Query 012563
Match_columns 460
No_of_seqs 130 out of 1462
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 11:53:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012563.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012563hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 3.1E-70 1.1E-74 541.2 33.3 434 9-459 8-454 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 3.1E-64 1.1E-68 508.1 33.7 438 12-460 6-480 (482)
3 2vch_A Hydroquinone glucosyltr 100.0 5.1E-62 1.7E-66 490.4 40.3 438 9-459 1-469 (480)
4 2c1x_A UDP-glucose flavonoid 3 100.0 3.6E-61 1.2E-65 481.1 33.3 429 14-459 7-452 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 6.8E-59 2.3E-63 465.9 36.3 423 13-458 8-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 2E-44 7E-49 359.0 29.4 385 12-457 10-420 (424)
7 4amg_A Snogd; transferase, pol 100.0 7.6E-45 2.6E-49 359.2 23.4 354 13-454 21-396 (400)
8 1iir_A Glycosyltransferase GTF 100.0 7.9E-43 2.7E-47 346.4 22.2 374 15-455 1-397 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 5.7E-42 1.9E-46 340.4 16.9 367 15-453 1-395 (416)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 2.5E-40 8.4E-45 328.6 27.0 375 12-458 18-413 (415)
11 3ia7_A CALG4; glycosysltransfe 100.0 1.8E-39 6.2E-44 320.8 27.6 372 15-458 5-398 (402)
12 3h4t_A Glycosyltransferase GTF 100.0 6.2E-40 2.1E-44 324.2 21.2 361 15-457 1-381 (404)
13 2yjn_A ERYCIII, glycosyltransf 100.0 7.1E-39 2.4E-43 320.5 25.1 368 14-458 20-435 (441)
14 2p6p_A Glycosyl transferase; X 100.0 3.1E-38 1.1E-42 310.2 26.0 350 15-458 1-379 (384)
15 2iyf_A OLED, oleandomycin glyc 100.0 1.1E-37 3.6E-42 311.1 28.6 371 14-456 7-397 (430)
16 3oti_A CALG3; calicheamicin, T 100.0 9.1E-37 3.1E-41 301.2 23.2 356 6-457 12-396 (398)
17 4fzr_A SSFS6; structural genom 100.0 2.8E-36 9.7E-41 297.7 20.9 352 11-453 12-395 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 9.4E-35 3.2E-39 286.1 19.8 349 14-457 1-387 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 7.3E-33 2.5E-37 274.4 26.5 362 6-458 12-408 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 6.3E-30 2.1E-34 248.6 23.7 308 14-420 2-325 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 6.7E-27 2.3E-31 202.2 14.9 159 261-437 9-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 2.7E-20 9.3E-25 180.7 24.8 337 14-460 6-357 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.7 1E-15 3.4E-20 141.4 18.7 116 272-402 156-274 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 2.6E-16 9E-21 139.4 9.1 139 270-416 25-196 (224)
25 3c48_A Predicted glycosyltrans 99.5 3.3E-11 1.1E-15 119.6 27.8 370 10-459 16-424 (438)
26 3okp_A GDP-mannose-dependent a 99.5 3.5E-12 1.2E-16 124.5 20.3 346 13-460 3-379 (394)
27 3fro_A GLGA glycogen synthase; 99.4 5.5E-11 1.9E-15 117.7 28.3 379 13-460 1-430 (439)
28 2jjm_A Glycosyl transferase, g 99.4 1.1E-09 3.9E-14 106.8 30.3 352 14-459 15-384 (394)
29 3dzc_A UDP-N-acetylglucosamine 99.3 7.5E-12 2.6E-16 122.4 14.0 159 271-459 228-396 (396)
30 2gek_A Phosphatidylinositol ma 99.3 2.2E-10 7.6E-15 112.2 23.2 113 332-459 262-382 (406)
31 1v4v_A UDP-N-acetylglucosamine 99.3 6.1E-11 2.1E-15 115.2 18.9 128 272-419 197-334 (376)
32 1vgv_A UDP-N-acetylglucosamine 99.3 3.1E-11 1E-15 117.6 16.5 161 272-458 204-374 (384)
33 2iw1_A Lipopolysaccharide core 99.3 9.4E-11 3.2E-15 113.5 19.0 147 273-433 195-352 (374)
34 2r60_A Glycosyl transferase, g 99.3 8.2E-10 2.8E-14 111.5 26.5 113 332-459 334-458 (499)
35 3ot5_A UDP-N-acetylglucosamine 99.3 3.3E-11 1.1E-15 118.0 15.0 161 271-457 222-392 (403)
36 2x6q_A Trehalose-synthase TRET 99.2 1.4E-09 4.7E-14 107.1 22.5 112 332-460 292-414 (416)
37 2iuy_A Avigt4, glycosyltransfe 99.2 7.3E-10 2.5E-14 106.0 19.8 124 277-418 165-307 (342)
38 3beo_A UDP-N-acetylglucosamine 99.2 9.7E-10 3.3E-14 106.4 20.9 163 272-458 204-374 (375)
39 4hwg_A UDP-N-acetylglucosamine 99.0 5.3E-10 1.8E-14 108.5 8.9 339 15-456 10-373 (385)
40 3s28_A Sucrose synthase 1; gly 98.9 1.5E-07 5E-12 99.2 22.8 112 333-458 640-767 (816)
41 3oy2_A Glycosyltransferase B73 98.9 2.1E-07 7.1E-12 91.2 22.0 110 335-459 256-389 (413)
42 1rzu_A Glycogen synthase 1; gl 98.7 4.3E-07 1.5E-11 91.0 19.4 161 275-459 292-474 (485)
43 2qzs_A Glycogen synthase; glyc 98.7 2.3E-06 7.9E-11 85.7 23.6 111 332-459 346-475 (485)
44 2vsy_A XCC0866; transferase, g 98.7 9E-06 3.1E-10 83.1 27.2 116 333-459 434-558 (568)
45 2hy7_A Glucuronosyltransferase 98.6 7.3E-06 2.5E-10 80.1 23.0 75 332-420 264-353 (406)
46 2f9f_A First mannosyl transfer 98.6 2.1E-07 7.3E-12 79.8 9.7 131 276-420 25-163 (177)
47 2xci_A KDO-transferase, 3-deox 98.3 6.1E-05 2.1E-09 72.6 21.4 97 334-437 261-364 (374)
48 3vue_A GBSS-I, granule-bound s 98.3 0.0003 1E-08 71.1 25.4 164 276-460 329-511 (536)
49 4gyw_A UDP-N-acetylglucosamine 97.9 0.00033 1.1E-08 73.3 17.0 136 271-419 520-668 (723)
50 3qhp_A Type 1 capsular polysac 97.8 0.0001 3.5E-09 61.9 9.9 143 274-434 2-156 (166)
51 1psw_A ADP-heptose LPS heptosy 97.7 0.00033 1.1E-08 66.6 13.5 102 15-140 1-106 (348)
52 2bfw_A GLGA glycogen synthase; 97.7 0.00031 1E-08 60.8 12.0 78 334-420 96-182 (200)
53 3tov_A Glycosyl transferase fa 97.7 9.4E-05 3.2E-09 70.5 8.5 105 12-140 6-115 (349)
54 3q3e_A HMW1C-like glycosyltran 97.6 0.0014 4.9E-08 66.0 15.2 138 273-419 440-588 (631)
55 3rhz_A GTF3, nucleotide sugar 97.4 0.00034 1.2E-08 66.2 8.2 111 334-457 215-337 (339)
56 2gt1_A Lipopolysaccharide hept 96.1 0.11 3.8E-06 48.5 14.2 134 272-419 177-322 (326)
