Query 012560
Match_columns 461
No_of_seqs 152 out of 1468
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 03:55:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012560.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012560hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02371 phosphoglucosamine mu 100.0 4.7E-85 1E-89 689.7 49.0 442 1-459 130-582 (583)
2 cd03089 PMM_PGM The phosphoman 100.0 2.5E-81 5.5E-86 646.4 45.5 392 1-443 51-443 (443)
3 PRK14321 glmM phosphoglucosami 100.0 9E-80 1.9E-84 634.6 41.7 397 1-448 51-447 (449)
4 PRK09542 manB phosphomannomuta 100.0 1.2E-78 2.6E-83 625.6 43.8 392 1-445 50-444 (445)
5 cd05803 PGM_like4 This PGM-lik 100.0 1E-78 2.3E-83 626.9 41.6 391 1-439 52-444 (445)
6 cd05800 PGM_like2 This PGM-lik 100.0 8.7E-79 1.9E-83 630.9 40.9 402 1-443 54-461 (461)
7 PRK15414 phosphomannomutase Cp 100.0 2.5E-78 5.3E-83 624.6 40.9 396 1-445 53-456 (456)
8 cd05805 MPG1_transferase GTP-m 100.0 3E-78 6.5E-83 623.2 40.8 392 1-443 49-441 (441)
9 cd03087 PGM_like1 This archaea 100.0 1.5E-77 3.3E-82 618.0 41.6 391 1-443 48-439 (439)
10 COG1109 {ManB} Phosphomannomut 100.0 6.7E-76 1.5E-80 607.2 43.6 401 1-448 59-462 (464)
11 TIGR01132 pgm phosphoglucomuta 100.0 5.3E-75 1.2E-79 610.4 41.2 409 1-445 92-540 (543)
12 PRK07564 phosphoglucomutase; V 100.0 8.7E-75 1.9E-79 608.8 39.7 409 1-447 91-541 (543)
13 cd05801 PGM_like3 This bacteri 100.0 8.8E-75 1.9E-79 606.6 39.1 406 1-442 74-521 (522)
14 cd03085 PGM1 Phosphoglucomutas 100.0 6.8E-75 1.5E-79 607.0 37.6 427 1-459 64-540 (548)
15 PRK10887 glmM phosphoglucosami 100.0 2.4E-74 5.2E-79 593.7 40.6 386 1-445 54-441 (443)
16 PRK14317 glmM phosphoglucosami 100.0 2.7E-74 5.9E-79 596.3 40.4 389 1-447 70-464 (465)
17 PRK14315 glmM phosphoglucosami 100.0 3E-74 6.5E-79 593.8 38.7 386 1-446 57-446 (448)
18 PRK14324 glmM phosphoglucosami 100.0 5.4E-74 1.2E-78 590.7 39.4 388 1-447 54-444 (446)
19 TIGR01455 glmM phosphoglucosam 100.0 1.7E-73 3.8E-78 587.7 39.7 382 1-444 53-442 (443)
20 cd05799 PGM2 This CD includes 100.0 4.9E-73 1.1E-77 591.4 41.4 390 1-428 60-471 (487)
21 PRK14316 glmM phosphoglucosami 100.0 1.4E-73 3E-78 589.6 35.8 388 1-450 55-448 (448)
22 PRK14323 glmM phosphoglucosami 100.0 4.1E-73 8.9E-78 584.5 37.4 379 1-446 57-438 (440)
23 PRK14314 glmM phosphoglucosami 100.0 1.1E-72 2.4E-77 582.4 40.5 387 1-447 57-449 (450)
24 cd05802 GlmM GlmM is a bacteri 100.0 5.9E-73 1.3E-77 582.7 38.1 376 1-439 52-433 (434)
25 PRK14320 glmM phosphoglucosami 100.0 1.2E-72 2.7E-77 581.0 39.4 384 1-446 56-441 (443)
26 PRK14318 glmM phosphoglucosami 100.0 9.2E-73 2E-77 582.7 37.2 384 1-447 59-447 (448)
27 PLN02307 phosphoglucomutase 100.0 3E-72 6.4E-77 587.6 41.2 432 1-459 76-571 (579)
28 PTZ00150 phosphoglucomutase-2- 100.0 1.5E-72 3.2E-77 596.0 36.6 397 1-427 104-548 (584)
29 cd03088 ManB ManB is a bacteri 100.0 1.1E-71 2.3E-76 576.0 39.4 389 1-438 51-457 (459)
30 PRK14322 glmM phosphoglucosami 100.0 4.3E-71 9.3E-76 567.3 41.5 373 1-444 52-428 (429)
31 PRK14319 glmM phosphoglucosami 100.0 6.2E-70 1.3E-74 558.9 38.8 375 1-447 49-426 (430)
32 cd03084 phosphohexomutase The 100.0 2.6E-64 5.5E-69 506.0 35.0 339 24-443 15-355 (355)
33 KOG1220 Phosphoglucomutase/pho 100.0 1.5E-63 3.2E-68 495.1 32.3 407 2-428 118-570 (607)
34 cd03086 PGM3 PGM3 (phosphogluc 100.0 3.6E-57 7.9E-62 468.2 34.0 368 44-443 36-513 (513)
35 PLN02895 phosphoacetylglucosam 100.0 7.4E-51 1.6E-55 419.3 35.8 390 4-446 32-554 (562)
36 PTZ00302 N-acetylglucosamine-p 100.0 6.8E-51 1.5E-55 422.7 31.7 371 43-447 75-582 (585)
37 COG0033 Pgm Phosphoglucomutase 100.0 5.3E-49 1.1E-53 378.6 23.3 415 4-445 72-518 (524)
38 KOG0625 Phosphoglucomutase [Ca 100.0 3.7E-46 8.1E-51 355.0 28.0 428 4-459 72-550 (558)
39 KOG2537 Phosphoglucomutase/pho 99.9 4E-25 8.7E-30 217.3 16.1 294 111-446 186-538 (539)
40 PF02879 PGM_PMM_II: Phosphogl 99.9 3.2E-22 7E-27 165.0 7.8 102 112-219 1-104 (104)
41 PF02880 PGM_PMM_III: Phosphog 99.9 1.7E-21 3.6E-26 162.9 10.3 111 223-347 1-112 (113)
42 PF02878 PGM_PMM_I: Phosphoglu 99.8 2E-19 4.4E-24 155.8 5.5 77 1-83 55-131 (137)
43 PF00408 PGM_PMM_IV: Phosphogl 99.4 3.2E-13 7E-18 103.5 7.3 49 396-444 24-73 (73)
44 cd03086 PGM3 PGM3 (phosphogluc 96.7 0.0013 2.8E-08 69.2 3.6 34 1-34 117-150 (513)
45 PLN02895 phosphoacetylglucosam 94.9 0.023 5E-07 60.1 3.9 34 2-35 143-176 (562)
46 PTZ00302 N-acetylglucosamine-p 94.7 0.025 5.3E-07 60.3 3.4 34 1-34 167-201 (585)
47 PF11576 DUF3236: Protein of u 64.2 12 0.00026 32.0 4.3 82 137-224 37-123 (154)
48 TIGR02133 RPI_actino ribose 5- 62.6 99 0.0021 26.9 9.9 67 137-210 2-70 (148)
49 PRK08621 galactose-6-phosphate 61.5 27 0.00059 30.1 6.1 63 137-209 2-66 (142)
50 TIGR01118 lacA galactose-6-pho 59.8 34 0.00073 29.5 6.4 63 137-209 2-66 (141)
51 PRK05571 ribose-5-phosphate is 54.8 49 0.0011 28.8 6.7 66 137-209 2-69 (148)
52 PRK08622 galactose-6-phosphate 54.4 54 0.0012 29.2 7.0 102 137-268 2-105 (171)
53 PRK12615 galactose-6-phosphate 53.8 56 0.0012 29.1 7.0 65 137-209 2-68 (171)
54 PRK12613 galactose-6-phosphate 50.5 55 0.0012 28.2 6.2 62 137-209 2-65 (141)
55 PRK13396 3-deoxy-7-phosphohept 50.2 27 0.00059 35.0 5.0 61 134-196 270-336 (352)
56 TIGR01120 rpiB ribose 5-phosph 50.1 60 0.0013 28.1 6.4 65 137-209 1-67 (143)
57 TIGR01119 lacB galactose-6-pho 49.9 68 0.0015 28.6 6.9 102 137-268 2-105 (171)
58 PRK08673 3-deoxy-7-phosphohept 48.9 36 0.00079 33.9 5.6 61 134-196 261-327 (335)
59 PTZ00215 ribose 5-phosphate is 48.7 81 0.0018 27.5 7.1 66 136-209 3-72 (151)
60 PRK12613 galactose-6-phosphate 48.4 29 0.00062 29.9 4.2 24 2-25 14-37 (141)
61 PF04028 DUF374: Domain of unk 48.1 1.1E+02 0.0024 23.1 6.9 59 134-207 10-68 (74)
62 PF12909 DUF3832: Protein of u 47.7 26 0.00056 27.6 3.5 48 403-458 13-61 (89)
63 PRK13398 3-deoxy-7-phosphohept 46.4 42 0.00092 32.3 5.5 61 134-196 195-261 (266)
64 PF02502 LacAB_rpiB: Ribose/Ga 42.8 36 0.00079 29.3 4.0 65 137-209 1-67 (140)
65 PF09981 DUF2218: Uncharacteri 42.2 1.7E+02 0.0036 23.0 7.8 69 373-447 10-79 (89)
66 TIGR01123 ilvE_II branched-cha 42.1 1.1E+02 0.0025 29.9 8.1 73 191-279 167-248 (313)
67 PRK05571 ribose-5-phosphate is 40.9 45 0.00097 29.0 4.3 21 2-22 14-34 (148)
68 cd02072 Glm_B12_BD B12 binding 39.5 32 0.00069 29.1 3.1 26 3-28 16-41 (128)
69 TIGR00689 rpiB_lacA_lacB sugar 37.6 53 0.0012 28.4 4.2 21 2-22 12-32 (144)
70 PRK08868 flagellar protein Fla 36.6 1.3E+02 0.0028 26.0 6.3 51 184-234 74-130 (144)
71 TIGR00689 rpiB_lacA_lacB sugar 36.1 1.1E+02 0.0023 26.5 5.9 53 148-209 13-66 (144)
72 TIGR01501 MthylAspMutase methy 35.8 39 0.00085 28.8 3.1 26 3-28 18-43 (134)
73 TIGR01120 rpiB ribose 5-phosph 35.8 62 0.0013 28.0 4.3 21 2-22 13-33 (143)
74 TIGR01119 lacB galactose-6-pho 34.2 66 0.0014 28.7 4.3 21 2-22 14-34 (171)
75 PRK01964 4-oxalocrotonate taut 33.6 69 0.0015 23.1 3.8 33 418-450 2-35 (64)
76 PTZ00215 ribose 5-phosphate is 33.4 68 0.0015 28.0 4.3 21 2-22 16-38 (151)
77 cd00491 4Oxalocrotonate_Tautom 33.3 63 0.0014 22.5 3.5 31 418-448 1-32 (58)
78 COG0860 AmiC N-acetylmuramoyl- 33.2 1.1E+02 0.0025 28.7 6.1 64 133-209 40-122 (231)
79 PRK08621 galactose-6-phosphate 33.2 87 0.0019 27.0 4.8 21 2-22 14-34 (142)
80 TIGR01118 lacA galactose-6-pho 32.9 69 0.0015 27.6 4.1 21 2-22 14-34 (141)
81 PF05991 NYN_YacP: YacP-like N 32.8 1.7E+02 0.0037 25.9 6.8 23 187-209 32-54 (166)
82 COG1979 Uncharacterized oxidor 32.1 1.2E+02 0.0025 30.2 5.9 62 136-207 30-94 (384)
83 PHA00689 hypothetical protein 31.7 35 0.00076 23.4 1.7 15 398-412 26-41 (62)
84 PF14028 SpaB_C: SpaB C-termin 31.5 63 0.0014 31.0 4.3 25 406-430 37-61 (283)
85 COG2876 AroA 3-deoxy-D-arabino 31.2 1.2E+02 0.0026 29.1 5.7 63 132-195 211-278 (286)
86 COG2185 Sbm Methylmalonyl-CoA 30.4 49 0.0011 28.6 2.8 25 4-28 30-54 (143)
87 PF01133 ER: Enhancer of rudim 30.2 2.1E+02 0.0047 23.1 6.2 52 408-460 5-63 (102)
88 PF15079 DUF4546: Domain of un 30.0 51 0.0011 28.9 2.8 17 443-459 73-89 (205)
89 COG0698 RpiB Ribose 5-phosphat 29.8 3.8E+02 0.0082 23.4 11.3 64 137-209 2-69 (151)
90 PRK00745 4-oxalocrotonate taut 29.6 83 0.0018 22.3 3.6 32 418-449 2-34 (62)
91 PRK13397 3-deoxy-7-phosphohept 29.0 1.2E+02 0.0026 28.9 5.4 56 134-191 183-244 (250)
92 TIGR01361 DAHP_synth_Bsub phos 28.4 1.4E+02 0.0031 28.6 5.9 60 134-195 193-258 (260)
93 PLN02204 diacylglycerol kinase 28.1 3.4E+02 0.0075 29.4 9.2 83 110-209 140-229 (601)
94 PF03668 ATP_bind_2: P-loop AT 28.0 1.5E+02 0.0033 28.7 6.0 26 138-163 4-29 (284)
95 PF09413 DUF2007: Domain of un 28.0 51 0.0011 24.0 2.2 27 414-440 40-66 (67)
96 PRK14752 delta-hemolysin; Prov 27.8 34 0.00074 22.0 1.0 29 432-460 16-44 (44)
97 PRK08622 galactose-6-phosphate 27.4 97 0.0021 27.6 4.2 22 2-23 14-35 (171)
98 PF02502 LacAB_rpiB: Ribose/Ga 27.3 78 0.0017 27.3 3.5 49 2-52 13-66 (140)
99 PRK12615 galactose-6-phosphate 26.8 1E+02 0.0022 27.6 4.2 21 2-22 14-34 (171)
100 TIGR02133 RPI_actino ribose 5- 26.6 1E+02 0.0022 26.9 4.1 21 2-22 14-34 (148)
101 PRK08452 flagellar protein Fla 25.5 2.8E+02 0.0062 23.3 6.5 50 185-234 57-112 (124)
102 PF14492 EFG_II: Elongation Fa 25.1 1.3E+02 0.0028 22.6 4.1 33 417-449 3-35 (75)
103 COG0113 HemB Delta-aminolevuli 24.9 6E+02 0.013 25.0 9.2 108 136-247 45-169 (330)
104 PRK02220 4-oxalocrotonate taut 24.6 1.1E+02 0.0024 21.5 3.5 32 418-449 2-34 (61)
105 PRK05198 2-dehydro-3-deoxyphos 24.4 2.4E+02 0.0052 27.0 6.5 61 134-195 182-258 (264)
106 PRK12457 2-dehydro-3-deoxyphos 24.3 2.5E+02 0.0055 27.1 6.7 60 134-194 190-265 (281)
107 COG4019 Uncharacterized protei 24.2 4.4E+02 0.0095 22.2 7.6 82 137-224 38-124 (156)
108 PF06029 AlkA_N: AlkA N-termin 24.1 1.1E+02 0.0025 25.2 3.9 41 406-450 45-85 (116)
109 PLN02958 diacylglycerol kinase 24.0 3.7E+02 0.008 28.3 8.6 50 109-163 92-147 (481)
110 cd06395 PB1_Map2k5 PB1 domain 23.9 88 0.0019 24.0 2.8 44 185-235 27-70 (91)
111 smart00135 LY Low-density lipo 23.9 63 0.0014 20.4 1.9 18 201-218 12-29 (43)
112 TIGR01006 polys_exp_MPA1 polys 23.4 1.6E+02 0.0035 27.2 5.3 37 408-444 109-145 (226)
113 PRK07738 flagellar protein Fla 23.1 3.4E+02 0.0073 22.6 6.4 50 185-234 50-105 (117)
114 PRK00103 rRNA large subunit me 22.8 4E+02 0.0086 23.4 7.2 29 207-235 65-93 (157)
115 TIGR02883 spore_cwlD N-acetylm 22.8 3.1E+02 0.0068 24.6 6.9 71 137-209 2-94 (189)
116 PRK02289 4-oxalocrotonate taut 22.8 1.2E+02 0.0027 21.5 3.4 31 418-448 2-33 (60)
117 TIGR00640 acid_CoA_mut_C methy 22.6 88 0.0019 26.5 3.0 25 3-27 19-43 (132)
118 TIGR01362 KDO8P_synth 3-deoxy- 22.6 2.7E+02 0.0059 26.6 6.5 60 135-195 175-250 (258)
119 COG0124 HisS Histidyl-tRNA syn 22.5 20 0.00043 37.0 -1.2 23 405-427 73-95 (429)
120 PLN03033 2-dehydro-3-deoxyphos 21.6 2.5E+02 0.0055 27.2 6.1 60 134-194 188-268 (290)
121 COG0075 Serine-pyruvate aminot 21.3 5.8E+02 0.013 26.0 9.0 104 137-268 82-188 (383)
122 KOG3852 Uncharacterized conser 21.2 4.8E+02 0.011 25.6 7.8 93 6-123 87-179 (426)
123 COG1660 Predicted P-loop-conta 20.7 2.3E+02 0.005 27.2 5.5 25 138-162 4-28 (286)
124 PF03646 FlaG: FlaG protein; 20.7 2.2E+02 0.0048 22.9 4.9 51 184-234 40-96 (107)
No 1
>PLN02371 phosphoglucosamine mutase family protein
Probab=100.00 E-value=4.7e-85 Score=689.70 Aligned_cols=442 Identities=70% Similarity=1.017 Sum_probs=369.4
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie 80 (461)
||++++++||+++|++|+++|.+|||+++|++... +++++|||||||||||++||||||++++|.++.+++++++|
T Consensus 130 ~l~~a~a~gL~s~Gi~V~~~g~~pTP~~~~av~~~----~~~~~gGImITASHNP~~~NGiK~~~~~G~~~~~~~~~~ie 205 (583)
T PLN02371 130 RLADAVFAGLASAGLDVVDMGLATTPAMFMSTLTE----REDYDAPIMITASHLPYNRNGLKFFTKDGGLGKPDIKDILE 205 (583)
T ss_pred HHHHHHHHHHHHCCCEEEEecccCchHHHHHHHhc----cCCCceEEEEeCCCCCCCCCCEEEeCCCCCCCchHHHHHHH
Confidence 68999999999999999999999999999998732 23689999999999999999999999999998888888887
Q ss_pred HHHhHHhhhhhcccccccccCCCcEEEEcchHHHHHHHHHHHHhhcC---CCCCCCCCcEEEEeCCCCCchHHHHHHHhh
Q 012560 81 RAADIYKQFMVEGLTNLEKQTSTSIKRVDYMSVYTSDLVKAVRRAAG---DIEKPLEGFHIVVDAGNGAGGFFAAKVLEP 157 (461)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~Y~~~l~~~i~~~~~---~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~ 157 (461)
+......++.+..+........+.+...++.+.|++++.+.++...+ ....+++++|||+||+||+++.+++.+|++
T Consensus 206 ~~~~~~~e~~~~~~~~~~~~~~g~i~~~d~~~~Y~~~l~~~i~~~~~~~~~~~~~~~~lkIvvD~~nGag~~~~~~lL~~ 285 (583)
T PLN02371 206 RAARIYKEWSDEGLLKSSSGASSVVCRVDFMSTYAKHLRDAIKEGVGHPTNYETPLEGFKIVVDAGNGAGGFFAEKVLEP 285 (583)
T ss_pred HHHhhcccccccccchhhhccCCcEEEechHHHHHHHHHHHHHHhhccccccccCCCCCEEEEeCCCCchHHHHHHHHHH
Confidence 65432111211110000001235566668899999999998874332 011235789999999999999999999999
Q ss_pred cCCCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHH
Q 012560 158 LGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLE 237 (461)
Q Consensus 158 lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~~l~ 237 (461)
|||+++..++++|||.||++.|+|+.+++++.+.+.|++.++|+|+++||||||++++|++|++|++|++++|+++++++
T Consensus 286 LG~~v~~~~~~~pDg~Fp~~~P~P~~~~~l~~l~~~v~~~~aDlGia~DgDaDR~~vvD~~G~~i~gd~l~aLla~~ll~ 365 (583)
T PLN02371 286 LGADTSGSLFLEPDGMFPNHIPNPEDKAAMSATTQAVLANKADLGIIFDTDVDRSAVVDSSGREINRNRLIALMSAIVLE 365 (583)
T ss_pred cCCCeEeeccCCCCCCCCCcCCCCCCHHHHHHHHHHHHhcCCCEEEEECCCccceeEECCCCEEECHHHHHHHHHHHHHH
Confidence 99998734789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecCCccCCcHHHHHHH
Q 012560 238 EHPGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVK 317 (461)
Q Consensus 238 ~~~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ 317 (461)
.+++..||++.+||. +++.+++++|+++++|||||+||+++|.+.+..|++++||||+|||++|+++++.+||++++++
T Consensus 366 ~~~g~~VV~~v~sS~-~l~~ia~~~G~~v~rt~vG~k~v~~~m~~~~~~~~~~~~ggEeSG~~~~~~~~~~dDg~~a~~~ 444 (583)
T PLN02371 366 EHPGTTIVTDSVTSD-GLTTFIEKKGGKHHRFKRGYKNVIDKGVRLNSDGEETHLMIETSGHGALKENHFLDDGAYLAVK 444 (583)
T ss_pred hCCCCEEEEecccch-hHHHHHHHcCCeEEEecCchHHHHHHHHHhhccCCceEEEEcccCeEEECCCCCCCcHHHHHHH
Confidence 877767776665555 6677889999999999999999999999877666678999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcccHHHHHhhccCCCccceeeeeecccCC---cccCCccchhhH-HHHHHHHhhhcCCCCCCCC
Q 012560 318 LLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHS---DLKGGSFRDYGE-AVLKHLENRVDSDPKLQKA 393 (461)
Q Consensus 318 ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~v~~~l~~~~~~~~~~~~~ 393 (461)
+|++|+.++.+.+. ++|+++++++|+++.+.+++.++. |+ | +.++ ++|++|.+...+..++...
T Consensus 445 ile~la~~~~~~~~---~~Lsel~~~lp~~~~~~~~r~~v~--~~~~~~-------~~kg~~v~~~l~~~~~~~~~~~~~ 512 (583)
T PLN02371 445 IIIELVRMRAAGAG---GGLGDLIEDLEEPLEAVELRLKIL--DEGKDF-------KAYGEEVLEHLRNSIESDGKLEGA 512 (583)
T ss_pred HHHHHHHHHhccCC---CCHHHHHHhchhccCCceeeecCC--ccchhH-------HHHHHHHHHHHHhhhhcccccccC
Confidence 99999986533111 459999999998766666666665 65 5 2234 7999997653322333345
Q ss_pred CcccCceEEE----ecCeEEEEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcCCCCCchHHHHHHh
Q 012560 394 PVNYEGVRVS----GSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFPALDTSALDKFVQ 459 (461)
Q Consensus 394 ~~~~dGlki~----~~~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v~~~~~~~~~~~~~~~~ 459 (461)
++.+||+|++ +++||+|||||+|||+||||+||.+++.++++++.+.++|++|-+||+|+|+||++
T Consensus 513 ~~~~DGvkv~~~~~~~~gWvLiRpS~TEP~iri~~Ea~s~e~a~~l~~~~~~~v~~~~~~~~~~~~~~~~ 582 (583)
T PLN02371 513 PVNYEGVRVSDEGEGFGGWFLLRQSLHDPVIPLNIESSSPGGAQKMALVVLTWLKEFAALDASALDKFLD 582 (583)
T ss_pred ccccceEEEEecccCCCceEEEEeCCCCceEEEEEeECCHHHHHHHHHHHHHHHhhhchhhHHHHHHhhc
Confidence 6779999999 78899999999999999999999999999999999999999999999999999987
No 2
>cd03089 PMM_PGM The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e.g. between mannose-1-phosphate and mannose-6-phosphate or glucose-1-phosphate and glucose-6-phosphate) via a bisphosphorylated sugar intermediate. The reaction involves two phosphoryl transfers, with an intervening 180 degree reorientation of the reaction intermediate during catalysis. Reorientation of the intermediate occurs without dissociation from the active site of the enzyme and is thus, a simple example of processivity, as defined by multiple rounds of catalysis without release of substrate. Glucose-6-phosphate and glucose-1-phosphate are known to be utilized for energy metabolism and cell surface construction, respectively. PMM/PGM belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other membe
Probab=100.00 E-value=2.5e-81 Score=646.38 Aligned_cols=392 Identities=34% Similarity=0.491 Sum_probs=335.8
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie 80 (461)
||++++++||+++|++|+++|.+|||+++|++. +++++|||||||||||++||||||+++ |+++.++.++.++
T Consensus 51 ~~~~a~~~gL~s~G~~V~~~g~~pTP~~~~~v~------~~~a~gGI~ITASHNP~~~nGiK~~~~-G~~~~~~~~~~Ie 123 (443)
T cd03089 51 ELAAALIEGLLAAGCDVIDIGLVPTPVLYFATF------HLDADGGVMITASHNPPEYNGFKIVIG-GGPLSGEDIQALR 123 (443)
T ss_pred HHHHHHHHHHHHcCCcEEEeCCcchHHHHHHHh------ccCCCeEEEEecCCCCcccCceEeccC-CCCCCHHHHHHHH
Confidence 689999999999999999999999999999997 568999999999999999999999999 8877666566565
Q ss_pred HHHhHHhhhhhcccccccccCCCcEEEEcchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcCC
Q 012560 81 RAADIYKQFMVEGLTNLEKQTSTSIKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLGA 160 (461)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~lg~ 160 (461)
+... +++++. ....+.+...+..+.|++.+.+.++. ..+++|||+||+||+++.+++++|++|||
T Consensus 124 ~~~~------~~~~~~--~~~~g~~~~~d~~~~Y~~~l~~~i~~-------~~~~lkVvvd~~~G~~~~~~~~ll~~lG~ 188 (443)
T cd03089 124 ERAE------KGDFAA--ATGRGSVEKVDILPDYIDRLLSDIKL-------GKRPLKVVVDAGNGAAGPIAPQLLEALGC 188 (443)
T ss_pred HHHH------hccccc--cCCCCcEEECCCHHHHHHHHHHhccc-------ccCCCeEEEECCCCchHHHHHHHHHHCCC
Confidence 5322 111110 12345666668899999999888742 12689999999999999999999999999
Q ss_pred CcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhCC
Q 012560 161 KTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEHP 240 (461)
Q Consensus 161 ~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~~l~~~~ 240 (461)
+++ .+|+.|||.||++.|+|+.+++++.+.+.|++.++|+|+++||||||++++|++|+++++|++++|+++++++..+
T Consensus 189 ~v~-~i~~~~d~~F~~~~p~p~~~~~l~~l~~~v~~~~adlgia~D~DaDR~~ivd~~G~~l~~d~~~~lla~~ll~~~~ 267 (443)
T cd03089 189 EVI-PLFCEPDGTFPNHHPDPTDPENLEDLIAAVKENGADLGIAFDGDGDRLGVVDEKGEIIWGDRLLALFARDILKRNP 267 (443)
T ss_pred EEE-EecCCCCCCCCCCCcCCCCHHHHHHHHHHHHHcCCCEEEEecCCcceeEEECCCCcEeCHHHHHHHHHHHHHHHCC
Confidence 998 5899999999999999998899999999999999999999999999999999999999999999999999998766
Q ss_pred CCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecC-CccCCcHHHHHHHHH
Q 012560 241 GTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKE-NHWLDDGAYLMVKLL 319 (461)
Q Consensus 241 ~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~-~~~~~Dgi~aa~~ll 319 (461)
++.||.++.||. +++.+++++|++++||||||||++++|.+.+ ++||+|+|||+++++ +.+.+||++++++++
T Consensus 268 ~~~vv~~v~ss~-~~~~ia~~~g~~v~~t~vG~k~v~~~m~~~~-----~~~ggE~sgg~~~~~~~~~~~Dgi~a~l~il 341 (443)
T cd03089 268 GATIVYDVKCSR-NLYDFIEEAGGKPIMWKTGHSFIKAKMKETG-----ALLAGEMSGHIFFKDRWYGFDDGIYAALRLL 341 (443)
T ss_pred CCeEEEecccch-HHHHHHHHcCCeEEEecCcHHHHHHHHHHhC-----CcEEEeccceEEEcCCcCCCccHHHHHHHHH
Confidence 656776665555 7788899999999999999999999999865 469999999999999 999999999999999
Q ss_pred HHHHHHHHcCCCCCcccHHHHHhhccCCCccceeeeeecccCCcccCCccchhhHHHHHHHHhhhcCCCCCCCCCcccCc
Q 012560 320 NKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYEG 399 (461)
Q Consensus 320 ~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~dG 399 (461)
++|+.. + ++|+++++++|+++...+ +++. |+| +.++++|++|.+..... ...++++||
T Consensus 342 e~la~~----~----~~Lsel~~~~p~~~~~~~--~~~~--~~~-------~~k~~~~~~l~~~~~~~---~~~~~~~DG 399 (443)
T cd03089 342 ELLSKS----G----KTLSELLADLPKYFSTPE--IRIP--VTE-------EDKFAVIERLKEHFEFP---GAEIIDIDG 399 (443)
T ss_pred HHHHhc----C----CCHHHHHHhccccCCCCc--eecc--CCc-------hhHHHHHHHHHHHhccc---cCCeeeecC
Confidence 988764 2 459999999999654433 3344 887 45789999998754211 114778999
Q ss_pred eEEEecCeEEEEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHh
Q 012560 400 VRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAAT 443 (461)
Q Consensus 400 lki~~~~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v 443 (461)
+|+++++||+|||||||||++|||+||.|++.++++++++.+.+
T Consensus 400 iki~~~~~WvliRpSgtEP~iriy~Ea~~~~~a~~l~~~~~~~~ 443 (443)
T cd03089 400 VRVDFEDGWGLVRASNTEPVLVLRFEADTEEGLEEIKAELRKLL 443 (443)
T ss_pred EEEEECCeeEEEeecCCCCEEEEEEEeCCHHHHHHHHHHHHhhC
Confidence 99998899999999999999999999999999999999887753
No 3
>PRK14321 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=9e-80 Score=634.59 Aligned_cols=397 Identities=24% Similarity=0.349 Sum_probs=336.7
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie 80 (461)
||++++++||+++|++|+++|.+|||+++|++. ++++.|||||||||||++||||||++++|.++.++.++.++
T Consensus 51 ~l~~a~~~gL~s~G~~V~~~g~~pTP~~~~av~------~~~~~gGI~ITaSHnP~~~nGiK~~~~~G~~i~~~~~~~ie 124 (449)
T PRK14321 51 MLKNALISGLLSTGVDVIDIGLAPTPLTGFAIK------LYNADAGVTITASHNPPEYNGIKVWQRNGMAYTPEMENELE 124 (449)
T ss_pred HHHHHHHHHHHHCCCeEEEeCCcCCcHHHHHHH------hcCCCeEEEEEeCCCCHHHCcEEEECCCCCcCCHHHHHHHH
Confidence 689999999999999999999999999999997 56889999999999999999999999999998887777776
Q ss_pred HHHhHHhhhhhcccccccccCCCcEEEEcchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcCC
Q 012560 81 RAADIYKQFMVEGLTNLEKQTSTSIKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLGA 160 (461)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~lg~ 160 (461)
+... .++++.......+.+...++.+.|++.+.+.++. .+++|||+||+||+++.+++++|++|||
T Consensus 125 ~~~~------~~~~~~~~~~~~g~~~~~~~~~~Y~~~l~~~~~~--------~~~~kVvvD~~~G~~~~~~~~il~~lg~ 190 (449)
T PRK14321 125 RIIE------SGNFKRVPWNEIGTLRRADPKEEYIKAALEMIKL--------ENSYTVVVDSGNGAGSILSPYLQRELGN 190 (449)
T ss_pred HHHh------cccccccccccCceeeecccHHHHHHHHHHhcCc--------CCCCEEEEECCCchHHHHHHHHHHHcCC
Confidence 6432 1111100011224555557889999999888742 2689999999999999999999999999
Q ss_pred CcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhCC
Q 012560 161 KTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEHP 240 (461)
Q Consensus 161 ~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~~l~~~~ 240 (461)
+++ .+|+.|||.|| +.|+|. +++++.+.+.|++.++|+|+++||||||++++|++|+++++|++++|+++++++.++
T Consensus 191 ~v~-~i~~~~d~~f~-~~p~p~-~~~l~~l~~~v~~~~adlGia~DgD~DR~~vvd~~G~~~~~d~~~~l~a~~ll~~~~ 267 (449)
T PRK14321 191 KVI-SLNSHPSGFFV-RELEPN-AKSLSMLAKTVKVLKADVGIAHDGDADRIGVVDDQGNFVEYEVMLSLIAGYMLRKFG 267 (449)
T ss_pred EEE-EeCccCCCCCC-CCCCCc-hhhHHHHHHHHHHCCCCEEEEecCCCceEEEECCCCCEeChHHHHHHHHHHHHHhCC
Confidence 998 58999999998 478887 788999999999999999999999999999999999999999999999999998765
Q ss_pred CCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecCCccCCcHHHHHHHHHH
Q 012560 241 GTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVKLLN 320 (461)
Q Consensus 241 ~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ll~ 320 (461)
...||.+..| +.+++.+++++|+++++|||||+|++++|.+.+ .+||||+|||++|+++++.+||+++++++|+
T Consensus 268 ~~~vV~~v~s-s~~i~~~a~~~g~~v~~t~vG~~~i~~~m~~~~-----~~~ggE~sGg~~~~~~~~~~Dgi~a~~~ile 341 (449)
T PRK14321 268 KGKIVTTVDA-GFALDDYIRPLGGEVIRTRVGDVAVAEELAKHG-----GVFGGEPSGTWIIPQWNLTPDGIFAGALVLE 341 (449)
T ss_pred CCcEEEeccc-cHHHHHHHHHcCCEEEEEecChHHHHHHHHhhC-----CEEEecCCCCEEeCCcCCCCCHHHHHHHHHH
Confidence 5567765555 557788999999999999999999999998765 4799999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcccHHHHHhhccCCCccceeeeeecccCCcccCCccchhhHHHHHHHHhhhcCCCCCCCCCcccCce
Q 012560 321 KLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYEGV 400 (461)
Q Consensus 321 ~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~dGl 400 (461)
+|+... +|+++++++|.++.. +..++ |+| +.|+++|+++.+...+.. ...+++++||+
T Consensus 342 ~la~~~---------~Ls~l~~~~~~~~~~---~~~v~--~~~-------~~k~~~~~~l~~~~~~~~-~~~~v~~~DGv 399 (449)
T PRK14321 342 MIDRLG---------PISELAKEVPRYVTL---RAKIP--CPN-------EKKAKAMEIIAKEALKNF-DYERLIDIDGI 399 (449)
T ss_pred HHHcCC---------CHHHHHHhccccccc---ccccc--Cch-------hhHHHHHHHHHHHhhhhc-ccCceeecceE
Confidence 987642 299999999986532 23455 887 457889998865432100 01257889999
Q ss_pred EEEecCeEEEEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcCCC
Q 012560 401 RVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFPA 448 (461)
Q Consensus 401 ki~~~~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v~~~~~ 448 (461)
|+.+++||+|||||||||++|||+||.|++.++++++.+.++|+++++
T Consensus 400 kv~~~~~WvliRpS~TeP~~riy~Ea~s~e~~~~l~~~~~~~i~~~~~ 447 (449)
T PRK14321 400 RIENDDWWILFRPSGTEPIMRITLEAHTEEKAEELMEKAEKLVKEAIK 447 (449)
T ss_pred EEecCCcEEEEecCCCCceEEEEEecCCHHHHHHHHHHHHHHHHHHhh
Confidence 999888999999999999999999999999999999999999998754
No 4
>PRK09542 manB phosphomannomutase/phosphoglucomutase; Reviewed
Probab=100.00 E-value=1.2e-78 Score=625.57 Aligned_cols=392 Identities=27% Similarity=0.367 Sum_probs=327.3
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHH--HHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPD--IKDI 78 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~--~~~~ 78 (461)
||++|+++||+++|++|+++|.+|||+++|++. +++| +||||||||||++|||+|++.+.|.+++++ ++++
T Consensus 50 ~l~~a~~~gL~s~G~~V~~lg~~pTP~~~~av~------~~~~-~Gi~iTaSHNP~~~nG~Ki~~~~~~~~~~~~~i~~i 122 (445)
T PRK09542 50 ELAAAFAEGVTAQGLDVVRIGLASTDQLYFASG------LLDC-PGAMFTASHNPAAYNGIKLCRAGAKPVGQDTGLAAI 122 (445)
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCCCHHHHheec------ccCC-CEEEEcCCCCCCccCcEEEecCCCcccCchhHHHHH
Confidence 689999999999999999999999999999987 4577 699999999999999999998877766654 2333
Q ss_pred HHHHHhHHhhhhhcccccccccCCCcEEEEcchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhc
Q 012560 79 LERAADIYKQFMVEGLTNLEKQTSTSIKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPL 158 (461)
Q Consensus 79 ie~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~l 158 (461)
.+...+ .... . ....+.+...+..+.|++++.+.++.+ ..+++|||+||+||+++.+++++|++|
T Consensus 123 ~~~~~~---~~~~-----~-~~~~g~~~~~~~~~~Y~~~l~~~i~~~------~i~~lkVvvd~~~Ga~~~~~~~ll~~l 187 (445)
T PRK09542 123 RDDLIA---GVPA-----Y-DGPPGTVTERDVLADYAAFLRSLVDLS------GIRPLKVAVDAGNGMGGHTVPAVLGGL 187 (445)
T ss_pred HHHHhc---cccc-----c-cCCCCceeccChHHHHHHHHHHhcccc------cCCCCEEEEECCCCchhHHHHHHHHhC
Confidence 221111 0000 0 112355555578999999999887532 126899999999999999999999999
Q ss_pred CCCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHh
Q 012560 159 GAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEE 238 (461)
Q Consensus 159 g~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~~l~~ 238 (461)
||+++ .+|+.+||.||++.|+|+.+++|+.+.+.|++.++|+|+++||||||++++|++|+++++|++++|+++++++.
T Consensus 188 g~~vv-~~~~~~d~~Fp~~~p~P~~~~~l~~l~~~v~~~~adlGia~DgD~DR~~ivd~~G~~l~~d~~~~l~~~~~l~~ 266 (445)
T PRK09542 188 PITLL-PLYFELDGTFPNHEANPLDPANLVDLQAFVRETGADIGLAFDGDADRCFVVDERGQPVSPSAVTALVAARELAR 266 (445)
T ss_pred CCEEE-EEecCcCCCCCCCCcCCCCHHHHHHHHHHHHHcCCCEEEEECCCCceEEEECCCCCCccHHHHHHHHHHHHHHH
Confidence 99998 58999999999999999988999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecCCccCCcHHHHHHHH
Q 012560 239 HPGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVKL 318 (461)
Q Consensus 239 ~~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~l 318 (461)
+++..||.+..||. +++.+++++|+++++|||||+|++++|.+.+ ++||||+|||++|+++++.+||+++++++
T Consensus 267 ~~~~~vv~~v~ss~-~~~~~a~~~g~~~~~t~vG~~~i~~~m~~~~-----~~~ggE~sgg~~f~~~~~~~Dgi~a~~~l 340 (445)
T PRK09542 267 EPGATIIHNLITSR-AVPELVAERGGTPVRTRVGHSFIKALMAETG-----AIFGGEHSAHYYFRDFWGADSGMLAALHV 340 (445)
T ss_pred CCCCeEEEeeccch-hHHHHHHHcCCeEEEecCcHHHHHHHHHHhC-----CcEEEeeeccEEecCcCCCCcHHHHHHHH
Confidence 76666776665555 6688999999999999999999999998765 46999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHhhccCCCccceeeeeecccCCcccCCccchhhHHHHHHHHhhhcCCCCCCCCCcccC
Q 012560 319 LNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYE 398 (461)
Q Consensus 319 l~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~d 398 (461)
+++|+... ++|+++++++|+++.+.++. |+| ..++++|+++.+.+.. ....++++|
T Consensus 341 le~l~~~~--------~~l~~l~~~~~~~~~~~~~~------~~~-------~~~~~~~~~l~~~~~~---~~~~~~~~D 396 (445)
T PRK09542 341 LAALGEQD--------RPLSELMADYQRYAASGEIN------STV-------ADAPARMEAVLKAFAD---RIVSVDHLD 396 (445)
T ss_pred HHHHHhcC--------CCHHHHHHhhhhcCccccee------ecC-------CCHHHHHHHHHHHhhh---ccCCceecc
Confidence 99887542 45999999998865433332 665 2256688998765421 112467789
Q ss_pred ceEEEe-cCeEEEEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhc
Q 012560 399 GVRVSG-SGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKE 445 (461)
Q Consensus 399 Glki~~-~~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v~~ 445 (461)
|+|+++ +++|+|||||||||++|||+||.|++.++++++.+.++|+.
T Consensus 397 Gvki~~~dg~WvliRpSgTEP~lriy~Ea~~~e~~~~l~~~~~~~v~~ 444 (445)
T PRK09542 397 GVTVDLGDGSWFNLRASNTEPLLRLNVEARTEEEVDALVDEVLAIIRA 444 (445)
T ss_pred eEEEEecCCcEEEEEecCCCcEEEEEEEeCCHHHHHHHHHHHHHHhhc
Confidence 999998 56799999999999999999999999999999999998863
No 5
>cd05803 PGM_like4 This PGM-like (phosphoglucomutase-like) domain is located C-terminal to a mannose-1-phosphate guanyltransferase domain in a protein of unknown function that is found in both prokaryotes and eukaryotes. This domain belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=100.00 E-value=1e-78 Score=626.89 Aligned_cols=391 Identities=27% Similarity=0.388 Sum_probs=327.8
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie 80 (461)
||++++++||+++|++|+++|.+|||+++|++. ++++++||||||||||++||||||++++|.++.++.++.++
T Consensus 52 ~l~~a~~~gL~~~G~~V~~~g~~pTP~~~~a~~------~~~~~~GI~ITaShnp~~~nGiK~~~~~G~~~~~~~~~~i~ 125 (445)
T cd05803 52 MLEKIVIGALLACGCDVIDLGIAPTPTVQVLVR------QSQASGGIIITASHNPPQWNGLKFIGPDGEFLTPDEGEEVL 125 (445)
T ss_pred HHHHHHHHHHHHCCCeEEEeCCCCchHHHHHHH------HhCCCeeEEEEecCCCcccccEEEECCCCCcCCHHHHHHHH
Confidence 689999999999999999999999999999997 67899999999999999999999999999988777665555
Q ss_pred HHHhHHhhhhhcccccccccCCCcEEEE-cchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012560 81 RAADIYKQFMVEGLTNLEKQTSTSIKRV-DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (461)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~lg 159 (461)
.... .++++.......+.+... +..+.|++.+.+.++.+.+ .++.+++|||+||+||+++.+++++|++||
T Consensus 126 ~~~~------~~~~~~~~~~~~g~~~~~~~~~~~Y~~~l~~~~~~~~~--~~~~~~lkVvvd~~~G~~~~~~~~ll~~lg 197 (445)
T cd05803 126 SCAE------AGSAQKAGYDQLGEVTFSEDAIAEHIDKVLALVDVDVI--KIRERNFKVAVDSVNGAGGLLIPRLLEKLG 197 (445)
T ss_pred HHHh------cccccccccccCcceeccCchHHHHHHHHHhhcccchh--hhccCCCEEEEECCCCcHHHHHHHHHHHcC
Confidence 4321 111110001122444433 6788899999888753321 112568999999999999999999999999
Q ss_pred CCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHh-
Q 012560 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEE- 238 (461)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~~l~~- 238 (461)
|+++ .+|+.|||.|| +.|+|. +++++.+.+.|++.++|+|+++||||||++++|++|+++++|++++|+++++++.
T Consensus 198 ~~v~-~~~~~~d~~F~-~~p~p~-~~~l~~l~~~v~~~~adlgi~~D~DgDR~~ivd~~G~~i~~d~~~al~a~~ll~~~ 274 (445)
T cd05803 198 CEVI-VLNCEPTGLFP-HTPEPL-PENLTQLCAAVKESGADVGFAVDPDADRLALVDEDGRPIGEEYTLALAVDYVLKYG 274 (445)
T ss_pred CEEE-EeCCcCCCCCC-CCCCCC-hHHHHHHHHHHHhcCCCEEEeeCCCCceEEEECCCCCCcChHHHHHHHHHHHHHhc
Confidence 9987 58999999998 788888 7889999999999999999999999999999999999999999999999999984
Q ss_pred CCCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecCCccCCcHHHHHHHH
Q 012560 239 HPGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVKL 318 (461)
Q Consensus 239 ~~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~l 318 (461)
..+..||.+ ++|+.+++.+++++|+++++|||||+|++++|.+.+ ++||+|+|||++|+++++.+||+++++++
T Consensus 275 ~~~~~vv~~-v~ss~~i~~ia~~~g~~v~~t~vG~~~i~~~~~~~~-----~~~g~E~sg~~~~~~~~~~~Dgi~a~l~~ 348 (445)
T cd05803 275 GRKGPVVVN-LSTSRALEDIARKHGVPVFRSAVGEANVVEKMKEVD-----AVIGGEGNGGVILPDVHYGRDSLVGIALV 348 (445)
T ss_pred CCCCCEEEe-ccchHHHHHHHHHcCCEEEEecccHHHHHHHHHhcC-----CeEEEeccCCeecCCccccccHHHHHHHH
Confidence 223357755 555568889999999999999999999999998765 47999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHhhccCCCccceeeeeecccCCcccCCccchhhHHHHHHHHhhhcCCCCCCCCCcccC
Q 012560 319 LNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYE 398 (461)
Q Consensus 319 l~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~d 398 (461)
|++|+... ++|+++++++|.++.. +.+++ |+| +.++++|++|.+.... .+++.+|
T Consensus 349 le~la~~~--------~~L~~l~~~~~~~~~~---~~~v~--~~~-------~~~~~i~~~l~~~~~~-----~~v~~~D 403 (445)
T cd05803 349 LQLLAASG--------KPLSEIVDELPQYYIS---KTKVT--IAG-------EALERLLKKLEAYFKD-----AEASTLD 403 (445)
T ss_pred HHHHHhcC--------CCHHHHHHhchhhhee---eeeee--ccH-------HhHHHHHHHHHHhccc-----CCcccCc
Confidence 99988643 4599999999986432 24565 887 4578899999764321 2567899
Q ss_pred ceEEEecCeEEEEEecCCCceeEEEEeeCCHHHHHHHHHHH
Q 012560 399 GVRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAV 439 (461)
Q Consensus 399 Glki~~~~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~ 439 (461)
|+|++++++|+|||||||||++|||+|+.|++.++++++.+
T Consensus 404 Gik~~~~~~W~liRpS~teP~~riy~Ea~s~e~a~~l~~~~ 444 (445)
T cd05803 404 GLRLDSEDSWVHVRPSNTEPIVRIIAEAPTQDEAEALADRF 444 (445)
T ss_pred eEEEecCCeEEEEeccCCccEEEEEEecCCHHHHHHHHHhh
Confidence 99999888999999999999999999999999999998875
No 6
>cd05800 PGM_like2 This PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily and is found in both archaea and bacteria. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four structural domains (subdomains) with a centrally located active site formed by four loops, one from each subdomain. All four subdomains are included in this alignment model.
Probab=100.00 E-value=8.7e-79 Score=630.91 Aligned_cols=402 Identities=28% Similarity=0.323 Sum_probs=335.9
Q ss_pred CHHHHHHHHHHhCCCcEEEe-CCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQY-GLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDIL 79 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~-g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~i 79 (461)
||++++++||+++|++|+++ |.+|||+++|++. +++++|||||||||||++||||||++++|.++.++..+.+
T Consensus 54 ~l~~a~~~gL~s~G~~V~~~~g~~pTP~~~~a~~------~~~~~gGI~ITaSHnp~~~ngiK~~~~~G~~i~~~~~~~i 127 (461)
T cd05800 54 EFARAVAEVLAANGIDVYLSDRPVPTPAVSWAVK------KLGAAGGVMITASHNPPEYNGVKVKPAFGGSALPEITAAI 127 (461)
T ss_pred HHHHHHHHHHHHCCCEEEEcCCCCCchHHHHHHH------HhCCCeeEEEccCCCCcccCeEEEeCCCCCcCChHHHHHH
Confidence 68999999999999999999 7999999999997 5689999999999999999999999999999887777767
Q ss_pred HHHHhHHhhhhhcccccccccCCCcEEEEcchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012560 80 ERAADIYKQFMVEGLTNLEKQTSTSIKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (461)
Q Consensus 80 e~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~lg 159 (461)
|+.... +.+........+.+...+..+.|++++.+.++.+. ++++++|||+||+||+++.+++++|++||
T Consensus 128 e~~~~~------~~~~~~~~~~~g~i~~~~~~~~Y~~~l~~~~~~~~----i~~~~~kivvd~~~G~~~~~~~~il~~lg 197 (461)
T cd05800 128 EARLAS------GEPPGLEARAEGLIETIDPKPDYLEALRSLVDLEA----IREAGLKVVVDPMYGAGAGYLEELLRGAG 197 (461)
T ss_pred HHHHhh------ccccccccccCCceeecCCHHHHHHHHHHHhChhh----hhcCCceEEEeCCCCCcHHHHHHHHHHcC
Confidence 664321 11110001234556656888999999999875432 23579999999999999999999999999
Q ss_pred CCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012560 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (461)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~~l~~~ 239 (461)
|+++ .+|+.|||.||++.|+|+ ++++..+.+.|++.+||+|+++||||||++++|++|+++++|++++|+++++++..
