Query 012555
Match_columns 461
No_of_seqs 147 out of 257
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 11:43:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012555.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012555hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ahq_A ERO1-like protein alpha 100.0 5E-135 2E-139 1056.4 5.3 370 53-433 27-463 (465)
2 3m31_A Endoplasmic oxidoreduct 100.0 2E-123 7E-128 947.5 14.2 349 70-435 8-385 (388)
3 1ash_A Hemoglobin (OXY); oxyge 27.6 61 0.0021 28.8 4.4 53 407-459 66-118 (150)
4 3qrx_B Melittin; calcium-bindi 27.0 19 0.00066 23.3 0.7 11 378-388 1-11 (26)
5 2wfu_A Probable insulin-like p 20.9 18 0.00063 23.6 -0.2 15 72-86 1-18 (26)
6 1pid_A Despentapeptide insulin 20.5 19 0.00064 23.6 -0.3 15 72-86 1-18 (26)
7 2k53_A A3DK08 protein; NESG, C 19.8 89 0.003 24.6 3.5 22 358-385 26-47 (76)
8 2k72_A Matrix metalloproteinas 18.7 14 0.00048 25.2 -1.2 18 110-127 4-21 (37)
9 2wfv_A Probable insulin-like p 16.5 23 0.0008 23.1 -0.5 16 71-86 3-21 (26)
10 2rng_A BIG defensin; alpha-hel 16.5 25 0.00084 28.5 -0.5 55 19-90 14-68 (79)
No 1
>3ahq_A ERO1-like protein alpha; disulfide bond, PDI, redox, hyperactive human ERO1, oxidored; HET: FAD; 2.35A {Homo sapiens} PDB: 3ahr_A*
Probab=100.00 E-value=5.1e-135 Score=1056.41 Aligned_cols=370 Identities=36% Similarity=0.675 Sum_probs=292.3
Q ss_pred CCCCcccccCCCCCCccccccccCcccchhhhhhhhhchhhHHhHHhhcCCCceEEeccCCCCCCCCCCCCCCCCCCCcc
Q 012555 53 NNQTSCHCSSSSQDSVKYTGMVEDCCCDYETVDSVNGEVLHPLLQQLVTTPFFRYFKAKLWCDCPFWPDDGMCRLRDCSV 132 (461)
Q Consensus 53 ~~~~~c~c~~~~~~~~~~~G~vdDc~c~~etId~~N~~~l~P~L~~L~~t~fFRyfKVnL~~~CPFW~dd~~C~~~~C~V 132 (461)
+..+.|||+ ++|+|+||||+|+|||++|+++|+|+|++|+++||||||||||+++||||+|+++|++++|+|
T Consensus 27 ~~~~~c~c~--------~~g~v~Dc~c~~etId~~N~~~i~p~L~~L~~t~fFRyfkVnL~k~CPFW~d~~~C~~~~C~V 98 (465)
T 3ahq_A 27 TAAQRCFCQ--------VSGYLDDCTCDVETIDRFNNYRLFPRLQKLLESDYFRYYKVNLKRPCPFWNDISQCGRRDCAV 98 (465)
T ss_dssp ----CEEEE--------CSSSSCEEECCHHHHHHHHHHTTHHHHHHHHHSHHHHEEEECCCCCCSSCC------------
T ss_pred CCCCCcccC--------CCCccccCcCCHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCCCCCCCCccCCcCCCCCee
Confidence 556789999 999999999999999999998899999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCC----ccccccCCCCcccccccc---hhhhcCccccCCC---CCCCCCCCCCCceEeeC
Q 012555 133 CECPENEFPEPFKKPFHILPSD----DLMCQEGKPEATVDRTLD---KRAFRGWIETDNP---WTNDDETDNGEMTYVNL 202 (461)
Q Consensus 133 ~~c~e~eiP~~wr~~~~~~~~~----~~~c~~~~~~~~vd~tl~---~~~~~~w~~~d~~---~~~dDe~d~~~~~YVDL 202 (461)
++|+|+|||++||++..+++.. ...|++...++.||++++ ..+|.+|.++|++ +|..||+++++++||||
