Query 012560
Match_columns 461
No_of_seqs 152 out of 1468
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 11:49:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012560.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012560hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uw2_A Phosphoglucomutase/phos 100.0 3E-81 1E-85 647.2 38.9 398 1-447 77-478 (485)
2 2f7l_A 455AA long hypothetical 100.0 4.9E-81 1.7E-85 644.8 38.8 398 1-445 52-454 (455)
3 1wqa_A Phospho-sugar mutase; a 100.0 5.1E-81 1.7E-85 644.7 36.5 399 1-447 56-454 (455)
4 1p5d_X PMM, phosphomannomutase 100.0 1E-79 3.6E-84 636.3 39.8 393 1-447 63-456 (463)
5 1tuo_A Putative phosphomannomu 100.0 2.3E-79 7.8E-84 633.0 31.5 394 1-444 63-463 (464)
6 3pdk_A Phosphoglucosamine muta 100.0 3.9E-77 1.3E-81 615.2 32.8 385 1-447 76-466 (469)
7 3i3w_A Phosphoglucosamine muta 100.0 8.5E-77 2.9E-81 609.5 33.3 385 1-446 56-441 (443)
8 3na5_A Phosphoglucomutase; iso 100.0 4E-77 1.4E-81 627.7 30.5 415 2-448 118-568 (570)
9 4hjh_A Phosphomannomutase; str 100.0 8.5E-75 2.9E-79 601.5 34.1 393 1-445 64-473 (481)
10 3pmg_A Alpha-D-glucose-1,6-bis 100.0 4.3E-75 1.5E-79 611.8 25.5 428 1-459 68-553 (561)
11 2z0f_A Putative phosphoglucomu 100.0 5.1E-74 1.7E-78 602.4 27.0 409 1-447 77-523 (524)
12 1kfi_A Phosphoglucomutase 1; p 100.0 8.8E-73 3E-77 597.6 26.9 427 1-458 73-563 (572)
13 2dka_A Phosphoacetylglucosamin 100.0 3.3E-61 1.1E-65 505.9 16.2 375 40-444 53-544 (544)
14 1wjw_A Phosphoacetylglucosamin 99.5 1.8E-16 6.1E-21 130.4 -2.1 92 339-447 5-97 (112)
15 2dka_A Phosphoacetylglucosamin 72.6 1.6 5.6E-05 45.1 2.6 32 2-33 148-180 (544)
16 2vvr_A Ribose-5-phosphate isom 66.9 16 0.00054 30.6 7.0 65 136-209 2-69 (149)
17 3ph3_A Ribose-5-phosphate isom 64.2 11 0.00039 32.1 5.7 67 134-209 19-88 (169)
18 3he8_A Ribose-5-phosphate isom 62.5 13 0.00045 31.1 5.7 65 136-209 1-68 (149)
19 3brc_A Conserved protein of un 62.2 17 0.00058 29.9 6.0 82 137-224 38-124 (156)
20 3qay_A Endolysin; amidase A/B 60.7 21 0.00073 30.8 7.0 66 136-209 2-88 (180)
21 2ppw_A Conserved domain protei 54.0 39 0.0013 30.0 7.5 110 135-271 3-118 (216)
22 3k7p_A Ribose 5-phosphate isom 51.0 29 0.00099 29.9 6.0 65 136-209 23-92 (179)
23 3s5p_A Ribose 5-phosphate isom 49.7 14 0.00047 31.5 3.7 67 135-209 21-89 (166)
24 1o1x_A Ribose-5-phosphate isom 45.5 59 0.002 27.3 6.9 68 134-209 11-80 (155)
25 3sz8_A 2-dehydro-3-deoxyphosph 42.8 32 0.0011 32.0 5.5 59 135-195 195-270 (285)
26 3sgw_A Ribose 5-phosphate isom 41.7 40 0.0014 29.1 5.4 68 134-209 28-100 (184)
27 2jpi_A Hypothetical protein; a 40.7 60 0.0021 25.8 6.1 70 373-447 35-104 (118)
28 3ono_A Ribose/galactose isomer 38.7 87 0.003 27.7 7.3 107 135-270 3-116 (214)
29 3ne8_A N-acetylmuramoyl-L-alan 36.2 68 0.0023 28.8 6.4 63 134-209 3-85 (234)
30 3he8_A Ribose-5-phosphate isom 35.8 46 0.0016 27.8 4.7 49 2-52 14-67 (149)
31 1zco_A 2-dehydro-3-deoxyphosph 35.5 59 0.002 29.8 6.0 60 135-196 192-257 (262)
32 4em8_A Ribose 5-phosphate isom 34.5 65 0.0022 26.8 5.5 22 2-23 21-42 (148)
33 3ph3_A Ribose-5-phosphate isom 34.2 49 0.0017 28.2 4.7 49 2-52 34-87 (169)
34 1o1x_A Ribose-5-phosphate isom 34.2 41 0.0014 28.3 4.2 24 2-25 26-49 (155)
35 2vvp_A Ribose-5-phosphate isom 33.2 64 0.0022 27.3 5.3 67 136-209 4-72 (162)
36 2nml_A Enhancer of rudimentary 32.5 1.2E+02 0.0041 23.5 6.2 53 408-461 5-64 (104)
37 2vvr_A Ribose-5-phosphate isom 30.4 49 0.0017 27.6 4.1 23 2-24 15-37 (149)
38 3m20_A 4-oxalocrotonate tautom 27.4 40 0.0014 23.0 2.7 30 418-447 1-30 (62)
39 1jwq_A N-acetylmuramoyl-L-alan 25.8 82 0.0028 26.9 4.9 23 187-209 61-83 (179)
40 2nwr_A 2-dehydro-3-deoxyphosph 25.5 85 0.0029 28.9 5.2 57 137-195 178-251 (267)
41 1otf_A 4-oxalocrotonate tautom 25.0 57 0.002 21.8 3.1 31 418-448 1-32 (62)
42 2vvp_A Ribose-5-phosphate isom 24.6 66 0.0023 27.2 3.9 22 2-23 17-38 (162)
43 3ulb_A Target of rapamycin com 24.2 1E+02 0.0035 24.6 4.6 50 396-446 63-116 (121)
44 2qn6_B Translation initiation 23.3 1E+02 0.0035 23.4 4.4 30 417-446 51-80 (93)
45 1vs1_A 3-deoxy-7-phosphoheptul 22.8 41 0.0014 31.2 2.5 60 135-196 207-272 (276)
46 3ry0_A Putative tautomerase; o 22.7 68 0.0023 22.0 3.1 31 418-448 1-32 (65)
47 2opa_A Probable tautomerase YW 22.3 74 0.0025 21.2 3.2 31 418-448 1-32 (61)
48 2hc5_A ORF 99, hypothetical pr 22.2 1.5E+02 0.0052 23.4 5.4 51 184-234 41-97 (117)
49 4em8_A Ribose 5-phosphate isom 21.2 58 0.002 27.1 2.8 28 136-163 8-37 (148)
No 1
>3uw2_A Phosphoglucomutase/phosphomannomutase family PROT; structural genomics, seattle structural genomics center for infectious disease; 1.95A {Burkholderia thailandensis}
Probab=100.00 E-value=3e-81 Score=647.19 Aligned_cols=398 Identities=28% Similarity=0.394 Sum_probs=332.5
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCCchhhhhhhcc---ccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLT---EGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKD 77 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~g~~~tP~~~~a~~~---~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~ 77 (461)
||++++++||+++|++|+++|.+|||+++|+++. ++. .++++++||||||||||++||||||++ +|.++.++..+
T Consensus 77 ~~~~a~a~gl~a~Gi~V~~~g~~pTP~l~~av~~~~~~~~-~~~~~~~GImITASHNP~~~NGiK~~~-~G~~i~~~~~~ 154 (485)
T 3uw2_A 77 ELVGALADGLRAAGVDVVDVGMVPTPVGYFAASVPLALSG-GERRVDSCIVVTGSHNPPDYNGFKMVL-RGAAIYGDQIQ 154 (485)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECCHHHHHHHTTSCEEETT-EEECCCCEEEECCTTSCTTEEEEEEEE-TTEECCTHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCChHHHHHHHhccccccc-cccCCCeEEEEEeCCCCcccceEEEec-CCCCCCHHHHH
Confidence 5899999999999999999999999999999961 000 035789999999999999999999998 67766655555
Q ss_pred HHHHHHhHHhhhhhcccccccccCCCcEEEEcchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhh
Q 012560 78 ILERAADIYKQFMVEGLTNLEKQTSTSIKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEP 157 (461)
Q Consensus 78 ~ie~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~ 157 (461)
.|++... .++++ + ..+.+...+..+.|++++.+.++. .+++|||+||+||+++.+++++|++
T Consensus 155 ~I~~~~~------~~~~~---~-~~g~~~~~d~~~~Yi~~l~~~i~~--------~~~lkIvvD~~~Ga~~~~~~~il~~ 216 (485)
T 3uw2_A 155 GLYKRIV------DARFE---T-GSGSYEQYDVADQYVERIVGDIKL--------TRPLKLVVDAGNGVAGPLATRLFKA 216 (485)
T ss_dssp HHHHHHH------TTCCC---C-CCCCEEECCCHHHHHHHHHTTCCC--------SSCCCEEEECTTSTHHHHHHHHHHH
T ss_pred HHHHHHh------cCCcc---c-CCceEEecchHHHHHHHHHHhcCc--------ccCCEEEEEcCCCcHHHHHHHHHHH
Confidence 4554321 12221 1 245677778999999999876641 2579999999999999999999999
Q ss_pred cCCCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHH
Q 012560 158 LGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLE 237 (461)
Q Consensus 158 lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~~l~ 237 (461)
|||+++ .+|+.|||.||++.|||+.+++|+.+.+.|++.++|+|+++||||||++++|++|+++++|++++|+++++++
T Consensus 217 lG~~v~-~~~~~pDg~Fp~~~p~P~~~~~l~~l~~~v~~~~aDlgia~DgDaDR~~vvd~~G~~i~gd~~~alla~~ll~ 295 (485)
T 3uw2_A 217 LGCELV-ELFTDIDGNFPNHHPDPAHPENLQDVIAKLKATDAEIGFAFDGDGDRLGVVTKDGQIIYPDRQLMLFAEEVLS 295 (485)
T ss_dssp TTCCEE-EESCSCCTTCCSSCSCTTSGGGGHHHHHHHHHSSCCEEEEECTTSSCEEEECTTSCBCCHHHHHHHHHHHHHH
T ss_pred cCCeEE-EecCccCCCCCCCCcCCCCHHHHHHHHHHHHhhCCCEEEEECCCCCeEEEEeCCCceECHHHHHHHHHHHHHH
Confidence 999998 5899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecCCcc-CCcHHHHHH
Q 012560 238 EHPGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHW-LDDGAYLMV 316 (461)
Q Consensus 238 ~~~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~-~~Dgi~aa~ 316 (461)
++++..||.+++||..+.+.+ +++|+++++||||||||+++|.+.++ .||||+|||++|+++++ ++||+++++
T Consensus 296 ~~~~~~vv~~v~ss~~l~~~~-~~~g~~~~~t~vG~k~i~~~m~~~~~-----~~ggE~SG~~~f~~~~~~~~Dgi~aal 369 (485)
T 3uw2_A 296 RNPGAQIIYDVKCTRNLARWV-REKGGEPLMWKTGHSLVKAKLRETGA-----PLAGEMSGHVFFKDRWYGFDDGLYTGA 369 (485)
T ss_dssp HSTTCEEEEETTSCTHHHHHH-HHTTCEEEEECSSHHHHHHHHHHHCC-----SEEECTTSCEEETTTTCSSBCHHHHHH
T ss_pred hCCCCeEEEEeCCcHHHHHHH-HHcCCEEEEEcCChHHHHHHHHhhcc-----cceecccCcEeeccccCCCCcHHHHHH
Confidence 888778888888888676655 66799999999999999999998764 59999999999998654 689999999
Q ss_pred HHHHHHHHHHHcCCCCCcccHHHHHhhccCCCccceeeeeecccCCcccCCccchhhHHHHHHHHhhhcCCCCCCCCCcc
Q 012560 317 KLLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVN 396 (461)
Q Consensus 317 ~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~ 396 (461)
++++.|+.. + +|++++++||+++.+.+++ +. |+| +.+.++|++|.+... .. ...+++.
T Consensus 370 ~lle~la~~----~-----~lsel~~~lp~~~~~~~~~--v~--~~~-------~~~~~~~~~l~~~~~-~~-~~~~~~~ 427 (485)
T 3uw2_A 370 RLLEILARV----A-----DPSALLNGLPNAVSTPELQ--LK--LEE-------GENVKLIDKLRADAK-FD-GADEVVT 427 (485)
T ss_dssp HHHHHHTTS----S-----CHHHHHHTSCCCEECCCEE--C---------------CTHHHHHHHHSCC-CT-TCSEEEC
T ss_pred HHHHHHHhc----C-----CHHHHHHHhhHhhCCceEE--Ee--CCc-------hhHHHHHHHHHhhhc-cc-ccccccc
Confidence 998887653 2 3999999999986554444 33 665 235689999987532 11 1124678
Q ss_pred cCceEEEecCeEEEEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcCC
Q 012560 397 YEGVRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFP 447 (461)
Q Consensus 397 ~dGlki~~~~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v~~~~ 447 (461)
+||+|+.+++||+|||||||||++|||+||.|++.++++++.+.+.|+++.
T Consensus 428 ~DGvrv~~~~gwvlvRpSgTEP~lrv~~Ea~~~~~~~~l~~~~~~~i~~~~ 478 (485)
T 3uw2_A 428 IDGLRVEYPDGFGLARSSNTTPVVVLRFEATSDAALARIQDDFRRALKAAK 478 (485)
T ss_dssp SSSEEEEETTEEEEEEECSSSSSEEEEEEESSHHHHHHHHHHHHHHHHHHS
T ss_pred cceEEEEeCCcEEEEEecCCCCeEEEEEEeCCHHHHHHHHHHHHHHHHHhc
Confidence 899999999999999999999999999999999999999999999999764
No 2
>2f7l_A 455AA long hypothetical phospho-sugar mutase; phosphomannomutase, phosphoglucomutase, isomerase; 2.80A {Sulfolobus tokodaii}
Probab=100.00 E-value=4.9e-81 Score=644.85 Aligned_cols=398 Identities=23% Similarity=0.294 Sum_probs=335.5
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie 80 (461)
||++++++||+++|++|+++|.+|||+++|+++ +++|++||||||||||++||||||++++|.++.++.++.|+
T Consensus 52 ~~~~a~a~gl~~~G~~V~~~g~~pTP~~~~av~------~~~~~~GImITASHNP~~~NGiK~~~~~G~~~~~~~~~~I~ 125 (455)
T 2f7l_A 52 MLVKIVEGGLLSVGVEVYDGGMAPTPALQYAVK------TLGYDGGVVITASHNPAPYNGIKVVDKDGIEIRREKENEIE 125 (455)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECCHHHHHHHHH------HHCCSEEEEECCTTSCTTEEEEEEECTTSSBCCHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCcEEEcCCCCcHHHHHHHH------hcCCCeEEEEEcCCCChHHCEEEEECCCCCCCCHHHHHHHH
Confidence 589999999999999999999999999999997 57899999999999999999999999999998887777776
Q ss_pred HHHhHHhhhhhcccccccccCCC-cEE-EEcchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhc
Q 012560 81 RAADIYKQFMVEGLTNLEKQTST-SIK-RVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPL 158 (461)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~-~i~-~~~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~l 158 (461)
..... +.+.+.. ....+ .+. ..+..+.|++++.+.++.+.+ +.+++|||+||+||+++.+++++|++|
T Consensus 126 ~~~~~-~~~~~~~-----~~~~g~~~~~~~~~~~~Y~~~l~~~~~~~~i----~~~~lkivvd~~~G~~~~~~~~~l~~l 195 (455)
T 2f7l_A 126 DLFFT-ERFNTIE-----WSSLTTEVKREDRVISTYVNGILSHVDIEKI----KKKNYKVLIDPANSVGALSTPLVARAL 195 (455)
T ss_dssp HHHHH-TCCCCCC-----GGGCCCCCEECCCHHHHHHHHHHTTSCHHHH----HHHCCEEEEECTTTGGGGTHHHHHHHT
T ss_pred HHHhc-CCCCcCc-----hhcCCceeecccchHHHHHHHHHhhcChhhc----ccCCCEEEEECCCchHHHHHHHHHHHc
Confidence 54321 1111111 11123 443 347889999999887653221 235899999999999999999999999
Q ss_pred CCCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHh
Q 012560 159 GAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEE 238 (461)
Q Consensus 159 g~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~~l~~ 238 (461)
||+++ .+|+.|||.||++.|||+. ++++.+.+.|++.++|+|+++||||||++++|++|+++++|++++|+++++++.
T Consensus 196 G~~v~-~~~~~pDg~F~~~~p~p~~-~~l~~l~~~v~~~~adlgia~DgDaDR~~~vd~~g~~l~gd~i~~lla~~l~~~ 273 (455)
T 2f7l_A 196 GCKIY-TINGNLDPLFSARQPEPTF-DSLKETAEVVKTLKVDLGVAHDGDADRAIFIDSEGRVQWGDRSGTLLSYWASVK 273 (455)
T ss_dssp TCEEE-EBSCSCCTTCTTSCSSCCT-TTSHHHHHHHHHTTCSEEEECCTTSCCCEEEETTSCBCCHHHHHHHHHHHHHHT
T ss_pred CCEEE-EECCcCCCCCCCCCcCcch-HHHHHHHHHHHHcCCCEEEEECCCCCeEEEEcCCCeEEChHHHHHHHHHHHHHh
Confidence 99988 5889999999999999996 679999999999999999999999999999999999999999999999999987
Q ss_pred C--CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecCCccCCcHHHHHH
Q 012560 239 H--PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMV 316 (461)
Q Consensus 239 ~--~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~ 316 (461)
+ ++..||.+.+||. .++.+++++|+++++|+||||||+++|.+.+ +.||||+|||++|+++.+.+||+++++
T Consensus 274 ~~~~~~~vv~tv~ss~-~l~~~a~~~g~~~~~t~~G~k~i~~~m~~~~-----~~~ggE~Sgg~~~~~~~~~~Dgi~a~l 347 (455)
T 2f7l_A 274 NPKAIKKIVTAVSSSS-LVEEYLSKYNIQVDWTKVGSVDIAHKVADEN-----ALAGFEENGGFMYPPHQYVRDGAMSFA 347 (455)
T ss_dssp CTTSCSEEEEETTSCT-HHHHHHHTTTCEEEEECSCHHHHHHHHHHTT-----CSEEEETTEEEEBTTTBSSCCHHHHHH
T ss_pred CccCCCeEEEEecccH-HHHHHHHHcCCEEEEEcCcHHHHHHHHHhcC-----cEEEEcCcCcEEECCcCCCCCHHHHHH
Confidence 6 4556887777776 6677889999999999999999999999865 469999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcccHHHHHhhccCCCccceeeeeecccCCcccCCccchhhH-HHHHHHHhhhcCCCCCCCCCc
Q 012560 317 KLLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGE-AVLKHLENRVDSDPKLQKAPV 395 (461)
Q Consensus 317 ~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~l~~~~~~~~~~~~~~~ 395 (461)
++++.|+..+ ++|+|+++++|.++. .+.++. |++ +.+. ++|+++.+..... + ..+.