T Consensus 198 ~~v~-~~~~~~dg~F~~~~p~p~-~~~l~~l~~~v~~~~ad~Gia~D~DgDR~~vvd~~G~~l~~d~~~al~a~~ll~~~ 275 (461)
T cd05800 198 VDVE-EIRAERDPLFGGIPPEPI-EKNLGELAEAVKEGGADLGLATDGDADRIGAVDEKGNFLDPNQILALLLDYLLENK 275 (461)
T ss_pred CCEE-EeeCCcCCCCCCCCCCCC-HHHHHHHHHHHHhcCCCEEEEECCCCCeEEEEeCCCceeCHHHHHHHHHHHHHHcC
Confidence 9998 589999999999999999 68899999999999999999999999999999999999999999999999999863
Q ss_pred -CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecCCccCCcHHHHHHHH
Q 012560 240 -PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVKL 318 (461)
Q Consensus 240 -~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~l 318 (461)
+...||.+..|| .+++.+++++|+++++||||+++++++|.+.+ .+||+|+|||++|+++++.+||+++++++
T Consensus 276 ~~~~~vv~~v~ss-~~~~~~a~~~g~~v~~t~~G~~~v~~~~~~~~-----~~~g~E~sg~~~~~~~~~~~Dgi~a~l~i 349 (461)
T cd05800 276 GLRGPVVKTVSTT-HLIDRIAEKHGLPVYETPVGFKYIAEKMLEED-----VLIGGEESGGLGIRGHIPERDGILAGLLL 349 (461)
T ss_pred CCCCcEEEEcchH-HHHHHHHHHhCCeeeeCCCCHHHHHHHHhhCC-----eEEEEcCcCceeCCCCCCCchHHHHHHHH
Confidence 334577565555 57788999999999999999999999998754 47999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHhhccCCCcc-ceeeeeecccCCcccCCccchhhHHHHHHHHhhhcC-CCCCC-CCCc
Q 012560 319 LNKLASARAAGRGGGSKVLTDLVDGLEEPGFA-VELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDS-DPKLQ-KAPV 395 (461)
Q Consensus 319 l~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~-~~~~~-~~~~ 395 (461)
|++|+..+ ++|+++++++|++|.. ...+..+. |+| +.++++|++|.+.... ..+.. ..++
T Consensus 350 le~la~~~--------~~L~~l~~~l~~~~g~~~~~~~~i~--~~~-------~~~~~v~~~l~~~~~~~~~~~~~~~~~ 412 (461)
T cd05800 350 LEAVAKTG--------KPLSELVAELEEEYGPSYYDRIDLR--LTP-------AQKEAILEKLKNEPPLSIAGGKVDEVN 412 (461)
T ss_pred HHHHHhhC--------CCHHHHHHHHHHHhCCCceeecCee--cCH-------HHHHHHHHHHhccCchhhCCceeEEEE
Confidence 99987642 4599999999975321 22334455 887 4578899999874321 11111 2467
Q ss_pred ccCceEEEe-cCeEEEEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHh
Q 012560 396 NYEGVRVSG-SGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAAT 443 (461)
Q Consensus 396 ~~dGlki~~-~~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v 443 (461)
.+||+|+++ +++|++||||||||++|||+|+.|++.++++++.+.+.+
T Consensus 413 ~~dGvrv~~~d~~wvlvRpS~tep~iriy~Ea~~~~~a~~l~~~~~~~~ 461 (461)
T cd05800 413 TIDGVKLVLEDGSWLLIRPSGTEPLLRIYAEAPSPEKVEALLDAGKKLA 461 (461)
T ss_pred ecCeEEEEEcCCcEEEEEcCCCCceEEEEEecCCHHHHHHHHHHHHhhC
Confidence 789999998 567999999999999999999999999999999887753
No 7
>PRK15414 phosphomannomutase CpsG; Provisional
Probab=100.00 E-value=2.5e-78 Score=624.58 Aligned_cols=396 Identities=24% Similarity=0.346 Sum_probs=327.6
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHH-HHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDI-KDIL 79 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~-~~~i 79 (461)
||++++++||+++|++|+++|.+|||+++|++. +++++|||||||||||++|||+|++.++|.+++++. .+.+
T Consensus 53 ~l~~a~a~gL~s~Gi~V~~~g~~pTP~~~~av~------~~~~~gGI~ITaSHNP~~~NG~Ki~~~~g~~~~~~~~~~~i 126 (456)
T PRK15414 53 TLKLALAKGLQDAGVDVLDIGMSGTEEIYFATF------HLGVDGGIEVTASHNPMDYNGMKLVREGARPISGDTGLRDV 126 (456)
T ss_pred HHHHHHHHHHHHCCCeEEEeCCcChHHHHHhhh------ccCCCeEEEEecCCCCCCCCCEEeecCCCcccCcHHHHHHH
Confidence 689999999999999999999999999999997 568899999999999999999999999887766643 1223
Q ss_pred HHHHhHHhhhhhcccccccccCCCcEEEEcchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHH---Hh
Q 012560 80 ERAADIYKQFMVEGLTNLEKQTSTSIKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKV---LE 156 (461)
Q Consensus 80 e~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~l---l~ 156 (461)
++... +++++.......+.+...+..+.|++++.+.++.. +.+++|||+||+||+++.+++.+ |+
T Consensus 127 ~~~~~------~~~~~~~~~~~~g~~~~~~~~~~Yi~~l~~~id~~------~~~~lkVvvD~~~G~~~~~~~~l~~~l~ 194 (456)
T PRK15414 127 QRLAE------ANDFPPVDETKRGRYQQINLRDAYVDHLFGYINVK------NLTPLKLVINSGNGAAGPVVDAIEARFK 194 (456)
T ss_pred HHHHh------cCCcccccccCCCcEEecCcHHHHHHHHHHhcccc------cCCCCEEEEECCCCcchhhHHHHHHHHH
Confidence 33221 11221111123355666678899999998887531 23689999999999999999999 99
Q ss_pred hcCCCc--ccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHH
Q 012560 157 PLGAKT--SGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAI 234 (461)
Q Consensus 157 ~lg~~v--~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~ 234 (461)
+|||++ + .+|+.|||.||++.|||+.+++++.+.+.|++.+||+|+++||||||++++|++|+++++|++++|++++
T Consensus 195 ~lG~~v~v~-~~~~~pdg~F~~~~p~P~~~~~l~~l~~~v~~~~adlGia~DgDaDR~~~vde~G~~l~~d~~~~l~a~~ 273 (456)
T PRK15414 195 ALGAPVELI-KVHNTPDGNFPNGIPNPLLPECRDDTRNAVIKHGADMGIAFDGDFDRCFLFDEKGQFIEGYYIVGLLAEA 273 (456)
T ss_pred hcCCCeEEE-EeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcceEEEECCCCCEecHHHHHHHHHHH
Confidence 999944 4 5789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecCCccCCcHHHH
Q 012560 235 VLEEHPGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYL 314 (461)
Q Consensus 235 ~l~~~~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~a 314 (461)
+++.++++.+|.++.+|+.+. .+++++|+++++|||||+||+++|.+.+ ++||||+|||++|+++.+.+||+++
T Consensus 274 ll~~~~g~~vv~~~~~s~~l~-~~~~~~g~~~~~t~vG~~~i~~~m~~~~-----~~~ggE~sgg~~~~~~~~~~Dgi~a 347 (456)
T PRK15414 274 FLEKNPGAKIIHDPRLSWNTV-DVVTAAGGTPVMSKTGHAFIKERMRKED-----AIYGGEMSAHHYFRDFAYCDSGMIP 347 (456)
T ss_pred HHHhCCCCeeccCchhhhHHH-HHHHHcCCEEEEecCcHHHHHHHHHhcC-----CeEEEcccceEEeCCCCCCccHHHH
Confidence 998776656887788888554 5778889999999999999999999865 4799999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCC-ccceeeeeecccCCcccCCccchhhHHHHHHHHhhhcCCCCCCCC
Q 012560 315 MVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPG-FAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKA 393 (461)
Q Consensus 315 a~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~ 393 (461)
+++++++|+.. + ++|+++++++++.+ .+..++.++. |+| +.++++|+++.+.. .+
T Consensus 348 ~~~ile~la~~----~----~~L~~l~~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~~~~~~~-------~~ 403 (456)
T PRK15414 348 WLLVAELVCLK----G----KTLGELVRDRMAAFPASGEINSKLA--QPV-------EAINRVEQHFSREA-------LA 403 (456)
T ss_pred HHHHHHHHHcc----C----CCHHHHHHHHHHhcCCCCccccCCC--CHH-------HHHHHHHHHhcccc-------Cc
Confidence 99999988753 2 45999999766544 2233333444 666 34567777664321 24
Q ss_pred CcccCceEEEecCeEEEEEecCCCceeEEEEeeC-CHHHHHHHHHHHHHHhhc
Q 012560 394 PVNYEGVRVSGSGGWFLLRLSLHDPVLPLNIEAP-SREDAVKLGLAVAAATKE 445 (461)
Q Consensus 394 ~~~~dGlki~~~~~w~liRpSgTeP~irvy~Ea~-~~~~a~~l~~~~~~~v~~ 445 (461)
++.+||+|+++++||++||||||||++|||+||. +++.++++.+.+.+.|.+
T Consensus 404 ~~~~DGvki~~~~~~lllRpSgTEP~iri~~Ea~~~~~~~~~~~~~~~~~~~~ 456 (456)
T PRK15414 404 VDRTDGISMTFADWRFNLRSSNTEPVVRLNVESRGDVPLMEARTRTLLTLLNE 456 (456)
T ss_pred EEecceeEEEeCCceEEEecCCCceEEEEEEecCCCHHHHHHHHHHHHHHhhC
Confidence 7789999999888888999999999999999998 899999999988887753
No 8
>cd05805 MPG1_transferase GTP-mannose-1-phosphate guanyltransferase (MPG1 transferase), also known as GDP-mannose pyrophosphorylase, is a bifunctional enzyme with both phosphomannose isomerase (PMI) activity and GDP-mannose phosphorylase (GMP) activity. The protein contains an N-terminal NTP transferase domain, an L-beta-H domain, and a C-terminal PGM-like domain that belongs to the alpha-D-phosphohexomutase superfamily. This subfamily is limited to bacteria and archaea. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this group appear to lack conserved residues necessary for metal binding and catalytic activity. Other members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional
Probab=100.00 E-value=3e-78 Score=623.19 Aligned_cols=392 Identities=22% Similarity=0.305 Sum_probs=326.9
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie 80 (461)
||++++++||+++|++|+++|.+|||+++|++. +++++|||||||||||++||||||++++|.++.++.++.++
T Consensus 49 ~~~~a~~~gL~s~G~~V~~~g~~pTP~~~~av~------~~~~~gGi~ITaSHnp~~~nGiK~~~~~G~~i~~~~~~~Ie 122 (441)
T cd05805 49 MLKRALISGLLSTGVNVRDLGALPLPVARYAIR------FLGASGGIHVRTSPDDPDKVEIEFFDSRGLNISRAMERKIE 122 (441)
T ss_pred HHHHHHHHHHHhCCCeEEecCCcCchHHHHHHH------hcCCCeeEEEEeCCCCccceEEEEECCCCCcCCHHHHHHHH
Confidence 589999999999999999999999999999997 56889999999999999999999999999998887777666
Q ss_pred HHHhHHhhhhhcccccccccCCCcEEEE-cchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012560 81 RAADIYKQFMVEGLTNLEKQTSTSIKRV-DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (461)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~lg 159 (461)
+.... +.+.+.. ....+.+... +..+.|++++.+.++.+. ++.+++|||+||+||+++.+++++|++||
T Consensus 123 ~~~~~-~~~~~~~-----~~~~g~~~~~~~~~~~Y~~~l~~~i~~~~----i~~~~lkIvvd~~~G~~~~~~~~ll~~lG 192 (441)
T cd05805 123 NAFFR-EDFRRAH-----VDEIGDITEPPDFVEYYIRGLLRALDTSG----LKKSGLKVVIDYAYGVAGIVLPGLLSRLG 192 (441)
T ss_pred HHHhh-hhhcccc-----HhhcCccccchhHHHHHHHHHHHHhCHHH----HhhcCCeEEEECCCchHHHHHHHHHHHcC
Confidence 54321 1111100 0112444433 578889999988775322 23579999999999999999999999999
Q ss_pred CCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012560 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (461)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~~l~~~ 239 (461)
|+++ .+++.+||.|+ ..|+| .+++++.+.+.|+++++|+|+++||||||++++|++|+++++|++++|+++++++..
T Consensus 193 ~~v~-~i~~~~d~~~~-~~~~~-~~~~l~~l~~~v~~~~adlgia~DgDaDR~~vvd~~G~~~~gd~l~~l~a~~ll~~~ 269 (441)
T cd05805 193 CDVV-ILNARLDEDAP-RTDTE-RQRSLDRLGRIVKALGADFGVIIDPNGERLILVDEAGRVISDDLLTALVSLLVLKSE 269 (441)
T ss_pred CEEE-EEecccCCccC-CCCcc-chhHHHHHHHHHHhCCCCEEEEEcCCCCEEEEECCCCCEEChhHHHHHHHHHHHHhC
Confidence 9998 58899999852 34555 578999999999999999999999999999999999999999999999999998855
Q ss_pred CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecCCccCCcHHHHHHHHH
Q 012560 240 PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVKLL 319 (461)
Q Consensus 240 ~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ll 319 (461)
+...||.++.||. +++.+++++|+++++|+|||+|++++|.+ + ++||||+|||++|+++.+.+||++++++++
T Consensus 270 ~~~~vv~~v~ss~-~l~~~a~~~g~~~~~t~vG~~~i~~~m~~-~-----~~~ggE~sG~~~~~~~~~~~Dgi~a~l~ll 342 (441)
T cd05805 270 PGGTVVVPVTAPS-VIEQLAERYGGRVIRTKTSPQALMEAALE-N-----VVLAGDGDGGFIFPEFHPGFDAIAALVKIL 342 (441)
T ss_pred CCCeEEEEccchH-HHHHHHHHcCCEEEEEeCChHHHHHHHHh-c-----ccccccCCCcEEccccccCchHHHHHHHHH
Confidence 5556776666665 66778899999999999999999999987 4 469999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCcccHHHHHhhccCCCccceeeeeecccCCcccCCccchhhHHHHHHHHhhhcCCCCCCCCCcccCc
Q 012560 320 NKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYEG 399 (461)
Q Consensus 320 ~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~dG 399 (461)
++|+.. + ++|+++++++|+++.. +..++ |+| +.++++|++|.+.... .+++++||
T Consensus 343 e~la~~----~----~~l~~l~~~l~~~~~~---~~~~~--~~~-------~~~~~~~~~l~~~~~~-----~~~~~~DG 397 (441)
T cd05805 343 EMLART----N----ISLSQIVDELPRFYVL---HKEVP--CPW-------EAKGRVMRRLIEEAPD-----KSIELIDG 397 (441)
T ss_pred HHHHhc----C----CCHHHHHHhCchhhee---eeEEE--CCh-------HHhhHHHHHHHHhcCC-----CCceecce
Confidence 988753 2 4599999999987543 23344 776 3356799999765421 14677999
Q ss_pred eEEEecCeEEEEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHh
Q 012560 400 VRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAAT 443 (461)
Q Consensus 400 lki~~~~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v 443 (461)
+|+.+++||+|||||||||++|||+||.|++.++++++.+.++|
T Consensus 398 vri~~~~gW~liRpS~TeP~iri~~Ea~~~~~~~~l~~~~~~~~ 441 (441)
T cd05805 398 VKIYEDDGWVLVLPDADEPLCHIYAEGSDQERAEELTEFYVEKV 441 (441)
T ss_pred eEEecCCCEEEEecCCCCCEEEEEEecCCHHHHHHHHHHHHhhC
Confidence 99998889999999999999999999999999999999988764
No 9
>cd03087 PGM_like1 This archaeal PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=100.00 E-value=1.5e-77 Score=617.97 Aligned_cols=391 Identities=29% Similarity=0.431 Sum_probs=331.1
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie 80 (461)
||++++++||+++|++|+++|.+|||+++|++. +++ .|||||||||||++||||||++++|.++.++.++.+|
T Consensus 48 ~l~~a~~~gL~~~G~~V~~~g~~~tP~~~~~v~------~~~-~gGi~ItaShnp~~~ngiK~~~~~G~~i~~~~~~~Ie 120 (439)
T cd03087 48 MLKNAVIAGLLSAGCDVIDIGIVPTPALQYAVR------KLG-DAGVMITASHNPPEYNGIKLVNPDGTEFSREQEEEIE 120 (439)
T ss_pred HHHHHHHHHHHHCCCeEEEcCccChHHHHHHHH------hcC-CceEEEEeCCCCHHHCcEEEECCCCCcCCHHHHHHHH
Confidence 689999999999999999999999999999997 567 8999999999999999999999999998887777776
Q ss_pred HHHhHHhhhhhcccccccccCCCcEEEEc-chHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012560 81 RAADIYKQFMVEGLTNLEKQTSTSIKRVD-YMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (461)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~lg 159 (461)
+... .++++.......+.+...+ +.+.|++++.+.++.+ ..+++||++|++||+++.+++++|++||
T Consensus 121 ~~~~------~~~~~~~~~~~~g~~~~~~~~~~~Y~~~l~~~~~~~------~~~~lkIvid~~~G~~~~~~~~~l~~lg 188 (439)
T cd03087 121 EIIF------SERFRRVAWDEVGSVRREDSAIDEYIEAILDKVDID------GGKGLKVVVDCGNGAGSLTTPYLLRELG 188 (439)
T ss_pred HHHh------cCCccccccccCeeEEecCccHHHHHHHHHHhcCcc------cCCCCEEEEECCCCchHHHHHHHHHHcC
Confidence 5432 1111100011224555556 8899999998887421 1468999999999999999999999999
Q ss_pred CCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012560 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (461)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~~l~~~ 239 (461)
|+++ .+|+.|||.||++.|+|. +++++.+.+.|++.++|+|+++||||||++++|++|+++++|++++|+++++++.
T Consensus 189 ~~v~-~~~~~~d~~f~~~~p~p~-~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~l~a~~ll~~- 265 (439)
T cd03087 189 CKVI-TLNANPDGFFPGRPPEPT-PENLSELMELVRATGADLGIAHDGDADRAVFVDEKGRFIDGDKLLALLAKYLLEE- 265 (439)
T ss_pred CEEE-EECCcCCCCCCCCCCCCC-HHHHHHHHHHHHhcCCCEEEEEcCCCceEEEECCCCCEechHHHHHHHHHHHHhc-
Confidence 9998 589999999999999998 7889999999999999999999999999999999999999999999999999987
Q ss_pred CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecCCccCCcHHHHHHHHH
Q 012560 240 PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVKLL 319 (461)
Q Consensus 240 ~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ll 319 (461)
++..||.+.. |+.+++.+++++|+++++|+|||+|++++|.+.+ ++||+|+|||++|+++.+.+||++++++++
T Consensus 266 ~~~~vv~~v~-ss~~l~~~a~~~g~~~~~~~~G~k~i~~~m~~~~-----~~~ggE~sgg~~~~~~~~~~Dgi~a~~~ll 339 (439)
T cd03087 266 GGGKVVTPVD-ASMLVEDVVEEAGGEVIRTPVGDVHVAEEMIENG-----AVFGGEPNGGWIFPDHQLCRDGIMTAALLL 339 (439)
T ss_pred CCCcEEEecc-chHHHHHHHHHcCCEEEEEecChHHHHHHHHhcC-----CeEEecCCCCEecCCcCCcCCHHHHHHHHH
Confidence 4455775555 5557788899999999999999999999998754 579999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCcccHHHHHhhccCCCccceeeeeecccCCcccCCccchhhHHHHHHHHhhhcCCCCCCCCCcccCc
Q 012560 320 NKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYEG 399 (461)
Q Consensus 320 ~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~dG 399 (461)
++|+.. + +|+++++++|+++.. +.++. |+| +.++++|++|.+..... ...++.+||
T Consensus 340 e~l~~~-~--------~l~~~~~~~~~~~~~---~~~v~--~~~-------~~~~~i~~~l~~~~~~~---~~~i~~~DG 395 (439)
T cd03087 340 ELLAEE-K--------PLSELLDELPKYPLL---REKVE--CPD-------EKKEEVMEAVEEELSDA---DEDVDTIDG 395 (439)
T ss_pred HHHhcC-C--------CHHHHHHhccccccc---ccccc--CCh-------HhHHHHHHHHHHhhhhc---cCCeeecce
Confidence 988754 2 399999999986532 23444 887 45789999998754210 125778999
Q ss_pred eEEEecCeEEEEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHh
Q 012560 400 VRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAAT 443 (461)
Q Consensus 400 lki~~~~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v 443 (461)
+|+++++||++||||||||++|||+|+.|++.+++++..+.+++
T Consensus 396 ~k~~~~~~WvliRpS~tep~~rvy~Ea~~~~~a~~l~~~~~~~~ 439 (439)
T cd03087 396 VRIEYEDGWVLIRPSGTEPKIRITAEAKTEERAKELLEEGRSKV 439 (439)
T ss_pred EEEecCCcEEEEeccCCccEEEEEEeeCCHHHHHHHHHHHHhhC
Confidence 99998889999999999999999999999999999999988764
No 10
>COG1109 {ManB} Phosphomannomutase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.7e-76 Score=607.20 Aligned_cols=401 Identities=32% Similarity=0.441 Sum_probs=334.6
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie 80 (461)
||++++++||+++|++|+++|.+|||+++|++. ++++++||||||||||++|||||+++++|.++++++++.++
T Consensus 59 ~~~~a~~~gl~~~G~~v~~~g~~pTP~~~f~~~------~~~~~~gvmITASHNP~~yNGiK~~~~~G~~i~~~~e~~Ie 132 (464)
T COG1109 59 MLAAALAAGLTSAGIDVYDLGLVPTPAVAFATR------KLGADAGVMITASHNPPEYNGIKFFGSDGGKISDDIEEEIE 132 (464)
T ss_pred HHHHHHHHHHHHCCCeEEEeCCCCCHHHHHHHH------hcCCCeEEEEecCCCCchhCcEEEEcCCCCcCChHHHHHHH
Confidence 689999999999999999999999999999997 67888999999999999999999999999998888887776
Q ss_pred HHHhHHhhhhhcccccccccCCCcEEEEc-chHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012560 81 RAADIYKQFMVEGLTNLEKQTSTSIKRVD-YMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (461)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~lg 159 (461)
+.......+.+. .....+.+...+ ..+.|++.+.+.+..+ ..++++|||+||+||+++.+++++|++||
T Consensus 133 ~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~Y~~~i~~~~~~~-----~~~~~lkVv~d~~nGaa~~~~~~ll~~lG 202 (464)
T COG1109 133 AILAEEVDLPRP-----SWGELGRLKRIPDALDRYIEFIKSLVDVD-----LKLRGLKVVVDCANGAAGLVAPRLLKELG 202 (464)
T ss_pred HHHhcccccccc-----ccccCCceeEcchhHHHHHHHHHHhcccc-----cccCCcEEEEECCCCchhHHHHHHHHHcC
Confidence 533211011111 012356677766 8999999999998643 24567999999999999999999999999
Q ss_pred CCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012560 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (461)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~~l~~~ 239 (461)
|+++ .+++.|||.||++.|||+.+..+ .+.+.+++.++|+|+++||||||++++|++|+++++|++++|++.++++..
T Consensus 203 ~~vv-~~~~~pDg~fp~~~p~p~~~~~~-~l~~~v~~~~aDlgia~DgDaDR~~~vd~~G~~~~Gd~i~~lla~~l~~~~ 280 (464)
T COG1109 203 AEVV-SINCDPDGLFPNINPNPGETELL-DLAKAVKEHGADLGIAFDGDADRLIVVDERGNFVDGDQILALLAKYLLEKG 280 (464)
T ss_pred CEEE-EecCCCCCCCCCCCCCCCCccHH-HHHHHHHhcCCCEEEEecCCCceEEEEcCCCCEeCccHHHHHHHHHHHhcC
Confidence 9998 58999999999988999987766 888899888999999999999999999999999999999999999999865
Q ss_pred CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecCCccCCcHHHHHHHHH
Q 012560 240 PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVKLL 319 (461)
Q Consensus 240 ~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ll 319 (461)
....||.+++||. .++.+++.+|+++++|+|||+||.++|.+.++ +||||+|||++|+++...+||+++++.++
T Consensus 281 ~~~~vV~tv~ss~-~~~~i~~~~g~~~~~t~vG~~~i~~~~~~~~~-----~~g~E~sg~~~~~~~~~~~Dgi~aal~il 354 (464)
T COG1109 281 KLPTVVTTVMSSL-ALEKIAKKLGGKVVRTKVGDKYIAEKMRENGA-----VFGGEESGHIIFPDHVRTGDGLLAALLVL 354 (464)
T ss_pred CCCeEEEecccch-hHHHHHHHcCCeEEEecCchHHHHHHHHhcCC-----eEEEcccCCEEECCCCcCCcHHHHHHHHH
Confidence 4336887777774 66778899999999999999999999998775 69999999999999999999999999988
Q ss_pred HHHHHHHHcCCCCCcccHHHHHhh-ccCCCccceeeeeecccCCcccCCccchhhHHHHHHHHhhhcCCCCCCCCCcccC
Q 012560 320 NKLASARAAGRGGGSKVLTDLVDG-LEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYE 398 (461)
Q Consensus 320 ~~l~~~~~~~~~~~~~~Ls~ll~~-lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~d 398 (461)
+.++... ++|++++.. +|+++.+.+..+++. . +.+..+++++.+..... ..+..+|
T Consensus 355 el~~~~~--------~~lsel~~~~~~~~~~~~~~~~~~~----~-------~~~~~~~~~~~~~~~~~----~~~~~id 411 (464)
T COG1109 355 ELLAESG--------KSLSELLAELLPKYPQSVEINVRVT----D-------EGKAEVLEKLLEELREA----KKVDTID 411 (464)
T ss_pred HHHHHhC--------CCHHHHHHhhccccCCcceEeEEEc----c-------chhhhHHHHHHHhCccc----ceeeeee
Confidence 8776543 349999999 888765444444433 2 11224566665543211 2466789
Q ss_pred ceEEEecCeEE-EEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcCCC
Q 012560 399 GVRVSGSGGWF-LLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFPA 448 (461)
Q Consensus 399 Glki~~~~~w~-liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v~~~~~ 448 (461)
|+|+.+++||. +||||||||++|||+|+.+++.++++++.+.+.|+.++.
T Consensus 412 gv~~~~~~g~~~lvRpSGTEP~lrvy~Ea~~~~~~~~~~~~~~~~v~~~~~ 462 (464)
T COG1109 412 GVKVELEDGGRVLVRPSGTEPLIRVYVEAKDEELAEELAEEIAELVREALG 462 (464)
T ss_pred eEEEEeCCCcEEEEEeCCCceEEEEEEEECCHHHHHHHHHHHHHHHHhhhc
Confidence 99999887766 999999999999999999999999999999999988764
No 11
>TIGR01132 pgm phosphoglucomutase, alpha-D-glucose phosphate-specific. This enzyme interconverts alpha-D-glucose-1-P and alpha-D-glucose-6-P.
Probab=100.00 E-value=5.3e-75 Score=610.37 Aligned_cols=409 Identities=21% Similarity=0.256 Sum_probs=320.4
Q ss_pred CHHHHHHHHHHhCCCcEEEe---CCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQY---GLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKD 77 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~---g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~ 77 (461)
||++++++||+++|++|+++ |.+|||+++|++...+. .++++.+||||||||||++||||||++++|.++.++.++
T Consensus 92 ~~~~a~a~gL~s~Gi~V~~~~~~G~~pTP~~~~av~~~~~-~~~~~~gGI~ITASHNP~e~NGiK~~~~~G~~i~~~~~~ 170 (543)
T TIGR01132 92 PAFISVLEVLAANGVEVIVQENNGFTPTPAVSHAILTHNK-KGEPLADGIVITPSHNPPEDGGIKYNPPNGGPADTEATQ 170 (543)
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCCcCCchHHHHHHHHhcc-cccccceEEEEeCCCCCCccCeEEEECCCCCCCChHHHH
Confidence 68999999999999999984 89999999999973210 012378899999999999999999999999998888777
Q ss_pred HHHHHHhHHhhhhh---ccccccc--c-cCCCcEEEEcchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHH
Q 012560 78 ILERAADIYKQFMV---EGLTNLE--K-QTSTSIKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFA 151 (461)
Q Consensus 78 ~ie~~~~~~~~~~~---~~~~~~~--~-~~~~~i~~~~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~ 151 (461)
.+|+.... +.+ ++++... . ...+.+...+..+.|++.+.+.++.+. ++.+++|||+||+||+++.++
T Consensus 171 ~Ie~~i~~---~~~~~~e~~~~~~~~~~~~~g~~~~~d~~~~Y~~~l~~~i~~~~----i~~~~lkVvvD~~~Ga~~~~~ 243 (543)
T TIGR01132 171 AIEDRANA---LLANGLKGVKRLPLAQALASGTVKAHDLVQPYVDGLADIVDMAA----IQKAGLRLGVDPLGGSGIDYW 243 (543)
T ss_pred HHHHHHHH---hhhcccccccccChhhhhccCceecCCcHHHHHHHHHHhhhhhh----hhcCCceEEEeCCCCCcHHHH
Confidence 77754221 111 1121000 0 112344445788999999999886432 235689999999999999999
Q ss_pred HHHHhhcCCCcccceecCCCCCCCCCCCCCC--------chHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCcccc
Q 012560 152 AKVLEPLGAKTSGSQFLEPDGMFPNHIPNPE--------DKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELN 223 (461)
Q Consensus 152 ~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~--------~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~ 223 (461)
+++|++|||+++ .+|+.+||.||.++|+|+ .++++..+.+ ++.++|+|+++||||||++++|++| +++
T Consensus 244 ~~il~~lG~~v~-~l~~~~d~~f~~~~pd~~~~~~~~~~~~e~l~~l~~--~~~~aDlGia~DgDaDR~~vvd~~g-~i~ 319 (543)
T TIGR01132 244 KRIAEKYNLNLT-LVNPQVDPTFRFMTLDKDGKIRMDCSSPYAMAGLLA--LRDKYDLAFGNDPDYDRHGIVTPAG-LMN 319 (543)
T ss_pred HHHHHHcCCCEE-EEcCeeCCCCCCCCCCcccccCCCCCCHHHHHHHhh--cccCCCEEEEeCCCCCCeeEEecCc-eeC
Confidence 999999999998 589999999998766422 2355655555 5889999999999999999999996 699
Q ss_pred chhHHHHHHHHHHHhCC---CC-eEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecc
Q 012560 224 RNRLIALMSAIVLEEHP---GT-TIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGH 299 (461)
Q Consensus 224 ~d~~~~L~~~~~l~~~~---~~-~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~ 299 (461)
+|++++|+++++++.++ +. .|+.+.+|| .+++.+++++|+++++|||||+||+++|.+.+ ++||||+|||
T Consensus 320 gd~~~aLla~~ll~~~~~~~~~~~Vv~tv~sS-~~l~~ia~~~g~~v~~t~vG~k~i~~~m~~~~-----~~~ggEeSgg 393 (543)
T TIGR01132 320 PNHYLAVAINYLFQHRPQWGGDVAVGKTLVSS-AMIDRVVADLGRQLVEVPVGFKWFVDGLFDGS-----FGFGGEESAG 393 (543)
T ss_pred HHHHHHHHHHHHHHhCcccCCCceEEEEeccH-HHHHHHHHHcCCceeecCccHHHHHHHHhcCC-----eEEEEeccCc
Confidence 99999999999998753 33 355454455 57788999999999999999999999998754 5799999999
Q ss_pred eeecC-----CccCCcHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCCccce-eeeeecccCCcccCCccchhh
Q 012560 300 GALKE-----NHWLDDGAYLMVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVE-LRLKIDQNHSDLKGGSFRDYG 373 (461)
Q Consensus 300 ~~~~~-----~~~~~Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 373 (461)
++|++ +.+.+||++++++++++|+..+ ++|+++++++|+++...+ .+..++ |+| +.+
T Consensus 394 ~~~~~~~~~~~~~~~Dgi~a~l~ile~la~~~--------~~L~~ll~~lp~~~~~~~~~~~~~~--~~~-------~~k 456 (543)
T TIGR01132 394 ASFLRFDGTPWSTDKDGIIMCLLAAEITAVTG--------KNPQQHYNELAAKFGAPSYNRIQAP--ATS-------AQK 456 (543)
T ss_pred eEecccCCCCcccCcHHHHHHHHHHHHHHHhC--------CCHHHHHHHHHHHhCCceEEEEecC--ChH-------HHH
Confidence 99955 7888999999999999887643 459999999997654332 344555 877 334
Q ss_pred HHHHHHHHhhhc---CCCCCC---------CCCcccCceEEEecCeEEEEEecCCCceeEEEEee-CCHHHHHHHHHHHH
Q 012560 374 EAVLKHLENRVD---SDPKLQ---------KAPVNYEGVRVSGSGGWFLLRLSLHDPVLPLNIEA-PSREDAVKLGLAVA 440 (461)
Q Consensus 374 ~~v~~~l~~~~~---~~~~~~---------~~~~~~dGlki~~~~~w~liRpSgTeP~irvy~Ea-~~~~~a~~l~~~~~ 440 (461)
+.+ ++|.+... +..+.. ..++++||+|+++++||+|||||||||++|||+|| .|++.++++++++.
T Consensus 457 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DGvki~~~~gWvliRpSgTEP~irvy~Ea~~~~~~~~~l~~~~~ 535 (543)
T TIGR01132 457 ARL-KKLSPEMVSATTLAGDPITARLTAAPGNGAAIGGLKVTTDNGWFAARPSGTEDVYKIYCESFKGEEHLKQIEKEAV 535 (543)
T ss_pred HHH-HHHhccCCChHHhCCceeEEEEeccCCCCccCCeEEEEEcCcEEEEecCCCCceEEEEEEecCCHHHHHHHHHHHH
Confidence 454 78865321 111111 12456899999998899999999999999999999 69999999999999
Q ss_pred HHhhc
Q 012560 441 AATKE 445 (461)
Q Consensus 441 ~~v~~ 445 (461)
+.|+.
T Consensus 536 ~~v~~ 540 (543)
T TIGR01132 536 EIVSE 540 (543)
T ss_pred HHHHH
Confidence 99986
No 12
>PRK07564 phosphoglucomutase; Validated
Probab=100.00 E-value=8.7e-75 Score=608.76 Aligned_cols=409 Identities=21% Similarity=0.248 Sum_probs=321.3
Q ss_pred CHHHHHHHHHHhCCCcEEEe---CCCCchhhhhhhccccCcccCC-----CCeEEEEcCCCCCCCCCeeeEEcCCCCCCC
Q 012560 1 MLQDAVSRGITGAGLDVVQY---GLASTPAMFNSTLTEGDAFFCP-----VDGAIMITASHLPYNRNGLKFFTNAGGLGK 72 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~---g~~~tP~~~~a~~~~~~~~~~~-----a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~ 72 (461)
||++++++||+++|++|+++ |.+|||+++|++. +++ ++|||||||||||++||||||++++|.++.
T Consensus 91 ~~a~a~a~gL~s~Gi~V~~~~~~g~~pTP~~~~av~------~~~~~~~~~~gGImITASHNP~e~NGiK~~~~~G~~i~ 164 (543)
T PRK07564 91 PAIQSALEVLAANGVGVVIVGRGGYTPTPAVSHAIL------KYNGRGGGLADGIVITPSHNPPEDGGIKYNPPNGGPAD 164 (543)
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCCcCCchHHHHHHH------HhCCCccccceeEEEecCCCCcccCeEEEECCCCCcCC
Confidence 68999999999999999966 8999999999997 456 899999999999999999999999999988
Q ss_pred HHHHHHHHHHHhHHhhhhhcccccc--cc-cCCCcEEEEcchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchH
Q 012560 73 PDIKDILERAADIYKQFMVEGLTNL--EK-QTSTSIKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGF 149 (461)
Q Consensus 73 ~~~~~~ie~~~~~~~~~~~~~~~~~--~~-~~~~~i~~~~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~ 149 (461)
++.++.+|...........++++.. .. ...+.+...+..+.|++++.+.++.+. ++.+++|||+||+||+++.
T Consensus 165 ~~~~~~Ie~~~~~~~~~~~e~~~~~~~~~~~~~g~~~~~d~~~~Y~~~l~~~i~~~~----i~~~~lkIvvD~~~G~~~~ 240 (543)
T PRK07564 165 TDVTDAIEARANELLAYGLKGVKRIPLDRALASMTVEVIDPVADYVEDLENVFDFDA----IRKAGLRLGVDPLGGATGP 240 (543)
T ss_pred hHHHHHHHHHHHhhhhcccccccccChhHhccCCcEEecccHHHHHHHHHHhhChhh----hhcCCceEEEecCCCCcHH
Confidence 8877777764321110001111100 00 011345555788999999998876432 2346899999999999999
Q ss_pred HHHHHHhhcCCCcccceecCCCCCCC--------CCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCcc
Q 012560 150 FAAKVLEPLGAKTSGSQFLEPDGMFP--------NHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHE 221 (461)
Q Consensus 150 ~~~~ll~~lg~~v~~~~~~~~d~~f~--------~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~ 221 (461)
+++++|++|||+++ .+++.+||.|+ ++.|+|+.+++|..+.+ ++.++|+|+++||||||++++|+ |++
T Consensus 241 ~~~~ll~~lG~~v~-~l~~~~d~~f~~~~~~~~~~~~p~P~~~~~L~~l~~--~~~~adlGia~DgDgDRl~vvd~-G~~ 316 (543)
T PRK07564 241 YWKAIAERYGLDLT-VVNAPVDPTFNFMPLDDDGKIRMDCSSPYAMAGLLA--LKDAFDLAFANDPDGDRHGIVTP-GGL 316 (543)
T ss_pred HHHHHHHHcCCcEE-EeCCcCCCCCCCCCCCccCCcCCCCChHHHHHHHHh--hccCCCEEEEECCCCCceeEEec-Cee
Confidence 99999999999988 58899999884 56799987777655554 57789999999999999999999 999
Q ss_pred ccchhHHHHHHHHHHHhCC----CCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeee
Q 012560 222 LNRNRLIALMSAIVLEEHP----GTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETS 297 (461)
Q Consensus 222 l~~d~~~~L~~~~~l~~~~----~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~s 297 (461)
+++|++++|+++++++..+ +..||. +++|+.+++.+++++|+++++|+|||||++++|.+.+ ++||||+|
T Consensus 317 i~~d~~~alla~~ll~~~~~~~~~~~Vv~-~v~sS~~l~~ia~~~g~~v~~t~vG~k~i~~~m~~~~-----~~~ggEeS 390 (543)
T PRK07564 317 MNPNHYLAVAIAYLFHHRPGWRAGAGVGK-TLVSSAMIDRVAAKLGRKLYEVPVGFKWFVNGLDDGS-----LGFGGEES 390 (543)
T ss_pred echhHHHHHHHHHHHHhCcCCCCCceEEE-EecchHHHHHHHHHhCCeeeecchHHHHHHHHHhcCc-----eEEEecCc
Confidence 9999999999999987542 225664 4555567788999999999999999999999998743 57999999
Q ss_pred cceeecC-----CccCCcHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCCccc-eeeeeecccCCcccCCccch
Q 012560 298 GHGALKE-----NHWLDDGAYLMVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAV-ELRLKIDQNHSDLKGGSFRD 371 (461)
Q Consensus 298 G~~~~~~-----~~~~~Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~-~~~~~~~~~~~~~~~~~~~~ 371 (461)
||++|+. +.+.+||++++++++++|+..+ ++|++++++||++|.+. ..+..+. |+| +
T Consensus 391 gg~~~~~~~~~~~~~~~Dgi~a~l~ile~la~~~--------~~L~ell~~l~~~~g~~~~~~~~~~--~~~-------~ 453 (543)
T PRK07564 391 AGASFLRRDGSVWTTDKDGLIAVLLAAEILAVTG--------KSPSEIYRELWARFGRPYYSRHDAP--ATP-------E 453 (543)
T ss_pred CCeeecccCCCCccccchHHHHHHHHHHHHHHhC--------CCHHHHHHHHHHHhCCceEEEecCC--ccH-------H
Confidence 9986533 5778999999999999887542 45999999999754322 3444454 776 3
Q ss_pred hhHHHHHHHHhhh---cCCCCCCC--CC-------cccCceEEEecCeEEEEEecCCCceeEEEEee-CCHHHHHHHHHH
Q 012560 372 YGEAVLKHLENRV---DSDPKLQK--AP-------VNYEGVRVSGSGGWFLLRLSLHDPVLPLNIEA-PSREDAVKLGLA 438 (461)
Q Consensus 372 ~~~~v~~~l~~~~---~~~~~~~~--~~-------~~~dGlki~~~~~w~liRpSgTeP~irvy~Ea-~~~~~a~~l~~~ 438 (461)
.++. |+++.+.. .+..+.++ .+ +.+||+|+++++||+|||||||||+||||+|+ .+++.++++++.
T Consensus 454 ~k~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DGlki~~~~gWvlvRpSgTEP~iriy~Ea~~~~~~~~~l~~~ 532 (543)
T PRK07564 454 QKAA-LRKLSPELVGATELAGDPIDASLTEAPGNGAAIGGLKVVTENGWFAARPSGTETTYKIYAESFEGDEHLHQIQKE 532 (543)
T ss_pred HHHH-HHHHhccCCCchhhCCcceEEEEecCcCCcccCCeEEEEEcCCEEEEEccCCCCeEEEEEEecCCHHHHHHHHHH
Confidence 3444 78886532 11112111 12 23899999988889999999999999999999 699999999999
Q ss_pred HHHHhhcCC
Q 012560 439 VAAATKEFP 447 (461)
Q Consensus 439 ~~~~v~~~~ 447 (461)
+.+.|+.++
T Consensus 533 ~~~~~~~~~ 541 (543)
T PRK07564 533 AQEIVADLI 541 (543)
T ss_pred HHHHHHHHh
Confidence 999998743
No 13
>cd05801 PGM_like3 This bacterial PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=100.00 E-value=8.8e-75 Score=606.61 Aligned_cols=406 Identities=20% Similarity=0.230 Sum_probs=316.4
Q ss_pred CHHHHHHHHHHhCCCcEEE---eCCCCchhhhhhhccccCcccCCCC------eEEEEcCCCCCCCCCeeeEEcCCCCCC
Q 012560 1 MLQDAVSRGITGAGLDVVQ---YGLASTPAMFNSTLTEGDAFFCPVD------GAIMITASHLPYNRNGLKFFTNAGGLG 71 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~---~g~~~tP~~~~a~~~~~~~~~~~a~------gGI~ITaSHNP~~~nGiK~~~~~G~~~ 71 (461)
++++++++||+++|++|++ +|.+|||+++|++. ++++. |||||||||||++||||||++++|.++
T Consensus 74 ~~~~~~~~gL~s~Gi~V~~~~~~g~~pTP~~~~av~------~~~~~~~~~~~gGI~ITASHNP~~~NGiK~~~~~G~~~ 147 (522)
T cd05801 74 PAFISALEVLAANGVEVIIQQNDGYTPTPVISHAIL------TYNRGRTEGLADGIVITPSHNPPEDGGFKYNPPHGGPA 147 (522)
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCCCCCchHHHHHHH------HhccccccCCCcEEEEECCCCCcccCEEEEECCCCCCC
Confidence 3667778999999999995 78999999999997 34554 699999999999999999999999998
Q ss_pred CHHHHHHHHHHHhHHhhhhhcccccccc-c--CCCcEEEEcchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCch
Q 012560 72 KPDIKDILERAADIYKQFMVEGLTNLEK-Q--TSTSIKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGG 148 (461)
Q Consensus 72 ~~~~~~~ie~~~~~~~~~~~~~~~~~~~-~--~~~~i~~~~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~ 148 (461)
.+++++.+|........-..++++.... . ..+.+...++.+.|++.+.+.++.+. ++.+++|||+||+||+++
T Consensus 148 ~~~~~~~Ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~l~~~v~~~~----~~~~~lkVvvd~~~G~~~ 223 (522)
T cd05801 148 DTDITRWIEKRANALLANGLKGVKRIPLEAALASGYTHRHDFVTPYVADLGNVIDMDA----IRKSGLRLGVDPLGGASV 223 (522)
T ss_pred CHHHHHHHHHhhhhhhhcccccccccchhhhhccCceecCCcHHHHHHHHHHhhChhh----hhcCCceEEEeCCCCccH
Confidence 8888777776422110000011110000 0 12334445788999999988875432 234689999999999999
Q ss_pred HHHHHHHhhcCCCcccceecCCCCCCCCCCC--------CCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCc
Q 012560 149 FFAAKVLEPLGAKTSGSQFLEPDGMFPNHIP--------NPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGH 220 (461)
Q Consensus 149 ~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p--------~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~ 220 (461)
.+++++|++|||+++ .+++.+||.||.++| +|+.+++++.+.+. ..++|+|+++||||||++++|++|+
T Consensus 224 ~~~~~ll~~lG~~v~-~l~~~~d~~f~~~~p~~~~~~~~~p~~~~~l~~l~~~--~~~adlGia~DgDaDRl~vvd~~G~ 300 (522)
T cd05801 224 PYWQPIAEKYGLNLT-VVNPKVDPTFRFMTLDHDGKIRMDCSSPYAMAGLLKL--KDKFDLAFANDPDADRHGIVTPSAG 300 (522)
T ss_pred HHHHHHHHHcCCCEE-EEcCeeCCCCCCCCCCcccCCCCCCCCHHHHHHHHHh--hcCCCEEEEECCCccceeEEecCCe
Confidence 999999999999987 588999999997655 45557788888776 3489999999999999999999999
Q ss_pred cccchhHHHHHHHHHHHhCC----CCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeee
Q 012560 221 ELNRNRLIALMSAIVLEEHP----GTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIET 296 (461)
Q Consensus 221 ~l~~d~~~~L~~~~~l~~~~----~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~ 296 (461)
+|++|++++|+++++++.++ +..||.+.+||. +++.+++++|+++++|+||||||.++|++.. .+||||+
T Consensus 301 ~l~gd~~~aLla~~ll~~~~~~~~~~~vv~tv~sS~-~l~~ia~~~g~~~~~t~vG~k~i~~~m~~~~-----~~~ggEe 374 (522)
T cd05801 301 LMNPNHYLSVAIDYLFTHRPLWNKSAGVGKTLVSSS-MIDRVAAALGRKLYEVPVGFKWFVDGLLDGS-----LGFGGEE 374 (522)
T ss_pred EECHHHHHHHHHHHHHHhCcccCCCceEEEEcchHH-HHHHHHHHcCCeeeecCccHHHHHHHHhcCC-----eEEEEec
Confidence 99999999999999998754 346777766665 7788999999999999999999999998754 4699999
Q ss_pred ecceeecC-----CccCCcHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCC-ccceeeeeecccCCcccCCccc
Q 012560 297 SGHGALKE-----NHWLDDGAYLMVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPG-FAVELRLKIDQNHSDLKGGSFR 370 (461)
Q Consensus 297 sG~~~~~~-----~~~~~Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~-~~~~~~~~~~~~~~~~~~~~~~ 370 (461)
|||++|++ +.+.+||++++++++++|+..+ ++|++++++||++| .....+.++. |+|
T Consensus 375 Sgg~~~~~~~~~~~~~~~Dgi~a~l~~le~la~~~--------~~L~~~l~~l~~~~g~~~~~~~~v~--~~~------- 437 (522)
T cd05801 375 SAGASFLRRDGTVWTTDKDGIIMCLLAAEILAVTG--------KDPGQLYQELTERFGEPYYARIDAP--ATP------- 437 (522)
T ss_pred cCceEeccCCCCCcccCchHHHHHHHHHHHHHHhC--------CCHHHHHHHHHHHHCcCeeeccCCC--ChH-------
Confidence 99999977 7789999999999999887542 45999999998654 2333344555 776
Q ss_pred hhhHHHHHHHHhh-hc-CCCCCC---------CCCcccCceEEEecCeEEEEEecCCCceeEEEEee-CCHHHHHHHHHH
Q 012560 371 DYGEAVLKHLENR-VD-SDPKLQ---------KAPVNYEGVRVSGSGGWFLLRLSLHDPVLPLNIEA-PSREDAVKLGLA 438 (461)
Q Consensus 371 ~~~~~v~~~l~~~-~~-~~~~~~---------~~~~~~dGlki~~~~~w~liRpSgTeP~irvy~Ea-~~~~~a~~l~~~ 438 (461)
+.++.+++.+.+. .. ...+.. ..++.+||+|+++++||+|||||||||+||||+|+ .|++.++++++.