T Consensus 99 ~~c~e~eiP~~wr~~~~~~~~~~~~~~~~c~~~~~lg~vd~tls~~~~~~~~~w~~~dd~~~~fC~~dDe~~~~~~YVdL 178 (465)
T 3ahq_A 99 KPAQSDEVPDGIKSASYKYSEEANNLIEEAEQAERLGAVDESLSEETQKAVLQWTKHDDSSDNFAEADDIQSPEAEYVDL 178 (465)
T ss_dssp ------------------------------CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHTTCC-------CCSCEEEEG
T ss_pred ecCCcccCChhhcccccccchhhccccccccccccccccccccchhhhhhhhccccccCcccccccccCCCCCCceEEec
Confidence 9999999999999975444322 135766667889999988 3578899988764 45444445689999999
Q ss_pred CCCCCCCCCCCCCChhhhHHHHHhhcCCCCCC------------------------CCCC------------CCCCcCCC
Q 012555 203 LLNPERYTGYTGPSARRIWDAVYTENCPKWMA------------------------IVPA------------NPQTRPNP 246 (461)
Q Consensus 203 l~NPERyTGY~G~~A~rIW~aIY~ENCF~~~~------------------------~~~C------------LHaSIsiH 246 (461)
++||||||||+|++|+|||++||+||||++.+ +++| |||||+||
T Consensus 179 l~NPEryTGY~G~~A~rIW~aIY~ENCF~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ClEkrvFyRLISGLHaSIs~H 258 (465)
T 3ahq_A 179 LLNPERYTGYKGPDAWKIWNVIYEENCFKPQTIKRPLNPLASGQGTSEENTFYSWLEGLCVEKRAFYRLISGLHASINVH 258 (465)
T ss_dssp GGSCCCCCCCCHHHHHHHHHHHHTTCCBCC---------------------------CCCBCCHHHHHHHHHHHHHHHHH
T ss_pred ccCcCcccCCCCCcHHHHHHHHHHHhccCccccccccCccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998642 5788 99999999
Q ss_pred CCCC----C---CCCCCCChHHHHHHH------hhhcchhhhHHHHHHHHHHHHHHhhhhhhhhcc--CCCCchhcHHHH
Q 012555 247 PAKT----R---PLRWGKNPELMYDRV------LRYQDRVRNLYFTFLFVLRAVTKATDYLEQAEY--DTGNHEDDLKTV 311 (461)
Q Consensus 247 l~~~----~---~~~wgpNl~~F~~Rv------~~~PeRl~NLYF~Yl~vLRAl~Ka~p~L~~~~f--~tG~~~eD~~t~ 311 (461)
||++ . +|.||||+++|++|| |+|||||+||||+|+||||||+||+|||.++.| +||+..+|.+|+
T Consensus 259 l~~~Yl~~~~~~~~~W~pNl~~F~~R~~~~~t~G~~PeRl~NLYF~Y~lvLRAl~K~~p~l~~~~y~~~tGn~~eD~~tk 338 (465)
T 3ahq_A 259 LSARYLLQETWLEKKWGHNITEFQQRFDGILTEGEGPRRLKNLYFLYLIELRALSKVLPFFERPDFQLFTGNKIQDEENK 338 (465)
T ss_dssp HHHTEEEEECSSCEEEECCHHHHHHHHCHHHHTTHHHHHHHHHHHHHHHHHHHHHHTHHHHHSTTCCCCCSCSSHHHHHH
T ss_pred HHHHHhccccccCCCcCCCHHHHHHHhccccccCCChHHHHhHHHHHHHHHHHHHHhhhhhhhccccccCCChhhhHHHH
Confidence 9998 3 899999999999997 579999999999999999999999999997666 999999999999
Q ss_pred HHHHHHhcCccccccCCCCCccccccCCC--CcchHHHHHHHHhhhhhhhhcCccCCccccccchhhhHHHHHHHHhccc
Q 012555 312 SLMKQLLYNPKLQAACPLPFDEAKLWQGQ--SGPELKQQIQEQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSV 389 (461)
Q Consensus 312 ~lv~~Ll~~~~l~~sc~~~FDE~~lF~~~--~~~~LK~efr~~FrNISrIMDCVgCeKCRLWGKLQt~GLgTALKILFs~ 389 (461)
++|.+|++.. .+||.+|||+.||++. .+.+||+|||+|||||||||||||||||||||||||+||||||||||+.
