Query 012553
Match_columns 461
No_of_seqs 250 out of 1305
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 11:41:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012553.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012553hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gq2_A Malic enzyme; oxidoredu 100.0 1E-160 4E-165 1264.8 34.2 405 50-456 1-405 (555)
2 1pj3_A NAD-dependent malic enz 100.0 3E-160 9E-165 1265.2 32.7 406 50-456 3-410 (564)
3 1o0s_A NAD-ME, NAD-dependent m 100.0 9E-160 3E-164 1264.9 31.1 409 46-456 33-443 (605)
4 3nv9_A Malic enzyme; rossmann 100.0 5.4E-89 1.8E-93 709.1 19.6 266 132-455 58-334 (487)
5 2a9f_A Putative malic enzyme ( 100.0 5.2E-83 1.8E-87 655.9 11.9 267 121-455 23-296 (398)
6 1vl6_A Malate oxidoreductase; 100.0 1.6E-79 5.4E-84 628.9 13.3 267 121-455 27-301 (388)
7 2dvm_A Malic enzyme, 439AA lon 100.0 3.5E-58 1.2E-62 477.9 16.6 263 122-449 22-299 (439)
8 3gvp_A Adenosylhomocysteinase 98.8 3.4E-08 1.2E-12 103.0 14.6 161 253-450 112-311 (435)
9 3h9u_A Adenosylhomocysteinase; 98.7 8.3E-08 2.8E-12 100.2 11.6 121 298-450 171-302 (436)
10 1x13_A NAD(P) transhydrogenase 98.6 6E-08 2.1E-12 99.3 7.9 218 167-449 27-295 (401)
11 3ond_A Adenosylhomocysteinase; 97.9 1.8E-05 6.3E-10 83.6 9.2 120 298-448 225-354 (488)
12 1l7d_A Nicotinamide nucleotide 97.7 0.00045 1.5E-08 69.8 14.7 228 167-448 20-296 (384)
13 3n58_A Adenosylhomocysteinase; 97.5 0.00051 1.8E-08 72.3 11.4 120 298-449 207-337 (464)
14 4dio_A NAD(P) transhydrogenase 97.5 0.00011 3.8E-09 76.1 5.9 103 328-447 187-313 (405)
15 3p2y_A Alanine dehydrogenase/p 97.1 0.00043 1.5E-08 71.2 6.1 104 329-449 182-305 (381)
16 1a4i_A Methylenetetrahydrofola 96.7 0.0036 1.2E-07 62.6 7.8 97 309-449 143-240 (301)
17 3l07_A Bifunctional protein fo 96.6 0.0048 1.6E-07 61.2 8.2 92 311-446 141-233 (285)
18 3k92_A NAD-GDH, NAD-specific g 96.5 0.047 1.6E-06 56.9 15.2 176 253-447 126-326 (424)
19 3d4o_A Dipicolinate synthase s 96.4 0.023 7.7E-07 55.0 11.8 116 309-450 133-249 (293)
20 4fcc_A Glutamate dehydrogenase 96.4 0.17 5.7E-06 53.2 18.9 183 253-450 141-355 (450)
21 3p2o_A Bifunctional protein fo 96.4 0.0077 2.6E-07 59.8 8.3 93 310-446 139-232 (285)
22 3ngx_A Bifunctional protein fo 96.3 0.0077 2.6E-07 59.6 7.7 92 309-446 130-222 (276)
23 1b0a_A Protein (fold bifunctio 96.2 0.0074 2.5E-07 60.0 7.1 97 309-449 137-234 (288)
24 3pwz_A Shikimate dehydrogenase 96.2 0.0096 3.3E-07 58.0 7.8 157 262-448 44-218 (272)
25 4a5o_A Bifunctional protein fo 96.2 0.011 3.6E-07 58.8 8.0 92 311-446 141-233 (286)
26 3aoe_E Glutamate dehydrogenase 96.1 0.066 2.3E-06 55.7 14.0 174 254-447 124-320 (419)
27 4a26_A Putative C-1-tetrahydro 96.1 0.011 3.9E-07 59.0 7.5 95 308-446 142-239 (300)
28 3jyo_A Quinate/shikimate dehyd 96.0 0.011 3.9E-07 57.7 7.3 137 262-422 51-205 (283)
29 1edz_A 5,10-methylenetetrahydr 96.0 0.021 7.2E-07 57.4 9.2 115 313-451 150-280 (320)
30 2yfq_A Padgh, NAD-GDH, NAD-spe 95.9 0.081 2.8E-06 55.0 13.5 178 254-450 117-327 (421)
31 3aog_A Glutamate dehydrogenase 95.8 0.17 5.9E-06 52.9 15.5 174 254-447 141-341 (440)
32 3r3j_A Glutamate dehydrogenase 95.8 0.27 9.2E-06 51.7 16.6 178 254-447 146-356 (456)
33 3oj0_A Glutr, glutamyl-tRNA re 95.7 0.0036 1.2E-07 53.8 2.1 112 309-452 4-116 (144)
34 3don_A Shikimate dehydrogenase 95.7 0.013 4.5E-07 57.3 6.1 111 315-449 101-214 (277)
35 1gpj_A Glutamyl-tRNA reductase 95.6 0.08 2.7E-06 53.8 11.7 141 286-451 127-271 (404)
36 2c2x_A Methylenetetrahydrofola 95.5 0.024 8.3E-07 56.1 7.3 99 309-449 136-235 (281)
37 1pzg_A LDH, lactate dehydrogen 95.3 0.022 7.5E-07 56.6 6.4 112 332-458 10-143 (331)
38 3tnl_A Shikimate dehydrogenase 95.2 0.025 8.5E-07 56.4 6.2 91 315-422 138-237 (315)
39 1nvt_A Shikimate 5'-dehydrogen 95.2 0.014 4.8E-07 56.3 4.2 118 212-375 32-159 (287)
40 2tmg_A Protein (glutamate dehy 95.2 0.64 2.2E-05 48.2 16.9 175 254-447 115-316 (415)
41 3t4e_A Quinate/shikimate dehyd 95.1 0.028 9.4E-07 56.0 6.2 91 315-422 132-231 (312)
42 2egg_A AROE, shikimate 5-dehyd 95.1 0.022 7.6E-07 55.7 5.4 87 316-422 125-215 (297)
43 2v6b_A L-LDH, L-lactate dehydr 95.0 0.0087 3E-07 58.6 2.4 110 333-457 2-126 (304)
44 2bma_A Glutamate dehydrogenase 94.9 0.57 1.9E-05 49.5 15.8 177 254-447 159-369 (470)
45 1pjc_A Protein (L-alanine dehy 94.9 0.04 1.4E-06 55.1 6.7 95 329-447 165-268 (361)
46 1t2d_A LDH-P, L-lactate dehydr 94.8 0.024 8.2E-07 56.2 4.8 108 332-458 5-137 (322)
47 2ewd_A Lactate dehydrogenase,; 94.8 0.047 1.6E-06 53.3 6.8 101 332-453 5-128 (317)
48 1v8b_A Adenosylhomocysteinase; 94.7 0.13 4.5E-06 54.3 10.4 113 305-448 234-346 (479)
49 2hk9_A Shikimate dehydrogenase 94.7 0.071 2.4E-06 51.1 7.6 108 315-447 113-222 (275)
50 2hjr_A Malate dehydrogenase; m 94.6 0.023 7.7E-07 56.5 4.2 112 332-458 15-142 (328)
51 1hyh_A L-hicdh, L-2-hydroxyiso 94.3 0.056 1.9E-06 52.5 6.2 104 332-452 2-128 (309)
52 3d64_A Adenosylhomocysteinase; 94.2 0.1 3.4E-06 55.3 8.3 108 309-447 258-365 (494)
53 2o4c_A Erythronate-4-phosphate 94.1 0.34 1.1E-05 49.6 11.5 65 299-375 81-148 (380)
54 1mld_A Malate dehydrogenase; o 94.0 0.073 2.5E-06 52.5 6.4 105 333-453 2-124 (314)
55 1v9l_A Glutamate dehydrogenase 94.0 0.39 1.3E-05 49.9 12.0 116 254-382 116-250 (421)
56 1a5z_A L-lactate dehydrogenase 93.9 0.099 3.4E-06 51.3 7.1 104 333-457 2-126 (319)
57 2d5c_A AROE, shikimate 5-dehyd 93.6 0.1 3.5E-06 49.3 6.4 81 316-422 102-182 (263)
58 3u62_A Shikimate dehydrogenase 93.6 0.042 1.4E-06 52.8 3.7 106 316-452 96-207 (253)
59 2g1u_A Hypothetical protein TM 93.5 0.1 3.5E-06 45.1 5.7 105 327-450 15-123 (155)
60 2eez_A Alanine dehydrogenase; 93.5 0.077 2.6E-06 53.1 5.5 97 328-448 163-268 (369)
61 3ce6_A Adenosylhomocysteinase; 93.4 0.63 2.2E-05 49.2 12.6 98 323-449 266-364 (494)
62 2i6t_A Ubiquitin-conjugating e 93.4 0.13 4.3E-06 50.8 6.8 103 332-452 15-131 (303)
63 2ekl_A D-3-phosphoglycerate de 93.4 0.9 3.1E-05 44.7 13.0 66 298-375 90-174 (313)
64 3fbt_A Chorismate mutase and s 93.4 0.11 3.9E-06 50.9 6.4 104 316-449 107-218 (282)
65 3u95_A Glycoside hydrolase, fa 93.4 0.12 4.1E-06 54.2 6.9 26 427-452 140-165 (477)
66 3oet_A Erythronate-4-phosphate 93.3 0.49 1.7E-05 48.5 11.2 65 298-374 83-150 (381)
67 1o6z_A MDH, malate dehydrogena 93.3 0.065 2.2E-06 52.4 4.6 107 332-452 1-125 (303)
68 2rir_A Dipicolinate synthase, 93.3 0.26 8.9E-06 47.6 8.7 100 322-447 148-247 (300)
69 1b8p_A Protein (malate dehydro 93.3 0.071 2.4E-06 52.7 4.8 114 331-452 5-139 (329)
70 3o8q_A Shikimate 5-dehydrogena 93.2 0.12 4.2E-06 50.4 6.4 137 262-422 50-198 (281)
71 3dtt_A NADP oxidoreductase; st 93.2 0.16 5.6E-06 47.5 7.0 109 325-449 13-127 (245)
72 1bgv_A Glutamate dehydrogenase 93.2 2.7 9.3E-05 44.0 16.8 176 255-447 137-347 (449)
73 3tri_A Pyrroline-5-carboxylate 93.1 0.13 4.6E-06 49.4 6.4 36 331-375 3-38 (280)
74 1ldn_A L-lactate dehydrogenase 92.6 0.057 1.9E-06 53.2 3.0 108 332-452 7-129 (316)
75 3tum_A Shikimate dehydrogenase 92.5 0.2 6.8E-06 48.8 6.6 48 316-374 110-157 (269)
76 1gtm_A Glutamate dehydrogenase 92.4 1.3 4.4E-05 45.8 13.0 166 254-433 115-309 (419)
77 1ur5_A Malate dehydrogenase; o 92.4 0.1 3.5E-06 51.1 4.5 113 332-459 3-131 (309)
78 2gcg_A Glyoxylate reductase/hy 92.3 1 3.5E-05 44.4 11.7 67 297-375 97-187 (330)
79 1zud_1 Adenylyltransferase THI 92.3 0.13 4.4E-06 49.0 5.0 103 328-445 25-150 (251)
80 2dbq_A Glyoxylate reductase; D 92.3 1.6 5.4E-05 43.2 13.0 66 298-375 89-182 (334)
81 2zqz_A L-LDH, L-lactate dehydr 92.3 0.096 3.3E-06 52.1 4.2 109 331-452 9-131 (326)
82 1ez4_A Lactate dehydrogenase; 92.1 0.12 4.1E-06 51.1 4.7 108 332-452 6-127 (318)
83 1leh_A Leucine dehydrogenase; 92.1 0.32 1.1E-05 49.4 7.9 157 259-447 93-261 (364)
84 3kkj_A Amine oxidase, flavin-c 92.1 0.13 4.4E-06 43.7 4.2 31 333-375 4-34 (336)
85 1nyt_A Shikimate 5-dehydrogena 91.9 0.28 9.5E-06 46.9 6.8 49 315-375 103-151 (271)
86 2rcy_A Pyrroline carboxylate r 91.9 0.73 2.5E-05 42.7 9.4 37 331-375 4-40 (262)
87 1lu9_A Methylene tetrahydromet 91.8 1.3 4.6E-05 42.1 11.5 119 281-422 64-199 (287)
88 3vku_A L-LDH, L-lactate dehydr 91.8 0.15 5.3E-06 50.9 5.0 110 330-452 8-131 (326)
89 2vhw_A Alanine dehydrogenase; 91.7 0.16 5.5E-06 51.1 5.2 95 328-446 165-268 (377)
90 3d0o_A L-LDH 1, L-lactate dehy 91.7 0.11 3.7E-06 51.2 3.9 110 330-452 5-129 (317)
91 1p77_A Shikimate 5-dehydrogena 91.6 0.21 7.3E-06 47.7 5.6 49 315-375 103-151 (272)
92 2hmt_A YUAA protein; RCK, KTN, 91.5 0.095 3.2E-06 43.3 2.7 104 329-450 4-109 (144)
93 3h5n_A MCCB protein; ubiquitin 91.5 0.55 1.9E-05 47.1 8.7 103 327-444 114-240 (353)
94 3d1l_A Putative NADP oxidoredu 91.3 0.19 6.6E-06 46.9 4.9 97 327-447 6-103 (266)
95 1c1d_A L-phenylalanine dehydro 91.3 1.4 4.6E-05 44.8 11.4 161 256-447 93-262 (355)
96 1oju_A MDH, malate dehydrogena 91.1 0.19 6.4E-06 49.4 4.8 107 333-452 2-124 (294)
97 3fef_A Putative glucosidase LP 91.1 0.2 6.8E-06 52.4 5.2 109 329-452 3-152 (450)
98 1y6j_A L-lactate dehydrogenase 90.9 0.24 8.1E-06 48.9 5.3 102 332-452 8-129 (318)
99 1wwk_A Phosphoglycerate dehydr 90.9 1.3 4.4E-05 43.4 10.6 54 310-375 103-174 (307)
100 3i83_A 2-dehydropantoate 2-red 90.8 0.42 1.4E-05 46.4 6.9 96 332-448 3-107 (320)
101 3pqe_A L-LDH, L-lactate dehydr 90.8 0.14 4.9E-06 51.1 3.6 113 331-457 5-132 (326)
102 1guz_A Malate dehydrogenase; o 90.7 0.5 1.7E-05 46.1 7.4 103 333-452 2-124 (310)
103 4g2n_A D-isomer specific 2-hyd 90.7 2.6 8.8E-05 42.4 12.7 121 298-447 116-264 (345)
104 1xdw_A NAD+-dependent (R)-2-hy 90.6 2 6.8E-05 42.5 11.7 136 279-446 73-234 (331)
105 1lld_A L-lactate dehydrogenase 90.6 0.18 6E-06 48.6 3.9 105 331-452 7-130 (319)
106 1obb_A Maltase, alpha-glucosid 90.5 0.17 5.9E-06 53.3 4.1 108 331-452 3-158 (480)
107 3ba1_A HPPR, hydroxyphenylpyru 90.3 1.7 5.8E-05 43.3 11.0 38 326-375 159-196 (333)
108 1hye_A L-lactate/malate dehydr 90.2 0.3 1E-05 47.8 5.3 105 333-452 2-128 (313)
109 3p7m_A Malate dehydrogenase; p 90.2 0.16 5.5E-06 50.5 3.4 109 330-452 4-128 (321)
110 2xxj_A L-LDH, L-lactate dehydr 90.2 0.12 4.1E-06 50.9 2.4 104 332-452 1-122 (310)
111 1sc6_A PGDH, D-3-phosphoglycer 90.1 3.3 0.00011 42.4 13.2 67 297-375 90-177 (404)
112 3jtm_A Formate dehydrogenase, 90.1 2.5 8.4E-05 42.6 12.0 123 298-447 108-257 (351)
113 3nep_X Malate dehydrogenase; h 90.1 0.21 7.3E-06 49.5 4.2 109 332-453 1-125 (314)
114 3phh_A Shikimate dehydrogenase 90.0 0.97 3.3E-05 44.1 8.7 100 316-448 107-212 (269)
115 3gvi_A Malate dehydrogenase; N 90.0 0.22 7.4E-06 49.7 4.1 110 329-453 5-131 (324)
116 1smk_A Malate dehydrogenase, g 90.0 0.35 1.2E-05 47.7 5.6 107 332-452 9-131 (326)
117 3mw9_A GDH 1, glutamate dehydr 89.9 2 6.8E-05 45.7 11.5 177 253-447 136-349 (501)
118 1hyu_A AHPF, alkyl hydroperoxi 89.6 0.3 1E-05 50.7 5.1 99 262-375 135-244 (521)
119 1s6y_A 6-phospho-beta-glucosid 89.6 0.22 7.6E-06 51.8 4.0 110 332-452 8-158 (450)
120 1x0v_A GPD-C, GPDH-C, glycerol 89.5 0.8 2.7E-05 44.4 7.7 107 331-448 8-126 (354)
121 4huj_A Uncharacterized protein 89.5 0.26 8.9E-06 45.4 4.0 21 332-352 24-44 (220)
122 2cuk_A Glycerate dehydrogenase 89.5 3.2 0.00011 40.7 12.1 66 298-375 87-176 (311)
123 1up7_A 6-phospho-beta-glucosid 89.5 0.4 1.4E-05 49.4 5.8 107 332-452 3-147 (417)
124 1txg_A Glycerol-3-phosphate de 89.5 0.58 2E-05 44.7 6.6 100 333-449 2-107 (335)
125 3k5p_A D-3-phosphoglycerate de 89.5 3.9 0.00013 42.3 13.1 67 297-375 101-188 (416)
126 2zyd_A 6-phosphogluconate dehy 89.4 0.67 2.3E-05 48.3 7.5 101 329-449 13-116 (480)
127 1qp8_A Formate dehydrogenase; 89.3 3.9 0.00013 40.1 12.5 67 298-376 71-157 (303)
128 1z82_A Glycerol-3-phosphate de 89.3 0.36 1.2E-05 46.9 5.1 33 331-375 14-46 (335)
129 3h8v_A Ubiquitin-like modifier 89.2 0.43 1.5E-05 47.1 5.5 39 327-376 32-70 (292)
130 4e12_A Diketoreductase; oxidor 89.1 0.13 4.3E-06 49.3 1.6 32 332-375 5-36 (283)
131 2j6i_A Formate dehydrogenase; 89.1 1.8 6.3E-05 43.5 10.2 86 279-375 88-197 (364)
132 4hy3_A Phosphoglycerate oxidor 89.0 1.4 4.7E-05 44.8 9.2 100 310-435 134-258 (365)
133 2d0i_A Dehydrogenase; structur 89.0 2.9 9.7E-05 41.4 11.3 37 327-375 142-178 (333)
134 1j4a_A D-LDH, D-lactate dehydr 88.9 4.9 0.00017 39.8 13.0 121 297-447 91-236 (333)
135 2yq5_A D-isomer specific 2-hyd 88.9 4.5 0.00015 40.6 12.8 118 298-446 92-236 (343)
136 3rui_A Ubiquitin-like modifier 88.5 0.29 1E-05 49.5 3.9 101 328-444 31-170 (340)
137 4dgs_A Dehydrogenase; structur 88.5 2.5 8.7E-05 42.4 10.7 97 310-435 130-250 (340)
138 3k96_A Glycerol-3-phosphate de 88.4 0.81 2.8E-05 45.8 7.0 100 331-448 29-135 (356)
139 1dxy_A D-2-hydroxyisocaproate 88.4 5.4 0.00018 39.5 12.9 118 298-446 90-233 (333)
140 4e21_A 6-phosphogluconate dehy 88.3 1.5 5E-05 44.1 8.9 96 329-449 20-118 (358)
141 1u8x_X Maltose-6'-phosphate gl 88.2 0.23 7.9E-06 52.1 3.1 109 331-452 28-177 (472)
142 1yj8_A Glycerol-3-phosphate de 88.2 0.61 2.1E-05 46.1 6.0 106 332-448 22-143 (375)
143 4aj2_A L-lactate dehydrogenase 87.9 0.24 8.3E-06 49.6 2.9 115 328-457 16-146 (331)
144 2d4a_B Malate dehydrogenase; a 87.7 0.29 1E-05 48.1 3.2 99 333-452 1-122 (308)
145 4gsl_A Ubiquitin-like modifier 87.5 0.5 1.7E-05 51.4 5.2 38 328-376 323-360 (615)
146 1jw9_B Molybdopterin biosynthe 87.5 0.42 1.4E-05 45.3 4.1 102 328-444 28-152 (249)
147 2p4q_A 6-phosphogluconate dehy 87.3 1.4 4.7E-05 46.3 8.2 98 332-449 11-112 (497)
148 3hg7_A D-isomer specific 2-hyd 87.3 1.6 5.6E-05 43.5 8.4 66 299-376 89-173 (324)
149 3evt_A Phosphoglycerate dehydr 87.2 1.9 6.5E-05 42.9 8.8 67 298-376 83-170 (324)
150 3b1f_A Putative prephenate deh 87.1 1.1 3.8E-05 42.3 6.7 35 331-375 6-40 (290)
151 1lss_A TRK system potassium up 87.1 0.58 2E-05 38.4 4.2 98 331-450 4-107 (140)
152 2pi1_A D-lactate dehydrogenase 87.0 5.5 0.00019 39.6 12.1 121 299-449 87-233 (334)
153 1hdo_A Biliverdin IX beta redu 87.0 1.7 5.8E-05 37.7 7.4 97 332-446 4-111 (206)
154 2w2k_A D-mandelate dehydrogena 87.0 5 0.00017 39.9 11.8 39 326-375 158-196 (348)
155 4fgw_A Glycerol-3-phosphate de 87.0 0.78 2.7E-05 47.1 6.0 97 332-437 35-141 (391)
156 2ew2_A 2-dehydropantoate 2-red 87.0 0.39 1.3E-05 45.1 3.5 32 332-375 4-35 (316)
157 3vrd_B FCCB subunit, flavocyto 86.9 0.64 2.2E-05 45.6 5.2 35 331-375 2-36 (401)
158 1f0y_A HCDH, L-3-hydroxyacyl-C 86.9 0.45 1.5E-05 45.6 4.0 32 332-375 16-47 (302)
159 2qrj_A Saccharopine dehydrogen 86.9 1.5 5E-05 45.3 8.0 71 331-433 214-289 (394)
160 3tl2_A Malate dehydrogenase; c 86.8 0.49 1.7E-05 46.9 4.3 111 329-453 6-134 (315)
161 3gt0_A Pyrroline-5-carboxylate 86.5 0.97 3.3E-05 42.0 5.9 36 332-375 3-38 (247)
162 1npy_A Hypothetical shikimate 86.4 0.92 3.2E-05 43.9 5.9 48 316-375 105-152 (271)
163 3gvx_A Glycerate dehydrogenase 86.3 5.3 0.00018 39.1 11.3 38 327-376 118-155 (290)
164 1y7t_A Malate dehydrogenase; N 86.3 0.5 1.7E-05 46.1 4.0 111 332-450 5-134 (327)
165 2izz_A Pyrroline-5-carboxylate 86.0 2.1 7.1E-05 41.6 8.2 38 330-375 21-58 (322)
166 1ks9_A KPA reductase;, 2-dehyd 86.0 1 3.5E-05 41.9 5.8 95 333-449 2-100 (291)
167 2raf_A Putative dinucleotide-b 85.9 0.86 3E-05 41.7 5.2 37 327-375 15-51 (209)
168 2i99_A MU-crystallin homolog; 85.9 1.6 5.5E-05 42.5 7.4 103 317-446 123-226 (312)
169 3ado_A Lambda-crystallin; L-gu 85.8 0.98 3.3E-05 45.1 5.9 32 331-374 6-37 (319)
170 2nac_A NAD-dependent formate d 85.8 3.4 0.00012 42.3 10.0 38 326-375 186-223 (393)
171 2x0j_A Malate dehydrogenase; o 85.7 1.1 3.7E-05 44.2 6.1 109 332-453 1-125 (294)
172 1jay_A Coenzyme F420H2:NADP+ o 85.5 0.32 1.1E-05 43.6 2.0 94 333-450 2-101 (212)
173 1gdh_A D-glycerate dehydrogena 85.4 4.2 0.00014 40.0 10.1 65 298-374 89-177 (320)
174 3e8x_A Putative NAD-dependent 85.4 1.3 4.6E-05 39.9 6.1 97 327-446 17-131 (236)
175 1x7d_A Ornithine cyclodeaminas 85.2 1.8 6.2E-05 43.3 7.5 86 316-422 116-205 (350)
176 3fi9_A Malate dehydrogenase; s 85.2 0.79 2.7E-05 46.1 4.9 110 330-453 7-133 (343)
177 4egb_A DTDP-glucose 4,6-dehydr 85.1 2.7 9.1E-05 39.9 8.4 105 329-445 22-148 (346)
178 3c85_A Putative glutathione-re 85.1 0.29 1E-05 43.1 1.5 36 329-375 37-72 (183)
179 2g76_A 3-PGDH, D-3-phosphoglyc 85.0 4.4 0.00015 40.4 10.2 65 299-375 112-197 (335)
180 2dpo_A L-gulonate 3-dehydrogen 84.8 0.26 9E-06 48.8 1.2 33 331-375 6-38 (319)
181 3qsg_A NAD-binding phosphogluc 84.4 4.8 0.00017 38.9 10.0 34 331-375 24-57 (312)
182 3ldh_A Lactate dehydrogenase; 84.3 0.38 1.3E-05 48.3 2.1 108 331-452 21-144 (330)
183 2h78_A Hibadh, 3-hydroxyisobut 84.3 0.88 3E-05 43.3 4.5 32 332-375 4-35 (302)
184 3c24_A Putative oxidoreductase 84.2 1.7 5.8E-05 41.1 6.5 90 332-448 12-103 (286)
185 3pp8_A Glyoxylate/hydroxypyruv 84.2 2.9 9.9E-05 41.4 8.4 66 298-375 86-171 (315)
186 1y8q_A Ubiquitin-like 1 activa 84.2 0.81 2.8E-05 45.8 4.4 38 327-375 32-69 (346)
187 4dll_A 2-hydroxy-3-oxopropiona 83.8 0.87 3E-05 44.3 4.4 34 330-375 30-63 (320)
188 3pef_A 6-phosphogluconate dehy 83.7 1.2 4E-05 42.3 5.1 32 332-375 2-33 (287)
189 4hb9_A Similarities with proba 83.7 0.96 3.3E-05 43.4 4.6 32 332-375 2-33 (412)
190 3gpi_A NAD-dependent epimerase 83.7 1.1 3.7E-05 41.6 4.8 95 331-445 3-108 (286)
191 3k6j_A Protein F01G10.3, confi 83.6 1.2 3.9E-05 46.8 5.5 32 332-375 55-86 (460)
192 3vh1_A Ubiquitin-like modifier 83.6 0.61 2.1E-05 50.6 3.4 38 327-375 323-360 (598)
193 3gg9_A D-3-phosphoglycerate de 83.5 4.8 0.00016 40.5 9.7 93 326-446 155-251 (352)
194 2g5c_A Prephenate dehydrogenas 83.4 3 0.0001 39.1 7.8 34 332-375 2-35 (281)
195 3dhn_A NAD-dependent epimerase 83.3 1.4 5E-05 39.1 5.3 97 332-446 5-112 (227)
196 2uyy_A N-PAC protein; long-cha 83.3 1.4 4.7E-05 42.3 5.5 32 332-375 31-62 (316)
197 1yb4_A Tartronic semialdehyde 83.2 1.8 6.2E-05 40.6 6.2 30 332-373 4-33 (295)
198 1mx3_A CTBP1, C-terminal bindi 83.1 7.2 0.00024 39.0 10.8 84 279-375 89-200 (347)
199 1pgj_A 6PGDH, 6-PGDH, 6-phosph 83.1 1.6 5.5E-05 45.3 6.3 97 333-449 3-106 (478)
200 5mdh_A Malate dehydrogenase; o 83.1 0.39 1.3E-05 48.0 1.6 114 332-453 4-136 (333)
201 3kb6_A D-lactate dehydrogenase 82.6 5.9 0.0002 39.4 9.9 83 326-435 136-222 (334)
202 3l6d_A Putative oxidoreductase 82.6 1.2 4.2E-05 42.9 4.9 36 328-375 6-41 (306)
203 4ezb_A Uncharacterized conserv 82.3 1.8 6.2E-05 42.2 6.0 33 332-375 25-57 (317)
204 4gwg_A 6-phosphogluconate dehy 82.3 2.3 7.9E-05 44.7 7.2 98 332-449 5-106 (484)
205 3ggo_A Prephenate dehydrogenas 82.2 3.5 0.00012 40.3 8.0 35 331-375 33-67 (314)
206 3pdu_A 3-hydroxyisobutyrate de 82.1 1.6 5.4E-05 41.4 5.4 32 332-375 2-33 (287)
207 2iz1_A 6-phosphogluconate dehy 81.8 2.5 8.7E-05 43.7 7.2 99 331-449 5-106 (474)
208 2vns_A Metalloreductase steap3 81.7 1.2 4.3E-05 40.7 4.3 96 327-450 24-119 (215)
209 2pv7_A T-protein [includes: ch 81.5 3.5 0.00012 39.6 7.6 32 332-375 22-54 (298)
210 4e5n_A Thermostable phosphite 81.3 4.7 0.00016 40.0 8.6 122 298-447 89-237 (330)
211 4a9w_A Monooxygenase; baeyer-v 81.0 1.2 4.2E-05 41.6 4.1 34 331-376 3-36 (357)
212 3fbs_A Oxidoreductase; structu 80.9 1.4 4.7E-05 40.4 4.3 32 332-375 3-34 (297)
213 1omo_A Alanine dehydrogenase; 80.8 3.6 0.00012 40.4 7.6 100 317-445 113-216 (322)
214 3doj_A AT3G25530, dehydrogenas 80.8 2.7 9.3E-05 40.5 6.6 36 328-375 18-53 (310)
215 3oz2_A Digeranylgeranylglycero 80.8 1.3 4.4E-05 42.0 4.2 31 333-375 6-36 (397)
216 2pzm_A Putative nucleotide sug 80.6 3.3 0.00011 39.4 7.0 102 327-445 16-135 (330)
217 3r6d_A NAD-dependent epimerase 80.5 1.1 3.9E-05 40.0 3.5 94 332-444 6-106 (221)
218 3d1c_A Flavin-containing putat 80.5 1.4 4.8E-05 42.0 4.4 35 331-376 4-38 (369)
219 3abi_A Putative uncharacterize 80.4 0.54 1.8E-05 46.6 1.5 79 332-435 17-99 (365)
220 2f1k_A Prephenate dehydrogenas 80.4 3.4 0.00012 38.5 7.0 31 333-375 2-32 (279)
221 2pgd_A 6-phosphogluconate dehy 80.3 2.7 9.3E-05 43.5 6.8 98 332-449 3-104 (482)
222 3lzw_A Ferredoxin--NADP reduct 80.2 1.5 5.2E-05 40.8 4.4 34 331-376 7-40 (332)
223 3f8d_A Thioredoxin reductase ( 80.1 1.5 5.2E-05 40.5 4.4 33 331-375 15-47 (323)
224 3cky_A 2-hydroxymethyl glutara 80.0 1.3 4.4E-05 41.9 3.9 32 332-375 5-36 (301)
225 3hn2_A 2-dehydropantoate 2-red 80.0 1.3 4.4E-05 42.7 4.0 33 332-376 3-35 (312)
226 4b4u_A Bifunctional protein fo 79.9 4.6 0.00016 40.4 8.0 85 310-432 158-243 (303)
227 4id9_A Short-chain dehydrogena 79.7 4.1 0.00014 38.6 7.4 97 327-446 15-126 (347)
228 1id1_A Putative potassium chan 79.7 1 3.6E-05 38.5 2.9 103 330-450 2-110 (153)
229 2zbw_A Thioredoxin reductase; 79.4 1.6 5.5E-05 41.1 4.4 34 331-376 5-38 (335)
230 1bg6_A N-(1-D-carboxylethyl)-L 79.4 4.9 0.00017 38.5 7.9 93 332-447 5-110 (359)
231 1i36_A Conserved hypothetical 79.2 3.7 0.00013 37.9 6.8 30 333-374 2-31 (264)
232 3hhp_A Malate dehydrogenase; M 79.2 1.6 5.4E-05 43.3 4.4 107 333-453 2-125 (312)
233 3alj_A 2-methyl-3-hydroxypyrid 79.2 1.8 6.1E-05 42.1 4.7 37 329-377 9-45 (379)
234 3ip1_A Alcohol dehydrogenase, 79.0 4.2 0.00014 40.5 7.5 93 318-433 200-304 (404)
235 3itj_A Thioredoxin reductase 1 78.5 1.4 4.9E-05 41.0 3.7 33 331-375 22-54 (338)
236 3qha_A Putative oxidoreductase 77.9 3.1 0.00011 39.8 5.9 91 331-447 15-106 (296)
237 2q7v_A Thioredoxin reductase; 77.7 1.8 6.2E-05 40.7 4.2 33 331-375 8-40 (325)
238 1tt5_B Ubiquitin-activating en 77.7 1.4 4.7E-05 45.7 3.6 38 327-375 36-73 (434)
239 3l4b_C TRKA K+ channel protien 77.6 1.5 5.2E-05 39.7 3.5 93 333-448 2-101 (218)
240 1vpd_A Tartronate semialdehyde 77.6 1.4 4.8E-05 41.6 3.3 32 332-375 6-37 (299)
241 3fg2_P Putative rubredoxin red 77.5 1.9 6.5E-05 42.6 4.4 35 332-376 2-36 (404)
242 2q1w_A Putative nucleotide sug 77.5 6.8 0.00023 37.2 8.2 103 328-445 18-136 (333)
243 2jae_A L-amino acid oxidase; o 77.1 2 6.8E-05 43.2 4.5 42 324-377 4-45 (489)
244 3ef6_A Toluene 1,2-dioxygenase 77.1 3.8 0.00013 40.7 6.5 37 332-378 3-39 (410)
245 3klj_A NAD(FAD)-dependent dehy 77.0 2.2 7.4E-05 42.6 4.7 37 330-378 8-44 (385)
246 3nix_A Flavoprotein/dehydrogen 76.9 2.9 9.8E-05 40.8 5.5 34 331-376 5-38 (421)
247 3m2p_A UDP-N-acetylglucosamine 76.7 7.1 0.00024 36.5 8.0 92 332-445 3-108 (311)
248 3dme_A Conserved exported prot 76.6 2.3 8E-05 40.0 4.6 33 331-375 4-36 (369)
249 3rp8_A Flavoprotein monooxygen 76.5 2.3 8E-05 41.6 4.7 36 329-376 21-56 (407)
250 2bka_A CC3, TAT-interacting pr 76.4 6.9 0.00023 35.0 7.5 102 329-446 16-132 (242)
251 1yqg_A Pyrroline-5-carboxylate 76.4 16 0.00055 33.5 10.2 32 333-375 2-33 (263)
252 1ryi_A Glycine oxidase; flavop 76.4 2.3 8E-05 40.7 4.6 35 331-377 17-51 (382)
253 3cty_A Thioredoxin reductase; 76.4 2.2 7.6E-05 40.0 4.3 33 331-375 16-48 (319)
254 3r9u_A Thioredoxin reductase; 76.3 2.1 7.3E-05 39.4 4.2 33 331-375 4-37 (315)
255 3hdj_A Probable ornithine cycl 76.3 8.2 0.00028 38.0 8.6 90 330-447 120-214 (313)
256 3hwr_A 2-dehydropantoate 2-red 76.3 1.6 5.6E-05 42.3 3.5 26 328-353 16-41 (318)
257 3ab1_A Ferredoxin--NADP reduct 76.2 2.4 8.1E-05 40.6 4.6 34 331-376 14-47 (360)
258 3h8l_A NADH oxidase; membrane 76.2 2.3 7.9E-05 41.8 4.6 36 332-376 2-37 (409)
259 2x3n_A Probable FAD-dependent 76.2 2.2 7.5E-05 41.6 4.4 34 331-376 6-39 (399)
260 3lxd_A FAD-dependent pyridine 76.1 2.3 7.7E-05 42.2 4.5 38 330-377 8-45 (415)
261 3cgv_A Geranylgeranyl reductas 76.1 2.3 7.8E-05 40.8 4.4 34 331-376 4-37 (397)
262 3ego_A Probable 2-dehydropanto 76.1 0.89 3.1E-05 44.0 1.6 31 332-375 3-33 (307)
263 3fwz_A Inner membrane protein 76.0 1 3.5E-05 38.2 1.8 32 332-375 8-39 (140)
264 2vou_A 2,6-dihydroxypyridine h 76.0 2.7 9.4E-05 41.1 5.0 35 330-376 4-38 (397)
265 1y8q_B Anthracycline-, ubiquit 75.9 1.8 6.3E-05 47.2 4.1 39 327-376 13-51 (640)
266 2yjz_A Metalloreductase steap4 77.7 0.55 1.9E-05 43.1 0.0 25 329-353 17-41 (201)
267 3hyw_A Sulfide-quinone reducta 75.8 2.9 9.8E-05 41.9 5.2 34 332-375 3-36 (430)
268 2xdo_A TETX2 protein; tetracyc 75.6 2.3 8E-05 41.6 4.4 36 329-376 24-59 (398)
269 3slg_A PBGP3 protein; structur 75.5 9.1 0.00031 36.7 8.5 101 328-446 21-141 (372)
270 3g0o_A 3-hydroxyisobutyrate de 75.1 2.5 8.4E-05 40.5 4.4 33 331-375 7-39 (303)
271 1yvv_A Amine oxidase, flavin-c 75.1 2.3 8E-05 39.8 4.1 33 332-376 3-35 (336)
272 3k7m_X 6-hydroxy-L-nicotine ox 75.0 2.8 9.4E-05 41.1 4.8 32 333-376 3-34 (431)
273 2gag_B Heterotetrameric sarcos 74.9 3 0.0001 40.2 4.9 35 331-376 21-56 (405)
274 2ywl_A Thioredoxin reductase r 74.9 2.7 9.3E-05 36.2 4.2 35 332-378 2-37 (180)
275 1y56_B Sarcosine oxidase; dehy 74.4 2.5 8.7E-05 40.6 4.3 34 331-376 5-38 (382)
276 3ic5_A Putative saccharopine d 74.3 3.4 0.00012 32.6 4.3 84 331-436 5-92 (118)
277 2z1m_A GDP-D-mannose dehydrata 74.3 5.6 0.00019 37.3 6.5 101 330-446 2-127 (345)
278 2gf3_A MSOX, monomeric sarcosi 74.0 2.8 9.4E-05 40.2 4.4 35 332-378 4-38 (389)
279 2vdc_G Glutamate synthase [NAD 73.7 3.1 0.0001 42.7 4.9 35 330-376 121-155 (456)
280 1trb_A Thioredoxin reductase; 73.6 2 6.9E-05 40.0 3.2 34 330-375 4-37 (320)
281 2uzz_A N-methyl-L-tryptophan o 73.4 2.8 9.6E-05 40.0 4.3 35 332-378 3-37 (372)
282 2xve_A Flavin-containing monoo 73.3 2.8 9.6E-05 42.7 4.5 38 332-375 3-40 (464)
283 3i6i_A Putative leucoanthocyan 73.2 1.3 4.6E-05 42.4 2.0 95 329-443 8-117 (346)
284 1k0i_A P-hydroxybenzoate hydro 73.1 3.2 0.00011 40.2 4.7 33 332-376 3-35 (394)
285 1zk7_A HGII, reductase, mercur 73.1 3.2 0.00011 41.9 4.8 33 331-375 4-36 (467)
286 1vdc_A NTR, NADPH dependent th 73.0 2.4 8.3E-05 39.8 3.7 33 330-374 7-39 (333)
287 3axb_A Putative oxidoreductase 72.9 3.3 0.00011 41.1 4.8 36 328-374 20-55 (448)
288 1np3_A Ketol-acid reductoisome 72.9 3.5 0.00012 40.6 5.0 35 329-375 14-48 (338)
289 1ygy_A PGDH, D-3-phosphoglycer 72.9 11 0.00038 39.5 9.1 66 298-375 88-174 (529)
290 2q0l_A TRXR, thioredoxin reduc 72.8 3 0.0001 38.7 4.3 33 332-375 2-34 (311)
291 1pqw_A Polyketide synthase; ro 72.6 9.5 0.00033 33.5 7.3 50 314-375 22-72 (198)
292 3c96_A Flavin-containing monoo 72.5 3.1 0.00011 40.9 4.5 34 331-375 4-37 (410)
293 2oln_A NIKD protein; flavoprot 72.5 3.2 0.00011 40.3 4.5 36 331-378 4-39 (397)
294 1c0p_A D-amino acid oxidase; a 72.2 3.9 0.00013 39.3 5.0 34 331-376 6-39 (363)
295 4eqs_A Coenzyme A disulfide re 72.1 2.9 0.0001 42.2 4.3 34 333-376 2-35 (437)
296 2ahr_A Putative pyrroline carb 72.0 2.9 0.0001 38.6 3.9 32 332-375 4-35 (259)
297 3nrc_A Enoyl-[acyl-carrier-pro 72.0 5.2 0.00018 37.4 5.7 78 328-422 23-114 (280)
298 3i3l_A Alkylhalidase CMLS; fla 71.9 5 0.00017 42.7 6.2 37 329-377 21-57 (591)
299 3uox_A Otemo; baeyer-villiger 71.7 3.3 0.00011 43.4 4.7 35 330-376 8-42 (545)
300 3llv_A Exopolyphosphatase-rela 71.6 3.6 0.00012 34.3 4.1 34 330-375 5-38 (141)
301 3s2u_A UDP-N-acetylglucosamine 71.5 4.6 0.00016 39.6 5.5 40 404-447 85-124 (365)
302 3s5w_A L-ornithine 5-monooxyge 71.3 2.7 9.2E-05 41.9 3.7 38 331-376 30-68 (463)
303 2gv8_A Monooxygenase; FMO, FAD 71.3 3.1 0.00011 41.7 4.2 36 330-375 5-40 (447)
304 4gcm_A TRXR, thioredoxin reduc 71.3 3.3 0.00011 38.8 4.2 32 332-375 7-38 (312)
305 3ehe_A UDP-glucose 4-epimerase 71.1 12 0.0004 35.0 7.9 95 333-446 3-114 (313)
306 1dxl_A Dihydrolipoamide dehydr 70.8 3.9 0.00013 41.1 4.8 33 331-375 6-38 (470)
307 1e6u_A GDP-fucose synthetase; 70.7 4.7 0.00016 37.7 5.1 87 331-446 3-107 (321)
308 2gqw_A Ferredoxin reductase; f 70.7 4.2 0.00014 40.4 5.0 39 331-379 7-45 (408)
309 3ka7_A Oxidoreductase; structu 70.6 4.3 0.00015 39.6 4.9 32 333-376 2-33 (425)
310 3h28_A Sulfide-quinone reducta 70.5 3.8 0.00013 40.8 4.6 35 332-376 3-37 (430)
311 2r9z_A Glutathione amide reduc 70.3 3.7 0.00013 41.7 4.5 33 331-375 4-36 (463)
312 3dqp_A Oxidoreductase YLBE; al 70.3 8 0.00028 34.3 6.3 94 333-446 2-106 (219)
313 2q1s_A Putative nucleotide sug 70.1 8.1 0.00028 37.4 6.8 102 328-445 29-150 (377)
314 3iwa_A FAD-dependent pyridine 70.0 3.7 0.00013 41.5 4.4 37 331-377 3-39 (472)
315 2a87_A TRXR, TR, thioredoxin r 69.8 3.3 0.00011 39.3 3.8 34 330-375 13-46 (335)
316 4ap3_A Steroid monooxygenase; 69.8 3.7 0.00013 43.1 4.5 35 330-376 20-54 (549)
317 1fl2_A Alkyl hydroperoxide red 69.7 3.5 0.00012 38.2 4.0 32 332-375 2-33 (310)
318 3v76_A Flavoprotein; structura 69.7 3.5 0.00012 41.8 4.2 35 331-377 27-61 (417)
319 3nrn_A Uncharacterized protein 69.6 4.6 0.00016 39.7 4.9 32 333-376 2-33 (421)
320 2hqm_A GR, grase, glutathione 69.6 3.6 0.00012 41.8 4.3 35 330-376 10-44 (479)
321 3qvo_A NMRA family protein; st 69.5 5.9 0.0002 35.9 5.3 101 329-446 21-125 (236)
322 3e48_A Putative nucleoside-dip 69.5 6.1 0.00021 36.5 5.5 95 333-444 2-104 (289)
323 3pdi_B Nitrogenase MOFE cofact 69.4 3.9 0.00013 42.4 4.6 75 327-420 309-384 (458)
324 3cgb_A Pyridine nucleotide-dis 69.4 4.9 0.00017 40.9 5.2 64 304-377 6-72 (480)
325 2qae_A Lipoamide, dihydrolipoy 69.1 4.1 0.00014 41.1 4.5 34 331-376 2-35 (468)
326 2c20_A UDP-glucose 4-epimerase 69.1 8.6 0.0003 36.0 6.5 98 332-445 2-117 (330)
327 2weu_A Tryptophan 5-halogenase 69.0 3.4 0.00012 42.0 4.0 37 332-377 3-39 (511)
328 2e4g_A Tryptophan halogenase; 69.0 3.8 0.00013 42.6 4.4 38 331-377 25-62 (550)
329 2eq6_A Pyruvate dehydrogenase 68.9 3.8 0.00013 41.5 4.3 34 331-376 6-39 (464)
330 3ihm_A Styrene monooxygenase A 68.7 4.1 0.00014 40.8 4.4 32 332-375 23-54 (430)
331 4a5l_A Thioredoxin reductase; 68.7 3.4 0.00012 38.3 3.6 31 333-375 6-36 (314)
332 4b8w_A GDP-L-fucose synthase; 68.7 6.5 0.00022 36.0 5.4 91 328-444 3-111 (319)
333 3ew7_A LMO0794 protein; Q8Y8U8 68.6 16 0.00054 31.8 7.8 91 333-446 2-103 (221)
334 3urh_A Dihydrolipoyl dehydroge 68.5 4.1 0.00014 41.4 4.4 34 331-376 25-58 (491)
335 4g6h_A Rotenone-insensitive NA 68.4 2.2 7.4E-05 44.3 2.4 32 332-375 43-74 (502)
336 1tt5_A APPBP1, amyloid protein 68.4 2.6 9E-05 44.7 3.1 102 327-444 28-155 (531)
337 3enk_A UDP-glucose 4-epimerase 68.4 15 0.00052 34.5 8.1 97 331-446 5-129 (341)
338 2aqj_A Tryptophan halogenase, 68.1 4.3 0.00015 41.8 4.6 37 331-376 5-41 (538)
339 3ek2_A Enoyl-(acyl-carrier-pro 68.0 4.6 0.00016 37.0 4.3 38 326-375 9-49 (271)
340 3qj4_A Renalase; FAD/NAD(P)-bi 68.0 3 0.0001 39.8 3.1 34 333-375 3-36 (342)
341 3k30_A Histamine dehydrogenase 68.0 5.3 0.00018 42.9 5.4 34 331-376 391-424 (690)
342 2yqu_A 2-oxoglutarate dehydrog 67.9 4.3 0.00015 40.7 4.4 33 332-376 2-34 (455)
343 3dje_A Fructosyl amine: oxygen 67.9 4.2 0.00014 40.1 4.2 37 331-378 6-42 (438)
344 1n2s_A DTDP-4-, DTDP-glucose o 67.9 6.5 0.00022 36.3 5.3 86 333-446 2-104 (299)
345 3gg2_A Sugar dehydrogenase, UD 67.8 3.4 0.00012 42.7 3.7 32 332-375 3-34 (450)
346 2cul_A Glucose-inhibited divis 67.7 4.6 0.00016 36.8 4.2 33 331-375 3-35 (232)
347 1w4x_A Phenylacetone monooxyge 67.6 4.9 0.00017 41.7 4.9 35 330-376 15-49 (542)
348 3grf_A Ornithine carbamoyltran 67.6 17 0.00057 36.5 8.6 129 271-417 98-240 (328)
349 1mo9_A ORF3; nucleotide bindin 67.6 4.1 0.00014 42.1 4.2 35 330-376 42-76 (523)
350 1zmd_A Dihydrolipoyl dehydroge 67.5 4.3 0.00015 41.0 4.3 34 331-376 6-39 (474)
351 2dq4_A L-threonine 3-dehydroge 67.5 5.7 0.00019 38.4 5.0 107 308-435 143-254 (343)
352 3ntd_A FAD-dependent pyridine 67.4 5.7 0.0002 40.8 5.3 37 332-378 2-38 (565)
353 2a8x_A Dihydrolipoyl dehydroge 67.4 4.3 0.00015 40.8 4.3 33 331-375 3-35 (464)
354 1yqd_A Sinapyl alcohol dehydro 66.9 12 0.0004 36.8 7.2 100 314-435 171-274 (366)
355 1m6i_A Programmed cell death p 66.7 5.8 0.0002 40.7 5.2 37 330-376 10-46 (493)
356 2bry_A NEDD9 interacting prote 66.7 5 0.00017 41.3 4.7 36 330-377 91-126 (497)
357 3vtz_A Glucose 1-dehydrogenase 66.6 16 0.00056 34.0 7.9 78 326-422 9-92 (269)
358 2qa2_A CABE, polyketide oxygen 66.6 4.7 0.00016 41.5 4.5 34 330-375 11-44 (499)
359 3fpz_A Thiazole biosynthetic e 66.5 4.7 0.00016 38.5 4.2 37 329-375 63-99 (326)
360 3sx6_A Sulfide-quinone reducta 66.3 5.1 0.00018 40.0 4.6 36 332-376 5-40 (437)
361 2bc0_A NADH oxidase; flavoprot 66.2 5.5 0.00019 40.6 4.9 37 331-376 35-71 (490)
362 1ebd_A E3BD, dihydrolipoamide 66.2 4.2 0.00014 40.8 4.0 32 332-375 4-35 (455)
363 1ges_A Glutathione reductase; 66.2 4 0.00014 41.1 3.8 33 331-375 4-36 (450)
364 4ep1_A Otcase, ornithine carba 66.0 30 0.001 34.9 10.1 128 271-420 123-256 (340)
365 3l8k_A Dihydrolipoyl dehydroge 66.0 5.3 0.00018 40.4 4.6 34 331-376 4-37 (466)
366 3kd9_A Coenzyme A disulfide re 65.9 6.9 0.00023 39.2 5.4 37 331-377 3-39 (449)
367 2o7s_A DHQ-SDH PR, bifunctiona 65.9 7 0.00024 40.9 5.7 36 328-375 361-396 (523)
368 3ics_A Coenzyme A-disulfide re 65.9 5.8 0.0002 41.3 5.1 39 330-378 35-73 (588)
369 2cvz_A Dehydrogenase, 3-hydrox 65.8 7.9 0.00027 36.0 5.5 29 333-374 3-31 (289)
370 3oc4_A Oxidoreductase, pyridin 65.8 5.5 0.00019 40.0 4.7 36 332-377 3-38 (452)
371 3c4a_A Probable tryptophan hyd 65.8 5.7 0.00019 38.7 4.7 20 333-352 2-21 (381)
372 1q1r_A Putidaredoxin reductase 65.7 5.9 0.0002 39.7 4.9 37 331-377 4-40 (431)
373 2c5a_A GDP-mannose-3', 5'-epim 65.7 21 0.00071 34.6 8.7 99 330-446 28-145 (379)
374 2x4g_A Nucleoside-diphosphate- 65.6 12 0.0004 35.2 6.7 96 332-445 14-125 (342)
375 2p5y_A UDP-glucose 4-epimerase 65.6 11 0.00036 35.3 6.3 98 333-446 2-117 (311)
376 3gwf_A Cyclohexanone monooxyge 65.5 4.1 0.00014 42.7 3.8 36 330-376 7-42 (540)
377 1onf_A GR, grase, glutathione 65.5 4.6 0.00016 41.3 4.2 33 332-376 3-35 (500)
378 1lvl_A Dihydrolipoamide dehydr 65.4 4.9 0.00017 40.6 4.3 33 331-375 5-37 (458)
379 2d8a_A PH0655, probable L-thre 65.4 5.4 0.00018 38.7 4.4 48 314-374 153-200 (348)
380 2cdc_A Glucose dehydrogenase g 65.3 18 0.00063 35.2 8.3 33 331-375 181-213 (366)
381 1v59_A Dihydrolipoamide dehydr 65.3 5.6 0.00019 40.1 4.6 34 331-376 5-38 (478)
382 4fk1_A Putative thioredoxin re 65.2 5 0.00017 37.6 4.0 32 332-375 7-38 (304)
383 4ej6_A Putative zinc-binding d 65.0 14 0.00048 36.3 7.4 57 306-374 159-215 (370)
384 4ina_A Saccharopine dehydrogen 65.0 2.7 9.3E-05 42.5 2.3 86 332-435 2-98 (405)
385 3dfz_A SIRC, precorrin-2 dehyd 65.0 4.8 0.00017 38.1 3.9 36 328-375 28-63 (223)
386 2qa1_A PGAE, polyketide oxygen 64.9 4.8 0.00017 41.5 4.2 35 329-375 9-43 (500)
387 2pyx_A Tryptophan halogenase; 64.9 5.1 0.00017 41.3 4.3 40 331-377 7-53 (526)
388 3uog_A Alcohol dehydrogenase; 64.7 5.2 0.00018 39.2 4.2 91 319-435 178-279 (363)
389 2wpf_A Trypanothione reductase 64.6 7 0.00024 40.1 5.3 32 331-373 7-38 (495)
390 2wtb_A MFP2, fatty acid multif 64.6 4.5 0.00015 44.3 4.1 32 332-375 313-344 (725)
391 1rsg_A FMS1 protein; FAD bindi 64.4 5.8 0.0002 40.5 4.6 24 330-353 7-30 (516)
392 7mdh_A Protein (malate dehydro 64.4 6.1 0.00021 40.4 4.7 110 331-454 32-166 (375)
393 3ihg_A RDME; flavoenzyme, anth 64.4 4.9 0.00017 41.3 4.1 34 331-376 5-38 (535)
394 2v3a_A Rubredoxin reductase; a 64.3 4.9 0.00017 39.3 3.9 35 331-375 4-38 (384)
395 3o0h_A Glutathione reductase; 64.3 6 0.00021 40.2 4.7 33 331-375 26-58 (484)
396 3e1t_A Halogenase; flavoprotei 64.1 4.4 0.00015 41.6 3.7 35 330-376 6-40 (512)
397 2yy7_A L-threonine dehydrogena 63.9 5.7 0.0002 36.8 4.1 97 332-444 3-116 (312)
398 2qcu_A Aerobic glycerol-3-phos 63.9 5.6 0.00019 40.7 4.4 34 331-376 3-36 (501)
399 1s3e_A Amine oxidase [flavin-c 63.7 6.1 0.00021 40.2 4.6 36 331-378 4-39 (520)
400 3cmm_A Ubiquitin-activating en 63.6 5.8 0.0002 45.5 4.8 38 327-375 23-60 (1015)
401 4gde_A UDP-galactopyranose mut 63.4 6.6 0.00023 39.2 4.7 23 331-353 10-32 (513)
402 2zcu_A Uncharacterized oxidore 63.3 5.2 0.00018 36.6 3.7 94 333-445 1-103 (286)
403 2e1m_A L-glutamate oxidase; L- 63.3 6.9 0.00024 39.5 4.9 35 329-375 42-76 (376)
404 3g3e_A D-amino-acid oxidase; F 63.2 6.2 0.00021 37.6 4.3 38 333-376 2-39 (351)
405 3i6d_A Protoporphyrinogen oxid 63.2 6.4 0.00022 38.6 4.5 38 332-375 6-43 (470)
406 3c4n_A Uncharacterized protein 63.1 6.8 0.00023 38.7 4.7 34 332-375 37-70 (405)
407 1ojt_A Surface protein; redox- 63.0 6.2 0.00021 40.1 4.5 33 331-375 6-38 (482)
408 2z2v_A Hypothetical protein PH 63.0 1.8 6.2E-05 43.4 0.5 92 330-447 15-109 (365)
409 3lad_A Dihydrolipoamide dehydr 62.8 6.7 0.00023 39.5 4.7 33 331-375 3-35 (476)
410 3nyc_A D-arginine dehydrogenas 62.8 4.4 0.00015 38.5 3.2 34 330-376 8-41 (381)
411 2vvm_A Monoamine oxidase N; FA 62.6 6.8 0.00023 39.4 4.6 32 332-375 40-71 (495)
412 4gbj_A 6-phosphogluconate dehy 62.1 15 0.0005 35.6 6.8 90 332-448 6-99 (297)
413 1xhc_A NADH oxidase /nitrite r 62.1 4.7 0.00016 39.6 3.3 34 331-377 8-41 (367)
414 1o94_A Tmadh, trimethylamine d 62.1 6.7 0.00023 42.5 4.8 34 331-376 389-422 (729)
415 2nvu_B Maltose binding protein 62.0 4 0.00014 44.7 3.1 37 329-376 409-445 (805)
416 2i0z_A NAD(FAD)-utilizing dehy 62.0 6 0.00021 39.8 4.2 33 332-376 27-59 (447)
417 2yg5_A Putrescine oxidase; oxi 62.0 6.8 0.00023 38.7 4.5 35 330-376 4-38 (453)
418 4a2c_A Galactitol-1-phosphate 61.8 19 0.00066 34.4 7.6 56 307-374 138-193 (346)
419 1vl0_A DTDP-4-dehydrorhamnose 61.8 7.4 0.00025 35.9 4.5 88 328-446 9-113 (292)
420 2gqf_A Hypothetical protein HI 61.8 5.6 0.00019 39.8 3.9 34 331-376 4-37 (401)
421 1xq6_A Unknown protein; struct 61.8 8.8 0.0003 34.1 4.8 99 330-445 3-132 (253)
422 2dkn_A 3-alpha-hydroxysteroid 61.5 11 0.00037 33.7 5.4 68 333-422 3-73 (255)
423 4eez_A Alcohol dehydrogenase 1 61.4 18 0.00063 34.6 7.4 47 316-374 150-196 (348)
424 3lov_A Protoporphyrinogen oxid 61.4 11 0.00036 37.6 5.8 36 331-376 4-39 (475)
425 3st7_A Capsular polysaccharide 61.4 20 0.00068 34.5 7.6 77 333-444 2-92 (369)
426 3atr_A Conserved archaeal prot 61.4 3.6 0.00012 41.3 2.4 34 331-376 6-39 (453)
427 2cdu_A NADPH oxidase; flavoenz 61.4 7.3 0.00025 39.0 4.6 34 333-376 2-35 (452)
428 1cjc_A Protein (adrenodoxin re 61.3 8.7 0.0003 39.2 5.3 35 331-375 6-40 (460)
429 2r0c_A REBC; flavin adenine di 61.2 6.2 0.00021 41.0 4.2 33 331-375 26-58 (549)
430 1nhp_A NADH peroxidase; oxidor 61.2 7.4 0.00025 38.9 4.6 34 333-376 2-35 (447)
431 3ec7_A Putative dehydrogenase; 61.1 3.8 0.00013 40.3 2.4 96 329-443 21-116 (357)
432 2wm3_A NMRA-like family domain 61.0 3.1 0.00011 38.8 1.7 100 331-448 5-116 (299)
433 3dk9_A Grase, GR, glutathione 61.0 6.1 0.00021 39.9 4.0 35 330-376 19-53 (478)
434 3sc6_A DTDP-4-dehydrorhamnose 60.8 4.8 0.00016 37.1 3.0 84 332-446 6-106 (287)
435 3tpc_A Short chain alcohol deh 60.7 19 0.00065 33.0 7.0 36 328-375 4-40 (257)
436 3lk7_A UDP-N-acetylmuramoylala 60.6 7.5 0.00026 39.6 4.6 35 328-374 6-40 (451)
437 3m6i_A L-arabinitol 4-dehydrog 60.5 9.6 0.00033 37.0 5.2 58 305-374 155-212 (363)
438 1fec_A Trypanothione reductase 60.3 9 0.00031 39.1 5.2 32 331-373 3-34 (490)
439 3k13_A 5-methyltetrahydrofolat 60.2 21 0.00072 35.3 7.6 78 264-374 95-179 (300)
440 4dgk_A Phytoene dehydrogenase; 60.2 6.4 0.00022 39.4 4.0 22 332-353 2-23 (501)
441 1xdi_A RV3303C-LPDA; reductase 60.1 7.5 0.00026 39.6 4.5 36 332-376 3-38 (499)
442 3ruf_A WBGU; rossmann fold, UD 60.0 5.6 0.00019 37.7 3.4 99 329-444 23-149 (351)
443 2iid_A L-amino-acid oxidase; f 60.0 10 0.00035 38.1 5.4 33 331-375 33-65 (498)
444 3tpf_A Otcase, ornithine carba 59.8 62 0.0021 32.1 10.9 135 262-419 81-222 (307)
445 1rp0_A ARA6, thiazole biosynth 59.7 7.6 0.00026 36.6 4.2 36 330-376 38-73 (284)
446 2ydy_A Methionine adenosyltran 59.6 16 0.00054 34.0 6.4 91 331-445 2-109 (315)
447 2b9w_A Putative aminooxidase; 59.4 8.5 0.00029 37.6 4.6 35 330-375 5-39 (424)
448 3nks_A Protoporphyrinogen oxid 59.3 7.3 0.00025 38.6 4.2 35 332-376 3-37 (477)
449 2i76_A Hypothetical protein; N 59.2 1.6 5.4E-05 41.4 -0.7 21 332-352 3-23 (276)
450 3ko8_A NAD-dependent epimerase 59.2 30 0.001 31.9 8.2 95 332-446 1-113 (312)
451 1wly_A CAAR, 2-haloacrylate re 59.0 16 0.00056 34.9 6.5 50 314-375 129-179 (333)
452 4dvj_A Putative zinc-dependent 58.9 41 0.0014 32.9 9.5 82 330-435 171-262 (363)
453 3csu_A Protein (aspartate carb 58.8 1E+02 0.0035 30.6 12.3 129 270-421 95-231 (310)
454 1sb8_A WBPP; epimerase, 4-epim 58.7 8.7 0.0003 36.6 4.5 100 329-445 25-152 (352)
455 1y0p_A Fumarate reductase flav 58.6 9.1 0.00031 39.8 4.9 40 327-378 122-161 (571)
456 2zb4_A Prostaglandin reductase 58.5 18 0.00061 35.0 6.7 56 309-375 137-195 (357)
457 3sxp_A ADP-L-glycero-D-mannohe 58.3 17 0.00059 34.7 6.5 108 327-446 6-138 (362)
458 3n74_A 3-ketoacyl-(acyl-carrie 58.2 6.1 0.00021 36.2 3.2 77 327-422 5-94 (261)
459 3k31_A Enoyl-(acyl-carrier-pro 58.2 11 0.00038 35.7 5.1 37 327-375 26-65 (296)
460 1uzm_A 3-oxoacyl-[acyl-carrier 58.1 22 0.00074 32.5 6.9 77 326-422 10-92 (247)
461 1e3j_A NADP(H)-dependent ketos 57.9 15 0.00052 35.5 6.1 37 314-351 153-189 (352)
462 2ivd_A PPO, PPOX, protoporphyr 57.9 7 0.00024 38.9 3.8 34 331-376 16-49 (478)
463 2rgh_A Alpha-glycerophosphate 57.8 8.1 0.00028 40.6 4.4 35 331-377 32-66 (571)
464 1hxh_A 3BETA/17BETA-hydroxyste 57.7 6.1 0.00021 36.3 3.1 36 328-375 3-39 (253)
465 4dna_A Probable glutathione re 57.6 8 0.00027 38.9 4.2 33 331-375 5-37 (463)
466 1pl8_A Human sorbitol dehydrog 57.6 13 0.00044 36.2 5.5 49 314-374 156-204 (356)
467 4hkt_A Inositol 2-dehydrogenas 57.4 6.5 0.00022 37.8 3.3 89 332-443 4-92 (331)
468 4h7p_A Malate dehydrogenase; s 57.4 15 0.0005 37.0 6.0 117 328-452 21-156 (345)
469 2q2v_A Beta-D-hydroxybutyrate 57.3 8.3 0.00028 35.4 3.9 35 329-375 2-37 (255)
470 2cf5_A Atccad5, CAD, cinnamyl 57.3 23 0.00078 34.5 7.3 46 317-374 167-212 (357)
471 3oig_A Enoyl-[acyl-carrier-pro 57.2 15 0.0005 33.8 5.6 36 328-375 4-42 (266)
472 3da1_A Glycerol-3-phosphate de 57.2 7.1 0.00024 41.0 3.8 33 331-375 18-50 (561)
473 1rkx_A CDP-glucose-4,6-dehydra 57.2 16 0.00055 34.7 6.1 102 329-446 7-132 (357)
474 1ps9_A 2,4-dienoyl-COA reducta 57.1 7.9 0.00027 41.3 4.3 34 331-376 373-406 (671)
475 3uko_A Alcohol dehydrogenase c 57.0 18 0.00061 35.4 6.5 37 327-374 190-226 (378)
476 4gqa_A NAD binding oxidoreduct 56.9 7.2 0.00025 38.8 3.7 108 322-441 16-129 (412)
477 2bi7_A UDP-galactopyranose mut 56.9 9.2 0.00031 37.9 4.4 34 331-376 3-36 (384)
478 2x8g_A Thioredoxin glutathione 56.9 8.7 0.0003 40.1 4.4 33 330-374 106-138 (598)
479 1hdc_A 3-alpha, 20 beta-hydrox 56.6 8.9 0.0003 35.3 4.0 36 328-375 2-38 (254)
480 1gte_A Dihydropyrimidine dehyd 56.6 7.6 0.00026 44.0 4.2 34 331-375 187-220 (1025)
481 3cmm_A Ubiquitin-activating en 56.5 7.8 0.00027 44.4 4.3 42 328-375 422-463 (1015)
482 4b63_A L-ornithine N5 monooxyg 56.3 6.5 0.00022 40.5 3.3 21 333-353 41-61 (501)
483 1kyq_A Met8P, siroheme biosynt 56.3 6.9 0.00023 38.2 3.3 36 328-375 10-45 (274)
484 3euw_A MYO-inositol dehydrogen 56.1 6 0.0002 38.3 2.8 90 332-443 5-94 (344)
485 2jl1_A Triphenylmethane reduct 55.9 5.3 0.00018 36.7 2.4 97 333-445 2-106 (287)
486 4b7c_A Probable oxidoreductase 55.7 23 0.00077 33.9 6.9 50 313-374 132-182 (336)
487 3i1j_A Oxidoreductase, short c 55.7 23 0.00079 31.9 6.6 37 327-375 10-47 (247)
488 3tzq_B Short-chain type dehydr 55.6 9.8 0.00033 35.5 4.2 77 327-422 7-96 (271)
489 2j3h_A NADP-dependent oxidored 55.4 20 0.00067 34.4 6.4 50 313-374 138-188 (345)
490 1pn0_A Phenol 2-monooxygenase; 55.4 8.6 0.0003 41.3 4.2 38 331-375 8-45 (665)
491 3ps9_A TRNA 5-methylaminomethy 55.3 9.6 0.00033 40.6 4.5 33 332-376 273-305 (676)
492 3mz0_A Inositol 2-dehydrogenas 55.2 5.2 0.00018 38.8 2.3 93 332-443 3-95 (344)
493 1qo8_A Flavocytochrome C3 fuma 55.1 12 0.00039 39.1 5.0 37 330-378 120-156 (566)
494 3pvc_A TRNA 5-methylaminomethy 55.1 7.5 0.00026 41.6 3.7 34 331-376 264-297 (689)
495 1dlj_A UDP-glucose dehydrogena 55.1 8.9 0.0003 38.7 4.0 30 333-375 2-31 (402)
496 3ic9_A Dihydrolipoamide dehydr 55.1 7.9 0.00027 39.6 3.7 32 332-375 9-40 (492)
497 1rpn_A GDP-mannose 4,6-dehydra 54.7 21 0.00071 33.4 6.3 103 329-445 12-137 (335)
498 3hdq_A UDP-galactopyranose mut 54.6 12 0.0004 38.1 4.9 34 330-375 28-61 (397)
499 1qsg_A Enoyl-[acyl-carrier-pro 54.5 12 0.0004 34.6 4.4 35 329-375 7-44 (265)
500 3nlc_A Uncharacterized protein 54.5 6.7 0.00023 41.6 3.1 33 331-375 107-139 (549)
No 1
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=100.00 E-value=1.2e-160 Score=1264.79 Aligned_cols=405 Identities=53% Similarity=0.903 Sum_probs=398.9
Q ss_pred ccccccccCCCCCcCCCCCHHHHhhhccCCCCCCccccHHHHHHHHHHHhhcCCCchhHHHHHhhhhhhhhhhhHHHhhh
Q 012553 50 ASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLID 129 (461)
Q Consensus 50 ~~G~~~l~~p~~NKG~aFt~~ER~~l~l~GLLPp~v~t~e~Q~~R~~~~~~~~~~~l~Ky~~L~~L~~~Ne~LFY~ll~~ 129 (461)
.+|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|+|+++++++|+||+||++||++||+||||++++
T Consensus 1 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~ 80 (555)
T 1gq2_A 1 KKGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSDLDRYILLMSLQDRNEKLFYKVLTS 80 (555)
T ss_dssp CCTTHHHHCTTTCCGGGSCHHHHHHTTCTTSSCSCBCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CChhhhccCCcccCCCCCCHHHHHHCCCccCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhcCcceeeehhhHhh
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcccccchHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceeeccCCCCCCccccchh
Q 012553 130 NVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 209 (461)
Q Consensus 130 ~~ee~lpivYTPtVg~ac~~~s~i~r~p~glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~~G 209 (461)
|++|+|||+||||||++|++||+|||+|+|+|+|++|+|+++++++|||.++|+|||||||||||||||||++|||||||
T Consensus 81 ~~~e~lpivYTP~V~~ac~~~s~i~~~p~g~yis~~d~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g~~ipvG 160 (555)
T 1gq2_A 81 DIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVG 160 (555)
T ss_dssp THHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHHTSSCSCCCEEEEECSSSCGGGCCCGGGGGHHHHH
T ss_pred hHHHhcCcccCchHHHHHHHHHHHhcChhhhhcccCCHHHHHHHHhcCCCCCcEEEEEEccccccccCCCCCCccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHhhCCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCcccH
Q 012553 210 KLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA 289 (461)
Q Consensus 210 Kl~Ly~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~~lIq~EDf~~~~a 289 (461)
|++|||+||||||++|||||||+|||||+||+||+||||||+|++|++|++|+||||++|+++|||+++||||||++|||
T Consensus 161 Kl~Ly~~~aGIdP~~~lPI~LD~GTnn~~LL~DplYlG~r~~Rv~g~eyd~fvdefv~av~~~fGp~~~I~~EDf~~~~a 240 (555)
T 1gq2_A 161 KLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFANANA 240 (555)
T ss_dssp HHHHHHHTTCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCTHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHH
T ss_pred HHHHhHhccCCChhheeeeEeecCCCchhhcCCCccCCcCCCCCchHHHHHHHHHHHHHHHHhhCCCcEEeecccCCccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCceeccCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceE
Q 012553 290 FELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKI 369 (461)
Q Consensus 290 f~iL~ryr~~~~~FnDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i 369 (461)
|+||+|||++||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+.+|+++ |+|+|||++||
T Consensus 241 f~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAg~gia~ll~~~~~~~-G~~~eeA~~~i 319 (555)
T 1gq2_A 241 FRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVMAMQKE-GVSKEEAIKRI 319 (555)
T ss_dssp HHHHHHHTTTSEEEETTTHHHHHHHHHHHHHHHHHHTSCGGGCCEEEECCSHHHHHHHHHHHHHHHHH-TCCHHHHHTTE
T ss_pred HHHHHHHhccCCEecCccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHc-CCChHHHhCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999885 99999999999
Q ss_pred EEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcCCCC
Q 012553 370 CLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLWLIR 449 (461)
Q Consensus 370 ~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Lsnp~ 449 (461)
||||++|||+++|.+ |+++|++||++.++.++|+|||+++|||||||+|+++|+||||||++|+++|+||||||||||+
T Consensus 320 ~~~D~~Gli~~~r~~-l~~~k~~~A~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt 398 (555)
T 1gq2_A 320 WMVDSKGLIVKGRAS-LTPEKEHFAHEHCEMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSNPT 398 (555)
T ss_dssp EEEETTEECBTTCSS-CCTTGGGGCBSCCCCCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECCSSG
T ss_pred EEEECCCeeeCCCCC-chHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCCC
Confidence 999999999999965 9999999999877778999999999999999999999999999999999999999999999999
Q ss_pred chhhhhh
Q 012553 450 KFNFCSL 456 (461)
Q Consensus 450 ~~~~~~~ 456 (461)
.+.||.-
T Consensus 399 ~~aE~~p 405 (555)
T 1gq2_A 399 SKAECTA 405 (555)
T ss_dssp GGCSSCH
T ss_pred CccCcCH
Confidence 9999963
No 2
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=100.00 E-value=2.7e-160 Score=1265.16 Aligned_cols=406 Identities=50% Similarity=0.890 Sum_probs=399.0
Q ss_pred ccccccccCCCCCcCCCCCHHHHhhhccCCCCCCccccHHHHHHHHHHHhhcCCCchhHHHHHhhhhhhhhhhhHHHhhh
Q 012553 50 ASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLID 129 (461)
Q Consensus 50 ~~G~~~l~~p~~NKG~aFt~~ER~~l~l~GLLPp~v~t~e~Q~~R~~~~~~~~~~~l~Ky~~L~~L~~~Ne~LFY~ll~~ 129 (461)
.+|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|+|+++++++|+||+||++||++||+||||++++
T Consensus 3 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~ 82 (564)
T 1pj3_A 3 EKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKYIYIMGIQERNEKLFYRILQD 82 (564)
T ss_dssp CCSTHHHHSTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHCCSHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CchHHHhCCCcccCCCCCCHHHHHhCCCCcCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhhcccceeehhhhhh
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcccccchHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceeeccCCCCCCccccchh
Q 012553 130 NVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 209 (461)
Q Consensus 130 ~~ee~lpivYTPtVg~ac~~~s~i~r~p~glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~~G 209 (461)
|++|+|||+||||||++|++||+|||+|+|+|+|++|+|+|+++|+|||.++|+|||||||||||||||||++||+||||
T Consensus 83 ~~~e~lpivYTP~Vg~ac~~~s~i~~~p~g~ylsi~d~~~i~~~l~n~~~~~v~v~VVTDG~~ILGLGD~G~~gm~ipvG 162 (564)
T 1pj3_A 83 DIESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVG 162 (564)
T ss_dssp CHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHTTCSCSCCCEEEEECSSSCTTSCCCGGGGGHHHHH
T ss_pred CHHHhCCeeeCccHHHHHHHHHHHhcCcccccccccCHHHHHHHHHhCCCCCceEEEEEcccccccCCCCCCCcccceeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHhhCCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCcccH
Q 012553 210 KLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA 289 (461)
Q Consensus 210 Kl~Ly~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~~lIq~EDf~~~~a 289 (461)
|++|||+||||||++|||||||+|||||+||+||+||||||+|++|++|++|+||||++|+++|||+++||||||++|||
T Consensus 163 Kl~Ly~~~aGIdP~~~lPI~lDvgTnn~~LL~DPlYlG~r~~Rv~g~eYd~fvdefv~av~~~fG~~~~I~~EDf~~~~a 242 (564)
T 1pj3_A 163 KLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQFEDFGNHNA 242 (564)
T ss_dssp HHHHHHHHHCCCGGGEEEEEEESCCCCTTGGGCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHH
T ss_pred HHHHHHhccCCChhheeeeEeecCcCchhhccCCcccCcCCCCCchhhHHHHHHHHHHHHHHHcCCCcEEeehhcCCccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCceeccCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceE
Q 012553 290 FELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKI 369 (461)
Q Consensus 290 f~iL~ryr~~~~~FnDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i 369 (461)
|+||+|||++||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+.+|+++ |+|+|||++||
T Consensus 243 f~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~-Gl~~eeA~~~i 321 (564)
T 1pj3_A 243 FRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAALGIANLIVMSMVEN-GLSEQEAQKKI 321 (564)
T ss_dssp HHHHHHHTTTSSEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHHT-TCCHHHHHHTE
T ss_pred HHHHHHhccCCCEeCCCCchHHHHHHHHHHHHHHHhCCcHhHcEEEEeCCCHHHHHHHHHHHHHHHHc-CCChHHhhCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999885 99999999999
Q ss_pred EEEcCCCccccCCcCCCChhhhhhccccCCC--CCHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcCC
Q 012553 370 CLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLWL 447 (461)
Q Consensus 370 ~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~--~~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Lsn 447 (461)
||||++|||+++|.++|+++|++||++.++. ++|+|||+++|||||||+|+++|+||||||++|+++|+|||||||||
T Consensus 322 ~~~D~~Gli~~~r~~~l~~~k~~~A~~~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSN 401 (564)
T 1pj3_A 322 WMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSN 401 (564)
T ss_dssp EEEETTEECBTTCSSCCCTTTGGGCBCCCSSCCSSHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCEEEECCS
T ss_pred EEEeCCCeEECCCcccchHHHHHHHHhcCccccCCHHHHHhhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECCC
Confidence 9999999999999435999999999987766 79999999999999999999999999999999999999999999999
Q ss_pred CCchhhhhh
Q 012553 448 IRKFNFCSL 456 (461)
Q Consensus 448 p~~~~~~~~ 456 (461)
|+.+.||.-
T Consensus 402 Pt~~aE~~p 410 (564)
T 1pj3_A 402 PTAQAECTA 410 (564)
T ss_dssp SGGGCSCCH
T ss_pred CCCccCcCH
Confidence 999999963
No 3
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=100.00 E-value=9.2e-160 Score=1264.95 Aligned_cols=409 Identities=46% Similarity=0.818 Sum_probs=401.8
Q ss_pred ccccccccccccCCCCCcCCCCCHHHHhhhccCCCCCCccccHHHHHHHHHHHhhcCCCchhHHHHHhhhhhhhhhhhHH
Q 012553 46 TISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYK 125 (461)
Q Consensus 46 ~~~~~~G~~~l~~p~~NKG~aFt~~ER~~l~l~GLLPp~v~t~e~Q~~R~~~~~~~~~~~l~Ky~~L~~L~~~Ne~LFY~ 125 (461)
..+..+|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|+|+++++++|+||+||++||++||+||||
T Consensus 33 ~~~~~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfyr 112 (605)
T 1o0s_A 33 VTPKKRSAELLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLREQPNDLARYIQLDGLQDRNEKLFYR 112 (605)
T ss_dssp CCCSCCHHHHHTCTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHCHHHHHH
T ss_pred cccCcchHHHhCCCcccCCCCCCHHHHHHCCCCcCCCCCcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHhhcccchhhhh
Confidence 45568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcccccCCcccccchHHHHHHHhhhhcCCCcccccccCc--chHHHHHhcCCCCCeeEEEEecCceeeccCCCCCCc
Q 012553 126 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEK--GKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQG 203 (461)
Q Consensus 126 ll~~~~ee~lpivYTPtVg~ac~~~s~i~r~p~glyis~~d~--g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~G 203 (461)
++++|++|+|||+||||||++|++||+|||+|+|+|+|++|+ |+++++++|||.++|+|||||||||||||||||++|
T Consensus 113 ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~g~yis~~d~~~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g 192 (605)
T 1o0s_A 113 VVCDHVKELMPIVYTPTVGLACQNFGYIYRKPKGLYITINDNSVSKIYQILSNWHEEDVRAIVVTDGERILGLGDLGAYG 192 (605)
T ss_dssp HHHHTHHHHHHHHSTTHHHHHHHHHCSCCCCCCSEEEEGGGCSHHHHHHHHTTSSCSCCCEEEEECSSCBTTTBCCGGGG
T ss_pred hhhhCHHHhCCeeeCccHHHHHHHHHHHhcChHhhhccccCcccchHHHHHhcCCCCCceEEEEEccccceecCCCCCCc
Confidence 999999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred cccchhhhhHHHhhCCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCCeeeeeec
Q 012553 204 MGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFED 283 (461)
Q Consensus 204 mgI~~GKl~Ly~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~~lIq~ED 283 (461)
|||||||++|||+||||||++|||||||+|||||+||+||+||||||+|++|++|++|+||||++|+++|||+++|||||
T Consensus 193 ~~ipvGKl~Ly~~~aGIdP~~~lPI~LDvGTnne~LL~DPlYlG~r~~Rv~g~~Yd~fvdefv~av~~~fGp~~~I~~ED 272 (605)
T 1o0s_A 193 IGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDYDTLLDNFMKACTKKYGQKTLIQFED 272 (605)
T ss_dssp GHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CcceeeHHHHHHhccCCChhheeeeEeccCCChhhhccCCcccCcCCCCCChHHHHHHHHHHHHHHHHHhCCCcEeeHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccHHHHHHHHcCCCceeccCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChh
Q 012553 284 FANHNAFELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVE 363 (461)
Q Consensus 284 f~~~~af~iL~ryr~~~~~FnDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~e 363 (461)
|++||||+||+|||++||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+.+|+++ |+|+|
T Consensus 273 f~~p~af~il~ryr~~ipvFnDDiqGTA~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~-Gl~~e 351 (605)
T 1o0s_A 273 FANPNAFRLLDKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMIVHQMQNE-GISKE 351 (605)
T ss_dssp CCHHHHHHHHHHHTTTSEEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHTT-TCCHH
T ss_pred cCCccHHHHHHHhccCCCeeCcccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHc-CCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999875 99999
Q ss_pred hccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEE
Q 012553 364 ETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQA 443 (461)
Q Consensus 364 eA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 443 (461)
||++||||||++|||+++|.+ |+++|++||++.++.++|+|||+++|||||||+|+++|+||||||++||++|+|||||
T Consensus 352 eA~~~i~~vD~~Gli~~~r~~-l~~~k~~~A~~~~~~~~L~eav~~vkpdVlIG~S~~~g~ft~evv~~Ma~~~~~PIIF 430 (605)
T 1o0s_A 352 EACNRIYLMDIDGLVTKNRKE-MNPRHVQFAKDMPETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIF 430 (605)
T ss_dssp HHHHTEEEEETTEECBTTCSS-CCGGGTTTCBSSCCCCCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEE
T ss_pred hhhCeEEEEECCCceeCCCCC-chHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEE
Confidence 999999999999999999965 9999999999877778999999999999999999999999999999999999999999
Q ss_pred EcCCCCchhhhhh
Q 012553 444 LLWLIRKFNFCSL 456 (461)
Q Consensus 444 ~Lsnp~~~~~~~~ 456 (461)
|||||+.+.||.-
T Consensus 431 aLSNPt~~aE~~p 443 (605)
T 1o0s_A 431 ALSNPTSKAECTA 443 (605)
T ss_dssp ECCSSGGGCSSCH
T ss_pred ECCCCCCCcCcCH
Confidence 9999999999963
No 4
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=100.00 E-value=5.4e-89 Score=709.14 Aligned_cols=266 Identities=30% Similarity=0.374 Sum_probs=235.2
Q ss_pred cccCCcccccchHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceeeccCCCCC-Cccccchhh
Q 012553 132 EELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGC-QGMGIPVGK 210 (461)
Q Consensus 132 ee~lpivYTPtVg~ac~~~s~i~r~p~glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~-~GmgI~~GK 210 (461)
.+.|||+||||||++|++|+ +|++++++++.+| ++|||||||||||||||||+ +||||||||
T Consensus 58 ~~dLslaYTPgVa~~c~~i~-------------~dp~~~~~yt~kg----n~VaVVTDG~aILGLGDiG~~agmpImeGK 120 (487)
T 3nv9_A 58 FNWFNAYYTPGVSRISTNIR-------------DNNDSSLFYSLRG----NFVGVVSDSTRVLGDGDVTPPGGLGVMEGK 120 (487)
T ss_dssp GGGHHHHSTTTHHHHHHHHH-------------HCGGGHHHHSGGG----GEEEEEECSSSBGGGBCCCGGGGHHHHHHH
T ss_pred HHHCeeeeCcchHHHHHHHH-------------hChHHHhhhcccC----CEEEEEEcCceeeeccccccccCCchhhhH
Confidence 36699999999999999985 3566666655544 69999999999999999999 589999999
Q ss_pred hhHHHhhCCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCcccHH
Q 012553 211 LALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF 290 (461)
Q Consensus 211 l~Ly~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~~lIq~EDf~~~~af 290 (461)
++|||+||||| |||||||+||+| +++|| |+| .|||+++.++||+ ||||||++||||
T Consensus 121 l~Lyk~~aGId---~lPI~LD~gt~~--~~~d~---------------def-ve~v~~~~P~fG~---InlEDf~ap~af 176 (487)
T 3nv9_A 121 ALLMKYLGGID---AVPICIDSKNKE--GKNDP---------------DAV-IEFVQRIQHTFGA---INLEDISQPNCY 176 (487)
T ss_dssp HHHHHHHHCCE---EEEEECCCBCTT--SCBCH---------------HHH-HHHHHHHGGGCSE---EEECSCCTTHHH
T ss_pred HHHHHhcCCCc---eeeeEEeCCCcc--ccCCH---------------HHH-HHHHHHhCCCCCe---ecHhhcCCchHH
Confidence 99999999999 999999999754 45664 343 3577777777777 999999999999
Q ss_pred HHHHHHcC--CCceeccCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccce
Q 012553 291 ELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKK 368 (461)
Q Consensus 291 ~iL~ryr~--~~~~FnDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~ 368 (461)
+||+|||+ +||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+. .|+|+ +|
T Consensus 177 ~il~ryr~~~~ipvFnDD~qGTA~V~lAgllnAlki~gk~l~d~riV~~GAGaAGigia~ll~~-----~G~~~----~~ 247 (487)
T 3nv9_A 177 KILDVLRESCDIPVWHDDQQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSSNTTCLRLIVT-----AGADP----KK 247 (487)
T ss_dssp HHHHHHHHHCSSCEEETTTHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSHHHHHHHHHHHH-----TTCCG----GG
T ss_pred HHHHHHHhhccCCccccccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHH-----cCCCc----cc
Confidence 99999998 899999999999999999999999999999999999999999999999999975 49975 89
Q ss_pred EEEEcCCCccccCCcCCC-----ChhhhhhccccC--CCCCHHHhhcccCCcEEEeccCC-CCCCCHHHHHHHhcCCCCc
Q 012553 369 ICLVDSKGLIVSSRKDSL-----QHFKKPWAHEHE--PVNNLLDAVKVIKPTILIGSSGV-GRTFTKEVIEAMASFNEVV 440 (461)
Q Consensus 369 i~lvDs~GLi~~~R~~~L-----~~~k~~fA~~~~--~~~~L~eaV~~vkptvLIG~S~~-~g~Ft~evv~~Ma~~~erP 440 (461)
|||||++|||+++|.+ | .++|.+||+..+ ..++|+|||++ +|||||+|++ +|+||+|||++|+ +||
T Consensus 248 i~l~D~~Gli~~~R~~-l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~--adVlIG~S~~~pg~ft~e~V~~Ma---~~P 321 (487)
T 3nv9_A 248 IVMFDSKGSLHNGRED-IKKDTRFYRKWEICETTNPSKFGSIAEACVG--ADVLISLSTPGPGVVKAEWIKSMG---EKP 321 (487)
T ss_dssp EEEEETTEECCTTCHH-HHHCGGGHHHHHHHHHSCTTCCCSHHHHHTT--CSEEEECCCSSCCCCCHHHHHTSC---SSC
T ss_pred EEEEeccccccCCcch-hhhhcccHHHHHHHHhcccccCCCHHHHHhc--CCEEEEecccCCCCCCHHHHHhhc---CCC
Confidence 9999999999999964 6 346778888643 46799999998 7999999976 7899999999997 599
Q ss_pred EEEEcCCCCchhhhh
Q 012553 441 FQALLWLIRKFNFCS 455 (461)
Q Consensus 441 IIF~Lsnp~~~~~~~ 455 (461)
||||||||+. ||.
