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLG 122 (461)
Q Consensus 44 mkI~IIGaGamG~a-lA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~l~ 122 (461)
||+..+|+|++|.+ ++..|.++ | ++|++.++++..++++++++ .|...+. +
T Consensus 1 mkavhfGaGniGRGfig~~l~~~-g-----~~v~f~dv~~~~i~~Ln~~~-------------------~Y~V~~~---g 52 (382)
T 3h2z_A 1 MKALHFGAGNIGRGFIGKLLADA-G-----IQLTFADVNQVVLDALNARH-------------------SYQVHVV---G 52 (382)
T ss_dssp CEEEEECCSHHHHHTHHHHHHHT-T-----CEEEEEESCHHHHHHHHHHS-------------------EEEEEEE---S
T ss_pred CcEEEECCCccchhhHHHHHHHc-C-----CeEEEEeCCHHHHHHHhcCC-------------------CEEEEEc---c
Confidence 79999999999955 55567777 7 89999999998877755432 1322110 0
Q ss_pred CCccchhhhhhhcccccCCCCCCCCeEEe----cCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhc----cC-CCCEE
Q 012547 123 DRTLHADEILKDGFCLNMIDTPLCPLKVV----TNLQEAVWDADIVINGLPSTETKEVFEEISRYWKE----RI-TVPVI 193 (461)
Q Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~t----~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~----~~-~~~iI 193 (461)
...- . . ...++.+. .+.-+++.++|+|..++.+...+.+...|...|.. +. +.-.|
T Consensus 53 ~~~~--------~---~----~v~~v~ai~s~~~~~~~~i~~adlitT~vG~~~l~~i~~~l~~~L~~R~~~~~~~plti 117 (382)
T 3h2z_A 53 ETEQ--------V---D----TVSGVNAVSSIGDDVVDLIAQVDLVTTAVGPVVLERIAPAIAKGLVKRKEQGNESPLNI 117 (382)
T ss_dssp SSEE--------E---E----EEESCEEEETTSSHHHHHHTTCSEEEECCCHHHHHHTHHHHHHHHHHHHHHTCCSCEEE
T ss_pred CCcc--------e---E----EEEEEEEEeCcHHHHHHHHcCCCEEEECCCcccHHHHHHHHHHHHHHHHHcCCCCCcEE
Confidence 0000 0 0 00133331 12344678999999999998888888777765532 11 13357
Q ss_pred EEEeecCccc
Q 012547 194 ISLAKGVEAE 203 (461)
Q Consensus 194 Is~tkGi~~~ 203 (461)
++|-|-....
T Consensus 118 lsCeN~~~ng 127 (382)
T 3h2z_A 118 IACENMVRGT 127 (382)
T ss_dssp EECCSSTTHH
T ss_pred EECCCccchH
Confidence 8888766543
No 291
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=96.21 E-value=0.025 Score=55.71 Aligned_cols=94 Identities=17% Similarity=0.193 Sum_probs=67.3
Q ss_pred CCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhhhh
Q 012547 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEAR 120 (461)
Q Consensus 42 ~~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~~~ 120 (461)
...+|+|+|+ |.||..++..+.+. | ++ .++..++.... ...
T Consensus 12 ~~~~v~V~Gasg~~G~~~~~~l~~~-g-----~~-~V~~VnP~~~g-------------------------~~i------ 53 (294)
T 2yv1_A 12 ENTKAIVQGITGRQGSFHTKKMLEC-G-----TK-IVGGVTPGKGG-------------------------QNV------ 53 (294)
T ss_dssp TTCCEEEETTTSHHHHHHHHHHHHT-T-----CC-EEEEECTTCTT-------------------------CEE------
T ss_pred CCCEEEEECCCCCHHHHHHHHHHhC-C-----Ce-EEEEeCCCCCC-------------------------ceE------
Confidence 4568999998 99999999998887 7 56 55555543110 000
Q ss_pred ccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhc--CCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEee
Q 012547 121 LGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (461)
Q Consensus 121 l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~--~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tk 198 (461)
.++.+..+++++.+ ++|+++++||+....+++++.... . -..+|.++.
T Consensus 54 -------------------------~G~~vy~sl~el~~~~~~Dv~ii~vp~~~~~~~v~ea~~~-G----i~~vVi~t~ 103 (294)
T 2yv1_A 54 -------------------------HGVPVFDTVKEAVKETDANASVIFVPAPFAKDAVFEAIDA-G----IELIVVITE 103 (294)
T ss_dssp -------------------------TTEEEESSHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHT-T----CSEEEECCS
T ss_pred -------------------------CCEeeeCCHHHHhhcCCCCEEEEccCHHHHHHHHHHHHHC-C----CCEEEEECC
Confidence 03556678888777 899999999999999999887653 1 234666788
Q ss_pred cCccc
Q 012547 199 GVEAE 203 (461)
Q Consensus 199 Gi~~~ 203 (461)
|+...
T Consensus 104 G~~~~ 108 (294)
T 2yv1_A 104 HIPVH 108 (294)
T ss_dssp CCCHH
T ss_pred CCCHH
Confidence 98653
No 292
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=96.18 E-value=0.021 Score=56.94 Aligned_cols=64 Identities=17% Similarity=0.195 Sum_probs=42.7
Q ss_pred CcccccccchhHHhhHHHHHhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecC---chhhh
Q 012547 15 NGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRP---GRSVD 86 (461)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~-~V~l~~r~---~~~~~ 86 (461)
+|-++-.|-.-.-=+.-|+.. | .+....++.|+|+|.+|.+++..|++. | . +|++++|+ .++++
T Consensus 128 ~g~l~G~NTD~~Gf~~~L~~~-~-~~l~gk~~lVlGaGG~g~aia~~L~~~-G-----a~~V~i~nR~~~~~~~a~ 195 (315)
T 3tnl_A 128 DGVLTGHITDGTGYMRALKEA-G-HDIIGKKMTICGAGGAATAICIQAALD-G-----VKEISIFNRKDDFYANAE 195 (315)
T ss_dssp TTEEEEECCHHHHHHHHHHHT-T-CCCTTSEEEEECCSHHHHHHHHHHHHT-T-----CSEEEEEECSSTTHHHHH
T ss_pred CCEEEEeCCCHHHHHHHHHHc-C-CCccCCEEEEECCChHHHHHHHHHHHC-C-----CCEEEEEECCCchHHHHH
Confidence 454443443333333334431 2 223346899999999999999999998 8 5 89999999 55444
No 293
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=96.13 E-value=0.011 Score=60.54 Aligned_cols=107 Identities=23% Similarity=0.244 Sum_probs=68.0
Q ss_pred hhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecC----chhhhh-hhhhhHHHHHhhhhhhHHhhhh
Q 012547 35 LMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRP----GRSVDR-ATAEHLFEVINSREDVLRRLIR 109 (461)
Q Consensus 35 ~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~----~~~~~~-~~~~~l~~~i~~~~~~~~~~~~ 109 (461)
+.|+ +-...||.|+|+|++|.++|..|... |. .+|++++|+ .++.+. ++. +.+.
T Consensus 185 i~g~-~l~~~kVVv~GAGaAG~~iAkll~~~-G~----~~I~v~Dr~Gli~~~R~~~~L~~--~k~~------------- 243 (388)
T 1vl6_A 185 LTEK-KIEEVKVVVNGIGAAGYNIVKFLLDL-GV----KNVVAVDRKGILNENDPETCLNE--YHLE------------- 243 (388)
T ss_dssp HHTC-CTTTCEEEEECCSHHHHHHHHHHHHH-TC----CEEEEEETTEECCTTSGGGCSSH--HHHH-------------
T ss_pred HhCC-CCCCcEEEEECCCHHHHHHHHHHHhC-CC----CeEEEEECCCcccCCCcccccCH--HHHH-------------
Confidence 4454 44568999999999999999999988 81 489999998 433110 100 0000
Q ss_pred cccccchhhhhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCC-chhHHHHHHHHHHHhhccC
Q 012547 110 RCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLP-STETKEVFEEISRYWKERI 188 (461)
Q Consensus 110 n~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVp-s~~~~~vl~~i~~~l~~~~ 188 (461)
+.. .. .......+++++++++|++|=+.. .-..++++++++ +
T Consensus 244 ----~A~--------~~-------------------~~~~~~~~L~eav~~ADVlIG~Sap~l~t~emVk~Ma----~-- 286 (388)
T 1vl6_A 244 ----IAR--------IT-------------------NPERLSGDLETALEGADFFIGVSRGNILKPEWIKKMS----R-- 286 (388)
T ss_dssp ----HHH--------TS-------------------CTTCCCSCHHHHHTTCSEEEECSCSSCSCHHHHTTSC----S--
T ss_pred ----HHH--------hh-------------------hccCchhhHHHHHccCCEEEEeCCCCccCHHHHHhcC----C--
Confidence 000 00 011124678999999999888764 345666666654 3
Q ss_pred CCCEEEEEeecC
Q 012547 189 TVPVIISLAKGV 200 (461)
Q Consensus 189 ~~~iIIs~tkGi 200 (461)
+.+|+.++|-.
T Consensus 287 -~pIIfalSNPt 297 (388)
T 1vl6_A 287 -KPVIFALANPV 297 (388)
T ss_dssp -SCEEEECCSSS
T ss_pred -CCEEEEcCCCC
Confidence 46787777754
No 294
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=96.05 E-value=0.011 Score=58.64 Aligned_cols=48 Identities=15% Similarity=0.058 Sum_probs=34.3
Q ss_pred EEecCHHHHhc--CCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecCccc
Q 012547 149 KVVTNLQEAVW--DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEAE 203 (461)
Q Consensus 149 ~~t~dl~~av~--~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~~~ 203 (461)
.+.+|+++.+. +.|+|++|+|.....+++..... . +.. |.+-|-+...
T Consensus 54 ~~~~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~---a---Gkh-Vl~EKPla~~ 103 (337)
T 3ip3_A 54 KKYNNWWEMLEKEKPDILVINTVFSLNGKILLEALE---R---KIH-AFVEKPIATT 103 (337)
T ss_dssp EECSSHHHHHHHHCCSEEEECSSHHHHHHHHHHHHH---T---TCE-EEECSSSCSS
T ss_pred cccCCHHHHhcCCCCCEEEEeCCcchHHHHHHHHHH---C---CCc-EEEeCCCCCC
Confidence 45688888775 48999999999888777666543 3 344 4478877654
No 295
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=96.04 E-value=0.038 Score=53.07 Aligned_cols=38 Identities=16% Similarity=0.093 Sum_probs=26.1
Q ss_pred CCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecCccc
Q 012547 160 DADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEAE 203 (461)
Q Consensus 160 ~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~~~ 203 (461)
++|+||-++++..+.+.++.... . +..+|..+.|+..+
T Consensus 45 ~~DvvIDfT~p~a~~~~~~~a~~---~---g~~~VigTTG~~~e 82 (245)
T 1p9l_A 45 NTEVVIDFTHPDVVMGNLEFLID---N---GIHAVVGTTGFTAE 82 (245)
T ss_dssp TCCEEEECSCTTTHHHHHHHHHH---T---TCEEEECCCCCCHH
T ss_pred CCcEEEEccChHHHHHHHHHHHH---c---CCCEEEcCCCCCHH
Confidence 68999988888777776655443 2 45566667787654
No 296
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=96.03 E-value=0.016 Score=58.47 Aligned_cols=34 Identities=18% Similarity=0.323 Sum_probs=26.7
Q ss_pred CceEEEEC-ccHHHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 012547 43 PLRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (461)
Q Consensus 43 ~mkI~IIG-aGamG~alA~~La~~~G~~~~~~~V~l~~r~ 81 (461)
++||+|+| .|.+|..+...|.++ . ..+|..+.++
T Consensus 8 ~~kV~IiGAtG~iG~~llr~L~~~-p----~~ev~~i~~s 42 (354)
T 1ys4_A 8 KIKVGVLGATGSVGQRFVQLLADH-P----MFELTALAAS 42 (354)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTC-S----SEEEEEEEEC
T ss_pred cceEEEECcCCHHHHHHHHHHhcC-C----CCEEEEEEcc
Confidence 37999999 799999999999865 3 2677766543
No 297
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=95.99 E-value=0.0085 Score=62.49 Aligned_cols=39 Identities=21% Similarity=0.259 Sum_probs=34.0
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (461)
+++|.|+|+|.+|.+++..|++. | ++|.+++|+.++++.
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~-G-----~~V~v~~R~~~~a~~ 41 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDS-G-----IKVTVACRTLESAKK 41 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTT-T-----CEEEEEESSHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-c-----CEEEEEECCHHHHHH
Confidence 36899999999999999999988 7 889999999865543
No 298
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=95.97 E-value=0.033 Score=55.23 Aligned_cols=39 Identities=13% Similarity=0.110 Sum_probs=28.5
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCee-EEEEecCchh
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGRS 84 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~-V~l~~r~~~~ 84 (461)
+++||+|||+|.+|..++..+.++.. ..+ |.++++++++
T Consensus 3 ~~irVaIIG~G~iG~~~~~~l~~~~~----~~elvav~d~~~~~ 42 (312)
T 1nvm_B 3 QKLKVAIIGSGNIGTDLMIKVLRNAK----YLEMGAMVGIDAAS 42 (312)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHCS----SEEEEEEECSCTTC
T ss_pred CCCEEEEEcCcHHHHHHHHHHHhhCc----CeEEEEEEeCChhh
Confidence 35799999999999999999976311 133 4467777654
No 299
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=95.97 E-value=0.018 Score=58.49 Aligned_cols=49 Identities=14% Similarity=0.178 Sum_probs=39.4
Q ss_pred HHHhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012547 32 LRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (461)
Q Consensus 32 ~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (461)
++..+|..+-.-++|+|+|+|+||..+|..|.+. | .+|.+++++.+.++
T Consensus 162 ~~~~~G~~~L~GktV~V~G~G~VG~~~A~~L~~~-G-----akVvv~D~~~~~l~ 210 (364)
T 1leh_A 162 AKEAFGSDSLEGLAVSVQGLGNVAKALCKKLNTE-G-----AKLVVTDVNKAAVS 210 (364)
T ss_dssp HHHHHSSCCCTTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHH
T ss_pred HHhhccccCCCcCEEEEECchHHHHHHHHHHHHC-C-----CEEEEEcCCHHHHH
Confidence 3455664344557999999999999999999998 8 89999999876544
No 300
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=95.88 E-value=0.0064 Score=62.51 Aligned_cols=39 Identities=18% Similarity=0.378 Sum_probs=33.7
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (461)
..+|+|+|+|.+|...+..+... | .+|++++++.+..+.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~-G-----a~V~v~D~~~~~~~~ 210 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSL-G-----AIVRAFDTRPEVKEQ 210 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCGGGHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-C-----CEEEEEcCCHHHHHH
Confidence 47999999999999999998877 8 789999999876543
No 301
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=95.81 E-value=0.019 Score=53.62 Aligned_cols=39 Identities=15% Similarity=0.227 Sum_probs=33.0
Q ss_pred CceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012547 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (461)
Q Consensus 43 ~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (461)
+|+|.|.|+ |.+|.+++..|++. | .++|++++|+++.++
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~-G----~~~V~~~~R~~~~~~ 62 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADK-Q----TIKQTLFARQPAKIH 62 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTC-T----TEEEEEEESSGGGSC
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhC-C----CceEEEEEcChhhhc
Confidence 478999994 99999999999988 6 279999999986543
No 302
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=95.80 E-value=0.019 Score=57.37 Aligned_cols=23 Identities=26% Similarity=0.348 Sum_probs=20.7
Q ss_pred CceEEEECccHHHHHHHHHHHHh
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDS 65 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~ 65 (461)
|+||+|||+|.+|+.++..+.++
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~ 24 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRK 24 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT
T ss_pred cEEEEEEeccHHHHHHHHHHHhh
Confidence 58999999999999999998764
No 303
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=95.77 E-value=0.0078 Score=59.94 Aligned_cols=35 Identities=23% Similarity=0.456 Sum_probs=32.1
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
.|||+|||+|..|.++|..|++. | ++|+++.++++
T Consensus 1 sm~V~IVGaGpaGl~~A~~L~~~-G-----~~v~v~Er~~~ 35 (412)
T 4hb9_A 1 SMHVGIIGAGIGGTCLAHGLRKH-G-----IKVTIYERNSA 35 (412)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSCS
T ss_pred CCEEEEECcCHHHHHHHHHHHhC-C-----CCEEEEecCCC
Confidence 38999999999999999999999 8 99999998654
No 304
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.76 E-value=0.04 Score=54.79 Aligned_cols=65 Identities=17% Similarity=0.230 Sum_probs=44.5
Q ss_pred cCcccccccchhHHhhHHHHHhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecC---chhhh
Q 012547 14 SNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRP---GRSVD 86 (461)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~-~V~l~~r~---~~~~~ 86 (461)
.+|-++-.|-.-.-=+.-|+.. + .+....++.|+|+|.+|.+++..|++. | . +|++++|+ .++++
T Consensus 121 ~~g~l~G~NTD~~Gf~~~L~~~-~-~~l~gk~~lVlGAGGaaraia~~L~~~-G-----~~~v~v~nRt~~~~~~a~ 189 (312)
T 3t4e_A 121 DDGYLRGYNTDGTGHIRAIKES-G-FDMRGKTMVLLGAGGAATAIGAQAAIE-G-----IKEIKLFNRKDDFFEKAV 189 (312)
T ss_dssp ETTEEEEECHHHHHHHHHHHHT-T-CCCTTCEEEEECCSHHHHHHHHHHHHT-T-----CSEEEEEECSSTHHHHHH
T ss_pred cCCEEEEeCCcHHHHHHHHHhc-C-CCcCCCEEEEECcCHHHHHHHHHHHHc-C-----CCEEEEEECCCchHHHHH
Confidence 3565555554443333444432 2 223446899999999999999999998 8 5 89999999 54444
No 305
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=95.75 E-value=0.033 Score=55.87 Aligned_cols=30 Identities=20% Similarity=0.256 Sum_probs=23.3
Q ss_pred cCHHHHhcCCCEEEEcCCchhHHHHHHHHH
Q 012547 152 TNLQEAVWDADIVINGLPSTETKEVFEEIS 181 (461)
Q Consensus 152 ~dl~~av~~aDiIIiaVps~~~~~vl~~i~ 181 (461)
.+.++.+.++|+||.|+|.....+......
T Consensus 70 ~~~~~~~~~vDvV~~atp~~~~~~~a~~~l 99 (337)
T 1cf2_P 70 GTVDDMLDEADIVIDCTPEGIGAKNLKMYK 99 (337)
T ss_dssp EEHHHHHHTCSEEEECCSTTHHHHHHHHHH
T ss_pred CCHHHHhcCCCEEEECCCchhhHHHHHHHH
Confidence 456666678999999999988777666543
No 306
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=95.74 E-value=0.062 Score=51.45 Aligned_cols=34 Identities=15% Similarity=0.223 Sum_probs=30.5
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
.+|.|||+|.+|+.++..|+.. |. .+++++|++.
T Consensus 29 ~~VlvvG~GglG~~va~~La~~-Gv----g~i~lvD~d~ 62 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGA-GV----GTLVLADDDD 62 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-TC----SEEEEECCCB
T ss_pred CcEEEEccCHHHHHHHHHHHHc-CC----CeEEEEeCCC
Confidence 6899999999999999999999 82 5899998875
No 307
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=95.73 E-value=0.028 Score=51.56 Aligned_cols=37 Identities=24% Similarity=0.264 Sum_probs=33.4
Q ss_pred CceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhh
Q 012547 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (461)
Q Consensus 43 ~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (461)
+|||.|.|+ |.+|.+++..|.+. | ++|++.+|+++..