57 2x0d_A WSAF; GT4 family, trans 95.0 0.03 1E-06 54.4 6.3 78 333-419 295-379 (413)
58 1uqt_A Alpha, alpha-trehalose- 92.4 2.2 7.4E-05 42.1 14.2 103 338-459 337-453 (482)
59 3t5t_A Putative glycosyltransf 91.1 4.2 0.00014 40.0 14.4 109 334-458 353-471 (496)
60 3nb0_A Glycogen [starch] synth 89.2 1.7 5.9E-05 44.4 9.9 45 333-379 490-550 (725)
61 2x0d_A WSAF; GT4 family, trans 88.7 0.22 7.6E-06 48.2 3.1 43 9-51 41-88 (413)
62 2phj_A 5'-nucleotidase SURE; S 87.6 6 0.0002 34.9 11.2 40 15-56 2-41 (251)
63 2e6c_A 5'-nucleotidase SURE; S 85.4 17 0.00058 31.9 13.0 53 15-69 1-57 (244)
64 3mc3_A DSRE/DSRF-like family p 82.2 1.8 6.1E-05 34.3 4.9 51 1-51 2-55 (134)
65 1j9j_A Stationary phase surviV 82.0 14 0.00049 32.4 11.1 40 15-56 1-40 (247)
66 2wqk_A 5'-nucleotidase SURE; S 81.9 3.1 0.00011 36.9 6.8 37 16-55 3-40 (251)
67 3vot_A L-amino acid ligase, BL 79.7 9.8 0.00034 36.5 10.3 96 12-138 3-101 (425)
68 4dzz_A Plasmid partitioning pr 78.0 8.4 0.00029 32.4 8.3 37 15-51 1-39 (206)
69 1ccw_A Protein (glutamate muta 75.3 4.6 0.00016 32.0 5.3 39 13-51 2-40 (137)
70 1g5t_A COB(I)alamin adenosyltr 74.6 9.1 0.00031 32.4 7.2 58 14-72 28-91 (196)
71 1xmp_A PURE, phosphoribosylami 73.9 35 0.0012 27.8 12.7 142 273-442 11-165 (170)
72 3zqu_A Probable aromatic acid 72.9 5 0.00017 34.4 5.3 38 13-51 3-40 (209)
73 2yxb_A Coenzyme B12-dependent 72.6 3.5 0.00012 33.8 4.1 40 12-51 16-55 (161)
74 2q5c_A NTRC family transcripti 69.7 13 0.00044 31.4 7.2 43 93-147 129-172 (196)
75 2i2x_B MTAC, methyltransferase 69.6 7.1 0.00024 34.7 5.8 40 12-51 121-160 (258)
76 1y80_A Predicted cobalamin bin 69.5 5.8 0.0002 34.0 5.1 40 12-51 86-125 (210)
77 1sbz_A Probable aromatic acid 68.9 6 0.00021 33.5 4.9 36 15-51 1-37 (197)
78 3qjg_A Epidermin biosynthesis 67.3 6.9 0.00024 32.5 4.8 38 15-53 6-43 (175)
79 2vqe_B 30S ribosomal protein S 66.5 43 0.0015 29.5 10.0 33 115-147 158-193 (256)
80 2iz6_A Molybdenum cofactor car 66.0 34 0.0012 28.3 8.8 76 336-418 92-173 (176)
81 2gk4_A Conserved hypothetical 66.0 23 0.00078 30.8 8.1 23 30-52 31-53 (232)
82 3auf_A Glycinamide ribonucleot 64.7 19 0.00064 31.3 7.3 103 14-144 22-132 (229)
83 3ezx_A MMCP 1, monomethylamine 64.0 9 0.00031 33.0 5.1 40 12-51 90-129 (215)
84 3lqk_A Dipicolinate synthase s 63.3 11 0.00038 32.0 5.5 42 13-54 6-47 (201)
85 2jzc_A UDP-N-acetylglucosamine 62.6 63 0.0022 27.8 10.3 40 13-52 26-72 (224)
86 3sbx_A Putative uncharacterize 62.4 11 0.00037 31.7 5.2 46 4-50 3-52 (189)
87 2r8r_A Sensor protein; KDPD, P 61.7 12 0.00043 32.4 5.6 41 12-52 4-44 (228)
88 1o4v_A Phosphoribosylaminoimid 61.5 68 0.0023 26.5 11.5 140 273-441 13-164 (183)
89 1u11_A PURE (N5-carboxyaminoim 61.1 69 0.0024 26.4 10.3 141 273-442 21-175 (182)
90 3pdi_B Nitrogenase MOFE cofact 61.0 27 0.00093 33.9 8.5 86 14-141 313-399 (458)
91 1mvl_A PPC decarboxylase athal 60.7 11 0.00037 32.3 5.0 39 14-54 19-57 (209)
92 3dm5_A SRP54, signal recogniti 60.5 19 0.00066 34.7 7.2 42 13-54 99-140 (443)
93 1id1_A Putative potassium chan 60.2 6.9 0.00024 31.3 3.6 34 13-51 2-35 (153)
94 3mcu_A Dipicolinate synthase, 59.6 9.1 0.00031 32.7 4.3 38 14-52 5-43 (207)
95 3ty2_A 5'-nucleotidase SURE; s 59.5 14 0.00047 32.8 5.5 46 9-56 6-51 (261)
96 1lss_A TRK system potassium up 59.2 8 0.00027 30.0 3.7 33 13-50 3-35 (140)
97 3cio_A ETK, tyrosine-protein k 59.2 44 0.0015 30.2 9.2 40 13-52 102-143 (299)
98 4b4o_A Epimerase family protei 59.1 6.2 0.00021 35.7 3.4 33 15-51 1-33 (298)
99 1kjn_A MTH0777; hypotethical p 57.9 15 0.00051 29.3 4.8 39 13-51 5-45 (157)
100 3la6_A Tyrosine-protein kinase 57.0 71 0.0024 28.6 10.1 40 14-53 91-132 (286)
101 3rg8_A Phosphoribosylaminoimid 57.0 76 0.0026 25.6 9.5 138 274-439 3-149 (159)
102 2q5c_A NTRC family transcripti 56.3 40 0.0014 28.3 7.8 30 351-381 51-80 (196)
103 2ywr_A Phosphoribosylglycinami 54.9 22 0.00074 30.6 6.0 102 15-144 2-111 (216)
104 1mio_A Nitrogenase molybdenum 53.6 53 0.0018 32.5 9.3 35 14-53 335-369 (533)
105 1p3y_1 MRSD protein; flavoprot 52.5 11 0.00039 31.8 3.7 37 14-51 8-44 (194)
106 2ejb_A Probable aromatic acid 52.4 23 0.00079 29.7 5.6 36 15-51 2-37 (189)
107 4b4k_A N5-carboxyaminoimidazol 52.1 99 0.0034 25.4 13.6 142 273-442 22-176 (181)
108 3lp6_A Phosphoribosylaminoimid 52.0 97 0.0033 25.4 10.2 139 273-439 7-156 (174)
109 2vo1_A CTP synthase 1; pyrimid 51.7 15 0.00052 32.5 4.4 40 13-52 21-63 (295)
110 3s2u_A UDP-N-acetylglucosamine 51.4 38 0.0013 31.5 7.6 38 273-312 3-40 (365)
111 1evy_A Glycerol-3-phosphate de 50.2 8.9 0.0003 35.9 3.0 44 3-51 3-47 (366)
112 3s40_A Diacylglycerol kinase; 49.9 14 0.00046 33.7 4.1 82 274-380 11-98 (304)
113 1hdo_A Biliverdin IX beta redu 49.5 40 0.0014 27.8 6.9 33 15-51 4-36 (206)
114 2g1u_A Hypothetical protein TM 49.3 17 0.00058 29.0 4.2 33 14-51 19-51 (155)
115 1p9o_A Phosphopantothenoylcyst 49.2 16 0.00056 33.3 4.4 39 15-53 37-90 (313)
116 2c5m_A CTP synthase; cytidine 48.7 12 0.00041 32.9 3.2 39 13-51 21-62 (294)
117 4dll_A 2-hydroxy-3-oxopropiona 48.6 21 0.00072 32.7 5.2 35 11-50 28-62 (320)
118 3dfz_A SIRC, precorrin-2 dehyd 48.5 15 0.0005 31.8 3.8 142 271-438 30-185 (223)
119 3llv_A Exopolyphosphatase-rela 48.2 12 0.00043 29.2 3.2 33 14-51 6-38 (141)
120 3zq6_A Putative arsenical pump 48.1 18 0.0006 33.3 4.6 46 7-52 5-52 (324)
121 3czc_A RMPB; alpha/beta sandwi 47.6 16 0.00056 27.4 3.6 44 6-49 10-55 (110)
122 1qzu_A Hypothetical protein MD 47.3 17 0.0006 30.9 4.1 41 13-54 18-59 (206)