T Consensus 348 ~~le~~a~~g--------~~L~ell~~~~~~~~---~~~~v~--~~~-------~~~~~~~~~~l~~~~~~~-~--~~~~ 404 (455)
T 2f7l_A 348 LMLELLANEN--------VSSAELFDRLPKYYL---VKTKVD--LKP-------GLMVEEIYKKILEVYSTS-S--VKAI 404 (455)
T ss_dssp HHHHHHHHHT--------CCHHHHHHTSCCCEE---EEEEEE--CCT-------TCCHHHHHHHHHHHHCCT-T--SEEE
T ss_pred HHHHHHHhhC--------CCHHHHHHhCCCCee---eeEeEE--cCc-------HHHHHHHHHHHHHhchhc-c--cccc
Confidence 9999887543 459999999998642 234555 766 2245 8999998754321 1 2466
Q ss_pred ccCceEEEecCeEEEEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhc
Q 012560 396 NYEGVRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKE 445 (461)
Q Consensus 396 ~~dGlki~~~~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v~~ 445 (461)
.+||+|+.+++||++||||||||++|||+|+.+++.++++++.+.+.|++
T Consensus 405 ~~DGlr~~~~~gw~lvRpSgTEP~irvy~Ea~~~~~~~~~~~~~~~~i~~ 454 (455)
T 2f7l_A 405 TIDGVKIIGKDFWFLVRKSGTEPIIRIMAEAKDENVANNLVNELKKIVEG 454 (455)
T ss_dssp CSSSEEEEETTEEEEEEECSSSSEEEEEEEESSHHHHHHHHHHHHHHHTT
T ss_pred cCceEEEEeCCcEEEEeeCCCCcEEEEEEEECCHHHHHHHHHHHHHHHhc
Confidence 78999999988999999999999999999999999999999999998864
No 3
>1wqa_A Phospho-sugar mutase; alpha-beta protein, unphosphorylated form, enzyme-metal COMP isomerase; 2.00A {Pyrococcus horikoshii}
Probab=100.00 E-value=5.1e-81 Score=644.75 Aligned_cols=399 Identities=28% Similarity=0.360 Sum_probs=338.9
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie 80 (461)
||++++++||+++|++|+++|.+|||+++|+++ ++++++||||||||||++||||||++++|.++.++.++.|+
T Consensus 56 ~l~~a~~~gl~~~G~~V~~~g~~pTP~l~~~v~------~~~~~~GimITASHNP~~~NGiK~~~~~G~~~~~~~~~~Ie 129 (455)
T 1wqa_A 56 MLKEALISGLLSVGCDVIDVGIAPTPAVQWATK------HFNADGGAVITASHNPPEYNGIKLLEPNGMGLKKEREAIVE 129 (455)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECCHHHHHHHHH------HTTCSEEEEECCTTSCTTEEEEEEECTTSSBCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCeEEEeCCCChHHHHHHHH------hcCCCEEEEEEeCCCChHHCeEEEEcCCCCcCCHHHHHHHH
Confidence 589999999999999999999999999999997 67899999999999999999999999999998888777776
Q ss_pred HHHhHHhhhhhcccccccccCCCcEEEEcchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcCC
Q 012560 81 RAADIYKQFMVEGLTNLEKQTSTSIKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLGA 160 (461)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~lg~ 160 (461)
+.... +.+.+.. ....+.+...+..+.|++++.+.++.+.+ +.+++|||+||+||+++.+++++|++|||
T Consensus 130 ~~~~~-~~~~~~~-----~~~~g~~~~~~~~~~Y~~~l~~~~~~~~~----~~~~lkivvd~~nG~~~~~~~~~l~~lG~ 199 (455)
T 1wqa_A 130 ELFFK-EDFDRAK-----WYEIGEVRREDIIKPYIEAIKSKVDVEAI----KKRKPFVVVDTSNGAGSLTLPYLLRELGC 199 (455)
T ss_dssp HHHHH-TCCCCCC-----GGGCCCEEECCCHHHHHHHHHTTSCHHHH----HHHCCEEEEECTTSGGGGTHHHHHHHHTC
T ss_pred HHHhc-CCcccCC-----ccCCcceeccchHHHHHHHHHhhCChhhc----ccCCCEEEEECCCccHHHHHHHHHHHcCC
Confidence 64321 1111111 11235555558999999999887653221 23589999999999999999999999999
Q ss_pred CcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhCC
Q 012560 161 KTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEHP 240 (461)
Q Consensus 161 ~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~~l~~~~ 240 (461)
+++ .+|+.|||.||++.|+|.. ++++.+.+.|++.++|+|+++||||||++++|++|+++++|++++|+++++++.++
T Consensus 200 ~v~-~~~~~pdg~f~~~~~~p~~-~~l~~l~~~v~~~~adlgia~DgDaDR~~~vd~~G~~l~gd~i~~lla~~l~~~~~ 277 (455)
T 1wqa_A 200 KVI-TVNAQPDGYFPARNPEPNE-ENLKEFMEIVKALGADFGVAQDGDADRAVFIDENGRFIQGDKTFALVADAVLKEKG 277 (455)
T ss_dssp EEE-EESCSCCTTCSSSCSCCCT-TTTHHHHHHHHHHTCSEEEEECTTSCCEEEEETTSCBCCHHHHHHHHHHHHHHHHT
T ss_pred EEE-EECCcCCCCCCCCCCCCch-hHHHHHHHHHHHcCCCEEEEECCCCCeEEEEeCCCCEEChhHHHHHHHHHHHHhCC
Confidence 988 5899999999998888874 77899999999999999999999999999999999999999999999999998766
Q ss_pred CCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecCCccCCcHHHHHHHHHH
Q 012560 241 GTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVKLLN 320 (461)
Q Consensus 241 ~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ll~ 320 (461)
+..||.+.+||. .++.+++++|+++++|+|||||++++|.+.+ +.||||+|||++|+++.+.+||+++++++++
T Consensus 278 ~~~vv~tv~ss~-~l~~~a~~~g~~~~~t~tG~k~i~~~m~~~~-----~~~ggE~sgg~~~~~~~~~~Dgi~a~l~~le 351 (455)
T 1wqa_A 278 GGLLVTTVATSN-LLDDIAKKHGAKVMRTKVGDLIVARALYENN-----GTIGGEENGGVIFPEHVLGRDGAMTVAKVVE 351 (455)
T ss_dssp SCEEEEETTSCT-HHHHHHHHTTCEEEEECSSTTHHHHHHHHTT-----CSEEEETTEEEECTTTCSSCCHHHHHHHHHH
T ss_pred CCeEEEeecCcH-HHHHHHHHCCCEEEEEcCcHHHHHHHHHhCC-----ceEEEcCcCcEEECCcCcCccHHHHHHHHHH
Confidence 667887777776 5577888899999999999999999999865 4699999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcccHHHHHhhccCCCccceeeeeecccCCcccCCccchhhHHHHHHHHhhhcCCCCCCCCCcccCce
Q 012560 321 KLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYEGV 400 (461)
Q Consensus 321 ~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~dGl 400 (461)
.|+.. + ++|+++++++|.++ +.+.++. |++ + +.++|+++.+..... + ..+..+||+
T Consensus 352 ~l~~~----g----~~L~~~~~~l~~~~---~~~~~v~--~~~-------~-~~~~~~~l~~~~~~~-~--~~~~~~DGl 407 (455)
T 1wqa_A 352 IFAKS----G----KKFSELIDELPKYY---QIKTKRH--VEG-------D-RHAIVNKVAEMARER-G--YTVDTTDGA 407 (455)
T ss_dssp HHHHH----C----SCHHHHHHTSCCCE---EEEECCB--CCS-------S-HHHHHHHHHHHHHHT-T--CEEECTTSE
T ss_pred HHHhc----C----CCHHHHHHhccccc---EeeEeeE--cCc-------H-HHHHHHHHHHhhHhh-c--cccccCceE
Confidence 88754 3 45999999999854 2234555 776 4 678999997754321 1 246678999
Q ss_pred EEEecCeEEEEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcCC
Q 012560 401 RVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFP 447 (461)
Q Consensus 401 ki~~~~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v~~~~ 447 (461)
|+.+++||++||||||||++|||+|+.+++.++++++.+.+.|++++
T Consensus 408 r~~~~~gw~lvRpSgTEP~irvy~Ea~~~~~~~~l~~~~~~~i~~~~ 454 (455)
T 1wqa_A 408 KIIFEDGWVLVRASGTEPIIRIFSEAKSKEKAQEYLNLGIELLEKAL 454 (455)
T ss_dssp EEECSSCEEEECCCSSSSBCCEEEEESSHHHHHHHHHHHHHHHHHHT
T ss_pred EEEecCcEEEEEeCCCCceEEEEEEECCHHHHHHHHHHHHHHHHHhh
Confidence 99998889999999999999999999999999999999999998765
No 4
>1p5d_X PMM, phosphomannomutase; alpha/beta protein, phosphohexomutase, phosphoserine, enzyme complex, enzyme-metal complex, isomerase; HET: SEP G1P; 1.60A {Pseudomonas aeruginosa} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1k35_A* 1p5g_X* 1pcj_X* 1pcm_X* 1k2y_X* 2h5a_X* 2h4l_X* 2fkf_A* 3rsm_A 3bkq_X* 3c04_A* 2fkm_X*
Probab=100.00 E-value=1e-79 Score=636.29 Aligned_cols=393 Identities=27% Similarity=0.425 Sum_probs=336.0
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie 80 (461)
||++++++||+++|++|+++|.+|||+++|+++ ++++++||||||||||++||||||++ +|.++.++.++.|+
T Consensus 63 ~l~~a~~~gl~a~G~~V~~~g~~pTP~l~~av~------~~~~~~GImITASHNP~~~NGiK~~~-~G~~i~~~~~~~I~ 135 (463)
T 1p5d_X 63 ELVKQLIQGLVDCGCQVSDVGMVPTPVLYYAAN------VLEGKSGVMLTGSHNPPDYNGFKIVV-AGETLANEQIQALR 135 (463)
T ss_dssp HHHHHHHHHHHTBTCEEEEEEECCHHHHHHHHH------HSSCSEEEEECCTTSCTTEEEEEEEE-TTEECCTHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCChHHHHHHHH------hcCCCeEEEEccCCCCcccceEEEEC-CCccCCHHHHHHHH
Confidence 589999999999999999999999999999997 57899999999999999999999999 99887777666666
Q ss_pred HHHhHHhhhhhcccccccccCCCcEEEEcchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcCC
Q 012560 81 RAADIYKQFMVEGLTNLEKQTSTSIKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLGA 160 (461)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~lg~ 160 (461)
+.... .+++ + ..+.+...+..+.|++++.+.++. .+++|||+||+||+++.+++++|++|||
T Consensus 136 ~~~~~------~~~~---~-~~g~~~~~d~~~~Y~~~l~~~~~~--------~~~lkivvD~~nG~~~~~~~~ll~~lG~ 197 (463)
T 1p5d_X 136 ERIEK------NDLA---S-GVGSVEQVDILPRYFKQIRDDIAM--------AKPMKVVVDCGNGVAGVIAPQLIEALGC 197 (463)
T ss_dssp HHHHH------TCCC---C-BCCEEEECCCHHHHHHHHHTTCCC--------SSCEEEEEECTTSGGGGTHHHHHHHHHE
T ss_pred HHHhc------CCcc---c-CCCceecCChHHHHHHHHHhhhcc--------cCCCEEEEECCCCcHHHHHHHHHHHcCC
Confidence 54321 1111 1 245666778999999999876631 1589999999999999999999999999
Q ss_pred CcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhCC
Q 012560 161 KTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEHP 240 (461)
Q Consensus 161 ~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~~l~~~~ 240 (461)
+++ .+|+.|||.||++.|||+.+++++.+.+.|++.++|+|+++||||||++++|++|+++++|++++|+++++++..+
T Consensus 198 ~v~-~~~~~pDg~f~~~~p~p~~~~~l~~l~~~v~~~~adlgia~DgDaDR~~~vd~~G~~l~gd~i~~L~a~~l~~~~~ 276 (463)
T 1p5d_X 198 SVI-PLYCEVDGNFPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKDVVSRNP 276 (463)
T ss_dssp EEE-EESCSCCTTCCSSCSCTTSGGGGHHHHHHHHHTTCSEEEEECTTSSBEEEEETTCCEECHHHHHHHHHHHHHHHST
T ss_pred eEE-EEeCccCCCCCCCCcCCCCHHHHHHHHHHHHHhCCCEEEEECCCCCeEEEEeCCCcEeCHHHHHHHHHHHHHHhCC
Confidence 988 5899999999999999999899999999999999999999999999999999999999999999999999999877
Q ss_pred CCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecCCcc-CCcHHHHHHHHH
Q 012560 241 GTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHW-LDDGAYLMVKLL 319 (461)
Q Consensus 241 ~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~-~~Dgi~aa~~ll 319 (461)
+..+|.+++||..+ +.+++++|+++++|+|||||+.++|.+.+. .||||+|||++|++++. .+||++++++++
T Consensus 277 ~~~vv~~v~ss~~l-~~~~~~~g~~~~~t~tG~k~i~~~m~~~~~-----~~ggE~sG~~~~~~~~~~~~Dgi~aal~~l 350 (463)
T 1p5d_X 277 GADIIFDVKCTRRL-IALISGYGGRPVMWKTGHSLIKKKMKETGA-----LLAGEMSGHVFFKERWFGFDDGIYSAARLL 350 (463)
T ss_dssp TCEEEEETTSCTHH-HHHHHHTTCEEEEECSSHHHHHHHHHHHCC-----SEEECTTSBEEETTTTCSSBCHHHHHHHHH
T ss_pred CCeEEEEecCcHHH-HHHHHHcCCEEEEeCCcHHHHHHHHHhcCC-----ceeecCCCcEEeccccCCCCcHHHHHHHHH
Confidence 77788788777755 567788999999999999999999998764 59999999999998554 689999999998
Q ss_pred HHHHHHHHcCCCCCcccHHHHHhhccCCCccceeeeeecccCCcccCCccchhhHHHHHHHHhhhcCCCCCCCCCcccCc
Q 012560 320 NKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYEG 399 (461)
Q Consensus 320 ~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~dG 399 (461)
+.++.. + ++|+|++++||+++.+.+++ +. |++ ..+.++|+++.+.. +.++. .++.+||
T Consensus 351 e~~a~~----g----~~Ls~ll~~l~~~~~~~~~~--v~--~~~-------~~~~~~~~~l~~~~-~~~~~--~~~~~DG 408 (463)
T 1p5d_X 351 EILSQD----Q----RDSEHVFSAFPSDISTPEIN--IT--VTE-------DSKFAIIEALQRDA-QWGEG--NITTLDG 408 (463)
T ss_dssp HHHHTC----S----SCHHHHHHTSCCCEECCCEE--EE--CCT-------TTHHHHHHHHHHHC-CCCSS--EEECSSS
T ss_pred HHHHHh----C----CCHHHHHHHhhHhhCceeEE--EE--cCc-------hhHHHHHHHHHhcc-ccCCC--cccccce
Confidence 887653 3 45999999999986543433 44 665 23678999994432 11111 4567899
Q ss_pred eEEEecCeEEEEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcCC
Q 012560 400 VRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFP 447 (461)
Q Consensus 400 lki~~~~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v~~~~ 447 (461)
+|+.+++||++||||||||++|||+|+.|++.++++++.+.++|+++.
T Consensus 409 lr~~~~~gw~lvRpSgTEP~~rvy~Ea~~~~~~~~l~~~~~~~i~~~~ 456 (463)
T 1p5d_X 409 VRVDYPKGWGLVRASNTTPVLVLRFEADTEEELERIKTVFRNQLKAVD 456 (463)
T ss_dssp EEEEETTEEEEEEECSSSSEEEEEEEESSHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEecCcEEEEEecCCCceEEEEEEECCHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999998875
No 5
>1tuo_A Putative phosphomannomutase; thermus thermophilus HB8, biosynthesis of alginate, structural genomics; 1.70A {Thermus thermophilus}
Probab=100.00 E-value=2.3e-79 Score=633.04 Aligned_cols=394 Identities=21% Similarity=0.222 Sum_probs=317.1
Q ss_pred CHHHHHHHHHHhCCCcEE-EeCCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHH
Q 012560 1 MLQDAVSRGITGAGLDVV-QYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDIL 79 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~-~~g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~i 79 (461)
||++++++||+++|++|+ +.|.+|||+++|+++ ++++++||||||||||++||||||++++|.++.++.++.+
T Consensus 63 ~~~~a~a~gl~~~G~~V~~~~g~~pTP~~~~av~------~~~~~~GImITASHNP~~~NGiK~~~~~G~~i~~~~~~~I 136 (464)
T 1tuo_A 63 AFARALSGHLAGMGLKVVLLKGPVPTPLLSFAVR------HLKAAGGAMLTASHNPPQYLGVKFKDATGGPIAQEEAKAI 136 (464)
T ss_dssp HHHHHHHHHHHHHTCEEEEESSSCCHHHHHHHHH------HTTCSEEEEECCTTSCTTEEEEEEEETTTEECCHHHHHHH
T ss_pred HHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHHHH------HhCCCceEEEcCCCCCchHCCEEEEcCCCCcCChHHHHHH
Confidence 589999999999999996 679999999999997 6789999999999999999999999999999988887777
Q ss_pred HHHHhHHhhhhhcccccccccCCCcEEEEcchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012560 80 ERAADIYKQFMVEGLTNLEKQTSTSIKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (461)
Q Consensus 80 e~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~lg 159 (461)
|+... + .. ....+.+...+..+.|++++.+.++.+.+ +.+++|||+||+||+++.+++++|++||
T Consensus 137 e~~~~--~----~~-----~~~~g~~~~~d~~~~Y~~~l~~~~~~~~i----~~~~lkivvd~~nG~~~~~~~~~l~~lG 201 (464)
T 1tuo_A 137 EALVP--E----EA-----RALEGAYETLDLREAYFEALKAHLDLKAL----SGFSGVLYHDSMGGAGAGFLKGFLRHVG 201 (464)
T ss_dssp HHTCC--S----CC-----CCCCCCCEEECCHHHHHHHHHTTSCHHHH----TTCCSCEEEECTTSTTTTHHHHHHHHTT
T ss_pred HHHhc--C----Cc-----cccCCceEEcCcHHHHHHHHhhhcChhhc----cccCCEEEEECCCCcHHHHHHHHHHHCC
Confidence 66322 1 10 12345666779999999999987754332 3468999999999999999999999999
Q ss_pred C--CcccceecCCCCCCCCCCCCCCchHHHHHHHHHHH-hcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHH
Q 012560 160 A--KTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVL-DNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVL 236 (461)
Q Consensus 160 ~--~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~-~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~~l 236 (461)
| +++ .+|+.|||.||++.|||+. .++..+.+.++ +.++|+|+++||||||++++|++|+++++|++++|++++++
T Consensus 202 ~~~~v~-~~~~~pDg~Fp~~~p~p~~-~~~~~l~~~v~~~~~adlgia~DgDaDR~~vvd~~G~~l~gd~i~~Lla~~l~ 279 (464)
T 1tuo_A 202 LEIPVR-PIREEPHPLFHGVNPEPIP-KNLGVTLAVLGPETPPSFAVATDGDADRVGVVLPGGVFFNPHQVLTTLALYRF 279 (464)
T ss_dssp CCCCEE-EESCSCCTTGGGSCSCCSG-GGCHHHHHHHTTCCTTCEEEEECTTSSBEEEEETTTEEECHHHHHHHHHHHHH
T ss_pred CCceEE-EEecccCCCCCCCCcCCCc-hhHHHHHHHHHhccCCCEEEEECCCCCeEEEEeCCCEEECHHHHHHHHHHHHH
Confidence 9 887 5889999999999999996 56788999998 99999999999999999999999999999999999999999
Q ss_pred HhCCCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecCCccCCcHHHHHH
Q 012560 237 EEHPGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMV 316 (461)
Q Consensus 237 ~~~~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~ 316 (461)
+..++..||.+.+||. .++.+++++|+++++|||||||+.++|.+.+ +.||||+|||++|+++.+.+||+++++
T Consensus 280 ~~~~~~~vv~tv~ss~-~l~~~a~~~g~~~~~t~tG~k~i~~~m~~~~-----~~~ggE~Sgg~~~~~~~~~~Dgi~a~l 353 (464)
T 1tuo_A 280 RKGHRGRAVKNFAVTW-LLDRLGERLGFGVTTTPVGFKWIKEEFLKGD-----CFIGGEESGGVGYPEHLPERDGILTSL 353 (464)
T ss_dssp HTTCCSEEEEETTSCT-HHHHHHHHHTCCEEEECSSHHHHHHHHTTTC-----EEEEECTTSBEEETTTEEEECHHHHHH
T ss_pred hhCCCCeEEEeecchH-HHHHHHHHcCCeEEEecCcHHHHHHHHHhcC-----cEEEEccceeEEECCcCcCCCHHHHHH
Confidence 8655667887776666 6677888899999999999999999998754 579999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcccHHHHHhhccCCCc--cceeeeeecccCCcccCCccchhhHHHHHHHHhhhcCCCCCC-CC
Q 012560 317 KLLNKLASARAAGRGGGSKVLTDLVDGLEEPGF--AVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQ-KA 393 (461)
Q Consensus 317 ~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~-~~ 393 (461)
++++.++.. + ++|+|++++||+.+. ..+.+.++. |++ . .+|+++.+. .+..+.+ ..