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~~~ 41 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNR-G-----FEVTAVVRHPEKI 41 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTT-T-----CEEEEECSCGGGC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHC-C-----CEEEEEEcCcccc
Confidence 589999995 99999999999999 8 9999999997654
No 308
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=95.71 E-value=0.032 Score=56.13 Aligned_cols=35 Identities=20% Similarity=0.226 Sum_probs=31.3
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
..||.|||+|..|+.+|..|+.. |. .+++++|++.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~a-GV----g~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAW-GV----RKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TC----CEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHc-CC----CEEEEecCCE
Confidence 47899999999999999999999 83 6899999875
No 309
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=95.67 E-value=0.042 Score=55.19 Aligned_cols=34 Identities=15% Similarity=0.209 Sum_probs=25.9
Q ss_pred eEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHH
Q 012547 148 LKVVTNLQEAVWDADIVINGLPSTETKEVFEEIS 181 (461)
Q Consensus 148 i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~ 181 (461)
+..+.+.++...++|+||.|+|.....+..+...
T Consensus 65 v~v~~~~e~l~~~vDvV~~aTp~~~s~~~a~~~~ 98 (340)
T 1b7g_O 65 IPVAGTVEDLIKTSDIVVDTTPNGVGAQYKPIYL 98 (340)
T ss_dssp CCCCCCHHHHHHHCSEEEECCSTTHHHHHHHHHH
T ss_pred cccccCHhHhhcCCCEEEECCCCchhHHHHHHHH
Confidence 4455677776678999999999998877765543
No 310
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.61 E-value=0.06 Score=56.20 Aligned_cols=54 Identities=17% Similarity=0.294 Sum_probs=46.4
Q ss_pred HhhHHHHHhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012547 27 ERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (461)
Q Consensus 27 ~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (461)
+.++++...+|..+....+|.|+|+|.+|..+|..|.+. ++|.+..+++++++.
T Consensus 219 ~~i~~~~~~~g~~~~~~~~v~I~GgG~ig~~lA~~L~~~-------~~v~iIE~d~~r~~~ 272 (461)
T 4g65_A 219 NHIRSVMSELQRLEKPYRRIMIVGGGNIGASLAKRLEQT-------YSVKLIERNLQRAEK 272 (461)
T ss_dssp TTHHHHHHHTTGGGSCCCEEEEECCSHHHHHHHHHHTTT-------SEEEEEESCHHHHHH
T ss_pred chHHHHHHhhccccccccEEEEEcchHHHHHHHHHhhhc-------CceEEEecCHHHHHH
Confidence 456778888888887788999999999999999998644 899999999987765
No 311
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=95.54 E-value=0.026 Score=52.43 Aligned_cols=38 Identities=21% Similarity=0.206 Sum_probs=34.2
Q ss_pred CceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012547 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (461)
Q Consensus 43 ~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (461)
.|+|.|.|+ |.+|.+++..|++. | ++|++.+|+++..+
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~-G-----~~V~~~~R~~~~~~ 59 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNK-G-----HEPVAMVRNEEQGP 59 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESSGGGHH
T ss_pred CCeEEEECCCChHHHHHHHHHHhC-C-----CeEEEEECChHHHH
Confidence 379999998 99999999999999 8 99999999987554
No 312
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=95.52 E-value=0.013 Score=58.17 Aligned_cols=37 Identities=14% Similarity=-0.031 Sum_probs=32.3
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (461)
.++|.|+|+|.+|..++..|.+. | + |.+++++++.++
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~-g-----~-v~vid~~~~~~~ 151 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGS-E-----V-FVLAEDENVRKK 151 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGS-C-----E-EEEESCGGGHHH
T ss_pred cCCEEEECCcHHHHHHHHHHHhC-C-----c-EEEEeCChhhhh
Confidence 46899999999999999999888 7 8 999999987654
No 313
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.52 E-value=0.011 Score=53.03 Aligned_cols=32 Identities=19% Similarity=0.333 Sum_probs=30.0
Q ss_pred eEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 45 RIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 45 kI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
.|+|||||.-|.+.|..|++. | ++|+++++.+
T Consensus 4 dV~IIGaGpaGL~aA~~La~~-G-----~~V~v~Ek~~ 35 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAA-G-----HQVHLFDKSR 35 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHC-C-----CCEEEEECCC
Confidence 599999999999999999999 8 9999999865
No 314
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=95.47 E-value=0.016 Score=58.55 Aligned_cols=40 Identities=20% Similarity=0.303 Sum_probs=34.9
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (461)
...+|.|+|+|.+|.+.+..+... | .+|++++|++++++.
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~-G-----a~V~v~dr~~~r~~~ 205 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGL-G-----AQVQIFDINVERLSY 205 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-C-----CEEEEEeCCHHHHHH
Confidence 347999999999999999999888 8 799999999876654
No 315
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=95.46 E-value=0.029 Score=55.52 Aligned_cols=40 Identities=23% Similarity=0.417 Sum_probs=31.3
Q ss_pred CCceEEEECc-cHHHHHHHHHHHHhcCCCC--CCeeEEEEecCc
Q 012547 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLR--DKVLIRIWRRPG 82 (461)
Q Consensus 42 ~~mkI~IIGa-GamG~alA~~La~~~G~~~--~~~~V~l~~r~~ 82 (461)
++|||+|+|+ |.+|+.++..|... |++. ..++|.++++.+
T Consensus 3 ~~mkVlVtGaaGfIG~~l~~~L~~~-g~~~~~~~~ev~l~D~~~ 45 (327)
T 1y7t_A 3 APVRVAVTGAAGQIGYSLLFRIAAG-EMLGKDQPVILQLLEIPQ 45 (327)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTT-TTTCTTCCEEEEEECCGG
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhC-CCCCCCCCCEEEEEeCCC
Confidence 4589999997 99999999999987 7320 013899999864
No 316
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=95.43 E-value=0.017 Score=58.78 Aligned_cols=39 Identities=18% Similarity=0.228 Sum_probs=33.6
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (461)
...+|+|+|+|.+|.+.+..+... | .+|+++++++++.+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~-G-----a~V~~~d~~~~~~~ 209 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRL-G-----AVVMATDVRAATKE 209 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCSTTHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHH
Confidence 457999999999999999988877 8 78999999986554
No 317
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=95.42 E-value=0.11 Score=51.21 Aligned_cols=64 Identities=28% Similarity=0.357 Sum_probs=32.3
Q ss_pred ccCcccccccchhHHhhHHHHHhhcC----CCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 13 SSNGLIHHTNGSLEERLDELRRLMGK----AEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
||.---||..|---.|.--||. +|. ..-+..||.|||+|..|+.++..|+.. |. .+++++|.+.
T Consensus 3 ~~~~~~~~~~~~~y~r~i~L~~-~G~~~~q~kL~~~~VlVvGaGGlGs~va~~La~a-GV----G~i~lvD~D~ 70 (292)
T 3h8v_A 3 SSHHHHHHSSGLVPRGSMALKR-MGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRC-GI----GKLLLFDYDK 70 (292)
T ss_dssp ------------------------------CGGGGCEEEEECCSHHHHHHHHHHHHH-TC----SEEEEECCCB
T ss_pred cccccccccCCCCchHhhcccc-cChHHHHHHHhCCeEEEECcCHHHHHHHHHHHHc-CC----CEEEEECCCc
Confidence 3444456777766677666665 333 222347999999999999999999999 82 5899998875
No 318
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=95.38 E-value=0.036 Score=59.72 Aligned_cols=35 Identities=20% Similarity=0.226 Sum_probs=30.8
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
..||.|||+|..|+.+|..|+.. |. .+++++|.+.
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~a-GV----G~ItLvD~D~ 361 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAW-GV----RKITFVDNGT 361 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TC----CEEEEECCSB
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CC----CEEEEECCCc
Confidence 47999999999999999999999 82 5899998763
No 319
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=95.36 E-value=0.089 Score=52.88 Aligned_cols=52 Identities=19% Similarity=0.201 Sum_probs=40.6
Q ss_pred HHhhHHHHHhhcCCCC---CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 26 EERLDELRRLMGKAEG---DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 26 ~~~~~~~~~~~~~~~~---~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
++|.|.-.+++|...- ...+|+|||+|..|+.+|..|+.. |. ..++++|.+.
T Consensus 16 ~~rY~Rq~~l~G~~~q~~L~~~~VlivG~GGlG~~ia~~La~~-Gv----g~itlvD~d~ 70 (346)
T 1y8q_A 16 AAQYDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILA-GV----KGLTMLDHEQ 70 (346)
T ss_dssp HHHHHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHH-TC----SEEEEECCCB
T ss_pred HHHHHHHHHhhCHHHHHHHhCCeEEEECCCHHHHHHHHHHHHc-CC----CEEEEEECCC
Confidence 4577777777764332 236899999999999999999999 82 5899998764
No 320
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=95.26 E-value=0.055 Score=54.37 Aligned_cols=34 Identities=15% Similarity=0.121 Sum_probs=26.5
Q ss_pred CceEEEEC-ccHHHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 012547 43 PLRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (461)
Q Consensus 43 ~mkI~IIG-aGamG~alA~~La~~~G~~~~~~~V~l~~r~ 81 (461)
+|||+|+| .|.+|..+...|.+. . ..++..+.++
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~-p----~~elv~v~s~ 38 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSH-P----YLEVKQVTSR 38 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTC-T----TEEEEEEBCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHcC-C----CcEEEEEECc
Confidence 47999999 599999999999866 3 2566665553
No 321
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=95.25 E-value=0.015 Score=55.62 Aligned_cols=36 Identities=22% Similarity=0.288 Sum_probs=32.8
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchh
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (461)
+|||.|.|+|.+|+.++..|.+. | ++|++++|+.+.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~-g-----~~V~~~~r~~~~ 38 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQ-G-----HEVTGLRRSAQP 38 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECTTSC
T ss_pred CCcEEEECCCHHHHHHHHHHHHC-C-----CEEEEEeCCccc
Confidence 47999999999999999999999 8 999999998753
No 322
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=95.11 E-value=0.0093 Score=59.84 Aligned_cols=59 Identities=20% Similarity=0.113 Sum_probs=41.0
Q ss_pred cccccchhHHhhHHHHHhhcCCCCCCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchh
Q 012547 18 IHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (461)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (461)
.+|++..-.-. +|+++...|.. .+|+|.|.|+ |.+|.+++..|.+. | ++|++.+|+...
T Consensus 6 ~~~~~~~~~~~-~~~~~~~~~~~-~~~~vlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~~ 65 (379)
T 2c5a_A 6 TNGTDYGAYTY-KELEREQYWPS-ENLKISITGAGGFIASHIARRLKHE-G-----HYVIASDWKKNE 65 (379)
T ss_dssp ---------CC-TTCCCCCSCTT-SCCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESSCCS
T ss_pred cCCcchhhhhH-HHHhccccccc-cCCeEEEECCccHHHHHHHHHHHHC-C-----CeEEEEECCCcc
Confidence 44454443333 66777666655 5689999998 99999999999998 8 999999998653
No 323
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=95.07 E-value=0.075 Score=51.63 Aligned_cols=67 Identities=18% Similarity=0.170 Sum_probs=48.6
Q ss_pred cCcccccccchhHHhhHHHHHhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012547 14 SNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (461)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (461)
.+|-++-.|-.-.-=+.-|++.- .+....++.|+|+|..+.+++..|++. | ..+|++++|+.++++.
T Consensus 98 ~dG~l~G~NTD~~Gf~~~L~~~g--~~~~~~~~lilGaGGaarai~~aL~~~-g----~~~i~i~nRt~~ra~~ 164 (269)
T 3tum_A 98 RDGRLLGDNVDGAGFLGAAHKHG--FEPAGKRALVIGCGGVGSAIAYALAEA-G----IASITLCDPSTARMGA 164 (269)
T ss_dssp TTSCEEEECCHHHHHHHHHHHTT--CCCTTCEEEEECCSHHHHHHHHHHHHT-T----CSEEEEECSCHHHHHH
T ss_pred CCCEEEEEEcChHHHHHHHHHhC--CCcccCeEEEEecHHHHHHHHHHHHHh-C----CCeEEEeCCCHHHHHH
Confidence 46766655655444445555532 233446899999999999999999988 7 2589999999887664
No 324
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=94.91 E-value=0.03 Score=53.31 Aligned_cols=38 Identities=18% Similarity=0.161 Sum_probs=34.3
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (461)
+|||.|.|+|.+|+.++..|.+. | ++|++.+|+++..+
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~-g-----~~V~~~~r~~~~~~ 42 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQ-G-----WRIIGTSRNPDQME 42 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGG-T-----CEEEEEESCGGGHH
T ss_pred cCcEEEECCcHHHHHHHHHHHHC-C-----CEEEEEEcChhhhh
Confidence 58999999999999999999999 8 99999999986544
No 325
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=94.90 E-value=0.027 Score=56.18 Aligned_cols=38 Identities=11% Similarity=0.074 Sum_probs=32.2
Q ss_pred CCCceEEEECccHH-HHHHHHHHHHhcCCCCCCeeEEEEecCchh
Q 012547 41 GDPLRIVGVGAGAW-GSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (461)
Q Consensus 41 ~~~mkI~IIGaGam-G~alA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (461)
....+++|||+|.+ |..+|..|... | .+|++++|+..+
T Consensus 175 l~gk~vvVIG~G~iVG~~~A~~L~~~-g-----AtVtv~nR~~~~ 213 (320)
T 1edz_A 175 LYGKKCIVINRSEIVGRPLAALLAND-G-----ATVYSVDVNNIQ 213 (320)
T ss_dssp TTTCEEEEECCCTTTHHHHHHHHHTT-S-----CEEEEECSSEEE
T ss_pred CCCCEEEEECCCcchHHHHHHHHHHC-C-----CEEEEEeCchHH
Confidence 34579999999976 99999999988 7 789999998543
No 326
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=94.75 E-value=0.1 Score=54.84 Aligned_cols=56 Identities=20% Similarity=0.092 Sum_probs=43.3
Q ss_pred chhHHhhHHHHHhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhh
Q 012547 23 GSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (461)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (461)
|.-+.-+|-+++..++. -.-++++|+|+|.+|.++|..|+.. | .+|.++++++..+
T Consensus 246 Gt~~sl~dgi~r~tg~~-L~GKtVvVtGaGgIG~aiA~~Laa~-G-----A~Viv~D~~~~~a 301 (488)
T 3ond_A 246 GCRHSLPDGLMRATDVM-IAGKVAVVAGYGDVGKGCAAALKQA-G-----ARVIVTEIDPICA 301 (488)
T ss_dssp HHHHHHHHHHHHHHCCC-CTTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSCHHHH
T ss_pred cccHHHHHHHHHHcCCc-ccCCEEEEECCCHHHHHHHHHHHHC-C-----CEEEEEcCCHHHH
Confidence 33344567777777652 2336899999999999999999998 8 8999999987543
No 327
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=94.65 E-value=0.051 Score=54.98 Aligned_cols=33 Identities=18% Similarity=0.302 Sum_probs=26.1
Q ss_pred ceEEEEC-ccHHHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 012547 44 LRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (461)
Q Consensus 44 mkI~IIG-aGamG~alA~~La~~~G~~~~~~~V~l~~r~ 81 (461)
+||+|+| .|.+|..+...|.+. . ..++..+...
T Consensus 17 ~kV~IiGAtG~iG~~llr~L~~~-p----~~elvai~~~ 50 (359)
T 1xyg_A 17 IRIGLLGASGYTGAEIVRLLANH-P----HFQVTLMTAD 50 (359)
T ss_dssp EEEEEECCSSHHHHHHHHHHHTC-S----SEEEEEEBCS
T ss_pred cEEEEECcCCHHHHHHHHHHHcC-C----CcEEEEEeCc
Confidence 7999999 799999999999876 3 2466666544
No 328
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=94.64 E-value=0.096 Score=52.27 Aligned_cols=23 Identities=13% Similarity=0.242 Sum_probs=20.7
Q ss_pred CceEEEECccHHHHHHHHHHHHh
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDS 65 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~ 65 (461)
++||+|||+|.||..++..+.+.
T Consensus 6 ~irvgIiG~G~VG~~~~~~l~~~ 28 (331)
T 3c8m_A 6 TINLSIFGLGNVGLNLLRIIRSF 28 (331)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH
T ss_pred EEeEEEEecCHHHHHHHHHHHhC
Confidence 47999999999999999998765
No 329
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=94.60 E-value=0.14 Score=55.20 Aligned_cols=35 Identities=20% Similarity=0.226 Sum_probs=31.4
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
..||.|||+|..|+.+|..|+.. |. .+++++|.+.
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~a-GV----G~ItLvD~D~ 360 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAW-GV----RKITFVDNGT 360 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TC----CEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CC----CEEEEEcCCC
Confidence 37899999999999999999999 83 6899999875
No 330
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=94.58 E-value=0.037 Score=55.47 Aligned_cols=23 Identities=30% Similarity=0.572 Sum_probs=20.9
Q ss_pred CceEEEECccHHHHHHHHHHHHh
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDS 65 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~ 65 (461)
++||+|||+|.+|..++..+.++
T Consensus 3 ~irvgIiG~G~VG~~~~~~l~~~ 25 (332)
T 2ejw_A 3 ALKIALLGGGTVGSAFYNLVLER 25 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT
T ss_pred eeEEEEEcCCHHHHHHHHHHHhC
Confidence 47999999999999999998875
No 331
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=94.58 E-value=0.11 Score=54.21 Aligned_cols=46 Identities=17% Similarity=0.198 Sum_probs=29.8
Q ss_pred EEecCHHHHhc--CCCEEEEcCCc-hhHHHHHHHHHHHhhccCCCCEEEEEeecC
Q 012547 149 KVVTNLQEAVW--DADIVINGLPS-TETKEVFEEISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 149 ~~t~dl~~av~--~aDiIIiaVps-~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi 200 (461)
..++|+++.+. +.|+|++++|+ ....+.+.+ .+.. +..|++.-|++
T Consensus 65 ~~~~d~~ell~d~diDvVve~tp~~~~h~~~~~~---AL~a---GKhVvtenkal 113 (444)
T 3mtj_A 65 PLTTNPFDVVDDPEIDIVVELIGGLEPARELVMQ---AIAN---GKHVVTANKHL 113 (444)
T ss_dssp CEESCTHHHHTCTTCCEEEECCCSSTTHHHHHHH---HHHT---TCEEEECCHHH
T ss_pred cccCCHHHHhcCCCCCEEEEcCCCchHHHHHHHH---HHHc---CCEEEECCccc
Confidence 34677887775 47999999996 555555433 2344 56777666643
No 332
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=94.58 E-value=0.058 Score=51.44 Aligned_cols=38 Identities=24% Similarity=0.142 Sum_probs=32.1
Q ss_pred ceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012547 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (461)
Q Consensus 44 mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (461)
|||.|.|+ |.+|.+++..|.+..| ++|++.+|+++..+
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g-----~~V~~~~R~~~~~~ 39 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHI-----DHFHIGVRNVEKVP 39 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTC-----TTEEEEESSGGGSC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCC-----CcEEEEECCHHHHH
Confidence 78999996 9999999999987514 89999999986543
No 333
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=94.58 E-value=0.044 Score=53.35 Aligned_cols=37 Identities=19% Similarity=0.364 Sum_probs=33.0
Q ss_pred CceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhh
Q 012547 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (461)
Q Consensus 43 ~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (461)
+|+|.|.|+ |.+|++++..|.+. | ++|++.+|+.+..