123 3kjh_A CO dehydrogenase/acetyl 47.0 13 0.00044 32.3 3.4 38 15-52 1-38 (254)
124 3av3_A Phosphoribosylglycinami 46.9 37 0.0013 29.0 6.2 102 15-144 4-113 (212)
125 1f0y_A HCDH, L-3-hydroxyacyl-C 46.6 12 0.0004 34.0 3.1 42 3-50 5-46 (302)
126 4hb9_A Similarities with proba 46.5 12 0.00041 35.3 3.3 31 14-49 1-31 (412)
127 2lnd_A De novo designed protei 46.4 22 0.00074 24.7 3.6 50 369-418 49-100 (112)
128 3l4e_A Uncharacterized peptida 46.3 56 0.0019 27.6 7.2 45 263-307 18-62 (206)
129 3o1l_A Formyltetrahydrofolate 46.2 60 0.0021 29.4 7.7 105 12-144 103-212 (302)
130 3nrb_A Formyltetrahydrofolate 46.1 87 0.003 28.1 8.7 105 12-144 86-196 (287)
131 2l2q_A PTS system, cellobiose- 45.9 28 0.00097 26.0 4.7 38 13-50 3-40 (109)
132 1g63_A Epidermin modifying enz 45.5 17 0.00059 30.2 3.7 39 15-54 3-41 (181)
133 2r85_A PURP protein PF1517; AT 45.2 19 0.00064 32.9 4.3 32 14-51 2-33 (334)
134 2raf_A Putative dinucleotide-b 44.8 32 0.0011 29.1 5.5 34 13-51 18-51 (209)
135 3dfu_A Uncharacterized protein 44.5 16 0.00054 31.8 3.4 33 13-50 5-37 (232)
136 4ds3_A Phosphoribosylglycinami 43.9 46 0.0016 28.3 6.2 105 12-144 5-117 (209)
137 3tqr_A Phosphoribosylglycinami 43.7 23 0.00077 30.4 4.2 104 13-144 4-114 (215)
138 1dhr_A Dihydropteridine reduct 43.4 26 0.0009 30.3 4.8 37 12-51 4-40 (241)
139 1ks9_A KPA reductase;, 2-dehyd 43.4 17 0.00058 32.4 3.7 32 15-51 1-32 (291)
140 3eag_A UDP-N-acetylmuramate:L- 43.0 23 0.00078 32.6 4.5 34 13-50 3-36 (326)
141 1jkx_A GART;, phosphoribosylgl 42.7 48 0.0017 28.2 6.2 102 15-144 1-110 (212)
142 3k96_A Glycerol-3-phosphate de 42.1 17 0.00056 34.1 3.4 40 6-51 22-61 (356)
143 2i2c_A Probable inorganic poly 41.8 9.9 0.00034 34.1 1.7 52 350-419 36-93 (272)
144 3obi_A Formyltetrahydrofolate 41.6 99 0.0034 27.7 8.4 105 12-144 87-197 (288)
145 2pju_A Propionate catabolism o 41.5 22 0.00077 30.7 3.9 29 350-381 64-92 (225)
146 2hy5_A Putative sulfurtransfer 41.1 36 0.0012 26.3 4.8 37 15-51 1-41 (130)
147 1kjq_A GART 2, phosphoribosylg 41.1 47 0.0016 31.1 6.6 42 4-51 2-43 (391)
148 3hn2_A 2-dehydropantoate 2-red 41.0 22 0.00074 32.4 4.0 32 15-51 3-34 (312)
149 3bul_A Methionine synthase; tr 40.8 29 0.00098 34.7 5.0 40 12-51 96-135 (579)
150 2ew2_A 2-dehydropantoate 2-red 40.7 19 0.00065 32.6 3.6 32 14-50 3-34 (316)
151 3lyu_A Putative hydrogenase; t 40.7 39 0.0013 26.6 5.0 34 13-48 17-50 (142)
152 3i83_A 2-dehydropantoate 2-red 40.4 20 0.00067 32.9 3.6 32 15-51 3-34 (320)
153 3ors_A N5-carboxyaminoimidazol 40.3 1.5E+02 0.005 24.0 11.3 139 274-440 4-155 (163)
154 3hwr_A 2-dehydropantoate 2-red 40.3 18 0.00061 33.1 3.3 31 13-48 18-48 (318)
155 3fwz_A Inner membrane protein 40.2 19 0.00066 28.1 3.1 33 14-51 7-39 (140)
156 2bon_A Lipid kinase; DAG kinas 40.2 63 0.0022 29.6 7.1 68 289-380 44-119 (332)
157 2b69_A UDP-glucuronate decarbo 40.0 28 0.00097 31.8 4.7 43 5-51 18-60 (343)
158 4g65_A TRK system potassium up 39.9 8.5 0.00029 37.5 1.0 34 13-51 2-35 (461)
159 3slg_A PBGP3 protein; structur 39.9 24 0.00081 32.8 4.2 63 3-69 13-77 (372)
160 1tvm_A PTS system, galactitol- 39.8 99 0.0034 23.1 7.0 38 13-50 20-58 (113)
161 3gpi_A NAD-dependent epimerase 39.8 33 0.0011 30.4 5.0 47 14-69 3-49 (286)
162 3f67_A Putative dienelactone h 39.8 45 0.0015 28.0 5.8 38 13-50 30-67 (241)
163 2ywx_A Phosphoribosylaminoimid 39.5 1.5E+02 0.005 23.8 13.5 133 276-439 2-144 (157)
164 3l77_A Short-chain alcohol deh 39.5 33 0.0011 29.3 4.9 34 14-50 1-34 (235)
165 3nbm_A PTS system, lactose-spe 39.4 26 0.00089 26.3 3.5 40 11-50 3-42 (108)
166 4eg0_A D-alanine--D-alanine li 39.4 34 0.0012 31.1 5.1 40 12-51 11-54 (317)
167 1bg6_A N-(1-D-carboxylethyl)-L 38.4 22 0.00076 32.9 3.7 32 14-50 4-35 (359)
168 4grd_A N5-CAIR mutase, phospho 38.3 1.6E+02 0.0055 24.0 11.6 142 272-442 11-166 (173)
169 1u0t_A Inorganic polyphosphate 38.3 14 0.00047 33.8 2.1 32 346-379 72-107 (307)
170 3u7q_B Nitrogenase molybdenum- 38.2 2E+02 0.0068 28.3 10.6 33 14-51 364-396 (523)
171 3e8x_A Putative NAD-dependent 38.2 37 0.0013 29.0 5.0 38 10-51 17-54 (236)
172 3ew7_A LMO0794 protein; Q8Y8U8 38.2 24 0.00083 29.6 3.7 33 15-51 1-33 (221)
173 3dqp_A Oxidoreductase YLBE; al 38.2 34 0.0012 28.9 4.6 49 15-69 1-49 (219)
174 1z82_A Glycerol-3-phosphate de 37.7 23 0.00079 32.6 3.7 32 14-50 14-45 (335)
175 2h31_A Multifunctional protein 37.6 2.7E+02 0.0093 26.4 10.9 139 272-439 264-412 (425)
176 1yt5_A Inorganic polyphosphate 37.6 12 0.00042 33.1 1.6 53 349-419 41-96 (258)
177 3lrx_A Putative hydrogenase; a 37.5 37 0.0013 27.2 4.5 37 13-52 22-58 (158)
178 1qkk_A DCTD, C4-dicarboxylate 37.3 1E+02 0.0034 23.8 7.2 59 370-433 74-132 (155)
179 3l4b_C TRKA K+ channel protien 37.1 13 0.00044 31.8 1.7 32 15-51 1-32 (218)
180 3qvo_A NMRA family protein; st 36.9 53 0.0018 28.1 5.7 34 15-51 23-57 (236)
181 3of5_A Dethiobiotin synthetase 36.9 34 0.0012 29.5 4.4 37 13-49 2-40 (228)
182 3afo_A NADH kinase POS5; alpha 36.7 28 0.00096 32.9 4.0 36 342-379 107-147 (388)
183 3d59_A Platelet-activating fac 36.7 33 0.0011 32.0 4.7 41 10-50 93-133 (383)
184 1meo_A Phosophoribosylglycinam 36.6 67 0.0023 27.3 6.1 103 15-144 1-110 (209)
185 3ic5_A Putative saccharopine d 36.4 32 0.0011 25.4 3.7 33 14-51 5-38 (118)
186 3h2s_A Putative NADH-flavin re 36.1 28 0.00094 29.5 3.7 33 15-51 1-33 (224)
187 3l7i_A Teichoic acid biosynthe 36.0 19 0.00065 37.3 3.0 108 339-457 605-718 (729)
188 3rp8_A Flavoprotein monooxygen 36.0 23 0.00078 33.5 3.4 42 4-50 13-54 (407)