T Consensus 354 ~~le~~a~~----g----~~L~ell~~l~~~~~~~~~~~~~~v~--~~~-------~---~~~~~l~~~-~~~~~~~~~~ 412 (464)
T 1tuo_A 354 LLLESVAAT----G----KDLAEQFKEVEALTGLTHAYDRLDLP--LKA-------P---LDLTPFREP-RPLAGLTPKG 412 (464)
T ss_dssp HHHHHHHHH----S----CCHHHHHHHHHHHHTCCCEEEEEC----------------------------CCCTTCCEEE
T ss_pred HHHHHHHhh----C----CCHHHHHHHHHHHcCccccceEEeEE--eCC-------H---HHHHhhhhh-HhhCCCceeE
Confidence 999988754 3 459999977655432 234455566 776 1 278888653 2222222 13
Q ss_pred CcccCceEEEecCeEEEEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHhh
Q 012560 394 PVNYEGVRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATK 444 (461)
Q Consensus 394 ~~~~dGlki~~~~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v~ 444 (461)
+..+||+|+.+++||++||||||||++|||+|+.+++.++++++.+.+.|+
T Consensus 413 v~~~DGl~~~~~~~w~lvRpSgTEP~lrvy~Ea~~~~~~~~l~~~~~~~i~ 463 (464)
T 1tuo_A 413 VDTLDGVKWLYEEAWVLFRASGTEPVVRIYVEAQSPELVRALLEEARKLVE 463 (464)
T ss_dssp EECSSSEEEEETTEEEEEECC-----CEEEEEESSHHHHHHHHHHHHTTTC
T ss_pred EEcCCeEEEEECCEEEEEEcCCCccEEEEEEEeCCHHHHHHHHHHHHHHhc
Confidence 567899999998899999999999999999999999999999999888764
No 6
>3pdk_A Phosphoglucosamine mutase; 4-domain architecture, mixed A/B fold, phosphohexomutase; 2.70A {Bacillus anthracis}
Probab=100.00 E-value=3.9e-77 Score=615.22 Aligned_cols=385 Identities=24% Similarity=0.303 Sum_probs=314.4
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie 80 (461)
||++++++||+++|++|+++|.+|||+++|+++ +++++|||||||||||++||||||++++|.+++++.++.|+
T Consensus 76 ~~~~a~a~gl~s~Gi~V~~~g~~pTP~l~fav~------~~~a~~GImITASHNP~~~NGiK~~~~~G~~i~~~~~~~Ie 149 (469)
T 3pdk_A 76 MLEGALVAGLLSTGAEVMRLGVISTPGVAYLTK------ALDAQAGVMISASHNPVQDNGIKFFGSDGFKLTDEQEAEIE 149 (469)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEECCHHHHHHHHH------HHTCSEEEEECCTTSCTTEEEEEEEETTSSBCCHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCChHHHHHHHH------hcCCCeEEEEEeCCCcchhCcEEEecCCCcCCCHHHHHHHH
Confidence 589999999999999999999999999999997 56899999999999999999999999999999888777776
Q ss_pred HHHhHHhhhhhcccccccccCCCcEEE-EcchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012560 81 RAADIYKQFMVEGLTNLEKQTSTSIKR-VDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (461)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~lg 159 (461)
+..... .++++.......+.+.. .++.+.|++++.+.++. ..+++|||+||+||+++.+++++|++||
T Consensus 150 ~~~~~~----~~~~~~~~~~~~g~~~~~~d~~~~Y~~~l~~~~~~-------~~~~lkivvD~~nG~~~~~~~~ll~~lG 218 (469)
T 3pdk_A 150 ALLDKE----VDELPRPTGTNLGQVSDYFEGGQKYLQYIKQTVEE-------DFSGLHIALDCAHGATSSLAPYLFADLE 218 (469)
T ss_dssp HHHHSS----SCCSCCCCGGGSCCEEECTHHHHHHHHHHHTTCSS-------CCTTCEEEEECTTSTTTTHHHHHHHHTT
T ss_pred HHHhcc----ccccCccccccCccEEEcccHHHHHHHHHHHhcCc-------ccCCCEEEEECCCchHHHHHHHHHHHcC
Confidence 643210 11221110112345553 36788899998877642 3578999999999999999999999999
Q ss_pred CCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012560 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (461)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~~l~~~ 239 (461)
|+++ .+|+.|||.||++.|+|..+ +.+.+.|++.++|+|+++||||||++++|++|+++++|++++|+++++++..
T Consensus 219 ~~v~-~l~~~pDg~f~n~~~~~~~~---~~l~~~v~~~~adlgia~DgDaDR~~~vd~~G~~l~gd~i~~Lla~~l~~~~ 294 (469)
T 3pdk_A 219 ADIS-TMGTSPNGMNINDGVGSTHP---EVLAELVKEKGADIGLAFDGDGDRLIAVDEKGNIVDGDQIMFICAKYMKETG 294 (469)
T ss_dssp CEEE-EESCCCCSSCTTSSCSTTST---HHHHHHHHHHTCSEEEEECTTSSBEEEEETTSCEECHHHHHHHHHHHHHHTT
T ss_pred CEEE-EECCCcCCCCCCCCCCCCCH---HHHHHHHHhcCCcEEEEECCCCCeEEEECCCCcEEChhHHHHHHHHHHHHhC
Confidence 9998 58999999999988877665 4577889999999999999999999999999999999999999999999865
Q ss_pred --CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecCCccCCcHHHHHHH
Q 012560 240 --PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVK 317 (461)
Q Consensus 240 --~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ 317 (461)
++..||.+++||. .++.+++++|+++++|+||||||+++|.+.+. .||||+|||++|+++.+.+||++++++
T Consensus 295 ~l~~~~vv~tv~ss~-~l~~~~~~~G~~~~~t~tG~k~i~~~m~~~~~-----~~ggE~SG~~~~~~~~~~~Dgi~aal~ 368 (469)
T 3pdk_A 295 QLKHNTVVSTVMSNL-GFYKALEANGITSDKTAVGDRYVMEEMKRGGY-----NLGGEQSGHIILLDYITTGDGMLSALQ 368 (469)
T ss_dssp CSGGGEEEEETTSCH-HHHHHHHHTTCEEEEECSSHHHHHHHHHHHTC-----CEEECTTSBEEETTTCSSCCHHHHHHH
T ss_pred CCCCCeEEEeecCcH-HHHHHHHHcCCEEEEEcCchHHHHHHHhhcCC-----eEEEcccCCEecCCCCCCCCHHHHHHH
Confidence 3456876666665 66778888999999999999999999998764 599999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcccHHHHHhhccCCCccceeeeeecccCCcccCCccchhhHHHHHH--HHhhhcCCCCCCCCCc
Q 012560 318 LLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKH--LENRVDSDPKLQKAPV 395 (461)
Q Consensus 318 ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--l~~~~~~~~~~~~~~~ 395 (461)
+++.|+..+ ++|+++++++|.+. ....+++ |+. ++++|+. +.+
T Consensus 369 ~le~l~~~g--------~~Lsel~~~l~~~~---~~~~~v~--~~~---------k~~~~~~~~~~~------------- 413 (469)
T 3pdk_A 369 LVNIMKMTK--------KPLSELAGEMTKFP---QLLVNVR--VTD---------KKLALENEKIKE------------- 413 (469)
T ss_dssp HHHHHHHHT--------CCHHHHHTTSCCCC---EEEEEEC--CSC---------HHHHTTCHHHHH-------------
T ss_pred HHHHHHHcC--------CCHHHHHHHHhhcC---ceEEEEe--cCc---------hhhhhccHHHHH-------------
Confidence 999886653 45999999999853 2233333 332 3444321 111
Q ss_pred ccCceEEE-ecCeEEEEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcCC
Q 012560 396 NYEGVRVS-GSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFP 447 (461)
Q Consensus 396 ~~dGlki~-~~~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v~~~~ 447 (461)
.+++++.. .++||+|||||||||++|||+||.|++.++++++.+.+.|++.+
T Consensus 414 ~i~~~~~~~~~~gw~lvRpSgTEP~lRv~~Ea~~~~~~~~l~~~~~~~i~~~~ 466 (469)
T 3pdk_A 414 IIRVVEEEMNGDGRILVRPSGTEPLIRVMAEAPTQEVCDAYVHRIVEVVKAEV 466 (469)
T ss_dssp HHHHHHHHCCSSCEEEEECCSSSCCEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHheEeCCCcEEEEEeCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHh
Confidence 12333222 47899999999999999999999999999999999999998753
No 7
>3i3w_A Phosphoglucosamine mutase; csgid, IDP02164, isomerase, magne metal-binding, phosphoprotein, structural genomics; HET: SEP; 2.30A {Francisella tularensis subsp}
Probab=100.00 E-value=8.5e-77 Score=609.52 Aligned_cols=385 Identities=23% Similarity=0.265 Sum_probs=315.1
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie 80 (461)
||++|+++||+++|++|+++|.+|||+++|+++ +++++|||||||||||++||||||++++|.+++++.++.||
T Consensus 56 ~l~~a~~~gl~s~G~~V~~~g~~pTP~~~~av~------~~~a~~GImITASHNP~~~NGiK~~~~~G~~l~~~~~~~Ie 129 (443)
T 3i3w_A 56 FLKFALVSGLNAAGIDVLDLGVVPTPVVAFMTV------KHRAAAGFVITASHNKFTDNGIKLFSSNGFKLDDALEEEVE 129 (443)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEECCHHHHHHHHH------HTTCSEEEEECCTTSCTTEEEEEEEETTSCBCCHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCeEEEeCCCCHHHHHHHHH------hcCCCeEEEEEECCCCchhCeEEEEcCCCCcCCHHHHHHHH
Confidence 689999999999999999999999999999997 57899999999999999999999999999999888777777
Q ss_pred HHHhHHhhhhhcccccccccCCCcEEEE-cchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012560 81 RAADIYKQFMVEGLTNLEKQTSTSIKRV-DYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (461)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~lg 159 (461)
+.... .+.+ ......+.+... +..+.|++++.+.++.. ++.++ |||+||+||+++.+++++|++||
T Consensus 130 ~~~~~--~~~~-----~~~~~~g~~~~~~d~~~~Y~~~l~~~~~~~-----i~~~~-kivvD~~nG~~~~~~~~ll~~lG 196 (443)
T 3i3w_A 130 DMIDG--DFIY-----QPQFKFGSYKILANAIDEYIESIYSRFAKF-----VNYKG-KVVVDCAHGAASHNFEALLDKFG 196 (443)
T ss_dssp HHHTS--CCCC-----CTTSCCCCEEECTTTTHHHHHHHHHHHTTT-----CCCCS-EEEEECTTSTTTTHHHHHHHHTT
T ss_pred HHHhc--cccc-----cccccCccEEEChhHHHHHHHHHHHhCchh-----hccCC-eEEEECCCChHHHHHHHHHHHcC
Confidence 64321 1111 111234556665 68999999999988631 24567 99999999999999999999999
Q ss_pred CCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012560 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (461)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~~l~~~ 239 (461)
|+++ .+|+.|||.||++.|+|..+ +.+.+.|++.++|+|+++||||||++++|++|+++++|++++|+++++++.+
T Consensus 197 ~~v~-~~~~~pDg~f~n~~~~~~~~---~~l~~~v~~~~adlgia~DgDaDR~~~vd~~G~~l~gd~i~~lla~~l~~~~ 272 (443)
T 3i3w_A 197 INYV-SIASNPDGLNINVGCGATCV---SNIKKAVKEQKADLGISLDGDADRIIIVDENGQEIDGDGILNILAQYSDICG 272 (443)
T ss_dssp CEEE-ESSCCCCSSCTTTTCSTTCH---HHHHHHHHHHTCSEEEEECTTSCBEEEECTTSCEECHHHHHHHHHHTTTTTT
T ss_pred CEEE-EECCccCCCCCCCCCCCCCH---HHHHHHHHhcCCcEEEEECCCCceEEEECCCCcEeChhHHHHHHHHHHHHhC
Confidence 9998 58999999999988888765 4577889999999999999999999999999999999999999999998876
Q ss_pred CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecCCccCCcHHHHHHHHH
Q 012560 240 PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVKLL 319 (461)
Q Consensus 240 ~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ll 319 (461)
+...||.+++||. .++.+++++|+++++||||||||+++|.+.+. .||||+|||++|+++++.+||++++++++
T Consensus 273 ~~~~vv~tv~ss~-~l~~~~~~~G~~~~~t~~G~k~i~~~m~~~~~-----~~ggE~SG~~~~~~~~~~~Dgi~a~l~~l 346 (443)
T 3i3w_A 273 GTNGIVGTQMTNM-SYENHYRANKIPFIRSKVGDRYVLEDLVKYGY-----KIGGESSGHVINLNFGTTGDGLFTAIQLL 346 (443)
T ss_dssp CCSCEEEETTSCH-HHHHHHHHTTCCEEEESSSTTHHHHHHHHHTC-----CEEECTTSBEEETTTCSSCCHHHHHHHHH
T ss_pred CCCeEEEeecCch-HHHHHHHHCCCeEEEEeChHHHHHHHHhhcCc-----EEEEEeeCcEEEcCcCcCCCHHHHHHHHH
Confidence 6566887777776 55667788999999999999999999998764 69999999999999999999999999998
Q ss_pred HHHHHHHHcCCCCCcccHHHHHhhccCCCccceeeeeecccCCcccCCccchhhHHHHHHHHhhhcCCCCCCCCCcccCc
Q 012560 320 NKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYEG 399 (461)
Q Consensus 320 ~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~dG 399 (461)
+.|+.. + ++|+++++++|.++. ...+++ |++.. .+ .....+.+.+.+.. ..
T Consensus 347 e~l~~~----g----~~Lsel~~~~~~~p~---~~~~v~--~~~~~--~~-~~~~~~~~~i~~~~----------~~--- 397 (443)
T 3i3w_A 347 AIFSQA----D----KPVSEFKLQGELMQQ---TLINVP--LTKKV--AR-EDLQKVASDVNDVE----------KR--- 397 (443)
T ss_dssp HHTTTC----S----SCGGGTSCSSCCCEE---EEEEEE--CSSCC--CH-HHHHTTHHHHHHHH----------HH---
T ss_pred HHHHHc----C----CCHHHHHHhhhhhcc---eEEEEE--cCccc--ch-hhHHHHHHHHHHHH----------Hh---
Confidence 877543 3 459999999998632 223333 43200 00 11233333333210 00
Q ss_pred eEEEecCeEEEEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcC
Q 012560 400 VRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEF 446 (461)
Q Consensus 400 lki~~~~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v~~~ 446 (461)
..++||+|||||||||++|||+||.|++.++++++.+.+.|++.
T Consensus 398 ---~~~~gw~lvR~SgTEP~~rv~~Ea~~~~~~~~l~~~~~~~i~~~ 441 (443)
T 3i3w_A 398 ---LGNRGRVLLRPSGTEPVLRVMVEADDKSLATNEAEYLVEKVKQK 441 (443)
T ss_dssp ---HGGGEEEEEEEETTEEEEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred ---cCCCcEEEEecCCCCceEEEEEEECCHHHHHHHHHHHHHHHHHh
Confidence 13689999999999999999999999999999999999999863
No 8
>3na5_A Phosphoglucomutase; isomerase, metal binding; HET: BTB; 1.70A {Salmonella enterica subsp} PDB: 3olp_A 2fuv_A*
Probab=100.00 E-value=4e-77 Score=627.68 Aligned_cols=415 Identities=20% Similarity=0.231 Sum_probs=327.3
Q ss_pred HHHHHHHHHHhCCCcEEE---eCCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHH
Q 012560 2 LQDAVSRGITGAGLDVVQ---YGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDI 78 (461)
Q Consensus 2 l~~a~~~gL~s~Gi~V~~---~g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ 78 (461)
++++++++|+++|++|++ +|.+|||+++|+++..+. +..++++||||||||||++||||||++++|+++.+++++.
T Consensus 118 ~~~~a~~~L~a~Gi~V~~~~d~g~~PTP~vsfav~~~~~-~~~~~~~GImITASHNP~~~NGiK~~~~~G~~~~~~i~~~ 196 (570)
T 3na5_A 118 AFISVLEVLAANGVDVIVQENNGFTPTPAVSNAILVHNK-KGGPLADGIVITPSHNPPEDGGIKYNPPNGGPADTNVTKV 196 (570)
T ss_dssp HHHHHHHHHHHTTCCEEEEGGGCCCCHHHHHHHHHHHHH-TCSSCCEEEEECCTTCCTTCEEEEEECTTSSCCCHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEeCCCCccChHHHHHHHHHhCC-CccccceEEEEEeCCCChHHCcEEEecCCCCcCCHHHHHH
Confidence 567778999999999994 799999999999973210 0112899999999999999999999999999999888888
Q ss_pred HHHHHhHHhhhhhccccccc---ccCCCcEEEEcchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHH
Q 012560 79 LERAADIYKQFMVEGLTNLE---KQTSTSIKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVL 155 (461)
Q Consensus 79 ie~~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll 155 (461)
||+..+.......++++... ....+.+...++.+.|++++.+.++.+.+ +.+++|||+||+||+++.+++++|
T Consensus 197 Ie~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~Yi~~l~~~i~~~~i----~~~~lkIvvD~~~Gag~~~~~~il 272 (570)
T 3na5_A 197 VEDRANALLAGGLQGVKRISLDAAMASGHVKAVDLVQPFVEGLADIVDMAAI----QKAGLTLGVDPLGGSGIEYWKRIA 272 (570)
T ss_dssp HHHHHHHHHHTTTTTCCCCCHHHHHHTTCEEEECCHHHHHHHGGGTSCHHHH----HHHTCCEEEECTTCTTHHHHHHHH
T ss_pred HHHHHHHhhhcccccccccchhhhccCCeeeccchHHHHHHHHHhhcChhhh----ccCCCEEEEECCCCcHHHHHHHHH
Confidence 87654321000111111000 01235567778999999999887654332 235799999999999999999999
Q ss_pred hhcCCCcccceecCCCCCCCCCCC--------CCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhH
Q 012560 156 EPLGAKTSGSQFLEPDGMFPNHIP--------NPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRL 227 (461)
Q Consensus 156 ~~lg~~v~~~~~~~~d~~f~~~~p--------~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~ 227 (461)
++|||+++ .+++.+||+||+++| +|+.+++++.+.+. +.++|+|+++||||||++++|+ |+++++|++
T Consensus 273 ~~lG~~v~-~v~~~~D~~F~~~~p~~~G~i~~~~~~~~al~~l~~~--~~~aDlgia~DgDaDR~~ivd~-g~~l~gd~~ 348 (570)
T 3na5_A 273 EHYKLNLT-LVNDQVDQTFRFMHLDKDGAIRMDCSSECAMAGLLAL--RDKFDLAFANDPDYDRHGIVTP-AGLMNPNHY 348 (570)
T ss_dssp HHTTCCEE-ESCCCCCTTCTTSBCCTTSSCCCCTTCTTTTHHHHTT--GGGCSEEEEECTTSCBEEEEET-TEECCHHHH
T ss_pred HHcCCeEE-EECCEECCCCCCCCCCcccccCCCCCChHHHHHHHHh--ccCCCEEEEECCCCCeEEEEEC-CEEECHhHH
Confidence 99999987 588999999999765 56677777777654 7899999999999999999999 999999999
Q ss_pred HHHHHHHHHHhCCC---CeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecC
Q 012560 228 IALMSAIVLEEHPG---TTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKE 304 (461)
Q Consensus 228 ~~L~~~~~l~~~~~---~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~ 304 (461)
++|+++++++.+++ ..+|+.+++|+.+++.+++++|+++++||||||||.++|.+.+ ++||||+|||++|+.