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~~~ 50 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAA-G-----HDLVLIHRPSSQI 50 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT-T-----CEEEEEECTTSCG
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-C-----CEEEEEecChHhh
Confidence 479999996 99999999999998 8 9999999987644
No 334
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=94.57 E-value=0.067 Score=54.02 Aligned_cols=37 Identities=16% Similarity=0.231 Sum_probs=26.9
Q ss_pred HhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecC
Q 012547 157 AVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 157 av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi 200 (461)
.+.++|+||+|+|.....++++.+ .. +..+|.++.-+
T Consensus 77 ~~~~~DvVf~alg~~~s~~~~~~~----~~---G~~vIDlSa~~ 113 (352)
T 2nqt_A 77 VLGGHDAVFLALPHGHSAVLAQQL----SP---ETLIIDCGADF 113 (352)
T ss_dssp HHTTCSEEEECCTTSCCHHHHHHS----CT---TSEEEECSSTT
T ss_pred HhcCCCEEEECCCCcchHHHHHHH----hC---CCEEEEECCCc
Confidence 466899999999998777666555 22 56788777544
No 335
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=94.50 E-value=0.042 Score=49.86 Aligned_cols=37 Identities=22% Similarity=0.268 Sum_probs=33.3
Q ss_pred ceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012547 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (461)
Q Consensus 44 mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (461)
|||.|.|+ |.+|.+++..|++. | ++|++++|+++..+
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~R~~~~~~ 38 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNR-G-----HEVTAIVRNAGKIT 38 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESCSHHHH
T ss_pred CeEEEEcCCchhHHHHHHHHHhC-C-----CEEEEEEcCchhhh
Confidence 79999996 99999999999999 8 99999999986543
No 336
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=94.39 E-value=0.041 Score=56.39 Aligned_cols=111 Identities=25% Similarity=0.283 Sum_probs=67.4
Q ss_pred hhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhccccc
Q 012547 35 LMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYL 114 (461)
Q Consensus 35 ~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l 114 (461)
+.|+ .....||.|+|+|+.|.++|..+... |. .+|+++|++.-..+. ..++| +.. ...+
T Consensus 181 l~g~-~l~d~kVVi~GAGaAG~~iA~ll~~~-Ga----~~I~v~D~~Gli~~~-R~~~L----~~~----------k~~f 239 (398)
T 2a9f_A 181 LLKK-SLDEVSIVVNGGGSAGLSITRKLLAA-GA----TKVTVVDKFGIINEQ-EAAQL----APH----------HLDI 239 (398)
T ss_dssp TTTC-CTTSCEEEEECCSHHHHHHHHHHHHH-TC----CEEEEEETTEECCTT-CCCSC----CC-------------CH
T ss_pred HhCC-CCCccEEEEECCCHHHHHHHHHHHHc-CC----CeEEEEECCCcccCC-ccccc----hHH----------HHHH
Confidence 3444 45568999999999999999999988 81 399999998411000 00000 000 0000
Q ss_pred chhhhhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcC-CchhHHHHHHHHHHHhhccCCCCEE
Q 012547 115 KYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGL-PSTETKEVFEEISRYWKERITVPVI 193 (461)
Q Consensus 115 ~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaV-ps~~~~~vl~~i~~~l~~~~~~~iI 193 (461)
.... + ......+++++++++|++|=+. |--..++++++++ + +.+|
T Consensus 240 a~~~--------------------~-------~~~~~~~L~eav~~ADV~IG~Sapgl~T~EmVk~Ma----~---~pII 285 (398)
T 2a9f_A 240 AKVT--------------------N-------REFKSGTLEDALEGADIFIGVSAPGVLKAEWISKMA----A---RPVI 285 (398)
T ss_dssp HHHH--------------------S-------CTTCCCSCSHHHHTTCSEEECCSTTCCCHHHHHTSC----S---SCEE
T ss_pred hhcc--------------------C-------cccchhhHHHHhccCCEEEecCCCCCCCHHHHHhhC----C---CCEE
Confidence 0000 0 0111356788999999876654 3346777777765 3 5789
Q ss_pred EEEeecC
Q 012547 194 ISLAKGV 200 (461)
Q Consensus 194 Is~tkGi 200 (461)
+.++|-.
T Consensus 286 falsNPt 292 (398)
T 2a9f_A 286 FAMANPI 292 (398)
T ss_dssp EECCSSS
T ss_pred EECCCCC
Confidence 9899875
No 337
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=94.38 E-value=0.18 Score=50.70 Aligned_cols=35 Identities=23% Similarity=0.318 Sum_probs=31.4
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
..+|.|||+|..|+.+|..|+.. |. .+++++|++.
T Consensus 118 ~~~VlvvG~GglGs~va~~La~a-Gv----g~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATS-GI----GEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-TC----SEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhC-CC----CeEEEECCCc
Confidence 46899999999999999999999 82 5899999875
No 338
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=94.34 E-value=0.16 Score=51.00 Aligned_cols=33 Identities=18% Similarity=0.259 Sum_probs=25.5
Q ss_pred CCceEEEEC-ccHHHHHHHHHHHHhcCCCCCCeeEEEEe
Q 012547 42 DPLRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWR 79 (461)
Q Consensus 42 ~~mkI~IIG-aGamG~alA~~La~~~G~~~~~~~V~l~~ 79 (461)
+++||+|+| .|.+|..+...|... . ..++..+.
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~-p----~~elvai~ 36 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAKH-P----YLELVKVS 36 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTTC-S----SEEEEEEE
T ss_pred CCcEEEEECcCCHHHHHHHHHHHhC-C----CcEEEEEe
Confidence 358999999 699999999998865 2 25666554
No 339
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=94.34 E-value=0.068 Score=51.59 Aligned_cols=45 Identities=18% Similarity=0.082 Sum_probs=32.1
Q ss_pred EEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeec
Q 012547 149 KVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKG 199 (461)
Q Consensus 149 ~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkG 199 (461)
.+++|+++.+.++|+|+.|.++..+++.+.++ |.. +.-+|+.+-|
T Consensus 49 ~a~~d~d~lla~pD~VVe~A~~~av~e~~~~i---L~a---G~dvv~~S~g 93 (253)
T 1j5p_A 49 VVRLDEFQVPSDVSTVVECASPEAVKEYSLQI---LKN---PVNYIIISTS 93 (253)
T ss_dssp SEECSSCCCCTTCCEEEECSCHHHHHHHHHHH---TTS---SSEEEECCGG
T ss_pred eeeCCHHHHhhCCCEEEECCCHHHHHHHHHHH---HHC---CCCEEEcChh
Confidence 45677777777899999999888777655444 454 5567766655
No 340
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=94.30 E-value=0.042 Score=55.27 Aligned_cols=36 Identities=19% Similarity=0.456 Sum_probs=32.5
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
..++|+|||+|..|.++|..|++. | .+|+++++++.
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~-G-----~~v~v~E~~~~ 60 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQN-G-----IDVSVYERDND 60 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT-T-----CEEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-C-----CCEEEEeCCCC
Confidence 457899999999999999999999 8 89999998754
No 341
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.29 E-value=0.1 Score=49.41 Aligned_cols=37 Identities=14% Similarity=0.103 Sum_probs=32.3
Q ss_pred CCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 40 ~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
+-..++|.|||+|.+|..-+..|.+. | .+|++++.+.
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~-G-----A~VtVvap~~ 64 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQE-G-----AAITVVAPTV 64 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGG-C-----CCEEEECSSC
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHC-C-----CEEEEECCCC
Confidence 33447999999999999999999999 8 8999998764
No 342
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=94.24 E-value=0.047 Score=54.11 Aligned_cols=57 Identities=14% Similarity=0.176 Sum_probs=33.1
Q ss_pred ccccchhHHhhHHHHHhhcCCCCCCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012547 19 HHTNGSLEERLDELRRLMGKAEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (461)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (461)
||.-|.+++--... ..-.+|||.|.|+ |.+|++++..|.+..| ++|++++|+.+..+
T Consensus 6 ~~~~~~~~~~~~~~------~~m~~~~vlVtGatG~iG~~l~~~L~~~~g-----~~V~~~~r~~~~~~ 63 (372)
T 3slg_A 6 HHHMGTLEAQTQGP------GSMKAKKVLILGVNGFIGHHLSKRILETTD-----WEVFGMDMQTDRLG 63 (372)
T ss_dssp -----------------------CCCEEEEESCSSHHHHHHHHHHHHHSS-----CEEEEEESCCTTTG
T ss_pred cccccchhhhhcCC------cccCCCEEEEECCCChHHHHHHHHHHhCCC-----CEEEEEeCChhhhh
Confidence 45566666543332 2223579999995 9999999999987624 89999999876543
No 343
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=94.21 E-value=0.051 Score=58.13 Aligned_cols=48 Identities=17% Similarity=0.298 Sum_probs=38.2
Q ss_pred hHHhhHHHHHhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 25 LEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
...|-+.+.+|.. ....|.|||+|..|.++|..|++. | .+|.++.+..
T Consensus 18 ~~~r~~~~~~m~~----~~~DVvVIGgGi~G~~~A~~La~r-G-----~~V~LlE~~~ 65 (571)
T 2rgh_A 18 NKTRQDSIQKMQQ----EELDLLIIGGGITGAGVAVQAAAS-G-----IKTGLIEMQD 65 (571)
T ss_dssp HHHHHHHHHHHHH----SCBSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred ccCHHHHHHhccc----CCCCEEEECcCHHHHHHHHHHHHC-C-----CcEEEEeCCC
Confidence 4556666666542 235799999999999999999999 8 8999998753
No 344
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=94.18 E-value=0.06 Score=51.65 Aligned_cols=35 Identities=26% Similarity=0.228 Sum_probs=31.7
Q ss_pred CceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 43 ~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
+|+|.|.|+ |.+|.+++..|.+. | ++|++.+|+..
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~-g-----~~V~~l~R~~~ 39 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDL-G-----HPTFLLVREST 39 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT-T-----CCEEEECCCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC-C-----CCEEEEECCcc
Confidence 578999997 99999999999998 8 89999999853
No 345
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=94.18 E-value=0.093 Score=53.55 Aligned_cols=37 Identities=19% Similarity=0.304 Sum_probs=28.7
Q ss_pred hcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecC
Q 012547 158 VWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 158 v~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi 200 (461)
+.++|+||+|+|...-+++..++. .. +..+|.++.-+
T Consensus 91 ~~~~Dvvf~alp~~~s~~~~~~~~---~~---G~~VIDlSa~f 127 (381)
T 3hsk_A 91 FLECDVVFSGLDADVAGDIEKSFV---EA---GLAVVSNAKNY 127 (381)
T ss_dssp GGGCSEEEECCCHHHHHHHHHHHH---HT---TCEEEECCSTT
T ss_pred cccCCEEEECCChhHHHHHHHHHH---hC---CCEEEEcCCcc
Confidence 578999999999998888877764 33 57788877544
No 346
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=94.12 E-value=0.051 Score=49.57 Aligned_cols=37 Identities=24% Similarity=0.278 Sum_probs=33.5
Q ss_pred ceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012547 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (461)
Q Consensus 44 mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (461)
|||.|.|+ |.+|.+++..|++. | ++|++++|+++..+
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~-g-----~~V~~~~R~~~~~~ 38 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRR-G-----HEVLAVVRDPQKAA 38 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHH
T ss_pred CEEEEEcCCCHHHHHHHHHHHHC-C-----CEEEEEEecccccc
Confidence 78999998 99999999999999 8 99999999976543
No 347
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=94.10 E-value=0.048 Score=54.91 Aligned_cols=36 Identities=19% Similarity=0.335 Sum_probs=32.4
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
..++|+|||+|..|.++|..|++. | ++|+++++...
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~-G-----~~V~v~E~~~~ 57 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQS-G-----IDCDVYEAVKE 57 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-C-----CCEEEEeCCCC
Confidence 347899999999999999999999 8 89999999764
No 348
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=94.05 E-value=0.24 Score=51.39 Aligned_cols=34 Identities=24% Similarity=0.358 Sum_probs=30.4
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
.||.|||+|..|+.++..|+.. |. .+++++|.+.
T Consensus 41 ~~VlvvG~GGlGs~va~~La~a-Gv----g~i~ivD~D~ 74 (434)
T 1tt5_B 41 CKVLVIGAGGLGCELLKNLALS-GF----RQIHVIDMDT 74 (434)
T ss_dssp CCEEEECSSTHHHHHHHHHHHT-TC----CCEEEEECCB
T ss_pred CEEEEECcCHHHHHHHHHHHHc-CC----CEEEEEcCCE
Confidence 5899999999999999999999 82 5899998764
No 349
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=94.04 E-value=0.042 Score=56.29 Aligned_cols=33 Identities=27% Similarity=0.324 Sum_probs=30.9
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
++|.|||+|..|.++|..|++. | ++|+++++..
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~-G-----~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQH-D-----VDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHT-T-----CEEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHC-C-----CeEEEEcCCC
Confidence 5899999999999999999999 8 9999999875
No 350
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=94.04 E-value=0.071 Score=51.09 Aligned_cols=34 Identities=21% Similarity=0.142 Sum_probs=31.4
Q ss_pred CceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 43 ~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
+|+|.|.|+ |.+|.+++..|.+. | ++|++.+|+.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~R~~ 36 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKA-G-----NPTYALVRKT 36 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHH-T-----CCEEEEECCS
T ss_pred CcEEEEECCCchHHHHHHHHHHhC-C-----CcEEEEECCC
Confidence 478999997 99999999999999 8 8999999986
No 351
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=94.01 E-value=0.07 Score=51.69 Aligned_cols=35 Identities=20% Similarity=0.172 Sum_probs=31.4
Q ss_pred CCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 42 ~~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
.+|+|.|.|+ |.+|.+++..|.+. | ++|++.+|+.
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~-g-----~~V~~~~R~~ 38 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSF-S-----HPTFIYARPL 38 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHT-T-----CCEEEEECCC
T ss_pred cccEEEEEcCCchhHHHHHHHHHhC-C-----CcEEEEECCc
Confidence 3578999996 99999999999998 8 8999999986
No 352
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=93.96 E-value=0.04 Score=56.63 Aligned_cols=35 Identities=20% Similarity=0.216 Sum_probs=31.5
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
..+|+|||+|..|.+.|..|++. | .+|+++++++.
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~-G-----~~V~llEk~~~ 61 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKR-G-----RRVLVIDHARA 61 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-C-----CcEEEEeCCCC
Confidence 46899999999999999999999 8 89999998864
No 353
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=93.95 E-value=0.24 Score=49.78 Aligned_cols=23 Identities=17% Similarity=0.309 Sum_probs=20.7
Q ss_pred CceEEEECccHHHHHHHHHHHHh
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDS 65 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~ 65 (461)
++||+|+|+|.+|..++..|..+
T Consensus 2 mikVgI~G~G~IGr~v~r~l~~~ 24 (343)
T 2yyy_A 2 PAKVLINGYGSIGKRVADAVSMQ 24 (343)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHS
T ss_pred ceEEEEECCCHHHHHHHHHHHhC
Confidence 36999999999999999998865
No 354
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=93.86 E-value=0.081 Score=50.87 Aligned_cols=34 Identities=24% Similarity=0.249 Sum_probs=31.3
Q ss_pred CceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 43 ~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
+|+|.|.|+ |.+|.+++..|.+. | ++|++.+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~-g-----~~V~~~~R~~ 38 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISL-G-----HPTYVLFRPE 38 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT-T-----CCEEEECCSC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC-C-----CcEEEEECCC
Confidence 578999996 99999999999998 8 8999999985
No 355
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=93.84 E-value=0.048 Score=54.00 Aligned_cols=35 Identities=17% Similarity=0.226 Sum_probs=31.5
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
...+|+|||+|..|.+.|..|++. | .+|+++++..
T Consensus 16 ~~~dvvIIGgG~~Gl~~A~~La~~-G-----~~V~llE~~~ 50 (382)
T 1ryi_A 16 RHYEAVVIGGGIIGSAIAYYLAKE-N-----KNTALFESGT 50 (382)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC-C-----CcEEEEeCCC
Confidence 346899999999999999999999 8 8999999864
No 356
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=93.78 E-value=0.092 Score=48.52 Aligned_cols=37 Identities=22% Similarity=0.348 Sum_probs=32.6
Q ss_pred ceEEEECc-cHHHHHHHHHHHHhcCCCCCCe--eEEEEecCchhhh
Q 012547 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPGRSVD 86 (461)
Q Consensus 44 mkI~IIGa-GamG~alA~~La~~~G~~~~~~--~V~l~~r~~~~~~ 86 (461)
|+|.|.|+ |.+|.+++..|++. | + +|.+++|+++..+
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~~~-G-----~~~~V~~~~r~~~~~~ 58 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEILEQ-G-----LFSKVTLIGRRKLTFD 58 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHH-T-----CCSEEEEEESSCCCCC
T ss_pred CeEEEECCCcHHHHHHHHHHHcC-C-----CCCEEEEEEcCCCCcc
Confidence 68999995 99999999999999 8 7 9999999876443
No 357
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=93.74 E-value=0.16 Score=51.63 Aligned_cols=38 Identities=16% Similarity=0.038 Sum_probs=28.5
Q ss_pred HhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecC
Q 012547 157 AVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 157 av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi 200 (461)
.+.++|+||+|+|...-++.+..+. .. +..+|.++.-+
T Consensus 61 ~~~~~Dvvf~a~~~~~s~~~a~~~~---~~---G~~vIDlSa~~ 98 (366)
T 3pwk_A 61 AFEGVDIALFSAGSSTSAKYAPYAV---KA---GVVVVDNTSYF 98 (366)
T ss_dssp TTTTCSEEEECSCHHHHHHHHHHHH---HT---TCEEEECSSTT
T ss_pred HhcCCCEEEECCChHhHHHHHHHHH---HC---CCEEEEcCCcc
Confidence 3578999999999888777776654 33 57788877544
No 358
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=93.64 E-value=0.36 Score=51.36 Aligned_cols=51 Identities=20% Similarity=0.167 Sum_probs=40.5
Q ss_pred HhhHHHHHhhcCCCCC---CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 27 ERLDELRRLMGKAEGD---PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 27 ~~~~~~~~~~~~~~~~---~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
+|.+.-.+++|...-. ..||.|||+|..|+.++..|+.. |. ..++++|.+.