T Consensus 438 ~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DGvk~~~~~gWvliRpSgTEP~iriy~Ea~~~~~~~~~l~~~ 517 (522)
T cd05801 438 EQKARLKKLSPEQVTATELAGDPILAKLTRAPGNGASIGGLKVTTANGWFAARPSGTEDVYKIYAESFLSEEHLKKIQKE 517 (522)
T ss_pred HHHHHHHHHhccCCCchHhCCCceEEEEecccCCCccCceEEEEEcCeEEEEEccCCCceEEEEEEecCCHHHHHHHHHH
Confidence 3345554433321 00 111110 02346899999988899999999999999999999 699999999888
Q ss_pred HHHH
Q 012560 439 VAAA 442 (461)
Q Consensus 439 ~~~~ 442 (461)
+.+.
T Consensus 518 ~~~~ 521 (522)
T cd05801 518 AQEI 521 (522)
T ss_pred HHHh
Confidence 7764
No 14
>cd03085 PGM1 Phosphoglucomutase 1 (PGM1) catalyzes the bidirectional interconversion of glucose-1-phosphate (G-1-P) and glucose-6-phosphate (G-6-P) via a glucose 1,6-diphosphate intermediate, an important metabolic step in prokaryotes and eukaryotes. In one direction, G-1-P produced from sucrose catabolism is converted to G-6-P, the first intermediate in glycolysis. In the other direction, conversion of G-6-P to G-1-P generates a substrate for synthesis of UDP-glucose which is required for synthesis of a variety of cellular constituents including cell wall polymers and glycoproteins. The PGM1 family also includes a non-enzymatic PGM-related protein (PGM-RP) thought to play a structural role in eukaryotes, as well as pp63/parafusin, a phosphoglycoprotein that plays an important role in calcium-regulated exocytosis in ciliated protozoans. PGM1 belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl t
Probab=100.00 E-value=6.8e-75 Score=606.97 Aligned_cols=427 Identities=22% Similarity=0.246 Sum_probs=325.9
Q ss_pred CHHHHHHHHHHhCCCcEEEe---CCCCchhhhhhhccccCcccCCCCeEEEEcCCCCC---CCCCeeeEEcCCCCCCCHH
Q 012560 1 MLQDAVSRGITGAGLDVVQY---GLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLP---YNRNGLKFFTNAGGLGKPD 74 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~---g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP---~~~nGiK~~~~~G~~~~~~ 74 (461)
+|+++++++|+++|++|+++ |.+|||+++|+++ +++|+||||||||||| ++||||||++++|.++.++
T Consensus 64 ~~a~~~a~~L~~~G~~V~~~~~~G~~pTP~l~fav~------~~~a~gGImITASHNP~~~~eyNGiK~~~~~G~~i~~~ 137 (548)
T cd03085 64 EAIQIIIKIAAANGVGKVVVGQNGLLSTPAVSAVIR------KRKATGGIILTASHNPGGPEGDFGIKYNTSNGGPAPES 137 (548)
T ss_pred HHHHHHHHHHHHCCCeEEEeCCCCccCchHHHHHHH------hcCCCeEEEEecCCCCCCCCcCCcEEEecCCCCcCCcH
Confidence 58999999999999999999 7999999999997 6789999999999999 7999999999999998877
Q ss_pred HHHHHHHHHhHHhhhhhcccccccccCCCc---------EEEEcchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCC
Q 012560 75 IKDILERAADIYKQFMVEGLTNLEKQTSTS---------IKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNG 145 (461)
Q Consensus 75 ~~~~ie~~~~~~~~~~~~~~~~~~~~~~~~---------i~~~~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G 145 (461)
.++.++...+..+...+++++.......+. ....+..+.|++.+.+.++.+.+......+++|||+||+||
T Consensus 138 ~~~~I~~~i~~ie~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~d~~~~Yi~~l~~~v~~~~i~~~~~~~~lkVVvD~~nG 217 (548)
T cd03085 138 VTDKIYEITKKITEYKIADDPDVDLSKIGVTKFGGKPFTVEVIDSVEDYVELMKEIFDFDAIKKLLSRKGFKVRFDAMHG 217 (548)
T ss_pred HHHHHHHHHHhccccccccccccChhhcCceeecccCCceEEecCHHHHHHHHHhhhCHHHHhhhcccCCCEEEEeCCcc
Confidence 665554321211111122211000011121 23346789999999888753322100013689999999999
Q ss_pred CchHHHHHHHh-hcCCCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccc
Q 012560 146 AGGFFAAKVLE-PLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNR 224 (461)
Q Consensus 146 ~~~~~~~~ll~-~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~ 224 (461)
+++.+++.+|+ +|||+++..+|+.|||.||++.|||+ ++++.++.+.|++.+||+|+++||||||++++|+ |+++.+
T Consensus 218 ag~~~~~~lL~~~LG~~~v~~i~~~pDg~Fp~~~P~P~-~~~l~~L~~~V~~~~ADlGia~DgDaDRl~vvd~-G~~i~~ 295 (548)
T cd03085 218 VTGPYAKKIFVEELGAPESSVVNCTPLPDFGGGHPDPN-LTYAKDLVELMKSGEPDFGAASDGDGDRNMILGK-GFFVTP 295 (548)
T ss_pred hhHHHHHHHHHHhcCCCceEEEeCeeCCCCCCCCCCCc-HHHHHHHHHHHhccCCCEEEEECCCCCceEEEec-CEEecC
Confidence 99999999996 89998732589999999999999999 6889999999999999999999999999999999 999999
Q ss_pred hhHHHHHHHHHHHh----CCC-CeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecc
Q 012560 225 NRLIALMSAIVLEE----HPG-TTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGH 299 (461)
Q Consensus 225 d~~~~L~~~~~l~~----~~~-~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~ 299 (461)
++++++++.++++. .++ ..||.+. +|+.+++.+++++|+++++|+||||||.+.|.+.. +.||||+|||
T Consensus 296 d~~lall~~~ll~~~~~~~~~~~~VV~tv-~sS~~le~ia~~~G~~v~~t~vG~k~I~~~m~~~~-----~~~GgEeSgg 369 (548)
T cd03085 296 SDSVAVIAANAKLIPYFYKGGLKGVARSM-PTSGALDRVAKKLGIPLFETPTGWKFFGNLMDAGK-----LSLCGEESFG 369 (548)
T ss_pred CHHHHHHHHHHHHhhhhhhcCCcEEEEeC-ccHHHHHHHHHHcCCcEEEcCchHHHHHHHHhcCC-----ceEEEeccCC
Confidence 99999999888752 123 3566555 55557788999999999999999999999998753 4799999999
Q ss_pred eeecCCccCCcHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCCccce-eeeeecccCCcccCCccchhhHHHHH
Q 012560 300 GALKENHWLDDGAYLMVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVE-LRLKIDQNHSDLKGGSFRDYGEAVLK 378 (461)
Q Consensus 300 ~~~~~~~~~~Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~ 378 (461)
+. +++.+.+||++++++++++|+..+ ++|++++++||+.|.... .+..... |+| +.++++|+
T Consensus 370 ~~-~~~~~~kDGi~aal~llella~~g--------~tLsell~~i~~~~G~~~~~~~~~~~-~~~-------~~k~~im~ 432 (548)
T cd03085 370 TG-SDHIREKDGLWAVLAWLSILAHRN--------VSVEDIVKEHWQKYGRNFYTRYDYEE-VDS-------EAANKMMD 432 (548)
T ss_pred cc-CCCccCCcHHHHHHHHHHHHHHHC--------cCHHHHHHHHHHHhCcceeecccccC-CCH-------HHHHHHHH
Confidence 86 888889999999999999887642 459999999997653222 2222221 787 56889999
Q ss_pred HHHhhh----cC----CCCCC--------------CCCcccCceEEEec-CeEEEEEecCCC---ceeEEEEeeCCHHHH
Q 012560 379 HLENRV----DS----DPKLQ--------------KAPVNYEGVRVSGS-GGWFLLRLSLHD---PVLPLNIEAPSREDA 432 (461)
Q Consensus 379 ~l~~~~----~~----~~~~~--------------~~~~~~dGlki~~~-~~w~liRpSgTe---P~irvy~Ea~~~~~a 432 (461)
+|.+.. .. ..+.+ ..+...||+|++++ ++|+++|||||| |++|+|+|+.+++-.
T Consensus 433 ~l~~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~~~~dglk~~~~~g~wi~iRpSGTE~~~Pkir~Y~E~~~~~~~ 512 (548)
T cd03085 433 HLRALVSDLPGVGKSGDKGYKVAKADDFSYTDPVDGSVSKKQGLRIIFEDGSRIIFRLSGTGSSGATIRLYIESYEKDPS 512 (548)
T ss_pred HHHhccccCccccccccCCceEEEEecceeccCCCCCcChhceEEEEECCCeEEEEECCCCCCCCceEEEEEEEecCChh
Confidence 997521 11 11111 01455799999975 679999999999 899999999886652
Q ss_pred HHHHHHHHHHhhcC--CCCCchHHHHHHh
Q 012560 433 VKLGLAVAAATKEF--PALDTSALDKFVQ 459 (461)
Q Consensus 433 ~~l~~~~~~~v~~~--~~~~~~~~~~~~~ 459 (461)
+ .-...+..++.+ +++++|+|.+|+-
T Consensus 513 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (548)
T cd03085 513 K-YGLDAQVALKPLIEIALKLSKLKEFTG 540 (548)
T ss_pred h-cccCHHHHHHHHHHHHHHHhChHHHhC
Confidence 2 111222223332 4788999999974
No 15
>PRK10887 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=2.4e-74 Score=593.74 Aligned_cols=386 Identities=27% Similarity=0.341 Sum_probs=315.1
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie 80 (461)
||++++++||+++|++|+++|.+|||+++|++. .++++|||||||||||++||||||++++|.++.++.++.+|
T Consensus 54 ~l~~a~~~gL~s~Gv~V~~~g~~pTP~~~~a~~------~~~~~gGI~ITaShnp~~~ngiK~~~~~G~~i~~~~~~~ie 127 (443)
T PRK10887 54 MLESALEAGLAAAGVDVLLTGPMPTPAVAYLTR------TLRAEAGIVISASHNPYYDNGIKFFSADGTKLPDEVELAIE 127 (443)
T ss_pred HHHHHHHHHHHHCCCeEEEECCcChHHHHHHHH------HcCCCEEEEEecCCCCcccCeEEEECCCCCCCCHHHHHHHH
Confidence 689999999999999999999999999999997 56889999999999999999999999999998888777776
Q ss_pred HHHhHHhhhhhcccccccccCCCcEEEE-cchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012560 81 RAADIYKQFMVEGLTNLEKQTSTSIKRV-DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (461)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~lg 159 (461)
+..+ +.+.+.. ....+.+... +..+.|++.+.+.++. . ++.+++|||+||+||+++.+++.+|++||
T Consensus 128 ~~~~--~~~~~~~-----~~~~g~~~~~~~~~~~Y~~~l~~~id~-~----i~~~~~kVvvD~~~G~~~~~~~~ll~~lG 195 (443)
T PRK10887 128 AELD--KPLTCVE-----SAELGKASRINDAAGRYIEFCKSTFPN-E----LSLRGLKIVVDCANGATYHIAPNVFRELG 195 (443)
T ss_pred HHHh--CcCCccc-----cccCceEEEcCChHHHHHHHHHHhcCc-c----cccCCCEEEEECCCchHHHHHHHHHHHhC
Confidence 6431 1111100 1123445554 5788899999888753 1 23579999999999999999999999999
Q ss_pred CCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012560 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (461)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~~l~~~ 239 (461)
|+++ .+|+.|||.||...|.| .+++.+.+.|++.++|+|+++||||||++++|++|+++++|++++|+++++++.+
T Consensus 196 ~~v~-~~n~~~dg~~~~~~~~~---~~l~~l~~~v~~~~adlGia~D~DgDRl~~vd~~G~~i~~d~l~~l~~~~ll~~~ 271 (443)
T PRK10887 196 AEVI-AIGCEPNGLNINDECGA---TDPEALQAAVLAEKADLGIAFDGDGDRVIMVDHLGNLVDGDQLLYIIARDRLRRG 271 (443)
T ss_pred CeEE-EEeccCCCCCCCCCCCC---CCHHHHHHHHHhcCCCeeeEECCCCceEEEECCCCcEeCHHHHHHHHHHHHHHhC
Confidence 9998 58999999998655555 4578899999999999999999999999999999999999999999999999875
Q ss_pred C-CCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecCCccCCcHHHHHHHH
Q 012560 240 P-GTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVKL 318 (461)
Q Consensus 240 ~-~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~l 318 (461)
+ ...||.+..|| .+++.+++++|+++++|||||+|++++|.+.+ .+||+|+|||++|+++++.+||+++++++
T Consensus 272 ~~~~~vv~~v~ss-~~~~~~a~~~g~~v~~t~vG~~~i~~~m~~~~-----~~~ggE~sg~~~~~~~~~~~Dgi~a~l~i 345 (443)
T PRK10887 272 QLRGGVVGTLMSN-MGLELALKQLGIPFVRAKVGDRYVLEKLQEKG-----WRLGGENSGHILCLDKTTTGDGIVAALQV 345 (443)
T ss_pred CCCCcEEEEeccc-hHHHHHHHHcCCcEEEcCCchHHHHHHHHhcC-----cEEEEecccceeccCccccCcHHHHHHHH
Confidence 4 34577565555 57778889999999999999999999998755 47999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHhhccCCCccceeeeeecccCCcccCCccchhhHHHHHHHHhhhcCCCCCCCCCcccC
Q 012560 319 LNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYE 398 (461)
Q Consensus 319 l~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~d 398 (461)
|++|+... ++|+++++++|.++.. +.+++ |+.... ...+++.|++..+.. +
T Consensus 346 le~la~~~--------~~Ls~l~~~~~~~~~~---~~~v~--~~~~~~---~~~~~~~~~~~~~~~-------------~ 396 (443)
T PRK10887 346 LAAMVRSG--------MSLADLCSGMKLFPQV---LINVR--FKPGAD---DPLESEAVKAALAEV-------------E 396 (443)
T ss_pred HHHHHHhC--------CCHHHHHhhcccccce---EEEEE--eccccc---cccchHHHHHHHHHH-------------H
Confidence 99987653 4599999999986432 23333 541000 022445565543321 1
Q ss_pred ceEEEecCeEEEEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhc
Q 012560 399 GVRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKE 445 (461)
Q Consensus 399 Glki~~~~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v~~ 445 (461)
+++ .++||+|||||+|||++|||+||.|++.+++|++.+.++|++
T Consensus 397 -~~~-~~dgWvLiRpS~tEP~iri~~Ea~s~e~a~~l~~~~~~~v~~ 441 (443)
T PRK10887 397 -AEL-GGRGRVLLRKSGTEPLIRVMVEGEDEAQVTALAERIADAVKA 441 (443)
T ss_pred -HHh-CCCeEEEEecCCCCeEEEEEEeeCCHHHHHHHHHHHHHHHHh
Confidence 111 257999999999999999999999999999999999999975
No 16
>PRK14317 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=2.7e-74 Score=596.31 Aligned_cols=389 Identities=25% Similarity=0.308 Sum_probs=315.3
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie 80 (461)
||++++++||+++|++|+++|.+|||+++|++. +++++|||||||||||++||||||++++|.++.++.++.+|
T Consensus 70 ~l~~a~~~gL~s~Gv~V~~~g~~pTP~~~~av~------~~~~~gGI~ITaSHnP~~~nGiK~~~~~G~~i~~~~~~~Ie 143 (465)
T PRK14317 70 MLAMALAAGLTAAGREVWHLGLCPTPAVAYLTR------KSEAIGGLMISASHNPPEDNGIKFFGADGTKLSPELQAQIE 143 (465)
T ss_pred HHHHHHHHHHHHCCCeEEEecccCcHHHHHHHH------hcCCCEEEEEeCCCCCcccCCEEEEcCCCCcCCHHHHHHHH
Confidence 689999999999999999999999999999987 56899999999999999999999999999998888777776
Q ss_pred HHHhHHhhhhhcccccccccCCCcEEE-EcchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012560 81 RAADIYKQFMVEGLTNLEKQTSTSIKR-VDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (461)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~lg 159 (461)
+.... +.++.......+.+.. .+..+.|++.+.+.++.. ++.+++|||+||+||+++.+++++|++||
T Consensus 144 ~~~~~------~~~~~~~~~~~g~~~~~~~~~~~Y~~~l~~~id~~-----i~~~~~kVvvD~~nG~~~~~~~~ll~~LG 212 (465)
T PRK14317 144 AGLRG------ELSSSDNASNWGRHYHRPELLDDYRDALLESLPDR-----VNLQGVKIVLDLAWGAAVACAPEVFKALG 212 (465)
T ss_pred HHHhc------ccccccchhcCCceEecCChHHHHHHHHHHhcCcc-----cccCCCEEEEECCCchHHHHHHHHHHHcC
Confidence 64321 1110000112244443 368899999998888532 24578999999999999999999999999
Q ss_pred CCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012560 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (461)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~~l~~~ 239 (461)
|+++ .+|+.|||.|++..|. +++++.+.+.|++.++|+|+++||||||++++|++|+++++|++++|+++++++..
T Consensus 213 ~~v~-~l~~~~dg~~~~~~~~---~~~l~~l~~~v~~~~adlGia~DgDgDR~~~vd~~G~~i~~d~l~~l~a~~ll~~~ 288 (465)
T PRK14317 213 AEVI-CLHDQPDGDRINVNCG---STHLEPLQAAVLEHGADMGFAFDGDADRVLAVDGQGRVVDGDHILYLWGSHLQEQN 288 (465)
T ss_pred CeEE-EEecccCCCCCCCCCc---hHhHHHHHHHHHhcCCCEEEEECCCCcEEEEECCCCCEEChhHHHHHHHHHHHHhc
Confidence 9998 5899999999744333 35689999999999999999999999999999999999999999999999998863
Q ss_pred --CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecCCccCCcHHHHHHH
Q 012560 240 --PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVK 317 (461)
Q Consensus 240 --~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ 317 (461)
++..||.++ +|+.+++.+++++|+++++||||++|++++|.+.+ ++||+|+|||++|+++++.+||++++++
T Consensus 289 ~~~~~~VV~~v-~ss~~~~~~~~~~g~~v~~t~vG~~~i~~~m~~~~-----~~~ggE~sg~~~~~~~~~~~Dgi~a~l~ 362 (465)
T PRK14317 289 QLPDNLLVATV-MSNLGFERAWQQRGGQLERTAVGDQHVHAAMLETG-----AMLGGEQSGHILCHHHGLSGDGLLTALH 362 (465)
T ss_pred CCCCCeEEEee-ecchHHHHHHHHcCCeEEEcCCchHHHHHHHHHcC-----cEeeccccceEEEeccccCCcHHHHHHH
Confidence 344577554 55557677889999999999999999999999865 4799999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcccHHHHHhhccCCCccceeeeeecc---cCCcccCCccchhhHHHHHHHHhhhcCCCCCCCCC
Q 012560 318 LLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQ---NHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAP 394 (461)
Q Consensus 318 ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~ 394 (461)
++++|+..+ ++|++++++++..|.....++.+.. .|+| +.++++++.+.+.
T Consensus 363 ile~la~~~--------~~lsel~~~~~~~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~i~~~----------- 416 (465)
T PRK14317 363 LATLVHQSG--------VSLAELVDQSFQTYPQKLRNVRVEDRDRRLNW-------QECEPLQQAIAQA----------- 416 (465)
T ss_pred HHHHHHHhC--------CCHHHHHHhHHHhCCceEEEeeccccchhhhh-------hcChhHHHHHHHH-----------
Confidence 999887643 4599999986443322222333321 1555 2346777765421
Q ss_pred cccCceEEEecCeEEEEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcCC
Q 012560 395 VNYEGVRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFP 447 (461)
Q Consensus 395 ~~~dGlki~~~~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v~~~~ 447 (461)
| +++ .++||+|||||||||+||||+||.|++.++++++.+.++|++++
T Consensus 417 ---~-~~~-~~~gW~liRpS~TEP~irv~~Ea~~~~~~~~l~~~~~~~v~~~~ 464 (465)
T PRK14317 417 ---E-AAM-GDTGRVLVRASGTEPLIRVMVEAEDAELVNHWTNHLVAVVQQHL 464 (465)
T ss_pred ---H-Hhh-cCCceEEEecCCCCCEEEEEEEeCCHHHHHHHHHHHHHHHHHHh
Confidence 1 111 25789999999999999999999999999999999999998764
No 17
>PRK14315 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=3e-74 Score=593.78 Aligned_cols=386 Identities=24% Similarity=0.272 Sum_probs=315.0
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie 80 (461)
||++++++||+++|++|+++|.+|||+++|++. +++++|||||||||||++||||||++++|.++.+..++.+|
T Consensus 57 ~l~~a~~~gL~s~G~~V~~~g~~pTP~~~~a~~------~~~~~gGi~ITaSHnP~~~nGiK~~~~~G~~i~~~~~~~ie 130 (448)
T PRK14315 57 MIENALVAGFTSVGMDVLLLGPIPTPAVAMLTR------SMRADLGVMISASHNPFEDNGIKLFGPDGFKLSDEIELEIE 130 (448)
T ss_pred HHHHHHHHHHHHCCCeEEEeCCcccHHHHHHHH------hcCCCEEEEEEcCCCCcccCCEEEECCCCCcCCHHHHHHHH
Confidence 689999999999999999999999999999987 56889999999999999999999999999988877776666
Q ss_pred HHHhHHhhhhhcccccccccCCCcEEEE-cchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012560 81 RAADIYKQFMVEGLTNLEKQTSTSIKRV-DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (461)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~lg 159 (461)
+..+ +.+.. +.......+.+... ++.+.|++++.+.++.+ ++.+++|||+||+||+++.+++.+|++||
T Consensus 131 ~~~~--~~~~~---~~~~~~~~g~~~~~~~~~~~Y~~~l~~~id~~-----i~~~~lkVvvD~~~G~~~~~~~~ll~~lG 200 (448)
T PRK14315 131 ALLD--GDLDK---RLAAPADIGRAKRIDDAHGRYIEFAKRTLPRD-----LRLDGLRVVVDCANGAAYKVAPEALWELG 200 (448)
T ss_pred HHHh--ccccc---cccccccCcceEEecchHHHHHHHHHHhcccc-----cccCCCEEEEECCCchHHHHHHHHHHHcC
Confidence 5432 11110 00001123556555 57899999999888632 34579999999999999999999999999
Q ss_pred CCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012560 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (461)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~~l~~~ 239 (461)
|+++ .+|+.|||.||...|.|+ +++.+.+.|++.+||+|+++||||||++++|++|+++++|++++|+++++++.+
T Consensus 201 ~~v~-~i~~~~dg~~~~~~~~~~---~l~~l~~~v~~~~adlGia~DgDgDR~~ivd~~G~~i~~d~~~~l~a~~ll~~~ 276 (448)
T PRK14315 201 AEVI-TIGVEPNGFNINEECGST---HPEALAKKVREVRADIGIALDGDADRVIIVDEKGHVVDGDQLMALIAESWAEDG 276 (448)
T ss_pred CeEE-EeccCCCCCCCCCCCCCC---CHHHHHHHHHHcCCCEEEEEcCCCceEEEEcCCCcEeCHHHHHHHHHHHHHHhC
Confidence 9988 589999999986555553 467899999999999999999999999999999999999999999999999865
Q ss_pred --CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecCCccCCcHHHHHHH
Q 012560 240 --PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVK 317 (461)
Q Consensus 240 --~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ 317 (461)
++..||.++.||. +++.+++++|+++++|||||+|++++|.+.+ ++||+|+|||++|+++++.+||++++++
T Consensus 277 ~~~~~~vV~~v~ss~-~i~~~a~~~g~~v~~t~vG~~~i~~~m~~~~-----~~~ggE~sg~~~f~~~~~~~Dgi~a~l~ 350 (448)
T PRK14315 277 RLRGGGIVATVMSNL-GLERFLADRGLTLERTAVGDRYVVEHMREGG-----FNLGGEQSGHIVLSDYATTGDGLVAALQ 350 (448)
T ss_pred CCCCCeEEEEecCCh-HHHHHHHHcCCeEEEeCChHHHHHHHHHhCC-----CceeecccccEeecccCCCCcHHHHHHH
Confidence 4456776666554 7788999999999999999999999998754 4799999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcccHHHHHhhccCCCccceeeeeecccCCcccCCccchhhHHHHHHHHhhhcCCCCCCCCCccc
Q 012560 318 LLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNY 397 (461)
Q Consensus 318 ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~ 397 (461)
+|++|+..+ ++|+++++++|.++... .+++ |+.- . . . . .+.+. ..+
T Consensus 351 lle~la~~~--------~~L~~l~~~~~~~~~~~---~~~~--~~~~--~-~-~-~---~~~~~-------------~~~ 396 (448)
T PRK14315 351 VLAVVVRSG--------RPASEVCRRFEPVPQLL---KNVR--YSGG--K-P-L-E---DASVK-------------SAI 396 (448)
T ss_pred HHHHHHHhC--------CCHHHHhhhcCcCCeee---eEEe--cCCc--c-c-C-C---CHHHH-------------HHH
Confidence 999987653 45999999999764322 2333 5420 0 0 0 0 01111 124
Q ss_pred CceEEEe-cCeEEEEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcC
Q 012560 398 EGVRVSG-SGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEF 446 (461)
Q Consensus 398 dGlki~~-~~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v~~~ 446 (461)
||+|+.. ++||+|||||||||+||||+||.|++.++++++.+.++|+..
T Consensus 397 ~~~~~~~~~~gWvLiRpS~teP~iri~~Ea~s~~~~~~l~~~~~~~i~~~ 446 (448)
T PRK14315 397 ADAEARLNGSGRLLIRPSGTEPLIRVMAEGDDRALVEEVVDEIVDAVSAA 446 (448)
T ss_pred HHHHHHhcCCcEEEEecCCCCcEEEEEEeeCCHHHHHHHHHHHHHHHHHh
Confidence 5666554 589999999999999999999999999999999999999753
No 18
>PRK14324 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=5.4e-74 Score=590.69 Aligned_cols=388 Identities=24% Similarity=0.295 Sum_probs=309.5
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie 80 (461)
||++|+++||+++|++|+++|.+|||+++|++. +++++|||||||||||++||||||++++|.++.++.++.+|
T Consensus 54 ~l~~a~~~gL~s~G~~V~~~g~~pTP~~~~a~~------~~~~~gGI~ITaSHNP~~~nGiK~~~~~G~~i~~~~~~~Ie 127 (446)
T PRK14324 54 MIENALVSGLTSVGYNVIQIGPMPTPAIAFLTE------DMRCDAGIMISASHNPYYDNGIKFFDSYGNKLDEEEEKEIE 127 (446)
T ss_pred HHHHHHHHHHHHCCCeEEEecCccHHHHHHHHh------hcCCceEEEEEcCCCChhHCCEEEECCCCCCCCHHHHHHHH
Confidence 689999999999999999999999999999997 56889999999999999999999999999998888776666
Q ss_pred HHHhHHhhhhhcccccccccCCCcEEEE-cchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012560 81 RAADIYKQFMVEGLTNLEKQTSTSIKRV-DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (461)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~lg 159 (461)
+..... .+... +.......+.+... ++.+.|++++.+.++.+ ...+++|||+||+||+++.+++.+|++||
T Consensus 128 ~~~~~~-~~~~~--~~~~~~~~g~~~~~~~~~~~Y~~~l~~~i~~~-----~~~~~lkVvvD~~nGa~~~~~~~ll~~lG 199 (446)
T PRK14324 128 EIFFDE-ELIQS--SQKTGEEIGSAKRIDDVIGRYIVHIKNSFPKD-----LTLKGLRIVLDTANGAAYKVAPTVFSELG 199 (446)
T ss_pred HHHhcc-ccccc--cccchhhCeeeEecccHHHHHHHHHHHhcCCc-----cCCCCCEEEEECCCchHHHHHHHHHHHcC
Confidence 543211 11000 00001123455545 57889999998887532 12468999999999999999999999999
Q ss_pred CCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012560 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (461)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~~l~~~ 239 (461)
|+++ .+|+.|||.||++.|+|..+ +.+.+.|++.++|+|+++||||||++++|++|+++++|++++|+++++++.+
T Consensus 200 ~~v~-~i~~~~dg~~~~~~~~~~~~---e~l~~~v~~~~adlGia~DgDgDR~~vvd~~G~~l~~d~~~~l~a~~ll~~~ 275 (446)
T PRK14324 200 ADVI-VINDEPNGFNINENCGALHP---ENLAQEVKRYRADIGFAFDGDADRLVVVDEKGEIVHGDKLLGVLAVYLKEKG 275 (446)
T ss_pred CeEE-EECCCCCCCCCCCCCCCCCH---HHHHHHHHhCCCCEEEEECCCCceEEEECCCCCEeCHHHHHHHHHHHHHHhC
Confidence 9998 58999999999777766554 4678899999999999999999999999999999999999999999998875
Q ss_pred --CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecCCccCCcHHHHHHH
Q 012560 240 --PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVK 317 (461)
Q Consensus 240 --~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ 317 (461)
++..||.++.||. +++.+++++|+++++|||||+||+++|.+.+ .+||||+|||++|+++.+.+||++++++
T Consensus 276 ~~~~~~VV~~v~ss~-~l~~ia~~~g~~v~~t~vG~~~i~~~m~~~~-----~~~ggE~sG~~~~~~~~~~~Dgi~a~l~ 349 (446)
T PRK14324 276 ALKSQAIVATVMSNL-ALEEYLKKHGIELKRCNVGDKYVLECMKENG-----INFGGEQSGHIIFSDYAKTGDGLVSALQ 349 (446)
T ss_pred CCCCCeEEEEecCCh-HHHHHHHHcCCeEEEeCChHHHHHHHHHhcC-----CEEEEcCcccEEecCcCCCCcHHHHHHH
Confidence 3446776665555 6678889999999999999999999998865 4799999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcccHHHHHhhccCCCccceeeeeecccCCcccCCccchhhHHHHHHHHhhhcCCCCCCCCCccc
Q 012560 318 LLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNY 397 (461)
Q Consensus 318 ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~ 397 (461)
+|+.|+... ++|+++++++|.+... ..+..+. .+. .+ ..++.+.+.. ...
T Consensus 350 lle~la~~~--------~~ls~l~~~~~~~~~~-~~~~~~~--~~~----~~-----~~~~~~~~~~----------~~~ 399 (446)
T PRK14324 350 VSALMLESK--------KKASEALNPFELYPQL-LVNLKVQ--EKK----PL-----EKIKGLKELL----------KEL 399 (446)
T ss_pred HHHHHHHcC--------CCHHHHHHhhhhcCce-eEEEeeC--Ccc----cc-----ccCHHHHHHH----------HHH
Confidence 999988643 4599999999975322 2233332 111 00 0111221100 011
Q ss_pred CceEEEecCeEEEEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcCC
Q 012560 398 EGVRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFP 447 (461)
Q Consensus 398 dGlki~~~~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v~~~~ 447 (461)
| .+++|+|||||||||++|||+||.|++.++++++.+.+.|++++
T Consensus 400 ~-----~dg~~~lvR~SgTEp~irv~~Ea~~~~~~~~l~~~~~~~~~~~~ 444 (446)
T PRK14324 400 E-----KLGIRHLIRYSGTENKLRILLEGKDEKLLEKKMQELVEFFKKAL 444 (446)
T ss_pred h-----cCCcEEEEecCCCCceEEEEEEECCHHHHHHHHHHHHHHHHHHh
Confidence 1 33469999999999999999999999999999999999998754
No 19
>TIGR01455 glmM phosphoglucosamine mutase. This model describes GlmM, phosphoglucosamine mutase, also designated in MrsA and YhbF E. coli, UreC in Helicobacter pylori, and femR315 or FemD in Staphlococcus aureus. It converts glucosamine-6-phosphate to glucosamine-1-phosphate as part of the pathway toward UDP-N-acetylglucosamine for peptidoglycan and lipopolysaccharides.
Probab=100.00 E-value=1.7e-73 Score=587.72 Aligned_cols=382 Identities=28% Similarity=0.351 Sum_probs=309.2
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie 80 (461)
||++++++||+++|++|+++|.+|||+++|++. +++++|||||||||||++||||||++++|.++.++.++.++
T Consensus 53 ~l~~a~~~gL~s~G~~V~~~g~~pTP~~~~av~------~~~~~gGI~iTaSHnP~~~nGiK~~~~~G~~i~~~~~~~I~ 126 (443)
T TIGR01455 53 MLENALAAGLNSAGVDVLLLGPLPTPAVAYLTR------TLRADAGVMISASHNPYEDNGIKFFGPGGFKLDDATEAAIE 126 (443)
T ss_pred HHHHHHHHHHHHCCCeEEEeCCcCcHHHHHHHH------hcCCCeEEEEecCCCCcccCcEEEecCCCCcCCHHHHHHHH
Confidence 689999999999999999999999999999997 56899999999999999999999999999998887676666
Q ss_pred HHHhHHhhhhhcccccccccCCCcEEEE-cchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012560 81 RAADIYKQFMVEGLTNLEKQTSTSIKRV-DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (461)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~lg 159 (461)
+.......+.+.. ....+.+... ++.+.|++++.+.++. .++.+++|||+||+||+++.+++.+|++||
T Consensus 127 ~~~~~~~~~~~~~-----~~~~g~~~~~~~~~~~Y~~~l~~~i~~-----~~~~~~lkVvvD~~~G~~~~~~~~ll~~lg 196 (443)
T TIGR01455 127 ALLDEADPLPRPE-----SEGLGRVKRYPDAVGRYIEFLKSTLPR-----GLTLSGLKVVLDCANGAAYKVAPHVFRELG 196 (443)
T ss_pred HHHhcCccccCCC-----ccCceEEEEcccHHHHHHHHHHHHhhc-----ccccCCCEEEEECCCchHHHHHHHHHHHcC
Confidence 5432110011100 1122445444 5788999999888762 134578999999999999999999999999
Q ss_pred CCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012560 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (461)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~~l~~~ 239 (461)
|+++ .+|+.+||.||...|.| ++++.+.+.|++.++|+|+++||||||++++|++|+++++|++++|+++++++.+
T Consensus 197 ~~v~-~in~~~d~~~~~~~~~~---~~l~~l~~~v~~~~adlGia~DgD~DR~~~vd~~G~~l~~d~~~al~a~~ll~~~ 272 (443)
T TIGR01455 197 AEVI-AIGVEPDGLNINDGCGS---THLDALQKAVREHGADLGIAFDGDADRVLAVDANGRIVDGDQILYIIARALKESG 272 (443)
T ss_pred CEEE-EEccCCCCCCCCCCCCC---CCHHHHHHHHhhcCCCEEEEEcCCCceEEEECCCCcEeCHHHHHHHHHHHHHHhc
Confidence 9988 68999999998655544 4578899999999999999999999999999999999999999999999998863
Q ss_pred --CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecCCccCCcHHHHHHH
Q 012560 240 --PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVK 317 (461)
Q Consensus 240 --~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ 317 (461)
++..||.++.||. +++.+++++|+++++||||++|++++|.+.+ .+||||+|||++|+++++.+||++++++
T Consensus 273 ~~~~~~vv~~v~ss~-~l~~~a~~~g~~v~~t~vG~~~i~~~m~~~~-----~~~ggE~sG~~~~~~~~~~~Dgi~a~l~ 346 (443)
T TIGR01455 273 ELAGNTVVATVMSNL-GLERALEKLGLTLIRTAVGDRYVLEEMRESG-----YNLGGEQSGHIILLDYSTTGDGIVSALQ 346 (443)
T ss_pred CCCCCcEEEEccCCH-HHHHHHHHcCCeEEEeCChHHHHHHHHHhcC-----CEEEEcCcceEEecCCCcCCcHHHHHHH
Confidence 3446776666554 6677889999999999999999999998755 4799999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcccHHHHHhhccCCCccceeeeeecccCCcccCCccchhhHHH-----HHHHHhhhcCCCCCCC
Q 012560 318 LLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAV-----LKHLENRVDSDPKLQK 392 (461)
Q Consensus 318 ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-----~~~l~~~~~~~~~~~~ 392 (461)
++++|+... ++|+++++++|.++ ..... |+|.. .++++ |+...+..
T Consensus 347 ile~la~~~--------~~l~~l~~~~~~~~-~~~~~------~~~~~------~~~~~~~~~~~~~~~~~~-------- 397 (443)
T TIGR01455 347 VLTIMKKSG--------STLSELAAEFVPYP-QTLVN------VRVAD------RKLAAAEAPAVKAAIEDA-------- 397 (443)
T ss_pred HHHHHHHhC--------CCHHHHHhhccccC-eeeee------EEecc------cccccccCHHHHHHHHHH--------
Confidence 999887643 45999999999765 22222 44411 01111 33322211
Q ss_pred CCcccCceEEEecCeEEEEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHhh
Q 012560 393 APVNYEGVRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATK 444 (461)
Q Consensus 393 ~~~~~dGlki~~~~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v~ 444 (461)
+ .++ .++||+|||||||||+||||+||+|++.++++++.+.++|+
T Consensus 398 -----~-~~~-~~~gW~LiRpS~teP~irv~~Ea~~~e~~~~l~~~~~~~v~ 442 (443)
T TIGR01455 398 -----E-AEL-GGTGRILLRPSGTEPLIRVMVEAADEELVQQLADTLADVVS 442 (443)
T ss_pred -----H-HHh-CCCcEEEEecCCCCceEEEEEEECCHHHHHHHHHHHHHHHh
Confidence 1 122 25789999999999999999999999999999999999885
No 20
>cd05799 PGM2 This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and deoxyribose-1-phosphate to the corresponding 5-phosphopentoses. PGM2L1 is thought to catalyze the 1,3-bisphosphoglycerate-dependent synthesis of glucose 1,6-bisphosphate and other aldose-bisphosphates that serve as cofactors for several sugar phosphomutases and possibly also as regulators of glycolytic enzymes. PGM2 and PGM2L1 belong to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/ph
Probab=100.00 E-value=4.9e-73 Score=591.42 Aligned_cols=390 Identities=24% Similarity=0.250 Sum_probs=315.0
Q ss_pred CHHHHHHHHHHhCCCcEEEeC-CCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQYG-LASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDIL 79 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~g-~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~i 79 (461)
||++++++||+++|++|+++| .+|||+++|++. +++++|||||||||||++||||||++++|.++.++.++.+
T Consensus 60 ~~~~a~~~gL~s~Gi~V~~~g~~~ptP~~~~~i~------~~~~~gGI~iTaSHnp~~~nGiK~~~~~G~~~~~~~~~~I 133 (487)
T cd05799 60 EFAELTAAVLAANGIKVYLFDDLRPTPLLSFAVR------HLGADAGIMITASHNPKEYNGYKVYWEDGAQIIPPHDAEI 133 (487)
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCCCCcHHHHHHH------HhCCCeeEEEEeeCCCcccCCEEEecCCCCcCCCHHHHHH
Confidence 689999999999999999999 999999999997 5688999999999999999999999999998888777777
Q ss_pred HHHHhHHhhhhhcccccccccCCCcEEEE--cchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhh
Q 012560 80 ERAADIYKQFMVEGLTNLEKQTSTSIKRV--DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEP 157 (461)
Q Consensus 80 e~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~ 157 (461)
|+.....+.+.+..+ ......+.+..+ +..+.|++.+.+.++...+ ++.+++|||+||+||+++.+++.+|++
T Consensus 134 e~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~Y~~~l~~~i~~~~~---~~~~~~kVvvD~~~G~~~~~~~~il~~ 208 (487)
T cd05799 134 AEEIEAVLEPLDIKF--EEALDSGLIKYIGEEIDDAYLEAVKKLLVNPEL---NEGKDLKIVYTPLHGVGGKFVPRALKE 208 (487)
T ss_pred HHHHHhcccccccch--hhhccCCceEEcchHHHHHHHHHHHhhhccccc---ccCCCCcEEEeCCCCccHHHHHHHHHH
Confidence 764322111111000 001233555543 5789999999998864221 145789999999999999999999999
Q ss_pred cCCC-cc-cceecCCCCCCCC-CCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcC----CCccccchhHHHH
Q 012560 158 LGAK-TS-GSQFLEPDGMFPN-HIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDS----TGHELNRNRLIAL 230 (461)
Q Consensus 158 lg~~-v~-~~~~~~~d~~f~~-~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~----~G~~l~~d~~~~L 230 (461)
|||+ ++ ..+++.|||.||+ +.|+|+.+++|+.+.+.|++.++|+|+++||||||++++|+ +|+++++|++++|
T Consensus 209 LG~~~v~~~~~~~~~d~~F~~~~~p~p~~~~~l~~l~~~v~~~~ad~Gia~D~DgDR~~vvd~~~~~~g~~~~~d~l~aL 288 (487)
T cd05799 209 AGFTNVIVVEEQAEPDPDFPTVKFPNPEEPGALDLAIELAKKVGADLILATDPDADRLGVAVKDKDGEWRLLTGNEIGAL 288 (487)
T ss_pred cCCCCcEEeeeccCCCcCCCCCCCCCCCCHHHHHHHHHHHHHhCCCEEEEeCCCCCeEEEEEEcCCCCEEEECHHHHHHH
Confidence 9999 42 2578999999998 68999988999999999999999999999999999999994 4899999999999
Q ss_pred HHHHHHHhC-------CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeec
Q 012560 231 MSAIVLEEH-------PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALK 303 (461)
Q Consensus 231 ~~~~~l~~~-------~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~ 303 (461)
+++++++.+ ++..||.+ ++|+.+++.+++++|++++||||||+|++++|.+....+.+++||||+|||++|+
T Consensus 289 ~a~~ll~~~~~~~~~~~~~~vV~~-v~sS~~i~~ia~~~g~~v~~t~~G~~~i~~~m~~~~~~~~~~~~ggE~sgg~~~~ 367 (487)
T cd05799 289 LADYLLEQRKEKGKLPKNPVIVKT-IVSSELLRKIAKKYGVKVEETLTGFKWIGNKIEELESGGKKFLFGFEESIGYLVG 367 (487)
T ss_pred HHHHHHHhHhhccCCCCCcEEEEe-ehhHHHHHHHHHHcCCeEEECCCCchHHHHHHHHHhccCceEEEEEeccceeeeC
Confidence 999998875 33347655 4555677889999999999999999999999998654444578999999999999
Q ss_pred CCccCCcHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCCcc-ceeeeeecccC---CcccCCccchhhHHHHHH
Q 012560 304 ENHWLDDGAYLMVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPGFA-VELRLKIDQNH---SDLKGGSFRDYGEAVLKH 379 (461)
Q Consensus 304 ~~~~~~Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~v~~~ 379 (461)
++.+.+||++++++++++|+.... ++ ++|+++++++|.+|.. ...+..++ | +| ....+++|++
T Consensus 368 ~~~~~~Dgi~a~~~lle~la~~~~-~~----~~Ls~l~~~l~~~y~~~~~~~~~i~--~~~~~~------~~~~~~v~~~ 434 (487)
T cd05799 368 PFVRDKDGISAAALLAEMAAYLKA-QG----KTLLDRLDELYEKYGYYKEKTISIT--FEGKEG------PEKIKAIMDR 434 (487)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHH-cC----CCHHHHHHHHHHHhCceEEeeeeEE--EeCCCC------HHHHHHHHHH
Confidence 999999999999999998875322 23 4599999999986532 22223344 6 45 1222678877
Q ss_pred HHhhhcCCCCCCCCCcccCceEEEecC-eEEEEEecCCCceeEEEEeeCC
Q 012560 380 LENRVDSDPKLQKAPVNYEGVRVSGSG-GWFLLRLSLHDPVLPLNIEAPS 428 (461)
Q Consensus 380 l~~~~~~~~~~~~~~~~~dGlki~~~~-~w~liRpSgTeP~irvy~Ea~~ 428 (461)
|.+. . ||+|+.++| +|+|||||||||++|||+|+.+
T Consensus 435 l~~~----------~---DGvki~~~dg~WvliRpS~teP~~riy~Ea~~ 471 (487)
T cd05799 435 LRNN----------P---NVLTFYLEDGSRVTVRPSGTEPKIKFYIEVVG 471 (487)
T ss_pred Hhcc----------C---CEEEEEEcCCEEEEEEcCCCCceEEEEEEeec
Confidence 7531 1 999999866 7999999999999999999988
No 21
>PRK14316 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=1.4e-73 Score=589.58 Aligned_cols=388 Identities=24% Similarity=0.330 Sum_probs=311.7
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie 80 (461)
||++++++||+++|++|+++|.+|||+++|++. +++++|||||||||||++||||||++++|.+++++.++.+|
T Consensus 55 ~l~~a~~~gL~s~G~~V~~~g~~pTP~~~~av~------~~~~~gGi~ITaSHnp~~~nGiK~~~~~G~~i~~~~~~~Ie 128 (448)
T PRK14316 55 MLESALIAGLLSVGAEVMRLGVIPTPGVAYLTR------ALGADAGVMISASHNPVEDNGIKFFGSDGFKLSDEQEDEIE 128 (448)
T ss_pred HHHHHHHHHHHHCCCEEEEecccchHHHHHHHH------HhcCcEEEEEEecCCChhhCcEEEEcCCCCcCCHHHHHHHH
Confidence 689999999999999999999999999999997 56889999999999999999999999999988887777666
Q ss_pred HHHhHHhhhhhcccccccccCCCcEEEE-cchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012560 81 RAADIYKQFMVEGLTNLEKQTSTSIKRV-DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (461)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~lg 159 (461)
+..... .++++.......+.+... +..+.|++.+.+.++. ..+++|||+||+||+++.+++++|++||
T Consensus 129 ~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~Y~~~l~~~i~~-------~~~~lkvvvD~~nG~~~~~~~~ll~~lg 197 (448)
T PRK14316 129 ALLDAE----EDTLPRPSGEGLGTVSDYPEGLRKYLQFLKSTIDE-------DLSGLKVALDCANGATSSLAPRLFADLG 197 (448)
T ss_pred HHHhcc----ccccccCccccceeEEEeCcHHHHHHHHHHHhcCc-------ccCCCEEEEECCCchhhHHHHHHHHHcC
Confidence 543210 011110000112334444 5678899999888742 1368999999999999999999999999
Q ss_pred CCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012560 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (461)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~~l~~~ 239 (461)
|+++ .+|+.|||.||+..|.|+.+ +.+.+.|++.++|+|+++||||||++++|++|+++++|++++|+++++++.+
T Consensus 198 ~~v~-~in~~~dg~~~~~~~~~~~~---~~l~~~v~~~~adlGia~DgDaDR~~~vd~~G~~i~~d~~~~l~a~~ll~~~ 273 (448)
T PRK14316 198 ADVT-VIGTSPDGLNINDGVGSTHP---EALQELVVEKGADLGLAFDGDADRLIAVDENGNIVDGDKIMFICGKYLKEKG 273 (448)
T ss_pred CeEE-EEccCCCCCCCCCCCCCCCH---HHHHHHHhhcCCCEEEEEcCCCceEEEECCCCCEeCHHHHHHHHHHHHHHhC
Confidence 9998 58999999999877776554 5688999999999999999999999999999999999999999999998875
Q ss_pred --CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecCCccCCcHHHHHHH
Q 012560 240 --PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVK 317 (461)
Q Consensus 240 --~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ 317 (461)
++..||.+. +|+.+++.+++++|+++++||||++|++++|.+.+ ++||||+|||++|+++.+.+||++++++
T Consensus 274 ~~~~~~vv~~v-~ss~~~~~~~~~~g~~v~~~~vG~~~i~~~m~~~~-----~~~ggE~sG~~~f~~~~~~~Dgi~a~l~ 347 (448)
T PRK14316 274 RLKKNTIVTTV-MSNLGFYKALEEEGINSVKTKVGDRYVVEEMRKGG-----YNLGGEQSGHIIFLDYNTTGDGLLTALQ 347 (448)
T ss_pred CCCCCeEEEec-cCchHHHHHHHHcCCeEEEeCChHHHHHHHHHhcC-----CeEEEcCcccEEecccCCCCcHHHHHHH
Confidence 344677554 55557777888899999999999999999998765 4699999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcccHHHHHhhccCCCccceeeeeecccCCcccCCccchhhHHHHH--HHHhhhcCCCCCCCCCc
Q 012560 318 LLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLK--HLENRVDSDPKLQKAPV 395 (461)
Q Consensus 318 ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~l~~~~~~~~~~~~~~~ 395 (461)
+++.|+..+ ++|+++++++|.+.... ....+. . ++++|+ ++.+
T Consensus 348 ile~l~~~~--------~~ls~l~~~~~~~p~~~-~~~~v~--~-----------k~~~~~~~~~~~------------- 392 (448)
T PRK14316 348 LAKVMKETG--------KKLSELAAEMKKYPQKL-VNVRVT--D-----------KKKAMENPEIKE------------- 392 (448)
T ss_pred HHHHHHHhC--------CCHHHHHhhhhhcCcce-EEeEeC--C-----------ccccccCHHHHH-------------
Confidence 999887643 45999999986432111 122221 1 122322 1111
Q ss_pred ccCceEEEe-cCeEEEEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcCCCCC
Q 012560 396 NYEGVRVSG-SGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFPALD 450 (461)
Q Consensus 396 ~~dGlki~~-~~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v~~~~~~~ 450 (461)
.++++++.. ++||+|||||||||++|||+||.|++.++++++.+.++|++.+.+|
T Consensus 393 ~i~~i~~~~~~~gw~liRpS~TEP~irvy~Ea~~~e~~~~l~~~~~~~i~~~~~~~ 448 (448)
T PRK14316 393 IIEKVEEEMAGNGRVLVRPSGTEPLVRVMAEAPTQEEVDKYVDRIADVVEAEMGLD 448 (448)
T ss_pred HHHHHHHHhCCCceEEEecCCCCcEEEEEEEeCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 133444432 5789999999999999999999999999999999999999987764
No 22
>PRK14323 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=4.1e-73 Score=584.46 Aligned_cols=379 Identities=24% Similarity=0.309 Sum_probs=305.0
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie 80 (461)
||++|+++||+++|++|+++|.+|||+++|++. +++++|||||||||||++||||||++++|.+++++.++.+|
T Consensus 57 ~l~~a~~~gL~s~G~~V~~~g~~pTP~~~~av~------~~~~~gGI~ITaSHnP~~~nGiK~~~~~G~~i~~~~~~~ie 130 (440)
T PRK14323 57 MLEAALAAGLTSRGVRVEHLGVLPTPGVSYLTR------HLGATAGVVISASHNPYQDNGIKFFGADGEKLPDAAELEIE 130 (440)
T ss_pred HHHHHHHHHHHHCCCEEEEecccChHHHHHHHH------HhCCCEEEEEecCCCCCccCCEEEeCCCCCcCCHHHHHHHH
Confidence 689999999999999999999999999999997 56889999999999999999999999999988877666666
Q ss_pred HHHhHHhhhhhcccccccccCCCcEEEE-cchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012560 81 RAADIYKQFMVEGLTNLEKQTSTSIKRV-DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (461)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~lg 159 (461)
+..... ++++.......+.+... +..+.|++.+.+.++ ..+++|||+||+||+++.+++++|++||
T Consensus 131 ~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~Y~~~l~~~~~--------~~~~~kVvvD~~~G~~~~~~~~ll~~lG 197 (440)
T PRK14323 131 ALLDEV-----PELAEVTGAGIGSVSDFTEAERLYLDFLLSHAP--------DLSGLKVALDCANGAAYRLAPKVFQAAG 197 (440)
T ss_pred HHHhcc-----cccCcccccCceeEEEhhhHHHHHHHHHHHhcc--------cccCCEEEEECCCchHHHHHHHHHHHcC
Confidence 543210 11110001123445544 577888888876653 1368999999999999999999999999
Q ss_pred CCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012560 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (461)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~~l~~~ 239 (461)
|+++ .+|+.|||.||+..|.| ++++.+.+.|++.++|+|+++||||||++++|++|+++++|++++|++.+. .