T Consensus 349 lal~a~~ll~~~~~~~~~~~v~~t~vSs~~l~~ia~~~G~~~~~t~tG~k~i~~~m~~~~-----~~~ggEeSgg~~f~~ 423 (570)
T 3na5_A 349 LAVAINYLFQHRPLWGKDVAVGKTLVSSAMIDRVVNDLGRKLVEVPVGFKWFVDGLFDGS-----FGFGGEESAGASFLR 423 (570)
T ss_dssp HHHHHHHHTTSCTTSCTTCEEEEETTSCTHHHHHHHHHTCCEEEECSSTHHHHHHHHTTS-----EEEEEETTTEEEECC
T ss_pred HHHHHHHHHHhCCCCCCCceEEEeeCchHHHHHHHHHCCCceEEecccHHHHHHHHHhcC-----CeEEEeccCCccccc
Confidence 99999999987653 3334444555558899999999999999999999999998754 479999999988876
Q ss_pred -----CccCCcHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCCccc-eeeeeecccCCcccCCccchhhHHHHH
Q 012560 305 -----NHWLDDGAYLMVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAV-ELRLKIDQNHSDLKGGSFRDYGEAVLK 378 (461)
Q Consensus 305 -----~~~~~Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~ 378 (461)
+...+||++++++++++++..+ ++|++++++||++|.+. ..|+.++ |++ + +.++|+
T Consensus 424 ~~g~~~~~dkDGi~aal~~le~~a~~g--------~~lsell~~l~~~yg~~~~~r~~~~--~~~-------~-~k~~m~ 485 (570)
T 3na5_A 424 FDGTPWSTDKDGIIMCLLAAEITAVTG--------KNPQEHYNELAARFGAPSYNRLQAS--ATS-------A-QKAALS 485 (570)
T ss_dssp TTSCCSCSSCCHHHHHHHHHHHHHHHS--------SCHHHHHHHHHHHHCCCEEEEEEEE--CCH-------H-HHHHHH
T ss_pred ccccceeecCcHHHHHHHHHHHHHHhC--------CCHHHHHHHHHHHhCCceeEEecCC--CCH-------H-HHHHHH
Confidence 5667899999999999887643 45999999999876433 3566666 765 2 347788
Q ss_pred HHHhhh---cCCCCC---------CCCCcccCceEEEecCeEEEEEecCCCceeEEEEee-CCHHHHHHHHHHHHHHhhc
Q 012560 379 HLENRV---DSDPKL---------QKAPVNYEGVRVSGSGGWFLLRLSLHDPVLPLNIEA-PSREDAVKLGLAVAAATKE 445 (461)
Q Consensus 379 ~l~~~~---~~~~~~---------~~~~~~~dGlki~~~~~w~liRpSgTeP~irvy~Ea-~~~~~a~~l~~~~~~~v~~ 445 (461)
+|.+.. .+..+. +..+..+||+|+.+++||+++|||||||++|||+|+ .+++.++++.++++++|++
T Consensus 486 ~l~~~~~~~~~~~g~~i~~~~~~~~~~~~~iDGlkv~~~dgW~lvRpSgTEP~lriy~Ea~~~~e~l~~l~~~~~~~v~~ 565 (570)
T 3na5_A 486 KLSPEMVSASTLAGDPITARLTAAPGNGASIGGLKVMTDNGWFAARPSGTEDAYKIYCESFLGEEHRKQIEKEAVEIVSE 565 (570)
T ss_dssp TCCGGGCCCSEETTEECCEEEEECTTTCCEEEEEEEECSSEEEEEEECSSSSEEEEEEEESSCHHHHHHHHHHHHHHHHH
T ss_pred HhhhccCcchhhcCcceEEEeecccCCcCCCCeEEEEecCcEEEEEECCCCCeEEEEEEcCCCHHHHHHHHHHHHHHHHH
Confidence 875431 111111 113456899999999999999999999999999999 8999999999999999987
Q ss_pred CCC
Q 012560 446 FPA 448 (461)
Q Consensus 446 ~~~ 448 (461)
+++
T Consensus 566 ~~~ 568 (570)
T 3na5_A 566 VLK 568 (570)
T ss_dssp HHS
T ss_pred HHh
Confidence 653
No 9
>4hjh_A Phosphomannomutase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: SEP G6Q; 2.10A {Brucella melitensis BV}
Probab=100.00 E-value=8.5e-75 Score=601.49 Aligned_cols=393 Identities=20% Similarity=0.195 Sum_probs=311.4
Q ss_pred CHHHHHHHHHHhCCCcEEEeCCCCchhhhhhhccccCcccCCCCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHH
Q 012560 1 MLQDAVSRGITGAGLDVVQYGLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILE 80 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie 80 (461)
||++++++||+++|++|+++|.+|||+++|+++ ++++ +||||||||||++||||||++++|.+..+.. +.++
T Consensus 64 ~~~~a~~~gl~a~Gi~V~~~g~~pTP~l~fav~------~~~~-~GImITASHNP~~~NGiK~~~~~G~~~~~~e-~~I~ 135 (481)
T 4hjh_A 64 DIAALAMGAIEDAGFTPVNCGVLPTPALSYYAM------GAKA-PSIMVTGSHIPDDRNGLKFYRRDGEIDKDDE-AAIS 135 (481)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECCHHHHHHHHH------HTTC-CEEEECCTTSCTTEEEEEEEETTEECCHHHH-HHHH
T ss_pred HHHHHHHHHHHHCCCEEEEeCCcCcHHHHHHHH------hcCC-ceEEEecCCCCCCCCCEEEeCCCCCCCCHHH-HHHH
Confidence 589999999999999999999999999999997 5576 7999999999999999999999997654443 3343
Q ss_pred HHHhHHhhhhhcccccccccCCCcEEEEcchHH-HHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHHHHHHhhcC
Q 012560 81 RAADIYKQFMVEGLTNLEKQTSTSIKRVDYMSV-YTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFAAKVLEPLG 159 (461)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~~~ll~~lg 159 (461)
.... .+.+. ++. ....+. ...+..+. |++++.+.++.. ..+++||||||+||+++.+++++|++||
T Consensus 136 ~~~~---~~~~~-~~~--~~~~g~-~~~d~~~~~Yi~~~~~~~~~~------~~~~lkivvd~~~Ga~~~~~~~~l~~lG 202 (481)
T 4hjh_A 136 AAYR---KLPAI-LAA--RKHVGS-TETDAALQAYADRYAGFLGKG------SLNGLRVGVYQHSSVARDLLMYLLTTLG 202 (481)
T ss_dssp HHHH---TCCC--CCC--CCCCCS-CCCCHHHHHHHHHHHHHHCTT------TTTTCEEEEEEETCTTHHHHHHHHHHTT
T ss_pred HHHh---hhccc-ccc--ccccCc-ccccccHHHHHHHHHHhcCcc------cccCCEEEEECCCChHHHHHHHHHHHcC
Confidence 3221 11100 100 001222 13467888 999999988642 2368999999999999999999999999
Q ss_pred CCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC
Q 012560 160 AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH 239 (461)
Q Consensus 160 ~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~~l~~~ 239 (461)
|+++ .+++ +|.|++++|+|..+++++.+.+.|++.++|+|+++||||||++++|++|+++++|++++|+++++.
T Consensus 203 ~~v~-~l~~--~~~f~~~~~~p~~~e~l~~l~~~v~~~~aDlgia~DgDaDR~~vvd~~G~~i~gd~l~~L~a~~l~--- 276 (481)
T 4hjh_A 203 VEPV-ALGR--SDIFVPVDTEALRPEDIALLAQWGKSDRLDAIVSTDGDADRPLIADEHGQFVRGDLAGAITATWVG--- 276 (481)
T ss_dssp CEEE-EEEE--CSSCCCCCTTSCCHHHHHHHHHHHTSTTCSEEEEECTTSSSEEEECTTSCEECHHHHHHHHHHHTT---
T ss_pred CeEE-EecC--CCCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCceEEEcCCCCEEChHHHHHHHHHHhh---
Confidence 9987 4553 578999888888889999999999999999999999999999999999999999999999999862
Q ss_pred CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeecceeecCC----------ccCC
Q 012560 240 PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGALKEN----------HWLD 309 (461)
Q Consensus 240 ~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~~~~~----------~~~~ 309 (461)
...|+ ++++|+..++.+ ++ ++++|+|||+||.++|.+....|.+++||||+|||++|+++ .+.+
T Consensus 277 -~~~vv-~~v~ss~~l~~~---~~-~~~~t~vG~~~i~~~m~~~~~~g~~~~~GgEeSgg~~~~~~~~~d~~~~~~~~~~ 350 (481)
T 4hjh_A 277 -ADTLV-TPVTSNTALESR---FP-KVLRTRVGSPYVIASMAQVSTGNSGPVIGFEANGGVLLGSTVERNGRSLTALPTR 350 (481)
T ss_dssp -CSEEE-EETTSCTTHHHH---CS-CEEEECSSHHHHHHHHHHCC----CCEEEECTTCCEEECSCEEETTEEECCEEEE
T ss_pred -cCcEE-EEEcChHHHHHh---cC-ceEEeccchHHHHHHHHHhhccCCCeEEEEeCCCCEEECchhcccccccccCCCc
Confidence 23455 445554454544 55 99999999999999999865444567899999999998764 3479
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCCccceeeeeecccCCcccCCccchhhHHHHHHHHhhh-----
Q 012560 310 DGAYLMVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRV----- 384 (461)
Q Consensus 310 Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~----- 384 (461)
||+++++++++.|+..+ ++|++++++||++|.+++ ++ .. |+| +.+.++|++|.+..
T Consensus 351 Dgi~a~l~~le~~a~~g--------~~Lsell~~l~~~~~~~~-~~-~~--~~~-------~~~~~~m~~l~~~~~~~~~ 411 (481)
T 4hjh_A 351 DALLPILACLATVHEKK--------TPLSTIARSYGFRVALSD-RL-QN--IPQ-------EASTAFLALLEDADKRASL 411 (481)
T ss_dssp ESHHHHHHHHHHHHHHT--------CCHHHHHHTTCCCEEEEE-EE-ES--CCH-------HHHHHHHHHTTSHHHHHHH
T ss_pred cHHHHHHHHHHHHHHcC--------CCHHHHHHHHHHHhCCce-ee-cC--CCH-------HHHHHHHHHHHhcCChHHH
Confidence 99999999999887653 459999999999865432 21 12 676 45789999997652
Q ss_pred cCCCCCCCCCcccCceEEEecC-eEEEEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhc
Q 012560 385 DSDPKLQKAPVNYEGVRVSGSG-GWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKE 445 (461)
Q Consensus 385 ~~~~~~~~~~~~~dGlki~~~~-~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v~~ 445 (461)
....+....+..+||+|+.+++ +|++||||||||++|||+||.|++.++++++.+.+.|++
T Consensus 412 ~~~~g~~~~v~~~DGlri~~~dg~wvlvRpSgTEP~lrvy~Ea~s~e~~~~l~~~~~~~i~~ 473 (481)
T 4hjh_A 412 FPAGDAIVRVETIDGVKLFFQSGNAVHYRASGNAPELRCYVESSDDTQAAKLQALGLEIARK 473 (481)
T ss_dssp SCTTSCEEEEECSSSEEEEETTSCEEEEEECSSSSEEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred HhhcCccccccCCCeEEEEecCCcEEEEecCCCCceEEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence 1111112246778999999865 599999999999999999999999999999999999987
No 10
>3pmg_A Alpha-D-glucose-1,6-bisphosphate; phosphoglucomutase, phosphotransferase; HET: SEP; 2.40A {Oryctolagus cuniculus} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1c4g_A* 1jdy_A* 1lxt_A 1vkl_A* 1c47_A*
Probab=100.00 E-value=4.3e-75 Score=611.81 Aligned_cols=428 Identities=21% Similarity=0.220 Sum_probs=336.7
Q ss_pred CHHHHHHHHHHhCCCcEEEe---CCCCchhhhhhhccccCcccCCCCeEEEEcCCCCC---CCCCeeeEEcCCCCCCCHH
Q 012560 1 MLQDAVSRGITGAGLDVVQY---GLASTPAMFNSTLTEGDAFFCPVDGAIMITASHLP---YNRNGLKFFTNAGGLGKPD 74 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~---g~~~tP~~~~a~~~~~~~~~~~a~gGI~ITaSHNP---~~~nGiK~~~~~G~~~~~~ 74 (461)
+++++++++|+++|++|+++ |.+|||+++|+++ ++++++|||||||||| ++||||||++++|++++++
T Consensus 68 ~~~~~~a~~l~a~Gv~V~~~~~~g~~pTP~vs~av~------~~~a~gGImITASHNP~~~~~~nGiK~~~~~G~~~~~~ 141 (561)
T 3pmg_A 68 EAIQLIVRIAAANGIGRLVIGQNGILSTPAVSCIIR------KIKAIGGIILTASHNPGGPNGDFGIKFNISNGGPAPEA 141 (561)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEEEECCHHHHHHHHH------HHTCSEEEEECCTTSCCSTTSEEEEEEEETTSSBCCHH
T ss_pred HHHHHHHHHHHHCCCEEEEecCCCccCHHHHHHHHH------HhcCCeEEEEEeCCCCCCCCCcceEEEEeCCCCcCCHH
Confidence 47899999999999999999 8999999999997 5688999999999999 5589999999999999988
Q ss_pred HHHHHHHHHhHHhhhh-----hcccccccc---c-----CCCcEEEEcchHHHHHHHHHHHHhhcCCCC-CCCCCcEEEE
Q 012560 75 IKDILERAADIYKQFM-----VEGLTNLEK---Q-----TSTSIKRVDYMSVYTSDLVKAVRRAAGDIE-KPLEGFHIVV 140 (461)
Q Consensus 75 ~~~~ie~~~~~~~~~~-----~~~~~~~~~---~-----~~~~i~~~~~~~~Y~~~l~~~i~~~~~~~~-~~~~~lkVvv 140 (461)
+++.|+...+..+.+. +.++....+ . ..+.+...+..+.|++.+.+.++.+.+... ...+++|||+
T Consensus 142 ~~~~Ie~~~~~i~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~d~~~~Yi~~l~~~~d~~~i~~~~~~~~~lkIvv 221 (561)
T 3pmg_A 142 ITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENKFKPFTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRI 221 (561)
T ss_dssp HHHHHHHHHHHCCEEEECTTCCCCTTSCEEEEECCTTCSSCEEEEEECSSHHHHHHHHTTSCHHHHHHHHHSTTCCCEEE
T ss_pred HHHHHHHHHHhhhhhccccccccchhhhccccccccccccCCceEecChHHHHHHHHHHhcChHHhhhhhccCCCcEEEE
Confidence 8887776543221110 001000000 0 112345668889999999887764432100 0125799999
Q ss_pred eCCCCCchHHHHHHH-hhcCCCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCC
Q 012560 141 DAGNGAGGFFAAKVL-EPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTG 219 (461)
Q Consensus 141 d~~~G~~~~~~~~ll-~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G 219 (461)
||+||+++.+++++| ++|||+++..+|+.|||.||+++|+|+.+ .+..+.+.|++.++|+|+++||||||++++|++|
T Consensus 222 D~~~Ga~~~~~~~il~~~lG~~v~~~v~~~pd~~F~~~~P~P~~~-~~~~L~~~v~~~~aDlgia~DgDaDR~~ivd~~G 300 (561)
T 3pmg_A 222 DAMHGVVGPYVKKILCEELGAPANSAVNCVPLEDFGGHHPDPNLT-YAADLVETMKSGEHDFGAAFDGDGDRNMILGKHG 300 (561)
T ss_dssp ECTTSTTHHHHHHHHTTTTCCCGGGEESCSCCTTGGGSCCCCSTT-TTHHHHHHHHTSCCSEEEEECTTSSCEEEEEGGG
T ss_pred ECCCCchHHHHHHHHHHHcCCCeEEEECCEECCCCCCCCCCCChH-HHHHHHHHHHhcCCCEEEEEcCCCCeEEEEeCCC
Confidence 999999999999976 99999986347899999999999999864 4578889999999999999999999999999999
Q ss_pred ccccchhHHHHHHHHHH-----HhCCCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEe
Q 012560 220 HELNRNRLIALMSAIVL-----EEHPGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAI 294 (461)
Q Consensus 220 ~~l~~d~~~~L~~~~~l-----~~~~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~ 294 (461)
++++++++++|++++++ +..+...||.+.+|| .+++.+++++|+++++||||||||++.|.+.+ ..|||
T Consensus 301 ~~v~~~~~lalla~~l~~~~~~~~~~~~~vv~tv~Ss-~~ld~va~~~G~~v~~t~vG~k~i~~~m~~~~-----~~~gG 374 (561)
T 3pmg_A 301 FFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTS-GALDRVANATKIALYETPTGWKFFGNLMDASK-----LSLCG 374 (561)
T ss_dssp CBCCHHHHHHHHHHTGGGSHHHHHHCCCCEEEETTSC-THHHHHHHTSSSCEEEECSSHHHHHHHHHTTC-----CSEEE
T ss_pred cEECccHHHHHHHHHHHhhhhhHhcCCCeEEEEechH-HHHHHHHHHcCCCEEEEeccHHHHHHHhccCC-----eEEEE
Confidence 99999999999999874 333334577555555 57789999999999999999999999998754 46999
Q ss_pred eeecceeecCCccCCcHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCCc-cceeeeeecccCCcccCCccchhh
Q 012560 295 ETSGHGALKENHWLDDGAYLMVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPGF-AVELRLKIDQNHSDLKGGSFRDYG 373 (461)
Q Consensus 295 E~sG~~~~~~~~~~~Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 373 (461)
|||||+ ++++...+||++++++++++|+..+ ++|+|++++||++|. ....|.++.. |+| +.+
T Consensus 375 EeS~G~-~~~~~~~kDGi~aal~~le~la~~g--------~~lsell~~l~~~yG~~~~~r~d~~~-~~~-------~~~ 437 (561)
T 3pmg_A 375 EESFGT-GSDHIREKDGLWAVLAWLSILATRK--------QSVEDILKDHWHKFGRNFFTRYDYEE-VEA-------EGA 437 (561)
T ss_dssp ETTTEE-EETTSSSCCHHHHHHHHHHHHHHHC--------SCHHHHHHHHHHHHCEEEEEEEEEEE-ECH-------HHH
T ss_pred EecCCc-CCCeeecCCHHHHHHHHHHHHHHhC--------CCHHHHHHHHHHHhCccccccccccc-CCH-------HHH
Confidence 999885 6888999999999999999887643 459999999998763 2224444443 777 568
Q ss_pred HHHHHHHHhhhc--CCCC-----------------------CCCCCcccCceEEEec-CeEEEEEecCCC---ceeEEEE
Q 012560 374 EAVLKHLENRVD--SDPK-----------------------LQKAPVNYEGVRVSGS-GGWFLLRLSLHD---PVLPLNI 424 (461)
Q Consensus 374 ~~v~~~l~~~~~--~~~~-----------------------~~~~~~~~dGlki~~~-~~w~liRpSgTe---P~irvy~ 424 (461)
+++|++|++... +..| ....++.+||+|+.++ ++|++||||||| |++|||+
T Consensus 438 ~~vm~~L~~~~~~~~~~g~~~~~~~~~~~v~~~~~f~~~dpvd~~v~~~dGvri~~~dgswvlvRpSGte~~~P~lRvY~ 517 (561)
T 3pmg_A 438 TKMMKDLEALMFDRSFVGKQFSANDKVYTVEKADNFEYHDPVDGSVSKNQGLRLIFADGSRIIFRLSGTGSAGATIRLYI 517 (561)
T ss_dssp HHHHHHHHHHHHSTTSTTCEEEETTEEEEEEEEEECCEECTTTCCEECCCCEEEEETTSCEEEEEEEECSSSCEEEEEEE
T ss_pred HHHHHHHHhcCCcccccccccccccccceeeecccccccCcccCccccCceEEEEeCCCCEEEEecCCCCCCCceEEEEE
Confidence 999999976542 1101 0124667899999985 579999999999 9999999
Q ss_pred eeCCHHHHHHHHHHHHHHhhcCC--CCCchHHHHHHh
Q 012560 425 EAPSREDAVKLGLAVAAATKEFP--ALDTSALDKFVQ 459 (461)
Q Consensus 425 Ea~~~~~a~~l~~~~~~~v~~~~--~~~~~~~~~~~~ 459 (461)
|+.++ .++++....++.++.++ ++++++|++|+-
T Consensus 518 Ea~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (561)
T 3pmg_A 518 DSYEK-DNAKINQDPQVMLAPLISIALKVSQLQERTG 553 (561)
T ss_dssp EEEEC-CTTTTTSCHHHHHHHHHHHHHHHHTHHHHHC
T ss_pred EecCC-CHHHHHHHHHHHHHHHHHHHHHHHhHHHHhC
Confidence 99775 45677777777777765 688999999974
No 11
>2z0f_A Putative phosphoglucomutase; isomerase, magnesium, metal-binding, structural genomics; 2.52A {Thermus thermophilus}
Probab=100.00 E-value=5.1e-74 Score=602.43 Aligned_cols=409 Identities=20% Similarity=0.199 Sum_probs=299.0
Q ss_pred CHHHHHHHHHHhCCCcEEEe---CCCCchhhhhhhccccCcccCC-----CCeEEEEcCCCCCCCCCeeeEEcCCCCCCC
Q 012560 1 MLQDAVSRGITGAGLDVVQY---GLASTPAMFNSTLTEGDAFFCP-----VDGAIMITASHLPYNRNGLKFFTNAGGLGK 72 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~---g~~~tP~~~~a~~~~~~~~~~~-----a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~ 72 (461)
++++++++||+++|++|+++ |.+|||+++|+++ +++ |++||||||||||++||||||++++|.++.