T Consensus 322 IIFaLSNPtp--Ei~ 334 (487)
T 3nv9_A 322 IVFCCANPVP--EIY 334 (487)
T ss_dssp EEEECCSSSC--SSC
T ss_pred EEEECCCCCc--cCC
Confidence 9999999996 886
No 5
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=100.00 E-value=5.2e-83 Score=655.92 Aligned_cols=267 Identities=29% Similarity=0.373 Sum_probs=240.2
Q ss_pred hhhHHHhhhcccccCCcccccchHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceeeccCCCC
Q 012553 121 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLG 200 (461)
Q Consensus 121 ~LFY~ll~~~~ee~lpivYTPtVg~ac~~~s~i~r~p~glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG 200 (461)
.+++++.+++. |+|||+||||||++|++|+ ++|.++| +||.++++|+|||||||||||||+|
T Consensus 23 ~~~~~~~~~~~-~~l~i~YtP~V~~~c~~i~---~~p~~v~--------------~~t~~~~~V~VvTdG~~iLGLGD~G 84 (398)
T 2a9f_A 23 EVQPKVDIKTK-HDLSIAYTPGVASVSSAIA---KDKTLAY--------------DLTTKKNTVAVISDGTAVLGLGDIG 84 (398)
T ss_dssp EEEESSCCSSH-HHHHHHSTTTTHHHHHHHH---HCGGGHH--------------HHSGGGTEEEEEECSSSCTTSCCCC
T ss_pred EEEEecccCCH-HHCeEEECchHHHHHHHHH---hCHHHHH--------------HhcccCCEEEEEECCccccCCCCcc
Confidence 35566667776 6689999999999999976 4555444 6899999999999999999999999
Q ss_pred CC-ccccchhhhhHHHhhCCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCC-ee
Q 012553 201 CQ-GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEK-VL 278 (461)
Q Consensus 201 ~~-GmgI~~GKl~Ly~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~-~l 278 (461)
++ |||||+||++|||+||||| |+|||||+|| +||||++|+..| |. ..
T Consensus 85 ~~aG~pI~eGK~~Lf~~~agid---~~pi~Ldv~~---------------------------~dEfv~~v~~~~-p~F~~ 133 (398)
T 2a9f_A 85 PEAAMPVMEGKAALFKAFAGVD---AIPIVLDTKD---------------------------TEEIISIVKALA-PTFGG 133 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCE---EEEEECCCCC---------------------------HHHHHHHHHHHG-GGCSE
T ss_pred cccCCcchhCHHHHHHhccCCc---eeeeEeCCCC---------------------------HHHHHHHHHHcC-CceeE
Confidence 98 8999999999999999999 9999999996 799999999988 77 78
Q ss_pred eeeecCCcccHHHHHHHHcC--CCceeccCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHH
Q 012553 279 IQFEDFANHNAFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (461)
Q Consensus 279 Iq~EDf~~~~af~iL~ryr~--~~~~FnDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~ 356 (461)
||||||++||||++|+|||+ +||||||||||||+|++||++||+|++|++++|+||||+|||+||+|||++++.+
T Consensus 134 I~lED~~~p~~f~il~~~r~~~~ipvf~DDiqGTa~V~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~--- 210 (398)
T 2a9f_A 134 INLEDISAPRCFEIEQRLIKECHIPVFHDDQHGTAIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAA--- 210 (398)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHH---
T ss_pred eccccCCChHHHHHHHHhhhcCCcceecchhhhHHHHHHHHHHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHc---
Confidence 99999999999999999997 5999999999999999999999999999999999999999999999999999874
Q ss_pred hcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCC---CCCHHHhhcccCCcEEEeccCCCCCCCHHHHHHH
Q 012553 357 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP---VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAM 433 (461)
Q Consensus 357 ~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~---~~~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~M 433 (461)
|+ ++||++|++|||+++|.+.|+++|++||++.+. ..+|+|+|++ +|||||+|+ +|+||+|||++|
T Consensus 211 --Ga------~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~--ADV~IG~Sa-pgl~T~EmVk~M 279 (398)
T 2a9f_A 211 --GA------TKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEG--ADIFIGVSA-PGVLKAEWISKM 279 (398)
T ss_dssp --TC------CEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHT--TCSEEECCS-TTCCCHHHHHTS
T ss_pred --CC------CeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhcc--CCEEEecCC-CCCCCHHHHHhh
Confidence 63 799999999999999933599999999997543 4689999998 899999999 889999999999
Q ss_pred hcCCCCcEEEEcCCCCchhhhh
Q 012553 434 ASFNEVVFQALLWLIRKFNFCS 455 (461)
Q Consensus 434 a~~~erPIIF~Lsnp~~~~~~~ 455 (461)
++ +|||||||||+ -||.
T Consensus 280 a~---~pIIfalsNPt--~E~~ 296 (398)
T 2a9f_A 280 AA---RPVIFAMANPI--PEIY 296 (398)
T ss_dssp CS---SCEEEECCSSS--CSSC
T ss_pred CC---CCEEEECCCCC--ccCC
Confidence 95 99999999999 5886
No 6
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=100.00 E-value=1.6e-79 Score=628.89 Aligned_cols=267 Identities=28% Similarity=0.385 Sum_probs=245.4
Q ss_pred hhhHHHhhhcccccCCcccccchHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceeeccCCCC
Q 012553 121 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLG 200 (461)
Q Consensus 121 ~LFY~ll~~~~ee~lpivYTPtVg~ac~~~s~i~r~p~glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG 200 (461)
..++++.+++.|+ |||+||||||++|++|+ ++|.++| +||.++++|+|||||||||||||+|
T Consensus 27 ~~~~~~~~~~~~~-l~i~YtP~V~~~c~~~~---~~p~~v~--------------~~t~~~~~V~VvTdg~~vLGlGD~G 88 (388)
T 1vl6_A 27 RTALPVEKVDRET-LSLLYTPGVADVARACA---EDPEKTY--------------VYTSRWNTVAVVSDGSAVLGLGNIG 88 (388)
T ss_dssp EEECSCSCCCHHH-HHHHSTTTHHHHHHHHH---HCGGGHH--------------HHSGGGGEEEEEECSTTBTTTBSCC
T ss_pred EEEEeeecCCHHH-CeEEECchHHHHHHHHH---hCHHHHH--------------hhcccCCeEEEEECCccccCCCccc
Confidence 4678888888855 89999999999999976 5665544 6899999999999999999999999
Q ss_pred CC-ccccchhhhhHHHhhCCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCC-ee
Q 012553 201 CQ-GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEK-VL 278 (461)
Q Consensus 201 ~~-GmgI~~GKl~Ly~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~-~l 278 (461)
++ |||||+||++|||+||||| ++|||||+|| +||||++|++.| |. ..
T Consensus 89 ~~ag~pI~egK~~Lf~~~agid---~~pi~ldv~~---------------------------~dE~v~~vk~~~-p~f~~ 137 (388)
T 1vl6_A 89 PYGALPVMEGKAFLFKAFADID---AFPICLSESE---------------------------EEKIISIVKSLE-PSFGG 137 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCE---EEEEECSCCC---------------------------HHHHHHHHHHTG-GGCSE
T ss_pred cccCCcchhCHHHHHHhccCCc---eEeEEeCCCC---------------------------HHHHHHHHHHcC-CcceE
Confidence 98 8999999999999999999 9999999996 799999999988 66 78
Q ss_pred eeeecCCcccHHHHHHHHcC--CCceeccCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHH
Q 012553 279 IQFEDFANHNAFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (461)
Q Consensus 279 Iq~EDf~~~~af~iL~ryr~--~~~~FnDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~ 356 (461)
||||||++||||++|+|||+ +||||||||||||+|++||++||+|++|++++|+||||+|||+||++||++++..
T Consensus 138 i~lED~~~p~af~il~r~r~~~~Ipvf~DDiqGTasV~lAal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~--- 214 (388)
T 1vl6_A 138 INLEDIGAPKCFRILQRLSEEMNIPVFHDDQQGTAVVVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDL--- 214 (388)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHH---
T ss_pred eCHhhcCCHHHHHHHHHhhhhcCcceeccccccHHHHHHHHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhC---
Confidence 99999999999999999997 6999999999999999999999999999999999999999999999999999874
Q ss_pred hcCCChhhccceEEEEcCCCccccCCcCC-CChhhhhhccccCC---CCCHHHhhcccCCcEEEeccCCCCCCCHHHHHH
Q 012553 357 QTKAPVEETRKKICLVDSKGLIVSSRKDS-LQHFKKPWAHEHEP---VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEA 432 (461)
Q Consensus 357 ~~Gls~eeA~~~i~lvDs~GLi~~~R~~~-L~~~k~~fA~~~~~---~~~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~ 432 (461)
| .++||++|++|||+.+|.+. |+++|++||++... ..+|.|+|++ +|+|||+|+ +|+||+|+|++
T Consensus 215 --G------~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~--ADVlIG~Sa-p~l~t~emVk~ 283 (388)
T 1vl6_A 215 --G------VKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEG--ADFFIGVSR-GNILKPEWIKK 283 (388)
T ss_dssp --T------CCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTT--CSEEEECSC-SSCSCHHHHTT
T ss_pred --C------CCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHcc--CCEEEEeCC-CCccCHHHHHh
Confidence 6 47999999999999999643 99999999997543 4689999998 899999999 78999999999
Q ss_pred HhcCCCCcEEEEcCCCCchhhhh
Q 012553 433 MASFNEVVFQALLWLIRKFNFCS 455 (461)
Q Consensus 433 Ma~~~erPIIF~Lsnp~~~~~~~ 455 (461)
|++ +||||+||||+ -||.
T Consensus 284 Ma~---~pIIfalSNPt--~E~~ 301 (388)
T 1vl6_A 284 MSR---KPVIFALANPV--PEID 301 (388)
T ss_dssp SCS---SCEEEECCSSS--CSSC
T ss_pred cCC---CCEEEEcCCCC--CCCC
Confidence 985 99999999999 5886
No 7
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=100.00 E-value=3.5e-58 Score=477.94 Aligned_cols=263 Identities=29% Similarity=0.454 Sum_probs=231.5
Q ss_pred hhHHHhhhcccccCCcccccchHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceeeccCCCCC
Q 012553 122 LFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGC 201 (461)
Q Consensus 122 LFY~ll~~~~ee~lpivYTPtVg~ac~~~s~i~r~p~glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~ 201 (461)
.++++.+++. |+|||+||||||++|++|++ |++++++ ||.++|+|+|||||+|||||||+|.
T Consensus 22 ~~~~~~~~~~-~~l~~~YtP~v~~~c~~~~~-------------~~~~~~~----~~~~~~~v~vvtdgt~ilGlG~iG~ 83 (439)
T 2dvm_A 22 VIPKVSLESR-EELTLAYTPGVAEPCKEIAR-------------DPGKVYE----YTSKGNLVAVVSDGSRILGLGNIGP 83 (439)
T ss_dssp EEESSCCCSH-HHHHHHSTTTTHHHHHHHHH-------------CGGGHHH----HSSGGGEEEEEECSTTBTTTBCCCH
T ss_pred EEEeeccCCH-HHCeeEECchhHHHHHHHHH-------------CHHHHHh----hcccCcEEEEEECCCeEecccceec
Confidence 4566677776 56899999999999999873 6666654 8999999999999999999999999
Q ss_pred C-ccccchhhhhHHHhhCCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCC-eee
Q 012553 202 Q-GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEK-VLI 279 (461)
Q Consensus 202 ~-GmgI~~GKl~Ly~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~-~lI 279 (461)
+ ++|+|+||++||++||||| ++|+++|+.+ +|+|+++|+..+ |+ ..|
T Consensus 84 hS~sPvmh~ka~lf~~~gGid---~~yi~ldv~d---------------------------~de~~~~v~~l~-~~f~Gi 132 (439)
T 2dvm_A 84 LAGLPVMEGKALLFKRFGGVD---AFPIMIKEQE---------------------------PNKFIDIVKAIA-PTFGGI 132 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHCCE---EEEEECSCCS---------------------------HHHHHHHHHHTG-GGCSEE
T ss_pred cccCHHHHHHHHHHHHhCCCC---CeeeeeecCC---------------------------HHHHHHHHHHhC-ccCcEE
Confidence 7 7999999999999999999 9999999931 577777777655 33 459
Q ss_pred eeecCCcccHHHHHHHHcC--CCceeccCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHh
Q 012553 280 QFEDFANHNAFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQ 357 (461)
Q Consensus 280 q~EDf~~~~af~iL~ryr~--~~~~FnDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~ 357 (461)
|||||+.|+||+++++|++ ++||||||+||||++.++|+++|++..|++++++|+||+|||+||.+|+.+|...
T Consensus 133 nvED~T~P~k~~il~~l~~avNt~vf~dD~~gtgntd~aG~~~AL~~~g~~l~~~rvlvlGAGgAg~aia~~L~~~---- 208 (439)
T 2dvm_A 133 NLEDIASPKCFYILERLREELDIPVFHDDQQGTAAVVLAGLLNALKVVGKKISEITLALFGAGAAGFATLRILTEA---- 208 (439)
T ss_dssp EECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEECCSHHHHHHHHHHHHT----
T ss_pred EEEeCCCchHHHHHHHHHHhcCEEEEeCCCcEEeehHHHHHHHHHHHhCCCccCCEEEEECccHHHHHHHHHHHHc----
Confidence 9999999999999999986 7999999999999999999999999999999999999999999999999999763
Q ss_pred cCCChhhccceEEEEc----CCCccccCCcCC---CChhhhhhccccC---CCCCHHHhhcccCCcEEEeccCCC-CCCC
Q 012553 358 TKAPVEETRKKICLVD----SKGLIVSSRKDS---LQHFKKPWAHEHE---PVNNLLDAVKVIKPTILIGSSGVG-RTFT 426 (461)
Q Consensus 358 ~Gls~eeA~~~i~lvD----s~GLi~~~R~~~---L~~~k~~fA~~~~---~~~~L~eaV~~vkptvLIG~S~~~-g~Ft 426 (461)
|++ +++||++| ++||++++ +. |.+++++|++... ...+|.|+++. +|+|||+|+++ |+|+
T Consensus 209 -G~~----~~~I~vvd~~~~R~G~~~~a--~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l~~--aDVlInaT~~~~G~~~ 279 (439)
T 2dvm_A 209 -GVK----PENVRVVELVNGKPRILTSD--LDLEKLFPYRGWLLKKTNGENIEGGPQEALKD--ADVLISFTRPGPGVIK 279 (439)
T ss_dssp -TCC----GGGEEEEEEETTEEEECCTT--SCHHHHSTTCHHHHTTSCTTCCCSSHHHHHTT--CSEEEECSCCCSSSSC
T ss_pred -CCC----cCeEEEEEccCCCcCccccc--cchhHHHHHHHHHhhccccccccccHHHHhcc--CCEEEEcCCCccCCCC
Confidence 765 37999999 99999887 24 7788888887533 24689999987 89999999985 8999
Q ss_pred HHHHHHHhcCCCCcEEEEcCCCC
Q 012553 427 KEVIEAMASFNEVVFQALLWLIR 449 (461)
Q Consensus 427 ~evv~~Ma~~~erPIIF~Lsnp~ 449 (461)
+++++.|+ ++||||+|+||+
T Consensus 280 ~e~v~~m~---~~~iVfDLynP~ 299 (439)
T 2dvm_A 280 PQWIEKMN---EDAIVFPLANPV 299 (439)
T ss_dssp HHHHTTSC---TTCEEEECCSSS
T ss_pred hHHHHhcC---CCCEEEECCCCC
Confidence 99999887 599999999998
No 8
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.83 E-value=3.4e-08 Score=103.01 Aligned_cols=161 Identities=11% Similarity=0.150 Sum_probs=120.0
Q ss_pred CChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCcccHHHHH---------------------HHHc-------CCCcee-
Q 012553 253 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELL---------------------AKYG-------TTHLVF- 303 (461)
Q Consensus 253 ~~g~~Y~~~idefv~av~~~fGp~~lIq~EDf~~~~af~iL---------------------~ryr-------~~~~~F- 303 (461)
.+-|||...+++.+.+ ..++|+.+| |-+..=...+- .||+ ..+|+|
T Consensus 112 ~~~~ey~~~~~~~~~~--~~~~p~~il---DdGgdl~~~~h~~~~~~~~~i~G~~EeTttGv~rl~~~~~~g~L~~Pvi~ 186 (435)
T 3gvp_A 112 ESEDDFWWCIDRCVNV--EGWQPNMIL---DDGGDLTHWIYKKYPNMFKKIKGIVEESVTGVHRLYQLSKAGKLCVPAMN 186 (435)
T ss_dssp CCHHHHHHHHHHHHCB--TTBCCSEEE---ESSSHHHHHHHHHCHHHHHTCCEEEECCHHHHHHHTCC--CCCCCSCEEE
T ss_pred CCHHHHHHHHHHHHhc--cCCCCcEEE---ecchHHHHHHHHHhHHHHhhcceeEeccchhHHHHHHHHHcCCCCCCEEE
Confidence 4667888888876642 346687666 54543322221 3443 369999
Q ss_pred ---------ccCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcC
Q 012553 304 ---------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (461)
Q Consensus 304 ---------nDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs 374 (461)
+|+++||+.++++|+.++ ++..+.+.+++|+|+|..|.++|+.+... |. +++.+|.
T Consensus 187 vnds~tK~~fDn~yGt~~s~~~gi~ra---t~~~L~GktV~ViG~G~IGk~vA~~Lra~-----Ga-------~Viv~D~ 251 (435)
T 3gvp_A 187 VNDSVTKQKFDNLYCCRESILDGLKRT---TDMMFGGKQVVVCGYGEVGKGCCAALKAM-----GS-------IVYVTEI 251 (435)
T ss_dssp CTTCHHHHHHHTHHHHHHHHHHHHHHH---HCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECS
T ss_pred ecchhhhhhhhhhhhhHHHHHHHHHHh---hCceecCCEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEeC
Confidence 999999999999999865 68999999999999999999999988642 63 6888887
Q ss_pred CCccccCCcCCCChhhhhhccc-cCCCCCHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcCCCCc
Q 012553 375 KGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLWLIRK 450 (461)
Q Consensus 375 ~GLi~~~R~~~L~~~k~~fA~~-~~~~~~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Lsnp~~ 450 (461)
+.. +...|.. .-...+|.|+++. .|++|.+++..++++++.++.|.+ ..||+-.+++..
T Consensus 252 dp~------------ra~~A~~~G~~v~~Leeal~~--ADIVi~atgt~~lI~~e~l~~MK~---gailINvgrg~~ 311 (435)
T 3gvp_A 252 DPI------------CALQACMDGFRLVKLNEVIRQ--VDIVITCTGNKNVVTREHLDRMKN---SCIVCNMGHSNT 311 (435)
T ss_dssp CHH------------HHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCHHHHHHSCT---TEEEEECSSTTT
T ss_pred Chh------------hhHHHHHcCCEeccHHHHHhc--CCEEEECCCCcccCCHHHHHhcCC---CcEEEEecCCCc
Confidence 421 1111211 1123579999997 999999988888999999999986 789999998764
No 9
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.67 E-value=8.3e-08 Score=100.17 Aligned_cols=121 Identities=17% Similarity=0.168 Sum_probs=97.7
Q ss_pred CCCcee----------ccCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccc
Q 012553 298 TTHLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 367 (461)
Q Consensus 298 ~~~~~F----------nDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~ 367 (461)
..+|+| +|+++||+.++++|++. .++..|.+.+++|+|.|..|.++|+.+... |.
T Consensus 171 L~iPVinvndsvtk~~~Dn~~Gt~~slldgi~r---atg~~L~GktVgIiG~G~IG~~vA~~Lka~-----Ga------- 235 (436)
T 3h9u_A 171 LTIPAMNVNDSVTKSKFDNLYGCRESLVDGIKR---ATDVMIAGKTACVCGYGDVGKGCAAALRGF-----GA------- 235 (436)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHHH---HHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCceEeechhhhhhhhhccccchHHHHHHHHH---hcCCcccCCEEEEEeeCHHHHHHHHHHHHC-----CC-------
Confidence 579999 89999999999999975 469999999999999999999999988643 53
Q ss_pred eEEEEcCCCccccCCcCCCChhhhhhcc-ccCCCCCHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcC
Q 012553 368 KICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLW 446 (461)
Q Consensus 368 ~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Ls 446 (461)
+++++|++. .+...|. ..-...+|.|+++. +|++|.+++..++++++.++.|.+ ..||+-.+
T Consensus 236 ~Viv~D~~p------------~~a~~A~~~G~~~~sL~eal~~--ADVVilt~gt~~iI~~e~l~~MK~---gAIVINvg 298 (436)
T 3h9u_A 236 RVVVTEVDP------------INALQAAMEGYQVLLVEDVVEE--AHIFVTTTGNDDIITSEHFPRMRD---DAIVCNIG 298 (436)
T ss_dssp EEEEECSCH------------HHHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCTTTGGGCCT---TEEEEECS
T ss_pred EEEEECCCh------------hhhHHHHHhCCeecCHHHHHhh--CCEEEECCCCcCccCHHHHhhcCC---CcEEEEeC
Confidence 688888732 1111121 11123589999997 999999888888999999999976 89999999
Q ss_pred CCCc
Q 012553 447 LIRK 450 (461)
Q Consensus 447 np~~ 450 (461)
++..
T Consensus 299 Rg~v 302 (436)
T 3h9u_A 299 HFDT 302 (436)
T ss_dssp SSGG
T ss_pred CCCC
Confidence 8874
No 10
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=98.60 E-value=6e-08 Score=99.30 Aligned_cols=218 Identities=17% Similarity=0.213 Sum_probs=130.2
Q ss_pred cchHHHHHhcCCCCCeeEEEEecCceeeccCCCCCC--ccccchhhhhHHHhhCCCCCCceeeEEeecCCCchhcccCcc
Q 012553 167 KGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQ--GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEF 244 (461)
Q Consensus 167 ~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~--GmgI~~GKl~Ly~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~ 244 (461)
+..++++.+ .+.+|+|.++++..+|++|.+.. |..|+.+ ..+|. + +++|.+.+-
T Consensus 27 P~~v~~L~~----~G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~-~~~~~-a---------diil~vk~p--------- 82 (401)
T 1x13_A 27 PKTVEQLLK----LGFTVAVESGAGQLASFDDKAFVQAGAEIVEG-NSVWQ-S---------EIILKVNAP--------- 82 (401)
T ss_dssp HHHHHHHHH----TTCEEEEETTTTGGGTCCHHHHHHHTCEEECG-GGGGS-S---------SEEECSSCC---------
T ss_pred HHHHHHHHH----CCCEEEEEECCCcccCCChHHHHHCCCEEecc-HHHhc-C---------CeEEEeCCC---------
Confidence 445555544 45689999999999999999986 8899888 67776 1 577766531
Q ss_pred cccccccCCChhhhHHHHHHHHHHHHHhcCCCeeeeeecCC-cccHHHHHHHHcCCCceec-cCCC----------chhH
Q 012553 245 YIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFA-NHNAFELLAKYGTTHLVFN-DDIQ----------GTAS 312 (461)
Q Consensus 245 YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~~lIq~EDf~-~~~af~iL~ryr~~~~~Fn-DDiQ----------GTaa 312 (461)
..+.++.+++ ...+|-+=..+ ++.+++-+.+ ..+++|+ +.+. .+..
T Consensus 83 -----------------~~~~i~~l~~---~~~li~~~~~~~d~~~~~al~~--~gI~v~~~e~v~~~~~a~~l~~l~~~ 140 (401)
T 1x13_A 83 -----------------LDDEIALLNP---GTTLVSFIWPAQNPELMQKLAE--RNVTVMAMDSVPRISRAQSLDALSSM 140 (401)
T ss_dssp -----------------CHHHHTTCCT---TCEEEECCCGGGCHHHHHHHHH--TTCEEEEGGGCCCSGGGGGGCHHHHH
T ss_pred -----------------CHHHHHHhcC---CCcEEEEecCCCCHHHHHHHHH--CCCEEEEeehhhhhhhhcccchHHHH
Confidence 1233343322 11122221111 3333332222 5677772 2222 4555
Q ss_pred HHHHHHHHHHHHh----CC----------CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCcc
Q 012553 313 VVLAGVVAALKLI----GG----------TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (461)
Q Consensus 313 V~LAgll~Alk~~----g~----------~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi 378 (461)
..+|| .+|++.. ++ .+...+|+|+|+|.+|.++++.+... | | +++++|++.-.
T Consensus 141 a~~ag-~~av~~~~~~~~~~~~~~~~~~g~l~g~~V~ViGaG~iG~~aa~~a~~~-----G-----a--~V~v~D~~~~~ 207 (401)
T 1x13_A 141 ANIAG-YRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANSL-----G-----A--IVRAFDTRPEV 207 (401)
T ss_dssp HHHHH-HHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHT-----T-----C--EEEEECSCGGG
T ss_pred HHHHH-HHHHHHHHHhcccccCCceeeccCcCCCEEEEECCCHHHHHHHHHHHHC-----C-----C--EEEEEcCCHHH
Confidence 56665 4444432 22 25689999999999999999987542 5 2 68999986532
Q ss_pred ccCCcCCCC-------h-----hhhhhccccCC------CCCHHHhhcccCCcEEEeccCC-----CCCCCHHHHHHHhc
Q 012553 379 VSSRKDSLQ-------H-----FKKPWAHEHEP------VNNLLDAVKVIKPTILIGSSGV-----GRTFTKEVIEAMAS 435 (461)
Q Consensus 379 ~~~R~~~L~-------~-----~k~~fA~~~~~------~~~L~eaV~~vkptvLIG~S~~-----~g~Ft~evv~~Ma~ 435 (461)
..... .+. . .+..|++.... ..+|.++++. .|++|++... +.++|+++++.|.+
T Consensus 208 ~~~~~-~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e~~~~--aDvVI~~~~~pg~~ap~li~~~~l~~mk~ 284 (401)
T 1x13_A 208 KEQVQ-SMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAAQAKE--VDIIVTTALIPGKPAPKLITREMVDSMKA 284 (401)
T ss_dssp HHHHH-HTTCEECCC--------CCHHHHHHSHHHHHHHHHHHHHHHHH--CSEEEECCCCTTSCCCCCBCHHHHHTSCT
T ss_pred HHHHH-HcCCEEEEecccccccccccchhhccHHHHHHHHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcCCC
Confidence 11000 010 0 00011111000 0147788886 8999998533 25799999999975
Q ss_pred CCCCcEEEEcCCCC
Q 012553 436 FNEVVFQALLWLIR 449 (461)
Q Consensus 436 ~~erPIIF~Lsnp~ 449 (461)
..+|+-+|+|.
T Consensus 285 ---g~vIVdva~~~ 295 (401)
T 1x13_A 285 ---GSVIVDLAAQN 295 (401)
T ss_dssp ---TCEEEETTGGG
T ss_pred ---CcEEEEEcCCC
Confidence 78999999873
No 11
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.95 E-value=1.8e-05 Score=83.65 Aligned_cols=120 Identities=14% Similarity=0.180 Sum_probs=91.9
Q ss_pred CCCcee----------ccCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccc
Q 012553 298 TTHLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 367 (461)
Q Consensus 298 ~~~~~F----------nDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~ 367 (461)
..+|+| +|+++||+..++.|+. |.++..|.+.+++|.|+|..|.+||+.+... | |
T Consensus 225 L~iPvinvnDs~tK~~fDn~yGt~~sl~dgi~---r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa~-----G-----A-- 289 (488)
T 3ond_A 225 LLFPAINVNDSVTKSKFDNLYGCRHSLPDGLM---RATDVMIAGKVAVVAGYGDVGKGCAAALKQA-----G-----A-- 289 (488)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----T-----C--
T ss_pred CCCceecccchhhhhHhhhhccccHHHHHHHH---HHcCCcccCCEEEEECCCHHHHHHHHHHHHC-----C-----C--
Confidence 479999 7899999999999887 7889999999999999999999998887653 6 2
Q ss_pred eEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcCC
Q 012553 368 KICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLWL 447 (461)
Q Consensus 368 ~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Lsn 447 (461)
+++++|.+.. + .... +...-...++.++++. .|+++-.++...+++.+.++.|.. ..||+-.+.
T Consensus 290 ~Viv~D~~~~----~---a~~A----a~~g~dv~~lee~~~~--aDvVi~atG~~~vl~~e~l~~mk~---gaiVvNaG~ 353 (488)
T 3ond_A 290 RVIVTEIDPI----C---ALQA----TMEGLQVLTLEDVVSE--ADIFVTTTGNKDIIMLDHMKKMKN---NAIVCNIGH 353 (488)
T ss_dssp EEEEECSCHH----H---HHHH----HHTTCEECCGGGTTTT--CSEEEECSSCSCSBCHHHHTTSCT---TEEEEESSS
T ss_pred EEEEEcCCHH----H---HHHH----HHhCCccCCHHHHHHh--cCEEEeCCCChhhhhHHHHHhcCC---CeEEEEcCC
Confidence 7888887421 0 1000 1111123467788776 899999888888999999998865 788888876
Q ss_pred C
Q 012553 448 I 448 (461)
Q Consensus 448 p 448 (461)
+
T Consensus 354 ~ 354 (488)
T 3ond_A 354 F 354 (488)
T ss_dssp T
T ss_pred C
Confidence 5
No 12
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.72 E-value=0.00045 Score=69.76 Aligned_cols=228 Identities=14% Similarity=0.101 Sum_probs=121.3
Q ss_pred cchHHHHHhcCCCCCeeEEEEecCceeeccCCCCCC--ccccchhhhhHHHhhCCCCCCceeeEEeecCCC-----chhc
Q 012553 167 KGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQ--GMGIPVGKLALYTALGGIRPSACLPITVDVGTN-----NEQL 239 (461)
Q Consensus 167 ~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~--GmgI~~GKl~Ly~a~gGI~P~~~lPI~LDvGTn-----ne~L 239 (461)
+..++++.+ .+.+|+|.++++...|+.|.... |..|+.++..++ ++.| |+|.+.+- +++.
T Consensus 20 P~~v~~L~~----~G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~---~~ad------iil~v~~p~~~~~~~~~ 86 (384)
T 1l7d_A 20 PEVVKKLVG----LGFEVIVEQGAGVGASITDDALTAAGATIASTAAQAL---SQAD------VVWKVQRPMTAEEGTDE 86 (384)
T ss_dssp HHHHHHHHH----TTCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHH---SSCS------EEEEEECCCCGGGSCCG
T ss_pred HHHHHHHHh----CCCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhh---cCCC------EEEEecCcccccCCHHH
Confidence 344444444 36789999999999999998765 788888877666 3333 66666532 1111
Q ss_pred ---c-cCcccccccccCCChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCcccHHHHHHHHcCCCceeccCCCchhHHHH
Q 012553 240 ---L-KDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQGTASVVL 315 (461)
Q Consensus 240 ---L-~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~~lIq~EDf~~~~af~iL~ryr~~~~~FnDDiQGTaaV~L 315 (461)
+ ..-.+++.-+.- ++. +.++++.+ -|- .++++|-+....+ ...+++|+ ....+
T Consensus 87 i~~l~~~~~~i~~~~~~-----~~~---~~~~~~~~-~gi-~~~~~e~~~~~~~-------~~~l~~l~------~~a~~ 143 (384)
T 1l7d_A 87 VALIKEGAVLMCHLGAL-----TNR---PVVEALTK-RKI-TAYAMELMPRISR-------AQSMDILS------SQSNL 143 (384)
T ss_dssp GGGSCTTCEEEEECCGG-----GCH---HHHHHHHH-TTC-EEEEGGGCCCSGG-------GGGGCHHH------HHHHH
T ss_pred HHhhccCCEEEEEeccc-----CCH---HHHHHHHH-CCC-EEEEecccccccc-------ccccchhh------HHHHH
Confidence 1 112223332221 111 12222222 111 2233322221000 00122222 11122
Q ss_pred H---HHHHHHHHhCC----------CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCC
Q 012553 316 A---GVVAALKLIGG----------TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSR 382 (461)
Q Consensus 316 A---gll~Alk~~g~----------~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R 382 (461)
| +++.+.+..++ .+...+|+|+|+|.+|.++++.+.. .| | +++++|++.--....
T Consensus 144 ag~~av~~~~~~~~~~~~~~~~~~~~l~g~~V~ViGaG~iG~~aa~~a~~-----~G-----a--~V~~~d~~~~~~~~~ 211 (384)
T 1l7d_A 144 AGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKR-----LG-----A--VVMATDVRAATKEQV 211 (384)
T ss_dssp HHHHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHH-----TT-----C--EEEEECSCSTTHHHH
T ss_pred HHHHHHHHHHHHhhhcccchhccCCCCCCCEEEEECCCHHHHHHHHHHHH-----CC-----C--EEEEEeCCHHHHHHH
Confidence 3 55666666554 6789999999999999999987754 26 2 499999853210000
Q ss_pred cCCCC-------h-------hhhhhccccC------CCCCHHHhhcccCCcEEEecc---C--CCCCCCHHHHHHHhcCC
Q 012553 383 KDSLQ-------H-------FKKPWAHEHE------PVNNLLDAVKVIKPTILIGSS---G--VGRTFTKEVIEAMASFN 437 (461)
Q Consensus 383 ~~~L~-------~-------~k~~fA~~~~------~~~~L~eaV~~vkptvLIG~S---~--~~g~Ft~evv~~Ma~~~ 437 (461)
.+ +. . .+-.|++... ....+.+.++. .|++|.++ + .+.+++++.++.|.+
T Consensus 212 ~~-~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~--aDvVi~~~~~pg~~~~~li~~~~l~~mk~-- 286 (384)
T 1l7d_A 212 ES-LGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVK--TDIAITTALIPGKPAPVLITEEMVTKMKP-- 286 (384)
T ss_dssp HH-TTCEECCC-----------------------CCHHHHHHHHHTT--CSEEEECCCCTTSCCCCCSCHHHHTTSCT--
T ss_pred HH-cCCeEEeecccccccccccccchhhcCHHHHhhhHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcCCC--
Confidence 00 00 0 0001111100 00127777876 99999988 3 234689999999975
Q ss_pred CCcEEEEcCCC
Q 012553 438 EVVFQALLWLI 448 (461)
Q Consensus 438 erPIIF~Lsnp 448 (461)
..+|+-++.+
T Consensus 287 -g~vivdva~~ 296 (384)
T 1l7d_A 287 -GSVIIDLAVE 296 (384)
T ss_dssp -TCEEEETTGG
T ss_pred -CCEEEEEecC
Confidence 6788888854
No 13
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.48 E-value=0.00051 Score=72.27 Aligned_cols=120 Identities=17% Similarity=0.181 Sum_probs=92.2
Q ss_pred CCCcee----------ccCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccc
Q 012553 298 TTHLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 367 (461)
Q Consensus 298 ~~~~~F----------nDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~ 367 (461)
..+|+| .|+..||+-.++.|+. |.+|..|.+.+++|+|.|..|.++|+.+... |+
T Consensus 207 L~~PvinVnds~tK~~fDn~yG~~eslvdgI~---Ratg~~L~GKTVgVIG~G~IGr~vA~~lraf-----Ga------- 271 (464)
T 3n58_A 207 LPFPAINVNDSVTKSKFDNKYGCKESLVDGIR---RGTDVMMAGKVAVVCGYGDVGKGSAQSLAGA-----GA------- 271 (464)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCCEEeeccHhhhhhhhhhhcchHHHHHHHH---HhcCCcccCCEEEEECcCHHHHHHHHHHHHC-----CC-------
Confidence 479999 6788999999998886 5679999999999999999999999987542 53
Q ss_pred eEEEEcCCCccccCCcCCCChhhhhhcc-ccCCCCCHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcC
Q 012553 368 KICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLW 446 (461)
Q Consensus 368 ~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Ls 446 (461)
+++++|.+.. ....|. ..-...+|.|+++. +|+++-+++..++++++.++.|.+ ..||.-.+
T Consensus 272 ~Viv~d~dp~------------~a~~A~~~G~~vv~LeElL~~--ADIVv~atgt~~lI~~e~l~~MK~---GAILINvG 334 (464)
T 3n58_A 272 RVKVTEVDPI------------CALQAAMDGFEVVTLDDAAST--ADIVVTTTGNKDVITIDHMRKMKD---MCIVGNIG 334 (464)
T ss_dssp EEEEECSSHH------------HHHHHHHTTCEECCHHHHGGG--CSEEEECCSSSSSBCHHHHHHSCT---TEEEEECS
T ss_pred EEEEEeCCcc------------hhhHHHhcCceeccHHHHHhh--CCEEEECCCCccccCHHHHhcCCC---CeEEEEcC
Confidence 6888876321 111111 11123579999997 999999888788999999999976 77887666
Q ss_pred CCC
Q 012553 447 LIR 449 (461)
Q Consensus 447 np~ 449 (461)
...
T Consensus 335 Rgd 337 (464)
T 3n58_A 335 HFD 337 (464)
T ss_dssp SST
T ss_pred CCC
Confidence 554
No 14
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.46 E-value=0.00011 Score=76.06 Aligned_cols=103 Identities=16% Similarity=0.175 Sum_probs=68.1
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcC------CCC-------hhhhhhc
Q 012553 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD------SLQ-------HFKKPWA 394 (461)
Q Consensus 328 ~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~------~L~-------~~k~~fA 394 (461)
.+...||+|+|+|.+|.++|+.+... | | +++++|++.-......+ .+. +-+..|+
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a~~l-----G-----a--~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya 254 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATARRL-----G-----A--VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYA 254 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHT-----T-----C--EEEEECSSTTHHHHHHHTTCEECCCCC-------------
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHC-----C-----C--EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchh
Confidence 46789999999999999999988643 6 2 68999997532111000 000 0011244
Q ss_pred cccCC------CCCHHHhhcccCCcEEEeccC-----CCCCCCHHHHHHHhcCCCCcEEEEcCC
Q 012553 395 HEHEP------VNNLLDAVKVIKPTILIGSSG-----VGRTFTKEVIEAMASFNEVVFQALLWL 447 (461)
Q Consensus 395 ~~~~~------~~~L~eaV~~vkptvLIG~S~-----~~g~Ft~evv~~Ma~~~erPIIF~Lsn 447 (461)
+...+ ..+|.|+++. .|++|++.. .+.+||+++++.|.+ -++|+-+|-
T Consensus 255 ~e~s~~~~~~~~~~l~e~l~~--aDVVI~tvlipg~~ap~Lvt~emv~~Mk~---GsVIVDvA~ 313 (405)
T 4dio_A 255 KEMSGEYQVKQAALVAEHIAK--QDIVITTALIPGRPAPRLVTREMLDSMKP---GSVVVDLAV 313 (405)
T ss_dssp ----CHHHHHHHHHHHHHHHT--CSEEEECCCCSSSCCCCCBCHHHHTTSCT---TCEEEETTG
T ss_pred hhcchhhhhhhHhHHHHHhcC--CCEEEECCcCCCCCCCEEecHHHHhcCCC---CCEEEEEeC
Confidence 32111 2479999998 999999853 335899999999986 899999984
No 15
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=97.14 E-value=0.00043 Score=71.17 Aligned_cols=104 Identities=21% Similarity=0.109 Sum_probs=67.3
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcC------CCC---hhhhhhccc---
Q 012553 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD------SLQ---HFKKPWAHE--- 396 (461)
Q Consensus 329 l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~------~L~---~~k~~fA~~--- 396 (461)
+...|++|+|+|.+|..+|+.+... |. +++++|++.-....-.+ .++ .-...|++.
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~ 249 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRL-----GA-------KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSE 249 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHH-----TC-------EEEEECSSGGGHHHHHHTTCEECCCC-------------CH
T ss_pred cCCCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhH
Confidence 5789999999999999999988653 62 69999987421100000 000 000112211
Q ss_pred ---cCCCCCHHHhhcccCCcEEEeccCC-----CCCCCHHHHHHHhcCCCCcEEEEcCCCC
Q 012553 397 ---HEPVNNLLDAVKVIKPTILIGSSGV-----GRTFTKEVIEAMASFNEVVFQALLWLIR 449 (461)
Q Consensus 397 ---~~~~~~L~eaV~~vkptvLIG~S~~-----~g~Ft~evv~~Ma~~~erPIIF~Lsnp~ 449 (461)
.....+|.++++. .|++|++... +.+||+++++.|.+ ..+|+-+|-+.
T Consensus 250 ~~~~~~~~~l~e~l~~--aDIVI~tv~iPg~~ap~Lvt~emv~~Mkp---GsVIVDvA~d~ 305 (381)
T 3p2y_A 250 AERAQQQQALEDAITK--FDIVITTALVPGRPAPRLVTAAAATGMQP---GSVVVDLAGET 305 (381)
T ss_dssp HHHHHHHHHHHHHHTT--CSEEEECCCCTTSCCCCCBCHHHHHTSCT---TCEEEETTGGG
T ss_pred HHHhhhHHHHHHHHhc--CCEEEECCCCCCcccceeecHHHHhcCCC---CcEEEEEeCCC
Confidence 0112468899987 9999997433 34799999999986 88999998543
No 16
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.65 E-value=0.0036 Score=62.64 Aligned_cols=97 Identities=16% Similarity=0.165 Sum_probs=79.0
Q ss_pred chhHHHHHHHHHHHHHhCCCcccceEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCC
Q 012553 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 387 (461)
Q Consensus 309 GTaaV~LAgll~Alk~~g~~l~d~riv~~GAG-sAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~ 387 (461)
+-.-+|-.|++-.++-.+.+++..++||+|+| ..|.-+|.++... | ..+.+++++
T Consensus 143 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~------------ 198 (301)
T 1a4i_A 143 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWN-----N-------ATVTTCHSK------------ 198 (301)
T ss_dssp CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT------------
T ss_pred CccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhC-----C-------CeEEEEECC------------
Confidence 44567888899999999999999999999999 5899999888652 4 358888743
Q ss_pred hhhhhhccccCCCCCHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcCCCC
Q 012553 388 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLWLIR 449 (461)
Q Consensus 388 ~~k~~fA~~~~~~~~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Lsnp~ 449 (461)
..+|.+.++. +|++|+..+.++.+|+++|+ +--+|+=.+-++
T Consensus 199 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~~ 240 (301)
T 1a4i_A 199 ------------TAHLDEEVNK--GDILVVATGQPEMVKGEWIK------PGAIVIDCGINY 240 (301)
T ss_dssp ------------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC------TTCEEEECCCBC
T ss_pred ------------cccHHHHhcc--CCEEEECCCCcccCCHHHcC------CCcEEEEccCCC
Confidence 1468999997 99999999999999999985 356777777653
No 17
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.59 E-value=0.0048 Score=61.25 Aligned_cols=92 Identities=18% Similarity=0.211 Sum_probs=73.8
Q ss_pred hHHHHHHHHHHHHHhCCCcccceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChh
Q 012553 311 ASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF 389 (461)
Q Consensus 311 aaV~LAgll~Alk~~g~~l~d~riv~~GAGs-AgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~ 389 (461)
.-+|-.|++..++-.+.+|++.++|++|+|. .|..+|.++... |. .+.+++|+
T Consensus 141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~hs~-------------- 194 (285)
T 3l07_A 141 ESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNA-----KA-------TVTTCHRF-------------- 194 (285)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT--------------
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC--------------
Confidence 3567788999999999999999999999976 899999988652 42 57777653
Q ss_pred hhhhccccCCCCCHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcC
Q 012553 390 KKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLW 446 (461)
Q Consensus 390 k~~fA~~~~~~~~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Ls 446 (461)
..+|.+.++. +|++|...+.++.+|.++|+ +--+|+=++
T Consensus 195 ----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvg 233 (285)
T 3l07_A 195 ----------TTDLKSHTTK--ADILIVAVGKPNFITADMVK------EGAVVIDVG 233 (285)
T ss_dssp ----------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC------TTCEEEECC
T ss_pred ----------chhHHHhccc--CCEEEECCCCCCCCCHHHcC------CCcEEEEec
Confidence 1358899987 99999999999999999884 245666554
No 18
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.49 E-value=0.047 Score=56.93 Aligned_cols=176 Identities=18% Similarity=0.124 Sum_probs=119.8
Q ss_pred CChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCcc-cHHH-HHHHHc---CC--Ccee----------ccCCCchhHHHH
Q 012553 253 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANH-NAFE-LLAKYG---TT--HLVF----------NDDIQGTASVVL 315 (461)
Q Consensus 253 ~~g~~Y~~~idefv~av~~~fGp~~lIq~EDf~~~-~af~-iL~ryr---~~--~~~F----------nDDiQGTaaV~L 315 (461)
.+-.|-..|...|++++.+.-||+.-|-=+|++.. .-.. +.+.|+ .. -.++ +|--.-||-=+.
T Consensus 126 ~s~~El~r~~r~f~~~l~~~iG~~~dipApDvgt~~~~m~~~~~~y~~~~g~~~~~~vTGkp~~~GGs~~r~~aTg~Gv~ 205 (424)
T 3k92_A 126 MSFGELERLSRGYVRAISQIVGPTKDIPAPDVYTNSQIMAWMMDEYSRLREFDSPGFITGKPLVLGGSQGRETATAQGVT 205 (424)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGCSSCCGGGTCCTTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCccCCcCCCCHHHHHHHHHHHHHHhCCCCcceeecccccCCCcCCCcccHHHHHH
Confidence 34556677889999999998899888888898763 2222 446663 21 1122 333455888888
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhh-hhhc
Q 012553 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK-KPWA 394 (461)
Q Consensus 316 Agll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k-~~fA 394 (461)
.++-.+++..|.+|++.||+|-|.|..|...|+++.+. |. +-+-+.|++|-|++.. .|+... +.+.
T Consensus 206 ~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~aa~~l~e~-----Ga------kVVavsD~~G~iyd~~--GlD~~~l~~~~ 272 (424)
T 3k92_A 206 ICIEEAVKKKGIKLQNARIIIQGFGNAGSFLAKFMHDA-----GA------KVIGISDANGGLYNPD--GLDIPYLLDKR 272 (424)
T ss_dssp HHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHH-----TC------EEEEEECSSCEEECTT--CCCHHHHHHHC
T ss_pred HHHHHHHHHcCCCcccCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC--CCCHHHHHHHH
Confidence 88999999999999999999999999999999998764 52 4467999999999764 354322 1222
Q ss_pred cccC-------CCCCHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcCC
Q 012553 395 HEHE-------PVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLWL 447 (461)
Q Consensus 395 ~~~~-------~~~~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Lsn 447 (461)
.... ..-+-.+ +-.++.||||=++.+ +.+|++-++.+ .-.+|.--+|
T Consensus 273 ~~~g~i~~~~a~~~~~~~-i~~~~~DIliPcA~~-n~I~~~~a~~l----~ak~V~EgAN 326 (424)
T 3k92_A 273 DSFGMVTNLFTDVITNEE-LLEKDCDILVPAAIS-NQITAKNAHNI----QASIVVERAN 326 (424)
T ss_dssp CSSSCCGGGCSCCBCHHH-HHHSCCSEEEECSCS-SCBCTTTGGGC----CCSEEECCSS
T ss_pred HHhCCCCCCCcEEecCcc-ceeccccEEeecCcc-cccChhhHhhc----CceEEEcCCC
Confidence 1111 1112233 334678999977775 58888777765 3566665555
No 19
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.44 E-value=0.023 Score=55.01 Aligned_cols=116 Identities=16% Similarity=0.135 Sum_probs=78.4
Q ss_pred chhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCCh
Q 012553 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 388 (461)
Q Consensus 309 GTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~ 388 (461)
.+-+|+=.++..++...+..+.+.+++|+|+|..|..+|+.+... |. +++.+|+.. .+ ...
T Consensus 133 ~~~svae~a~~~~l~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~-----G~-------~V~~~dr~~----~~---~~~ 193 (293)
T 3d4o_A 133 NSIPTAEGTIMMAIQHTDFTIHGANVAVLGLGRVGMSVARKFAAL-----GA-------KVKVGARES----DL---LAR 193 (293)
T ss_dssp HHHHHHHHHHHHHHHHCSSCSTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSH----HH---HHH
T ss_pred ccHhHHHHHHHHHHHhcCCCCCCCEEEEEeeCHHHHHHHHHHHhC-----CC-------EEEEEECCH----HH---HHH
Confidence 344555555656667778899999999999999999999987542 52 688888742 11 111
Q ss_pred hhhhhccccCCCCCHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcC-CCCc
Q 012553 389 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLW-LIRK 450 (461)
Q Consensus 389 ~k~~fA~~~~~~~~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Ls-np~~ 450 (461)
.+ .+--..-...+|.++++. .|++|-... .+.++++.++.|.+ ..+++=++ +|..
T Consensus 194 ~~-~~g~~~~~~~~l~~~l~~--aDvVi~~~p-~~~i~~~~l~~mk~---~~~lin~ar~~~~ 249 (293)
T 3d4o_A 194 IA-EMGMEPFHISKAAQELRD--VDVCINTIP-ALVVTANVLAEMPS---HTFVIDLASKPGG 249 (293)
T ss_dssp HH-HTTSEEEEGGGHHHHTTT--CSEEEECCS-SCCBCHHHHHHSCT---TCEEEECSSTTCS
T ss_pred HH-HCCCeecChhhHHHHhcC--CCEEEECCC-hHHhCHHHHHhcCC---CCEEEEecCCCCC
Confidence 11 110000012468888876 999997664 57999999998865 67888887 6653
No 20
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=96.42 E-value=0.17 Score=53.23 Aligned_cols=183 Identities=15% Similarity=0.066 Sum_probs=123.5
Q ss_pred CChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCcccH-----HHHHHHHcCC-Ccee----------ccCCCchhHHHHH
Q 012553 253 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA-----FELLAKYGTT-HLVF----------NDDIQGTASVVLA 316 (461)
Q Consensus 253 ~~g~~Y~~~idefv~av~~~fGp~~lIq~EDf~~~~a-----f~iL~ryr~~-~~~F----------nDDiQGTaaV~LA 316 (461)
.+..|-..|...||..+.+..||+.=|--.|+...-. +..-++++.. -.|| .+.-.-||-=+.-
T Consensus 141 ~s~~El~R~~~~f~~eL~~~iG~d~dvpa~Dig~~~~em~~~~~~y~~~~~~~~~v~TGk~~~~GGs~~r~~aTg~Gv~~ 220 (450)
T 4fcc_A 141 KSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLVY 220 (450)
T ss_dssp CCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTCCSCCCSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhheecCCCCCCccceeecchhhhhhhhhhhhccCCCceeecCCCcccCCCCCCCCceeeeHHH
Confidence 4566778889999999999999999999999975322 2233344332 2233 2233347777788
Q ss_pred HHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccc
Q 012553 317 GVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE 396 (461)
Q Consensus 317 gll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~ 396 (461)
++-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +=|-+.|++|-|++.. .++..+.....+
T Consensus 221 ~~~~~~~~~~~~l~Gk~vaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~i~d~~--Gid~e~l~~l~e 287 (450)
T 4fcc_A 221 FTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEF-----GA------RVITASDSSGTVVDES--GFTKEKLARLIE 287 (450)
T ss_dssp HHHHHHHHTTCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEEETTEEEECTT--CCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCcCCCEEEEeCCChHHHHHHHHHHhc-----CC------eEEEEecCCceEEeCC--CCCHHHHHHHHH
Confidence 8889999999999999999999999999999998753 52 4566789999988753 355433211110
Q ss_pred --cCCCCCHHH-------------hhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcCC-CCc
Q 012553 397 --HEPVNNLLD-------------AVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLWL-IRK 450 (461)
Q Consensus 397 --~~~~~~L~e-------------aV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Lsn-p~~ 450 (461)
......+.+ .+-.++.|||+=+..+ +.+|++-++.+.+. --.+|.-=+| |++
T Consensus 288 ~k~~~~g~v~~~~~~~g~~~~~~~~i~~~~~DI~iPcAl~-~~I~~~~a~~L~a~-g~k~IaEgAN~p~t 355 (450)
T 4fcc_A 288 IKSSRDGRVADYAKEFGLVYLEGQQPWSVPVDIALPCATQ-NELDVDAAHQLIAN-GVKAVAEGANMPTT 355 (450)
T ss_dssp HHTSTTCCHHHHHHHHTCEEEETCCGGGSCCSEEEECSCT-TCBCHHHHHHHHHT-TCCEEECCSSSCBC
T ss_pred HhcccCCccccccccCCcEEecCcccccCCccEEeecccc-ccccHHHHHHHHhc-CceEEecCCCCCCC
Confidence 000011111 1334679999988875 59999999998642 2346665555 443
No 21
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.40 E-value=0.0077 Score=59.80 Aligned_cols=93 Identities=17% Similarity=0.212 Sum_probs=74.6
Q ss_pred hhHHHHHHHHHHHHHhCCCcccceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCCh
Q 012553 310 TASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 388 (461)
Q Consensus 310 TaaV~LAgll~Alk~~g~~l~d~riv~~GAGs-AgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~ 388 (461)
-.-+|-.|++..++-.+.++++.++||+|+|. .|..+|.++... |. .+.+++++
T Consensus 139 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~-----gA-------tVtv~h~~------------- 193 (285)
T 3p2o_A 139 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNA-----GA-------TVSVCHIK------------- 193 (285)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-------------
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC-------------
Confidence 34578888999999999999999999999876 899999998652 42 57888752
Q ss_pred hhhhhccccCCCCCHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcC
Q 012553 389 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLW 446 (461)
Q Consensus 389 ~k~~fA~~~~~~~~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Ls 446 (461)
..+|.+.++. +|++|...+.++.+|.++|+ +--+|+=++
T Consensus 194 -----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVg 232 (285)
T 3p2o_A 194 -----------TKDLSLYTRQ--ADLIIVAAGCVNLLRSDMVK------EGVIVVDVG 232 (285)
T ss_dssp -----------CSCHHHHHTT--CSEEEECSSCTTCBCGGGSC------TTEEEEECC
T ss_pred -----------chhHHHHhhc--CCEEEECCCCCCcCCHHHcC------CCeEEEEec
Confidence 1358899987 99999999999999999984 244555443
No 22
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=96.31 E-value=0.0077 Score=59.56 Aligned_cols=92 Identities=10% Similarity=0.137 Sum_probs=73.6
Q ss_pred chhHHHHHHHHHHHHHhCCCcccceEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCC
Q 012553 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 387 (461)
Q Consensus 309 GTaaV~LAgll~Alk~~g~~l~d~riv~~GAG-sAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~ 387 (461)
+-.-+|-.|++..++..+ ++..++|++|+| ..|..+|.++... |. .+.+++++
T Consensus 130 ~~~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~-----gA-------tVtv~~~~------------ 183 (276)
T 3ngx_A 130 FLVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNR-----NY-------TVSVCHSK------------ 183 (276)
T ss_dssp SSCCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT------------
T ss_pred CCCCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHC-----CC-------eEEEEeCC------------
Confidence 334578889999999998 999999999998 5899999998652 42 57888752
Q ss_pred hhhhhhccccCCCCCHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcC
Q 012553 388 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLW 446 (461)
Q Consensus 388 ~~k~~fA~~~~~~~~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Ls 446 (461)
..+|.++++. +|++|...+.++.+|+++++ +--+|+=++
T Consensus 184 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvg 222 (276)
T 3ngx_A 184 ------------TKDIGSMTRS--SKIVVVAVGRPGFLNREMVT------PGSVVIDVG 222 (276)
T ss_dssp ------------CSCHHHHHHH--SSEEEECSSCTTCBCGGGCC------TTCEEEECC
T ss_pred ------------cccHHHhhcc--CCEEEECCCCCccccHhhcc------CCcEEEEec
Confidence 1468899998 99999999999999999874 245666665
No 23
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=96.22 E-value=0.0074 Score=60.00 Aligned_cols=97 Identities=16% Similarity=0.120 Sum_probs=77.7
Q ss_pred chhHHHHHHHHHHHHHhCCCcccceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCC
Q 012553 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 387 (461)
Q Consensus 309 GTaaV~LAgll~Alk~~g~~l~d~riv~~GAGs-AgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~ 387 (461)
+-.-+|-.|++-.++..+.+++..++||+|+|. .|.-+|.++... | ..+.+++++
T Consensus 137 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~------------ 192 (288)
T 1b0a_A 137 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLA-----G-------CTTTVTHRF------------ 192 (288)
T ss_dssp SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTT-----T-------CEEEEECSS------------
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHC-----C-------CeEEEEeCC------------
Confidence 445678888999999999999999999999995 699999887642 3 368888642
Q ss_pred hhhhhhccccCCCCCHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcCCCC
Q 012553 388 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLWLIR 449 (461)
Q Consensus 388 ~~k~~fA~~~~~~~~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Lsnp~ 449 (461)
..+|.+.++. +|++|+..+.++.+|+++|+ +--+|+=++-+.
T Consensus 193 ------------t~~L~~~~~~--ADIVI~Avg~p~lI~~~~vk------~GavVIDVgi~r 234 (288)
T 1b0a_A 193 ------------TKNLRHHVEN--ADLLIVAVGKPGFIPGDWIK------EGAIVIDVGINR 234 (288)
T ss_dssp ------------CSCHHHHHHH--CSEEEECSCCTTCBCTTTSC------TTCEEEECCCEE
T ss_pred ------------chhHHHHhcc--CCEEEECCCCcCcCCHHHcC------CCcEEEEccCCc
Confidence 1468999998 99999999999999999984 345777666553
No 24
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=96.21 E-value=0.0096 Score=58.00 Aligned_cols=157 Identities=15% Similarity=0.193 Sum_probs=90.3
Q ss_pred HHHHHHHHHH-hcCCCeeeeeecCCcccHHHHHHHHc---------CCCceeccC-CCchhHHHHHHHHHH-HHHhCCCc
Q 012553 262 LDEFMSAVKQ-NYGEKVLIQFEDFANHNAFELLAKYG---------TTHLVFNDD-IQGTASVVLAGVVAA-LKLIGGTL 329 (461)
Q Consensus 262 idefv~av~~-~fGp~~lIq~EDf~~~~af~iL~ryr---------~~~~~FnDD-iQGTaaV~LAgll~A-lk~~g~~l 329 (461)
+.++++.++. .|++ ++.--=-...+++++++.. +.+ ++.|+ ..|.-.= ..|++.+ ++-.|.++
T Consensus 44 l~~~~~~~~~~~~~G---~nVTiP~K~~v~~~~d~l~~~A~~iGAvNTv-~~~~g~l~G~NTD-~~G~~~~lL~~~~~~l 118 (272)
T 3pwz_A 44 FEAQVLQFRSEGGKG---MNITAPFKLRAFELADRRSERAQLARAANAL-KFEDGRIVAENFD-GIGLLRDIEENLGEPL 118 (272)
T ss_dssp HHHHHHHHHHTTCCE---EEECTTCHHHHHHHCSEECHHHHHHTCCSEE-EEETTEEEEECCH-HHHHHHHHHTTSCCCC
T ss_pred HHHHHHHHhhCCCCE---EEECchhHHHHHHHHhhCCHHHHHhCccceE-EccCCeEEEecCC-HHHHHHHHHHHcCCCc
Confidence 5677777653 5655 5554444455666666542 122 44443 3553332 4588888 88788899
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhcc
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~ 409 (461)
++.+++|+|||.+|.+++..+... |. ++|+++++. .++ .....+.+....-...++.+.-.
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~-----G~------~~v~i~~R~----~~~---a~~la~~~~~~~~~~~~~~~l~~- 179 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQA-----GP------SELVIANRD----MAK---ALALRNELDHSRLRISRYEALEG- 179 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHT-----CC------SEEEEECSC----HHH---HHHHHHHHCCTTEEEECSGGGTT-
T ss_pred cCCEEEEECccHHHHHHHHHHHHc-----CC------CEEEEEeCC----HHH---HHHHHHHhccCCeeEeeHHHhcc-
Confidence 999999999998888888777652 53 578888873 121 11112222210000112222211
Q ss_pred cCCcEEEeccCCC-----CCCCHHHHHHHhcCCCCcEEEEc-CCC
Q 012553 410 IKPTILIGSSGVG-----RTFTKEVIEAMASFNEVVFQALL-WLI 448 (461)
Q Consensus 410 vkptvLIG~S~~~-----g~Ft~evv~~Ma~~~erPIIF~L-snp 448 (461)
-++|++|-++..+ -.+..+.+ .+..+|+=+ .||
T Consensus 180 ~~~DivInaTp~gm~~~~~~i~~~~l------~~~~~V~DlvY~P 218 (272)
T 3pwz_A 180 QSFDIVVNATSASLTADLPPLPADVL------GEAALAYELAYGK 218 (272)
T ss_dssp CCCSEEEECSSGGGGTCCCCCCGGGG------TTCSEEEESSCSC
T ss_pred cCCCEEEECCCCCCCCCCCCCCHHHh------CcCCEEEEeecCC
Confidence 3599999776543 12444332 346788876 676
No 25
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=96.18 E-value=0.011 Score=58.84 Aligned_cols=92 Identities=17% Similarity=0.196 Sum_probs=73.4
Q ss_pred hHHHHHHHHHHHHHhCCCcccceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChh
Q 012553 311 ASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF 389 (461)
Q Consensus 311 aaV~LAgll~Alk~~g~~l~d~riv~~GAGs-AgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~ 389 (461)
.-+|-.|++..++-.+.+++..++|++|+|. .|..+|.++... |. .+.+++++
T Consensus 141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~-----gA-------tVtv~hs~-------------- 194 (286)
T 4a5o_A 141 RPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLG-----GC-------TVTVTHRF-------------- 194 (286)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHT-----TC-------EEEEECTT--------------
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC--------------
Confidence 3567788999999999999999999999875 899999998652 42 57777652
Q ss_pred hhhhccccCCCCCHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcC
Q 012553 390 KKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLW 446 (461)
Q Consensus 390 k~~fA~~~~~~~~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Ls 446 (461)
..+|.+.++. +|++|+..+.++.+|.++|+ +--+|+=++
T Consensus 195 ----------T~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvg 233 (286)
T 4a5o_A 195 ----------TRDLADHVSR--ADLVVVAAGKPGLVKGEWIK------EGAIVIDVG 233 (286)
T ss_dssp ----------CSCHHHHHHT--CSEEEECCCCTTCBCGGGSC------TTCEEEECC
T ss_pred ----------CcCHHHHhcc--CCEEEECCCCCCCCCHHHcC------CCeEEEEec
Confidence 1358899987 99999999999999999984 244666554
No 26
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=96.13 E-value=0.066 Score=55.65 Aligned_cols=174 Identities=13% Similarity=0.089 Sum_probs=117.8
Q ss_pred ChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCccc--HHHHHHHHc---CC--Ccee----------ccCCCchhHHHHH
Q 012553 254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHN--AFELLAKYG---TT--HLVF----------NDDIQGTASVVLA 316 (461)
Q Consensus 254 ~g~~Y~~~idefv~av~~~fGp~~lIq~EDf~~~~--af~iL~ryr---~~--~~~F----------nDDiQGTaaV~LA 316 (461)
+..|-..|...|++++.+.-||..-|-=+|++..- ---+.+.|+ .. -.++ .+.-.-||-=+.-
T Consensus 124 s~~El~r~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~~ 203 (419)
T 3aoe_E 124 SPQELERLVRRYTAELVGLIGPDSDILGPDLGADQQVMAWIMDTYSMTVGSTVPGVVTGKPHALGGSEGRDDAAGLGALL 203 (419)
T ss_dssp CHHHHHHHHHHHHHHHTTTCBTTTEEEEEBTTBCHHHHHHHHHHHHHHHTSCCGGGBSSCCGGGTCCSSCSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCCEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeeeccchhcCCCCCCccchHHHHHH
Confidence 44566778899999999988999999999998742 223455662 11 1222 2233447777777
Q ss_pred HHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEE-EEcCCCccccCCcCCCChhh-hhhc
Q 012553 317 GVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDSLQHFK-KPWA 394 (461)
Q Consensus 317 gll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~-lvDs~GLi~~~R~~~L~~~k-~~fA 394 (461)
++-.+++..|.+|++.||+|.|.|..|...|++|.+. |. +++ +.|++|-|++.. .++..+ +.++
T Consensus 204 ~~~~~~~~~g~~l~gk~vaVqG~GnVG~~~a~~L~~~-----Ga-------kVVavsD~~G~i~dp~--Gld~~~l~~~~ 269 (419)
T 3aoe_E 204 VLEALAKRRGLDLRGARVVVQGLGQVGAAVALHAERL-----GM-------RVVAVATSMGGMYAPE--GLDVAEVLSAY 269 (419)
T ss_dssp HHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEEETTEEEECTT--CCCHHHHHHHH
T ss_pred HHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHHC-----CC-------EEEEEEcCCCeEECCC--CCCHHHHHHHH
Confidence 7888899999999999999999999999999988652 52 566 999999998764 344322 1111
Q ss_pred cccCCCC----CHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcCC
Q 012553 395 HEHEPVN----NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLWL 447 (461)
Q Consensus 395 ~~~~~~~----~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Lsn 447 (461)
....... +-.+ +-.++.|||+=++. ++.+|++-.+.+ .-.||.-=+|
T Consensus 270 ~~~g~v~~~~~~~~e-~~~~~~DVliP~A~-~n~i~~~~A~~l----~ak~V~EgAN 320 (419)
T 3aoe_E 270 EATGSLPRLDLAPEE-VFGLEAEVLVLAAR-EGALDGDRARQV----QAQAVVEVAN 320 (419)
T ss_dssp HHHSSCSCCCBCTTT-GGGSSCSEEEECSC-TTCBCHHHHTTC----CCSEEEECST
T ss_pred HhhCCcceeeccchh-hhccCceEEEeccc-ccccccchHhhC----CceEEEECCC
Confidence 1111010 0112 34467899997776 458888877776 3567777776
No 27
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=96.05 E-value=0.011 Score=58.98 Aligned_cols=95 Identities=24% Similarity=0.264 Sum_probs=74.4
Q ss_pred CchhHHHHHHHHHHHHHhCCCcccceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCC
Q 012553 308 QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL 386 (461)
Q Consensus 308 QGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGs-AgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L 386 (461)
.|-.-+|-.|++..++-.+.+++..++||+|+|. .|..+|.++... |. .+.+++++ .
T Consensus 142 ~~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~~~~-------T--- 199 (300)
T 4a26_A 142 PPFTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKE-----NA-------TVTIVHSG-------T--- 199 (300)
T ss_dssp CSCCCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-------S---
T ss_pred CCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC-------C---
Confidence 3444678888999999999999999999999876 899999998752 42 58888762 1
Q ss_pred ChhhhhhccccCCCCCHH--HhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcC
Q 012553 387 QHFKKPWAHEHEPVNNLL--DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLW 446 (461)
Q Consensus 387 ~~~k~~fA~~~~~~~~L~--eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Ls 446 (461)
.+|. ++++. +|++|...+.++.+|.++|+ +--+|+=++
T Consensus 200 --------------~~l~l~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvg 239 (300)
T 4a26_A 200 --------------STEDMIDYLRT--ADIVIAAMGQPGYVKGEWIK------EGAAVVDVG 239 (300)
T ss_dssp --------------CHHHHHHHHHT--CSEEEECSCCTTCBCGGGSC------TTCEEEECC
T ss_pred --------------CCchhhhhhcc--CCEEEECCCCCCCCcHHhcC------CCcEEEEEe
Confidence 1355 88887 99999999999999999874 244665444
No 28
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.03 E-value=0.011 Score=57.72 Aligned_cols=137 Identities=15% Similarity=0.212 Sum_probs=80.8
Q ss_pred HHHHHHHHHH-hcCCCeeeeeecCCcccHHHHHHHHcC------C-Cceecc-C--CCchhHHHHHHHHHHHHHhCCCcc
Q 012553 262 LDEFMSAVKQ-NYGEKVLIQFEDFANHNAFELLAKYGT------T-HLVFND-D--IQGTASVVLAGVVAALKLIGGTLA 330 (461)
Q Consensus 262 idefv~av~~-~fGp~~lIq~EDf~~~~af~iL~ryr~------~-~~~FnD-D--iQGTaaV~LAgll~Alk~~g~~l~ 330 (461)
+.+|++.++. .|.+ ++.-==-...+++++++... - =++.++ | ..|.-.= -.|++.+++-.+.+++
T Consensus 51 l~~~~~~~~~~~~~G---~nVTiP~K~~v~~~lD~l~~~A~~iGAVNTv~~~~~g~l~G~NTD-~~G~~~~l~~~~~~l~ 126 (283)
T 3jyo_A 51 LKTLLDAALYLGFNG---LNITHPYKQAVLPLLDEVSEQATQLGAVNTVVIDATGHTTGHNTD-VSGFGRGMEEGLPNAK 126 (283)
T ss_dssp HHHHHHHHHHTTCCE---EEECTTCTTTTGGGSSEECHHHHHHTCCCEEEECTTSCEEEECHH-HHHHHHHHHHHCTTCC
T ss_pred HHHHHHHHhhCCCCE---EEECcccHHHHHHHhhhCCHHHHHhCcceEEEECCCCeEEEecCC-HHHHHHHHHHhCcCcC
Confidence 5777777664 4543 33322222334444443321 1 133444 4 2453222 4688899988888999
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccc-------cCCCCCH
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-------HEPVNNL 403 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~-------~~~~~~L 403 (461)
+.+++|+|||.+|.+++..+... |. ++|+++|+. .++ .....+.+... .-+..+|
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~-----G~------~~v~i~~R~----~~~---a~~la~~~~~~~~~~~i~~~~~~~l 188 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTH-----GV------QKLQVADLD----TSR---AQALADVINNAVGREAVVGVDARGI 188 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT-----TC------SEEEEECSS----HHH---HHHHHHHHHHHHTSCCEEEECSTTH
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-----CC------CEEEEEECC----HHH---HHHHHHHHHhhcCCceEEEcCHHHH
Confidence 99999999998888888777542 53 579988874 121 11112222211 1123478
Q ss_pred HHhhcccCCcEEEeccCCC
Q 012553 404 LDAVKVIKPTILIGSSGVG 422 (461)
Q Consensus 404 ~eaV~~vkptvLIG~S~~~ 422 (461)
.++++. +|++|-++..+
T Consensus 189 ~~~l~~--~DiVInaTp~G 205 (283)
T 3jyo_A 189 EDVIAA--ADGVVNATPMG 205 (283)
T ss_dssp HHHHHH--SSEEEECSSTT
T ss_pred HHHHhc--CCEEEECCCCC
Confidence 888887 89999877654
No 29
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=95.98 E-value=0.021 Score=57.38 Aligned_cols=115 Identities=20% Similarity=0.235 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHH---------hCCCcccceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCC
Q 012553 313 VVLAGVVAALKL---------IGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSR 382 (461)
Q Consensus 313 V~LAgll~Alk~---------~g~~l~d~riv~~GAGs-AgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R 382 (461)
+|-.|.+-.++- .|.+++..++||+|+|. .|.-+|.++... | .+++++|+...-...|
T Consensus 150 cTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~-----g-------AtVtv~nR~~~~l~~r 217 (320)
T 1edz_A 150 CTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLAND-----G-------ATVYSVDVNNIQKFTR 217 (320)
T ss_dssp HHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTT-----S-------CEEEEECSSEEEEEES
T ss_pred CcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHC-----C-------CEEEEEeCchHHHHhH
Confidence 344455666666 68899999999999995 599998888642 4 3699999976655555
Q ss_pred cCCCChhhhhhccccCC---C--CCHHHhhcccCCcEEEeccCCCCC-CCHHHHHHHhcCCCCcEEEEcCCCCch
Q 012553 383 KDSLQHFKKPWAHEHEP---V--NNLLDAVKVIKPTILIGSSGVGRT-FTKEVIEAMASFNEVVFQALLWLIRKF 451 (461)
Q Consensus 383 ~~~L~~~k~~fA~~~~~---~--~~L~eaV~~vkptvLIG~S~~~g~-Ft~evv~~Ma~~~erPIIF~Lsnp~~~ 451 (461)
.+.+... ++.... . .+|.++++. +|++|+..+.++. +|.++|+ +.-+|+-++.|..+
T Consensus 218 a~~la~~----~~~~t~~~~t~~~~L~e~l~~--ADIVIsAtg~p~~vI~~e~vk------~GavVIDVgi~rD~ 280 (320)
T 1edz_A 218 GESLKLN----KHHVEDLGEYSEDLLKKCSLD--SDVVITGVPSENYKFPTEYIK------EGAVCINFACTKNF 280 (320)
T ss_dssp CCCSSCC----CCEEEEEEECCHHHHHHHHHH--CSEEEECCCCTTCCBCTTTSC------TTEEEEECSSSCCB
T ss_pred HHHHhhh----cccccccccccHhHHHHHhcc--CCEEEECCCCCcceeCHHHcC------CCeEEEEcCCCccc
Confidence 4434311 121100 1 469999998 9999999998887 9999984 24689999999876
No 30
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=95.93 E-value=0.081 Score=54.99 Aligned_cols=178 Identities=12% Similarity=0.155 Sum_probs=111.8
Q ss_pred ChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCccc--HHHHHHHHc---CCC---cee----------ccCCCchhHHHH
Q 012553 254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHN--AFELLAKYG---TTH---LVF----------NDDIQGTASVVL 315 (461)
Q Consensus 254 ~g~~Y~~~idefv~av~~~fGp~~lIq~EDf~~~~--af~iL~ryr---~~~---~~F----------nDDiQGTaaV~L 315 (461)
+..|-..|...|++++.+.-||..-|-=+|++..- ---+.+.|+ ... .++ .+.-.-||-=+.
T Consensus 117 s~~el~r~~r~f~~~l~~~iG~~~dvpA~Dvgt~~~~m~~~~~~y~~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~ 196 (421)
T 2yfq_A 117 SERELEQLSRGWVRGLYKYLGDRIDIPAPDVNTNGQIMSWFVDEYVKLNGERMDIGTFTGKPVAFGGSEGRNEATGFGVA 196 (421)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEEECTTCCHHHHHHHHHHHHHHTTTCCCGGGSCSCCGGGTCCTTCTTHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCCEEecCchhcCCCCCCCcchHHHHH
Confidence 44566778899999999988999999999999742 223556664 211 222 222234666666
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEE-EEcCC-----CccccCCcCCCChh
Q 012553 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSK-----GLIVSSRKDSLQHF 389 (461)
Q Consensus 316 Agll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~-lvDs~-----GLi~~~R~~~L~~~ 389 (461)
-++-.+++..|.+|++.||+|.|.|..|...|++|.+. |. +++ +.|++ |-|++.. .|+..
T Consensus 197 ~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~~~-----Ga-------kvVavsD~~~~~~~G~i~d~~--Gld~~ 262 (421)
T 2yfq_A 197 VVVRESAKRFGIKMEDAKIAVQGFGNVGTFTVKNIERQ-----GG-------KVCAIAEWDRNEGNYALYNEN--GIDFK 262 (421)
T ss_dssp HHHHHHHHHTTCCGGGSCEEEECCSHHHHHHHHHHHHT-----TC-------CEEECCBCCSSSCSBCCBCSS--CCCHH
T ss_pred HHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHHC-----CC-------EEEEEEecCCCccceEEECCC--CCCHH
Confidence 67788888899999999999999999999999988652 52 455 89999 9999864 34332
Q ss_pred h-hhhccccCCC------CCH-HHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcCC-CCc
Q 012553 390 K-KPWAHEHEPV------NNL-LDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLWL-IRK 450 (461)
Q Consensus 390 k-~~fA~~~~~~------~~L-~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Lsn-p~~ 450 (461)
. +.+......+ ..+ .+.+-.++.||||=++. ++.+|++-.+.+ .-.+|.-=+| |++
T Consensus 263 ~l~~~~~~~g~i~~~~~a~~i~~~~~~~~~~DIliP~A~-~n~i~~~~A~~l----~ak~VvEgAN~P~t 327 (421)
T 2yfq_A 263 ELLAYKEANKTLIGFPGAERITDEEFWTKEYDIIVPAAL-ENVITGERAKTI----NAKLVCEAANGPTT 327 (421)
T ss_dssp HHHHHHHHHCC---------------------CEEECSC-SSCSCHHHHTTC----CCSEEECCSSSCSC
T ss_pred HHHHHHHhcCCcccCCCceEeCccchhcCCccEEEEcCC-cCcCCcccHHHc----CCeEEEeCCccccC
Confidence 1 1111111100 001 12234467899997765 558888888776 2455555555 444
No 31
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=95.83 E-value=0.17 Score=52.90 Aligned_cols=174 Identities=16% Similarity=0.113 Sum_probs=115.7
Q ss_pred ChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCcc--cHHHHHHHHc---CC--Ccee----------ccCCCchhHHHHH
Q 012553 254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANH--NAFELLAKYG---TT--HLVF----------NDDIQGTASVVLA 316 (461)
Q Consensus 254 ~g~~Y~~~idefv~av~~~fGp~~lIq~EDf~~~--~af~iL~ryr---~~--~~~F----------nDDiQGTaaV~LA 316 (461)
+..|-..|...|++++.+.-||..-|-=+|++.. .---+.+.|+ .. -.++ ++.-.-||-=+.-
T Consensus 141 s~~Eler~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~vTGkp~~~GGs~~r~~aTg~Gv~~ 220 (440)
T 3aog_A 141 SPGELERLTRRYTSEIGILLGPDRDIPAPDVNTGEREMAWMMDTYSMNVGRTVPGVVTGKPIALGGSLGRRDATGRGVFI 220 (440)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTCTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeEeccchhhCCCCCCCcchHHHHHH
Confidence 4456677889999999998898888888999864 1222455663 11 1222 2333447666677
Q ss_pred HHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEE-EEcCCCccccCCcCCCChhh-hhhc
Q 012553 317 GVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDSLQHFK-KPWA 394 (461)
Q Consensus 317 gll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~-lvDs~GLi~~~R~~~L~~~k-~~fA 394 (461)
++-.+++..|.+|++.||+|.|.|..|...|++|.+. |. +++ +.|++|-|++.. .|+... +.+.
T Consensus 221 ~~~~~~~~~g~~l~g~~vaVqGfGnVG~~~a~~L~e~-----Ga-------kvVavsD~~G~i~dp~--Gld~~~l~~~~ 286 (440)
T 3aog_A 221 TAAAAAEKIGLQVEGARVAIQGFGNVGNAAARAFHDH-----GA-------RVVAVQDHTGTVYNEA--GIDPYDLLRHV 286 (440)
T ss_dssp HHHHHHHHHTCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEECSSCEEECTT--CCCHHHHHHHH
T ss_pred HHHHHHHhcCCCccCCEEEEeccCHHHHHHHHHHHHC-----CC-------EEEEEEcCCcEEECCC--CCCHHHHHHHH
Confidence 7788889999999999999999999999999988653 52 455 999999998864 243321 1111
Q ss_pred cccCC--------CCCHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcCC
Q 012553 395 HEHEP--------VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLWL 447 (461)
Q Consensus 395 ~~~~~--------~~~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Lsn 447 (461)
..... .-+-.+ +-.++.||||=++. ++.+|++-++.+ .-.+|.-=+|
T Consensus 287 ~~~g~i~~y~~a~~i~~~e-i~~~~~DIlvPcA~-~n~i~~~na~~l----~ak~VvEgAN 341 (440)
T 3aog_A 287 QEFGGVRGYPKAEPLPAAD-FWGLPVEFLVPAAL-EKQITEQNAWRI----RARIVAEGAN 341 (440)
T ss_dssp HHTSSSTTCTTSEECCHHH-HTTCCCSEEEECSS-SSCBCTTTGGGC----CCSEEECCSS
T ss_pred HhcCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccchhhHHHc----CCcEEEecCc
Confidence 11100 012234 34578999997766 447887777766 2456665555
No 32
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=95.75 E-value=0.27 Score=51.73 Aligned_cols=178 Identities=14% Similarity=0.113 Sum_probs=119.4
Q ss_pred ChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCccc--HHHHHHHHc---CCCc-ee----------ccCCCchhHHHHHH
Q 012553 254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHN--AFELLAKYG---TTHL-VF----------NDDIQGTASVVLAG 317 (461)
Q Consensus 254 ~g~~Y~~~idefv~av~~~fGp~~lIq~EDf~~~~--af~iL~ryr---~~~~-~F----------nDDiQGTaaV~LAg 317 (461)
+..|...|...||..+.+.+||..=|-=+|++..- ---+.+.|+ ...+ |+ ..--.-||-=+.-+
T Consensus 146 s~~el~r~~r~f~~eL~~~iGp~~DvpApDvGt~~~em~w~~~~y~~~~~~~~g~vTGKp~~~GGs~~r~~aTg~Gv~~~ 225 (456)
T 3r3j_A 146 SENEILKFCQSFMTNLFRYIGPNTDVPAGDIGVGGREIGYLFGQYKKLKNSFEGVLTGKNIKWGGSNIRAEATGYGVVYF 225 (456)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCCSCBSCCGGGTCCTTTTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCCCCHHHHHHHHHHHHhhcCcccceecCCcccccCCCCCCcccchHHHHH
Confidence 45667777788999998888999888899997632 122445554 2221 11 11223467777777
Q ss_pred HHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhh-----
Q 012553 318 VVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP----- 392 (461)
Q Consensus 318 ll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~----- 392 (461)
+-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +=+.+.|++|-|++.. .|+..+..
T Consensus 226 ~~~~~~~~g~~l~g~~VaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~iyd~~--Gld~~~l~~~~~~ 292 (456)
T 3r3j_A 226 AENVLKDLNDNLENKKCLVSGSGNVAQYLVEKLIEK-----GA------IVLTMSDSNGYILEPN--GFTKEQLNYIMDI 292 (456)
T ss_dssp HHHHHHTTTCCSTTCCEEEECCSHHHHHHHHHHHHH-----TC------CBCCEECSSCEEECTT--CCCHHHHHHHHHH
T ss_pred HHHHHHHcCCCccCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC--CCCHHHHHHHHHH
Confidence 888888889999999999999999999999988764 52 3345899999998753 45433221
Q ss_pred ----------hccccCCCC--CHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcCC
Q 012553 393 ----------WAHEHEPVN--NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLWL 447 (461)
Q Consensus 393 ----------fA~~~~~~~--~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Lsn 447 (461)
|+...+... +-.+ +-.++.||||=+.. ++.+|++-++.+-++ .-+||.--||
T Consensus 293 k~~~~~~v~~~~~~~~~a~~v~~~~-i~~~~~DI~iPcA~-~~~I~~~na~~l~~~-~ak~V~EgAN 356 (456)
T 3r3j_A 293 KNNQRLRLKEYLKYSKTAKYFENQK-PWNIPCDIAFPCAT-QNEINENDADLFIQN-KCKMIVEGAN 356 (456)
T ss_dssp HHTSCCCGGGGGGTCSSCEEECSCC-GGGSCCSEEEECSC-TTCBCHHHHHHHHHH-TCCEEECCSS
T ss_pred HHhcCcchhhhhhcCCCceEeCCcc-ccccCccEEEeCCC-ccchhhHHHHHHHhc-CCeEEEecCC
Confidence 111001100 1112 33467999998887 569999999998432 3577777776
No 33
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=95.74 E-value=0.0036 Score=53.78 Aligned_cols=112 Identities=13% Similarity=0.137 Sum_probs=67.9
Q ss_pred chhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCCh
Q 012553 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 388 (461)
Q Consensus 309 GTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~ 388 (461)
|..+|+.+++-.+-+.. +.+|+|+|+|..|..++..+.. .| .+ ++++|+. ..+ ...