T Consensus 198 ~~v~-~l~~~~dg~~~~~~~~~---~~l~~l~~~v~~~~adlGia~DgD~DR~~~vD~~G~~i~~d~~~~l~a~~~---~ 270 (440)
T PRK14323 198 ADVF-ALFNTPDGRNINRGCGS---THPEALQRFVVEGGLDLGVAFDGDADRALFVDRRGRLFHGDHMLYLNALAR---G 270 (440)
T ss_pred CcEE-EEeccCCCCcCCCCCCC---CCHHHHHHHHhccCCCEEEEeCCCcceeEEECCCCcEeCHHHHHHHHHHHh---c
Confidence 9998 58999999998665554 456789999999999999999999999999999999999999999999764 1
Q ss_pred CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecCCccCCcHHHHHHHHH
Q 012560 240 PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVKLL 319 (461)
Q Consensus 240 ~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ll 319 (461)
+ ..||.+..||. +++.+++++|+++++||||+++++++|.+.+ ++||||+|||++|+++.+.+||++++++++
T Consensus 271 ~-~~vV~~v~ss~-~~~~~~~~~g~~v~~t~vG~~~i~~~m~~~~-----~~~ggE~sG~~~f~~~~~~~Dgi~a~l~~l 343 (440)
T PRK14323 271 E-KAVVGTVMSNM-ALEVKLREAGIAFHRTAVGDRYVHEKLHAKG-----LTLGGEQSGHVLFLDHAPTGDGVLTALLTL 343 (440)
T ss_pred C-CcEEEEeCCCh-HHHHHHHHcCCeEEEeCChHHHHHHHHHhcC-----CeEEEcCcccEEeCCCCCCCcHHHHHHHHH
Confidence 2 35776666665 6677888899999999999999999998765 479999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCcccHHHHHhhccCCCccceeeeeecccCCcccCCccchhhHHHHHH--HHhhhcCCCCCCCCCccc
Q 012560 320 NKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKH--LENRVDSDPKLQKAPVNY 397 (461)
Q Consensus 320 ~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--l~~~~~~~~~~~~~~~~~ 397 (461)
++|+..+ ++|+++++++|.++... .+++ |+. ++++|+. +.+. +..+
T Consensus 344 e~la~~~--------~~ls~l~~~~~~~~~~~---~~v~--~~~---------k~~~~~~~~~~~~----------i~~~ 391 (440)
T PRK14323 344 AAMKALG--------TDLDAWYDALPMYPQTL---LNVR--VSD---------KAKVAADPRVQEA----------VREA 391 (440)
T ss_pred HHHHHhC--------CCHHHHHHhhhhcCcee---EEEE--eCC---------ccchhcCHHHHHH----------HHHH
Confidence 9987653 45999999999864322 2333 432 2344433 1110 1111
Q ss_pred CceEEEecCeEEEEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcC
Q 012560 398 EGVRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEF 446 (461)
Q Consensus 398 dGlki~~~~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v~~~ 446 (461)
+ ++++ ++||+|||||||||++|||+||.|++.++++++++.++|+++
T Consensus 392 ~-~~~~-~~gW~LvRpS~TEP~irv~~Ea~s~~~~~~l~~~~~~~v~~~ 438 (440)
T PRK14323 392 E-ARLG-GRGRVNLRPSGTEPLVRVMVEGPDEAEIEEVARELAGVVERL 438 (440)
T ss_pred H-hhcC-CCeEEEEecCCCccEeEEEEeeCCHHHHHHHHHHHHHHHHHh
Confidence 2 2222 578999999999999999999999999999999999999865
No 23
>PRK14314 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=1.1e-72 Score=582.45 Aligned_cols=387 Identities=26% Similarity=0.332 Sum_probs=312.7
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie 80 (461)
||++++++||+++|++|+++|.+|||+++|++. +++++|||||||||||++||||||++++|.+++++.++.++
T Consensus 57 ~l~~a~~~gL~s~Gv~V~~~g~~ptP~~~~a~~------~~~~~gGI~iTaShnp~~~ngiK~~~~~G~~~~~~~~~~Ie 130 (450)
T PRK14314 57 MFENALIAGLCSMGVDVLLVGPLPTPGIAFITR------SMRADAGVVISASHNPYQDNGIKFFSSDGFKLPDEVELRIE 130 (450)
T ss_pred HHHHHHHHHHHHCCCeEEEecccCCHHHHHHHH------hcCCCEEEEEEeCCCCcccccEEEECCCCCCCCHHHHHHHH
Confidence 689999999999999999999999999999997 56889999999999999999999999999998888777776
Q ss_pred HHHhHHhhhhhcccc--cccccCCCcEEEE-cchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhh
Q 012560 81 RAADIYKQFMVEGLT--NLEKQTSTSIKRV-DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEP 157 (461)
Q Consensus 81 ~~~~~~~~~~~~~~~--~~~~~~~~~i~~~-~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~ 157 (461)
.... .++++ .......+.+... +..+.|++++.+.++. . ++.+++|||+||+||+++.+++++|++
T Consensus 131 ~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~Y~~~l~~~id~-~----i~~~~~kVvvD~~~Ga~~~~~~~il~~ 199 (450)
T PRK14314 131 AMVL------SKDFDWLLPDAHAVGKAKRIDDAPGRYIVFLKATFPK-G----LTLKGLKIVLDCANGAAYKVAPAVFEE 199 (450)
T ss_pred HHHh------cCCccccccchhcCceEEEeCchHHHHHHHHHHhhcc-c----cCCCCCEEEEECCCchHHHHHHHHHHH
Confidence 5432 11111 0001122444444 6788999999988762 1 235689999999999999999999999
Q ss_pred cCCCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHH
Q 012560 158 LGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLE 237 (461)
Q Consensus 158 lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~~l~ 237 (461)
|||+++ .+|++|||.||++.|.|+. ++.+.+.|++.++|+|+++||||||++++|++|+++++|++++|+++++++
T Consensus 200 lg~~v~-~~~~~~dg~~~~~~~~~~~---~~~l~~~v~~~~adlGia~DgDgDR~~~vd~~G~~i~~d~~~al~~~~ll~ 275 (450)
T PRK14314 200 LGAEVI-CIGVEPNGLNINAGCGSLH---PEVIAKAVIEHGADLGIALDGDADRLIVVDEKGHIVDGDQIMAICATDLKK 275 (450)
T ss_pred cCCeEE-EeccCCCCCCCCCCCCCCC---HHHHHHHHHhcCCCeEEEEcCCCceEEEECCCCcCcCHHHHHHHHHHHHHH
Confidence 999998 5899999999877666654 457889999999999999999999999999999999999999999999998
Q ss_pred hC--CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecCCccCCcHHHHH
Q 012560 238 EH--PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLM 315 (461)
Q Consensus 238 ~~--~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa 315 (461)
.+ ++..||.++. |+.+++.+++++|+++++||||++|++++|.+.+ ++||+|+|||++|+++++.+||++++
T Consensus 276 ~~~~~~~~vv~~v~-ss~~~~~ia~~~g~~v~~t~vG~~~i~~~m~~~~-----~~~ggE~sg~~~~~~~~~~~Dgi~a~ 349 (450)
T PRK14314 276 RGALPKNTLVATVM-SNMGLEVAMKELGGQVLRTPVGDRYVVEEMRRGG-----ANLGGEQSGHLIFLDHNTTGDGILSA 349 (450)
T ss_pred hcCCCCCEEEEecc-CChHHHHHHHHcCCEEEEeCChHHHHHHHHHhcC-----CEEEEeCcccEEEeCCCCCCcHHHHH
Confidence 73 3445776655 5557788889999999999999999999999765 47999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCcccHHHHHhhccCCCccceeeeeecccCCcccCCccchhhHHHHHHHHhhhcCCCCCCCCCc
Q 012560 316 VKLLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPV 395 (461)
Q Consensus 316 ~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~ 395 (461)
++++++|+..+ ++|+++++++|.+... ... |+|..-..+ ..++++.+
T Consensus 350 l~~le~la~~~--------~~Ls~l~~~~~~~p~~-~~~------~~~~~k~~~-----~~~~~~~~------------- 396 (450)
T PRK14314 350 LQVLRIMIESG--------KPLSELAGLLEPFPQA-LIN------VRVKEKIPL-----ETLPEVAK------------- 396 (450)
T ss_pred HHHHHHHHHhC--------CCHHHHHhhhhhcCcc-ceE------eEeCCcCcc-----ccHHHHHH-------------
Confidence 99999988653 4599999976643211 112 554110001 11222221
Q ss_pred ccCceEEEe-cCeEEEEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcCC
Q 012560 396 NYEGVRVSG-SGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFP 447 (461)
Q Consensus 396 ~~dGlki~~-~~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v~~~~ 447 (461)
.+||+++.. ++||+|||||+|||+||||+||.|++.++++++.+.++|++.+
T Consensus 397 ~i~~v~~~~~~~gWvLiRpS~tEP~iri~~Ea~~~~~a~~l~~~~~~~v~~~~ 449 (450)
T PRK14314 397 AIKDVEEALGDSGRVLLRYSGTENLCRVMVEGEDKHQVDSLAKEIADVVEKEL 449 (450)
T ss_pred HHHHHHhhhCCCcEEEEecCCCCcEEEEEEeeCCHHHHHHHHHHHHHHHHHhh
Confidence 234555544 5899999999999999999999999999999999999998743
No 24
>cd05802 GlmM GlmM is a bacterial phosphoglucosamine mutase (PNGM) that belongs to the alpha-D-phosphohexomutase superfamily. It is required for the interconversion of glucosamine-6-phosphate and glucosamine-1-phosphate in the biosynthetic pathway of UDP-N-acetylglucosamine, an essential precursor to components of the cell envelope. In order to be active, GlmM must be phosphorylated, which can occur via autophosphorylation or by the Ser/Thr kinase StkP. GlmM functions in a classical ping-pong bi-bi mechanism with glucosamine-1,6-diphosphate as an intermediate. Other members of the alpha-D-phosphohexomutase superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=100.00 E-value=5.9e-73 Score=582.69 Aligned_cols=376 Identities=28% Similarity=0.368 Sum_probs=304.7
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie 80 (461)
||++++++||+++|++|+++|.+|||+++|++. +++++|||||||||||++||||||++++|.+++++.++.++
T Consensus 52 ~l~~a~~~gL~s~G~~V~~~g~~pTP~~~~av~------~~~~~gGI~ITaSHnp~~~nGiK~~~~~G~~i~~~~~~~i~ 125 (434)
T cd05802 52 MLESALAAGLTSAGVDVLLLGVIPTPAVAYLTR------KLRADAGVVISASHNPFEDNGIKFFSSDGYKLPDEVEEEIE 125 (434)
T ss_pred HHHHHHHHHHHHCCCcEEEEcccchHHHHHHHH------HhCCCeEEEEEecCCchhhCCEEEECCCCCcCCHHHHHHHH
Confidence 689999999999999999999999999999997 56889999999999999999999999999988877666666
Q ss_pred HHHhHHhhhhhcccccccccCCCcEEEE-cchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012560 81 RAADIYKQFMVEGLTNLEKQTSTSIKRV-DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (461)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~lg 159 (461)
.... .+.+........+.+... +..+.|++++.+.++.. ..+++|||+||+||+++.+++++|++||
T Consensus 126 ~~~~------~~~~~~~~~~~~g~~~~~~~~~~~Y~~~l~~~~~~~------~~~~lkVvvD~~nG~~~~~~~~ll~~lg 193 (434)
T cd05802 126 ALID------KELELPPTGEKIGRVYRIDDARGRYIEFLKSTFPKD------LLSGLKIVLDCANGAAYKVAPEVFRELG 193 (434)
T ss_pred HHHh------CccccccccccCeeEEEccchHHHHHHHHHHhcCcc------ccCCCEEEEECCCchHHHHHHHHHHHcC
Confidence 5432 111110001123445544 57889999999887531 1468999999999999999999999999
Q ss_pred CCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012560 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (461)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~~l~~~ 239 (461)
|+++ .+|+.+||.||+..|.|+ +++.+.+.|++.++|+|+++||||||++++|++|+++++|++++|+++++++.+
T Consensus 194 ~~v~-~in~~~dg~~~~~~~~~~---~~~~l~~~v~~~~adlGia~DgDgDR~~~vd~~G~~i~~d~~~~l~a~~l~~~~ 269 (434)
T cd05802 194 AEVI-VINNAPDGLNINVNCGST---HPESLQKAVLENGADLGIAFDGDADRVIAVDEKGNIVDGDQILAICARDLKERG 269 (434)
T ss_pred CeEE-EecCCCCCCCCCCCCCcc---CHHHHHHHHHhcCCCEEEEEcCCCceEEEECCCCCEeCHHHHHHHHHHHHHHhC
Confidence 9998 689999999987655553 467889999999999999999999999999999999999999999999998875
Q ss_pred --CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecCCccCCcHHHHHHH
Q 012560 240 --PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVK 317 (461)
Q Consensus 240 --~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ 317 (461)
++..||.+..||. +++.+++++|+++++||||++|++++|.+.+ .+||||+|||++|+++++.+||++++++
T Consensus 270 ~~~~~~vv~~v~ss~-~~~~~~~~~g~~v~~~~~G~~~i~~~~~~~~-----~~~ggE~sG~~~f~~~~~~~Dgi~a~l~ 343 (434)
T cd05802 270 RLKGNTVVGTVMSNL-GLEKALKELGIKLVRTKVGDRYVLEEMLKHG-----ANLGGEQSGHIIFLDHSTTGDGLLTALQ 343 (434)
T ss_pred CCCCCeEEEecCCcH-HHHHHHHHcCCeEEEEcChHHHHHHHHHhcC-----CEEEEecCCCEEecCcCCCCcHHHHHHH
Confidence 3456776665555 6677888899999999999999999998765 4799999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcccHHHHHhhccCCCccceeeeeecccCCcccCCccchhhHHHH--HHHHhhhcCCCCCCCCCc
Q 012560 318 LLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVL--KHLENRVDSDPKLQKAPV 395 (461)
Q Consensus 318 ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~l~~~~~~~~~~~~~~~ 395 (461)
++++|+..+ ++|++++++||.++.. +.+++ ++. +++++ +.+.+
T Consensus 344 lle~la~~~--------~~ls~l~~~l~~~~~~---~~~v~--~~~---------~~~~~~~~~~~~------------- 388 (434)
T cd05802 344 LLAIMKRSG--------KSLSELASDMKLYPQV---LVNVR--VKD---------KKALLENPRVQA------------- 388 (434)
T ss_pred HHHHHHHhC--------CCHHHHHhhccccCee---eEEEE--eCC---------ccccccCHHHHH-------------
Confidence 999987643 4599999999876422 22222 221 11222 11211
Q ss_pred ccCceEEEe-cCeEEEEEecCCCceeEEEEeeCCHHHHHHHHHHH
Q 012560 396 NYEGVRVSG-SGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAV 439 (461)
Q Consensus 396 ~~dGlki~~-~~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~ 439 (461)
.+||+++.. ++||+|||||||||++|||+||.|++.+++|++.+
T Consensus 389 ~~~~~~~~~~~~gW~liRpS~tep~irv~~Ea~s~~~~~~l~~~~ 433 (434)
T cd05802 389 AIAEAEKELGGEGRVLVRPSGTEPLIRVMVEGEDEELVEKLAEEL 433 (434)
T ss_pred HHHHHHHhhCCCeEEEEecCCCCcEEEEEEeeCCHHHHHHHHHhh
Confidence 134555444 57999999999999999999999999999998764
No 25
>PRK14320 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=1.2e-72 Score=580.98 Aligned_cols=384 Identities=23% Similarity=0.260 Sum_probs=309.6
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie 80 (461)
||++|+++||+++|++|+++|.+|||+++|++. +++++|||||||||||++||||||++++|.++.++.++.+|
T Consensus 56 ~l~~a~~~gL~s~G~~V~d~g~~pTP~~~~av~------~~~~~gGI~ITaSHNp~~~nGiK~~~~~G~~i~~~~~~~Ie 129 (443)
T PRK14320 56 FLKFALVSGLNAAGIDVLDLGVVPTPVVAFMTV------KHRAAAGFVITASHNKFTDNGIKLFSSNGFKLDDALEEEVE 129 (443)
T ss_pred HHHHHHHHHHHHCCCEEEEecccCchHHHHHHH------HcCCceEEEEEeCCCchHHCeEEEECCCCCcCCHHHHHHHH
Confidence 689999999999999999999999999999997 56899999999999999999999999999988887777776
Q ss_pred HHHhHHhhhhhcccccccccCCCcEEEE-cchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012560 81 RAADIYKQFMVEGLTNLEKQTSTSIKRV-DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (461)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~lg 159 (461)
+..+ +.+.+.. ....+.+... +..+.|++++.+.++. . ...++|||+||+||+++.+++++|++||
T Consensus 130 ~~~~--~~~~~~~-----~~~~g~~~~~~~~~~~Y~~~l~~~~~~-~-----~~~~~kVvvD~~nG~~~~~~~~ll~~lg 196 (443)
T PRK14320 130 DMID--GDFIYQP-----QFKFGSYKILANAIDEYIESIHSRFAK-F-----VNYKGKVVVDCAHGAASHNFEALLDKFG 196 (443)
T ss_pred HHHh--ccccccc-----cccCcceEeccchHHHHHHHHHHHHHh-h-----ccCCCEEEEECCCchHHHHHHHHHHHcC
Confidence 6422 1111100 1123555544 5789999999887751 1 1135699999999999999999999999
Q ss_pred CCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012560 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (461)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~~l~~~ 239 (461)
|+++ .+|+.|||.|++..|. +++++.+.+.|++.++|+|+++||||||++++|++|+++++|++++|+++++++..
T Consensus 197 ~~v~-~i~~~~dg~~~~~~~~---~~~l~~l~~~v~~~~adlGia~DgDaDR~~~vd~~G~~l~gd~~~al~a~~l~~~~ 272 (443)
T PRK14320 197 INYV-SIASNPDGLNINVGCG---ATCVSNIKKAVKEQKADLGISLDGDADRIIIVDENGQEIDGDGILNILAQYSDICG 272 (443)
T ss_pred CcEE-EECCcCCCCCCCCCCc---hHhHHHHHHHHHHcCCCEEEEECCCCceEEEECCCCcccCHHHHHHHHHHHHHHhC
Confidence 9998 5889999999754433 35689999999999999999999999999999999999999999999999987654
Q ss_pred CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecCCccCCcHHHHHHHHH
Q 012560 240 PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVKLL 319 (461)
Q Consensus 240 ~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ll 319 (461)
+..++|.++.||+ .++.+++++|+++++||||+++++++|.+.+ ++||||+|||++|+++++.+|||++++++|
T Consensus 273 ~~~~vV~~~~~s~-~~~~~~~~~g~~~~~t~vG~~~i~~~m~~~~-----~~~ggE~sG~~~~~~~~~~~Dgi~a~~~ll 346 (443)
T PRK14320 273 GTNGIVGTQMTNM-SYENHYRANKIPFIRSKVGDRYVLEDLVKYG-----YKIGGESSGHVINLNFGTTGDGLFTAIQLL 346 (443)
T ss_pred CCCCEEEecCCcH-HHHHHHHHCCCCEEEecCchHHHHHHHHhCC-----CcEeecCCccEEccCCCCcCCHHHHHHHHH
Confidence 3236888888888 5567778899999999999999999998865 479999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCcccHHHHHhhccCCCccceeeeeecccCCcccCCccchhhHHHHHHHHhhhcCCCCCCCCCcccCc
Q 012560 320 NKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYEG 399 (461)
Q Consensus 320 ~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~dG 399 (461)
++|+... ++|++++... .++.+.+++ |+|... . +.+.++++.+ .+++
T Consensus 347 e~la~~~--------~~ls~l~~~~-~~~~~~~~~------~~~~~~----~-~~~~~~~~~~-------------~~~~ 393 (443)
T PRK14320 347 AIFSQAD--------KPVSEFKLQG-ELMQQTLIN------VPLTKK----V-AREDLQKVAS-------------DVND 393 (443)
T ss_pred HHHHHcC--------CCHHHHhccc-ccCceEEEE------EEecCC----C-CcchhHHHHH-------------HHHH
Confidence 9998643 4599999542 223333333 444110 0 1123333322 1334
Q ss_pred eEEEe-cCeEEEEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcC
Q 012560 400 VRVSG-SGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEF 446 (461)
Q Consensus 400 lki~~-~~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v~~~ 446 (461)
+++.. ++||+|||||||||++|||+||.|++.++++++.+.++|++-
T Consensus 394 ~~~~~~~~gW~LiRpS~teP~~rv~~Ea~s~e~a~~l~~~~~~~i~~~ 441 (443)
T PRK14320 394 VEKRLGNRGRVLLRPSGTEPVLRVMVEADDKSLATNEAEYLVEKVKQK 441 (443)
T ss_pred HHhhhCCCceEEEecCCCCceEEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 44443 689999999999999999999999999999999999999864
No 26
>PRK14318 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=9.2e-73 Score=582.73 Aligned_cols=384 Identities=25% Similarity=0.324 Sum_probs=308.5
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie 80 (461)
||++|+++||+++|++|+++|.+|||+++|++. +++++|||||||||||++||||||++++|.+++++.++.++
T Consensus 59 ~l~~a~~~gL~s~G~~V~~~g~~pTP~~~~av~------~~~~~gGI~ITaSHnp~~~nGiK~~~~~G~~i~~~~~~~Ie 132 (448)
T PRK14318 59 FLEAAVSAGLASAGVDVLRVGVLPTPAVAYLTA------ALDADFGVMISASHNPMPDNGIKFFAAGGHKLPDDVEDRIE 132 (448)
T ss_pred HHHHHHHHHHHHCCCEEEEecccCchHHHHHHH------hcCCCEEEEEEcCCCCcccCCEEEEcCCCCcCCHHHHHHHH
Confidence 689999999999999999999999999999997 56889999999999999999999999999998887777666
Q ss_pred HHHhHHhhhhhcccccccccCCCcEEEE-cchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012560 81 RAADIYKQFMVEGLTNLEKQTSTSIKRV-DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (461)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~lg 159 (461)
+... .+++........+.+... +..+.|++++.+.++ .+.+++|||+||+||+++.+++++|++||
T Consensus 133 ~~~~------~~~~~~~~~~~~g~~~~~~~~~~~Y~~~l~~~i~-------~~~~~~kVvvD~~nG~~~~~~~~ll~~lG 199 (448)
T PRK14318 133 AVLG------QLPWLRPTGAGVGRVIDAPDATDRYLRHLLGALP-------TRLDGLKVVVDCAHGAASGVAPEAYRAAG 199 (448)
T ss_pred HHHh------ccCccccccccCceEEECCcHHHHHHHHHHHHhc-------cccCCCEEEEECCCchHHHHHHHHHHHcC
Confidence 5432 111110001123445444 578899999988874 13468999999999999999999999999
Q ss_pred CCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012560 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (461)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~~l~~~ 239 (461)
|+++ .+|+.|||.||+..|.| ++++.+.+.|++.++|+|+++||||||++++|++|+++++|++++|++.++++..
T Consensus 200 ~~v~-~in~~~dg~~~~~~~~~---~~l~~l~~~v~~~~adlGia~DgD~DR~~~vd~~G~~l~~d~~~~l~a~~l~~~~ 275 (448)
T PRK14318 200 ADVI-AINADPDGLNINDGCGS---THLEQLQAAVVAHGADLGLAHDGDADRCLAVDANGNVVDGDQIMAILALAMKEAG 275 (448)
T ss_pred CEEE-EeccCCCCCCCCCCCCC---CCHHHHHHHHHhcCCCEEEEecCCCceEEEECCCCcEeCHHHHHHHHHHHHHHhc
Confidence 9988 68999999998654443 4578899999999999999999999999999999999999999999998887764
Q ss_pred C--CCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecCCccCCcHHHHHHH
Q 012560 240 P--GTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVK 317 (461)
Q Consensus 240 ~--~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ 317 (461)
+ +..+|++. +|+..++.+++++|+++++||||++|++++|.+.+ ++||||+|||++|+++++.+||++++++
T Consensus 276 ~~~~~~vV~~v-~ss~~~~~~~~~~g~~v~~t~vG~~~i~~~~~~~~-----~~~ggE~sG~~~~~~~~~~~Dgi~a~l~ 349 (448)
T PRK14318 276 ELASDTLVATV-MSNLGLKLAMREAGITVVTTAVGDRYVLEEMRAGG-----YSLGGEQSGHIVMPDHATTGDGILTGLR 349 (448)
T ss_pred CCCCCcEEEEe-cCchHHHHHHHHcCCcEEEeCChHHHHHHHHHhcC-----cEEEEcCcCcEEecCCCCCCCHHHHHHH
Confidence 2 33577554 55557777888899999999999999999998754 4799999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcccHHHHHhhccCCCccceeeeeecccCCcccCCccchhhHHHHHH--HHhhhcCCCCCCCCCc
Q 012560 318 LLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKH--LENRVDSDPKLQKAPV 395 (461)
Q Consensus 318 ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--l~~~~~~~~~~~~~~~ 395 (461)
++++|+..+ ++|+++++++|.+.... . . |+| ..++++|+. +.+. +.
T Consensus 350 ile~la~~~--------~~ls~l~~~~~~~p~~~---~--~--~~~-------~~~~~~~~~~~~~~~----------i~ 397 (448)
T PRK14318 350 LMARMAQTG--------KSLAELASAMTVLPQVL---I--N--VPV-------VDKTTAATAPSVRAA----------VA 397 (448)
T ss_pred HHHHHHHhC--------CCHHHHHhhhhhcCcce---e--e--eec-------CCccchhccHHHHHH----------HH
Confidence 999987653 45999998776542111 1 2 666 113444431 2111 01
Q ss_pred ccCceEEEecCeEEEEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcCC
Q 012560 396 NYEGVRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFP 447 (461)
Q Consensus 396 ~~dGlki~~~~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v~~~~ 447 (461)
.+| +++. ++||+|||||+|||++|||+||.|++.|+++++.+.++|++-+
T Consensus 398 ~~~-~~~~-~~gw~lvRpS~teP~irv~~Ea~~~~~a~~l~~~~~~~v~~~~ 447 (448)
T PRK14318 398 RAE-AELG-DTGRVLLRPSGTEPLVRVMVEAADEETARRVAGRLADVVAEAL 447 (448)
T ss_pred HHH-hhhc-CCeEEEEeeCCCCcEEEEEEeECCHHHHHHHHHHHHHHHHHhc
Confidence 112 1111 5899999999999999999999999999999999999997643
No 27
>PLN02307 phosphoglucomutase
Probab=100.00 E-value=3e-72 Score=587.61 Aligned_cols=432 Identities=21% Similarity=0.228 Sum_probs=324.6
Q ss_pred CHHHHHHHHHHhCCCcEEEe---CCCCchhhhhhhccccCcccC---CCCeEEEEcCCCCC---CCCCeeeEEcCCCCCC
Q 012560 1 MLQDAVSRGITGAGLDVVQY---GLASTPAMFNSTLTEGDAFFC---PVDGAIMITASHLP---YNRNGLKFFTNAGGLG 71 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~---g~~~tP~~~~a~~~~~~~~~~---~a~gGI~ITaSHNP---~~~nGiK~~~~~G~~~ 71 (461)
+|+++++++|+++|++|+++ |.+|||+++|+++ ++ ++++|||||||||| ++|||||+++++|.++
T Consensus 76 ~fa~~~a~~L~a~Gi~V~~~~~~G~~PTP~vsfav~------~~~~~~a~gGImITASHNP~~~~eyNGiK~~~~~G~~~ 149 (579)
T PLN02307 76 EAIQIIIKIAAANGVRRVWVGQNGLLSTPAVSAVIR------ERDGSKANGGFILTASHNPGGPEEDFGIKYNYESGQPA 149 (579)
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCCccCchHHHHHHH------HhcccCCCeEEEEecCCCCCCCCCCCEEEEECCCCCcC
Confidence 58999999999999999999 7999999999997 56 89999999999999 8999999999999998
Q ss_pred CHHHHHHH-HHHHhHHhhhhh-ccccc-----ccccC-----CCcEEEEcchHHHHHHHHHHHHhhcCCCCCCCCCcEEE
Q 012560 72 KPDIKDIL-ERAADIYKQFMV-EGLTN-----LEKQT-----STSIKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIV 139 (461)
Q Consensus 72 ~~~~~~~i-e~~~~~~~~~~~-~~~~~-----~~~~~-----~~~i~~~~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVv 139 (461)
.++.++.+ ++..+. ....+ +.+.. ..... ...+...+..+.|++.+.+.++.+.+.....++++|||
T Consensus 150 ~~~~~~~I~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~Yi~~l~~~i~~~~i~~~~~~~~lkVv 228 (579)
T PLN02307 150 PESITDKIYGNTLTI-KEYKMAEDIPDVDLSAVGVTKFGGPEDFDVEVIDPVEDYVKLMKSIFDFELIKKLLSRPDFTFC 228 (579)
T ss_pred CcHHHHHHHHHHHhh-hhhhhcccccccchhhhcccccccccccceEEecCHHHHHHHHHHhhCHHHHhhhcccCCCeEE
Confidence 77766555 332221 11111 00100 00000 11224457899999999887753322111113589999
Q ss_pred EeCCCCCchHHHHHHH-hhcCCCcccceecCCCCCCCCCCCCCCchHHHHHHHHHH-------HhcCCcEEEeeCCCCce
Q 012560 140 VDAGNGAGGFFAAKVL-EPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAV-------LDNKADLGIIFDTDVDR 211 (461)
Q Consensus 140 vd~~~G~~~~~~~~ll-~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v-------~~~~adlgia~D~DgDR 211 (461)
+||+||+++.+++++| +++||+++..+|+.|||.||++.|||+.+. +.++...+ ++.++|+|+++||||||
T Consensus 229 vD~~hGag~~~~~~lL~~~lG~~~~~~i~~~pDg~Fp~~~PnP~~~~-l~~lv~~~~~~~~~~~~~~aDlgiA~DgDaDR 307 (579)
T PLN02307 229 FDAMHGVTGAYAKRIFVEELGAPESSLLNCVPKEDFGGGHPDPNLTY-AKELVKRMGLGKTSYGDEPPEFGAASDGDGDR 307 (579)
T ss_pred EeCCCCccHHHHHHHHHHhcCCCceeeecCccCCCCCCCCCCCCHHH-HHHHHHHhhhccccccccCCCEEEEeCCCCCe
Confidence 9999999999999999 799998852488999999999999997543 44443333 44569999999999999
Q ss_pred eEEEcCCCccccchhHHHHHHHHHHHhC----CCC-eEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhccc
Q 012560 212 SAAVDSTGHELNRNRLIALMSAIVLEEH----PGT-TIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSI 286 (461)
Q Consensus 212 ~~~vd~~G~~l~~d~~~~L~~~~~l~~~----~~~-~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~ 286 (461)
++++ ++|+++.++.++++++.+++... ++. .||.+.+||. +++.+++++|+++++|+||||||.++|.+.+
T Consensus 308 ~~vv-~~g~~i~~d~~l~ll~~~~l~~~~~~~~g~~~VV~tv~sS~-~l~~ia~~~G~~~~~t~vGfk~I~~~m~e~~-- 383 (579)
T PLN02307 308 NMIL-GKRFFVTPSDSVAIIAANAQEAIPYFSGGLKGVARSMPTSA-ALDVVAKKLNLPFFEVPTGWKFFGNLMDAGK-- 383 (579)
T ss_pred EEEE-ecCcEEcCChHHHHHHHHHHHhhhhhhcCCcEEEEeChhhH-HHHHHHHHcCCeEEEcCchHHHHHHHHHhCC--
Confidence 9999 77999999999999998887642 222 5776666665 6688899999999999999999999998753
Q ss_pred CCcceeEeeeecceeecCCccCCcHHHHHHHHHHHHHHHHHcCCCCCcc--cHHHHHhhccCCCc-cceeeeeecccCCc
Q 012560 287 GEESHLAIETSGHGALKENHWLDDGAYLMVKLLNKLASARAAGRGGGSK--VLTDLVDGLEEPGF-AVELRLKIDQNHSD 363 (461)
Q Consensus 287 g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ll~~l~~~~~~~~~~~~~--~Ls~ll~~lp~~~~-~~~~~~~~~~~~~~ 363 (461)
++||||||||++ +++.+.+||++++++++++++...++ .+++.+ +|++++++|++.|. ..+.+.++. .++
T Consensus 384 ---~~~GgEeSgG~~-~~~~~dkDGi~aallllel~a~~~~~-~~~~~~~~tl~~~l~el~~~~G~~~~~~~~~~--~~~ 456 (579)
T PLN02307 384 ---LSICGEESFGTG-SDHIREKDGIWAVLAWLSILAHKNKD-VLPGGKLVTVEDIVREHWATYGRNFYSRYDYE--NVD 456 (579)
T ss_pred ---cEEEEcccCCCC-CCCCCCCcHHHHHHHHHHHHHHhCCC-cccccCcCCHHHHHHHHHHHhCCCeeeeccee--cCC
Confidence 579999999985 88888999999999998887765322 000012 58999999998753 233344443 222
Q ss_pred ccCCccchhhHHHHHHHHhhh-cCCCCCCC-------------------CCcccCceEEEe-cCeEEEEEecCCC---ce
Q 012560 364 LKGGSFRDYGEAVLKHLENRV-DSDPKLQK-------------------APVNYEGVRVSG-SGGWFLLRLSLHD---PV 419 (461)
Q Consensus 364 ~~~~~~~~~~~~v~~~l~~~~-~~~~~~~~-------------------~~~~~dGlki~~-~~~w~liRpSgTe---P~ 419 (461)
.+...++|++|++.. ....+... .+...||+|+.+ +++|+++|||||| |+
T Consensus 457 ------~~~~~~~~~~lr~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~~~~dglk~~~~dg~wi~~RpSGTE~~~Pk 530 (579)
T PLN02307 457 ------SEAANKMMDHLRDLVNKSKKGIKYGVYTLAFADDFEYTDPVDGSVSSKQGIRFLFTDGSRIIFRLSGTGSAGAT 530 (579)
T ss_pred ------HHHHHHHHHHHhcccccccCCCEecceEEEEEeeceeecCCCCCCCccCeEEEEEcCCeEEEEEcCCCCCCCCe
Confidence 133467888887631 11111100 122379999997 5679999999999 99
Q ss_pred eEEEEee-CCH--HHHHHHHHHHHHHhhcCCCCCchHHHHHHh
Q 012560 420 LPLNIEA-PSR--EDAVKLGLAVAAATKEFPALDTSALDKFVQ 459 (461)
Q Consensus 420 irvy~Ea-~~~--~~a~~l~~~~~~~v~~~~~~~~~~~~~~~~ 459 (461)
+|+|+|+ .++ +...+++++.+..+.. .+.+++|++||-
T Consensus 531 iK~Y~e~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 571 (579)
T PLN02307 531 IRLYIEQYEKDPSKHGRDAQEALKPLIDV--ALKLSKLKEFTG 571 (579)
T ss_pred EEEEEEEecCCHHHHHHHHHHHHHHHHHH--HHHHhChhHHhC
Confidence 9999999 777 8899999999999886 888999999984
No 28
>PTZ00150 phosphoglucomutase-2-like protein; Provisional
Probab=100.00 E-value=1.5e-72 Score=596.01 Aligned_cols=397 Identities=20% Similarity=0.177 Sum_probs=303.1
Q ss_pred CHHHHHHHHHHhCCCcEEEeC-CCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQYG-LASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDIL 79 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~g-~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~i 79 (461)
+|+++++++|+++|++|+++| .+|||+++|+++ +++|+|||||||||||++||||||++++|+++.++..+.+
T Consensus 104 ~fa~~~a~~L~a~Gi~V~~~g~~~pTP~lsfav~------~~~a~gGImITASHNP~eyNGiK~~~~~G~~i~~~~~~~i 177 (584)
T PTZ00150 104 RFAEITASVFLSKGFKVYLFGQTVPTPFVPYAVR------KLKCLAGVMVTASHNPKEDNGYKVYWSNGAQIIPPHDKNI 177 (584)
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCCCcHHHHHHHH------HhCCCeEEEEeccCCCCCCCCEEEeCCCCcccCCcccHHH
Confidence 589999999999999999997 999999999997 6789999999999999999999999999997654433333
Q ss_pred HH-HHhHHhhhhhcccccccccCCCcEEE--EcchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHh
Q 012560 80 ER-AADIYKQFMVEGLTNLEKQTSTSIKR--VDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLE 156 (461)
Q Consensus 80 e~-~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~ 156 (461)
++ +.+....+ .+.+. +...+.+.. .++.+.|++++.+.++... ++.+++|||+||+||+++.+++++|+
T Consensus 178 ~~~Ie~~~~~~-~~~~~---~~~~~~~~~~~~d~~~~Yi~~l~~~i~~~~----i~~~~lkIv~d~~~G~g~~~~~~iL~ 249 (584)
T PTZ00150 178 SAKILSNLEPW-SSSWE---YLTETLVEDPLAEVSDAYFATLKSEYNPAC----CDRSKVKIVYTAMHGVGTRFVQKALH 249 (584)
T ss_pred HHHHHHhcccc-ccchh---hhccccccchhhhhHHHHHHHHHhhcChhh----hccCCCeEEEeCCCCccHHHHHHHHH
Confidence 32 11111001 11111 111112221 2567889999988765322 23468999999999999999999999
Q ss_pred hcCCC---cccceecCCCCCCCCC-CCCCCc-hHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCC---ccccchhHH
Q 012560 157 PLGAK---TSGSQFLEPDGMFPNH-IPNPED-KTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTG---HELNRNRLI 228 (461)
Q Consensus 157 ~lg~~---v~~~~~~~~d~~f~~~-~p~P~~-~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G---~~l~~d~~~ 228 (461)
++||+ ++ ..++.|||.||+. .|+|+. +++++.+.+.|++.++|+|+++||||||++++|+.| +++++|+++
T Consensus 250 ~lG~~~~~~v-~~~~~pDg~Fp~~~~PnPe~~~~~l~~~~~~v~~~~adlgia~DpDaDR~~vvd~~g~~~~~l~gd~l~ 328 (584)
T PTZ00150 250 TVGLPNLLSV-AQQAEPDPEFPTVTFPNPEEGKGALKLSMETAEAHGSTVVLANDPDADRLAVAEKLNNGWKIFTGNELG 328 (584)
T ss_pred hcCCCCceEe-ccccccCcCCCCCCCcChhhhHHHHHHHHHHHHHhCCCEEEEeCCCCCceEEEEEcCCceEEcChhHHH
Confidence 99997 44 5788999999985 799997 899999999999999999999999999999998654 899999999
Q ss_pred HHHHHHHHHhCCC-------CeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCC-cceeEeeeecce
Q 012560 229 ALMSAIVLEEHPG-------TTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGE-ESHLAIETSGHG 300 (461)
Q Consensus 229 ~L~~~~~l~~~~~-------~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~-~~~~g~E~sG~~ 300 (461)
+|+++|+++.++. ..||.+++|| .+++.+|+++|+++++|+||||||+++|.+.+..+. .++||||||||+
T Consensus 329 aLla~~ll~~~~~~g~~~~~~~Vv~tv~sS-~~l~~ia~~~g~~v~~t~tGfk~I~~~m~~~~~~~~~~~~~ggEeSgG~ 407 (584)
T PTZ00150 329 ALLAWWAMKRYRRQGIDKSKCFFICTVVSS-RMLKKMAEKEGFQYDETLTGFKWIGNKAIELNAENGLTTLFAYEEAIGF 407 (584)
T ss_pred HHHHHHHHHhhhhcCCCCCCcEEEEehhhh-HHHHHHHHHcCCEEEECCCChHHHHHHHHHHHhcCCceEEEEEeccCcc
Confidence 9999999886421 2477555555 577889999999999999999999999987543322 468999999999
Q ss_pred eecCCccCCcHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCCccce-eeee-ecccCCcccCCccchhhHHHHH
Q 012560 301 ALKENHWLDDGAYLMVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVE-LRLK-IDQNHSDLKGGSFRDYGEAVLK 378 (461)
Q Consensus 301 ~~~~~~~~~Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~v~~ 378 (461)
+++++.+.+||++++++++++++. ...++ ++|++++++||+.|.... .... +. +. .+.+.++|+
T Consensus 408 ~~~~~~~~kDgi~aal~ile~~~~-l~~~g----~sL~e~l~~l~~~~G~~~~~~~~~~~--~~-------~~~~~~~~~ 473 (584)
T PTZ00150 408 MLGTRVRDKDGVTAAAVVAEMALY-LYERG----KTLVEHLESLYKQYGYHFTNNSYYIC--YD-------PSRIVSIFN 473 (584)
T ss_pred cCCCCCCCcHHHHHHHHHHHHHHH-HHHcC----CCHHHHHHHHHHHHCCCccceeeEec--CC-------HHHHHHHHH
Confidence 999999999999999988887542 22234 459999999998764221 1111 22 11 123457888
Q ss_pred HHHh--hh-cCCCCCCCC-C------------------c---ccCceEEEe-cCeEEEEEecCCCceeEEEEeeC
Q 012560 379 HLEN--RV-DSDPKLQKA-P------------------V---NYEGVRVSG-SGGWFLLRLSLHDPVLPLNIEAP 427 (461)
Q Consensus 379 ~l~~--~~-~~~~~~~~~-~------------------~---~~dGlki~~-~~~w~liRpSgTeP~irvy~Ea~ 427 (461)
++++ .. .+..|.++. + . ..||+|+.+ +|+|+++|||||||++|+|+|+.
T Consensus 474 ~l~~~~~~~~~~~g~~v~~~~d~~~~~~~~~~~~~~~lp~~~~~~~lk~~~~~g~~~~~RpSGTEPkik~Y~e~~ 548 (584)
T PTZ00150 474 DIRNNGSYPTKLGGYPVTRIRDLTTGYDTATPDGKPLLPVSASTQMITFYFENGAIITIRGSGTEPKLKWYAELS 548 (584)
T ss_pred HHhccCCcchhhCCeeEEEEEecccccccccCCCcccCCCcccCCeEEEEEcCCeEEEEEcCCCCCeEEEEEEec
Confidence 8865 21 222222110 0 0 358999997 56799999999999999999993
No 29
>cd03088 ManB ManB is a bacterial phosphomannomutase (PMM) that catalyzes the conversion of mannose 6-phosphate to mannose-1-phosphate in the second of three steps in the GDP-mannose pathway, in which GDP-D-mannose is synthesized from fructose-6-phosphate. In Mycobacterium tuberculosis, the causative agent of tuberculosis, PMM is involved in the biosynthesis of mannosylated lipoglycans that participate in the association of mycobacteria with host macrophage phagocytic receptors. ManB belongs to the the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrall
Probab=100.00 E-value=1.1e-71 Score=576.04 Aligned_cols=389 Identities=22% Similarity=0.198 Sum_probs=305.7
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie 80 (461)
||++++++||+++|++|+++|.+|||+++|++. ++++ |||||||||||++||||||++++|. +.+..++.++
T Consensus 51 ~l~~a~~~gL~~~Gv~V~~~g~~pTP~~~~a~~------~~~~-ggI~ITaSHnp~~~nGiK~~~~~G~-~~~~~e~~I~ 122 (459)
T cd03088 51 RIAAACAAALRDAGFRVVDCGAVPTPALALYAM------KRGA-PAIMVTGSHIPADRNGLKFYRPDGE-ITKADEAAIL 122 (459)
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHH------HcCC-cEEEEeCCCCCCCCCCEEEECCCCC-CChHHHHHHH
Confidence 689999999999999999999999999999997 3455 8999999999999999999999994 4444455555
Q ss_pred HHHhHHhhhhhcccccccccCCCcEEEEcchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcCC
Q 012560 81 RAADIYKQFMVEGLTNLEKQTSTSIKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLGA 160 (461)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~lg~ 160 (461)
...+ .+.+.... ....+.....+..+.|++.+.+.++.. +.+++|||+||+||+++.+++++|++|||
T Consensus 123 ~~~~---~~~~~~~~---~~~~~~~~~~~~~~~Y~~~l~~~i~~~------~~~~lkIvvD~~~G~~~~~~~~ll~~lG~ 190 (459)
T cd03088 123 AALV---ELPEALFD---PAGALLPPDTDAADAYIARYTDFFGAG------ALKGLRIGVYQHSSVGRDLLVRILEALGA 190 (459)
T ss_pred HHHH---hhcccccc---ccccCCcccchHHHHHHHHHHHHhCcc------ccCCCEEEEECCCCCHHHHHHHHHHHcCC
Confidence 4321 12111000 000122333467889999998887521 23689999999999999999999999999
Q ss_pred CcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhCC
Q 012560 161 KTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEHP 240 (461)
Q Consensus 161 ~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~~l~~~~ 240 (461)
+++ .+++ ++.|+...|+|..+++++.+.+.|++.++|+|+++||||||++++|++|+++++|++++|+++++.
T Consensus 191 ~v~-~l~~--~~~~~~~~~~~~~~~~l~~l~~~v~~~~adlGia~D~DgDR~~vvd~~G~~i~~d~l~~l~~~~~~---- 263 (459)
T cd03088 191 EVV-PLGR--SDTFIPVDTEAVRPEDRALAAAWAAEHGLDAIVSTDGDGDRPLVADETGEWLRGDILGLLTARFLG---- 263 (459)
T ss_pred eEE-EeCC--CCCCCCCCCCcCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCceeECCCCCEECchHHHHHHHHHhC----
Confidence 997 4554 446666566665568899999999999999999999999999999999999999999999998863
Q ss_pred CCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecC----------CccCCc
Q 012560 241 GTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKE----------NHWLDD 310 (461)
Q Consensus 241 ~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~----------~~~~~D 310 (461)
...|| ++++|+.+++.++. ++++++|||||+|++++|.+....|...++|+|+|||++|++ +++.+|
T Consensus 264 ~~~Vv-~~v~ss~~i~~~~~--~~~~~~t~vG~~~i~~~m~~~~~~~~~~~~g~E~sg~~~~~~~~~~~~~~~~~~~~~D 340 (459)
T cd03088 264 ADTVV-TPVSSNSAIELSGF--FKRVVRTRIGSPYVIAAMAEAAAAGAGRVVGYEANGGFLLGSDIERNGRTLKALPTRD 340 (459)
T ss_pred CCEEE-EccCCcHHHHHcCC--ceeEEECCCccHHHHHHHHHHHhcCCceEEEEecccceeccchhhccccccccCCCcc
Confidence 23455 66677767776643 479999999999999999986554555788999999999986 456899
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCCccceeeeeecccCCcccCCccchhhHHHHHHHHhhhcCC---
Q 012560 311 GAYLMVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSD--- 387 (461)
Q Consensus 311 gi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~--- 387 (461)
|++++++++++|+..+ ++|++++++||++|... ..+.. ||| +.++++|++|.+.....