T Consensus 13 ~rY~Rqi~l~G~~~q~~L~~~~VlvvG~GGlGseiak~La~a-GV----g~itlvD~D~ 66 (531)
T 1tt5_A 13 QKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLP-GI----GSFTIIDGNQ 66 (531)
T ss_dssp HHTHHHHHHHHHHHHHHHHHCEEEEECCSHHHHHHHHHHHTT-TC----SEEEEECCCB
T ss_pred HHhhHHHHhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHc-CC----CeEEEEeCCE
Confidence 4777766777644322 36899999999999999999999 83 5899999775
No 359
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=93.62 E-value=0.094 Score=50.57 Aligned_cols=34 Identities=24% Similarity=0.313 Sum_probs=31.1
Q ss_pred CceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 43 ~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
+|||.|.|+ |.+|+.++..|.+. | ++|++.+|++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~ 36 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKND-G-----NTPIILTRSI 36 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC-C-----CEEEEEeCCC
Confidence 479999995 99999999999999 8 8999999984
No 360
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=93.61 E-value=0.071 Score=47.17 Aligned_cols=33 Identities=18% Similarity=0.289 Sum_probs=30.7
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
++|+|||+|..|..+|..|++. | .+|+++++.+
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-g-----~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-G-----LKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHC-C-----CcEEEEeCCC
Confidence 5899999999999999999998 8 8999999876
No 361
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=93.46 E-value=0.14 Score=51.71 Aligned_cols=37 Identities=30% Similarity=0.296 Sum_probs=28.4
Q ss_pred hcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecC
Q 012547 158 VWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 158 v~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi 200 (461)
+.++|+||+|+|...-+++...+. .. +..+|.++.-+
T Consensus 77 ~~~vDvvf~a~p~~~s~~~a~~~~---~~---G~~vIDlSa~~ 113 (359)
T 4dpk_A 77 MDDVDIIFSPLPQGAAGPVEEQFA---KE---GFPVISNSPDH 113 (359)
T ss_dssp CTTCCEEEECCCTTTHHHHHHHHH---HT---TCEEEECSSTT
T ss_pred hcCCCEEEECCChHHHHHHHHHHH---HC---CCEEEEcCCCc
Confidence 578999999999998888777654 33 57788877543
No 362
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=93.46 E-value=0.14 Score=51.71 Aligned_cols=37 Identities=30% Similarity=0.296 Sum_probs=28.4
Q ss_pred hcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecC
Q 012547 158 VWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 158 v~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi 200 (461)
+.++|+||+|+|...-+++...+. .. +..+|.++.-+
T Consensus 77 ~~~vDvvf~a~p~~~s~~~a~~~~---~~---G~~vIDlSa~~ 113 (359)
T 4dpl_A 77 MDDVDIIFSPLPQGAAGPVEEQFA---KE---GFPVISNSPDH 113 (359)
T ss_dssp CTTCCEEEECCCTTTHHHHHHHHH---HT---TCEEEECSSTT
T ss_pred hcCCCEEEECCChHHHHHHHHHHH---HC---CCEEEEcCCCc
Confidence 578999999999998888777654 33 57788877543
No 363
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=93.46 E-value=0.17 Score=50.54 Aligned_cols=23 Identities=26% Similarity=0.447 Sum_probs=20.7
Q ss_pred CceEEEECccHHHHHHHHHHHHh
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDS 65 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~ 65 (461)
++||+|||+|.||+.++..|.++
T Consensus 4 ~irVgIiG~G~VG~~~~~~L~~~ 26 (325)
T 3ing_A 4 EIRIILMGTGNVGLNVLRIIDAS 26 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH
T ss_pred eEEEEEEcCcHHHHHHHHHHHhc
Confidence 47999999999999999999763
No 364
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=93.42 E-value=0.076 Score=50.98 Aligned_cols=34 Identities=24% Similarity=0.404 Sum_probs=31.8
Q ss_pred ceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 44 mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
|||.|.|+ |.+|+.++..|.+. | |+|+...|++.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~-G-----~~V~~l~R~~~ 35 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNAR-G-----HEVTLVSRKPG 35 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-C-----CEEEEEECCCC
Confidence 89999998 99999999999999 8 99999999864
No 365
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=93.39 E-value=0.19 Score=52.71 Aligned_cols=39 Identities=18% Similarity=0.258 Sum_probs=30.0
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
++||.|||+|.+|++++..++++ .-+.. .+|++.+.+..
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~-~dv~~-~~I~vaD~~~~ 51 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEK-FDIKP-SQVTIIAAEGT 51 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHH-BCCCG-GGEEEEESSCC
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-CCCce-eEEEEeccchh
Confidence 37999999999999999999998 31110 26888877654
No 366
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=93.37 E-value=0.092 Score=51.85 Aligned_cols=34 Identities=26% Similarity=0.350 Sum_probs=30.9
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
...|+|||+|.+|.+.|..|++. | .+|+++++..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~-G-----~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARK-G-----YSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-C-----CEEEEEeccC
Confidence 46899999999999999999999 8 8999999753
No 367
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=93.33 E-value=0.066 Score=51.85 Aligned_cols=33 Identities=18% Similarity=0.341 Sum_probs=30.6
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
++|+|||+|..|.++|..|++. | .+|.++.++.
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~-G-----~~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAA-G-----HQVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHC-C-----CcEEEEECCC
Confidence 5799999999999999999999 8 8999999875
No 368
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=93.29 E-value=0.17 Score=50.13 Aligned_cols=35 Identities=14% Similarity=0.039 Sum_probs=31.4
Q ss_pred CCceEEEECccHHHHH-HHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 42 DPLRIVGVGAGAWGSV-FTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 42 ~~mkI~IIGaGamG~a-lA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
.++||.|||.|..|.+ +|..|.+. | ++|+++|++.
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~-G-----~~V~~~D~~~ 38 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEA-G-----FEVSGCDAKM 38 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHT-T-----CEEEEEESSC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhC-C-----CEEEEEcCCC
Confidence 4689999999999995 89999998 8 9999999875
No 369
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=93.29 E-value=0.18 Score=48.76 Aligned_cols=34 Identities=21% Similarity=0.281 Sum_probs=31.1
Q ss_pred ceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 44 mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
++|.|.|+ |.+|.+++..|.+. | ++|++.+|+.+
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~-g-----~~V~~l~R~~~ 46 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKL-G-----HPTYVFTRPNS 46 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHT-T-----CCEEEEECTTC
T ss_pred CeEEEECCCchHHHHHHHHHHHC-C-----CcEEEEECCCC
Confidence 48999996 99999999999998 8 89999999874
No 370
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=93.24 E-value=0.071 Score=55.95 Aligned_cols=36 Identities=25% Similarity=0.351 Sum_probs=32.2
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
..++|.|||+|..|.++|..|++. | .+|.++++.+.
T Consensus 10 ~~~dVlIVGaGpaGl~~A~~La~~-G-----~~v~vlE~~~~ 45 (500)
T 2qa1_A 10 SDAAVIVVGAGPAGMMLAGELRLA-G-----VEVVVLERLVE 45 (500)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEeCCCC
Confidence 346799999999999999999999 8 89999998764
No 371
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=93.22 E-value=0.12 Score=50.47 Aligned_cols=33 Identities=12% Similarity=0.154 Sum_probs=28.0
Q ss_pred CceEEEECccH-HHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 012547 43 PLRIVGVGAGA-WGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (461)
Q Consensus 43 ~mkI~IIGaGa-mG~alA~~La~~~G~~~~~~~V~l~~r~ 81 (461)
-.++.|||.|. +|..+|..|... | .+|+++.++
T Consensus 150 Gk~vvVvG~s~iVG~plA~lL~~~-g-----AtVtv~~~~ 183 (276)
T 3ngx_A 150 ENTVTIVNRSPVVGRPLSMMLLNR-N-----YTVSVCHSK 183 (276)
T ss_dssp SCEEEEECCCTTTHHHHHHHHHHT-T-----CEEEEECTT
T ss_pred CCEEEEEcCChHHHHHHHHHHHHC-C-----CeEEEEeCC
Confidence 36899999985 899999999988 7 889988543
No 372
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=93.18 E-value=0.12 Score=52.10 Aligned_cols=24 Identities=29% Similarity=0.430 Sum_probs=21.7
Q ss_pred CCceEEEECccHHHHHHHHHHHHh
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDS 65 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~ 65 (461)
+++||+|||+|.||..++..+.+.
T Consensus 3 k~i~vgIiG~G~VG~~~~~~l~~~ 26 (358)
T 1ebf_A 3 KVVNVAVIGAGVVGSAFLDQLLAM 26 (358)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHC
T ss_pred ceEEEEEEecCHHHHHHHHHHHhc
Confidence 458999999999999999999875
No 373
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=93.11 E-value=0.89 Score=49.34 Aligned_cols=34 Identities=26% Similarity=0.312 Sum_probs=30.8
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
.||.|||+|..|+.++..|+.. |. ..++++|.+.
T Consensus 18 s~VlVVGaGGLGsevak~La~a-GV----G~ItlvD~D~ 51 (640)
T 1y8q_B 18 GRVLVVGAGGIGCELLKNLVLT-GF----SHIDLIDLDT 51 (640)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TC----CEEEEEECCB
T ss_pred CeEEEECcCHHHHHHHHHHHHc-CC----CeEEEecCCE
Confidence 5899999999999999999999 83 5899999875
No 374
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=93.10 E-value=0.069 Score=52.36 Aligned_cols=33 Identities=27% Similarity=0.599 Sum_probs=30.1
Q ss_pred ceEEEECccHHHHHHHHHHHH---hcCCCCCCeeEEEEecCc
Q 012547 44 LRIVGVGAGAWGSVFTAMLQD---SYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~---~~G~~~~~~~V~l~~r~~ 82 (461)
++|+|||+|..|.+.|..|++ . | ++|++++++.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~-G-----~~V~v~Ek~~ 37 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSG-P-----LYLAVWDKAD 37 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-C-C-----EEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccC-C-----ceEEEEECCC
Confidence 589999999999999999999 7 7 8999998763
No 375
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=93.09 E-value=0.082 Score=53.44 Aligned_cols=33 Identities=33% Similarity=0.422 Sum_probs=30.7
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
|+|+|||+|..|.+.|..|++. | .+|+++.++.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~-G-----~~V~vlE~~~ 33 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARN-G-----HEIIVLEKSA 33 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-T-----CEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHC-C-----CeEEEEeCCC
Confidence 6899999999999999999999 8 8999998864
No 376
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=93.01 E-value=0.13 Score=50.64 Aligned_cols=34 Identities=29% Similarity=0.343 Sum_probs=31.1
Q ss_pred CceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 43 ~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
+|+|.|.|+ |.+|.+++..|.+. | ++|++.+|+.
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~-g-----~~V~~l~R~~ 44 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDA-H-----RPTYILARPG 44 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHT-T-----CCEEEEECSS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHC-C-----CCEEEEECCC
Confidence 468999998 99999999999998 8 8999999987
No 377
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=92.99 E-value=0.097 Score=53.09 Aligned_cols=34 Identities=24% Similarity=0.395 Sum_probs=30.9
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPG 82 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~-~V~l~~r~~ 82 (461)
...|.|||+|..|.+.|..|++. | . +|++++++.
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~-G-----~~~V~vlE~~~ 40 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARR-G-----YTNVTVLDPYP 40 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHT-T-----CCCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHc-C-----CCcEEEEeCCC
Confidence 45799999999999999999999 8 8 899998875
No 378
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=92.96 E-value=0.076 Score=52.18 Aligned_cols=33 Identities=18% Similarity=0.238 Sum_probs=30.3
Q ss_pred eEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 45 RIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 45 kI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
-|+|||+|..|++.|..|++. | ++|+++.+.++
T Consensus 6 DViIVGaGpaGl~~A~~La~~-G-----~~V~v~Er~~~ 38 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKY-G-----LKTLMIEKRPE 38 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHC-C-----CcEEEEeCCCC
Confidence 399999999999999999999 8 99999998754
No 379
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=92.86 E-value=0.17 Score=49.15 Aligned_cols=65 Identities=18% Similarity=0.012 Sum_probs=46.2
Q ss_pred cCcccccccchhHHhhHHHHHhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012547 14 SNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (461)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (461)
.+|-++.+|-...--+.-|++. +. +-..+++.|+|+|.+|.++|..|++. + +|++++|+.++++.
T Consensus 101 ~~g~l~g~nTd~~G~~~~L~~~-~~-~l~~k~vlV~GaGgiG~aia~~L~~~------G-~V~v~~r~~~~~~~ 165 (287)
T 1nvt_A 101 EDGKAIGYNTDGIGARMALEEE-IG-RVKDKNIVIYGAGGAARAVAFELAKD------N-NIIIANRTVEKAEA 165 (287)
T ss_dssp ETTEEEEECCHHHHHHHHHHHH-HC-CCCSCEEEEECCSHHHHHHHHHHTSS------S-EEEEECSSHHHHHH
T ss_pred eCCEEEEecCCHHHHHHHHHHh-CC-CcCCCEEEEECchHHHHHHHHHHHHC------C-CEEEEECCHHHHHH
Confidence 3565566665555555555542 22 22346899999999999999999977 4 89999999876654
No 380
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=92.83 E-value=0.19 Score=49.31 Aligned_cols=33 Identities=21% Similarity=0.295 Sum_probs=27.9
Q ss_pred CceEEEECccH-HHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 012547 43 PLRIVGVGAGA-WGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (461)
Q Consensus 43 ~mkI~IIGaGa-mG~alA~~La~~~G~~~~~~~V~l~~r~ 81 (461)
-.++.|||.|. +|..+|..|... | ..|++..++
T Consensus 160 Gk~vvVvGrs~iVG~p~A~lL~~~-g-----AtVtv~h~~ 193 (285)
T 3p2o_A 160 GKDAVIIGASNIVGRPMATMLLNA-G-----ATVSVCHIK 193 (285)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHT-T-----CEEEEECTT
T ss_pred CCEEEEECCCchHHHHHHHHHHHC-C-----CeEEEEeCC
Confidence 37899999877 699999999988 7 789888543
No 381
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=92.82 E-value=0.27 Score=49.10 Aligned_cols=34 Identities=18% Similarity=0.262 Sum_probs=25.6
Q ss_pred CceEEEEC-ccHHHHHHHHHHHHhcCCCCCCeeEEEEe
Q 012547 43 PLRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWR 79 (461)
Q Consensus 43 ~mkI~IIG-aGamG~alA~~La~~~G~~~~~~~V~l~~ 79 (461)
+|||+|+| .|.+|..+...|.++ + + +..++..+.
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~-~-~-p~~elv~i~ 37 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQER-E-F-PVDELFLLA 37 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHT-T-C-CEEEEEEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHhcC-C-C-CCEEEEEEE
Confidence 58999999 899999999998876 3 1 114565554
No 382
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=92.81 E-value=0.088 Score=48.11 Aligned_cols=36 Identities=25% Similarity=0.265 Sum_probs=32.6
Q ss_pred ceEEEEC-ccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhh
Q 012547 44 LRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (461)
Q Consensus 44 mkI~IIG-aGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (461)
|||.|.| +|.+|.+++..|++. | ++|++.+|+.+..
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~-g-----~~V~~~~R~~~~~ 37 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTT-D-----YQIYAGARKVEQV 37 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTS-S-----CEEEEEESSGGGS
T ss_pred CeEEEECCCCHHHHHHHHHHHHC-C-----CEEEEEECCccch
Confidence 7999999 599999999999998 8 9999999998644
No 383
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=92.79 E-value=0.094 Score=52.72 Aligned_cols=33 Identities=27% Similarity=0.428 Sum_probs=30.8
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
|+|.|||+|..|.+.|..|+++ | ++|+++.++.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~-G-----~~V~vlE~~~ 33 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKA-G-----HEVEVFERLP 33 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHT-T-----CEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhC-C-----CceEEEeCCC
Confidence 6899999999999999999999 8 9999998865
No 384
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=92.72 E-value=0.19 Score=48.64 Aligned_cols=39 Identities=18% Similarity=0.186 Sum_probs=34.0
Q ss_pred CceEEEEC-ccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012547 43 PLRIVGVG-AGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (461)
Q Consensus 43 ~mkI~IIG-aGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (461)
.+++.|+| +|.+|.+++..|++. | .+|++++|+.+.+++
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~~~-G-----~~V~i~~R~~~~~~~ 158 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLAGE-G-----AEVVLCGRKLDKAQA 158 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHT-T-----CEEEEEESSHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-c-----CEEEEEECCHHHHHH
Confidence 36899999 899999999999999 8 789999999766553
No 385
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=92.68 E-value=0.11 Score=49.52 Aligned_cols=33 Identities=9% Similarity=-0.030 Sum_probs=30.6
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~ 81 (461)
+++|.|||+|.-|.+.|..|++. | ++|++++++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~-g-----~~v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARY-M-----LKTLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESS
T ss_pred ccCEEEECccHHHHHHHHHHHHC-C-----CcEEEEecc
Confidence 46899999999999999999999 8 899999986
No 386
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=92.65 E-value=0.14 Score=45.75 Aligned_cols=36 Identities=22% Similarity=0.240 Sum_probs=32.8
Q ss_pred ceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhh
Q 012547 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (461)
Q Consensus 44 mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (461)
|+|.|.|+ |.+|.+++..|.+. | ++|++++|+++..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~-g-----~~V~~~~r~~~~~ 40 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQA-G-----YEVTVLVRDSSRL 40 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT-T-----CEEEEEESCGGGS
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC-C-----CeEEEEEeChhhc
Confidence 79999998 99999999999999 8 9999999987643
No 387
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=92.59 E-value=0.2 Score=49.04 Aligned_cols=33 Identities=21% Similarity=0.268 Sum_probs=27.6
Q ss_pred CCceEEEECccH-HHHHHHHHHHHhcCCCCCCeeEEEEec
Q 012547 42 DPLRIVGVGAGA-WGSVFTAMLQDSYGYLRDKVLIRIWRR 80 (461)
Q Consensus 42 ~~mkI~IIGaGa-mG~alA~~La~~~G~~~~~~~V~l~~r 80 (461)
.-.++.|||.|. +|..+|..|... | ..|++..+
T Consensus 160 ~Gk~vvVIG~s~iVG~p~A~lL~~~-g-----AtVtv~hs 193 (285)
T 3l07_A 160 EGAYAVVVGASNVVGKPVSQLLLNA-K-----ATVTTCHR 193 (285)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHT-T-----CEEEEECT
T ss_pred CCCEEEEECCCchhHHHHHHHHHHC-C-----CeEEEEeC
Confidence 347899999887 799999999988 7 78888754
No 388
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=92.58 E-value=0.24 Score=51.62 Aligned_cols=89 Identities=17% Similarity=0.176 Sum_probs=61.1
Q ss_pred CceEEEECcc----HHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhhhhhhhHHHHHhhhhhhHHhhhhcccccchhh
Q 012547 43 PLRIVGVGAG----AWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVE 118 (461)
Q Consensus 43 ~mkI~IIGaG----amG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~~~~~~l~~~i~~~~~~~~~~~~n~~~l~~~~ 118 (461)
+.+|+|||++ .+|..+...|.+. | ...|..++...+.+ .
T Consensus 8 p~siAVvGas~~~~~~g~~v~~~l~~~-g----~~~v~pVnP~~~~i-----------------------------~--- 50 (457)
T 2csu_A 8 PKGIAVIGASNDPKKLGYEVFKNLKEY-K----KGKVYPVNIKEEEV-----------------------------Q--- 50 (457)
T ss_dssp CSEEEEETCCSCTTSHHHHHHHHHTTC-C----SSEEEEECSSCSEE-----------------------------T---
T ss_pred CCeEEEECcCCCCCchHHHHHHHHHHc-C----CCEEEEECCCCCeE-----------------------------C---
Confidence 5789999998 7899999988765 4 15665555442111 0
Q ss_pred hhccCCccchhhhhhhcccccCCCCCCCCeEEecCHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEee
Q 012547 119 ARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAK 198 (461)
Q Consensus 119 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~t~dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tk 198 (461)
++.+..+++++....|+++++||+....++++++... . -..++.++.