T Consensus 4 ~~~sv~~~a~~~~~~~~-----~~~v~iiG~G~iG~~~a~~l~~-----~g------~~-v~v~~r~----~~~---~~~ 59 (144)
T 3oj0_A 4 GKVSIPSIVYDIVRKNG-----GNKILLVGNGMLASEIAPYFSY-----PQ------YK-VTVAGRN----IDH---VRA 59 (144)
T ss_dssp CCCSHHHHHHHHHHHHC-----CCEEEEECCSHHHHHHGGGCCT-----TT------CE-EEEEESC----HHH---HHH
T ss_pred CcccHHHHHHHHHHhcc-----CCEEEEECCCHHHHHHHHHHHh-----CC------CE-EEEEcCC----HHH---HHH
Confidence 33455555544333322 7899999999999988876643 24 23 8888873 111 112
Q ss_pred hhhhhccccCCCCCHHHhhcccCCcEEEeccCCC-CCCCHHHHHHHhcCCCCcEEEEcCCCCchh
Q 012553 389 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVG-RTFTKEVIEAMASFNEVVFQALLWLIRKFN 452 (461)
Q Consensus 389 ~k~~fA~~~~~~~~L~eaV~~vkptvLIG~S~~~-g~Ft~evv~~Ma~~~erPIIF~Lsnp~~~~ 452 (461)
..+.+.-......++.++++. +|++|-+++.+ ..++.+.++ ..-+|+-+++|....
T Consensus 60 ~a~~~~~~~~~~~~~~~~~~~--~Divi~at~~~~~~~~~~~l~------~g~~vid~~~p~~~~ 116 (144)
T 3oj0_A 60 FAEKYEYEYVLINDIDSLIKN--NDVIITATSSKTPIVEERSLM------PGKLFIDLGNPPNIE 116 (144)
T ss_dssp HHHHHTCEEEECSCHHHHHHT--CSEEEECSCCSSCSBCGGGCC------TTCEEEECCSSCSBC
T ss_pred HHHHhCCceEeecCHHHHhcC--CCEEEEeCCCCCcEeeHHHcC------CCCEEEEccCCccCC
Confidence 222221111234678999987 89999776544 245554432 377999999998654
No 34
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=95.70 E-value=0.013 Score=57.31 Aligned_cols=111 Identities=19% Similarity=0.183 Sum_probs=67.5
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhc
Q 012553 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 394 (461)
Q Consensus 315 LAgll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA 394 (461)
-.|++.+++-.+.++++.+++|+|||.+|.++|..|.. .|. ++|+++++. .++.+.+.. .+.
T Consensus 101 ~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~----~~~a~~la~---~~~ 162 (277)
T 3don_A 101 GIGYVNGLKQIYEGIEDAYILILGAGGASKGIANELYK-----IVR------PTLTVANRT----MSRFNNWSL---NIN 162 (277)
T ss_dssp HHHHHHHHHHHSTTGGGCCEEEECCSHHHHHHHHHHHT-----TCC------SCCEEECSC----GGGGTTCCS---CCE
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHHHHHHHH---hcc
Confidence 45677888888999999999999999999888887764 253 578888874 222222221 111
Q ss_pred cccCCCCCHHHhhcccCCcEEEeccCCCCCCCH--HHHHHHhcCCCCcEEEEcC-CCC
Q 012553 395 HEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTK--EVIEAMASFNEVVFQALLW-LIR 449 (461)
Q Consensus 395 ~~~~~~~~L~eaV~~vkptvLIG~S~~~g~Ft~--evv~~Ma~~~erPIIF~Ls-np~ 449 (461)
. ....++.++++. +|++|-++..+ .... +.+ ......+..+|+=|+ ||.
T Consensus 163 ~--~~~~~~~~~~~~--aDiVInaTp~G-m~~~~~~~l-~~~~l~~~~~V~D~vY~P~ 214 (277)
T 3don_A 163 K--INLSHAESHLDE--FDIIINTTPAG-MNGNTDSVI-SLNRLASHTLVSDIVYNPY 214 (277)
T ss_dssp E--ECHHHHHHTGGG--CSEEEECCC--------CCSS-CCTTCCSSCEEEESCCSSS
T ss_pred c--ccHhhHHHHhcC--CCEEEECccCC-CCCCCcCCC-CHHHcCCCCEEEEecCCCC
Confidence 0 112346677776 89999776544 2211 011 112234567888775 774
No 35
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=95.59 E-value=0.08 Score=53.75 Aligned_cols=141 Identities=15% Similarity=0.205 Sum_probs=82.3
Q ss_pred cccHHHHHHHHcCCCceeccCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhc
Q 012553 286 NHNAFELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEET 365 (461)
Q Consensus 286 ~~~af~iL~ryr~~~~~FnDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA 365 (461)
...++.+-++.+....+. .++.+++.+++--+-+..+ ++.+.+++|+|||..|..++..+... |.
T Consensus 127 ~~~a~~~~k~v~~~~~~~----~~~~s~a~~av~~a~~~~~-~l~g~~VlIiGaG~iG~~~a~~l~~~-----G~----- 191 (404)
T 1gpj_A 127 FRRAINLGKRAREETRIS----EGAVSIGSAAVELAERELG-SLHDKTVLVVGAGEMGKTVAKSLVDR-----GV----- 191 (404)
T ss_dssp HHHHHHHHHHHHHHSSTT----CSCCSHHHHHHHHHHHHHS-CCTTCEEEEESCCHHHHHHHHHHHHH-----CC-----
T ss_pred HHHHhhhhccCcchhhhc----CCCccHHHHHHHHHHHHhc-cccCCEEEEEChHHHHHHHHHHHHHC-----CC-----
Confidence 344677766665321111 1233344343322222222 57889999999999999999988643 63
Q ss_pred cceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhcccCCcEEEeccCCC-CCCCHHHHHH--Hh-cCCCCcE
Q 012553 366 RKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVG-RTFTKEVIEA--MA-SFNEVVF 441 (461)
Q Consensus 366 ~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkptvLIG~S~~~-g~Ft~evv~~--Ma-~~~erPI 441 (461)
++|+++|+. ..| .....+.+--+.-...++.++++. +|++|-+++.+ ..++++.++. |. +...+-+
T Consensus 192 -~~V~v~~r~----~~r---a~~la~~~g~~~~~~~~l~~~l~~--aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v 261 (404)
T 1gpj_A 192 -RAVLVANRT----YER---AVELARDLGGEAVRFDELVDHLAR--SDVVVSATAAPHPVIHVDDVREALRKRDRRSPIL 261 (404)
T ss_dssp -SEEEEECSS----HHH---HHHHHHHHTCEECCGGGHHHHHHT--CSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEE
T ss_pred -CEEEEEeCC----HHH---HHHHHHHcCCceecHHhHHHHhcC--CCEEEEccCCCCceecHHHHHHHHHhccCCCCEE
Confidence 579988873 111 111111221111122467888875 89999876654 3568888987 43 2334567
Q ss_pred EEEcCCCCch
Q 012553 442 QALLWLIRKF 451 (461)
Q Consensus 442 IF~Lsnp~~~ 451 (461)
++-++.|...
T Consensus 262 ~vdia~P~~i 271 (404)
T 1gpj_A 262 IIDIANPRDV 271 (404)
T ss_dssp EEECCSSCSB
T ss_pred EEEccCCCCC
Confidence 8889998753
No 36
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=95.52 E-value=0.024 Score=56.13 Aligned_cols=99 Identities=15% Similarity=0.247 Sum_probs=75.7
Q ss_pred chhHHHHHHHHHHHHHhCCCcccceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCC
Q 012553 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 387 (461)
Q Consensus 309 GTaaV~LAgll~Alk~~g~~l~d~riv~~GAGs-AgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~ 387 (461)
+-.-+|-.|++-.++-.+.+++..++|++|+|. .|.-+|.++.. .|. ...+++++++
T Consensus 136 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~-----~g~-----~atVtv~h~~------------ 193 (281)
T 2c2x_A 136 APLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTR-----RSE-----NATVTLCHTG------------ 193 (281)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTS-----TTT-----CCEEEEECTT------------
T ss_pred CCCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhc-----CCC-----CCEEEEEECc------------
Confidence 445567788899999999999999999999996 59888887743 210 2367777532
Q ss_pred hhhhhhccccCCCCCHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcCCCC
Q 012553 388 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLWLIR 449 (461)
Q Consensus 388 ~~k~~fA~~~~~~~~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Lsnp~ 449 (461)
..+|.+.++. +|++|+..+.++.+|+++|+. .-+|+=++-|+
T Consensus 194 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk~------GavVIDVgi~r 235 (281)
T 2c2x_A 194 ------------TRDLPALTRQ--ADIVVAAVGVAHLLTADMVRP------GAAVIDVGVSR 235 (281)
T ss_dssp ------------CSCHHHHHTT--CSEEEECSCCTTCBCGGGSCT------TCEEEECCEEE
T ss_pred ------------hhHHHHHHhh--CCEEEECCCCCcccCHHHcCC------CcEEEEccCCC
Confidence 1469999997 999999999999999999852 45777666554
No 37
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=95.35 E-value=0.022 Score=56.63 Aligned_cols=112 Identities=14% Similarity=0.180 Sum_probs=72.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCC---CCHHHhhc
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV---NNLLDAVK 408 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~---~~L~eaV~ 408 (461)
.||.|+|||+.|.++|.++... |+ -+++++|.+-=..+.-...+.+.. .+....... .++.++++
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~-----g~------~~V~L~D~~~~~~~~~~~~l~~~~-~~~~~~~~i~~t~d~~ea~~ 77 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR-----EL------ADVVLYDVVKGMPEGKALDLSHVT-SVVDTNVSVRAEYSYEAALT 77 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSSSHHHHHHHHHHHHH-HHTTCCCCEEEECSHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEECChhHHHHHHHHHHhhh-hccCCCCEEEEeCCHHHHhC
Confidence 5899999999999999988763 54 139999985210000000011111 111111112 57888998
Q ss_pred ccCCcEEEeccCCC---CC----------------CCHHHHHHHhcCCCCcEEEEcCCCCchhhhhhhh
Q 012553 409 VIKPTILIGSSGVG---RT----------------FTKEVIEAMASFNEVVFQALLWLIRKFNFCSLFK 458 (461)
Q Consensus 409 ~vkptvLIG~S~~~---g~----------------Ft~evv~~Ma~~~erPIIF~Lsnp~~~~~~~~~~ 458 (461)
+ +|++|=+.+.+ |. +-+++.+.|.+++..-+|+--|||..++ |.+.+
T Consensus 78 ~--aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~~~~-t~~~~ 143 (331)
T 1pzg_A 78 G--ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLDCM-VKVMC 143 (331)
T ss_dssp T--CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHH-HHHHH
T ss_pred C--CCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCchHHH-HHHHH
Confidence 7 89998655333 32 2478888999999888988889999987 66654
No 38
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.16 E-value=0.025 Score=56.41 Aligned_cols=91 Identities=23% Similarity=0.293 Sum_probs=58.1
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhc
Q 012553 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 394 (461)
Q Consensus 315 LAgll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA 394 (461)
-.|++.+++-.|.++++.+++|+|||.+|.+||..+.. .|. ++|+++++.+ .+.+......+.+.
T Consensus 138 ~~Gf~~~L~~~~~~l~gk~~lVlGaGG~g~aia~~L~~-----~Ga------~~V~i~nR~~----~~~~~a~~la~~~~ 202 (315)
T 3tnl_A 138 GTGYMRALKEAGHDIIGKKMTICGAGGAATAICIQAAL-----DGV------KEISIFNRKD----DFYANAEKTVEKIN 202 (315)
T ss_dssp HHHHHHHHHHTTCCCTTSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECSS----TTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCccCCEEEEECCChHHHHHHHHHHH-----CCC------CEEEEEECCC----chHHHHHHHHHHhh
Confidence 46788888888999999999999999888888877764 253 5899998852 10011111111221
Q ss_pred cc------cCCC---CCHHHhhcccCCcEEEeccCCC
Q 012553 395 HE------HEPV---NNLLDAVKVIKPTILIGSSGVG 422 (461)
Q Consensus 395 ~~------~~~~---~~L~eaV~~vkptvLIG~S~~~ 422 (461)
.. .... .+|.++++. +|++|-++..|
T Consensus 203 ~~~~~~~~~~~~~~~~~l~~~l~~--aDiIINaTp~G 237 (315)
T 3tnl_A 203 SKTDCKAQLFDIEDHEQLRKEIAE--SVIFTNATGVG 237 (315)
T ss_dssp HHSSCEEEEEETTCHHHHHHHHHT--CSEEEECSSTT
T ss_pred hhcCCceEEeccchHHHHHhhhcC--CCEEEECccCC
Confidence 10 0011 235667776 99999777654
No 39
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=95.15 E-value=0.014 Score=56.29 Aligned_cols=118 Identities=19% Similarity=0.241 Sum_probs=73.5
Q ss_pred hHHHhhCCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHH-hcCCCeeeeeecCCcccHH
Q 012553 212 ALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQ-NYGEKVLIQFEDFANHNAF 290 (461)
Q Consensus 212 ~Ly~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~-~fGp~~lIq~EDf~~~~af 290 (461)
..|.++ ||| ...+.+|+. .++ +.++++.++. .|++ ++..==-...++
T Consensus 32 ~~~~~~-gi~---~~y~~~~~~--~~~-----------------------l~~~i~~l~~~~~~G---~nVtiP~k~~i~ 79 (287)
T 1nvt_A 32 AAFKDK-GLN---YVYVAFDVL--PEN-----------------------LKYVIDGAKALGIVG---FNVTIPHKIEIM 79 (287)
T ss_dssp HHHHHT-TCC---EEEEEEECC--GGG-----------------------GGGHHHHHHHHTCCE---EEECTTSTTGGG
T ss_pred HHHHHc-CCC---cEEEEEEcC--HHH-----------------------HHHHHHHHHhCCCCE---EEEccCCHHHHH
Confidence 356666 798 777888874 222 4556666654 5655 555433333334
Q ss_pred HHHHH-------HcC-CCceeccC-CCchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCC
Q 012553 291 ELLAK-------YGT-THLVFNDD-IQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAP 361 (461)
Q Consensus 291 ~iL~r-------yr~-~~~~FnDD-iQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls 361 (461)
.++++ ..- +..+++|. ..|+-. ...|++.+++..+.++++.+++|.|||.+|.++|..+...
T Consensus 80 ~~~d~~~~~a~~igavnt~~~~~g~l~g~nT-d~~G~~~~L~~~~~~l~~k~vlV~GaGgiG~aia~~L~~~-------- 150 (287)
T 1nvt_A 80 KYLDEIDKDAQLIGAVNTIKIEDGKAIGYNT-DGIGARMALEEEIGRVKDKNIVIYGAGGAARAVAFELAKD-------- 150 (287)
T ss_dssp GGCSEECHHHHHHTCCCEEEEETTEEEEECC-HHHHHHHHHHHHHCCCCSCEEEEECCSHHHHHHHHHHTSS--------
T ss_pred HHHHhcCHHHHHhCceeeEEeeCCEEEEecC-CHHHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHHC--------
Confidence 33331 111 22334444 246322 6789999999888899999999999997777777766431
Q ss_pred hhhccceEEEEcCC
Q 012553 362 VEETRKKICLVDSK 375 (461)
Q Consensus 362 ~eeA~~~i~lvDs~ 375 (461)
- +++++|++
T Consensus 151 ----G-~V~v~~r~ 159 (287)
T 1nvt_A 151 ----N-NIIIANRT 159 (287)
T ss_dssp ----S-EEEEECSS
T ss_pred ----C-CEEEEECC
Confidence 2 78888874
No 40
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=95.15 E-value=0.64 Score=48.22 Aligned_cols=175 Identities=17% Similarity=0.122 Sum_probs=112.9
Q ss_pred ChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCccc--HHHHHHHHc---CC--Cceecc----------CCCchhHHHHH
Q 012553 254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHN--AFELLAKYG---TT--HLVFND----------DIQGTASVVLA 316 (461)
Q Consensus 254 ~g~~Y~~~idefv~av~~~fGp~~lIq~EDf~~~~--af~iL~ryr---~~--~~~FnD----------DiQGTaaV~LA 316 (461)
+.+|-..|...|++++.+.-||..-|-=+|++..- ---+.+.|+ .. ..++-- .-.-||-=+.-
T Consensus 115 s~~e~~r~~r~f~~~l~~~ig~~~dvpa~D~gt~~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~ 194 (415)
T 2tmg_A 115 SRRELERLSRRFFREIQVIIGPYNDIPAPDVNTNADVIAWYMDEYEMNVGHTVLGIVTGKPVELGGSKGREEATGRGVKV 194 (415)
T ss_dssp CHHHHHHHHHHHHHHTGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHSSCCCCSCSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCcEEeCCCCCCCHHHHHHHHHHHHHhhCCCCCCeEecCchhhCCCCCcCcchHHHHHH
Confidence 34566778899999999988888888889998642 122345552 21 123322 22336666666
Q ss_pred HHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEE-EEcCCCccccCCcCCCChhh-hhhc
Q 012553 317 GVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDSLQHFK-KPWA 394 (461)
Q Consensus 317 gll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~-lvDs~GLi~~~R~~~L~~~k-~~fA 394 (461)
++-.+++..|.++++.||+|.|.|..|...|++|.+. .|. +++ +.|++|-+++.. .++... +.+.
T Consensus 195 ~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~e~----~Ga-------kvVavsD~~G~i~dp~--Gld~~~l~~~~ 261 (415)
T 2tmg_A 195 CAGLAMDVLGIDPKKATVAVQGFGNVGQFAALLISQE----LGS-------KVVAVSDSRGGIYNPE--GFDVEELIRYK 261 (415)
T ss_dssp HHHHHHHHTTCCTTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEEECSSCEEECTT--CCCHHHHHHHH
T ss_pred HHHHHHHHcCCCcCCCEEEEECCcHHHHHHHHHHHHh----cCC-------EEEEEEeCCCeEECCC--CCCHHHHHHHH
Confidence 7778888899999999999999999999999988650 252 455 899999988764 344321 1111
Q ss_pred cccCCC--------CCHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcCC
Q 012553 395 HEHEPV--------NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLWL 447 (461)
Q Consensus 395 ~~~~~~--------~~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Lsn 447 (461)
.....+ -+-.| +-.++.|+||=++. ++.+|++-.+.+ .-.+|.-=+|
T Consensus 262 ~~~g~l~~y~~a~~~~~~e-il~~~~DIliP~A~-~n~i~~~~a~~l----~ak~V~EgAN 316 (415)
T 2tmg_A 262 KEHGTVVTYPKGERITNEE-LLELDVDILVPAAL-EGAIHAGNAERI----KAKAVVEGAN 316 (415)
T ss_dssp HHSSCSTTCSSSEEECHHH-HTTCSCSEEEECSS-TTSBCHHHHTTC----CCSEEECCSS
T ss_pred HhhCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccCcccHHHc----CCeEEEeCCC
Confidence 111100 12233 44568899997766 447888777665 2445555555
No 41
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.07 E-value=0.028 Score=56.02 Aligned_cols=91 Identities=25% Similarity=0.310 Sum_probs=58.2
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhc
Q 012553 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 394 (461)
Q Consensus 315 LAgll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA 394 (461)
-.|++.+++-.|.++++.+++|+|||.||.+|+..|.. .|. ++|+++++. ..+.+......+.+.
T Consensus 132 ~~Gf~~~L~~~~~~l~gk~~lVlGAGGaaraia~~L~~-----~G~------~~v~v~nRt----~~~~~~a~~la~~~~ 196 (312)
T 3t4e_A 132 GTGHIRAIKESGFDMRGKTMVLLGAGGAATAIGAQAAI-----EGI------KEIKLFNRK----DDFFEKAVAFAKRVN 196 (312)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS----STHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----cCC------CEEEEEECC----CchHHHHHHHHHHhh
Confidence 35778888888889999999999999998888887765 253 589988874 111111111111221
Q ss_pred cc------cCCCCCH---HHhhcccCCcEEEeccCCC
Q 012553 395 HE------HEPVNNL---LDAVKVIKPTILIGSSGVG 422 (461)
Q Consensus 395 ~~------~~~~~~L---~eaV~~vkptvLIG~S~~~ 422 (461)
.. ..+..++ .+.++. +|++|-++..+
T Consensus 197 ~~~~~~v~~~~~~~l~~~~~~l~~--~DiIINaTp~G 231 (312)
T 3t4e_A 197 ENTDCVVTVTDLADQHAFTEALAS--ADILTNGTKVG 231 (312)
T ss_dssp HHSSCEEEEEETTCHHHHHHHHHH--CSEEEECSSTT
T ss_pred hccCcceEEechHhhhhhHhhccC--ceEEEECCcCC
Confidence 11 0112344 566776 89999877655
No 42
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=95.07 E-value=0.022 Score=55.66 Aligned_cols=87 Identities=23% Similarity=0.257 Sum_probs=57.4
Q ss_pred HHHHHHHHHhC-CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhc
Q 012553 316 AGVVAALKLIG-GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 394 (461)
Q Consensus 316 Agll~Alk~~g-~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA 394 (461)
.|++.+++..+ .+++..+++|+|||.+|.++|..|.. .|. ++|+++|+. .+| .....+.+.
T Consensus 125 ~G~~~~l~~~~~~~l~~~~vlVlGaGg~g~aia~~L~~-----~G~------~~V~v~nR~----~~k---a~~la~~~~ 186 (297)
T 2egg_A 125 LGYVQALEEEMNITLDGKRILVIGAGGGARGIYFSLLS-----TAA------ERIDMANRT----VEK---AERLVREGD 186 (297)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC------SEEEEECSS----HHH---HHHHHHHSC
T ss_pred HHHHHHHHHhCCCCCCCCEEEEECcHHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHH---HHHHHHHhh
Confidence 78888888877 78899999999999999998887754 253 578988874 111 111111221
Q ss_pred c---ccCCCCCHHHhhcccCCcEEEeccCCC
Q 012553 395 H---EHEPVNNLLDAVKVIKPTILIGSSGVG 422 (461)
Q Consensus 395 ~---~~~~~~~L~eaV~~vkptvLIG~S~~~ 422 (461)
. ......++.++++. +|++|-+++.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~--aDivIn~t~~~ 215 (297)
T 2egg_A 187 ERRSAYFSLAEAETRLAE--YDIIINTTSVG 215 (297)
T ss_dssp SSSCCEECHHHHHHTGGG--CSEEEECSCTT
T ss_pred hccCceeeHHHHHhhhcc--CCEEEECCCCC
Confidence 1 00011246677766 99999887755
No 43
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=95.03 E-value=0.0087 Score=58.59 Aligned_cols=110 Identities=14% Similarity=0.156 Sum_probs=64.2
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccC-CCCCHHHhhcccC
Q 012553 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHE-PVNNLLDAVKVIK 411 (461)
Q Consensus 333 riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~-~~~~L~eaV~~vk 411 (461)
||.|+|||+.|.++|..+.. .|+ ...++++|.+---.......+.+.. +|..... ...+ .++++.
T Consensus 2 kI~VIGaG~vG~~la~~la~-----~g~-----~~eV~L~D~~~~~~~~~~~~l~~~~-~~~~~~~i~~~~-~~a~~~-- 67 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVL-----RGS-----CSELVLVDRDEDRAQAEAEDIAHAA-PVSHGTRVWHGG-HSELAD-- 67 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSSHHHHHHHHHHHTTSC-CTTSCCEEEEEC-GGGGTT--
T ss_pred EEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCCHHHHHHHHHhhhhhh-hhcCCeEEEECC-HHHhCC--
Confidence 89999999999999987754 254 2479999985210000000011100 1111100 0023 367776
Q ss_pred CcEEEeccCCCCC--------------CCHHHHHHHhcCCCCcEEEEcCCCCchhhhhhh
Q 012553 412 PTILIGSSGVGRT--------------FTKEVIEAMASFNEVVFQALLWLIRKFNFCSLF 457 (461)
Q Consensus 412 ptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIF~Lsnp~~~~~~~~~ 457 (461)
+|++|=+.+.+.. +-+++++.|++++..-+|+-.+||...+ |..+
T Consensus 68 aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~~~-~~~~ 126 (304)
T 2v6b_A 68 AQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVDLL-TDLA 126 (304)
T ss_dssp CSEEEECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHHHH-HHHH
T ss_pred CCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchHHH-HHHH
Confidence 8998865544321 2278888898888887888899999876 4433
No 44
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=94.91 E-value=0.57 Score=49.48 Aligned_cols=177 Identities=13% Similarity=0.129 Sum_probs=117.1
Q ss_pred ChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCccc--HHHHHHHHc---CC-Ccee----------ccCCCchhHHHHHH
Q 012553 254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHN--AFELLAKYG---TT-HLVF----------NDDIQGTASVVLAG 317 (461)
Q Consensus 254 ~g~~Y~~~idefv~av~~~fGp~~lIq~EDf~~~~--af~iL~ryr---~~-~~~F----------nDDiQGTaaV~LAg 317 (461)
+..|-..|...||..+.+..||..=|-=+|++..- ---+.+.|+ .. -.|+ .++-.-||-=+.-+
T Consensus 159 S~~El~r~~r~f~~~L~~~iGp~~DvpApDvGt~~~em~~~~~~y~~~~~~~~gvvTGKp~~~GGs~~r~~aTg~Gv~~~ 238 (470)
T 2bma_A 159 SDNEILKFCQAFMNELYRHIGPCTDVPAGDIGVGGREIGYLYGQYKKIVNSFNGTLTGKNVKWGGSNLRVEATGYGLVYF 238 (470)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCSSCCHHHHHHHHHHHHHHHCCCSCSSSSCCGGGTCCTTTTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhhccCCCCCccCCCCCCChHHHHHHHHHHHHhcCCcccEEeCCCccCCCCCCccccchHHHHHH
Confidence 34566677778999999888998888899998632 122445554 21 1111 11223466666667
Q ss_pred HHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEE-EEcCCCccccCCcCCCChhh------
Q 012553 318 VVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDSLQHFK------ 390 (461)
Q Consensus 318 ll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~-lvDs~GLi~~~R~~~L~~~k------ 390 (461)
+-.+++..|.+|++.||+|-|.|..|...|+.+.+. |. +++ +.|++|-|++.. .++..+
T Consensus 239 ~~~~l~~~G~~l~g~~vaVqG~GnVG~~~a~~L~~~-----Ga-------kvVavsD~~G~i~dp~--Gid~edl~~l~~ 304 (470)
T 2bma_A 239 VLEVLKSLNIPVEKQTAVVSGSGNVALYCVQKLLHL-----NV-------KVLTLSDSNGYVYEPN--GFTHENLEFLID 304 (470)
T ss_dssp HHHHHHTTTCCGGGCEEEEECSSHHHHHHHHHHHHT-----TC-------EECEEEETTEEEECSS--CCCHHHHHHHHH
T ss_pred HHHHHHhccCCcCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEEeCCceEECCC--CCCHHHHHHHHH
Confidence 788888899999999999999999999999988653 52 455 889998888753 353321
Q ss_pred ---------hhhccccCCCC--CHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcCC
Q 012553 391 ---------KPWAHEHEPVN--NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLWL 447 (461)
Q Consensus 391 ---------~~fA~~~~~~~--~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Lsn 447 (461)
..|+...+... +-.+.. .++.||||=+.. ++.+|++-++.+-+ +.-.||.-=||
T Consensus 305 ~k~~~~g~v~~~~~~~~~a~~v~~~~~~-~~~~DI~iPcA~-~~~I~~~na~~l~~-~~ak~V~EgAN 369 (470)
T 2bma_A 305 LKEEKKGRIKEYLNHSSTAKYFPNEKPW-GVPCTLAFPCAT-QNDVDLDQAKLLQK-NGCILVGEGAN 369 (470)
T ss_dssp HHTTTTCCGGGGGGTCSSCEECSSCCTT-SSCCSEEEECSS-TTCBCSHHHHHHHH-TTCCEEECCSS
T ss_pred HHHhcCCcHHHHHhhcCCcEEecCcCee-ecCccEEEeccc-cCcCCHHHHHHHHh-cCcEEEEeCCC
Confidence 11221000000 001222 568999998886 56999999999854 34567777776
No 45
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=94.86 E-value=0.04 Score=55.08 Aligned_cols=95 Identities=18% Similarity=0.228 Sum_probs=62.8
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcccc----CCCCCHH
Q 012553 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLL 404 (461)
Q Consensus 329 l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~----~~~~~L~ 404 (461)
++..+++|+|||.+|.+++..+... | | +++++|+. ..| +...++.++... ....++.
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~-----G-----a--~V~v~dr~----~~r---~~~~~~~~~~~~~~~~~~~~~~~ 225 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGL-----G-----A--QVQIFDIN----VER---LSYLETLFGSRVELLYSNSAEIE 225 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT-----T-----C--EEEEEESC----HHH---HHHHHHHHGGGSEEEECCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-----C-----C--EEEEEeCC----HHH---HHHHHHhhCceeEeeeCCHHHHH
Confidence 6678999999999999999887542 5 3 68888874 111 222222232210 0113567
Q ss_pred HhhcccCCcEEEeccCCCCC-----CCHHHHHHHhcCCCCcEEEEcCC
Q 012553 405 DAVKVIKPTILIGSSGVGRT-----FTKEVIEAMASFNEVVFQALLWL 447 (461)
Q Consensus 405 eaV~~vkptvLIG~S~~~g~-----Ft~evv~~Ma~~~erPIIF~Lsn 447 (461)
+.++. .|++|.+++.++. ++++.++.|.+ .-+|+-++.
T Consensus 226 ~~~~~--~DvVI~~~~~~~~~~~~li~~~~~~~~~~---g~~ivdv~~ 268 (361)
T 1pjc_A 226 TAVAE--ADLLIGAVLVPGRRAPILVPASLVEQMRT---GSVIVDVAV 268 (361)
T ss_dssp HHHHT--CSEEEECCCCTTSSCCCCBCHHHHTTSCT---TCEEEETTC
T ss_pred HHHcC--CCEEEECCCcCCCCCCeecCHHHHhhCCC---CCEEEEEec
Confidence 77775 8999998876542 68999988864 456666664
No 46
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=94.78 E-value=0.024 Score=56.20 Aligned_cols=108 Identities=15% Similarity=0.146 Sum_probs=69.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcC----CCChhhhhhcccc--CCCCCHHH
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD----SLQHFKKPWAHEH--EPVNNLLD 405 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~----~L~~~k~~fA~~~--~~~~~L~e 405 (461)
.||.|+|||+.|.++|.+++.. |+ + +++++|.+- ++-+ .+.+...+..... ....++ +
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~-----g~----~--~v~L~Di~~----~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~ 68 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK-----NL----G--DVVLFDIVK----NMPHGKALDTSHTNVMAYSNCKVSGSNTY-D 68 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC----C--EEEEECSSS----SHHHHHHHHHHTHHHHHTCCCCEEEECCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC----C--eEEEEeCCH----HHHHHHHHHHHhhhhhcCCCcEEEECCCH-H
Confidence 4899999999999999888753 54 1 399999751 1110 0111100111110 011467 8
Q ss_pred hhcccCCcEEEeccCCC---CC----------------CCHHHHHHHhcCCCCcEEEEcCCCCchhhhhhhh
Q 012553 406 AVKVIKPTILIGSSGVG---RT----------------FTKEVIEAMASFNEVVFQALLWLIRKFNFCSLFK 458 (461)
Q Consensus 406 aV~~vkptvLIG~S~~~---g~----------------Ft~evv~~Ma~~~erPIIF~Lsnp~~~~~~~~~~ 458 (461)
++++ +|++|=+.+.+ |. +-+++.+.|.+++..-+|+-.|||..++ |.+..
T Consensus 69 al~~--aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP~~~~-t~~~~ 137 (322)
T 1t2d_A 69 DLAG--ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDVM-VQLLH 137 (322)
T ss_dssp GGTT--CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHHHH-HHHHH
T ss_pred HhCC--CCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCChHHH-HHHHH
Confidence 8887 89998554333 21 4577888888888888887789999987 66553
No 47
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=94.76 E-value=0.047 Score=53.32 Aligned_cols=101 Identities=12% Similarity=0.152 Sum_probs=67.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhh------hhhccccCC---CCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK------KPWAHEHEP---VNN 402 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k------~~fA~~~~~---~~~ 402 (461)
.||.|+|||+.|.++|..++.. |+ .+++++|.+- ++ +.... ..+...... ..+
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~-----g~------~~V~l~D~~~----~~---~~~~~~~l~~~~~~~~~~~~i~~t~d 66 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD-----NL------ADVVLFDIAE----GI---PQGKALDITHSMVMFGSTSKVIGTDD 66 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSS----SH---HHHHHHHHHHHHHHHTCCCCEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------ceEEEEeCCc----hH---HHHHHHHHHhhhhhcCCCcEEEECCC
Confidence 5899999999999999998764 54 1499999852 11 11110 011110111 145
Q ss_pred HHHhhcccCCcEEEeccCCCC--------------CCCHHHHHHHhcCCCCcEEEEcCCCCchhh
Q 012553 403 LLDAVKVIKPTILIGSSGVGR--------------TFTKEVIEAMASFNEVVFQALLWLIRKFNF 453 (461)
Q Consensus 403 L~eaV~~vkptvLIG~S~~~g--------------~Ft~evv~~Ma~~~erPIIF~Lsnp~~~~~ 453 (461)
+ ++++. +|++|=+.+.+. .+.+++++.+.+++..-||+-.|||..++.
T Consensus 67 ~-~a~~~--aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~~~~ 128 (317)
T 2ewd_A 67 Y-ADISG--SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLDVMV 128 (317)
T ss_dssp G-GGGTT--CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHH
T ss_pred H-HHhCC--CCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHHHHH
Confidence 6 77876 899886554332 134678888888888899999999998864
No 48
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=94.69 E-value=0.13 Score=54.26 Aligned_cols=113 Identities=15% Similarity=0.171 Sum_probs=78.0
Q ss_pred cCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcC
Q 012553 305 DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD 384 (461)
Q Consensus 305 DDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~ 384 (461)
+.+.|+......|+ .+.++..+.+.+++|+|.|..|.++|+.+... |. +++.+|+...-.
T Consensus 234 r~~~~~~~~l~~gw---~r~~~~~l~GktVgIIG~G~IG~~vA~~l~~~-----G~-------~Viv~d~~~~~~----- 293 (479)
T 1v8b_A 234 DNVYGCRHSLPDGL---MRATDFLISGKIVVICGYGDVGKGCASSMKGL-----GA-------RVYITEIDPICA----- 293 (479)
T ss_dssp HHHHHHHHHHHHHH---HHHHCCCCTTSEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSCHHHH-----
T ss_pred hchHhHHHHHhhhh---hhccccccCCCEEEEEeeCHHHHHHHHHHHhC-----cC-------EEEEEeCChhhH-----
Confidence 34455555556662 35678899999999999999999999998653 53 688888752100
Q ss_pred CCChhhhhhccccCCCCCHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcCCC
Q 012553 385 SLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLWLI 448 (461)
Q Consensus 385 ~L~~~k~~fA~~~~~~~~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Lsnp 448 (461)
+ ..+...-...+|.|+++. .|++|......+.++++.++.|.+ .-||.=.+-.
T Consensus 294 -~-----~a~~~g~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK~---gailiNvgrg 346 (479)
T 1v8b_A 294 -I-----QAVMEGFNVVTLDEIVDK--GDFFITCTGNVDVIKLEHLLKMKN---NAVVGNIGHF 346 (479)
T ss_dssp -H-----HHHTTTCEECCHHHHTTT--CSEEEECCSSSSSBCHHHHTTCCT---TCEEEECSST
T ss_pred -H-----HHHHcCCEecCHHHHHhc--CCEEEECCChhhhcCHHHHhhcCC---CcEEEEeCCC
Confidence 0 000111112479999987 999999877778999999998865 5566655543
No 49
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=94.65 E-value=0.071 Score=51.12 Aligned_cols=108 Identities=18% Similarity=0.251 Sum_probs=67.5
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhc
Q 012553 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 394 (461)
Q Consensus 315 LAgll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA 394 (461)
..|++.+++-.|..+++.+++|+|+|.+|.++|..+... | . +++++|+.- ++ .....+.+.
T Consensus 113 ~~G~~~~l~~~~~~~~~~~v~iiGaG~~g~aia~~L~~~-----g------~-~V~v~~r~~----~~---~~~l~~~~g 173 (275)
T 2hk9_A 113 WIGFLKSLKSLIPEVKEKSILVLGAGGASRAVIYALVKE-----G------A-KVFLWNRTK----EK---AIKLAQKFP 173 (275)
T ss_dssp HHHHHHHHHHHCTTGGGSEEEEECCSHHHHHHHHHHHHH-----T------C-EEEEECSSH----HH---HHHHTTTSC
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHHc-----C------C-EEEEEECCH----HH---HHHHHHHcC
Confidence 348888888888899999999999999999999888653 4 2 788888741 11 111111110
Q ss_pred cccCCCCCHHHhhcccCCcEEEeccCCCCCCC--HHHHHHHhcCCCCcEEEEcCC
Q 012553 395 HEHEPVNNLLDAVKVIKPTILIGSSGVGRTFT--KEVIEAMASFNEVVFQALLWL 447 (461)
Q Consensus 395 ~~~~~~~~L~eaV~~vkptvLIG~S~~~g~Ft--~evv~~Ma~~~erPIIF~Lsn 447 (461)
.....++.++++. +|++|-+...+ ... ++.+. .....+..+|+-++.
T Consensus 174 --~~~~~~~~~~~~~--aDiVi~atp~~-~~~~~~~~i~-~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 174 --LEVVNSPEEVIDK--VQVIVNTTSVG-LKDEDPEIFN-YDLIKKDHVVVDIIY 222 (275)
T ss_dssp --EEECSCGGGTGGG--CSEEEECSSTT-SSTTCCCSSC-GGGCCTTSEEEESSS
T ss_pred --CeeehhHHhhhcC--CCEEEEeCCCC-CCCCCCCCCC-HHHcCCCCEEEEcCC
Confidence 0111267788876 99999776544 221 11221 112234567777776
No 50
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=94.62 E-value=0.023 Score=56.46 Aligned_cols=112 Identities=18% Similarity=0.206 Sum_probs=67.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcccc--CCCCCHHHhhcc
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVKV 409 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~--~~~~~L~eaV~~ 409 (461)
.||.|+|||+.|.++|..++.. |+ + +++++|.+-=..+.-...+.+...++.... ....++ +++++
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~-----g~----~--~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~ 82 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQK-----DL----G--DVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQN 82 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC----C--EEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC----C--eEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCC
Confidence 5899999999999999877652 54 1 399999852100000000111111111110 011456 78887
Q ss_pred cCCcEEEeccCCC---CC-----------CCHHHHHHHhcCCCCcEEEEcCCCCchhhhhhhh
Q 012553 410 IKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEVVFQALLWLIRKFNFCSLFK 458 (461)
Q Consensus 410 vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIF~Lsnp~~~~~~~~~~ 458 (461)
+|++|=+.+.+ |. +-+++.+.+.+++..-+|+--|||...+ |...+
T Consensus 83 --aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~~~~-t~~~~ 142 (328)
T 2hjr_A 83 --SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNPLDAM-VYYFK 142 (328)
T ss_dssp --CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHH-HHHHH
T ss_pred --CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecCchHHH-HHHHH
Confidence 89988554332 21 2567888888888887877779999987 65554
No 51
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=94.32 E-value=0.056 Score=52.51 Aligned_cols=104 Identities=11% Similarity=0.062 Sum_probs=64.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCCh---hhhhhcc-ccCC-CCCHHHh
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH---FKKPWAH-EHEP-VNNLLDA 406 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~---~k~~fA~-~~~~-~~~L~ea 406 (461)
.||.|+|||+.|.++|..+... |+ ...++++|.+- ++.+.+.. +-..+.. ...- ..++ ++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~-----g~-----~~~V~l~d~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~ 66 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQ-----GV-----ADDYVFIDANE----AKVKADQIDFQDAMANLEAHGNIVINDW-AA 66 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSH----HHHHHHHHHHHHHGGGSSSCCEEEESCG-GG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEcCCH----HHHHHHHHHHHhhhhhcCCCeEEEeCCH-HH
Confidence 3899999999999999988653 54 24799999841 11111110 0001110 0000 2456 77
Q ss_pred hcccCCcEEEeccCCC-------CCC-----------CHHHHHHHhcCCCCcEEEEcCCCCchh
Q 012553 407 VKVIKPTILIGSSGVG-------RTF-----------TKEVIEAMASFNEVVFQALLWLIRKFN 452 (461)
Q Consensus 407 V~~vkptvLIG~S~~~-------g~F-----------t~evv~~Ma~~~erPIIF~Lsnp~~~~ 452 (461)
++. +|++|=+...+ |.. -+++++.+.+++...+|+-++||...+
T Consensus 67 ~~~--aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~~~ 128 (309)
T 1hyh_A 67 LAD--ADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNPVDVI 128 (309)
T ss_dssp GTT--CSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHH
T ss_pred hCC--CCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCcHHHH
Confidence 776 89888554432 211 268888998888788888899999874
No 52
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=94.23 E-value=0.1 Score=55.32 Aligned_cols=108 Identities=18% Similarity=0.199 Sum_probs=74.1
Q ss_pred chhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCCh
Q 012553 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 388 (461)
Q Consensus 309 GTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~ 388 (461)
|+......|+ .+.+|..+.+.+++|+|.|..|.++|+.+... |. +++.+|+... +. +..
T Consensus 258 ~~~~~l~~gw---~~~~g~~L~GktVgIIG~G~IG~~vA~~l~~~-----G~-------~V~v~d~~~~----~~--~~a 316 (494)
T 3d64_A 258 GCRESLVDGI---KRATDVMIAGKIAVVAGYGDVGKGCAQSLRGL-----GA-------TVWVTEIDPI----CA--LQA 316 (494)
T ss_dssp HHHTTHHHHH---HHHHCCCCTTCEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEECSCHH----HH--HHH
T ss_pred hhhhhhhhhh---hhccccccCCCEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEEeCChH----hH--HHH
Confidence 3333344552 35688999999999999999999999988532 53 6888887521 00 000
Q ss_pred hhhhhccccCCCCCHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcCC
Q 012553 389 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLWL 447 (461)
Q Consensus 389 ~k~~fA~~~~~~~~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Lsn 447 (461)
+...-...+|.|+++. .|++|......++++++.++.|.+ .-||.=.+-
T Consensus 317 -----~~~G~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK~---gAilINvgr 365 (494)
T 3d64_A 317 -----AMEGYRVVTMEYAADK--ADIFVTATGNYHVINHDHMKAMRH---NAIVCNIGH 365 (494)
T ss_dssp -----HTTTCEECCHHHHTTT--CSEEEECSSSSCSBCHHHHHHCCT---TEEEEECSS
T ss_pred -----HHcCCEeCCHHHHHhc--CCEEEECCCcccccCHHHHhhCCC---CcEEEEcCC
Confidence 0011112479999987 999999877778999999999975 455554443
No 53
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=94.05 E-value=0.34 Score=49.58 Aligned_cols=65 Identities=23% Similarity=0.266 Sum_probs=50.9
Q ss_pred CCceeccCCC---chhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 299 THLVFNDDIQ---GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 299 ~~~~FnDDiQ---GTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.|++.|.--- .+|=-+++.+++..|-.|..|.+.+|.|+|.|..|..+|+.+... |+ +++.+|+.
T Consensus 81 gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d~~ 148 (380)
T 2o4c_A 81 GIAWSSAPGCNARGVVDYVLGCLLAMAEVRGADLAERTYGVVGAGQVGGRLVEVLRGL-----GW-------KVLVCDPP 148 (380)
T ss_dssp TCEEECCTTTTHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECHH
T ss_pred CCEEEeCCCcChHHHHHHHHHHHHHHHhhhhcccCCCEEEEEeCCHHHHHHHHHHHHC-----CC-------EEEEEcCC
Confidence 4556664322 344458999999999999999999999999999999999988642 64 68888863
No 54
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=94.03 E-value=0.073 Score=52.46 Aligned_cols=105 Identities=18% Similarity=0.196 Sum_probs=68.4
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCC---CCCHHHhhc
Q 012553 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP---VNNLLDAVK 408 (461)
Q Consensus 333 riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~---~~~L~eaV~ 408 (461)
||+|+|| |..|..++..|+. .|+ ...++++|.+- ..+....|.+...+ . +-.. ..++.++++
T Consensus 2 KI~IiGa~G~VG~~la~~L~~-----~~~-----~~ev~L~Di~~--~~~~a~dL~~~~~~-~-~l~~~~~t~d~~~a~~ 67 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKN-----SPL-----VSRLTLYDIAH--TPGVAADLSHIETR-A-TVKGYLGPEQLPDCLK 67 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHT-----CTT-----CSEEEEEESSS--HHHHHHHHTTSSSS-C-EEEEEESGGGHHHHHT
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CcEEEEEeCCc--cHHHHHHHhccCcC-c-eEEEecCCCCHHHHhC
Confidence 8999998 9999998877653 354 35799999864 11100012111100 0 0001 135888999
Q ss_pred ccCCcEEEeccCCC---C-----------CCCHHHHHHHhcCCCCcEEEEcCCCCchhh
Q 012553 409 VIKPTILIGSSGVG---R-----------TFTKEVIEAMASFNEVVFQALLWLIRKFNF 453 (461)
Q Consensus 409 ~vkptvLIG~S~~~---g-----------~Ft~evv~~Ma~~~erPIIF~Lsnp~~~~~ 453 (461)
+ +|++|=+.+.+ | ...+++++.|.+++...+|+-.|||-+.+-
T Consensus 68 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~ 124 (314)
T 1mld_A 68 G--CDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVNSTI 124 (314)
T ss_dssp T--CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCHHHHH
T ss_pred C--CCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCCcchhH
Confidence 8 89988554443 2 246778888888888888888999988763
No 55
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=94.00 E-value=0.39 Score=49.90 Aligned_cols=116 Identities=21% Similarity=0.217 Sum_probs=83.7
Q ss_pred ChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCcccHHH---HHHHHc---CC--CceeccC----------CCchhHHHH
Q 012553 254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFE---LLAKYG---TT--HLVFNDD----------IQGTASVVL 315 (461)
Q Consensus 254 ~g~~Y~~~idefv~av~~~fGp~~lIq~EDf~~~~af~---iL~ryr---~~--~~~FnDD----------iQGTaaV~L 315 (461)
+.+|-..|...|++++.+.-||..-|-=+|++.. ..+ +.+.|+ .. ..++--+ -.-||-=+.
T Consensus 116 s~~e~~r~~r~f~~~l~~~iG~~~dvpA~D~Gt~-~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~ 194 (421)
T 1v9l_A 116 SQRELEELSRGYARAIAPLIGDVVDIPAPDVGTN-AQIMAWMVDEYSKIKGYNVPGVFTSKPPELWGNPVREYATGFGVA 194 (421)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCTTCC-HHHHHHHHHHHHHHHTSCCGGGSCSCCSSSSCCGGGGGHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCCC-HHHHHHHHHHHHHHhCCCCCCeEeccchhhCCCCCcccchHHHHH
Confidence 4456677889999999998899988999999873 222 335552 11 1222222 122555556
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEE-EEcCCCccccCC
Q 012553 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSR 382 (461)
Q Consensus 316 Agll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~-lvDs~GLi~~~R 382 (461)
-++-.+++..|.+|++.+|+|.|.|..|...|++|.+ .|. +++ +.|++|-|++..
T Consensus 195 ~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~aa~~L~e-----~Ga-------kVVavsD~~G~i~dp~ 250 (421)
T 1v9l_A 195 VATREMAKKLWGGIEGKTVAIQGMGNVGRWTAYWLEK-----MGA-------KVIAVSDINGVAYRKE 250 (421)
T ss_dssp HHHHHHHHHHHSCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEECSSCEEECTT
T ss_pred HHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEECCCcEEECCC
Confidence 6677788889999999999999999999999988754 252 555 999999998764
No 56
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=93.93 E-value=0.099 Score=51.31 Aligned_cols=104 Identities=13% Similarity=0.212 Sum_probs=65.4
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhh------hccccC-CCCCHHH
Q 012553 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP------WAHEHE-PVNNLLD 405 (461)
Q Consensus 333 riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~------fA~~~~-~~~~L~e 405 (461)
||.|+|||+.|.++|..++.. |. ...++++|.+- ++ +...... +..... ...+ .+
T Consensus 2 kI~VIGaG~~G~~la~~l~~~-----g~-----~~~V~l~D~~~----~~---~~~~~~~l~~~~~~~~~~~i~~~d-~~ 63 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK-----GF-----AREMVLIDVDK----KR---AEGDALDLIHGTPFTRRANIYAGD-YA 63 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSH----HH---HHHHHHHHHHHGGGSCCCEEEECC-GG
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCCh----HH---HHHHHHHHHhhhhhcCCcEEEeCC-HH
Confidence 799999999999999887653 54 24799999751 11 1111111 110000 0124 35
Q ss_pred hhcccCCcEEEeccCCCCC--------------CCHHHHHHHhcCCCCcEEEEcCCCCchhhhhhh
Q 012553 406 AVKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEVVFQALLWLIRKFNFCSLF 457 (461)
Q Consensus 406 aV~~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIF~Lsnp~~~~~~~~~ 457 (461)
+++. +|++|=+.+.+.. .-+++++.|.+++..-+|+-.+||...+ |.+.
T Consensus 64 ~~~~--aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~~~-~~~~ 126 (319)
T 1a5z_A 64 DLKG--SDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVDVL-TYFF 126 (319)
T ss_dssp GGTT--CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHH-HHHH
T ss_pred HhCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcHHHH-HHHH
Confidence 6765 8988855444321 1278888998888777888899999886 4443
No 57
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=93.63 E-value=0.1 Score=49.28 Aligned_cols=81 Identities=25% Similarity=0.320 Sum_probs=54.5
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcc
Q 012553 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (461)
Q Consensus 316 Agll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~ 395 (461)
.|++.+++-.|.++++ +++|+|+|.+|.++|..+... |. +++++|+.- ++ .....+.|..
T Consensus 102 ~g~~~~l~~~~~~l~~-~v~iiG~G~~g~~~a~~l~~~-----g~-------~v~v~~r~~----~~---~~~l~~~~~~ 161 (263)
T 2d5c_A 102 PGFLEALKAGGIPLKG-PALVLGAGGAGRAVAFALREA-----GL-------EVWVWNRTP----QR---ALALAEEFGL 161 (263)
T ss_dssp HHHHHHHHHTTCCCCS-CEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSH----HH---HHHHHHHHTC
T ss_pred HHHHHHHHHhCCCCCC-eEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEECCH----HH---HHHHHHHhcc
Confidence 5888889888889999 999999999999999887542 42 688888741 11 1111112211
Q ss_pred ccCCCCCHHHhhcccCCcEEEeccCCC
Q 012553 396 EHEPVNNLLDAVKVIKPTILIGSSGVG 422 (461)
Q Consensus 396 ~~~~~~~L~eaV~~vkptvLIG~S~~~ 422 (461)
. ..++.++ +. +|++|-+...+
T Consensus 162 ~---~~~~~~~-~~--~Divi~~tp~~ 182 (263)
T 2d5c_A 162 R---AVPLEKA-RE--ARLLVNATRVG 182 (263)
T ss_dssp E---ECCGGGG-GG--CSEEEECSSTT
T ss_pred c---hhhHhhc-cC--CCEEEEccCCC
Confidence 1 3467776 54 89888766544
No 58
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=93.60 E-value=0.042 Score=52.83 Aligned_cols=106 Identities=20% Similarity=0.285 Sum_probs=66.2
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcc
Q 012553 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (461)
Q Consensus 316 Agll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~ 395 (461)
.|++.+++-. .+++ +++|+|||.+|.+++..|... |. ++|+++|+. .+|.+.|.. .|..
T Consensus 96 ~G~~~~l~~~--~~~~-~vliiGaGg~a~ai~~~L~~~-----G~------~~I~v~nR~----~~ka~~la~---~~~~ 154 (253)
T 3u62_A 96 VGVVKSLEGV--EVKE-PVVVVGAGGAARAVIYALLQM-----GV------KDIWVVNRT----IERAKALDF---PVKI 154 (253)
T ss_dssp HHHHHHTTTC--CCCS-SEEEECCSHHHHHHHHHHHHT-----TC------CCEEEEESC----HHHHHTCCS---SCEE
T ss_pred HHHHHHHHhc--CCCC-eEEEECcHHHHHHHHHHHHHc-----CC------CEEEEEeCC----HHHHHHHHH---Hccc
Confidence 3677777654 5678 999999999999998887652 63 579999884 222222221 1111
Q ss_pred ccCCCCCHHHhhcccCCcEEEeccCCC-----CCCCHHHHHHHhcCCCCcEEEEcC-CCCchh
Q 012553 396 EHEPVNNLLDAVKVIKPTILIGSSGVG-----RTFTKEVIEAMASFNEVVFQALLW-LIRKFN 452 (461)
Q Consensus 396 ~~~~~~~L~eaV~~vkptvLIG~S~~~-----g~Ft~evv~~Ma~~~erPIIF~Ls-np~~~~ 452 (461)
....++.++++. +|++|-++..+ ..+.++.++ +..+|+-++ |++.|.
T Consensus 155 --~~~~~~~~~~~~--aDiVInatp~gm~p~~~~i~~~~l~------~~~~V~Divy~~T~ll 207 (253)
T 3u62_A 155 --FSLDQLDEVVKK--AKSLFNTTSVGMKGEELPVSDDSLK------NLSLVYDVIYFDTPLV 207 (253)
T ss_dssp --EEGGGHHHHHHT--CSEEEECSSTTTTSCCCSCCHHHHT------TCSEEEECSSSCCHHH
T ss_pred --CCHHHHHhhhcC--CCEEEECCCCCCCCCCCCCCHHHhC------cCCEEEEeeCCCcHHH
Confidence 123467888886 99999765432 235555442 367777654 355554
No 59
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.55 E-value=0.1 Score=45.15 Aligned_cols=105 Identities=13% Similarity=0.127 Sum_probs=54.8
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCC-hhhhhhcc-ccCCCCCHH
Q 012553 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAH-EHEPVNNLL 404 (461)
Q Consensus 327 ~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~-~~k~~fA~-~~~~~~~L~ 404 (461)
+.....+|+|+|+|..|..+|+.+... | .+++++|++- .+.+.+. .....+.. +......|.
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~-----g-------~~V~vid~~~----~~~~~~~~~~g~~~~~~d~~~~~~l~ 78 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSS-----G-------HSVVVVDKNE----YAFHRLNSEFSGFTVVGDAAEFETLK 78 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESCG----GGGGGSCTTCCSEEEESCTTSHHHHH
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECCH----HHHHHHHhcCCCcEEEecCCCHHHHH
Confidence 345668999999999999999988642 4 3788898742 1111121 11111111 111111244
Q ss_pred Hh-hcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCc-EEEEcCCCCc
Q 012553 405 DA-VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVV-FQALLWLIRK 450 (461)
Q Consensus 405 ea-V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erP-IIF~Lsnp~~ 450 (461)
++ ++. +|++|-+.+.. .....+++.+......+ ||.-..||..
T Consensus 79 ~~~~~~--ad~Vi~~~~~~-~~~~~~~~~~~~~~~~~~iv~~~~~~~~ 123 (155)
T 2g1u_A 79 ECGMEK--ADMVFAFTNDD-STNFFISMNARYMFNVENVIARVYDPEK 123 (155)
T ss_dssp TTTGGG--CSEEEECSSCH-HHHHHHHHHHHHTSCCSEEEEECSSGGG
T ss_pred HcCccc--CCEEEEEeCCc-HHHHHHHHHHHHHCCCCeEEEEECCHHH
Confidence 33 444 89999777643 33344444444424444 4444445543
No 60
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=93.49 E-value=0.077 Score=53.06 Aligned_cols=97 Identities=21% Similarity=0.274 Sum_probs=60.5
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccc----cCCCCCH
Q 012553 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE----HEPVNNL 403 (461)
Q Consensus 328 ~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~----~~~~~~L 403 (461)
.+...+++|+|+|..|..+|+.+.. .|. +++++|++- .+ +...++.+... .....++
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~-----~Ga-------~V~~~d~~~----~~---~~~~~~~~g~~~~~~~~~~~~l 223 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALG-----MGA-------QVTILDVNH----KR---LQYLDDVFGGRVITLTATEANI 223 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCH----HH---HHHHHHHTTTSEEEEECCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEECCH----HH---HHHHHHhcCceEEEecCCHHHH
Confidence 3778999999999999999988764 252 688888741 11 11111111110 1112357
Q ss_pred HHhhcccCCcEEEeccCCCC-----CCCHHHHHHHhcCCCCcEEEEcCCC
Q 012553 404 LDAVKVIKPTILIGSSGVGR-----TFTKEVIEAMASFNEVVFQALLWLI 448 (461)
Q Consensus 404 ~eaV~~vkptvLIG~S~~~g-----~Ft~evv~~Ma~~~erPIIF~Lsnp 448 (461)
.++++. .|++|.+.+.++ .++++.++.|.+ .-+|.-++.+
T Consensus 224 ~~~~~~--~DvVi~~~g~~~~~~~~li~~~~l~~mk~---gg~iV~v~~~ 268 (369)
T 2eez_A 224 KKSVQH--ADLLIGAVLVPGAKAPKLVTRDMLSLMKE---GAVIVDVAVD 268 (369)
T ss_dssp HHHHHH--CSEEEECCC-------CCSCHHHHTTSCT---TCEEEECC--
T ss_pred HHHHhC--CCEEEECCCCCccccchhHHHHHHHhhcC---CCEEEEEecC
Confidence 788876 899998876543 479999999964 3455555543
No 61
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=93.43 E-value=0.63 Score=49.17 Aligned_cols=98 Identities=17% Similarity=0.197 Sum_probs=68.7
Q ss_pred HHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccc-cCCCC
Q 012553 323 KLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVN 401 (461)
Q Consensus 323 k~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~-~~~~~ 401 (461)
+..+..+.+.+|+|+|+|..|.++|+.+... |. +++.+|+.- .+...|.. .-...
T Consensus 266 r~~~~~l~GktV~IiG~G~IG~~~A~~lka~-----Ga-------~Viv~d~~~------------~~~~~A~~~Ga~~~ 321 (494)
T 3ce6_A 266 RGTDALIGGKKVLICGYGDVGKGCAEAMKGQ-----GA-------RVSVTEIDP------------INALQAMMEGFDVV 321 (494)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCH------------HHHHHHHHTTCEEC
T ss_pred hccCCCCCcCEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEEeCCH------------HHHHHHHHcCCEEe
Confidence 4456688999999999999999999887542 52 688888631 11111211 11124
Q ss_pred CHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcCCCC
Q 012553 402 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLWLIR 449 (461)
Q Consensus 402 ~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Lsnp~ 449 (461)
++.|+++. +|++|-+++..++++++.++.|.+ .-+|.-.+...
T Consensus 322 ~l~e~l~~--aDvVi~atgt~~~i~~~~l~~mk~---ggilvnvG~~~ 364 (494)
T 3ce6_A 322 TVEEAIGD--ADIVVTATGNKDIIMLEHIKAMKD---HAILGNIGHFD 364 (494)
T ss_dssp CHHHHGGG--CSEEEECSSSSCSBCHHHHHHSCT---TCEEEECSSSG
T ss_pred cHHHHHhC--CCEEEECCCCHHHHHHHHHHhcCC---CcEEEEeCCCC
Confidence 68888876 899999888788899899999865 55666555544
No 62
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=93.43 E-value=0.13 Score=50.78 Aligned_cols=103 Identities=13% Similarity=0.153 Sum_probs=66.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccc-cCCCCCHHHhhccc
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVI 410 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~-~~~~~~L~eaV~~v 410 (461)
.||.|+|||..|.++|..++.. |+ ...++|+|.+-= ..+....+.+ +... .....++ +++++
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-----g~-----~~ev~L~Di~~~-~~g~a~dl~~----~~~~~i~~t~d~-~~l~~- 77 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-----GI-----ADRLVLLDLSEG-TKGATMDLEI----FNLPNVEISKDL-SASAH- 77 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECCC------CHHHHHH----HTCTTEEEESCG-GGGTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhc-----CC-----CCEEEEEcCCcc-hHHHHHHHhh----hcCCCeEEeCCH-HHHCC-
Confidence 6899999999999999988643 54 368999998531 1111001111 2111 0112466 77887
Q ss_pred CCcEEEeccCCC--C-----------CCCHHHHHHHhcCCCCcEEEEcCCCCchh
Q 012553 411 KPTILIGSSGVG--R-----------TFTKEVIEAMASFNEVVFQALLWLIRKFN 452 (461)
Q Consensus 411 kptvLIG~S~~~--g-----------~Ft~evv~~Ma~~~erPIIF~Lsnp~~~~ 452 (461)
+|++|=..+.+ | -+-+++++.|.+++..-+|+-.|||...+
T Consensus 78 -aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP~~~~ 131 (303)
T 2i6t_A 78 -SKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVEIM 131 (303)
T ss_dssp -CSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSSHHHH
T ss_pred -CCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCChHHHH
Confidence 99998655443 1 02467888899999999998899999854
No 63
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=93.43 E-value=0.9 Score=44.67 Aligned_cols=66 Identities=18% Similarity=0.141 Sum_probs=48.6
Q ss_pred CCCceeccCCCc---hhHHHHHHHHHHHHH----------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHHhc
Q 012553 298 TTHLVFNDDIQG---TASVVLAGVVAALKL----------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQT 358 (461)
Q Consensus 298 ~~~~~FnDDiQG---TaaV~LAgll~Alk~----------------~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~ 358 (461)
..++|.|----. +|=-+++.+|+..|- .+..+.+.+|.|+|.|..|..+|+.+...
T Consensus 90 ~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~----- 164 (313)
T 2ekl_A 90 RNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKKIEGLELAGKTIGIVGFGRIGTKVGIIANAM----- 164 (313)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCCCTTCEEEEESCSHHHHHHHHHHHHT-----
T ss_pred CCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCEEEEEeeCHHHHHHHHHHHHC-----
Confidence 456666643322 344478888888764 35789999999999999999999988642
Q ss_pred CCChhhccceEEEEcCC
Q 012553 359 KAPVEETRKKICLVDSK 375 (461)
Q Consensus 359 Gls~eeA~~~i~lvDs~ 375 (461)
|. +++.+|+.
T Consensus 165 G~-------~V~~~d~~ 174 (313)
T 2ekl_A 165 GM-------KVLAYDIL 174 (313)
T ss_dssp TC-------EEEEECSS
T ss_pred CC-------EEEEECCC
Confidence 54 68888864
No 64
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=93.38 E-value=0.11 Score=50.91 Aligned_cols=104 Identities=18% Similarity=0.207 Sum_probs=66.1
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcc
Q 012553 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (461)
Q Consensus 316 Agll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~ 395 (461)
.|++.+|+-.|.++++.+++|+|||.||.+++..|... |. ++|+++++. .+|. +.+|.
T Consensus 107 ~G~~~~L~~~~~~~~~k~vlvlGaGGaaraia~~L~~~-----G~------~~v~v~nRt----~~ka-------~~La~ 164 (282)
T 3fbt_A 107 IGFGKMLSKFRVEIKNNICVVLGSGGAARAVLQYLKDN-----FA------KDIYVVTRN----PEKT-------SEIYG 164 (282)
T ss_dssp HHHHHHHHHTTCCCTTSEEEEECSSTTHHHHHHHHHHT-----TC------SEEEEEESC----HHHH-------HHHCT
T ss_pred HHHHHHHHHcCCCccCCEEEEECCcHHHHHHHHHHHHc-----CC------CEEEEEeCC----HHHH-------HHHHH
Confidence 78899999889999999999999999999998887652 53 589988873 2221 11221
Q ss_pred ccCCCCCHHHhhcccCCcEEEeccCCC---C----CCCHHHHHHHhcCCCCcEEEEcC-CCC
Q 012553 396 EHEPVNNLLDAVKVIKPTILIGSSGVG---R----TFTKEVIEAMASFNEVVFQALLW-LIR 449 (461)
Q Consensus 396 ~~~~~~~L~eaV~~vkptvLIG~S~~~---g----~Ft~evv~~Ma~~~erPIIF~Ls-np~ 449 (461)
.-. ..++.+.-+ +++|++|-++..| . .+..+.++ +..+|+=+. ||.
T Consensus 165 ~~~-~~~~~~l~~-l~~DivInaTp~Gm~~~~~~~pi~~~~l~------~~~~v~DlvY~P~ 218 (282)
T 3fbt_A 165 EFK-VISYDELSN-LKGDVIINCTPKGMYPKEGESPVDKEVVA------KFSSAVDLIYNPV 218 (282)
T ss_dssp TSE-EEEHHHHTT-CCCSEEEECSSTTSTTSTTCCSSCHHHHT------TCSEEEESCCSSS
T ss_pred hcC-cccHHHHHh-ccCCEEEECCccCccCCCccCCCCHHHcC------CCCEEEEEeeCCC
Confidence 100 011222211 2699999776543 1 24555443 356788665 874
No 65
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=93.38 E-value=0.12 Score=54.20 Aligned_cols=26 Identities=12% Similarity=-0.139 Sum_probs=23.4
Q ss_pred HHHHHHHhcCCCCcEEEEcCCCCchh
Q 012553 427 KEVIEAMASFNEVVFQALLWLIRKFN 452 (461)
Q Consensus 427 ~evv~~Ma~~~erPIIF~Lsnp~~~~ 452 (461)
.++++.|.+++..-+++-.+||.-.+
T Consensus 140 ~~i~~~i~~~~P~A~~in~tNP~~i~ 165 (477)
T 3u95_A 140 LEIAEKMKKMAPKAYLMQTANPVFEI 165 (477)
T ss_dssp HHHHHHHHHHCTTCEEEECSSCHHHH
T ss_pred HHHHHHHHhhCCCeEEEEecChHHHH
Confidence 68999999999999999999997654
No 66
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=93.33 E-value=0.49 Score=48.50 Aligned_cols=65 Identities=12% Similarity=0.115 Sum_probs=51.6
Q ss_pred CCCceeccCC---CchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcC
Q 012553 298 TTHLVFNDDI---QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (461)
Q Consensus 298 ~~~~~FnDDi---QGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs 374 (461)
..|.+.|--- +.+|=-+++.+++..|-.|..|.+.++.|+|.|..|..+|+.+... |+ +++.+|+
T Consensus 83 ~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~g~~l~gktvGIIGlG~IG~~vA~~l~a~-----G~-------~V~~~d~ 150 (381)
T 3oet_A 83 AGIGFSAAPGCNAIAVVEYVFSALLMLAERDGFSLRDRTIGIVGVGNVGSRLQTRLEAL-----GI-------RTLLCDP 150 (381)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECH
T ss_pred CCEEEEECCCcCcchhHHHHHHHHHHHHHhcCCccCCCEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEECC
Confidence 3556666432 2445567999999999999999999999999999999999998643 65 6888886
No 67
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=93.32 E-value=0.065 Score=52.41 Aligned_cols=107 Identities=13% Similarity=0.143 Sum_probs=66.8
Q ss_pred ceEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcC--CCccccC-CcCCCChhhhhhccccCCCCCHHHhh
Q 012553 332 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS--KGLIVSS-RKDSLQHFKKPWAHEHEPVNNLLDAV 407 (461)
Q Consensus 332 ~riv~~G-AGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs--~GLi~~~-R~~~L~~~k~~fA~~~~~~~~L~eaV 407 (461)
.||+|.| ||..|..++..|+. .|+ ...++++|. +-=-.++ ..| |.+... +..+..-..+-.+++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~~~d-l~~~~~-~~~~~~v~~~~~~a~ 68 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIAL-----RDI-----ADEVVFVDIPDKEDDTVGQAAD-TNHGIA-YDSNTRVRQGGYEDT 68 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TTC-----CSEEEEECCGGGHHHHHHHHHH-HHHHHT-TTCCCEEEECCGGGG
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEcCCCChhhHHHHHHH-HHHHHh-hCCCcEEEeCCHHHh
Confidence 3899999 99999999887754 243 246999997 2100000 001 211111 111100001126778
Q ss_pred cccCCcEEEeccCCC---CC-----------CCHHHHHHHhcCCCCcEEEEcCCCCchh
Q 012553 408 KVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEVVFQALLWLIRKFN 452 (461)
Q Consensus 408 ~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIF~Lsnp~~~~ 452 (461)
++ +|++|=+.+.+ |. .+++++++|.+++.+.+|+--|||-..+
T Consensus 69 ~~--aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv~~~ 125 (303)
T 1o6z_A 69 AG--SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPVDLL 125 (303)
T ss_dssp TT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSHHHH
T ss_pred CC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChHHHH
Confidence 87 89998666544 32 5678899999999999999999998775
No 68
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=93.26 E-value=0.26 Score=47.58 Aligned_cols=100 Identities=18% Similarity=0.138 Sum_probs=67.7
Q ss_pred HHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCC
Q 012553 322 LKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVN 401 (461)
Q Consensus 322 lk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~ 401 (461)
++..+..+.+.+++|+|+|..|..+|+.+... |. +++.+|+.- .+ +...+..-++. ....
T Consensus 148 ~~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~-----G~-------~V~~~d~~~----~~---~~~~~~~g~~~-~~~~ 207 (300)
T 2rir_A 148 IQHTDYTIHGSQVAVLGLGRTGMTIARTFAAL-----GA-------NVKVGARSS----AH---LARITEMGLVP-FHTD 207 (300)
T ss_dssp HHTCSSCSTTSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSH----HH---HHHHHHTTCEE-EEGG
T ss_pred HHhcCCCCCCCEEEEEcccHHHHHHHHHHHHC-----CC-------EEEEEECCH----HH---HHHHHHCCCeE-Echh
Confidence 44567899999999999999999999987642 53 688888742 11 11111100110 0124
Q ss_pred CHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcCC
Q 012553 402 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLWL 447 (461)
Q Consensus 402 ~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Lsn 447 (461)
+|.|+++. .|++|-.... +.++++.++.|.+ ..+|+=++-
T Consensus 208 ~l~~~l~~--aDvVi~~~p~-~~i~~~~~~~mk~---g~~lin~a~ 247 (300)
T 2rir_A 208 ELKEHVKD--IDICINTIPS-MILNQTVLSSMTP---KTLILDLAS 247 (300)
T ss_dssp GHHHHSTT--CSEEEECCSS-CCBCHHHHTTSCT---TCEEEECSS
T ss_pred hHHHHhhC--CCEEEECCCh-hhhCHHHHHhCCC---CCEEEEEeC
Confidence 68888876 9999977664 6999998887754 567777763
No 69
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=93.25 E-value=0.071 Score=52.66 Aligned_cols=114 Identities=11% Similarity=0.019 Sum_probs=69.4
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC--Cc---cccCCcCCCChhhhhhccccCCCCCHH
Q 012553 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK--GL---IVSSRKDSLQHFKKPWAHEHEPVNNLL 404 (461)
Q Consensus 331 d~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~--GL---i~~~R~~~L~~~k~~fA~~~~~~~~L~ 404 (461)
..||+|.|| |..|..++..|+. .|+-...-...++++|.. .. +.....+ |.+.-.++..+.....++.
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~-----~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~d-l~~~~~~~~~~i~~~~~~~ 78 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIAN-----GDMLGKDQPVILQLLEIPNEKAQKALQGVMME-IDDCAFPLLAGMTAHADPM 78 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCSCHHHHHHHHHHHHH-HHTTTCTTEEEEEEESSHH
T ss_pred CCEEEEECCCChHHHHHHHHHHh-----CCCcCCCCCCEEEEEcCCCccccccchhhHHH-HhhhcccccCcEEEecCcH
Confidence 358999998 9999998887754 243111113479999975 10 0000000 1110012222211225789
Q ss_pred HhhcccCCcEEEeccCCCC--------------CCCHHHHHHHhcCC-CCcEEEEcCCCCchh
Q 012553 405 DAVKVIKPTILIGSSGVGR--------------TFTKEVIEAMASFN-EVVFQALLWLIRKFN 452 (461)
Q Consensus 405 eaV~~vkptvLIG~S~~~g--------------~Ft~evv~~Ma~~~-erPIIF~Lsnp~~~~ 452 (461)
+++++ +|++|=+.+.+. ..++++++.+.+++ ...+|+-.|||-..+
T Consensus 79 ~al~~--aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~ 139 (329)
T 1b8p_A 79 TAFKD--ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTN 139 (329)
T ss_dssp HHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHH
T ss_pred HHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHH
Confidence 99998 899885555442 13678889999986 787888889998654
No 70
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=93.24 E-value=0.12 Score=50.37 Aligned_cols=137 Identities=16% Similarity=0.151 Sum_probs=79.2
Q ss_pred HHHHHHHHH-HhcCCCeeeeeecCCcccHHHHHHHHcC--------CCceeccC--CCchhHHHHHHHHHHHHHhCCCcc
Q 012553 262 LDEFMSAVK-QNYGEKVLIQFEDFANHNAFELLAKYGT--------THLVFNDD--IQGTASVVLAGVVAALKLIGGTLA 330 (461)
Q Consensus 262 idefv~av~-~~fGp~~lIq~EDf~~~~af~iL~ryr~--------~~~~FnDD--iQGTaaV~LAgll~Alk~~g~~l~ 330 (461)
+.++++.++ ..|.+ ++.--=-...+++++++... +..++++| ..|.-.= ..|++.+|+-.|.+++
T Consensus 50 l~~~~~~~~~~~~~G---~nVTiP~K~~v~~~ld~l~~~A~~iGAVNTv~~~~~g~l~G~NTD-~~G~~~~L~~~~~~l~ 125 (281)
T 3o8q_A 50 FTEAAKHFFAQGGRG---CNVTVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTD-GEGLVQDLLAQQVLLK 125 (281)
T ss_dssp HHHHHHHHHHTTCCE---EEECTTSHHHHHHHCSEECHHHHHHTCCSEEEECTTSCEEEECCH-HHHHHHHHHHTTCCCT
T ss_pred HHHHHHHHHhCCCCE---EEECCccHHHHHHHHhhcCHHHHhhCeeeEEEEcCCCcEEEEecH-HHHHHHHHHHhCCCcc
Confidence 567777765 35544 54433333455666654421 22345555 3442221 4678888888889999
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcccc-CCCCCHHHhhcc
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH-EPVNNLLDAVKV 409 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~-~~~~~L~eaV~~ 409 (461)
+.+++|+|||.+|.+++..+.. .|. ++|+++++. .++ .....+.+.... -...++.|+.+
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~----~~~---a~~la~~~~~~~~~~~~~~~~l~~- 186 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLD-----QQP------ASITVTNRT----FAK---AEQLAELVAAYGEVKAQAFEQLKQ- 186 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHT-----TCC------SEEEEEESS----HHH---HHHHHHHHGGGSCEEEEEGGGCCS-
T ss_pred CCEEEEECchHHHHHHHHHHHh-----cCC------CeEEEEECC----HHH---HHHHHHHhhccCCeeEeeHHHhcC-
Confidence 9999999999888888877754 253 589988874 121 111122222110 00123444333
Q ss_pred cCCcEEEeccCCC
Q 012553 410 IKPTILIGSSGVG 422 (461)
Q Consensus 410 vkptvLIG~S~~~ 422 (461)
++|++|-++..+
T Consensus 187 -~aDiIInaTp~g 198 (281)
T 3o8q_A 187 -SYDVIINSTSAS 198 (281)
T ss_dssp -CEEEEEECSCCC
T ss_pred -CCCEEEEcCcCC
Confidence 589999777654
No 71
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=93.21 E-value=0.16 Score=47.47 Aligned_cols=109 Identities=13% Similarity=0.097 Sum_probs=61.7
Q ss_pred hCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCcc--ccCCcCCCC-hhhhhhcccc--CC
Q 012553 325 IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI--VSSRKDSLQ-HFKKPWAHEH--EP 399 (461)
Q Consensus 325 ~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi--~~~R~~~L~-~~k~~fA~~~--~~ 399 (461)
...++...||.|+|+|..|.++|..+... | .+++++|++-=- .......+. .....++... ..
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~-----G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADL-----G-------HEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVH 80 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCE
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCcee
Confidence 45578889999999999999999988753 5 268888875211 000000010 0012232221 12
Q ss_pred CCCHHHhhcccCCcEEEeccCCCCCCCHHHHHHH-hcCCCCcEEEEcCCCC
Q 012553 400 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAM-ASFNEVVFQALLWLIR 449 (461)
Q Consensus 400 ~~~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~M-a~~~erPIIF~Lsnp~ 449 (461)
..++.|+++. +|++| ++..+. -..++++.+ +..-+..+|.-+|||-
T Consensus 81 ~~~~~e~~~~--aDvVi-lavp~~-~~~~~~~~i~~~~l~g~ivi~~s~~~ 127 (245)
T 3dtt_A 81 LAAFADVAAG--AELVV-NATEGA-SSIAALTAAGAENLAGKILVDIANPL 127 (245)
T ss_dssp EEEHHHHHHH--CSEEE-ECSCGG-GHHHHHHHHCHHHHTTSEEEECCCCE
T ss_pred ccCHHHHHhc--CCEEE-EccCcH-HHHHHHHHhhhhhcCCCEEEECCCCC
Confidence 3578999987 89887 444332 334666666 4333567999999974
No 72
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=93.20 E-value=2.7 Score=44.04 Aligned_cols=176 Identities=16% Similarity=0.137 Sum_probs=113.9
Q ss_pred hhhhHHHHHHHHHHHHHhcCCCeeeeeecCCcccH--HHHHHHHc---CC--Cceecc----------CCCchhHHHHHH
Q 012553 255 GQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA--FELLAKYG---TT--HLVFND----------DIQGTASVVLAG 317 (461)
Q Consensus 255 g~~Y~~~idefv~av~~~fGp~~lIq~EDf~~~~a--f~iL~ryr---~~--~~~FnD----------DiQGTaaV~LAg 317 (461)
..|-..|...||..+.+..||..-|-=+|++..-. --+.+.|+ .. .-|+-. .-.-||-=+.-+
T Consensus 137 ~~e~~r~~r~f~~~L~~~ig~~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~~tGk~~~~GGs~~r~~aTg~Gv~~~ 216 (449)
T 1bgv_A 137 DREVMRFCQAFMTELYRHIGPDIDVPAGDLGVGAREIGYMYGQYRKIVGGFYNGVLTGKARSFGGSLVRPEATGYGSVYY 216 (449)
T ss_dssp HHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhheeCCCCcCCCCCCCCCHHHHHHHHHHHHHhcCCCcCceEecCCcccCCCCCcccchhHHHHHH
Confidence 35666777778989988899999999999987521 12333443 21 122211 113366666667
Q ss_pred HHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCC-Chh-------
Q 012553 318 VVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL-QHF------- 389 (461)
Q Consensus 318 ll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L-~~~------- 389 (461)
+-.+++..|.+|++.||+|-|.|..|...|++|.+. |. +=+-+.|++|-|++.. .+ ++.
T Consensus 217 ~~~~~~~~G~~l~g~~v~VqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~G~i~dp~--Gi~d~edi~~l~~ 283 (449)
T 1bgv_A 217 VEAVMKHENDTLVGKTVALAGFGNVAWGAAKKLAEL-----GA------KAVTLSGPDGYIYDPE--GITTEEKINYMLE 283 (449)
T ss_dssp HHHHHHHTTCCSTTCEEEECCSSHHHHHHHHHHHHH-----TC------EEEEEEETTEEEECTT--CSCSHHHHHHHHH
T ss_pred HHHHHHHccCCcCCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEeCCceEECCC--cCCCHHHHHHHHH
Confidence 778888899999999999999999999999888654 53 3344789999888753 34 221
Q ss_pred -h-------hhhccc--cCCCCCHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcCC
Q 012553 390 -K-------KPWAHE--HEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLWL 447 (461)
Q Consensus 390 -k-------~~fA~~--~~~~~~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Lsn 447 (461)
+ ..|+.. .+.. +-.+. -.++.|+|+=+.. ++.+|++-.+.+.++ ...||.-=+|
T Consensus 284 ~k~~~~g~v~~y~~~~~a~~i-~~~e~-~~~~~Dil~P~A~-~~~I~~~na~~l~a~-g~kiV~EgAN 347 (449)
T 1bgv_A 284 MRASGRNKVQDYADKFGVQFF-PGEKP-WGQKVDIIMPCAT-QNDVDLEQAKKIVAN-NVKYYIEVAN 347 (449)
T ss_dssp HHHHCCCCTHHHHHHHTCEEE-ETCCG-GGSCCSEEECCSC-TTCBCHHHHHHHHHT-TCCEEECCSS
T ss_pred HHhccCCChhhcccccCCEEe-Cchhh-hcCCcceeecccc-ccccchhhHHHHHhc-CCeEEEeCCC
Confidence 1 111110 0000 00122 2568999997775 569999999998652 3457776666
No 73
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=93.13 E-value=0.13 Score=49.38 Aligned_cols=36 Identities=17% Similarity=0.386 Sum_probs=28.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
..||.|+|+|..|.++|..+... |.+ ..+|+++|++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~-----g~~----~~~V~v~dr~ 38 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIAN-----GYD----PNRICVTNRS 38 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHT-----TCC----GGGEEEECSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHC-----CCC----CCeEEEEeCC
Confidence 46899999999999999988753 642 3478888874
No 74
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=92.60 E-value=0.057 Score=53.15 Aligned_cols=108 Identities=13% Similarity=0.128 Sum_probs=65.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCC-CCCHHHhhccc
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP-VNNLLDAVKVI 410 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~-~~~L~eaV~~v 410 (461)
.||.|+|||..|.++|..+... |+ ...|+++|.+--..+.....+.+. .++...... ..+..+++++
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~-----~~-----~~ev~l~Di~~~~~~~~~~dl~~~-~~~~~~~~~i~~~~~~al~~- 74 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQ-----GI-----ADEIVLIDANESKAIGDAMDFNHG-KVFAPKPVDIWHGDYDDCRD- 74 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHHH-TTSSSSCCEEEECCGGGTTT-
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCcchHHHHHhhHHHH-hhhcCCCeEEEcCcHHHhCC-
Confidence 5999999999999999776542 54 257999998521111000001111 111110000 0234577877
Q ss_pred CCcEEEeccCCCC--------------CCCHHHHHHHhcCCCCcEEEEcCCCCchh
Q 012553 411 KPTILIGSSGVGR--------------TFTKEVIEAMASFNEVVFQALLWLIRKFN 452 (461)
Q Consensus 411 kptvLIG~S~~~g--------------~Ft~evv~~Ma~~~erPIIF~Lsnp~~~~ 452 (461)
+|++|=+.+.+. ...+++++.|.+++..-++|-.|||-+.+
T Consensus 75 -aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tNPv~~~ 129 (316)
T 1ldn_A 75 -ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVDIL 129 (316)
T ss_dssp -CSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSSHHHH
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCCchHHH
Confidence 899985544442 23467888888888887888899998765
No 75
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=92.46 E-value=0.2 Score=48.79 Aligned_cols=48 Identities=33% Similarity=0.381 Sum_probs=40.3
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcC
Q 012553 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (461)
Q Consensus 316 Agll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs 374 (461)
.|++.+++-.|.+++..|++++|||-|+-+|+-.|.+. | .++|+++++
T Consensus 110 ~Gf~~~L~~~g~~~~~~~~lilGaGGaarai~~aL~~~-----g------~~~i~i~nR 157 (269)
T 3tum_A 110 AGFLGAAHKHGFEPAGKRALVIGCGGVGSAIAYALAEA-----G------IASITLCDP 157 (269)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHT-----T------CSEEEEECS
T ss_pred HHHHHHHHHhCCCcccCeEEEEecHHHHHHHHHHHHHh-----C------CCeEEEeCC
Confidence 46778888889999999999999999999998777543 5 368999887
No 76
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=92.41 E-value=1.3 Score=45.78 Aligned_cols=166 Identities=19% Similarity=0.240 Sum_probs=104.0
Q ss_pred ChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCcccHHH---HHHHHc---CCC-c---eeccC----------CCchhHH
Q 012553 254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFE---LLAKYG---TTH-L---VFNDD----------IQGTASV 313 (461)
Q Consensus 254 ~g~~Y~~~idefv~av~~~fGp~~lIq~EDf~~~~af~---iL~ryr---~~~-~---~FnDD----------iQGTaaV 313 (461)
+-+|-..|...|++++.+.-||..-|-=+|++.. ..+ +.+.|. ... + ++--+ -.-||-=
T Consensus 115 s~~e~~~~~r~f~~~l~~~~g~~~dv~a~D~gt~-~~~m~~~~~~y~~~~~~~~~~~~~~tGk~~~~GGs~~~~~aTg~G 193 (419)
T 1gtm_A 115 SDREKERLARGYIRAIYDVISPYEDIPAPDVYTN-PQIMAWMMDEYETISRRKTPAFGIITGKPLSIGGSLGRIEATARG 193 (419)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCC-HHHHHHHHHHHHHHHTTSSCGGGGCSSCCGGGTCCTTTTTHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcEEeCCCCCCC-HHHHHHHHHHHHHhhCCCCCccceEecCcchhCCCCCCCcchhhH
Confidence 3456677889999999998888888888999863 222 334552 221 2 33222 1236666
Q ss_pred HHHHHHHHHHHhCCC-cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEE-cCCCccccCCcCCCChhhh
Q 012553 314 VLAGVVAALKLIGGT-LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLV-DSKGLIVSSRKDSLQHFKK 391 (461)
Q Consensus 314 ~LAgll~Alk~~g~~-l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lv-Ds~GLi~~~R~~~L~~~k~ 391 (461)
+.-++-.+++..|.+ |++.++.|.|.|..|..+|+++... .|+ +++.+ |+.|-+.....-++++-.