T Consensus 77 ~~~~~~~~gl~a~Gi~V~~~~~~G~~pTP~l~~av~------~~~~~~~~a~~GImITASHNP~~~NGiK~~~~~G~~~~ 150 (524)
T 2z0f_A 77 PAWATALSVFAAHGIEVRVEADGDYTPTPLVSLAIL------EHNAHHEAKADGVLLTPSHNPPEDGGFKYNPPTGGPAN 150 (524)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSSSCCCHHHHHHHHH------HHHTTCSSCCEEEEECC--CCTTCEEEEEECTTSSCCC
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCCccCcHHHHHHHH------HhCCCccccceEEEEcCCCCCchhCCEEEECCCCCcCC
Confidence 47889999999999999985 8999999999997 445 699999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHhhhhhcccccccc-cCCCcEEEEcchHHHHHHHHHHHHhhcCCCCCCCCCcEEEEeCCCCCchHHH
Q 012560 73 PDIKDILERAADIYKQFMVEGLTNLEK-QTSTSIKRVDYMSVYTSDLVKAVRRAAGDIEKPLEGFHIVVDAGNGAGGFFA 151 (461)
Q Consensus 73 ~~~~~~ie~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~Y~~~l~~~i~~~~~~~~~~~~~lkVvvd~~~G~~~~~~ 151 (461)
+++++.||...+......+++++.... ...+.+...++.+.|++++.+.++.+.+ +.+++|||+||+||+++.++
T Consensus 151 ~~~~~~Ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~Y~~~l~~~~~~~~i----~~~~lkivvd~~nG~~~~~~ 226 (524)
T 2z0f_A 151 ARITRAIEERANALLQEGLKGVKRLPLREALARAKPFDYAGLYVEKVAEAVDLEAI----RASGLRIGVDPLGGASLRVW 226 (524)
T ss_dssp HHHHHHHHHHHHHHHHTTTTTCCCCCHHHHHHHCEEECHHHHHHHHGGGTSCHHHH----HHSCCCEEEECTTSTTHHHH
T ss_pred HHHHHHHHHHHHhhcccccccccccChhhhcccccccchHHHHHHHHHHhcChhhh----ccCCCeEEEeCCCCchHHHH
Confidence 888877776432110001111110000 0012244568889999998876643321 23589999999999999999
Q ss_pred HHHHhhcCCCcccceecCCCCCCCCCC--------CCCCchHHHHHHHHHHHhcCCcEEEeeCCCCceeEEEcCCCcccc
Q 012560 152 AKVLEPLGAKTSGSQFLEPDGMFPNHI--------PNPEDKTAMKAIIQAVLDNKADLGIIFDTDVDRSAAVDSTGHELN 223 (461)
Q Consensus 152 ~~ll~~lg~~v~~~~~~~~d~~f~~~~--------p~P~~~~~l~~l~~~v~~~~adlgia~D~DgDR~~~vd~~G~~l~ 223 (461)
+++|++|||+++ .+++.+||+||+++ |+|+.++++..+.. ++.++|+|+++||||||++++|++ ++++
T Consensus 227 ~~ll~~lG~~v~-~v~~~~d~~f~~~~~~~~g~~~p~p~~~~~l~~~~~--~~~~aDlgia~DgDaDR~~vvd~~-~~l~ 302 (524)
T 2z0f_A 227 ERLAESHGLPLE-VVNPTLDPTFRFMPKDHDGKIRMDCSSPYAMAGLLA--LKDRFDLAIGNDPDADRHGIVTPR-GLMN 302 (524)
T ss_dssp HHHHHHHTCCEE-EC-------------------------------CCC--CCCCSSEEEEECTTSCSEEEEETT-EECC
T ss_pred HHHHHHcCCcEE-EEcCccCCCCCCCCCCCccccCCCCCChhHHHHHHH--hhcCCCEEEEeCCccccceEEecC-ceec
Confidence 999999999987 58899999999754 56666655443321 588999999999999999999999 7999
Q ss_pred chhHHHHHHHHHHHhC--CCCeEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHHHHhcccCCcceeEeeeeccee
Q 012560 224 RNRLIALMSAIVLEEH--PGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEAIRLNSIGEESHLAIETSGHGA 301 (461)
Q Consensus 224 ~d~~~~L~~~~~l~~~--~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~~~~~~~g~~~~~g~E~sG~~~ 301 (461)
+|++++|+++++++.. ++..++.+.+||. +++.+++++|+++++|+||||||.++|.+.+ +.||||+|||++
T Consensus 303 gd~i~alla~~l~~~~~~~~~~vv~t~vss~-~l~~ia~~~G~~~~~t~tG~k~i~~~m~~~~-----~~~ggEeSgg~~ 376 (524)
T 2z0f_A 303 PNHYLAAALHHLYTTRSWPGAKVGKTAVTSA-LLDRVAQALGREVYETPVGFKHFVAGLLEGW-----LGFAGEESAGAS 376 (524)
T ss_dssp HHHHHHHHHHHHHTTCCCTTCEEEEETTSCT-HHHHHHHHTTCCEEEECSSTHHHHHHHHHSS-----EEEEEETTTEEE
T ss_pred hhHHHHHHHHHHHHhcCCCCCeEEEecccHH-HHHHHHHHhCceEEEcCCcHHHHHHHHhhCC-----cEEEEEccCcEE
Confidence 9999999999998865 4456776766665 7788999999999999999999999998754 579999999999
Q ss_pred ecCC-----ccCCcHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCCccc-eeeeeecccCCcccCCccchhhHH
Q 012560 302 LKEN-----HWLDDGAYLMVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPGFAV-ELRLKIDQNHSDLKGGSFRDYGEA 375 (461)
Q Consensus 302 ~~~~-----~~~~Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 375 (461)
|+++ ...+||++++++++++|+.. + ++|++++++||+.|.+. +.+..++ |++ + ...
T Consensus 377 ~~~~~~~~~~~~~Dgi~aal~~le~~a~~----g----~~L~ell~~l~~~~g~~~~~~~~~~--~~~-------~-~k~ 438 (524)
T 2z0f_A 377 FLRFDGRPFSTDKDGILMGLLAAELMAKR----G----QAPDALYEALAEKLGRPYYARKDLP--VSP-------E-AKA 438 (524)
T ss_dssp ECCTTSCCSCSSCCHHHHHHHHHHHHHHH----S----SCHHHHHHHHHHHHCCCEEEEEEEE--CCH-------H-HHH
T ss_pred ECCCCcccccccchHHHHHHHHHHHHHHh----C----CCHHHHHHHHHHHhCcceeeeeccc--chH-------H-HHH
Confidence 9886 77899999999999988764 3 45999999999865432 4455555 665 2 234
Q ss_pred HHHHHHhhh---cCCCCCCC-C--------CcccCceEEEecCeEEEEEecCCCceeEEEEee-CCHHHHHHHHHHHHHH
Q 012560 376 VLKHLENRV---DSDPKLQK-A--------PVNYEGVRVSGSGGWFLLRLSLHDPVLPLNIEA-PSREDAVKLGLAVAAA 442 (461)
Q Consensus 376 v~~~l~~~~---~~~~~~~~-~--------~~~~dGlki~~~~~w~liRpSgTeP~irvy~Ea-~~~~~a~~l~~~~~~~ 442 (461)
+|+++.+.. .+..+..+ . ...+||+|+.+++||++||||||||++|||+|+ .+++.++++.+.+.+.
T Consensus 439 ~~~~l~~~~~~~~~~~~~~i~~~~~~~~g~~~~~dGlr~~~~~gwvlvRpSgTEP~irvy~Ea~~~~~~~~~~~~~~~~~ 518 (524)
T 2z0f_A 439 RLARLSAKEVHPSTLAGEPVLQVLDRATGNGEPLGGIKVVAANAWFAVRPSGTEDVAKVYAESFLGEAHLERVLEEATAL 518 (524)
T ss_dssp HHTTCCTTTSCCSEETTEECCEEEEECTTTCCEEEEEEEECSSEEEEEEECSSSSEEEEEEEESSCHHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCChHHhCCceeEEEEeccCCCCCCCCeEEEEECCeEEEEEcCCCCCEEEEEEEEeCCHHHHHHHHHHHHHH
Confidence 676664320 00011100 1 133899999998899999999999999999999 6888899998888888
Q ss_pred hhcCC
Q 012560 443 TKEFP 447 (461)
Q Consensus 443 v~~~~ 447 (461)
++.++
T Consensus 519 ~~~~~ 523 (524)
T 2z0f_A 519 LHKAL 523 (524)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 87543
No 12
>1kfi_A Phosphoglucomutase 1; parafusin, phosphoprotein PP63, exocytosis, isomerase; 2.40A {Paramecium tetraurelia} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1kfq_A
Probab=100.00 E-value=8.8e-73 Score=597.60 Aligned_cols=427 Identities=19% Similarity=0.173 Sum_probs=323.5
Q ss_pred CHHHHHHHHHHhCCCcEEEe---CCCCchhhhhhhccccCcccC-----CCCeEEEEcCCCCCC--C--CCeeeEEcCCC
Q 012560 1 MLQDAVSRGITGAGLDVVQY---GLASTPAMFNSTLTEGDAFFC-----PVDGAIMITASHLPY--N--RNGLKFFTNAG 68 (461)
Q Consensus 1 ~l~~a~~~gL~s~Gi~V~~~---g~~~tP~~~~a~~~~~~~~~~-----~a~gGI~ITaSHNP~--~--~nGiK~~~~~G 68 (461)
+|+++++++|+++|++|+++ |.+|||+++|+++ ++ +|+|||||||||||+ + |||||||+++|
T Consensus 73 ~~a~~~a~~l~a~Gi~V~~~~~~G~~pTP~l~fav~------~~n~~~~~a~~GImITASHNP~~~~~~~NGiK~~~~~G 146 (572)
T 1kfi_A 73 QAIFSIIRLAYANDISEVHVGQAGLMSTPASSHYIR------KVNEEVGNCIGGIILTASHNPGGKEHGDFGIKFNVRTG 146 (572)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEGGGCBCHHHHHHHHH------HHHHHSCCEEEEEEECCTTSCCSTTTCEEEEEEECTTS
T ss_pred HHHHHHHHHHHHCCCEEEEecCCCCCChHHHHHHHH------HhccccCCcceEEEEeCCCCCCCcCcccCcEEEecCCC
Confidence 48999999999999999999 9999999999997 56 789999999999994 4 99999999999
Q ss_pred CCCCHHHHHHHHHHHhHHhhhhhcccc---cccccCC--------------CcEEEEcchHHHHHHHHHHHHhhcCCCCC
Q 012560 69 GLGKPDIKDILERAADIYKQFMVEGLT---NLEKQTS--------------TSIKRVDYMSVYTSDLVKAVRRAAGDIEK 131 (461)
Q Consensus 69 ~~~~~~~~~~ie~~~~~~~~~~~~~~~---~~~~~~~--------------~~i~~~~~~~~Y~~~l~~~i~~~~~~~~~ 131 (461)
.++++++++.|+........+...+.. ....... +.+...+..+.|++++.+.++.+.+....
T Consensus 147 ~~~~~~~~~~Ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~Yi~~l~~~~~~~~i~~~l 226 (572)
T 1kfi_A 147 APAPEDFTDQIYTHTTKIKEYLTVDYEFEKHINLDQIGVYKFEGTRLEKSHFEVKVVDTVQDYTQLMQKLFDFDLLKGLF 226 (572)
T ss_dssp SBCCHHHHHHHHHHHTTCCEEEECCCCGGGTCCTTSCEEEEEEBCCTTCCEEEEEEECSSHHHHHHHHHHSCHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHhhhcccccccccccccChhhccccccccccccccccceeecCcHHHHHHHHHHhcCHHHHhhhc
Confidence 999988887777654221111000000 0000011 12344578999999999887543221000
Q ss_pred CCCCcEEEEeCCCCCchHHHHHHHh-hcCCC-cccceecCCCCCCCCCCCCCCchHHHHHHHHHH-------HhcCCcEE
Q 012560 132 PLEGFHIVVDAGNGAGGFFAAKVLE-PLGAK-TSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAV-------LDNKADLG 202 (461)
Q Consensus 132 ~~~~lkVvvd~~~G~~~~~~~~ll~-~lg~~-v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v-------~~~~adlg 202 (461)
..+++|||+||+||+++.+++++|+ +|||+ ++ .+|+.|||+||++.|+|+. +.+..+.+.| ++.++|+|
T Consensus 227 ~~~~lkIvvd~~nG~~~~~~~~il~~~lG~~~v~-~l~~~pD~~Fp~~~p~P~~-~~~~~L~~~v~~~~~~a~~~~aDlg 304 (572)
T 1kfi_A 227 SNKDFSFRFDGMHGVAGPYAKHIFGTLLGCSKES-LLNCDPSEDFGGGHPDPNL-TYAHDLVELLDIHKKKDVGTVPQFG 304 (572)
T ss_dssp TCTTCCEEEECTTSTHHHHHHHHHTTTTCCCGGG-EESCSCCTTGGGSCCCCST-TTTHHHHHHTTTTCCSCGGGSCSEE
T ss_pred ccCCCEEEEeCCCcchHHHHHHHHHHhCCCCeEE-EEecccCCCCCCCCCCCCc-hhHHHHHHHHhhhhccccccCCCeE
Confidence 1258999999999999999999998 99996 87 4799999999998888885 5578888889 89999999
Q ss_pred EeeCCCCceeEEEcCCCccccchhHHHHHHHHHHHhC-CCC-eEEEeccCChhHHHHHHHHcCCeEEEEecchHHHHHHH
Q 012560 203 IIFDTDVDRSAAVDSTGHELNRNRLIALMSAIVLEEH-PGT-TIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYKNVIDEA 280 (461)
Q Consensus 203 ia~D~DgDR~~~vd~~G~~l~~d~~~~L~~~~~l~~~-~~~-~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k~i~~~~ 280 (461)
+++||||||++++| +|++++++++++|++.+++... ++. .||.+.+||. +++.+++++|+++++|+||||||.+.|
T Consensus 305 iA~DgDaDR~~vvd-~G~~v~~~~~l~ll~~~~l~~~~~g~~~Vv~~~~ss~-~l~~ia~~~G~~~~~t~tG~k~i~~~m 382 (572)
T 1kfi_A 305 AACDGDADRNMILG-RQFFVTPSDSLAVIAANANLIFKNGLLGAARSMPTSG-ALDKVAAKNGIKLFETPTGWKFFGNLM 382 (572)
T ss_dssp EEECTTSCBEEEEE-TTEEECHHHHHHHHHHTHHHHSTTCCCCEEEETTSCT-HHHHHHHHHTCCEEEECSSTHHHHHHH
T ss_pred EeeCCCCceeEEee-CCeEecccHhHHHHHHHHHHHhcCCCcEEEEEeCchH-HHHHHHHHcCCeEEEeCCcHHHHHHHH
Confidence 99999999999999 8999999999999999988753 233 4776666666 667888999999999999999999999
Q ss_pred HHhcccCCcceeEeeeecceeecCCccCCcHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHhhccCCCc-cceeeeeecc
Q 012560 281 IRLNSIGEESHLAIETSGHGALKENHWLDDGAYLMVKLLNKLASARAAGRGGGSKVLTDLVDGLEEPGF-AVELRLKIDQ 359 (461)
Q Consensus 281 ~~~~~~g~~~~~g~E~sG~~~~~~~~~~~Dgi~aa~~ll~~l~~~~~~~~~~~~~~Ls~ll~~lp~~~~-~~~~~~~~~~ 359 (461)
.+.+ ..||||+|||+ ++++.+.+||++++++++++|+...+ +++ +.++|+|++++|++.|. +...+..+..
T Consensus 383 ~~~~-----~~~ggEeSgg~-~~~~~~~kDgi~a~l~~le~la~~~~-~g~-~~~tL~ell~~l~~~yp~~~~~~~~~~~ 454 (572)
T 1kfi_A 383 DAGL-----INLCGEESFGT-GSNHIREKDGIWAVLAWLTILAHKNK-NTD-HFVTVEEIVTQYWQQFGRNYYSRYDYEQ 454 (572)
T ss_dssp HTTS-----CSEEEETTTEE-EETTSSSCCHHHHHHHHHHHHHHHTS-SCS-SCCCHHHHHHHHHHHHCEEEEEEEEEEE
T ss_pred hcCC-----cEEEEeccCCc-cccccCCCccHHHHHHHHHHHHHhcc-ccC-CCCCHHHHHHHHHHHcCceeEEeeeeec
Confidence 8744 46999999996 68899999999999999998876542 121 00259999999855432 1223343332
Q ss_pred cCCcccCCccchhhHHHHHHHHhhhcC------CC---------CCCCCCcccCceEEEecC-eEEEEEecCCCc---ee
Q 012560 360 NHSDLKGGSFRDYGEAVLKHLENRVDS------DP---------KLQKAPVNYEGVRVSGSG-GWFLLRLSLHDP---VL 420 (461)
Q Consensus 360 ~~~~~~~~~~~~~~~~v~~~l~~~~~~------~~---------~~~~~~~~~dGlki~~~~-~w~liRpSgTeP---~i 420 (461)
|++ +.+.++|++|.+...+ .. .....+..+||+|+.+++ +|++|||||||| +|
T Consensus 455 -~~~-------~~~~~im~~l~~~~~~~g~~~~v~~~~d~~~~~~~~~~i~~~dglr~~~~dg~wvlvRpSGTEP~~~~i 526 (572)
T 1kfi_A 455 -VDS-------AGANKMMEHLKTKFQYFEQLKQGNKADIYDYVDPVDQSVSKNQGVRFVFGDGSRIIFRLSGTGSVGATI 526 (572)
T ss_dssp -ECH-------HHHHHHHHHHHTTHHHHHTTSTTCEEEECCEECTTTCCEECCCCEEEECTTSCEEEEEECSSCSSSEEE
T ss_pred -CCH-------HHHHHHHHHHHhhhhhhCCceeEEEeecccccCcccCCCCCCCeEEEEECCCeEEEEECCCCCCCCceE
Confidence 554 4578999999774211 00 011245678999999866 599999999999 99
Q ss_pred EEEEeeCCH----HHHHHHHHHHHHHhhcCCCCCchHHHHHH
Q 012560 421 PLNIEAPSR----EDAVKLGLAVAAATKEFPALDTSALDKFV 458 (461)
Q Consensus 421 rvy~Ea~~~----~~a~~l~~~~~~~v~~~~~~~~~~~~~~~ 458 (461)
|||+|+.++ +.+++.+..+.+.+ +.+++|++|+
T Consensus 527 rvy~Ea~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 563 (572)
T 1kfi_A 527 RIYFEQFEQQQIQHETATALANIIKLG-----LEISDIAQFT 563 (572)
T ss_dssp EEEEEEEESSCCCSCHHHHHHHHHHHH-----HHHHCHHHHH
T ss_pred EEEEEecCcchhHHHHHHHHHHHHHHH-----HHHhChHHHh
Confidence 999999644 33444444444444 4677888886
No 13
>2dka_A Phosphoacetylglucosamine mutase; isomerase; 1.93A {Candida albicans} PDB: 2dkc_A* 2dkd_A*
Probab=100.00 E-value=3.3e-61 Score=505.93 Aligned_cols=375 Identities=16% Similarity=0.129 Sum_probs=269.4
Q ss_pred cCC-CCeEEEEcCCCCCCCCCeeeEEcCCCCCCCHHHHHHHHHHHhH-------------------Hhhhhhccccc---
Q 012560 40 FCP-VDGAIMITASHLPYNRNGLKFFTNAGGLGKPDIKDILERAADI-------------------YKQFMVEGLTN--- 96 (461)
Q Consensus 40 ~~~-a~gGI~ITaSHNP~~~nGiK~~~~~G~~~~~~~~~~ie~~~~~-------------------~~~~~~~~~~~--- 96 (461)
+++ +++||||||||||++||||||++++|.+++++++..++...+. .+.+..++++.