T Consensus 51 ----------------------------G~~~y~sl~~lp~~~Dlavi~vp~~~~~~~v~e~~~~-G----i~~vv~~s~ 97 (457)
T 2csu_A 51 ----------------------------GVKAYKSVKDIPDEIDLAIIVVPKRFVKDTLIQCGEK-G----VKGVVIITA 97 (457)
T ss_dssp ----------------------------TEECBSSTTSCSSCCSEEEECSCHHHHHHHHHHHHHH-T----CCEEEECCC
T ss_pred ----------------------------CEeccCCHHHcCCCCCEEEEecCHHHHHHHHHHHHHc-C----CCEEEEecC
Confidence 1223344444445789999999999999999988753 2 235677888
Q ss_pred cCc
Q 012547 199 GVE 201 (461)
Q Consensus 199 Gi~ 201 (461)
|+.
T Consensus 98 G~~ 100 (457)
T 2csu_A 98 GFG 100 (457)
T ss_dssp SST
T ss_pred CCC
Confidence 985
No 389
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=92.58 E-value=0.11 Score=53.32 Aligned_cols=35 Identities=26% Similarity=0.365 Sum_probs=31.5
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCe--eEEEEecCc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPG 82 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~--~V~l~~r~~ 82 (461)
..++|+|||+|..|.+.|..|++. | . +|+++.++.
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~-G-----~~~~V~v~E~~~ 41 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAE-K-----AFDQVTLFERRG 41 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT-T-----CCSEEEEECSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhc-C-----CCCCeEEEecCC
Confidence 357999999999999999999998 8 7 999999875
No 390
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=92.56 E-value=0.12 Score=54.79 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=31.4
Q ss_pred CCceEEEECccHHHHHHHHHHHH---hcCCCCCCeeEEEEecCc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQD---SYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~---~~G~~~~~~~V~l~~r~~ 82 (461)
..++|+|||+|..|.+.|..|++ . | .+|+++++.+
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~-G-----~~V~liE~~~ 61 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQG-T-----ADITLLQAPD 61 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTT-S-----SEEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCC-C-----CcEEEEeCCC
Confidence 35689999999999999999999 7 7 8999999864
No 391
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=92.54 E-value=0.11 Score=51.10 Aligned_cols=56 Identities=25% Similarity=0.284 Sum_probs=41.3
Q ss_pred ccccchh--HHhhHHHHHhhcCCCCCCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 19 HHTNGSL--EERLDELRRLMGKAEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 19 ~~~~~~~--~~~~~~~~~~~~~~~~~~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
||..||. +++...+...+.+. +|+|.|.|+ |.+|.+++..|++. | ++|++.+|+..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~---~~~vlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~ 62 (352)
T 1sb8_A 4 HHHHGSMGMMSRYEELRKELPAQ---PKVWLITGVAGFIGSNLLETLLKL-D-----QKVVGLDNFAT 62 (352)
T ss_dssp --------CCCHHHHHHHHHHHS---CCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEECCSS
T ss_pred cccccchHHHHHHHhhchhcCcc---CCeEEEECCCcHHHHHHHHHHHHC-C-----CEEEEEeCCCc
Confidence 5556664 66777777777654 379999998 99999999999998 8 89999999753
No 392
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=92.47 E-value=0.11 Score=51.45 Aligned_cols=34 Identities=24% Similarity=0.262 Sum_probs=30.9
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
.++|+|||+|..|.+.|..|++. | .+|+++++..
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~-G-----~~V~vie~~~ 36 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQ-G-----VKTLLVDAFD 36 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-C-----CeEEEEeCCC
Confidence 35899999999999999999999 8 8999998764
No 393
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=92.46 E-value=0.11 Score=50.70 Aligned_cols=34 Identities=18% Similarity=0.266 Sum_probs=31.2
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
...|.|||+|..|.+.|..|++. | ++|++++++.
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~~-G-----~~V~vlE~~~ 37 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAAG-G-----HEVLVAEAAE 37 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-C-----CeEEEEeCCC
Confidence 35899999999999999999999 8 8999999874
No 394
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=92.43 E-value=0.16 Score=50.19 Aligned_cols=33 Identities=21% Similarity=0.238 Sum_probs=28.5
Q ss_pred CceEEEECccH-HHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 012547 43 PLRIVGVGAGA-WGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (461)
Q Consensus 43 ~mkI~IIGaGa-mG~alA~~La~~~G~~~~~~~V~l~~r~ 81 (461)
-.++.|||.|. +|..+|..|... | .+|+++.+.
T Consensus 165 Gk~vvVIG~s~iVG~p~A~lL~~~-g-----AtVtv~~~~ 198 (300)
T 4a26_A 165 GKRAVVLGRSNIVGAPVAALLMKE-N-----ATVTIVHSG 198 (300)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHT-T-----CEEEEECTT
T ss_pred CCEEEEECCCchHHHHHHHHHHHC-C-----CeEEEEeCC
Confidence 36899999876 799999999988 7 889998764
No 395
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=92.40 E-value=0.26 Score=48.59 Aligned_cols=34 Identities=15% Similarity=0.069 Sum_probs=28.6
Q ss_pred CCCceEEEECccH-HHHHHHHHHHHhcCCCCCCeeEEEEec
Q 012547 41 GDPLRIVGVGAGA-WGSVFTAMLQDSYGYLRDKVLIRIWRR 80 (461)
Q Consensus 41 ~~~mkI~IIGaGa-mG~alA~~La~~~G~~~~~~~V~l~~r 80 (461)
....+++|||+|. +|..+|..|... | ..|+++.+
T Consensus 163 l~gk~vvVIG~s~iVG~p~A~lL~~~-g-----AtVtv~hs 197 (301)
T 1a4i_A 163 IAGRHAVVVGRSKIVGAPMHDLLLWN-N-----ATVTTCHS 197 (301)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHT-T-----CEEEEECT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhC-C-----CeEEEEEC
Confidence 3457999999996 799999999988 7 78998853
No 396
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=92.31 E-value=0.13 Score=51.64 Aligned_cols=35 Identities=31% Similarity=0.449 Sum_probs=32.1
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
.++|+|||+|..|.++|..|++. | .+|+++.+.+.
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~-G-----~~v~v~E~~~~ 39 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDA-G-----VDVDVYERSPQ 39 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhC-C-----CCEEEEecCCC
Confidence 46899999999999999999999 8 89999998764
No 397
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=92.29 E-value=0.13 Score=48.44 Aligned_cols=33 Identities=12% Similarity=0.049 Sum_probs=30.2
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
.+|+|||+|.-|.+.|..|++. | ++|++++++.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~-g-----~~v~lie~~~ 35 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRA-R-----KNILLVDAGE 35 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEECCC
T ss_pred CCEEEECCCHHHHHHHHHHHhC-C-----CCEEEEeCCC
Confidence 5899999999999999999999 8 8999999753
No 398
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=92.28 E-value=0.09 Score=54.25 Aligned_cols=34 Identities=21% Similarity=0.264 Sum_probs=30.6
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
|++|+|||+|.-|.+-|..|+++ | ++|+++.++.
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~-G-----~~V~VlEa~~ 34 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAA-G-----IPVLLLEQRD 34 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHT-T-----CCEEEECCC-
T ss_pred CCCEEEECCcHHHHHHHHHHHHC-C-----CcEEEEccCC
Confidence 46899999999999999999999 8 9999998764
No 399
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=92.23 E-value=0.16 Score=49.70 Aligned_cols=47 Identities=17% Similarity=0.132 Sum_probs=36.8
Q ss_pred hhHHHHHhhcCCCCCCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 28 RLDELRRLMGKAEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 28 ~~~~~~~~~~~~~~~~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
+++|.-..|.| .+|+|.|.|+ |.+|++++..|.+. | ++|++.+|+..
T Consensus 13 ~~~~~~~~~~~---~~~~vlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~ 60 (351)
T 3ruf_A 13 RYEEITQQLIF---SPKTWLITGVAGFIGSNLLEKLLKL-N-----QVVIGLDNFST 60 (351)
T ss_dssp HHHHHHHHHHH---SCCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEECCSS
T ss_pred HHhhHHhhCCC---CCCeEEEECCCcHHHHHHHHHHHHC-C-----CEEEEEeCCCC
Confidence 34444444433 2479999996 99999999999998 8 99999999764
No 400
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=92.22 E-value=0.096 Score=55.51 Aligned_cols=35 Identities=14% Similarity=0.139 Sum_probs=31.8
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
..+|.|||+|..|.++|..|++. | .+|+++++...
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~-G-----~~V~vlEr~~~ 60 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHR-Q-----VGHLVVEQTDG 60 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEeCCCC
Confidence 46899999999999999999999 8 89999998764
No 401
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=92.12 E-value=0.36 Score=48.47 Aligned_cols=38 Identities=13% Similarity=-0.001 Sum_probs=28.7
Q ss_pred HhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecC
Q 012547 157 AVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 157 av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi 200 (461)
.+.++|+||+|+|...-++.+..+. .. +..+|+++.-+
T Consensus 60 ~~~~~Dvvf~a~~~~~s~~~a~~~~---~~---G~~vID~Sa~~ 97 (344)
T 3tz6_A 60 DPSGLDIALFSAGSAMSKVQAPRFA---AA---GVTVIDNSSAW 97 (344)
T ss_dssp CCTTCSEEEECSCHHHHHHHHHHHH---HT---TCEEEECSSTT
T ss_pred HhccCCEEEECCChHHHHHHHHHHH---hC---CCEEEECCCcc
Confidence 3578999999999988888777654 33 57788877543
No 402
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=92.03 E-value=0.1 Score=51.31 Aligned_cols=33 Identities=12% Similarity=0.188 Sum_probs=30.4
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
..|+|||+|..|.+.|..|++. | .+|+++++..
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~-G-----~~V~vle~~~ 35 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRA-G-----LNVLMTDAHM 35 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHT-T-----CCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHHC-C-----CeEEEEecCC
Confidence 5799999999999999999999 8 8999999864
No 403
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=92.03 E-value=0.33 Score=47.64 Aligned_cols=36 Identities=22% Similarity=0.176 Sum_probs=29.4
Q ss_pred CCCCceEEEECccH-HHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 012547 40 EGDPLRIVGVGAGA-WGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (461)
Q Consensus 40 ~~~~mkI~IIGaGa-mG~alA~~La~~~G~~~~~~~V~l~~r~ 81 (461)
+....+++|||+|. .|..+|..|... | ..|+++.+.
T Consensus 156 ~l~gk~vvVIG~s~iVG~p~A~lL~~~-g-----AtVtv~hs~ 192 (288)
T 1b0a_A 156 DTFGLNAVVIGASNIVGRPMSMELLLA-G-----CTTTVTHRF 192 (288)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHTT-T-----CEEEEECSS
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHC-C-----CeEEEEeCC
Confidence 33457999999996 699999999988 7 889988543
No 404
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=91.97 E-value=0.61 Score=39.51 Aligned_cols=35 Identities=17% Similarity=0.195 Sum_probs=26.5
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEE-ecC
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIW-RRP 81 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~-~r~ 81 (461)
+..++.|+|+|..|..++..+.++.| ++|..+ +.+
T Consensus 3 ~~~~vlIiGaG~~g~~l~~~l~~~~g-----~~vvg~~d~~ 38 (141)
T 3nkl_A 3 AKKKVLIYGAGSAGLQLANMLRQGKE-----FHPIAFIDDD 38 (141)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHSSS-----EEEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-----cEEEEEEECC
Confidence 45789999999999999999986524 666544 433
No 405
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=91.92 E-value=0.33 Score=55.52 Aligned_cols=56 Identities=18% Similarity=0.136 Sum_probs=42.5
Q ss_pred HHhhHHHHHhhcCCCCC---CceEEEECccHHHHHHHHHHHHhcCCC-CCCeeEEEEecCc
Q 012547 26 EERLDELRRLMGKAEGD---PLRIVGVGAGAWGSVFTAMLQDSYGYL-RDKVLIRIWRRPG 82 (461)
Q Consensus 26 ~~~~~~~~~~~~~~~~~---~mkI~IIGaGamG~alA~~La~~~G~~-~~~~~V~l~~r~~ 82 (461)
.+|.+...+++|...-. ..||.|||+|..|+.++..|+.. |.- .++.+++++|.+.
T Consensus 405 ~~Ry~rq~~l~G~~~q~kL~~~~VlvVGaGGlGsevlk~La~~-Gv~~g~~G~i~lvD~D~ 464 (1015)
T 3cmm_A 405 NSRYDNQIAVFGLDFQKKIANSKVFLVGSGAIGCEMLKNWALL-GLGSGSDGYIVVTDNDS 464 (1015)
T ss_dssp SSTTHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHH-TTTCSTTCEEEEECCCB
T ss_pred hhhhhhHHHhcCHHHHHHHhcCeEEEEecCHHHHHHHHHHHHc-CcCcCCCCeEEEEeCCE
Confidence 46888888888754322 37999999999999999999999 820 1114899999775
No 406
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=91.91 E-value=0.13 Score=50.82 Aligned_cols=34 Identities=21% Similarity=0.264 Sum_probs=30.9
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
..+|+|||+|..|.+.|..|++. | ++|++++++.
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~-G-----~~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKR-G-----EEVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-C-----CeEEEEeCCC
Confidence 35799999999999999999999 8 8999999863
No 407
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=91.90 E-value=0.61 Score=53.34 Aligned_cols=52 Identities=12% Similarity=0.135 Sum_probs=39.1
Q ss_pred HHhhHHHHHhhcCCCC---CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 26 EERLDELRRLMGKAEG---DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 26 ~~~~~~~~~~~~~~~~---~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
++|.+.-.+++|...- ...+|+|||+|..|+.+|..|+.. |. ..++++|.+.
T Consensus 7 ~~rY~Rqi~l~G~~~q~rL~~s~VlIvG~GGlGseiak~La~a-GV----g~itlvD~D~ 61 (1015)
T 3cmm_A 7 ESLYSRQLYVLGKEAMLKMQTSNVLILGLKGLGVEIAKNVVLA-GV----KSMTVFDPEP 61 (1015)
T ss_dssp HHHHHHHHHHSCHHHHHHHTTCEEEEECCSHHHHHHHHHHHHH-CC----SEEEEECCSB
T ss_pred hHhccchHhhcCHHHHHHHhcCEEEEECCChHHHHHHHHHHHc-CC----CeEEEecCCE
Confidence 4556655555543321 236899999999999999999999 83 6899999875
No 408
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=91.86 E-value=0.14 Score=49.52 Aligned_cols=33 Identities=15% Similarity=0.159 Sum_probs=30.4
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~ 81 (461)
..+|+|||+|.-|.+.|..|++. | ++|++++++
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~-g-----~~v~lie~~ 40 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRA-Q-----LSTLILEKG 40 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHHc-C-----CcEEEEeCC
Confidence 45899999999999999999998 8 899999987
No 409
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=91.86 E-value=0.25 Score=48.44 Aligned_cols=32 Identities=25% Similarity=0.268 Sum_probs=27.1
Q ss_pred CceEEEECccH-HHHHHHHHHHHhcCCCCCCeeEEEEec
Q 012547 43 PLRIVGVGAGA-WGSVFTAMLQDSYGYLRDKVLIRIWRR 80 (461)
Q Consensus 43 ~mkI~IIGaGa-mG~alA~~La~~~G~~~~~~~V~l~~r 80 (461)
-.+++|||.|. +|..+|..|... | ..|++..+
T Consensus 161 Gk~vvVvGrs~iVG~plA~lL~~~-g-----AtVtv~hs 193 (286)
T 4a5o_A 161 GMDAVVVGASNIVGRPMALELLLG-G-----CTVTVTHR 193 (286)
T ss_dssp TCEEEEECTTSTTHHHHHHHHHHT-T-----CEEEEECT
T ss_pred CCEEEEECCCchhHHHHHHHHHHC-C-----CeEEEEeC
Confidence 36899999876 899999999988 7 88988754
No 410
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=91.83 E-value=0.11 Score=49.93 Aligned_cols=35 Identities=9% Similarity=0.061 Sum_probs=31.5
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
++++|+|||+|..|.+.|..|++. | ++|+++++.+
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~-g-----~~v~vie~~~ 55 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARA-E-----IKPILYEGMM 55 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-T-----CCCEEECCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEecCC
Confidence 457899999999999999999999 8 8999999853
No 411
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=91.82 E-value=0.12 Score=51.60 Aligned_cols=35 Identities=17% Similarity=0.323 Sum_probs=31.9
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
.++|+|||+|..|.++|..|++. | .+|+++++++.
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~-G-----~~V~viE~~~~ 40 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQ-G-----HRVVVVEQARR 40 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-C-----CcEEEEeCCCC
Confidence 46899999999999999999999 8 89999998754
No 412
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=91.74 E-value=0.15 Score=52.48 Aligned_cols=35 Identities=20% Similarity=0.255 Sum_probs=31.4
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
..++|+|||+|..|.+.|..|++. | ++|+++.++.
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~-g-----~~v~v~E~~~ 44 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKA-G-----YKVTVLEART 44 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-C-----CCEEEEeccC
Confidence 357999999999999999999999 8 8999998764
No 413
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=91.72 E-value=0.14 Score=51.02 Aligned_cols=34 Identities=24% Similarity=0.377 Sum_probs=31.3
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
.+|.|||+|..|.++|..|++. | .+|+++.+...
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~-G-----~~v~v~E~~~~ 36 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKA-G-----IDNVILERQTP 36 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-T-----CCEEEECSSCH
T ss_pred ccEEEECCCHHHHHHHHHHHHC-C-----CCEEEEeCCCC
Confidence 4799999999999999999999 8 89999998764
No 414
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=91.72 E-value=0.16 Score=50.53 Aligned_cols=35 Identities=20% Similarity=0.261 Sum_probs=31.8
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
.++|+|||+|..|.++|..|++. | .+|++++++..
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~-G-----~~v~viE~~~~ 45 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQN-G-----WDVRLHEKSSE 45 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-C-----CCEEEEecCCC
Confidence 46899999999999999999999 8 89999998754
No 415
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=91.67 E-value=0.13 Score=52.50 Aligned_cols=34 Identities=15% Similarity=0.132 Sum_probs=30.7
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCe--eEEEEecCc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV--LIRIWRRPG 82 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~--~V~l~~r~~ 82 (461)
+++|+|||+|..|.+.|..|++. | + +|+++..+.
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~-G-----~~~~V~vlEa~~ 37 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRA-P-----CPPKVVLVESSE 37 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTS-S-----SCCEEEEECSSS
T ss_pred CceEEEECCcHHHHHHHHHHHhC-C-----CCCcEEEEeCCC
Confidence 36899999999999999999999 8 7 999998754
No 416
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=91.64 E-value=0.16 Score=51.18 Aligned_cols=35 Identities=9% Similarity=0.048 Sum_probs=30.9
Q ss_pred CceEEEECccHHHHHHHHHHHH---hcCCCCCCeeEEEEecCch
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQD---SYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~---~~G~~~~~~~V~l~~r~~~ 83 (461)
|++|+|||+|..|.+.|..|++ . | ++|++++++..