T Consensus 339 ~~l~~ll~~~---~s~p~~FDE~~lF~~~~~~~~~LKeeFr~~FrNISrIMDCVgCdKCRLWGKLQt~GlgTALKILF~~ 415 (465)
T 3ahq_A 339 MLLLEILHEI---KSFPLHFDENSFFAGDKKEAHKLKEDFRLHFRNISRIMDCVGCFKCRLWGKLQTQGLGTALKILFSE 415 (465)
T ss_dssp HHHHHHHHHH---HHSCEEECTTCTTSCCTHHHHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHH---HhCCCccChHhhcCCcchhHHHHHHHHHHHHHhHhHHhcCCccchhhhhhHHHHHHHHHHHHHHhcc
Confidence 9999999854 4799999999999984 6789999999999999999999999999999999999999999999997
Q ss_pred cCCccc----cccccccchhhHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 012555 390 EGQNHA----AQSQLQLQRNEVIALVNLLNRLSESVKIVHEMGPSIEK 433 (461)
Q Consensus 390 ~~~~~~----~~~~~~L~R~EiVALiNtf~RlS~SI~~v~~f~~~~~~ 433 (461)
++.++. ....++|+|+|||||||||+|||+||++|++|+.|++.
T Consensus 416 ~~~~~~~~~~~~~~~~L~R~ElVALiNtf~RlS~SI~~v~~F~~~~~~ 463 (465)
T 3ahq_A 416 KLIANMPESGPSYEFHLTRQEIVSLFNAFGRISTSVKELENFRNLLQN 463 (465)
T ss_dssp HHHHTCCSSSCCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred CcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 653221 12237899999999999999999999999999888753
No 2
>3m31_A Endoplasmic oxidoreductin-1; disulfide mutant, disulfide bond, electron transport, endopl reticulum, FAD, flavoprotein, glycoprotein; HET: FAD; 1.85A {Saccharomyces cerevisiae} SCOP: a.227.1.1 PDB: 1rp4_A* 1rq1_A* 3nvj_A*
Probab=100.00 E-value=2e-123 Score=947.50 Aligned_cols=349 Identities=28% Similarity=0.541 Sum_probs=287.8
Q ss_pred ccccccCcccchhhhhhhhhchhhHHhHHhhcCCCceEEeccCCCCCCCCCC-CCCCCCCCCccccCCC-CCCCCCCCCC
Q 012555 70 YTGMVEDCCCDYETVDSVNGEVLHPLLQQLVTTPFFRYFKAKLWCDCPFWPD-DGMCRLRDCSVCECPE-NEFPEPFKKP 147 (461)
Q Consensus 70 ~~G~vdDc~c~~etId~~N~~~l~P~L~~L~~t~fFRyfKVnL~~~CPFW~d-d~~C~~~~C~V~~c~e-~eiP~~wr~~ 147 (461)
-+|.|. |++|+|||++|.+ |+|+|++||++||||||||||+++||||+| +|+|++++|+|++|++ ++||++||++
T Consensus 8 ~~~~~~--~~~~~~i~~~N~~-i~p~L~~L~~tdfFryfKVnL~k~CPFW~d~~~~C~~~~CaV~~cd~~~~iP~~w~~~ 84 (388)
T 3m31_A 8 SSGLVP--RGSFNELNAINEN-IRDDLSALLKSDFFKYFRLDLYKQCSFWDANDGLCLNRACSVDVVEDWDTLPEYWQPE 84 (388)
T ss_dssp ---------CHHHHHHHHHHH-HHHHHHHHTTSTTTSEEEEESCCCCSSSCCSSCCCCTTTTBCC----CTTSCGGGSHH
T ss_pred cCCCCC--CCCHHHHHHHHHH-HHHHHHHHhcCCCceeeeecCCCCCCCCCCcCCCCCCCCCeeeeCCCcccCchhhccc
Confidence 467776 5699999999997 899999999999999999999999999998 8999999999999997 9999999975
Q ss_pred C-CCCCCC--------ccccccCCCCcccccccchhhhcCccccCCCCCCCCCCCCCCceEeeCCCCCCCCCCCCCCChh
Q 012555 148 F-HILPSD--------DLMCQEGKPEATVDRTLDKRAFRGWIETDNPWTNDDETDNGEMTYVNLLLNPERYTGYTGPSAR 218 (461)
Q Consensus 148 ~-~~~~~~--------~~~c~~~~~~~~vd~tl~~~~~~~w~~~d~~~~~dDe~d~~~~~YVDLl~NPERyTGY~G~~A~ 218 (461)
. +.++.+ ...|.....+..+++.+ .+...++.||+.||+++++++||||++||||||||+|++|+
T Consensus 85 ~l~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~------~~~d~~~~~c~~dD~~~~~~~YVdLl~NPEryTGY~G~~a~ 158 (388)
T 3m31_A 85 ILGSFNNDTMKEADDSDDECKFLDQLAQTSKKP------VDIEDTINYCDVNDFNGKNAVLIDLTANPERFTGYGGKQAG 158 (388)
T ss_dssp HHTCCCTTTCEECCTTCGGGSBHHHHC-------------------CHHHHTTCCCTTEEEEETTTSCCCCCCBCHHHHH
T ss_pred cccCccccccccccccchhhhhhhhhccccccc------ccccCcCCeecccccCCCCceEeecccCCccccCCCCCchH