T Consensus 53 ~~~~~~~GImITASHNP~~dNGiK~~~~~G~~l~~~~e~~~~~~an~~~~~~~~~~~~~~~I~~~i~~~~~~~~~~~~~~ 132 (544)
T 2dka_A 53 YLQGKTVGVMITASHNPPEDNGVKVVDPLGSMLESSWEKYATDLANASPSPSNDSEGEKNSLVEVIKNLVSDLKIDLSIP 132 (544)
T ss_dssp HTTTCEEEEEECCC-CCTTEEEEEEECTTSSBCCGGGHHHHHHHHHSBSCC------CTTBHHHHHHHHHHHTTCCTTSC
T ss_pred hcCCcCceEEEeCCCCCcccCceeeecCCCCcCCHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHhhhcCCcccC
Confidence 567 8999999999999999999999999999988877332222110 00111112210
Q ss_pred -------ccccC--------------C-Cc-EEEE---------------------c-chHHHHHHHHHHHHhhcCCCCC
Q 012560 97 -------LEKQT--------------S-TS-IKRV---------------------D-YMSVYTSDLVKAVRRAAGDIEK 131 (461)
Q Consensus 97 -------~~~~~--------------~-~~-i~~~---------------------~-~~~~Y~~~l~~~i~~~~~~~~~ 131 (461)
..|.. . |. +..+ + ..+.|++++.+.+........+
T Consensus 133 ~~v~vg~d~r~s~~~l~~al~~gl~~~~G~~v~~~G~~ttP~l~~~v~~~~~~~~g~~~~~~Y~~~l~~~~~~~~~~~~~ 212 (544)
T 2dka_A 133 ANVVIARDSRESSPALSMATIDGFQSVPNTKYQDFGLFTTPELHYVTRTLNDPDFGKPTEDGYYSKLAKSFQEIYTICES 212 (544)
T ss_dssp EEEEEEECSCTTHHHHHHHHHHHHHTSSSEEEEEEEECCHHHHHHHHHHHHCGGGCCSSHHHHHHHHHHHHHHHHTC---
T ss_pred ceEEeccCCCCCCHHHHHHHHhhhhhhcCCeEEEecccccchheeeeeeccccccCCccHHHHHHHHHHHHHHHHhhhhc
Confidence 00111 1 22 3333 4 6789999999987531110011
Q ss_pred CCCCcEEEEeCCCCCchHHHHHH-Hhhc--CCCcccceecCC-CCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCC
Q 012560 132 PLEGFHIVVDAGNGAGGFFAAKV-LEPL--GAKTSGSQFLEP-DGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDT 207 (461)
Q Consensus 132 ~~~~lkVvvd~~~G~~~~~~~~l-l~~l--g~~v~~~~~~~~-d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~ 207 (461)
+.+++|||+||+||+++.+++++ |++| ||+++ .+|+.| ||.|+++.|+|+.+..+..+.+.+....+|+|+++||
T Consensus 213 ~~~~lkIvvD~~nGag~~~~~~i~l~~L~~G~~v~-~ln~~~dd~~~~n~~~~~~~~~~~~~~~~~~~~~~aDlGiA~Dg 291 (544)
T 2dka_A 213 NNEKIDITIDAANGVGAPKIQELLEKYLHKEISFT-VVNGDYKQPNLLNFDCGADYVKTNQKLPKNVKPVNNKLYASFDG 291 (544)
T ss_dssp --CCEEEEEECTTSTHHHHHHHHHHHHSTTTEEEE-EESCCTTCGGGTTSSCSHHHHHHHCSCCTTCCCCBTCCEEEECT
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHHhcCCceEE-EEcCcCCCCCcCCCCCCccchhhhhhhhhhhhcccccEEEEECC
Confidence 22479999999999999999999 9999 89988 589999 7999999998866554444433445577899999999
Q ss_pred CCceeEEE--cCCC--ccccchhHHHHHHHHHHHhCC---------CCeEEEeccCChhHHHHHHHHcCCeEEEEecchH
Q 012560 208 DVDRSAAV--DSTG--HELNRNRLIALMSAIVLEEHP---------GTTIVTDSVTSDGLTTFIEKKLGGKHHRFKRGYK 274 (461)
Q Consensus 208 DgDR~~~v--d~~G--~~l~~d~~~~L~~~~~l~~~~---------~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~G~k 274 (461)
||||++++ |++| ++++||++++|+++++++..+ ..++|.+.++|+.+.+.+++.+|+++++||||||
T Consensus 292 DaDR~~iv~~D~~G~~~~l~gd~i~aLla~~l~~~~~~~~~~~~~~~~~vv~tv~sn~~~~~~i~~~~G~~v~~t~vG~k 371 (544)
T 2dka_A 292 DADRLICYYQNNDNKFKLLDGDKLSTLFALFLQQLFKQIDPTKISLNIGVVQTAYANGSSTKYVEDVLKIPVRCTPTGVK 371 (544)
T ss_dssp TSCCEEEEEECTTSCEEEECHHHHHHHHHHHHHHHHTTSCTTTCCCCEEEEECTTSCHHHHHHHHHTSCCCEEECCSSHH
T ss_pred CCCceEEEEEcCCCCeEEeCHHHHHHHHHHHHHHhcccCCCcccccCCcEEEEeccccHHHHHHHHHcCCceEEEeCcHH
Confidence 99999999 9999 689999999999999987633 2358878788998999998778999999999999
Q ss_pred HHHHHHHHhcccCCcceeEeeeecc--eeecCCc------------------------------cCCcHHHHHHHHHHHH
Q 012560 275 NVIDEAIRLNSIGEESHLAIETSGH--GALKENH------------------------------WLDDGAYLMVKLLNKL 322 (461)
Q Consensus 275 ~i~~~~~~~~~~g~~~~~g~E~sG~--~~~~~~~------------------------------~~~Dgi~aa~~ll~~l 322 (461)
||+++|.+.+ ..+|||+||| ++|++++ ...||+..++.+++.+
T Consensus 372 ~v~~~m~~~~-----~~~ggE~sGhg~~if~~~~~~~~~~~~~~~~~~kd~~~~~~~~~~l~a~~tgd~l~~~l~vl~~~ 446 (544)
T 2dka_A 372 HLHHEAENFD-----IGVYFEANGHGTVIFNPEAEKKIFDYKPNNDNEAKAIKVLQNFSQLINQTVGDAISDLLAVLIVV 446 (544)
T ss_dssp HHHHHHTTSS-----EEEEECTTSCEEEEECHHHHHHHHHCCCSSHHHHHHHHHHHHHHHHSCSSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHhcC-----CcEEEcccCCeeEEECchhhhhhcccccCChhHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHH
Confidence 9999998765 4699999999 7888763 3588888888887877
Q ss_pred HHHHHcCCCCCcccHHHHHhhccCCCccceeeeeecccCCcccCCccchhhHHHHHHHHhhhcCCCCCCCCCcccCceEE
Q 012560 323 ASARAAGRGGGSKVLTDLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENRVDSDPKLQKAPVNYEGVRV 402 (461)
Q Consensus 323 ~~~~~~~~~~~~~~Ls~ll~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~dGlki 402 (461)
+.++ ++|++++..+|.+... . .++. |++.. +.++++.... ..+ .......+||+|+
T Consensus 447 ~~~g--------~~lsel~~~~~~~p~~-~--~~v~--v~~~~-------~~~~~~~~~~-~~~---~~~~~~~iDGv~~ 502 (544)
T 2dka_A 447 HYLK--------LSPSDWDNEYTDLPNK-L--VKVI--VPDRS-------IFKTTNAERT-LVE---PKGMQDEIDKLVA 502 (544)
T ss_dssp HHTT--------CCHHHHHTTSCCCCEE-E--EEC----------------CCCCTTTC--CC----CTTHHHHHHHHHT
T ss_pred HHhC--------CCHHHHHhhhhccCch-h--hccc--cchhh-------hhhHHHhhhh-hcC---chhhhcccceEEE
Confidence 6643 4499999998885322 2 2333 55410 1111211111 000 1112456899999
Q ss_pred EecCeEEEEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHhh
Q 012560 403 SGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATK 444 (461)
Q Consensus 403 ~~~~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v~ 444 (461)
.+++||++||||||||++|||+||.+++.++++++++.+.|+
T Consensus 503 ~~~~gw~lvRpSGTEP~lRvy~Ea~~~e~~~~l~~~~~~~v~ 544 (544)
T 2dka_A 503 QYPNGRSFVRASGTEDAVRVYAEADTQNNVEELSKAVSELVK 544 (544)
T ss_dssp TSTTCEEEEEEC----CEEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred EcCCEEEEEEcCCCCCEEEEEEEeCCHHHHHHHHHHHHHHhC
Confidence 988999999999999999999999999999999999998774
No 14
>1wjw_A Phosphoacetylglucosamine mutase; carbohydrate metabolism, structural genomics, riken structural genomics/proteomics initiative, RSGI, isomerase; NMR {Mus musculus} SCOP: d.129.2.1
Probab=99.55 E-value=1.8e-16 Score=130.43 Aligned_cols=92 Identities=14% Similarity=0.049 Sum_probs=67.8
Q ss_pred HHHhhccCCCccceeeeeecccCCcccCCccchhhHHHHHHHHhh-hcCCCCCCCCCcccCceEEEecCeEEEEEecCCC
Q 012560 339 DLVDGLEEPGFAVELRLKIDQNHSDLKGGSFRDYGEAVLKHLENR-VDSDPKLQKAPVNYEGVRVSGSGGWFLLRLSLHD 417 (461)
Q Consensus 339 ~ll~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~-~~~~~~~~~~~~~~dGlki~~~~~w~liRpSgTe 417 (461)
++++.+|.+... ..++. |++ +..+|+++.+. +.+ ....++.+||+++.+++||++|||||||
T Consensus 5 ~l~~~~~~yp~~---~~nv~--v~~---------k~~v~~~~~e~~~~~---~~~~~~~idgl~~~~~~gwvlvRpSGTE 67 (112)
T 1wjw_A 5 SSGAIYVDLPNR---QLKVK--VAD---------RRVISTTDAERQAVT---PPGLQEAINDLVKKYTLARAFVRPSGTE 67 (112)
T ss_dssp CCCSCCCCCCEE---EEEEC--CCC---------SSSSTTSCCCCSSSS---STTHHHHHHHHHHHSSSEEEEEECSSSS
T ss_pred HHHHhhhhhcEe---eeEEE--cCC---------hhHHHHHHHHHhhcc---chhhhhhhhcEEEEcCCcEEEEEeCCCc
Confidence 456667775422 34455 665 22356555442 211 1123567899999998899999999999
Q ss_pred ceeEEEEeeCCHHHHHHHHHHHHHHhhcCC
Q 012560 418 PVLPLNIEAPSREDAVKLGLAVAAATKEFP 447 (461)
Q Consensus 418 P~irvy~Ea~~~~~a~~l~~~~~~~v~~~~ 447 (461)
|+||||+|+.+.+.++++++.+.+.|++++
T Consensus 68 P~irvy~Ea~~~~~~~~~~~~~~~~i~~~~ 97 (112)
T 1wjw_A 68 DIVRVYAEANSQESADRLAYEVSLLVFQLA 97 (112)
T ss_dssp SSEEEEEEESSHHHHHHHHHHHHHHHHHHT
T ss_pred cEEEEEEEECCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998865
No 15
>2dka_A Phosphoacetylglucosamine mutase; isomerase; 1.93A {Candida albicans} PDB: 2dkc_A* 2dkd_A*
Probab=72.59 E-value=1.6 Score=45.09 Aligned_cols=32 Identities=25% Similarity=0.346 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhC-CCcEEEeCCCCchhhhhhhc
Q 012560 2 LQDAVSRGITGA-GLDVVQYGLASTPAMFNSTL 33 (461)
Q Consensus 2 l~~a~~~gL~s~-Gi~V~~~g~~~tP~~~~a~~ 33 (461)
|.+|+++||.+. |.+|.++|.++||+++|++.
T Consensus 148 l~~al~~gl~~~~G~~v~~~G~~ttP~l~~~v~ 180 (544)
T 2dka_A 148 LSMATIDGFQSVPNTKYQDFGLFTTPELHYVTR 180 (544)
T ss_dssp HHHHHHHHHHTSSSEEEEEEEECCHHHHHHHHH
T ss_pred HHHHHHhhhhhhcCCeEEEecccccchheeeee
Confidence 678999999999 99999999999999999775
No 16
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=66.92 E-value=16 Score=30.64 Aligned_cols=65 Identities=14% Similarity=0.046 Sum_probs=39.4
Q ss_pred cEEEEeCCCC--CchHHHHHHHhhcCCCcccceecCCCCCCCCCCCCCCc-hHHHHHHHHHHHhcCCcEEEeeCCCC
Q 012560 136 FHIVVDAGNG--AGGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPED-KTAMKAIIQAVLDNKADLGIIFDTDV 209 (461)
Q Consensus 136 lkVvvd~~~G--~~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~-~~~l~~l~~~v~~~~adlgia~D~Dg 209 (461)
+||++-+-|+ .....+.+.|++.|.+|+. .. + +.. ++.+ |..-..+.+.|.+..+|+||.+.|-|
T Consensus 2 MkIaigsDhaG~~lK~~i~~~L~~~G~eV~D-~G--~---~~~---~~~dYpd~a~~va~~V~~g~~d~GIliCGTG 69 (149)
T 2vvr_A 2 KKIAFGCDHVGFILKHEIVAHLVERGVEVID-KG--T---WSS---ERTDYPHYASQVALAVAGGEVDGGILICGTG 69 (149)
T ss_dssp CEEEEEECTTGGGGHHHHHHHHHHTTCEEEE-CC--C---CSS---SCCCHHHHHHHHHHHHHTTSSSEEEEEESSS
T ss_pred cEEEEEeCchhHHHHHHHHHHHHHCCCEEEE-eC--C---CCC---CCCChHHHHHHHHHHHHcCCCceEEEEeCCc
Confidence 4788888776 4567888899999998862 21 1 111 1111 23334566777777777776665443
No 17
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=64.22 E-value=11 Score=32.11 Aligned_cols=67 Identities=16% Similarity=0.087 Sum_probs=39.8
Q ss_pred CCcEEEEeCCCCC--chHHHHHHHhhcCCCcccceecCCCCCCCCCCCCCCc-hHHHHHHHHHHHhcCCcEEEeeCCCC
Q 012560 134 EGFHIVVDAGNGA--GGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPED-KTAMKAIIQAVLDNKADLGIIFDTDV 209 (461)
Q Consensus 134 ~~lkVvvd~~~G~--~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~-~~~l~~l~~~v~~~~adlgia~D~Dg 209 (461)
.++||++-+-|+- -...+...|++.|.+|+. . .++ ..++.+ |..-..+.+.|.+..+|+||.+.|-|
T Consensus 19 ~~MkIaIgsDhaG~~lK~~i~~~L~~~G~eV~D-~--G~~------~~~~~dYpd~a~~va~~V~~g~~d~GIliCGTG 88 (169)
T 3ph3_A 19 SHMKIGIGSDHGGYNLKREIADFLKKRGYEVID-F--GTH------GNESVDYPDFGLKVAEAVKSGECDRGIVICGTG 88 (169)
T ss_dssp --CEEEEEECGGGHHHHHHHHHHHHHTTCEEEE-C--CCC------SSSCCCHHHHHHHHHHHHHTTSSSEEEEEESSS
T ss_pred CCCEEEEEeCchHHHHHHHHHHHHHHCCCEEEE-c--CCC------CCCCCCHHHHHHHHHHHHHcCCCCEEEEEcCCc
Confidence 5689999988863 345777788999998762 1 111 111111 23334567777777777777665544
No 18
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=62.52 E-value=13 Score=31.08 Aligned_cols=65 Identities=17% Similarity=0.096 Sum_probs=37.9
Q ss_pred cEEEEeCCCCC--chHHHHHHHhhcCCCcccceecCCCCCCCCCCCCCCc-hHHHHHHHHHHHhcCCcEEEeeCCCC
Q 012560 136 FHIVVDAGNGA--GGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPED-KTAMKAIIQAVLDNKADLGIIFDTDV 209 (461)
Q Consensus 136 lkVvvd~~~G~--~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~-~~~l~~l~~~v~~~~adlgia~D~Dg 209 (461)
+||++-+-|+- -...+...|++.|.+|+. . .++ ..++.+ |..-..+.+.|.+..+|+||.+.|-|
T Consensus 1 MkI~igsDhaG~~lK~~i~~~L~~~G~eV~D-~--G~~------~~~~~dYpd~a~~va~~V~~g~~d~GIliCGTG 68 (149)
T 3he8_A 1 MKIGIGSDHGGYNLKREIADFLKKRGYEVID-F--GTH------GNESVDYPDFGLKVAEAVKSGECDRGIVICGTG 68 (149)
T ss_dssp CEEEEEECGGGHHHHHHHHHHHHHTTCEEEE-C--CCC------SSSCCCHHHHHHHHHHHHHTTSSSEEEEEESSS
T ss_pred CEEEEEECchhHHHHHHHHHHHHHCCCEEEE-c--CCC------CCCCCCHHHHHHHHHHHHHcCCCCEEEEEcCCc
Confidence 36777777753 344677788899998762 1 111 111111 33334667777777777777665543
No 19
>3brc_A Conserved protein of unknown function; methanobacterium thermoautotrophicum, STR genomics, MCSG, PSI-2; 1.60A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=62.25 E-value=17 Score=29.93 Aligned_cols=82 Identities=20% Similarity=0.107 Sum_probs=55.3
Q ss_pred EEEEeCCCCCchHHHHHHHhhcCCCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEe-----eCCCCce
Q 012560 137 HIVVDAGNGAGGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGII-----FDTDVDR 211 (461)
Q Consensus 137 kVvvd~~~G~~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia-----~D~DgDR 211 (461)
+|||-..|+-=-.++..++.+++-.-.. +.+- |+..++-+..-++....-.+...+||+.++ .=|.|.=
T Consensus 38 kIvV~t~N~kKf~vi~~il~~~~~~~i~--~l~i----~Tn~aDlTRmPA~~K~LmAvD~~dADlvIARGRLGvPGSGSm 111 (156)
T 3brc_A 38 RTVVPNWNAEKVDAINDVLRSFNLREAE--HLQF----NTNWADLTRMPAVTKALMALDISGADLVIARGRLGVPGSGSL 111 (156)
T ss_dssp CEEECCCCHHHHHHHHHHHHHTTCCCCE--ECCS----CCGGGGGSSSHHHHHHHHHHHHHCCSEEEEEEECSSTTSCEE
T ss_pred eEEEecCCchHhHHHHHHHHHhcCCccc--eeec----cCcchhcccCcHHHHHHHheeccCCcEEEEcccccCCCCccE
Confidence 7999999988888899999888543221 1222 222222222334555555677889999987 4577777
Q ss_pred eEEEcCCCccccc
Q 012560 212 SAAVDSTGHELNR 224 (461)
Q Consensus 212 ~~~vd~~G~~l~~ 224 (461)
+.+.|.+|++|++
T Consensus 112 LvimD~kGRiLta 124 (156)
T 3brc_A 112 LVIMDSRGRLLSA 124 (156)
T ss_dssp EEEEETTSCEEEE
T ss_pred EEEEcCCCcEEee
Confidence 7888999998865
No 20
>3qay_A Endolysin; amidase A/B fold, lyase; 2.00A {Clostridium phage PHICD27}
Probab=60.73 E-value=21 Score=30.76 Aligned_cols=66 Identities=21% Similarity=0.250 Sum_probs=41.1
Q ss_pred cEEEEeCCCC---------Cch------------HHHHHHHhhcCCCcccceecCCCCCCCCCCCCCCchHHHHHHHHHH
Q 012560 136 FHIVVDAGNG---------AGG------------FFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAV 194 (461)
Q Consensus 136 lkVvvd~~~G---------~~~------------~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v 194 (461)
++||+|++|| +.+ ..+...|++.|++|... ..++..|. +. ...|.+-.+.+
T Consensus 2 m~IviDpGHGG~D~G~~~ga~g~~~Ekdi~l~ia~~l~~~L~~~G~~V~v~--ltR~d~~~-----~~-~~~L~~R~~~A 73 (180)
T 3qay_A 2 MKICITVGHSILKSGACTSADGVVNEYQYNKSLAPVLADTFRKEGHKVDVI--ICPEKQFK-----TK-NEEKSYKIPRV 73 (180)
T ss_dssp CEEEEEECCCBCTTSCBCSCBSSSBHHHHHHHHHHHHHHHHHHTTCEEEEE--CCCSSCCS-----ST-THHHHHHHHHH
T ss_pred eEEEEECCCCCCCCCCcCCCCCCccHHHHHHHHHHHHHHHHHhcCCcceEE--ECCCCCcc-----cc-ccCHHHHHHHH
Confidence 5899999999 112 12456688889874101 22333332 11 23356666778
Q ss_pred HhcCCcEEEeeCCCC
Q 012560 195 LDNKADLGIIFDTDV 209 (461)
Q Consensus 195 ~~~~adlgia~D~Dg 209 (461)
.+.++|+-|.+=.|+
T Consensus 74 n~~~aDlfISIH~Na 88 (180)
T 3qay_A 74 NSGGYDLLIELHLNA 88 (180)
T ss_dssp HHSCCSEEEEEEEEC
T ss_pred HhcCCCEEEEeeeCC
Confidence 889999999887666
No 21
>2ppw_A Conserved domain protein; the putative RPIB, PSI-2, protein initiative, MCSG, structural genomics, midwest center for S genomics; HET: MSE; 2.01A {Streptococcus pneumoniae}
Probab=53.98 E-value=39 Score=30.03 Aligned_cols=110 Identities=8% Similarity=-0.048 Sum_probs=61.5
Q ss_pred CcEEEEeCCCCCch------HHHHHHHhhcCCCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCC
Q 012560 135 GFHIVVDAGNGAGG------FFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTD 208 (461)
Q Consensus 135 ~lkVvvd~~~G~~~------~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~D 208 (461)
++||++-+-|.... ..+...|++.|.+|+. ..... ....+...-|..-..+.+.|.+..+|+||.+.|-
T Consensus 3 ~MkIaIgsDha~~lKn~ilk~~i~~~L~~~G~eV~D-~G~~s----~~d~~s~DYPd~a~~vA~~V~~g~~d~GIliCGT 77 (216)