T Consensus 341 gi~a~l~ile~l~~~~--------~~Ls~ll~~l~~~~~~~---~~i~~-~~~-------~~~~~~m~~l~~~~~~~~~~ 401 (459)
T cd03088 341 AVLPILAVLAAAKEAG--------IPLSELVASLPARFTAS---DRLQN-FPT-------EKSQALIARLSADPEARAAF 401 (459)
T ss_pred HHHHHHHHHHHHHhcC--------CCHHHHHHHHhhcceEh---hcccc-CCH-------HHHHHHHHHHHhChHhhhhh
Confidence 9999999999886542 45999999999876532 22221 676 45788999997642100
Q ss_pred ---CCC-CCCCcccCceEEEe-cCeEEEEEecCCCceeEEEEeeCCHHHHHHHHHH
Q 012560 388 ---PKL-QKAPVNYEGVRVSG-SGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLA 438 (461)
Q Consensus 388 ---~~~-~~~~~~~dGlki~~-~~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~ 438 (461)
.+. ...++++||+|+++ +++|+|||||||||++|||+|++|++.+++++++
T Consensus 402 ~~~~~~~~~~v~~~DGvk~~~~dg~W~liRpSgTEP~~riy~Ea~~~~~~~~l~~~ 457 (459)
T cd03088 402 FFALGGEVASIDTTDGLRMTFANGDIVHLRPSGNAPELRCYVEADSEERARELLAR 457 (459)
T ss_pred hhccCCcccccCCCCeEEEEECCCCEEEEECCCCCceEEEEEecCCHHHHHHHHHh
Confidence 011 13577899999998 5679999999999999999999999999999764
No 30
>PRK14322 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=4.3e-71 Score=567.33 Aligned_cols=373 Identities=24% Similarity=0.300 Sum_probs=304.4
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie 80 (461)
||++++++||+++|++|+++|.+|||+++|+++ +++ +|||||||||||++||||||+ ++|.++.++.++.+|
T Consensus 52 ~l~~a~~~gL~s~G~~V~~~g~~pTP~~~~av~------~~~-~gGI~ITaSHnP~~~nGiK~~-~~G~~i~~~~~~~ie 123 (429)
T PRK14322 52 SLEAAISAGLTSMGVDVLLCGILPTPAVALLTR------ITR-SFGVVISASHNPPEYNGIKVL-KGGYKIPDEMEVEIE 123 (429)
T ss_pred HHHHHHHHHHHHCCCeEEEecCcCHHHHHHHHh------ccC-CceEEEECCCCChHhCCEEEe-cCCCcCCHHHHHHHH
Confidence 689999999999999999999999999999986 344 899999999999999999999 899888777666665
Q ss_pred HHHhHHhhhhhccccccccc-CCCcEEEE-cchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhc
Q 012560 81 RAADIYKQFMVEGLTNLEKQ-TSTSIKRV-DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPL 158 (461)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~-~~~~i~~~-~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~l 158 (461)
+... +++++ +. ..+.+... +..+.|++.+.+.++. .+.+++|||+||+||+++.+++++|++|
T Consensus 124 ~~~~------~~~~~---~~~~~g~~~~~~~~~~~Y~~~l~~~v~~------~~~~~~kVvvD~~nG~~~~~~~~ll~~l 188 (429)
T PRK14322 124 ERIE------SGYFP---VRSVVGRTKSFREGRDMYIGAVLEMFRD------LDLTGEMVSLDLANGATTTTAKEVFEFL 188 (429)
T ss_pred HHHh------cCCCc---cccCceeEEeccchHHHHHHHHHHhhcc------cccCCCEEEEECCCChHHHHHHHHHHHc
Confidence 5321 12221 11 13555555 5788999999887742 1246899999999999999999999999
Q ss_pred CCCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHh
Q 012560 159 GAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEE 238 (461)
Q Consensus 159 g~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~~l~~ 238 (461)
||+++ .+|+.|||.||+..|.|+ +++.+.+.|+ ++|+|+++||||||++++|++|+++++|++++|++.++++.
T Consensus 189 g~~v~-~ln~~~dg~~~~~~~~~~---~l~~l~~~v~--~~dlGia~DgD~DR~~~vd~~G~~i~~d~~~~l~a~~l~~~ 262 (429)
T PRK14322 189 GAKVE-VFNDSQDGLLINQGCGAT---HPRFLAEEMK--NGKVGFTFDGDGDRVIAVDEERNVVNGDRIIGILAVGLKEE 262 (429)
T ss_pred CCEEE-EECCcCCCCCCCCCCCcC---CHHHHHHHHH--hcCEEEEEcCCCceEEEECCCCcEEChHHHHHHHHHHHHHh
Confidence 99988 588999999986554443 4566777777 46999999999999999999999999999999999999886
Q ss_pred CC--CCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecCCccCCcHHHHHH
Q 012560 239 HP--GTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMV 316 (461)
Q Consensus 239 ~~--~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~ 316 (461)
.+ ...||.+..||. +++.+++++|+++++||||++|++++|.+.+ .+||||+|||++|+++++.+||+++++
T Consensus 263 ~~~~~~~vV~~v~ss~-~l~~~a~~~g~~v~~t~vG~~~i~~~m~~~~-----~~~ggE~sG~~~~~~~~~~~Dgi~a~l 336 (429)
T PRK14322 263 GRLNSDTVVGTVMTNG-GLEDFLKERGIKLLRTKVGDKYVLEKMLESG-----ANLGGERSGHIIILDRSTTGDGLITAL 336 (429)
T ss_pred cCCCCCeEEEeecCch-HHHHHHHHcCCeEEEeCCccHHHHHHHhhcC-----cceeccCCceEEecCCCCCCcHHHHHH
Confidence 52 236776665555 6677889999999999999999999998755 469999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcccHHHHHhhccCCCccceeeeeecccCCcccCCccchhhHHHHHHHHhhhcCCCCCCCCCcc
Q 012560 317 KLLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVN 396 (461)
Q Consensus 317 ~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~ 396 (461)
++|++|+..+ ++|+++++++|.++... .+++ |+|. .+.++++|+++.+..
T Consensus 337 ~lle~la~~~--------~~Ls~l~~~lp~~~~~~---~~v~--~~~~-----~~~~~~~~~~~~~~~------------ 386 (429)
T PRK14322 337 ELMRVLKRSG--------RNLSDFAKEIPDYPQIT---KNVR--RTER-----MSLENENLRKIVEES------------ 386 (429)
T ss_pred HHHHHHHHhC--------CCHHHHHhhchhcCeee---eEee--eccc-----cccchHHHHHHHHHh------------
Confidence 9999987643 45999999999864322 2344 7661 122457777764321
Q ss_pred cCceEEEecCeEEEEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHhh
Q 012560 397 YEGVRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATK 444 (461)
Q Consensus 397 ~dGlki~~~~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v~ 444 (461)
..+++|+|||||||||+||||+||.|++.++++++.+.++|+
T Consensus 387 ------~~~g~w~lvRpS~teP~irv~~Ea~~~~~a~~l~~~~~~~l~ 428 (429)
T PRK14322 387 ------TSRGYRVVIRPSGTEPVVRITVEGKDREEIEKIVEEISRVLE 428 (429)
T ss_pred ------cCCCcEEEEccCCCCcEEEEEEEECCHHHHHHHHHHHHHHHh
Confidence 022579999999999999999999999999999999999885
No 31
>PRK14319 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=6.2e-70 Score=558.93 Aligned_cols=375 Identities=25% Similarity=0.308 Sum_probs=298.1
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie 80 (461)
||++|+++||+++|++|+++|.+|||+++|++. +.+.|||||||||||++||||||+. +|.+++++.++.+|
T Consensus 49 ~l~~a~~~gL~s~G~~V~d~g~~pTP~~~~~~~-------~~~~gGi~ItaSHnp~~~ngiK~~~-~G~~i~~~~~~~ie 120 (430)
T PRK14319 49 MLEAALVAGITSAGADVYRCGVLPTPALALITK-------LEDAAGVMISASHNPPEYNGLKVLM-RGYKLPDEVEERIE 120 (430)
T ss_pred HHHHHHHHHHHHCCCeEEEeCCcCcHHHHHHHh-------ccCceEEEEEeCCCChHHCCEEEec-CCCCCCHHHHHHHH
Confidence 689999999999999999999999999999664 2335999999999999999999995 78888887777776
Q ss_pred HHHhHHhhhhhcccccccccCCCcEEEE-cchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012560 81 RAADIYKQFMVEGLTNLEKQTSTSIKRV-DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (461)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~lg 159 (461)
+..+ .+.+.. ....+.+... +..+.|++.+.+.++. .+.+++|||+||+||+++.++|++|++||
T Consensus 121 ~~~~---~~~~~~-----~~~~g~~~~~~~~~~~Y~~~l~~~~~~------~~~~~~kvvvD~~nGa~~~~~~~ll~~Lg 186 (430)
T PRK14319 121 KEMN---EIHYSP-----YNEVGCVIDYKLAFEEYFNYIKQQYEG------LDLSGIKIVVDVANGATYELNPYILEYFG 186 (430)
T ss_pred HHHh---ccCCcc-----cccCeeEEeccchHHHHHHHHHHhcCc------cccCCCEEEEECCCChHHHHHHHHHHHcC
Confidence 5421 111110 0122444444 3678899999888741 23468999999999999999999999999
Q ss_pred CCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012560 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (461)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~~l~~~ 239 (461)
|+++ .+|+.|||.|+++.|.|+.+ +.+.+.+. ++|+|+++||||||++++|++|+++++|++++|+++++++..
T Consensus 187 ~~v~-~ln~~~dg~~~~~~~~~~~~---~~l~~~v~--~~dlGia~DgDaDR~~~vd~~G~~i~~d~~~~l~a~~ll~~~ 260 (430)
T PRK14319 187 AKVE-VVNNTPDGFNINVDCGSTHP---ENAKEKIT--NHKIAILHDGDGDRCIFLDEKGQEFHGDKIIGLTAKHLKKEG 260 (430)
T ss_pred CEEE-EECCCCCCCCCCCCCCCCCH---HHHHHHHH--hcCEEEEEcCCCceEEEECCCCCEeChhHHHHHHHHHHHHhC
Confidence 9998 58999999998777766554 44556663 469999999999999999999999999999999999998854
Q ss_pred C--CCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecCCccCCcHHHHHHH
Q 012560 240 P--GTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVK 317 (461)
Q Consensus 240 ~--~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ 317 (461)
+ +..||.+..||. .++.+++++|+++++||||++|++++|.+.+ .+||||+|||++|+++++.+||++++++
T Consensus 261 ~~~~~~vV~~v~ss~-~~~~~~~~~g~~v~~t~~G~~~i~~~m~~~~-----~~~ggE~sG~~~f~~~~~~~Dgi~a~l~ 334 (430)
T PRK14319 261 RLKNDVVVGTILSNM-GLEVFLKNNGIKVVRTKVGDRYVLEEMLKLN-----ATLGGERSGHIIYLDKSTTGDGLITALE 334 (430)
T ss_pred CCCCCeEEEeecCch-HHHHHHHHCCCcEEEeCCchHHHHHHHHHcC-----CEEEEcccceEEEhhccCCCcHHHHHHH
Confidence 3 235776666665 5567778899999999999999999999865 4699999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcccHHHHHhhccCCCccceeeeeecccCCcccCCccchhhHHHHHHHHhhhcCCCCCCCCCccc
Q 012560 318 LLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNY 397 (461)
Q Consensus 318 ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~ 397 (461)
++++|+..+ ++|+++++++|.++... .++.+. .+. .. + .+++.+ .+
T Consensus 335 lle~l~~~~--------~~ls~l~~~~p~~~~~~-~~v~~k--~~~-----~~--~---~~~~~~-------------~~ 380 (430)
T PRK14319 335 TLSVMVKSG--------KKLSDLSNEIPDYPQVM-INVKVK--NKE-----VY--K---HKEVFK-------------LI 380 (430)
T ss_pred HHHHHHHhC--------CCHHHHHhhccccceee-EEEEeC--Ccc-----cc--c---cHHHHH-------------HH
Confidence 999987653 45999999999864221 222221 110 00 0 011111 23
Q ss_pred CceEEEecCeEEEEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcCC
Q 012560 398 EGVRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFP 447 (461)
Q Consensus 398 dGlki~~~~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v~~~~ 447 (461)
||+ ++||+|||||||||++|||+||.|++.++++++.+.++|++|-
T Consensus 381 ~~~----~~gw~LiRpS~TeP~irv~~Ea~~~~~a~~l~~~~~~~v~~~~ 426 (430)
T PRK14319 381 KSI----KDYRVIVRPSGTEPVVRVLVEGPDEEYITNIANDIAGLIKELD 426 (430)
T ss_pred hCC----CCeEEEEecCCCccEEEEEEEeCCHHHHHHHHHHHHHHHHHhh
Confidence 553 3789999999999999999999999999999999999998774
No 32
>cd03084 phosphohexomutase The alpha-D-phosphohexomutase superfamily includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this family include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). These enzymes play important and diverse roles in carbohydrate metabolism in organisms from bacteria to humans. Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=100.00 E-value=2.6e-64 Score=506.05 Aligned_cols=339 Identities=32% Similarity=0.390 Sum_probs=278.9
Q ss_pred CchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHHHHHhHHhhhhhcccccccccCCC
Q 012560 24 STPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILERAADIYKQFMVEGLTNLEKQTST 103 (461)
Q Consensus 24 ~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie~~~~~~~~~~~~~~~~~~~~~~~ 103 (461)
-||.+.+.+.. -++..|||||||||||++||||||++++|.++.++.++.+|+... +++++.......+
T Consensus 15 itpe~~~~lg~-----a~g~~gGI~ITaSHnp~~~nGiK~~~~~G~~i~~~~~~~Ie~~~~------~~~~~~~~~~~~~ 83 (355)
T cd03084 15 ITPETAVALGQ-----AIGSTGGIMITASHNPPEDNGIKFVDPDGEPIASEEEKAIEDLAE------KEDEPSAVAYELG 83 (355)
T ss_pred CCHHHHHHHHH-----HHhcceeEEEEeCCCChhHCcEEEecCCCCcCCHHHHHHHHHHHh------cccccccccccCC
Confidence 35766554432 234469999999999999999999999999988887777765432 2211100000122
Q ss_pred c-EEEEcchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcCCCcccceecCCCCCCCCCCCCCC
Q 012560 104 S-IKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPE 182 (461)
Q Consensus 104 ~-i~~~~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~ 182 (461)
. +...++.+.|++++.+.++.+. ++.+++||++||+||+++.+++++|++|||+++ .+|+.|||.||.+.|+|.
T Consensus 84 ~~~~~~~~~~~Y~~~l~~~i~~~~----i~~~~~kvvvD~~~G~~~~~~~~ll~~lg~~v~-~~n~~~d~~F~~~~p~p~ 158 (355)
T cd03084 84 GSVKAVDILQRYFEALKKLFDVAA----LSNKKFKVVVDSVNGVGGPIAPQLLEKLGAEVI-PLNCEPDGNFGNINPDPG 158 (355)
T ss_pred CeEEEcCCHHHHHHHHHHhcChhh----hccCCCEEEEECCCchHHHHHHHHHHHcCCcEE-EEcCcCCCCCCCCCCCCC
Confidence 2 3445788999999999886433 245799999999999999999999999999998 589999999999999999
Q ss_pred chHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHh-CCCCeEEEeccCChhHHHHHHHH
Q 012560 183 DKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEE-HPGTTIVTDSVTSDGLTTFIEKK 261 (461)
Q Consensus 183 ~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~~l~~-~~~~~vv~~~~ss~~~~~~ia~~ 261 (461)
.+++++.+.+.|++.++|+|+++||||||+.++|++|+++++|++++|+++++++. .++..||.+.. |+.+++.++++
T Consensus 159 ~~~~l~~l~~~v~~~~adlG~a~DgDgDRl~~vd~~G~~l~~d~~~al~~~~l~~~~~~~~~vv~~v~-ss~~i~~ia~~ 237 (355)
T cd03084 159 SETNLKQLLAVVKAEKADFGVAFDGDADRLIVVDENGGFLDGDELLALLAVELFLTFNPRGGVVKTVV-SSGALDKVAKK 237 (355)
T ss_pred chhhHHHHHHHHHhcCCCEEEEEcCCCceeEEECCCCceeCHhHHHHHHHHHHHHhcCCCCCEEEEcc-chHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999865 34455775554 55577889999
Q ss_pred cCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecCCccCCcHHHHHHHHHHHHHHHHHcCCCCCcccHHHHH
Q 012560 262 LGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVKLLNKLASARAAGRGGGSKVLTDLV 341 (461)
Q Consensus 262 ~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll 341 (461)
+|++++|||||++|++++|.+.+ ++||||+|||++|+++.+.+|||++++++|++|+..+ ++|++++
T Consensus 238 ~g~~v~~t~~G~~~i~~~m~~~~-----~~~ggE~sg~~~~~~~~~~~Dgi~a~l~~le~la~~~--------~~Ls~l~ 304 (355)
T cd03084 238 LGIKVIRTKTGFKWVGEAMQEGD-----VVLGGEESGGVIFPEFHPGRDGISAALLLLEILANLG--------KSLSELF 304 (355)
T ss_pred cCCcEEEecCcHHHHHHHHHhcC-----ceEEecCcCCEEECCcCCCCCHHHHHHHHHHHHHHhC--------CCHHHHH
Confidence 99999999999999999998754 5799999999999999999999999999999887653 4599999
Q ss_pred hhccCCCccceeeeeecccCCcccCCccchhhHHHHHHHHhhhcCCCCCCCCCcccCceEEEecCeEEEEEecCCCceeE
Q 012560 342 DGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYEGVRVSGSGGWFLLRLSLHDPVLP 421 (461)
Q Consensus 342 ~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~dGlki~~~~~w~liRpSgTeP~ir 421 (461)
+++|.++..+ . .+. ||+|||||||||++|
T Consensus 305 ~~~p~~~~~~-----------~-----------------------------~v~-----------gW~lirps~tep~~r 333 (355)
T cd03084 305 SELPRYYYIR-----------L-----------------------------KVR-----------GWVLVRASGTEPAIR 333 (355)
T ss_pred HHhhHhcccc-----------c-----------------------------ccc-----------eEEEEecCCCCcEEE
Confidence 9999753210 0 000 899999999999999
Q ss_pred EEEeeCCHHHHHHHHHHHHHHh
Q 012560 422 LNIEAPSREDAVKLGLAVAAAT 443 (461)
Q Consensus 422 vy~Ea~~~~~a~~l~~~~~~~v 443 (461)
||+||.|+++++++++.+.+.+
T Consensus 334 i~~Ea~~~e~a~~l~~~~~~~~ 355 (355)
T cd03084 334 IYAEADTQEDVEQIKKEARELV 355 (355)
T ss_pred EEEeeCCHHHHHHHHHHHHhhC
Confidence 9999999999999999887753
No 33
>KOG1220 consensus Phosphoglucomutase/phosphomannomutase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-63 Score=495.10 Aligned_cols=407 Identities=32% Similarity=0.369 Sum_probs=310.1
Q ss_pred HHHHHHHHHHhCCCcEEEeC-CCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCC-CCHHHHHHH
Q 012560 2 LQDAVSRGITGAGLDVVQYG-LASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGL-GKPDIKDIL 79 (461)
Q Consensus 2 l~~a~~~gL~s~Gi~V~~~g-~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~-~~~~~~~~i 79 (461)
|+++++++|..+|++|++++ .+|||++.|++. .|+|++||||||||||++|||+|+|+++|+| ++|+.+++.
T Consensus 118 fA~l~a~vf~~~g~~v~lf~~~v~TP~vpfav~------~l~~dAgIMiTASHnPk~dNGyKvYwsNG~qii~PhD~~I~ 191 (607)
T KOG1220|consen 118 FAELVAAVFLLNGFKVYLFSELVPTPFVPFAVL------TLGADAGIMITASHNPKEDNGYKVYWSNGAQIISPHDEKIS 191 (607)
T ss_pred HHHHHHHHHHhCCceEEEeccccCCCcchhHHH------HhccCceEEEeccCCccccCCEEEEecCCccccCchhHHHH
Confidence 68999999999999999997 999999999997 5899999999999999999999999999985 677777777
Q ss_pred HHHHhHHhhhh--hcccccccccCCCcEEEE-cchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHh
Q 012560 80 ERAADIYKQFM--VEGLTNLEKQTSTSIKRV-DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLE 156 (461)
Q Consensus 80 e~~~~~~~~~~--~~~~~~~~~~~~~~i~~~-~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~ 156 (461)
+.+...++... |++ ..+ ...+..-... -..+.|++.+.+.+..-.- +....+++++||+++||+|+.++..+|+
T Consensus 192 ~~~~~nl~p~~s~wd~-slv-~s~~l~~d~~~~~~~~~~e~~k~~l~~~~~-e~n~~s~~~fVyta~hGvG~~F~~~al~ 268 (607)
T KOG1220|consen 192 DSIEANLEPRLSSWDD-SLV-KSHPLLHDILAVIIPPYFEVYKELLPCFHR-EANPLSGLKFVYTAGHGVGGFFVKKALE 268 (607)
T ss_pred HHHHhccCcccchhhh-hHH-hcchhhcCchhccchHHHHHHHhcCccHhh-hhccCCCceEEEecCCCccHHHHHHHHH
Confidence 66544332111 111 000 0000000111 1456688887775542211 1235688999999999999999999999
Q ss_pred hcCCCc--ccceecCCCCCCCC-CCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcC---CCccccchhHHHH
Q 012560 157 PLGAKT--SGSQFLEPDGMFPN-HIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDS---TGHELNRNRLIAL 230 (461)
Q Consensus 157 ~lg~~v--~~~~~~~~d~~f~~-~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~---~G~~l~~d~~~~L 230 (461)
++||.. ....+++|||.||+ +.||||++.+|+...+.+.++++|+++++|||+||+++++. +|+.+++|+++||
T Consensus 269 ~~~~~~~~~v~eq~~Pdp~FPt~~~PNPEek~aL~ls~~~a~~n~~dlvlanDpDaDR~avaek~~G~wr~fnGNElgAL 348 (607)
T KOG1220|consen 269 KLGLDTMISVPEQLEPDPMFPTVPFPNPEEKGALDLSIKAALKNSADLVLANDPDADRFAVAEKVSGEWRVFNGNELGAL 348 (607)
T ss_pred HhCCCccccchhhcCCCCCCCCCCCCCcchHHHHHHHHHHHhccCCcEEEecCCCcchhhheeccCCcceeccchHHHHH
Confidence 999986 23467899999999 78999999999999999999999999999999999999976 8999999999999
Q ss_pred HHHHHHHhCCCCeEE-----EeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecCC
Q 012560 231 MSAIVLEEHPGTTIV-----TDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKEN 305 (461)
Q Consensus 231 ~~~~~l~~~~~~~vv-----~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~ 305 (461)
+++++++.+++...+ .+...|+.+.+.||+..|++..+|.||||||++++.+.+..|++++|++|||+||.+...
T Consensus 349 l~~~~le~~k~~~~~~~~~ml~s~vSs~l~~~ia~~eGf~~~~tltGFKwvgnrAieL~k~G~~v~fA~Ees~gym~g~~ 428 (607)
T KOG1220|consen 349 LSWWVLEEHKGSTPVQDVSMLNSTVSSGLTRFIAEIEGFHHEETLTGFKWVGNRAIELEKDGKEVHFAFEESIGYMFGEN 428 (607)
T ss_pred HHHHHHHhccCCCccchhhhhhhHHHHHHHHHHHHHhCceeeeccccchhhhHHHHHHHhcCceeeeeehhhcCcccccC
Confidence 999999999877655 344556678899999999999999999999999999999999999999999999999999
Q ss_pred ccCCcHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCCccceeeeeecccCCcccCCccchhhHHHHHHHHhhhc
Q 012560 306 HWLDDGAYLMVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVD 385 (461)
Q Consensus 306 ~~~~Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~ 385 (461)
++.+||+++++.++.+++.....++.+ |++.+.++.+.|..+.....+- .|+. .+....+.+.|++...
T Consensus 429 ~~dkDGv~a~v~~a~~~~~lr~~~~~s----l~e~l~~l~e~yg~~~~~~~y~-l~~~------pe~~~~lf~~lR~~~~ 497 (607)
T KOG1220|consen 429 HLDKDGVSAAVKFASMACRLRLAGNLS----LSEVLEDLYERYGYHSTANSYR-LCID------PEVIKALFDGLRNYDT 497 (607)
T ss_pred ccCcchHHHHHHHHHHHHHHHHhcCCC----HHHHHHHHHHhhCccceeeEEE-EecC------CchhHHHHHHHhhccc
Confidence 999999999999988887765555544 9999999888764322111111 0322 0112233333333211
Q ss_pred ------CC-------------CCCCC--------CCcccCceEEE--e-cCeEEEEEecCCCceeEEEEeeCC
Q 012560 386 ------SD-------------PKLQK--------APVNYEGVRVS--G-SGGWFLLRLSLHDPVLPLNIEAPS 428 (461)
Q Consensus 386 ------~~-------------~~~~~--------~~~~~dGlki~--~-~~~w~liRpSgTeP~irvy~Ea~~ 428 (461)
.. .|+.. -.....+..|. + +++|+.+|-|+|||++++|+|+..
T Consensus 498 ~~~yp~~ig~e~ev~~~rdlT~g~d~s~~d~ka~lpv~~ss~~vTf~~~~~~~~tlR~SgtePkik~yie~c~ 570 (607)
T KOG1220|consen 498 GYIYPKKIGEEFEVVNVRDLTTGYDVSSPDHKAVLPVSTSSQMVTFTFNNGGVVTLRTSGTEPKIKLYIEACL 570 (607)
T ss_pred cccccchhcccceeeeeeeceeeeecCCCCCccccccccccceeEEeccCcEEEEEecCCCCcchhhhHHhhC
Confidence 00 01100 00112344444 3 468999999999999999999943
No 34
>cd03086 PGM3 PGM3 (phosphoglucomutase 3), also known as PAGM (phosphoacetylglucosamine mutase) and AGM1 (N-acetylglucosamine-phosphate mutase), is an essential enzyme found in eukaryotes that reversibly catalyzes the conversion of GlcNAc-6-phosphate into GlcNAc-1-phosphate as part of the UDP-N-acetylglucosamine (UDP-GlcNAc) biosynthetic pathway. UDP-GlcNAc is an essential metabolite that serves as the biosynthetic precursor of many glycoproteins and mucopolysaccharides. AGM1 is a member of the alpha-D-phosphohexomutase superfamily, which catalyzes the intramolecular phosphoryl transfer of sugar substrates. The alpha-D-phosphohexomutases have four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=100.00 E-value=3.6e-57 Score=468.25 Aligned_cols=368 Identities=18% Similarity=0.157 Sum_probs=267.5
Q ss_pred CeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHHHHHhHHh--------hhh------h--c---c--ccccccc--
Q 012560 44 DGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILERAADIYK--------QFM------V--E---G--LTNLEKQ-- 100 (461)
Q Consensus 44 ~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie~~~~~~~--------~~~------~--~---~--~~~~~~~-- 100 (461)
.+||||||||||++|||||++.++|.++.++..+.++....... .+. . . . +....|.
T Consensus 36 ~~gimITaSHNP~~~NGiK~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~vg~D~R~ss 115 (513)
T cd03086 36 TIGVMITASHNPVEDNGVKIVDPDGEMLEESWEPYATQLANASDDELLVLVLMLISVKELNIDLSVPANVFVGRDTRPSG 115 (513)
T ss_pred ceEEEECCCcCCcccCeEEEEcCCCCCCCHHHHHHHHHHhhCCCHHHHHHHHHHHhhhhhccCCCCCCEEEEEeCCChhH
Confidence 68999999999999999999999999887775554544321100 000 0 0 0 0000000
Q ss_pred ------------CCC-cEEE---------------E--------cchHHHHHHHHHHHHhhcC-CCCCCCCCcEEEEeCC
Q 012560 101 ------------TST-SIKR---------------V--------DYMSVYTSDLVKAVRRAAG-DIEKPLEGFHIVVDAG 143 (461)
Q Consensus 101 ------------~~~-~i~~---------------~--------~~~~~Y~~~l~~~i~~~~~-~~~~~~~~lkVvvd~~ 143 (461)
..| .+.. . ...+.|++++...+..-.. ...++.+++|||+||+
T Consensus 116 ~~l~~a~~~gl~~~G~~V~d~g~~~TP~~~~~v~~~~~~g~~~~~~~~~Y~~~l~~~f~~lv~~~~~~~~~~~kVvvD~a 195 (513)
T cd03086 116 PALLQALLDGLKALGGNVIDYGLVTTPQLHYLVRAANTEGAYGEPTEEGYYEKLSKAFNELYNLLQDGGDEPEKLVVDCA 195 (513)
T ss_pred HHHHHHHHHHHHHCCCeEEEccCcCcHHHHHHHHhcCCCCccCCccHHHHHHHHHHHHHHHHhhccccccCCCEEEEECC
Confidence 000 0000 0 1136688888877432221 1223467899999999
Q ss_pred CCCchHHHHHHHhhcC--CCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcC----CcEEEeeCCCCceeEEEcC
Q 012560 144 NGAGGFFAAKVLEPLG--AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNK----ADLGIIFDTDVDRSAAVDS 217 (461)
Q Consensus 144 ~G~~~~~~~~ll~~lg--~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~----adlgia~D~DgDR~~~vd~ 217 (461)
||+++.+++++|+.|| |+++ .+|++|||.| +.|+|-.+++++.+++.+++.+ +|+|+++||||||++++|+
T Consensus 196 NGag~~~~~~ll~~Lg~~~~v~-~in~~~dg~~--~~n~~~ga~~l~~l~~~v~~~~~~~~adlgiA~DGDADRl~~vd~ 272 (513)
T cd03086 196 NGVGALKLKELLKRLKKGLSVK-IINDGEEGPE--LLNDGCGADYVKTKQKPPRGFELKPPGVRCCSFDGDADRLVYFYP 272 (513)
T ss_pred CcHHHHHHHHHHHHcCCCcEEE-EEccCCCCcc--cCCCCcccccHHHHHHHHHhcCCCCCccEEEEECCCCCcEEEEEe
Confidence 9999999999999999 9998 5899999986 2222222466888888888876 9999999999999999999
Q ss_pred CC----ccccchhHHHHHHHHHHHhCC-----CC---eEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcc
Q 012560 218 TG----HELNRNRLIALMSAIVLEEHP-----GT---TIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNS 285 (461)
Q Consensus 218 ~G----~~l~~d~~~~L~~~~~l~~~~-----~~---~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~ 285 (461)
+| +++++|++++|+++++++..+ +. .||.+..||..+.+.+.+.+|+++++|+|||||+.++|.+.+.
T Consensus 273 ~g~~~~~~l~GD~i~aL~a~~ll~~~~~~~~~~~~~~~VV~tv~sn~~~~~~l~~~~G~~~~~t~vG~k~v~~~m~e~~~ 352 (513)
T cd03086 273 DSSNKFHLLDGDKIATLFAKFIKELLKKAGEELKLTIGVVQTAYANGASTKYLEDVLKVPVVCTPTGVKHLHHAAEEFDI 352 (513)
T ss_pred cCCCceEEECHHHHHHHHHHHHHHhccccCCCCCCCcEEEEEeccchHHHHHHHHHcCceEEEeCCcHHHHHHHHHHhCc
Confidence 88 999999999999999987422 21 6888888888888888776899999999999999999998763
Q ss_pred cCCcceeEeeeecc--eeecCC------------------------------ccCCcHHHHHHHHHHHHHHHHHcCCCCC
Q 012560 286 IGEESHLAIETSGH--GALKEN------------------------------HWLDDGAYLMVKLLNKLASARAAGRGGG 333 (461)
Q Consensus 286 ~g~~~~~g~E~sG~--~~~~~~------------------------------~~~~Dgi~aa~~ll~~l~~~~~~~~~~~ 333 (461)
.+|||+||| ++|+++ ...+||+++++++++.|+..+
T Consensus 353 -----~~ggE~sGHgtvif~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~n~~~gDgi~~al~vl~~l~~~~------- 420 (513)
T cd03086 353 -----GVYFEANGHGTVLFSESALAKIEENSSLSDEQEKAAKTLLAFSRLINQTVGDAISDMLAVELILAALG------- 420 (513)
T ss_pred -----ceEEeccCCEEEEECchHHhhhhhhccccchhhhHHHHHHHHHHhhCCCCcHHHHHHHHHHHHHHHhC-------
Confidence 699999999 899997 558999999999988876542
Q ss_pred cccHHHHHhhccCCCccceeeeeecccCCcccCCccchhhHHHHHHHHhhhcCCCCCCCCCcccCceEEEecCeEEEEEe
Q 012560 334 SKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYEGVRVSGSGGWFLLRL 413 (461)
Q Consensus 334 ~~~Ls~ll~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~dGlki~~~~~w~liRp 413 (461)
++|+++++.++.+.. ...++.+. .+. +.++.+. ....... ...++.+||+++.+++||++|||
T Consensus 421 -~~lsel~~~y~~~p~-~~~~v~v~--~~~---------~~~~~~~-e~~~~~p---~~l~~~iDG~~~~~~~gr~lVRp 483 (513)
T cd03086 421 -WSPQDWDNLYTDLPN-RQLKVKVP--DRS---------VIKTTDA-ERRLVEP---KGLQDKIDAIVAKYNNGRAFVRP 483 (513)
T ss_pred -CCHHHHHhhchhcCe-eeeEEEec--Ccc---------chhhhhH-Hhhcccc---HHHHHHHHHHHhcCCCeeEEEec
Confidence 459999997765421 12223332 110 1111111 1100000 00145689999998899999999
Q ss_pred cCCCceeEEEEeeCCHHHHHHHHHHHHHHh
Q 012560 414 SLHDPVLPLNIEAPSREDAVKLGLAVAAAT 443 (461)
Q Consensus 414 SgTeP~irvy~Ea~~~~~a~~l~~~~~~~v 443 (461)
|||||++|||+||.|++.++++++.+.+.|
T Consensus 484 SGTEp~iRvyaEA~t~~~~~~l~~~i~~~v 513 (513)
T cd03086 484 SGTEDVVRVYAEAATQEEADELANEVAELV 513 (513)
T ss_pred CCCCcEEEEEEEeCCHHHHHHHHHHHHhhC
Confidence 999999999999999999999998887754
No 35
>PLN02895 phosphoacetylglucosamine mutase
Probab=100.00 E-value=7.4e-51 Score=419.31 Aligned_cols=390 Identities=19% Similarity=0.198 Sum_probs=276.7
Q ss_pred HHHHHHHHhCCCcEEEe-CCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHHHH
Q 012560 4 DAVSRGITGAGLDVVQY-GLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILERA 82 (461)
Q Consensus 4 ~a~~~gL~s~Gi~V~~~-g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie~~ 82 (461)
|+-+..|.+.|++|..+ ...|| ++++.+||||||||||++|||+|+++++|.++..++++.....
T Consensus 32 R~~a~~l~~~~~r~~~~~~~r~~--------------~~~~~~gVmITaSHnp~~~nG~K~~~~~G~~~~~~~e~~a~~l 97 (562)
T PLN02895 32 RTDASLLESTVFRVGILAALRSL--------------KTGAATGLMITASHNPVSDNGVKIVDPSGGMLPQAWEPFADAL 97 (562)
T ss_pred HHHHHHHHhcCeEEEEeCCCCcc--------------ccCCCcEEEEeCCCCCcccCcEEEECCCCCcCCHHHHHHHHHH
Confidence 56788999999999987 44444 1257899999999999999999999999998877644443332
Q ss_pred HhH---------Hhhhhh-cccc-------------ccccc--------------CCC-cEEE-----------------
Q 012560 83 ADI---------YKQFMV-EGLT-------------NLEKQ--------------TST-SIKR----------------- 107 (461)
Q Consensus 83 ~~~---------~~~~~~-~~~~-------------~~~~~--------------~~~-~i~~----------------- 107 (461)
.+- .+.+.. +.+. ...|. ..+ .+..
T Consensus 98 aN~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~V~vG~DtR~Ss~~l~~a~~~gl~~~G~~v~d~G~~tTP~l~~~v~~~n 177 (562)
T PLN02895 98 ANAPDPDALVQLIREFVKKENIPAVGGNPPAEVLLGRDTRPSGPALLAAALKGVRAIGARAVDMGILTTPQLHWMVRAAN 177 (562)
T ss_pred hCCCCHHHHHHHHHHHHHHhCCCccccCcCCEEEEEecCCCCHHHHHHHHHHHHHHCCCCEEEeCcCCcHHHHHHHHhcC
Confidence 210 000000 0000 00000 000 0100
Q ss_pred ---EcchHHHHHHHHHHHHhhcCCCCC----CCCCcEEEEeCCCCCchHHHHHHHhhcCCCcccceecCCCCCCCCCCCC
Q 012560 108 ---VDYMSVYTSDLVKAVRRAAGDIEK----PLEGFHIVVDAGNGAGGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPN 180 (461)
Q Consensus 108 ---~~~~~~Y~~~l~~~i~~~~~~~~~----~~~~lkVvvd~~~G~~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~ 180 (461)
....+.|.+.+.+.+..-...... ...+.||+|||+||+++..++++++.||+.++..+|+.+||.| +.++
T Consensus 178 ~~~~~~e~~Y~~~l~~~f~~l~~~~~~~~~~~~~~~kvvVDcANGvg~~~~~~l~~~Lg~~~i~~iN~~~dG~~--~lN~ 255 (562)
T PLN02895 178 KGMKATESDYFEQLSSSFRALLDLIPNGSGDDRADDKLVVDGANGVGAEKLETLKKALGGLDLEVRNSGKEGEG--VLNE 255 (562)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHhcCCCccccccCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEeecCCCCCC--CCCC
Confidence 012466999888877654321111 1223689999999999999999999999988745788999886 3333
Q ss_pred CCchHHHHHHHHHHHhcCC---cEE---EeeCCCCceeEEEcCCC-----ccccchhHHHHHHHHHHHhC----------
Q 012560 181 PEDKTAMKAIIQAVLDNKA---DLG---IIFDTDVDRSAAVDSTG-----HELNRNRLIALMSAIVLEEH---------- 239 (461)
Q Consensus 181 P~~~~~l~~l~~~v~~~~a---dlg---ia~D~DgDR~~~vd~~G-----~~l~~d~~~~L~~~~~l~~~---------- 239 (461)
|-.++.++.++ .+.+ ++ |+| +++||||||++++|++| ++|+||++++|++.++.+..
T Consensus 256 ~cGad~v~~lq-~vp~-~~~~~d~G~~~~sfDGDADRlv~~d~~g~~~~~~llDGDkI~~L~A~~l~~~l~~~~~~~~~~ 333 (562)
T PLN02895 256 GVGADFVQKEK-VPPT-GFASKDVGLRCASLDGDADRLVYFYVSSAGSKIDLLDGDKIASLFALFIKEQLRILNGNGNEK 333 (562)
T ss_pred CCccCcHHHHH-hhhc-cCCccCCCCcceEEcCCCCEEEEEEcCCCcccCeEeCHHHHHHHHHHHHHHHhhhcccccccc
Confidence 33334566666 6666 77 899 99999999999999988 89999999999999987652
Q ss_pred C-----CCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecc--eeecCCcc-----
Q 012560 240 P-----GTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGH--GALKENHW----- 307 (461)
Q Consensus 240 ~-----~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~--~~~~~~~~----- 307 (461)
+ +.+||.+..+|..+.+++.+.+|+++++||||.||+.++|.+.+ ..+|||.||| ++|+++..
T Consensus 334 ~~~~~l~~gVVqTayaNgast~yl~~~lg~~v~~t~tGvk~l~~~a~e~d-----igvyfEaNGHGTviFs~~~~~~~~~ 408 (562)
T PLN02895 334 PEELLVRLGVVQTAYANGASTAYLKQVLGLEVVCTPTGVKYLHEAAAEFD-----IGVYFEANGHGTVLFSERFLDWLEA 408 (562)
T ss_pred cccccCCCeEEEeccccHHHHHHHHHhcCCeEEEEeCchHHHHHHHHhcC-----ceEEEccCCCeEEEEChHHHHHHhh
Confidence 2 33699999999999888866589999999999999999999876 3699999999 88887655
Q ss_pred -------------------------------CCcHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhh---ccCCCcccee
Q 012560 308 -------------------------------LDDGAYLMVKLLNKLASARAAGRGGGSKVLTDLVDG---LEEPGFAVEL 353 (461)
Q Consensus 308 -------------------------------~~Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~---lp~~~~~~~~ 353 (461)
..|||+.++++++.|...+ ++++++++. +|.++ .
T Consensus 409 ~~~~~~~~~~~~~~~~a~~~L~~~~~linq~vGDai~~~L~vl~iL~~~~--------~sl~e~~~~y~dlP~~~----~ 476 (562)
T PLN02895 409 AAAELSSKAKGSEAHKAARRLLAVSRLINQAVGDALSGLLLVEAILQYRG--------WSLAEWNALYQDLPSRQ----L 476 (562)
T ss_pred hhhccccccccchhhHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHhC--------CCHHHHHhhCccCCcee----E
Confidence 6999999988877776542 459999994 44432 2
Q ss_pred eeeecccCCcccCCccchhhHHHH--HHHHhhhcCCCCCCCCCcccCceEE-EecCeEEEEEecCCCceeEEEEeeCCHH
Q 012560 354 RLKIDQNHSDLKGGSFRDYGEAVL--KHLENRVDSDPKLQKAPVNYEGVRV-SGSGGWFLLRLSLHDPVLPLNIEAPSRE 430 (461)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~v~--~~l~~~~~~~~~~~~~~~~~dGlki-~~~~~w~liRpSgTeP~irvy~Ea~~~~ 430 (461)
++.+...+- .+ ..+....++ +.|. ..+| .++ .+++||++||||||||++|||+||.+++
T Consensus 477 kv~V~dr~~-~~---t~~~e~~~v~P~~Lq-------------~~ID-~~v~~~~~Gr~lvRpSGTEp~vRv~~Ea~t~~ 538 (562)
T PLN02895 477 KVKVADRTA-IT---TTDAETVVVRPAGLQ-------------DAID-AEVAKYPRGRAFVRPSGTEDVVRVYAEASTQE 538 (562)
T ss_pred eeEEccCcc-cc---ccchhhhcccHHHHH-------------HHHH-HHhcccCCceEEEEcCCCCcEEEEEEEECCHH
Confidence 222321000 00 001011122 2232 2234 445 4678999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcC
Q 012560 431 DAVKLGLAVAAATKEF 446 (461)
Q Consensus 431 ~a~~l~~~~~~~v~~~ 446 (461)
.+++++..+.+.|+++
T Consensus 539 ~~~~l~~~v~~~v~~~ 554 (562)
T PLN02895 539 AADSLAREVARLVYDL 554 (562)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999764
No 36
>PTZ00302 N-acetylglucosamine-phosphate mutase; Provisional
Probab=100.00 E-value=6.8e-51 Score=422.73 Aligned_cols=371 Identities=20% Similarity=0.234 Sum_probs=265.1
Q ss_pred CCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHHHHHhHH---------hhhhhc-c--cc---------------
Q 012560 43 VDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILERAADIY---------KQFMVE-G--LT--------------- 95 (461)
Q Consensus 43 a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie~~~~~~---------~~~~~~-~--~~--------------- 95 (461)
+.+||||||||||++|||+|+++++|+++.++.+..++...+.. ..+..+ . +.
T Consensus 75 ~~~GImiTASHNp~~~NG~K~~~~~G~~l~~~~~~~i~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (585)
T PTZ00302 75 KSVGVMITASHNPIQDNGVKIIDPDGGMLEESWEKICTDFANARTGEDLVSVLMDCLTEHGIKLSNLKLDLNKSNCSKAK 154 (585)
T ss_pred cceeEEEeCCCCCcccCCEEEECCCCCcCCCcHHHHHHHHHhccCHHHHHHHHHHHHHHhCCCccccccccccccCCCCE
Confidence 78999999999999999999999999998777666665433210 000000 0 00
Q ss_pred ----ccccc---------------CCC-cEEEE------------------------cchHHHHHHHHHHHHhhcCCCCC
Q 012560 96 ----NLEKQ---------------TST-SIKRV------------------------DYMSVYTSDLVKAVRRAAGDIEK 131 (461)
Q Consensus 96 ----~~~~~---------------~~~-~i~~~------------------------~~~~~Y~~~l~~~i~~~~~~~~~ 131 (461)
...|. ..+ .+..+ ...+.|++.+...+..-......
T Consensus 155 V~vGrDtR~Ss~~L~~al~~gl~~~~G~~v~d~G~~tTP~l~y~v~~~n~~~~~~~~~~e~~Y~~~~~~~f~~l~~~~~~ 234 (585)
T PTZ00302 155 VHVGRDTRPSSPELVSALLRGLKLLIGSNVRNFGIVTTPQLHFLVAFANGLGVDVVESSDELYYAYLLAAFKELYRTLQE 234 (585)
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHHhcCCcEEEeCCCCcHHHHHHHHHhCCCccccCCCcHHHHHHHHHHHHHHHHhhCCc
Confidence 00000 000 11110 12356888888776543321110
Q ss_pred C-------CCCcEEEEeCCCCCchHHHHHHHhhc---CCCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcE
Q 012560 132 P-------LEGFHIVVDAGNGAGGFFAAKVLEPL---GAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADL 201 (461)
Q Consensus 132 ~-------~~~lkVvvd~~~G~~~~~~~~ll~~l---g~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adl 201 (461)
. ...-+|+|||+||+++..++++|+.| ||+++ .+|+.+|+.| +.++|-.++.++.+++.++..++|+
T Consensus 235 ~~~~~~~~~~~~kVvVD~ANGvg~~~~~~ll~~L~~~g~~v~-~in~~~dg~~--~lN~~cGad~vk~lq~~p~~~~ad~ 311 (585)
T PTZ00302 235 GGPVDLTQNNSKILVVDCANGVGGYKIKRFFEALKQLGIEII-PININCDEEE--LLNDKCGADYVQKTRKPPRAMKEWP 311 (585)
T ss_pred cccccccccCCCeEEEECCCcHHHHHHHHHHHHhhhCCCEEE-EEecCCCCCC--CCCCCCccccHHHHHHHHHhcCCCc
Confidence 0 11258999999999999999999999 78887 5888899876 3333333466888999999999999
Q ss_pred E------EeeCCCCceeEEEcC--CC----ccccchhHHHHHHHHHHHh--C--CCC----eEEEeccCChhHHHHHHHH
Q 012560 202 G------IIFDTDVDRSAAVDS--TG----HELNRNRLIALMSAIVLEE--H--PGT----TIVTDSVTSDGLTTFIEKK 261 (461)
Q Consensus 202 g------ia~D~DgDR~~~vd~--~G----~~l~~d~~~~L~~~~~l~~--~--~~~----~vv~~~~ss~~~~~~ia~~ 261 (461)
| +++||||||++++|+ +| ++|+||++++|++.++.+. . .+. +||.+..+|..+.+++.+.
T Consensus 312 G~~~~~~~sfDGDADRlv~~d~~~~g~~~~~lldGDkI~~L~A~~l~~~l~~~~~~~~l~igVVqTayaNgast~yl~~~ 391 (585)
T PTZ00302 312 GDEETRVASFDGDADRLVYFFPDKDGDDKWVLLDGDRIAILYAMLIKKLLGKIQLKKKLDIGVVQTAYANGASTNYLNEL 391 (585)
T ss_pred CccCCeeEEECCCCCeEEEEEecCCCCccceecCHHHHHHHHHHHHHHHhhhcCCCCCccceEEEeccCCHHHHHHHHHh
Confidence 9 999999999999998 78 9999999999999998763 2 233 6999999999999988775
Q ss_pred cC-CeEEEEecchHHHHHHHHHhcccCCcceeEeeeecc--eeecC------------------------------CccC
Q 012560 262 LG-GKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGH--GALKE------------------------------NHWL 308 (461)
Q Consensus 262 ~g-~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~--~~~~~------------------------------~~~~ 308 (461)
+| +++++||||.||+.++|.+.+ ..+|||.||| ++|++ +...
T Consensus 392 lg~~~v~~t~tGvk~l~~~a~e~d-----i~iyfEaNGHGTvif~~~~~~~~~~~~~~~~~~~~a~~~L~~~~~l~n~~v 466 (585)
T PTZ00302 392 LGRLRVYCAPTGVKNLHPKAHKYD-----IGIYFEANGHGTVLFNEKALAEWAKFLAKQNALNSACRQLEKFLRLFNQTI 466 (585)
T ss_pred cCCeeEEEEeCchHHHHHHHHhcC-----CeEEEccCCCEEEEECcHHHhhhhhhccccchhhhHHHHHHHhHhhhcCCC
Confidence 89 999999999999999999876 3699999999 78888 5667
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCCccceeeeeecccCCcccCCccchhhHHHH--HHHHhhhcC
Q 012560 309 DDGAYLMVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVL--KHLENRVDS 386 (461)
Q Consensus 309 ~Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~l~~~~~~ 386 (461)
.|||+.++++++.|+..+ ++++++++.++.. .....++.++. +. .....+....++ +.|++
T Consensus 467 GDai~~~L~v~~iL~~~~--------~sl~e~~~~y~dl-P~~~~kv~v~~--r~--~i~t~d~e~~~v~P~~Lq~---- 529 (585)
T PTZ00302 467 GDAISDLLAVELALAFLG--------LSFQDWLNLYTDL-PSRQDKVTVKD--RT--LITNTEDETRLLEPKGLQD---- 529 (585)
T ss_pred ccHHHHHHHHHHHHHhhC--------CCHHHHHhhcccC-CceeeeeEecc--Cc--ccccchHhhhcccHHHHHH----
Confidence 999999998878776542 4599999954331 01122233321 10 000001111122 33332
Q ss_pred CCCCCCCCcccCceEEEe-cCeEEEEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcCC
Q 012560 387 DPKLQKAPVNYEGVRVSG-SGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFP 447 (461)
Q Consensus 387 ~~~~~~~~~~~dGlki~~-~~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v~~~~ 447 (461)
.+|++.+.+ ++||++||||||||++|||+||.+++.++++++.+.+.|+++.