Confidence 4 223221 12232211111111111 01123456777666577899999999999999999999999
Q ss_pred hhHHHHHhhcCCCCCCCCCC------------CCCCcCCCCCCC----CCCCCCCChHHHHHHHhhhcchhhhHHHHHHH
Q 012555 219 RIWDAVYTENCPKWMAIVPA------------NPQTRPNPPAKT----RPLRWGKNPELMYDRVLRYQDRVRNLYFTFLF 282 (461)
Q Consensus 219 rIW~aIY~ENCF~~~~~~~C------------LHaSIsiHl~~~----~~~~wgpNl~~F~~Rv~~~PeRl~NLYF~Yl~ 282 (461)
+||++||+||||++..+++| |||||+||||++ .++.||||+++|++||++|||||+||||+|++
T Consensus 159 ~IW~aIY~ENCF~~~~~~~ClEkrvFyrLISGlHaSIs~Hl~~~yl~~~~~~w~pNl~~F~~R~g~~P~Rl~NLYF~Y~l 238 (388)
T 3m31_A 159 QIWSTIYQDNCFTIGETGESLAKDAFYRLVSGFHASIGTHLSKEYLNTKTGKWEPNLDLFMARIGNFPDRVTNMYFNYAV 238 (388)
T ss_dssp HHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHSEECTTTCCEECCHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCCcccccHHHHHHHHHhhhhHHHHHHHHHHHHhCccCCCcCCCHHHHHHHHccchhHHHHHHHHHHH
Confidence 99999999999998888889 999999999998 67999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhhhccCCCCchhcHHHHHHHHHHhcCccccccCCCCCccccccCCCCcchHHHHHHHHhhhhhhhhcC
Q 012555 283 VLRAVTKATDYLEQAEYDTGNHEDDLKTVSLMKQLLYNPKLQAACPLPFDEAKLWQGQSGPELKQQIQEQFRNISALMDC 362 (461)
Q Consensus 283 vLRAl~Ka~p~L~~~~f~tG~~~eD~~t~~lv~~Ll~~~~l~~sc~~~FDE~~lF~~~~~~~LK~efr~~FrNISrIMDC 362 (461)
+||||+||+|||.+++|+| .+|..|+++|.+|++. .+|.+|||+.||+++.+..||+|||+|||||||||||
T Consensus 239 ~lRAl~K~~p~l~~~~~~~---~~d~d~k~~~~~l~~~-----~~~~~FDE~~lF~~~~a~~LKeefr~~FrNISrIMDC 310 (388)
T 3m31_A 239 VAKALWKIQPYLPEFSFAD---LVNKEIKNKMDNVISQ-----LDTKIFNEDLVFANDLSLTLKDEFRSRFKNVTKIMDC 310 (388)
T ss_dssp HHHHHHHHGGGCCCSCSSC---HHHHHHHHHHHHHHHT-----TCCGGGGSCTTCTTTSCHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHhhccCCc---cccHHHHHHHHHHHHH-----hCcCCCCHHHhcCCCchHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999998 4688889999999864 3578999999999999999999999999999999999
Q ss_pred ccCCccccccchhhhHHHHHHHHhccccCCcccccc--ccccchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHh
Q 012555 363 VGCEKCRLWGKLQVLGLGTALKILFSVEGQNHAAQS--QLQLQRNEVIALVNLLNRLSESVKIVHEMGPSIEKIM 435 (461)
Q Consensus 363 VgCeKCRLWGKLQt~GLgTALKILFs~~~~~~~~~~--~~~L~R~EiVALiNtf~RlS~SI~~v~~f~~~~~~~~ 435 (461)
||||||||||||||+||||||||||+.++.+...++ ..+|+|+|||||||||+|||+||++|++|+.|+++-+
T Consensus 311 VgCeKCRLWGKLQt~GlgTALKILF~~~~~~~~~~~~~~~~L~R~EiVAL~Ntf~rlS~SI~~i~~F~~~~~~~~ 385 (388)
T 3m31_A 311 VQCDRCRLWGKIQTTGYATALKILFEINDADEFTKQHIVGKLTKYELIALLQTFGRLSESIESVNMFEKMYGKRL 385 (388)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcchheeehhhhHHHHHHHHHHHhcCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998765432111 1379999999999999999999999999999886543
No 3
>1ash_A Hemoglobin (OXY); oxygen storage; HET: HEM; 2.15A {Ascaris suum} SCOP: a.1.1.2
Probab=27.62 E-value=61 Score=28.75 Aligned_cols=53 Identities=9% Similarity=0.195 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccccCCCcchhhHHHHHHHHhhh
Q 012555 407 VIALVNLLNRLSESVKIVHEMGPSIEKIMEKKISDPSALEFSKWRRMWKSVLA 459 (461)
Q Consensus 407 iVALiNtf~RlS~SI~~v~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (461)
-+.|+|+++-+..+|.-.+.|...++++..+|+....--.+..+..+|..++.