T Consensus 194 v~~~~~~~~~~~G~~~l~gktvgI~G~G~VG~~vA~~l~~~----~G~-------kVv~~sD~~g~~~~~~gvdl~~L~- 261 (419)
T 1gtm_A 194 ASYTIREAAKVLGWDTLKGKTIAIQGYGNAGYYLAKIMSED----FGM-------KVVAVSDSKGGIYNPDGLNADEVL- 261 (419)
T ss_dssp HHHHHHHHHHHTTCSCSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEEECSSCEEEEEEEECHHHHH-
T ss_pred HHHHHHHHHHHhCCcccCCCEEEEEcCCHHHHHHHHHHHHh----cCC-------EEEEEeCCCccccCccCCCHHHHH-
Confidence 666778888889999 9999999999999999999988641 253 45544 887754432110111111
Q ss_pred hhccc------cCCCCCH-HHhhcccCCcEEEeccCCCCCCCHHHHHHH
Q 012553 392 PWAHE------HEPVNNL-LDAVKVIKPTILIGSSGVGRTFTKEVIEAM 433 (461)
Q Consensus 392 ~fA~~------~~~~~~L-~eaV~~vkptvLIG~S~~~g~Ft~evv~~M 433 (461)
.++.. -++...+ .+.+...|+|+||=++. ++.++++-++++
T Consensus 262 ~~~d~~~~l~~l~~t~~i~~~~l~~mk~dilIn~Ar-G~~Vde~a~~aL 309 (419)
T 1gtm_A 262 KWKNEHGSVKDFPGATNITNEELLELEVDVLAPAAI-EEVITKKNADNI 309 (419)
T ss_dssp HHHHHHSSSTTCTTSEEECHHHHHHSCCSEEEECSC-SCCBCTTGGGGC
T ss_pred HHHHhcCEeecCccCeeeCHHHHHhCCCCEEEECCC-cccCCHHHHHHh
Confidence 11100 0000101 23456678999998775 669999876655
No 77
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=92.39 E-value=0.1 Score=51.13 Aligned_cols=113 Identities=17% Similarity=0.155 Sum_probs=66.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccC--CCCCHHHhhcc
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHE--PVNNLLDAVKV 409 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~--~~~~L~eaV~~ 409 (461)
.||.|+|||..|.++|-.++. .|+ . + ++++|.+-=-.++....+.+...+...... ...++ +++++
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~-----~g~----~-~-v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~ 70 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAA-----KEL----G-D-IVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTAN 70 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC----S-E-EEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHH-----CCC----C-e-EEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCC
Confidence 489999999999999997754 253 1 3 999997410000000001111100111100 01456 77887
Q ss_pred cCCcEEEeccCCCCC--------------CCHHHHHHHhcCCCCcEEEEcCCCCchhhhhhhhh
Q 012553 410 IKPTILIGSSGVGRT--------------FTKEVIEAMASFNEVVFQALLWLIRKFNFCSLFKR 459 (461)
Q Consensus 410 vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIF~Lsnp~~~~~~~~~~~ 459 (461)
+|++|=+.+.+.. ..+++.+.+.+++..-+|+--|||-..+ |..+++
T Consensus 71 --aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNPv~~~-t~~~~~ 131 (309)
T 1ur5_A 71 --SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLDAM-TYLAAE 131 (309)
T ss_dssp --CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCSSHHHH-HHHHHH
T ss_pred --CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCCchHHH-HHHHHH
Confidence 8999865544421 2247888888888888888889999876 555443
No 78
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=92.34 E-value=1 Score=44.37 Aligned_cols=67 Identities=16% Similarity=0.117 Sum_probs=48.4
Q ss_pred cCCCceeccCCCc---hhHHHHHHHHHHHHHh---------------------CCCcccceEEEeCcchHHHHHHHHHHH
Q 012553 297 GTTHLVFNDDIQG---TASVVLAGVVAALKLI---------------------GGTLAEHRFLFLGAGEAGTGIAELIAL 352 (461)
Q Consensus 297 r~~~~~FnDDiQG---TaaV~LAgll~Alk~~---------------------g~~l~d~riv~~GAGsAgiGiA~ll~~ 352 (461)
+..++|.|----. +|=-+++.+|+..|-. |..+.+.+|.|+|+|..|..+|+.+..
T Consensus 97 ~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~ 176 (330)
T 2gcg_A 97 KRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKP 176 (330)
T ss_dssp HTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEEEEECCSHHHHHHHHHHGG
T ss_pred hCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEEEEECcCHHHHHHHHHHHH
Confidence 3567777764333 3444788888877622 356889999999999999999998753
Q ss_pred HHHHhcCCChhhccceEEEEcCC
Q 012553 353 EISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 353 ~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.|. +++.+|+.
T Consensus 177 -----~G~-------~V~~~d~~ 187 (330)
T 2gcg_A 177 -----FGV-------QRFLYTGR 187 (330)
T ss_dssp -----GTC-------CEEEEESS
T ss_pred -----CCC-------EEEEECCC
Confidence 253 58888864
No 79
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=92.32 E-value=0.13 Score=49.03 Aligned_cols=103 Identities=19% Similarity=0.261 Sum_probs=63.3
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCcccc--CCc-----CCCChhhhhhcc----c
Q 012553 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVS--SRK-----DSLQHFKKPWAH----E 396 (461)
Q Consensus 328 ~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~--~R~-----~~L~~~k~~fA~----~ 396 (461)
+|++.||+|+|+|..|..+|+.|+.+ |+ ++|.++|.+=+=.. .|. +++-..|..-+. .
T Consensus 25 ~l~~~~VlvvG~GglG~~va~~La~~-----Gv------g~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~ 93 (251)
T 1zud_1 25 KLLDSQVLIIGLGGLGTPAALYLAGA-----GV------GTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQ 93 (251)
T ss_dssp HHHTCEEEEECCSTTHHHHHHHHHHT-----TC------SEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHH
T ss_pred HHhcCcEEEEccCHHHHHHHHHHHHc-----CC------CeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHH
Confidence 56788999999999999999998764 65 68999998732111 110 001111211110 0
Q ss_pred -cC---------CC--CCHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEc
Q 012553 397 -HE---------PV--NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALL 445 (461)
Q Consensus 397 -~~---------~~--~~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~L 445 (461)
.+ .. .++.+.++. .|++|.++.. .-+...+...+.....|+|.+-
T Consensus 94 ~np~~~v~~~~~~~~~~~~~~~~~~--~DvVi~~~d~--~~~r~~l~~~~~~~~~p~i~~~ 150 (251)
T 1zud_1 94 LNPDIQLTALQQRLTGEALKDAVAR--ADVVLDCTDN--MATRQEINAACVALNTPLITAS 150 (251)
T ss_dssp HCTTSEEEEECSCCCHHHHHHHHHH--CSEEEECCSS--HHHHHHHHHHHHHTTCCEEEEE
T ss_pred HCCCCEEEEEeccCCHHHHHHHHhc--CCEEEECCCC--HHHHHHHHHHHHHhCCCEEEEe
Confidence 00 01 235566765 8999977652 2356667777766778988763
No 80
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=92.29 E-value=1.6 Score=43.20 Aligned_cols=66 Identities=20% Similarity=0.149 Sum_probs=46.1
Q ss_pred CCCceeccCCCc---hhHHHHHHHHHHHHHh-------------------------CCCcccceEEEeCcchHHHHHHHH
Q 012553 298 TTHLVFNDDIQG---TASVVLAGVVAALKLI-------------------------GGTLAEHRFLFLGAGEAGTGIAEL 349 (461)
Q Consensus 298 ~~~~~FnDDiQG---TaaV~LAgll~Alk~~-------------------------g~~l~d~riv~~GAGsAgiGiA~l 349 (461)
..|+|.|----. +|=-+++.+|+..|-. |..|.+.+|.|+|+|..|..+|+.
T Consensus 89 ~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~ 168 (334)
T 2dbq_A 89 RGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKR 168 (334)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTTTTCCCCCTTCEEEEECCSHHHHHHHHH
T ss_pred CCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccccccccccccccCCCCCEEEEEccCHHHHHHHHH
Confidence 345666643322 3334677777776521 457889999999999999999998
Q ss_pred HHHHHHHhcCCChhhccceEEEEcCC
Q 012553 350 IALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 350 l~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
+... |. +++.+|+.
T Consensus 169 l~~~-----G~-------~V~~~d~~ 182 (334)
T 2dbq_A 169 AKGF-----NM-------RILYYSRT 182 (334)
T ss_dssp HHHT-----TC-------EEEEECSS
T ss_pred HHhC-----CC-------EEEEECCC
Confidence 8642 53 68888874
No 81
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=92.28 E-value=0.096 Score=52.08 Aligned_cols=109 Identities=12% Similarity=0.143 Sum_probs=67.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhccc
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~v 410 (461)
..||.|+|||+.|..+|-+|+.. ++ ...++|+|.+-=-.++-...|.+. .+|..+..-..+-.+++++
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~-~~~~~~~~i~~~~~~a~~~- 76 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLSNA-LPFTSPKKIYSAEYSDAKD- 76 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTT-GGGSCCCEEEECCGGGGGG-
T ss_pred CCEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHhHHHHHHHHHH-HHhcCCeEEEECCHHHhCC-
Confidence 36999999999999998877543 44 368999997410000000001111 1222111001234777888
Q ss_pred CCcEEEeccCCCCC--------------CCHHHHHHHhcCCCCcEEEEcCCCCchh
Q 012553 411 KPTILIGSSGVGRT--------------FTKEVIEAMASFNEVVFQALLWLIRKFN 452 (461)
Q Consensus 411 kptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIF~Lsnp~~~~ 452 (461)
+|++|=+.+.+.. +-+++++.|.+++..-+|+-.+||-..+
T Consensus 77 -aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~ 131 (326)
T 2zqz_A 77 -ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVDIL 131 (326)
T ss_dssp -CSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSHHHH
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcHHHH
Confidence 9999866554421 2345777778889999999999998875
No 82
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=92.14 E-value=0.12 Score=51.11 Aligned_cols=108 Identities=9% Similarity=0.099 Sum_probs=66.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhcccC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vk 411 (461)
.||.|+|||+.|..+|-+|+.. ++ ...|+|+|.+-=-.++-...|.+.. +|..+..-..+..+++++
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~~-~~~~~~~v~~~~~~a~~~-- 72 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ-----GI-----AEEFVIVDVVKDRTKGDALDLEDAQ-AFTAPKKIYSGEYSDCKD-- 72 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHGGG-GGSCCCEEEECCGGGGTT--
T ss_pred CEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHHHHHHHHHHHHH-HhcCCeEEEECCHHHhCC--
Confidence 6999999999999988876543 44 3689999973100000000021111 232211001234677887
Q ss_pred CcEEEeccCCCCC--------------CCHHHHHHHhcCCCCcEEEEcCCCCchh
Q 012553 412 PTILIGSSGVGRT--------------FTKEVIEAMASFNEVVFQALLWLIRKFN 452 (461)
Q Consensus 412 ptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIF~Lsnp~~~~ 452 (461)
+|++|=+.+.+.. +-+++++.|.+++...+|+-.+||-..+
T Consensus 73 aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~ 127 (318)
T 1ez4_A 73 ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPVDIL 127 (318)
T ss_dssp CSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHH
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcHHHH
Confidence 9999855544421 2345777788899999999999998875
No 83
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=92.12 E-value=0.32 Score=49.35 Aligned_cols=157 Identities=15% Similarity=0.087 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHHHhcCCCeeeeeecCCcccHHHHHHHHcCCCcee-ccC---------CCchhHHHHHHHHHHHHHh-CC
Q 012553 259 AELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVF-NDD---------IQGTASVVLAGVVAALKLI-GG 327 (461)
Q Consensus 259 ~~~idefv~av~~~fGp~~lIq~EDf~~~~af~iL~ryr~~~~~F-nDD---------iQGTaaV~LAgll~Alk~~-g~ 327 (461)
++++..|.+++.+..|+ -|-=+|++..- +.+...-+++.++ --- ---||-=+.-++..+++.. |.
T Consensus 93 ~~~~r~~~~~~~~l~g~--~i~A~D~Gt~~--~~m~~l~~~~~~~tGK~~~~ggs~~~~~aTg~GV~~~~~~~~~~~~G~ 168 (364)
T 1leh_A 93 EDMFRALGRFIQGLNGR--YITAEDVGTTV--DDMDLIHQETDYVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKEAFGS 168 (364)
T ss_dssp HHHHHHHHHHHHTTTTS--EEBCBCTTCCH--HHHHHHHTTCSCBCSCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHhcCc--eEEcccCCCCH--HHHHHHHHhcchhcccccccCCCCCcccchhhHHHHHHHHHHHhhccc
Confidence 35677778888887765 46667887533 2334333333111 111 0134444444555666664 76
Q ss_pred -CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHh
Q 012553 328 -TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (461)
Q Consensus 328 -~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~ea 406 (461)
+|++.+|+|.|+|..|..+|+.+... |. ++++.|++ + +.+.++.+.|-- ..-++.+.
T Consensus 169 ~~L~GktV~V~G~G~VG~~~A~~L~~~-----Ga-------kVvv~D~~------~-~~l~~~a~~~ga---~~v~~~~l 226 (364)
T 1leh_A 169 DSLEGLAVSVQGLGNVAKALCKKLNTE-----GA-------KLVVTDVN------K-AAVSAAVAEEGA---DAVAPNAI 226 (364)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC------H-HHHHHHHHHHCC---EECCGGGT
T ss_pred cCCCcCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEcCC------H-HHHHHHHHHcCC---EEEChHHH
Confidence 89999999999999999999998653 63 57888852 1 113223322211 11133343
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcCC
Q 012553 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLWL 447 (461)
Q Consensus 407 V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Lsn 447 (461)
.. .+.|++|=++ ..+.++++.++.|. -.+|.--+|
T Consensus 227 l~-~~~DIvip~a-~~~~I~~~~~~~lg----~~iV~e~An 261 (364)
T 1leh_A 227 YG-VTCDIFAPCA-LGAVLNDFTIPQLK----AKVIAGSAD 261 (364)
T ss_dssp TT-CCCSEEEECS-CSCCBSTTHHHHCC----CSEECCSCS
T ss_pred hc-cCCcEeeccc-hHHHhCHHHHHhCC----CcEEEeCCC
Confidence 33 4689998654 45589988888872 457765555
No 84
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=92.09 E-value=0.13 Score=43.73 Aligned_cols=31 Identities=23% Similarity=0.395 Sum_probs=25.5
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 333 riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.|+|+|||.||+..|..|.+. |+ ++.++|+.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~-----G~-------~V~v~Ek~ 34 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAA-----GH-------QVHLFDKS 34 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEECC
Confidence 489999999999999988763 76 57788864
No 85
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.91 E-value=0.28 Score=46.85 Aligned_cols=49 Identities=18% Similarity=0.269 Sum_probs=39.9
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 315 LAgll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
-.|++.+++-.|.++++.+++|+|||.+|.++|..+... | .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~l~~k~vlViGaGg~g~a~a~~L~~~-----G-------~~V~v~~R~ 151 (271)
T 1nyt_A 103 GVGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSL-----D-------CAVTITNRT 151 (271)
T ss_dssp HHHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred HHHHHHHHHhcCcCcCCCEEEEECCcHHHHHHHHHHHHc-----C-------CEEEEEECC
Confidence 567788888888899999999999998888888887652 4 378888874
No 86
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=91.85 E-value=0.73 Score=42.66 Aligned_cols=37 Identities=19% Similarity=0.350 Sum_probs=27.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
..||.|+|+|..|.++|..+... |.. ...+++++|+.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~-----g~~---~~~~v~~~~~~ 40 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANA-----NII---KKENLFYYGPS 40 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHH-----TSS---CGGGEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-----CCC---CCCeEEEEeCC
Confidence 35899999999999999988654 421 11468888874
No 87
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=91.79 E-value=1.3 Score=42.11 Aligned_cols=119 Identities=19% Similarity=0.184 Sum_probs=73.5
Q ss_pred eecCCcccHHHHHHHHcC------CCceeccCCCchhHHHHHHHHHHHHHh-CCCcccceEEEeC-cchHHHHHHHHHHH
Q 012553 281 FEDFANHNAFELLAKYGT------THLVFNDDIQGTASVVLAGVVAALKLI-GGTLAEHRFLFLG-AGEAGTGIAELIAL 352 (461)
Q Consensus 281 ~EDf~~~~af~iL~ryr~------~~~~FnDDiQGTaaV~LAgll~Alk~~-g~~l~d~riv~~G-AGsAgiGiA~ll~~ 352 (461)
++-..-..+.+++++-+. +..+| .|..|.- ..-.|++.+++-. +.++++.+++|.| +|.+|.++|..+..
T Consensus 64 ~~G~~~~~~~~~~~~~~~~~~gavnt~~~-~~~~G~n-Td~~g~~~~l~~~~~~~l~gk~vlVtGaaGGiG~aia~~L~~ 141 (287)
T 1lu9_A 64 VGGGDMAAGERVFEAVKKRFFGPFRVSCM-LDSNGSN-TTAAAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAG 141 (287)
T ss_dssp EECSCHHHHHHHHHHHHHHCBTTBCCEEE-ECSTTHH-HHHHHHHHHHHHHTTSCCTTCEEEEETCSSHHHHHHHHHHHH
T ss_pred EccchHHHHHHHHHHHHHhcCCCeEEEEe-cCCCcCC-chHHHHHHHHHHhhccCCCCCEEEEECCCcHHHHHHHHHHHH
Confidence 454555577788877652 23344 4455532 2456777788776 7888999999999 89999999988865
Q ss_pred HHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcc---------ccCCCCCHHHhhcccCCcEEEeccCCC
Q 012553 353 EISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH---------EHEPVNNLLDAVKVIKPTILIGSSGVG 422 (461)
Q Consensus 353 ~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~---------~~~~~~~L~eaV~~vkptvLIG~S~~~ 422 (461)
. |. +++++|++- .+ .....+.+.. +.....++.++++. .|++|=.++.+
T Consensus 142 ~-----G~-------~V~i~~R~~----~~---~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~DvlVn~ag~g 199 (287)
T 1lu9_A 142 E-----GA-------EVVLCGRKL----DK---AQAAADSVNKRFKVNVTAAETADDASRAEAVKG--AHFVFTAGAIG 199 (287)
T ss_dssp T-----TC-------EEEEEESSH----HH---HHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTT--CSEEEECCCTT
T ss_pred C-----cC-------EEEEEECCH----HH---HHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHh--CCEEEECCCcc
Confidence 2 52 488888741 11 1111111111 11111245677776 79999887654
No 88
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=91.79 E-value=0.15 Score=50.92 Aligned_cols=110 Identities=12% Similarity=0.128 Sum_probs=68.6
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhcc
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~ 409 (461)
...||.|+|||..|.++|..|+.. |+ ...+.++|..-=..++-.-.|.+. .+|.....-..+..+++++
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~i~~~~~~a~~~ 76 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLEDA-LPFTSPKKIYSAEYSDAKD 76 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTT-GGGSCCCEEEECCGGGGTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCChHHHHHHHhhHhhh-hhhcCCcEEEECcHHHhcC
Confidence 346899999999999999888763 54 258999998310000000012221 1232111111234567877
Q ss_pred cCCcEEEeccCCC---C-----CC------CHHHHHHHhcCCCCcEEEEcCCCCchh
Q 012553 410 IKPTILIGSSGVG---R-----TF------TKEVIEAMASFNEVVFQALLWLIRKFN 452 (461)
Q Consensus 410 vkptvLIG~S~~~---g-----~F------t~evv~~Ma~~~erPIIF~Lsnp~~~~ 452 (461)
+|++|=+.+.+ | +| -+++++.|++++...+|+-.|||-+.+
T Consensus 77 --aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNPvdi~ 131 (326)
T 3vku_A 77 --ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVDIL 131 (326)
T ss_dssp --CSEEEECCCCC----------------CHHHHHHHHHTTTCCSEEEECSSSHHHH
T ss_pred --CCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCchHHH
Confidence 89887544433 1 22 368889999999999999999998865
No 89
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=91.75 E-value=0.16 Score=51.12 Aligned_cols=95 Identities=18% Similarity=0.240 Sum_probs=61.4
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccc----cCCCCCH
Q 012553 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE----HEPVNNL 403 (461)
Q Consensus 328 ~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~----~~~~~~L 403 (461)
.+...+++|+|+|..|..+|+.+... |. +++.+|+.. .+ +...++.+... .....++
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~-----Ga-------~V~~~d~~~----~~---l~~~~~~~g~~~~~~~~~~~~l 225 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGM-----GA-------TVTVLDINI----DK---LRQLDAEFCGRIHTRYSSAYEL 225 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESCH----HH---HHHHHHHTTTSSEEEECCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEeCCH----HH---HHHHHHhcCCeeEeccCCHHHH
Confidence 47789999999999999999887542 52 688888741 11 11111112110 0012357
Q ss_pred HHhhcccCCcEEEeccCCC-----CCCCHHHHHHHhcCCCCcEEEEcC
Q 012553 404 LDAVKVIKPTILIGSSGVG-----RTFTKEVIEAMASFNEVVFQALLW 446 (461)
Q Consensus 404 ~eaV~~vkptvLIG~S~~~-----g~Ft~evv~~Ma~~~erPIIF~Ls 446 (461)
.+.++. .|++|.+.+.+ ..++++.++.|.+ .-+|.-+|
T Consensus 226 ~~~l~~--aDvVi~~~~~p~~~t~~li~~~~l~~mk~---g~~iV~va 268 (377)
T 2vhw_A 226 EGAVKR--ADLVIGAVLVPGAKAPKLVSNSLVAHMKP---GAVLVDIA 268 (377)
T ss_dssp HHHHHH--CSEEEECCCCTTSCCCCCBCHHHHTTSCT---TCEEEEGG
T ss_pred HHHHcC--CCEEEECCCcCCCCCcceecHHHHhcCCC---CcEEEEEe
Confidence 788876 89999876544 3579999999965 34555555
No 90
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=91.74 E-value=0.11 Score=51.19 Aligned_cols=110 Identities=10% Similarity=0.124 Sum_probs=68.6
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhc-cccCCCCCHHHhhc
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-HEHEPVNNLLDAVK 408 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA-~~~~~~~~L~eaV~ 408 (461)
...||.|+|||..|..+|-.|+.. |+ ...++++|.+-=..++....+.+. .+|. .+..-..+..++++
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~-----~~-----~~ei~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~~~~~a~~ 73 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQ-----SI-----VDELVIIDLDTEKVRGDVMDLKHA-TPYSPTTVRVKAGEYSDCH 73 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-----CS-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSSSCCEEEECCGGGGT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHhhhhhhhHHhh-hhhcCCCeEEEeCCHHHhC
Confidence 446999999999999998876542 54 258999997510000000012221 2332 11000114477888
Q ss_pred ccCCcEEEeccCCCCC--------------CCHHHHHHHhcCCCCcEEEEcCCCCchh
Q 012553 409 VIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEVVFQALLWLIRKFN 452 (461)
Q Consensus 409 ~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIF~Lsnp~~~~ 452 (461)
+ +|++|=+.+.+.. +=+++++.|.+++..-+|+-.|||-..+
T Consensus 74 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv~~~ 129 (317)
T 3d0o_A 74 D--ADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPVDIL 129 (317)
T ss_dssp T--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHH
T ss_pred C--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcHHHH
Confidence 7 9999865554421 2246777888889999999999998775
No 91
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=91.60 E-value=0.21 Score=47.75 Aligned_cols=49 Identities=24% Similarity=0.352 Sum_probs=40.4
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 315 LAgll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
-.|++.+++-.|..++..+++|+|||.+|.++|..+... | .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~~~~~~vlvlGaGg~g~a~a~~L~~~-----G-------~~v~v~~R~ 151 (272)
T 1p77_A 103 GIGLVTDLQRLNWLRPNQHVLILGAGGATKGVLLPLLQA-----Q-------QNIVLANRT 151 (272)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHT-----T-------CEEEEEESS
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHHC-----C-------CEEEEEECC
Confidence 567888888888889999999999999999998887652 4 478888874
No 92
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=91.55 E-value=0.095 Score=43.32 Aligned_cols=104 Identities=12% Similarity=0.118 Sum_probs=53.5
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcc-ccCCCCCHHHh-
Q 012553 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA- 406 (461)
Q Consensus 329 l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~ea- 406 (461)
++..+|+|+|+|..|..+|+.+... |. +++++|++- .+.+.+......+.. +......|.++
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~~-----g~-------~v~~~d~~~----~~~~~~~~~~~~~~~~d~~~~~~l~~~~ 67 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHRM-----GH-------EVLAVDINE----EKVNAYASYATHAVIANATEENELLSLG 67 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHT-----TC-------CCEEEESCH----HHHHTTTTTCSEEEECCTTCHHHHHTTT
T ss_pred CcCCcEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCCH----HHHHHHHHhCCEEEEeCCCCHHHHHhcC
Confidence 4567899999999999999888642 42 577888742 111111111001111 11111223333
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcCCCCc
Q 012553 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLWLIRK 450 (461)
Q Consensus 407 V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Lsnp~~ 450 (461)
++ ++|++|=+.+..-..+..+++...+.+...||...+||..
T Consensus 68 ~~--~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~ 109 (144)
T 2hmt_A 68 IR--NFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYYH 109 (144)
T ss_dssp GG--GCSEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCSHHH
T ss_pred CC--CCCEEEECCCCchHHHHHHHHHHHHcCCCeEEEEeCCHHH
Confidence 44 4899996655320122234444444455567777777654
No 93
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=91.49 E-value=0.55 Score=47.12 Aligned_cols=103 Identities=16% Similarity=0.201 Sum_probs=63.5
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccC--C-----cCCCChhhhhhccc---
Q 012553 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSS--R-----KDSLQHFKKPWAHE--- 396 (461)
Q Consensus 327 ~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~--R-----~~~L~~~k~~fA~~--- 396 (461)
.+|++.||+|+|+|..|..+|+.|+.+ |+ .+|.++|.+=+=..+ | .+++-..|..-+.+
T Consensus 114 ~~L~~~~VlvvG~GglGs~va~~La~a-----Gv------g~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~ 182 (353)
T 3h5n_A 114 DKLKNAKVVILGCGGIGNHVSVILATS-----GI------GEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELL 182 (353)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHH
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHhC-----CC------CeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHH
Confidence 457889999999999999999999876 64 689999986321111 0 00111112211110
Q ss_pred --cC---------CC--CC-HHHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEE
Q 012553 397 --HE---------PV--NN-LLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQAL 444 (461)
Q Consensus 397 --~~---------~~--~~-L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~ 444 (461)
.+ .. .+ +.+ ++. .|++|-++... .-+...|...+.....|.|.+
T Consensus 183 ~~np~v~v~~~~~~i~~~~~~~~-~~~--~DlVvd~~Dn~-~~~r~~ln~~c~~~~~p~i~~ 240 (353)
T 3h5n_A 183 KRNSEISVSEIALNINDYTDLHK-VPE--ADIWVVSADHP-FNLINWVNKYCVRANQPYINA 240 (353)
T ss_dssp HHCTTSEEEEEECCCCSGGGGGG-SCC--CSEEEECCCCS-TTHHHHHHHHHHHTTCCEEEE
T ss_pred HHCCCCeEEEeecccCchhhhhH-hcc--CCEEEEecCCh-HHHHHHHHHHHHHhCCCEEEE
Confidence 01 11 11 445 554 89998765422 116778888887788999865
No 94
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=91.26 E-value=0.19 Score=46.91 Aligned_cols=97 Identities=13% Similarity=0.169 Sum_probs=51.5
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHh
Q 012553 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (461)
Q Consensus 327 ~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~ea 406 (461)
.++...||.|+|+|..|..+|..+... |. +.++++|+.. +.+....+.+ ......++.|+
T Consensus 6 ~~~~~m~i~iiG~G~mG~~~a~~l~~~-----g~------~~v~~~~~~~-------~~~~~~~~~~--g~~~~~~~~~~ 65 (266)
T 3d1l_A 6 RSIEDTPIVLIGAGNLATNLAKALYRK-----GF------RIVQVYSRTE-------ESARELAQKV--EAEYTTDLAEV 65 (266)
T ss_dssp -CGGGCCEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSH-------HHHHHHHHHT--TCEEESCGGGS
T ss_pred cCCCCCeEEEEcCCHHHHHHHHHHHHC-----CC------eEEEEEeCCH-------HHHHHHHHHc--CCceeCCHHHH
Confidence 345567999999999999999988653 53 2477787631 1111111111 00012345555
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHhcCC-CCcEEEEcCC
Q 012553 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EVVFQALLWL 447 (461)
Q Consensus 407 V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIF~Lsn 447 (461)
++. +|++|=+.. ... .+++++.+.+.. +..+|.-++|
T Consensus 66 ~~~--~Dvvi~av~-~~~-~~~v~~~l~~~~~~~~ivv~~s~ 103 (266)
T 3d1l_A 66 NPY--AKLYIVSLK-DSA-FAELLQGIVEGKREEALMVHTAG 103 (266)
T ss_dssp CSC--CSEEEECCC-HHH-HHHHHHHHHTTCCTTCEEEECCT
T ss_pred hcC--CCEEEEecC-HHH-HHHHHHHHHhhcCCCcEEEECCC
Confidence 553 666663322 222 256666655433 3445555555
No 95
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=91.26 E-value=1.4 Score=44.80 Aligned_cols=161 Identities=18% Similarity=0.146 Sum_probs=98.7
Q ss_pred hhhHHHHHHHHHHHHHhcCCCeeeeeecCCccc--HHHHHHHHcC---CCcee---ccCCCchhHHHHHHHHHHHHHhCC
Q 012553 256 QEYAELLDEFMSAVKQNYGEKVLIQFEDFANHN--AFELLAKYGT---THLVF---NDDIQGTASVVLAGVVAALKLIGG 327 (461)
Q Consensus 256 ~~Y~~~idefv~av~~~fGp~~lIq~EDf~~~~--af~iL~ryr~---~~~~F---nDDiQGTaaV~LAgll~Alk~~g~ 327 (461)
.+-++++..|.+++.+..|+ -|-=+|++..- ---+.+.|+. +-..+ .|--.-||-=+.-++-.+++..|.
T Consensus 93 ~~~e~~~r~~~~~~~~l~g~--~ipa~D~gt~~~~m~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~G~ 170 (355)
T 1c1d_A 93 STWARILRIHAENIDKLSGN--YWTGPDVNTNSADMDTLNDTTEFVFGRSLERGGAGSSAFTTAVGVFEAMKATVAHRGL 170 (355)
T ss_dssp HHHHHHHHHHHHHHHHTTTS--EEEEECTTCCHHHHHHHHHHCSCBCCCCGGGTSCCCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHHHHHHhcCC--cccCCCCCCCHHHHHHHHHhcCeeeccchhhCCCCCchhHHHHHHHHHHHHHHHhcCC
Confidence 45567788888888887765 46778987532 2234555651 11111 111123666666677788888898
Q ss_pred -CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHh
Q 012553 328 -TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (461)
Q Consensus 328 -~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~ea 406 (461)
+|++.+++|.|.|..|..+|+.+.. .|. ++++.|++- .| .++.+.|- ...-++.+.
T Consensus 171 ~~L~GktV~I~G~GnVG~~~A~~l~~-----~Ga-------kVvvsD~~~----~~----~~~a~~~g---a~~v~~~el 227 (355)
T 1c1d_A 171 GSLDGLTVLVQGLGAVGGSLASLAAE-----AGA-------QLLVADTDT----ER----VAHAVALG---HTAVALEDV 227 (355)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCH----HH----HHHHHHTT---CEECCGGGG
T ss_pred CCCCCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEeCCc----cH----HHHHHhcC---CEEeChHHh
Confidence 8999999999999999999998754 363 677888741 11 11111121 001134444
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcCC
Q 012553 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLWL 447 (461)
Q Consensus 407 V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Lsn 447 (461)
.+ ++.|+|+=++ ..+.++++-++.|. -.||.--+|
T Consensus 228 l~-~~~DIliP~A-~~~~I~~~~~~~lk----~~iVie~AN 262 (355)
T 1c1d_A 228 LS-TPCDVFAPCA-MGGVITTEVARTLD----CSVVAGAAN 262 (355)
T ss_dssp GG-CCCSEEEECS-CSCCBCHHHHHHCC----CSEECCSCT
T ss_pred hc-CccceecHhH-HHhhcCHHHHhhCC----CCEEEECCC
Confidence 33 3578887543 45588888887773 356665555
No 96
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=91.12 E-value=0.19 Score=49.44 Aligned_cols=107 Identities=16% Similarity=0.126 Sum_probs=67.6
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcccc--CCCCCHHHhhccc
Q 012553 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVKVI 410 (461)
Q Consensus 333 riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~--~~~~~L~eaV~~v 410 (461)
||.|+|||..|.++|..|... |+ ...+.++|.+-=..++-.-.+.+...+|-.+. ....+ .+++++
T Consensus 2 kI~ViGaG~vG~~la~~l~~~-----~~-----~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~- 69 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKG- 69 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCC-
Confidence 799999999999999887653 54 24799999742111100000222111121110 01135 788888
Q ss_pred CCcEEEeccCCC---CC-----------CCHHHHHHHhcCCCCcEEEEcCCCCchh
Q 012553 411 KPTILIGSSGVG---RT-----------FTKEVIEAMASFNEVVFQALLWLIRKFN 452 (461)
Q Consensus 411 kptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIF~Lsnp~~~~ 452 (461)
+|++|=+.+.+ |. +-+++++.|.+++..-+|+-.|||-+.+
T Consensus 70 -aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNPvd~~ 124 (294)
T 1oju_A 70 -SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMDVM 124 (294)
T ss_dssp -CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSHHHH
T ss_pred -CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcchHH
Confidence 89887554433 32 1257778889999999999999998876
No 97
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=91.08 E-value=0.2 Score=52.42 Aligned_cols=109 Identities=14% Similarity=0.163 Sum_probs=68.3
Q ss_pred cccceEEEeCcchH--HHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcc---ccCCCCCH
Q 012553 329 LAEHRFLFLGAGEA--GTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH---EHEPVNNL 403 (461)
Q Consensus 329 l~d~riv~~GAGsA--giGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~---~~~~~~~L 403 (461)
.+..||.|+|||+. |.|++..|+.. ..+ . ..|+|+|.+- ++-+.+....+.+.+ .-....++
T Consensus 3 m~~~KIaVIGaGs~g~g~~la~~l~~~----~~~----~-geV~L~Di~~----e~le~~~~~~~~l~~~~~~I~~TtD~ 69 (450)
T 3fef_A 3 LDQIKIAYIGGGSQGWARSLMSDLSID----ERM----S-GTVALYDLDF----EAAQKNEVIGNHSGNGRWRYEAVSTL 69 (450)
T ss_dssp CCCEEEEEETTTCSSHHHHHHHHHHHC----SSC----C-EEEEEECSSH----HHHHHHHHHHTTSTTSCEEEEEESSH
T ss_pred CCCCEEEEECCChhHhHHHHHHHHHhc----ccc----C-CeEEEEeCCH----HHHHHHHHHHHHHhccCCeEEEECCH
Confidence 34679999999995 78999888742 122 2 3899999752 110000000000111 00112589
Q ss_pred HHhhcccCCcEEEeccCCC---------------CC---------------------CCHHHHHHHhcCCCCcEEEEcCC
Q 012553 404 LDAVKVIKPTILIGSSGVG---------------RT---------------------FTKEVIEAMASFNEVVFQALLWL 447 (461)
Q Consensus 404 ~eaV~~vkptvLIG~S~~~---------------g~---------------------Ft~evv~~Ma~~~erPIIF~Lsn 447 (461)
.||+++ +|++|=.-.+| |. .-.++++.|.+++..-+++-.||
T Consensus 70 ~eAl~d--ADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tN 147 (450)
T 3fef_A 70 KKALSA--ADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTN 147 (450)
T ss_dssp HHHHTT--CSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred HHHhcC--CCEEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 999998 89888333221 11 13577888889999999999999
Q ss_pred CCchh
Q 012553 448 IRKFN 452 (461)
Q Consensus 448 p~~~~ 452 (461)
|-..+
T Consensus 148 Pvdi~ 152 (450)
T 3fef_A 148 PMSVC 152 (450)
T ss_dssp SHHHH
T ss_pred chHHH
Confidence 98754
No 98
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=90.91 E-value=0.24 Score=48.87 Aligned_cols=102 Identities=16% Similarity=0.163 Sum_probs=64.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhh------hccccCCCCCHHH
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP------WAHEHEPVNNLLD 405 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~------fA~~~~~~~~L~e 405 (461)
.||.|+|||..|..+|-.++.. |+ ...++++|.+ .++ +...... |.++..-..+-.+
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~ev~L~Di~----~~~---~~g~~~dl~~~~~~~~~~~i~~~~~~ 70 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALR-----QT-----ANELVLIDVF----KEK---AIGEAMDINHGLPFMGQMSLYAGDYS 70 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TC-----SSEEEEECCC----------CCHHHHHHTTSCCCTTCEEEC--CGG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCC----hHH---HHHHHHHHHHhHHhcCCeEEEECCHH
Confidence 5899999999999988876542 44 2589999975 222 1111111 2111000012266
Q ss_pred hhcccCCcEEEeccCCCCCC--------------CHHHHHHHhcCCCCcEEEEcCCCCchh
Q 012553 406 AVKVIKPTILIGSSGVGRTF--------------TKEVIEAMASFNEVVFQALLWLIRKFN 452 (461)
Q Consensus 406 aV~~vkptvLIG~S~~~g~F--------------t~evv~~Ma~~~erPIIF~Lsnp~~~~ 452 (461)
++++ +|++|=+.+.+..- -+++++.|.+++..-+|+-.+||-..+
T Consensus 71 a~~~--aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv~~~ 129 (318)
T 1y6j_A 71 DVKD--CDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVDII 129 (318)
T ss_dssp GGTT--CSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSHHHH
T ss_pred HhCC--CCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcHHHH
Confidence 7877 99998655544211 268889999888899999999998765
No 99
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=90.90 E-value=1.3 Score=43.41 Aligned_cols=54 Identities=19% Similarity=0.244 Sum_probs=41.2
Q ss_pred hhHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEE
Q 012553 310 TASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICL 371 (461)
Q Consensus 310 TaaV~LAgll~Alk~------------------~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~l 371 (461)
+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+... |+ +++.
T Consensus 103 vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~-----G~-------~V~~ 170 (307)
T 1wwk_A 103 VAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIELEGKTIGIIGFGRIGYQVAKIANAL-----GM-------NILL 170 (307)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEE
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHcCCCCccCcCCcccCCceEEEEccCHHHHHHHHHHHHC-----CC-------EEEE
Confidence 444467777777662 34678999999999999999999988642 53 6888
Q ss_pred EcCC
Q 012553 372 VDSK 375 (461)
Q Consensus 372 vDs~ 375 (461)
+|+.
T Consensus 171 ~d~~ 174 (307)
T 1wwk_A 171 YDPY 174 (307)
T ss_dssp ECSS
T ss_pred ECCC
Confidence 8874
No 100
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=90.81 E-value=0.42 Score=46.41 Aligned_cols=96 Identities=13% Similarity=0.093 Sum_probs=52.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC--------ccccCCcCCCChhhhhhccccCCCCCH
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG--------LIVSSRKDSLQHFKKPWAHEHEPVNNL 403 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G--------Li~~~R~~~L~~~k~~fA~~~~~~~~L 403 (461)
.||.|+|||+-|..+|..|..+ | .+++++|+.- +...++. ...++ + .+.....++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~~~i~~~Gl~~~~~~--~g~~~--~-~~~~~~~~~ 65 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-----G-------HCVSVVSRSDYETVKAKGIRIRSAT--LGDYT--F-RPAAVVRSA 65 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-----T-------CEEEEECSTTHHHHHHHCEEEEETT--TCCEE--E-CCSCEESCG
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCChHHHHHhCCcEEeecC--CCcEE--E-eeeeeECCH
Confidence 5899999999999999988653 4 3688888753 1111100 00000 0 000011345
Q ss_pred HHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCC-CCcEEEEcCCC
Q 012553 404 LDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EVVFQALLWLI 448 (461)
Q Consensus 404 ~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIF~Lsnp 448 (461)
.++.+. +|++| ++... ..++++++.++... +..+|+.+.|-
T Consensus 66 ~~~~~~--~DlVi-lavK~-~~~~~~l~~l~~~l~~~t~Iv~~~nG 107 (320)
T 3i83_A 66 AELETK--PDCTL-LCIKV-VEGADRVGLLRDAVAPDTGIVLISNG 107 (320)
T ss_dssp GGCSSC--CSEEE-ECCCC-CTTCCHHHHHTTSCCTTCEEEEECSS
T ss_pred HHcCCC--CCEEE-EecCC-CChHHHHHHHHhhcCCCCEEEEeCCC
Confidence 555433 67766 44433 34557777776543 34556666664
No 101
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=90.78 E-value=0.14 Score=51.07 Aligned_cols=113 Identities=12% Similarity=0.070 Sum_probs=69.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcccc-CCCCCHHHhhcc
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH-EPVNNLLDAVKV 409 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~-~~~~~L~eaV~~ 409 (461)
-.||.|+|||..|.++|..|+.. |+ ...+.++|.+-=..++-.-.|.+. .+|.... .-..+-.+++++
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~-----~~-----~~~l~l~D~~~~k~~g~a~DL~~~-~~~~~~~v~i~~~~~~a~~~ 73 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQ-----GI-----TDELVVIDVNKEKAMGDVMDLNHG-KAFAPQPVKTSYGTYEDCKD 73 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHHT-GGGSSSCCEEEEECGGGGTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CceEEEEecchHHHHHHHHHHHhc-cccccCCeEEEeCcHHHhCC
Confidence 46899999999999999988753 54 258999997310000000002222 2332110 001223467776
Q ss_pred cCCcEEEeccCCC---CC-----------CCHHHHHHHhcCCCCcEEEEcCCCCchhhhhhh
Q 012553 410 IKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEVVFQALLWLIRKFNFCSLF 457 (461)
Q Consensus 410 vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIF~Lsnp~~~~~~~~~ 457 (461)
+|++|=+.+.+ |- .-+++++.+++++...+|+-.+||-+.+ |..+
T Consensus 74 --aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNPvd~~-t~~~ 132 (326)
T 3pqe_A 74 --ADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNPVDIL-TYAT 132 (326)
T ss_dssp --CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHH-HHHH
T ss_pred --CCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCChHHHH-HHHH
Confidence 89887444432 31 1267788888999999999999998876 4443
No 102
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=90.72 E-value=0.5 Score=46.13 Aligned_cols=103 Identities=16% Similarity=0.156 Sum_probs=62.7
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCC----Chhhhhhcccc--CCCCCHHHh
Q 012553 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL----QHFKKPWAHEH--EPVNNLLDA 406 (461)
Q Consensus 333 riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L----~~~k~~fA~~~--~~~~~L~ea 406 (461)
||.|+|||..|.++|..+... ++ -.+++++|.+- ++-+.+ .+....+.... ....++.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~-----~~-----g~~V~l~D~~~----~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~- 66 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEK-----QL-----ARELVLLDVVE----GIPQGKALDMYESGPVGLFDTKVTGSNDYAD- 66 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSS----SHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCh----hHHHHHHHhHHhhhhcccCCcEEEECCCHHH-
Confidence 799999999999999887542 21 25799999852 111101 10000010110 01145655
Q ss_pred hcccCCcEEEeccCCC---CC-----------CCHHHHHHHhcCCCCcEEEEcCCCCchh
Q 012553 407 VKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEVVFQALLWLIRKFN 452 (461)
Q Consensus 407 V~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIF~Lsnp~~~~ 452 (461)
++. +|++|=+.+.+ |- +-+++++.|++++...+|+-.+||-..+
T Consensus 67 l~~--aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~~~~ 124 (310)
T 1guz_A 67 TAN--SDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPLDIM 124 (310)
T ss_dssp GTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSHHHH
T ss_pred HCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCchHHH
Confidence 776 89888554332 21 1157778888888888888899998765
No 103
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=90.70 E-value=2.6 Score=42.40 Aligned_cols=121 Identities=15% Similarity=0.095 Sum_probs=74.7
Q ss_pred CCCceeccCC---CchhHHHHHHHHHHHHH---------------------hCCCcccceEEEeCcchHHHHHHHHHHHH
Q 012553 298 TTHLVFNDDI---QGTASVVLAGVVAALKL---------------------IGGTLAEHRFLFLGAGEAGTGIAELIALE 353 (461)
Q Consensus 298 ~~~~~FnDDi---QGTaaV~LAgll~Alk~---------------------~g~~l~d~riv~~GAGsAgiGiA~ll~~~ 353 (461)
..|+|.|--- +.+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|..+|+.+...
T Consensus 116 ~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~ 195 (345)
T 4g2n_A 116 LGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIGRAIATRARGF 195 (345)
T ss_dssp TTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHHHHHHHHHHTT
T ss_pred CCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChhHHHHHHHHHHC
Confidence 4566666532 23455578888877763 25678999999999999999999988632
Q ss_pred HHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhcccCCcEEEeccC----CCCCCCHHH
Q 012553 354 ISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEV 429 (461)
Q Consensus 354 m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkptvLIG~S~----~~g~Ft~ev 429 (461)
|+ +++.+|+... +... +.......+|.|+++. .|+++=.-- .-+.|+++.
T Consensus 196 -----G~-------~V~~~dr~~~---------~~~~---~~g~~~~~~l~ell~~--sDvV~l~~Plt~~T~~li~~~~ 249 (345)
T 4g2n_A 196 -----GL-------AIHYHNRTRL---------SHAL---EEGAIYHDTLDSLLGA--SDIFLIAAPGRPELKGFLDHDR 249 (345)
T ss_dssp -----TC-------EEEEECSSCC---------CHHH---HTTCEECSSHHHHHHT--CSEEEECSCCCGGGTTCBCHHH
T ss_pred -----CC-------EEEEECCCCc---------chhh---hcCCeEeCCHHHHHhh--CCEEEEecCCCHHHHHHhCHHH
Confidence 54 6888887531 0000 0010112467777776 677663321 125677777
Q ss_pred HHHHhcCCCCcEEEEcCC
Q 012553 430 IEAMASFNEVVFQALLWL 447 (461)
Q Consensus 430 v~~Ma~~~erPIIF~Lsn 447 (461)
++.|.+ ..|+.=.|.
T Consensus 250 l~~mk~---gailIN~aR 264 (345)
T 4g2n_A 250 IAKIPE---GAVVINISR 264 (345)
T ss_dssp HHHSCT---TEEEEECSC
T ss_pred HhhCCC---CcEEEECCC
Confidence 777754 455554443
No 104
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=90.63 E-value=2 Score=42.52 Aligned_cols=136 Identities=10% Similarity=0.044 Sum_probs=78.3
Q ss_pred eeeecCCcccHHHHHHHHcCCCceeccCCCc---hhHHHHHHHHHHHHH-------------------hCCCcccceEEE
Q 012553 279 IQFEDFANHNAFELLAKYGTTHLVFNDDIQG---TASVVLAGVVAALKL-------------------IGGTLAEHRFLF 336 (461)
Q Consensus 279 Iq~EDf~~~~af~iL~ryr~~~~~FnDDiQG---TaaV~LAgll~Alk~-------------------~g~~l~d~riv~ 336 (461)
|+.--.+..|- .+..--+..|+|.|---.. +|=-+++.+|+..|- .|..+.+.+|.|
T Consensus 73 I~~~~~G~d~i-d~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgI 151 (331)
T 1xdw_A 73 ILTRTAGTDHI-DKEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTVGV 151 (331)
T ss_dssp EEESSSCCTTB-CHHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEEEE
T ss_pred EEEcccccccc-CHHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccCcCccCCCCCEEEE
Confidence 55444444432 2211223567777753333 344478888877761 235688999999
Q ss_pred eCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhcccCCcEEE
Q 012553 337 LGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILI 416 (461)
Q Consensus 337 ~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkptvLI 416 (461)
+|.|..|..+|+.+... |+ +++.+|+.. .. . +. .++. ..+|.|+++. .|+++
T Consensus 152 iG~G~IG~~~A~~l~~~-----G~-------~V~~~d~~~----~~-~-~~----~~~~----~~~l~ell~~--aDvV~ 203 (331)
T 1xdw_A 152 VGLGRIGRVAAQIFHGM-----GA-------TVIGEDVFE----IK-G-IE----DYCT----QVSLDEVLEK--SDIIT 203 (331)
T ss_dssp ECCSHHHHHHHHHHHHT-----TC-------EEEEECSSC----CC-S-CT----TTCE----ECCHHHHHHH--CSEEE
T ss_pred ECcCHHHHHHHHHHHHC-----CC-------EEEEECCCc----cH-H-HH----hccc----cCCHHHHHhh--CCEEE
Confidence 99999999999988642 54 688888743 11 1 11 1111 1256676665 67666
Q ss_pred ecc----CCCCCCCHHHHHHHhcCCCCcEEEEcC
Q 012553 417 GSS----GVGRTFTKEVIEAMASFNEVVFQALLW 446 (461)
Q Consensus 417 G~S----~~~g~Ft~evv~~Ma~~~erPIIF~Ls 446 (461)
=.- ...++++++.++.|.+ ..++.=.|
T Consensus 204 ~~~p~t~~t~~li~~~~l~~mk~---ga~lin~s 234 (331)
T 1xdw_A 204 IHAPYIKENGAVVTRDFLKKMKD---GAILVNCA 234 (331)
T ss_dssp ECCCCCTTTCCSBCHHHHHTSCT---TEEEEECS
T ss_pred EecCCchHHHHHhCHHHHhhCCC---CcEEEECC
Confidence 421 1234666666666653 34554444
No 105
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=90.56 E-value=0.18 Score=48.57 Aligned_cols=105 Identities=12% Similarity=0.177 Sum_probs=63.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCC-hhhhhhccccC--CCCCHHHhh
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAHEHE--PVNNLLDAV 407 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~-~~k~~fA~~~~--~~~~L~eaV 407 (461)
..||.|+|||+.|..+|..+... |. ..+++++|+.---... ..++ .+..++..... ...+ .+++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~-----g~-----~~~V~l~d~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~-~~~~ 73 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQR-----GI-----AREIVLEDIAKERVEA--EVLDMQHGSSFYPTVSIDGSDD-PEIC 73 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSHHHHHH--HHHHHHHTGGGSTTCEEEEESC-GGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHHHH--HHHHHHhhhhhcCCeEEEeCCC-HHHh
Confidence 36899999999999999887642 53 1479999985310000 0010 00011111100 0013 3566
Q ss_pred cccCCcEEEeccCCCCCCCH----------------HHHHHHhcCCCCcEEEEcCCCCchh
Q 012553 408 KVIKPTILIGSSGVGRTFTK----------------EVIEAMASFNEVVFQALLWLIRKFN 452 (461)
Q Consensus 408 ~~vkptvLIG~S~~~g~Ft~----------------evv~~Ma~~~erPIIF~Lsnp~~~~ 452 (461)
+. +|++|=+.+.+. ++ ++++.|++++...+|+.++||-...
T Consensus 74 ~~--aD~Vii~v~~~~--~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~~~~ 130 (319)
T 1lld_A 74 RD--ADMVVITAGPRQ--KPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVDIA 130 (319)
T ss_dssp TT--CSEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHH
T ss_pred CC--CCEEEECCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCchHHH
Confidence 65 898885554332 23 8888998877788999999997654
No 106
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=90.49 E-value=0.17 Score=53.30 Aligned_cols=108 Identities=14% Similarity=0.147 Sum_probs=66.9
Q ss_pred cceEEEeCcchHH--HHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhc-c--ccCC---CCC
Q 012553 331 EHRFLFLGAGEAG--TGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-H--EHEP---VNN 402 (461)
Q Consensus 331 d~riv~~GAGsAg--iGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA-~--~~~~---~~~ 402 (461)
..||.|+|||+.| .++|..|+.. .++ +...++|+|.+- ++.+........+. . .... ..+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~----~~l----~~~eV~L~Di~~----e~l~~~~~~~~~~l~~~~~~~~I~~ttD 70 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKT----PGL----SGSTVTLMDIDE----ERLDAILTIAKKYVEEVGADLKFEKTMN 70 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTC----GGG----TTCEEEEECSCH----HHHHHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHhc----CcC----CCCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCcEEEEECC
Confidence 4589999999965 5556666531 122 246899999853 11110111111111 1 0111 257
Q ss_pred HHHhhcccCCcEEEeccCCC---------------CCCC-------------------------HHHHHHHhcCCCCcEE
Q 012553 403 LLDAVKVIKPTILIGSSGVG---------------RTFT-------------------------KEVIEAMASFNEVVFQ 442 (461)
Q Consensus 403 L~eaV~~vkptvLIG~S~~~---------------g~Ft-------------------------~evv~~Ma~~~erPII 442 (461)
+.+++++ +|++|=..+.+ |.|. +++++.|.+++..-+|
T Consensus 71 ~~eal~d--AD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~i 148 (480)
T 1obb_A 71 LDDVIID--ADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWY 148 (480)
T ss_dssp HHHHHTT--CSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred HHHHhCC--CCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEE
Confidence 8899998 99988555321 2322 6899999999999999
Q ss_pred EEcCCCCchh
Q 012553 443 ALLWLIRKFN 452 (461)
Q Consensus 443 F~Lsnp~~~~ 452 (461)
+-.|||-..+
T Consensus 149 i~~TNPvdi~ 158 (480)
T 1obb_A 149 LQAANPIFEG 158 (480)
T ss_dssp EECSSCHHHH
T ss_pred EEeCCcHHHH
Confidence 9999997643
No 107
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=90.31 E-value=1.7 Score=43.28 Aligned_cols=38 Identities=18% Similarity=0.266 Sum_probs=31.2
Q ss_pred CCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 326 g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
|..|.+.+|.|+|+|..|.++|+.+.. .|+ +++.+|+.
T Consensus 159 ~~~l~g~~vgIIG~G~iG~~vA~~l~~-----~G~-------~V~~~dr~ 196 (333)
T 3ba1_A 159 TTKFSGKRVGIIGLGRIGLAVAERAEA-----FDC-------PISYFSRS 196 (333)
T ss_dssp CCCCTTCCEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSS
T ss_pred ccccCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEECCC
Confidence 457889999999999999999998754 253 68888875
No 108
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=90.23 E-value=0.3 Score=47.85 Aligned_cols=105 Identities=16% Similarity=0.165 Sum_probs=67.1
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcC--CC-ccccCCcCCCChhhhhhccccCCC----CCHH
Q 012553 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDS--KG-LIVSSRKDSLQHFKKPWAHEHEPV----NNLL 404 (461)
Q Consensus 333 riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs--~G-Li~~~R~~~L~~~k~~fA~~~~~~----~~L~ 404 (461)
||+|.|| |..|..++..|+. .|+ ...++++|. +- .+.....+ +.+.. ++....-.. .++.
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~~~d-l~~~~-~~~~~~~~i~~~~d~l~ 69 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAK-----EPF-----MKDLVLIGREHSINKLEGLRED-IYDAL-AGTRSDANIYVESDENL 69 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----CTT-----CCEEEEEECGGGHHHHHHHHHH-HHHHH-TTSCCCCEEEEEETTCG
T ss_pred EEEEECCCChhHHHHHHHHHh-----CCC-----CCEEEEEcCCCchhhhHHHHHH-HHHhH-HhcCCCeEEEeCCcchH
Confidence 8999999 9999999887753 243 246899996 21 00000000 21111 222100011 1378
Q ss_pred HhhcccCCcEEEeccCCC---CC-----------CCHHHHHHHhcCCCCcEEEEcCCCCchh
Q 012553 405 DAVKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEVVFQALLWLIRKFN 452 (461)
Q Consensus 405 eaV~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIF~Lsnp~~~~ 452 (461)
+++++ +|++|=+.+.+ |. .+++++++|.+++ +.+|+-.|||-+.+
T Consensus 70 ~al~g--aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv~~~ 128 (313)
T 1hye_A 70 RIIDE--SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPVDVM 128 (313)
T ss_dssp GGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSHHHH
T ss_pred HHhCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcHHHH
Confidence 89988 89998666544 21 4678899999999 99999999998876
No 109
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=90.23 E-value=0.16 Score=50.45 Aligned_cols=109 Identities=17% Similarity=0.172 Sum_probs=67.1
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCC--CCHHHhh
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAV 407 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~--~~L~eaV 407 (461)
+..||.|+|||..|.++|..++.. |+ + .+.++|.+-=..++-...|.+.. .+....... .+-.+++
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~-----~~----~--~v~l~Di~~~~~~g~a~dL~~~~-~~~~~~~~v~~t~d~~a~ 71 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIK-----QL----G--DVVLFDIAQGMPNGKALDLLQTC-PIEGVDFKVRGTNDYKDL 71 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-----TC----C--EEEEECSSSSHHHHHHHHHHTTH-HHHTCCCCEEEESCGGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC----c--eEEEEeCChHHHHHHHHHHHhhh-hhcCCCcEEEEcCCHHHH
Confidence 357999999999999999887652 55 2 69999985211000000021111 111111111 1235788
Q ss_pred cccCCcEEEeccCCC---CC-----------CCHHHHHHHhcCCCCcEEEEcCCCCchh
Q 012553 408 KVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEVVFQALLWLIRKFN 452 (461)
Q Consensus 408 ~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIF~Lsnp~~~~ 452 (461)
++ +|++|=+.+.+ |. .-+++++.+.+++..-+|+-.+||-+.+
T Consensus 72 ~~--aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPvd~~ 128 (321)
T 3p7m_A 72 EN--SDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITNPLDIM 128 (321)
T ss_dssp TT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHH
T ss_pred CC--CCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecCchHHH
Confidence 87 89888554443 31 1257778888899888999999998876
No 110
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=90.20 E-value=0.12 Score=50.92 Aligned_cols=104 Identities=15% Similarity=0.152 Sum_probs=65.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcC----CCChhhhhhccccCCCCCHHHhh
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD----SLQHFKKPWAHEHEPVNNLLDAV 407 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~----~L~~~k~~fA~~~~~~~~L~eaV 407 (461)
.||.|+|||+.|..+|-+++.. ++ ...++|+|.+- ++.+ .|.+. .+|.++..-..+-.+++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~----~k~~g~a~dl~~~-~~~~~~~~v~~~~~~a~ 65 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALL-----GV-----AREVVLVDLDR----KLAQAHAEDILHA-TPFAHPVWVWAGSYGDL 65 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSH----HHHHHHHHHHHTT-GGGSCCCEEEECCGGGG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCh----hHHHHHHHHHHHh-HhhcCCeEEEECCHHHh
Confidence 3899999999999988876542 43 35899999852 1110 01111 12221110001236778
Q ss_pred cccCCcEEEeccCCC---CC-----------CCHHHHHHHhcCCCCcEEEEcCCCCchh
Q 012553 408 KVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEVVFQALLWLIRKFN 452 (461)
Q Consensus 408 ~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIF~Lsnp~~~~ 452 (461)
++ +|++|=+.+.+ |. +-+++++.|.+++..-+|+-.|||-..+
T Consensus 66 ~~--aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~ 122 (310)
T 2xxj_A 66 EG--ARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPVDVM 122 (310)
T ss_dssp TT--EEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHH
T ss_pred CC--CCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecCchHHH
Confidence 87 89998554443 32 2356777788889999999999998876
No 111
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=90.12 E-value=3.3 Score=42.36 Aligned_cols=67 Identities=18% Similarity=0.180 Sum_probs=50.6
Q ss_pred cCCCceeccCCC---chhHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHH
Q 012553 297 GTTHLVFNDDIQ---GTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 355 (461)
Q Consensus 297 r~~~~~FnDDiQ---GTaaV~LAgll~Alk~------------------~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~ 355 (461)
+..|+|||---- .+|=-++|.+|+..|- .|..|.+.++.|+|-|..|..+|+.+...
T Consensus 90 ~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~~~~el~gktlGiIGlG~IG~~vA~~l~~~-- 167 (404)
T 1sc6_A 90 KRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEARGKKLGIIGYGHIGTQLGILAESL-- 167 (404)
T ss_dssp HTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCSTTCEEEEECCSHHHHHHHHHHHHT--
T ss_pred hCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccCCCccccCCCEEEEEeECHHHHHHHHHHHHC--
Confidence 356888886543 3444578888888763 25679999999999999999999988642
Q ss_pred HhcCCChhhccceEEEEcCC
Q 012553 356 KQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 356 ~~~Gls~eeA~~~i~lvDs~ 375 (461)
|+ +++.+|+.
T Consensus 168 ---G~-------~V~~~d~~ 177 (404)
T 1sc6_A 168 ---GM-------YVYFYDIE 177 (404)
T ss_dssp ---TC-------EEEEECSS
T ss_pred ---CC-------EEEEEcCC
Confidence 64 68888874
No 112
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=90.09 E-value=2.5 Score=42.59 Aligned_cols=123 Identities=14% Similarity=0.058 Sum_probs=74.9
Q ss_pred CCCceeccCCC---chhHHHHHHHHHHHHH--------------------hCCCcccceEEEeCcchHHHHHHHHHHHHH
Q 012553 298 TTHLVFNDDIQ---GTASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEI 354 (461)
Q Consensus 298 ~~~~~FnDDiQ---GTaaV~LAgll~Alk~--------------------~g~~l~d~riv~~GAGsAgiGiA~ll~~~m 354 (461)
..|+|.|---- .+|=-+++-+|+..|- .+..|.+.+|.|+|.|..|..+|+.+...
T Consensus 108 ~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~IG~~vA~~l~~~- 186 (351)
T 3jtm_A 108 AGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPF- 186 (351)
T ss_dssp TTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGGG-
T ss_pred cCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEEeCHHHHHHHHHHHHC-
Confidence 45666664322 2344567777777752 25679999999999999999999988542
Q ss_pred HHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhcccCCcEEEecc----CCCCCCCHHHH
Q 012553 355 SKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVI 430 (461)
Q Consensus 355 ~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkptvLIG~S----~~~g~Ft~evv 430 (461)
|+ +++.+|+... .....+.. ......+|.|+++. .|+++=.- ...+.|+++.+
T Consensus 187 ----G~-------~V~~~dr~~~-------~~~~~~~~---g~~~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l 243 (351)
T 3jtm_A 187 ----GC-------NLLYHDRLQM-------APELEKET---GAKFVEDLNEMLPK--CDVIVINMPLTEKTRGMFNKELI 243 (351)
T ss_dssp ----CC-------EEEEECSSCC-------CHHHHHHH---CCEECSCHHHHGGG--CSEEEECSCCCTTTTTCBSHHHH
T ss_pred ----CC-------EEEEeCCCcc-------CHHHHHhC---CCeEcCCHHHHHhc--CCEEEECCCCCHHHHHhhcHHHH
Confidence 64 5888887431 01001100 00112467787776 77776321 22347778887
Q ss_pred HHHhcCCCCcEEEEcCC
Q 012553 431 EAMASFNEVVFQALLWL 447 (461)
Q Consensus 431 ~~Ma~~~erPIIF~Lsn 447 (461)
+.|.+ ..+|.=.|.
T Consensus 244 ~~mk~---gailIN~aR 257 (351)
T 3jtm_A 244 GKLKK---GVLIVNNAR 257 (351)
T ss_dssp HHSCT---TEEEEECSC
T ss_pred hcCCC---CCEEEECcC
Confidence 77764 455555444
No 113
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=90.08 E-value=0.21 Score=49.53 Aligned_cols=109 Identities=17% Similarity=0.151 Sum_probs=67.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCC--CCHHHhhcc
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAVKV 409 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~--~~L~eaV~~ 409 (461)
.||.|+|||..|.++|..++.. |+ ...+.++|..-=..++-...|.+. ..+....... .+..+++++
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~~v~~~~~~~a~~~ 69 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQ-----DV-----AKEVVMVDIKDGMPQGKALDMRES-SPIHGFDTRVTGTNDYGPTED 69 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----SSEEEEECSSTTHHHHHHHHHHHH-HHHHTCCCEEEEESSSGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCchHHHHHHHHHHhcc-ccccCCCcEEEECCCHHHhCC
Confidence 3799999999999999988764 54 258999998531111000002111 1111111111 245678887
Q ss_pred cCCcEEEeccCCC---CC-----------CCHHHHHHHhcCCCCcEEEEcCCCCchhh
Q 012553 410 IKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEVVFQALLWLIRKFNF 453 (461)
Q Consensus 410 vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIF~Lsnp~~~~~ 453 (461)
+|++|=+.+.+ |- +-+++++.+++++...+|+-.+||-+.+-
T Consensus 70 --aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPvd~~t 125 (314)
T 3nep_X 70 --SDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANPLDVMT 125 (314)
T ss_dssp --CSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSSHHHHH
T ss_pred --CCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCchhHHH
Confidence 89887444433 21 23567788889999999999999988764
No 114
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=90.02 E-value=0.97 Score=44.06 Aligned_cols=100 Identities=17% Similarity=0.169 Sum_probs=58.5
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcc
Q 012553 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (461)
Q Consensus 316 Agll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~ 395 (461)
.|++.+++-.| +.+++|+|||.||.+++..|... | .+|+++++. .+|.+.+. .+.-
T Consensus 107 ~Gf~~~L~~~~----~k~vlvlGaGGaaraia~~L~~~-----G-------~~v~V~nRt----~~ka~~la----~~~~ 162 (269)
T 3phh_A 107 LGFYLSLKQKN----YQNALILGAGGSAKALACELKKQ-----G-------LQVSVLNRS----SRGLDFFQ----RLGC 162 (269)
T ss_dssp HHHHHHCC-------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS----CTTHHHHH----HHTC
T ss_pred HHHHHHHHHcC----CCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCC----HHHHHHHH----HCCC
Confidence 45666665433 78999999999999999888653 3 478888874 22211121 1111
Q ss_pred ccCCCCCHHHhhcccCCcEEEeccCCC----CCCCHHHHH-HHhcCCCCcEEEEc-CCC
Q 012553 396 EHEPVNNLLDAVKVIKPTILIGSSGVG----RTFTKEVIE-AMASFNEVVFQALL-WLI 448 (461)
Q Consensus 396 ~~~~~~~L~eaV~~vkptvLIG~S~~~----g~Ft~evv~-~Ma~~~erPIIF~L-snp 448 (461)
......+| . ++|++|-++..+ -.+.++.+. .+.+ ..+++=+ .||
T Consensus 163 ~~~~~~~l----~--~~DiVInaTp~Gm~~~~~l~~~~l~~~l~~---~~~v~D~vY~P 212 (269)
T 3phh_A 163 DCFMEPPK----S--AFDLIINATSASLHNELPLNKEVLKGYFKE---GKLAYDLAYGF 212 (269)
T ss_dssp EEESSCCS----S--CCSEEEECCTTCCCCSCSSCHHHHHHHHHH---CSEEEESCCSS
T ss_pred eEecHHHh----c--cCCEEEEcccCCCCCCCCCChHHHHhhCCC---CCEEEEeCCCC
Confidence 11111222 2 599999766544 147888665 4543 5676654 465
No 115
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=89.99 E-value=0.22 Score=49.72 Aligned_cols=110 Identities=15% Similarity=0.208 Sum_probs=67.4
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCC---CCHHH
Q 012553 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV---NNLLD 405 (461)
Q Consensus 329 l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~---~~L~e 405 (461)
++..||.|+|||..|.++|..++.. |+ + .+.++|.+-=..++-...|.+. ..|....... .+. +
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~-----~~----~--~v~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~t~d~-~ 71 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLK-----EL----G--DVVLFDIAEGTPQGKGLDIAES-SPVDGFDAKFTGANDY-A 71 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHT-----TC----C--EEEEECSSSSHHHHHHHHHHHH-HHHHTCCCCEEEESSG-G
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhC-----CC----C--eEEEEeCCchhHHHHHHHHhch-hhhcCCCCEEEEeCCH-H
Confidence 4567999999999999999887653 65 2 6999997421110000012111 1122111111 344 7
Q ss_pred hhcccCCcEEEeccCCC---CC-----C------CHHHHHHHhcCCCCcEEEEcCCCCchhh
Q 012553 406 AVKVIKPTILIGSSGVG---RT-----F------TKEVIEAMASFNEVVFQALLWLIRKFNF 453 (461)
Q Consensus 406 aV~~vkptvLIG~S~~~---g~-----F------t~evv~~Ma~~~erPIIF~Lsnp~~~~~ 453 (461)
++++ +|++|=+.+.+ |. | -+++++.|.+++..-+|+-.+||-+.+-
T Consensus 72 a~~~--aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNPvd~~t 131 (324)
T 3gvi_A 72 AIEG--ADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPLDAMV 131 (324)
T ss_dssp GGTT--CSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHH
T ss_pred HHCC--CCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCCcHHHH
Confidence 8887 89887554433 32 1 2567788888998899999999988653
No 116
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=89.99 E-value=0.35 Score=47.75 Aligned_cols=107 Identities=19% Similarity=0.190 Sum_probs=66.9
Q ss_pred ceEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhh-ccccCCCCCHHHhhcc
Q 012553 332 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPW-AHEHEPVNNLLDAVKV 409 (461)
Q Consensus 332 ~riv~~G-AGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~f-A~~~~~~~~L~eaV~~ 409 (461)
.||+|.| +|..|..++..|+. .|+ ...++++|.+.- .+....|.+...+. .+......++.+++++
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~-----~g~-----~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~~~~t~d~~~al~g 76 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKM-----NPL-----VSVLHLYDVVNA--PGVTADISHMDTGAVVRGFLGQQQLEAALTG 76 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHH-----CTT-----EEEEEEEESSSH--HHHHHHHHTSCSSCEEEEEESHHHHHHHHTT
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEeCCCc--HhHHHHhhcccccceEEEEeCCCCHHHHcCC
Confidence 5899999 79999999887653 243 256999996421 00000011100000 0000011257889988
Q ss_pred cCCcEEEeccCCCC--------------CCCHHHHHHHhcCCCCcEEEEcCCCCchh
Q 012553 410 IKPTILIGSSGVGR--------------TFTKEVIEAMASFNEVVFQALLWLIRKFN 452 (461)
Q Consensus 410 vkptvLIG~S~~~g--------------~Ft~evv~~Ma~~~erPIIF~Lsnp~~~~ 452 (461)
+|++|=+.+.+. ..++++++.|.+++.+.+|+--|||-..+
T Consensus 77 --aDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SNPv~~~ 131 (326)
T 1smk_A 77 --MDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPVNST 131 (326)
T ss_dssp --CSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHH
T ss_pred --CCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCchHHH
Confidence 899986554442 24678888888888888999999998873
No 117
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=89.86 E-value=2 Score=45.71 Aligned_cols=177 Identities=17% Similarity=0.186 Sum_probs=111.8
Q ss_pred CChhhhHHHHHHHHHHHHH--hcCCCeeeeeecCCcccH--HHHHHHHcC---CC------ceeccCC---------Cch
Q 012553 253 ATGQEYAELLDEFMSAVKQ--NYGEKVLIQFEDFANHNA--FELLAKYGT---TH------LVFNDDI---------QGT 310 (461)
Q Consensus 253 ~~g~~Y~~~idefv~av~~--~fGp~~lIq~EDf~~~~a--f~iL~ryr~---~~------~~FnDDi---------QGT 310 (461)
.+..|-..|.-.||+.+.+ ..||..-|-=+|++..-. --+.+.|+. .. ++-..-+ .-|
T Consensus 136 ~s~~El~r~~r~f~~eL~~~~~IGp~~dipApDvGt~~~eM~wm~d~y~~~~g~~~~~~~g~vTGKp~~~GGs~~r~eAT 215 (501)
T 3mw9_A 136 YTDNELEKITRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISAT 215 (501)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTSCBTTTEECCBCTTCCHHHHHHHHHHHHHTTTTTCTTGGGSCSSCCGGGTCCTTTTTHH
T ss_pred CCHHHHHHHHHHHHHHHhhccCCCCCeeEecCCCCCCHHHHHHHHHHHHHHhCCCcccCCceeeCCcccccCCCCCCCch
Confidence 3556778889999999985 778888888899986422 236677742 11 1111111 224
Q ss_pred hHHHHHHHHH------HHHHhCC--CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCC
Q 012553 311 ASVVLAGVVA------ALKLIGG--TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSR 382 (461)
Q Consensus 311 aaV~LAgll~------Alk~~g~--~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R 382 (461)
|-=+.-++-+ +++..|. .|++.||+|-|.|..|...|+.|.+. |. +=+-+.|++|-|++..
T Consensus 216 g~GV~~~~~~~l~~~~~~~~~G~~~~l~g~tVaVQG~GNVG~~aa~~L~e~-----Ga------kVVavsDs~G~iyd~~ 284 (501)
T 3mw9_A 216 GRGVFHGIENFINEASYMSILGMTPGFGDKTFVVQGFGNVGLHSMRYLHRF-----GA------KCITVGESDGSIWNPD 284 (501)
T ss_dssp HHHHHHHHHHHHTCHHHHHHTTCCSSSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEECSSCEEECTT
T ss_pred HHHHHHHHHHHHhhhHHHHHcCCCCCcCCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEcCCceEECCC
Confidence 4444444443 3445675 48999999999999999999998753 52 4455899999999764
Q ss_pred cCCCChhhh-hhccccCCC------CCHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcCC
Q 012553 383 KDSLQHFKK-PWAHEHEPV------NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLWL 447 (461)
Q Consensus 383 ~~~L~~~k~-~fA~~~~~~------~~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Lsn 447 (461)
.++..+. .+....... ..+.+.+-.++.||||=+..+ +.+|++-++.+. -+||.--||
T Consensus 285 --Gid~~~l~~~k~~~g~i~~~~~a~~~~~~il~~~~DIliPcA~~-n~I~~~na~~l~----akiV~EgAN 349 (501)
T 3mw9_A 285 --GIDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCDILIPAASE-KQLTKSNAPRVK----AKIIAEGAN 349 (501)
T ss_dssp --CCCHHHHHHHHHHHSSSTTCTTSEEECSCGGGSCCSEEEECSSS-CCBCTTTGGGCC----CSEEECCSS
T ss_pred --CCCHHHHHHHHHhcCCeecccCceeeccccccccceEEeecccc-CccCHhHHHHcC----ceEEEeCCC
Confidence 3543221 111111000 001113445678999987775 588888777663 567776666
No 118
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=89.63 E-value=0.3 Score=50.72 Aligned_cols=99 Identities=14% Similarity=0.140 Sum_probs=63.8
Q ss_pred HHHHHHHHHHhcCCCeeeeeecCCcccHHHHHHHHc-CCCcee--ccCCCchhHHHHHHHHHHHHHhCC--------Ccc
Q 012553 262 LDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYG-TTHLVF--NDDIQGTASVVLAGVVAALKLIGG--------TLA 330 (461)
Q Consensus 262 idefv~av~~~fGp~~lIq~EDf~~~~af~iL~ryr-~~~~~F--nDDiQGTaaV~LAgll~Alk~~g~--------~l~ 330 (461)
+..+++.+...+ ++ |.++-+......++-++|. ..+|++ |+..-+.+.....-++..+..... .-.
T Consensus 135 ~~~~l~~~a~~~-~~--v~~~~vd~~~~~~~~~~~~i~svPt~~i~g~~~~~G~~~~~~l~~~l~~~~~~~~~~~~~~~~ 211 (521)
T 1hyu_A 135 VVQALNLMAVLN-PR--IKHTAIDGGTFQNEITERNVMGVPAVFVNGKEFGQGRMTLTEIVAKVDTGAEKRAAEALNKRD 211 (521)
T ss_dssp HHHHHHHHHHHC-TT--EEEEEEETTTCHHHHHHTTCCSSSEEEETTEEEEESCCCHHHHHHHHCCSSCCHHHHHHHTSC
T ss_pred HHHHHHHHHhHc-Cc--eEEEEEechhhHHHHHHhCCCccCEEEECCEEEecCCCCHHHHHHHHhhcccccccccccccC
Confidence 555666666677 43 5555444445567888996 467754 665666676666667766533210 112
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
..+|+|+|||.||+..|..+.. .|+ ++.++|.+
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~-----~G~-------~v~lie~~ 244 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSAR-----KGI-------RTGLMGER 244 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cccEEEECCcHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 4579999999999999988764 253 56677653
No 119
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=89.56 E-value=0.22 Score=51.83 Aligned_cols=110 Identities=12% Similarity=0.080 Sum_probs=68.4
Q ss_pred ceEEEeCcchH-HHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcc--c-cCC---CCCHH
Q 012553 332 HRFLFLGAGEA-GTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH--E-HEP---VNNLL 404 (461)
Q Consensus 332 ~riv~~GAGsA-giGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~--~-~~~---~~~L~ 404 (461)
.||.|+|||+. |.+++..|+.. ..++. ...++|+|.+-- +++.+.+......+.. . ... ..++.
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~---~~~l~----~~ev~L~Di~~~--~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~ 78 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKR---YHELP----VGELWLVDIPEG--KEKLEIVGALAKRMVEKAGVPIEIHLTLDRR 78 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHT---TTTCC----EEEEEEECCGGG--HHHHHHHHHHHHHHHHHTTCCCEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCCCC----CCEEEEEEcCCC--hHHHHHHHHHHHHHHhhcCCCcEEEEeCCHH
Confidence 69999999997 55555555431 12442 357999998530 0111111111122211 1 111 25788
Q ss_pred HhhcccCCcEEEeccCCCCC----------------------------------CCHHHHHHHhcCCCCcEEEEcCCCCc
Q 012553 405 DAVKVIKPTILIGSSGVGRT----------------------------------FTKEVIEAMASFNEVVFQALLWLIRK 450 (461)
Q Consensus 405 eaV~~vkptvLIG~S~~~g~----------------------------------Ft~evv~~Ma~~~erPIIF~Lsnp~~ 450 (461)
+++++ +|++|=..+.++. .-.++++.|.+++..-+|+-.|||-.
T Consensus 79 eal~g--AD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPvd 156 (450)
T 1s6y_A 79 RALDG--ADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAG 156 (450)
T ss_dssp HHHTT--CSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH
T ss_pred HHhCC--CCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHH
Confidence 99998 9999866665421 23588999999999999999999976
Q ss_pred hh
Q 012553 451 FN 452 (461)
Q Consensus 451 ~~ 452 (461)
.+
T Consensus 157 iv 158 (450)
T 1s6y_A 157 MV 158 (450)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 120
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=89.53 E-value=0.8 Score=44.41 Aligned_cols=107 Identities=14% Similarity=0.148 Sum_probs=61.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhh-----hhccc---cCC---
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-----PWAHE---HEP--- 399 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~-----~fA~~---~~~--- 399 (461)
..||.|+|+|..|.++|..+... |........+++++|+..-.. .+. .....++ .|-.. ...
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~-----g~~~~~~~~~V~~~~r~~~~~-~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~ 80 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGN-----AAQLAQFDPRVTMWVFEEDIG-GKK-LTEIINTQHENVKYLPGHKLPPNVVA 80 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-----HHHCTTEEEEEEEECCCCBSS-SSB-HHHHHHHHSCCTTTSTTCCCCTTEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhc-----CCcccCCCCeEEEEEcChhhh-hhH-HHHHHHhcCcccccCCcccCccCeEE
Confidence 36899999999999999998764 210000014688888753211 000 0111110 01000 001
Q ss_pred CCCHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCC-CCcEEEEcCCC
Q 012553 400 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EVVFQALLWLI 448 (461)
Q Consensus 400 ~~~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIF~Lsnp 448 (461)
..++.++++. +|++| ++... ...+++++.++++. +..+|..++|.
T Consensus 81 ~~~~~~~~~~--aD~Vi-lav~~-~~~~~v~~~i~~~l~~~~ivv~~~~G 126 (354)
T 1x0v_A 81 VPDVVQAAED--ADILI-FVVPH-QFIGKICDQLKGHLKANATGISLIKG 126 (354)
T ss_dssp ESSHHHHHTT--CSEEE-ECCCG-GGHHHHHHHHTTCSCTTCEEEECCCC
T ss_pred EcCHHHHHcC--CCEEE-EeCCH-HHHHHHHHHHHhhCCCCCEEEEECCc
Confidence 1468888876 88777 33333 47788999887654 46688888883
No 121
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=89.52 E-value=0.26 Score=45.36 Aligned_cols=21 Identities=29% Similarity=0.597 Sum_probs=19.1
Q ss_pred ceEEEeCcchHHHHHHHHHHH
Q 012553 332 HRFLFLGAGEAGTGIAELIAL 352 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~ 352 (461)
.||.|+|+|..|.++|..+..
T Consensus 24 mkI~IIG~G~mG~~la~~l~~ 44 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTA 44 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHh
Confidence 589999999999999998865
No 122
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=89.48 E-value=3.2 Score=40.74 Aligned_cols=66 Identities=18% Similarity=0.132 Sum_probs=46.6
Q ss_pred CCCceeccCCCc---hhHHHHHHHHHHHHH---------------------hCCCcccceEEEeCcchHHHHHHHHHHHH
Q 012553 298 TTHLVFNDDIQG---TASVVLAGVVAALKL---------------------IGGTLAEHRFLFLGAGEAGTGIAELIALE 353 (461)
Q Consensus 298 ~~~~~FnDDiQG---TaaV~LAgll~Alk~---------------------~g~~l~d~riv~~GAGsAgiGiA~ll~~~ 353 (461)
..|+|.|----. +|=-+++.+|+..|- .+..+.+.+|.|+|.|..|..+|+.+...
T Consensus 87 ~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~ 166 (311)
T 2cuk_A 87 RGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVAKRALAF 166 (311)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHHT
T ss_pred CCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHHHHHHHHC
Confidence 456666643322 344467777777652 14578899999999999999999988642
Q ss_pred HHHhcCCChhhccceEEEEcCC
Q 012553 354 ISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 354 m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
|+ +++.+|+.
T Consensus 167 -----G~-------~V~~~d~~ 176 (311)
T 2cuk_A 167 -----GM-------RVVYHART 176 (311)
T ss_dssp -----TC-------EEEEECSS
T ss_pred -----CC-------EEEEECCC
Confidence 53 68888874
No 123
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=89.46 E-value=0.4 Score=49.41 Aligned_cols=107 Identities=10% Similarity=0.078 Sum_probs=67.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHH-hcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccC---CCCCHHHhh
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISK-QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHE---PVNNLLDAV 407 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~-~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~---~~~~L~eaV 407 (461)
.||.|+|||+. .+..++..+.. ..++ ....|+|+|.+- +|.+.........++... ...++.+++
T Consensus 3 ~KI~IIGaG~v---~~~~l~~~l~~~~~~l----~~~el~L~Di~~----~~~~~~~~~~~~~~~~~~~v~~t~d~~~al 71 (417)
T 1up7_A 3 MRIAVIGGGSS---YTPELVKGLLDISEDV----RIDEVIFYDIDE----EKQKIVVDFVKRLVKDRFKVLISDTFEGAV 71 (417)
T ss_dssp CEEEEETTTCT---THHHHHHHHHHHTTTS----CCCEEEEECSCH----HHHHHHHHHHHHHHTTSSEEEECSSHHHHH
T ss_pred CEEEEECCCHH---HHHHHHHHHHhcccCC----CcCEEEEEeCCH----HHHHHHHHHHHHHhhCCeEEEEeCCHHHHh
Confidence 58999999995 55555444433 2344 246899999743 221100111111111111 125788999
Q ss_pred cccCCcEEEeccCCCC---------------CC-------------------CHHHHHHHhcCCCCcEEEEcCCCCchh
Q 012553 408 KVIKPTILIGSSGVGR---------------TF-------------------TKEVIEAMASFNEVVFQALLWLIRKFN 452 (461)
Q Consensus 408 ~~vkptvLIG~S~~~g---------------~F-------------------t~evv~~Ma~~~erPIIF~Lsnp~~~~ 452 (461)
++ +|++|=..++++ ++ =.++++.|.+++ .-+|+-.|||-..+
T Consensus 72 ~~--AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~-~A~lin~TNPvdi~ 147 (417)
T 1up7_A 72 VD--AKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS-NATIVNFTNPSGHI 147 (417)
T ss_dssp TT--CSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT-CCEEEECSSSHHHH
T ss_pred CC--CCEEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC-CEEEEEeCChHHHH
Confidence 98 999997776653 22 358999999999 99999999997643
No 124
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=89.46 E-value=0.58 Score=44.74 Aligned_cols=100 Identities=10% Similarity=0.050 Sum_probs=56.8
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcC--CCc-cccCCcCCCCh-hhhhhccccCCCC--CHHHh
Q 012553 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS--KGL-IVSSRKDSLQH-FKKPWAHEHEPVN--NLLDA 406 (461)
Q Consensus 333 riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs--~GL-i~~~R~~~L~~-~k~~fA~~~~~~~--~L~ea 406 (461)
||.|+|+|..|..+|..+... | .+++++|+ +.- +..-+...... +...+ ....... ++.|+
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~-----g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~ 68 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN-----G-------NEVRIWGTEFDTEILKSISAGREHPRLGVKL-NGVEIFWPEQLEKC 68 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH-----C-------CEEEEECCGGGHHHHHHHHTTCCBTTTTBCC-CSEEEECGGGHHHH
T ss_pred EEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEEccCCHHHHHHHHHhCcCcccCccc-cceEEecHHhHHHH
Confidence 799999999999999988754 4 36888887 321 00000000000 00000 0000112 57777
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcCCCC
Q 012553 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLWLIR 449 (461)
Q Consensus 407 V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Lsnp~ 449 (461)
++. +|++|=+ ... ...+++++.+++..+..+|..++|..