189 2qv7_A Diacylglycerol kinase D 35.9 44 0.0015 30.8 5.3 81 276-380 29-115 (337)
190 4e5v_A Putative THUA-like prot 35.7 45 0.0015 29.9 5.1 39 12-51 2-43 (281)
191 3guy_A Short-chain dehydrogena 35.6 30 0.001 29.5 3.9 34 15-51 1-34 (230)
192 3kcq_A Phosphoribosylglycinami 35.5 43 0.0015 28.7 4.7 101 11-144 5-113 (215)
193 3ghy_A Ketopantoate reductase 35.5 22 0.00076 32.7 3.2 33 14-51 3-35 (335)
194 3oow_A Phosphoribosylaminoimid 35.5 1.8E+02 0.0061 23.6 13.7 142 274-443 6-160 (166)
195 2fb6_A Conserved hypothetical 35.2 34 0.0012 26.0 3.6 41 9-51 4-48 (117)
196 2an1_A Putative kinase; struct 35.2 17 0.00058 32.8 2.2 32 346-379 60-95 (292)
197 4b79_A PA4098, probable short- 34.7 1E+02 0.0035 26.8 7.1 34 15-51 11-44 (242)
198 3kuu_A Phosphoribosylaminoimid 34.7 1.9E+02 0.0064 23.6 12.1 143 274-444 13-168 (174)
199 1zi8_A Carboxymethylenebutenol 34.7 50 0.0017 27.6 5.2 38 13-50 26-63 (236)
200 3dkr_A Esterase D; alpha beta 34.7 31 0.001 29.1 3.8 37 13-49 20-56 (251)
201 3ego_A Probable 2-dehydropanto 34.5 22 0.00076 32.3 2.9 32 14-51 2-33 (307)
202 3da8_A Probable 5'-phosphoribo 34.5 18 0.0006 31.1 2.0 109 10-144 8-120 (215)
203 2dpo_A L-gulonate 3-dehydrogen 34.4 23 0.00079 32.5 3.0 36 10-50 2-37 (319)
204 3g0o_A 3-hydroxyisobutyrate de 34.4 21 0.0007 32.4 2.7 33 13-50 6-38 (303)
205 1iow_A DD-ligase, DDLB, D-ALA\ 34.2 50 0.0017 29.5 5.3 38 14-51 2-43 (306)
206 3qvl_A Putative hydantoin race 33.9 1.9E+02 0.0063 25.1 8.7 36 15-50 2-38 (245)
207 3abi_A Putative uncharacterize 33.8 34 0.0012 31.9 4.2 40 5-50 7-46 (365)
208 3cky_A 2-hydroxymethyl glutara 33.5 45 0.0015 29.8 4.9 33 13-50 3-35 (301)
209 2a33_A Hypothetical protein; s 33.3 62 0.0021 27.7 5.3 47 1-49 1-52 (215)
210 1u7z_A Coenzyme A biosynthesis 33.2 81 0.0028 27.2 6.1 24 29-52 35-58 (226)
211 1jay_A Coenzyme F420H2:NADP+ o 33.1 32 0.0011 28.9 3.6 31 15-50 1-32 (212)
212 2a33_A Hypothetical protein; s 33.1 1.2E+02 0.0041 25.8 7.1 43 336-379 94-147 (215)
213 3tov_A Glycosyl transferase fa 33.0 1.1E+02 0.0038 28.1 7.6 38 14-51 185-226 (349)
214 2etv_A Iron(III) ABC transport 32.7 35 0.0012 31.5 4.1 29 115-143 96-126 (346)
215 3doj_A AT3G25530, dehydrogenas 32.4 34 0.0012 31.0 3.8 33 13-50 20-52 (310)
216 2vns_A Metalloreductase steap3 32.4 28 0.00096 29.6 3.1 33 13-50 27-59 (215)
217 1gsa_A Glutathione synthetase; 32.3 39 0.0013 30.3 4.3 37 15-51 2-41 (316)
218 3p19_A BFPVVD8, putative blue 32.3 41 0.0014 29.6 4.3 35 14-51 15-49 (266)
219 3i4f_A 3-oxoacyl-[acyl-carrier 32.3 57 0.002 28.4 5.3 36 12-50 4-39 (264)
220 1txg_A Glycerol-3-phosphate de 32.3 24 0.00081 32.3 2.8 31 15-50 1-31 (335)
221 3qjg_A Epidermin biosynthesis 31.9 2.1E+02 0.0072 23.4 8.2 115 273-398 6-143 (175)
222 4ao6_A Esterase; hydrolase, th 31.6 47 0.0016 28.9 4.5 37 14-50 55-93 (259)
223 3n0v_A Formyltetrahydrofolate 31.6 60 0.0021 29.1 5.2 109 10-144 86-197 (286)
224 1e2b_A Enzyme IIB-cellobiose; 31.6 95 0.0032 23.0 5.5 38 14-51 3-40 (106)
225 1ehi_A LMDDL2, D-alanine:D-lac 31.5 44 0.0015 31.3 4.5 38 13-50 2-44 (377)
226 3obb_A Probable 3-hydroxyisobu 31.4 45 0.0015 30.2 4.4 30 16-50 5-34 (300)
227 3end_A Light-independent proto 31.4 50 0.0017 29.7 4.8 38 14-51 41-78 (307)
228 1psw_A ADP-heptose LPS heptosy 31.3 80 0.0027 28.7 6.3 38 14-51 180-222 (348)
229 3sty_A Methylketone synthase 1 31.2 57 0.0019 27.8 5.0 41 9-50 7-47 (267)
230 3pfb_A Cinnamoyl esterase; alp 31.0 66 0.0023 27.5 5.5 37 14-50 45-83 (270)
231 1fjh_A 3alpha-hydroxysteroid d 31.0 47 0.0016 28.7 4.5 33 15-50 1-33 (257)
232 2qs7_A Uncharacterized protein 30.9 56 0.0019 25.8 4.4 99 14-123 8-107 (144)
233 1uzm_A 3-oxoacyl-[acyl-carrier 30.9 67 0.0023 27.7 5.4 34 15-51 15-48 (247)
234 1zmt_A Haloalcohol dehalogenas 30.8 44 0.0015 29.1 4.2 33 15-50 1-33 (254)
235 1yb4_A Tartronic semialdehyde 30.8 33 0.0011 30.7 3.4 32 13-49 2-33 (295)
236 3dtt_A NADP oxidoreductase; st 30.8 40 0.0014 29.3 3.9 36 11-51 16-51 (245)
237 2wtm_A EST1E; hydrolase; 1.60A 30.8 68 0.0023 27.3 5.5 37 14-50 26-64 (251)
238 2x4g_A Nucleoside-diphosphate- 30.7 51 0.0018 29.9 4.8 36 12-51 11-46 (342)
239 1mv8_A GMD, GDP-mannose 6-dehy 30.7 44 0.0015 32.1 4.4 31 15-50 1-31 (436)
240 3nva_A CTP synthase; rossman f 30.6 50 0.0017 32.5 4.7 41 14-54 2-45 (535)
241 2uyy_A N-PAC protein; long-cha 30.2 37 0.0013 30.8 3.7 35 11-50 27-61 (316)
242 3qha_A Putative oxidoreductase 30.2 35 0.0012 30.7 3.5 32 14-50 15-46 (296)
243 2xdo_A TETX2 protein; tetracyc 30.0 37 0.0013 31.9 3.8 40 7-51 19-58 (398)
244 3pef_A 6-phosphogluconate dehy 29.9 36 0.0012 30.4 3.5 31 15-50 2-32 (287)
245 3zzm_A Bifunctional purine bio 29.9 47 0.0016 32.4 4.3 106 12-132 7-119 (523)
246 4dmm_A 3-oxoacyl-[acyl-carrier 29.9 61 0.0021 28.5 5.0 34 14-50 27-60 (269)
247 3bfv_A CAPA1, CAPB2, membrane 29.8 61 0.0021 28.7 5.0 41 12-52 79-121 (271)
248 1qgu_B Protein (nitrogenase mo 29.6 3E+02 0.01 26.9 10.3 33 14-51 360-392 (519)
249 3c1o_A Eugenol synthase; pheny 29.5 59 0.002 29.2 5.0 34 14-51 4-37 (321)
250 3lyh_A Cobalamin (vitamin B12) 29.5 1.8E+02 0.0062 21.9 7.2 38 272-309 5-42 (126)
251 3o26_A Salutaridine reductase; 29.5 58 0.002 29.0 4.9 35 14-51 11-45 (311)
252 3ug7_A Arsenical pump-driving 29.4 48 0.0016 30.7 4.4 38 15-52 26-64 (349)
253 3lou_A Formyltetrahydrofolate 29.3 87 0.003 28.2 5.9 106 11-144 92-202 (292)
254 4fbl_A LIPS lipolytic enzyme; 29.2 37 0.0012 30.0 3.4 31 18-48 54-84 (281)
255 4f0j_A Probable hydrolytic enz 29.2 58 0.002 28.5 4.8 37 14-50 45-81 (315)