T Consensus 66 ~~rl~~aL~~~i~~lDd~~~L~~~l~~L~~~H~~~g~gV~~e~f~~v~~~Ll~ 118 (150)
T 1ash_A 66 GQKILLACHVLCATYDDRETFNAYTRELLDRHARDHVHMPPEVWTDFWKLFEE 118 (150)
T ss_dssp HHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999876412344566677766543
No 4
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=26.99 E-value=19 Score=23.27 Aligned_cols=11 Identities=45% Similarity=0.918 Sum_probs=9.4
Q ss_pred HHHHHHHHhcc
Q 012555 378 GLGTALKILFS 388 (461)
Q Consensus 378 GLgTALKILFs 388 (461)
|+|.|||+|-.
T Consensus 1 giGa~LKVLa~ 11 (26)
T 3qrx_B 1 GIGAVLKVLTT 11 (26)
T ss_pred CchHHHHHHHc
Confidence 78999999864
No 5
>2wfu_A Probable insulin-like peptide 5 A chain; cleavage on PAIR of basic residues, signaling protein; 1.85A {Drosophila melanogaster}
Probab=20.93 E-value=18 Score=23.63 Aligned_cols=15 Identities=40% Similarity=1.336 Sum_probs=11.0
Q ss_pred ccccCcc---cchhhhhh
Q 012555 72 GMVEDCC---CDYETVDS 86 (461)
Q Consensus 72 G~vdDc~---c~~etId~ 86 (461)
|+||.|| |++..+.+
T Consensus 1 GIVdeCC~~~Cs~~~L~~ 18 (26)
T 2wfu_A 1 GVVDSCCRNSCSFSTLRA 18 (26)
T ss_dssp CHHHHHTSSCBCHHHHHH
T ss_pred CcchhhcCCcCCHHHHHH
Confidence 7889988 66666654
No 6
>1pid_A Despentapeptide insulin; hormone, glucose metabolism; 1.30A {Bos taurus} SCOP: g.1.1.1 PDB: 1bph_A 1aph_A 1dph_A 1cph_A 2a3g_A 2bn1_A 2ins_A 2zp6_A 4e7t_A 4e7u_A 4e7v_A 2bn3_A 2qiu_A 2r34_A 2r35_A 2r36_A 1a7f_A 1ai0_A* 1aiy_A* 1b17_A ...
Probab=20.53 E-value=19 Score=23.63 Aligned_cols=15 Identities=40% Similarity=1.214 Sum_probs=10.9
Q ss_pred ccccCcc---cchhhhhh
Q 012555 72 GMVEDCC---CDYETVDS 86 (461)
Q Consensus 72 G~vdDc~---c~~etId~ 86 (461)
|+||.|| |++..+++
T Consensus 1 GIVdeCC~~~Cs~~~L~~ 18 (26)
T 1pid_A 1 GIVEQCCASVCSLYQLEN 18 (26)
T ss_dssp CHHHHHTTSCCCHHHHHT
T ss_pred CcchhhCCCcCCHHHHHH
Confidence 7889988 66666554
No 7
>2k53_A A3DK08 protein; NESG, CMR9, structural genomics, PSI-2, protein structure initiative; NMR {Clostridium thermocellum atcc 27405}
Probab=19.79 E-value=89 Score=24.58 Aligned_cols=22 Identities=23% Similarity=0.484 Sum_probs=13.9
Q ss_pred hhhcCccCCccccccchhhhHHHHHHHH
Q 012555 358 ALMDCVGCEKCRLWGKLQVLGLGTALKI 385 (461)
Q Consensus 358 rIMDCVgCeKCRLWGKLQt~GLgTALKI 385 (461)
.-|||+||.- ++-.| |..|.+.