T Consensus 69 ~~~--~D~vi~~-v~~-~~~~~v~~~i~~l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 69 LEN--AEVVLLG-VST-DGVLPVMSRILPYLKDQYIVLISKGL 107 (335)
T ss_dssp HTT--CSEEEEC-SCG-GGHHHHHHHHTTTCCSCEEEECCCSE
T ss_pred Hhc--CCEEEEc-CCh-HHHHHHHHHHhcCCCCCEEEEEcCcC
Confidence 775 7877733 323 36788888887633356777888754
No 125
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=89.46 E-value=3.9 Score=42.33 Aligned_cols=67 Identities=15% Similarity=0.237 Sum_probs=50.8
Q ss_pred cCCCceeccCCC---chhHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHH
Q 012553 297 GTTHLVFNDDIQ---GTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 355 (461)
Q Consensus 297 r~~~~~FnDDiQ---GTaaV~LAgll~Alk~------------------~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~ 355 (461)
+..|+|||---- .+|=-++|.+|+..|- .+..|.+.++.|+|.|..|..+|+.+...
T Consensus 101 ~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el~gktvGIIGlG~IG~~vA~~l~~~-- 178 (416)
T 3k5p_A 101 KRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVRGKTLGIVGYGNIGSQVGNLAESL-- 178 (416)
T ss_dssp HTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCSTTCEEEEECCSHHHHHHHHHHHHT--
T ss_pred hcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCCCCccCCCCEEEEEeeCHHHHHHHHHHHHC--
Confidence 457889987533 3455578888887753 24678999999999999999999987543
Q ss_pred HhcCCChhhccceEEEEcCC
Q 012553 356 KQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 356 ~~~Gls~eeA~~~i~lvDs~ 375 (461)
|+ +++.+|+.
T Consensus 179 ---G~-------~V~~yd~~ 188 (416)
T 3k5p_A 179 ---GM-------TVRYYDTS 188 (416)
T ss_dssp ---TC-------EEEEECTT
T ss_pred ---CC-------EEEEECCc
Confidence 65 78888975
No 126
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=89.42 E-value=0.67 Score=48.33 Aligned_cols=101 Identities=9% Similarity=0.055 Sum_probs=64.1
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcc-ccCCCCCHHHhh
Q 012553 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAV 407 (461)
Q Consensus 329 l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV 407 (461)
++..+|.|+|+|..|.++|..|... |. +++++|+. . +..+...+.+.. ......++.|++
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~~r~----~---~~~~~l~~~~~~~gi~~~~s~~e~v 73 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESR-----GY-------TVSIFNRS----R---EKTEEVIAENPGKKLVPYYTVKEFV 73 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTT-----TC-------CEEEECSS----H---HHHHHHHHHSTTSCEEECSSHHHHH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhC-----CC-------eEEEEeCC----H---HHHHHHHhhCCCCCeEEeCCHHHHH
Confidence 4567899999999999999988653 53 57777763 1 111111111100 011235788988
Q ss_pred ccc-CCcEEEeccCCCCCCCHHHHHHHhcCC-CCcEEEEcCCCC
Q 012553 408 KVI-KPTILIGSSGVGRTFTKEVIEAMASFN-EVVFQALLWLIR 449 (461)
Q Consensus 408 ~~v-kptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIF~Lsnp~ 449 (461)
+.. +||++| ++.+.+..++++++.+.+.- +..||.-++|..
T Consensus 74 ~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~ 116 (480)
T 2zyd_A 74 ESLETPRRIL-LMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTF 116 (480)
T ss_dssp HTBCSSCEEE-ECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred hCCCCCCEEE-EECCCHHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 753 488877 55545567889998887654 356888898875
No 127
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=89.31 E-value=3.9 Score=40.07 Aligned_cols=67 Identities=22% Similarity=0.232 Sum_probs=47.3
Q ss_pred CCCceecc-CCCc--hhHHHHHHHHHHHHHh-----------------CCCcccceEEEeCcchHHHHHHHHHHHHHHHh
Q 012553 298 TTHLVFND-DIQG--TASVVLAGVVAALKLI-----------------GGTLAEHRFLFLGAGEAGTGIAELIALEISKQ 357 (461)
Q Consensus 298 ~~~~~FnD-DiQG--TaaV~LAgll~Alk~~-----------------g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~ 357 (461)
..+++.|- +... +|=-+++.+|+..|-. +..|.+.++.|+|.|..|..+|+.+...
T Consensus 71 ~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~---- 146 (303)
T 1qp8_A 71 PHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDVEIPLIQGEKVAVLGLGEIGTRVGKILAAL---- 146 (303)
T ss_dssp TTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCSCCCCCTTCEEEEESCSTHHHHHHHHHHHT----
T ss_pred cCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCCEEEEEccCHHHHHHHHHHHHC----
Confidence 46777774 3332 2334788888876531 2368899999999999999999988642
Q ss_pred cCCChhhccceEEEEcCCC
Q 012553 358 TKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 358 ~Gls~eeA~~~i~lvDs~G 376 (461)
|+ +++.+|+..
T Consensus 147 -G~-------~V~~~dr~~ 157 (303)
T 1qp8_A 147 -GA-------QVRGFSRTP 157 (303)
T ss_dssp -TC-------EEEEECSSC
T ss_pred -CC-------EEEEECCCc
Confidence 54 688888754
No 128
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=89.29 E-value=0.36 Score=46.94 Aligned_cols=33 Identities=33% Similarity=0.536 Sum_probs=27.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
..||.|+|+|+.|.++|..|..+ | .+++++|+.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~-----G-------~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHEN-----G-------EEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCC
Confidence 57999999999999999998753 4 368888874
No 129
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=89.15 E-value=0.43 Score=47.13 Aligned_cols=39 Identities=21% Similarity=0.292 Sum_probs=34.4
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 327 ~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
++|++.||+|+|||..|..+|+.|+.+ |+ .+|.++|.+=
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La~a-----GV------G~i~lvD~D~ 70 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLTRC-----GI------GKLLLFDYDK 70 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCCB
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHHHc-----CC------CEEEEECCCc
Confidence 578999999999999999999999876 64 6999999863
No 130
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=89.12 E-value=0.13 Score=49.32 Aligned_cols=32 Identities=25% Similarity=0.272 Sum_probs=26.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.||.|+|+|..|.+||..+..+ |. +++++|+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~-----G~-------~V~l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH-----GF-------AVTAYDIN 36 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCC
Confidence 5899999999999999988753 53 68888874
No 131
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=89.07 E-value=1.8 Score=43.52 Aligned_cols=86 Identities=13% Similarity=0.177 Sum_probs=54.8
Q ss_pred eeeecCCcccH-HHHHHHHcCCCceeccCC---CchhHHHHHHHHHHHHH--------------------hCCCcccceE
Q 012553 279 IQFEDFANHNA-FELLAKYGTTHLVFNDDI---QGTASVVLAGVVAALKL--------------------IGGTLAEHRF 334 (461)
Q Consensus 279 Iq~EDf~~~~a-f~iL~ryr~~~~~FnDDi---QGTaaV~LAgll~Alk~--------------------~g~~l~d~ri 334 (461)
|+.-..+..|- .+...+.+..|.|.|--- ..+|=-+++.+|+..|- .+..|.+.+|
T Consensus 88 I~~~~~G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~g~tv 167 (364)
T 2j6i_A 88 VVVAGVGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKTI 167 (364)
T ss_dssp EEESSSCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEE
T ss_pred EEECCcccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCcccCCCCEE
Confidence 55555554442 122222222566666432 23444468888877662 3668999999
Q ss_pred EEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 335 LFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 335 v~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.|+|.|..|..+|+.+.. .|+ ++++.+|+.
T Consensus 168 gIIG~G~IG~~vA~~l~~-----~G~------~~V~~~d~~ 197 (364)
T 2j6i_A 168 ATIGAGRIGYRVLERLVP-----FNP------KELLYYDYQ 197 (364)
T ss_dssp EEECCSHHHHHHHHHHGG-----GCC------SEEEEECSS
T ss_pred EEECcCHHHHHHHHHHHh-----CCC------cEEEEECCC
Confidence 999999999999998753 253 238888864
No 132
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=88.98 E-value=1.4 Score=44.81 Aligned_cols=100 Identities=16% Similarity=0.151 Sum_probs=58.3
Q ss_pred hhHHHHHHHHHHHHH---------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccce
Q 012553 310 TASVVLAGVVAALKL---------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKK 368 (461)
Q Consensus 310 TaaV~LAgll~Alk~---------------------~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~ 368 (461)
+|=-+++-+|+..|- .+..|.+.++.|+|.|..|-.+|+.+.. .|+ +
T Consensus 134 vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~~-----fG~-------~ 201 (365)
T 4hy3_A 134 VAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEIGIVGFGDLGKALRRVLSG-----FRA-------R 201 (365)
T ss_dssp HHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEEEEECCSHHHHHHHHHHTT-----SCC-------E
T ss_pred HHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEEEEecCCcccHHHHHhhhh-----CCC-------E
Confidence 444567777766652 2346889999999999999999998743 254 6
Q ss_pred EEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhcccCCcEEEec----cCCCCCCCHHHHHHHhc
Q 012553 369 ICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGS----SGVGRTFTKEVIEAMAS 435 (461)
Q Consensus 369 i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkptvLIG~----S~~~g~Ft~evv~~Ma~ 435 (461)
++.+|+.. .. ......-+ ...+|.|+++. .|+++=. ....+.++++.++.|.+
T Consensus 202 V~~~d~~~--~~------~~~~~~g~----~~~~l~ell~~--aDvV~l~~Plt~~T~~li~~~~l~~mk~ 258 (365)
T 4hy3_A 202 IRVFDPWL--PR------SMLEENGV----EPASLEDVLTK--SDFIFVVAAVTSENKRFLGAEAFSSMRR 258 (365)
T ss_dssp EEEECSSS--CH------HHHHHTTC----EECCHHHHHHS--CSEEEECSCSSCC---CCCHHHHHTSCT
T ss_pred EEEECCCC--CH------HHHhhcCe----eeCCHHHHHhc--CCEEEEcCcCCHHHHhhcCHHHHhcCCC
Confidence 88888641 00 00000000 12356666665 6666622 12234666666666654
No 133
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=88.97 E-value=2.9 Score=41.45 Aligned_cols=37 Identities=22% Similarity=0.267 Sum_probs=30.8
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 327 ~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
..|.+.+|.|+|.|..|..+|+.+.. .|. +++.+|+.
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~-----~G~-------~V~~~d~~ 178 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIP-----FGV-------KLYYWSRH 178 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGG-----GTC-------EEEEECSS
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEECCC
Confidence 67999999999999999999998753 253 68888874
No 134
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=88.90 E-value=4.9 Score=39.77 Aligned_cols=121 Identities=16% Similarity=0.065 Sum_probs=72.0
Q ss_pred cCCCceeccCCCch---hHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHH
Q 012553 297 GTTHLVFNDDIQGT---ASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 355 (461)
Q Consensus 297 r~~~~~FnDDiQGT---aaV~LAgll~Alk~------------------~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~ 355 (461)
+..|+|.|----.+ |=-+++.+|+..|- .+..+.+.+|.|+|.|..|..+|+.+...
T Consensus 91 ~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~-- 168 (333)
T 1j4a_A 91 ELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQVFMQIMEGF-- 168 (333)
T ss_dssp HTTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBCCGGGSEEEEECCSHHHHHHHHHHHHT--
T ss_pred hCCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCCcccccCCCCEEEEEccCHHHHHHHHHHHHC--
Confidence 35677777543333 34478888887762 23568899999999999999999988642
Q ss_pred HhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhcccCCcEEEeccC----CCCCCCHHHHH
Q 012553 356 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIE 431 (461)
Q Consensus 356 ~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkptvLIG~S~----~~g~Ft~evv~ 431 (461)
|+ +++.+|+..- . . .+ .++. ...+|.|+++. .|+++=.-. ..++++++.++
T Consensus 169 ---G~-------~V~~~d~~~~------~-~--~~-~~~~---~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~ 223 (333)
T 1j4a_A 169 ---GA-------KVITYDIFRN------P-E--LE-KKGY---YVDSLDDLYKQ--ADVISLHVPDVPANVHMINDESIA 223 (333)
T ss_dssp ---TC-------EEEEECSSCC------H-H--HH-HTTC---BCSCHHHHHHH--CSEEEECSCCCGGGTTCBSHHHHH
T ss_pred ---CC-------EEEEECCCcc------h-h--HH-hhCe---ecCCHHHHHhh--CCEEEEcCCCcHHHHHHHhHHHHh
Confidence 64 6888887421 0 0 11 1111 11256666665 666663321 12456666666
Q ss_pred HHhcCCCCcEEEEcCC
Q 012553 432 AMASFNEVVFQALLWL 447 (461)
Q Consensus 432 ~Ma~~~erPIIF~Lsn 447 (461)
.|.+ ..++.-.|-
T Consensus 224 ~mk~---ga~lIn~ar 236 (333)
T 1j4a_A 224 KMKQ---DVVIVNVSR 236 (333)
T ss_dssp HSCT---TEEEEECSC
T ss_pred hCCC---CcEEEECCC
Confidence 6643 345444443
No 135
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=88.86 E-value=4.5 Score=40.57 Aligned_cols=118 Identities=14% Similarity=0.172 Sum_probs=74.4
Q ss_pred CCCceeccCCCc---hhHHHHHHHHHHHHH----------h----------CCCcccceEEEeCcchHHHHHHHHHHHHH
Q 012553 298 TTHLVFNDDIQG---TASVVLAGVVAALKL----------I----------GGTLAEHRFLFLGAGEAGTGIAELIALEI 354 (461)
Q Consensus 298 ~~~~~FnDDiQG---TaaV~LAgll~Alk~----------~----------g~~l~d~riv~~GAGsAgiGiA~ll~~~m 354 (461)
..|+|.|----. +|=-+++-+|+..|- . +..|.+.+|.|+|.|..|..+|+.+...
T Consensus 92 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~IG~~vA~~l~~~- 170 (343)
T 2yq5_A 92 YNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHIGSAVAEIFSAM- 170 (343)
T ss_dssp --CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT-
T ss_pred CCEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEecCHHHHHHHHHHhhC-
Confidence 367777764333 444568888877651 2 3468899999999999999999988642
Q ss_pred HHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhcccCCcEEEecc----CCCCCCCHHHH
Q 012553 355 SKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVI 430 (461)
Q Consensus 355 ~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkptvLIG~S----~~~g~Ft~evv 430 (461)
|+ +++.+|+..- .... ..+. ..+|.|+++. .|+++=.- ...+.|+++.+
T Consensus 171 ----G~-------~V~~~d~~~~------~~~~----~~~~----~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l 223 (343)
T 2yq5_A 171 ----GA-------KVIAYDVAYN------PEFE----PFLT----YTDFDTVLKE--ADIVSLHTPLFPSTENMIGEKQL 223 (343)
T ss_dssp ----TC-------EEEEECSSCC------GGGT----TTCE----ECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHH
T ss_pred ----CC-------EEEEECCChh------hhhh----cccc----ccCHHHHHhc--CCEEEEcCCCCHHHHHHhhHHHH
Confidence 64 6888888531 0010 0111 1268888876 78777432 12357888888
Q ss_pred HHHhcCCCCcEEEEcC
Q 012553 431 EAMASFNEVVFQALLW 446 (461)
Q Consensus 431 ~~Ma~~~erPIIF~Ls 446 (461)
+.|.+ ..++.=.|
T Consensus 224 ~~mk~---gailIN~a 236 (343)
T 2yq5_A 224 KEMKK---SAYLINCA 236 (343)
T ss_dssp HHSCT---TCEEEECS
T ss_pred hhCCC---CcEEEECC
Confidence 88764 45555444
No 136
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=88.55 E-value=0.29 Score=49.50 Aligned_cols=101 Identities=16% Similarity=0.168 Sum_probs=64.4
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCc--------CCCChhhhhhccc---
Q 012553 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRK--------DSLQHFKKPWAHE--- 396 (461)
Q Consensus 328 ~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~--------~~L~~~k~~fA~~--- 396 (461)
+|++.||+|+|||.+|..+|+.|+.+ |+ .+|.++|.+=+ ..+.- +++-..|..-|..
T Consensus 31 kL~~~~VlIvGaGGlGs~va~~La~a-----GV------g~ItlvD~D~V-e~SNL~RQ~l~~~~diG~~Ka~aaa~~L~ 98 (340)
T 3rui_A 31 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNGTV-SYSNPVRQALYNFEDCGKPKAELAAASLK 98 (340)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCCBC-CTTSTTTSTTCCGGGTTSBHHHHHHHHHH
T ss_pred HHhCCEEEEECCCHHHHHHHHHHHHc-----CC------CEEEEecCCEe-ccccccccccCChhhcChHHHHHHHHHHH
Confidence 57889999999999999999999875 65 69999998632 21110 0011112111110
Q ss_pred --cCCC--------------------------CCHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEE
Q 012553 397 --HEPV--------------------------NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQAL 444 (461)
Q Consensus 397 --~~~~--------------------------~~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~ 444 (461)
.+.. .++.+.++. .|++|-++-.. =|.-.+..++.....|+|-+
T Consensus 99 ~inP~v~v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~--~DlVvd~tDn~--~tR~lin~~c~~~~~plI~a 170 (340)
T 3rui_A 99 RIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKE--HDIIFLLVDSR--ESRWLPSLLSNIENKTVINA 170 (340)
T ss_dssp HHCTTCEEEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHH--CSEEEECCSST--GGGHHHHHHHHHTTCEEEEE
T ss_pred HhCCCCEEEEEeccccccCcccchhhhhcCCHHHHHhhhcc--CCEEEecCCCH--HHHHHHHHHHHHcCCcEEEe
Confidence 0000 124566666 78888776543 36777888888788888864
No 137
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=88.49 E-value=2.5 Score=42.36 Aligned_cols=97 Identities=16% Similarity=0.253 Sum_probs=58.9
Q ss_pred hhHHHHHHHHHHHHH--------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceE
Q 012553 310 TASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKI 369 (461)
Q Consensus 310 TaaV~LAgll~Alk~--------------------~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i 369 (461)
+|=-++|-+|+..|- .|..|.+.+|.|+|.|..|..+|+.+.. .|+ ++
T Consensus 130 vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~~vA~~l~~-----~G~-------~V 197 (340)
T 4dgs_A 130 VADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGRALASRAEA-----FGM-------SV 197 (340)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EE
T ss_pred HHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCCHHHHHHHHHHHH-----CCC-------EE
Confidence 444567777776652 2467899999999999999999998853 254 68
Q ss_pred EEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhcccCCcEEEecc----CCCCCCCHHHHHHHhc
Q 012553 370 CLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEAMAS 435 (461)
Q Consensus 370 ~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkptvLIG~S----~~~g~Ft~evv~~Ma~ 435 (461)
+.+|+..- .. . .+ ....+|.|+++. .|+++=.- ...+.++++.++.|.+
T Consensus 198 ~~~dr~~~----~~--~-----~~----~~~~sl~ell~~--aDvVil~vP~t~~t~~li~~~~l~~mk~ 250 (340)
T 4dgs_A 198 RYWNRSTL----SG--V-----DW----IAHQSPVDLARD--SDVLAVCVAASAATQNIVDASLLQALGP 250 (340)
T ss_dssp EEECSSCC----TT--S-----CC----EECSSHHHHHHT--CSEEEECC----------CHHHHHHTTT
T ss_pred EEEcCCcc----cc--c-----Cc----eecCCHHHHHhc--CCEEEEeCCCCHHHHHHhhHHHHhcCCC
Confidence 88887421 10 0 01 012467777765 67766321 1124666676776654
No 138
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=88.37 E-value=0.81 Score=45.80 Aligned_cols=100 Identities=19% Similarity=0.116 Sum_probs=53.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCcc----ccCCc--CCCChhhhhhccccCCCCCHH
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI----VSSRK--DSLQHFKKPWAHEHEPVNNLL 404 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi----~~~R~--~~L~~~k~~fA~~~~~~~~L~ 404 (461)
..||.|+|+|+-|.++|..+... | .+++++|++--. ...+. ..++..+ +........++.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~-----G-------~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~--l~~~i~~t~d~~ 94 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK-----G-------QKVRLWSYESDHVDEMQAEGVNNRYLPNYP--FPETLKAYCDLK 94 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT-----T-------CCEEEECSCHHHHHHHHHHSSBTTTBTTCC--CCTTEEEESCHH
T ss_pred CCeEEEECccHHHHHHHHHHHHC-----C-------CeEEEEeCCHHHHHHHHHcCCCcccCCCCc--cCCCeEEECCHH
Confidence 46899999999999999988653 4 357777774110 00000 0011100 000000114677
Q ss_pred HhhcccCCcEEEeccCCCCCCCHHHHHHHhcCC-CCcEEEEcCCC
Q 012553 405 DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EVVFQALLWLI 448 (461)
Q Consensus 405 eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIF~Lsnp 448 (461)
|+++. +|++| ++.+. .+.+++++.++.+. +..+|..++|.
T Consensus 95 ea~~~--aDvVi-laVp~-~~~~~vl~~i~~~l~~~~ivvs~~kG 135 (356)
T 3k96_A 95 ASLEG--VTDIL-IVVPS-FAFHEVITRMKPLIDAKTRIAWGTKG 135 (356)
T ss_dssp HHHTT--CCEEE-ECCCH-HHHHHHHHHHGGGCCTTCEEEECCCS
T ss_pred HHHhc--CCEEE-ECCCH-HHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 77765 67666 33322 35666777766543 34456666663
No 139
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=88.36 E-value=5.4 Score=39.52 Aligned_cols=118 Identities=16% Similarity=0.094 Sum_probs=71.7
Q ss_pred CCCceeccCCCch---hHHHHHHHHHHHH-------------------HhCCCcccceEEEeCcchHHHHHHHHHHHHHH
Q 012553 298 TTHLVFNDDIQGT---ASVVLAGVVAALK-------------------LIGGTLAEHRFLFLGAGEAGTGIAELIALEIS 355 (461)
Q Consensus 298 ~~~~~FnDDiQGT---aaV~LAgll~Alk-------------------~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~ 355 (461)
..|+|.|---..+ |=-+++.+|+..| ..+..|.+.+|.|+|.|..|..+|+.+...
T Consensus 90 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~-- 167 (333)
T 1dxy_A 90 YGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVAIKLFKGF-- 167 (333)
T ss_dssp TTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEEEEECCSHHHHHHHHHHHHT--
T ss_pred CCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccCCCccCCCCCEEEEECcCHHHHHHHHHHHHC--
Confidence 4677777533333 3446788887765 134678999999999999999999988642
Q ss_pred HhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhcccCCcEEEeccC----CCCCCCHHHHH
Q 012553 356 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIE 431 (461)
Q Consensus 356 ~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkptvLIG~S~----~~g~Ft~evv~ 431 (461)
|+ +++.+|+..- . . .. .++. ..+|.|+++. .|+++=.-- ..++|+++.++
T Consensus 168 ---G~-------~V~~~d~~~~----~-~-~~----~~~~----~~~l~ell~~--aDvV~~~~P~~~~t~~li~~~~l~ 221 (333)
T 1dxy_A 168 ---GA-------KVIAYDPYPM----K-G-DH----PDFD----YVSLEDLFKQ--SDVIDLHVPGIEQNTHIINEAAFN 221 (333)
T ss_dssp ---TC-------EEEEECSSCC----S-S-CC----TTCE----ECCHHHHHHH--CSEEEECCCCCGGGTTSBCHHHHH
T ss_pred ---CC-------EEEEECCCcc----h-h-hH----hccc----cCCHHHHHhc--CCEEEEcCCCchhHHHHhCHHHHh
Confidence 64 6888887531 0 1 11 1111 1256666665 666664321 12466666776
Q ss_pred HHhcCCCCcEEEEcC
Q 012553 432 AMASFNEVVFQALLW 446 (461)
Q Consensus 432 ~Ma~~~erPIIF~Ls 446 (461)
.|.+ ..++.=.|
T Consensus 222 ~mk~---ga~lIn~s 233 (333)
T 1dxy_A 222 LMKP---GAIVINTA 233 (333)
T ss_dssp HSCT---TEEEEECS
T ss_pred hCCC---CcEEEECC
Confidence 6654 34544444
No 140
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=88.34 E-value=1.5 Score=44.09 Aligned_cols=96 Identities=8% Similarity=0.087 Sum_probs=62.6
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccc-cCCCCCHHHhh
Q 012553 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAV 407 (461)
Q Consensus 329 l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~-~~~~~~L~eaV 407 (461)
++..||.|+|+|..|..+|..|... | -+++++|+.- +.. +.++.. .....++.|++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~-----G-------~~V~v~dr~~-------~~~----~~l~~~g~~~~~s~~e~~ 76 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKG-----G-------HECVVYDLNV-------NAV----QALEREGIAGARSIEEFC 76 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCH-------HHH----HHHHTTTCBCCSSHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhC-----C-------CEEEEEeCCH-------HHH----HHHHHCCCEEeCCHHHHH
Confidence 3467999999999999999988753 5 3677777631 111 122221 12246899998
Q ss_pred ccc-CCcEEEeccCCCCCCCHHHHHHHhcCC-CCcEEEEcCCCC
Q 012553 408 KVI-KPTILIGSSGVGRTFTKEVIEAMASFN-EVVFQALLWLIR 449 (461)
Q Consensus 408 ~~v-kptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIF~Lsnp~ 449 (461)
+.. +||++| ++...+ -.+++++.+.+.- +.-||.-+||..
T Consensus 77 ~~a~~~DvVi-~~vp~~-~v~~vl~~l~~~l~~g~iiId~st~~ 118 (358)
T 4e21_A 77 AKLVKPRVVW-LMVPAA-VVDSMLQRMTPLLAANDIVIDGGNSH 118 (358)
T ss_dssp HHSCSSCEEE-ECSCGG-GHHHHHHHHGGGCCTTCEEEECSSCC
T ss_pred hcCCCCCEEE-EeCCHH-HHHHHHHHHHhhCCCCCEEEeCCCCC
Confidence 873 568887 333344 7788888887643 566888887754
No 141
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=88.25 E-value=0.23 Score=52.08 Aligned_cols=109 Identities=14% Similarity=0.173 Sum_probs=68.8
Q ss_pred cceEEEeCcchH-HHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhc-c-c-cCC---CCCH
Q 012553 331 EHRFLFLGAGEA-GTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-H-E-HEP---VNNL 403 (461)
Q Consensus 331 d~riv~~GAGsA-giGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA-~-~-~~~---~~~L 403 (461)
..||.|+|||+. +.++|..|+.. ..++. ...++|+|.+- ++.+.+......+. . . ... ..++
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~---~~~l~----~~eV~L~Di~~----e~~~~~~~~~~~~l~~~~~~~~I~~t~D~ 96 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDH---LEEFP----IRKLKLYDNDK----ERQDRIAGACDVFIREKAPDIEFAATTDP 96 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHT---TTTSC----EEEEEEECSCH----HHHHHHHHHHHHHHHHHCTTSEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhC---CCCCC----CCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCCEEEEECCH
Confidence 469999999996 55566665431 01331 35799999853 21111111112221 1 1 111 2579
Q ss_pred HHhhcccCCcEEEeccCCCCC----------------------------------CCHHHHHHHhcCCCCcEEEEcCCCC
Q 012553 404 LDAVKVIKPTILIGSSGVGRT----------------------------------FTKEVIEAMASFNEVVFQALLWLIR 449 (461)
Q Consensus 404 ~eaV~~vkptvLIG~S~~~g~----------------------------------Ft~evv~~Ma~~~erPIIF~Lsnp~ 449 (461)
.+++++ +|++|=+.+.++. .=+++++.|.+++..-+|+-.|||-
T Consensus 97 ~eal~~--AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPv 174 (472)
T 1u8x_X 97 EEAFTD--VDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPA 174 (472)
T ss_dssp HHHHSS--CSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCH
T ss_pred HHHHcC--CCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcH
Confidence 999998 9999866554321 2358899999999999999999998
Q ss_pred chh
Q 012553 450 KFN 452 (461)
Q Consensus 450 ~~~ 452 (461)
..+
T Consensus 175 di~ 177 (472)
T 1u8x_X 175 AIV 177 (472)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 142
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=88.22 E-value=0.61 Score=46.14 Aligned_cols=106 Identities=9% Similarity=0.091 Sum_probs=59.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhh-----hhc------cccCCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-----PWA------HEHEPV 400 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~-----~fA------~~~~~~ 400 (461)
.||.|+|+|..|.++|..+..+ |.....-..+++++|+..-+. .+. .....++ .|- ......
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~-----G~~~~~~~~~V~~~~r~~~~~-~~~-~~~~l~~~~~~~~~~~~~~~~~~i~~~ 94 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTN-----AKNNYLFENEVRMWIRDEFVN-GER-MVDIINNKHENTKYLKGVPLPHNIVAH 94 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHH-----HHHCTTBCSCEEEECCSCC----CC-HHHHHHHHCBCTTTSTTCBCCTTEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHc-----CCccCCCCCeEEEEECChhhh-hHH-HHHHHHhcCcccccCCcccCcCCeEEE
Confidence 4899999999999999998765 310000004688888753210 000 0111100 000 000012
Q ss_pred CCHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhc----CC-CCcEEEEcCCC
Q 012553 401 NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMAS----FN-EVVFQALLWLI 448 (461)
Q Consensus 401 ~~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~----~~-erPIIF~Lsnp 448 (461)
.++.|+++. +|++|= +... ...+++++.++. .. +..+|..++|.
T Consensus 95 ~~~~ea~~~--aDvVil-av~~-~~~~~vl~~i~~~~~~~l~~~~ivvs~~~G 143 (375)
T 1yj8_A 95 SDLASVIND--ADLLIF-IVPC-QYLESVLASIKESESIKIASHAKAISLTKG 143 (375)
T ss_dssp SSTHHHHTT--CSEEEE-CCCH-HHHHHHHHHHTC---CCCCTTCEEEECCCS
T ss_pred CCHHHHHcC--CCEEEE-cCCH-HHHHHHHHHHhhhhhccCCCCCEEEEeCCc
Confidence 467788876 787763 3322 467888888875 33 45688888875
No 143
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=87.95 E-value=0.24 Score=49.59 Aligned_cols=115 Identities=13% Similarity=0.142 Sum_probs=69.9
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccC--CCCCHHH
Q 012553 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHE--PVNNLLD 405 (461)
Q Consensus 328 ~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~--~~~~L~e 405 (461)
+....||.|+|||..|.++|-.++.. |+ ...+.++|.+-=..++-.-.|.+. ..|..... ...+..
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~~~d~~- 83 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMK-----DL-----ADELALVDVIEDKLKGEMMDLQHG-SLFLKTPKIVSSKDYS- 83 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSCHHHHHHHHHHHHHT-GGGCSCCEEEECSSGG-
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhC-----CC-----CceEEEEeCChHHHHHHHHhhhhh-hhccCCCeEEEcCCHH-
Confidence 34567999999999999999888652 54 357999997410000000002111 12322110 123444
Q ss_pred hhcccCCcEEEeccCCC---CC-----------CCHHHHHHHhcCCCCcEEEEcCCCCchhhhhhh
Q 012553 406 AVKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEVVFQALLWLIRKFNFCSLF 457 (461)
Q Consensus 406 aV~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIF~Lsnp~~~~~~~~~ 457 (461)
++++ .|++|=+.+.+ |- +-+++++.|++++..-+|+-.+||-+.+ |..+
T Consensus 84 ~~~~--aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNPvdi~-t~~~ 146 (331)
T 4aj2_A 84 VTAN--SKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNPVDIL-TYVA 146 (331)
T ss_dssp GGTT--EEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHH-HHHH
T ss_pred HhCC--CCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChHHHH-HHHH
Confidence 5777 89887444433 31 2257888889999999999999998865 4433
No 144
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=87.68 E-value=0.29 Score=48.07 Aligned_cols=99 Identities=16% Similarity=0.254 Sum_probs=64.7
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcc------ccCCC---CCH
Q 012553 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH------EHEPV---NNL 403 (461)
Q Consensus 333 riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~------~~~~~---~~L 403 (461)
||.|+|||..|.++|-.++.. |+ ..++|+|.+ .++ +......+.+ ..... .+.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~-----~l------~el~L~Di~----~~~---~~g~~~dl~~~~~~~~~~~~i~~t~d~ 62 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR-----GY------DDLLLIART----PGK---PQGEALDLAHAAAELGVDIRISGSNSY 62 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-----TC------SCEEEECSS----TTH---HHHHHHHHHHHHHHHTCCCCEEEESCG
T ss_pred CEEEECcCHHHHHHHHHHHhC-----CC------CEEEEEcCC----hhh---HHHHHHHHHHhhhhcCCCeEEEECCCH
Confidence 689999999999999776543 54 379999985 221 1111111111 01111 355
Q ss_pred HHhhcccCCcEEEeccCCCCC--------------CCHHHHHHHhcCCCCcEEEEcCCCCchh
Q 012553 404 LDAVKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEVVFQALLWLIRKFN 452 (461)
Q Consensus 404 ~eaV~~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIF~Lsnp~~~~ 452 (461)
+++++ +|++|=+.+.+.. .-+++++.|.+++...+|+-.|||-+.+
T Consensus 63 -~a~~~--aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~ 122 (308)
T 2d4a_B 63 -EDMRG--SDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTNPVDAM 122 (308)
T ss_dssp -GGGTT--CSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHH
T ss_pred -HHhCC--CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCchHHH
Confidence 67887 9999866554431 2467888888888888777789998865
No 145
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=87.50 E-value=0.5 Score=51.41 Aligned_cols=38 Identities=26% Similarity=0.428 Sum_probs=33.6
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 328 ~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
+|++.||+|+|||..|..+|+.|+.+ |+ .+|.++|.+=
T Consensus 323 kL~~arVLIVGaGGLGs~vA~~La~a-----GV------G~ItLvD~D~ 360 (615)
T 4gsl_A 323 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNGT 360 (615)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCCB
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEcCCC
Confidence 67889999999999999999999875 65 6999999874
No 146
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=87.50 E-value=0.42 Score=45.31 Aligned_cols=102 Identities=15% Similarity=0.212 Sum_probs=61.2
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccC--Cc-----CCCChhhhh-----hcc
Q 012553 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSS--RK-----DSLQHFKKP-----WAH 395 (461)
Q Consensus 328 ~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~--R~-----~~L~~~k~~-----fA~ 395 (461)
+|++.+|+|+|+|..|..+|+.|+.+ |+ .+|.++|.+-+=..+ |. +++-..|.. +.+
T Consensus 28 ~l~~~~VlVvG~Gg~G~~va~~La~~-----Gv------~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~ 96 (249)
T 1jw9_B 28 ALKDSRVLIVGLGGLGCAASQYLASA-----GV------GNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTR 96 (249)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHH
T ss_pred HHhCCeEEEEeeCHHHHHHHHHHHHc-----CC------CeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHH
Confidence 46678999999999999999999875 64 689999987421110 00 001111111 111
Q ss_pred c---------cCCC--CCHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEE
Q 012553 396 E---------HEPV--NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQAL 444 (461)
Q Consensus 396 ~---------~~~~--~~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~ 444 (461)
- .... .++.+.++. .|++|.++.. .-+...+...+.....|+|.+
T Consensus 97 ~np~~~v~~~~~~~~~~~~~~~~~~--~DvVi~~~d~--~~~~~~l~~~~~~~~~p~i~~ 152 (249)
T 1jw9_B 97 INPHIAITPVNALLDDAELAALIAE--HDLVLDCTDN--VAVRNQLNAGCFAAKVPLVSG 152 (249)
T ss_dssp HCTTSEEEEECSCCCHHHHHHHHHT--SSEEEECCSS--HHHHHHHHHHHHHHTCCEEEE
T ss_pred HCCCcEEEEEeccCCHhHHHHHHhC--CCEEEEeCCC--HHHHHHHHHHHHHcCCCEEEe
Confidence 0 0001 135566665 8999987643 235556666665566888875
No 147
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=87.29 E-value=1.4 Score=46.29 Aligned_cols=98 Identities=11% Similarity=0.071 Sum_probs=61.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhh-hhc-cccCCCCCHHHhhcc
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWA-HEHEPVNNLLDAVKV 409 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~-~fA-~~~~~~~~L~eaV~~ 409 (461)
.+|.|+|+|..|.++|..|... |. +++++|+.- +..+...+ ... .......++.|+++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~dr~~-------~~~~~l~~~~~~~~gi~~~~s~~e~v~~ 71 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH-----GF-------TVCAYNRTQ-------SKVDHFLANEAKGKSIIGATSIEDFISK 71 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS-------HHHHHHHHTTTTTSSEECCSSHHHHHHT
T ss_pred CCEEEEeeHHHHHHHHHHHHHC-----CC-------EEEEEeCCH-------HHHHHHHcccccCCCeEEeCCHHHHHhc
Confidence 4799999999999999998753 54 577777631 11111111 000 011123578888875
Q ss_pred c-CCcEEEeccCCCCCCCHHHHHHHhcCCC-CcEEEEcCCCC
Q 012553 410 I-KPTILIGSSGVGRTFTKEVIEAMASFNE-VVFQALLWLIR 449 (461)
Q Consensus 410 v-kptvLIG~S~~~g~Ft~evv~~Ma~~~e-rPIIF~Lsnp~ 449 (461)
. +||++| ++.+.+...+++++.+.+.-+ ..||.-+||..
T Consensus 72 l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~ 112 (497)
T 2p4q_A 72 LKRPRKVM-LLVKAGAPVDALINQIVPLLEKGDIIIDGGNSH 112 (497)
T ss_dssp SCSSCEEE-ECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred CCCCCEEE-EEcCChHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 3 488777 444444567888888876543 46888888864
No 148
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=87.28 E-value=1.6 Score=43.48 Aligned_cols=66 Identities=20% Similarity=0.127 Sum_probs=46.7
Q ss_pred CCceeccCCC---chhHHHHHHHHHHHHH----------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcC
Q 012553 299 THLVFNDDIQ---GTASVVLAGVVAALKL----------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTK 359 (461)
Q Consensus 299 ~~~~FnDDiQ---GTaaV~LAgll~Alk~----------------~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~G 359 (461)
.|++.|---- .+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+... |
T Consensus 89 gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G 163 (324)
T 3hg7_A 89 DYQLTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHF-----G 163 (324)
T ss_dssp SSEEECCCSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCEEEEECCSHHHHHHHHHHHHT-----T
T ss_pred CEEEEECCCcChHHHHHHHHHHHHHHHhChHHHHHHHhhCCCcCCCCcccccceEEEEEECHHHHHHHHHHHhC-----C
Confidence 4555553211 2344467777776652 35679999999999999999999998643 6
Q ss_pred CChhhccceEEEEcCCC
Q 012553 360 APVEETRKKICLVDSKG 376 (461)
Q Consensus 360 ls~eeA~~~i~lvDs~G 376 (461)
+ +++.+|+..
T Consensus 164 ~-------~V~~~dr~~ 173 (324)
T 3hg7_A 164 M-------KVLGVSRSG 173 (324)
T ss_dssp C-------EEEEECSSC
T ss_pred C-------EEEEEcCCh
Confidence 4 688888764
No 149
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=87.16 E-value=1.9 Score=42.88 Aligned_cols=67 Identities=21% Similarity=0.311 Sum_probs=48.2
Q ss_pred CCCceeccCC---CchhHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHH
Q 012553 298 TTHLVFNDDI---QGTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (461)
Q Consensus 298 ~~~~~FnDDi---QGTaaV~LAgll~Alk~------------------~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~ 356 (461)
..|+|.|--- +.+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+...
T Consensus 83 ~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~~~~~l~gktvGIiGlG~IG~~vA~~l~~~--- 159 (324)
T 3evt_A 83 AGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPMTTSTLTGQQLLIYGTGQIGQSLAAKASAL--- 159 (324)
T ss_dssp TTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSSCCCCSTTCEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCCCCccccCCeEEEECcCHHHHHHHHHHHhC---
Confidence 4677777543 22444467777776642 26679999999999999999999988642
Q ss_pred hcCCChhhccceEEEEcCCC
Q 012553 357 QTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 357 ~~Gls~eeA~~~i~lvDs~G 376 (461)
|+ +++.+|+..
T Consensus 160 --G~-------~V~~~dr~~ 170 (324)
T 3evt_A 160 --GM-------HVIGVNTTG 170 (324)
T ss_dssp --TC-------EEEEEESSC
T ss_pred --CC-------EEEEECCCc
Confidence 64 688888753
No 150
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=87.07 E-value=1.1 Score=42.26 Aligned_cols=35 Identities=23% Similarity=0.250 Sum_probs=27.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
-.||.|+|+|..|.++|..+... |. ..+++++|++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~-----g~-----~~~V~~~d~~ 40 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRD-----HP-----HYKIVGYNRS 40 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSS
T ss_pred cceEEEEeeCHHHHHHHHHHHhC-----CC-----CcEEEEEcCC
Confidence 35899999999999999988653 32 1368888864
No 151
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=87.07 E-value=0.58 Score=38.40 Aligned_cols=98 Identities=16% Similarity=0.172 Sum_probs=52.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhh----cc-ccCCCCCHHH
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPW----AH-EHEPVNNLLD 405 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~f----A~-~~~~~~~L~e 405 (461)
+.+|+|+|+|..|..+|+.+... | .+++++|++- +.+...++.+ .. +......|.+
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~-----g-------~~v~~~d~~~-------~~~~~~~~~~~~~~~~~d~~~~~~l~~ 64 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEK-----G-------HDIVLIDIDK-------DICKKASAEIDALVINGDCTKIKTLED 64 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESCH-------HHHHHHHHHCSSEEEESCTTSHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECCH-------HHHHHHHHhcCcEEEEcCCCCHHHHHH
Confidence 35899999999999999888642 4 3688888731 1111111111 01 1111112333
Q ss_pred h-hcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcCCCCc
Q 012553 406 A-VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLWLIRK 450 (461)
Q Consensus 406 a-V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Lsnp~~ 450 (461)
+ ++ ++|++|=+.... ..+..+.+.........||.-.++|..
T Consensus 65 ~~~~--~~d~vi~~~~~~-~~~~~~~~~~~~~~~~~ii~~~~~~~~ 107 (140)
T 1lss_A 65 AGIE--DADMYIAVTGKE-EVNLMSSLLAKSYGINKTIARISEIEY 107 (140)
T ss_dssp TTTT--TCSEEEECCSCH-HHHHHHHHHHHHTTCCCEEEECSSTTH
T ss_pred cCcc--cCCEEEEeeCCc-hHHHHHHHHHHHcCCCEEEEEecCHhH
Confidence 3 34 489988765432 222223333334445678877777654
No 152
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=87.04 E-value=5.5 Score=39.60 Aligned_cols=121 Identities=16% Similarity=0.054 Sum_probs=76.6
Q ss_pred CCceeccCCC---chhHHHHHHHHHHHHH-------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHH
Q 012553 299 THLVFNDDIQ---GTASVVLAGVVAALKL-------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (461)
Q Consensus 299 ~~~~FnDDiQ---GTaaV~LAgll~Alk~-------------------~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~ 356 (461)
.|+|.|=--- .+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|-.+|+.+...
T Consensus 87 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~~--- 163 (334)
T 2pi1_A 87 GILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLAF--- 163 (334)
T ss_dssp TCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT---
T ss_pred CeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCccceeccCceEEEECcCHHHHHHHHHHHHC---
Confidence 4555554222 2444567777777652 36679999999999999999999988642
Q ss_pred hcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhcccCCcEEEecc----CCCCCCCHHHHHH
Q 012553 357 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEA 432 (461)
Q Consensus 357 ~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkptvLIG~S----~~~g~Ft~evv~~ 432 (461)
|+ +++.+|+..- +... ...-...+|.|+++. .|+++=.- ...+.|+++.++.
T Consensus 164 --G~-------~V~~~d~~~~----------~~~~---~~g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~ 219 (334)
T 2pi1_A 164 --GM-------KVLCYDVVKR----------EDLK---EKGCVYTSLDELLKE--SDVISLHVPYTKETHHMINEERISL 219 (334)
T ss_dssp --TC-------EEEEECSSCC----------HHHH---HTTCEECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHHHH
T ss_pred --cC-------EEEEECCCcc----------hhhH---hcCceecCHHHHHhh--CCEEEEeCCCChHHHHhhCHHHHhh
Confidence 64 6888887421 0000 001112358888876 88877431 2345788888888
Q ss_pred HhcCCCCcEEEEcCCCC
Q 012553 433 MASFNEVVFQALLWLIR 449 (461)
Q Consensus 433 Ma~~~erPIIF~Lsnp~ 449 (461)
|.+ ..|+.=.|--.
T Consensus 220 mk~---gailIN~aRg~ 233 (334)
T 2pi1_A 220 MKD---GVYLINTARGK 233 (334)
T ss_dssp SCT---TEEEEECSCGG
T ss_pred CCC---CcEEEECCCCc
Confidence 864 55666555433
No 153
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=87.01 E-value=1.7 Score=37.65 Aligned_cols=97 Identities=12% Similarity=0.055 Sum_probs=59.0
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhc-cccCCCCCHHHhhcc
Q 012553 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-HEHEPVNNLLDAVKV 409 (461)
Q Consensus 332 ~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA-~~~~~~~~L~eaV~~ 409 (461)
.+|+|.|| |-.|..+++.|++. | .++++++++.- +...+......+. -+.....++.++++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~-----g-------~~V~~~~r~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 67 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQA-----G-------YEVTVLVRDSS----RLPSEGPRPAHVVVGDVLQAADVDKTVAG 67 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT-----T-------CEEEEEESCGG----GSCSSSCCCSEEEESCTTSHHHHHHHHTT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC-----C-------CeEEEEEeChh----hcccccCCceEEEEecCCCHHHHHHHHcC
Confidence 68999998 88888888888652 4 36888877521 1011101111111 121222457788886
Q ss_pred cCCcEEEeccCCCCC---------CCHHHHHHHhcCCCCcEEEEcC
Q 012553 410 IKPTILIGSSGVGRT---------FTKEVIEAMASFNEVVFQALLW 446 (461)
Q Consensus 410 vkptvLIG~S~~~g~---------Ft~evv~~Ma~~~erPIIF~Ls 446 (461)
+|++|=+.+.... .+..++++|.+..-+.|||.=|
T Consensus 68 --~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss 111 (206)
T 1hdo_A 68 --QDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS 111 (206)
T ss_dssp --CSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred --CCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEee
Confidence 8999987765431 2577888887765567777544
No 154
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=86.99 E-value=5 Score=39.92 Aligned_cols=39 Identities=18% Similarity=0.112 Sum_probs=31.7
Q ss_pred CCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 326 g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
|..|.+.+|.|+|.|..|..+|+.+..+ .|+ +++.+|+.
T Consensus 158 ~~~l~g~~vgIIG~G~IG~~vA~~l~~~----~G~-------~V~~~d~~ 196 (348)
T 2w2k_A 158 AHNPRGHVLGAVGLGAIQKEIARKAVHG----LGM-------KLVYYDVA 196 (348)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEECSS
T ss_pred CcCCCCCEEEEEEECHHHHHHHHHHHHh----cCC-------EEEEECCC
Confidence 5678999999999999999999988522 253 68888875
No 155
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=86.98 E-value=0.78 Score=47.13 Aligned_cols=97 Identities=18% Similarity=0.255 Sum_probs=52.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChh-hccceEEEEcCCC-------ccccCCcC--CCChhhhhhccccCCCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVE-ETRKKICLVDSKG-------LIVSSRKD--SLQHFKKPWAHEHEPVN 401 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~e-eA~~~i~lvDs~G-------Li~~~R~~--~L~~~k~~fA~~~~~~~ 401 (461)
.||.|+|||+=|+++|..+.+.-. +.+.. +-.=.+|..|..= .|...|.. .|+..+.+ ..-.-..
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~---~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp--~~i~~t~ 109 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCK---GYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLP--DNLVANP 109 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHH---HCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCC--SSEEEES
T ss_pred CeEEEECcCHHHHHHHHHHHHcCC---CccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCC--CCcEEeC
Confidence 399999999999999999987521 11000 0012577655431 12222211 12222111 0001125
Q ss_pred CHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCC
Q 012553 402 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN 437 (461)
Q Consensus 402 ~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~ 437 (461)
+|.++++. +|++|= +. |-.+..++++.+..+-
T Consensus 110 dl~~al~~--ad~ii~-av-Ps~~~r~~l~~l~~~~ 141 (391)
T 4fgw_A 110 DLIDSVKD--VDIIVF-NI-PHQFLPRICSQLKGHV 141 (391)
T ss_dssp CHHHHHTT--CSEEEE-CS-CGGGHHHHHHHHTTTS
T ss_pred CHHHHHhc--CCEEEE-EC-ChhhhHHHHHHhcccc
Confidence 79999987 777652 22 2257788888887654
No 156
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=86.97 E-value=0.39 Score=45.13 Aligned_cols=32 Identities=19% Similarity=0.390 Sum_probs=26.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.||.|+|+|..|..+|..+... | .+++++|++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG-----G-------NDVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhC-----C-------CcEEEEECC
Confidence 4899999999999999888653 4 268888874
No 157
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=86.95 E-value=0.64 Score=45.55 Aligned_cols=35 Identities=20% Similarity=0.479 Sum_probs=27.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
..||||+|||.||+.+|..|... |- .-+|.++|++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~-----~~-----~~~Vtlie~~ 36 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLA-----DP-----SIEVTLIEPN 36 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhc-----Cc-----CCeEEEEeCC
Confidence 46899999999999999988653 31 1278888875
No 158
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=86.93 E-value=0.45 Score=45.61 Aligned_cols=32 Identities=31% Similarity=0.530 Sum_probs=26.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.||.|+|+|..|.+||..++.+ |. +++++|+.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~-----G~-------~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT-----GH-------TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 5899999999999999998753 53 68888874
No 159
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=86.91 E-value=1.5 Score=45.30 Aligned_cols=71 Identities=25% Similarity=0.366 Sum_probs=47.3
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhcc
Q 012553 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (461)
Q Consensus 331 d~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~ 409 (461)
--|++|+|| |-+|.+.++.+... |.. ..++...|.+= ..+.. + + +.++.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~l-----Ga~----~~~V~v~D~~~---~~~g~-------~----------~-~~i~~ 263 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKV-----GIP----DANILKWDIKE---TSRGG-------P----------F-DEIPQ 263 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHT-----TCC----GGGEEEECHHH---HTTCS-------C----------C-THHHH
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhC-----CCC----cCceEEeeccc---cccCC-------c----------h-hhHhh
Confidence 468999999 99999999887542 631 11456666531 01100 0 1 23544
Q ss_pred cCCcEEEeccCC----CCCCCHHHHHHH
Q 012553 410 IKPTILIGSSGV----GRTFTKEVIEAM 433 (461)
Q Consensus 410 vkptvLIG~S~~----~g~Ft~evv~~M 433 (461)
.|++||+--. +-++|+|+++.|
T Consensus 264 --aDivIn~vlig~~aP~Lvt~e~v~~m 289 (394)
T 2qrj_A 264 --ADIFINCIYLSKPIAPFTNMEKLNNP 289 (394)
T ss_dssp --SSEEEECCCCCSSCCCSCCHHHHCCT
T ss_pred --CCEEEECcCcCCCCCcccCHHHHhcC
Confidence 8999998653 568999999999
No 160
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=86.85 E-value=0.49 Score=46.88 Aligned_cols=111 Identities=14% Similarity=0.143 Sum_probs=69.5
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC--ccccCCcCCCChhhhhhccccCCC--CCHH
Q 012553 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG--LIVSSRKDSLQHFKKPWAHEHEPV--NNLL 404 (461)
Q Consensus 329 l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G--Li~~~R~~~L~~~k~~fA~~~~~~--~~L~ 404 (461)
.+..||.|+|||..|.++|..++.. |+ ..+.++|.+- -..++....|.+ ..++......+ .+-.
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~-----g~------~~v~l~D~~~~~~~~~g~a~dl~~-~~~~~~~~~~i~~t~d~ 73 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQK-----EL------ADVVLVDIPQLENPTKGKALDMLE-ASPVQGFDANIIGTSDY 73 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCGGGHHHHHHHHHHHHH-HHHHHTCCCCEEEESCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEeccchHHHHHHhhhhHHH-hhhhccCCCEEEEcCCH
Confidence 3457999999999999999988652 53 2799999861 111111001221 12332211111 1225
Q ss_pred HhhcccCCcEEEeccCCC---CC-----------CCHHHHHHHhcCCCCcEEEEcCCCCchhh
Q 012553 405 DAVKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEVVFQALLWLIRKFNF 453 (461)
Q Consensus 405 eaV~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIF~Lsnp~~~~~ 453 (461)
+++++ +|++|=+.+.+ |- +-+++++.+++++..-+|+-.|||-+.+-
T Consensus 74 ~a~~~--aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNPvd~~t 134 (315)
T 3tl2_A 74 ADTAD--SDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNPVDAMT 134 (315)
T ss_dssp GGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHH
T ss_pred HHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCChHHHHH
Confidence 67777 89887554433 21 23578888888998999999999987654
No 161
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=86.49 E-value=0.97 Score=41.98 Aligned_cols=36 Identities=17% Similarity=0.288 Sum_probs=27.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.||.|+|+|..|.++|..+... |.. ..++++++|+.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~-----g~~---~~~~V~~~~r~ 38 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK-----NIV---SSNQIICSDLN 38 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC
T ss_pred CeEEEECccHHHHHHHHHHHhC-----CCC---CCCeEEEEeCC
Confidence 5899999999999999988753 531 12478888873
No 162
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=86.40 E-value=0.92 Score=43.89 Aligned_cols=48 Identities=8% Similarity=0.146 Sum_probs=36.2
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 316 Agll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.|+..+++-.|.. .+.+++|+|||.||.+++..|... |. ++|+++++.
T Consensus 105 ~G~~~~l~~~~~~-~~~~vlvlGaGgaarav~~~L~~~-----G~------~~i~v~nRt 152 (271)
T 1npy_A 105 IAIVKLIEKYHLN-KNAKVIVHGSGGMAKAVVAAFKNS-----GF------EKLKIYARN 152 (271)
T ss_dssp HHHHHHHHHTTCC-TTSCEEEECSSTTHHHHHHHHHHT-----TC------CCEEEECSC
T ss_pred HHHHHHHHHhCCC-CCCEEEEECCcHHHHHHHHHHHHC-----CC------CEEEEEeCC
Confidence 5666677665654 568999999999999998887642 53 578888773
No 163
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=86.34 E-value=5.3 Score=39.12 Aligned_cols=38 Identities=18% Similarity=0.182 Sum_probs=31.7
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 327 ~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
..|.+.+|.|+|.|..|..+|+.+... |+ +++.+|+..
T Consensus 118 ~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~dr~~ 155 (290)
T 3gvx_A 118 TLLYGKALGILGYGGIGRRVAHLAKAF-----GM-------RVIAYTRSS 155 (290)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSSC
T ss_pred eeeecchheeeccCchhHHHHHHHHhh-----Cc-------EEEEEeccc
Confidence 458899999999999999999998753 64 788888753
No 164
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=86.30 E-value=0.5 Score=46.08 Aligned_cols=111 Identities=16% Similarity=0.067 Sum_probs=66.3
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCc---cccCCcCCCChhhhhhccccCCCCCHHHhh
Q 012553 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL---IVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 407 (461)
Q Consensus 332 ~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GL---i~~~R~~~L~~~k~~fA~~~~~~~~L~eaV 407 (461)
.||+|.|| |..|..++..|+. .|.--..-...++++|...- ......+ +.+...+|..+.....++.+++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~-----~g~~~~~~~~ev~l~D~~~~~~~~~g~~~d-l~~~~~~~~~di~~~~~~~~a~ 78 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAA-----GEMLGKDQPVILQLLEIPQAMKALEGVVME-LEDCAFPLLAGLEATDDPKVAF 78 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHHHH-HHTTTCTTEEEEEEESCHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCCCCCCCCCEEEEEeCCCchhhccchhhh-hhcccccccCCeEeccChHHHh
Confidence 58999997 9999999988754 24310001137999997420 0000001 1111112222211225688899
Q ss_pred cccCCcEEEeccCCCCC--------------CCHHHHHHHhcCC-CCcEEEEcCCCCc
Q 012553 408 KVIKPTILIGSSGVGRT--------------FTKEVIEAMASFN-EVVFQALLWLIRK 450 (461)
Q Consensus 408 ~~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~-erPIIF~Lsnp~~ 450 (461)
++ +|++|=+.+.+.. .|.++++++.+++ .+.+++-.|||..
T Consensus 79 ~~--~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~ 134 (327)
T 1y7t_A 79 KD--ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPAN 134 (327)
T ss_dssp TT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHH
T ss_pred CC--CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchh
Confidence 86 9999977665431 3566788888875 5668888999974
No 165
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=86.00 E-value=2.1 Score=41.65 Aligned_cols=38 Identities=18% Similarity=0.213 Sum_probs=27.5
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
+..||.|+|+|..|.++|..|..+ |.. ...+++++|+.
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~-----G~~---~~~~V~v~~r~ 58 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAA-----GVL---AAHKIMASSPD 58 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----CCC---CcceEEEECCC
Confidence 345899999999999999988653 531 12468888763
No 166
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=85.98 E-value=1 Score=41.86 Aligned_cols=95 Identities=12% Similarity=0.019 Sum_probs=55.2
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhh---hhhccccCCCCCHHHhhcc
Q 012553 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK---KPWAHEHEPVNNLLDAVKV 409 (461)
Q Consensus 333 riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k---~~fA~~~~~~~~L~eaV~~ 409 (461)
||.|+|+|..|..+|..+... | .+++++|+.- .+.+.+.... ..+-.. ... +..++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~~~~-~~~-~~~~~~~~ 63 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ-----G-------HEVQGWLRVP----QPYCSVNLVETDGSIFNES-LTA-NDPDFLAT 63 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSC----CSEEEEEEECTTSCEEEEE-EEE-SCHHHHHT
T ss_pred eEEEECcCHHHHHHHHHHHhC-----C-------CCEEEEEcCc----cceeeEEEEcCCCceeeee-eee-cCccccCC
Confidence 799999999999999988653 4 3688888742 1111111100 000000 001 22466765
Q ss_pred cCCcEEEeccCCCCCCCHHHHHHHhcCC-CCcEEEEcCCCC
Q 012553 410 IKPTILIGSSGVGRTFTKEVIEAMASFN-EVVFQALLWLIR 449 (461)
Q Consensus 410 vkptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIF~Lsnp~ 449 (461)
+|++|=+-. .. -.+++++.++++. +..+|..++|.-
T Consensus 64 --~d~vi~~v~-~~-~~~~v~~~l~~~l~~~~~vv~~~~g~ 100 (291)
T 1ks9_A 64 --SDLLLVTLK-AW-QVSDAVKSLASTLPVTTPILLIHNGM 100 (291)
T ss_dssp --CSEEEECSC-GG-GHHHHHHHHHTTSCTTSCEEEECSSS
T ss_pred --CCEEEEEec-HH-hHHHHHHHHHhhCCCCCEEEEecCCC
Confidence 888774333 32 3688998887653 355666678753
No 167
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=85.89 E-value=0.86 Score=41.65 Aligned_cols=37 Identities=16% Similarity=0.272 Sum_probs=26.5
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 327 ~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
..+...||.|+|+|..|.++|..+... | .+++++|+.
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~-----g-------~~V~~~~~~ 51 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIA-----G-------HEVTYYGSK 51 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECTT
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEcCC
Confidence 346678999999999999999988653 4 368888864
No 168
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=85.89 E-value=1.6 Score=42.54 Aligned_cols=103 Identities=14% Similarity=0.100 Sum_probs=58.8
Q ss_pred HHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccc
Q 012553 317 GVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE 396 (461)
Q Consensus 317 gll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~ 396 (461)
+.+++..+. +....+|.|+|+|..|.+++..+... .|. ++++++|+. .+ ......+.+...
T Consensus 123 ~~la~~~la--~~~~~~igiIG~G~~g~~~a~~l~~~----~g~------~~V~v~dr~----~~---~~~~l~~~~~~~ 183 (312)
T 2i99_A 123 SAIATKFLK--PPSSEVLCILGAGVQAYSHYEIFTEQ----FSF------KEVRIWNRT----KE---NAEKFADTVQGE 183 (312)
T ss_dssp HHHHHHHHS--CTTCCEEEEECCSHHHHHHHHHHHHH----CCC------SEEEEECSS----HH---HHHHHHHHSSSC
T ss_pred HHHHHHHhC--CCCCcEEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HH---HHHHHHHHhhCC
Confidence 444443332 44667999999999999999887653 242 578888862 11 112222221100
Q ss_pred cCCCCCHHHhhcccCCcEEEeccCC-CCCCCHHHHHHHhcCCCCcEEEEcC
Q 012553 397 HEPVNNLLDAVKVIKPTILIGSSGV-GRTFTKEVIEAMASFNEVVFQALLW 446 (461)
Q Consensus 397 ~~~~~~L~eaV~~vkptvLIG~S~~-~g~Ft~evv~~Ma~~~erPIIF~Ls 446 (461)
.....++.|+++. +|++|=+... ..+|.++ ...+..+|+.++
T Consensus 184 ~~~~~~~~e~v~~--aDiVi~atp~~~~v~~~~------~l~~g~~vi~~g 226 (312)
T 2i99_A 184 VRVCSSVQEAVAG--ADVIITVTLATEPILFGE------WVKPGAHINAVG 226 (312)
T ss_dssp CEECSSHHHHHTT--CSEEEECCCCSSCCBCGG------GSCTTCEEEECC
T ss_pred eEEeCCHHHHHhc--CCEEEEEeCCCCcccCHH------HcCCCcEEEeCC
Confidence 1124689999987 8988854432 2234331 122355777774
No 169
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=85.81 E-value=0.98 Score=45.07 Aligned_cols=32 Identities=28% Similarity=0.336 Sum_probs=25.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs 374 (461)
-.||.|+|||..|.|||..++.+ |+ ++.++|.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~-----G~-------~V~l~D~ 37 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDI 37 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECS
T ss_pred CCeEEEECCcHHHHHHHHHHHhC-----CC-------eEEEEEC
Confidence 36899999999999999988764 65 5777875
No 170
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=85.80 E-value=3.4 Score=42.33 Aligned_cols=38 Identities=16% Similarity=0.150 Sum_probs=31.2
Q ss_pred CCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 326 g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
+..|.+.++.|+|.|..|..+|+.+... |+ +++.+|+.
T Consensus 186 ~~~l~gktvGIIGlG~IG~~vA~~l~a~-----G~-------~V~~~d~~ 223 (393)
T 2nac_A 186 AYDLEAMHVGTVAAGRIGLAVLRRLAPF-----DV-------HLHYTDRH 223 (393)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHGGG-----TC-------EEEEECSS
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHhC-----CC-------EEEEEcCC
Confidence 5679999999999999999999987532 53 68888864
No 171
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=85.73 E-value=1.1 Score=44.21 Aligned_cols=109 Identities=16% Similarity=0.110 Sum_probs=67.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCC--CCCHHHhhcc
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP--VNNLLDAVKV 409 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~--~~~L~eaV~~ 409 (461)
.||.|+|||..|..+|-+|+.. |+ ...+.|+|..-=..++-.-+|.+- ..|...... ..+-.+++++
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~G~a~DL~h~-~~~~~~~~~i~~~~d~~~~~~ 69 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHA-AAGIDKYPKIVGGADYSLLKG 69 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHH-HGGGTCCCEEEEESCGGGGTT
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCCCcchhhhhhhhcc-cccCCCCCeEecCCCHHHhCC
Confidence 3799999999999999887653 54 357999997421111100013221 112111111 1223456777
Q ss_pred cCCcEEEeccCCC---CC-----------CCHHHHHHHhcCCCCcEEEEcCCCCchhh
Q 012553 410 IKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEVVFQALLWLIRKFNF 453 (461)
Q Consensus 410 vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIF~Lsnp~~~~~ 453 (461)
.|++|=+++.+ |- +-+++++++++++...||.-.|||-+-+-
T Consensus 70 --aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsNPvd~~t 125 (294)
T 2x0j_A 70 --SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMDVMT 125 (294)
T ss_dssp --CSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSHHHHH
T ss_pred --CCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCcchhhH
Confidence 89998666544 31 22567888889999999999999987653
No 172
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=85.54 E-value=0.32 Score=43.64 Aligned_cols=94 Identities=13% Similarity=0.070 Sum_probs=56.2
Q ss_pred eEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhc---c--ccCCCCCHHHh
Q 012553 333 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA---H--EHEPVNNLLDA 406 (461)
Q Consensus 333 riv~~G-AGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA---~--~~~~~~~L~ea 406 (461)
||+|+| +|..|..+|..+... | .+++++|++- + .....++.+. . +.. ..++.++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~-----g-------~~V~~~~r~~----~---~~~~~~~~~~~~~~~~~~~-~~~~~~~ 61 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATL-----G-------HEIVVGSRRE----E---KAEAKAAEYRRIAGDASIT-GMKNEDA 61 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTT-----T-------CEEEEEESSH----H---HHHHHHHHHHHHHSSCCEE-EEEHHHH
T ss_pred eEEEEcCCCHHHHHHHHHHHHC-----C-------CEEEEEeCCH----H---HHHHHHHHhccccccCCCC-hhhHHHH
Confidence 799999 999999999988642 4 2688888641 1 1111111110 0 001 2467788
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcCCCCc
Q 012553 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLWLIRK 450 (461)
Q Consensus 407 V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Lsnp~~ 450 (461)
++. +|++|=+.. + ...+++++.+.+.....+|.-++|+-.
T Consensus 62 ~~~--~D~Vi~~~~-~-~~~~~~~~~l~~~~~~~~vi~~~~g~~ 101 (212)
T 1jay_A 62 AEA--CDIAVLTIP-W-EHAIDTARDLKNILREKIVVSPLVPVS 101 (212)
T ss_dssp HHH--CSEEEECSC-H-HHHHHHHHHTHHHHTTSEEEECCCCEE
T ss_pred Hhc--CCEEEEeCC-h-hhHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 876 788884433 3 235677776654323568888888543
No 173
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=85.41 E-value=4.2 Score=40.03 Aligned_cols=65 Identities=18% Similarity=0.181 Sum_probs=45.9
Q ss_pred CCCceeccCCC---chhHHHHHHHHHHHHH---------------------hCCCcccceEEEeCcchHHHHHHHHHHHH
Q 012553 298 TTHLVFNDDIQ---GTASVVLAGVVAALKL---------------------IGGTLAEHRFLFLGAGEAGTGIAELIALE 353 (461)
Q Consensus 298 ~~~~~FnDDiQ---GTaaV~LAgll~Alk~---------------------~g~~l~d~riv~~GAGsAgiGiA~ll~~~ 353 (461)
..|.|.|---- .+|=-+++.+|+..|- .+..+.+.+|.|+|.|..|-.+|+.+...
T Consensus 89 ~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~ 168 (320)
T 1gdh_A 89 RGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQGF 168 (320)
T ss_dssp TTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHTT
T ss_pred CCcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHHHHHHHHHC
Confidence 35666665332 2344467777777653 24568899999999999999999987532
Q ss_pred HHHhcCCChhhccceEEEEcC
Q 012553 354 ISKQTKAPVEETRKKICLVDS 374 (461)
Q Consensus 354 m~~~~Gls~eeA~~~i~lvDs 374 (461)
|. +++.+|+
T Consensus 169 -----G~-------~V~~~d~ 177 (320)
T 1gdh_A 169 -----DM-------DIDYFDT 177 (320)
T ss_dssp -----TC-------EEEEECS
T ss_pred -----CC-------EEEEECC
Confidence 53 6888887
No 174
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=85.39 E-value=1.3 Score=39.91 Aligned_cols=97 Identities=11% Similarity=0.067 Sum_probs=58.9
Q ss_pred CCcccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhh---h-hhcc-ccCCC
Q 012553 327 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK---K-PWAH-EHEPV 400 (461)
Q Consensus 327 ~~l~d~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k---~-~fA~-~~~~~ 400 (461)
.++++.+|+|.|| |-.|..+++.+++. | -++++++++. +.+...+ . .+.. +..
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~-----G-------~~V~~~~R~~-------~~~~~~~~~~~~~~~~~Dl~-- 75 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNK-----G-------HEPVAMVRNE-------EQGPELRERGASDIVVANLE-- 75 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEESSG-------GGHHHHHHTTCSEEEECCTT--
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhC-----C-------CeEEEEECCh-------HHHHHHHhCCCceEEEcccH--
Confidence 4578899999998 88999999888652 5 2788887742 1121111 1 1111 111
Q ss_pred CCHHHhhcccCCcEEEeccCCCCC------------CCHHHHHHHhcCCCCcEEEEcC
Q 012553 401 NNLLDAVKVIKPTILIGSSGVGRT------------FTKEVIEAMASFNEVVFQALLW 446 (461)
Q Consensus 401 ~~L~eaV~~vkptvLIG~S~~~g~------------Ft~evv~~Ma~~~erPIIF~Ls 446 (461)
.++.+++++ +|++|=+.+.... -+..+++++.+..-+-|||.=|
T Consensus 76 ~~~~~~~~~--~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 131 (236)
T 3e8x_A 76 EDFSHAFAS--IDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSS 131 (236)
T ss_dssp SCCGGGGTT--CSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECC
T ss_pred HHHHHHHcC--CCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEec
Confidence 567777875 9999977765421 1456788887666567887544
No 175
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=85.18 E-value=1.8 Score=43.31 Aligned_cols=86 Identities=14% Similarity=0.101 Sum_probs=53.5
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcc
Q 012553 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (461)
Q Consensus 316 Agll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~ 395 (461)
++.+++..+. +....++.|+|+|..|..++..+... .+ .++++++|+. ..+ .....+.|..
T Consensus 116 ~s~laa~~la--~~~~~~v~iIGaG~~a~~~a~al~~~----~~------~~~V~V~~r~----~~~---a~~la~~~~~ 176 (350)
T 1x7d_A 116 TSLMAAQALA--RPNARKMALIGNGAQSEFQALAFHKH----LG------IEEIVAYDTD----PLA---TAKLIANLKE 176 (350)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSTTHHHHHHHHHHH----SC------CCEEEEECSS----HHH---HHHHHHHHTT
T ss_pred HHHHHHHHhc--cccCCeEEEECCcHHHHHHHHHHHHh----CC------CcEEEEEcCC----HHH---HHHHHHHHHh
Confidence 3455555553 24567999999999999988776543 13 3678888873 111 2223333321
Q ss_pred c----cCCCCCHHHhhcccCCcEEEeccCCC
Q 012553 396 E----HEPVNNLLDAVKVIKPTILIGSSGVG 422 (461)
Q Consensus 396 ~----~~~~~~L~eaV~~vkptvLIG~S~~~ 422 (461)
. .....++.|+++. +|++|-++..+
T Consensus 177 ~~g~~~~~~~~~~eav~~--aDiVi~aTps~ 205 (350)
T 1x7d_A 177 YSGLTIRRASSVAEAVKG--VDIITTVTADK 205 (350)
T ss_dssp CTTCEEEECSSHHHHHTT--CSEEEECCCCS
T ss_pred ccCceEEEeCCHHHHHhc--CCEEEEeccCC
Confidence 0 1123689999987 89999766543
No 176
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=85.17 E-value=0.79 Score=46.09 Aligned_cols=110 Identities=14% Similarity=0.256 Sum_probs=66.5
Q ss_pred ccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccc-cCCCCCHHHhh
Q 012553 330 AEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAV 407 (461)
Q Consensus 330 ~d~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~-~~~~~~L~eaV 407 (461)
...||.|+|| |..|..+|-.++. .|+ ...+.++|.+-=..++-.-.|.+. .|... ..-..++.+++
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~-----~g~-----~~evvLiDi~~~k~~g~a~DL~~~--~~~~~~i~~t~d~~~al 74 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAM-----MRL-----TPNLCLYDPFAVGLEGVAEEIRHC--GFEGLNLTFTSDIKEAL 74 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHH-----TTC-----CSCEEEECSCHHHHHHHHHHHHHH--CCTTCCCEEESCHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHh-----cCC-----CCEEEEEeCCchhHHHHHHhhhhC--cCCCCceEEcCCHHHHh
Confidence 4679999998 9999999966544 265 246999997310000000012221 12110 00125788999
Q ss_pred cccCCcEEEeccCCC---C-----------CCCHHHHHHHhcCCCCcE-EEEcCCCCchhh
Q 012553 408 KVIKPTILIGSSGVG---R-----------TFTKEVIEAMASFNEVVF-QALLWLIRKFNF 453 (461)
Q Consensus 408 ~~vkptvLIG~S~~~---g-----------~Ft~evv~~Ma~~~erPI-IF~Lsnp~~~~~ 453 (461)
++ +|++|=+.+.+ | ..-+++++.+++++..-+ |+-.|||-+.+-
T Consensus 75 ~d--ADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNPvd~~t 133 (343)
T 3fi9_A 75 TD--AKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPADITG 133 (343)
T ss_dssp TT--EEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSSHHHHH
T ss_pred CC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCchHHHH
Confidence 98 89988544433 2 133567777888888885 889999987653
No 177
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=85.14 E-value=2.7 Score=39.93 Aligned_cols=105 Identities=11% Similarity=0.122 Sum_probs=62.3
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChh----hhhhcc-ccCCCCC
Q 012553 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF----KKPWAH-EHEPVNN 402 (461)
Q Consensus 329 l~d~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~----k~~fA~-~~~~~~~ 402 (461)
....+|+|.|| |-.|..+++.|++. |. .-+++.+|+...-. ....+... ...+.. +.....+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~-----g~-----~~~v~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~Dl~d~~~ 89 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQS-----YE-----TYKIINFDALTYSG--NLNNVKSIQDHPNYYFVKGEIQNGEL 89 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHH-----CT-----TEEEEEEECCCTTC--CGGGGTTTTTCTTEEEEECCTTCHHH
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhh-----CC-----CcEEEEEecccccc--chhhhhhhccCCCeEEEEcCCCCHHH
Confidence 45679999999 99999999988763 52 24677777653211 10111110 111111 1122245
Q ss_pred HHHhhcccCCcEEEeccCCCCCC----------------CHHHHHHHhcCCCCcEEEEc
Q 012553 403 LLDAVKVIKPTILIGSSGVGRTF----------------TKEVIEAMASFNEVVFQALL 445 (461)
Q Consensus 403 L~eaV~~vkptvLIG~S~~~g~F----------------t~evv~~Ma~~~erPIIF~L 445 (461)
+.++++..++|++|=+.+....- |..+++++.+..-+-+||.=
T Consensus 90 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~S 148 (346)
T 4egb_A 90 LEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVS 148 (346)
T ss_dssp HHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEE
T ss_pred HHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 88888888899999877654211 35678888776656688753
No 178
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=85.06 E-value=0.29 Score=43.06 Aligned_cols=36 Identities=22% Similarity=0.294 Sum_probs=27.9
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 329 l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
+.+.+|+|+|+|..|..+|+.+... .| .+++++|++
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~----~g-------~~V~vid~~ 72 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRAR----YG-------KISLGIEIR 72 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHH----HC-------SCEEEEESC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhc----cC-------CeEEEEECC
Confidence 5567899999999999999988542 04 368888874
No 179
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=84.98 E-value=4.4 Score=40.38 Aligned_cols=65 Identities=20% Similarity=0.194 Sum_probs=46.7
Q ss_pred CCceeccCCC---chhHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHHh
Q 012553 299 THLVFNDDIQ---GTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQ 357 (461)
Q Consensus 299 ~~~~FnDDiQ---GTaaV~LAgll~Alk~------------------~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~ 357 (461)
.|+|.|---- .+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+...
T Consensus 112 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~l~g~tvgIIGlG~IG~~vA~~l~~~---- 187 (335)
T 2g76_A 112 GILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQSF---- 187 (335)
T ss_dssp TCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCCTTCEEEEECCSHHHHHHHHHHHTT----
T ss_pred CeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccCCCCcCCCcCEEEEEeECHHHHHHHHHHHHC----
Confidence 5666665322 2444467777777664 25679999999999999999999987532
Q ss_pred cCCChhhccceEEEEcCC
Q 012553 358 TKAPVEETRKKICLVDSK 375 (461)
Q Consensus 358 ~Gls~eeA~~~i~lvDs~ 375 (461)
|+ +++.+|+.
T Consensus 188 -G~-------~V~~~d~~ 197 (335)
T 2g76_A 188 -GM-------KTIGYDPI 197 (335)
T ss_dssp -TC-------EEEEECSS
T ss_pred -CC-------EEEEECCC
Confidence 53 68888864
No 180
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=84.82 E-value=0.26 Score=48.76 Aligned_cols=33 Identities=27% Similarity=0.338 Sum_probs=26.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
-.||.|+|+|..|.+||..++.+ |. +++++|.+
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~-----G~-------~V~l~d~~ 38 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSC
T ss_pred CceEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 36899999999999999998763 64 57888864
No 181
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=84.42 E-value=4.8 Score=38.90 Aligned_cols=34 Identities=26% Similarity=0.362 Sum_probs=27.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
..||.|+|+|..|.++|..+... |. ++++++|+.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~-----G~------~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQA-----GA------IDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH-----SC------CEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHC-----CC------CeEEEEcCC
Confidence 36899999999999999998764 52 478888873
No 182
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=84.33 E-value=0.38 Score=48.32 Aligned_cols=108 Identities=12% Similarity=0.106 Sum_probs=67.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcccc--CCCCCHHHhhc
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVK 408 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~--~~~~~L~eaV~ 408 (461)
..||.|+|||..|.++|..++.. |+ ...+.++|..-=..++-...|.+. ..|.... ....++.+ ++
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~-----g~-----~~ev~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~t~d~~~-~~ 88 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMK-----DL-----ADEVALVDVMEDKLKGEMMDLEHG-SLFLHTAKIVSGKDYSV-SA 88 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHH-----CC-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSCCSEEEEESSSCS-CS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECCHHHHHHHHHHhhhh-hhcccCCeEEEcCCHHH-hC
Confidence 47999999999999999988753 55 247999997310000000002111 1232211 01134544 66
Q ss_pred ccCCcEEEeccCC---CCC-----------CCHHHHHHHhcCCCCcEEEEcCCCCchh
Q 012553 409 VIKPTILIGSSGV---GRT-----------FTKEVIEAMASFNEVVFQALLWLIRKFN 452 (461)
Q Consensus 409 ~vkptvLIG~S~~---~g~-----------Ft~evv~~Ma~~~erPIIF~Lsnp~~~~ 452 (461)
+ +|++|=+.+. +|- +-+++++.+.+++...+|+-.|||-+.+
T Consensus 89 d--aDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNPvdi~ 144 (330)
T 3ldh_A 89 G--SKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPELGTDK 144 (330)
T ss_dssp S--CSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHH
T ss_pred C--CCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCccHHH
Confidence 6 8998833333 231 2356778888999999999999998865
No 183
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=84.26 E-value=0.88 Score=43.30 Aligned_cols=32 Identities=19% Similarity=0.300 Sum_probs=26.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.||.|+|+|..|.++|..+... |. +++++|+.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~-----G~-------~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA-----GY-------LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 5899999999999999988753 53 68888864
No 184
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=84.23 E-value=1.7 Score=41.15 Aligned_cols=90 Identities=12% Similarity=0.130 Sum_probs=51.1
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhccc
Q 012553 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (461)
Q Consensus 332 ~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~v 410 (461)
.||.|+|+ |..|.++|..+... |. +++++|+.- +.+...++ + .-...++.++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~-----g~-------~V~~~~r~~-------~~~~~~~~-~---g~~~~~~~~~~~~- 67 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDS-----AH-------HLAAIEIAP-------EGRDRLQG-M---GIPLTDGDGWIDE- 67 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHS-----SS-------EEEEECCSH-------HHHHHHHH-T---TCCCCCSSGGGGT-
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-----CC-------EEEEEECCH-------HHHHHHHh-c---CCCcCCHHHHhcC-
Confidence 48999999 99999999988642 52 688888631 11111111 0 0011245566664
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHhcC-CCCcEEEEcCCC
Q 012553 411 KPTILIGSSGVGRTFTKEVIEAMASF-NEVVFQALLWLI 448 (461)
Q Consensus 411 kptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIF~Lsnp 448 (461)
+|++|= +..+.. .+++++.+.+. .+..||.-+|+.
T Consensus 68 -aDvVi~-av~~~~-~~~v~~~l~~~l~~~~ivv~~s~~ 103 (286)
T 3c24_A 68 -ADVVVL-ALPDNI-IEKVAEDIVPRVRPGTIVLILDAA 103 (286)
T ss_dssp -CSEEEE-CSCHHH-HHHHHHHHGGGSCTTCEEEESCSH
T ss_pred -CCEEEE-cCCchH-HHHHHHHHHHhCCCCCEEEECCCC
Confidence 777763 322322 56777766553 234455556654
No 185
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=84.22 E-value=2.9 Score=41.35 Aligned_cols=66 Identities=15% Similarity=0.073 Sum_probs=47.1
Q ss_pred CCCceeccCC----CchhHHHHHHHHHHHHH----------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHHh
Q 012553 298 TTHLVFNDDI----QGTASVVLAGVVAALKL----------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQ 357 (461)
Q Consensus 298 ~~~~~FnDDi----QGTaaV~LAgll~Alk~----------------~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~ 357 (461)
..+++.|--- +..|=-+++.+|+..|- .+..+.+.+|.|+|.|..|..+|+.+...
T Consensus 86 ~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIiG~G~IG~~vA~~l~~~---- 161 (315)
T 3pp8_A 86 ASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTREEFSVGIMGAGVLGAKVAESLQAW---- 161 (315)
T ss_dssp TTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCCEEEECCSHHHHHHHHHHHTT----
T ss_pred CCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCCCCCCcCCCEEEEEeeCHHHHHHHHHHHHC----
Confidence 4566665321 34455678888877763 25678999999999999999999988542
Q ss_pred cCCChhhccceEEEEcCC
Q 012553 358 TKAPVEETRKKICLVDSK 375 (461)
Q Consensus 358 ~Gls~eeA~~~i~lvDs~ 375 (461)
|+ +++.+|+.