256 2hmt_A YUAA protein; RCK, KTN, 29.2 30 0.001 26.6 2.6 32 15-51 7-38 (144)
257 3d7l_A LIN1944 protein; APC893 29.2 57 0.002 26.9 4.5 34 13-51 2-35 (202)
258 1nn5_A Similar to deoxythymidy 28.8 68 0.0023 26.7 5.0 44 6-49 1-44 (215)
259 2qyt_A 2-dehydropantoate 2-red 28.8 20 0.0007 32.4 1.7 33 13-50 7-45 (317)
260 1ydg_A Trp repressor binding p 28.8 72 0.0025 26.7 5.1 38 13-50 5-43 (211)
261 2pju_A Propionate catabolism o 28.7 55 0.0019 28.2 4.3 38 94-143 142-180 (225)
262 2pn1_A Carbamoylphosphate synt 28.7 72 0.0024 28.9 5.4 34 12-51 2-37 (331)
263 3ea0_A ATPase, para family; al 28.7 44 0.0015 28.6 3.8 41 13-53 2-45 (245)
264 3r5x_A D-alanine--D-alanine li 28.6 31 0.0011 31.0 2.9 39 13-51 2-44 (307)
265 2gf2_A Hibadh, 3-hydroxyisobut 28.6 36 0.0012 30.4 3.3 31 15-50 1-31 (296)
266 3h7a_A Short chain dehydrogena 28.6 62 0.0021 28.1 4.8 34 14-50 6-39 (252)
267 2yvu_A Probable adenylyl-sulfa 28.2 83 0.0028 25.5 5.3 45 6-50 5-49 (186)
268 3dhn_A NAD-dependent epimerase 28.1 77 0.0026 26.6 5.2 33 15-51 5-37 (227)
269 3fgn_A Dethiobiotin synthetase 28.1 56 0.0019 28.7 4.3 42 7-49 19-62 (251)
270 3trh_A Phosphoribosylaminoimid 28.1 2.4E+02 0.0083 22.9 12.8 138 274-439 7-157 (169)
271 1qyd_A Pinoresinol-lariciresin 28.1 63 0.0021 28.8 4.9 34 14-51 4-37 (313)
272 4ezb_A Uncharacterized conserv 28.0 37 0.0013 30.9 3.3 32 15-51 25-57 (317)
273 2h78_A Hibadh, 3-hydroxyisobut 28.0 43 0.0015 30.1 3.7 32 14-50 3-34 (302)
274 3hly_A Flavodoxin-like domain; 27.9 75 0.0025 25.4 4.8 36 15-50 1-37 (161)
275 2nm0_A Probable 3-oxacyl-(acyl 27.7 62 0.0021 28.2 4.6 33 15-50 21-53 (253)
276 3is3_A 17BETA-hydroxysteroid d 27.7 81 0.0028 27.6 5.5 34 14-50 17-50 (270)
277 2q8p_A Iron-regulated surface 27.7 85 0.0029 27.2 5.6 30 115-144 60-91 (260)
278 3f1l_A Uncharacterized oxidore 27.7 86 0.0029 27.1 5.6 34 14-50 11-44 (252)
279 2bw0_A 10-FTHFDH, 10-formyltet 27.6 76 0.0026 29.1 5.3 33 13-50 21-53 (329)
280 1imj_A CIB, CCG1-interacting f 27.6 1.1E+02 0.0036 24.8 6.0 37 14-50 31-69 (210)
281 1xrs_B D-lysine 5,6-aminomutas 27.5 33 0.0011 30.4 2.7 39 13-51 119-166 (262)
282 3c85_A Putative glutathione-re 27.4 37 0.0013 27.7 2.9 34 13-51 38-72 (183)
283 4e21_A 6-phosphogluconate dehy 27.4 41 0.0014 31.4 3.4 33 13-50 21-53 (358)
284 3g17_A Similar to 2-dehydropan 27.3 17 0.00059 32.7 0.9 33 14-51 2-34 (294)
285 1tqh_A Carboxylesterase precur 27.2 59 0.002 27.8 4.4 34 16-49 17-50 (247)
286 2gas_A Isoflavone reductase; N 27.2 57 0.0019 29.0 4.4 33 15-51 3-35 (307)
287 3uhj_A Probable glycerol dehyd 27.2 99 0.0034 29.1 6.1 89 263-380 44-139 (387)
288 4hn9_A Iron complex transport 27.1 94 0.0032 28.3 5.9 31 115-145 116-147 (335)
289 3k9g_A PF-32 protein; ssgcid, 27.0 61 0.0021 28.3 4.5 38 13-51 25-64 (267)
290 4gbj_A 6-phosphogluconate dehy 26.9 48 0.0016 29.9 3.8 30 16-50 7-36 (297)
291 2f1k_A Prephenate dehydrogenas 26.8 45 0.0015 29.5 3.6 31 15-50 1-31 (279)
292 3f6r_A Flavodoxin; FMN binding 26.5 1.7E+02 0.0059 22.5 6.7 37 15-51 2-39 (148)
293 1xq1_A Putative tropinone redu 26.5 96 0.0033 26.9 5.7 32 16-50 15-46 (266)
294 2x5n_A SPRPN10, 26S proteasome 26.4 1.1E+02 0.0037 25.4 5.7 35 17-51 110-144 (192)
295 3pfn_A NAD kinase; structural 26.4 31 0.0011 32.3 2.4 32 345-378 104-139 (365)
296 3ftp_A 3-oxoacyl-[acyl-carrier 26.4 83 0.0028 27.6 5.3 34 14-50 27-60 (270)
297 4id9_A Short-chain dehydrogena 26.2 42 0.0014 30.7 3.3 39 9-51 14-52 (347)
298 1ydh_A AT5G11950; structural g 26.2 96 0.0033 26.4 5.3 78 336-415 90-186 (216)
299 3pe6_A Monoglyceride lipase; a 26.2 70 0.0024 27.6 4.8 38 13-50 40-77 (303)
300 1e4e_A Vancomycin/teicoplanin 26.2 44 0.0015 30.7 3.5 38 13-50 2-43 (343)
301 3foj_A Uncharacterized protein 26.2 1.3E+02 0.0044 21.5 5.5 34 13-50 55-88 (100)
302 3qua_A Putative uncharacterize 26.1 1E+02 0.0034 26.0 5.3 38 12-50 20-61 (199)
303 2fx5_A Lipase; alpha-beta hydr 26.1 55 0.0019 28.2 4.0 37 14-50 48-84 (258)
304 3ox4_A Alcohol dehydrogenase 2 26.1 78 0.0027 29.7 5.2 43 263-307 22-64 (383)
305 3fkq_A NTRC-like two-domain pr 26.1 59 0.002 30.4 4.3 40 12-51 140-181 (373)
306 1jx7_A Hypothetical protein YC 26.0 76 0.0026 23.5 4.3 27 25-51 15-43 (117)
307 3e48_A Putative nucleoside-dip 25.9 65 0.0022 28.4 4.5 51 15-69 1-52 (289)
308 1rpn_A GDP-mannose 4,6-dehydra 25.8 65 0.0022 29.1 4.6 36 12-51 12-47 (335)
309 3qsg_A NAD-binding phosphogluc 25.8 34 0.0012 31.1 2.5 34 12-50 22-56 (312)
310 2pk3_A GDP-6-deoxy-D-LYXO-4-he 25.8 55 0.0019 29.4 4.0 36 13-51 10-45 (321)
311 3ip0_A 2-amino-4-hydroxy-6-hyd 25.7 84 0.0029 25.3 4.6 27 275-301 2-28 (158)
312 2y0c_A BCEC, UDP-glucose dehyd 25.5 42 0.0014 32.7 3.3 34 13-51 7-40 (478)
313 3q0i_A Methionyl-tRNA formyltr 25.5 1.1E+02 0.0037 27.9 5.9 34 13-51 6-39 (318)
314 1fmt_A Methionyl-tRNA FMet for 25.5 91 0.0031 28.4 5.4 35 12-51 1-35 (314)
315 4gi5_A Quinone reductase; prot 25.4 1.1E+02 0.0037 27.3 5.8 38 12-49 20-60 (280)
316 3qrx_B Melittin; calcium-bindi 25.4 18 0.00061 18.7 0.3 17 360-376 1-17 (26)
317 1i36_A Conserved hypothetical 25.4 32 0.0011 30.1 2.3 29 15-48 1-29 (264)
318 3nyw_A Putative oxidoreductase 25.4 65 0.0022 27.9 4.3 35 13-50 5-39 (250)
319 3r6d_A NAD-dependent epimerase 25.3 66 0.0023 27.0 4.3 34 15-51 5-39 (221)
320 2r6j_A Eugenol synthase 1; phe 25.2 65 0.0022 28.9 4.4 32 16-51 13-44 (318)
321 2c5a_A GDP-mannose-3', 5'-epim 25.2 1.4E+02 0.0048 27.6 6.9 34 14-51 29-62 (379)
322 3gg2_A Sugar dehydrogenase, UD 25.0 44 0.0015 32.3 3.3 32 15-51 3-34 (450)