T Consensus 26 ~G~~C~gC~~----a~~~t--LeeA~~~ 47 (76)
T 2k53_A 26 NGMHCLGCPS----SMGES--IEDACAV 47 (76)
T ss_dssp TTCCCCSSCC----CCCSB--HHHHHHH
T ss_pred cCCCCCCCCc----ccccc--HHHHHHH
Confidence 3589999975 44444 4566654
No 8
>2k72_A Matrix metalloproteinase-23; toxin, metalloprotease, MMP23, potassium channel, cleavage on PAIR of basic residues, glycoprotein, hydrolase; NMR {Synthetic}
Probab=18.66 E-value=14 Score=25.22 Aligned_cols=18 Identities=22% Similarity=0.672 Sum_probs=15.0
Q ss_pred ccCCCCCCCCCCCCCCCC
Q 012555 110 AKLWCDCPFWPDDGMCRL 127 (461)
Q Consensus 110 VnL~~~CPFW~dd~~C~~ 127 (461)
+|....|+||...|.|..
T Consensus 4 ~D~~~~C~~Wa~~G~C~~ 21 (37)
T 2k72_A 4 LDRIFVCTSWARKGFCDV 21 (37)
T ss_dssp CCCCSCHHHHHTTTTTTT
T ss_pred cCcchhhHHHHhCCccCC
Confidence 466789999999999974
No 9
>2wfv_A Probable insulin-like peptide 5 A chain; signaling protein, cleavage on PAIR of basic residues; 1.85A {Drosophila melanogaster}
Probab=16.48 E-value=23 Score=23.11 Aligned_cols=16 Identities=38% Similarity=1.248 Sum_probs=11.5
Q ss_pred cccccCcc---cchhhhhh
Q 012555 71 TGMVEDCC---CDYETVDS 86 (461)
Q Consensus 71 ~G~vdDc~---c~~etId~ 86 (461)
.|+||.|| |++..+.+
T Consensus 3 rGIvdECC~~~Ct~~~L~~ 21 (26)
T 2wfv_A 3 RGVVDSCCRNSCSFSTLRA 21 (26)
T ss_dssp CHHHHHHTSSCBCHHHHHH
T ss_pred CcchhhhcCCcCCHHHHHH
Confidence 49999998 66665543
No 10
>2rng_A BIG defensin; alpha-helices & beta-sheets, three disulfide bridges, antibiotic, antimicrobial, fungicide, secreted; NMR {Tachypleus tridentatus} PDB: 2rq2_A
Probab=16.47 E-value=25 Score=28.52 Aligned_cols=55 Identities=20% Similarity=0.228 Sum_probs=33.6
Q ss_pred cCCcchHHHHHHHHHHHHhhhhhcccCCccccccCCCCcccccCCCCCCccccccccCcccchhhhhhhhhc
Q 012555 19 GLGRGLWSVWAVIVVLFATAAVTTRTGSKIALFANNQTSCHCSSSSQDSVKYTGMVEDCCCDYETVDSVNGE 90 (461)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~c~~~~~~~~~~~G~vdDc~c~~etId~~N~~ 90 (461)
++..|.|+|++.-+..|+.+.++.. .+++.+|- .-.|--..-|++.|.+|..|+.
T Consensus 14 sp~V~~~Lv~~yGaaAVt~~~i~~~--------~~DshsCa---------nnrGWCR~~Cfs~Ey~D~~~s~ 68 (79)
T 2rng_A 14 GPSVWAYLVALVGAAAVTAANIRRA--------SSDNHSCA---------GNRGWCRSKCFRHEYVDTYYSA 68 (79)
T ss_dssp CHHHHHHHHHHSCHHHHHHTTEEEC--------SSSCCEET---------TTTEEEESSCCTTCEECTTTHH
T ss_pred CHHHHHHHHHHHhHHHHHHhheeec--------cCCccccc---------ccCCcccchhcceeeecccCCc
Confidence 3456888887665555555445444 23444443 1345555667889999888774
Done!