T Consensus 1 m~~VvIIGgG~aGl~aA~~L~~~~~~-g-----~~V~vie~~~~ 38 (409)
T 3h8l_A 1 MTKVLVLGGRFGALTAAYTLKRLVGS-K-----ADVKVINKSRF 38 (409)
T ss_dssp -CEEEEECSSHHHHHHHHHHHHHHGG-G-----SEEEEEESSSE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCC-C-----CeEEEEeCCCC
Confidence 3689999999999999999999 6 6 89999998763
No 417
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=91.62 E-value=0.26 Score=49.33 Aligned_cols=23 Identities=22% Similarity=0.245 Sum_probs=20.9
Q ss_pred CceEEEECccHHHHHHHHHHHHh
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDS 65 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~ 65 (461)
++||+|+|+|.+|..+++.|..+
T Consensus 3 ~ikVgI~G~G~iGr~~~R~l~~~ 25 (335)
T 1u8f_O 3 KVKVGVNGFGRIGRLVTRAAFNS 25 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH
T ss_pred ceEEEEEccCHHHHHHHHHHHcC
Confidence 36999999999999999999876
No 418
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=91.61 E-value=0.41 Score=48.23 Aligned_cols=40 Identities=18% Similarity=0.354 Sum_probs=29.9
Q ss_pred CHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCCEEEEEeecC
Q 012547 153 NLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGV 200 (461)
Q Consensus 153 dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~iIIs~tkGi 200 (461)
|.++...++|++|+|+|...-+++..++ . +..||+++.-+
T Consensus 71 ~~~~~~~~~Dvvf~alp~~~s~~~~~~~-----~---g~~VIDlSsdf 110 (351)
T 1vkn_A 71 DPEKVSKNCDVLFTALPAGASYDLVREL-----K---GVKIIDLGADF 110 (351)
T ss_dssp CHHHHHHHCSEEEECCSTTHHHHHHTTC-----C---SCEEEESSSTT
T ss_pred CHHHhhcCCCEEEECCCcHHHHHHHHHh-----C---CCEEEECChhh
Confidence 4444347899999999999888877665 3 67888887544
No 419
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=91.59 E-value=0.15 Score=50.88 Aligned_cols=33 Identities=21% Similarity=0.292 Sum_probs=30.6
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
..|+|||+|..|.+.|..|++. | .+|+++++..
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~-G-----~~V~vlE~~~ 37 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAER-G-----HRVLVLERHT 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHC-C-----CeEEEEeCCC
Confidence 5799999999999999999999 8 8999999865
No 420
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=91.51 E-value=0.28 Score=46.86 Aligned_cols=37 Identities=27% Similarity=0.386 Sum_probs=32.2
Q ss_pred CceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchh
Q 012547 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (461)
Q Consensus 43 ~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (461)
+|+|.|.|+ |.+|.+++..|.+. | .++|++.+|+++.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~-g----~~~V~~~~R~~~~ 42 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLED-G----TFKVRVVTRNPRK 42 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH-C----SSEEEEEESCTTS
T ss_pred CCEEEEECCCchHHHHHHHHHHhc-C----CceEEEEEcCCCC
Confidence 478999998 99999999999987 5 2799999998754
No 421
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=91.50 E-value=0.42 Score=47.78 Aligned_cols=23 Identities=30% Similarity=0.683 Sum_probs=20.5
Q ss_pred CceEEEEC-ccHHHHHHHHHHHHh
Q 012547 43 PLRIVGVG-AGAWGSVFTAMLQDS 65 (461)
Q Consensus 43 ~mkI~IIG-aGamG~alA~~La~~ 65 (461)
+|||+|+| .|.+|..+...|.+.
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~ 29 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDER 29 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHT
T ss_pred CcEEEEECCCCHHHHHHHHHHHhC
Confidence 47999999 699999999999865
No 422
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=91.46 E-value=0.57 Score=46.49 Aligned_cols=37 Identities=22% Similarity=0.241 Sum_probs=32.6
Q ss_pred CceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhh
Q 012547 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (461)
Q Consensus 43 ~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (461)
.|+|.|.|+ |.+|.+++..|++. | ++|++.+|+.+..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~-g-----~~V~~~~R~~~~~ 42 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAV-G-----HHVRAQVHSLKGL 42 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHT-T-----CCEEEEESCSCSH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC-C-----CEEEEEECCCChh
Confidence 478999996 99999999999998 8 8999999987643
No 423
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=91.35 E-value=0.29 Score=51.36 Aligned_cols=36 Identities=31% Similarity=0.376 Sum_probs=33.0
Q ss_pred CceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchh
Q 012547 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (461)
Q Consensus 43 ~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (461)
+|||.|.|+ |.+|++++..|.+. | ++|++++|+...
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~-G-----~~V~~l~R~~~~ 183 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTG-G-----HEVIQLVRKEPK 183 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT-T-----CEEEEEESSSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC-C-----CEEEEEECCCCC
Confidence 789999995 99999999999999 8 999999998753
No 424
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=91.33 E-value=0.14 Score=51.33 Aligned_cols=33 Identities=24% Similarity=0.516 Sum_probs=30.8
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
++|+|||+|..|.+.|..|++. | .+|+++.++.
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~-G-----~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKS-G-----FKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTT-T-----CCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhC-C-----CCEEEEeCCC
Confidence 6899999999999999999999 8 8999999874
No 425
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=91.31 E-value=0.18 Score=50.22 Aligned_cols=54 Identities=19% Similarity=0.169 Sum_probs=34.5
Q ss_pred hHHhhHHHHHhhcCCCCCCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 25 LEERLDELRRLMGKAEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
+--|-+-+.+.|.+..-.+|+|.|.|+ |.+|.+++..|.+. | .++|++++|+..
T Consensus 14 ~~~~~~~m~~~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~-g----~~~V~~~~r~~~ 68 (377)
T 2q1s_A 14 LVPRGSHMPVIMNASKLANTNVMVVGGAGFVGSNLVKRLLEL-G----VNQVHVVDNLLS 68 (377)
T ss_dssp ------------CCGGGTTCEEEEETTTSHHHHHHHHHHHHT-T----CSEEEEECCCTT
T ss_pred cccccccCCCCCChHHhCCCEEEEECCccHHHHHHHHHHHHc-C----CceEEEEECCCC
Confidence 444555566666544445689999997 99999999999988 5 278999998764
No 426
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=91.30 E-value=0.26 Score=51.72 Aligned_cols=35 Identities=26% Similarity=0.160 Sum_probs=32.0
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
..++|+|||+|..|.+.|..|++. | ++|++++++.
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~-G-----~~V~liE~~~ 76 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAM-G-----GRQLIVDRWP 76 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-C-----CCEEEEeCCC
Confidence 347899999999999999999999 8 8999999886
No 427
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=91.28 E-value=1.1 Score=45.35 Aligned_cols=39 Identities=18% Similarity=0.222 Sum_probs=28.4
Q ss_pred CHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCC--CEEEEEee
Q 012547 153 NLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITV--PVIISLAK 198 (461)
Q Consensus 153 dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~--~iIIs~tk 198 (461)
+.++ +.++|+||+|+|...-++++..+.. . + ..||+++.
T Consensus 58 ~~~~-~~~~Dvvf~a~~~~~s~~~~~~~~~---~---G~k~~VID~ss 98 (370)
T 3pzr_A 58 DIES-LKQLDAVITCQGGSYTEKVYPALRQ---A---GWKGYWIDAAS 98 (370)
T ss_dssp CHHH-HTTCSEEEECSCHHHHHHHHHHHHH---T---TCCCEEEECSS
T ss_pred ChhH-hccCCEEEECCChHHHHHHHHHHHH---C---CCCEEEEeCCc
Confidence 4443 6789999999999888887776543 2 3 47887764
No 428
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=91.28 E-value=0.19 Score=50.68 Aligned_cols=34 Identities=29% Similarity=0.405 Sum_probs=31.3
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
|+|+|||+|..|.+.|..|++. | ++|+++.++..
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~-g-----~~v~v~E~~~~ 37 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEK-G-----HQVHIIDQRDH 37 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-T-----CEEEEEESSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHC-C-----CcEEEEEecCC
Confidence 7999999999999999999998 8 99999998753
No 429
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=91.18 E-value=0.17 Score=49.98 Aligned_cols=34 Identities=18% Similarity=0.231 Sum_probs=31.3
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
..|+|||+|..|.+.|..|++. | .+|++++++..
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~-G-----~~V~l~E~~~~ 38 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKY-G-----LKTLMIEKRPE 38 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEeCCCC
Confidence 5799999999999999999999 8 89999998863
No 430
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=91.11 E-value=0.36 Score=49.82 Aligned_cols=35 Identities=26% Similarity=0.372 Sum_probs=31.4
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
.+++|+|||+|..|.+.|..|++. | ++|+++.++.
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~-g-----~~v~vlE~~~ 66 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGA-G-----HQVTVLEASE 66 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHH-T-----CEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-C-----CeEEEEECCC
Confidence 357899999999999999999999 8 8999998764
No 431
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=91.09 E-value=0.2 Score=50.51 Aligned_cols=34 Identities=21% Similarity=0.345 Sum_probs=31.3
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCee-EEEEecCch
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL-IRIWRRPGR 83 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~-V~l~~r~~~ 83 (461)
++|+|||+|..|.++|..|++. | .+ |+++.+...
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~-G-----~~~v~v~E~~~~ 39 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQA-G-----IGKVTLLESSSE 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CSEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC-C-----CCeEEEEECCCC
Confidence 6899999999999999999999 8 88 999998754
No 432
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=91.07 E-value=0.19 Score=47.84 Aligned_cols=34 Identities=15% Similarity=0.203 Sum_probs=30.5
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEE-EecC
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRI-WRRP 81 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l-~~r~ 81 (461)
.+++|+|||+|.-|.+.|..|++. | ++|++ ++++
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~-g-----~~v~li~e~~ 37 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRG-G-----LKNVVMFEKG 37 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHH-T-----CSCEEEECSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHC-C-----CCeEEEEeCC
Confidence 457999999999999999999999 8 89999 8873
No 433
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=91.06 E-value=0.17 Score=51.94 Aligned_cols=36 Identities=11% Similarity=0.229 Sum_probs=31.9
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
....|.|||+|..|.+.|..|++. | .+|+++++.+.
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~-G-----~~V~llEk~~~ 60 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEE-G-----ANVLLLDKGNK 60 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC-C-----CCEEEEECCCC
Confidence 345799999999999999999999 8 89999998764
No 434
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=91.05 E-value=0.34 Score=50.70 Aligned_cols=37 Identities=19% Similarity=0.155 Sum_probs=32.8
Q ss_pred CCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 41 GDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 41 ~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
....+|+|||+|..|.++|..|++. | .+|+++.+.+.
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~-G-----~~V~liEk~~~ 126 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALL-G-----ARVVLVEKRIK 126 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHT-T-----CEEEEEESCSS
T ss_pred cCCCCEEEECccHHHHHHHHHHHHC-C-----CeEEEEEeccc
Confidence 3457999999999999999999999 8 89999998753
No 435
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=91.04 E-value=0.35 Score=51.16 Aligned_cols=38 Identities=21% Similarity=0.240 Sum_probs=32.3
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (461)
+++.|+|+|.+|.+++..|++. | .+|++++|+.++++.
T Consensus 365 k~vlV~GaGGig~aia~~L~~~-G-----~~V~i~~R~~~~a~~ 402 (523)
T 2o7s_A 365 KTVVVIGAGGAGKALAYGAKEK-G-----AKVVIANRTYERALE 402 (523)
T ss_dssp -CEEEECCSHHHHHHHHHHHHH-C-----C-CEEEESSHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHC-C-----CEEEEEECCHHHHHH
Confidence 5799999999999999999999 8 789999999876553
No 436
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=91.01 E-value=0.97 Score=45.94 Aligned_cols=40 Identities=18% Similarity=0.268 Sum_probs=28.8
Q ss_pred CHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCC--CEEEEEeec
Q 012547 153 NLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITV--PVIISLAKG 199 (461)
Q Consensus 153 dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~--~iIIs~tkG 199 (461)
+.++ +.++|+||+|+|...-++++..+.. . + ..||+++.-
T Consensus 62 ~~~~-~~~vDvvf~a~~~~~s~~~~~~~~~---~---G~k~~VID~ss~ 103 (377)
T 3uw3_A 62 SIDD-LKKCDVIITCQGGDYTNDVFPKLRA---A---GWNGYWIDAASS 103 (377)
T ss_dssp CHHH-HHTCSEEEECSCHHHHHHHHHHHHH---T---TCCSEEEECSST
T ss_pred ChhH-hcCCCEEEECCChHHHHHHHHHHHH---C---CCCEEEEeCCcc
Confidence 4443 5789999999999888887776543 2 3 378887643
No 437
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=90.94 E-value=0.19 Score=52.83 Aligned_cols=35 Identities=23% Similarity=0.334 Sum_probs=31.2
Q ss_pred CCceEEEECccHHHHHHHHHHHH------------hcCCCCCCeeEEEEecCc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQD------------SYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~------------~~G~~~~~~~V~l~~r~~ 82 (461)
..++|+|||+|.-|.+.|..|++ . | .+|+|+.++.
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~-G-----~~V~liE~~~ 52 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSP-K-----LNITLIESPD 52 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSC-S-----CEEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCC-C-----CeEEEEeCCC
Confidence 34689999999999999999999 7 7 8999999764
No 438
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=90.82 E-value=0.94 Score=50.25 Aligned_cols=34 Identities=24% Similarity=0.358 Sum_probs=30.7
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
.||.|||+|..|+.++..|+.. |. .+++++|.+.
T Consensus 412 ~~vlvvG~GglG~~~~~~L~~~-Gv----g~i~l~D~d~ 445 (805)
T 2nvu_B 412 CKVLVIGAGGLGCELLKNLALS-GF----RQIHVIDMDT 445 (805)
T ss_dssp CCEEEECCSSHHHHHHHHHHTT-TC----CEEEEEECCB
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CC----CcEEEECCCe
Confidence 5899999999999999999999 82 5899999875
No 439
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=90.79 E-value=0.21 Score=48.99 Aligned_cols=38 Identities=18% Similarity=0.286 Sum_probs=30.2
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCC-CCCCeeEEEEecCc
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGY-LRDKVLIRIWRRPG 82 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~-~~~~~~V~l~~r~~ 82 (461)
|.|+|||+|..|.+.|..|++. |. ..++.+|+++++..
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~-G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHER-YHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-HTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHh-ccccCCCceEEEEECCC
Confidence 6899999999999999999998 40 00116899999874
No 440
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=90.74 E-value=0.34 Score=47.01 Aligned_cols=63 Identities=16% Similarity=0.259 Sum_probs=33.9
Q ss_pred ccccchhHHhhHHHHHhhc-----------CCCCCCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012547 19 HHTNGSLEERLDELRRLMG-----------KAEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (461)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~-----------~~~~~~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (461)
||.-|.||..+..-=+++- |.+-..++|.|.|+ |.+|.++|..|++. | ++|.+.+|+.+.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~l~~k~vlVTGas~GIG~aia~~la~~-G-----~~V~~~~r~~~~~~ 79 (293)
T 3rih_A 6 HHHMGTLEAQTQGPGSMLVVESAEPAERKVMFDLSARSVLVTGGTKGIGRGIATVFARA-G-----ANVAVAARSPRELS 79 (293)
T ss_dssp ----------------------------CCTTCCTTCEEEETTTTSHHHHHHHHHHHHT-T-----CEEEEEESSGGGGH
T ss_pred ccccchhhhhhcCCceeeeecCCCCcccccccCCCCCEEEEeCCCcHHHHHHHHHHHHC-C-----CEEEEEECCHHHHH
Confidence 5666777765544211111 12222356778886 78999999999999 8 89999999987655
Q ss_pred h
Q 012547 87 R 87 (461)
Q Consensus 87 ~ 87 (461)
.
T Consensus 80 ~ 80 (293)
T 3rih_A 80 S 80 (293)
T ss_dssp H
T ss_pred H
Confidence 3
No 441
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=90.66 E-value=0.2 Score=52.17 Aligned_cols=34 Identities=18% Similarity=0.210 Sum_probs=29.6
Q ss_pred CceEEEECccHHHHHHHHHHHH---hcCCCCCCeeEEEEecCc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQD---SYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~---~~G~~~~~~~V~l~~r~~ 82 (461)
+++|+|||+|..|.+.|..|++ . | .+|+++.+..
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~-G-----~~V~lvE~~~ 38 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDD-R-----IDVTLVESGN 38 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGG-G-----SEEEEEEC--
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCC-C-----CEEEEEecCC
Confidence 3589999999999999999999 8 7 8999998864
No 442
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=90.63 E-value=0.22 Score=48.17 Aligned_cols=34 Identities=21% Similarity=0.150 Sum_probs=31.1
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
+++|+|||+|.-|.+.|..|++. | ++|++++++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~-g-----~~v~lie~~~ 38 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMR-G-----LSFRFVDPLP 38 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESSS
T ss_pred cCcEEEECCCHHHHHHHHHHHhC-C-----CCEEEEeCCC
Confidence 46899999999999999999998 8 8999999875
No 443
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=90.40 E-value=0.34 Score=50.27 Aligned_cols=35 Identities=26% Similarity=0.407 Sum_probs=29.5
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEe----cC
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWR----RP 81 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~----r~ 81 (461)
.||.|+|+|..|.+++..|... |.- ..+|++++ |+
T Consensus 187 ~rvlvlGAGgAg~aia~~L~~~-G~~--~~~I~vvd~~~~R~ 225 (439)
T 2dvm_A 187 ITLALFGAGAAGFATLRILTEA-GVK--PENVRVVELVNGKP 225 (439)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCC--GGGEEEEEEETTEE
T ss_pred CEEEEECccHHHHHHHHHHHHc-CCC--cCeEEEEEccCCCc
Confidence 6899999999999999999998 810 02799999 87
No 444
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=90.36 E-value=0.25 Score=47.26 Aligned_cols=36 Identities=22% Similarity=0.197 Sum_probs=32.3
Q ss_pred CCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 42 ~~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
++|+|.|.|+ |.+|++++..|.+. | ++|++.+|+..
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVAS-G-----EEVTVLDDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT-T-----CCEEEECCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHC-C-----CEEEEEecCCc
Confidence 3579999998 99999999999999 8 89999999864
No 445
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=90.33 E-value=0.23 Score=50.08 Aligned_cols=33 Identities=18% Similarity=0.182 Sum_probs=30.2
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
++|+|||+|..|.+.|..|++. | ++|+++.++.
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~-G-----~~V~vlE~~~ 34 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNA-G-----KKVLLLEGGE 34 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHc-C-----CeEEEEecCC
Confidence 5899999999999999999999 8 8999998753
No 446
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=90.30 E-value=0.24 Score=51.80 Aligned_cols=36 Identities=22% Similarity=0.329 Sum_probs=32.4
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
..++|.|||+|..|.++|..|++. | .+|+++++.+.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~-G-----~~v~vlE~~~~ 46 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLG-G-----VDVMVLEQLPQ 46 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEECCCC
Confidence 346899999999999999999999 8 89999998754
No 447
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=90.30 E-value=0.18 Score=54.23 Aligned_cols=33 Identities=27% Similarity=0.415 Sum_probs=30.8
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
.+|+|||+|..|.+.|..|++. | .+|+++.+..