323 3bxp_A Putative lipase/esteras 25.0 88 0.003 27.0 5.2 40 11-50 31-73 (277)
324 2d1p_B TUSC, hypothetical UPF0 24.9 1.3E+02 0.0044 22.6 5.4 36 16-51 4-41 (119)
325 1mxh_A Pteridine reductase 2; 24.8 75 0.0026 27.8 4.7 32 16-50 12-43 (276)
326 3g79_A NDP-N-acetyl-D-galactos 24.8 73 0.0025 31.0 4.8 36 13-53 17-54 (478)
327 1y1p_A ARII, aldehyde reductas 24.8 90 0.0031 28.1 5.4 35 12-50 9-43 (342)
328 3alj_A 2-methyl-3-hydroxypyrid 24.8 47 0.0016 30.9 3.4 33 13-50 10-42 (379)
329 3psh_A Protein HI_1472; substr 24.8 69 0.0024 29.0 4.5 30 115-144 84-115 (326)
330 3ppi_A 3-hydroxyacyl-COA dehyd 24.7 90 0.0031 27.4 5.2 33 15-50 30-62 (281)
331 2dkn_A 3-alpha-hydroxysteroid 24.7 82 0.0028 26.9 4.9 33 15-50 1-33 (255)
332 2i87_A D-alanine-D-alanine lig 24.6 40 0.0014 31.3 2.9 39 13-51 2-44 (364)
333 3sju_A Keto reductase; short-c 24.6 75 0.0026 28.1 4.6 34 14-50 23-56 (279)
334 3eme_A Rhodanese-like domain p 24.4 1.2E+02 0.0041 21.8 5.0 34 13-50 55-88 (103)
335 3imf_A Short chain dehydrogena 24.4 89 0.0031 27.1 5.0 34 15-51 6-39 (257)
336 1vpd_A Tartronate semialdehyde 24.3 78 0.0027 28.2 4.7 31 15-50 6-36 (299)
337 2ahr_A Putative pyrroline carb 24.2 49 0.0017 28.8 3.3 33 13-50 2-34 (259)
338 3tzq_B Short-chain type dehydr 24.2 95 0.0032 27.2 5.2 36 13-51 9-44 (271)
339 1xfi_A Unknown protein; struct 24.2 77 0.0026 29.6 4.6 39 13-51 211-250 (367)
340 3pdu_A 3-hydroxyisobutyrate de 24.1 50 0.0017 29.4 3.4 31 15-50 2-32 (287)
341 3o38_A Short chain dehydrogena 24.1 83 0.0028 27.4 4.8 35 15-51 22-56 (266)
342 3t7c_A Carveol dehydrogenase; 24.0 91 0.0031 27.8 5.1 39 9-50 22-60 (299)
343 4g6h_A Rotenone-insensitive NA 24.0 43 0.0015 32.9 3.0 35 12-51 40-74 (502)
344 3o1l_A Formyltetrahydrofolate 24.0 2.2E+02 0.0074 25.7 7.5 119 287-432 166-286 (302)
345 3l6e_A Oxidoreductase, short-c 23.9 85 0.0029 26.8 4.7 33 15-50 3-35 (235)
346 1ooe_A Dihydropteridine reduct 23.9 88 0.003 26.6 4.8 33 16-51 4-36 (236)
347 1o4v_A Phosphoribosylaminoimid 23.8 3.1E+02 0.01 22.6 7.9 100 287-418 53-157 (183)
348 3c24_A Putative oxidoreductase 23.8 60 0.002 28.9 3.8 32 14-50 11-43 (286)
349 3ko8_A NAD-dependent epimerase 23.7 1.6E+02 0.0054 26.1 6.8 33 15-51 1-33 (312)
350 4e5s_A MCCFLIKE protein (BA_56 23.7 95 0.0032 28.5 5.2 27 287-313 63-89 (331)
351 3qit_A CURM TE, polyketide syn 23.7 80 0.0027 26.8 4.6 35 16-50 27-61 (286)
352 3bdi_A Uncharacterized protein 23.7 67 0.0023 26.0 3.9 38 13-50 25-64 (207)
353 4egs_A Ribose 5-phosphate isom 23.6 61 0.0021 26.8 3.5 39 11-49 31-70 (180)
354 3l6d_A Putative oxidoreductase 23.6 37 0.0013 30.7 2.3 33 13-50 8-40 (306)
355 4e3z_A Putative oxidoreductase 23.6 85 0.0029 27.5 4.8 35 13-50 24-58 (272)
356 1rkx_A CDP-glucose-4,6-dehydra 23.6 81 0.0028 28.8 4.8 34 14-51 9-42 (357)
357 2fuk_A XC6422 protein; A/B hyd 23.5 1.2E+02 0.004 24.9 5.5 36 15-50 37-77 (220)
358 1f4p_A Flavodoxin; electron tr 23.5 66 0.0022 25.0 3.6 36 15-50 1-37 (147)
359 2o6l_A UDP-glucuronosyltransfe 23.1 2E+02 0.0069 22.6 6.7 38 14-51 20-60 (170)
360 3se7_A VANA; alpha-beta struct 23.1 54 0.0018 30.2 3.4 39 13-51 2-44 (346)
361 3obi_A Formyltetrahydrofolate 23.1 1.5E+02 0.005 26.6 6.1 117 289-432 153-271 (288)
362 3d3j_A Enhancer of mRNA-decapp 23.0 66 0.0023 29.2 3.9 34 15-51 133-168 (306)
363 4h15_A Short chain alcohol deh 23.0 92 0.0031 27.4 4.8 34 14-50 10-43 (261)
364 1f9y_A HPPK, protein (6-hydrox 23.0 1E+02 0.0035 24.8 4.6 28 275-302 2-29 (158)
365 2lpm_A Two-component response 22.9 31 0.0011 26.4 1.5 38 96-142 43-86 (123)
366 3f8d_A Thioredoxin reductase ( 22.8 50 0.0017 29.5 3.1 33 14-51 15-47 (323)
367 1vco_A CTP synthetase; tetrame 22.7 73 0.0025 31.6 4.4 47 5-51 2-51 (550)
368 1lld_A L-lactate dehydrogenase 22.6 43 0.0015 30.4 2.6 34 13-51 6-41 (319)
369 3q9l_A Septum site-determining 22.6 85 0.0029 27.0 4.5 37 16-52 3-41 (260)
370 2qx0_A 7,8-dihydro-6-hydroxyme 22.6 1.4E+02 0.0048 24.0 5.3 28 275-302 3-30 (159)
371 3uve_A Carveol dehydrogenase ( 22.6 94 0.0032 27.4 4.9 39 9-50 5-43 (286)
372 2qk4_A Trifunctional purine bi 22.5 2E+02 0.0068 27.4 7.6 33 14-51 24-57 (452)
373 3rkr_A Short chain oxidoreduct 22.5 1E+02 0.0034 26.8 5.0 32 16-50 30-61 (262)
374 1jfr_A Lipase; serine hydrolas 22.5 66 0.0022 27.6 3.8 38 13-50 52-89 (262)
375 1pzg_A LDH, lactate dehydrogen 22.5 43 0.0015 30.8 2.6 36 11-51 6-42 (331)
376 3nrb_A Formyltetrahydrofolate 22.3 1.7E+02 0.0058 26.2 6.4 116 290-432 153-270 (287)
377 3l18_A Intracellular protease 22.3 1.8E+02 0.0062 23.0 6.2 38 13-51 1-38 (168)
378 2jk1_A HUPR, hydrogenase trans 22.3 2.1E+02 0.0071 21.3 6.4 48 370-419 71-119 (139)
379 1pno_A NAD(P) transhydrogenase 22.2 88 0.003 25.4 3.9 39 13-51 22-63 (180)
380 2o2g_A Dienelactone hydrolase; 22.2 1.1E+02 0.0037 25.0 5.0 37 14-50 34-72 (223)
381 3ucx_A Short chain dehydrogena 22.1 1.3E+02 0.0045 26.1 5.7 34 14-50 10-43 (264)
382 3gk3_A Acetoacetyl-COA reducta 22.1 94 0.0032 27.1 4.7 42 5-50 16-57 (269)
383 3trd_A Alpha/beta hydrolase; c 22.1 1.3E+02 0.0045 24.3 5.5 37 14-50 30-71 (208)
384 2z1m_A GDP-D-mannose dehydrata 22.1 84 0.0029 28.4 4.6 34 14-51 3-36 (345)
385 3rm3_A MGLP, thermostable mono 21.9 81 0.0028 26.9 4.3 36 15-50 40-75 (270)
386 4fs3_A Enoyl-[acyl-carrier-pro 21.9 96 0.0033 27.0 4.7 36 15-51 6-41 (256)
387 1e7w_A Pteridine reductase; di 21.9 95 0.0033 27.6 4.8 32 15-49 9-40 (291)
388 3kkl_A Probable chaperone prot 21.8 1.5E+02 0.0051 25.7 5.8 37 15-51 4-51 (244)