T Consensus 162 -G~-------~V~~~dr~ 171 (315)
T 3pp8_A 162 -GF-------PLRCWSRS 171 (315)
T ss_dssp -TC-------CEEEEESS
T ss_pred -CC-------EEEEEcCC
Confidence 64 67888864
No 186
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=84.20 E-value=0.81 Score=45.76 Aligned_cols=38 Identities=26% Similarity=0.418 Sum_probs=33.2
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 327 ~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
++|++.+|+|+|+|..|..||+.|+.+ |+ ++|.++|.+
T Consensus 32 ~~L~~~~VlivG~GGlG~~ia~~La~~-----Gv------g~itlvD~d 69 (346)
T 1y8q_A 32 KRLRASRVLLVGLKGLGAEIAKNLILA-----GV------KGLTMLDHE 69 (346)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCC
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEECC
Confidence 367789999999999999999999876 64 699999976
No 187
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=83.78 E-value=0.87 Score=44.28 Aligned_cols=34 Identities=18% Similarity=0.300 Sum_probs=27.3
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
...||.|+|+|..|.++|..+... |. +++++|+.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 63 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEA-----GY-------ALQVWNRT 63 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 457999999999999999988753 53 57777763
No 188
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=83.71 E-value=1.2 Score=42.28 Aligned_cols=32 Identities=19% Similarity=0.436 Sum_probs=25.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.||.|+|+|..|.++|..+... |. +++++|+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA-----GC-------SVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----CC-------eEEEEcCC
Confidence 5899999999999999988753 52 67777763
No 189
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=83.68 E-value=0.96 Score=43.38 Aligned_cols=32 Identities=22% Similarity=0.306 Sum_probs=25.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.||+|+|||.||+..|-.|.. .|+ ++.++|+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~-----~G~-------~v~v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRK-----HGI-------KVTIYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEecC
Confidence 489999999999999988865 375 46666653
No 190
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=83.66 E-value=1.1 Score=41.62 Aligned_cols=95 Identities=12% Similarity=0.157 Sum_probs=56.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhccc
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~v 410 (461)
..||+|.|||-.|..+++.|+.. |. +++.++++. +.+.+.-..+.-+.....++.+++++
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~-----g~-------~V~~~~r~~-------~~~~~~~~~~~~Dl~d~~~~~~~~~~- 62 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQ-----GH-------EVTGLRRSA-------QPMPAGVQTLIADVTRPDTLASIVHL- 62 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEECTT-------SCCCTTCCEEECCTTCGGGCTTGGGG-
T ss_pred CCcEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCCc-------cccccCCceEEccCCChHHHHHhhcC-
Confidence 46899999999999998888652 52 677777641 11211111111122222346666664
Q ss_pred CCcEEEeccCCCC-----------CCCHHHHHHHhcCCCCcEEEEc
Q 012553 411 KPTILIGSSGVGR-----------TFTKEVIEAMASFNEVVFQALL 445 (461)
Q Consensus 411 kptvLIG~S~~~g-----------~Ft~evv~~Ma~~~erPIIF~L 445 (461)
++|++|=+.+... ..|..+++++.+..-+.+||.=
T Consensus 63 ~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~S 108 (286)
T 3gpi_A 63 RPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVS 108 (286)
T ss_dssp CCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEc
Confidence 6999996654311 1256778888765556677753
No 191
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=83.64 E-value=1.2 Score=46.79 Aligned_cols=32 Identities=22% Similarity=0.345 Sum_probs=26.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.||.|+|+|..|.+||..++.+ |. +++++|.+
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~a-----G~-------~V~l~D~~ 86 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLA-----GI-------ETFLVVRN 86 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEECc
Confidence 6899999999999999988763 64 67788763
No 192
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=83.56 E-value=0.61 Score=50.60 Aligned_cols=38 Identities=26% Similarity=0.439 Sum_probs=33.4
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 327 ~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.+|++.||+|+|||..|..+|+.|+.+ |+ .+|.++|.+
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La~a-----GV------G~ItLvD~D 360 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 360 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHTT-----TC------CEEEEECCS
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEECCC
Confidence 477899999999999999999998764 64 699999976
No 193
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=83.49 E-value=4.8 Score=40.45 Aligned_cols=93 Identities=10% Similarity=0.020 Sum_probs=54.6
Q ss_pred CCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHH
Q 012553 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (461)
Q Consensus 326 g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 405 (461)
|..|.+.+|.|+|.|..|..+|+.+... |+ +++.+|+.. ... ..... ......+|.|
T Consensus 155 ~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d~~~--~~~------~~~~~---g~~~~~~l~e 211 (352)
T 3gg9_A 155 GRVLKGQTLGIFGYGKIGQLVAGYGRAF-----GM-------NVLVWGREN--SKE------RARAD---GFAVAESKDA 211 (352)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSHH--HHH------HHHHT---TCEECSSHHH
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHhC-----CC-------EEEEECCCC--CHH------HHHhc---CceEeCCHHH
Confidence 5678999999999999999999988542 64 688888742 000 00000 0011235666
Q ss_pred hhcccCCcEEEecc----CCCCCCCHHHHHHHhcCCCCcEEEEcC
Q 012553 406 AVKVIKPTILIGSS----GVGRTFTKEVIEAMASFNEVVFQALLW 446 (461)
Q Consensus 406 aV~~vkptvLIG~S----~~~g~Ft~evv~~Ma~~~erPIIF~Ls 446 (461)
+++. .|+++=.- ...+.++++.++.|.+ ..++.=.|
T Consensus 212 ll~~--aDiV~l~~Plt~~t~~li~~~~l~~mk~---gailIN~a 251 (352)
T 3gg9_A 212 LFEQ--SDVLSVHLRLNDETRSIITVADLTRMKP---TALFVNTS 251 (352)
T ss_dssp HHHH--CSEEEECCCCSTTTTTCBCHHHHTTSCT---TCEEEECS
T ss_pred HHhh--CCEEEEeccCcHHHHHhhCHHHHhhCCC---CcEEEECC
Confidence 6665 66665321 1234666666666643 44554444
No 194
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=83.44 E-value=3 Score=39.05 Aligned_cols=34 Identities=24% Similarity=0.284 Sum_probs=26.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.||.|+|+|..|..+|..+... |. ..+++++|++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~-----g~-----~~~V~~~d~~ 35 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRS-----GF-----KGKIYGYDIN 35 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-----TC-----CSEEEEECSC
T ss_pred cEEEEEecCHHHHHHHHHHHhc-----CC-----CcEEEEEeCC
Confidence 3799999999999999988642 53 1368888874
No 195
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=83.35 E-value=1.4 Score=39.13 Aligned_cols=97 Identities=11% Similarity=0.108 Sum_probs=58.2
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhccc
Q 012553 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (461)
Q Consensus 332 ~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~v 410 (461)
.+|+|.|| |-.|..+++.|++. | .++++++++. ++.+.+...-..+.-+.....++.+++++
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~- 67 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNR-----G-------FEVTAVVRHP----EKIKIENEHLKVKKADVSSLDEVCEVCKG- 67 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTT-----T-------CEEEEECSCG----GGCCCCCTTEEEECCCTTCHHHHHHHHTT-
T ss_pred CEEEEEcCCchHHHHHHHHHHHC-----C-------CEEEEEEcCc----ccchhccCceEEEEecCCCHHHHHHHhcC-
Confidence 58999996 88888888877642 4 3788888852 11111211111111122223457888886
Q ss_pred CCcEEEeccCCCC----------CCCHHHHHHHhcCCCCcEEEEcC
Q 012553 411 KPTILIGSSGVGR----------TFTKEVIEAMASFNEVVFQALLW 446 (461)
Q Consensus 411 kptvLIG~S~~~g----------~Ft~evv~~Ma~~~erPIIF~Ls 446 (461)
+|++|=+.+... ..+..+++++.+..-+.+||.=|
T Consensus 68 -~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss 112 (227)
T 3dhn_A 68 -ADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGG 112 (227)
T ss_dssp -CSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred -CCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 899997765431 12566888888776667777543
No 196
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=83.29 E-value=1.4 Score=42.26 Aligned_cols=32 Identities=22% Similarity=0.366 Sum_probs=25.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.||.|+|+|..|..+|..+... |. +++++|+.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~-----g~-------~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM-----GH-------TVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHhC-----CC-------EEEEEeCC
Confidence 6899999999999999988642 53 57888763
No 197
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=83.17 E-value=1.8 Score=40.61 Aligned_cols=30 Identities=20% Similarity=0.324 Sum_probs=24.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEc
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 373 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvD 373 (461)
.||.|+|+|..|..+|..+... |. +++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARA-----GH-------QLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHT-----TC-------EEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhC-----CC-------EEEEEc
Confidence 4899999999999999988642 53 577776
No 198
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=83.12 E-value=7.2 Score=39.04 Aligned_cols=84 Identities=15% Similarity=0.124 Sum_probs=53.2
Q ss_pred eeeecCCcccHHHHHHHHcCCCceeccCCC---chhHHHHHHHHHHHHHh------------------------C-CCcc
Q 012553 279 IQFEDFANHNAFELLAKYGTTHLVFNDDIQ---GTASVVLAGVVAALKLI------------------------G-GTLA 330 (461)
Q Consensus 279 Iq~EDf~~~~af~iL~ryr~~~~~FnDDiQ---GTaaV~LAgll~Alk~~------------------------g-~~l~ 330 (461)
|+.--.+..| ..+..--+..|.|.|---- .+|=-+++.+|+..|-. | ..|.
T Consensus 89 I~~~~~G~d~-id~~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l~ 167 (347)
T 1mx3_A 89 IVRIGSGFDN-IDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIR 167 (347)
T ss_dssp EEESSSCCTT-BCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCCT
T ss_pred EEEcccccCc-ccHHHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCcccccccccccccCccCCC
Confidence 5544444443 1222222345666664322 34444678888776621 2 4688
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+.
T Consensus 168 g~tvGIIG~G~IG~~vA~~l~~-----~G~-------~V~~~d~~ 200 (347)
T 1mx3_A 168 GETLGIIGLGRVGQAVALRAKA-----FGF-------NVLFYDPY 200 (347)
T ss_dssp TCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEECTT
T ss_pred CCEEEEEeECHHHHHHHHHHHH-----CCC-------EEEEECCC
Confidence 9999999999999999998854 254 68888864
No 199
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=83.09 E-value=1.6 Score=45.29 Aligned_cols=97 Identities=16% Similarity=0.081 Sum_probs=59.5
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhc-----cccCCCCCHHHhh
Q 012553 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-----HEHEPVNNLLDAV 407 (461)
Q Consensus 333 riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA-----~~~~~~~~L~eaV 407 (461)
||.|+|+|..|..+|..+... |. +++++|+.. + ......+.+- .......++.|++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~----~---~~~~l~~~~g~~~~~~~i~~~~~~~e~v 63 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEK-----GF-------KVAVFNRTY----S---KSEEFMKANASAPFAGNLKAFETMEAFA 63 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSH----H---HHHHHHHHTTTSTTGGGEEECSCHHHHH
T ss_pred EEEEEChHHHHHHHHHHHHHC-----CC-------EEEEEeCCH----H---HHHHHHHhcCCCCCCCCeEEECCHHHHH
Confidence 799999999999999988653 53 578888631 1 1111111100 0011235788888
Q ss_pred ccc-CCcEEEeccCCCCCCCHHHHHHHhcCC-CCcEEEEcCCCC
Q 012553 408 KVI-KPTILIGSSGVGRTFTKEVIEAMASFN-EVVFQALLWLIR 449 (461)
Q Consensus 408 ~~v-kptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIF~Lsnp~ 449 (461)
+.. ++|++| ++...+...+++++.+.+.- +..||.-++|..
T Consensus 64 ~~l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iIId~sng~ 106 (478)
T 1pgj_A 64 ASLKKPRKAL-ILVQAGAATDSTIEQLKKVFEKGDILVDTGNAH 106 (478)
T ss_dssp HHBCSSCEEE-ECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCC
T ss_pred hcccCCCEEE-EecCChHHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 743 488887 44434345677887776533 355778888865
No 200
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=83.07 E-value=0.39 Score=47.97 Aligned_cols=114 Identities=15% Similarity=0.043 Sum_probs=70.4
Q ss_pred ceEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC---ccccCCcCCCChhhhhhccccCCCCCHHHhh
Q 012553 332 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG---LIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 407 (461)
Q Consensus 332 ~riv~~G-AGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G---Li~~~R~~~L~~~k~~fA~~~~~~~~L~eaV 407 (461)
.||+|.| ||..|..+|-+|+. .|+-.++-.-.+.|+|... .+.-...| |.+..-+|.++.....++.+++
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~-----~~~~~e~~~~~l~L~Di~~~~~~~~g~a~D-L~~~~~~~~~~~~~~~~~~~~~ 77 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGN-----GSVFGKDQPIILVLLDITPMMGVLDGVLME-LQDCALPLLKDVIATDKEEIAF 77 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHHHH-HHHTCCTTEEEEEEESCHHHHT
T ss_pred eEEEEECCCCHHHHHHHHHHHh-----CCCccccCCCEEEEEeCCCccccchhhHhh-hHhhhhcccCCEEEcCCcHHHh
Confidence 5899999 79999999988864 2441111111389999852 11111111 3222223333222235688999
Q ss_pred cccCCcEEEeccCCC---C-----------CCCHHHHHHHhcCCCCc-EEEEcCCCCchhh
Q 012553 408 KVIKPTILIGSSGVG---R-----------TFTKEVIEAMASFNEVV-FQALLWLIRKFNF 453 (461)
Q Consensus 408 ~~vkptvLIG~S~~~---g-----------~Ft~evv~~Ma~~~erP-IIF~Lsnp~~~~~ 453 (461)
++ .|++|=+.+.+ | ...+++++++.+++.+- +|+-.|||-+.+-
T Consensus 78 ~d--aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPvd~~t 136 (333)
T 5mdh_A 78 KD--LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPANTNC 136 (333)
T ss_dssp TT--CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH
T ss_pred CC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCchHHHH
Confidence 98 89988555433 2 13467888888888776 4999999988764
No 201
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=82.61 E-value=5.9 Score=39.41 Aligned_cols=83 Identities=17% Similarity=0.159 Sum_probs=51.6
Q ss_pred CCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHH
Q 012553 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (461)
Q Consensus 326 g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 405 (461)
|..|.+.++.|+|.|..|..+|+.+... |+ +++.+|+.. + + ......+ ...+|.|
T Consensus 136 ~~~l~g~tvGIiG~G~IG~~va~~~~~f-----g~-------~v~~~d~~~-----~-~---~~~~~~~----~~~~l~e 190 (334)
T 3kb6_A 136 ARELNRLTLGVIGTGRIGSRVAMYGLAF-----GM-------KVLCYDVVK-----R-E---DLKEKGC----VYTSLDE 190 (334)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSC-----C-H---HHHHTTC----EECCHHH
T ss_pred cceecCcEEEEECcchHHHHHHHhhccc-----Cc-------eeeecCCcc-----c-h---hhhhcCc----eecCHHH
Confidence 4678899999999999999999987543 64 677777631 1 0 1111111 1245677
Q ss_pred hhcccCCcEEEec----cCCCCCCCHHHHHHHhc
Q 012553 406 AVKVIKPTILIGS----SGVGRTFTKEVIEAMAS 435 (461)
Q Consensus 406 aV~~vkptvLIG~----S~~~g~Ft~evv~~Ma~ 435 (461)
.++. .|+++=. ...-+.|+++.++.|.+
T Consensus 191 ll~~--sDivslh~Plt~~T~~li~~~~l~~mk~ 222 (334)
T 3kb6_A 191 LLKE--SDVISLHVPYTKETHHMINEERISLMKD 222 (334)
T ss_dssp HHHH--CSEEEECCCCCTTTTTCBCHHHHHHSCT
T ss_pred HHhh--CCEEEEcCCCChhhccCcCHHHHhhcCC
Confidence 7766 6666532 12235677777777754
No 202
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=82.60 E-value=1.2 Score=42.95 Aligned_cols=36 Identities=17% Similarity=0.300 Sum_probs=28.2
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 328 ~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.+...||.|+|+|..|.++|..+... |. +++++|+.
T Consensus 6 ~~~~~~IgiIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 41 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGTIMAQVLLKQ-----GK-------RVAIWNRS 41 (306)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 34567999999999999999998753 53 57777764
No 203
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=82.34 E-value=1.8 Score=42.17 Aligned_cols=33 Identities=27% Similarity=0.397 Sum_probs=26.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.||.|+|+|..|.++|..+... |. .+++++|+.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~-----G~------~~V~~~dr~ 57 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR-----NA------ARLAAYDLR 57 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECGG
T ss_pred CeEEEECccHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 5899999999999999988653 51 368888875
No 204
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=82.31 E-value=2.3 Score=44.67 Aligned_cols=98 Identities=12% Similarity=0.065 Sum_probs=62.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcccc--CCCCCHHHhhcc
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVKV 409 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~--~~~~~L~eaV~~ 409 (461)
.+|.|+|+|..|.++|..+... |. +++++|+.- +..+...+.-+... ....++.|+++.
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~-----G~-------~V~v~dr~~-------~~~~~l~~~g~~g~~i~~~~s~~e~v~~ 65 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRTV-------SKVDDFLANEAKGTKVVGAQSLKEMVSK 65 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSST-------HHHHHHHHTTTTTSSCEECSSHHHHHHT
T ss_pred CEEEEEChhHHHHHHHHHHHHC-----CC-------EEEEEeCCH-------HHHHHHHhcccCCCceeccCCHHHHHhh
Confidence 5899999999999999988753 53 577777631 11111111111110 113678998875
Q ss_pred c-CCcEEEeccCCCCCCCHHHHHHHhcCC-CCcEEEEcCCCC
Q 012553 410 I-KPTILIGSSGVGRTFTKEVIEAMASFN-EVVFQALLWLIR 449 (461)
Q Consensus 410 v-kptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIF~Lsnp~ 449 (461)
+ +||++| ++.+.+..++++++.+.++- +..||.-.||..
T Consensus 66 l~~aDvVi-l~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~ 106 (484)
T 4gwg_A 66 LKKPRRII-LLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSE 106 (484)
T ss_dssp BCSSCEEE-ECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EecCChHHHHHHHHHHHHhcCCCCEEEEcCCCC
Confidence 3 488777 44444456778888887643 567888888865
No 205
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=82.23 E-value=3.5 Score=40.26 Aligned_cols=35 Identities=23% Similarity=0.257 Sum_probs=28.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
-.||.|+|+|..|.++|..+... |. ..+++++|++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~-----G~-----~~~V~~~dr~ 67 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRS-----GF-----KGKIYGYDIN 67 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHT-----TC-----CSEEEEECSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-----CC-----CCEEEEEECC
Confidence 37999999999999999988753 64 2478888874
No 206
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=82.15 E-value=1.6 Score=41.37 Aligned_cols=32 Identities=19% Similarity=0.293 Sum_probs=25.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.||.|+|+|..|.++|..+... |. +++++|+.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRA-----GF-------DVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHH-----TC-------CEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHHC-----CC-------eEEEEcCC
Confidence 3799999999999999998764 53 57777763
No 207
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=81.84 E-value=2.5 Score=43.65 Aligned_cols=99 Identities=11% Similarity=0.032 Sum_probs=61.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcc-ccCCCCCHHHhhcc
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 409 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~ 409 (461)
..+|.|+|+|..|..+|..+... |. +++++|+.- +......+.+.. ......++.|+++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~-----G~-------~V~v~dr~~-------~~~~~l~~~~~~~gi~~~~s~~e~v~~ 65 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESR-----GY-------TVAIYNRTT-------SKTEEVFKEHQDKNLVFTKTLEEFVGS 65 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSH-------HHHHHHHHHTTTSCEEECSSHHHHHHT
T ss_pred CCcEEEEeeHHHHHHHHHHHHhC-----CC-------EEEEEcCCH-------HHHHHHHHhCcCCCeEEeCCHHHHHhh
Confidence 35899999999999999988653 53 577777631 112222221100 01123578888875
Q ss_pred c-CCcEEEeccCCCCCCCHHHHHHHhcCC-CCcEEEEcCCCC
Q 012553 410 I-KPTILIGSSGVGRTFTKEVIEAMASFN-EVVFQALLWLIR 449 (461)
Q Consensus 410 v-kptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIF~Lsnp~ 449 (461)
. ++|++| ++...+...+++++.+.+.- +..||.-++|..
T Consensus 66 l~~aDvVi-lavp~~~~v~~vl~~l~~~l~~g~iiId~s~~~ 106 (474)
T 2iz1_A 66 LEKPRRIM-LMVQAGAATDATIKSLLPLLDIGDILIDGGNTH 106 (474)
T ss_dssp BCSSCEEE-ECCCTTHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EEccCchHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 3 488877 44444456778888776544 345777888864
No 208
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=81.68 E-value=1.2 Score=40.69 Aligned_cols=96 Identities=10% Similarity=0.011 Sum_probs=50.0
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHh
Q 012553 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (461)
Q Consensus 327 ~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~ea 406 (461)
++-...||.|+|+|..|..+|..+... |. +++++|++- ++ .. .++...-...++.++
T Consensus 24 ~~~~~~~I~iiG~G~~G~~la~~l~~~-----g~-------~V~~~~r~~----~~---~~----~~~~~g~~~~~~~~~ 80 (215)
T 2vns_A 24 VPDEAPKVGILGSGDFARSLATRLVGS-----GF-------KVVVGSRNP----KR---TA----RLFPSAAQVTFQEEA 80 (215)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSH----HH---HH----HHSBTTSEEEEHHHH
T ss_pred CCCCCCEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEEeCCH----HH---HH----HHHHcCCceecHHHH
Confidence 333457899999999999999988642 53 578887641 10 11 111110001256676
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcCCCCc
Q 012553 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLWLIRK 450 (461)
Q Consensus 407 V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Lsnp~~ 450 (461)
++. +|++|=+.. +. ..+++++ ++...+.-+|.-++|+..
T Consensus 81 ~~~--~DvVi~av~-~~-~~~~v~~-l~~~~~~~~vv~~s~g~~ 119 (215)
T 2vns_A 81 VSS--PEVIFVAVF-RE-HYSSLCS-LSDQLAGKILVDVSNPTE 119 (215)
T ss_dssp TTS--CSEEEECSC-GG-GSGGGGG-GHHHHTTCEEEECCCCCH
T ss_pred HhC--CCEEEECCC-hH-HHHHHHH-HHHhcCCCEEEEeCCCcc
Confidence 664 677663322 22 2344443 322223457777777654
No 209
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=81.47 E-value=3.5 Score=39.58 Aligned_cols=32 Identities=22% Similarity=0.437 Sum_probs=25.6
Q ss_pred ceEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 332 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 332 ~riv~~G-AGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.||.|+| +|..|..+|..+... |. +++++|+.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~-----G~-------~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRAS-----GY-------PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTT-----TC-------CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 4899999 999999999988642 53 68888764
No 210
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=81.26 E-value=4.7 Score=40.02 Aligned_cols=122 Identities=13% Similarity=0.030 Sum_probs=72.0
Q ss_pred CCCceeccCC---CchhHHHHHHHHHHHHH--------------------hCCCcccceEEEeCcchHHHHHHHHHHHHH
Q 012553 298 TTHLVFNDDI---QGTASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEI 354 (461)
Q Consensus 298 ~~~~~FnDDi---QGTaaV~LAgll~Alk~--------------------~g~~l~d~riv~~GAGsAgiGiA~ll~~~m 354 (461)
..|+|.|--- +.+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|..+|+.+..
T Consensus 89 ~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~-- 166 (330)
T 4e5n_A 89 RGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAMADRLQG-- 166 (330)
T ss_dssp TTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHHHHHTTT--
T ss_pred cCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCHHHHHHHHHHHH--
Confidence 3555555422 23444567777776652 2456889999999999999999998753
Q ss_pred HHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhcccCCcEEEecc----CCCCCCCHHHH
Q 012553 355 SKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVI 430 (461)
Q Consensus 355 ~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkptvLIG~S----~~~g~Ft~evv 430 (461)
.|+ +++.+|+... .....+..-+ ...+|.|+++. .|+++=.- ...+.++++.+
T Consensus 167 ---~G~-------~V~~~d~~~~-------~~~~~~~~g~----~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l 223 (330)
T 4e5n_A 167 ---WGA-------TLQYHEAKAL-------DTQTEQRLGL----RQVACSELFAS--SDFILLALPLNADTLHLVNAELL 223 (330)
T ss_dssp ---SCC-------EEEEECSSCC-------CHHHHHHHTE----EECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHH
T ss_pred ---CCC-------EEEEECCCCC-------cHhHHHhcCc----eeCCHHHHHhh--CCEEEEcCCCCHHHHHHhCHHHH
Confidence 254 6888887531 0101110001 11357777776 67766432 12346777777
Q ss_pred HHHhcCCCCcEEEEcCC
Q 012553 431 EAMASFNEVVFQALLWL 447 (461)
Q Consensus 431 ~~Ma~~~erPIIF~Lsn 447 (461)
+.|.+ ..+|.=.|.
T Consensus 224 ~~mk~---gailIN~ar 237 (330)
T 4e5n_A 224 ALVRP---GALLVNPCR 237 (330)
T ss_dssp TTSCT---TEEEEECSC
T ss_pred hhCCC---CcEEEECCC
Confidence 77754 555555544
No 211
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=81.00 E-value=1.2 Score=41.64 Aligned_cols=34 Identities=12% Similarity=0.341 Sum_probs=27.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
..+|+|+|||.||+..|..+.. .|+ ++.++|+..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~-----~g~-------~v~vie~~~ 36 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRR-----SGL-------SYVILDAEA 36 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----SSC-------CEEEECCSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 4689999999999999998864 253 688999874
No 212
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=80.94 E-value=1.4 Score=40.37 Aligned_cols=32 Identities=25% Similarity=0.368 Sum_probs=26.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.+|+|+|||.||+..|..+... |. ++.++|+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 34 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRA-----RK-------NILLVDAG 34 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----CC-------CEEEEeCC
Confidence 5899999999999999988653 53 68899963
No 213
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=80.84 E-value=3.6 Score=40.38 Aligned_cols=100 Identities=16% Similarity=0.115 Sum_probs=59.3
Q ss_pred HHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcc-
Q 012553 317 GVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH- 395 (461)
Q Consensus 317 gll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~- 395 (461)
+.+++..+.. ....++.|+|+|..|-.+++.+... .+ .++++++|+. .++ .....+.|..
T Consensus 113 s~laa~~la~--~~~~~v~iIGaG~~a~~~~~al~~~----~~------~~~V~v~~r~----~~~---a~~la~~~~~~ 173 (322)
T 1omo_A 113 GGIAAKYLAR--KNSSVFGFIGCGTQAYFQLEALRRV----FD------IGEVKAYDVR----EKA---AKKFVSYCEDR 173 (322)
T ss_dssp HHHHHHHHSC--TTCCEEEEECCSHHHHHHHHHHHHH----SC------CCEEEEECSS----HHH---HHHHHHHHHHT
T ss_pred HHHHHHhccC--CCCCEEEEEcCcHHHHHHHHHHHHh----CC------ccEEEEECCC----HHH---HHHHHHHHHhc
Confidence 4455554432 3567999999999999988877653 12 3678888873 221 2223333321
Q ss_pred --ccCCCCCHHHhhcccCCcEEEeccCCC-CCCCHHHHHHHhcCCCCcEEEEc
Q 012553 396 --EHEPVNNLLDAVKVIKPTILIGSSGVG-RTFTKEVIEAMASFNEVVFQALL 445 (461)
Q Consensus 396 --~~~~~~~L~eaV~~vkptvLIG~S~~~-g~Ft~evv~~Ma~~~erPIIF~L 445 (461)
... ..++.|++ . .|++|-++..+ ..++.+++ ...-.|+.+
T Consensus 174 ~~~~~-~~~~~e~v-~--aDvVi~aTp~~~pv~~~~~l------~~G~~V~~i 216 (322)
T 1omo_A 174 GISAS-VQPAEEAS-R--CDVLVTTTPSRKPVVKAEWV------EEGTHINAI 216 (322)
T ss_dssp TCCEE-ECCHHHHT-S--SSEEEECCCCSSCCBCGGGC------CTTCEEEEC
T ss_pred CceEE-ECCHHHHh-C--CCEEEEeeCCCCceecHHHc------CCCeEEEEC
Confidence 112 46899999 5 89998765433 23443322 234577777
No 214
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=80.83 E-value=2.7 Score=40.50 Aligned_cols=36 Identities=17% Similarity=0.171 Sum_probs=28.4
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 328 ~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
+.+-.||.|+|+|..|.++|..+... |. +++++|+.
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 53 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKN-----GF-------KVTVWNRT 53 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred cccCCEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 34457999999999999999998763 53 67888873
No 215
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=80.79 E-value=1.3 Score=42.04 Aligned_cols=31 Identities=23% Similarity=0.382 Sum_probs=24.2
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 333 riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
-|+|+|||.||+..|..|.+. |+ ++.++|++
T Consensus 6 DViIVGaGpaGl~~A~~La~~-----G~-------~V~v~Er~ 36 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKY-----GL-------KTLMIEKR 36 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHC-----CC-------cEEEEeCC
Confidence 389999999999999888653 75 46677653
No 216
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=80.58 E-value=3.3 Score=39.35 Aligned_cols=102 Identities=16% Similarity=0.132 Sum_probs=60.2
Q ss_pred CCcccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCc---CCCChhhhhhc-cccCCCC
Q 012553 327 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRK---DSLQHFKKPWA-HEHEPVN 401 (461)
Q Consensus 327 ~~l~d~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~---~~L~~~k~~fA-~~~~~~~ 401 (461)
+++++.+|+|.|| |-.|..+++.|+. .| -+++++|+..- ... +.+. ...+. -+.....
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~---~~~~~~~~l~--~v~~~~~Dl~d~~ 78 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLP-----QG-------HEILVIDNFAT---GKREVLPPVA--GLSVIEGSVTDAG 78 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGG-----GT-------CEEEEEECCSS---SCGGGSCSCT--TEEEEECCTTCHH
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCCc---cchhhhhccC--CceEEEeeCCCHH
Confidence 4577889999998 8888888887754 24 36888887310 100 1110 11111 1112223
Q ss_pred CHHHhhcccCCcEEEeccCCCCC-------------CCHHHHHHHhcCCCCcEEEEc
Q 012553 402 NLLDAVKVIKPTILIGSSGVGRT-------------FTKEVIEAMASFNEVVFQALL 445 (461)
Q Consensus 402 ~L~eaV~~vkptvLIG~S~~~g~-------------Ft~evv~~Ma~~~erPIIF~L 445 (461)
++.++++.+++|++|=+.+.... -|..+++++.+..-+.|||.=
T Consensus 79 ~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~S 135 (330)
T 2pzm_A 79 LLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQ 135 (330)
T ss_dssp HHHHHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEE
T ss_pred HHHHHHhhcCCCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEec
Confidence 57777875569999988775432 034566777655556777753
No 217
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=80.47 E-value=1.1 Score=39.98 Aligned_cols=94 Identities=13% Similarity=0.105 Sum_probs=57.7
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChh-----hhhhc-cccCCCCCHH
Q 012553 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF-----KKPWA-HEHEPVNNLL 404 (461)
Q Consensus 332 ~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~-----k~~fA-~~~~~~~~L~ 404 (461)
.+|+|.|| |-.|..+++.|++. .|. ++++++++. + ..+... +..+. -+.....++.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~----~g~-------~V~~~~r~~----~--~~~~~~~~~~~~~~~~~~D~~d~~~~~ 68 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTY----TDM-------HITLYGRQL----K--TRIPPEIIDHERVTVIEGSFQNPGXLE 68 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHH----CCC-------EEEEEESSH----H--HHSCHHHHTSTTEEEEECCTTCHHHHH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhc----CCc-------eEEEEecCc----c--ccchhhccCCCceEEEECCCCCHHHHH
Confidence 35999996 88888898888732 352 688887741 1 012111 00111 1112224577
Q ss_pred HhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEE
Q 012553 405 DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQAL 444 (461)
Q Consensus 405 eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~ 444 (461)
++++. +|++|=+.+..+.-++.+++.|.+..-+-||+.
T Consensus 69 ~~~~~--~d~vv~~ag~~n~~~~~~~~~~~~~~~~~iv~i 106 (221)
T 3r6d_A 69 QAVTN--AEVVFVGAMESGSDMASIVKALSRXNIRRVIGV 106 (221)
T ss_dssp HHHTT--CSEEEESCCCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHcC--CCEEEEcCCCCChhHHHHHHHHHhcCCCeEEEE
Confidence 88875 899997776433227889999987665667775
No 218
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=80.45 E-value=1.4 Score=41.96 Aligned_cols=35 Identities=23% Similarity=0.433 Sum_probs=28.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
..+|+|+|||.||+..|..+.. .|. .++.++|+..
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~-----~g~------~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKD-----FGI------TDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC------CCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHH-----cCC------CcEEEEecCC
Confidence 4689999999999999998864 253 2799999874
No 219
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=80.44 E-value=0.54 Score=46.55 Aligned_cols=79 Identities=23% Similarity=0.330 Sum_probs=49.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcc----ccCCCCCHHHhh
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH----EHEPVNNLLDAV 407 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~----~~~~~~~L~eaV 407 (461)
.||+|+|||-.|-.+|+.|.+ ..++.++|... +.++.. ++++. +.....+|.+++
T Consensus 17 mkilvlGaG~vG~~~~~~L~~-------------~~~v~~~~~~~-------~~~~~~-~~~~~~~~~d~~d~~~l~~~~ 75 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD-------------EFDVYIGDVNN-------ENLEKV-KEFATPLKVDASNFDKLVEVM 75 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-------------TSEEEEEESCH-------HHHHHH-TTTSEEEECCTTCHHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHhc-------------CCCeEEEEcCH-------HHHHHH-hccCCcEEEecCCHHHHHHHH
Confidence 479999999999888877632 13577777531 112111 11221 222334688888
Q ss_pred cccCCcEEEeccCCCCCCCHHHHHHHhc
Q 012553 408 KVIKPTILIGSSGVGRTFTKEVIEAMAS 435 (461)
Q Consensus 408 ~~vkptvLIG~S~~~g~Ft~evv~~Ma~ 435 (461)
++ .|++|-+. |..+...++++-.+
T Consensus 76 ~~--~DvVi~~~--p~~~~~~v~~~~~~ 99 (365)
T 3abi_A 76 KE--FELVIGAL--PGFLGFKSIKAAIK 99 (365)
T ss_dssp TT--CSEEEECC--CGGGHHHHHHHHHH
T ss_pred hC--CCEEEEec--CCcccchHHHHHHh
Confidence 86 89998554 44578888887654
No 220
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=80.42 E-value=3.4 Score=38.52 Aligned_cols=31 Identities=16% Similarity=0.179 Sum_probs=25.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 333 riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
||.|+|+|..|..+|..+... |. +++++|+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR-----GH-------YLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHC-----CC-------EEEEEECC
Confidence 799999999999999988652 52 68888864
No 221
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=80.26 E-value=2.7 Score=43.52 Aligned_cols=98 Identities=11% Similarity=0.038 Sum_probs=59.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhh-hhc-cccCCCCCHHHhhcc
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWA-HEHEPVNNLLDAVKV 409 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~-~fA-~~~~~~~~L~eaV~~ 409 (461)
.+|.|+|+|..|..+|..|... |. +++++|+.. +.+....+ ... .......++.|+++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~-------~~~~~l~~~~~~g~gi~~~~~~~e~v~~ 63 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRTV-------SKVDDFLANEAKGTKVLGAHSLEEMVSK 63 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSST-------HHHHHHHHTTTTTSSCEECSSHHHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHC-----CC-------eEEEEeCCH-------HHHHHHHhccccCCCeEEeCCHHHHHhh
Confidence 4799999999999999988653 53 577887631 11111111 000 001113578888863
Q ss_pred c-CCcEEEeccCCCCCCCHHHHHHHhcCC-CCcEEEEcCCCC
Q 012553 410 I-KPTILIGSSGVGRTFTKEVIEAMASFN-EVVFQALLWLIR 449 (461)
Q Consensus 410 v-kptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIF~Lsnp~ 449 (461)
+ ++|++| ++...+...+++++.+.++- +..||.-++|..
T Consensus 64 l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~ 104 (482)
T 2pgd_A 64 LKKPRRII-LLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSE 104 (482)
T ss_dssp BCSSCEEE-ECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EeCCChHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 2 488877 44444446778888776543 345888888865
No 222
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=80.21 E-value=1.5 Score=40.77 Aligned_cols=34 Identities=18% Similarity=0.202 Sum_probs=27.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
..+|||+|||.||+..|..+.. .|. ++.++|+..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~ 40 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGM-----RQA-------SVKIIESLP 40 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEEcCC
Confidence 3589999999999999988765 253 688999863
No 223
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=80.14 E-value=1.5 Score=40.49 Aligned_cols=33 Identities=21% Similarity=0.243 Sum_probs=27.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
..+|+|+|||.||+..|..+... |. ++.++|+.
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARY-----ML-------KTLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESS
T ss_pred ccCEEEECccHHHHHHHHHHHHC-----CC-------cEEEEecc
Confidence 46899999999999999888652 53 58999997
No 224
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=80.01 E-value=1.3 Score=41.87 Aligned_cols=32 Identities=22% Similarity=0.287 Sum_probs=25.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.||.|+|+|..|..+|..+... |. +++++|+.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~ 36 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKE-----GV-------TVYAFDLM 36 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 5899999999999999988642 53 57888763
No 225
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=80.00 E-value=1.3 Score=42.74 Aligned_cols=33 Identities=18% Similarity=0.308 Sum_probs=25.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
.||.|+|||+-|..+|..|..+ | .+++++|+.-
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS-----G-------EDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT-----S-------CCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHC-----C-------CeEEEEEcCc
Confidence 5899999999999999888653 4 3677887753
No 226
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=79.93 E-value=4.6 Score=40.38 Aligned_cols=85 Identities=24% Similarity=0.346 Sum_probs=66.6
Q ss_pred hhHHHHHHHHHHHHHhCCCcccceEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCCh
Q 012553 310 TASVVLAGVVAALKLIGGTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 388 (461)
Q Consensus 310 TaaV~LAgll~Alk~~g~~l~d~riv~~GAG-sAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~ 388 (461)
-.-+|-.|++--|+-.+.+++..++||+|.+ -.|.-+|-+|.. .|. .+.+|.|+
T Consensus 158 ~~PcTp~gv~~lL~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~-----~~A-------TVTi~Hs~------------- 212 (303)
T 4b4u_A 158 YGSATPAGIMTILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQ-----ANA-------TVTICHSR------------- 212 (303)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHH-----TTC-------EEEEECTT-------------
T ss_pred ccCccHHHHHHHHHHHCCCCCCCEEEEEeccccccchHHHHHHh-----cCC-------EEEEecCC-------------
Confidence 3456778999999999999999999999976 467778877754 242 45555442
Q ss_pred hhhhhccccCCCCCHHHhhcccCCcEEEeccCCCCCCCHHHHHH
Q 012553 389 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEA 432 (461)
Q Consensus 389 ~k~~fA~~~~~~~~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~ 432 (461)
.++|.+.++. +|++|...+.++.++.++||.
T Consensus 213 -----------T~dl~~~~~~--ADIvV~A~G~p~~i~~d~vk~ 243 (303)
T 4b4u_A 213 -----------TQNLPELVKQ--ADIIVGAVGKAELIQKDWIKQ 243 (303)
T ss_dssp -----------CSSHHHHHHT--CSEEEECSCSTTCBCGGGSCT
T ss_pred -----------CCCHHHHhhc--CCeEEeccCCCCccccccccC
Confidence 1358888887 999999999999999999874
No 227
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=79.74 E-value=4.1 Score=38.60 Aligned_cols=97 Identities=14% Similarity=0.094 Sum_probs=58.0
Q ss_pred CCcccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHH
Q 012553 327 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (461)
Q Consensus 327 ~~l~d~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 405 (461)
++++..+|+|.|| |-.|..+++.|++. |. +++.+|+.. .. ..+.. +.-+.....++.+
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~-----G~-------~V~~~~r~~----~~-~~~~~----~~~Dl~d~~~~~~ 73 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRTQ-----GR-------TVRGFDLRP----SG-TGGEE----VVGSLEDGQALSD 73 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHHT-----TC-------CEEEEESSC----CS-SCCSE----EESCTTCHHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhC-----CC-------EEEEEeCCC----CC-CCccE----EecCcCCHHHHHH
Confidence 4577889999998 99999999888652 52 677777642 10 11111 1112122245778
Q ss_pred hhcccCCcEEEeccCCCCCC--------------CHHHHHHHhcCCCCcEEEEcC
Q 012553 406 AVKVIKPTILIGSSGVGRTF--------------TKEVIEAMASFNEVVFQALLW 446 (461)
Q Consensus 406 aV~~vkptvLIG~S~~~g~F--------------t~evv~~Ma~~~erPIIF~Ls 446 (461)
++++ +|++|=+.+....- |..+++++.+..-+.|||.=|
T Consensus 74 ~~~~--~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 74 AIMG--VSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS 126 (347)
T ss_dssp HHTT--CSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHhC--CCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 8885 99999877654211 345788888776678888644
No 228
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=79.74 E-value=1 Score=38.48 Aligned_cols=103 Identities=8% Similarity=0.034 Sum_probs=53.8
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChh---hhhhcc-ccCCCCCHHH
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF---KKPWAH-EHEPVNNLLD 405 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~---k~~fA~-~~~~~~~L~e 405 (461)
...+|+|+|+|..|..+++.|... | .++.++|++.- .+.+.+... ...+.. +......|.+
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~-----g-------~~V~vid~~~~---~~~~~~~~~~~~~~~~i~gd~~~~~~l~~ 66 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQR-----G-------QNVTVISNLPE---DDIKQLEQRLGDNADVIPGDSNDSSVLKK 66 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECCCH---HHHHHHHHHHCTTCEEEESCTTSHHHHHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEECCCh---HHHHHHHHhhcCCCeEEEcCCCCHHHHHH
Confidence 356899999999999999988652 4 36888887410 000001100 001111 1111134666
Q ss_pred h-hcccCCcEEEeccCCCCCCCHHHHHHHhcC-CCCcEEEEcCCCCc
Q 012553 406 A-VKVIKPTILIGSSGVGRTFTKEVIEAMASF-NEVVFQALLWLIRK 450 (461)
Q Consensus 406 a-V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIF~Lsnp~~ 450 (461)
+ ++. +|++|-+.... ..+..+.....+. ...+||--..||..
T Consensus 67 a~i~~--ad~vi~~~~~d-~~n~~~~~~a~~~~~~~~ii~~~~~~~~ 110 (153)
T 1id1_A 67 AGIDR--CRAILALSDND-ADNAFVVLSAKDMSSDVKTVLAVSDSKN 110 (153)
T ss_dssp HTTTT--CSEEEECSSCH-HHHHHHHHHHHHHTSSSCEEEECSSGGG
T ss_pred cChhh--CCEEEEecCCh-HHHHHHHHHHHHHCCCCEEEEEECCHHH
Confidence 5 665 89999776533 2222222222222 23456665667764
No 229
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=79.43 E-value=1.6 Score=41.07 Aligned_cols=34 Identities=21% Similarity=0.275 Sum_probs=27.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
..+|+|+|||.||+..|..+.. .|+ ++.++|++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~ 38 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGM-----RGL-------SFRFVDPLP 38 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 4689999999999999988754 253 688999864
No 230
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=79.40 E-value=4.9 Score=38.54 Aligned_cols=93 Identities=17% Similarity=0.168 Sum_probs=53.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhc-----------ccc-CC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-----------HEH-EP 399 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA-----------~~~-~~ 399 (461)
.||.|+|+|..|..+|..+... | .+++++|+..= .++..++... ... ..
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~-----g-------~~V~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK-----G-------QSVLAWDIDAQ-------RIKEIQDRGAIIAEGPGLAGTAHPDLL 65 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCHH-------HHHHHHHHTSEEEESSSCCEEECCSEE
T ss_pred CeEEEECCCHHHHHHHHHHHhC-----C-------CEEEEEeCCHH-------HHHHHHhcCCeEEecccccccccccee
Confidence 5899999999999999987642 4 25888887420 0111111100 000 01
Q ss_pred CCCHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCC-CCcEEEEcCC
Q 012553 400 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EVVFQALLWL 447 (461)
Q Consensus 400 ~~~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIF~Lsn 447 (461)
..++.++++. +|++|=+.. . ...+++++.+++.. +..+|+.+.|
T Consensus 66 ~~~~~~~~~~--~D~vi~~v~-~-~~~~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 66 TSDIGLAVKD--ADVILIVVP-A-IHHASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp ESCHHHHHTT--CSEEEECSC-G-GGHHHHHHHHGGGCCTTCEEEESSC
T ss_pred cCCHHHHHhc--CCEEEEeCC-c-hHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 2467777765 787763332 2 23478888776543 3455666655
No 231
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=79.23 E-value=3.7 Score=37.95 Aligned_cols=30 Identities=20% Similarity=0.281 Sum_probs=23.9
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcC
Q 012553 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (461)
Q Consensus 333 riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs 374 (461)
||.|+|+|..|.++|..+... |. +++++|+
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~-----g~-------~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSR-----GV-------EVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-----TC-------EEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHC-----CC-------eEEEeCC
Confidence 799999999999999988653 53 5776665
No 232
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=79.23 E-value=1.6 Score=43.26 Aligned_cols=107 Identities=18% Similarity=0.219 Sum_probs=67.6
Q ss_pred eEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCC--CCCHHHhhcc
Q 012553 333 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP--VNNLLDAVKV 409 (461)
Q Consensus 333 riv~~G-AGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~--~~~L~eaV~~ 409 (461)
||.|+| ||..|..+|-+|... .++ ...+.++|..-. ..+-.-.|.+. ++-..-.. ..+..++.++
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~----~~~-----~~el~L~Di~~~-~~G~a~Dl~~~--~~~~~v~~~~~~~~~~~~~~ 69 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQ----LPS-----GSELSLYDIAPV-TPGVAVDLSHI--PTAVKIKGFSGEDATPALEG 69 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH----SCT-----TEEEEEECSSTT-HHHHHHHHHTS--CSSEEEEEECSSCCHHHHTT
T ss_pred EEEEECCCCHHHHHHHHHHHhC----CCC-----CceEEEEecCCC-chhHHHHhhCC--CCCceEEEecCCCcHHHhCC
Confidence 799999 799999999877542 133 258999999741 11110012111 11000000 0256788888
Q ss_pred cCCcEEEeccCCC---CC-----------CCHHHHHHHhcCCCCcEEEEcCCCCchhh
Q 012553 410 IKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEVVFQALLWLIRKFNF 453 (461)
Q Consensus 410 vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIF~Lsnp~~~~~ 453 (461)
+|++|=+.+.+ |- +-+++++.+++++..-+|+-.+||-+.+-
T Consensus 70 --aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNPvd~~t 125 (312)
T 3hhp_A 70 --ADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPVNTTV 125 (312)
T ss_dssp --CSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSCHHHHH
T ss_pred --CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCcchhHH
Confidence 99988665543 21 23567778888898999999999988753
No 233
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=79.20 E-value=1.8 Score=42.09 Aligned_cols=37 Identities=19% Similarity=0.085 Sum_probs=28.0
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCc
Q 012553 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (461)
Q Consensus 329 l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GL 377 (461)
.+..+|+|+|||.||+..|..|.+. |+ ++.++|+.-.
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~-----G~-------~v~viE~~~~ 45 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQN-----GW-------DVRLHEKSSE 45 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEecCCC
Confidence 4467899999999999999888652 53 6888887543
No 234
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=79.04 E-value=4.2 Score=40.53 Aligned_cols=93 Identities=19% Similarity=0.351 Sum_probs=51.6
Q ss_pred HHHHHHHhC-CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccc
Q 012553 318 VVAALKLIG-GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE 396 (461)
Q Consensus 318 ll~Alk~~g-~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~ 396 (461)
.+.|+.... ..-.+++|+|+|||+.|...+.+... .|. ++++.+|+. +.+..+++.
T Consensus 200 a~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~~------------~~~~~~~~~ 256 (404)
T 3ip1_A 200 AYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKH-----AGA------SKVILSEPS------------EVRRNLAKE 256 (404)
T ss_dssp HHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSC------------HHHHHHHHH
T ss_pred HHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC------------HHHHHHHHH
Confidence 344443333 33457899999999888776655432 363 478877752 122223321
Q ss_pred -------cCCCCCHHHhhcc----cCCcEEEeccCCCCCCCHHHHHHH
Q 012553 397 -------HEPVNNLLDAVKV----IKPTILIGSSGVGRTFTKEVIEAM 433 (461)
Q Consensus 397 -------~~~~~~L~eaV~~----vkptvLIG~S~~~g~Ft~evv~~M 433 (461)
.....++.+.|+. -++|++|-+++......+..++.+
T Consensus 257 lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l 304 (404)
T 3ip1_A 257 LGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVI 304 (404)
T ss_dssp HTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHH
T ss_pred cCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHH
Confidence 0111345555543 368999987764422334555555
No 235
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=78.48 E-value=1.4 Score=41.05 Aligned_cols=33 Identities=21% Similarity=0.290 Sum_probs=27.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
..+|||+|||.||+..|..|... |+ ++.++|+.
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~vie~~ 54 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARA-----EI-------KPILYEGM 54 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEecC
Confidence 46899999999999999988653 53 58888883
No 236
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=77.88 E-value=3.1 Score=39.81 Aligned_cols=91 Identities=11% Similarity=0.197 Sum_probs=50.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhccc
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~v 410 (461)
..||.|+|+|..|.++|..+... |. +++++|+. . +.+...++. ......++.|+++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~----~---~~~~~~~~~---g~~~~~~~~~~~~-- 70 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW-----PG-------GVTVYDIR----I---EAMTPLAEA---GATLADSVADVAA-- 70 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS-----TT-------CEEEECSS----T---TTSHHHHHT---TCEECSSHHHHTT--
T ss_pred CCeEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEeCC----H---HHHHHHHHC---CCEEcCCHHHHHh--
Confidence 35899999999999999988642 53 57777863 1 112222211 0111246777665
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHhcCC-CCcEEEEcCC
Q 012553 411 KPTILIGSSGVGRTFTKEVIEAMASFN-EVVFQALLWL 447 (461)
Q Consensus 411 kptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIF~Lsn 447 (461)
+|++| ++.....-.+++++.+.+.- +.-||.-+|+
T Consensus 71 -aDvvi-~~vp~~~~~~~v~~~l~~~l~~g~ivv~~st 106 (296)
T 3qha_A 71 -ADLIH-ITVLDDAQVREVVGELAGHAKPGTVIAIHST 106 (296)
T ss_dssp -SSEEE-ECCSSHHHHHHHHHHHHTTCCTTCEEEECSC
T ss_pred -CCEEE-EECCChHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 66666 22221223455555555432 3345555554
No 237
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=77.68 E-value=1.8 Score=40.70 Aligned_cols=33 Identities=15% Similarity=0.273 Sum_probs=27.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
..+|+|+|||.||+..|..+.+. |. ++.++|+.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 40 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRA-----QL-------STLILEKG 40 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHHc-----CC-------cEEEEeCC
Confidence 46899999999999999887652 53 68899987
No 238
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=77.67 E-value=1.4 Score=45.74 Aligned_cols=38 Identities=26% Similarity=0.403 Sum_probs=32.7
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 327 ~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
+.|++.||+++|||..|..+|+.|+.+ |+ .+|.++|.+
T Consensus 36 ~~L~~~~VlvvG~GGlGs~va~~La~a-----Gv------g~i~ivD~D 73 (434)
T 1tt5_B 36 FLLDTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 73 (434)
T ss_dssp HHHHTCCEEEECSSTHHHHHHHHHHHT-----TC------CCEEEEECC
T ss_pred HHhcCCEEEEECcCHHHHHHHHHHHHc-----CC------CEEEEEcCC
Confidence 345788999999999999999999875 75 689999976
No 239
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=77.62 E-value=1.5 Score=39.71 Aligned_cols=93 Identities=15% Similarity=0.110 Sum_probs=51.9
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhh----hcc-ccCCCCCHHHh-
Q 012553 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP----WAH-EHEPVNNLLDA- 406 (461)
Q Consensus 333 riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~----fA~-~~~~~~~L~ea- 406 (461)
||+|+|+|..|..+|+.|... | .+++++|++- +......+. +.. +......|.++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~-----g-------~~v~vid~~~-------~~~~~l~~~~~~~~i~gd~~~~~~l~~a~ 62 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR-----K-------YGVVIINKDR-------ELCEEFAKKLKATIIHGDGSHKEILRDAE 62 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT-----T-------CCEEEEESCH-------HHHHHHHHHSSSEEEESCTTSHHHHHHHT
T ss_pred EEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECCH-------HHHHHHHHHcCCeEEEcCCCCHHHHHhcC
Confidence 799999999999999988652 4 3688888631 111111111 111 11111245555
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHhc-CCCCcEEEEcCCC
Q 012553 407 VKVIKPTILIGSSGVGRTFTKEVIEAMAS-FNEVVFQALLWLI 448 (461)
Q Consensus 407 V~~vkptvLIG~S~~~g~Ft~evv~~Ma~-~~erPIIF~Lsnp 448 (461)
++ ++|++|-+.... .....+..+++ .+..+-|++.+|-
T Consensus 63 i~--~ad~vi~~~~~d--~~n~~~~~~a~~~~~~~~iia~~~~ 101 (218)
T 3l4b_C 63 VS--KNDVVVILTPRD--EVNLFIAQLVMKDFGVKRVVSLVND 101 (218)
T ss_dssp CC--TTCEEEECCSCH--HHHHHHHHHHHHTSCCCEEEECCCS
T ss_pred cc--cCCEEEEecCCc--HHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 55 489999766543 22334444444 3555556665553
No 240
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=77.60 E-value=1.4 Score=41.57 Aligned_cols=32 Identities=16% Similarity=0.289 Sum_probs=25.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.||.|+|+|..|..+|..+... |. +++++|+.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA-----GY-------SLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhC-----CC-------EEEEEeCC
Confidence 4899999999999999988642 42 57888763
No 241
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=77.52 E-value=1.9 Score=42.62 Aligned_cols=35 Identities=31% Similarity=0.502 Sum_probs=28.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
++|||+|||.||+..|..|.+. |.+ .+|.++|+..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~-----g~~-----~~V~lie~~~ 36 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQA-----KYP-----GRIALINDEK 36 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TCC-----SCEEEECCSS
T ss_pred CCEEEEcChHHHHHHHHHHHhh-----CcC-----CCEEEEeCCC
Confidence 5799999999999999988653 542 3799999865
No 242
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=77.52 E-value=6.8 Score=37.20 Aligned_cols=103 Identities=16% Similarity=0.217 Sum_probs=59.2
Q ss_pred CcccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChh-hhhhcc-ccCCCCCHH
Q 012553 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF-KKPWAH-EHEPVNNLL 404 (461)
Q Consensus 328 ~l~d~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~-k~~fA~-~~~~~~~L~ 404 (461)
.++..+|+|.|| |-.|..+++.|++. | -+++.+|+.. ....+.+... +..+.. +.....++.
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~---~~~~~~l~~~~~~~~~~~Dl~d~~~~~ 82 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLER-----G-------DKVVGIDNFA---TGRREHLKDHPNLTFVEGSIADHALVN 82 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEECCS---SCCGGGSCCCTTEEEEECCTTCHHHHH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHC-----C-------CEEEEEECCC---ccchhhHhhcCCceEEEEeCCCHHHHH
Confidence 355678999995 88888888887652 4 3688888742 1111112110 111111 212223577
Q ss_pred HhhcccCCcEEEeccCCCCC-------------CCHHHHHHHhcCCCCcEEEEc
Q 012553 405 DAVKVIKPTILIGSSGVGRT-------------FTKEVIEAMASFNEVVFQALL 445 (461)
Q Consensus 405 eaV~~vkptvLIG~S~~~g~-------------Ft~evv~~Ma~~~erPIIF~L 445 (461)
++++..++|++|=+.+.... -|..+++++.+..-+.|||.=
T Consensus 83 ~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~S 136 (333)
T 2q1w_A 83 QLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQ 136 (333)
T ss_dssp HHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHhccCCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEEC
Confidence 78877789999987765432 134577777765556788753
No 243
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=77.15 E-value=2 Score=43.20 Aligned_cols=42 Identities=26% Similarity=0.371 Sum_probs=30.8
Q ss_pred HhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCc
Q 012553 324 LIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (461)
Q Consensus 324 ~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GL 377 (461)
+.++.-+..+|+|+|||.||+..|..|.+. | .++.++++..-
T Consensus 4 ~~~~~~~~~~v~IIGaG~aGl~aA~~L~~~-----g-------~~v~v~E~~~~ 45 (489)
T 2jae_A 4 LIGKVKGSHSVVVLGGGPAGLCSAFELQKA-----G-------YKVTVLEARTR 45 (489)
T ss_dssp CCCCCCSCCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSSS
T ss_pred hhhcccCCCCEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEeccCC
Confidence 344444567999999999999999888652 5 26777776643
No 244
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=77.12 E-value=3.8 Score=40.70 Aligned_cols=37 Identities=19% Similarity=0.322 Sum_probs=28.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCcc
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi 378 (461)
.+|||+|||.||+..|..|.+. |. ..+|.++|+..-.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~-----g~-----~~~V~li~~~~~~ 39 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAE-----GF-----EGRISLIGDEPHL 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEEECSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHcc-----Cc-----CCeEEEEECCCCC
Confidence 4899999999999999988653 54 2368998886543
No 245
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=76.95 E-value=2.2 Score=42.57 Aligned_cols=37 Identities=27% Similarity=0.434 Sum_probs=28.3
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCcc
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi 378 (461)
+.-||||+|||.||+..|..|. ..| -+|.++|+.--+
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~-----~~~-------~~itlie~~~~~ 44 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAAL-----GKC-------DDITMINSEKYL 44 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHT-----TTC-------SCEEEECSSSSC
T ss_pred CCCCEEEEcCcHHHHHHHHHHh-----CCC-------CEEEEEECCCCC
Confidence 3458999999999999999881 112 479999886543
No 246
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=76.91 E-value=2.9 Score=40.77 Aligned_cols=34 Identities=32% Similarity=0.459 Sum_probs=27.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
+.+|+|+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~-----~G~-------~V~v~E~~~ 38 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNK-----SGF-------KVKIVEKQK 38 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSC
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 4589999999999999987754 364 688999874
No 247
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=76.67 E-value=7.1 Score=36.51 Aligned_cols=92 Identities=11% Similarity=0.147 Sum_probs=57.9
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcc-ccCCCCCHHHhhcc
Q 012553 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 409 (461)
Q Consensus 332 ~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~ 409 (461)
.+|+|.|| |-.|..+++.|++. | .+++.+++. .+..+ +. ...+.. +.. ..++.++++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~----~~~~~-~~--~~~~~~~Dl~-~~~~~~~~~- 61 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKND-----G-------NTPIILTRS----IGNKA-IN--DYEYRVSDYT-LEDLINQLN- 61 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEESC----CC--------CCEEEECCCC-HHHHHHHTT-
T ss_pred CEEEEECCCcHHHHHHHHHHHhC-----C-------CEEEEEeCC----CCccc-CC--ceEEEEcccc-HHHHHHhhc-
Confidence 58999995 99999999888752 4 368888875 22111 22 111111 222 345777887
Q ss_pred cCCcEEEeccCCCCC------------CCHHHHHHHhcCCCCcEEEEc
Q 012553 410 IKPTILIGSSGVGRT------------FTKEVIEAMASFNEVVFQALL 445 (461)
Q Consensus 410 vkptvLIG~S~~~g~------------Ft~evv~~Ma~~~erPIIF~L 445 (461)
++|++|=+.+..+. -|..+++++.+..-+-+||.=
T Consensus 62 -~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~S 108 (311)
T 3m2p_A 62 -DVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYAS 108 (311)
T ss_dssp -TCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred -CCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEc
Confidence 49999988775432 146788888876656688753
No 248
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=76.56 E-value=2.3 Score=40.00 Aligned_cols=33 Identities=21% Similarity=0.399 Sum_probs=27.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
+..|+|+|||.||+.+|-.+.+ .|. ++.++|+.
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~-----~G~-------~V~vlE~~ 36 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAA-----GGH-------EVLVAEAA 36 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 4579999999999999988865 263 68899987
No 249
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=76.46 E-value=2.3 Score=41.60 Aligned_cols=36 Identities=14% Similarity=0.175 Sum_probs=27.4
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 329 l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
-+..+|+|+|||.||+..|-.|.+. |+ ++.++|+.-
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~-----G~-------~V~v~E~~~ 56 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQS-----GI-------DCDVYEAVK 56 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-----CC-------CEEEEeCCC
Confidence 3457899999999999999888653 64 577777754
No 250
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=76.43 E-value=6.9 Score=35.03 Aligned_cols=102 Identities=17% Similarity=0.146 Sum_probs=58.4
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhc-cccCCCCCHHHh
Q 012553 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-HEHEPVNNLLDA 406 (461)
Q Consensus 329 l~d~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA-~~~~~~~~L~ea 406 (461)
++..+++|.|| |-.|..+++.|+.. |. ..+++++|++. ++.+.+......+. -+-....++.++
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~-----G~-----~~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~ 81 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQ-----GL-----FSKVTLIGRRK----LTFDEEAYKNVNQEVVDFEKLDDYASA 81 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHH-----TC-----CSEEEEEESSC----CCCCSGGGGGCEEEECCGGGGGGGGGG
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcC-----CC-----CCEEEEEEcCC----CCccccccCCceEEecCcCCHHHHHHH
Confidence 44578999996 77888888887653 52 13788888752 11111111111111 121222456777
Q ss_pred hcccCCcEEEeccCCCC-------------CCCHHHHHHHhcCCCCcEEEEcC
Q 012553 407 VKVIKPTILIGSSGVGR-------------TFTKEVIEAMASFNEVVFQALLW 446 (461)
Q Consensus 407 V~~vkptvLIG~S~~~g-------------~Ft~evv~~Ma~~~erPIIF~Ls 446 (461)
++. +|++|=+.+... .-+..+++.|.+..-+-||+.=|
T Consensus 82 ~~~--~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS 132 (242)
T 2bka_A 82 FQG--HDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSS 132 (242)
T ss_dssp GSS--CSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hcC--CCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEcc
Confidence 774 899998876531 01456777887765566777543
No 251
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=76.43 E-value=16 Score=33.50 Aligned_cols=32 Identities=19% Similarity=0.387 Sum_probs=25.7
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 333 riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
||.|+|+|..|..+|..+... |. .+++++|+.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~-----g~------~~v~~~~r~ 33 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQ-----GG------YRIYIANRG 33 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----CS------CEEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHC-----CC------CeEEEECCC
Confidence 799999999999999988653 42 467888864
No 252
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=76.41 E-value=2.3 Score=40.72 Aligned_cols=35 Identities=26% Similarity=0.391 Sum_probs=28.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCc
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GL 377 (461)
+..|+|+|||.||+.+|-.|.+. |+ ++.++|+..+
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~~-----G~-------~V~llE~~~~ 51 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAKE-----NK-------NTALFESGTM 51 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-----CC-------cEEEEeCCCC
Confidence 46899999999999999988752 53 6999998643
No 253
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=76.37 E-value=2.2 Score=40.00 Aligned_cols=33 Identities=24% Similarity=0.389 Sum_probs=27.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
+.+|+|+|||.||+..|..+.+. |. ++.++|+.
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 48 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARS-----GF-------SVAILDKA 48 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-----CC-------cEEEEeCC
Confidence 46899999999999999888652 53 68899875
No 254
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=76.35 E-value=2.1 Score=39.40 Aligned_cols=33 Identities=15% Similarity=0.156 Sum_probs=25.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEE-EcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICL-VDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~l-vDs~ 375 (461)
..+|||+|||.||+..|..+... |. ++.+ +|+.
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~li~e~~ 37 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRG-----GL-------KNVVMFEKG 37 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-----TC-------SCEEEECSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----CC-------CeEEEEeCC
Confidence 35899999999999999988653 53 4566 8873
No 255
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=76.33 E-value=8.2 Score=37.96 Aligned_cols=90 Identities=12% Similarity=0.113 Sum_probs=58.2
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcc----ccCCCCCHHH
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH----EHEPVNNLLD 405 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~----~~~~~~~L~e 405 (461)
...++.|+|+|..|-.+++.+... .+ .++|+++|+. + ...+.+.+.. +.... ++.|
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~----~~------~~~V~v~~r~------~---a~~la~~l~~~~g~~~~~~-~~~e 179 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSAR----FA------LEAILVHDPY------A---SPEILERIGRRCGVPARMA-APAD 179 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHH----SC------CCEEEEECTT------C---CHHHHHHHHHHHTSCEEEC-CHHH
T ss_pred CCcEEEEECccHHHHHHHHHHHHh----CC------CcEEEEECCc------H---HHHHHHHHHHhcCCeEEEe-CHHH
Confidence 467999999999999988877643 12 3689999986 2 1222222221 11123 8999
Q ss_pred hhcccCCcEEEeccCCC-CCCCHHHHHHHhcCCCCcEEEEcCC
Q 012553 406 AVKVIKPTILIGSSGVG-RTFTKEVIEAMASFNEVVFQALLWL 447 (461)
Q Consensus 406 aV~~vkptvLIG~S~~~-g~Ft~evv~~Ma~~~erPIIF~Lsn 447 (461)
+++. +|++|-++... ..|..+++ .+..+|..+..
T Consensus 180 av~~--aDIVi~aT~s~~pvl~~~~l------~~G~~V~~vGs 214 (313)
T 3hdj_A 180 IAAQ--ADIVVTATRSTTPLFAGQAL------RAGAFVGAIGS 214 (313)
T ss_dssp HHHH--CSEEEECCCCSSCSSCGGGC------CTTCEEEECCC
T ss_pred HHhh--CCEEEEccCCCCcccCHHHc------CCCcEEEECCC
Confidence 9998 99999765433 25554433 24678887764
No 256
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=76.27 E-value=1.6 Score=42.29 Aligned_cols=26 Identities=19% Similarity=0.332 Sum_probs=20.0
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHH
Q 012553 328 TLAEHRFLFLGAGEAGTGIAELIALE 353 (461)
Q Consensus 328 ~l~d~riv~~GAGsAgiGiA~ll~~~ 353 (461)
.....||.|+|||+-|.++|..|..+
T Consensus 16 ~~~~~kI~IiGaGa~G~~~a~~L~~~ 41 (318)
T 3hwr_A 16 YFQGMKVAIMGAGAVGCYYGGMLARA 41 (318)
T ss_dssp ----CEEEEESCSHHHHHHHHHHHHT
T ss_pred hccCCcEEEECcCHHHHHHHHHHHHC
Confidence 35568999999999999999998653
No 257
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=76.19 E-value=2.4 Score=40.61 Aligned_cols=34 Identities=15% Similarity=0.206 Sum_probs=27.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
..+|||+|||.||+..|..+.. .|+ ++.++|+..
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~ 47 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGM-----NNI-------SCRIIESMP 47 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecCC
Confidence 5689999999999999988754 253 688998864
No 258
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=76.17 E-value=2.3 Score=41.84 Aligned_cols=36 Identities=14% Similarity=0.199 Sum_probs=27.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
.+|||+|||.||+..|..|.+..- .| .+|.++|++-
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~--~g-------~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVG--SK-------ADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHG--GG-------SEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCC--CC-------CeEEEEeCCC
Confidence 479999999999999999876210 13 3788888764
No 259
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=76.15 E-value=2.2 Score=41.56 Aligned_cols=34 Identities=21% Similarity=0.345 Sum_probs=27.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
+.+|+|+|||.||+..|..|.+. |+ ++.++|+..
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~-----G~-------~V~viE~~~ 39 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQ-----GH-------RVVVVEQAR 39 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-----CC-------cEEEEeCCC
Confidence 46899999999999999988653 64 577787653
No 260
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=76.12 E-value=2.3 Score=42.18 Aligned_cols=38 Identities=13% Similarity=0.237 Sum_probs=29.5
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCc
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GL 377 (461)
...+|||+|||.||+..|..|.+. |.+ .+|.++|+..-
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~-----g~~-----~~V~lie~~~~ 45 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQN-----GFE-----GRVLVIGREPE 45 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-----TCC-----SCEEEEESSSS
T ss_pred CCCcEEEECChHHHHHHHHHHHcc-----CcC-----CCEEEEecCCC
Confidence 356899999999999999998653 542 36888888643
No 261
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=76.09 E-value=2.3 Score=40.84 Aligned_cols=34 Identities=21% Similarity=0.310 Sum_probs=26.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
+-.|+|+|||.||+..|-.|.+. |+ ++.++|+.-
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~-----G~-------~V~l~E~~~ 37 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKY-----GL-------KTLMIEKRP 37 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 45799999999999999888652 64 577777764
No 262
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=76.07 E-value=0.89 Score=44.02 Aligned_cols=31 Identities=16% Similarity=0.272 Sum_probs=24.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.||.|+|||+-|..+|..|. + | .+++++++.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~-----g-------~~V~~~~r~ 33 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-L-----Y-------HDVTVVTRR 33 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T-----T-------SEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHh-c-----C-------CceEEEECC
Confidence 58999999999999998886 3 4 357777664
No 263
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=75.98 E-value=1 Score=38.19 Aligned_cols=32 Identities=16% Similarity=0.407 Sum_probs=26.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.+|+|+|+|..|..+|+.|... |. +++++|++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~-----g~-------~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS-----DI-------PLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEECC
Confidence 4789999999999999988652 53 68888874
No 264
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=75.97 E-value=2.7 Score=41.12 Aligned_cols=35 Identities=11% Similarity=0.176 Sum_probs=27.2
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
...+|+|+|||.||+..|..|... |+ ++.++|+.-
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~-----G~-------~v~v~E~~~ 38 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDA-----GV-------DVDVYERSP 38 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC-----CC-------CEEEEecCC
Confidence 356899999999999999988653 64 577777653
No 265
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=75.87 E-value=1.8 Score=47.22 Aligned_cols=39 Identities=28% Similarity=0.391 Sum_probs=33.7
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 327 ~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
.+|++.||+|+|||..|..+|+.|+.+ |+ .+|.++|.+=
T Consensus 13 ~kL~~s~VlVVGaGGLGsevak~La~a-----GV------G~ItlvD~D~ 51 (640)
T 1y8q_B 13 EAVAGGRVLVVGAGGIGCELLKNLVLT-----GF------SHIDLIDLDT 51 (640)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEEECCB
T ss_pred HHHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEecCCE
Confidence 357789999999999999999999875 75 6999999873
No 266
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=77.68 E-value=0.55 Score=43.09 Aligned_cols=25 Identities=12% Similarity=0.177 Sum_probs=21.2
Q ss_pred cccceEEEeCcchHHHHHHHHHHHH
Q 012553 329 LAEHRFLFLGAGEAGTGIAELIALE 353 (461)
Q Consensus 329 l~d~riv~~GAGsAgiGiA~ll~~~ 353 (461)
+.+.||.|+|+|..|..+|..+...
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~ 41 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQC 41 (201)
Confidence 4567899999999999999988653
No 267
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=75.76 E-value=2.9 Score=41.95 Aligned_cols=34 Identities=21% Similarity=0.308 Sum_probs=26.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.||||+|||.||+..|..|... +- .-+|.++|++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~VtlI~~~ 36 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNL-----MP-----DLKITLISDR 36 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CT-----TCEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHhcc-----Cc-----CCeEEEEcCC
Confidence 4799999999999999988653 21 1368888875
No 268
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=75.62 E-value=2.3 Score=41.65 Aligned_cols=36 Identities=17% Similarity=0.431 Sum_probs=28.0
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 329 l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
..+.+|+|+|||.||+..|..|.. .|+ ++.++|+..
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 59 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQ-----NGI-------DVSVYERDN 59 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEECSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 345689999999999999988764 364 677888753
No 269
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=75.53 E-value=9.1 Score=36.67 Aligned_cols=101 Identities=12% Similarity=0.122 Sum_probs=61.2
Q ss_pred CcccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCCh-hhhhhcc-ccC-CCCCH
Q 012553 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH-FKKPWAH-EHE-PVNNL 403 (461)
Q Consensus 328 ~l~d~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~-~k~~fA~-~~~-~~~~L 403 (461)
.+...+|+|.|| |-.|..+++.|++. .| -+++.+|+.. ++...+.. .+..+.. +.. ...++
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~r~~----~~~~~~~~~~~v~~~~~Dl~~d~~~~ 85 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILET----TD-------WEVFGMDMQT----DRLGDLVKHERMHFFEGDITINKEWV 85 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHH----SS-------CEEEEEESCC----TTTGGGGGSTTEEEEECCTTTCHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhC----CC-------CEEEEEeCCh----hhhhhhccCCCeEEEeCccCCCHHHH
Confidence 356789999996 99999999888653 13 3788888742 11111111 1111211 112 22457
Q ss_pred HHhhcccCCcEEEeccCCCC----------------CCCHHHHHHHhcCCCCcEEEEcC
Q 012553 404 LDAVKVIKPTILIGSSGVGR----------------TFTKEVIEAMASFNEVVFQALLW 446 (461)
Q Consensus 404 ~eaV~~vkptvLIG~S~~~g----------------~Ft~evv~~Ma~~~erPIIF~Ls 446 (461)
.+++++ +|++|=+.+... .-|..+++++.+.. +.+||.=|
T Consensus 86 ~~~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS 141 (372)
T 3slg_A 86 EYHVKK--CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPST 141 (372)
T ss_dssp HHHHHH--CSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECC
T ss_pred HHHhcc--CCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCc
Confidence 778886 999997665432 23567888888777 78888654
No 270
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=75.12 E-value=2.5 Score=40.52 Aligned_cols=33 Identities=18% Similarity=0.169 Sum_probs=26.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
..||.|+|+|..|.++|..+... |. +++++|+.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 39 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRA-----GL-------STWGADLN 39 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEECC
Confidence 36899999999999999988753 53 67788864
No 271
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=75.05 E-value=2.3 Score=39.84 Aligned_cols=33 Identities=21% Similarity=0.341 Sum_probs=26.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
..|+|+|||.+|+.+|..|.+. |+ ++.++|+.-
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~-----G~-------~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAA-----GH-------QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHC-----CC-------cEEEEECCC
Confidence 4699999999999999988653 64 578888763
No 272
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=74.97 E-value=2.8 Score=41.12 Aligned_cols=32 Identities=19% Similarity=0.271 Sum_probs=26.3
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 333 riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
+|+|+|||.||+..|..|.+. |. ++.+++++.
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~-----G~-------~V~vlE~~~ 34 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNA-----GK-------KVLLLEGGE 34 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHHc-----CC-------eEEEEecCC
Confidence 699999999999999988753 53 688888754
No 273
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=74.94 E-value=3 Score=40.22 Aligned_cols=35 Identities=14% Similarity=0.247 Sum_probs=28.8
Q ss_pred cceEEEeCcchHHHHHHHHHHH-HHHHhcCCChhhccceEEEEcCCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIAL-EISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~-~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
+..|+|+|||.+|+.+|-.|.+ . | ..++.++|+..
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~~-----G------~~~V~vlE~~~ 56 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKNH-----G------ITNVAVLEKGW 56 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHH-----C------CCCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHhc-----C------CCcEEEEeCCC
Confidence 5689999999999999998876 3 5 13799999875
No 274
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=74.94 E-value=2.7 Score=36.19 Aligned_cols=35 Identities=20% Similarity=0.364 Sum_probs=27.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC-Ccc
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK-GLI 378 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~-GLi 378 (461)
-+++|+|||.+|+..|..+... | .++.++|+. +++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-----g-------~~v~lie~~~~~~ 37 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-----G-------LKVLVLDGGRSKV 37 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECSCCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEeCCCCcc
Confidence 3799999999999999888652 4 378888875 344
No 275
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=74.44 E-value=2.5 Score=40.58 Aligned_cols=34 Identities=18% Similarity=0.385 Sum_probs=28.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
+..|+|+|||.+|+.+|-.|.+. |. ++.++|+..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~-----G~-------~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKR-----GE-------EVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeCCC
Confidence 45799999999999999988652 53 699999874
No 276
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=74.30 E-value=3.4 Score=32.62 Aligned_cols=84 Identities=17% Similarity=0.180 Sum_probs=51.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhh---hhc-cccCCCCCHHHh
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK---PWA-HEHEPVNNLLDA 406 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~---~fA-~~~~~~~~L~ea 406 (461)
..+|+|+|+|..|..+++.+... | ..+++++|++. . .+...+. .+. -+.....++.++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~-----g------~~~v~~~~r~~----~---~~~~~~~~~~~~~~~d~~~~~~~~~~ 66 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTS-----S------NYSVTVADHDL----A---ALAVLNRMGVATKQVDAKDEAGLAKA 66 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC-----S------SEEEEEEESCH----H---HHHHHHTTTCEEEECCTTCHHHHHHH
T ss_pred cCeEEEECCCHHHHHHHHHHHhC-----C------CceEEEEeCCH----H---HHHHHHhCCCcEEEecCCCHHHHHHH
Confidence 56899999999999999888652 4 14688888741 1 1111110 010 011112356777
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHhcC
Q 012553 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASF 436 (461)
Q Consensus 407 V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~ 436 (461)
++. +|++|=+.+ ..++..+++...+.
T Consensus 67 ~~~--~d~vi~~~~--~~~~~~~~~~~~~~ 92 (118)
T 3ic5_A 67 LGG--FDAVISAAP--FFLTPIIAKAAKAA 92 (118)
T ss_dssp TTT--CSEEEECSC--GGGHHHHHHHHHHT
T ss_pred HcC--CCEEEECCC--chhhHHHHHHHHHh
Confidence 775 899996663 34678888877653
No 277
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=74.29 E-value=5.6 Score=37.27 Aligned_cols=101 Identities=15% Similarity=0.229 Sum_probs=57.0
Q ss_pred ccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcC--CCChh----hhhhcc-ccCCCC
Q 012553 330 AEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD--SLQHF----KKPWAH-EHEPVN 401 (461)
Q Consensus 330 ~d~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~--~L~~~----k~~fA~-~~~~~~ 401 (461)
++.+|+|.|| |-.|..+++.|++. | -+++.+|++. ...+ .+... +..+.. +.....
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~-----G-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 65 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEK-----G-------YEVYGADRRS----GEFASWRLKELGIENDVKIIHMDLLEFS 65 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEECSCC----STTTTHHHHHTTCTTTEEECCCCTTCHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-----C-------CEEEEEECCC----cccccccHhhccccCceeEEECCCCCHH
Confidence 4578999998 88888888887652 5 3688888742 1100 00000 001111 111223
Q ss_pred CHHHhhcccCCcEEEeccCCCCC------C----------CHHHHHHHhcCCC-CcEEEEcC
Q 012553 402 NLLDAVKVIKPTILIGSSGVGRT------F----------TKEVIEAMASFNE-VVFQALLW 446 (461)
Q Consensus 402 ~L~eaV~~vkptvLIG~S~~~g~------F----------t~evv~~Ma~~~e-rPIIF~Ls 446 (461)
++.++++.+++|++|=+.+.... + |..+++++.+... +.|||.=|
T Consensus 66 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 127 (345)
T 2z1m_A 66 NIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQAST 127 (345)
T ss_dssp HHHHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEec
Confidence 57788888789999988775421 0 3345555554433 66777533
No 278
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=74.04 E-value=2.8 Score=40.23 Aligned_cols=35 Identities=26% Similarity=0.301 Sum_probs=28.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCcc
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi 378 (461)
..|+|+|||.+|+.+|-.|.+. |. ++.++|+....
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~-----G~-------~V~vie~~~~~ 38 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQ-----GV-------KTLLVDAFDPP 38 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCCCCC
Confidence 5799999999999999988652 53 69999987543
No 279
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=73.69 E-value=3.1 Score=42.72 Aligned_cols=35 Identities=23% Similarity=0.243 Sum_probs=28.6
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
...+|+|+|||.||+..|..|... |. ++.++|+..
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~-----G~-------~V~v~e~~~ 155 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK-----GY-------EVHVYDRYD 155 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeccC
Confidence 357899999999999999998753 53 588998853
No 280
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=73.57 E-value=2 Score=40.01 Aligned_cols=34 Identities=26% Similarity=0.370 Sum_probs=26.3
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
...+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAAR-----ANL-------QPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT-----TTC-------CCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEccC
Confidence 35689999999999999988864 253 56778853
No 281
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=73.41 E-value=2.8 Score=40.00 Aligned_cols=35 Identities=11% Similarity=0.229 Sum_probs=28.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCcc
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi 378 (461)
..|+|+|||.+|+.+|-.|.+. |+ ++.++|+....
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~-----G~-------~V~vle~~~~~ 37 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRA-----GL-------NVLMTDAHMPP 37 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHT-----TC-------CEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecCCCC
Confidence 4799999999999999988653 53 68999987543
No 282
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=73.26 E-value=2.8 Score=42.68 Aligned_cols=38 Identities=18% Similarity=0.276 Sum_probs=27.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.+|+|+|||.||+..|..+.+.. ..|++ ..++.++|+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~--~~G~~----~~~V~v~E~~ 40 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQ--EKGAE----IPELVCFEKQ 40 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHH--HTTCC----CCEEEEECSS
T ss_pred CcEEEECccHHHHHHHHHHHhhh--hcCCC----CCcEEEEEcC
Confidence 47999999999999999987631 12542 0138888876
No 283
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=73.19 E-value=1.3 Score=42.41 Aligned_cols=95 Identities=16% Similarity=0.108 Sum_probs=58.8
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhh----hc-------c-
Q 012553 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP----WA-------H- 395 (461)
Q Consensus 329 l~d~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~----fA-------~- 395 (461)
++..+|+|.|| |-.|..+++.|++. | .+++.+++..- ..+.+.. +. .
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~-----g-------~~V~~l~R~~~--------~~~~~~~~~~~l~~~~v~~~~~ 67 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDA-----H-------RPTYILARPGP--------RSPSKAKIFKALEDKGAIIVYG 67 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHT-----T-------CCEEEEECSSC--------CCHHHHHHHHHHHHTTCEEEEC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHC-----C-------CCEEEEECCCC--------CChhHHHHHHHHHhCCcEEEEe
Confidence 44578999999 99999999888652 4 36888877530 0111111 11 0
Q ss_pred ccCCCCCHHHhhcccCCcEEEeccCCCC-CCCHHHHHHHhcCC-CCcEEE
Q 012553 396 EHEPVNNLLDAVKVIKPTILIGSSGVGR-TFTKEVIEAMASFN-EVVFQA 443 (461)
Q Consensus 396 ~~~~~~~L~eaV~~vkptvLIG~S~~~g-~Ft~evv~~Ma~~~-erPIIF 443 (461)
+.....+|.++++..++|++|=+.+... .-+..+++++.+.. -+-+|+
T Consensus 68 Dl~d~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 68 LINEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp CTTCHHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred ecCCHHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 1122246888898566999998876543 24678899888765 444553
No 284
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=73.10 E-value=3.2 Score=40.20 Aligned_cols=33 Identities=15% Similarity=0.337 Sum_probs=26.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
.+|+|+|||.||+..|-.|... |+ ++.++|+.-
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~-----G~-------~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKA-----GI-------DNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 4799999999999999988653 64 577777654
No 285
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=73.07 E-value=3.2 Score=41.87 Aligned_cols=33 Identities=15% Similarity=0.235 Sum_probs=27.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
+.+|||+|||.||+..|..+.+. | .++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~-----g-------~~V~lie~~ 36 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQ-----G-------AQVTLIERG 36 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCC
Confidence 46899999999999999877642 5 379999987
No 286
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=73.01 E-value=2.4 Score=39.77 Aligned_cols=33 Identities=24% Similarity=0.281 Sum_probs=26.7
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcC
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs 374 (461)
...+|+|+|||.||+..|..+... |+ ++.++|+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~-----g~-------~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARA-----EL-------KPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEec
Confidence 356899999999999999988652 53 5788887
No 287
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=72.94 E-value=3.3 Score=41.09 Aligned_cols=36 Identities=19% Similarity=0.378 Sum_probs=28.9
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcC
Q 012553 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (461)
Q Consensus 328 ~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs 374 (461)
...+..|||+|||.||+.+|-.|.+. | ..++.++|+
T Consensus 20 ~m~~~dVvIIGgGiaGls~A~~La~~-----G------~~~V~vlE~ 55 (448)
T 3axb_A 20 HMPRFDYVVVGAGVVGLAAAYYLKVW-----S------GGSVLVVDA 55 (448)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHH-----H------CSCEEEEES
T ss_pred cCCcCCEEEECcCHHHHHHHHHHHhC-----C------CCcEEEEcc
Confidence 34567899999999999999988764 3 147999998
No 288
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=72.91 E-value=3.5 Score=40.57 Aligned_cols=35 Identities=11% Similarity=0.144 Sum_probs=27.0
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 329 l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
|+..+|.|+|+|..|.++|..+... |. +++++|+.
T Consensus 14 l~~~~I~IIG~G~mG~alA~~L~~~-----G~-------~V~~~~~~ 48 (338)
T 1np3_A 14 IQGKKVAIIGYGSQGHAHACNLKDS-----GV-------DVTVGLRS 48 (338)
T ss_dssp HHTSCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECCT
T ss_pred hcCCEEEEECchHHHHHHHHHHHHC-----cC-------EEEEEECC
Confidence 3456899999999999999988653 53 57777764
No 289
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=72.89 E-value=11 Score=39.53 Aligned_cols=66 Identities=26% Similarity=0.214 Sum_probs=46.8
Q ss_pred CCCceeccCCC---chhHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHH
Q 012553 298 TTHLVFNDDIQ---GTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (461)
Q Consensus 298 ~~~~~FnDDiQ---GTaaV~LAgll~Alk~------------------~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~ 356 (461)
..+.|.|---- .+|=-++|.+++..|- .|..|.+.++.|+|.|..|..+|+.+...
T Consensus 88 ~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~l~~~--- 164 (529)
T 1ygy_A 88 RGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAAF--- 164 (529)
T ss_dssp TTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCTTCEEEEECCSHHHHHHHHHHHTT---
T ss_pred CCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccCcCccccCCCEEEEEeeCHHHHHHHHHHHhC---
Confidence 35666664332 2444567888876653 25678999999999999999999988542
Q ss_pred hcCCChhhccceEEEEcCC
Q 012553 357 QTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 357 ~~Gls~eeA~~~i~lvDs~ 375 (461)
|+ +++.+|+.
T Consensus 165 --G~-------~V~~~d~~ 174 (529)
T 1ygy_A 165 --GA-------YVVAYDPY 174 (529)
T ss_dssp --TC-------EEEEECTT
T ss_pred --CC-------EEEEECCC
Confidence 53 68888874
No 290
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=72.83 E-value=3 Score=38.72 Aligned_cols=33 Identities=18% Similarity=0.227 Sum_probs=26.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.+|+|+|||.||+..|..+.+. |. .++.++|+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~-----g~------~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRG-----GV------KNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC------SSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHHC-----CC------CcEEEEcCC
Confidence 3799999999999999987652 53 278899985
No 291
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=72.62 E-value=9.5 Score=33.48 Aligned_cols=50 Identities=16% Similarity=0.189 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 314 VLAGVVAALKLIGGTLAEHRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 314 ~LAgll~Alk~~g~~l~d~riv~~G-AGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.++..+.++.....--.+++++|.| +|..|..+++++... |. +++.+|+.
T Consensus 22 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-----G~-------~V~~~~~~ 72 (198)
T 1pqw_A 22 AYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMI-----GA-------RIYTTAGS 72 (198)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHH-----TC-------EEEEEESS
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHc-----CC-------EEEEEeCC
Confidence 4444455554333334578999999 588888888776542 52 58877763
No 292
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=72.52 E-value=3.1 Score=40.92 Aligned_cols=34 Identities=26% Similarity=0.312 Sum_probs=26.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
+.+|+|+|||.||+..|..|... |++ ++.++|+.
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~-----G~~------~v~v~E~~ 37 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQA-----GIG------KVTLLESS 37 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----TCS------EEEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHHhC-----CCC------eEEEEECC
Confidence 45899999999999999988653 652 26677664
No 293
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=72.51 E-value=3.2 Score=40.26 Aligned_cols=36 Identities=14% Similarity=0.285 Sum_probs=29.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCcc
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi 378 (461)
+..|||+|||.+|+.+|-.+.+. |. ++.++|+....