T Consensus 24 ~DVvIVGgG~AGl~aA~~Lar~-G-----~~V~LiEr~~ 56 (591)
T 3i3l_A 24 SKVAIIGGGPAGSVAGLTLHKL-G-----HDVTIYERSA 56 (591)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-----CEEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHcC-C-----CCEEEEcCCC
Confidence 6899999999999999999999 8 8999999873
No 448
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=90.29 E-value=0.23 Score=48.66 Aligned_cols=34 Identities=26% Similarity=0.351 Sum_probs=30.9
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecCc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRPG 82 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~-~V~l~~r~~ 82 (461)
.++|+|||+|..|.+.|..|++. | + +|++++++.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~-g-----~~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDF-G-----ITDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-T-----CCCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHc-C-----CCcEEEEecCC
Confidence 36899999999999999999998 8 7 899999875
No 449
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=90.28 E-value=1.4 Score=44.58 Aligned_cols=40 Identities=18% Similarity=0.224 Sum_probs=28.6
Q ss_pred CHHHHhcCCCEEEEcCCchhHHHHHHHHHHHhhccCCCC--EEEEEeec
Q 012547 153 NLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVP--VIISLAKG 199 (461)
Q Consensus 153 dl~~av~~aDiIIiaVps~~~~~vl~~i~~~l~~~~~~~--iIIs~tkG 199 (461)
|+++ +.++|+||.|+|.....+.+..+.. . +. +||+++.-
T Consensus 59 ~~~~-~~~~DvVf~a~g~~~s~~~a~~~~~---~---G~k~vVID~ss~ 100 (367)
T 1t4b_A 59 DLEA-LKALDIIVTCQGGDYTNEIYPKLRE---S---GWQGYWIDAASS 100 (367)
T ss_dssp CHHH-HHTCSEEEECSCHHHHHHHHHHHHH---T---TCCCEEEECSST
T ss_pred ChHH-hcCCCEEEECCCchhHHHHHHHHHH---C---CCCEEEEcCChh
Confidence 4544 5789999999998888777766543 2 33 78877643
No 450
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=90.26 E-value=0.29 Score=47.74 Aligned_cols=37 Identities=27% Similarity=0.196 Sum_probs=31.7
Q ss_pred CCCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 41 GDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 41 ~~~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
-.+|+|.|.|+ |.+|.+++..|.+. | ++|++.+|+..
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~ 62 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMD-G-----HEVTVVDNFFT 62 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEECCSS
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHC-C-----CEEEEEeCCCc
Confidence 34589999998 99999999999998 8 89999998753
No 451
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=90.18 E-value=0.14 Score=49.21 Aligned_cols=34 Identities=15% Similarity=0.052 Sum_probs=31.1
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
+.+|.|||+|.-|.+.|..|++. | ++|+++++++
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-g-----~~v~lie~~~ 40 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMR-Q-----ASVKIIESLP 40 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHC-C-----CCEEEEEcCC
Confidence 35899999999999999999998 8 8999999875
No 452
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=90.14 E-value=0.32 Score=46.28 Aligned_cols=38 Identities=16% Similarity=0.167 Sum_probs=32.5
Q ss_pred ceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012547 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (461)
Q Consensus 44 mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (461)
+++.|.|+ |.+|.++|..|++. | ++|.+.+|+.+.++.
T Consensus 31 k~vlVTGas~GIG~aia~~l~~~-G-----~~Vi~~~r~~~~~~~ 69 (281)
T 3ppi_A 31 ASAIVSGGAGGLGEATVRRLHAD-G-----LGVVIADLAAEKGKA 69 (281)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHC-C-----CEEEEEeCChHHHHH
Confidence 56888887 89999999999999 8 899999999876543
No 453
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=90.09 E-value=0.31 Score=46.34 Aligned_cols=37 Identities=19% Similarity=0.244 Sum_probs=32.2
Q ss_pred ceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012547 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (461)
Q Consensus 44 mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (461)
++|.|.|+ |.+|.+++..|++. | ++|.+.+|+.+..+
T Consensus 33 k~vlVTGasggIG~~la~~l~~~-G-----~~V~~~~r~~~~~~ 70 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQ-G-----LKVVGCARTVGNIE 70 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHC-C-----CEEEEEECChHHHH
Confidence 57889986 89999999999999 8 89999999876554
No 454
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=90.07 E-value=0.6 Score=48.19 Aligned_cols=35 Identities=11% Similarity=0.191 Sum_probs=31.7
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
.+||.|||.|..|.+.|..|.+. | ++|+++|++..
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~-G-----~~V~~~D~~~~ 43 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKL-G-----AIVTVNDGKPF 43 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHT-T-----CEEEEEESSCG
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-C-----CEEEEEeCCcc
Confidence 47999999999999999999999 8 99999998763
No 455
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=90.05 E-value=0.27 Score=52.14 Aligned_cols=53 Identities=23% Similarity=0.282 Sum_probs=40.5
Q ss_pred hhHHhhHHHHHhhcCCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 24 SLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
++.+-.+..++++.........|.|||+|..|.+.|..+++. | .+|.++.+..
T Consensus 107 ~l~~a~~~~~~~~~~~~~~~~DVvVVGaG~aGl~aA~~la~~-G-----~~V~vlEk~~ 159 (571)
T 1y0p_A 107 ELAKDKSERQAALASAPHDTVDVVVVGSGGAGFSAAISATDS-G-----AKVILIEKEP 159 (571)
T ss_dssp GGGGGHHHHHHHHHSCCSEECSEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred HHHHHHHHhhhhhccCCCCCCCEEEECCCHHHHHHHHHHHHC-C-----CcEEEEeCCC
Confidence 344445555566643333456899999999999999999999 8 8999998765
No 456
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=90.01 E-value=0.29 Score=51.41 Aligned_cols=34 Identities=24% Similarity=0.208 Sum_probs=30.9
Q ss_pred CceEEEECccHHHHHHHHHHHH---hcCCCCCCeeEEEEecCc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQD---SYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~---~~G~~~~~~~V~l~~r~~ 82 (461)
+.+|+|||+|..|.+.|..|++ . | .+|+++.+..
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~-G-----~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQ-Q-----ANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCS-S-----CEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCC-C-----CEEEEECCCC
Confidence 4689999999999999999999 8 7 8999999854
No 457
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=89.89 E-value=0.2 Score=52.59 Aligned_cols=38 Identities=13% Similarity=0.123 Sum_probs=32.4
Q ss_pred CCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 40 ~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
..++.||+|||+|.-|...|..|++. + ++|+|++++..
T Consensus 39 ~~~KprVVIIGgG~AGl~~A~~L~~~-~-----~~VtLId~~~~ 76 (502)
T 4g6h_A 39 HSDKPNVLILGSGWGAISFLKHIDTK-K-----YNVSIISPRSY 76 (502)
T ss_dssp SCSSCEEEEECSSHHHHHHHHHSCTT-T-----CEEEEEESSSE
T ss_pred CCCCCCEEEECCcHHHHHHHHHhhhC-C-----CcEEEECCCCC
Confidence 33457999999999999999999877 6 89999998753
No 458
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=89.78 E-value=0.42 Score=46.20 Aligned_cols=60 Identities=13% Similarity=0.073 Sum_probs=33.6
Q ss_pred ccccchhHHhhHHHHHhhcCCCCCCceEEEECcc---HHHHHHHHHHHHhcCCCCCCeeEEEEecCchh
Q 012547 19 HHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAG---AWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (461)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaG---amG~alA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (461)
||.-+.+|+...-=..+..|..-..+++.|.|++ .+|.++|..|++. | .+|.+.+|+++.
T Consensus 6 ~~~~~~~~~~~~gp~sm~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~-G-----~~V~~~~r~~~~ 68 (296)
T 3k31_A 6 HHHMGTLEAQTQGPGSMRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQ-G-----AEVALTYLSETF 68 (296)
T ss_dssp ---------------CCCCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHT-T-----CEEEEEESSGGG
T ss_pred ccccccceecccCCccccchhccCCCEEEEEeCCCCCCHHHHHHHHHHHC-C-----CEEEEEeCChHH
Confidence 3444555554433222222222233578899985 8999999999999 8 899999999754
No 459
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=89.78 E-value=0.51 Score=44.75 Aligned_cols=38 Identities=11% Similarity=0.150 Sum_probs=32.8
Q ss_pred CceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012547 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (461)
Q Consensus 43 ~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (461)
.++|.|.|+ |.+|.++|..|++. | ++|.+.+|+++..+
T Consensus 31 ~k~vlITGasggIG~~la~~L~~~-G-----~~V~~~~r~~~~~~ 69 (272)
T 1yb1_A 31 GEIVLITGAGHGIGRLTAYEFAKL-K-----SKLVLWDINKHGLE 69 (272)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHC-C-----CEEEEEEcCHHHHH
Confidence 367999986 89999999999999 8 89999999876544
No 460
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=89.74 E-value=0.24 Score=52.93 Aligned_cols=34 Identities=24% Similarity=0.316 Sum_probs=30.6
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
..|.|||+|..|.++|..|++. | .+|.++++...
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~-G-----~~V~VlEr~~~ 83 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAG-G-----VGALVLEKLVE 83 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHT-T-----CCEEEEBSCSS
T ss_pred CCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEcCCCC
Confidence 4699999999999999999999 8 89999998754
No 461
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=89.66 E-value=0.16 Score=49.09 Aligned_cols=32 Identities=13% Similarity=0.128 Sum_probs=29.6
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEec
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRR 80 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r 80 (461)
.++|+|||+|..|.+.|..|++. | ++|+++++
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~-g-----~~v~lie~ 39 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARA-E-----LKPLLFEG 39 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-T-----CCCEEECC
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-C-----CeEEEEec
Confidence 36899999999999999999998 8 89999987
No 462
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=89.64 E-value=0.27 Score=47.47 Aligned_cols=34 Identities=24% Similarity=0.302 Sum_probs=31.0
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
.+|+|||+|..|.+.|..|++. | ++|+++++++.
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~-g-----~~v~vie~~~~ 37 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRS-G-----LSYVILDAEAS 37 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHS-S-----CCEEEECCSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEECCCC
Confidence 5799999999999999999999 8 89999998753
No 463
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=89.45 E-value=0.57 Score=48.52 Aligned_cols=36 Identities=25% Similarity=0.335 Sum_probs=32.2
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
..++|+|||+|.-|.+.|..|++. | ++|+++++...
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~-G-----~~V~v~e~~~~ 156 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK-G-----YEVHVYDRYDR 156 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-T-----CCEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-C-----CeEEEEeccCC
Confidence 347899999999999999999999 8 89999998753
No 464
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=89.45 E-value=0.34 Score=51.32 Aligned_cols=42 Identities=10% Similarity=0.011 Sum_probs=36.4
Q ss_pred CCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012547 40 EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (461)
Q Consensus 40 ~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (461)
+...++|.|+|+|.+|..++..|.+. | ++|.+++.+++.++.
T Consensus 124 ~~~~~hviI~G~g~~g~~la~~L~~~-~-----~~vvvid~~~~~~~~ 165 (565)
T 4gx0_A 124 DDTRGHILIFGIDPITRTLIRKLESR-N-----HLFVVVTDNYDQALH 165 (565)
T ss_dssp TTCCSCEEEESCCHHHHHHHHHTTTT-T-----CCEEEEESCHHHHHH
T ss_pred cccCCeEEEECCChHHHHHHHHHHHC-C-----CCEEEEECCHHHHHH
Confidence 44457899999999999999999988 7 899999999876654
No 465
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=89.40 E-value=0.55 Score=44.29 Aligned_cols=43 Identities=14% Similarity=0.193 Sum_probs=35.0
Q ss_pred CCCCCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012547 39 AEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (461)
Q Consensus 39 ~~~~~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (461)
.+-..+++.|.|+ |.+|.++|..|++. | ++|.+.+|+++.++.
T Consensus 4 ~~l~gk~~lVTGas~gIG~a~a~~l~~~-G-----~~V~~~~r~~~~~~~ 47 (255)
T 4eso_A 4 GNYQGKKAIVIGGTHGMGLATVRRLVEG-G-----AEVLLTGRNESNIAR 47 (255)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHH
Confidence 3333467889986 88999999999999 8 899999999876553
No 466
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=89.39 E-value=0.36 Score=46.19 Aligned_cols=35 Identities=26% Similarity=0.325 Sum_probs=32.0
Q ss_pred ceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchh
Q 012547 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (461)
Q Consensus 44 mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (461)
|||.|.|+ |.+|++++..|++. | ++|++.+|+.+.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~~ 36 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVEL-G-----YEVVVVDNLSSG 36 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEECCCSSC
T ss_pred CEEEEECCCChHHHHHHHHHHhC-C-----CEEEEEeCCCCC
Confidence 78999998 99999999999999 8 999999998654
No 467
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=89.39 E-value=0.52 Score=43.21 Aligned_cols=39 Identities=21% Similarity=0.291 Sum_probs=31.9
Q ss_pred CceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhh
Q 012547 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSV 85 (461)
Q Consensus 43 ~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~ 85 (461)
+|+|.|.|+ |.+|.+++..|++. | ++++|++.+|+++..
T Consensus 4 ~~~ilVtGasG~iG~~l~~~l~~~-~---~g~~V~~~~r~~~~~ 43 (253)
T 1xq6_A 4 LPTVLVTGASGRTGQIVYKKLKEG-S---DKFVAKGLVRSAQGK 43 (253)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT-T---TTCEEEEEESCHHHH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhc-C---CCcEEEEEEcCCCch
Confidence 578999995 99999999999987 3 018999999987543
No 468
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=89.36 E-value=0.32 Score=49.19 Aligned_cols=35 Identities=26% Similarity=0.330 Sum_probs=30.7
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCee--EEEEecCc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVL--IRIWRRPG 82 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~--V~l~~r~~ 82 (461)
.+++|+|||+|.-|.+.|..|++. | ++ |+++++.+
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~-g-----~~~~V~lie~~~ 44 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQN-G-----FEGRVLVIGREP 44 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-T-----CCSCEEEEESSS
T ss_pred CCCcEEEECChHHHHHHHHHHHcc-C-----cCCCEEEEecCC
Confidence 346899999999999999999998 7 55 99998865
No 469
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=89.33 E-value=0.39 Score=43.05 Aligned_cols=35 Identities=23% Similarity=0.343 Sum_probs=30.9
Q ss_pred CCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 42 DPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 42 ~~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
++|||.|.|+ |.+|.+++..|+ . | ++|.+.+|+++
T Consensus 2 ~kM~vlVtGasg~iG~~~~~~l~-~-g-----~~V~~~~r~~~ 37 (202)
T 3d7l_A 2 NAMKILLIGASGTLGSAVKERLE-K-K-----AEVITAGRHSG 37 (202)
T ss_dssp CSCEEEEETTTSHHHHHHHHHHT-T-T-----SEEEEEESSSS
T ss_pred CCcEEEEEcCCcHHHHHHHHHHH-C-C-----CeEEEEecCcc
Confidence 4579999996 899999999999 8 8 99999999863
No 470
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=89.31 E-value=0.39 Score=46.48 Aligned_cols=61 Identities=15% Similarity=0.234 Sum_probs=33.5
Q ss_pred cCcccccccchhHHhhHHHHHhhcCCCCCCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012547 14 SNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (461)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (461)
|.---||..|.+....+ +|.+ ..+++.|.|+ |.+|.++|..|++. | ++|.+.+|+++.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~----m~~l---~~k~vlVTGas~gIG~aia~~L~~~-G-----~~V~~~~r~~~~~~~ 65 (297)
T 1xhl_A 4 SHHHHHHSSGLVPRGSH----MARF---SGKSVIITGSSNGIGRSAAVIFAKE-G-----AQVTITGRNEDRLEE 65 (297)
T ss_dssp -----------------------CC---TTCEEEETTCSSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHHH
T ss_pred ccccccccCCccccccc----ccCC---CCCEEEEeCCCcHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHHH
Confidence 33344666666654433 3322 2356888886 89999999999999 8 899999999865543
No 471
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=89.21 E-value=0.26 Score=50.41 Aligned_cols=39 Identities=15% Similarity=0.212 Sum_probs=30.7
Q ss_pred CCCCCCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 38 KAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 38 ~~~~~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
|+-...++|+|||+|.-|.+.|..|++. | ++|+++.++.
T Consensus 11 ~~~~~~~~v~iiG~G~~Gl~aa~~l~~~-g-----~~v~v~E~~~ 49 (478)
T 2ivd_A 11 MPRTTGMNVAVVGGGISGLAVAHHLRSR-G-----TDAVLLESSA 49 (478)
T ss_dssp ------CCEEEECCBHHHHHHHHHHHTT-T-----CCEEEECSSS
T ss_pred CCCCCCCcEEEECCCHHHHHHHHHHHHC-C-----CCEEEEEcCC
Confidence 3444557899999999999999999999 8 8999998775
No 472
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=89.21 E-value=0.19 Score=52.80 Aligned_cols=34 Identities=18% Similarity=0.315 Sum_probs=31.3
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
...|.|||+|..|.+.|..|+++ | ++|.++.++.
T Consensus 20 ~~dv~iiG~G~~g~~~a~~l~~~-g-----~~v~~~e~~~ 53 (475)
T 3p1w_A 20 HYDVIILGTGLKECILSGLLSHY-G-----KKILVLDRNP 53 (475)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-C-----CcEEEEeccC
Confidence 35799999999999999999999 8 8999999875
No 473
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=89.19 E-value=5.6 Score=39.02 Aligned_cols=119 Identities=18% Similarity=0.190 Sum_probs=74.2
Q ss_pred CCeEEecCHHHHhcCCCEEEEcCCch-hHHHHHHHHHHHhhccCCCCEEEEEeecCccccccccccCCHHHHHHhHhCCC
Q 012547 146 CPLKVVTNLQEAVWDADIVINGLPST-ETKEVFEEISRYWKERITVPVIISLAKGVEAELEAVPRIITPTQMINRATGVP 224 (461)
Q Consensus 146 ~~i~~t~dl~~av~~aDiIIiaVps~-~~~~vl~~i~~~l~~~~~~~iIIs~tkGi~~~~~~~~~~~~~se~i~~~lg~~ 224 (461)
.++++++|-.||++++|++|+.+|-- ...++++++.+++++ +++|. -+=.+++. .+...+++ +++.
T Consensus 127 aGVkVtsDD~EAvk~AEi~IlftPfG~~t~~Iakkii~~lpE---gAII~-nTCTipp~--------~ly~~le~-l~R~ 193 (358)
T 2b0j_A 127 VGLKVTSDDREAVEGADIVITWLPKGNKQPDIIKKFADAIPE---GAIVT-HACTIPTT--------KFAKIFKD-LGRE 193 (358)
T ss_dssp GTCEEESCHHHHHTTCSEEEECCTTCTTHHHHHHHHGGGSCT---TCEEE-ECSSSCHH--------HHHHHHHH-TTCT
T ss_pred cCcEeecchHHHhcCCCEEEEecCCCCCcHHHHHHHHhhCcC---CCEEe-cccCCCHH--------HHHHHHHH-hCcc
Confidence 37899999999999999999999964 588999999999998 66443 33244432 12333443 5532
Q ss_pred CCcEEEEeC-cchhHhhhccCceEEEEeCChhHHHHHHHHhcCCCceEEe-cCChHHH
Q 012547 225 IENILYLGG-PNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWD-NGDLVTH 280 (461)
Q Consensus 225 ~~~v~vlsG-Pn~a~ev~~g~~~~~~~~~~~~~~~~l~~ll~~~g~~v~~-s~Di~gv 280 (461)
.+.+.|. |.-.-+ ..|+.....--.+++..+++.++-.+.+-..|. ..|+.+.