389 3kcn_A Adenylate cyclase homol 21.8 2E+02 0.0068 21.9 6.3 47 370-419 75-123 (151)
390 1d4o_A NADP(H) transhydrogenas 21.8 90 0.0031 25.4 3.9 38 14-51 22-62 (184)
391 2qjw_A Uncharacterized protein 21.7 82 0.0028 24.7 4.0 33 17-49 6-40 (176)
392 2d1p_A TUSD, hypothetical UPF0 21.7 1.4E+02 0.0047 23.4 5.1 38 14-51 12-53 (140)
393 1udb_A Epimerase, UDP-galactos 21.7 87 0.003 28.3 4.6 32 15-50 1-32 (338)
394 3l9w_A Glutathione-regulated p 21.7 54 0.0018 31.2 3.1 35 12-51 2-36 (413)
395 3v2h_A D-beta-hydroxybutyrate 21.6 87 0.003 27.7 4.4 33 15-50 25-57 (281)
396 1ta9_A Glycerol dehydrogenase; 21.5 1.2E+02 0.0041 29.2 5.6 91 263-380 82-178 (450)
397 3vtz_A Glucose 1-dehydrogenase 21.4 1.1E+02 0.0039 26.7 5.1 37 12-51 11-47 (269)
398 1g3q_A MIND ATPase, cell divis 21.3 96 0.0033 26.3 4.5 37 16-52 3-41 (237)
399 3rd5_A Mypaa.01249.C; ssgcid, 21.3 2E+02 0.0067 25.4 6.8 33 16-51 17-49 (291)
400 2q37_A OHCU decarboxylase; 2-O 21.3 2.5E+02 0.0085 23.1 6.7 53 383-436 117-170 (181)
401 1l5x_A SurviVal protein E; str 21.3 1.2E+02 0.0042 27.0 5.2 40 15-56 1-40 (280)
402 3i1j_A Oxidoreductase, short c 21.2 1.9E+02 0.0065 24.5 6.5 34 15-51 14-47 (247)
403 4eso_A Putative oxidoreductase 21.2 1.1E+02 0.0036 26.6 4.9 33 15-50 8-40 (255)
404 3u7q_A Nitrogenase molybdenum- 21.2 83 0.0028 30.7 4.4 24 115-141 417-441 (492)
405 3s55_A Putative short-chain de 21.2 94 0.0032 27.3 4.6 34 15-51 10-43 (281)
406 1js1_X Transcarbamylase; alpha 21.1 1.2E+02 0.004 27.7 5.1 37 15-51 169-205 (324)
407 3vps_A TUNA, NAD-dependent epi 21.1 69 0.0024 28.6 3.7 34 14-51 7-40 (321)
408 1wcv_1 SOJ, segregation protei 21.1 71 0.0024 27.8 3.7 40 13-52 4-45 (257)
409 3ia7_A CALG4; glycosysltransfe 21.1 1.8E+02 0.0061 26.7 6.8 36 274-311 6-41 (402)
410 3ka7_A Oxidoreductase; structu 21.1 54 0.0019 30.9 3.1 31 15-50 1-31 (425)
411 3vis_A Esterase; alpha/beta-hy 21.0 1.1E+02 0.0038 27.1 5.1 36 14-49 95-130 (306)
412 3md9_A Hemin-binding periplasm 21.0 84 0.0029 27.2 4.1 28 115-142 59-89 (255)
413 2c20_A UDP-glucose 4-epimerase 21.0 1.4E+02 0.0049 26.6 5.9 33 15-51 2-34 (330)
414 1weh_A Conserved hypothetical 21.0 1E+02 0.0035 25.1 4.3 35 16-50 3-41 (171)
415 2zki_A 199AA long hypothetical 21.0 95 0.0032 25.6 4.3 36 14-50 4-40 (199)
416 4e12_A Diketoreductase; oxidor 20.9 71 0.0024 28.4 3.7 32 14-50 4-35 (283)
417 3gem_A Short chain dehydrogena 20.9 75 0.0026 27.8 3.8 33 16-51 28-60 (260)
418 1t35_A Hypothetical protein YV 20.9 1E+02 0.0034 25.7 4.3 34 16-49 3-40 (191)
419 1t1j_A Hypothetical protein; s 20.9 1.2E+02 0.0042 23.2 4.5 34 13-46 6-47 (125)
420 3hh1_A Tetrapyrrole methylase 20.9 72 0.0025 24.0 3.2 13 37-49 74-86 (117)
421 1gy8_A UDP-galactose 4-epimera 20.8 1E+02 0.0034 28.6 4.9 33 14-50 2-35 (397)
422 2pzm_A Putative nucleotide sug 20.8 89 0.003 28.2 4.4 35 13-51 19-53 (330)
423 1cp2_A CP2, nitrogenase iron p 20.8 91 0.0031 27.1 4.4 36 16-51 3-38 (269)
424 2l82_A Designed protein OR32; 20.8 2.2E+02 0.0074 21.0 5.4 34 275-312 3-36 (162)
425 3evt_A Phosphoglycerate dehydr 20.7 2.6E+02 0.009 25.4 7.5 66 272-362 137-202 (324)
426 3grp_A 3-oxoacyl-(acyl carrier 20.7 1.4E+02 0.0049 26.0 5.6 33 15-50 27-59 (266)
427 2v4n_A Multifunctional protein 20.7 1.4E+02 0.0049 26.1 5.4 41 14-56 1-41 (254)
428 3sbx_A Putative uncharacterize 20.6 3E+02 0.01 22.8 7.1 43 336-379 93-146 (189)
429 1kyq_A Met8P, siroheme biosynt 20.6 3.7E+02 0.013 23.7 8.2 37 404-440 172-211 (274)
430 3ado_A Lambda-crystallin; L-gu 20.6 46 0.0016 30.5 2.3 37 9-50 1-37 (319)
431 3sc4_A Short chain dehydrogena 20.5 1.1E+02 0.0037 27.1 4.8 34 15-51 9-42 (285)
432 3n7t_A Macrophage binding prot 20.5 1.7E+02 0.0057 25.4 5.9 37 15-51 10-57 (247)
433 3lf2_A Short chain oxidoreduct 20.4 1.1E+02 0.0038 26.6 4.9 33 15-50 8-40 (265)
434 4iin_A 3-ketoacyl-acyl carrier 20.4 1.1E+02 0.0038 26.7 4.9 32 16-50 30-61 (271)
435 1tht_A Thioesterase; 2.10A {Vi 20.4 79 0.0027 28.3 3.9 35 15-49 35-69 (305)
436 4dqx_A Probable oxidoreductase 20.3 1E+02 0.0035 27.2 4.6 33 15-50 27-59 (277)
437 1ydh_A AT5G11950; structural g 20.3 1.5E+02 0.0052 25.2 5.4 35 16-50 11-49 (216)
438 1yqg_A Pyrroline-5-carboxylate 20.3 44 0.0015 29.2 2.1 31 15-50 1-32 (263)
439 4da9_A Short-chain dehydrogena 20.2 1.3E+02 0.0043 26.6 5.2 34 14-50 28-61 (280)
440 3m1a_A Putative dehydrogenase; 20.2 1.2E+02 0.004 26.6 5.0 34 15-51 5-38 (281)
441 4egf_A L-xylulose reductase; s 20.2 1.2E+02 0.0041 26.4 5.0 33 15-50 20-52 (266)
442 4fn4_A Short chain dehydrogena 20.1 1E+02 0.0035 27.0 4.4 33 15-50 7-39 (254)
443 3hn7_A UDP-N-acetylmuramate-L- 20.1 84 0.0029 31.0 4.3 33 14-50 19-51 (524)
444 3kkj_A Amine oxidase, flavin-c 20.1 55 0.0019 27.9 2.7 28 17-49 5-32 (336)
445 1wma_A Carbonyl reductase [NAD 20.0 1.2E+02 0.0042 26.1 5.1 35 14-51 3-38 (276)
446 3rih_A Short chain dehydrogena 20.0 1.5E+02 0.0051 26.4 5.7 34 15-51 41-74 (293)
447 3ijr_A Oxidoreductase, short c 20.0 1E+02 0.0035 27.4 4.6 34 15-51 47-80 (291)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=3.1e-70 Score=541.16 Aligned_cols=434 Identities=27% Similarity=0.462 Sum_probs=355.1
Q ss_pred cCCCCCcEEEEEcCCCCCChHHHHHHHHHHHhCC--CeEEEEeCCCCCCCC-----CCCCCceEEeCCCCCCCCCCCC--
Q 012563 9 ISPRNGRRVILFPLPFQGHINPMLQLGSILYSKG--FSITIIHTKFNSPNS-----CNYPHFDFHSISDGLTDPSAED-- 79 (460)
Q Consensus 9 ~~~~~~~~il~~~~~~~GHv~p~l~lA~~L~~rG--h~V~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-- 79 (460)
|...++.||+++|+|++||++|++.||+.|+++| +.|||++++.+.... ...++++|+.+|++++++.+..