T Consensus 530 ---------~id~~~~~~~~~gr~lvRpSGTEp~vRvyaEA~t~~~a~~l~~~v~~~v~~~~ 582 (585)
T PTZ00302 530 ---------KIDAIVSKYDNAARAFIRPSGTEPVVRVYAEAPTLEQADELANEVKGLVLRYC 582 (585)
T ss_pred ---------HHHHHHhhccCCceEEEEcCCCCcEEEEEEEECCHHHHHHHHHHHHHHHHHHh
Confidence 133334456 7899999999999999999999999999999999999998654
No 37
>COG0033 Pgm Phosphoglucomutase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.3e-49 Score=378.64 Aligned_cols=415 Identities=19% Similarity=0.178 Sum_probs=288.8
Q ss_pred HHHHHHHHhCCCcEEEe---CCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012560 4 DAVSRGITGAGLDVVQY---GLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (461)
Q Consensus 4 ~a~~~gL~s~Gi~V~~~---g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie 80 (461)
+.+++.|+++|++++.. |.+|||++++++++++.. +....+||+||+|||||++-|||...++|+|.++++++.|+
T Consensus 72 ~~~lev~aANgv~~iv~~~~g~~~TPAaSh~I~t~n~k-~k~~~~GIvlT~SHNPP~D~GIKYN~~nGGPA~~~~T~aI~ 150 (524)
T COG0033 72 QSALEVLAANGVEVIVQGQGGFTPTPAASHAILTHNGK-YKALADGIVLTPSHNPPEDGGIKYNPPNGGPAPEKVTDAIE 150 (524)
T ss_pred HHHHHHHHhcCceEEEecCCCccCchHHHHHHHhhccc-ccccCCeEEEcCCCCCcccCCcccCCCCCCCCChHHHHHHH
Confidence 46788999999999876 799999999999976432 22336679999999999999999999999999999888886
Q ss_pred HHHhHHhhhhhccc---ccccccCCCcEEEEcchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhh
Q 012560 81 RAADIYKQFMVEGL---TNLEKQTSTSIKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEP 157 (461)
Q Consensus 81 ~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~ 157 (461)
......-.....++ +....-....+..+|+...|++.|.+.++...| +...+++++|++||++..++.+|+++
T Consensus 151 ~ra~~~~k~~~~~v~r~~~~~~~~~~~v~~~D~v~~Yv~~l~~i~D~daI----r~~~~~l~~D~l~g~t~~Y~~~I~e~ 226 (524)
T COG0033 151 ARANDLYKIGLLDVKRIGLDQAYGSLTVKIIDPVKDYVELLEEIFDFDAI----RKAGLRLGFDPLGGVTGPYWKAIAEK 226 (524)
T ss_pred HHHHHHHHhhhcCccccchhhhcCcceeeeecchHHHHHHHHHhhcHHHH----HHHHhhcccccccCccchhHHHHHHH
Confidence 54221111111111 111112233467789999999999999988775 45677899999999999999999977
Q ss_pred cCCCc-ccceecCCCCCCCCCCCCCCchHHH---HHHHHHHH-hcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHH
Q 012560 158 LGAKT-SGSQFLEPDGMFPNHIPNPEDKTAM---KAIIQAVL-DNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMS 232 (461)
Q Consensus 158 lg~~v-~~~~~~~~d~~f~~~~p~P~~~~~l---~~l~~~v~-~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~ 232 (461)
..... ....|++|-+.|.+++|+|....+- ..+..++. +...|+|.+.|+||||-+++.+...+++|++.+++++
T Consensus 227 ~~~~~t~v~~~~~p~~~F~~l~~D~ni~~~~ss~~~ma~l~~~~d~~d~~aanD~DgDR~~Iv~~~~~~~nPn~~lAv~~ 306 (524)
T COG0033 227 YLLNLTGVNQNVDPTPDFMGLDPDGNIRMDCSSPCAMAGLLRLRDKYDFAAANDGDGDRHGIVTPGAGLMNPNHSLAVAI 306 (524)
T ss_pred hcCCchhhccCcccCccccCCCCCCCEeEecCcHHHHHHhhccccccccccccCCCcccceeecCCCcccCchHHHHHHH
Confidence 54433 2246789999999998888642111 12333333 3789999999999999999998768999999999999
Q ss_pred HHHHHhCCC---C-eEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecCCccC
Q 012560 233 AIVLEEHPG---T-TIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWL 308 (461)
Q Consensus 233 ~~~l~~~~~---~-~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~ 308 (461)
+|+..+.+. . .|-.+.+ |+.++|++++++|.++++|||||||+.+.+.... ..||||||-+ ..|...
T Consensus 307 ~y~~~~~~~~~g~~~v~ktl~-sS~~iDRV~~~lGr~lyEvPvG~K~F~~~l~~g~-----~~~~GEESaG---a~~lRe 377 (524)
T COG0033 307 EYLFLHRPYWGGIVAVGKTLV-SSAAIDRVVAKLGRGLYEVPVGFKWFVDGLDAGS-----FGFGGEESAG---ASFLRE 377 (524)
T ss_pred HHHHhCCCccccceeeeeccc-cHHHHHHHHHHhCCceEEcCCcceeeeccccccc-----eeeccccccc---ccceec
Confidence 998876542 2 3443444 4558899999999999999999999999877644 4699999933 345566
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCCccceeeeeecc-cCCcccCCccchhhHHHHHHHHhhhc--
Q 012560 309 DDGAYLMVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQ-NHSDLKGGSFRDYGEAVLKHLENRVD-- 385 (461)
Q Consensus 309 ~Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~l~~~~~-- 385 (461)
+||.|+.++.+.+|+.....+..+-.+..++..+++-+.|. |..+.. .++- .++++.+|+....
T Consensus 378 k~g~Wa~~~~~~Ilall~aei~a~t~~~~~~~y~~~~r~~~----~~~Yervda~a---------a~~~~a~L~~ls~~~ 444 (524)
T COG0033 378 KGGVWATDKDGNILALLAAEITAVTGKIPQEHYAELGRNFG----RPDYERVDAEA---------ANAQKARLRKLSPEM 444 (524)
T ss_pred CCCceeeechhHHHHHHhhhchhhhccCHHHHHHHHHHHhC----cccHHHhcCch---------hHHHHHHHHhhCccc
Confidence 77777665544444433211111001235666666555432 111111 0221 2334444433221
Q ss_pred ----CCCC---------CCCCCcccCceEEEecCeEEEEEecCCCceeEEEEee-CCHHHHHHHHHHHHHHhhc
Q 012560 386 ----SDPK---------LQKAPVNYEGVRVSGSGGWFLLRLSLHDPVLPLNIEA-PSREDAVKLGLAVAAATKE 445 (461)
Q Consensus 386 ----~~~~---------~~~~~~~~dGlki~~~~~w~liRpSgTeP~irvy~Ea-~~~~~a~~l~~~~~~~v~~ 445 (461)
+.++ .+.+.+.+.||||.+++||+..||||||..+|||+|+ .+.+..++...+.++.|.+
T Consensus 445 v~~t~l~g~~~~a~~~~~~Gn~s~~~GLkV~~~ng~fa~R~SGT~~t~kiY~Esf~~~~h~~~~q~~~~~iV~~ 518 (524)
T COG0033 445 VSATTLAGDPITAYLTPAPGNGAAIGGLKVTTENGWFAARPSGTEATYKIYAESFEGDEHLKQIQKEAAEIVSE 518 (524)
T ss_pred CCccccCCCcchhcccCCCCchhhcCceEEEeeCcEEEEecCCcchhhhhhhhhhCChHHHHHHHHHHHHHHHH
Confidence 1111 2344566799999999999999999999999999999 4555566666666665554
No 38
>KOG0625 consensus Phosphoglucomutase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.7e-46 Score=355.03 Aligned_cols=428 Identities=21% Similarity=0.252 Sum_probs=321.3
Q ss_pred HHHHHHHHhCCCcEEEe---CCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCC---eeeEEcCCCCCCCHHHHH
Q 012560 4 DAVSRGITGAGLDVVQY---GLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRN---GLKFFTNAGGLGKPDIKD 77 (461)
Q Consensus 4 ~a~~~gL~s~Gi~V~~~---g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~n---GiK~~~~~G~~~~~~~~~ 77 (461)
+-+++.-+++|+.-+.+ |..+||+++..+++. .++.|||+.||||||.... ||||.-++|+|.++.+++
T Consensus 72 ~~I~~iaAaNGv~rlivGqnGiLSTPAvS~iIRk~-----~ka~GGiILTASHnPGGP~~DfGIKfN~~NGgPAPesvTd 146 (558)
T KOG0625|consen 72 QIIAKIAAANGVGRLIVGQNGILSTPAVSCIIRKY-----IKAGGGIILTASHNPGGPEGDFGIKFNLENGGPAPESVTD 146 (558)
T ss_pred HHHHHHHhhcCcceEEeccCCcccchHHHHHHHhh-----cccCceEEEEeccCCCCCCCccceEEecCCCCCChHHHHH
Confidence 45677788999998876 799999999998753 2678999999999998775 999999999999988776
Q ss_pred HHHHHHhHHhhh-----hhcccccccc---cCCCcEEEEcchHHHHHHHHHHHHhhcCCCCCC-CCCcEEEEeCCCCCch
Q 012560 78 ILERAADIYKQF-----MVEGLTNLEK---QTSTSIKRVDYMSVYTSDLVKAVRRAAGDIEKP-LEGFHIVVDAGNGAGG 148 (461)
Q Consensus 78 ~ie~~~~~~~~~-----~~~~~~~~~~---~~~~~i~~~~~~~~Y~~~l~~~i~~~~~~~~~~-~~~lkVvvd~~~G~~~ 148 (461)
.|=.+.+...++ ++-++....+ ..+-.+..+|..+.|++.+.+.++.+.++.... .+++++.+|+|||+.+
T Consensus 147 kIy~itk~i~eyki~~~~~iDls~vG~~~~~gpf~VeviDpv~~Yv~lmk~IFDF~~ik~lls~~~~~k~~~DamhGvtG 226 (558)
T KOG0625|consen 147 KIYEITKTISEYKIAKDPKIDLSTVGKTSFDGPFTVEVIDPVKDYVNLMKEIFDFDLIKSLLSGPKKLKFRFDAMHGVTG 226 (558)
T ss_pred HHHHhhhhhhhceeecCcccchhhhccccccCCeeEEEeccHHHHHHHHHHHhCHHHHHHHhcCCCCceEEEeecccccc
Confidence 664333322221 1222211111 122245667999999999999988777644332 2789999999999999
Q ss_pred HHHHHHH-hhcCCCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhH
Q 012560 149 FFAAKVL-EPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRL 227 (461)
Q Consensus 149 ~~~~~ll-~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~ 227 (461)
.+...|| ++||+.....+||.|-|+|++.+|+|.-..+ ..|.+.|...+.|||.|+||||||-.++-.+|.+++|...
T Consensus 227 pY~~~IfvdelGa~~~~~~n~~Pl~DFGG~HPDPNLTYA-k~LV~rv~~~~~~fGAA~DGDGDRNMIlG~~~fFVtPsDS 305 (558)
T KOG0625|consen 227 PYVKAIFVDELGAPASSLQNCVPLEDFGGGHPDPNLTYA-KDLVDRVDRGEIDFGAAFDGDGDRNMILGKNGFFVTPSDS 305 (558)
T ss_pred hhhhHHHHhhhCCChHHhccCeeccccCCCCCCCchhhH-HHHHHHhccCCCcccccccCCCcceeeeccCceeeccchh
Confidence 9999987 8899987546899999999999999998766 4566778888999999999999999999888999999999
Q ss_pred HHHHHHHHHHhC----CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeec
Q 012560 228 IALMSAIVLEEH----PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALK 303 (461)
Q Consensus 228 ~~L~~~~~l~~~----~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~ 303 (461)
+|++|.++...- .+..-.+..+.++..+|++++++|.++++||||+|++.+.|..... -++|||| .+.-+
T Consensus 306 vAiIA~na~~IPYF~~~Gv~GfARSmPTs~AlDrVak~~gl~~yEvPTGWKfF~nLmDAgkl-----siCGEES-FGTGS 379 (558)
T KOG0625|consen 306 VAIIAANAEAIPYFRKQGVKGFARSMPTSGALDRVAKKLGLPVYEVPTGWKFFGNLMDAGKL-----SICGEES-FGTGS 379 (558)
T ss_pred HHHHHhcchhcchhhhcCcchhhhcCCchhHHHHHHHHcCCceEEcCchHHHHHhhhcccce-----eeccccc-ccCCc
Confidence 999999865321 1222223444444577999999999999999999999999976543 3789999 44456
Q ss_pred CCccCCcHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCCc-cceeeeeecccCCcccCCccchhhHHHHHHHHh
Q 012560 304 ENHWLDDGAYLMVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPGF-AVELRLKIDQNHSDLKGGSFRDYGEAVLKHLEN 382 (461)
Q Consensus 304 ~~~~~~Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~ 382 (461)
++...+||+|+.+.+|.+|+. ++. + .+.+++.+.+..|. ....|++++. |.. +..+++|+.|++
T Consensus 380 dHIREKDGiWAvlaWlsIlA~-~k~-~-----~vedI~~~~W~~YGR~fftRYDYE~-~e~-------e~ank~m~~l~a 444 (558)
T KOG0625|consen 380 DHIREKDGIWAVLAWLSILAH-NKQ-N-----VVEDIVKEHWAKYGRNFFTRYDYEE-VEA-------EGANKMMEDLEA 444 (558)
T ss_pred cccccccchhhHHHHHHHHHh-ccc-c-----cHHHHHHHHHHHhCccceeecchhh-cCh-------HhHHHHHHHHHH
Confidence 788899999999999999987 321 1 29999999887653 3335555553 332 335788888876
Q ss_pred hhc-CC------CC-----------------CCCCCcccCceEEEe-cCeEEEEEecCCC---ceeEEEEeeCCHHHHHH
Q 012560 383 RVD-SD------PK-----------------LQKAPVNYEGVRVSG-SGGWFLLRLSLHD---PVLPLNIEAPSREDAVK 434 (461)
Q Consensus 383 ~~~-~~------~~-----------------~~~~~~~~dGlki~~-~~~w~liRpSgTe---P~irvy~Ea~~~~~a~~ 434 (461)
... +. ++ .+..++...|+|+.| +++++.+|-|||. ..+|+|+|+..++. .+
T Consensus 445 ~~~~~~vg~~~~~~~~~y~V~~ad~F~Y~DPvDGSvs~~QGlri~F~dGsR~VfRLSGTGSsGATiRLYie~ye~d~-s~ 523 (558)
T KOG0625|consen 445 LVSDSFVGKSFSPGDEVYKVAKADDFEYTDPVDGSVSKKQGLRIVFEDGSRIVFRLSGTGSSGATIRLYIESYEKDV-SK 523 (558)
T ss_pred HhccccccccccCCCceEEEEecCCceecCCCCCcccccCceEEEEcCCcEEEEEeccCCCCCceEEEehhhhccch-hh
Confidence 542 11 00 123345568999997 5679999999997 58999999966554 44
Q ss_pred HHHHHHHHhhcC--CCCCchHHHHHHh
Q 012560 435 LGLAVAAATKEF--PALDTSALDKFVQ 459 (461)
Q Consensus 435 l~~~~~~~v~~~--~~~~~~~~~~~~~ 459 (461)
+....+..++.+ ++|++|+|.+|+-
T Consensus 524 ~~~~aq~~LkPli~~alk~~~~~e~tG 550 (558)
T KOG0625|consen 524 IDQDAQVALKPLIDIALKISKLKEFTG 550 (558)
T ss_pred hCcCHHHHHHHHHHHHHHHHhHHHhhC
Confidence 444555666665 4889999999973
No 39
>KOG2537 consensus Phosphoglucomutase/phosphomannomutase [Carbohydrate transport and metabolism]
Probab=99.93 E-value=4e-25 Score=217.32 Aligned_cols=294 Identities=21% Similarity=0.240 Sum_probs=172.4
Q ss_pred hHHHHHHHHHHHHhhcCCC-CCCCCCcEEEEeCCCCCchHHHHHHHhhcC--CCcccceecCCCCCCCCCCCCCCc----
Q 012560 111 MSVYTSDLVKAVRRAAGDI-EKPLEGFHIVVDAGNGAGGFFAAKVLEPLG--AKTSGSQFLEPDGMFPNHIPNPED---- 183 (461)
Q Consensus 111 ~~~Y~~~l~~~i~~~~~~~-~~~~~~lkVvvd~~~G~~~~~~~~ll~~lg--~~v~~~~~~~~d~~f~~~~p~P~~---- 183 (461)
.+.|++.+.+.+....... .......|+.|||.||+|..-+..+..-.. ..+. .+|...||..-|..|.-..
T Consensus 186 ~~~Y~~~ls~af~~l~~~~~~~~~~~~k~~VD~ANGvG~~klk~l~~i~~~~l~vE-ivNd~~dpelLN~~CGADFVkt~ 264 (539)
T KOG2537|consen 186 EEGYYSKLSKAFNELRNITQESGDEVSKLIVDCANGVGAPKLKELLGIDSGLLNVE-VVNDGIDPGLLNNGCGADFVKTK 264 (539)
T ss_pred cccHHHHHHHHHHHhhhhccccCCccceEEEECccccchHHHHHHhccCCCcCceE-EEcCCCChhhhccccccchhhcc
Confidence 4568888877765433211 112245699999999999998887765221 1111 2333333222222111000
Q ss_pred ---hHHHHHHHHHHHhcCC-cEEEeeCCCCceeEEE--cCCC--ccccchhHHHHHHHHHHHhC---C---CCeEEEecc
Q 012560 184 ---KTAMKAIIQAVLDNKA-DLGIIFDTDVDRSAAV--DSTG--HELNRNRLIALMSAIVLEEH---P---GTTIVTDSV 249 (461)
Q Consensus 184 ---~~~l~~l~~~v~~~~a-dlgia~D~DgDR~~~v--d~~G--~~l~~d~~~~L~~~~~l~~~---~---~~~vv~~~~ 249 (461)
|..+.. ..+ -.+..||||+||+.++ ++++ +++++|.+..+++.|+-+.. . ..++|.+..
T Consensus 265 QkpP~~~~~-------~~~~~~caSfDGDADRlvyf~~~~~~~f~llDGDkistlla~~l~~ll~~~~~~l~~GvVqtaY 337 (539)
T KOG2537|consen 265 QKPPKGLSP-------IKANTRCASFDGDADRLVYFYIDDDSEFHLLDGDKIATLIAGYLRELLKQIELSLRLGVVQTAY 337 (539)
T ss_pred ccCCCCCCC-------CCCCCceeeeecccceeEEEEecCCceeEeecchHHHHHHHHHHHHHHHHhhccceeeeEEEEe
Confidence 011110 112 3689999999999886 5555 89999999999999875432 1 235888888
Q ss_pred CChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeeccee--ecCCcc-------CCcHH--HHHHHH
Q 012560 250 TSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGA--LKENHW-------LDDGA--YLMVKL 318 (461)
Q Consensus 250 ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~--~~~~~~-------~~Dgi--~aa~~l 318 (461)
++....+++...+++.++.++||.|++.+++.+.+ ..+.||.+||+. |++... ..+.. ..++.+
T Consensus 338 aNgast~yl~~~l~~~vv~v~tGvKhlh~~A~efD-----iGiyFEaNGHGti~FS~~~~~~i~~~~~~~~~~~~~a~~~ 412 (539)
T KOG2537|consen 338 ANGASTDYLKETLKFPVVCVPTGVKHLHHAAAEFD-----IGIYFEANGHGTILFSEAFLATIKDLAETKEPGESKALKT 412 (539)
T ss_pred ecCccHhhhhhhcCCceEEeccccchHHHHHHhhc-----ceeEEeccCccceeehHHHHHhhhhhhhCCCccchHHHHH
Confidence 88888899988899999999999999999988655 357899999985 433210 11111 122333
Q ss_pred HHHHHHHHHcCCCCCcccHHHHH--------------------hhccCCCccceeeeeecccCCcccCCccchhhHHHHH
Q 012560 319 LNKLASARAAGRGGGSKVLTDLV--------------------DGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLK 378 (461)
Q Consensus 319 l~~l~~~~~~~~~~~~~~Ls~ll--------------------~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 378 (461)
|..++.- ..+... ..+++++ .++|.+ .+++.+. + .+++.
T Consensus 413 L~~~~~L-inq~vG--DAisd~llv~~il~~~~~s~~~w~e~y~dlPnr----q~Kv~v~----D----------r~i~~ 471 (539)
T KOG2537|consen 413 LKLLSDL-INQTVG--DAISDMLAVEAILAHKGWSVQDWDELYRDLPNR----QLKVKVP----D----------RSIIK 471 (539)
T ss_pred HHHHHhh-hcccch--hhhcchHHHHHHHHhcCCCHHHHHHHhcCCccc----eEEEEec----c----------ceeee
Confidence 3322221 100000 2233332 222221 1122111 0 00000
Q ss_pred HHHhhhcCCCCCCCCCcccCceEE-------EecCeEEEEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcC
Q 012560 379 HLENRVDSDPKLQKAPVNYEGVRV-------SGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEF 446 (461)
Q Consensus 379 ~l~~~~~~~~~~~~~~~~~dGlki-------~~~~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v~~~ 446 (461)
.-.. + ....+=+|++. .+..|+.++||||||.++|||+|+.+++.+++|+.+..+.|..+
T Consensus 472 ttda--e------r~~v~P~glQ~~Ida~vaky~~gRaFvR~SGTEdvVRVYAEa~t~~~~d~l~~~v~~~v~~~ 538 (539)
T KOG2537|consen 472 TTDA--E------RQLVKPVGLQDKIDALVAKYKRGRSFVRPSGTEDVVRVYAEASTKEDADQLALEVAQLVLKL 538 (539)
T ss_pred chhh--h------hhcCCcHHHHHHHHHHHhhccCCceEEeccCccceEEEEEecCchhhHHHHHHHHHHHHHhh
Confidence 0000 0 00011123321 24579999999999999999999999999999999999988754
No 40
>PF02879 PGM_PMM_II: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; InterPro: IPR005845 The alpha-D-phosphohexomutase superfamily is composed of four related enzymes, each of which catalyses a phosphoryl transfer on their sugar substrates: phosphoglucomutase (PGM), phosphoglucomutase/phosphomannomutase (PGM/PMM), phosphoglucosamine mutase (PNGM), and phosphoacetylglucosamine mutase (PAGM) []. PGM (5.4.2.2 from EC) converts D-glucose 1-phosphate into D-glucose 6-phosphate, and participates in both the breakdown and synthesis of glucose []. PGM/PMM (5.4.2.2 from EC; 5.4.2.8 from EC) are primarily bacterial enzymes that use either glucose or mannose as substrate, participating in the biosynthesis of a variety of carbohydrates such as lipopolysaccharides and alginate [, ]. Both PNGM (5.4.2.3 from EC) and PAGM (5.4.2.10 from EC) are involved in the biosynthesis of UDP-N-acetylglucosamine [, ]. Despite differences in substrate specificity, these enzymes share a similar catalytic mechanism, converting 1-phospho-sugars to 6-phospho-sugars via a biphosphorylated 1,6-phospho-sugar. The active enzyme is phosphorylated at a conserved serine residue and binds one magnesium ion; residues around the active site serine are well conserved among family members. The reaction mechanism involves phosphoryl transfer from the phosphoserine to the substrate to create a biophosphorylated sugar, followed by a phosphoryl transfer from the substrate back to the enzyme []. The structures of PGM and PGM/PMM have been determined, and were found to be very similar in topology. These enzymes are both composed of four domains and a large central active site cleft, where each domain contains residues essential for catalysis and/or substrate recognition. Domain I contains the catalytic phosphoserine, domain II contains a metal-binding loop to coordinate the magnesium ion, domain III contains the sugar-binding loop that recognises the two different binding orientations of the 1- and 6-phospho-sugars, and domain IV contains a phosphate-binding site required for orienting the incoming phospho-sugar substrate. This entry represents domain II found in alpha-D-phosphohexomutase enzymes. This domain has a 3-layer alpha/beta/alpha topology.; GO: 0016868 intramolecular transferase activity, phosphotransferases, 0005975 carbohydrate metabolic process; PDB: 2F7L_A 3PDK_B 1KFQ_B 1KFI_A 1C47_A 1VKL_B 1LXT_A 1JDY_B 3PMG_A 1C4G_B ....
Probab=99.87 E-value=3.2e-22 Score=164.97 Aligned_cols=102 Identities=40% Similarity=0.637 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHH-hhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcCCCcccceecCCCCCCCC-CCCCCCchHHHHH
Q 012560 112 SVYTSDLVKAVR-RAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLGAKTSGSQFLEPDGMFPN-HIPNPEDKTAMKA 189 (461)
Q Consensus 112 ~~Y~~~l~~~i~-~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~-~~p~P~~~~~l~~ 189 (461)
+.|++.+.+.++ .+.+ +.+++||+|||+||+++.+++.+|++|||+++ .+|+.+|+.|++ +.|+|+. +++..
T Consensus 1 e~Y~~~l~~~~~~~~~~----~~~~~kivvD~~~G~~~~~~~~ll~~lg~~~~-~~n~~~d~~f~~~~~p~p~~-~~l~~ 74 (104)
T PF02879_consen 1 EAYIESLLSFIDILEAI----KKSGLKIVVDCMNGAGSDILPRLLERLGCDVI-ELNCDPDPDFPNQHAPNPEE-ESLQR 74 (104)
T ss_dssp HHHHHHHHHTSCHHHHH----HHTTCEEEEE-TTSTTHHHHHHHHHHTTCEEE-EESSS-STTGTTTSTSSTST-TTTHH
T ss_pred ChHHHHHhhhccchhhc----ccCCCEEEEECCCCHHHHHHHHHHHHcCCcEE-EEeccccccccccccccccc-chhHH
Confidence 579999998887 3332 34689999999999999999999999999998 589999999999 8999997 88999
Q ss_pred HHHHHHhcCCcEEEeeCCCCceeEEEcCCC
Q 012560 190 IIQAVLDNKADLGIIFDTDVDRSAAVDSTG 219 (461)
Q Consensus 190 l~~~v~~~~adlgia~D~DgDR~~~vd~~G 219 (461)
+.+.+++.++|+|+++||||||++++|++|
T Consensus 75 ~~~~v~~~~ad~g~~~DgDaDRl~~vd~~G 104 (104)
T PF02879_consen 75 LIKIVRESGADLGIAFDGDADRLGVVDENG 104 (104)
T ss_dssp HHHHHHHSTTSEEEEE-TTSSBEEEEETTS
T ss_pred HHHHhhccCceEEEEECCcCceeEEECCCC
Confidence 999999999999999999999999999987
No 41
>PF02880 PGM_PMM_III: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; InterPro: IPR005846 The alpha-D-phosphohexomutase superfamily is composed of four related enzymes, each of which catalyses a phosphoryl transfer on their sugar substrates: phosphoglucomutase (PGM), phosphoglucomutase/phosphomannomutase (PGM/PMM), phosphoglucosamine mutase (PNGM), and phosphoacetylglucosamine mutase (PAGM) []. PGM (5.4.2.2 from EC) converts D-glucose 1-phosphate into D-glucose 6-phosphate, and participates in both the breakdown and synthesis of glucose []. PGM/PMM (5.4.2.2 from EC; 5.4.2.8 from EC) are primarily bacterial enzymes that use either glucose or mannose as substrate, participating in the biosynthesis of a variety of carbohydrates such as lipopolysaccharides and alginate [, ]. Both PNGM (5.4.2.3 from EC) and PAGM (5.4.2.10 from EC) are involved in the biosynthesis of UDP-N-acetylglucosamine [, ]. Despite differences in substrate specificity, these enzymes share a similar catalytic mechanism, converting 1-phospho-sugars to 6-phospho-sugars via a biphosphorylated 1,6-phospho-sugar. The active enzyme is phosphorylated at a conserved serine residue and binds one magnesium ion; residues around the active site serine are well conserved among family members. The reaction mechanism involves phosphoryl transfer from the phosphoserine to the substrate to create a biophosphorylated sugar, followed by a phosphoryl transfer from the substrate back to the enzyme []. The structures of PGM and PGM/PMM have been determined, and were found to be very similar in topology. These enzymes are both composed of four domains and a large central active site cleft, where each domain contains residues essential for catalysis and/or substrate recognition. Domain I contains the catalytic phosphoserine, domain II contains a metal-binding loop to coordinate the magnesium ion, domain III contains the sugar-binding loop that recognises the two different binding orientations of the 1- and 6-phospho-sugars, and domain IV contains a phosphate-binding site required for orienting the incoming phospho-sugar substrate. This entry represents domain III found in alpha-D-phosphohexomutase enzymes. This domain has a 3-layer alpha/beta/alpha topology.; GO: 0016868 intramolecular transferase activity, phosphotransferases, 0005975 carbohydrate metabolic process; PDB: 1C47_A 1VKL_B 1LXT_A 1JDY_B 3PMG_A 1C4G_B 3UW2_A 2F7L_B 3I3W_B 2Z0F_A ....
Probab=99.86 E-value=1.7e-21 Score=162.94 Aligned_cols=111 Identities=35% Similarity=0.473 Sum_probs=93.8
Q ss_pred cchhHHHHHHHHHHHhCC-CCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeeccee
Q 012560 223 NRNRLIALMSAIVLEEHP-GTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGA 301 (461)
Q Consensus 223 ~~d~~~~L~~~~~l~~~~-~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~ 301 (461)
+||++++|+++++++.++ +..||.+.+||. +++.+++++|+++++|||||+||.+.|.+.++ +||||+|||++
T Consensus 1 ~gd~~~al~a~~~l~~~~~~~~vv~~v~sS~-~~~~~~~~~g~~~~~t~vG~~~i~~~~~~~~~-----~~ggE~sgg~~ 74 (113)
T PF02880_consen 1 NGDELLALLADYLLEEHKPGGTVVVTVVSSR-ALDKIAEKHGGKVIRTKVGFKNIAEKMREENA-----VFGGEESGGFI 74 (113)
T ss_dssp HHHHHHHHHHHHHHHCHTTTEEEEEETTS-T-HHHHHHHHTTSEEEEESSSHHHHHHHHHHTTE-----SEEEETTSEEE
T ss_pred CcHHHHHHHHHHHHHhCCCCCEEEEeCHHHH-HHHHHHHHCCCEEEEecCCcHHHHHHHhhhce-----eEEecccCeEE
Confidence 489999999999988543 335887777666 66778899999999999999999999999764 69999999999
Q ss_pred ecCCccCCcHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhhccCC
Q 012560 302 LKENHWLDDGAYLMVKLLNKLASARAAGRGGGSKVLTDLVDGLEEP 347 (461)
Q Consensus 302 ~~~~~~~~Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~ 347 (461)
|+++++.+||++++++++++|+..+ ++|+++++++|++
T Consensus 75 ~~~~~~~~Dgi~a~~~~l~~l~~~~--------~~ls~ll~~l~~~ 112 (113)
T PF02880_consen 75 FPDFSYDKDGIYAALLLLELLAEEG--------KTLSELLDELPKK 112 (113)
T ss_dssp ETTTESSE-HHHHHHHHHHHHHHHT--------S-HHHHHHHHHHH
T ss_pred ecCCCCCCcHHHHHHHHHHHHHHhC--------CCHHHHHHHHhcc
Confidence 9999999999999999999888653 4599999999975
No 42
>PF02878 PGM_PMM_I: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; InterPro: IPR005844 The alpha-D-phosphohexomutase superfamily is composed of four related enzymes, each of which catalyses a phosphoryl transfer on their sugar substrates: phosphoglucomutase (PGM), phosphoglucomutase/phosphomannomutase (PGM/PMM), phosphoglucosamine mutase (PNGM), and phosphoacetylglucosamine mutase (PAGM) []. PGM (5.4.2.2 from EC) converts D-glucose 1-phosphate into D-glucose 6-phosphate, and participates in both the breakdown and synthesis of glucose []. PGM/PMM (5.4.2.2 from EC; 5.4.2.8 from EC) are primarily bacterial enzymes that use either glucose or mannose as substrate, participating in the biosynthesis of a variety of carbohydrates such as lipopolysaccharides and alginate [, ]. Both PNGM (5.4.2.3 from EC) and PAGM (5.4.2.10 from EC) are involved in the biosynthesis of UDP-N-acetylglucosamine [, ]. Despite differences in substrate specificity, these enzymes share a similar catalytic mechanism, converting 1-phospho-sugars to 6-phospho-sugars via a biphosphorylated 1,6-phospho-sugar. The active enzyme is phosphorylated at a conserved serine residue and binds one magnesium ion; residues around the active site serine are well conserved among family members. The reaction mechanism involves phosphoryl transfer from the phosphoserine to the substrate to create a biophosphorylated sugar, followed by a phosphoryl transfer from the substrate back to the enzyme []. The structures of PGM and PGM/PMM have been determined, and were found to be very similar in topology. These enzymes are both composed of four domains and a large central active site cleft, where each domain contains residues essential for catalysis and/or substrate recognition. Domain I contains the catalytic phosphoserine, domain II contains a metal-binding loop to coordinate the magnesium ion, domain III contains the sugar-binding loop that recognises the two different binding orientations of the 1- and 6-phospho-sugars, and domain IV contains a phosphate-binding site required for orienting the incoming phospho-sugar substrate. This entry represents domain I found in alpha-D-phosphohexomutase enzymes. This domain has a 3-layer alpha/beta/alpha topology.; GO: 0016868 intramolecular transferase activity, phosphotransferases, 0005975 carbohydrate metabolic process; PDB: 3I3W_B 1WQA_C 1KFQ_B 1KFI_A 2Z0F_A 2FKM_X 3C04_A 1K2Y_X 1P5G_X 2H4L_X ....
Probab=99.77 E-value=2e-19 Score=155.75 Aligned_cols=77 Identities=40% Similarity=0.618 Sum_probs=64.4
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie 80 (461)
+|+++++++|+++|++|+++|.+|||+++|++. +++++|||||||||||++||||||++++|.++.++.++.|+
T Consensus 55 ~~~~~~~~~l~~~G~~V~~~g~~~tP~~~~~~~------~~~~~ggi~iTaShnp~~~ngik~~~~~G~~~~~~~~~~I~ 128 (137)
T PF02878_consen 55 MLAKALAAGLRANGVDVIDIGLVPTPALSFAIR------QLNADGGIMITASHNPPGYNGIKFFDANGGPISPEEERKIE 128 (137)
T ss_dssp HHHHHHHHHHHHTTEEEEEEEEB-HHHHHHHHH------HHTESEEEEE--TTS-TTEEEEEEEETTSSB--HHHHHHHH
T ss_pred HHHHHHHHHHhhcccccccccccCcHHhhhhcc------ccccceeeEEEecCCCCCcceEEEEeCCCCcCCHHHHHHHH
Confidence 489999999999999999999999999999997 56789999999999999999999999999998887777666
Q ss_pred HHH
Q 012560 81 RAA 83 (461)
Q Consensus 81 ~~~ 83 (461)
+..
T Consensus 129 ~~~ 131 (137)
T PF02878_consen 129 QII 131 (137)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 43
>PF00408 PGM_PMM_IV: Phosphoglucomutase/phosphomannomutase, C-terminal domain; InterPro: IPR005843 The alpha-D-phosphohexomutase superfamily is composed of four related enzymes, each of which catalyses a phosphoryl transfer on their sugar substrates: phosphoglucomutase (PGM), phosphoglucomutase/phosphomannomutase (PGM/PMM), phosphoglucosamine mutase (PNGM), and phosphoacetylglucosamine mutase (PAGM) []. PGM (5.4.2.2 from EC) converts D-glucose 1-phosphate into D-glucose 6-phosphate, and participates in both the breakdown and synthesis of glucose []. PGM/PMM (5.4.2.2 from EC; 5.4.2.8 from EC) are primarily bacterial enzymes that use either glucose or mannose as substrate, participating in the biosynthesis of a variety of carbohydrates such as lipopolysaccharides and alginate [, ]. Both PNGM (5.4.2.3 from EC) and PAGM (5.4.2.10 from EC) are involved in the biosynthesis of UDP-N-acetylglucosamine [, ]. Despite differences in substrate specificity, these enzymes share a similar catalytic mechanism, converting 1-phospho-sugars to 6-phospho-sugars via a biphosphorylated 1,6-phospho-sugar. The active enzyme is phosphorylated at a conserved serine residue and binds one magnesium ion; residues around the active site serine are well conserved among family members. The reaction mechanism involves phosphoryl transfer from the phosphoserine to the substrate to create a biophosphorylated sugar, followed by a phosphoryl transfer from the substrate back to the enzyme []. The structures of PGM and PGM/PMM have been determined, and were found to be very similar in topology. These enzymes are both composed of four domains and a large central active site cleft, where each domain contains residues essential for catalysis and/or substrate recognition. Domain I contains the catalytic phosphoserine, domain II contains a metal-binding loop to coordinate the magnesium ion, domain III contains the sugar-binding loop that recognises the two different binding orientations of the 1- and 6-phospho-sugars, and domain IV contains a phosphate-binding site required for orienting the incoming phospho-sugar substrate. This entry represents the C-terminal domain alpha-D-phosphohexomutase enzymes.; GO: 0016868 intramolecular transferase activity, phosphotransferases, 0005975 carbohydrate metabolic process; PDB: 1KFQ_B 1KFI_A 3PDK_B 2F7L_A 1TUO_A 2FKM_X 3C04_A 1K2Y_X 1P5G_X 2H4L_X ....
Probab=99.43 E-value=3.2e-13 Score=103.45 Aligned_cols=49 Identities=29% Similarity=0.533 Sum_probs=44.9
Q ss_pred ccCceEEEecCeEEE-EEecCCCceeEEEEeeCCHHHHHHHHHHHHHHhh
Q 012560 396 NYEGVRVSGSGGWFL-LRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATK 444 (461)
Q Consensus 396 ~~dGlki~~~~~w~l-iRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v~ 444 (461)
..||+++.++|||++ ||||||||++|||+||.|++.++++++.+.+.|+
T Consensus 24 ~~~~~~~~~~dG~~l~vR~SgTEP~iRv~~Ea~~~~~~~~~~~~i~~~ik 73 (73)
T PF00408_consen 24 TIDGIKILFEDGWRLLVRPSGTEPKIRVYVEAPDEEELEEIAEEIAEAIK 73 (73)
T ss_dssp HHHCEEEEETTEEEEEEEEESSSSEEEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred ccceEEEECCCceEEEEECCCCCceEEEEEEeCCHHHHHHHHHHHHHhhC
Confidence 468999999888777 9999999999999999999999999999988874
No 44
>cd03086 PGM3 PGM3 (phosphoglucomutase 3), also known as PAGM (phosphoacetylglucosamine mutase) and AGM1 (N-acetylglucosamine-phosphate mutase), is an essential enzyme found in eukaryotes that reversibly catalyzes the conversion of GlcNAc-6-phosphate into GlcNAc-1-phosphate as part of the UDP-N-acetylglucosamine (UDP-GlcNAc) biosynthetic pathway. UDP-GlcNAc is an essential metabolite that serves as the biosynthetic precursor of many glycoproteins and mucopolysaccharides. AGM1 is a member of the alpha-D-phosphohexomutase superfamily, which catalyzes the intramolecular phosphoryl transfer of sugar substrates. The alpha-D-phosphohexomutases have four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=96.67 E-value=0.0013 Score=69.20 Aligned_cols=34 Identities=29% Similarity=0.515 Sum_probs=32.3
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCCchhhhhhhcc
Q 012560 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLT 34 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~g~~~tP~~~~a~~~ 34 (461)
||++++++||.++|++|+++|.+|||+++|++..
T Consensus 117 ~l~~a~~~gl~~~G~~V~d~g~~~TP~~~~~v~~ 150 (513)
T cd03086 117 ALLQALLDGLKALGGNVIDYGLVTTPQLHYLVRA 150 (513)
T ss_pred HHHHHHHHHHHHCCCeEEEccCcCcHHHHHHHHh
Confidence 6899999999999999999999999999999973
No 45
>PLN02895 phosphoacetylglucosamine mutase
Probab=94.94 E-value=0.023 Score=60.12 Aligned_cols=34 Identities=24% Similarity=0.388 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhCCCcEEEeCCCCchhhhhhhccc
Q 012560 2 LQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTE 35 (461)
Q Consensus 2 l~~a~~~gL~s~Gi~V~~~g~~~tP~~~~a~~~~ 35 (461)
|++++++||.+.|++|+++|.+|||+++|++...
T Consensus 143 l~~a~~~gl~~~G~~v~d~G~~tTP~l~~~v~~~ 176 (562)
T PLN02895 143 LLAAALKGVRAIGARAVDMGILTTPQLHWMVRAA 176 (562)
T ss_pred HHHHHHHHHHHCCCCEEEeCcCCcHHHHHHHHhc
Confidence 7899999999999999999999999999998744
No 46
>PTZ00302 N-acetylglucosamine-phosphate mutase; Provisional
Probab=94.70 E-value=0.025 Score=60.30 Aligned_cols=34 Identities=26% Similarity=0.403 Sum_probs=31.8
Q ss_pred CHHHHHHHHHH-hCCCcEEEeCCCCchhhhhhhcc
Q 012560 1 MLQDAVSRGIT-GAGLDVVQYGLASTPAMFNSTLT 34 (461)
Q Consensus 1 ~l~~a~~~gL~-s~Gi~V~~~g~~~tP~~~~a~~~ 34 (461)
+|++|+++||+ +.|++|+++|.+|||+++|++..
T Consensus 167 ~L~~al~~gl~~~~G~~v~d~G~~tTP~l~y~v~~ 201 (585)
T PTZ00302 167 ELVSALLRGLKLLIGSNVRNFGIVTTPQLHFLVAF 201 (585)
T ss_pred HHHHHHHHHHHHhcCCcEEEeCCCCcHHHHHHHHH
Confidence 47899999999 99999999999999999999874
No 47
>PF11576 DUF3236: Protein of unknown function (DUF3236); InterPro: IPR012019 This family of proteins with unknown function appears to be restricted to Methanobacteria. ; PDB: 3BRC_B.
Probab=64.24 E-value=12 Score=31.97 Aligned_cols=82 Identities=22% Similarity=0.188 Sum_probs=45.2
Q ss_pred EEEEeCCCCCchHHHHHHHhhcCCCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEe-----eCCCCce
Q 012560 137 HIVVDAGNGAGGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGII-----FDTDVDR 211 (461)
Q Consensus 137 kVvvd~~~G~~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia-----~D~DgDR 211 (461)
+|||-..|+-=-.++..++.+++..-.. +.+- |+..++-+..-++....-.+...+||+.++ .=|.|.=
T Consensus 37 kIvV~t~N~kKf~vi~~il~~~~~~~i~--~l~i----~Tn~aDlTrmPA~~K~LmavD~~dADlvIARGRLGvPGSGSm 110 (154)
T PF11576_consen 37 KIVVATNNEKKFKVINDILSKFNLPEIE--MLDI----PTNSADLTRMPALSKALMAVDISDADLVIARGRLGVPGSGSM 110 (154)
T ss_dssp -EEE----HHHHHHHHHHHHHTT----E--E--S------GGGGGSSSHHHHHHHHHHHHH--SEEEEEEE-SSTTS-EE
T ss_pred eEEEecCCchHhHHHHHHHHHhcCCccc--eeec----cCcchhcccCcHHHhHHHheeccCCcEEEEcccccCCCCccE
Confidence 7899888888888999999999865431 1222 222222222334555555677889999987 4577777
Q ss_pred eEEEcCCCccccc
Q 012560 212 SAAVDSTGHELNR 224 (461)
Q Consensus 212 ~~~vd~~G~~l~~ 224 (461)
+.+.|.+|+++++
T Consensus 111 lvimD~kGRiLta 123 (154)
T PF11576_consen 111 LVIMDSKGRILTA 123 (154)
T ss_dssp EEEEETTS-EEEE
T ss_pred EEEEcCCCcEEee
Confidence 7888999998865
No 48
>TIGR02133 RPI_actino ribose 5-phosphate isomerase. This family is a member of the RpiB/LacA/LacB subfamily (TIGR00689) but lies outside the RpiB equivalog (TIGR01120) which is also a member of that subfamily. Ribose 5-phosphate isomerase is an essential enzyme of the pentose phosphate pathway; a pathway that appears to be present in the actinobacteria. The only candidates for ribose 5-phosphate isomerase in the Actinobacteria are members of this family.
Probab=62.57 E-value=99 Score=26.90 Aligned_cols=67 Identities=18% Similarity=0.095 Sum_probs=40.3
Q ss_pred EEEEeCCCCC--chHHHHHHHhhcCCCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCc
Q 012560 137 HIVVDAGNGA--GGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVD 210 (461)
Q Consensus 137 kVvvd~~~G~--~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgD 210 (461)
||++.+-|.. -...+...|++.|++|.. +... +.. .....| ..-..+.+.|.+..+|+||.+.|.|=
T Consensus 2 kI~igsDhaG~~lK~~l~~~L~~~g~eV~D-~G~~-~~~--~~~dYp---d~a~~va~~V~~~~~~~GIliCGtGi 70 (148)
T TIGR02133 2 RVVLGHDHAGFEYKEALWLDLAAHEPEVCD-VGVY-DAD--DDDDYP---CFCIAAAEAVARDAADLGIVIGGSGN 70 (148)
T ss_pred EEEEEeCchhHHHHHHHHHHHHHCCCEEEE-CCCC-CCC--CCCCch---HHHHHHHHHHhcCCCceEEEEcCCCh
Confidence 6777777763 344667778889998752 2110 000 001112 22346777888888888888887773
No 49
>PRK08621 galactose-6-phosphate isomerase subunit LacA; Reviewed
Probab=61.51 E-value=27 Score=30.12 Aligned_cols=63 Identities=17% Similarity=0.153 Sum_probs=38.2
Q ss_pred EEEEeCCCC--CchHHHHHHHhhcCCCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCC
Q 012560 137 HIVVDAGNG--AGGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDV 209 (461)
Q Consensus 137 kVvvd~~~G--~~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~Dg 209 (461)
||++-+-|+ .-...+.+.|++.|++|+. +. ++. + ... |..-..+.+.|.+..+|.||.+.|.|
T Consensus 2 kI~igsDhaG~~lK~~l~~~L~~~G~eV~D-~G--~~~--~--~dY---pd~a~~va~~V~~~~~~~GIliCGTG 66 (142)
T PRK08621 2 AIIIGADKAGFELKEVVKDYLEDNKYEVVD-VT--EEG--A--EDF---VDSTLAVAKEVNKSEDNLGIVIDAYG 66 (142)
T ss_pred EEEEEeCcchHHHHHHHHHHHHHCCCEEEE-CC--CCC--C--CCc---HHHHHHHHHHHHcCCCceEEEEcCCC
Confidence 677777775 2455677788999998862 22 211 1 112 22234677777777777777776655
No 50
>TIGR01118 lacA galactose-6-phosphate isomerase, LacA subunit. This family contains members from low GC gram-positive bacteria. Galactose-6-phosphate isomerase is involved in lactose catabolism by the tagatose-6-phosphate pathway.