T Consensus 194 --DvgIsS~HPaaVPg-t~Gq~~~g~~yAtEEqIeklveLaksa~k~ay~vPAdl~Sp 248 (358)
T 2b0j_A 194 --DLNITSYHPGCVPE-MKGQVYIAEGYASEEAVNKLYEIGKIARGKAFKMPANLIGP 248 (358)
T ss_dssp --TSEEEECBCSSCTT-TCCCEEEEESSSCHHHHHHHHHHHHHHHSCEEEEEHHHHHH
T ss_pred --cCCeeccCCCCCCC-CCCccccccccCCHHHHHHHHHHHHHhCCCeEecchhhccc
Confidence 2444443 332221 245432222123577788888888776666554 4566653
No 474
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=89.17 E-value=0.32 Score=47.39 Aligned_cols=37 Identities=22% Similarity=0.258 Sum_probs=30.9
Q ss_pred CCCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 41 GDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 41 ~~~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
.+.|+|.|.|+ |.+|++++..|.+. | ++|++++|+.+
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~-G-----~~V~~~~r~~~ 54 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQ-G-----RTVRGFDLRPS 54 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHT-T-----CCEEEEESSCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhC-C-----CEEEEEeCCCC
Confidence 34578999998 99999999999999 8 99999999864
No 475
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=89.16 E-value=0.19 Score=52.26 Aligned_cols=62 Identities=19% Similarity=0.228 Sum_probs=34.1
Q ss_pred ccccchhHHhhH-HHHHhh--cCCCCC-CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 19 HHTNGSLEERLD-ELRRLM--GKAEGD-PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 19 ~~~~~~~~~~~~-~~~~~~--~~~~~~-~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
||..|+-+-+.- .+||.+ .|.... .++|.|||+|.-|.+.|..|++. |. ++.+|++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~m~~~~m~~dvvIIGaG~aGl~aA~~l~~~-g~--~~~~V~lie~~~~ 72 (490)
T 2bc0_A 7 HHHHGMASMTGGQQMGRTLYDDDDKDRWGSKIVVVGANHAGTACIKTMLTN-YG--DANEIVVFDQNSN 72 (490)
T ss_dssp -----------CCCCSCCTTCCCCTTCCCCEEEEECCSHHHHHHHHHHHHH-HG--GGSEEEEECSSSC
T ss_pred ccccccccccchhhhccccccccchhccCCcEEEECCCHHHHHHHHHHHhc-CC--CCCeEEEEECCCC
Confidence 566677665542 233332 122222 26899999999999999999986 30 0168999998763
No 476
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=89.12 E-value=0.24 Score=46.78 Aligned_cols=37 Identities=22% Similarity=0.200 Sum_probs=30.8
Q ss_pred ceEEEECc-cHHHHHHHHHHHHhc-CCCCCCeeEEEEecCchhh
Q 012547 44 LRIVGVGA-GAWGSVFTAMLQDSY-GYLRDKVLIRIWRRPGRSV 85 (461)
Q Consensus 44 mkI~IIGa-GamG~alA~~La~~~-G~~~~~~~V~l~~r~~~~~ 85 (461)
|+|.|.|+ |.+|++++..|.+.. | ++|++.+|+.+..
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g-----~~V~~~~r~~~~~ 39 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPA-----SQIIAIVRNVEKA 39 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCG-----GGEEEEESCTTTT
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCC-----CeEEEEEcCHHHH
Confidence 57999997 999999999998641 3 8999999987544
No 477
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=88.94 E-value=0.25 Score=48.42 Aligned_cols=33 Identities=18% Similarity=0.177 Sum_probs=29.8
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
.++|+|||+|..|.+.|..|+ . | .+|++++++.
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~-G-----~~V~vlE~~~ 41 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-A-H-----GRVVVLEREA 41 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-T-T-----SCEEEECSSS
T ss_pred cCCEEEECCcHHHHHHHHHHh-C-C-----CCEEEEECCC
Confidence 367999999999999999999 7 7 8999999874
No 478
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=88.91 E-value=0.38 Score=48.87 Aligned_cols=34 Identities=18% Similarity=0.212 Sum_probs=30.8
Q ss_pred ceEEEECccHHHHHHHHHHHH--hcCCCCCCeeEEEEecCch
Q 012547 44 LRIVGVGAGAWGSVFTAMLQD--SYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~--~~G~~~~~~~V~l~~r~~~ 83 (461)
++|.|||+|..|.+.|..|++ . | ++|+++++++.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~-g-----~~Vtlie~~~~ 38 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMP-D-----LKITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCT-T-----CEEEEECSSSE
T ss_pred CCEEEECccHHHHHHHHHHHcCCC-C-----CeEEEECCCCC
Confidence 589999999999999999999 5 5 89999998764
No 479
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=88.91 E-value=0.34 Score=46.23 Aligned_cols=32 Identities=16% Similarity=0.212 Sum_probs=29.6
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCe-eEEEEecC
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKV-LIRIWRRP 81 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~-~V~l~~r~ 81 (461)
++|+|||+|.-|.+.|..|++. | + +|.+++++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~-g-----~~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRG-G-----VKNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-T-----CSSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHHC-C-----CCcEEEEcCC
Confidence 5899999999999999999998 8 8 99999875
No 480
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=88.84 E-value=0.34 Score=50.08 Aligned_cols=34 Identities=24% Similarity=0.326 Sum_probs=30.6
Q ss_pred ceEEEECccHHHHHHHHHHHH---hcCCCCCCee---EEEEecCch
Q 012547 44 LRIVGVGAGAWGSVFTAMLQD---SYGYLRDKVL---IRIWRRPGR 83 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~---~~G~~~~~~~---V~l~~r~~~ 83 (461)
++|+|||+|.-|.+.|..|++ . | .+ |++++++..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~-G-----~~~~~V~v~E~~~~ 42 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEK-G-----AEIPELVCFEKQAD 42 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHT-T-----CCCCEEEEECSSSS
T ss_pred CcEEEECccHHHHHHHHHHHhhhhc-C-----CCCCcEEEEEcCCC
Confidence 689999999999999999999 8 7 77 999998753
No 481
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=88.69 E-value=0.82 Score=46.35 Aligned_cols=34 Identities=35% Similarity=0.422 Sum_probs=31.3
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~ 81 (461)
..++|+|||+|.-|.+.|..|++. | ++|+++.++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~-G-----~~V~VlE~~ 76 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRA-G-----HDVTILEAN 76 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHT-S-----CEEEEECSC
T ss_pred CCceEEEECCCHHHHHHHHHHHHC-C-----CcEEEEecc
Confidence 457999999999999999999999 8 899999877
No 482
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=88.61 E-value=0.42 Score=47.65 Aligned_cols=35 Identities=29% Similarity=0.423 Sum_probs=30.6
Q ss_pred ceEEEECccHHHHHHHHHHHHhc-CCCCCCeeEEEEecCch
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSY-GYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~-G~~~~~~~V~l~~r~~~ 83 (461)
|+|.|||+|..|.++|..|++.. | .+|+++.+++.
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G-----~~V~v~E~~~~ 36 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPL-----WAIDIVEKNDE 36 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTT-----SEEEEECSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCC-----CCEEEEECCCC
Confidence 58999999999999999999862 4 89999998764
No 483
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=88.49 E-value=0.63 Score=45.44 Aligned_cols=37 Identities=14% Similarity=0.197 Sum_probs=26.9
Q ss_pred CCCCceEEEECccHH-HHHHHHHHHHhcCCCCCCeeEEEEec
Q 012547 40 EGDPLRIVGVGAGAW-GSVFTAMLQDSYGYLRDKVLIRIWRR 80 (461)
Q Consensus 40 ~~~~mkI~IIGaGam-G~alA~~La~~~G~~~~~~~V~l~~r 80 (461)
+....+++|||+|.+ |..+|..|... |. +..|++..+
T Consensus 155 ~l~gk~vvVvG~s~iVG~p~A~lL~~~-g~---~atVtv~h~ 192 (281)
T 2c2x_A 155 SIAGAHVVVIGRGVTVGRPLGLLLTRR-SE---NATVTLCHT 192 (281)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHTST-TT---CCEEEEECT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHhcC-CC---CCEEEEEEC
Confidence 334579999999975 99999998765 20 167887743
No 484
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=88.49 E-value=0.27 Score=51.38 Aligned_cols=33 Identities=18% Similarity=0.409 Sum_probs=30.8
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
.+|+|||+|..|.+.|..|++. | ++|+++.+..
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~-G-----~~V~liE~~~ 40 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMR-G-----HRVLLLEREA 40 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTT-T-----CCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhC-C-----CCEEEEccCC
Confidence 5899999999999999999998 8 8999999875
No 485
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=88.39 E-value=0.61 Score=43.44 Aligned_cols=38 Identities=13% Similarity=0.080 Sum_probs=32.7
Q ss_pred CceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012547 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (461)
Q Consensus 43 ~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (461)
.++|.|.|+ |.+|.+++..|++. | ++|.+.+|+.+..+
T Consensus 13 ~k~vlItGasggiG~~la~~l~~~-G-----~~V~~~~r~~~~~~ 51 (260)
T 3awd_A 13 NRVAIVTGGAQNIGLACVTALAEA-G-----ARVIIADLDEAMAT 51 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC-C-----CEEEEEeCCHHHHH
Confidence 357899986 99999999999999 8 89999999876544
No 486
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=88.37 E-value=0.55 Score=44.20 Aligned_cols=40 Identities=18% Similarity=0.087 Sum_probs=34.0
Q ss_pred CCceEEEECc-c-HHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012547 42 DPLRIVGVGA-G-AWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (461)
Q Consensus 42 ~~mkI~IIGa-G-amG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (461)
..+++.|.|+ | .+|.++|..|++. | ++|.+.+|+.+..+.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~-G-----~~V~~~~r~~~~~~~ 62 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLE-G-----ADVVISDYHERRLGE 62 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHT-T-----CEEEEEESCHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHC-C-----CEEEEecCCHHHHHH
Confidence 3467999998 8 5999999999999 8 899999999876543
No 487
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=88.28 E-value=0.46 Score=44.09 Aligned_cols=33 Identities=24% Similarity=0.308 Sum_probs=30.3
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
.+|.|||+|..|...|..|++. | .+|+++.+..
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~-g-----~~v~lie~~~ 36 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQK-G-----VRVGLLTQSL 36 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESCG
T ss_pred CCEEEECcCHHHHHHHHHHHHC-C-----CCEEEEecCC
Confidence 4799999999999999999999 8 8999999873
No 488
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=88.27 E-value=0.46 Score=48.73 Aligned_cols=35 Identities=23% Similarity=0.262 Sum_probs=32.0
Q ss_pred CCceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 42 DPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 42 ~~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
.+++|.|||+|.-|.+.|..|++. | ++|+++++++
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~-g-----~~V~liE~~~ 39 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQL-G-----FKTTCIEKRG 39 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-T-----CCEEEEECSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHC-C-----CeEEEEeCCC
Confidence 457899999999999999999999 8 8999999885
No 489
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=88.22 E-value=0.71 Score=44.66 Aligned_cols=39 Identities=10% Similarity=0.096 Sum_probs=33.7
Q ss_pred CceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012547 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (461)
Q Consensus 43 ~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (461)
.++|.|.|+ |.+|.++|..|++. | ++|.+.+|+.+.++.
T Consensus 31 gk~vlVTGas~gIG~~la~~l~~~-G-----~~V~~~~r~~~~~~~ 70 (301)
T 3tjr_A 31 GRAAVVTGGASGIGLATATEFARR-G-----ARLVLSDVDQPALEQ 70 (301)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC-C-----CEEEEEECCHHHHHH
Confidence 357999997 88999999999999 8 899999999876553
No 490
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=88.15 E-value=0.43 Score=49.43 Aligned_cols=33 Identities=15% Similarity=0.313 Sum_probs=30.1
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
.+|+|||+|.-|.+.|..|++. | ++|.+++++.
T Consensus 26 ~dVvVIGgG~aGl~aA~~la~~-G-----~~V~liEk~~ 58 (491)
T 3urh_A 26 YDLIVIGSGPGGYVCAIKAAQL-G-----MKVAVVEKRS 58 (491)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-C-----CeEEEEecCC
Confidence 4699999999999999999999 8 8999999754
No 491
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=88.11 E-value=0.41 Score=50.17 Aligned_cols=35 Identities=26% Similarity=0.322 Sum_probs=31.9
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
..+|.|||+|..|.++|..|++. | .+|++++++..
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~-G-----~~v~viEr~~~ 39 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQ-G-----VRVLVVERRPG 39 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTT-T-----CCEEEECSSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHC-C-----CCEEEEeCCCC
Confidence 46899999999999999999999 8 89999998764
No 492
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=88.09 E-value=0.45 Score=46.68 Aligned_cols=34 Identities=15% Similarity=0.058 Sum_probs=30.8
Q ss_pred CceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
.++|+|||+|..|.+.|..|++. | ++|+++++..
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~-g-----~~v~lie~~~ 47 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMN-N-----ISCRIIESMP 47 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-T-----CCEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-C-----CCEEEEecCC
Confidence 36899999999999999999998 8 8999999865
No 493
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=88.08 E-value=0.41 Score=52.10 Aligned_cols=33 Identities=18% Similarity=0.305 Sum_probs=30.6
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecCc
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPG 82 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~~ 82 (461)
..|+|||+|..|.+.|..|++. | .+|++++++.
T Consensus 265 ~DVvIIGgGiaGlsaA~~La~~-G-----~~V~vlEk~~ 297 (689)
T 3pvc_A 265 DDIAIIGGGIVSALTALALQRR-G-----AVVTLYCADA 297 (689)
T ss_dssp SSEEEECCSHHHHHHHHHHHTT-T-----CCEEEEESSS
T ss_pred CCEEEECCcHHHHHHHHHHHHC-C-----CcEEEEeCCC
Confidence 6899999999999999999999 8 8999999863
No 494
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=87.89 E-value=0.56 Score=44.75 Aligned_cols=37 Identities=16% Similarity=0.171 Sum_probs=32.1
Q ss_pred ceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012547 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (461)
Q Consensus 44 mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (461)
++|.|.|+ |.+|.++|..|++. | ++|.+.+|+++.++
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~~-G-----~~V~~~~r~~~~~~ 60 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGKE-G-----LRVFVCARGEEGLR 60 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHT-T-----CEEEEEESCHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-C-----CEEEEEeCCHHHHH
Confidence 57888886 89999999999999 8 89999999976554
No 495
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=87.85 E-value=0.44 Score=48.62 Aligned_cols=35 Identities=20% Similarity=0.238 Sum_probs=31.4
Q ss_pred CceEEEECccHHHHHHHHHHHH---hcCCCCCCeeEEEEecCch
Q 012547 43 PLRIVGVGAGAWGSVFTAMLQD---SYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 43 ~mkI~IIGaGamG~alA~~La~---~~G~~~~~~~V~l~~r~~~ 83 (461)
+++|+|||+|..|.+.|..|++ . | ++|+++++++.
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~-g-----~~Vtlie~~~~ 41 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGS-G-----HEVTLISANDY 41 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGG-G-----SEEEEECSSSE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCC-c-----CEEEEEeCCCC
Confidence 4689999999999999999998 6 6 89999998864
No 496
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=87.82 E-value=0.49 Score=45.44 Aligned_cols=32 Identities=31% Similarity=0.377 Sum_probs=29.7
Q ss_pred ceEEEECccHHHHHHHHHHHHhcCCCCCCeeEEEEecC
Q 012547 44 LRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRP 81 (461)
Q Consensus 44 mkI~IIGaGamG~alA~~La~~~G~~~~~~~V~l~~r~ 81 (461)
.+|+|||+|.-|.+.|..|++. | ++|++++++
T Consensus 17 ~dvvIIG~G~aGl~aA~~l~~~-g-----~~v~lie~~ 48 (319)
T 3cty_A 17 FDVVIVGAGAAGFSAAVYAARS-G-----FSVAILDKA 48 (319)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-T-----CCEEEEESS
T ss_pred CcEEEECcCHHHHHHHHHHHhC-C-----CcEEEEeCC
Confidence 5799999999999999999999 8 899999874
No 497
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=87.80 E-value=0.48 Score=45.28 Aligned_cols=37 Identities=16% Similarity=0.208 Sum_probs=32.1
Q ss_pred ceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhh
Q 012547 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVD 86 (461)
Q Consensus 44 mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~ 86 (461)
++|.|.|+ |.+|.++|..|++. | ++|.+.+|+++.++
T Consensus 30 k~vlVTGas~gIG~aia~~L~~~-G-----~~V~~~~r~~~~~~ 67 (276)
T 2b4q_A 30 RIALVTGGSRGIGQMIAQGLLEA-G-----ARVFICARDAEACA 67 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEECSCHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHC-C-----CEEEEEeCCHHHHH
Confidence 57888986 89999999999999 8 89999999876544
No 498
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=87.78 E-value=0.52 Score=43.42 Aligned_cols=35 Identities=17% Similarity=0.183 Sum_probs=31.4
Q ss_pred ceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchh
Q 012547 44 LRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRS 84 (461)
Q Consensus 44 mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~ 84 (461)
++|.|.|+ |.+|.+++..|++. | ++|.+.+|+.+.
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~-g-----~~V~~~~r~~~~ 37 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARA-G-----HTVIGIDRGQAD 37 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEESSSSS
T ss_pred cEEEEeCCCcHHHHHHHHHHHhC-C-----CEEEEEeCChhH
Confidence 47999997 99999999999999 8 899999998754
No 499
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=87.71 E-value=0.56 Score=45.22 Aligned_cols=35 Identities=23% Similarity=0.191 Sum_probs=30.8
Q ss_pred CceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCch
Q 012547 43 PLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGR 83 (461)
Q Consensus 43 ~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~ 83 (461)
||+|.|.|+ |.+|++++..|++. | ++|++.+|+..
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~-g-----~~V~~~~r~~~ 36 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDE-G-----LSVVVVDNLQT 36 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT-T-----CEEEEEECCSS
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC-C-----CEEEEEeCCCc
Confidence 479999986 99999999999998 8 99999998753
No 500
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=87.66 E-value=0.76 Score=44.98 Aligned_cols=44 Identities=16% Similarity=0.108 Sum_probs=35.8
Q ss_pred CCCCCCceEEEECc-cHHHHHHHHHHHHhcCCCCCCeeEEEEecCchhhhh
Q 012547 38 KAEGDPLRIVGVGA-GAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDR 87 (461)
Q Consensus 38 ~~~~~~mkI~IIGa-GamG~alA~~La~~~G~~~~~~~V~l~~r~~~~~~~ 87 (461)
|.+-..++|.|.|+ |.+|.++|..|++. | ++|.+.+|+.+.++.
T Consensus 3 m~~l~~k~vlVTGas~gIG~~la~~l~~~-G-----~~Vv~~~r~~~~~~~ 47 (319)
T 3ioy_A 3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQ-G-----CKVAIADIRQDSIDK 47 (319)
T ss_dssp CCCCTTCEEEEETTTSTHHHHHHHHHHHT-T-----CEEEEEESCHHHHHH
T ss_pred ccCCCCCEEEEcCCchHHHHHHHHHHHHC-C-----CEEEEEECCHHHHHH
Confidence 33333457999997 89999999999999 8 899999999876654
Done!