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~-----G~-------~V~vlE~~~~~ 39 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAER-----GH-------RVLVLERHTFF 39 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSCTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeCCCCC
Confidence 35799999999999999888652 63 68999987654
No 294
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=72.18 E-value=3.9 Score=39.26 Aligned_cols=34 Identities=21% Similarity=0.324 Sum_probs=27.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
+..|+|+|||.+|+.+|-.|.+ .| .++.++|+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~-----~G-------~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILAR-----KG-------YSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CC-------CEEEEEeccC
Confidence 4589999999999999998854 25 3799999864
No 295
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=72.08 E-value=2.9 Score=42.20 Aligned_cols=34 Identities=18% Similarity=0.268 Sum_probs=26.6
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 333 riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
||||+|||.||+..|..+.+. |. .-+|.++|+..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~-----g~-----~~~V~lie~~~ 35 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL-----DK-----ESDIIIFEKDR 35 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-----CS-----SSCEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-----CC-----CCcEEEEeCCC
Confidence 799999999999999887653 42 23688888753
No 296
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=72.05 E-value=2.9 Score=38.65 Aligned_cols=32 Identities=16% Similarity=0.298 Sum_probs=25.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.||.|+|+|..|..+|..+.. .| .+++++|+.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~-----~g-------~~v~~~~~~ 35 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQ-----TP-------HELIISGSS 35 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-----SS-------CEEEEECSS
T ss_pred cEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEECCC
Confidence 489999999999999887753 23 368888864
No 297
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=71.96 E-value=5.2 Score=37.45 Aligned_cols=78 Identities=14% Similarity=0.169 Sum_probs=43.7
Q ss_pred CcccceEEEeCcc-h--HHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcc------ccC
Q 012553 328 TLAEHRFLFLGAG-E--AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH------EHE 398 (461)
Q Consensus 328 ~l~d~riv~~GAG-s--AgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~------~~~ 398 (461)
.+++.+++|.||. . .|.++|+.++. .|. +++++|+.-+ . +.+...++.+.+ +..
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~-----~G~-------~V~~~~r~~~--~---~~~~~l~~~~~~~~~~~~Dl~ 85 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHR-----EGA-------ELAFTYVGQF--K---DRVEKLCAEFNPAAVLPCDVI 85 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHH-----TTC-------EEEEEECTTC--H---HHHHHHHGGGCCSEEEECCTT
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHH-----cCC-------EEEEeeCchH--H---HHHHHHHHhcCCceEEEeecC
Confidence 4778899999983 4 56667777654 252 6888887640 0 111111111111 111
Q ss_pred CCCCHHHhhccc-----CCcEEEeccCCC
Q 012553 399 PVNNLLDAVKVI-----KPTILIGSSGVG 422 (461)
Q Consensus 399 ~~~~L~eaV~~v-----kptvLIG~S~~~ 422 (461)
...++.++++.+ ++|+||=..+..
T Consensus 86 ~~~~v~~~~~~~~~~~g~id~li~nAg~~ 114 (280)
T 3nrc_A 86 SDQEIKDLFVELGKVWDGLDAIVHSIAFA 114 (280)
T ss_dssp CHHHHHHHHHHHHHHCSSCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCccC
Confidence 123455555544 689999777654
No 298
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=71.94 E-value=5 Score=42.67 Aligned_cols=37 Identities=11% Similarity=0.286 Sum_probs=30.0
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCc
Q 012553 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (461)
Q Consensus 329 l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GL 377 (461)
.++.+|||+|||.||+..|-.|.. .|+ ++.++|+.-.
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar-----~G~-------~V~LiEr~~~ 57 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHK-----LGH-------DVTIYERSAF 57 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHc-----CCC-------CEEEEcCCCC
Confidence 456799999999999999988765 253 7999998843
No 299
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=71.71 E-value=3.3 Score=43.44 Aligned_cols=35 Identities=23% Similarity=0.227 Sum_probs=28.8
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
.+.+|||+|||.||++.|..|.+ .|+ ++.++|+..
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~-----~g~-------~v~iiE~~~ 42 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQ-----AGM-------KVLGIEAGE 42 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 45789999999999999998865 253 589999874
No 300
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=71.59 E-value=3.6 Score=34.27 Aligned_cols=34 Identities=21% Similarity=0.447 Sum_probs=26.7
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
+..+|+|+|+|..|..+|+.+... |. +++++|++
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~-----g~-------~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAA-----GK-------KVLAVDKS 38 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEECC
Confidence 346899999999999999988652 53 68888873
No 301
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=71.54 E-value=4.6 Score=39.56 Aligned_cols=40 Identities=20% Similarity=0.154 Sum_probs=25.5
Q ss_pred HHhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcCC
Q 012553 404 LDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLWL 447 (461)
Q Consensus 404 ~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Lsn 447 (461)
...++..|||++||..+.. .+ ...-.|+....|+|.=-+|
T Consensus 85 ~~~l~~~~PDvVi~~g~~~-s~---p~~laA~~~~iP~vihe~n 124 (365)
T 3s2u_A 85 LRVIRQLRPVCVLGLGGYV-TG---PGGLAARLNGVPLVIHEQN 124 (365)
T ss_dssp HHHHHHHCCSEEEECSSST-HH---HHHHHHHHTTCCEEEEECS
T ss_pred HHHHHhcCCCEEEEcCCcc-hH---HHHHHHHHcCCCEEEEecc
Confidence 4567888999999987643 11 1222244556899875555
No 302
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=71.28 E-value=2.7 Score=41.91 Aligned_cols=38 Identities=16% Similarity=0.302 Sum_probs=28.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhcc-ceEEEEcCCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETR-KKICLVDSKG 376 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~-~~i~lvDs~G 376 (461)
...|||+|||.||+..|..+.+. |. +.. -++.++|+..
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~-----g~---~~~~~~v~liE~~~ 68 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQER-----AQ---AQGALEVLFLDKQG 68 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHH-----HH---HHCCCCEEEEESCS
T ss_pred cCCEEEECCCHHHHHHHHHHHhc-----cc---ccCcccEEEEecCC
Confidence 34799999999999999998764 30 000 3788888765
No 303
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=71.28 E-value=3.1 Score=41.68 Aligned_cols=36 Identities=22% Similarity=0.379 Sum_probs=28.4
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
...+|+|+|||.||+..|..|.. .|.. .++.++|+.
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~-----~G~~-----~~V~v~E~~ 40 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLA-----EKAF-----DQVTLFERR 40 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT-----TTCC-----SEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHh-----cCCC-----CCeEEEecC
Confidence 34689999999999999998864 2531 278899886
No 304
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=71.27 E-value=3.3 Score=38.76 Aligned_cols=32 Identities=22% Similarity=0.350 Sum_probs=24.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
=-|+|+|||+||+..|..+.+ .|+ ++.++|+.
T Consensus 7 yDvvIIG~GpAGl~aA~~l~~-----~g~-------~V~liE~~ 38 (312)
T 4gcm_A 7 FDIAIIGAGPAGMTAAVYASR-----ANL-------KTVMIERG 38 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 357999999999999977654 353 68888864
No 305
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=71.11 E-value=12 Score=34.96 Aligned_cols=95 Identities=13% Similarity=0.134 Sum_probs=53.9
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhcccC
Q 012553 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (461)
Q Consensus 333 riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vk 411 (461)
+|+|.|| |-.|..+++.|++. | .++.+++.. ..+.+.+...-..+.-+... .++.++++.
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~~-----g--------~~v~~~~~~---~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~-- 63 (313)
T 3ehe_A 3 LIVVTGGAGFIGSHVVDKLSES-----N--------EIVVIDNLS---SGNEEFVNEAARLVKADLAA-DDIKDYLKG-- 63 (313)
T ss_dssp CEEEETTTSHHHHHHHHHHTTT-----S--------CEEEECCCS---SCCGGGSCTTEEEECCCTTT-SCCHHHHTT--
T ss_pred EEEEECCCchHHHHHHHHHHhC-----C--------CEEEEEcCC---CCChhhcCCCcEEEECcCCh-HHHHHHhcC--
Confidence 7899997 88888888877532 3 344444321 11111111111111112233 678888885
Q ss_pred CcEEEeccCCCCC-C---------------CHHHHHHHhcCCCCcEEEEcC
Q 012553 412 PTILIGSSGVGRT-F---------------TKEVIEAMASFNEVVFQALLW 446 (461)
Q Consensus 412 ptvLIG~S~~~g~-F---------------t~evv~~Ma~~~erPIIF~Ls 446 (461)
+|++|-+.+.... . |..++++|.+..-+.|||.=|
T Consensus 64 ~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS 114 (313)
T 3ehe_A 64 AEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTST 114 (313)
T ss_dssp CSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCc
Confidence 9999988775421 1 234777887766678888644
No 306
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=70.76 E-value=3.9 Score=41.06 Aligned_cols=33 Identities=21% Similarity=0.255 Sum_probs=27.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
+.+|+|+|||.||+..|..+.+. |. ++.++|+.
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~-----g~-------~V~liE~~ 38 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQL-----GF-------KTTCIEKR 38 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEEECS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 45799999999999999887653 53 78999987
No 307
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=70.71 E-value=4.7 Score=37.66 Aligned_cols=87 Identities=11% Similarity=0.080 Sum_probs=54.9
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhcc
Q 012553 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (461)
Q Consensus 331 d~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~ 409 (461)
..+|+|.|| |-.|..+++.|+. .|. +++++++. ...| +. ...++.++++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~-----~g~-------~v~~~~r~-----~~~D-~~-----------d~~~~~~~~~~ 53 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQ-----RGD-------VELVLRTR-----DELN-LL-----------DSRAVHDFFAS 53 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTT-----CTT-------EEEECCCT-----TTCC-TT-----------CHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHh-----CCC-------eEEEEecC-----ccCC-cc-----------CHHHHHHHHHh
Confidence 468999996 8888888888754 242 46666543 1111 21 11347777875
Q ss_pred cCCcEEEeccCCCCC-----------------CCHHHHHHHhcCCCCcEEEEcC
Q 012553 410 IKPTILIGSSGVGRT-----------------FTKEVIEAMASFNEVVFQALLW 446 (461)
Q Consensus 410 vkptvLIG~S~~~g~-----------------Ft~evv~~Ma~~~erPIIF~Ls 446 (461)
+++|++|=+.+..+. -|..+++++.+..-+.+||.=|
T Consensus 54 ~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 107 (321)
T 1e6u_A 54 ERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGS 107 (321)
T ss_dssp HCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 679999988775531 2345677776655567777543
No 308
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=70.70 E-value=4.2 Score=40.41 Aligned_cols=39 Identities=18% Similarity=0.168 Sum_probs=30.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccc
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIV 379 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~ 379 (461)
..+|||+|||.||+..|..+.+. |. ..+|.++|+..-+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-----~~~V~lie~~~~~~ 45 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQA-----GY-----QGLITVVGDEAERP 45 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHH-----TC-----CSCEEEEESSCSCC
T ss_pred CCcEEEECChHHHHHHHHHHHcc-----CC-----CCeEEEEECCCCCc
Confidence 45799999999999999988753 53 13688999876443
No 309
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=70.56 E-value=4.3 Score=39.58 Aligned_cols=32 Identities=16% Similarity=0.222 Sum_probs=26.2
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 333 riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
+|+|+|||.||+.+|-.|.+. | .++.++++..
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G-------~~V~vlE~~~ 33 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKA-----G-------HEVEVFERLP 33 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----T-------CEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHhC-----C-------CceEEEeCCC
Confidence 699999999999999988653 5 3688888764
No 310
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=70.46 E-value=3.8 Score=40.79 Aligned_cols=35 Identities=20% Similarity=0.283 Sum_probs=27.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
.+|||+|||.||+..|..|... | ..-+|.++|+.-
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~-----~-----~g~~Vtlie~~~ 37 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNL-----M-----PDLKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----C-----TTCEEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHcC-----C-----CCCeEEEECCCC
Confidence 5899999999999999988762 1 123788888764
No 311
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=70.29 E-value=3.7 Score=41.66 Aligned_cols=33 Identities=30% Similarity=0.549 Sum_probs=27.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
+.+|+|+|||+||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAA-----FG-------KRVALIESK 36 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CC-------CcEEEEcCC
Confidence 4689999999999999998865 25 379999986
No 312
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=70.28 E-value=8 Score=34.27 Aligned_cols=94 Identities=15% Similarity=0.152 Sum_probs=57.2
Q ss_pred eEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcc-ccCC-CCCHHHhhcc
Q 012553 333 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEP-VNNLLDAVKV 409 (461)
Q Consensus 333 riv~~G-AGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~-~~~L~eaV~~ 409 (461)
||+|.| +|-.|..+++.|++ .| -++++++++.- +...+ .+..+.. +... ..++.+++++
T Consensus 2 ~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~~----~~~~~--~~~~~~~~D~~d~~~~~~~~~~~ 63 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLST-----TD-------YQIYAGARKVE----QVPQY--NNVKAVHFDVDWTPEEMAKQLHG 63 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTT-----SS-------CEEEEEESSGG----GSCCC--TTEEEEECCTTSCHHHHHTTTTT
T ss_pred eEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCcc----chhhc--CCceEEEecccCCHHHHHHHHcC
Confidence 789999 47788888877753 24 37888887531 11111 1111111 2222 2357777775
Q ss_pred cCCcEEEeccCCCCC--------CCHHHHHHHhcCCCCcEEEEcC
Q 012553 410 IKPTILIGSSGVGRT--------FTKEVIEAMASFNEVVFQALLW 446 (461)
Q Consensus 410 vkptvLIG~S~~~g~--------Ft~evv~~Ma~~~erPIIF~Ls 446 (461)
+|++|=+.+.... -+..++++|.+..-+.|||.=|
T Consensus 64 --~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 64 --MDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp --CSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred --CCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 9999987765421 1567899998776667887544
No 313
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=70.11 E-value=8.1 Score=37.44 Aligned_cols=102 Identities=13% Similarity=0.084 Sum_probs=58.5
Q ss_pred CcccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCC-hhhhhhcc-ccCCCCCHH
Q 012553 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAH-EHEPVNNLL 404 (461)
Q Consensus 328 ~l~d~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~-~~k~~fA~-~~~~~~~L~ 404 (461)
+++..+|+|.|| |-.|..+++.|++. | ..+++.+|+..- ...+.+. ..+..+.. +.....++.
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~-----g------~~~V~~~~r~~~---~~~~~l~~~~~v~~~~~Dl~d~~~l~ 94 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLEL-----G------VNQVHVVDNLLS---AEKINVPDHPAVRFSETSITDDALLA 94 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHT-----T------CSEEEEECCCTT---CCGGGSCCCTTEEEECSCTTCHHHHH
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHc-----C------CceEEEEECCCC---CchhhccCCCceEEEECCCCCHHHHH
Confidence 466779999997 88898898887652 4 147888876421 1001121 00111111 111123466
Q ss_pred HhhcccCCcEEEeccCCCCC----------------CCHHHHHHHhcC-CCCcEEEEc
Q 012553 405 DAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASF-NEVVFQALL 445 (461)
Q Consensus 405 eaV~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~-~erPIIF~L 445 (461)
++++ ++|++|=+++.... -|..+++++.+. .-+.+||.=
T Consensus 95 ~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~S 150 (377)
T 2q1s_A 95 SLQD--EYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSA 150 (377)
T ss_dssp HCCS--CCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEE
T ss_pred HHhh--CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeC
Confidence 7777 49999988775421 145567777665 455677743
No 314
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=69.98 E-value=3.7 Score=41.47 Aligned_cols=37 Identities=14% Similarity=0.161 Sum_probs=27.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCc
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GL 377 (461)
..+|||+|||.||+..|..|.+. + ...+|.++|+..-
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~-----~-----~g~~Vtvie~~~~ 39 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRL-----D-----PEAHVTMIDQASR 39 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHH-----C-----TTSEEEEECCC--
T ss_pred CCcEEEECCCHHHHHHHHHHHhh-----C-----cCCCEEEEECCCc
Confidence 36899999999999999988653 1 0247888888754
No 315
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=69.83 E-value=3.3 Score=39.30 Aligned_cols=34 Identities=18% Similarity=0.231 Sum_probs=26.7
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
...+|+|+|||.||+..|..+... |+ ++.++|+.
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 46 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARA-----QL-------APLVFEGT 46 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHT-----TC-------CCEEECCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEecC
Confidence 356899999999999999988652 54 57788853
No 316
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=69.77 E-value=3.7 Score=43.15 Aligned_cols=35 Identities=14% Similarity=0.145 Sum_probs=28.6
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~ 54 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRS-----QGL-------TVRAFEAAS 54 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECchHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 35789999999999999998865 253 788999854
No 317
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=69.74 E-value=3.5 Score=38.22 Aligned_cols=32 Identities=25% Similarity=0.340 Sum_probs=24.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.+|+|+|||.||+..|..+.+ .|. ++.+++.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~li~~~ 33 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSAR-----KGI-------RTGLMGER 33 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 479999999999999988764 253 56677653
No 318
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=69.67 E-value=3.5 Score=41.78 Aligned_cols=35 Identities=20% Similarity=0.302 Sum_probs=27.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCc
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GL 377 (461)
+.+|+|+|||.||+..|..+.+. |. ++.++|+..-
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~-----G~-------~V~llEk~~~ 61 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKR-----GR-------RVLVIDHARA 61 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-----CC-------cEEEEeCCCC
Confidence 45899999999999999887652 53 6888888653
No 319
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=69.63 E-value=4.6 Score=39.68 Aligned_cols=32 Identities=22% Similarity=0.382 Sum_probs=26.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 333 riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
+|+|+|||.||+.+|-.|.+. | .++.++|+..
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G-------~~V~vlE~~~ 33 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARN-----G-------HEIIVLEKSA 33 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-----T-------CEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEeCCC
Confidence 799999999999999988653 5 3688888764
No 320
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=69.62 E-value=3.6 Score=41.83 Aligned_cols=35 Identities=29% Similarity=0.393 Sum_probs=28.4
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
.+.+|+|+|||.||+..|..+.+. | .++.++|+.-
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~-----g-------~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASY-----G-------AKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-----S-------CCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHC-----C-------CcEEEEeCCC
Confidence 356899999999999999988652 5 3699999863
No 321
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=69.53 E-value=5.9 Score=35.87 Aligned_cols=101 Identities=16% Similarity=0.078 Sum_probs=58.8
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcc-ccCCCCCHHHh
Q 012553 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA 406 (461)
Q Consensus 329 l~d~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~ea 406 (461)
..-.+|+|.|| |-.|..+++.|+. .| .-++++++++. ++...+......+.. +.....++.++
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~-----~G------~~~V~~~~R~~----~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 85 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLAD-----KQ------TIKQTLFARQP----AKIHKPYPTNSQIIMGDVLNHAALKQA 85 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTT-----CT------TEEEEEEESSG----GGSCSSCCTTEEEEECCTTCHHHHHHH
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHh-----CC------CceEEEEEcCh----hhhcccccCCcEEEEecCCCHHHHHHH
Confidence 34468999995 8888888887754 24 13677777642 111111111111111 22222457788
Q ss_pred hcccCCcEEEeccCCCCC--CCHHHHHHHhcCCCCcEEEEcC
Q 012553 407 VKVIKPTILIGSSGVGRT--FTKEVIEAMASFNEVVFQALLW 446 (461)
Q Consensus 407 V~~vkptvLIG~S~~~g~--Ft~evv~~Ma~~~erPIIF~Ls 446 (461)
++. .|++|=..+.... -++.+++.|.+..-+-|||.=|
T Consensus 86 ~~~--~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS 125 (236)
T 3qvo_A 86 MQG--QDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLS 125 (236)
T ss_dssp HTT--CSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hcC--CCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEec
Confidence 886 7999966554322 2577899998766566777544
No 322
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=69.53 E-value=6.1 Score=36.50 Aligned_cols=95 Identities=11% Similarity=0.017 Sum_probs=56.7
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcc-ccCCCCCHHHhhccc
Q 012553 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 410 (461)
Q Consensus 333 riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~v 410 (461)
||+|.|| |-.|..+++.+... .| .+++.++++.- +...+.+....+.. +-....+|.+++++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~R~~~----~~~~~~~~~v~~~~~D~~d~~~l~~~~~~- 65 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIAN----HI-------DHFHIGVRNVE----KVPDDWRGKVSVRQLDYFNQESMVEAFKG- 65 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHT----TC-------TTEEEEESSGG----GSCGGGBTTBEEEECCTTCHHHHHHHTTT-
T ss_pred EEEEEcCCchHHHHHHHHHhhC----CC-------CcEEEEECCHH----HHHHhhhCCCEEEEcCCCCHHHHHHHHhC-
Confidence 6899996 88999998886431 13 35777766421 11111111111111 11222468888886
Q ss_pred CCcEEEeccCCCC------CCCHHHHHHHhcCCCCcEEEE
Q 012553 411 KPTILIGSSGVGR------TFTKEVIEAMASFNEVVFQAL 444 (461)
Q Consensus 411 kptvLIG~S~~~g------~Ft~evv~~Ma~~~erPIIF~ 444 (461)
+|++|=+++... .-++.++++|.+..-+.|||.
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~ 104 (289)
T 3e48_A 66 -MDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFI 104 (289)
T ss_dssp -CSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred -CCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEE
Confidence 899998776532 124678888887766778875
No 323
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=69.43 E-value=3.9 Score=42.40 Aligned_cols=75 Identities=19% Similarity=0.184 Sum_probs=43.5
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccc-cCCCCCHHH
Q 012553 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLD 405 (461)
Q Consensus 327 ~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~-~~~~~~L~e 405 (461)
..|...|++|+|.+.-..++++.+.+ .|+.. +.+.-.. ..+.+... +...- ..+...+++
T Consensus 309 ~~l~Gkrv~i~~~~~~~~~l~~~L~e-----lGm~v------v~~~~~~------~~~~~~~~--~~~~v~~~D~~~le~ 369 (458)
T 3pdi_B 309 FMLSSARTAIAADPDLLLGFDALLRS-----MGAHT------VAAVVPA------RAAALVDS--PLPSVRVGDLEDLEH 369 (458)
T ss_dssp HHHTTCEEEEECCHHHHHHHHHHHHT-----TTCEE------EEEEESS------CCSCCTTT--TSSCEEESHHHHHHH
T ss_pred HhcCCCEEEEECCcHHHHHHHHHHHH-----CCCEE------EEEEECC------CChhhhhC--ccCcEEeCCHHHHHH
Confidence 45778999999999999999998843 47632 1111111 11111110 00000 011124777
Q ss_pred hhcccCCcEEEeccC
Q 012553 406 AVKVIKPTILIGSSG 420 (461)
Q Consensus 406 aV~~vkptvLIG~S~ 420 (461)
.++..+||++||-|-
T Consensus 370 ~i~~~~pDllig~~~ 384 (458)
T 3pdi_B 370 AARAGQAQLVIGNSH 384 (458)
T ss_dssp HHHHHTCSEEEECTT
T ss_pred HHHhcCCCEEEEChh
Confidence 888899999999654
No 324
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=69.39 E-value=4.9 Score=40.86 Aligned_cols=64 Identities=13% Similarity=0.183 Sum_probs=28.2
Q ss_pred ccCCCchhHHHHHHHHHHHHH---hCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCc
Q 012553 304 NDDIQGTASVVLAGVVAALKL---IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (461)
Q Consensus 304 nDDiQGTaaV~LAgll~Alk~---~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GL 377 (461)
|...||-|+.+.---+.--.. ...+....+|||+|||.||+..|..+.+. + ...++.++|+...
T Consensus 6 ~~~~~~~~~~~~np~~g~~~~~~~~~~~~~~~dvvIIG~G~aGl~aA~~l~~~-----~-----~g~~V~lie~~~~ 72 (480)
T 3cgb_A 6 HHHHHGMASMTGGQQMGRTLYDDDDKDRWGSMNYVIIGGDAAGMSAAMQIVRN-----D-----ENANVVTLEKGEI 72 (480)
T ss_dssp -------------------------------CEEEEECCSHHHHHHHHHHHHH-----C-----TTCEEEEECSSSC
T ss_pred cccccccccccchhhhcccccCCCCcCccccceEEEECCCHHHHHHHHHHHhh-----C-----cCCcEEEEECCCC
Confidence 344567777665444432211 11112235899999999999999988653 1 1247999998754
No 325
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=69.08 E-value=4.1 Score=41.09 Aligned_cols=34 Identities=21% Similarity=0.246 Sum_probs=27.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
+.+|+|+|||.||+..|..+.+. |. ++.++|+..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~-----g~-------~V~lie~~~ 35 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQL-----GM-------KTACVEKRG 35 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeCCC
Confidence 35799999999999999877642 53 789999873
No 326
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=69.08 E-value=8.6 Score=36.00 Aligned_cols=98 Identities=14% Similarity=0.135 Sum_probs=56.3
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcc-ccCCCCCHHHhhcc
Q 012553 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 409 (461)
Q Consensus 332 ~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~ 409 (461)
.+|+|.|| |-.|..+++.|++. | -+++.+|+.- ....+.+.. ...+.. +.....++.++++.
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~ 65 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDE-----G-------LSVVVVDNLQ---TGHEDAITE-GAKFYNGDLRDKAFLRDVFTQ 65 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEECCS---SCCGGGSCT-TSEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHhC-----C-------CEEEEEeCCC---cCchhhcCC-CcEEEECCCCCHHHHHHHHhh
Confidence 37899986 88888888887652 4 3678777631 110011211 111111 11122357777875
Q ss_pred cCCcEEEeccCCCCC----------------CCHHHHHHHhcCCCCcEEEEc
Q 012553 410 IKPTILIGSSGVGRT----------------FTKEVIEAMASFNEVVFQALL 445 (461)
Q Consensus 410 vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIF~L 445 (461)
.++|++|=+.+.... -|..+++++.+..-+.+||.=
T Consensus 66 ~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~S 117 (330)
T 2c20_A 66 ENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSS 117 (330)
T ss_dssp SCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred cCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeC
Confidence 569999988775421 134567777665556788753
No 327
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=69.04 E-value=3.4 Score=42.01 Aligned_cols=37 Identities=22% Similarity=0.396 Sum_probs=26.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCc
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GL 377 (461)
.+|||+|||.||...|-.|..... .|+ ++.++|+.-.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~--~G~-------~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFD--DRI-------DVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHG--GGS-------EEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcC--CCC-------EEEEEecCCC
Confidence 479999999999999998876321 143 7889998644
No 328
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=68.98 E-value=3.8 Score=42.58 Aligned_cols=38 Identities=21% Similarity=0.374 Sum_probs=29.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCc
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GL 377 (461)
..+|||+|||.||...|-.|..... .| -+|.++|+.-.
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~--~G-------~~V~liE~~~~ 62 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQ--GT-------ADITLLQAPDI 62 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTT--TS-------SEEEEEECCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcC--CC-------CcEEEEeCCCC
Confidence 4689999999999999998876320 14 37999998654
No 329
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=68.94 E-value=3.8 Score=41.51 Aligned_cols=34 Identities=21% Similarity=0.216 Sum_probs=27.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
+.+|||+|||+||+..|..+.+. | .++.++|+.-
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~-----g-------~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQL-----G-------LKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-----C-------CeEEEEeCCC
Confidence 56899999999999999988542 4 3799999863
No 330
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=68.72 E-value=4.1 Score=40.83 Aligned_cols=32 Identities=19% Similarity=0.393 Sum_probs=26.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.+|+|+|||.||+..|-.|... |+ ++.++|++
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~-----G~-------~V~viE~~ 54 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQH-----DV-------DVTVYTDR 54 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHT-----TC-------EEEEEESC
T ss_pred CCEEEECCcHHHHHHHHHHHHC-----CC-------eEEEEcCC
Confidence 5799999999999999888653 64 67788765
No 331
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=68.67 E-value=3.4 Score=38.30 Aligned_cols=31 Identities=16% Similarity=0.251 Sum_probs=23.9
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 333 riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.|+|+|||+||+..|..+.. .|+ ++.++|+.
T Consensus 6 DvvIIG~GpAGl~AA~~la~-----~g~-------~v~liE~~ 36 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGR-----SSL-------KPVMYEGF 36 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred cEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 58999999999999876654 354 57778864
No 332
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=68.67 E-value=6.5 Score=36.01 Aligned_cols=91 Identities=12% Similarity=0.119 Sum_probs=54.9
Q ss_pred CcccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHh
Q 012553 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (461)
Q Consensus 328 ~l~d~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~ea 406 (461)
.++..+|+|.|| |-.|..+++.|++. |... ..... + +...+ -+.....++.++
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~~-----g~~~---~~~~~-----~---------~~~~~----~D~~d~~~~~~~ 56 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVADG-----AGLP---GEDWV-----F---------VSSKD----ADLTDTAQTRAL 56 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHTT-----TCCT---TCEEE-----E---------CCTTT----CCTTSHHHHHHH
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhc-----CCcc---ccccc-----c---------cCcee----cccCCHHHHHHH
Confidence 356789999996 88999998887652 5300 00000 0 00000 011112357888
Q ss_pred hcccCCcEEEeccCCCCC-----------------CCHHHHHHHhcCCCCcEEEE
Q 012553 407 VKVIKPTILIGSSGVGRT-----------------FTKEVIEAMASFNEVVFQAL 444 (461)
Q Consensus 407 V~~vkptvLIG~S~~~g~-----------------Ft~evv~~Ma~~~erPIIF~ 444 (461)
++..++|++|=+.+..+. -|..+++++.+..-+.+||.
T Consensus 57 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~ 111 (319)
T 4b8w_A 57 FEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSC 111 (319)
T ss_dssp HHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEE
Confidence 888889999988776431 12346888877666678884
No 333
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=68.59 E-value=16 Score=31.84 Aligned_cols=91 Identities=10% Similarity=0.121 Sum_probs=54.2
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChh--hhhhcc-ccCCCCCHHHhhc
Q 012553 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF--KKPWAH-EHEPVNNLLDAVK 408 (461)
Q Consensus 333 riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~--k~~fA~-~~~~~~~L~eaV~ 408 (461)
||+|.|| |-.|..+++.|++. | .+++.++++. +.+... ...+.. +.....+ ++++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~R~~-------~~~~~~~~~~~~~~~D~~d~~~--~~~~ 60 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNR-----G-------HEVTAIVRNA-------GKITQTHKDINILQKDIFDLTL--SDLS 60 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEESCS-------HHHHHHCSSSEEEECCGGGCCH--HHHT
T ss_pred eEEEEcCCchhHHHHHHHHHhC-----C-------CEEEEEEcCc-------hhhhhccCCCeEEeccccChhh--hhhc
Confidence 7999996 88899998888652 5 3688887741 111110 001111 1111111 6776
Q ss_pred ccCCcEEEeccCCCCC-------CCHHHHHHHhcCCCCcEEEEcC
Q 012553 409 VIKPTILIGSSGVGRT-------FTKEVIEAMASFNEVVFQALLW 446 (461)
Q Consensus 409 ~vkptvLIG~S~~~g~-------Ft~evv~~Ma~~~erPIIF~Ls 446 (461)
+ +|++|=+.+.... .+..++++|.+.....+||.-|
T Consensus 61 ~--~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 61 D--QNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp T--CSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred C--CCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence 6 8999987765422 2367888888765566777644
No 334
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=68.45 E-value=4.1 Score=41.42 Aligned_cols=34 Identities=21% Similarity=0.296 Sum_probs=27.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
+.+|+|+|||.||+..|..+.+. | .++.++|++.
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~-----G-------~~V~liEk~~ 58 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQL-----G-------MKVAVVEKRS 58 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEecCC
Confidence 35799999999999999888652 5 3689999754
No 335
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=68.43 E-value=2.2 Score=44.31 Aligned_cols=32 Identities=19% Similarity=0.369 Sum_probs=25.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.||||+|+|.||+..|+.|.. .+ -+|.++|++
T Consensus 43 prVVIIGgG~AGl~~A~~L~~-----~~-------~~VtLId~~ 74 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDT-----KK-------YNVSIISPR 74 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCT-----TT-------CEEEEEESS
T ss_pred CCEEEECCcHHHHHHHHHhhh-----CC-------CcEEEECCC
Confidence 489999999999999877632 12 379999986
No 336
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=68.39 E-value=2.6 Score=44.72 Aligned_cols=102 Identities=13% Similarity=0.103 Sum_probs=61.5
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccC---C-----cCCCChhhhhhcc---
Q 012553 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSS---R-----KDSLQHFKKPWAH--- 395 (461)
Q Consensus 327 ~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~---R-----~~~L~~~k~~fA~--- 395 (461)
++|++.||+++|+|..|.-||+.|+.+ |+ ++|.++|.+=+ ..+ | .+++-..|..-+.
T Consensus 28 ~~L~~~~VlvvG~GGlGseiak~La~a-----GV------g~itlvD~D~V-e~sNL~RQ~l~~~~dvG~~Ka~~a~~~l 95 (531)
T 1tt5_A 28 EALESAHVCLINATATGTEILKNLVLP-----GI------GSFTIIDGNQV-SGEDAGNNFFLQRSSIGKNRAEAAMEFL 95 (531)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECCCBB-CHHHHHHCTTCCGGGBTSBHHHHHHHHH
T ss_pred HHHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEEeCCEe-chhhcccCccCChhhcCcHHHHHHHHHH
Confidence 457889999999999999999999864 65 69999997632 111 0 0112112211111
Q ss_pred -ccC-CC------CCHH-------HhhcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEE
Q 012553 396 -EHE-PV------NNLL-------DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQAL 444 (461)
Q Consensus 396 -~~~-~~------~~L~-------eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~ 444 (461)
... .. ..+. +.++. .|++|.++.. .=+.-.|...+.....|+|.+
T Consensus 96 ~~lNp~v~v~~~~~~~~~~~~~~~~~~~~--~DvVi~~~d~--~~~r~~ln~~c~~~~iplI~~ 155 (531)
T 1tt5_A 96 QELNSDVSGSFVEESPENLLDNDPSFFCR--FTVVVATQLP--ESTSLRLADVLWNSQIPLLIC 155 (531)
T ss_dssp HTTCTTSBCCEESSCHHHHHHSCGGGGGG--CSEEEEESCC--HHHHHHHHHHHHHTTCCEEEE
T ss_pred HHhCCCCeEEEeCCCcchhhhhhHHHhcC--CCEEEEeCCC--HHHHHHHHHHHHHcCCCEEEE
Confidence 111 11 1333 33444 7999977542 235556666666677899887
No 337
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=68.38 E-value=15 Score=34.48 Aligned_cols=97 Identities=11% Similarity=-0.001 Sum_probs=59.1
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhh----------cc-ccC
Q 012553 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPW----------AH-EHE 398 (461)
Q Consensus 331 d~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~f----------A~-~~~ 398 (461)
..+|+|.|| |-.|..+++.|++. | -+++++|+.. +......+.+ .. +..
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~-----G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~~Dl~ 65 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAH-----G-------YDVVIADNLV-------NSKREAIARIEKITGKTPAFHETDVS 65 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEECCCS-------SSCTHHHHHHHHHHSCCCEEECCCTT
T ss_pred CcEEEEecCCcHHHHHHHHHHHHC-----C-------CcEEEEecCC-------cchHHHHHHHHhhcCCCceEEEeecC
Confidence 468999996 77888888877652 5 3688887642 1111111111 00 111
Q ss_pred CCCCHHHhhcccCCcEEEeccCCCCC----------------CCHHHHHHHhcCCCCcEEEEcC
Q 012553 399 PVNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEVVFQALLW 446 (461)
Q Consensus 399 ~~~~L~eaV~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIF~Ls 446 (461)
...++.++++..++|++|=+.+.... -|..+++.|.+..-+.|||.=|
T Consensus 66 d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 129 (341)
T 3enk_A 66 DERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSS 129 (341)
T ss_dssp CHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CHHHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 22357788886679999987765421 1446788888776677888533
No 338
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=68.08 E-value=4.3 Score=41.84 Aligned_cols=37 Identities=24% Similarity=0.408 Sum_probs=28.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
..+|||+|||.||...|-.|..... .|+ ++.++|+.-
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~--~G~-------~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQ--QQA-------NITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCC--SSC-------EEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcC--CCC-------EEEEECCCC
Confidence 4689999999999999998865210 243 688998854
No 339
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=68.03 E-value=4.6 Score=36.97 Aligned_cols=38 Identities=24% Similarity=0.229 Sum_probs=27.5
Q ss_pred CCCcccceEEEeCcc---hHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 326 GGTLAEHRFLFLGAG---EAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 326 g~~l~d~riv~~GAG---sAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
..++++.++||.||+ -.|.++|+.+++ .|. +++++|+.
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~-----~G~-------~V~~~~r~ 49 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACKR-----EGA-------ELAFTYVG 49 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHH-----cCC-------CEEEEecc
Confidence 356889999999984 456667777654 252 68888875
No 340
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=67.98 E-value=3 Score=39.78 Aligned_cols=34 Identities=24% Similarity=0.334 Sum_probs=25.6
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 333 riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
+|+|+|||.+|+.+|..|.+.. ..| -++.++|+.
T Consensus 3 dV~IIGaG~aGl~~A~~L~~~~--~~G-------~~V~v~Ek~ 36 (342)
T 3qj4_A 3 QVLIVGAGMTGSLCAALLRRQT--SGP-------LYLAVWDKA 36 (342)
T ss_dssp EEEEECCSHHHHHHHHHHHSCC---CC-------EEEEEECSS
T ss_pred cEEEECCcHHHHHHHHHHHhhc--cCC-------ceEEEEECC
Confidence 7999999999999999886410 024 368888875
No 341
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=67.95 E-value=5.3 Score=42.88 Aligned_cols=34 Identities=24% Similarity=0.449 Sum_probs=28.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
..+|||+|||.||+..|..+... |. ++.++|+..
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~-----G~-------~V~liE~~~ 424 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVR-----GY-------DVVLAEAGR 424 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecCC
Confidence 46899999999999999988763 53 699999863
No 342
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=67.90 E-value=4.3 Score=40.72 Aligned_cols=33 Identities=27% Similarity=0.283 Sum_probs=26.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
-+|+|+|||.||+..|..+.+. |. ++.++|+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~-----g~-------~V~lie~~~ 34 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQL-----GM-------KVGVVEKEK 34 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSS
T ss_pred CCEEEECCChhHHHHHHHHHHC-----CC-------eEEEEeCCC
Confidence 4799999999999999877642 53 789999873
No 343
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=67.88 E-value=4.2 Score=40.11 Aligned_cols=37 Identities=24% Similarity=0.316 Sum_probs=29.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCcc
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi 378 (461)
+..|||+|||.||+.+|-.|.+. |. +++.++|+....
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~-----G~------~~V~vlE~~~~~ 42 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARR-----GY------TNVTVLDPYPVP 42 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHT-----TC------CCEEEEESSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHc-----CC------CcEEEEeCCCCC
Confidence 45799999999999999888653 63 279999987654
No 344
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=67.86 E-value=6.5 Score=36.31 Aligned_cols=86 Identities=12% Similarity=0.225 Sum_probs=54.5
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhcccC
Q 012553 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (461)
Q Consensus 333 riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vk 411 (461)
||+|.|| |-.|..+++.|+ . | -+++.+|+..-... .| + ....++.+++++.+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~-----g-------~~V~~~~r~~~~~~--~D-~-----------~d~~~~~~~~~~~~ 54 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-P-----V-------GNLIALDVHSKEFC--GD-F-----------SNPKGVAETVRKLR 54 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-T-----T-------SEEEEECTTCSSSC--CC-T-----------TCHHHHHHHHHHHC
T ss_pred eEEEECCCCHHHHHHHHHhh-c-----C-------CeEEEecccccccc--cc-C-----------CCHHHHHHHHHhcC
Confidence 7899998 888888888775 2 4 36888877531110 01 1 11235777888778
Q ss_pred CcEEEeccCCCCC----------------CCHHHHHHHhcCCCCcEEEEcC
Q 012553 412 PTILIGSSGVGRT----------------FTKEVIEAMASFNEVVFQALLW 446 (461)
Q Consensus 412 ptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIF~Ls 446 (461)
+|++|=+.+.... -|..+++++.+..- .+||.=|
T Consensus 55 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 104 (299)
T 1n2s_A 55 PDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYST 104 (299)
T ss_dssp CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEE
T ss_pred CCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEec
Confidence 9999988775431 14567777766543 4777543
No 345
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=67.84 E-value=3.4 Score=42.66 Aligned_cols=32 Identities=19% Similarity=0.175 Sum_probs=26.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.||.|+|+|..|..+|..+... | .+++++|.+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~-----G-------~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL-----G-------ANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhc-----C-------CEEEEEECC
Confidence 5899999999999999988753 5 368888874
No 346
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=67.66 E-value=4.6 Score=36.85 Aligned_cols=33 Identities=24% Similarity=0.368 Sum_probs=26.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
+-.|+|+|||.||+..|..+.+. |+ ++.++++.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~-----g~-------~v~lie~~ 35 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQK-----GV-------RVGLLTQS 35 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEecC
Confidence 45799999999999999888652 53 68888875
No 347
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=67.60 E-value=4.9 Score=41.66 Aligned_cols=35 Identities=20% Similarity=0.255 Sum_probs=28.2
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
.+.+|||+|||.||+..|..|.+. |+ ++.++|+..
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~-----G~-------~v~iiE~~~ 49 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLREL-----GR-------SVHVIETAG 49 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHhC-----CC-------CEEEEeCCC
Confidence 456899999999999999988753 64 688888754
No 348
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=67.59 E-value=17 Score=36.50 Aligned_cols=129 Identities=6% Similarity=0.010 Sum_probs=80.7
Q ss_pred HhcCCCeeeeeecCCcccHHHHHHHHcCCCceec--cCCCchhHHHHHHHHHHHHHhC------CCcccceEEEeCcchH
Q 012553 271 QNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIG------GTLAEHRFLFLGAGEA 342 (461)
Q Consensus 271 ~~fGp~~lIq~EDf~~~~af~iL~ryr~~~~~Fn--DDiQGTaaV~LAgll~Alk~~g------~~l~d~riv~~GAGsA 342 (461)
.+| .++ |-+--++ +.+.+.+.+|- ++||.| || +-=-.=+||=++.-.+..| +++++.||+++|-+.-
T Consensus 98 s~~-~D~-iviR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~Ti~e~~g~~~~~~~~l~gl~va~vGD~~~ 172 (328)
T 3grf_A 98 SRM-VDI-CTARLAT-KEMMREMAQHA-SVPCINALDD-FGHPLQMVCDFMTIKEKFTAAGEFSNGFKGIKFAYCGDSMN 172 (328)
T ss_dssp TTT-CSE-EEEECSS-HHHHHHHHHHC-SSCEEESSCS-SCCHHHHHHHHHHHHHHHHHTTCCTTTGGGCCEEEESCCSS
T ss_pred Hhh-CCE-EEEecCC-hhHHHHHHHhC-CCCEEeCCCC-CCCcHHHHHHHHHHHHHhCCccccccccCCcEEEEeCCCCc
Confidence 456 444 3355554 34555566664 689998 55 3334456677666666666 3799999999999852
Q ss_pred HHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccc---c---CCCCCHHHhhcccCCcEEE
Q 012553 343 GTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE---H---EPVNNLLDAVKVIKPTILI 416 (461)
Q Consensus 343 giGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~---~---~~~~~L~eaV~~vkptvLI 416 (461)
.+|+-++.++.+ .|+ ++.++-.+|+..+-..+ +.+.-+.+|.. . ....++.|||++ +||+.
T Consensus 173 --~va~Sl~~~~~~-~G~-------~v~~~~P~~~~~~p~~~-~~~~~~~~~~~~~~g~~v~~~~d~~eav~~--aDvvy 239 (328)
T 3grf_A 173 --NVTYDLMRGCAL-LGM-------ECHVCCPDHKDFKPIKE-VIDECEEIIAKHGTGGSIKIFHDCKKGCEG--VDVVY 239 (328)
T ss_dssp --HHHHHHHHHHHH-HTC-------EEEEECCSSGGGSCCHH-HHHHHHHHHHHHTCCCEEEEESSHHHHHTT--CSEEE
T ss_pred --chHHHHHHHHHH-cCC-------EEEEECChHhhhCCCHH-HHHHHHHHHhhccCCCeEEEEcCHHHHhcC--CCEEE
Confidence 477877777765 364 78999888885321111 21122233322 1 123689999998 99997
Q ss_pred e
Q 012553 417 G 417 (461)
Q Consensus 417 G 417 (461)
-
T Consensus 240 t 240 (328)
T 3grf_A 240 T 240 (328)
T ss_dssp E
T ss_pred e
Confidence 4
No 349
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=67.55 E-value=4.1 Score=42.08 Aligned_cols=35 Identities=23% Similarity=0.253 Sum_probs=28.6
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
.+.+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~-----G-------~~V~liE~~~ 76 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAM-----G-------GRQLIVDRWP 76 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEeCCC
Confidence 356899999999999999988653 5 3689999875
No 350
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=67.55 E-value=4.3 Score=40.97 Aligned_cols=34 Identities=18% Similarity=0.165 Sum_probs=27.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
+.+|||+|||.||+..|..+.+. |. ++.++|+..
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~-----g~-------~V~liE~~~ 39 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQL-----GF-------KTVCIEKNE 39 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCCC
Confidence 45799999999999999888652 53 789999874
No 351
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=67.53 E-value=5.7 Score=38.44 Aligned_cols=107 Identities=20% Similarity=0.203 Sum_probs=55.7
Q ss_pred CchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCC
Q 012553 308 QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 387 (461)
Q Consensus 308 QGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~ 387 (461)
++.....++.-+.|++-...- .+++|+|.|||..|..++.+... .|. ++++.+|+. ..| ++
T Consensus 143 ~aa~~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~~----~~~---~~ 203 (343)
T 2dq4_A 143 VAAILEPFGNAVHTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRA-----SGA------GPILVSDPN----PYR---LA 203 (343)
T ss_dssp HHTTHHHHHHHHHHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECSC----HHH---HG
T ss_pred HHHhhhHHHHHHHHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC----HHH---HH
Confidence 333333444445666522333 88999999999888877765543 253 368877753 111 11
Q ss_pred hhhhhhccc--cCCCCCHHHhhcc---cCCcEEEeccCCCCCCCHHHHHHHhc
Q 012553 388 HFKKPWAHE--HEPVNNLLDAVKV---IKPTILIGSSGVGRTFTKEVIEAMAS 435 (461)
Q Consensus 388 ~~k~~fA~~--~~~~~~L~eaV~~---vkptvLIG~S~~~g~Ft~evv~~Ma~ 435 (461)
..++. |.. .....++.+.++. -++|++|=+++.. ...++.++.|+.
T Consensus 204 ~~~~l-a~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g~~-~~~~~~~~~l~~ 254 (343)
T 2dq4_A 204 FARPY-ADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGNE-AAIHQGLMALIP 254 (343)
T ss_dssp GGTTT-CSEEECTTTSCHHHHHHHHHSSCEEEEEECSCCH-HHHHHHHHHEEE
T ss_pred HHHHh-HHhccCcCccCHHHHHHHhcCCCCCEEEECCCCH-HHHHHHHHHHhc
Confidence 11111 211 0111345555542 2578887766532 233455565543
No 352
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=67.41 E-value=5.7 Score=40.79 Aligned_cols=37 Identities=14% Similarity=0.247 Sum_probs=28.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCcc
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi 378 (461)
.+|||+|||.||+..|..|... |- .-+|.++|+..-.
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~-----~~-----~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRL-----SE-----TAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CS-----SSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhh-----Cc-----CCCEEEEECCCCc
Confidence 4899999999999999988653 21 2479999987543
No 353
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=67.38 E-value=4.3 Score=40.83 Aligned_cols=33 Identities=27% Similarity=0.269 Sum_probs=26.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
+.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~-----~G~-------~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQ-----LGL-------STAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 4579999999999999987754 253 68899986
No 354
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=66.85 E-value=12 Score=36.79 Aligned_cols=100 Identities=14% Similarity=0.116 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhh
Q 012553 314 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPW 393 (461)
Q Consensus 314 ~LAgll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~f 393 (461)
+....+.|++..+....+++|+|.|||..|..++.+... .| | +++.+|+. .++ +...++.+
T Consensus 171 ~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~-----~G-----a--~Vi~~~~~----~~~---~~~~~~~l 231 (366)
T 1yqd_A 171 AGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKA-----FG-----S--KVTVISTS----PSK---KEEALKNF 231 (366)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TT-----C--EEEEEESC----GGG---HHHHHHTS
T ss_pred hHHHHHHHHHhcCcCCCCCEEEEECCCHHHHHHHHHHHH-----CC-----C--EEEEEeCC----HHH---HHHHHHhc
Confidence 333445667665554478999999999888888766543 25 2 57777753 111 11111111
Q ss_pred -cc---ccCCCCCHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhc
Q 012553 394 -AH---EHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMAS 435 (461)
Q Consensus 394 -A~---~~~~~~~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~ 435 (461)
|. +......+.++.. ++|++|=+++.. ...++.++.|+.
T Consensus 232 Ga~~v~~~~~~~~~~~~~~--~~D~vid~~g~~-~~~~~~~~~l~~ 274 (366)
T 1yqd_A 232 GADSFLVSRDQEQMQAAAG--TLDGIIDTVSAV-HPLLPLFGLLKS 274 (366)
T ss_dssp CCSEEEETTCHHHHHHTTT--CEEEEEECCSSC-CCSHHHHHHEEE
T ss_pred CCceEEeccCHHHHHHhhC--CCCEEEECCCcH-HHHHHHHHHHhc
Confidence 10 0001011233222 478888777644 345777888765
No 355
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=66.75 E-value=5.8 Score=40.69 Aligned_cols=37 Identities=22% Similarity=0.371 Sum_probs=28.9
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
...+|||+|||.||+..|..|... + ...+|.++|+..
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~-----~-----~g~~V~lie~~~ 46 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRAR-----D-----PGARVLIVSEDP 46 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHH-----S-----TTCEEEEEESSS
T ss_pred CcCCEEEECChHHHHHHHHHHHhc-----C-----CCCeEEEEeCCC
Confidence 356899999999999999988653 2 124799999874
No 356
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=66.71 E-value=5 Score=41.31 Aligned_cols=36 Identities=31% Similarity=0.437 Sum_probs=28.3
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCc
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GL 377 (461)
...+|+|+|||.||+..|..+.. .|+ ++.++|+..-
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liEk~~~ 126 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELAL-----LGA-------RVVLVEKRIK 126 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCSS
T ss_pred CCCCEEEECccHHHHHHHHHHHH-----CCC-------eEEEEEeccc
Confidence 35689999999999999988765 263 6888887643
No 357
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=66.60 E-value=16 Score=34.03 Aligned_cols=78 Identities=14% Similarity=0.205 Sum_probs=42.3
Q ss_pred CCCcccceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHH
Q 012553 326 GGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLL 404 (461)
Q Consensus 326 g~~l~d~riv~~GAGs-AgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~ 404 (461)
..+++++++||-||+. .|.++|+.+++ .|. +++++|++.- .+......+.-+.....++.
T Consensus 9 ~~~~~~k~vlVTGas~GIG~aia~~l~~-----~G~-------~V~~~~r~~~-------~~~~~~~~~~~Dv~~~~~v~ 69 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSSGIGLAVVDALVR-----YGA-------KVVSVSLDEK-------SDVNVSDHFKIDVTNEEEVK 69 (269)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHH-----TTC-------EEEEEESCC---------CTTSSEEEECCTTCHHHHH
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHH-----CCC-------EEEEEeCCch-------hccCceeEEEecCCCHHHHH
Confidence 4578899999999853 44455555543 253 6888876421 11111111211222223455
Q ss_pred Hhhccc-----CCcEEEeccCCC
Q 012553 405 DAVKVI-----KPTILIGSSGVG 422 (461)
Q Consensus 405 eaV~~v-----kptvLIG~S~~~ 422 (461)
++++.+ ++|+||=..+..
T Consensus 70 ~~~~~~~~~~g~iD~lv~nAg~~ 92 (269)
T 3vtz_A 70 EAVEKTTKKYGRIDILVNNAGIE 92 (269)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCcC
Confidence 555544 799999766643
No 358
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=66.56 E-value=4.7 Score=41.53 Aligned_cols=34 Identities=21% Similarity=0.390 Sum_probs=26.9
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.+.+|+|+|||.||+..|-.|.. .|+ ++.++|+.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~ 44 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRL-----GGV-------DVMVLEQL 44 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 56789999999999999998865 365 46667654
No 359
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=66.46 E-value=4.7 Score=38.49 Aligned_cols=37 Identities=30% Similarity=0.593 Sum_probs=28.3
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 329 l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
..+.-|+|+|||+||+..|-.+.+. +.|+ ++.++|+.
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~---r~G~-------~V~viEk~ 99 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKN---RPDL-------KVCIIESS 99 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHH---CTTS-------CEEEECSS
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHh---CCCC-------eEEEEECC
Confidence 3466799999999999999888653 1253 68888875
No 360
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=66.30 E-value=5.1 Score=40.03 Aligned_cols=36 Identities=19% Similarity=0.373 Sum_probs=27.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
.+|||+|||.||+..|..|...+. .| -+|.++|+.-
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~--~g-------~~Vtlie~~~ 40 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALG--SG-------HEVTLISAND 40 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHG--GG-------SEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhccCC--Cc-------CEEEEEeCCC
Confidence 589999999999999999876321 12 3678887754
No 361
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=66.22 E-value=5.5 Score=40.58 Aligned_cols=37 Identities=19% Similarity=0.352 Sum_probs=28.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
..+|||+|||.||+..|..+.+. |. ...++.++|+..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~-----g~----~~~~V~lie~~~ 71 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTN-----YG----DANEIVVFDQNS 71 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----HG----GGSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhc-----CC----CCCeEEEEECCC
Confidence 46899999999999999998764 20 124788998864
No 362
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=66.21 E-value=4.2 Score=40.80 Aligned_cols=32 Identities=28% Similarity=0.284 Sum_probs=26.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.+|||+|||.||+..|..+.+. |. ++.++|+.
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~~-----g~-------~V~lie~~ 35 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQL-----GQ-------KVTIVEKG 35 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 4699999999999999887642 53 78999986
No 363
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=66.17 E-value=4 Score=41.11 Aligned_cols=33 Identities=21% Similarity=0.434 Sum_probs=27.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
+.+|+|+|||+||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAM-----YG-------QKCALIEAK 36 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TT-------CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEcCC
Confidence 4689999999999999988764 24 379999986
No 364
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=66.04 E-value=30 Score=34.91 Aligned_cols=128 Identities=19% Similarity=0.239 Sum_probs=77.9
Q ss_pred HhcCCCeeeeeecCCcccHHHHHHHHcCCCceec--cCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHH
Q 012553 271 QNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAE 348 (461)
Q Consensus 271 ~~fGp~~lIq~EDf~~~~af~iL~ryr~~~~~Fn--DDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ 348 (461)
.+| .++++ +--++ +.+.+.+.+|- ++||.| || +-=-.=+||=++.-.+..| +|++.||+++|-| . .+|+
T Consensus 123 s~y-~D~Iv-iR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~TI~E~~G-~l~glkva~vGD~-~--nva~ 193 (340)
T 4ep1_A 123 SHY-IDGIM-IRTFS-HADVEELAKES-SIPVINGLTD-DHHPCQALADLMTIYEETN-TFKGIKLAYVGDG-N--NVCH 193 (340)
T ss_dssp HHH-CSEEE-EECSC-HHHHHHHHHHC-SSCEEEEECS-SCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCC-C--HHHH
T ss_pred HHh-CCEEE-EecCC-hhHHHHHHHhC-CCCEEeCCCC-CCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCC-c--hhHH
Confidence 345 55443 44443 34555556654 689998 44 2223445666666555555 5999999999998 2 3777
Q ss_pred HHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccc-c---CCCCCHHHhhcccCCcEEEeccC
Q 012553 349 LIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-H---EPVNNLLDAVKVIKPTILIGSSG 420 (461)
Q Consensus 349 ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~-~---~~~~~L~eaV~~vkptvLIG~S~ 420 (461)
-++.++.+ .|+ ++.++-.+|+.-.. + +-+.-+.+|.. . ....++.|||++ +||+.-..=
T Consensus 194 Sl~~~~~~-~G~-------~v~~~~P~~~~~~~--~-~~~~~~~~a~~~G~~v~~~~d~~eav~~--aDVvyt~~w 256 (340)
T 4ep1_A 194 SLLLASAK-VGM-------HMTVATPVGYRPNE--E-IVKKALAIAKETGAEIEILHNPELAVNE--ADFIYTDVW 256 (340)
T ss_dssp HHHHHHHH-HTC-------EEEEECCTTCCCCH--H-HHHHHHHHHHHHCCCEEEESCHHHHHTT--CSEEEECCC
T ss_pred HHHHHHHH-cCC-------EEEEECCcccCCCH--H-HHHHHHHHHHHcCCeEEEECCHHHHhCC--CCEEEecCc
Confidence 77777765 364 68888888774321 1 11111223332 1 123689999998 999987653
No 365
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=65.98 E-value=5.3 Score=40.38 Aligned_cols=34 Identities=32% Similarity=0.400 Sum_probs=27.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
+-.|+|+|||.||+..|..+.+ .|+ ++.++|++.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~-----~G~-------~V~liEk~~ 37 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAK-----AKY-------NVLMADPKG 37 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECTTS
T ss_pred cceEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEECCC
Confidence 3579999999999999988864 253 799999655
No 366
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=65.92 E-value=6.9 Score=39.18 Aligned_cols=37 Identities=16% Similarity=0.285 Sum_probs=28.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCc
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GL 377 (461)
..+|||+|||.||+..|..|... +- ..++.++|+..-
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~V~vie~~~~ 39 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRL-----KP-----EWDVKVFEATEW 39 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSSSC
T ss_pred cCcEEEECCcHHHHHHHHHHHHh-----Cc-----CCCEEEEECCCc
Confidence 46899999999999999988653 21 237888888753
No 367
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=65.92 E-value=7 Score=40.89 Aligned_cols=36 Identities=28% Similarity=0.410 Sum_probs=22.3
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 328 ~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
++++.+++|.|||.+|.++|..+... |. +++++++.
T Consensus 361 ~l~~k~vlV~GaGGig~aia~~L~~~-----G~-------~V~i~~R~ 396 (523)
T 2o7s_A 361 PLASKTVVVIGAGGAGKALAYGAKEK-----GA-------KVVIANRT 396 (523)
T ss_dssp -----CEEEECCSHHHHHHHHHHHHH-----CC--------CEEEESS
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEECC
Confidence 57788999999997777777766543 52 57888763
No 368
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=65.91 E-value=5.8 Score=41.27 Aligned_cols=39 Identities=15% Similarity=0.317 Sum_probs=30.1
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCcc
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi 378 (461)
...+|||+|||.||+..|..|... + ..-+|.++|+..-+
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~-----~-----~g~~V~vie~~~~~ 73 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRL-----S-----EEDEIIMVERGEYI 73 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-----C-----SSSEEEEECSSSCS
T ss_pred cCCCEEEECCcHHHHHHHHHHHhh-----C-----cCCCEEEEECCCCc
Confidence 347899999999999999988653 1 02479999987653
No 369
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=65.84 E-value=7.9 Score=35.97 Aligned_cols=29 Identities=21% Similarity=0.345 Sum_probs=23.0
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcC
Q 012553 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (461)
Q Consensus 333 riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs 374 (461)
||.|+|+|..|..+|..+.. |. +++++|+
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~------g~-------~V~~~~~ 31 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR------RF-------PTLVWNR 31 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT------TS-------CEEEECS
T ss_pred eEEEEcccHHHHHHHHHHhC------CC-------eEEEEeC
Confidence 79999999999999988742 42 4777776
No 370
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=65.82 E-value=5.5 Score=40.00 Aligned_cols=36 Identities=22% Similarity=0.321 Sum_probs=28.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCc
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GL 377 (461)
.+|||+|||.||+..|..+.+.- .| .+|.++|+.--
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~---~g-------~~V~vie~~~~ 38 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKY---PQ-------AEISLIDKQAT 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC---SS-------SEEEEECSSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCCC
Confidence 48999999999999999887530 12 47889988653
No 371
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=65.79 E-value=5.7 Score=38.71 Aligned_cols=20 Identities=35% Similarity=0.549 Sum_probs=18.1
Q ss_pred eEEEeCcchHHHHHHHHHHH
Q 012553 333 RFLFLGAGEAGTGIAELIAL 352 (461)
Q Consensus 333 riv~~GAGsAgiGiA~ll~~ 352 (461)
+|+|+|||.||+..|-.+.+
T Consensus 2 dV~IVGaG~aGl~~A~~L~~ 21 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQ 21 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHHHh
Confidence 69999999999999988865
No 372
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=65.71 E-value=5.9 Score=39.74 Aligned_cols=37 Identities=22% Similarity=0.278 Sum_probs=28.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCc
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GL 377 (461)
..+|||+|||.||+..|..+.+ .|. ..+|.++|+..-
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~-----~g~-----~~~V~lie~~~~ 40 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRA-----SGW-----EGNIRLVGDATV 40 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSCCS
T ss_pred CCcEEEEcCHHHHHHHHHHHHc-----cCc-----CCCEEEEECCCC
Confidence 3689999999999999998865 254 237899987643
No 373
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=65.68 E-value=21 Score=34.61 Aligned_cols=99 Identities=16% Similarity=0.075 Sum_probs=57.4
Q ss_pred ccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcc-ccCCCCCHHHhh
Q 012553 330 AEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAV 407 (461)
Q Consensus 330 ~d~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV 407 (461)
+..+|+|.|| |-.|..+++.|+.. | -+++.+|++- .....+......+.. +.....++.+++
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~----~~~~~~~~~~v~~~~~Dl~d~~~~~~~~ 91 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHE-----G-------HYVIASDWKK----NEHMTEDMFCDEFHLVDLRVMENCLKVT 91 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEESSC----CSSSCGGGTCSEEEECCTTSHHHHHHHH
T ss_pred cCCeEEEECCccHHHHHHHHHHHHC-----C-------CeEEEEECCC----ccchhhccCCceEEECCCCCHHHHHHHh
Confidence 3468999998 88888888887652 4 3688888742 111111111111111 111223577788
Q ss_pred cccCCcEEEeccCCCCC--C---------------CHHHHHHHhcCCCCcEEEEcC
Q 012553 408 KVIKPTILIGSSGVGRT--F---------------TKEVIEAMASFNEVVFQALLW 446 (461)
Q Consensus 408 ~~vkptvLIG~S~~~g~--F---------------t~evv~~Ma~~~erPIIF~Ls 446 (461)
++ +|++|=+.+.... + |..+++++.+..-+.|||.=|
T Consensus 92 ~~--~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS 145 (379)
T 2c5a_A 92 EG--VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASS 145 (379)
T ss_dssp TT--CSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CC--CCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 74 9999988775431 1 235667776655567777533
No 374
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=65.60 E-value=12 Score=35.19 Aligned_cols=96 Identities=19% Similarity=0.100 Sum_probs=53.6
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcc-ccCCCCCHHHhhcc
Q 012553 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 409 (461)
Q Consensus 332 ~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~ 409 (461)
.+|+|.|| |-.|..+++.|+.. | .+++.+|++. +..+.+...+..+.. +.....++.+++++
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~ 77 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAA-----G-------HDLVLIHRPS----SQIQRLAYLEPECRVAEMLDHAGLERALRG 77 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT-----T-------CEEEEEECTT----SCGGGGGGGCCEEEECCTTCHHHHHHHTTT
T ss_pred CEEEEECCCcHHHHHHHHHHHHC-----C-------CEEEEEecCh----HhhhhhccCCeEEEEecCCCHHHHHHHHcC
Confidence 48999996 88999998888652 4 3688887742 111112111111111 11122357788875
Q ss_pred cCCcEEEeccCCCCC--------------CCHHHHHHHhcCCCCcEEEEc
Q 012553 410 IKPTILIGSSGVGRT--------------FTKEVIEAMASFNEVVFQALL 445 (461)
Q Consensus 410 vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIF~L 445 (461)
+|++|=+.+..+. -|..+++++.+..-+.|||.=
T Consensus 78 --~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~S 125 (342)
T 2x4g_A 78 --LDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVG 125 (342)
T ss_dssp --CSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEEC
T ss_pred --CCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEC
Confidence 9999987765431 134677777665556677753
No 375
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=65.55 E-value=11 Score=35.26 Aligned_cols=98 Identities=14% Similarity=0.214 Sum_probs=55.0
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcc-ccCCCCCHHHhhccc
Q 012553 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 410 (461)
Q Consensus 333 riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~v 410 (461)
||+|.|| |-.|..+++.|++ .| -+++.+|+.- ....+.+.. ...+.. +.....++.++++..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~ 65 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLA-----RG-------LEVAVLDNLA---TGKRENVPK-GVPFFRVDLRDKEGVERAFREF 65 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEECCCS---SCCGGGSCT-TCCEECCCTTCHHHHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHH-----CC-------CEEEEEECCC---cCchhhccc-CeEEEECCCCCHHHHHHHHHhc
Confidence 6899997 7888888887764 25 2677777621 111011110 111111 111223577778766
Q ss_pred CCcEEEeccCCCCC----------------CCHHHHHHHhcCCCCcEEEEcC
Q 012553 411 KPTILIGSSGVGRT----------------FTKEVIEAMASFNEVVFQALLW 446 (461)
Q Consensus 411 kptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIF~Ls 446 (461)
++|++|=+.+..+. -|..+++++.+..-+.|||.=|
T Consensus 66 ~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS 117 (311)
T 2p5y_A 66 RPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFAST 117 (311)
T ss_dssp CCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 79999988775431 0345667776655567777533
No 376
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=65.50 E-value=4.1 Score=42.72 Aligned_cols=36 Identities=14% Similarity=0.085 Sum_probs=28.2
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
.+.+|||+|||.||+..|..|.. +.|+ ++.++|+..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~----~~G~-------~v~viE~~~ 42 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHH----ELGL-------TTVGFDKAD 42 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH----TTCC-------CEEEEESSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHH----cCCC-------CEEEEECCC
Confidence 35689999999999999988862 1353 688999853
No 377
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=65.47 E-value=4.6 Score=41.33 Aligned_cols=33 Identities=24% Similarity=0.427 Sum_probs=27.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
.+|||+|||+||+..|..+.+. | .++.++|+.-
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~-----g-------~~V~liE~~~ 35 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAARH-----N-------AKVALVEKSR 35 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred cCEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEeCCC
Confidence 5799999999999999988652 4 3699999864
No 378
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=65.43 E-value=4.9 Score=40.58 Aligned_cols=33 Identities=21% Similarity=0.261 Sum_probs=26.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
+.++||+|||+||+..|..+.+. | .++.++|+.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~-----g-------~~V~lie~~ 37 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQL-----G-------IPTVLVEGQ 37 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEccC
Confidence 35799999999999999877653 5 379999983
No 379
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=65.39 E-value=5.4 Score=38.69 Aligned_cols=48 Identities=17% Similarity=0.128 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcC
Q 012553 314 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (461)
Q Consensus 314 ~LAgll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs 374 (461)
.++..+.|++..+ - ..++|+|.|||..|..++.+... .|. ++++.+|+
T Consensus 153 ~~~ta~~~l~~~~-~-~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~ 200 (348)
T 2d8a_A 153 PLGNAVDTVLAGP-I-SGKSVLITGAGPLGLLGIAVAKA-----SGA------YPVIVSEP 200 (348)
T ss_dssp HHHHHHHHHTTSC-C-TTCCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECS
T ss_pred HHHHHHHHHHhcC-C-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 3444456664333 3 88999999999888888776543 253 36777765
No 380
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=65.27 E-value=18 Score=35.20 Aligned_cols=33 Identities=15% Similarity=0.291 Sum_probs=25.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
+++|+|.|||..|..++.++... | | +++.+|+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~-----G-----a--~Vi~~~~~ 213 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY-----G-----L--EVWMANRR 213 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH-----T-----C--EEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----C-----C--EEEEEeCC
Confidence 89999999998888887766432 5 2 78888764
No 381
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=65.26 E-value=5.6 Score=40.11 Aligned_cols=34 Identities=26% Similarity=0.334 Sum_probs=27.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
+.+|+|+|||.||+..|..+.+. |+ ++.++|+..
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~-----G~-------~V~liE~~~ 38 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQL-----GF-------NTACVEKRG 38 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecCC
Confidence 35799999999999999988652 53 799999853
No 382
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=65.20 E-value=5 Score=37.63 Aligned_cols=32 Identities=25% Similarity=0.432 Sum_probs=23.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
--++|+|||+||+..|-.+.. .|+ ++.++|+.
T Consensus 7 yDVvIIGaGpAGlsAA~~lar-----~g~-------~v~lie~~ 38 (304)
T 4fk1_A 7 IDCAVIGAGPAGLNASLVLGR-----ARK-------QIALFDNN 38 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEECS
T ss_pred cCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEeCC
Confidence 358999999999998865543 253 68888874
No 383
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=65.04 E-value=14 Score=36.33 Aligned_cols=57 Identities=25% Similarity=0.289 Sum_probs=37.1
Q ss_pred CCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcC
Q 012553 306 DIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (461)
Q Consensus 306 DiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs 374 (461)
+.++.....++..+.|++..+.+ .+++|+|.|||+.|...+.+... .|. ++++.+|+
T Consensus 159 ~~~aal~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 215 (370)
T 4ej6_A 159 PVHGAFCEPLACCLHGVDLSGIK-AGSTVAILGGGVIGLLTVQLARL-----AGA------TTVILSTR 215 (370)
T ss_dssp TTGGGGHHHHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred HHHHhhhhHHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 44555445566667777665543 56899999999888776655432 363 47777775
No 384
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=64.98 E-value=2.7 Score=42.49 Aligned_cols=86 Identities=20% Similarity=0.303 Sum_probs=50.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcc-----------ccCCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-----------EHEPV 400 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-----------~~~~~ 400 (461)
.||+|+|||-.|..+|+.|.+ .|- .-.+++++|++- ++ +......+.. +....
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~-----~g~----~~~~V~v~~r~~----~~---~~~la~~l~~~~~~~~~~~~~D~~d~ 65 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAM-----NRE----VFSHITLASRTL----SK---CQEIAQSIKAKGYGEIDITTVDADSI 65 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----CTT----TCCEEEEEESCH----HH---HHHHHHHHHHTTCCCCEEEECCTTCH
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC----CceEEEEEECCH----HH---HHHHHHHhhhhcCCceEEEEecCCCH
Confidence 389999999877777777653 231 014788888741 11 2222222211 11122
Q ss_pred CCHHHhhcccCCcEEEeccCCCCCCCHHHHHHHhc
Q 012553 401 NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMAS 435 (461)
Q Consensus 401 ~~L~eaV~~vkptvLIG~S~~~g~Ft~evv~~Ma~ 435 (461)
.++.++++..++|++|=+++.. +..+++++..+
T Consensus 66 ~~l~~~l~~~~~DvVin~ag~~--~~~~v~~a~l~ 98 (405)
T 4ina_A 66 EELVALINEVKPQIVLNIALPY--QDLTIMEACLR 98 (405)
T ss_dssp HHHHHHHHHHCCSEEEECSCGG--GHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCEEEECCCcc--cChHHHHHHHH
Confidence 4688888888899999776532 45566666544
No 385
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=64.96 E-value=4.8 Score=38.10 Aligned_cols=36 Identities=22% Similarity=0.246 Sum_probs=29.4
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 328 ~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
+|++.++||+|+|..|...++.|+.+ | -++.++|.+
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~-----G-------A~VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQE-----G-------AAITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGG-----C-------CCEEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEECCC
Confidence 57889999999999999999988764 4 268888763
No 386
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=64.94 E-value=4.8 Score=41.47 Aligned_cols=35 Identities=20% Similarity=0.383 Sum_probs=26.8
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 329 l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
-.+..|+|+|||.||+..|-.|... |+ ++.++|++
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~-----G~-------~v~vlE~~ 43 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLA-----GV-------EVVVLERL 43 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESC
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEeCC
Confidence 3567899999999999999988653 65 45666654
No 387
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=64.91 E-value=5.1 Score=41.26 Aligned_cols=40 Identities=30% Similarity=0.402 Sum_probs=29.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHH-------hcCCChhhccceEEEEcCCCc
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISK-------QTKAPVEETRKKICLVDSKGL 377 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~-------~~Gls~eeA~~~i~lvDs~GL 377 (461)
..+|||+|||.||...|-.|...... ..|+ ++.++++.-.
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~-------~V~liE~~~~ 53 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKL-------NITLIESPDV 53 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSC-------EEEEEECSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCC-------eEEEEeCCCC
Confidence 46899999999999999998764310 0243 6889988643
No 388
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=64.74 E-value=5.2 Score=39.15 Aligned_cols=91 Identities=18% Similarity=0.124 Sum_probs=51.5
Q ss_pred HHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccc--
Q 012553 319 VAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-- 396 (461)
Q Consensus 319 l~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~-- 396 (461)
+.|+.-...--.+++|+|.|+|..|...+.+... .| | +++.+|+. +.+..+++.
T Consensus 178 ~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~-----~G-----a--~Vi~~~~~------------~~~~~~~~~lG 233 (363)
T 3uog_A 178 WFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKA-----TG-----A--EVIVTSSS------------REKLDRAFALG 233 (363)
T ss_dssp HHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHH-----TT-----C--EEEEEESC------------HHHHHHHHHHT
T ss_pred HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHH-----cC-----C--EEEEEecC------------chhHHHHHHcC
Confidence 3444323333457899999999888877665542 36 2 67877752 112222221
Q ss_pred -----cCCCCCHHHhhc----ccCCcEEEeccCCCCCCCHHHHHHHhc
Q 012553 397 -----HEPVNNLLDAVK----VIKPTILIGSSGVGRTFTKEVIEAMAS 435 (461)
Q Consensus 397 -----~~~~~~L~eaV~----~vkptvLIG~S~~~g~Ft~evv~~Ma~ 435 (461)
.....++.+.++ +.++|++|=+++ + ..-++.++.++.
T Consensus 234 a~~vi~~~~~~~~~~v~~~~~g~g~D~vid~~g-~-~~~~~~~~~l~~ 279 (363)
T 3uog_A 234 ADHGINRLEEDWVERVYALTGDRGADHILEIAG-G-AGLGQSLKAVAP 279 (363)
T ss_dssp CSEEEETTTSCHHHHHHHHHTTCCEEEEEEETT-S-SCHHHHHHHEEE
T ss_pred CCEEEcCCcccHHHHHHHHhCCCCceEEEECCC-h-HHHHHHHHHhhc
Confidence 111134555444 336899988877 3 445667777754
No 389
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=64.62 E-value=7 Score=40.09 Aligned_cols=32 Identities=22% Similarity=0.312 Sum_probs=26.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEc
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 373 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvD 373 (461)
+.+|+|+|||.||+..|..+.+. .|. ++.++|
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~----~G~-------~V~liE 38 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATL----YGK-------RVAVVD 38 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HCC-------CEEEEE
T ss_pred ccCEEEECCChhHHHHHHHHHHh----cCC-------eEEEEe
Confidence 46899999999999999988761 153 789999
No 390
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=64.58 E-value=4.5 Score=44.34 Aligned_cols=32 Identities=25% Similarity=0.491 Sum_probs=26.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.||.|+|+|..|.+||..++.+ |. +++++|..
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~a-----G~-------~V~l~D~~ 344 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILS-----NY-------PVILKEVN 344 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT-----TC-------CEEEECSS
T ss_pred cEEEEEcCCHhhHHHHHHHHhC-----CC-------EEEEEECC
Confidence 5799999999999999998753 54 57777763
No 391
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=64.43 E-value=5.8 Score=40.50 Aligned_cols=24 Identities=29% Similarity=0.486 Sum_probs=20.9
Q ss_pred ccceEEEeCcchHHHHHHHHHHHH
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALE 353 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~ 353 (461)
...+|+|+|||.||+..|..|.++
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~ 30 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQN 30 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHT
T ss_pred CCCcEEEECCCHHHHHHHHHHHhc
Confidence 457899999999999999998753
No 392
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=64.42 E-value=6.1 Score=40.38 Aligned_cols=110 Identities=13% Similarity=-0.011 Sum_probs=65.2
Q ss_pred cceEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhccceEEEEc--CC-------CccccCCcCCCChhhhhhccccCCC
Q 012553 331 EHRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVD--SK-------GLIVSSRKDSLQHFKKPWAHEHEPV 400 (461)
Q Consensus 331 d~riv~~G-AGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvD--s~-------GLi~~~R~~~L~~~k~~fA~~~~~~ 400 (461)
..||.|+| ||..|..+|-.|+.. ++--+ .+.+.|+| .. |..- | |++-.-+|.+...-.
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~-----~l~~e--~~~l~L~d~d~~~~~~~~~G~am----D-L~h~~~p~~~~v~i~ 99 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASG-----EVFGQ--DQPIALKLLGSERSFQALEGVAM----E-LEDSLYPLLREVSIG 99 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHT-----TTTCT--TCCEEEEEECCGGGHHHHHHHHH----H-HHTTTCTTEEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHcC-----CcCCC--CceeEEEecCccchhhhhHHHHH----h-HHhhhhhhcCCcEEe
Confidence 46999999 699999998877652 44111 11255543 32 2211 1 322222343321112
Q ss_pred CCHHHhhcccCCcEEEeccCCC---CC-----------CCHHHHHHHhcC-CCCcEEEEcCCCCchhhh
Q 012553 401 NNLLDAVKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASF-NEVVFQALLWLIRKFNFC 454 (461)
Q Consensus 401 ~~L~eaV~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~-~erPIIF~Lsnp~~~~~~ 454 (461)
.+..+++++ .|++|=+.+.+ |- +=+++++.++++ +..-||+-.|||-+.+--
T Consensus 100 ~~~y~~~~d--aDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPvD~~t~ 166 (375)
T 7mdh_A 100 IDPYEVFED--VDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPCNTNAL 166 (375)
T ss_dssp SCHHHHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHH
T ss_pred cCCHHHhCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCchhHHHH
Confidence 457888888 89888554433 21 223555667775 788999999999887643
No 393
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=64.38 E-value=4.9 Score=41.26 Aligned_cols=34 Identities=26% Similarity=0.425 Sum_probs=27.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
+..|+|+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~-----~G~-------~v~viEr~~ 38 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLAR-----QGV-------RVLVVERRP 38 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 5689999999999999988864 364 578888763
No 394
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=64.31 E-value=4.9 Score=39.28 Aligned_cols=35 Identities=14% Similarity=0.302 Sum_probs=26.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
..+|||+|||.||+..|..+.+ .|. .-+|.++|+.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-----~~~V~lie~~ 38 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRK-----LDG-----ETPLLMITAD 38 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHT-----TCS-----SSCEEEECSS
T ss_pred CCcEEEECChHHHHHHHHHHHh-----hCC-----CCCEEEEECC
Confidence 3579999999999999988754 353 2357777764
No 395
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=64.27 E-value=6 Score=40.15 Aligned_cols=33 Identities=15% Similarity=0.405 Sum_probs=27.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
+..|+|+|||.||+..|..+.+. |. ++.++|+.
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~-----G~-------~V~liEk~ 58 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGAL-----GK-------RVAIAEEY 58 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-----cC-------EEEEEeCC
Confidence 45899999999999999888653 53 68899984
No 396
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=64.12 E-value=4.4 Score=41.55 Aligned_cols=35 Identities=17% Similarity=0.515 Sum_probs=27.5
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
.+.+|+|+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liE~~~ 40 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAM-----RGH-------RVLLLEREA 40 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEccCC
Confidence 34689999999999999987754 354 688888764
No 397
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=63.95 E-value=5.7 Score=36.82 Aligned_cols=97 Identities=14% Similarity=0.114 Sum_probs=56.4
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcc-ccCCCCCHHHhhcc
Q 012553 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 409 (461)
Q Consensus 332 ~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~ 409 (461)
.+|+|.|| |-.|..+++.|++.- .| .+++.+|+.. .. ..+.+ +..+.. +.....++.++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~---~g-------~~V~~~~r~~----~~-~~~~~-~~~~~~~D~~d~~~~~~~~~~ 66 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLY---GT-------ENVIASDIRK----LN-TDVVN-SGPFEVVNALDFNQIEHLVEV 66 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHH---CG-------GGEEEEESCC----CS-CHHHH-SSCEEECCTTCHHHHHHHHHH
T ss_pred ceEEEECCccHHHHHHHHHHHHhC---CC-------CEEEEEcCCC----cc-ccccC-CCceEEecCCCHHHHHHHHhh
Confidence 57999998 889999998886520 12 3678777641 11 00100 111111 11222357788886
Q ss_pred cCCcEEEeccCCCCC---------------CCHHHHHHHhcCCCCcEEEE
Q 012553 410 IKPTILIGSSGVGRT---------------FTKEVIEAMASFNEVVFQAL 444 (461)
Q Consensus 410 vkptvLIG~S~~~g~---------------Ft~evv~~Ma~~~erPIIF~ 444 (461)
.++|++|=+.+.... -|..+++++.+..-+.+||.
T Consensus 67 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ 116 (312)
T 2yy7_A 67 HKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWP 116 (312)
T ss_dssp TTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECC
T ss_pred cCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 679999988775321 13456777766555567764
No 398
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=63.89 E-value=5.6 Score=40.73 Aligned_cols=34 Identities=21% Similarity=0.405 Sum_probs=27.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
.-.|+|+|||.+|+++|-.+.. .|+ ++.++|+..
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~-----~G~-------~V~llE~~~ 36 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAG-----RGL-------SVLMLEAQD 36 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEECCC
Confidence 3579999999999999998865 264 688999864
No 399
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=63.73 E-value=6.1 Score=40.21 Aligned_cols=36 Identities=14% Similarity=0.369 Sum_probs=28.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCcc
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi 378 (461)
..+|+|+|||.||+..|..|.+. |. ++.++++..-+
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~-----G~-------~V~vlE~~~~~ 39 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDS-----GL-------NVVVLEARDRV 39 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCCCC
Confidence 35799999999999999988753 53 67888876443
No 400
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=63.57 E-value=5.8 Score=45.49 Aligned_cols=38 Identities=24% Similarity=0.351 Sum_probs=33.7
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 327 ~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
++|+..+|+|+|+|..|.-||+.|+.+ |+ .+|.++|.+
T Consensus 23 ~rL~~s~VlIvG~GGlGseiak~La~a-----GV------g~itlvD~D 60 (1015)
T 3cmm_A 23 LKMQTSNVLILGLKGLGVEIAKNVVLA-----GV------KSMTVFDPE 60 (1015)
T ss_dssp HHHTTCEEEEECCSHHHHHHHHHHHHH-----CC------SEEEEECCS
T ss_pred HHHhcCEEEEECCChHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 467899999999999999999999876 74 699999986
No 401
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=63.40 E-value=6.6 Score=39.20 Aligned_cols=23 Identities=30% Similarity=0.455 Sum_probs=19.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHH
Q 012553 331 EHRFLFLGAGEAGTGIAELIALE 353 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~ 353 (461)
+.-|||+|||-||+..|..|.++
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~ 32 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQI 32 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhh
Confidence 45699999999999999988653
No 402
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=63.29 E-value=5.2 Score=36.62 Aligned_cols=94 Identities=15% Similarity=0.073 Sum_probs=54.4
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhh---hhhcc-ccCCCCCHHHhh
Q 012553 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK---KPWAH-EHEPVNNLLDAV 407 (461)
Q Consensus 333 riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k---~~fA~-~~~~~~~L~eaV 407 (461)
+|+|.|| |-.|..+++.|++. ..| -+++.++++. . ...... ..+.. +.....++.+++
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~---~~~~~~~~~~~~~~~D~~d~~~~~~~~ 63 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKT---VPA-------SQIVAIVRNP----A---KAQALAAQGITVRQADYGDEAALTSAL 63 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTT---SCG-------GGEEEEESCT----T---TCHHHHHTTCEEEECCTTCHHHHHHHT
T ss_pred CEEEEcCCchHHHHHHHHHHhh---CCC-------ceEEEEEcCh----H---hhhhhhcCCCeEEEcCCCCHHHHHHHH
Confidence 5889998 88888888877531 002 3677777641 1 121111 11111 112224577888
Q ss_pred cccCCcEEEeccCCCC----CCCHHHHHHHhcCCCCcEEEEc
Q 012553 408 KVIKPTILIGSSGVGR----TFTKEVIEAMASFNEVVFQALL 445 (461)
Q Consensus 408 ~~vkptvLIG~S~~~g----~Ft~evv~~Ma~~~erPIIF~L 445 (461)
++ +|++|=+++... ..|..++++|.+..-+.|||.=
T Consensus 64 ~~--~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~S 103 (286)
T 2zcu_A 64 QG--VEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTS 103 (286)
T ss_dssp TT--CSEEEECC--------CHHHHHHHHHHHHTCCEEEEEE
T ss_pred hC--CCEEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEEC
Confidence 86 899998776421 2467888988776556777753
No 403
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=63.26 E-value=6.9 Score=39.54 Aligned_cols=35 Identities=23% Similarity=0.418 Sum_probs=28.2
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 329 l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
-...+|+|+|||.||+..|..|.++ |. ++.++++.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~-----G~-------~V~VlE~~ 76 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRA-----GH-------DVTILEAN 76 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHT-----SC-------EEEEECSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEecc
Confidence 3467999999999999999988653 53 67788876
No 404
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=63.23 E-value=6.2 Score=37.61 Aligned_cols=38 Identities=24% Similarity=0.191 Sum_probs=27.0
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 333 riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
.|+|+|||.+|+.+|-.|.+. |.+. --..++.++|+.-
T Consensus 2 dVvIIGgGi~Gls~A~~La~~-----G~~~-~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHER-----YHSV-LQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----HTTT-SSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHh-----cccc-CCCceEEEEECCC
Confidence 689999999999999888653 3110 0014799999873
No 405
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=63.22 E-value=6.4 Score=38.64 Aligned_cols=38 Identities=18% Similarity=0.288 Sum_probs=27.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.+|+|+|||.||+..|..|.++ |... ....++.++++.
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~-----G~~~-~~~~~V~vlEa~ 43 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKE-----IKEK-NLPLELTLVEAS 43 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH-----HTTT-TCSEEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHHHh-----cccc-CCCCCEEEEECC
Confidence 5899999999999999999765 3100 011478888876
No 406
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=63.10 E-value=6.8 Score=38.66 Aligned_cols=34 Identities=21% Similarity=0.345 Sum_probs=26.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
..|+|+|||.+|+.+|-.|.+.. -| .++.++|+.