T 2ppw_A 3 AMKIALINENSQASKNHIIYDSLKEATDKKGYQLFN-YGMRG----EEGESQLTYVQNGLMAAILLNTKAVDFVVTGCGT 77 (216)
T ss_dssp CCEEEECCCTTTGGGHHHHHHHHHHHHHHHTCEEEE-CSCCS----CTTCCCCCHHHHHHHHHHHHHTTSCSEEEEEESS
T ss_pred CcEEEEEcCChHhhhhhhHHHHHHHHHHHCCCEEEE-eCCCC----CCCCCCCChHHHHHHHHHHHHcCCCCeEEEEcCC
Confidence 48999999888442 4778888999998862 21110 0000001113333456677777777777666554
Q ss_pred CceeEEEcCCCccccchhHHHHHHHHHHHhCCCCeEEEeccCChhHHHHHHHHcCCeEEEEec
Q 012560 209 VDRSAAVDSTGHELNRNRLIALMSAIVLEEHPGTTIVTDSVTSDGLTTFIEKKLGGKHHRFKR 271 (461)
Q Consensus 209 gDR~~~vd~~G~~l~~d~~~~L~~~~~l~~~~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~~ 271 (461)
| .| .-++. .+-++|.+..++.+.......+.+++.+..-+-
T Consensus 78 G--------iG---------~sIAA-----NKv~GIRAAlc~d~~sA~laR~HNnANVL~lG~ 118 (216)
T 2ppw_A 78 G--------VG---------AMLAL-----NSFPGVVCGLAVDPTDAYLYSQINGGNALSIPY 118 (216)
T ss_dssp S--------HH---------HHHHH-----TTSTTCCEEECSSHHHHHHHHHHTCCSEEEEES
T ss_pred c--------HH---------HHHHh-----hcCCCeEEEEeCCHHHHHHHHHhcCceEEEeCC
Confidence 3 12 11111 123345555666665555555566788887765
No 22
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi} SCOP: c.121.1.0 PDB: 3k7s_A* 3k7o_A* 3k8c_A* 3m1p_A
Probab=50.96 E-value=29 Score=29.88 Aligned_cols=65 Identities=8% Similarity=0.002 Sum_probs=39.2
Q ss_pred cEEEEeCCCCC--chHHHHHHHhh--cCCCcccceecCCCCCCCCCCCCCCc-hHHHHHHHHHHHhcCCcEEEeeCCCC
Q 012560 136 FHIVVDAGNGA--GGFFAAKVLEP--LGAKTSGSQFLEPDGMFPNHIPNPED-KTAMKAIIQAVLDNKADLGIIFDTDV 209 (461)
Q Consensus 136 lkVvvd~~~G~--~~~~~~~ll~~--lg~~v~~~~~~~~d~~f~~~~p~P~~-~~~l~~l~~~v~~~~adlgia~D~Dg 209 (461)
+||++-+-|+- -...+.+.|++ .|.+|+. . .++ ..++.+ |..-..+.+.|.+..+|+||.+.|-|
T Consensus 23 MkIaIgsDhaG~~lK~~i~~~L~~~~~G~eV~D-~--G~~------s~~s~DYPd~a~~vA~~V~~g~~d~GIliCGTG 92 (179)
T 3k7p_A 23 RRVAIGTDHPAFAIHENLILYVKEAGDEFVPVY-C--GPK------TAESVDYPDFASRVAEMVARKEVEFGVLAAGSG 92 (179)
T ss_dssp EEEEEEECTGGGGGHHHHHHHHHHTCTTEEEEE-C--SCS------SSSCCCHHHHHHHHHHHHHTTSSSEEEEEESSS
T ss_pred eEEEEEECchHHHHHHHHHHHHHhcCCCCeEEE-c--CCC------CCCCCCHHHHHHHHHHHHHcCCCCEEEEEccCc
Confidence 68999888863 45577788888 8988752 1 111 111111 23334567777777777777665543
No 23
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=49.66 E-value=14 Score=31.53 Aligned_cols=67 Identities=18% Similarity=0.169 Sum_probs=39.1
Q ss_pred CcEEEEeCCCCC--chHHHHHHHhhcCCCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCC
Q 012560 135 GFHIVVDAGNGA--GGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDV 209 (461)
Q Consensus 135 ~lkVvvd~~~G~--~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~Dg 209 (461)
.+||++-+-|+- -...+.+.|++.|.+|+. .....+ . + ...| ..-..+.+.|.+..+|+||.+.|-|
T Consensus 21 ~MkIaIgsDhaG~~lK~~i~~~L~~~G~eV~D-~G~~~~-~-~--~dYP---d~a~~va~~V~~g~~d~GIliCGTG 89 (166)
T 3s5p_A 21 SMKVAFASDHGGRDLRMFLQQRASAHGYEVMD-LGTESD-A-S--VDYP---DFAKIGCEAVTSGRADCCILVCGTG 89 (166)
T ss_dssp TCEEEEEECGGGHHHHHHHHHHHHHTTCEEEE-EEC------------C---HHHHHHHHHHHTTSCSEEEEEESSS
T ss_pred ceEEEEEECchHHHHHHHHHHHHHHCCCEEEE-cCCCCC-C-C--CCHH---HHHHHHHHHHHcCCCcEEEEEcCCc
Confidence 479999988864 345777788999998862 221110 0 0 1122 2224567777777777777665543
No 24
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=45.51 E-value=59 Score=27.30 Aligned_cols=68 Identities=18% Similarity=0.201 Sum_probs=40.3
Q ss_pred CCcEEEEeCCCCC--chHHHHHHHhhcCCCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCC
Q 012560 134 EGFHIVVDAGNGA--GGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDV 209 (461)
Q Consensus 134 ~~lkVvvd~~~G~--~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~Dg 209 (461)
...||++-+-|+- -...+.+.|++.|.+|+. . .++ ... ...-|..-..+.+.|.+..+|+||.+.|-|
T Consensus 11 ~~~~i~igsDhaG~~lK~~i~~~L~~~G~eV~D-~--G~~---~~~--~~dYpd~a~~va~~V~~g~~d~GIliCGTG 80 (155)
T 1o1x_A 11 HHVKIAIASDHAAFELKEKVKNYLLGKGIEVED-H--GTY---SEE--SVDYPDYAKKVVQSILSNEADFGILLCGTG 80 (155)
T ss_dssp CCCEEEEEECSTTHHHHHHHHHHHHHTTCEEEE-C--CCC---SSS--CCCHHHHHHHHHHHHHTTSCSEEEEEESSS
T ss_pred cceeEEEeeCchHHHHHHHHHHHHHHCCCEEEE-e--CCC---CCC--CCChHHHHHHHHHHHHcCCCceEEEEcCCc
Confidence 4578999887764 445677788899998762 2 111 110 001133334567777777777777665544
No 25
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=42.79 E-value=32 Score=32.04 Aligned_cols=59 Identities=15% Similarity=0.220 Sum_probs=36.3
Q ss_pred CcEEEEeCCCCC----------ch-----HHHHHHHhhcCCC--cccceecCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 012560 135 GFHIVVDAGNGA----------GG-----FFAAKVLEPLGAK--TSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVL 195 (461)
Q Consensus 135 ~lkVvvd~~~G~----------~~-----~~~~~ll~~lg~~--v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~ 195 (461)
++.|++|+.|++ ++ ..++..--.+|++ ++ +.|.+||-..+ ..|+.-.++.|+.+.+.++
T Consensus 195 ~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GA~gl~I-E~H~~pd~al~-D~~~sl~p~el~~lv~~i~ 270 (285)
T 3sz8_A 195 GCPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIAVGIAGLFL-EAHPDPDRARC-DGPSALPLHQLEGLLSQMK 270 (285)
T ss_dssp SCCEEEETTTTCC---------------HHHHHHHHHHHCCSEEEE-EEESCGGGCSC-SSCCCEEGGGHHHHHHHHH
T ss_pred CCCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHHhCCCEEEE-EeccChhccCC-chhhccCHHHHHHHHHHHH
Confidence 578999999984 34 3455556678998 56 56777777665 3333333444555544444
No 26
>3sgw_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, valley fever; 1.70A {Coccidioides immitis} PDB: 3sdw_A 3qd5_A*
Probab=41.65 E-value=40 Score=29.14 Aligned_cols=68 Identities=7% Similarity=-0.011 Sum_probs=39.2
Q ss_pred CCcEEEEeCCCCC--chHHHHHHHhhcC--CCcccceecCCCCCCCCCCCCCC-chHHHHHHHHHHHhcCCcEEEeeCCC
Q 012560 134 EGFHIVVDAGNGA--GGFFAAKVLEPLG--AKTSGSQFLEPDGMFPNHIPNPE-DKTAMKAIIQAVLDNKADLGIIFDTD 208 (461)
Q Consensus 134 ~~lkVvvd~~~G~--~~~~~~~ll~~lg--~~v~~~~~~~~d~~f~~~~p~P~-~~~~l~~l~~~v~~~~adlgia~D~D 208 (461)
.++||++-+-|+- -...+...|++.| .+|+. .....+ .++. -|..-..+.+.|.+..+|+||.+.|-
T Consensus 28 ~~MkIaIgsDHaG~~LK~~i~~~L~~~G~g~eV~D-~G~~s~-------~e~~DYPd~a~~vA~~V~~ge~d~GIliCGT 99 (184)
T 3sgw_A 28 PPLRLAIACDDAGVSYKEALKAHLSDNPLVSSITD-VGVTST-------TDKTAYPHVAIQAAQLIKDGKVDRALMICGT 99 (184)
T ss_dssp CCEEEEEEECGGGHHHHHHHHHHHTTCTTEEEEEE-CSCCST-------TCCCCHHHHHHHHHHHHHTTSCSEEEEEESS
T ss_pred CCcEEEEEECchhHHHHHHHHHHHHhCCCCcEEEE-cCCCCC-------CCCCCHHHHHHHHHHHHHcCCCcEEEEEcCC
Confidence 4589999998863 3446777788888 57652 111100 1111 12333456777777777777766544
Q ss_pred C
Q 012560 209 V 209 (461)
Q Consensus 209 g 209 (461)
|
T Consensus 100 G 100 (184)
T 3sgw_A 100 G 100 (184)
T ss_dssp S
T ss_pred c
Confidence 3
No 27
>2jpi_A Hypothetical protein; alpha-helix/beta-sheet, structural genomics, ontario centre for structural proteomics, OCSP; NMR {Pseudomonas aeruginosa}
Probab=40.73 E-value=60 Score=25.84 Aligned_cols=70 Identities=10% Similarity=0.084 Sum_probs=45.8
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCcccCceEEEecCeEEEEEecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcCC
Q 012560 373 GEAVLKHLENRVDSDPKLQKAPVNYEGVRVSGSGGWFLLRLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEFP 447 (461)
Q Consensus 373 ~~~v~~~l~~~~~~~~~~~~~~~~~dGlki~~~~~w~liRpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v~~~~ 447 (461)
-.+.+++|.+.+..+ ..+.-+. +..++.++.| .++-+.....++|.+||.+++.+..+..-+.+.|..+-
T Consensus 35 asryl~qLc~H~~hK--~~ve~d~-~~g~i~fp~G--~~~l~a~~~~L~i~v~A~d~e~L~~lk~VVa~HL~rFa 104 (118)
T 2jpi_A 35 AARYVNRLCKHWGHK--FEVELTP-ERGFIDFGDS--NCELLAHPDHVLMILNSPDEDSLAHMQNVVADHLQRMA 104 (118)
T ss_dssp HHHHHHHHHHHTTTS--SEEEECS-SEEEEECSSS--CEEEEEETTEEEEEEEESSHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhh--CCceEcC-CceEEEeCCe--EEEEEecCCeEEEEEEeCCHHHHHHHHHHHHHHHHHhc
Confidence 357888887766432 1111111 2235556555 24445666789999999999999999888888887763
No 28
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=38.66 E-value=87 Score=27.73 Aligned_cols=107 Identities=12% Similarity=-0.009 Sum_probs=59.7
Q ss_pred CcEEEEeCCCCCc-hH-----HHHHHHhhcCCCcccceecCCCCCCCCCCCCCC-chHHHHHHHHHHHhcCCcEEEeeCC
Q 012560 135 GFHIVVDAGNGAG-GF-----FAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPE-DKTAMKAIIQAVLDNKADLGIIFDT 207 (461)
Q Consensus 135 ~lkVvvd~~~G~~-~~-----~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~-~~~~l~~l~~~v~~~~adlgia~D~ 207 (461)
.+||++-+-|+.. .. .+...|++.|.+|+. ....++. .++. -|..-..+.+.|.+..+|+||.+.|
T Consensus 3 ~MkIaigsDha~~lK~~~i~~~l~~~L~~~G~eV~D-~G~~~~~------~~~~dYpd~a~~vA~~V~~g~~d~GIliCG 75 (214)
T 3ono_A 3 AMKIALMMENSQAAKNAMVAGELNSVAGGLGHDVFN-VGMTDEN------DHHLTYIHLGIMASILLNSKAVDFVVTGCG 75 (214)
T ss_dssp CCEEEECCCGGGGGGHHHHHHHHHHHHHHTTCEEEE-CSCSSTT------SSCCCHHHHHHHHHHHHHTTSCSEEEEEES
T ss_pred ccEEEEECCCcHHHHChhHHHHHHHHHHHCCCEEEE-cCCCCCC------CCCCCHHHHHHHHHHHHHcCCCCEEEEEcC
Confidence 4789999988843 33 466778889988762 2110110 1111 1333345667777777777776655
Q ss_pred CCceeEEEcCCCccccchhHHHHHHHHHHHhCCCCeEEEeccCChhHHHHHHHHcCCeEEEEe
Q 012560 208 DVDRSAAVDSTGHELNRNRLIALMSAIVLEEHPGTTIVTDSVTSDGLTTFIEKKLGGKHHRFK 270 (461)
Q Consensus 208 DgDR~~~vd~~G~~l~~d~~~~L~~~~~l~~~~~~~vv~~~~ss~~~~~~ia~~~g~~v~~t~ 270 (461)
-| .| .-++. - +-++|.+..++++.......+.+++.+..-+
T Consensus 76 TG--------iG---------~siaA---N--Kv~GIRAAlc~d~~sA~laR~hNnANVL~lG 116 (214)
T 3ono_A 76 TG--------QG---------ALMSC---N--LHPGVVCGYCLEPSDAFLFNQINNGNAISLA 116 (214)
T ss_dssp SS--------HH---------HHHHH---H--TSTTCCEEECSSHHHHHHHHHHTCCSEEEEE
T ss_pred Cc--------HH---------HHHHH---h--cCCCeEEEEeCCHHHHHHHHHHcCCcEEEec
Confidence 44 12 22221 1 2233555566666555555556678888766
No 29
>3ne8_A N-acetylmuramoyl-L-alanine amidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 1.24A {Bartonella henselae}
Probab=36.15 E-value=68 Score=28.84 Aligned_cols=63 Identities=21% Similarity=0.283 Sum_probs=39.6
Q ss_pred CCcEEEEeCCCCC-----ch--------------HHHHHHHhhcC-CCcccceecCCCCCCCCCCCCCCchHHHHHHHHH
Q 012560 134 EGFHIVVDAGNGA-----GG--------------FFAAKVLEPLG-AKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQA 193 (461)
Q Consensus 134 ~~lkVvvd~~~G~-----~~--------------~~~~~ll~~lg-~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~ 193 (461)
.+++||+|++||- .+ ..+...|++.| ++|+- ...+..|. .|.+-.+.
T Consensus 3 ~~~~IviDpGHGG~D~Ga~g~~g~~Ek~~~l~ia~~l~~~L~~~g~~~V~~---tR~~D~~~----------~l~~R~~~ 69 (234)
T 3ne8_A 3 ASFRVVLDPGHGGIDGGARGVTGILEKDVTLAFARALRDELQKGSHTIVAL---TRDSDIFL----------RLSERVKK 69 (234)
T ss_dssp CCEEEEEEECCBTTBCCCBCTTSCBHHHHHHHHHHHHHHHHHHSSSEEEEE---SCSSSCCC----------CHHHHHHH
T ss_pred CCcEEEEECCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHHhCCCcEEEE---eCCCCCcC----------CHHHHHHH
Confidence 4679999999982 12 13344566666 66642 22222232 14555667
Q ss_pred HHhcCCcEEEeeCCCC
Q 012560 194 VLDNKADLGIIFDTDV 209 (461)
Q Consensus 194 v~~~~adlgia~D~Dg 209 (461)
+.+.++|+-|.+=.|+
T Consensus 70 An~~~adlfiSiH~Na 85 (234)
T 3ne8_A 70 AQEFDADLFISIHADT 85 (234)
T ss_dssp HHHTTCSEEEEEECCC
T ss_pred HHhhCCCEEEEEecCC
Confidence 7888999999987776
No 30
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=35.79 E-value=46 Score=27.79 Aligned_cols=49 Identities=16% Similarity=0.264 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhCCCcEEEeCCCCc-----hhhhhhhccccCcccCCCCeEEEEcCC
Q 012560 2 LQDAVSRGITGAGLDVVQYGLAST-----PAMFNSTLTEGDAFFCPVDGAIMITAS 52 (461)
Q Consensus 2 l~~a~~~gL~s~Gi~V~~~g~~~t-----P~~~~a~~~~~~~~~~~a~gGI~ITaS 52 (461)
||+.+.+-|.+.|.+|.|+|.-.. |-+...+... ...-.++-||.|-.|
T Consensus 14 lK~~i~~~L~~~G~eV~D~G~~~~~~~dYpd~a~~va~~--V~~g~~d~GIliCGT 67 (149)
T 3he8_A 14 LKREIADFLKKRGYEVIDFGTHGNESVDYPDFGLKVAEA--VKSGECDRGIVICGT 67 (149)
T ss_dssp HHHHHHHHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHH--HHTTSSSEEEEEESS
T ss_pred HHHHHHHHHHHCCCEEEEcCCCCCCCCCHHHHHHHHHHH--HHcCCCCEEEEEcCC
Confidence 789999999999999999986543 3333322211 011234667777654
No 31
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=35.52 E-value=59 Score=29.83 Aligned_cols=60 Identities=18% Similarity=0.243 Sum_probs=37.1
Q ss_pred CcEEEEeCCCCCch-HHH---HHHHhhcCCC--cccceecCCCCCCCCCCCCCCchHHHHHHHHHHHh
Q 012560 135 GFHIVVDAGNGAGG-FFA---AKVLEPLGAK--TSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLD 196 (461)
Q Consensus 135 ~lkVvvd~~~G~~~-~~~---~~ll~~lg~~--v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~ 196 (461)
++.|++||.|+.+. .++ +..--.+|++ ++ +.|..||-... ..+..-.++.+..+.+.+++
T Consensus 192 ~~pVi~d~sH~~g~~~~v~~~~~aAva~Ga~Gl~i-E~H~~~d~al~-D~~~sl~p~~~~~l~~~i~~ 257 (262)
T 1zco_A 192 HLPIIVDPSHPAGRRSLVIPLAKAAYAIGADGIMV-EVHPEPEKALS-DSQQQLTFDDFLQLLKELEA 257 (262)
T ss_dssp SSCEEECSSTTTCSGGGHHHHHHHHHHTTCSEEEE-EBCSSGGGCSS-CTTTCBCHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCCCCccchHHHHHHHHHHcCCCEEEE-EecCCccccCC-hhhcCCCHHHHHHHHHHHHH
Confidence 46788999999875 222 2223468888 66 45666666555 34444446666666666654
No 32
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=34.53 E-value=65 Score=26.79 Aligned_cols=22 Identities=23% Similarity=0.253 Sum_probs=20.1
Q ss_pred HHHHHHHHHHhCCCcEEEeCCC
Q 012560 2 LQDAVSRGITGAGLDVVQYGLA 23 (461)
Q Consensus 2 l~~a~~~gL~s~Gi~V~~~g~~ 23 (461)
||+.+.+-|.+.|.+|.|+|.-
T Consensus 21 lK~~i~~~L~~~G~eV~D~G~~ 42 (148)
T 4em8_A 21 LRLFLSAYLRDLGCEVFDCGCD 42 (148)
T ss_dssp HHHHHHHHHHHTTCEEEECCCC
T ss_pred HHHHHHHHHHHCCCEEEEeCCC
Confidence 7899999999999999999864
No 33
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=34.18 E-value=49 Score=28.20 Aligned_cols=49 Identities=16% Similarity=0.264 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhCCCcEEEeCCCCc-----hhhhhhhccccCcccCCCCeEEEEcCC
Q 012560 2 LQDAVSRGITGAGLDVVQYGLAST-----PAMFNSTLTEGDAFFCPVDGAIMITAS 52 (461)
Q Consensus 2 l~~a~~~gL~s~Gi~V~~~g~~~t-----P~~~~a~~~~~~~~~~~a~gGI~ITaS 52 (461)
||+.+.+-|.+.|.+|.|+|.-.. |-+...+... ...-.++-||.|-.|
T Consensus 34 lK~~i~~~L~~~G~eV~D~G~~~~~~~dYpd~a~~va~~--V~~g~~d~GIliCGT 87 (169)
T 3ph3_A 34 LKREIADFLKKRGYEVIDFGTHGNESVDYPDFGLKVAEA--VKSGECDRGIVICGT 87 (169)
T ss_dssp HHHHHHHHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHH--HHTTSSSEEEEEESS
T ss_pred HHHHHHHHHHHCCCEEEEcCCCCCCCCCHHHHHHHHHHH--HHcCCCCEEEEEcCC
Confidence 789999999999999999986543 3333322211 011234667777554
No 34
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=34.17 E-value=41 Score=28.25 Aligned_cols=24 Identities=29% Similarity=0.457 Sum_probs=21.0
Q ss_pred HHHHHHHHHHhCCCcEEEeCCCCc
Q 012560 2 LQDAVSRGITGAGLDVVQYGLAST 25 (461)
Q Consensus 2 l~~a~~~gL~s~Gi~V~~~g~~~t 25 (461)
||+.+.+-|.+.|.+|.|+|.-..