Probab=59.85 E-value=34 Score=29.52 Aligned_cols=63 Identities=16% Similarity=0.129 Sum_probs=38.7
Q ss_pred EEEEeCCCCC--chHHHHHHHhhcCCCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCC
Q 012560 137 HIVVDAGNGA--GGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDV 209 (461)
Q Consensus 137 kVvvd~~~G~--~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~Dg 209 (461)
||++-+-|+. -...+...|++.|++|+. +.. .+ +... +..-..+.+.|.+..+|.||.++|-|
T Consensus 2 kI~IgsDh~G~~lK~~i~~~L~~~G~eV~D-~G~-~~---~~dY-----pd~a~~va~~V~~~e~~~GIliCGtG 66 (141)
T TIGR01118 2 AIIIGSDLAGKRLKDVIKNFLVDNGFEVID-VTE-GD---GQDF-----VDVTLAVASEVQKDEQNLGIVIDAYG 66 (141)
T ss_pred EEEEEeCcchHHHHHHHHHHHHHCCCEEEE-cCC-CC---CCCc-----HHHHHHHHHHHHcCCCceEEEEcCCC
Confidence 6777777763 344667788889998863 221 11 1111 22234677778777888888877655
No 51
>PRK05571 ribose-5-phosphate isomerase B; Provisional
Probab=54.77 E-value=49 Score=28.80 Aligned_cols=66 Identities=21% Similarity=0.196 Sum_probs=36.1
Q ss_pred EEEEeCCCCC--chHHHHHHHhhcCCCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCC
Q 012560 137 HIVVDAGNGA--GGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDV 209 (461)
Q Consensus 137 kVvvd~~~G~--~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~Dg 209 (461)
||++-+-|.- -...+...|++.|++|+. +. ++. ...| ..-+..-..+.+.|.+..+|+||.+.|-|
T Consensus 2 kI~igsDhaG~~lK~~l~~~L~~~g~eV~D-~G--~~~---~~~~-~dYpd~a~~va~~V~~g~~~~GIliCGtG 69 (148)
T PRK05571 2 KIAIGSDHAGFELKEEIIEHLEELGHEVID-LG--PDS---YDAS-VDYPDYAKKVAEAVVAGEADRGILICGTG 69 (148)
T ss_pred EEEEEeCCchHHHHHHHHHHHHHCCCEEEE-cC--CCC---CCCC-CCHHHHHHHHHHHHHcCCCCEEEEEcCCc
Confidence 6777777652 344667788889998862 21 110 0000 01123334566777766666666665544
No 52
>PRK08622 galactose-6-phosphate isomerase subunit LacB; Reviewed
Probab=54.42 E-value=54 Score=29.21 Aligned_cols=102 Identities=14% Similarity=0.066 Sum_probs=53.4
Q ss_pred EEEEeCCCCC--chHHHHHHHhhcCCCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEE
Q 012560 137 HIVVDAGNGA--GGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAA 214 (461)
Q Consensus 137 kVvvd~~~G~--~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~ 214 (461)
||++-+-|.. -...+.+.|++.|.+|+. +. ++..=+ ... |..-..+.+.|.+..+|+||.+.|-|
T Consensus 2 kI~IgsDhaG~~lK~~l~~~L~~~G~eV~D-~G--~~~~e~--~dY---pd~a~~va~~V~~g~~d~GIliCGTG----- 68 (171)
T PRK08622 2 KIAIGCDHIVTDEKMAVSDYLKSKGHEVID-VG--TYDFTR--THY---PIFGKKVGEAVASGEADLGVCICGTG----- 68 (171)
T ss_pred EEEEEeCcchHHHHHHHHHHHHHCCCEEEE-cC--CCCCCC--CCh---HHHHHHHHHHHHcCCCcEEEEEcCCc-----
Confidence 6777777753 445677778888998862 22 111000 111 23234566677666666666665443
Q ss_pred EcCCCccccchhHHHHHHHHHHHhCCCCeEEEeccCChhHHHHHHHHcCCeEEE
Q 012560 215 VDSTGHELNRNRLIALMSAIVLEEHPGTTIVTDSVTSDGLTTFIEKKLGGKHHR 268 (461)
Q Consensus 215 vd~~G~~l~~d~~~~L~~~~~l~~~~~~~vv~~~~ss~~~~~~ia~~~g~~v~~ 268 (461)
-| .-++. .+-++|.+..+++........+.+++.+..
T Consensus 69 ---iG---------~siaA-----NKv~GIRAA~~~d~~sA~~aR~hNnaNVL~ 105 (171)
T PRK08622 69 ---VG---------ISNAV-----NKVPGIRSALVRDMTSALYAKEELNANVIG 105 (171)
T ss_pred ---HH---------HHHHH-----hcCCCeEEEEeCCHHHHHHHHHhcCCcEEE
Confidence 12 11111 133457776666665555444444555553
No 53
>PRK12615 galactose-6-phosphate isomerase subunit LacB; Reviewed
Probab=53.77 E-value=56 Score=29.15 Aligned_cols=65 Identities=17% Similarity=0.141 Sum_probs=36.4
Q ss_pred EEEEeCCCCC--chHHHHHHHhhcCCCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCC
Q 012560 137 HIVVDAGNGA--GGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDV 209 (461)
Q Consensus 137 kVvvd~~~G~--~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~Dg 209 (461)
||++-+-|+. -...+...|++.|++|+. + .++..=+.. . +..-..+.+.|.+..+|+||.+.|-|
T Consensus 2 kI~igsDhaG~~lK~~l~~~L~~~G~eV~D-~--G~~~~~~~d--Y---pd~a~~va~~V~~g~~d~GIliCGTG 68 (171)
T PRK12615 2 KIAIGCDHIVTNEKMAVSDFLKSKGYDVID-C--GTYDHTRTH--Y---PIFGKKVGEAVVNGQADLGVCICGTG 68 (171)
T ss_pred EEEEEeCchhHHHHHHHHHHHHHCCCEEEE-c--CCCCCCCCC--h---HHHHHHHHHHHHcCCCCEEEEEcCCc
Confidence 6777777753 344667778889998862 2 111100001 1 22234566777776677777665544
No 54
>PRK12613 galactose-6-phosphate isomerase subunit LacA; Provisional
Probab=50.46 E-value=55 Score=28.21 Aligned_cols=62 Identities=18% Similarity=0.135 Sum_probs=37.1
Q ss_pred EEEEeCCCCC--chHHHHHHHhhcCCCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCC
Q 012560 137 HIVVDAGNGA--GGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDV 209 (461)
Q Consensus 137 kVvvd~~~G~--~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~Dg 209 (461)
||++-+-|+- -...+.+.|++.|++|+. +. +++ ... +..-..+.+.|.+..+++||.++|-|
T Consensus 2 kI~igsDhaG~~lK~~l~~~L~~~g~eV~D-~G--~~~---~dy-----pd~a~~va~~V~~~e~~~GIliCGtG 65 (141)
T PRK12613 2 AIILGADAHGNALKELIKSFLQEEGYDIID-VT--DIN---SDF-----IDNTLAVAKAVNEAEGRLGIMVDAYG 65 (141)
T ss_pred EEEEEeCcchHHHHHHHHHHHHHCCCEEEE-cC--CCC---CCh-----HHHHHHHHHHHHcCCCceEEEEcCCC
Confidence 5777777653 344667788889998863 22 211 111 22234677777777777777766554
No 55
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=50.23 E-value=27 Score=34.96 Aligned_cols=61 Identities=13% Similarity=0.243 Sum_probs=37.2
Q ss_pred CCcEEEEeCCCCCc-hHHHHH---HHhhcCCC--cccceecCCCCCCCCCCCCCCchHHHHHHHHHHHh
Q 012560 134 EGFHIVVDAGNGAG-GFFAAK---VLEPLGAK--TSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLD 196 (461)
Q Consensus 134 ~~lkVvvd~~~G~~-~~~~~~---ll~~lg~~--v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~ 196 (461)
.++.|++|+.|++| +..++. .--.+|++ ++ +.|.+||-... ..+..-.++.+..+.+.++.
T Consensus 270 ~~lPVi~DpsH~~G~sd~~~~~a~AAva~GAdGliI-E~H~~pd~Als-D~~qsl~p~~~~~l~~~i~~ 336 (352)
T PRK13396 270 THLPIMIDPSHGTGKSEYVPSMAMAAIAAGTDSLMI-EVHPNPAKALS-DGPQSLTPDRFDRLMQELAV 336 (352)
T ss_pred hCCCEEECCcccCCcHHHHHHHHHHHHhhCCCeEEE-EecCCcccCCC-hhhhcCCHHHHHHHHHHHHH
Confidence 46889999999887 333333 33457888 55 45666666655 33333445556666555554
No 56
>TIGR01120 rpiB ribose 5-phosphate isomerase B. Involved in the non-oxidative branch of the pentose phospate pathway.
Probab=50.12 E-value=60 Score=28.08 Aligned_cols=65 Identities=15% Similarity=0.038 Sum_probs=33.5
Q ss_pred EEEEeCCCCC--chHHHHHHHhhcCCCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCC
Q 012560 137 HIVVDAGNGA--GGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDV 209 (461)
Q Consensus 137 kVvvd~~~G~--~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~Dg 209 (461)
||++-+-|+. -...+.+.|++.|.+|+. +.+..+. +.. . +..-..+.+.|.+..+|+||.++|-|
T Consensus 1 kI~igsDhaG~~lK~~l~~~L~~~g~eV~D-~G~~~~~--~~d--Y---pd~a~~va~~V~~~~~~~GIliCGtG 67 (143)
T TIGR01120 1 KIAIGSDHAGFILKEEIKAFLVERGVKVID-KGTWSSE--RTD--Y---PHYAKQVALAVAGGEVDGGILICGTG 67 (143)
T ss_pred CEEEEeCcchHHHHHHHHHHHHHCCCEEEE-eCCCCCC--CCC--H---HHHHHHHHHHHHCCCCceEEEEcCCc
Confidence 3555555542 344667778899998762 2111100 111 1 22224566667666666666655443
No 57
>TIGR01119 lacB galactose-6-phosphate isomerase, LacB subunit. This family contains four members from low GC gram-positive bacteria. Galactose-6-phosphate isomerase is involved in lactose catabolism by the tagatose-6-phosphate pathway.
Probab=49.92 E-value=68 Score=28.63 Aligned_cols=102 Identities=14% Similarity=0.089 Sum_probs=53.0
Q ss_pred EEEEeCCCCC--chHHHHHHHhhcCCCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEE
Q 012560 137 HIVVDAGNGA--GGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAA 214 (461)
Q Consensus 137 kVvvd~~~G~--~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~ 214 (461)
||++-+-|.. -...+.+.|++.|.+|+. +. ++..=+.. . +..-..+.+.|.+..+|+||.++|-|
T Consensus 2 kI~igsDhaG~~lK~~l~~~L~~~G~eV~D-~G--~~~~~~~d--Y---pd~a~~va~~V~~g~~~~GIliCGTG----- 68 (171)
T TIGR01119 2 KIAIGCDHIVTDVKMEVSEFLKSKGYEVLD-VG--TYDFTRTH--Y---PIFGKKVGEAVVSGEADLGVCICGTG----- 68 (171)
T ss_pred EEEEEeCCchHHHHHHHHHHHHHCCCEEEE-eC--CCCCCCCC--h---HHHHHHHHHHHHcCCCCEEEEEcCCc-----
Confidence 6777777753 344667778889998862 21 11100111 1 22234566777766666776665544
Q ss_pred EcCCCccccchhHHHHHHHHHHHhCCCCeEEEeccCChhHHHHHHHHcCCeEEE
Q 012560 215 VDSTGHELNRNRLIALMSAIVLEEHPGTTIVTDSVTSDGLTTFIEKKLGGKHHR 268 (461)
Q Consensus 215 vd~~G~~l~~d~~~~L~~~~~l~~~~~~~vv~~~~ss~~~~~~ia~~~g~~v~~ 268 (461)
-|-.+ +. .+-++|.+..+++........+.+++.+..
T Consensus 69 ---iG~si---------aA-----NKv~GIRAAl~~d~~sA~~ar~hNnaNVL~ 105 (171)
T TIGR01119 69 ---VGINN---------AV-----NKVPGVRSALVRDMTSALYAKEELNANVIG 105 (171)
T ss_pred ---HHHHH---------HH-----hcCCCeEEEEeCCHHHHHHHHHhcCCcEEE
Confidence 12111 11 133457766666665544443444555544
No 58
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed
Probab=48.90 E-value=36 Score=33.88 Aligned_cols=61 Identities=13% Similarity=0.214 Sum_probs=38.9
Q ss_pred CCcEEEEeCCCCCch----HHHHHHHhhcCCC--cccceecCCCCCCCCCCCCCCchHHHHHHHHHHHh
Q 012560 134 EGFHIVVDAGNGAGG----FFAAKVLEPLGAK--TSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLD 196 (461)
Q Consensus 134 ~~lkVvvd~~~G~~~----~~~~~ll~~lg~~--v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~ 196 (461)
..+.|++|+.|+.+. ..++..--.+|++ ++ +.|.+||-..+. .+..-.++.+..+.+.++.
T Consensus 261 ~~lPVi~d~sH~~G~~~~v~~~a~AAvA~GAdGliI-E~H~~pd~alsD-~~~sl~p~e~~~lv~~i~~ 327 (335)
T PRK08673 261 THLPVIVDPSHATGKRDLVEPLALAAVAAGADGLIV-EVHPDPEKALSD-GPQSLTPEEFEELMKKLRA 327 (335)
T ss_pred cCCCEEEeCCCCCccccchHHHHHHHHHhCCCEEEE-EecCCcccCCCc-chhcCCHHHHHHHHHHHHH
Confidence 468899999999887 2455555678998 55 466677666643 3333345555666555543
No 59
>PTZ00215 ribose 5-phosphate isomerase; Provisional
Probab=48.69 E-value=81 Score=27.52 Aligned_cols=66 Identities=11% Similarity=0.021 Sum_probs=37.1
Q ss_pred cEEEEeCCCCC--chHHHHHHHhh--cCCCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCC
Q 012560 136 FHIVVDAGNGA--GGFFAAKVLEP--LGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDV 209 (461)
Q Consensus 136 lkVvvd~~~G~--~~~~~~~ll~~--lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~Dg 209 (461)
.||++-+-|+- -...+.+.|++ .|++|+. + .++..=+... +..-..+.+.|.+..+++||.++|-|
T Consensus 3 mkI~igsDhaG~~lK~~l~~~L~~~~~g~eV~D-~--G~~~~~~~dY-----p~~a~~va~~V~~~~~~~GIliCGtG 72 (151)
T PTZ00215 3 KKVAIGSDHAGFDLKNEIIDYIKNKGKEYKIED-M--GTYTAESVDY-----PDFAEKVCEEVLKGEADTGILVCGSG 72 (151)
T ss_pred cEEEEEeCCchHHHHHHHHHHHHhccCCCEEEE-c--CCCCCCCCCH-----HHHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 47888887763 34466777888 9998862 2 1211001111 22234566677766666666665443
No 60
>PRK12613 galactose-6-phosphate isomerase subunit LacA; Provisional
Probab=48.42 E-value=29 Score=29.94 Aligned_cols=24 Identities=13% Similarity=0.288 Sum_probs=21.2
Q ss_pred HHHHHHHHHHhCCCcEEEeCCCCc
Q 012560 2 LQDAVSRGITGAGLDVVQYGLAST 25 (461)
Q Consensus 2 l~~a~~~gL~s~Gi~V~~~g~~~t 25 (461)
||+.+..-|.+.|++|.|+|.-++
T Consensus 14 lK~~l~~~L~~~g~eV~D~G~~~~ 37 (141)
T PRK12613 14 LKELIKSFLQEEGYDIIDVTDINS 37 (141)
T ss_pred HHHHHHHHHHHCCCEEEEcCCCCC
Confidence 789999999999999999997444
No 61
>PF04028 DUF374: Domain of unknown function (DUF374); InterPro: IPR007172 This is a bacterial domain of unknown function.
Probab=48.14 E-value=1.1e+02 Score=23.11 Aligned_cols=59 Identities=20% Similarity=0.261 Sum_probs=39.0
Q ss_pred CCcEEEEeCCCCCchHHHHHHHhhcCCCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCC
Q 012560 134 EGFHIVVDAGNGAGGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDT 207 (461)
Q Consensus 134 ~~lkVvvd~~~G~~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~ 207 (461)
.++.++++... -+.++..+++.+|.+++. -.... .-..+|.++.+.++ .+.++++.-||
T Consensus 10 ~~~~~lvS~s~--DGe~ia~~~~~~G~~~iR-GSs~r-----------gg~~Alr~~~~~lk-~G~~~~itpDG 68 (74)
T PF04028_consen 10 RKIAALVSRSR--DGELIARVLERFGFRTIR-GSSSR-----------GGARALREMLRALK-EGYSIAITPDG 68 (74)
T ss_pred CCEEEEEccCc--CHHHHHHHHHHcCCCeEE-eCCCC-----------cHHHHHHHHHHHHH-CCCeEEEeCCC
Confidence 44555565443 567899999999998863 11111 11567888888888 67788888553
No 62
>PF12909 DUF3832: Protein of unknown function (DUF3832); InterPro: IPR024308 This domain found in bacteria and Acanthamoeba polyphaga mimivirus (APMV) L591 protein has no known function. In Q0AZ30 from SWISSPROT and other uncharacterised proteins this domain is found C-terminal, while the N terminus shows remote homology to the bacterial toxin/antitoxin 'addiction module' (PF12910 from PFAM).; PDB: 3K6Q_C.
Probab=47.68 E-value=26 Score=27.62 Aligned_cols=48 Identities=15% Similarity=0.210 Sum_probs=28.3
Q ss_pred EecCeEEEEEecCCCceeEEEEeeCCHHH-HHHHHHHHHHHhhcCCCCCchHHHHHH
Q 012560 403 SGSGGWFLLRLSLHDPVLPLNIEAPSRED-AVKLGLAVAAATKEFPALDTSALDKFV 458 (461)
Q Consensus 403 ~~~~~w~liRpSgTeP~irvy~Ea~~~~~-a~~l~~~~~~~v~~~~~~~~~~~~~~~ 458 (461)
..+|||+.+--.+ +.||++++|.+. .+++.+.+++--++| ++-++.|.
T Consensus 13 ~e~dg~~~~~l~~----ldi~~~g~T~eeA~~~lie~l~dYAedy----~~~~~~~~ 61 (89)
T PF12909_consen 13 IEDDGSITVSLPE----LDIYANGPTLEEAIEDLIEDLRDYAEDY----MNRFPLFY 61 (89)
T ss_dssp EEETTEEEEEECC----GTEEEEESSHHHHHHHHHHHHHHHHHHH----HHTHHHHH
T ss_pred ecCCCeEEEEecC----eeEEecCCCHHHHHHHHHHHHHHHHHHH----HHHHHHHh
Confidence 3578998555544 449999999755 444444444444443 34444444
No 63
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=46.39 E-value=42 Score=32.27 Aligned_cols=61 Identities=20% Similarity=0.272 Sum_probs=37.6
Q ss_pred CCcEEEEeCCCCCch----HHHHHHHhhcCCC--cccceecCCCCCCCCCCCCCCchHHHHHHHHHHHh
Q 012560 134 EGFHIVVDAGNGAGG----FFAAKVLEPLGAK--TSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLD 196 (461)
Q Consensus 134 ~~lkVvvd~~~G~~~----~~~~~ll~~lg~~--v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~ 196 (461)
.++.|++||.|+.+. ..++..--.+|++ ++ +.|..||-..+. ++..-.++.|..+.+.+++
T Consensus 195 ~~~pV~~D~sHs~G~~~~v~~~~~aAva~Ga~Gl~i-E~H~~pd~a~~D-~~~sl~p~~l~~l~~~i~~ 261 (266)
T PRK13398 195 SHLPIIVDPSHATGRRELVIPMAKAAIAAGADGLMI-EVHPEPEKALSD-ARQTLNFEEMKELVDELKP 261 (266)
T ss_pred cCCCEEEeCCCcccchhhHHHHHHHHHHcCCCEEEE-eccCCccccCCc-hhhcCCHHHHHHHHHHHHH
Confidence 468899999999984 3334444678988 55 456677666543 2333334545555555543
No 64
>PF02502 LacAB_rpiB: Ribose/Galactose Isomerase; InterPro: IPR003500 This entry represents the sugar isomerase enzymes ribose 5-phosphate isomerase B (rpiB), galactose isomerase subunit A (LacA) and galactose isomerase subunit B (LacB). Galactose-6-phosphate isomerase (5.3.1.26 from EC) is a heteromultimeric protein consisting of subunits LacA and LacB, and catalyses the conversion of D-galactose 6-phosphate to D-tagatose and 6-phosphate in the tagatose 6-phosphate pathway of lactose catabolism []. Galactose-6-phosphate isomerase is induced by galactose or lactose. This entry represents the LacB subunit. Ribose 5-phosphate isomerase (5.3.1.6 from EC) forms a homodimer and catalyses the interconversion of D-ribose 5-phosphate and D-ribulose 5-phosphate in the non-oxidative branch of the pentose phosphate pathway. This reaction permits the synthesis of ribose from other sugars, as well as the recycling of sugars from nucleotide breakdown. Two unrelated enzymes can catalyse this reaction: RpiA (found in most organisms) and RpiB (found in some bacteria and eukaryotes). RpiB is also involved in metabolism of the rare sugar, allose, in addition to ribose sugars. The structures of RpiA and RpiB are distinct, RpiB having a Rossmann-type alpha/beta/alpha sandwich topology [].; GO: 0005975 carbohydrate metabolic process; PDB: 3HEE_A 3HE8_A 3PH3_B 3PH4_B 3ONO_A 4EM8_B 3S5P_B 1O1X_A 2BES_D 2VVP_D ....
Probab=42.83 E-value=36 Score=29.27 Aligned_cols=65 Identities=15% Similarity=0.053 Sum_probs=34.5
Q ss_pred EEEEeCCCCC--chHHHHHHHhhcCCCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCC
Q 012560 137 HIVVDAGNGA--GGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDV 209 (461)
Q Consensus 137 kVvvd~~~G~--~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~Dg 209 (461)
||++-+.|+. -...+...|++.|.+|+. +.... +. +. .-+..-..+.+.|.+..+|+||.+++-|
T Consensus 1 KI~igsDh~g~~lK~~i~~~L~~~g~eV~D-~G~~~-~~-~~-----dy~~~a~~va~~V~~~~~d~GIliCgtG 67 (140)
T PF02502_consen 1 KIAIGSDHAGFELKEAIKEYLEEKGYEVID-FGTYS-ED-SV-----DYPDFAEKVAEAVASGEADRGILICGTG 67 (140)
T ss_dssp EEEEEE-GGGHHHHHHHHHHHHHTTEEEEE-ESESS-TS-T-------HHHHHHHHHHHHHTTSSSEEEEEESSS
T ss_pred CEEEEeCHHHHHHHHHHHHHHHHCCCEEEE-eCCCC-CC-CC-----CHHHHHHHHHHHHHcccCCeEEEEcCCC
Confidence 4666555532 344677778888998862 22111 11 10 1133334667777776666666665443
No 65
>PF09981 DUF2218: Uncharacterized protein conserved in bacteria (DUF2218); InterPro: IPR014543 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.; PDB: 2JPI_A.
Probab=42.24 E-value=1.7e+02 Score=22.98 Aligned_cols=69 Identities=23% Similarity=0.219 Sum_probs=47.5
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCcc-cCceEEEecCeEEEEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcCC
Q 012560 373 GEAVLKHLENRVDSDPKLQKAPVN-YEGVRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFP 447 (461)
Q Consensus 373 ~~~v~~~l~~~~~~~~~~~~~~~~-~dGlki~~~~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v~~~~ 447 (461)
..+.+++|.+.+..+ . .++. -+.-++.|+.|-..+++ +...+.+.+||.|++...++..-+.+.+..+-
T Consensus 10 ~~ryl~qLc~Hf~hk--~--~v~~d~~~g~i~f~~G~~~l~a--~~~~L~l~vea~~~~~L~~~~~vv~~HL~rFa 79 (89)
T PF09981_consen 10 ASRYLKQLCKHFAHK--F--EVEWDEDSGRITFPFGTCTLSA--EPDALTLRVEAPDAEALARLEDVVARHLERFA 79 (89)
T ss_dssp HHHHHHHHHHHTTTS--S--EEEE-SSEEEEE-SSS-EEEEE--ETTEEEEEEEESSHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhcCC--C--ceEEcCCceEEEeCCEEEEEEe--CCCeEEEEEEeCCHHHHHHHHHHHHHHHHHHh
Confidence 357888888766432 1 1221 13457778888777766 55678999999999999999888888887764
No 66
>TIGR01123 ilvE_II branched-chain amino acid aminotransferase, group II. Among the class IV aminotransferases are two phylogenetically separable groups of branched-chain amino acid aminotransferase (IlvE). The last common ancestor of the two lineages appears also to have given rise to a family of D-amino acid aminotransferases (DAAT). This model represents the IlvE family less similar to the DAAT family.
Probab=42.07 E-value=1.1e+02 Score=29.89 Aligned_cols=73 Identities=14% Similarity=0.135 Sum_probs=47.9
Q ss_pred HHHHHhcCCcEEEeeCCCCc---------eeEEEcCCCccccchhHHHHHHHHHHHhCCCCeEEEeccCChhHHHHHHHH
Q 012560 191 IQAVLDNKADLGIIFDTDVD---------RSAAVDSTGHELNRNRLIALMSAIVLEEHPGTTIVTDSVTSDGLTTFIEKK 261 (461)
Q Consensus 191 ~~~v~~~~adlgia~D~DgD---------R~~~vd~~G~~l~~d~~~~L~~~~~l~~~~~~~vv~~~~ss~~~~~~ia~~ 261 (461)
.+.+++.++|=++.+|+||+ -++++..+|.+++|.. ...++ .-++-..+++ ++++
T Consensus 167 ~~eA~~~g~deal~ld~~g~g~v~E~~~sNlf~v~~~g~l~Tp~l--------------~~~~L-~GItR~~vi~-l~~~ 230 (313)
T TIGR01123 167 QAKAAEQGCDQVVYLDPVEHTYIEEVGAMNFFFITGDGELVTPPL--------------SGSIL-PGITRDSLLQ-LAKD 230 (313)
T ss_pred HHHHHHCCCCEEEEEeCCCCeEEEEcCcEeEEEEEcCCEEEeCCC--------------CCCCC-cchHHHHHHH-HHHH
Confidence 55677889999999999987 4455554556666641 11122 2222334444 6677
Q ss_pred cCCeEEEEecchHHHHHH
Q 012560 262 LGGKHHRFKRGYKNVIDE 279 (461)
Q Consensus 262 ~g~~v~~t~~G~k~i~~~ 279 (461)
.|.++.+.+.....+.+.
T Consensus 231 ~Gi~v~e~~i~~~~l~~A 248 (313)
T TIGR01123 231 LGMEVEERRIDIDELKAF 248 (313)
T ss_pred cCCeEEEEecCHHHHHHH
Confidence 899999999998876553
No 67
>PRK05571 ribose-5-phosphate isomerase B; Provisional
Probab=40.89 E-value=45 Score=29.03 Aligned_cols=21 Identities=19% Similarity=0.450 Sum_probs=19.7
Q ss_pred HHHHHHHHHHhCCCcEEEeCC
Q 012560 2 LQDAVSRGITGAGLDVVQYGL 22 (461)
Q Consensus 2 l~~a~~~gL~s~Gi~V~~~g~ 22 (461)
||+.+..-|.+.|++|.|+|.
T Consensus 14 lK~~l~~~L~~~g~eV~D~G~ 34 (148)
T PRK05571 14 LKEEIIEHLEELGHEVIDLGP 34 (148)
T ss_pred HHHHHHHHHHHCCCEEEEcCC
Confidence 789999999999999999985
No 68
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=39.52 E-value=32 Score=29.14 Aligned_cols=26 Identities=27% Similarity=0.443 Sum_probs=21.5
Q ss_pred HHHHHHHHHhCCCcEEEeCCCCchhh
Q 012560 3 QDAVSRGITGAGLDVVQYGLASTPAM 28 (461)
Q Consensus 3 ~~a~~~gL~s~Gi~V~~~g~~~tP~~ 28 (461)
|+.++..|.++|++|+++|..-+|.-
T Consensus 16 kniv~~~L~~~GfeVidLG~~v~~e~ 41 (128)
T cd02072 16 NKILDHAFTEAGFNVVNLGVLSPQEE 41 (128)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHH
Confidence 56788899999999999997666553
No 69
>TIGR00689 rpiB_lacA_lacB sugar-phosphate isomerases, RpiB/LacA/LacB family. Proteins of known function in this family act as sugar (pentose and/or hexose)-phosphate isomerases, including the LacA and LacB subunits of galactose-6-phosphate isomerases from Gram-positive bacteria and RpiB. RpiB is the second ribose phosphate isomerase of E. coli. It lacks homology to RpiA, its inducer is unknown (but is not ribose), and it can be replaced by the homologous galactose-6-phosphate isomerase of Streptococcus mutans, all of which suggests that the ribose phosphate isomerase activity of RpiB is a secondary function. On the other hand, there appear to be a significant number of species which contain rpiB, lack rpiA and seem to require rpi activity in order to copplete the pentose phosphate pathway.
Probab=37.64 E-value=53 Score=28.43 Aligned_cols=21 Identities=19% Similarity=0.436 Sum_probs=19.7
Q ss_pred HHHHHHHHHHhCCCcEEEeCC
Q 012560 2 LQDAVSRGITGAGLDVVQYGL 22 (461)
Q Consensus 2 l~~a~~~gL~s~Gi~V~~~g~ 22 (461)
||+.+..-|.+.|.+|.|+|.
T Consensus 12 lK~~l~~~L~~~g~eV~D~G~ 32 (144)
T TIGR00689 12 LKSEIIEHLKQKGHEVIDCGT 32 (144)
T ss_pred HHHHHHHHHHHCCCEEEEcCC
Confidence 789999999999999999986
No 70
>PRK08868 flagellar protein FlaG; Provisional
Probab=36.61 E-value=1.3e+02 Score=26.03 Aligned_cols=51 Identities=12% Similarity=0.302 Sum_probs=40.6
Q ss_pred hHHHHHHHHHHHhcCCcEEEeeCCCCceeEE--EcC-CC---ccccchhHHHHHHHH
Q 012560 184 KTAMKAIIQAVLDNKADLGIIFDTDVDRSAA--VDS-TG---HELNRNRLIALMSAI 234 (461)
Q Consensus 184 ~~~l~~l~~~v~~~~adlgia~D~DgDR~~~--vd~-~G---~~l~~d~~~~L~~~~ 234 (461)
..+++.+-+.+...+-+|=|.+|.|.+|+.+ +|. +| |-|.+++++.|...+
T Consensus 74 ~~aVeklNe~~~~~n~~L~F~vdeetgr~VVkViD~~T~EVIRQIP~Ee~L~la~~l 130 (144)
T PRK08868 74 EKMVEQMNEFVKSINKGLSFRVDEESGRDVVTIYEASTGDIIRQIPDEEMLEVLRRL 130 (144)
T ss_pred HHHHHHHHHHHHhhcCceEEEEecCCCCEEEEEEECCCCceeeeCCCHHHHHHHHHH
Confidence 3556677777888889999999999999987 554 56 678889999988765
No 71
>TIGR00689 rpiB_lacA_lacB sugar-phosphate isomerases, RpiB/LacA/LacB family. Proteins of known function in this family act as sugar (pentose and/or hexose)-phosphate isomerases, including the LacA and LacB subunits of galactose-6-phosphate isomerases from Gram-positive bacteria and RpiB. RpiB is the second ribose phosphate isomerase of E. coli. It lacks homology to RpiA, its inducer is unknown (but is not ribose), and it can be replaced by the homologous galactose-6-phosphate isomerase of Streptococcus mutans, all of which suggests that the ribose phosphate isomerase activity of RpiB is a secondary function. On the other hand, there appear to be a significant number of species which contain rpiB, lack rpiA and seem to require rpi activity in order to copplete the pentose phosphate pathway.
Probab=36.11 E-value=1.1e+02 Score=26.54 Aligned_cols=53 Identities=15% Similarity=0.026 Sum_probs=28.4
Q ss_pred hHHHHHHHhhcCCCcccceecCCCCCCCCCCCCCCc-hHHHHHHHHHHHhcCCcEEEeeCCCC
Q 012560 148 GFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPED-KTAMKAIIQAVLDNKADLGIIFDTDV 209 (461)
Q Consensus 148 ~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~-~~~l~~l~~~v~~~~adlgia~D~Dg 209 (461)
...+.+.|++.|.+|+. +. +.. .+|.+ +..-..+.+.|.+..+|+||.++|-|
T Consensus 13 K~~l~~~L~~~g~eV~D-~G--~~~------~~~~dYpd~a~~va~~V~~g~~~~GIliCGtG 66 (144)
T TIGR00689 13 KSEIIEHLKQKGHEVID-CG--TLY------DERVDYPDYAKLVADKVVAGEVSLGILICGTG 66 (144)
T ss_pred HHHHHHHHHHCCCEEEE-cC--CCC------CCCCChHHHHHHHHHHHHcCCCceEEEEcCCc
Confidence 34567778888998762 21 110 01111 22234566677666666666665443
No 72
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=35.81 E-value=39 Score=28.84 Aligned_cols=26 Identities=27% Similarity=0.459 Sum_probs=21.2
Q ss_pred HHHHHHHHHhCCCcEEEeCCCCchhh
Q 012560 3 QDAVSRGITGAGLDVVQYGLASTPAM 28 (461)
Q Consensus 3 ~~a~~~gL~s~Gi~V~~~g~~~tP~~ 28 (461)
++-++..|.++|++|+++|...+|.-
T Consensus 18 k~iv~~~l~~~GfeVi~LG~~v~~e~ 43 (134)
T TIGR01501 18 NKILDHAFTNAGFNVVNLGVLSPQEE 43 (134)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHH
Confidence 46678899999999999997666653
No 73
>TIGR01120 rpiB ribose 5-phosphate isomerase B. Involved in the non-oxidative branch of the pentose phospate pathway.
Probab=35.78 E-value=62 Score=27.98 Aligned_cols=21 Identities=19% Similarity=0.422 Sum_probs=19.7
Q ss_pred HHHHHHHHHHhCCCcEEEeCC
Q 012560 2 LQDAVSRGITGAGLDVVQYGL 22 (461)
Q Consensus 2 l~~a~~~gL~s~Gi~V~~~g~ 22 (461)
||+.+.+-|.+.|.+|.|+|.
T Consensus 13 lK~~l~~~L~~~g~eV~D~G~ 33 (143)
T TIGR01120 13 LKEEIKAFLVERGVKVIDKGT 33 (143)
T ss_pred HHHHHHHHHHHCCCEEEEeCC
Confidence 789999999999999999986
No 74
>TIGR01119 lacB galactose-6-phosphate isomerase, LacB subunit. This family contains four members from low GC gram-positive bacteria. Galactose-6-phosphate isomerase is involved in lactose catabolism by the tagatose-6-phosphate pathway.
Probab=34.18 E-value=66 Score=28.71 Aligned_cols=21 Identities=24% Similarity=0.376 Sum_probs=19.7
Q ss_pred HHHHHHHHHHhCCCcEEEeCC
Q 012560 2 LQDAVSRGITGAGLDVVQYGL 22 (461)
Q Consensus 2 l~~a~~~gL~s~Gi~V~~~g~ 22 (461)
||+.+..-|.+.|++|.|+|.
T Consensus 14 lK~~l~~~L~~~G~eV~D~G~ 34 (171)
T TIGR01119 14 VKMEVSEFLKSKGYEVLDVGT 34 (171)
T ss_pred HHHHHHHHHHHCCCEEEEeCC
Confidence 789999999999999999985
No 75
>PRK01964 4-oxalocrotonate tautomerase; Provisional
Probab=33.65 E-value=69 Score=23.05 Aligned_cols=33 Identities=18% Similarity=0.249 Sum_probs=27.8
Q ss_pred ceeEEE-EeeCCHHHHHHHHHHHHHHhhcCCCCC
Q 012560 418 PVLPLN-IEAPSREDAVKLGLAVAAATKEFPALD 450 (461)
Q Consensus 418 P~irvy-~Ea~~~~~a~~l~~~~~~~v~~~~~~~ 450 (461)
|.++|+ .++.|.+.-+++.+.+.+.+.+.+.+.
T Consensus 2 P~v~i~l~~grt~eqk~~l~~~it~~l~~~lg~p 35 (64)
T PRK01964 2 PIVQIQLLEGRPEEKIKNLIREVTEAISATLDVP 35 (64)
T ss_pred CEEEEEEeCCCCHHHHHHHHHHHHHHHHHHhCcC
Confidence 889999 588999999999999999888766544
No 76
>PTZ00215 ribose 5-phosphate isomerase; Provisional
Probab=33.37 E-value=68 Score=27.99 Aligned_cols=21 Identities=14% Similarity=0.251 Sum_probs=19.5
Q ss_pred HHHHHHHHHHh--CCCcEEEeCC
Q 012560 2 LQDAVSRGITG--AGLDVVQYGL 22 (461)
Q Consensus 2 l~~a~~~gL~s--~Gi~V~~~g~ 22 (461)
||+.+..-|.+ .|++|.|+|.
T Consensus 16 lK~~l~~~L~~~~~g~eV~D~G~ 38 (151)
T PTZ00215 16 LKNEIIDYIKNKGKEYKIEDMGT 38 (151)
T ss_pred HHHHHHHHHHhccCCCEEEEcCC
Confidence 78999999999 9999999985
No 77
>cd00491 4Oxalocrotonate_Tautomerase 4-Oxalocrotonate Tautomerase: Catalyzes the isomerization of unsaturated ketones. The structure is a homohexamer that is arranged as a trimer of dimers. The hexamer contains six active sites, each formed by residues from three monomers, two from one dimer and the third from a neighboring monomer. Each monomer is a beta-alpha-beta fold with two small beta strands at the C-terminus that fold back on themselves. A pair of monomers form a dimer with two-fold symmetry, consisting of a 4-stranded beta sheet with two helices on one side and two additional small beta strands at each end. The dimers are assembled around a 3-fold axis of rotation to form a hexamer, with the short beta strands from each dimer contacting the neighboring dimers.
Probab=33.28 E-value=63 Score=22.47 Aligned_cols=31 Identities=23% Similarity=0.288 Sum_probs=25.8
Q ss_pred ceeEEE-EeeCCHHHHHHHHHHHHHHhhcCCC
Q 012560 418 PVLPLN-IEAPSREDAVKLGLAVAAATKEFPA 448 (461)
Q Consensus 418 P~irvy-~Ea~~~~~a~~l~~~~~~~v~~~~~ 448 (461)
|.++|+ .++.+.+.-+++.+.+.+.+.+.+.
T Consensus 1 P~i~i~~~~grt~eqk~~l~~~i~~~l~~~~g 32 (58)
T cd00491 1 PFVQIYILEGRTDEQKRELIERVTEAVSEILG 32 (58)
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhC
Confidence 788999 5678999999999999988877653
No 78
>COG0860 AmiC N-acetylmuramoyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]
Probab=33.18 E-value=1.1e+02 Score=28.65 Aligned_cols=64 Identities=20% Similarity=0.251 Sum_probs=40.3
Q ss_pred CCCcEEEEeCCCCC-----c--------------hHHHHHHHhhcCCCcccceecCCCCCCCCCCCCCCchHHHHHHHHH
Q 012560 133 LEGFHIVVDAGNGA-----G--------------GFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQA 193 (461)
Q Consensus 133 ~~~lkVvvd~~~G~-----~--------------~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~ 193 (461)
..+.+|++|++||- . +..+...|++.|.+++- ...+..|. .|.+=.+.
T Consensus 40 ~~~~~I~IDpGHGG~D~GAig~~g~~EKdvtL~ia~~l~~~L~~~g~~v~m---TR~~D~~~----------~l~~R~~~ 106 (231)
T COG0860 40 LGGKTIVIDPGHGGKDPGAIGPNGTLEKDVTLDIAKRLRDLLRAEGVEVVL---TRTSDTFV----------SLNERVAI 106 (231)
T ss_pred CCCeEEEEcCCCCCCCCCccCCCCCccceeHHHHHHHHHHHHHhCCCEEEE---ecCCCCcC----------CHHHHHHH
Confidence 45789999999983 1 12455667777765541 23333332 24445556
Q ss_pred HHhcCCcEEEeeCCCC
Q 012560 194 VLDNKADLGIIFDTDV 209 (461)
Q Consensus 194 v~~~~adlgia~D~Dg 209 (461)
+...++|+-+.+-.|+
T Consensus 107 A~~~~adlfiSIH~na 122 (231)
T COG0860 107 ANASGADLFVSIHANA 122 (231)
T ss_pred HHhcCCCEEEEEecCC
Confidence 7777899988887665
No 79
>PRK08621 galactose-6-phosphate isomerase subunit LacA; Reviewed
Probab=33.15 E-value=87 Score=27.05 Aligned_cols=21 Identities=19% Similarity=0.229 Sum_probs=19.8
Q ss_pred HHHHHHHHHHhCCCcEEEeCC
Q 012560 2 LQDAVSRGITGAGLDVVQYGL 22 (461)
Q Consensus 2 l~~a~~~gL~s~Gi~V~~~g~ 22 (461)
||+.+.+-|.+.|++|.|+|.
T Consensus 14 lK~~l~~~L~~~G~eV~D~G~ 34 (142)
T PRK08621 14 LKEVVKDYLEDNKYEVVDVTE 34 (142)
T ss_pred HHHHHHHHHHHCCCEEEECCC
Confidence 789999999999999999986
No 80
>TIGR01118 lacA galactose-6-phosphate isomerase, LacA subunit. This family contains members from low GC gram-positive bacteria. Galactose-6-phosphate isomerase is involved in lactose catabolism by the tagatose-6-phosphate pathway.
Probab=32.91 E-value=69 Score=27.62 Aligned_cols=21 Identities=19% Similarity=0.396 Sum_probs=19.7
Q ss_pred HHHHHHHHHHhCCCcEEEeCC
Q 012560 2 LQDAVSRGITGAGLDVVQYGL 22 (461)
Q Consensus 2 l~~a~~~gL~s~Gi~V~~~g~ 22 (461)
||+.+..-|.+.|++|.|+|.
T Consensus 14 lK~~i~~~L~~~G~eV~D~G~ 34 (141)
T TIGR01118 14 LKDVIKNFLVDNGFEVIDVTE 34 (141)
T ss_pred HHHHHHHHHHHCCCEEEEcCC
Confidence 789999999999999999986
No 81
>PF05991 NYN_YacP: YacP-like NYN domain; InterPro: IPR010298 This family consists of several hypothetical bacterial proteins as well as some uncharacterised sequences from Arabidopsis thaliana. The function of this family is unknown.
Probab=32.78 E-value=1.7e+02 Score=25.86 Aligned_cols=23 Identities=9% Similarity=0.134 Sum_probs=15.4
Q ss_pred HHHHHHHHHhcCCcEEEeeCCCC
Q 012560 187 MKAIIQAVLDNKADLGIIFDTDV 209 (461)
Q Consensus 187 l~~l~~~v~~~~adlgia~D~Dg 209 (461)
++.|.......+..+.++||+-.
T Consensus 32 i~~L~~y~~~~~~~v~VVFDa~~ 54 (166)
T PF05991_consen 32 IEMLSEYAQFSGYEVIVVFDAYK 54 (166)
T ss_pred HHHHHHHhcccCCEEEEEEeCCc
Confidence 34444555567788999999743
No 82
>COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family [Energy production and conversion]
Probab=32.12 E-value=1.2e+02 Score=30.17 Aligned_cols=62 Identities=16% Similarity=0.221 Sum_probs=43.7
Q ss_pred cEEEEeCCCCCch--HHHHHHHhhcC-CCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCC
Q 012560 136 FHIVVDAGNGAGG--FFAAKVLEPLG-AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDT 207 (461)
Q Consensus 136 lkVvvd~~~G~~~--~~~~~ll~~lg-~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~ 207 (461)
-||.+-+..|+.. ++..++...|. .+++ .|.+.-|||. .+-+....+++++++.||.++.-|
T Consensus 30 ~kVLi~YGGGSIKrnGvydqV~~~Lkg~~~~---------E~~GVEPNP~-~~Tv~kaV~i~kee~idflLAVGG 94 (384)
T COG1979 30 AKVLIVYGGGSIKKNGVYDQVVEALKGIEVI---------EFGGVEPNPR-LETLMKAVEICKEENIDFLLAVGG 94 (384)
T ss_pred CeEEEEecCccccccchHHHHHHHhcCceEE---------EecCCCCCch-HHHHHHHHHHHHHcCceEEEEecC
Confidence 4788888877643 36666666664 4433 3456678887 456777888999999999999754
No 83
>PHA00689 hypothetical protein
Probab=31.67 E-value=35 Score=23.35 Aligned_cols=15 Identities=40% Similarity=1.019 Sum_probs=11.4
Q ss_pred CceEEEecCe-EEEEE
Q 012560 398 EGVRVSGSGG-WFLLR 412 (461)
Q Consensus 398 dGlki~~~~~-w~liR 412 (461)
-|+|+..++| |+|+-
T Consensus 26 tglrweddggewvlme 41 (62)
T PHA00689 26 TGLRWEDDGGEWVLME 41 (62)
T ss_pred cCceeecCCCcEEEEe
Confidence 5899987655 99874
No 84
>PF14028 SpaB_C: SpaB C-terminal domain
Probab=31.53 E-value=63 Score=30.96 Aligned_cols=25 Identities=24% Similarity=0.493 Sum_probs=22.0
Q ss_pred CeEEEEEecCCCceeEEEEeeCCHH
Q 012560 406 GGWFLLRLSLHDPVLPLNIEAPSRE 430 (461)
Q Consensus 406 ~~w~liRpSgTeP~irvy~Ea~~~~ 430 (461)
+.|++||-...+|.+|+.+...+.+
T Consensus 37 ~~wFFiRY~d~gpHLRLR~~~~~~~ 61 (283)
T PF14028_consen 37 DRWFFIRYWDPGPHLRLRFRGSPDA 61 (283)
T ss_pred cceEEEecCCCCCeEEEEEECCCcc
Confidence 5799999999999999999887543
No 85
>COG2876 AroA 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]
Probab=31.19 E-value=1.2e+02 Score=29.08 Aligned_cols=63 Identities=13% Similarity=0.109 Sum_probs=39.0
Q ss_pred CCCCcEEEEeCCCCCchHHHHHHH----hhcCCCcccceecCCCCCCCC-CCCCCCchHHHHHHHHHHH
Q 012560 132 PLEGFHIVVDAGNGAGGFFAAKVL----EPLGAKTSGSQFLEPDGMFPN-HIPNPEDKTAMKAIIQAVL 195 (461)
Q Consensus 132 ~~~~lkVvvd~~~G~~~~~~~~ll----~~lg~~v~~~~~~~~d~~f~~-~~p~P~~~~~l~~l~~~v~ 195 (461)
...-|.|++|+.|++++.-+-.-+ ...|++-+ .+.++|||.-.- ..+..-.++.++.+.+.++
T Consensus 211 q~THLPVivDpSH~~Grr~lv~pla~AA~AaGAdgl-miEVHp~P~~AlsD~~Qql~~~~f~~l~~~~~ 278 (286)
T COG2876 211 QETHLPVIVDPSHATGRRDLVEPLAKAAIAAGADGL-MIEVHPDPEKALSDAKQQLTPEEFEELVKELR 278 (286)
T ss_pred hhcCCCEEECCCCcccchhhHHHHHHHHHhccCCee-EEEecCCcccccCcccccCCHHHHHHHHHHHH
Confidence 346789999999999987544443 34566654 345677776543 2344444555666555544
No 86
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=30.44 E-value=49 Score=28.56 Aligned_cols=25 Identities=32% Similarity=0.680 Sum_probs=21.7
Q ss_pred HHHHHHHHhCCCcEEEeCCCCchhh
Q 012560 4 DAVSRGITGAGLDVVQYGLASTPAM 28 (461)
Q Consensus 4 ~a~~~gL~s~Gi~V~~~g~~~tP~~ 28 (461)
+-+++.|.+.|++|+..|...||.=
T Consensus 30 kvia~~l~d~GfeVi~~g~~~tp~e 54 (143)
T COG2185 30 KVIARALADAGFEVINLGLFQTPEE 54 (143)
T ss_pred HHHHHHHHhCCceEEecCCcCCHHH
Confidence 4578899999999999999999863
No 87
>PF01133 ER: Enhancer of rudimentary; InterPro: IPR000781 The Drosophila protein 'enhancer of rudimentary' (gene (e(r)) is a small protein of 104 residues whose function is not yet clear. From an evolutionary point of view, it is highly conserved [] and has been found to exist in probably all multicellular eukaryotic organisms. It has been proposed that this protein plays a role in the cell cycle.; GO: 0007049 cell cycle; PDB: 1W9G_A 2NML_A 1WWQ_A 1WZ7_B.
Probab=30.24 E-value=2.1e+02 Score=23.11 Aligned_cols=52 Identities=19% Similarity=0.113 Sum_probs=38.1
Q ss_pred EEEEEecCCCceeEEEEeeCC-HHHHHHHHHHHHHHhhc------CCCCCchHHHHHHhh
Q 012560 408 WFLLRLSLHDPVLPLNIEAPS-REDAVKLGLAVAAATKE------FPALDTSALDKFVQA 460 (461)
Q Consensus 408 w~liRpSgTeP~irvy~Ea~~-~~~a~~l~~~~~~~v~~------~~~~~~~~~~~~~~~ 460 (461)
-+||.|+ ..|-=|.|++=.| .+..+-++.-|++.+++ -+.-|+|+|=+|+..
T Consensus 5 ILLvQp~-~~~~sRTy~DyeSv~~cmegIC~~YE~~LK~~nP~~~~ItYdIs~Lf~fID~ 63 (102)
T PF01133_consen 5 ILLVQPS-QRPESRTYSDYESVNECMEGICKIYEEHLKRKNPNSPSITYDISDLFDFIDS 63 (102)
T ss_dssp EEEEESS-SSCCC-EEEEESSHHHHHHHHHHHHHHHHHHHSTT-SS----HHHHHHHHHH
T ss_pred EEEEecC-CCCCcceeechhhHHHHHHHHHHHHHHHHHHcCCCCCcccccHHHHHHHHhh
Confidence 4788888 7788999999977 45567789999998876 357789999999864
No 88
>PF15079 DUF4546: Domain of unknown function (DUF4546)
Probab=29.99 E-value=51 Score=28.92 Aligned_cols=17 Identities=29% Similarity=0.428 Sum_probs=15.1
Q ss_pred hhcCCCCCchHHHHHHh
Q 012560 443 TKEFPALDTSALDKFVQ 459 (461)
Q Consensus 443 v~~~~~~~~~~~~~~~~ 459 (461)
|+.++..||.+|++||.