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~---pG-------~~V~vlE~~ 70 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLA---PG-------RSLLLVEEG 70 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC---TT-------SCEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHhcC---CC-------CeEEEEeCC
Confidence 57999999999999999886520 04 368899875
No 407
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=62.96 E-value=6.2 Score=40.05 Aligned_cols=33 Identities=27% Similarity=0.315 Sum_probs=26.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
+.+|||+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~-----~G~-------~V~liE~~ 38 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAAD-----EGL-------KVAIVERY 38 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 4579999999999999987754 253 68999984
No 408
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=62.95 E-value=1.8 Score=43.41 Aligned_cols=92 Identities=22% Similarity=0.247 Sum_probs=53.5
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhc---cccCCCCCHHHh
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA---HEHEPVNNLLDA 406 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA---~~~~~~~~L~ea 406 (461)
.+.||+|+|||-+|-.+|+.|.+. .++.++|+. .++ +......+. -+.....+|.++
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~-------------~~V~V~~R~----~~~---a~~la~~~~~~~~d~~~~~~l~~l 74 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE-------------FDVYIGDVN----NEN---LEKVKEFATPLKVDASNFDKLVEV 74 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-------------SEEEEEESC----HHH---HHHHTTTSEEEECCTTCHHHHHHH
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC-------------CeEEEEECC----HHH---HHHHHhhCCeEEEecCCHHHHHHH
Confidence 357999999999999999887531 367888773 111 111111111 011123468888
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEEEcCC
Q 012553 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQALLWL 447 (461)
Q Consensus 407 V~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF~Lsn 447 (461)
+++ +|++|-+.. . .+..+++++-.+. ... ++-+|.
T Consensus 75 l~~--~DvVIn~~P-~-~~~~~v~~a~l~~-G~~-~vD~s~ 109 (365)
T 2z2v_A 75 MKE--FELVIGALP-G-FLGFKSIKAAIKS-KVD-MVDVSF 109 (365)
T ss_dssp HTT--CSCEEECCC-H-HHHHHHHHHHHHT-TCC-EEECCC
T ss_pred HhC--CCEEEECCC-h-hhhHHHHHHHHHh-CCe-EEEccC
Confidence 886 899997632 3 3556666654332 223 445665
No 409
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=62.80 E-value=6.7 Score=39.50 Aligned_cols=33 Identities=24% Similarity=0.256 Sum_probs=27.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
+-.|+|+|||.||+..|..+.+. |. ++.++|+.
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~-----G~-------~V~liEk~ 35 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQL-----GL-------KTALIEKY 35 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEEECC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-----CC-------EEEEEeCC
Confidence 34699999999999999888653 53 68899986
No 410
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=62.77 E-value=4.4 Score=38.50 Aligned_cols=34 Identities=21% Similarity=0.508 Sum_probs=27.4
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
....|+|+|||.+|+.+|-.|. . |. ++.++|+..
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~-----G~-------~V~vlE~~~ 41 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-A-----HG-------RVVVLEREA 41 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-T-----TS-------CEEEECSSS
T ss_pred CcCCEEEECCcHHHHHHHHHHh-C-----CC-------CEEEEECCC
Confidence 3568999999999999998875 1 53 688999874
No 411
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=62.56 E-value=6.8 Score=39.36 Aligned_cols=32 Identities=16% Similarity=0.333 Sum_probs=25.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.+|+|+|||.||+..|..|.+. |. ++.++++.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~-----g~-------~v~v~E~~ 71 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVA-----GF-------KTLLLEAR 71 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHHC-----CC-------CEEEEeCC
Confidence 5899999999999999988653 53 56666665
No 412
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=62.11 E-value=15 Score=35.57 Aligned_cols=90 Identities=23% Similarity=0.314 Sum_probs=49.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhcccC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vk 411 (461)
+||-|+|-|..|.++|..|+++ |. +++.+|+ +.++ .++..+.-+ ....++.|+++.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~-----G~-------~V~v~dr----~~~~---~~~l~~~G~---~~~~s~~e~~~~-- 61 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA-----GY-------ELVVWNR----TASK---AEPLTKLGA---TVVENAIDAITP-- 61 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEC--------------CTTTTTTC---EECSSGGGGCCT--
T ss_pred CcEEEEecHHHHHHHHHHHHHC-----CC-------eEEEEeC----CHHH---HHHHHHcCC---eEeCCHHHHHhc--
Confidence 5899999999999999998763 64 5777775 2222 222221111 123578888876
Q ss_pred CcEEEeccCCCC----CCCHHHHHHHhcCCCCcEEEEcCCC
Q 012553 412 PTILIGSSGVGR----TFTKEVIEAMASFNEVVFQALLWLI 448 (461)
Q Consensus 412 ptvLIG~S~~~g----~Ft~evv~~Ma~~~erPIIF~Lsnp 448 (461)
.|++|=+-..+. ++..+++..+.+ .-||.=+|+.
T Consensus 62 ~dvvi~~l~~~~~~~~v~~~~~~~~~~~---~~iiid~sT~ 99 (297)
T 4gbj_A 62 GGIVFSVLADDAAVEELFSMELVEKLGK---DGVHVSMSTI 99 (297)
T ss_dssp TCEEEECCSSHHHHHHHSCHHHHHHHCT---TCEEEECSCC
T ss_pred CCceeeeccchhhHHHHHHHHHHhhcCC---CeEEEECCCC
Confidence 777774322221 233334444432 3466666654
No 413
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=62.09 E-value=4.7 Score=39.61 Aligned_cols=34 Identities=18% Similarity=0.445 Sum_probs=26.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCc
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GL 377 (461)
..++||+|||.||+..|..+.+ .| ++.++|+.-.
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~-----~g--------~V~lie~~~~ 41 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQ-----TY--------EVTVIDKEPV 41 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTT-----TS--------EEEEECSSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhh-----cC--------CEEEEECCCC
Confidence 4689999999999999988843 12 7999998754
No 414
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=62.08 E-value=6.7 Score=42.52 Aligned_cols=34 Identities=24% Similarity=0.420 Sum_probs=28.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
..+|||+|||.||+..|..+... |. ++.++|+..
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~-----G~-------~Vtlie~~~ 422 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMES-----GY-------TVHLTDTAE 422 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeCCC
Confidence 46899999999999999988652 53 699999864
No 415
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=62.03 E-value=4 Score=44.68 Aligned_cols=37 Identities=27% Similarity=0.462 Sum_probs=31.8
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 329 l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
|++.||+|+|+|..|.-+|+.|+.+ |+ .+|.++|.+=
T Consensus 409 l~~~~vlvvG~GglG~~~~~~L~~~-----Gv------g~i~l~D~d~ 445 (805)
T 2nvu_B 409 LDTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMDT 445 (805)
T ss_dssp HHTCCEEEECCSSHHHHHHHHHHTT-----TC------CEEEEEECCB
T ss_pred HhCCeEEEECCCHHHHHHHHHHHHc-----CC------CcEEEECCCe
Confidence 3788999999999999999998764 65 6999999873
No 416
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=62.00 E-value=6 Score=39.80 Aligned_cols=33 Identities=24% Similarity=0.266 Sum_probs=26.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
..|+|+|||.||+..|-.+.+ .|. ++.++|+..
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~-----~G~-------~V~llEk~~ 59 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAE-----EGA-------NVLLLDKGN 59 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 579999999999999988764 253 688999764
No 417
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=61.96 E-value=6.8 Score=38.68 Aligned_cols=35 Identities=14% Similarity=0.361 Sum_probs=27.4
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
.+.+|+|+|||.||+..|..|.+. |. ++.++++..
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~-----g~-------~v~v~E~~~ 38 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKA-----GL-------SVAVIEARD 38 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEECCC
Confidence 356899999999999999988653 53 577887763
No 418
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=61.84 E-value=19 Score=34.38 Aligned_cols=56 Identities=18% Similarity=0.197 Sum_probs=32.7
Q ss_pred CCchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcC
Q 012553 307 IQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (461)
Q Consensus 307 iQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs 374 (461)
.++.+.-.++..+.+.+..+ .-.+++++|.|||..|...+.++. + .|. +.++.+|+
T Consensus 138 ~~aa~l~~~~~~~~~~~~~~-~~~g~~VlV~GaG~vG~~aiq~ak-~----~G~------~~vi~~~~ 193 (346)
T 4a2c_A 138 EDGAFIEPITVGLHAFHLAQ-GCENKNVIIIGAGTIGLLAIQCAV-A----LGA------KSVTAIDI 193 (346)
T ss_dssp GGGGGHHHHHHHHHHHHHTT-CCTTSEEEEECCSHHHHHHHHHHH-H----TTC------SEEEEEES
T ss_pred HHHHhchHHHHHHHHHHHhc-cCCCCEEEEECCCCcchHHHHHHH-H----cCC------cEEEEEec
Confidence 34443333444444554443 346789999999988876654443 2 353 45666664
No 419
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=61.83 E-value=7.4 Score=35.86 Aligned_cols=88 Identities=17% Similarity=0.174 Sum_probs=55.0
Q ss_pred CcccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHh
Q 012553 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (461)
Q Consensus 328 ~l~d~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~ea 406 (461)
+-...+|+|.|| |-.|..+++.|++ .| -+++.+|++ ..| +. ...++.++
T Consensus 9 ~~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~D-l~-----------d~~~~~~~ 58 (292)
T 1vl0_A 9 HHHHMKILITGANGQLGREIQKQLKG-----KN-------VEVIPTDVQ------DLD-IT-----------NVLAVNKF 58 (292)
T ss_dssp ---CEEEEEESTTSHHHHHHHHHHTT-----SS-------EEEEEECTT------TCC-TT-----------CHHHHHHH
T ss_pred ccccceEEEECCCChHHHHHHHHHHh-----CC-------CeEEeccCc------cCC-CC-----------CHHHHHHH
Confidence 345678999987 8888888887754 24 368888774 112 21 11346777
Q ss_pred hcccCCcEEEeccCCCCC----------------CCHHHHHHHhcCCCCcEEEEcC
Q 012553 407 VKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEVVFQALLW 446 (461)
Q Consensus 407 V~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIF~Ls 446 (461)
++.+++|++|=+.+.... -|..+++++.+..- .|||.=|
T Consensus 59 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS 113 (292)
T 1vl0_A 59 FNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQIST 113 (292)
T ss_dssp HHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred HHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEech
Confidence 776679999988775421 03566777766444 6777544
No 420
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=61.82 E-value=5.6 Score=39.84 Aligned_cols=34 Identities=24% Similarity=0.267 Sum_probs=27.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
+..|+|+|||+||+..|..+.+ .|. ++.++|+..
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~-----~G~-------~V~vlEk~~ 37 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAK-----LGK-------SVTVFDNGK 37 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 4579999999999999988765 253 688888764
No 421
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=61.81 E-value=8.8 Score=34.10 Aligned_cols=99 Identities=12% Similarity=0.030 Sum_probs=56.4
Q ss_pred ccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhc-cccCCCCCHHHhh
Q 012553 330 AEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-HEHEPVNNLLDAV 407 (461)
Q Consensus 330 ~d~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA-~~~~~~~~L~eaV 407 (461)
...+|+|.|| |-.|..+++.+++. | ..-++++++++. ++.+.+.. ...+. -+.....++.+++
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~-----~-----~g~~V~~~~r~~----~~~~~~~~-~~~~~~~D~~d~~~~~~~~ 67 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEG-----S-----DKFVAKGLVRSA----QGKEKIGG-EADVFIGDITDADSINPAF 67 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHT-----T-----TTCEEEEEESCH----HHHHHTTC-CTTEEECCTTSHHHHHHHH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhc-----C-----CCcEEEEEEcCC----CchhhcCC-CeeEEEecCCCHHHHHHHH
Confidence 4578999996 88888888887652 2 023688887742 00000100 00111 1111224577788
Q ss_pred cccCCcEEEeccCCCCC----------------C-------------CHHHHHHHhcCCCCcEEEEc
Q 012553 408 KVIKPTILIGSSGVGRT----------------F-------------TKEVIEAMASFNEVVFQALL 445 (461)
Q Consensus 408 ~~vkptvLIG~S~~~g~----------------F-------------t~evv~~Ma~~~erPIIF~L 445 (461)
+. +|++|=+.+.... | +..++++|.+..-+.|||.=
T Consensus 68 ~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~S 132 (253)
T 1xq6_A 68 QG--IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVG 132 (253)
T ss_dssp TT--CSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEE
T ss_pred cC--CCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEc
Confidence 75 8999977654310 1 46778888766556688753
No 422
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=61.45 E-value=11 Score=33.74 Aligned_cols=68 Identities=15% Similarity=0.205 Sum_probs=39.9
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhccc-
Q 012553 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI- 410 (461)
Q Consensus 333 riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~v- 410 (461)
+++|.|| |-.|..+++.|++ .| -+++++|++. + .+.. .+.-+.....++.++++.+
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~---~~~~---~~~~D~~~~~~~~~~~~~~~ 60 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLAR-----AG-------HTVIGIDRGQ----A---DIEA---DLSTPGGRETAVAAVLDRCG 60 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSS----S---SEEC---CTTSHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCcHHHHHHHHHHHh-----CC-------CEEEEEeCCh----h---Hccc---cccCCcccHHHHHHHHHHcC
Confidence 6899987 6677777777754 25 2688888742 1 1111 1111111113466666644
Q ss_pred -CCcEEEeccCCC
Q 012553 411 -KPTILIGSSGVG 422 (461)
Q Consensus 411 -kptvLIG~S~~~ 422 (461)
++|++|=+.+..
T Consensus 61 ~~~d~vi~~Ag~~ 73 (255)
T 2dkn_A 61 GVLDGLVCCAGVG 73 (255)
T ss_dssp TCCSEEEECCCCC
T ss_pred CCccEEEECCCCC
Confidence 799999887754
No 423
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=61.44 E-value=18 Score=34.55 Aligned_cols=47 Identities=21% Similarity=0.191 Sum_probs=31.6
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcC
Q 012553 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (461)
Q Consensus 316 Agll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs 374 (461)
...+.+++..+.+ ..++++|+|||+.|...+.++..+ .| .+++.+|+
T Consensus 150 ~ta~~~l~~~~~~-~g~~VlV~GaG~~g~~a~~~a~~~----~g-------~~Vi~~~~ 196 (348)
T 4eez_A 150 VTTYKAIKVSGVK-PGDWQVIFGAGGLGNLAIQYAKNV----FG-------AKVIAVDI 196 (348)
T ss_dssp HHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHHT----SC-------CEEEEEES
T ss_pred eeEEeeecccCCC-CCCEEEEEcCCCccHHHHHHHHHh----CC-------CEEEEEEC
Confidence 3445677766543 578999999999887666555432 12 46887776
No 424
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=61.43 E-value=11 Score=37.65 Aligned_cols=36 Identities=19% Similarity=0.298 Sum_probs=28.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
..+|+|+|||.+|+.+|..|.+. |- ..++.++++..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~-----g~-----~~~v~v~E~~~ 39 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERA-----FP-----DLNITLLEAGE 39 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHH-----CT-----TSEEEEECSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHh-----CC-----CCCEEEEECCC
Confidence 46899999999999999988764 41 14788888854
No 425
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=61.40 E-value=20 Score=34.49 Aligned_cols=77 Identities=16% Similarity=0.260 Sum_probs=46.8
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhcccC
Q 012553 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (461)
Q Consensus 333 riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vk 411 (461)
||+|.|| |-.|..+++.|++. |. -+++.+|+. ....+|.+++++
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~-----g~------~~v~~~d~~----------------------~d~~~l~~~~~~-- 46 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTST-----TD------HHIFEVHRQ----------------------TKEEELESALLK-- 46 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH-----CC------CEEEECCTT----------------------CCHHHHHHHHHH--
T ss_pred EEEEECCCCHHHHHHHHHHHhC-----CC------CEEEEECCC----------------------CCHHHHHHHhcc--
Confidence 7999995 89999999888763 42 257766664 011235566665
Q ss_pred CcEEEeccCCCC------------CCCHHHHHHHhcCCCC-cEEEE
Q 012553 412 PTILIGSSGVGR------------TFTKEVIEAMASFNEV-VFQAL 444 (461)
Q Consensus 412 ptvLIG~S~~~g------------~Ft~evv~~Ma~~~er-PIIF~ 444 (461)
+|++|=+.+... ..+..+++++.+..-+ .+||.
T Consensus 47 ~d~Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~ 92 (369)
T 3st7_A 47 ADFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLS 92 (369)
T ss_dssp CSEEEECCCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEE
T ss_pred CCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEe
Confidence 777775554321 1235577777655444 56654
No 426
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=61.40 E-value=3.6 Score=41.28 Aligned_cols=34 Identities=38% Similarity=0.446 Sum_probs=25.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
+.+|+|+|||.||+..|..+.+ .|+ ++.++|+.-
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~-----~G~-------~V~vlE~~~ 39 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSR-----RGL-------KILLVDSKP 39 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSS-----SSC-------CEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 3579999999999999988754 354 567777653
No 427
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=61.39 E-value=7.3 Score=39.02 Aligned_cols=34 Identities=12% Similarity=0.200 Sum_probs=27.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 333 riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
+|||+|||.||+..|..+.+.. .| .++.++|+..
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~---~g-------~~V~lie~~~ 35 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADH---PD-------ADVTAYEMND 35 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCC
Confidence 6999999999999999987531 13 4788998865
No 428
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=61.29 E-value=8.7 Score=39.23 Aligned_cols=35 Identities=17% Similarity=0.309 Sum_probs=28.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
..+|+|+|||.||+..|..+... |- ..++.++|+.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-----~~~V~vie~~ 40 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKH-----HS-----RAHVDIYEKQ 40 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CS-----SCEEEEECSS
T ss_pred CceEEEECcCHHHHHHHHHHHhc-----CC-----CCCEEEEeCC
Confidence 35899999999999999998753 41 2478999876
No 429
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=61.25 E-value=6.2 Score=41.05 Aligned_cols=33 Identities=27% Similarity=0.389 Sum_probs=26.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
+..|+|+|||.||+..|-.|.. .|+ ++.++|+.
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~-----~G~-------~V~vlEr~ 58 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAH-----RQV-------GHLVVEQT 58 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCC
Confidence 4689999999999999988865 364 57777765
No 430
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=61.19 E-value=7.4 Score=38.91 Aligned_cols=34 Identities=15% Similarity=0.211 Sum_probs=27.0
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 333 riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
+|||+|||.||+..|..+.+. + ...++.++|+..
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~-----~-----~g~~V~lie~~~ 35 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNL-----H-----PDAEIQWYEKGD 35 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHH-----C-----TTSEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHHh-----C-----cCCeEEEEECCC
Confidence 699999999999999988753 1 124789998865
No 431
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=61.07 E-value=3.8 Score=40.33 Aligned_cols=96 Identities=15% Similarity=0.090 Sum_probs=52.8
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhc
Q 012553 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVK 408 (461)
Q Consensus 329 l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~ 408 (461)
....||.|+|+|..|...++.+.. +..| .+-+.++|++ . +......+.|-.......++.|+++
T Consensus 21 m~~~rvgiIG~G~~g~~~~~~l~~---~~~~------~~lvav~d~~----~---~~~~~~a~~~g~~~~~~~~~~~ll~ 84 (357)
T 3ec7_A 21 GMTLKAGIVGIGMIGSDHLRRLAN---TVSG------VEVVAVCDIV----A---GRAQAALDKYAIEAKDYNDYHDLIN 84 (357)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH---TCTT------EEEEEEECSS----T---THHHHHHHHHTCCCEEESSHHHHHH
T ss_pred CCeeeEEEECCcHHHHHHHHHHHh---hCCC------cEEEEEEeCC----H---HHHHHHHHHhCCCCeeeCCHHHHhc
Confidence 345699999999988776665542 1112 1224467752 1 1122222333211122478999999
Q ss_pred ccCCcEEEeccCCCCCCCHHHHHHHhcCCCCcEEE
Q 012553 409 VIKPTILIGSSGVGRTFTKEVIEAMASFNEVVFQA 443 (461)
Q Consensus 409 ~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 443 (461)
.-++|+++ ++++. .+-.++++...+.. ++|+.
T Consensus 85 ~~~~D~V~-i~tp~-~~h~~~~~~al~aG-k~Vl~ 116 (357)
T 3ec7_A 85 DKDVEVVI-ITASN-EAHADVAVAALNAN-KYVFC 116 (357)
T ss_dssp CTTCCEEE-ECSCG-GGHHHHHHHHHHTT-CEEEE
T ss_pred CCCCCEEE-EcCCc-HHHHHHHHHHHHCC-CCEEe
Confidence 87789988 55545 45555555544322 55554
No 432
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=61.01 E-value=3.1 Score=38.79 Aligned_cols=100 Identities=11% Similarity=0.037 Sum_probs=58.4
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCc--CCCChhhhhhcc-ccCCCCCHHHh
Q 012553 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRK--DSLQHFKKPWAH-EHEPVNNLLDA 406 (461)
Q Consensus 331 d~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~--~~L~~~k~~fA~-~~~~~~~L~ea 406 (461)
..+|+|.|| |-.|..+++.|++. | ..+++.++++. .+. ..+......+.. +-....+|.++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~-----g------~~~V~~~~R~~----~~~~~~~l~~~~~~~~~~D~~d~~~l~~~ 69 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLED-----G------TFKVRVVTRNP----RKKAAKELRLQGAEVVQGDQDDQVIMELA 69 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH-----C------SSEEEEEESCT----TSHHHHHHHHTTCEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhc-----C------CceEEEEEcCC----CCHHHHHHHHCCCEEEEecCCCHHHHHHH
Confidence 468999998 99999999888753 4 13677777641 110 000000111111 11222468888
Q ss_pred hcccCCcEEEeccCCCCC--------CCHHHHHHHhcCCCCcEEEEcCCC
Q 012553 407 VKVIKPTILIGSSGVGRT--------FTKEVIEAMASFNEVVFQALLWLI 448 (461)
Q Consensus 407 V~~vkptvLIG~S~~~g~--------Ft~evv~~Ma~~~erPIIF~Lsnp 448 (461)
+++ +|++|-+++.... .+..++++|.+..-+-||| .|-.
T Consensus 70 ~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~-~S~~ 116 (299)
T 2wm3_A 70 LNG--AYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVY-SGLE 116 (299)
T ss_dssp HTT--CSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEE-CCCC
T ss_pred Hhc--CCEEEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEE-EcCc
Confidence 887 8999987653211 3556778887655567887 5543
No 433
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=60.96 E-value=6.1 Score=39.88 Aligned_cols=35 Identities=29% Similarity=0.386 Sum_probs=27.8
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
.+.+|+|+|||.||+..|..+.+. |. ++.++|+.-
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~-----G~-------~V~liE~~~ 53 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAEL-----GA-------RAAVVESHK 53 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEecCC
Confidence 356899999999999999888653 53 688999653
No 434
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=60.79 E-value=4.8 Score=37.05 Aligned_cols=84 Identities=21% Similarity=0.300 Sum_probs=54.3
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhccc
Q 012553 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (461)
Q Consensus 332 ~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~v 410 (461)
.||+|.|| |-.|..+++.|+.. | -+++.+++. ..| +. ...++.++++..
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~------~~D-~~-----------d~~~~~~~~~~~ 55 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPE-----E-------YDIYPFDKK------LLD-IT-----------NISQVQQVVQEI 55 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTT-----T-------EEEEEECTT------TSC-TT-----------CHHHHHHHHHHH
T ss_pred eEEEEECCCCHHHHHHHHHHHhC-----C-------CEEEEeccc------ccC-CC-----------CHHHHHHHHHhc
Confidence 38999997 88898888877542 4 378888871 112 21 113477788877
Q ss_pred CCcEEEeccCCCCC----------------CCHHHHHHHhcCCCCcEEEEcC
Q 012553 411 KPTILIGSSGVGRT----------------FTKEVIEAMASFNEVVFQALLW 446 (461)
Q Consensus 411 kptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIF~Ls 446 (461)
++|++|=+++.... -|..+++++.+..- .+||.=|
T Consensus 56 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS 106 (287)
T 3sc6_A 56 RPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYIST 106 (287)
T ss_dssp CCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred CCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEch
Confidence 79999987765431 03457777766554 4777533
No 435
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=60.67 E-value=19 Score=32.98 Aligned_cols=36 Identities=25% Similarity=0.397 Sum_probs=24.0
Q ss_pred CcccceEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 328 TLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 328 ~l~d~riv~~GAG-sAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
++++.+++|.||+ -.|.++|+.+++ .|. +++++|++
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~-----~G~-------~V~~~~r~ 40 (257)
T 3tpc_A 4 QLKSRVFIVTGASSGLGAAVTRMLAQ-----EGA-------TVLGLDLK 40 (257)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 5778899999984 345556655543 253 68888864
No 436
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=60.62 E-value=7.5 Score=39.64 Aligned_cols=35 Identities=29% Similarity=0.421 Sum_probs=27.7
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcC
Q 012553 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (461)
Q Consensus 328 ~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs 374 (461)
.++.+||+|+|.|.+|+++|+++... |. ++...|.
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~-----G~-------~V~~~D~ 40 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKL-----GA-------IVTVNDG 40 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHT-----TC-------EEEEEES
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhC-----CC-------EEEEEeC
Confidence 46789999999999999999888652 53 5666666
No 437
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=60.53 E-value=9.6 Score=37.05 Aligned_cols=58 Identities=21% Similarity=0.139 Sum_probs=36.3
Q ss_pred cCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcC
Q 012553 305 DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (461)
Q Consensus 305 DDiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs 374 (461)
++.++.....++..+.|++..+.+ .+++|+|+|||+.|...+.+... .|. ++++.+|+
T Consensus 155 s~~~aa~~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 212 (363)
T 3m6i_A 155 SYENGAMLEPLSVALAGLQRAGVR-LGDPVLICGAGPIGLITMLCAKA-----AGA------CPLVITDI 212 (363)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTCC-TTCCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEEES
T ss_pred CHHHHHhhhHHHHHHHHHHHcCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 334444444455556667555433 46789999999888877655432 363 46887775
No 438
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=60.31 E-value=9 Score=39.13 Aligned_cols=32 Identities=22% Similarity=0.340 Sum_probs=26.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEc
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 373 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvD 373 (461)
+.+|+|+|||+||+..|..+.+. .|. ++.++|
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~----~G~-------~V~liE 34 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASL----HKK-------RVAVID 34 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHH----HCC-------CEEEEE
T ss_pred cccEEEECCCHHHHHHHHHHHHH----cCC-------EEEEEe
Confidence 45799999999999999988761 153 699999
No 439
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=60.23 E-value=21 Score=35.30 Aligned_cols=78 Identities=17% Similarity=0.213 Sum_probs=52.7
Q ss_pred HHHHHHHHhcCCCeeeeeecCCcc-------cHHHHHHHHcCCCceeccCCCchhHHHHHHHHHHHHHhCCCcccceEEE
Q 012553 264 EFMSAVKQNYGEKVLIQFEDFANH-------NAFELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLF 336 (461)
Q Consensus 264 efv~av~~~fGp~~lIq~EDf~~~-------~af~iL~ryr~~~~~FnDDiQGTaaV~LAgll~Alk~~g~~l~d~riv~ 336 (461)
+.+++.-+.|.+..+|| |++.. .-+++..+|.-.+++.|-|-+|++.- .++
T Consensus 95 ~V~eaaL~~~~Ga~iIN--dIs~~~~d~~~~~~~~l~a~~ga~vV~mh~d~~G~p~t---------------~~~----- 152 (300)
T 3k13_A 95 EVIEAGLKCLQGKSIVN--SISLKEGEEVFLEHARIIKQYGAATVVMAFDEKGQADT---------------AAR----- 152 (300)
T ss_dssp HHHHHHHHHCSSCCEEE--EECSTTCHHHHHHHHHHHHHHTCEEEEESEETTEECCS---------------HHH-----
T ss_pred HHHHHHHHhcCCCCEEE--eCCcccCChhHHHHHHHHHHhCCeEEEEeeCCCCCCCC---------------HHH-----
Confidence 46666666654556776 66654 57789999999999999888887631 011
Q ss_pred eCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcC
Q 012553 337 LGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (461)
Q Consensus 337 ~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs 374 (461)
-+.+++.+...++.+.|++ +++|| +|.
T Consensus 153 ------~~~i~~r~~~~~~~~~Gi~----~~~Ii-lDP 179 (300)
T 3k13_A 153 ------KIEVCERAYRLLVDKVGFN----PHDII-FDP 179 (300)
T ss_dssp ------HHHHHHHHHHHHHHHTCCC----GGGEE-EEC
T ss_pred ------HHHHHHHHHHHHHHHcCCC----HHHEE-EeC
Confidence 1257888777754457985 56776 676
No 440
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=60.22 E-value=6.4 Score=39.41 Aligned_cols=22 Identities=23% Similarity=0.286 Sum_probs=18.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHH
Q 012553 332 HRFLFLGAGEAGTGIAELIALE 353 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~ 353 (461)
.+|||+|||-+|+..|-.|.++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~ 23 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAA 23 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT
T ss_pred CCEEEECCcHHHHHHHHHHHHC
Confidence 4799999999999999887653
No 441
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=60.05 E-value=7.5 Score=39.61 Aligned_cols=36 Identities=28% Similarity=0.477 Sum_probs=27.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
.+|||+|||.||+..|..+.+.- ..| .++.++|+..
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~--~~G-------~~V~liE~~~ 38 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSH--PET-------TQVTVIDCDG 38 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC--TTT-------EEEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--CCc-------CEEEEEeCCC
Confidence 47999999999999999886530 003 3799999874
No 442
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=60.00 E-value=5.6 Score=37.74 Aligned_cols=99 Identities=12% Similarity=0.164 Sum_probs=59.5
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhh----------hhcc-c
Q 012553 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK----------PWAH-E 396 (461)
Q Consensus 329 l~d~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~----------~fA~-~ 396 (461)
+...+|+|.|| |-.|..+++.|++. | .+++.+|+..- .....+...+. .+.. +
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~D 87 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKL-----N-------QVVIGLDNFST---GHQYNLDEVKTLVSTEQWSRFCFIEGD 87 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEECCSS---CCHHHHHHHHHTSCHHHHTTEEEEECC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHC-----C-------CEEEEEeCCCC---CchhhhhhhhhccccccCCceEEEEcc
Confidence 45689999996 88999998888652 5 36888877421 00000111110 1111 1
Q ss_pred cCCCCCHHHhhcccCCcEEEeccCCCCC----------------CCHHHHHHHhcCCCCcEEEE
Q 012553 397 HEPVNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEVVFQAL 444 (461)
Q Consensus 397 ~~~~~~L~eaV~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIF~ 444 (461)
.....++.++++ ++|++|=+++.... -|..+++++.+..-+.+||.
T Consensus 88 l~d~~~~~~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~ 149 (351)
T 3ruf_A 88 IRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYA 149 (351)
T ss_dssp TTCHHHHHHHTT--TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCHHHHHHHhc--CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 112235778887 49999988875321 13347888887766678886
No 443
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=59.95 E-value=10 Score=38.08 Aligned_cols=33 Identities=21% Similarity=0.388 Sum_probs=26.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
..+|+|+|||.+|+..|..+.+. |. ++.++++.
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~-----g~-------~v~vlE~~ 65 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGA-----GH-------QVTVLEAS 65 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHH-----TC-------EEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 46899999999999999988753 53 57777765
No 444
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=59.85 E-value=62 Score=32.09 Aligned_cols=135 Identities=13% Similarity=0.155 Sum_probs=80.6
Q ss_pred HHHHHHHHHHhcCCCeeeeeecCCcccHHHHHHHHcCCCceec--cCCCchhHHHHHHHHHHHHHhCCCcc-cceEEEeC
Q 012553 262 LDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGTLA-EHRFLFLG 338 (461)
Q Consensus 262 idefv~av~~~fGp~~lIq~EDf~~~~af~iL~ryr~~~~~Fn--DDiQGTaaV~LAgll~Alk~~g~~l~-d~riv~~G 338 (461)
+.+.++.+ .+| .++ |-+--++ +.+.+.+.+|- ++||.| || +-=-.=+||=++.-.+.. ++++ +.||+++|
T Consensus 81 l~DTarvl-s~~-~D~-iviR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~Ti~e~~-g~l~~gl~va~vG 153 (307)
T 3tpf_A 81 VKDTARVI-GAM-VDF-VMMRVNK-HETLLEFARYS-KAPVINALSE-LYHPTQVLGDLFTIKEWN-KMQNGIAKVAFIG 153 (307)
T ss_dssp HHHHHHHH-HHH-SSE-EEEECSC-HHHHHHHHHHC-SSCEEEEECS-SCCHHHHHHHHHHHHHTT-CCGGGCCEEEEES
T ss_pred HHHHHHHH-HHh-CCE-EEEecCC-hHHHHHHHHhC-CCCEEeCCCC-CcCcHHHHHHHHHHHHHh-CCCCCCCEEEEEc
Confidence 33444433 345 443 3355554 35555666664 689998 44 332334566666544444 4799 99999999
Q ss_pred cchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcccc----CCCCCHHHhhcccCCcE
Q 012553 339 AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLLDAVKVIKPTI 414 (461)
Q Consensus 339 AGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~----~~~~~L~eaV~~vkptv 414 (461)
-+. -+|+-++.++.+ .|+ ++.++-.+|+.... + +-...+.+|+.. ....++.|||++ +||
T Consensus 154 D~~---~va~Sl~~~~~~-~G~-------~v~~~~P~~~~~~~--~-~~~~~~~~a~~~g~~~~~~~d~~eav~~--aDv 217 (307)
T 3tpf_A 154 DSN---NMCNSWLITAAI-LGF-------EISIAMPKNYKISP--E-IWEFAMKQALISGAKISLGYDKFEALKD--KDV 217 (307)
T ss_dssp CSS---HHHHHHHHHHHH-HTC-------EEEEECCTTCCCCH--H-HHHHHHHHHHHHTCEEEEESCHHHHHTT--CSE
T ss_pred CCC---ccHHHHHHHHHH-cCC-------EEEEECCCccCCCH--H-HHHHHHHHHHHcCCeEEEEcCHHHHhcC--CCE
Confidence 963 477877777765 364 68888888774321 1 111112233221 123689999998 999
Q ss_pred EEecc
Q 012553 415 LIGSS 419 (461)
Q Consensus 415 LIG~S 419 (461)
+.-..
T Consensus 218 vyt~~ 222 (307)
T 3tpf_A 218 VITDT 222 (307)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 97654
No 445
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=59.67 E-value=7.6 Score=36.57 Aligned_cols=36 Identities=25% Similarity=0.399 Sum_probs=27.1
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
.+..|+|+|||.||+..|..+.+. .| .++.++|+..
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~----~G-------~~V~viEk~~ 73 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKN----PN-------VQVAIIEQSV 73 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTS----TT-------SCEEEEESSS
T ss_pred cccCEEEECccHHHHHHHHHHHHc----CC-------CeEEEEECCC
Confidence 356899999999999999887531 14 3688888764
No 446
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=59.57 E-value=16 Score=34.00 Aligned_cols=91 Identities=13% Similarity=0.145 Sum_probs=48.9
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhcc
Q 012553 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (461)
Q Consensus 331 d~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~ 409 (461)
+.+|+|.|| |-.|..+++.|+. .| -+++.+|+. +.. + . .+.-+.....++.++++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~~---~-~-~~~~Dl~d~~~~~~~~~~ 58 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQ-----NN-------WHAVGCGFR------RAR---P-K-FEQVNLLDSNAVHHIIHD 58 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEEC-----------------------------CHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHh-----CC-------CeEEEEccC------CCC---C-C-eEEecCCCHHHHHHHHHh
Confidence 358999998 8889888888764 24 367877753 111 0 1 111122223467788887
Q ss_pred cCCcEEEeccCCCCC----------------CCHHHHHHHhcCCCCcEEEEc
Q 012553 410 IKPTILIGSSGVGRT----------------FTKEVIEAMASFNEVVFQALL 445 (461)
Q Consensus 410 vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIF~L 445 (461)
.++|++|=+.+.... -|..+++++.+..- .|||.=
T Consensus 59 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~S 109 (315)
T 2ydy_A 59 FQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYIS 109 (315)
T ss_dssp HCCSEEEECC-------------------CHHHHHHHHHHHHHTC-EEEEEE
T ss_pred hCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEc
Confidence 789999987764321 13456677665443 677643
No 447
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=59.44 E-value=8.5 Score=37.60 Aligned_cols=35 Identities=17% Similarity=0.347 Sum_probs=26.5
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
+..+|+|+|||.||+..|..|.+. |. .++.++++.
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~-----g~------~~v~v~E~~ 39 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQA-----GF------HDYTILERT 39 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT-----TC------CCEEEECSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC-----CC------CcEEEEECC
Confidence 456899999999999999988653 41 356677664
No 448
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=59.31 E-value=7.3 Score=38.63 Aligned_cols=35 Identities=26% Similarity=0.444 Sum_probs=26.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
.+|+|+|||.||+..|-.|.+. |.+ .++.++++..
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~-----G~~-----~~V~vlEa~~ 37 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRA-----PCP-----PKVVLVESSE 37 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTS-----SSC-----CEEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhC-----CCC-----CcEEEEeCCC
Confidence 5799999999999999988652 531 2788888753
No 449
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=59.22 E-value=1.6 Score=41.41 Aligned_cols=21 Identities=19% Similarity=0.164 Sum_probs=16.9
Q ss_pred ceEEEeCcchHHHHHHHHHHH
Q 012553 332 HRFLFLGAGEAGTGIAELIAL 352 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~ 352 (461)
.||.|+|+|..|.++|..+..
T Consensus 3 m~I~iIG~G~mG~~la~~l~~ 23 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKD 23 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-
T ss_pred ceEEEEeCCHHHHHHHHHHHH
Confidence 379999999999999887654
No 450
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=59.16 E-value=30 Score=31.92 Aligned_cols=95 Identities=12% Similarity=0.079 Sum_probs=53.3
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcc-ccCCCCCHHHhhcc
Q 012553 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 409 (461)
Q Consensus 332 ~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~ 409 (461)
.||+|.|| |-.|..+++.|++. | -+++.+|+..- ....... ....+.. +..... +.++++.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~~---~~~~~~~-~~~~~~~~Dl~d~~-~~~~~~~ 63 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVEL-----G-------YEVVVVDNLSS---GRREFVN-PSAELHVRDLKDYS-WGAGIKG 63 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEECCCSS---CCGGGSC-TTSEEECCCTTSTT-TTTTCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhC-----C-------CEEEEEeCCCC---CchhhcC-CCceEEECccccHH-HHhhcCC
Confidence 37999998 88999998888652 5 26888876421 1111011 1111111 111122 5556654
Q ss_pred cCCcEEEeccCCCCC-C---------------CHHHHHHHhcCCCCcEEEEcC
Q 012553 410 IKPTILIGSSGVGRT-F---------------TKEVIEAMASFNEVVFQALLW 446 (461)
Q Consensus 410 vkptvLIG~S~~~g~-F---------------t~evv~~Ma~~~erPIIF~Ls 446 (461)
|++|=+.+.... . |..+++++.+..-+.|||.=|
T Consensus 64 ---d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 113 (312)
T 3ko8_A 64 ---DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASS 113 (312)
T ss_dssp ---SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred ---CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCc
Confidence 999987764321 1 235677776666667888544
No 451
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=59.03 E-value=16 Score=34.92 Aligned_cols=50 Identities=12% Similarity=-0.067 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 314 VLAGVVAALKLIGGTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 314 ~LAgll~Alk~~g~~l~d~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.++..+.|++....--.+++++|.|| |..|..+++++.. .| + +++.+|+.
T Consensus 129 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~-----~G-----~--~Vi~~~~~ 179 (333)
T 1wly_A 129 KGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARH-----LG-----A--TVIGTVST 179 (333)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHH-----TT-----C--EEEEEESS
T ss_pred hHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHH-----CC-----C--EEEEEeCC
Confidence 34444555553344446789999996 9999988887654 25 2 68888764
No 452
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=58.92 E-value=41 Score=32.87 Aligned_cols=82 Identities=17% Similarity=0.312 Sum_probs=46.8
Q ss_pred ccceEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccc------cCCCCC
Q 012553 330 AEHRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE------HEPVNN 402 (461)
Q Consensus 330 ~d~riv~~G-AGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~------~~~~~~ 402 (461)
..++|+|.| +|+.|...+.+... + .| .+++.+|+. +.+..+++. -....+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~-~---~g-------~~Vi~~~~~------------~~~~~~~~~lGad~vi~~~~~ 227 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQ-R---TD-------LTVIATASR------------PETQEWVKSLGAHHVIDHSKP 227 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHH-H---CC-------SEEEEECSS------------HHHHHHHHHTTCSEEECTTSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-h---cC-------CEEEEEeCC------------HHHHHHHHHcCCCEEEeCCCC
Confidence 578999999 89888877665532 1 13 368888763 122233321 011134
Q ss_pred HHHhhccc---CCcEEEeccCCCCCCCHHHHHHHhc
Q 012553 403 LLDAVKVI---KPTILIGSSGVGRTFTKEVIEAMAS 435 (461)
Q Consensus 403 L~eaV~~v---kptvLIG~S~~~g~Ft~evv~~Ma~ 435 (461)
+.+.++.. ++|++|-+++.+ ..-++.++.++.
T Consensus 228 ~~~~v~~~~~~g~Dvvid~~g~~-~~~~~~~~~l~~ 262 (363)
T 4dvj_A 228 LAAEVAALGLGAPAFVFSTTHTD-KHAAEIADLIAP 262 (363)
T ss_dssp HHHHHHTTCSCCEEEEEECSCHH-HHHHHHHHHSCT
T ss_pred HHHHHHHhcCCCceEEEECCCch-hhHHHHHHHhcC
Confidence 66655543 578888776633 223455666654
No 453
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=58.82 E-value=1e+02 Score=30.58 Aligned_cols=129 Identities=13% Similarity=0.157 Sum_probs=80.1
Q ss_pred HHhcCCCeeeeeecCCcccHHHHHHHHcCCCceec--c--CCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHH
Q 012553 270 KQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--D--DIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTG 345 (461)
Q Consensus 270 ~~~fGp~~lIq~EDf~~~~af~iL~ryr~~~~~Fn--D--DiQGTaaV~LAgll~Alk~~g~~l~d~riv~~GAGsAgiG 345 (461)
-.+| .++ |-+--++ +.+.+.+.+|-.++||.| | ..|=|= +||=++--.+.. ++|++.||+++|-|.= --
T Consensus 95 ls~~-~D~-iviR~~~-~~~~~~la~~~~~vPVINag~G~~~HPtQ--aLaDl~Ti~e~~-g~l~gl~va~vGD~~~-~r 167 (310)
T 3csu_A 95 ISTY-VDA-IVMRHPQ-EGAARLATEFSGNVPVLNAGDGSNQHPTQ--TLLDLFTIQETQ-GRLDNLHVAMVGDLKY-GR 167 (310)
T ss_dssp HTTT-CSE-EEEEESS-TTHHHHHHHHCTTCCEEEEEETTSCCHHH--HHHHHHHHHHHH-SCSSSCEEEEESCTTT-CH
T ss_pred HHHh-CCE-EEEECCC-hhHHHHHHHhcCCCCEEcCccCCCCCchH--HHHHHHHHHHHh-CCcCCcEEEEECCCCC-Cc
Confidence 3456 444 4455554 455667778865799999 3 456554 456666555544 4799999999998631 12
Q ss_pred HHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcccc----CCCCCHHHhhcccCCcEEEeccCC
Q 012553 346 IAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLLDAVKVIKPTILIGSSGV 421 (461)
Q Consensus 346 iA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~----~~~~~L~eaV~~vkptvLIG~S~~ 421 (461)
+|+-++.++.+-.|+ ++.++-.+|+--. +.-..+++.. ....++.|||++ +||+.-..-+
T Consensus 168 va~Sl~~~~~~~~g~-------~v~~~~P~~~~~~-------~~~~~~~~~~g~~~~~~~d~~eav~~--aDvvyt~~~q 231 (310)
T 3csu_A 168 TVHSLTQALAKFDGN-------RFYFIAPDALAMP-------QYILDMLDEKGIAWSLHSSIEEVMAE--VDILYMTRVQ 231 (310)
T ss_dssp HHHHHHHHHHTSSSC-------EEEEECCGGGCCC-------HHHHHHHHHTTCCEEECSCGGGTTTT--CSEEEECC--
T ss_pred hHHHHHHHHHhCCCC-------EEEEECCcccccC-------HHHHHHHHHcCCeEEEEcCHHHHhcC--CCEEEECCcc
Confidence 566666666552164 7888888887332 2222233321 113689999998 9999976543
No 454
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=58.70 E-value=8.7 Score=36.58 Aligned_cols=100 Identities=12% Similarity=0.170 Sum_probs=57.7
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhh----------hhcc-c
Q 012553 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK----------PWAH-E 396 (461)
Q Consensus 329 l~d~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~----------~fA~-~ 396 (461)
++..+|+|.|| |-.|..+++.|+.. | .+++.+|+.-- ...+.+...++ .+.. +
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~D 89 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKL-----D-------QKVVGLDNFAT---GHQRNLDEVRSLVSEKQWSNFKFIQGD 89 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEECCSS---CCHHHHHHHHHHSCHHHHTTEEEEECC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHC-----C-------CEEEEEeCCCc---cchhhHHHHhhhcccccCCceEEEECC
Confidence 45678999998 88888888887652 4 36888887421 00011111111 1111 1
Q ss_pred cCCCCCHHHhhcccCCcEEEeccCCCCC----------------CCHHHHHHHhcCCCCcEEEEc
Q 012553 397 HEPVNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEVVFQALL 445 (461)
Q Consensus 397 ~~~~~~L~eaV~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIF~L 445 (461)
.....++.++++ ++|++|=+.+..+. -|..+++++.+..-+-|||.=
T Consensus 90 l~d~~~~~~~~~--~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~S 152 (352)
T 1sb8_A 90 IRNLDDCNNACA--GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAA 152 (352)
T ss_dssp TTSHHHHHHHHT--TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCCHHHHHHHhc--CCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEec
Confidence 111235777787 49999988875431 134566777665545677753
No 455
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=58.58 E-value=9.1 Score=39.85 Aligned_cols=40 Identities=23% Similarity=0.305 Sum_probs=30.5
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCcc
Q 012553 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (461)
Q Consensus 327 ~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi 378 (461)
.+-.+..|||+|||.||+..|-.+.+ .|. ++.++++...+
T Consensus 122 ~~~~~~DVvVVGaG~aGl~aA~~la~-----~G~-------~V~vlEk~~~~ 161 (571)
T 1y0p_A 122 APHDTVDVVVVGSGGAGFSAAISATD-----SGA-------KVILIEKEPVI 161 (571)
T ss_dssp CCSEECSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSSS
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHH-----CCC-------cEEEEeCCCCC
Confidence 34456789999999999999987754 363 68889887544
No 456
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=58.55 E-value=18 Score=35.03 Aligned_cols=56 Identities=13% Similarity=0.170 Sum_probs=35.7
Q ss_pred chhHHHHHHHHHHHHHhCCCccc--ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 309 GTASVVLAGVVAALKLIGGTLAE--HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 309 GTaaV~LAgll~Alk~~g~~l~d--~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
++-...++..+.|+.-.+.--.+ ++++|.|| |..|..++.++.. .|. ++++.+|+.
T Consensus 137 a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~-----~Ga------~~Vi~~~~~ 195 (357)
T 2zb4_A 137 GAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHF-----LGC------SRVVGICGT 195 (357)
T ss_dssp TTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHH-----TTC------SEEEEEESC
T ss_pred HhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHH-----CCC------CeEEEEeCC
Confidence 33334455556666333333356 89999998 9888888776653 252 368888763
No 457
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=58.29 E-value=17 Score=34.73 Aligned_cols=108 Identities=19% Similarity=0.168 Sum_probs=57.1
Q ss_pred CCcccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCcc---ccCCcCCCChhh------hhhcc-
Q 012553 327 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI---VSSRKDSLQHFK------KPWAH- 395 (461)
Q Consensus 327 ~~l~d~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi---~~~R~~~L~~~k------~~fA~- 395 (461)
.+++..+|+|.|| |-.|..+++.|++. ..| -+++.+|+..-- ...+.+.+.... ..+..
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~---~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQEN---HPK-------AKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAA 75 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHH---CTT-------SEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEEC
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhh---CCC-------CeEEEEECCCccccccccchhhhhhhhhccccCceEEEC
Confidence 3577889999976 88888888888651 014 378888874310 000001111111 01111
Q ss_pred ccCCCCCHHHhhcccCCcEEEeccCCCCC--------------CCHHHHHHHhcCCCCcEEEEcC
Q 012553 396 EHEPVNNLLDAVKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEVVFQALLW 446 (461)
Q Consensus 396 ~~~~~~~L~eaV~~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIF~Ls 446 (461)
+-....++.++ ...++|++|=+.+.... -|..+++++.+..-+ |||.=|
T Consensus 76 Dl~d~~~~~~~-~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS 138 (362)
T 3sxp_A 76 DINNPLDLRRL-EKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASS 138 (362)
T ss_dssp CTTCHHHHHHH-TTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEE
T ss_pred CCCCHHHHHHh-hccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCc
Confidence 11111235554 23369999977764421 124567777665555 777644
No 458
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=58.25 E-value=6.1 Score=36.16 Aligned_cols=77 Identities=25% Similarity=0.344 Sum_probs=43.8
Q ss_pred CCcccceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhc-------cccC
Q 012553 327 GTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-------HEHE 398 (461)
Q Consensus 327 ~~l~d~riv~~GAGs-AgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA-------~~~~ 398 (461)
.++++.+++|.||+. .|.++|+.+++ .| -+++++|++- +.+....+.+. -+..
T Consensus 5 m~l~~k~vlITGas~gIG~~~a~~l~~-----~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~ 65 (261)
T 3n74_A 5 MSLEGKVALITGAGSGFGEGMAKRFAK-----GG-------AKVVIVDRDK-------AGAERVAGEIGDAALAVAADIS 65 (261)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESCH-------HHHHHHHHHHCTTEEEEECCTT
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHH-----CC-------CEEEEEcCCH-------HHHHHHHHHhCCceEEEEecCC
Confidence 467889999999853 46666666654 25 2688888741 11222222211 1111
Q ss_pred CCCCHHHhhccc-----CCcEEEeccCCC
Q 012553 399 PVNNLLDAVKVI-----KPTILIGSSGVG 422 (461)
Q Consensus 399 ~~~~L~eaV~~v-----kptvLIG~S~~~ 422 (461)
...++.++++.+ ++|+||=..+..
T Consensus 66 ~~~~~~~~~~~~~~~~g~id~li~~Ag~~ 94 (261)
T 3n74_A 66 KEADVDAAVEAALSKFGKVDILVNNAGIG 94 (261)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 223455566554 799999776653
No 459
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=58.15 E-value=11 Score=35.74 Aligned_cols=37 Identities=16% Similarity=0.225 Sum_probs=27.0
Q ss_pred CCcccceEEEeCcc---hHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 327 GTLAEHRFLFLGAG---EAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 327 ~~l~d~riv~~GAG---sAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.++++.++||.||+ -.|.+||+.+++ .|. +++++|++
T Consensus 26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~-----~G~-------~V~~~~r~ 65 (296)
T 3k31_A 26 MLMEGKKGVIIGVANDKSLAWGIAKAVCA-----QGA-------EVALTYLS 65 (296)
T ss_dssp CTTTTCEEEEECCCSTTSHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred hccCCCEEEEEeCCCCCCHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 45788999999996 355557777764 253 68888875
No 460
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=58.12 E-value=22 Score=32.54 Aligned_cols=77 Identities=13% Similarity=0.199 Sum_probs=41.6
Q ss_pred CCCcccceEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHH
Q 012553 326 GGTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLL 404 (461)
Q Consensus 326 g~~l~d~riv~~GAG-sAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~ 404 (461)
..++++.+++|.||+ -.|.++|+.+++ .|. +++++|++- + .+.... .+.-+-....++.
T Consensus 10 ~~~l~~k~vlVTGas~gIG~~ia~~l~~-----~G~-------~V~~~~r~~----~---~~~~~~-~~~~D~~~~~~~~ 69 (247)
T 1uzm_A 10 KPPFVSRSVLVTGGNRGIGLAIAQRLAA-----DGH-------KVAVTHRGS----G---APKGLF-GVEVDVTDSDAVD 69 (247)
T ss_dssp CCCCCCCEEEETTTTSHHHHHHHHHHHH-----TTC-------EEEEEESSS----C---CCTTSE-EEECCTTCHHHHH
T ss_pred cccCCCCEEEEeCCCCHHHHHHHHHHHH-----CCC-------EEEEEeCCh----H---HHHHhc-CeeccCCCHHHHH
Confidence 346788899999974 344555555543 252 688888742 1 121111 1111212223355
Q ss_pred Hhhccc-----CCcEEEeccCCC
Q 012553 405 DAVKVI-----KPTILIGSSGVG 422 (461)
Q Consensus 405 eaV~~v-----kptvLIG~S~~~ 422 (461)
++++.+ ++|+||=..+..
T Consensus 70 ~~~~~~~~~~g~id~lv~~Ag~~ 92 (247)
T 1uzm_A 70 RAFTAVEEHQGPVEVLVSNAGLS 92 (247)
T ss_dssp HHHHHHHHHHSSCSEEEEECSCC
T ss_pred HHHHHHHHHcCCCCEEEECCCCC
Confidence 555543 689999777654
No 461
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=57.88 E-value=15 Score=35.50 Aligned_cols=37 Identities=24% Similarity=0.156 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHH
Q 012553 314 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIA 351 (461)
Q Consensus 314 ~LAgll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~ 351 (461)
.++..+.|++..+.+ ..++|+|.|||..|...+.+..
T Consensus 153 ~~~ta~~al~~~~~~-~g~~VlV~GaG~vG~~a~qla~ 189 (352)
T 1e3j_A 153 PLSVGVHACRRAGVQ-LGTTVLVIGAGPIGLVSVLAAK 189 (352)
T ss_dssp HHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHH
T ss_pred hHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHH
Confidence 444455666554432 5689999999988877766553
No 462
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=57.87 E-value=7 Score=38.90 Aligned_cols=34 Identities=18% Similarity=0.314 Sum_probs=25.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
+.+|+|+|||.+|+..|..|.+. |. ++.++++..
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~-----g~-------~v~v~E~~~ 49 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSR-----GT-------DAVLLESSA 49 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTT-----TC-------CEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEEcCC
Confidence 35799999999999999888642 53 577777653
No 463
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=57.81 E-value=8.1 Score=40.63 Aligned_cols=35 Identities=29% Similarity=0.489 Sum_probs=28.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCc
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GL 377 (461)
...|+|+|||.+|+++|-.+.. .|+ ++.++|+..+
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~-----rG~-------~V~LlE~~~~ 66 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAA-----SGI-------KTGLIEMQDF 66 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCCC
Confidence 4579999999999999988865 264 6889997643
No 464
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=57.73 E-value=6.1 Score=36.31 Aligned_cols=36 Identities=22% Similarity=0.294 Sum_probs=23.8
Q ss_pred CcccceEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 328 TLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 328 ~l~d~riv~~GAG-sAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
++++.+++|.||+ -.|.++|+.+++ .|. +++++|++
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~-----~G~-------~V~~~~r~ 39 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLG-----EGA-------KVAFSDIN 39 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHH-----TTC-------EEEEECSC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 5778899999974 445556665543 252 68888764
No 465
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=57.63 E-value=8 Score=38.93 Aligned_cols=33 Identities=18% Similarity=0.376 Sum_probs=26.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
+-.|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~-----~G~-------~V~liEk~ 37 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAA-----LGK-------KVAIAEEF 37 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHh-----CCC-------EEEEEeCC
Confidence 3579999999999999988754 253 68899984
No 466
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=57.58 E-value=13 Score=36.18 Aligned_cols=49 Identities=24% Similarity=0.221 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcC
Q 012553 314 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (461)
Q Consensus 314 ~LAgll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs 374 (461)
.++..+.|++..+.+ ..++|+|+|||+.|...+.+... .|. ++++.+|+
T Consensus 156 ~~~ta~~al~~~~~~-~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 204 (356)
T 1pl8_A 156 PLSVGIHACRRGGVT-LGHKVLVCGAGPIGMVTLLVAKA-----MGA------AQVVVTDL 204 (356)
T ss_dssp HHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred hHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 344445566554433 46799999999888877665532 253 46777775
No 467
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=57.39 E-value=6.5 Score=37.83 Aligned_cols=89 Identities=16% Similarity=0.183 Sum_probs=49.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhcccC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vk 411 (461)
.||.|+|+|..|...++.+... .+ .+-+.++|++ .+......+.|- .+ ..++.|+++.-+
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~----~~------~~l~av~d~~-------~~~~~~~~~~~~--~~-~~~~~~~l~~~~ 63 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGN----AD------ARLVAVADAF-------PAAAEAIAGAYG--CE-VRTIDAIEAAAD 63 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC----TT------EEEEEEECSS-------HHHHHHHHHHTT--CE-ECCHHHHHHCTT
T ss_pred eEEEEECCCHHHHHHHHHHhhC----CC------cEEEEEECCC-------HHHHHHHHHHhC--CC-cCCHHHHhcCCC
Confidence 5899999999888777655431 12 1223366662 111222222221 12 578999998767
Q ss_pred CcEEEeccCCCCCCCHHHHHHHhcCCCCcEEE
Q 012553 412 PTILIGSSGVGRTFTKEVIEAMASFNEVVFQA 443 (461)
Q Consensus 412 ptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 443 (461)
+|+++ +++++ ....++++...+. .++++.
T Consensus 64 ~D~V~-i~tp~-~~h~~~~~~al~~-gk~v~~ 92 (331)
T 4hkt_A 64 IDAVV-ICTPT-DTHADLIERFARA-GKAIFC 92 (331)
T ss_dssp CCEEE-ECSCG-GGHHHHHHHHHHT-TCEEEE
T ss_pred CCEEE-EeCCc-hhHHHHHHHHHHc-CCcEEE
Confidence 89887 44444 3445555544332 245443
No 468
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=57.38 E-value=15 Score=36.96 Aligned_cols=117 Identities=17% Similarity=0.100 Sum_probs=66.3
Q ss_pred CcccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCC---cCCCChhhhhhccccCCCCCH
Q 012553 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSR---KDSLQHFKKPWAHEHEPVNNL 403 (461)
Q Consensus 328 ~l~d~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R---~~~L~~~k~~fA~~~~~~~~L 403 (461)
..+-.||.|+|| |..|-.+|-+|... .=+.... ...+.|+|...-...-. .| |++---+.........+.
T Consensus 21 s~~~vKVaViGAaG~IG~~la~~la~~----~l~~~~~-~~eL~L~Di~~~~~~~~Gva~D-L~~~~~~~~~~~~~~~~~ 94 (345)
T 4h7p_A 21 SMSAVKVAVTGAAGQIGYALVPLIARG----ALLGPTT-PVELRLLDIEPALKALAGVEAE-LEDCAFPLLDKVVVTADP 94 (345)
T ss_dssp -CCCEEEEEESTTSHHHHHHHHHHHHT----TTTCTTC-CEEEEEECCGGGHHHHHHHHHH-HHHTTCTTEEEEEEESCH
T ss_pred CCCCCEEEEECcCcHHHHHHHHHHHhc----cccCCCC-ccEEEEECCCCccccchhhhhh-hhhcCccCCCcEEEcCCh
Confidence 355679999997 99999888877652 0011111 23688999632111000 01 222111111111112568
Q ss_pred HHhhcccCCcEEEeccCCC---CC-----------CCHHHHHHHhcCC-CCcEEEEcCCCCchh
Q 012553 404 LDAVKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFN-EVVFQALLWLIRKFN 452 (461)
Q Consensus 404 ~eaV~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~-erPIIF~Lsnp~~~~ 452 (461)
.+++++ .|++|=+.+.+ |- +=+++.+.+++++ ..-+|+-.+||-+.+
T Consensus 95 ~~a~~~--advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPvd~~ 156 (345)
T 4h7p_A 95 RVAFDG--VAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPANTN 156 (345)
T ss_dssp HHHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHH
T ss_pred HHHhCC--CCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCcchH
Confidence 899998 89998665544 31 1244566666665 566888999997654
No 469
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=57.32 E-value=8.3 Score=35.38 Aligned_cols=35 Identities=31% Similarity=0.379 Sum_probs=23.6
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 329 l~d~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
+++.+++|.|| |-.|.++|+.+++ .|. +++++|+.
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~-----~G~-------~V~~~~r~ 37 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLAR-----AGA-------NIVLNGFG 37 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 56788999998 4556666666654 253 68887764
No 470
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=57.32 E-value=23 Score=34.45 Aligned_cols=46 Identities=20% Similarity=0.168 Sum_probs=31.0
Q ss_pred HHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcC
Q 012553 317 GVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (461)
Q Consensus 317 gll~Alk~~g~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs 374 (461)
..+.|++..+....+++|+|.|||..|...+.+.... | | +++.+|+
T Consensus 167 ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~-----G-----a--~Vi~~~~ 212 (357)
T 2cf5_A 167 TVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAM-----G-----H--HVTVISS 212 (357)
T ss_dssp HHHHHHHHTSTTSTTCEEEEECCSHHHHHHHHHHHHH-----T-----C--EEEEEES
T ss_pred HHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHC-----C-----C--eEEEEeC
Confidence 3345666555443678999999998888877655432 5 2 5777775
No 471
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=57.23 E-value=15 Score=33.77 Aligned_cols=36 Identities=17% Similarity=0.297 Sum_probs=26.0
Q ss_pred CcccceEEEeCcc-h--HHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 328 TLAEHRFLFLGAG-E--AGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 328 ~l~d~riv~~GAG-s--AgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
++++.++||.||+ . .|.++|+.+++ .|. +++++|+.
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~-----~G~-------~V~~~~r~ 42 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSLHE-----AGA-------RLIFTYAG 42 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHHHH-----CCC-------EEEEecCc
Confidence 5788899999985 3 56667777764 253 68888775
No 472
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=57.21 E-value=7.1 Score=40.98 Aligned_cols=33 Identities=27% Similarity=0.410 Sum_probs=27.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
+--|||+|||.+|+++|..+.. .|+ ++.++++.
T Consensus 18 ~~DVvVIGgGi~Gl~~A~~La~-----~G~-------~V~LlEk~ 50 (561)
T 3da1_A 18 QLDLLVIGGGITGAGIALDAQV-----RGI-------QTGLVEMN 50 (561)
T ss_dssp CEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CCC-------cEEEEECC
Confidence 4579999999999999987764 364 68889886
No 473
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=57.20 E-value=16 Score=34.69 Aligned_cols=102 Identities=14% Similarity=0.078 Sum_probs=58.3
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCCh-----hhhhhcc-ccCCCC
Q 012553 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH-----FKKPWAH-EHEPVN 401 (461)
Q Consensus 329 l~d~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~-----~k~~fA~-~~~~~~ 401 (461)
+++.+|+|.|| |-.|..+++.|+.. | -+++.+|+.. .+...+.. .+..+.. +.....
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 70 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTM-----G-------ATVKGYSLTA----PTVPSLFETARVADGMQSEIGDIRDQN 70 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEESSC----SSSSCHHHHTTTTTTSEEEECCTTCHH
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhC-----C-------CeEEEEeCCC----cccchhhHhhccCCceEEEEccccCHH
Confidence 45678999996 88888898888652 5 2688888742 11111100 0111111 111223
Q ss_pred CHHHhhcccCCcEEEeccCCCCC----------------CCHHHHHHHhcCC-CCcEEEEcC
Q 012553 402 NLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFN-EVVFQALLW 446 (461)
Q Consensus 402 ~L~eaV~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~-erPIIF~Ls 446 (461)
++.++++.+++|++|=+.+.... -|..+++++.+.. -+.|||.=|
T Consensus 71 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 132 (357)
T 1rkx_A 71 KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITS 132 (357)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECC
T ss_pred HHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecC
Confidence 57778887789999988775321 0233566655543 457777544
No 474
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=57.11 E-value=7.9 Score=41.29 Aligned_cols=34 Identities=26% Similarity=0.398 Sum_probs=27.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
..+|||+|||.||+..|..+.. .| .++.++|+..
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~-----~g-------~~V~lie~~~ 406 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAA-----RG-------HQVTLFDAHS 406 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-----TT-------CEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCCC
Confidence 4689999999999999988854 24 3699999864
No 475
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=56.95 E-value=18 Score=35.44 Aligned_cols=37 Identities=22% Similarity=0.243 Sum_probs=26.2
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcC
Q 012553 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (461)
Q Consensus 327 ~~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs 374 (461)
.--.+++|+|+|||+.|...+.+... .|. ++++.+|+
T Consensus 190 ~~~~g~~VlV~GaG~vG~~a~q~a~~-----~Ga------~~Vi~~~~ 226 (378)
T 3uko_A 190 KVEPGSNVAIFGLGTVGLAVAEGAKT-----AGA------SRIIGIDI 226 (378)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHH-----HTC------SCEEEECS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 33457899999999888877665543 253 47888874
No 476
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=56.91 E-value=7.2 Score=38.79 Aligned_cols=108 Identities=10% Similarity=0.102 Sum_probs=50.8
Q ss_pred HHHhCCCccc-ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCC
Q 012553 322 LKLIGGTLAE-HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV 400 (461)
Q Consensus 322 lk~~g~~l~d-~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~ 400 (461)
-.+.....++ .||-|+|+|..|..-++.+...-.. -....+-.+=+-++|+. .+......+.|-- ..-.
T Consensus 16 ~~~~~~~Ms~klrvgiIG~G~ig~~h~~~~~~~~~~--~~~~~~~~elvav~d~~-------~~~a~~~a~~~~~-~~~y 85 (412)
T 4gqa_A 16 ENLYFQSMSARLNIGLIGSGFMGQAHADAYRRAAMF--YPDLPKRPHLYALADQD-------QAMAERHAAKLGA-EKAY 85 (412)
T ss_dssp ---------CEEEEEEECCSHHHHHHHHHHHHHHHH--CTTSSSEEEEEEEECSS-------HHHHHHHHHHHTC-SEEE
T ss_pred ccCccccccccceEEEEcCcHHHHHHHHHHHhcccc--ccccCCCeEEEEEEcCC-------HHHHHHHHHHcCC-CeEE
Confidence 3344445555 6999999998887665555443111 00001111223456652 1112222222211 0123
Q ss_pred CCHHHhhcccCCcEEEeccCCCCCCCHHH-HHHHhc----CCCCcE
Q 012553 401 NNLLDAVKVIKPTILIGSSGVGRTFTKEV-IEAMAS----FNEVVF 441 (461)
Q Consensus 401 ~~L~eaV~~vkptvLIG~S~~~g~Ft~ev-v~~Ma~----~~erPI 441 (461)
.++.|.++.-++|+++ ++++. .+-.++ +++|.+ .+|+|+
T Consensus 86 ~d~~~ll~~~~vD~V~-I~tp~-~~H~~~~~~al~aGkhVl~EKP~ 129 (412)
T 4gqa_A 86 GDWRELVNDPQVDVVD-ITSPN-HLHYTMAMAAIAAGKHVYCEKPL 129 (412)
T ss_dssp SSHHHHHHCTTCCEEE-ECSCG-GGHHHHHHHHHHTTCEEEEESCS
T ss_pred CCHHHHhcCCCCCEEE-ECCCc-HHHHHHHHHHHHcCCCeEeecCC
Confidence 6899999987889877 66655 344444 444544 245554
No 477
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=56.91 E-value=9.2 Score=37.92 Aligned_cols=34 Identities=24% Similarity=0.504 Sum_probs=26.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
+.+|+|+|||.+|+..|..|.+. | .++.++|+..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~-----g-------~~v~v~E~~~ 36 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEK-----G-------HQVHIIDQRD 36 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-----T-------CEEEEEESSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-----C-------CcEEEEEecC
Confidence 46899999999999999988642 4 3677777753
No 478
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=56.86 E-value=8.7 Score=40.11 Aligned_cols=33 Identities=21% Similarity=0.321 Sum_probs=26.7
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcC
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs 374 (461)
.+.+|+|+|||+||+..|..+.+. |. ++.++|+
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~-----g~-------~v~liE~ 138 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKY-----GA-------KTAVLDY 138 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECC
T ss_pred ccccEEEECCCccHHHHHHHHHhC-----CC-------eEEEEec
Confidence 356899999999999999888652 53 6888885
No 479
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=56.63 E-value=8.9 Score=35.32 Aligned_cols=36 Identities=19% Similarity=0.277 Sum_probs=24.3
Q ss_pred CcccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 328 ~l~d~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
++++.+++|.|| |-.|.++|+.+++ .|. +++++|++
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~-----~G~-------~V~~~~r~ 38 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVA-----AGA-------RVVLADVL 38 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHH-----TTC-------EEEEEESC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 467789999997 4455566666543 252 68888764
No 480
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=56.59 E-value=7.6 Score=43.97 Aligned_cols=34 Identities=24% Similarity=0.367 Sum_probs=28.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
+.+|+|+|||.||+..|..+... |. +++.++|++
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~-----G~------~~Vtv~E~~ 220 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARL-----GY------SDITIFEKQ 220 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHT-----TC------CCEEEEESS
T ss_pred CCEEEEECccHHHHHHHHHHHhc-----CC------CcEEEEeCC
Confidence 56899999999999999998653 53 268999986
No 481
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=56.48 E-value=7.8 Score=44.44 Aligned_cols=42 Identities=19% Similarity=0.300 Sum_probs=33.6
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 328 ~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
+|++.||+++|||.-|.-+++.|+.+ |+.... ..+|.++|.+
T Consensus 422 kL~~~~VlvVGaGGlGsevlk~La~~-----Gv~~g~-~G~i~lvD~D 463 (1015)
T 3cmm_A 422 KIANSKVFLVGSGAIGCEMLKNWALL-----GLGSGS-DGYIVVTDND 463 (1015)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHH-----TTTCST-TCEEEEECCC
T ss_pred HHhcCeEEEEecCHHHHHHHHHHHHc-----CcCcCC-CCeEEEEeCC
Confidence 46779999999999999999999876 652211 2689999986
No 482
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=56.33 E-value=6.5 Score=40.55 Aligned_cols=21 Identities=29% Similarity=0.313 Sum_probs=18.5
Q ss_pred eEEEeCcchHHHHHHHHHHHH
Q 012553 333 RFLFLGAGEAGTGIAELIALE 353 (461)
Q Consensus 333 riv~~GAGsAgiGiA~ll~~~ 353 (461)
-||++|||.+|+++|-.|.+.
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~ 61 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDA 61 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHH
T ss_pred cEEEEcccHHHHHHHHHHHhc
Confidence 489999999999999888665
No 483
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=56.30 E-value=6.9 Score=38.21 Aligned_cols=36 Identities=28% Similarity=0.415 Sum_probs=29.7
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 328 ~l~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
++++.+|||+|+|..|..-++.|+.+ | .++.++|.+
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~-----G-------a~VtViap~ 45 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPT-----G-------CKLTLVSPD 45 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGG-----T-------CEEEEEEEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhC-----C-------CEEEEEcCC
Confidence 57889999999999999999998763 5 368888864
No 484
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=56.07 E-value=6 Score=38.30 Aligned_cols=90 Identities=14% Similarity=0.102 Sum_probs=49.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhcccC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vk 411 (461)
.||.|+|+|..|...++.+... .+ .+-+.++|++- +......+.|- .....++.|+++.-+
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~----~~------~~l~av~d~~~-------~~~~~~a~~~g--~~~~~~~~~~l~~~~ 65 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAAN----PD------LELVVIADPFI-------EGAQRLAEANG--AEAVASPDEVFARDD 65 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC----TT------EEEEEEECSSH-------HHHHHHHHTTT--CEEESSHHHHTTCSC
T ss_pred eEEEEECCcHHHHHHHHHHHhC----CC------cEEEEEECCCH-------HHHHHHHHHcC--CceeCCHHHHhcCCC
Confidence 5899999999888777665431 12 12233666531 11111222221 122368999999767
Q ss_pred CcEEEeccCCCCCCCHHHHHHHhcCCCCcEEE
Q 012553 412 PTILIGSSGVGRTFTKEVIEAMASFNEVVFQA 443 (461)
Q Consensus 412 ptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 443 (461)
+|+++ +++++ ....++++...+.. ++|+.
T Consensus 66 ~D~V~-i~tp~-~~h~~~~~~al~~g-k~v~~ 94 (344)
T 3euw_A 66 IDGIV-IGSPT-STHVDLITRAVERG-IPALC 94 (344)
T ss_dssp CCEEE-ECSCG-GGHHHHHHHHHHTT-CCEEE
T ss_pred CCEEE-EeCCc-hhhHHHHHHHHHcC-CcEEE
Confidence 89888 44444 35555555544322 44443
No 485
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=55.95 E-value=5.3 Score=36.65 Aligned_cols=97 Identities=14% Similarity=0.069 Sum_probs=54.8
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhcc-ccCCCCCHHHhhccc
Q 012553 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 410 (461)
Q Consensus 333 riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~v 410 (461)
+|+|.|| |-.|..+++.|+.. ..| -+++.++++. .+...+......+.. +-....++.+++++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~- 66 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKK---VPA-------SQIIAIVRNV----EKASTLADQGVEVRHGDYNQPESLQKAFAG- 66 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTT---SCG-------GGEEEEESCT----TTTHHHHHTTCEEEECCTTCHHHHHHHTTT-
T ss_pred eEEEEcCCchHHHHHHHHHHHh---CCC-------CeEEEEEcCH----HHHhHHhhcCCeEEEeccCCHHHHHHHHhc-
Confidence 6899998 88898888877531 002 3677777641 110001110111111 11222457788886
Q ss_pred CCcEEEeccCCCC------CCCHHHHHHHhcCCCCcEEEEc
Q 012553 411 KPTILIGSSGVGR------TFTKEVIEAMASFNEVVFQALL 445 (461)
Q Consensus 411 kptvLIG~S~~~g------~Ft~evv~~Ma~~~erPIIF~L 445 (461)
+|++|=+++... .-+..+++++.+..-+.|||.=
T Consensus 67 -~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~S 106 (287)
T 2jl1_A 67 -VSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTG 106 (287)
T ss_dssp -CSEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred -CCEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEEC
Confidence 899998876431 1235677777766556777753
No 486
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=55.72 E-value=23 Score=33.90 Aligned_cols=50 Identities=16% Similarity=0.198 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHhCCCcccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcC
Q 012553 313 VVLAGVVAALKLIGGTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (461)
Q Consensus 313 V~LAgll~Alk~~g~~l~d~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs 374 (461)
+.++..+.|+.-...--.+++++|.|| |..|..++.++.. .| | +++.+|+
T Consensus 132 ~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~-----~G-----a--~Vi~~~~ 182 (336)
T 4b7c_A 132 MTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARL-----KG-----C--RVVGIAG 182 (336)
T ss_dssp HHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHH-----TT-----C--EEEEEES
T ss_pred cHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHH-----CC-----C--EEEEEeC
Confidence 445555666644444456789999999 9888888776643 25 2 6777775
No 487
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=55.65 E-value=23 Score=31.85 Aligned_cols=37 Identities=24% Similarity=0.272 Sum_probs=24.6
Q ss_pred CCcccceEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 327 GTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 327 ~~l~d~riv~~GAG-sAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
..+++.+++|.||+ -.|.++|+.+++ .|. +++++|++
T Consensus 10 ~~l~~k~vlITGas~gIG~~ia~~l~~-----~G~-------~V~~~~r~ 47 (247)
T 3i1j_A 10 ELLKGRVILVTGAARGIGAAAARAYAA-----HGA-------SVVLLGRT 47 (247)
T ss_dssp TTTTTCEEEESSTTSHHHHHHHHHHHH-----TTC-------EEEEEESC
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHH-----CCC-------EEEEEecC
Confidence 35788999999984 345555555543 252 68888874
No 488
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=55.60 E-value=9.8 Score=35.46 Aligned_cols=77 Identities=13% Similarity=0.133 Sum_probs=43.1
Q ss_pred CCcccceEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhc-------cccC
Q 012553 327 GTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-------HEHE 398 (461)
Q Consensus 327 ~~l~d~riv~~GAG-sAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA-------~~~~ 398 (461)
.+++++++||-||+ -.|.++|+.+++ .|. +++++|++- +.+....+.+. -+-.
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~-----~G~-------~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~Dv~ 67 (271)
T 3tzq_B 7 AELENKVAIITGACGGIGLETSRVLAR-----AGA-------RVVLADLPE-------TDLAGAAASVGRGAVHHVVDLT 67 (271)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHH-----TTC-------EEEEEECTT-------SCHHHHHHHHCTTCEEEECCTT
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHH-----CCC-------EEEEEcCCH-------HHHHHHHHHhCCCeEEEECCCC
Confidence 36788899999974 345556665543 252 688888741 22322222221 0111
Q ss_pred CCCCHHHhhccc-----CCcEEEeccCCC
Q 012553 399 PVNNLLDAVKVI-----KPTILIGSSGVG 422 (461)
Q Consensus 399 ~~~~L~eaV~~v-----kptvLIG~S~~~ 422 (461)
...++.++++.+ +.|+||=..+..
T Consensus 68 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 96 (271)
T 3tzq_B 68 NEVSVRALIDFTIDTFGRLDIVDNNAAHS 96 (271)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 123455555544 799999776654
No 489
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=55.45 E-value=20 Score=34.41 Aligned_cols=50 Identities=10% Similarity=0.041 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHhCCCcccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcC
Q 012553 313 VVLAGVVAALKLIGGTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (461)
Q Consensus 313 V~LAgll~Alk~~g~~l~d~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs 374 (461)
+.++..+.|+.-....-.+++++|.|| |..|..++.++.. .| | +++.+|+
T Consensus 138 ~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~-----~G-----~--~V~~~~~ 188 (345)
T 2j3h_A 138 MPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKM-----MG-----C--YVVGSAG 188 (345)
T ss_dssp HHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHH-----TT-----C--EEEEEES
T ss_pred ccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHH-----CC-----C--EEEEEeC
Confidence 344445555533333345789999997 9899888876653 25 2 5777765
No 490
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=55.39 E-value=8.6 Score=41.32 Aligned_cols=38 Identities=24% Similarity=0.413 Sum_probs=27.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
+..|+|+|||.||+..|-.|.....+..|+ ++.++|++
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi-------~v~viE~~ 45 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDL-------KVRIIDKR 45 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTC-------CEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCC-------CEEEEeCC
Confidence 457999999999999998887621111365 57788865
No 491
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=55.35 E-value=9.6 Score=40.55 Aligned_cols=33 Identities=12% Similarity=0.107 Sum_probs=27.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
..|||+|||.||+.+|-.+.+ .| .++.++|+..
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~-----~G-------~~V~vlEk~~ 305 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLR-----RG-------WQVTLYCADE 305 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----TT-------CEEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 689999999999999988764 25 3799999853
No 492
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=55.20 E-value=5.2 Score=38.81 Aligned_cols=93 Identities=10% Similarity=0.076 Sum_probs=50.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCChhhhhhccccCCCCCHHHhhcccC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vk 411 (461)
.||.|+|+|..|...++.+... ..| .+-+.++|++ .+......+.|-.......++.|+++.-+
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~---~~~------~~l~av~d~~-------~~~~~~~~~~~g~~~~~~~~~~~ll~~~~ 66 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNK---LSG------AEIVAVTDVN-------QEAAQKVVEQYQLNATVYPNDDSLLADEN 66 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT---CSS------EEEEEEECSS-------HHHHHHHHHHTTCCCEEESSHHHHHHCTT
T ss_pred EEEEEECccHHHHHHHHHHHhh---CCC------cEEEEEEcCC-------HHHHHHHHHHhCCCCeeeCCHHHHhcCCC
Confidence 5899999999888776655421 112 1223456652 11122222222110122478999999877
Q ss_pred CcEEEeccCCCCCCCHHHHHHHhcCCCCcEEE
Q 012553 412 PTILIGSSGVGRTFTKEVIEAMASFNEVVFQA 443 (461)
Q Consensus 412 ptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 443 (461)
+|+++ +++++ ....++++...+.. ++++.
T Consensus 67 ~D~V~-i~tp~-~~h~~~~~~al~~G-k~vl~ 95 (344)
T 3mz0_A 67 VDAVL-VTSWG-PAHESSVLKAIKAQ-KYVFC 95 (344)
T ss_dssp CCEEE-ECSCG-GGHHHHHHHHHHTT-CEEEE
T ss_pred CCEEE-ECCCc-hhHHHHHHHHHHCC-CcEEE
Confidence 89888 44444 45566666554422 44443
No 493
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=55.14 E-value=12 Score=39.10 Aligned_cols=37 Identities=27% Similarity=0.340 Sum_probs=29.2
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCcc
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi 378 (461)
.+-.|||+|||.||+..|-.+.+. |+ ++.++++...+
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~-----G~-------~V~vlEk~~~~ 156 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKA-----GA-------NVILVDKAPFS 156 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEeCCCCC
Confidence 456899999999999999887653 63 68889887544
No 494
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=55.13 E-value=7.5 Score=41.61 Aligned_cols=34 Identities=15% Similarity=0.104 Sum_probs=27.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~G 376 (461)
+..|||+|||.||+.+|-.+.+ .|. ++.++|+..
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~-----~G~-------~V~vlEk~~ 297 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQR-----RGA-------VVTLYCADA 297 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESSS
T ss_pred CCCEEEECCcHHHHHHHHHHHH-----CCC-------cEEEEeCCC
Confidence 3689999999999999987764 353 699999863
No 495
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=55.09 E-value=8.9 Score=38.66 Aligned_cols=30 Identities=23% Similarity=0.503 Sum_probs=24.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 333 riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
||.|+|+|..|..+|..+.. | .+++++|++
T Consensus 2 kI~VIG~G~vG~~~A~~La~------G-------~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL------Q-------NEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT------T-------SEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC------C-------CEEEEEECC
Confidence 79999999999999887742 3 368888874
No 496
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=55.08 E-value=7.9 Score=39.59 Aligned_cols=32 Identities=22% Similarity=0.394 Sum_probs=26.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 332 ~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
..++|+|||+||+..|..+.+ .| .++.++|+.
T Consensus 9 ~DvvVIGgG~aGl~aA~~la~-----~G-------~~V~liE~~ 40 (492)
T 3ic9_A 9 VDVAIIGTGTAGMGAYRAAKK-----HT-------DKVVLIEGG 40 (492)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TC-------SCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CC-------CcEEEEeCC
Confidence 579999999999999987754 25 368899975
No 497
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=54.73 E-value=21 Score=33.43 Aligned_cols=103 Identities=16% Similarity=0.159 Sum_probs=56.7
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCCCccccCCcCCCC----hhhhhhcc-ccCCCCC
Q 012553 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ----HFKKPWAH-EHEPVNN 402 (461)
Q Consensus 329 l~d~riv~~GA-GsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~GLi~~~R~~~L~----~~k~~fA~-~~~~~~~ 402 (461)
-...+|+|.|| |-.|..+++.|++. | -+++.+|+..- ......+. .....+.. +.....+
T Consensus 12 ~~~~~vlVTGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~~ 77 (335)
T 1rpn_A 12 SMTRSALVTGITGQDGAYLAKLLLEK-----G-------YRVHGLVARRS--SDTRWRLRELGIEGDIQYEDGDMADACS 77 (335)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEECCCS--SCCCHHHHHTTCGGGEEEEECCTTCHHH
T ss_pred ccCCeEEEECCCChHHHHHHHHHHHC-----C-------CeEEEEeCCCc--cccccchhhccccCceEEEECCCCCHHH
Confidence 34678999997 88888888887652 4 36888887421 00000000 00111111 1112245
Q ss_pred HHHhhcccCCcEEEeccCCCCC----------------CCHHHHHHHhcCC-CCcEEEEc
Q 012553 403 LLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFN-EVVFQALL 445 (461)
Q Consensus 403 L~eaV~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~-erPIIF~L 445 (461)
+.++++.+++|++|=+.+.... -|..+++++.+.. .+.+||.=
T Consensus 78 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~S 137 (335)
T 1rpn_A 78 VQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQAS 137 (335)
T ss_dssp HHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred HHHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEe
Confidence 7788888889999987765421 1234667776654 26677753
No 498
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=54.57 E-value=12 Score=38.06 Aligned_cols=34 Identities=32% Similarity=0.561 Sum_probs=26.7
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 330 ~d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
.+-+|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~-----g-------~~v~v~E~~ 61 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASS-----G-------QRVLIVDRR 61 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSS
T ss_pred CCCCEEEECccHHHHHHHHHHHHC-----C-------CceEEEecc
Confidence 356899999999999999887542 4 357788875
No 499
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=54.51 E-value=12 Score=34.58 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=25.5
Q ss_pred cccceEEEeCcc---hHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 329 LAEHRFLFLGAG---EAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 329 l~d~riv~~GAG---sAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
+++.++||.||+ -.|.++|+.+++ .|. +++++|++
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~-----~G~-------~V~~~~r~ 44 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHR-----EGA-------ELAFTYQN 44 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHH-----CCC-------EEEEEcCc
Confidence 677899999984 566677777654 253 68888875
No 500
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=54.45 E-value=6.7 Score=41.62 Aligned_cols=33 Identities=18% Similarity=0.213 Sum_probs=26.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhccceEEEEcCC
Q 012553 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (461)
Q Consensus 331 d~riv~~GAGsAgiGiA~ll~~~m~~~~Gls~eeA~~~i~lvDs~ 375 (461)
+.+|||+|||.||+..|-.|.+ .|+ ++.++|+.
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~-----~G~-------kV~VlEr~ 139 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQ-----MGF-------NPIIVERG 139 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHH-----TTC-------CCEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------eEEEEEcc
Confidence 4689999999999999988765 364 57777765
Done!