T Consensus 26 lK~~i~~~L~~~G~eV~D~G~~~~ 49 (155)
T 1o1x_A 26 LKEKVKNYLLGKGIEVEDHGTYSE 49 (155)
T ss_dssp HHHHHHHHHHHTTCEEEECCCCSS
T ss_pred HHHHHHHHHHHCCCEEEEeCCCCC
Confidence 789999999999999999986443
No 35
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=33.25 E-value=64 Score=27.30 Aligned_cols=67 Identities=10% Similarity=0.099 Sum_probs=39.1
Q ss_pred cEEEEeCCCC--CchHHHHHHHhhcCCCcccceecCCCCCCCCCCCCCCchHHHHHHHHHHHhcCCcEEEeeCCCC
Q 012560 136 FHIVVDAGNG--AGGFFAAKVLEPLGAKTSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLDNKADLGIIFDTDV 209 (461)
Q Consensus 136 lkVvvd~~~G--~~~~~~~~ll~~lg~~v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~~~adlgia~D~Dg 209 (461)
+||++-+-|+ .....+.+.|++.|.+|+. . .+ +... |...-+..-..+.+.|.+..+|+||.+.|-|
T Consensus 4 MkIaigsDhaG~~lK~~i~~~L~~~G~eV~D-~--G~---~~~~-~~~dYpd~a~~va~~V~~g~~d~GIliCGTG 72 (162)
T 2vvp_A 4 MRVYLGADHAGYELKQRIIEHLKQTGHEPID-C--GA---LRYD-ADDDYPAFCIAAATRTVADPGSLGIVLGGSG 72 (162)
T ss_dssp CEEEEEECHHHHHHHHHHHHHHHHTTCEEEE-C--SC---CSCC-TTCCHHHHHHHHHHHHHHSTTCEEEEEESSS
T ss_pred CEEEEEeCchhHHHHHHHHHHHHHCCCEEEE-e--CC---CCCC-CCCChHHHHHHHHHHHHcCCCceEEEEeCCc
Confidence 5788888775 2355777888999998762 2 11 1111 1111133334567777777777777765543
No 36
>2nml_A Enhancer of rudimentary homolog; HEF2/ERH fold, pseudo beta barrel, interaction network, transcription, cell cycle; 1.55A {Homo sapiens} SCOP: d.330.1.1 PDB: 1w9g_A 1wwq_A 1wz7_A
Probab=32.51 E-value=1.2e+02 Score=23.54 Aligned_cols=53 Identities=17% Similarity=0.093 Sum_probs=42.8
Q ss_pred EEEEEecCCCceeEEEEeeCC-HHHHHHHHHHHHHHhhc------CCCCCchHHHHHHhhC
Q 012560 408 WFLLRLSLHDPVLPLNIEAPS-REDAVKLGLAVAAATKE------FPALDTSALDKFVQAF 461 (461)
Q Consensus 408 w~liRpSgTeP~irvy~Ea~~-~~~a~~l~~~~~~~v~~------~~~~~~~~~~~~~~~~ 461 (461)
-+||.|+ ..|-=|.|++=.| .+..+-++.-|.+.+++ -+.-|+++|=+|+..+
T Consensus 5 ILLvQp~-~~~~sRTy~DyeSv~~~megiC~iYE~~LK~~nP~~~~ItYdI~~Lf~fID~l 64 (104)
T 2nml_A 5 ILLVQPT-KRPEGRTYADYESVNECMEGVCKMYEEHLKRMNPNSPSITYDISQLFDFIDDL 64 (104)
T ss_dssp EEEEECS-SCGGGCEEEEESSHHHHHHHHHHHHHHHHHHHSTTCSSCCCCHHHHHHHHHHS
T ss_pred EEEEecC-CCCCcceeeccccHHHHHHHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhcc
Confidence 4788888 7788899999877 44567899999998886 3678999999998653
No 37
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=30.38 E-value=49 Score=27.57 Aligned_cols=23 Identities=22% Similarity=0.403 Sum_probs=20.6
Q ss_pred HHHHHHHHHHhCCCcEEEeCCCC
Q 012560 2 LQDAVSRGITGAGLDVVQYGLAS 24 (461)
Q Consensus 2 l~~a~~~gL~s~Gi~V~~~g~~~ 24 (461)
||+.+.+-|.+.|.+|.|+|..+
T Consensus 15 lK~~i~~~L~~~G~eV~D~G~~~ 37 (149)
T 2vvr_A 15 LKHEIVAHLVERGVEVIDKGTWS 37 (149)
T ss_dssp GHHHHHHHHHHTTCEEEECCCCS
T ss_pred HHHHHHHHHHHCCCEEEEeCCCC
Confidence 78999999999999999998644
No 38
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=27.44 E-value=40 Score=23.03 Aligned_cols=30 Identities=13% Similarity=0.032 Sum_probs=25.5
Q ss_pred ceeEEEEeeCCHHHHHHHHHHHHHHhhcCC
Q 012560 418 PVLPLNIEAPSREDAVKLGLAVAAATKEFP 447 (461)
Q Consensus 418 P~irvy~Ea~~~~~a~~l~~~~~~~v~~~~ 447 (461)
|+++|.+++.+.+.-++|.+.+.+.+.+.+
T Consensus 1 P~I~I~~~grt~eqK~~L~~~it~~~~~~l 30 (62)
T 3m20_A 1 PVLIVYGPKLDVGKKREFVERLTSVAAEIY 30 (62)
T ss_dssp CEEEEECSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHHHHh
Confidence 789999977999999999999888887644
No 39
>1jwq_A N-acetylmuramoyl-L-alanine amidase CWLV; open alpha-beta-alpha, hydrolase; 1.80A {Paenibacillus polymyxa} SCOP: c.56.5.6
Probab=25.81 E-value=82 Score=26.91 Aligned_cols=23 Identities=13% Similarity=0.198 Sum_probs=16.8
Q ss_pred HHHHHHHHHhcCCcEEEeeCCCC
Q 012560 187 MKAIIQAVLDNKADLGIIFDTDV 209 (461)
Q Consensus 187 l~~l~~~v~~~~adlgia~D~Dg 209 (461)
|.+-.+.+.+.++|+-|.+=.|+
T Consensus 61 L~~R~~~an~~~adlfiSiH~Na 83 (179)
T 1jwq_A 61 LKQRVKVAENLKANVFVSIHANS 83 (179)
T ss_dssp HHHHHHHHHHTTCSEEEEEEEEC
T ss_pred HHHHHHHHHhhCCCEEEEEccCC
Confidence 45556677788999988875554
No 40
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=25.48 E-value=85 Score=28.87 Aligned_cols=57 Identities=21% Similarity=0.385 Sum_probs=30.8
Q ss_pred EEEEeCCCCC----------ch-----HHHHHHHhhcCCC--cccceecCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 012560 137 HIVVDAGNGA----------GG-----FFAAKVLEPLGAK--TSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVL 195 (461)
Q Consensus 137 kVvvd~~~G~----------~~-----~~~~~ll~~lg~~--v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~ 195 (461)
.|++||.|+. ++ ..+....-.+|++ ++ +.|..||-... ..+..-.++.|..+.+.++
T Consensus 178 pVivD~sH~~q~p~G~s~hs~g~~~~~~~ia~aava~Ga~G~mI-E~H~~pd~al~-Dg~qsl~p~~l~~l~~~i~ 251 (267)
T 2nwr_A 178 KVIYDATHSVQLPGGLGDKSGGMREFIFPLIRAAVAVGCDGVFM-ETHPEPEKALS-DASTQLPLSQLEGIIEAIL 251 (267)
T ss_dssp EEEEETTGGGCCTTC------CCGGGHHHHHHHHHHHCCSEEEE-EEESCGGGCSS-CTTTCEEGGGHHHHHHHHH
T ss_pred CEEEcCCcccccCCCcCcCCCCchhHHHHHHHHHHHcCCCEEEE-EecCCcccCCC-ccccCCCHHHHHHHHHHHH
Confidence 8999999994 33 2333333467886 34 45666655554 2333333444555554444
No 41
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=25.04 E-value=57 Score=21.81 Aligned_cols=31 Identities=26% Similarity=0.229 Sum_probs=25.3
Q ss_pred ceeEEEE-eeCCHHHHHHHHHHHHHHhhcCCC
Q 012560 418 PVLPLNI-EAPSREDAVKLGLAVAAATKEFPA 448 (461)
Q Consensus 418 P~irvy~-Ea~~~~~a~~l~~~~~~~v~~~~~ 448 (461)
|.++|++ ++.+.+.-+++.+.+.+.+.+.+.
T Consensus 1 P~i~I~~~~grs~e~k~~l~~~i~~~l~~~lg 32 (62)
T 1otf_A 1 PIAQLYIIEGRTDEQKETLIRQVSEAMANSLD 32 (62)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhC
Confidence 7889985 778999989999998888876543
No 42
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=24.65 E-value=66 Score=27.19 Aligned_cols=22 Identities=14% Similarity=0.333 Sum_probs=19.9
Q ss_pred HHHHHHHHHHhCCCcEEEeCCC
Q 012560 2 LQDAVSRGITGAGLDVVQYGLA 23 (461)
Q Consensus 2 l~~a~~~gL~s~Gi~V~~~g~~ 23 (461)
||+.+.+-|.+.|.+|.|+|..
T Consensus 17 lK~~i~~~L~~~G~eV~D~G~~ 38 (162)
T 2vvp_A 17 LKQRIIEHLKQTGHEPIDCGAL 38 (162)
T ss_dssp HHHHHHHHHHHTTCEEEECSCC
T ss_pred HHHHHHHHHHHCCCEEEEeCCC
Confidence 7899999999999999999843
No 43
>3ulb_A Target of rapamycin complex 2 subunit AVO1; PH domain, membrane localization, membrane protein; 1.90A {Saccharomyces cerevisiae} PDB: 3ulc_A
Probab=24.22 E-value=1e+02 Score=24.61 Aligned_cols=50 Identities=14% Similarity=0.062 Sum_probs=33.8
Q ss_pred ccCceEEE--ecCe-EEEE-EecCCCceeEEEEeeCCHHHHHHHHHHHHHHhhcC
Q 012560 396 NYEGVRVS--GSGG-WFLL-RLSLHDPVLPLNIEAPSREDAVKLGLAVAAATKEF 446 (461)
Q Consensus 396 ~~dGlki~--~~~~-w~li-RpSgTeP~irvy~Ea~~~~~a~~l~~~~~~~v~~~ 446 (461)
.+=|.|.. .+.. .+.| |-+++|. =|-+.||.+.+.|.++...++..+..+
T Consensus 63 ~Vv~~K~s~k~P~~FKivV~k~~~~e~-KrYdfEA~s~~ea~EIV~~ik~~~~~Y 116 (121)
T 3ulb_A 63 QVVLVKKSKRVPEHFKIFVRREGQDDI-KRYYFEAVSGQECTEIVTRLQNLLSAY 116 (121)
T ss_dssp GEEEEEECSSCTTEEEEEECCTTCSSC-EEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecccCCCcEEEEEEccCCCCc-ceeEEEeCCHHHHHHHHHHHHHHHHHh
Confidence 34456665 2333 3344 3235555 688999999999999999988877643
No 44
>2qn6_B Translation initiation factor 2 alpha subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus} SCOP: d.58.51.1 PDB: 2qmu_B* 3qsy_B*
Probab=23.30 E-value=1e+02 Score=23.36 Aligned_cols=30 Identities=7% Similarity=0.111 Sum_probs=26.0
Q ss_pred CceeEEEEeeCCHHHHHHHHHHHHHHhhcC
Q 012560 417 DPVLPLNIEAPSREDAVKLGLAVAAATKEF 446 (461)
Q Consensus 417 eP~irvy~Ea~~~~~a~~l~~~~~~~v~~~ 446 (461)
-|..||-+.+.|.+.+++.++...+.+.+.
T Consensus 51 aP~Y~i~~~~~D~k~ge~~L~~ai~~i~~~ 80 (93)
T 2qn6_B 51 APRYRVDVVGTNPKEASEALNQIISNLIKI 80 (93)
T ss_dssp TTEEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEecCHHHHHHHHHHHHHHHHHH
Confidence 399999999999999999998887777653
No 45
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=22.83 E-value=41 Score=31.17 Aligned_cols=60 Identities=15% Similarity=0.130 Sum_probs=36.8
Q ss_pred CcEEEEeCCCCCch----HHHHHHHhhcCCC--cccceecCCCCCCCCCCCCCCchHHHHHHHHHHHh
Q 012560 135 GFHIVVDAGNGAGG----FFAAKVLEPLGAK--TSGSQFLEPDGMFPNHIPNPEDKTAMKAIIQAVLD 196 (461)
Q Consensus 135 ~lkVvvd~~~G~~~----~~~~~ll~~lg~~--v~~~~~~~~d~~f~~~~p~P~~~~~l~~l~~~v~~ 196 (461)
++.|++||.|+.+. ..++..--.+|++ ++ +.|..||-... ..+..-.++.+..+.+.+++
T Consensus 207 ~lpVi~dssH~~g~~~~~~~~~~aAva~Ga~Gl~I-E~H~~~d~a~~-D~~~sl~p~~~~~lv~~i~~ 272 (276)
T 1vs1_A 207 HLPVIVDPSHPAGRRSLVPALAKAGLAAGADGLIV-EVHPNPEEALS-DAKQQLTPGEFARLMGELRW 272 (276)
T ss_dssp SSCEEECCHHHHCSGGGHHHHHHHHHHTTCSEEEE-EBCSSGGGCSS-CGGGCBCHHHHHHHHHHHHH
T ss_pred CCCEEEeCCCCCCccchHHHHHHHHHHcCCCEEEE-EecCCcccCCC-chhcCCCHHHHHHHHHHHHH
Confidence 45688999998774 3444455668988 66 45666665554 33434445556666665554
No 46
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=22.65 E-value=68 Score=21.97 Aligned_cols=31 Identities=29% Similarity=0.467 Sum_probs=25.3
Q ss_pred ceeEEEE-eeCCHHHHHHHHHHHHHHhhcCCC
Q 012560 418 PVLPLNI-EAPSREDAVKLGLAVAAATKEFPA 448 (461)
Q Consensus 418 P~irvy~-Ea~~~~~a~~l~~~~~~~v~~~~~ 448 (461)
|.++|++ ++.+.+.-++|.+.+.+.+.+.+.
T Consensus 1 P~i~I~~~~Grs~eqk~~L~~~it~~~~~~lg 32 (65)
T 3ry0_A 1 PLIRVTLLEGRSPQEVAALGEALTAAAHETLG 32 (65)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHHHHC
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhC
Confidence 7888875 779999999999999888877543
No 47
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=22.28 E-value=74 Score=21.16 Aligned_cols=31 Identities=26% Similarity=0.323 Sum_probs=25.3
Q ss_pred ceeEEEE-eeCCHHHHHHHHHHHHHHhhcCCC
Q 012560 418 PVLPLNI-EAPSREDAVKLGLAVAAATKEFPA 448 (461)
Q Consensus 418 P~irvy~-Ea~~~~~a~~l~~~~~~~v~~~~~ 448 (461)
|.++|++ ++.+.+.-+++.+.+.+.+.+.+.
T Consensus 1 P~i~i~~~~grs~eqk~~l~~~i~~~l~~~lg 32 (61)
T 2opa_A 1 PYVTVKMLEGRTDEQKRNLVEKVTEAVKETTG 32 (61)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHHHHC
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhC
Confidence 7889985 778999889999998888877543
No 48
>2hc5_A ORF 99, hypothetical protein YVYC; NESG, GFT-PSI, protein structure initiative, northeast structural genomics consortium, alpha-beta, FLAG; NMR {Bacillus subtilis} SCOP: d.352.1.1
Probab=22.23 E-value=1.5e+02 Score=23.45 Aligned_cols=51 Identities=10% Similarity=0.227 Sum_probs=39.6
Q ss_pred hHHHHHHHHHHHhcCCcEEEeeCCCCceeEE--EcC-CC---ccccchhHHHHHHHH
Q 012560 184 KTAMKAIIQAVLDNKADLGIIFDTDVDRSAA--VDS-TG---HELNRNRLIALMSAI 234 (461)
Q Consensus 184 ~~~l~~l~~~v~~~~adlgia~D~DgDR~~~--vd~-~G---~~l~~d~~~~L~~~~ 234 (461)
..+.+.+-+.+...+.+|=|.+|.+.+|+.+ +|. +| +-|.+++++.|.+..
T Consensus 41 ~~av~~lN~~~~~~n~~L~F~vdee~~~~vVkVvD~~TgEVIRqIPpEe~L~l~~~l 97 (117)
T 2hc5_A 41 AEMVGEMNKLLEPSQVHLKFELHDKLNEYYVKVIEDSTNEVIREIPPKRWLDFYAAM 97 (117)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEEEEETTEEEEEEEETTTTEEEEEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCceEEEEecCCCcEEEEEEECCCCcEEEeCChHHHHHHHHHH
Confidence 3455666667777888999999999999977 564 57 568889999887765
No 49
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=21.17 E-value=58 Score=27.11 Aligned_cols=28 Identities=14% Similarity=0.256 Sum_probs=21.3
Q ss_pred cEEEEeCCCCC--chHHHHHHHhhcCCCcc
Q 012560 136 FHIVVDAGNGA--GGFFAAKVLEPLGAKTS 163 (461)
Q Consensus 136 lkVvvd~~~G~--~~~~~~~ll~~lg~~v~ 163 (461)
.||++-+-|+- -...+.+.|++.|.+|+
T Consensus 8 mkI~igsDhaG~~lK~~i~~~L~~~G~eV~ 37 (148)
T 4em8_A 8 KRVFLSSDHAGVELRLFLSAYLRDLGCEVF 37 (148)
T ss_dssp SEEEEEECGGGHHHHHHHHHHHHHTTCEEE
T ss_pred eEEEEEECchhHHHHHHHHHHHHHCCCEEE
Confidence 47999888863 34567778899999876
Done!