T Consensus 73 IKdiMDKDFDKL~EFVE 89 (205)
T PF15079_consen 73 IKDIMDKDFDKLHEFVE 89 (205)
T ss_pred HHHHHhhhHHHHHHHHH
Confidence 56788999999999996
No 89
>COG0698 RpiB Ribose 5-phosphate isomerase RpiB [Carbohydrate transport and metabolism]
Probab=29.85 E-value=3.8e+02 Score=23.40 Aligned_cols=64 Identities=22% Similarity=0.216 Sum_probs=34.9
Q ss_pred EEEEeCCCCCc--hHHHHHHHhhcCCCcccc--eecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCC
Q 012560 137 HIVVDAGNGAG--GFFAAKVLEPLGAKTSGS--QFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDV 209 (461)
Q Consensus 137 kVvvd~~~G~~--~~~~~~ll~~lg~~v~~~--~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~Dg 209 (461)
||++-+-|... ...+...|++.|.+++.. ...+.+-.| | .--..+...|....+|+||.++|-|
T Consensus 2 kIaig~Dhag~~lK~~I~~~Lk~~g~~v~D~G~~~~~~~~dy----p-----~~a~~va~~v~~~~~d~GIliCGTG 69 (151)
T COG0698 2 KIAIGSDHAGYELKEIIIDHLKSKGYEVIDFGTYTDEGSVDY----P-----DYAKKVAEAVLNGEADLGILICGTG 69 (151)
T ss_pred cEEEEcCcccHHHHHHHHHHHHHCCCEEEeccccCCCCCcch----H-----HHHHHHHHHHHcCCCCeeEEEecCC
Confidence 67777777643 346677788889887620 000111111 2 1123455556655777777766544
No 90
>PRK00745 4-oxalocrotonate tautomerase; Provisional
Probab=29.57 E-value=83 Score=22.32 Aligned_cols=32 Identities=22% Similarity=0.223 Sum_probs=26.3
Q ss_pred ceeEEE-EeeCCHHHHHHHHHHHHHHhhcCCCC
Q 012560 418 PVLPLN-IEAPSREDAVKLGLAVAAATKEFPAL 449 (461)
Q Consensus 418 P~irvy-~Ea~~~~~a~~l~~~~~~~v~~~~~~ 449 (461)
|.++|+ .++.|.+.-++|.+.+.+.+.+.+..
T Consensus 2 P~i~I~~~~grs~eqk~~l~~~it~~l~~~~~~ 34 (62)
T PRK00745 2 PTFHIELFEGRTVEQKRKLVEEITRVTVETLGC 34 (62)
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHcCC
Confidence 789999 56789999999999999988776543
No 91
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=29.04 E-value=1.2e+02 Score=28.91 Aligned_cols=56 Identities=21% Similarity=0.347 Sum_probs=32.4
Q ss_pred CCcEEEEeCCCCCch----HHHHHHHhhcCCC--cccceecCCCCCCCCCCCCCCchHHHHHHH
Q 012560 134 EGFHIVVDAGNGAGG----FFAAKVLEPLGAK--TSGSQFLEPDGMFPNHIPNPEDKTAMKAII 191 (461)
Q Consensus 134 ~~lkVvvd~~~G~~~----~~~~~ll~~lg~~--v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~ 191 (461)
.++.|++|+.|..+. ..++..--.+|++ ++ +.|.+|+-.. ...|+.-.++.++.+.
T Consensus 183 ~~lPVivd~SHs~G~r~~v~~~a~AAvA~GAdGl~I-E~H~~P~~A~-sD~~q~l~~~~l~~l~ 244 (250)
T PRK13397 183 TDLPIIVDVSHSTGRRDLLLPAAKIAKAVGANGIMM-EVHPDPDHAL-SDAAQQIDYKQLEQLG 244 (250)
T ss_pred hCCCeEECCCCCCcccchHHHHHHHHHHhCCCEEEE-EecCCccccc-CchhhhCCHHHHHHHH
Confidence 467999999998875 2344445578998 65 4455554432 1334444344344433
No 92
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=28.41 E-value=1.4e+02 Score=28.55 Aligned_cols=60 Identities=18% Similarity=0.262 Sum_probs=36.3
Q ss_pred CCcEEEEeCCCCCch----HHHHHHHhhcCCC--cccceecCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 012560 134 EGFHIVVDAGNGAGG----FFAAKVLEPLGAK--TSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVL 195 (461)
Q Consensus 134 ~~lkVvvd~~~G~~~----~~~~~ll~~lg~~--v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~ 195 (461)
.++.|++|+.|..+. ..++..--.+|++ ++ +.|.+||-..+. ++..-.++.|..+.+.++
T Consensus 193 ~~~pV~~ds~Hs~G~r~~~~~~~~aAva~Ga~gl~i-E~H~t~d~a~~D-~~~sl~p~~l~~lv~~i~ 258 (260)
T TIGR01361 193 THLPIIVDPSHAAGRRDLVIPLAKAAIAAGADGLMI-EVHPDPEKALSD-SKQQLTPEEFKRLVKELR 258 (260)
T ss_pred hCCCEEEcCCCCCCccchHHHHHHHHHHcCCCEEEE-EeCCCccccCCc-chhcCCHHHHHHHHHHHh
Confidence 367899999998772 3444455678998 55 466777766643 233333444555544443
No 93
>PLN02204 diacylglycerol kinase
Probab=28.11 E-value=3.4e+02 Score=29.35 Aligned_cols=83 Identities=13% Similarity=0.053 Sum_probs=49.6
Q ss_pred chHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchH-----HHHHHHhhcCCCcccceecCCCCCCCCCCCCCCch
Q 012560 110 YMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGF-----FAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDK 184 (461)
Q Consensus 110 ~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~-----~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~ 184 (461)
..+.+++++...+..+. .+.+++.|++.+..|-+.. -+..+|+..|+++.. +..... -
T Consensus 140 ~~~~w~~~l~~~l~~~~----~r~k~llVivNP~sGkg~~~~~~~~V~p~f~~a~i~~~v-~~T~~a------------g 202 (601)
T PLN02204 140 TCQSWVDRLNASLNKEV----GRPKNLLVFVHPLSGKGSGSRTWETVSPIFIRAKVKTKV-IVTERA------------G 202 (601)
T ss_pred HHHHHHHHHHHHHhhcc----CCCceEEEEECCCCCCcchHHHHHHHHHHHHHcCCeEEE-EEecCc------------c
Confidence 66678888888776433 2446788999998886543 255677888887531 111211 1
Q ss_pred HHHHHHHHHH--HhcCCcEEEeeCCCC
Q 012560 185 TAMKAIIQAV--LDNKADLGIIFDTDV 209 (461)
Q Consensus 185 ~~l~~l~~~v--~~~~adlgia~D~Dg 209 (461)
.+.+.+.++. ...++|..++.-|||
T Consensus 203 hA~d~~~~~~~~~l~~~D~VVaVGGDG 229 (601)
T PLN02204 203 HAFDVMASISNKELKSYDGVIAVGGDG 229 (601)
T ss_pred hHHHHHHHHhhhhccCCCEEEEEcCcc
Confidence 2222233222 245678888888877
No 94
>PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins. This is a family of putative P-loop ATPases [], as they contain an ATP-binding site and display ATPase and GTPase activities.; GO: 0005524 ATP binding
Probab=27.98 E-value=1.5e+02 Score=28.74 Aligned_cols=26 Identities=31% Similarity=0.405 Sum_probs=23.4
Q ss_pred EEEeCCCCCchHHHHHHHhhcCCCcc
Q 012560 138 IVVDAGNGAGGFFAAKVLEPLGAKTS 163 (461)
Q Consensus 138 Vvvd~~~G~~~~~~~~ll~~lg~~v~ 163 (461)
|++..+.|+|...+-.+|+.+|.-.+
T Consensus 4 vIiTGlSGaGKs~Al~~lED~Gy~cv 29 (284)
T PF03668_consen 4 VIITGLSGAGKSTALRALEDLGYYCV 29 (284)
T ss_pred EEEeCCCcCCHHHHHHHHHhcCeeEE
Confidence 67899999999999999999998654
No 95
>PF09413 DUF2007: Domain of unknown function (DUF2007); InterPro: IPR018551 This is a family of proteins with unknown function. ; PDB: 2HFV_A.
Probab=27.95 E-value=51 Score=23.96 Aligned_cols=27 Identities=7% Similarity=-0.049 Sum_probs=21.2
Q ss_pred cCCCceeEEEEeeCCHHHHHHHHHHHH
Q 012560 414 SLHDPVLPLNIEAPSREDAVKLGLAVA 440 (461)
Q Consensus 414 SgTeP~irvy~Ea~~~~~a~~l~~~~~ 440 (461)
.|+...++||+...+.++|+++++.+.
T Consensus 40 ~g~~~~~~v~V~~~d~~~A~~il~~~~ 66 (67)
T PF09413_consen 40 PGTGGQVEVYVPEEDYERAREILEEFE 66 (67)
T ss_dssp S--SSSEEEEEEGGGHHHHHHHHHHTT
T ss_pred cCccCceEEEECHHHHHHHHHHHHHhc
Confidence 455555999999999999999988764
No 96
>PRK14752 delta-hemolysin; Provisional
Probab=27.81 E-value=34 Score=22.03 Aligned_cols=29 Identities=7% Similarity=0.241 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHhhcCCCCCchHHHHHHhh
Q 012560 432 AVKLGLAVAAATKEFPALDTSALDKFVQA 460 (461)
Q Consensus 432 a~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 460 (461)
.-..+..+...|-+++++.+...|||+|.
T Consensus 16 visma~dii~tig~~vk~ii~tv~kft~k 44 (44)
T PRK14752 16 VISMAQDIISTIGDLVKWIIDTVNKFTKK 44 (44)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 34455667777778888999999999873
No 97
>PRK08622 galactose-6-phosphate isomerase subunit LacB; Reviewed
Probab=27.40 E-value=97 Score=27.63 Aligned_cols=22 Identities=27% Similarity=0.291 Sum_probs=20.1
Q ss_pred HHHHHHHHHHhCCCcEEEeCCC
Q 012560 2 LQDAVSRGITGAGLDVVQYGLA 23 (461)
Q Consensus 2 l~~a~~~gL~s~Gi~V~~~g~~ 23 (461)
||+.+.+-|.+.|++|.|+|..
T Consensus 14 lK~~l~~~L~~~G~eV~D~G~~ 35 (171)
T PRK08622 14 EKMAVSDYLKSKGHEVIDVGTY 35 (171)
T ss_pred HHHHHHHHHHHCCCEEEEcCCC
Confidence 7899999999999999999863
No 98
>PF02502 LacAB_rpiB: Ribose/Galactose Isomerase; InterPro: IPR003500 This entry represents the sugar isomerase enzymes ribose 5-phosphate isomerase B (rpiB), galactose isomerase subunit A (LacA) and galactose isomerase subunit B (LacB). Galactose-6-phosphate isomerase (5.3.1.26 from EC) is a heteromultimeric protein consisting of subunits LacA and LacB, and catalyses the conversion of D-galactose 6-phosphate to D-tagatose and 6-phosphate in the tagatose 6-phosphate pathway of lactose catabolism []. Galactose-6-phosphate isomerase is induced by galactose or lactose. This entry represents the LacB subunit. Ribose 5-phosphate isomerase (5.3.1.6 from EC) forms a homodimer and catalyses the interconversion of D-ribose 5-phosphate and D-ribulose 5-phosphate in the non-oxidative branch of the pentose phosphate pathway. This reaction permits the synthesis of ribose from other sugars, as well as the recycling of sugars from nucleotide breakdown. Two unrelated enzymes can catalyse this reaction: RpiA (found in most organisms) and RpiB (found in some bacteria and eukaryotes). RpiB is also involved in metabolism of the rare sugar, allose, in addition to ribose sugars. The structures of RpiA and RpiB are distinct, RpiB having a Rossmann-type alpha/beta/alpha sandwich topology [].; GO: 0005975 carbohydrate metabolic process; PDB: 3HEE_A 3HE8_A 3PH3_B 3PH4_B 3ONO_A 4EM8_B 3S5P_B 1O1X_A 2BES_D 2VVP_D ....
Probab=27.30 E-value=78 Score=27.26 Aligned_cols=49 Identities=20% Similarity=0.357 Sum_probs=32.1
Q ss_pred HHHHHHHHHHhCCCcEEEeCCCC-----chhhhhhhccccCcccCCCCeEEEEcCC
Q 012560 2 LQDAVSRGITGAGLDVVQYGLAS-----TPAMFNSTLTEGDAFFCPVDGAIMITAS 52 (461)
Q Consensus 2 l~~a~~~gL~s~Gi~V~~~g~~~-----tP~~~~a~~~~~~~~~~~a~gGI~ITaS 52 (461)
||+++.+-|.+.|.+|.|+|... -|.+.+.+... ...-.++-||.|-.+
T Consensus 13 lK~~i~~~L~~~g~eV~D~G~~~~~~~dy~~~a~~va~~--V~~~~~d~GIliCgt 66 (140)
T PF02502_consen 13 LKEAIKEYLEEKGYEVIDFGTYSEDSVDYPDFAEKVAEA--VASGEADRGILICGT 66 (140)
T ss_dssp HHHHHHHHHHHTTEEEEEESESSTST--HHHHHHHHHHH--HHTTSSSEEEEEESS
T ss_pred HHHHHHHHHHHCCCEEEEeCCCCCCCCCHHHHHHHHHHH--HHcccCCeEEEEcCC
Confidence 78999999999999999998666 34444433211 011235667777654
No 99
>PRK12615 galactose-6-phosphate isomerase subunit LacB; Reviewed
Probab=26.83 E-value=1e+02 Score=27.56 Aligned_cols=21 Identities=33% Similarity=0.392 Sum_probs=19.7
Q ss_pred HHHHHHHHHHhCCCcEEEeCC
Q 012560 2 LQDAVSRGITGAGLDVVQYGL 22 (461)
Q Consensus 2 l~~a~~~gL~s~Gi~V~~~g~ 22 (461)
||+.+..-|.+.|++|.|+|.
T Consensus 14 lK~~l~~~L~~~G~eV~D~G~ 34 (171)
T PRK12615 14 EKMAVSDFLKSKGYDVIDCGT 34 (171)
T ss_pred HHHHHHHHHHHCCCEEEEcCC
Confidence 789999999999999999986
No 100
>TIGR02133 RPI_actino ribose 5-phosphate isomerase. This family is a member of the RpiB/LacA/LacB subfamily (TIGR00689) but lies outside the RpiB equivalog (TIGR01120) which is also a member of that subfamily. Ribose 5-phosphate isomerase is an essential enzyme of the pentose phosphate pathway; a pathway that appears to be present in the actinobacteria. The only candidates for ribose 5-phosphate isomerase in the Actinobacteria are members of this family.
Probab=26.60 E-value=1e+02 Score=26.86 Aligned_cols=21 Identities=14% Similarity=0.276 Sum_probs=19.6
Q ss_pred HHHHHHHHHHhCCCcEEEeCC
Q 012560 2 LQDAVSRGITGAGLDVVQYGL 22 (461)
Q Consensus 2 l~~a~~~gL~s~Gi~V~~~g~ 22 (461)
||+.+..-|.+.|++|.|+|.
T Consensus 14 lK~~l~~~L~~~g~eV~D~G~ 34 (148)
T TIGR02133 14 YKEALWLDLAAHEPEVCDVGV 34 (148)
T ss_pred HHHHHHHHHHHCCCEEEECCC
Confidence 789999999999999999985
No 101
>PRK08452 flagellar protein FlaG; Provisional
Probab=25.54 E-value=2.8e+02 Score=23.30 Aligned_cols=50 Identities=10% Similarity=0.223 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHhcCCcEEEeeCCCCceeEE--EcC-CC---ccccchhHHHHHHHH
Q 012560 185 TAMKAIIQAVLDNKADLGIIFDTDVDRSAA--VDS-TG---HELNRNRLIALMSAI 234 (461)
Q Consensus 185 ~~l~~l~~~v~~~~adlgia~D~DgDR~~~--vd~-~G---~~l~~d~~~~L~~~~ 234 (461)
++.+.+-+.+...+-+|=|.+|.+.+|+.+ +|. +| |-+.+++++-|+...
T Consensus 57 ~~ve~lN~~~~~~~~~L~F~~de~~~~~vVkVvD~~T~eVIRqIP~Ee~L~l~~~m 112 (124)
T PRK08452 57 ELTEKLNEEMKRLDTNIRFGYNDKIKGLVVSVKEANGGKVIREIPSKEAIELMEYM 112 (124)
T ss_pred HHHHHHHHHHHhhCCceEEEEcCCCCcEEEEEEECCCCceeeeCCCHHHHHHHHHH
Confidence 445556666677888999999999999877 464 45 678889888887774
No 102
>PF14492 EFG_II: Elongation Factor G, domain II; PDB: 1WDT_A 2DY1_A 2XEX_A 1ELO_A 2XSY_Y 2WRK_Y 1DAR_A 2WRI_Y 2XUY_Y 3J0E_H ....
Probab=25.06 E-value=1.3e+02 Score=22.57 Aligned_cols=33 Identities=39% Similarity=0.559 Sum_probs=27.2
Q ss_pred CceeEEEEeeCCHHHHHHHHHHHHHHhhcCCCC
Q 012560 417 DPVLPLNIEAPSREDAVKLGLAVAAATKEFPAL 449 (461)
Q Consensus 417 eP~irvy~Ea~~~~~a~~l~~~~~~~v~~~~~~ 449 (461)
+|++++-+|+.++....++...+..+.++--.+
T Consensus 3 ~Pv~~~~i~p~~~~d~~kl~~aL~~l~~eDP~l 35 (75)
T PF14492_consen 3 PPVLSVAIEPKNKEDEPKLSEALQKLSEEDPSL 35 (75)
T ss_dssp S-SEEEEEEESSHHHHHHHHHHHHHHHHH-TTS
T ss_pred CCeEEEEEEECCHhHHHHHHHHHHHHHhcCCeE
Confidence 799999999999999999999999888875443
No 103
>COG0113 HemB Delta-aminolevulinic acid dehydratase [Coenzyme metabolism]
Probab=24.86 E-value=6e+02 Score=25.00 Aligned_cols=108 Identities=16% Similarity=0.278 Sum_probs=61.9
Q ss_pred cEEEEeCCCCCchHHHHHHH------hhcCCCcccceecCCCCC----CCCCCCCCCchHHHHHHHHHHHhcCCcEEEee
Q 012560 136 FHIVVDAGNGAGGFFAAKVL------EPLGAKTSGSQFLEPDGM----FPNHIPNPEDKTAMKAIIQAVLDNKADLGIIF 205 (461)
Q Consensus 136 lkVvvd~~~G~~~~~~~~ll------~~lg~~v~~~~~~~~d~~----f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~ 205 (461)
.+--+++|-|+-+.-+..+. ..||+..+ .++-.|++. .+...-+|+. -.+...+.+++.--+++++.
T Consensus 45 ~~~~I~SMPgv~r~s~d~l~~~~~~~~~lGi~av-~LFgvp~~~~Kd~~gs~A~~~~g--ivqravr~ik~~~p~l~iit 121 (330)
T COG0113 45 IKEEIPSMPGVYRYSLDRLVEEAEELVDLGIPAV-ILFGVPDDSKKDETGSEAYDPDG--IVQRAVRAIKEAFPELVVIT 121 (330)
T ss_pred CccccCCCCCceeccHHHHHHHHHHHHhcCCCEE-EEeCCCcccccCcccccccCCCC--hHHHHHHHHHHhCCCeEEEe
Confidence 34556777777666555554 34677665 344444332 1222334432 24455556665444899988
Q ss_pred CC------CCceeEEEcCCCccccchhHHHHHHHHHHHhCC-CCeEEEe
Q 012560 206 DT------DVDRSAAVDSTGHELNRNRLIALMSAIVLEEHP-GTTIVTD 247 (461)
Q Consensus 206 D~------DgDR~~~vd~~G~~l~~d~~~~L~~~~~l~~~~-~~~vv~~ 247 (461)
|- |=-.++++++.| .+..|+.+-+++...+.+.. |.-+|++
T Consensus 122 DvcLceyT~HGHcGil~~~~-~V~ND~Tle~l~k~Avs~AeAGAdivAP 169 (330)
T COG0113 122 DVCLCEYTDHGHCGILDDGG-YVDNDETLEILAKQAVSQAEAGADIVAP 169 (330)
T ss_pred eecccCCcCCCccccccCCC-eecchHHHHHHHHHHHHHHHcCCCeecc
Confidence 73 223456666555 67788888888887665543 4557654
No 104
>PRK02220 4-oxalocrotonate tautomerase; Provisional
Probab=24.59 E-value=1.1e+02 Score=21.55 Aligned_cols=32 Identities=22% Similarity=0.258 Sum_probs=27.0
Q ss_pred ceeEEEE-eeCCHHHHHHHHHHHHHHhhcCCCC
Q 012560 418 PVLPLNI-EAPSREDAVKLGLAVAAATKEFPAL 449 (461)
Q Consensus 418 P~irvy~-Ea~~~~~a~~l~~~~~~~v~~~~~~ 449 (461)
|.++|.+ ++.|.+.-++|.+.+.+.+.+.+..
T Consensus 2 P~i~i~~~~Grs~eqk~~l~~~it~~l~~~~~~ 34 (61)
T PRK02220 2 PYVHIKLIEGRTEEQLKALVKDVTAAVSKNTGA 34 (61)
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCc
Confidence 7888984 7789999999999999988876654
No 105
>PRK05198 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=24.35 E-value=2.4e+02 Score=27.04 Aligned_cols=61 Identities=16% Similarity=0.185 Sum_probs=32.8
Q ss_pred CCcEEEEeCCCC-----------Cc-hHHHHHHHhh---cCCCcccceecCCCCCCCC-CCCCCCchHHHHHHHHHHH
Q 012560 134 EGFHIVVDAGNG-----------AG-GFFAAKVLEP---LGAKTSGSQFLEPDGMFPN-HIPNPEDKTAMKAIIQAVL 195 (461)
Q Consensus 134 ~~lkVvvd~~~G-----------~~-~~~~~~ll~~---lg~~v~~~~~~~~d~~f~~-~~p~P~~~~~l~~l~~~v~ 195 (461)
..+.|++|+.|+ +| +.+++.+.+. .|++=+ .+..+|||.-.- ..|+.-.++.++.+.+.++
T Consensus 182 ~~lPVi~DpSHsvq~pg~~~~~s~G~r~~v~~la~AAvA~GadGl-~iEvHpdP~~AlsDg~q~l~~~~~~~ll~~l~ 258 (264)
T PRK05198 182 TGAPVIFDATHSVQLPGGQGGSSGGQREFVPVLARAAVAVGVAGL-FIETHPDPDNALSDGPNMLPLDKLEPLLEQLK 258 (264)
T ss_pred CCCCEEEeCCccccCCCCCCCCCCCcHHHHHHHHHHHHHcCCCEE-EEEeCCCccccCCCccccCCHHHHHHHHHHHH
Confidence 348999999996 33 3355555433 466643 233455554432 2344444555555554444
No 106
>PRK12457 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=24.28 E-value=2.5e+02 Score=27.12 Aligned_cols=60 Identities=12% Similarity=0.129 Sum_probs=32.4
Q ss_pred CCcEEEEeCCCC-----------Cc-hHHHHHHHhh---cCCCcccceecCCCCCCCC-CCCCCCchHHHHHHHHHH
Q 012560 134 EGFHIVVDAGNG-----------AG-GFFAAKVLEP---LGAKTSGSQFLEPDGMFPN-HIPNPEDKTAMKAIIQAV 194 (461)
Q Consensus 134 ~~lkVvvd~~~G-----------~~-~~~~~~ll~~---lg~~v~~~~~~~~d~~f~~-~~p~P~~~~~l~~l~~~v 194 (461)
.++.|++|+.|+ +| +.+++.+.+. .|++-+ .+..+|||.-.- ..|+--..+.++.+.+.+
T Consensus 190 t~lPVi~DpSHsvq~p~~~g~~s~G~re~v~~larAAvA~GaDGl-~iEvHpdP~~AlsDg~q~l~~~~~~~l~~~l 265 (281)
T PRK12457 190 GDLPVIFDVTHSLQCRDPLGAASGGRRRQVLDLARAGMAVGLAGL-FLEAHPDPDRARCDGPSALPLDQLEPFLSQV 265 (281)
T ss_pred CCCCEEEeCCccccCCCCCCCCCCCCHHHHHHHHHHHHHhCCCEE-EEEecCCccccCCCcccccCHHHHHHHHHHH
Confidence 478999999996 32 3355555543 566643 233455554432 334444444455544443
No 107
>COG4019 Uncharacterized protein conserved in archaea [Function unknown]
Probab=24.19 E-value=4.4e+02 Score=22.22 Aligned_cols=82 Identities=23% Similarity=0.196 Sum_probs=53.0
Q ss_pred EEEEeCCCCCchHHHHHHHhhcCCCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEe-----eCCCCce
Q 012560 137 HIVVDAGNGAGGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGII-----FDTDVDR 211 (461)
Q Consensus 137 kVvvd~~~G~~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia-----~D~DgDR 211 (461)
|+||-..|----..+..++++++..-.. ..+-|..|..-.|-|- +-...-.+.-.+||+.|+ .-|.|.=
T Consensus 38 r~vV~t~N~~K~~aindvlrrf~l~Eae--ml~~~T~~ADlTrmPA----~tKalmaldis~ADlvIARGRLGvPGSGsm 111 (156)
T COG4019 38 RIVVATNNQKKFKAINDVLRRFCLAEAE--MLDIDTRFADLTRMPA----LTKALMALDISKADLVIARGRLGVPGSGSM 111 (156)
T ss_pred eEEEecCCHHHHHHHHHHHHHhccchHH--HhcCccchhhcccChH----HHHHHHhccccCCcEEEeeccccCCCCCcE
Confidence 6788777766666788899998864321 2344556654444442 222233456678999887 3466777
Q ss_pred eEEEcCCCccccc
Q 012560 212 SAAVDSTGHELNR 224 (461)
Q Consensus 212 ~~~vd~~G~~l~~ 224 (461)
+.+.|+.|++++.
T Consensus 112 lVimD~rgRlLtA 124 (156)
T COG4019 112 LVIMDERGRLLTA 124 (156)
T ss_pred EEEEccccceeee
Confidence 7777999988754
No 108
>PF06029 AlkA_N: AlkA N-terminal domain; InterPro: IPR010316 This domain is found at the N terminus of bacterial AlkA 3.2.2.21 from EC. AlkA (3-methyladenine-DNA glycosylase II) is a base excision repair glycosylase from Escherichia coli. It removes a variety of alkylated bases from DNA, primarily by removing alkylation damage from duplex and single stranded DNA. AlkA flips a 1-azaribose abasic nucleotide out of DNA. This produces a 66 degrees bend in the DNA and a marked widening of the minor groove []. This groove is a large hydrophobic cleft, which is unusually rich in aromatic residues. AlkA recognises electron-deficient methylated bases through pi-donor/acceptor interactions involving the electron-rich aromatic cleft. AlkA is similar in fold and active site location to the bifunctional glycosylase/lyase endonuclease III. This suggests that the two may use similar mechanisms for base excision []. The structural analysis of the AlkA and AlkA-hypoxanthine structures indicate that free hypoxanthine binding in the active site may inhibit glycosylase activity [].; GO: 0003905 alkylbase DNA N-glycosylase activity; PDB: 1MPG_B 3CWS_D 3CW7_C 3CWA_B 3D4V_A 3CWT_C 3CWU_B 3OGD_A 3CVS_C 1PVS_A ....
Probab=24.13 E-value=1.1e+02 Score=25.25 Aligned_cols=41 Identities=20% Similarity=0.281 Sum_probs=30.2
Q ss_pred CeEEEEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcCCCCC
Q 012560 406 GGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFPALD 450 (461)
Q Consensus 406 ~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v~~~~~~~ 450 (461)
.||+-+++...+..++|.++..+...+.++. ..|+.++.||
T Consensus 45 ~g~v~v~~~~~~~~l~v~~~~~~~~~l~~~~----~rvRrlfDLd 85 (116)
T PF06029_consen 45 PGWVSVRHDPEKNHLRVTLSLSDLRDLPAVI----ARVRRLFDLD 85 (116)
T ss_dssp EEEEEEEEETTTTEEEEEE-GGGGGGHHHHH----HHHHHHTTTT
T ss_pred EEEEEEEEcCCCCEEEEEEEcccHHHHHHHH----HHHHHHhCCC
Confidence 4899999999999999999997766666554 4455555444
No 109
>PLN02958 diacylglycerol kinase/D-erythro-sphingosine kinase
Probab=24.04 E-value=3.7e+02 Score=28.28 Aligned_cols=50 Identities=10% Similarity=0.112 Sum_probs=32.8
Q ss_pred cchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCch--HH----HHHHHhhcCCCcc
Q 012560 109 DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGG--FF----AAKVLEPLGAKTS 163 (461)
Q Consensus 109 ~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~--~~----~~~ll~~lg~~v~ 163 (461)
+....+++.+.+.++.. .+.+++.|++.|..|-+. .+ +..+|+..|+++.
T Consensus 92 ~~~~~w~~~~~~~~~~~-----~~~kr~lvIvNP~SGkg~a~k~~~~~v~~~L~~~gi~~~ 147 (481)
T PLN02958 92 ESRRLWCQKLRDYLDSL-----GRPKRLLVFVNPFGGKKSASKIFFDVVKPLLEDADIQLT 147 (481)
T ss_pred HHHHHHHHHHHHHHhhc-----cCCcEEEEEEcCCCCCcchhHHHHHHHHHHHHHcCCeEE
Confidence 46677888888877532 133467789998877544 33 4457788887653
No 110
>cd06395 PB1_Map2k5 PB1 domain is essential part of the mitogen-activated protein kinase kinase 5 (Map2k5, alias MEK5) one of the key member of the signaling kinases cascade which involved in angiogenesis and early cardiovascular development. The PB1 domain of Map2k5 interacts with the PB1 domain of another members of kinase cascade MEKK2 (or MEKK3). A canonical PB1-PB1 interaction, involving heterodimerization of two PB1 domain, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. The Map2k5 protein contains a type I PB1 domain.
Probab=23.91 E-value=88 Score=24.02 Aligned_cols=44 Identities=18% Similarity=0.127 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHH
Q 012560 185 TAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIV 235 (461)
Q Consensus 185 ~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~~ 235 (461)
..|+.+.+...+.-...-=.=|.||||+.+-. ++++-|++.+|+
T Consensus 27 DvL~~I~~vlp~aT~tAFeYEDE~gDRITVRS-------DeEm~AMlsyy~ 70 (91)
T cd06395 27 DVLDVIGQVLPEATTTAFEYEDEDGDRITVRS-------DEEMKAMLSYYC 70 (91)
T ss_pred HHHHHHHHhcccccccceeeccccCCeeEecc-------hHHHHHHHHHHH
Confidence 33444444444333333344589999998753 567778877765
No 111
>smart00135 LY Low-density lipoprotein-receptor YWTD domain. Type "B" repeats in low-density lipoprotein (LDL) receptor that plays a central role in mammalian cholesterol metabolism. Also present in a variety of molecules similar to gp300/megalin.
Probab=23.86 E-value=63 Score=20.42 Aligned_cols=18 Identities=22% Similarity=-0.027 Sum_probs=15.3
Q ss_pred EEEeeCCCCceeEEEcCC
Q 012560 201 LGIIFDTDVDRSAAVDST 218 (461)
Q Consensus 201 lgia~D~DgDR~~~vd~~ 218 (461)
-|+++|++++|+...|-.
T Consensus 12 ~~la~d~~~~~lYw~D~~ 29 (43)
T smart00135 12 NGLAVDWIEGRLYWTDWG 29 (43)
T ss_pred CEEEEeecCCEEEEEeCC
Confidence 379999999999998854
No 112
>TIGR01006 polys_exp_MPA1 polysaccharide export protein, MPA1 family, Gram-positive type. This family contains members from Low GC Gram-positive bacteria; they are proposed to have a function in the export of complex polysaccharides.
Probab=23.38 E-value=1.6e+02 Score=27.21 Aligned_cols=37 Identities=8% Similarity=0.201 Sum_probs=30.1
Q ss_pred EEEEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHhh
Q 012560 408 WFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATK 444 (461)
Q Consensus 408 w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v~ 444 (461)
-+-+.+.+...+++|.+++.|+++|.++++.+.+...
T Consensus 109 ~i~v~~~~~t~ii~Isv~~~dp~~A~~ian~~~~~~~ 145 (226)
T TIGR01006 109 MVTVTNPTDTRLISISVKDKTPQDASKIANSLREVAS 145 (226)
T ss_pred ceEEeCCCCcEEEEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 3556677778999999999999999999888776443
No 113
>PRK07738 flagellar protein FlaG; Provisional
Probab=23.07 E-value=3.4e+02 Score=22.59 Aligned_cols=50 Identities=14% Similarity=0.295 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHhcCCcEEEeeCCCCceeEE--EcC-CC---ccccchhHHHHHHHH
Q 012560 185 TAMKAIIQAVLDNKADLGIIFDTDVDRSAA--VDS-TG---HELNRNRLIALMSAI 234 (461)
Q Consensus 185 ~~l~~l~~~v~~~~adlgia~D~DgDR~~~--vd~-~G---~~l~~d~~~~L~~~~ 234 (461)
.+++.+-+.+...+-+|=|.+|.+.+|+.+ +|. +| +-+.+++++-|+...
T Consensus 50 ~aveklN~~l~~~~~~L~F~vdeet~~~vVkVvD~~T~EVIRQIPpEe~L~l~~~m 105 (117)
T PRK07738 50 EVVDGMNELLEPSQTSLKFELHEKLNEYYVQVVDERTNEVIREIPPKKLLDMYAAM 105 (117)
T ss_pred HHHHHHHHHHHhcCCceEEEEecCCCcEEEEEEECCCCeeeeeCCCHHHHHHHHHH
Confidence 455666667777888999999999999987 564 56 677889988887765
No 114
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=22.82 E-value=4e+02 Score=23.35 Aligned_cols=29 Identities=17% Similarity=0.237 Sum_probs=24.6
Q ss_pred CCCceeEEEcCCCccccchhHHHHHHHHH
Q 012560 207 TDVDRSAAVDSTGHELNRNRLIALMSAIV 235 (461)
Q Consensus 207 ~DgDR~~~vd~~G~~l~~d~~~~L~~~~~ 235 (461)
+++|.+.+.|++|+.++-.++..++-.+.
T Consensus 65 ~~~~~~i~LDe~Gk~~sS~~fA~~l~~~~ 93 (157)
T PRK00103 65 PKGARVIALDERGKQLSSEEFAQELERWR 93 (157)
T ss_pred CCCCEEEEEcCCCCcCCHHHHHHHHHHHH
Confidence 35678888999999999999999888763
No 115
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=22.78 E-value=3.1e+02 Score=24.57 Aligned_cols=71 Identities=21% Similarity=0.250 Sum_probs=38.9
Q ss_pred EEEEeCCCCC-----ch--------------HHHHHHHhhcCCCcccceecCCCCCCCC---CCCCCCchHHHHHHHHHH
Q 012560 137 HIVVDAGNGA-----GG--------------FFAAKVLEPLGAKTSGSQFLEPDGMFPN---HIPNPEDKTAMKAIIQAV 194 (461)
Q Consensus 137 kVvvd~~~G~-----~~--------------~~~~~ll~~lg~~v~~~~~~~~d~~f~~---~~p~P~~~~~l~~l~~~v 194 (461)
.|++|++||- .+ ..+...|++.|++|.. . ...|..... .....+....|.+-.+.+
T Consensus 2 ~I~iDpGHGg~d~GA~~~~g~~E~~~~l~ia~~l~~~L~~~G~~V~l-t-r~~d~~~~~~~~~~~~~~~~~~L~~R~~~A 79 (189)
T TIGR02883 2 IIVIDPGHGGIDGGAVGKDGTLEKDITLEIALKLKDYLQEQGALVVM-T-REDDSDLASEGTKGYSRRKIEDLRKRVKLI 79 (189)
T ss_pred EEEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEE-E-ecCCcCccccccccccccccCCHHHHHHHH
Confidence 5788888872 11 1345667888988752 1 122222100 000001112245555677
Q ss_pred HhcCCcEEEeeCCCC
Q 012560 195 LDNKADLGIIFDTDV 209 (461)
Q Consensus 195 ~~~~adlgia~D~Dg 209 (461)
.+.++|+-|.+=.|+
T Consensus 80 n~~~adlfiSiH~Na 94 (189)
T TIGR02883 80 NESEADLFISIHLNA 94 (189)
T ss_pred HhcCCCEEEEEecCC
Confidence 788999999887776
No 116
>PRK02289 4-oxalocrotonate tautomerase; Provisional
Probab=22.77 E-value=1.2e+02 Score=21.46 Aligned_cols=31 Identities=19% Similarity=0.352 Sum_probs=25.9
Q ss_pred ceeEEEE-eeCCHHHHHHHHHHHHHHhhcCCC
Q 012560 418 PVLPLNI-EAPSREDAVKLGLAVAAATKEFPA 448 (461)
Q Consensus 418 P~irvy~-Ea~~~~~a~~l~~~~~~~v~~~~~ 448 (461)
|.++|+. ++.|.|.-++|.+.+.+.+.+.+.
T Consensus 2 P~i~i~~~~Grs~EqK~~L~~~it~a~~~~~~ 33 (60)
T PRK02289 2 PFVRIDLFEGRSQEQKNALAREVTEVVSRIAK 33 (60)
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHHHHhC
Confidence 7889987 778999999999998888876543
No 117
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=22.63 E-value=88 Score=26.53 Aligned_cols=25 Identities=24% Similarity=0.300 Sum_probs=19.9
Q ss_pred HHHHHHHHHhCCCcEEEeCCCCchh
Q 012560 3 QDAVSRGITGAGLDVVQYGLASTPA 27 (461)
Q Consensus 3 ~~a~~~gL~s~Gi~V~~~g~~~tP~ 27 (461)
|+-++..|.++|++|+++|.-.+|.
T Consensus 19 ~~iv~~~l~~~GfeVi~lg~~~s~e 43 (132)
T TIGR00640 19 AKVIATAYADLGFDVDVGPLFQTPE 43 (132)
T ss_pred HHHHHHHHHhCCcEEEECCCCCCHH
Confidence 4567778999999999998665555
No 118
>TIGR01362 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase. In Gram-negative bacteria, this is the first step in the biosynthesis of 3-deoxy-D-manno-octulosonate, part of the oligosaccharide core of lipopolysaccharide.
Probab=22.57 E-value=2.7e+02 Score=26.56 Aligned_cols=60 Identities=18% Similarity=0.286 Sum_probs=32.6
Q ss_pred CcEEEEeCCCC-----------Cc-hHHHHHHHh---hcCCCcccceecCCCCCCCC-CCCCCCchHHHHHHHHHHH
Q 012560 135 GFHIVVDAGNG-----------AG-GFFAAKVLE---PLGAKTSGSQFLEPDGMFPN-HIPNPEDKTAMKAIIQAVL 195 (461)
Q Consensus 135 ~lkVvvd~~~G-----------~~-~~~~~~ll~---~lg~~v~~~~~~~~d~~f~~-~~p~P~~~~~l~~l~~~v~ 195 (461)
++.|++|+.|+ +| +.+++.+.+ ..|++=+ .+..+|||.-.- ..|+.-.++.++.+.+.++
T Consensus 175 ~~PVi~DpSHsvq~pg~~g~~s~G~r~~v~~la~AAvA~GaDGl-~iEvHpdP~~AlsDg~q~l~~~~~~~ll~~l~ 250 (258)
T TIGR01362 175 GCPVIFDATHSVQQPGGLGGASGGLREFVPTLARAAVAVGIDGL-FMETHPDPKNAKSDGPNMLPLSELEGLLEKLL 250 (258)
T ss_pred CCCEEEeCCccccCCCCCCCCCCCcHHHHHHHHHHHHHhCCCEE-EEEeCCCccccCCCccccCCHHHHHHHHHHHH
Confidence 68999999996 33 335555554 3566643 233455554432 3344444455555544443
No 119
>COG0124 HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=22.45 E-value=20 Score=37.02 Aligned_cols=23 Identities=30% Similarity=0.304 Sum_probs=20.0
Q ss_pred cCeEEEEEecCCCceeEEEEeeC
Q 012560 405 SGGWFLLRLSLHDPVLPLNIEAP 427 (461)
Q Consensus 405 ~~~w~liRpSgTeP~irvy~Ea~ 427 (461)
.|.|+.+||.+|-|++|.|+|-.
T Consensus 73 ggr~laLRpe~Tapv~R~~~en~ 95 (429)
T COG0124 73 GGRSLALRPELTAPVARAVAENK 95 (429)
T ss_pred CCCEEEecccCcHHHHHHHHhcc
Confidence 35699999999999999998764
No 120
>PLN03033 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=21.64 E-value=2.5e+02 Score=27.20 Aligned_cols=60 Identities=10% Similarity=0.135 Sum_probs=32.6
Q ss_pred CCcEEEEeCCCC----------------Cc-hHHHHHHHhh---cCCCcccceecCCCCCCCC-CCCCCCchHHHHHHHH
Q 012560 134 EGFHIVVDAGNG----------------AG-GFFAAKVLEP---LGAKTSGSQFLEPDGMFPN-HIPNPEDKTAMKAIIQ 192 (461)
Q Consensus 134 ~~lkVvvd~~~G----------------~~-~~~~~~ll~~---lg~~v~~~~~~~~d~~f~~-~~p~P~~~~~l~~l~~ 192 (461)
.++.|++|+.|+ +| +.+++.+.+. .|++=+ .+..+|||.-.- ..|+.-.++.++.+.+
T Consensus 188 ~~lPVI~DpSHsvQ~pg~~~~~~~g~~s~G~Re~V~~larAAvA~GaDGl-fiEvHpdP~~AlsDg~q~l~~~~l~~ll~ 266 (290)
T PLN03033 188 ANCPVVADITHSLQQPAGKKLDGGGVASGGLRELIPCIARTAVAVGVDGI-FMEVHDDPLSAPVDGPTQWPLRHLEELLE 266 (290)
T ss_pred cCCCEEEeCCccccCCCcccccccCCCCCCCHHHHHHHHHHHHHhCCCEE-EEEecCCccccCCCcccCcCHHHHHHHHH
Confidence 578999999996 22 3366665543 576643 233555554432 2344444444554443
Q ss_pred HH
Q 012560 193 AV 194 (461)
Q Consensus 193 ~v 194 (461)
.+
T Consensus 267 ~l 268 (290)
T PLN03033 267 EL 268 (290)
T ss_pred HH
Confidence 33
No 121
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=21.29 E-value=5.8e+02 Score=25.97 Aligned_cols=104 Identities=23% Similarity=0.191 Sum_probs=57.8
Q ss_pred EEEEeCCCCCchHHHHHHHhhcCCCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEE-
Q 012560 137 HIVVDAGNGAGGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAV- 215 (461)
Q Consensus 137 kVvvd~~~G~~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~v- 215 (461)
||+ -..||.-+.-+.++++.+|.++. .+.+.+. ..++|+ ++.+.++ -|+|.+-++++
T Consensus 82 kVL-v~~nG~FG~R~~~ia~~~g~~v~-~~~~~wg-----~~v~p~------~v~~~L~---------~~~~~~~V~~vH 139 (383)
T COG0075 82 KVL-VVVNGKFGERFAEIAERYGAEVV-VLEVEWG-----EAVDPE------EVEEALD---------KDPDIKAVAVVH 139 (383)
T ss_pred eEE-EEeCChHHHHHHHHHHHhCCceE-EEeCCCC-----CCCCHH------HHHHHHh---------cCCCccEEEEEe
Confidence 444 45789999999999999999987 3444432 223332 3334443 23555555555
Q ss_pred --cCCCccccchhHHHHHHHHHHHhCCCCeEEEeccCChhHHHHHHHHcCCeEEE
Q 012560 216 --DSTGHELNRNRLIALMSAIVLEEHPGTTIVTDSVTSDGLTTFIEKKLGGKHHR 268 (461)
Q Consensus 216 --d~~G~~l~~d~~~~L~~~~~l~~~~~~~vv~~~~ss~~~~~~ia~~~g~~v~~ 268 (461)
+.+|..-+-.++..+.-.+ +..+|++-+||-.-.+.=..++|+.+.-
T Consensus 140 ~ETSTGvlnpl~~I~~~~k~~------g~l~iVDaVsS~Gg~~~~vd~wgiDv~i 188 (383)
T COG0075 140 NETSTGVLNPLKEIAKAAKEH------GALLIVDAVSSLGGEPLKVDEWGIDVAI 188 (383)
T ss_pred ccCcccccCcHHHHHHHHHHc------CCEEEEEecccCCCcccchhhcCccEEE
Confidence 3356433323344433222 5566678888844433333445665544
No 122
>KOG3852 consensus Uncharacterized conserved protein [Function unknown]
Probab=21.20 E-value=4.8e+02 Score=25.58 Aligned_cols=93 Identities=17% Similarity=0.218 Sum_probs=44.7
Q ss_pred HHHHHHhCCCcEEEeCCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHHHHHhH
Q 012560 6 VSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILERAADI 85 (461)
Q Consensus 6 ~~~gL~s~Gi~V~~~g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie~~~~~ 85 (461)
+-+-|.+.|+.|.|.. +...++=+|-+|||.-.|-.+.++-.--.+...+..-.....+.-
T Consensus 87 vr~~l~~~gi~v~dvR-------------------LnGsaAs~vl~~d~gl~ykDLDlIF~v~l~~e~eFq~vkd~Vl~c 147 (426)
T KOG3852|consen 87 VRSRLEEQGIEVRDVR-------------------LNGSAASHVLHSDNGLSYKDLDLIFPVDLPGEAEFQLVKDVVLDC 147 (426)
T ss_pred HHHHHHhcCeeEEEEe-------------------ecCcccceeeecCCCcCccccceEEeecCCCchhhHHHHHHHHHH
Confidence 3445666777777642 222344566677776666555444322222222222222211111
Q ss_pred HhhhhhcccccccccCCCcEEEEcchHHHHHHHHHHHH
Q 012560 86 YKQFMVEGLTNLEKQTSTSIKRVDYMSVYTSDLVKAVR 123 (461)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~Y~~~l~~~i~ 123 (461)
.-.|-.+. .....+....+.++|++.+.+...
T Consensus 148 lldflP~~------v~keKisp~tlKdaYvqKlvKVct 179 (426)
T KOG3852|consen 148 LLDFLPEG------VNKEKISPLTLKDAYVQKLVKVCT 179 (426)
T ss_pred HHHhCccc------ccccccChhHHHHHHHHHHHHhcc
Confidence 11222221 123344455688999999988763
No 123
>COG1660 Predicted P-loop-containing kinase [General function prediction only]
Probab=20.72 E-value=2.3e+02 Score=27.24 Aligned_cols=25 Identities=40% Similarity=0.513 Sum_probs=22.5
Q ss_pred EEEeCCCCCchHHHHHHHhhcCCCc
Q 012560 138 IVVDAGNGAGGFFAAKVLEPLGAKT 162 (461)
Q Consensus 138 Vvvd~~~G~~~~~~~~ll~~lg~~v 162 (461)
|+|+.+.|+|..++-+.|+.+|.-.
T Consensus 4 vIVTGlSGAGKsvAl~~lEDlGyyc 28 (286)
T COG1660 4 VIVTGLSGAGKSVALRVLEDLGYYC 28 (286)
T ss_pred EEEecCCCCcHHHHHHHHHhcCeee
Confidence 7789999999999999999999643
No 124
>PF03646 FlaG: FlaG protein; InterPro: IPR005186 Although these proteins are known to be important for flagellar their exact function is unknown.; PDB: 2HC5_A.
Probab=20.70 E-value=2.2e+02 Score=22.89 Aligned_cols=51 Identities=18% Similarity=0.331 Sum_probs=35.5
Q ss_pred hHHHHHHHHHHHhcCCcEEEeeCCCCceeEE--EcC-CC---ccccchhHHHHHHHH
Q 012560 184 KTAMKAIIQAVLDNKADLGIIFDTDVDRSAA--VDS-TG---HELNRNRLIALMSAI 234 (461)
Q Consensus 184 ~~~l~~l~~~v~~~~adlgia~D~DgDR~~~--vd~-~G---~~l~~d~~~~L~~~~ 234 (461)
..+++.+-+.+...+..|-|.+|.|.+|+.+ +|. +| +-|.+++++-|...+
T Consensus 40 ~~~v~~ln~~~~~~~~~l~F~vde~~~~~vVkViD~~T~eVIRqIP~Ee~l~l~~~l 96 (107)
T PF03646_consen 40 EEAVEKLNEFLQALNTSLRFSVDEESGRVVVKVIDKETGEVIRQIPPEELLDLAKRL 96 (107)
T ss_dssp HHHHHHHHHHHTTSS--EEEEEEEETTEEEEEEEETTT-SEEEEE-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCceEEEEecCCCcEEEEEEECCCCcEEEeCCcHHHHHHHHHH
Confidence 3455666667777888999999999999877 564 57 567888888887654
Done!