T Consensus 8 M~~~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ipdglp~~~~~~~~ 87 (454)
T 3hbf_A 8 MNGNNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVHDGLPKGYVSSGN 87 (454)
T ss_dssp ----CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECCCCCCTTCCCCSC
T ss_pred ccCCCCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecCCCCCCCccccCC
Confidence 6667789999999999999999999999999999 999999986332211 1135799999999888765443
Q ss_pred HHHHHHHHHHhcchhHHHHHHHHhhcCCCCCCCCCCceEEEEcCcchHHH-HHhhcCCCeEEEeCccHHHHHHHhhcccc
Q 012563 80 STTILITLNAKCMVPFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQFTH-VADEFKLPTIILQTHSVSGYLGIAAYPFL 158 (460)
Q Consensus 80 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~~~~-~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 158 (460)
....+..+.+.+...+++.++++.....+ ++||||+|.++.|+. +|+++|||++.++++++..++.+.+.+..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~ 161 (454)
T 3hbf_A 88 PREPIFLFIKAMQENFKHVIDEAVAETGK------NITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLI 161 (454)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHCC------CCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCC------CCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHH
Confidence 33444555555555677777776544333 799999999999999 99999999999999999998887765443
Q ss_pred cccCCC-CCCCCCCCCccCCCCCCCCCCCCCccc-CCCCCcHHHHHHHHhhhccCceEEecchHHhhHHHhhcCccccCC
Q 012563 159 RDKGYV-PIQDPQSESPVIEYPPLRVKDIPKLET-RYPEYNYPLVSAMVNNIKASSGMIWNTFEELEQAALSTLPEEYSG 236 (460)
Q Consensus 159 ~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~ 236 (460)
...... ..........+|+++.++.++++.... .....+...+.+..+.+..++++++||+++||++.++.+++. +
T Consensus 162 ~~~~~~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~-~- 239 (454)
T 3hbf_A 162 REKTGSKEVHDVKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSK-F- 239 (454)
T ss_dssp HHTCCHHHHTTSSCBCCSTTSCCBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTT-S-
T ss_pred HhhcCCCccccccccccCCCCCCcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhc-C-
Confidence 322110 001111123478888889999886553 223345667777888889999999999999999999988886 3
Q ss_pred CCceeecccccCCCCCCCCccccccchhhhhccCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEECCCCCCC
Q 012563 237 IPVFPIGPFHKYFPASSSSLLSQDQSSISWLDKQAPKSVIYVSFGSVAAINETEFLEIAWGLANSRVPFLWVVRPGLVDG 316 (460)
Q Consensus 237 ~pv~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~ 316 (460)
+++++|||++..... ...+++.++.+||+.++++++|||||||+...+.+++.+++.++++++++|||+++...
T Consensus 240 ~~v~~vGPl~~~~~~---~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~~--- 313 (454)
T 3hbf_A 240 KLLLNVGPFNLTTPQ---RKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDP--- 313 (454)
T ss_dssp SCEEECCCHHHHSCC---SCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSCH---
T ss_pred CCEEEECCccccccc---ccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcc---
Confidence 469999999875432 12234556899999988899999999999998899999999999999999999998764
Q ss_pred chhhccCchhHHhhhCCCceEEeccchHHHhccCCCcceeeccCchhhHHHHhhCCCeeecCcccchhhHHHHHHHhhce
Q 012563 317 VEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPAVGGFLTHSGWNSTLESICEGVPMICQPCLADQMVNARYVSHVWRV 396 (460)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~ 396 (460)
...+|+++.++.++|+++++|+||.++|+|+++++|||||||||++|++++|||+|++|+++||+.||+++++.+|+
T Consensus 314 ---~~~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~ 390 (454)
T 3hbf_A 314 ---KEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEI 390 (454)
T ss_dssp ---HHHSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCS
T ss_pred ---hhcCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCe
Confidence 34589999999999999999999999999999888999999999999999999999999999999999999985599
Q ss_pred eEeeCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHhc
Q 012563 397 GLHLEG-KLEKKEIETAIRRLMVEAEGQEMRERITCLKKNVDACLRQGGSSHQALGRLVDHILS 459 (460)
Q Consensus 397 G~~~~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (460)
|+.++. .++.++|.++|+++|+++++++||+||+++++.+++++++||||.++++++++.+.+
T Consensus 391 Gv~l~~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~~ 454 (454)
T 3hbf_A 391 GVGVDNGVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVTS 454 (454)
T ss_dssp EEECGGGSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHTC
T ss_pred eEEecCCCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHhC
Confidence 999987 899999999999999885456899999999999999999999999999999999864
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=3.1e-64 Score=508.12 Aligned_cols=438 Identities=32% Similarity=0.674 Sum_probs=336.0
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCC---------CCCceEEeCCCCCCCCC---C--
Q 012563 12 RNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNSPNSCN---------YPHFDFHSISDGLTDPS---A-- 77 (460)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~---~-- 77 (460)
++++||+++|+|++||++|++.||++|++|||+|||++++.+...... .++++|+.+|++++... .
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~ 85 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVS 85 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcc
Confidence 456899999999999999999999999999999999998744321111 14899999997766521 1
Q ss_pred CCHHHHHHHHHHhcchhHHHHHHHHhhcC-CCCCCCCCCceEEEEcCcchHHH-HHhhcCCCeEEEeCccHHHHHHHhhc
Q 012563 78 EDSTTILITLNAKCMVPFRNCLAKLVSNT-NNNNAQEDSVACLITDFLWQFTH-VADEFKLPTIILQTHSVSGYLGIAAY 155 (460)
Q Consensus 78 ~~~~~~~~~~~~~~~~~l~~~l~~l~~~~-~~~~~~~~~pDlvI~D~~~~~~~-~A~~lgiP~v~~~~~~~~~~~~~~~~ 155 (460)
.+...++..+...+...+++.++.+.... +. ++||||+|.++.|+. +|+++|||++.++++++.....+.++
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~------~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~ 159 (482)
T 2pq6_A 86 QDVPTLCQSVRKNFLKPYCELLTRLNHSTNVP------PVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHF 159 (482)
T ss_dssp CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSC------CCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTH
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHhhhccCC------CceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHH
Confidence 11334444444455666666666664320 12 799999999999999 99999999999999998877666555
Q ss_pred ccccccCCCCCCCC---------CCCCccCCCCCCCCCCCCCcccCC--CCCcHHHHHHHHhhhccCceEEecchHHhhH
Q 012563 156 PFLRDKGYVPIQDP---------QSESPVIEYPPLRVKDIPKLETRY--PEYNYPLVSAMVNNIKASSGMIWNTFEELEQ 224 (460)
Q Consensus 156 ~~~~~~~~~p~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~ 224 (460)
+.+...++.|.... ...+.+++++.++..+++...... .......+.+..+...+++++++||+++||+
T Consensus 160 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~ 239 (482)
T 2pq6_A 160 RSFVERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELES 239 (482)
T ss_dssp HHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGH
T ss_pred HHHHhcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhH
Confidence 55555566654321 111234555555555555333111 2223444455666778889999999999999
Q ss_pred HHhhcCccccCCCCceeecccccC-CCC-------C-CCCccccccchhhhhccCCCCeEEEEEecccccCCHHHHHHHH
Q 012563 225 AALSTLPEEYSGIPVFPIGPFHKY-FPA-------S-SSSLLSQDQSSISWLDKQAPKSVIYVSFGSVAAINETEFLEIA 295 (460)
Q Consensus 225 ~~~~~~~~~~~~~pv~~vGpl~~~-~~~-------~-~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~ 295 (460)
+.++.+++. + .++++|||++.. ... . ....++.+.++.+|++.++++++|||||||....+.+++..++
T Consensus 240 ~~~~~~~~~-~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~ 317 (482)
T 2pq6_A 240 DVINALSST-I-PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFA 317 (482)
T ss_dssp HHHHHHHTT-C-TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHH
T ss_pred HHHHHHHHh-C-CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHH
Confidence 998888887 5 569999999863 111 0 0011244556899999988899999999999887888899999
Q ss_pred HHHHhCCCCEEEEECCCCCCCchhhccCchhHHhhhCCCceEEeccchHHHhccCCCcceeeccCchhhHHHHhhCCCee
Q 012563 296 WGLANSRVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPAVGGFLTHSGWNSTLESICEGVPMI 375 (460)
Q Consensus 296 ~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~v 375 (460)
.++++.+++|+|+++.+...+. ...+|+++.++.++|+++++|+||.++|+|+++++||||||+||++|++++|||+|
T Consensus 318 ~~l~~~~~~~l~~~~~~~~~~~--~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i 395 (482)
T 2pq6_A 318 WGLANCKKSFLWIIRPDLVIGG--SVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPML 395 (482)
T ss_dssp HHHHHTTCEEEEECCGGGSTTT--GGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEE
T ss_pred HHHHhcCCcEEEEEcCCccccc--cccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEE
Confidence 9999999999999986432111 12378888888899999999999999999999999999999999999999999999
Q ss_pred ecCcccchhhHHHHHH-HhhceeEeeCCccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 012563 376 CQPCLADQMVNARYVS-HVWRVGLHLEGKLEKKEIETAIRRLMVEAEGQEMRERITCLKKNVDACLRQGGSSHQALGRLV 454 (460)
Q Consensus 376 ~~P~~~DQ~~na~~v~-~~lG~G~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 454 (460)
++|+++||+.||++++ + +|+|+.++..++.++|.++|+++|+|+++++||+||+++++.+++++.+||||.+++++++
T Consensus 396 ~~P~~~dQ~~na~~~~~~-~G~g~~l~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v 474 (482)
T 2pq6_A 396 CWPFFADQPTDCRFICNE-WEIGMEIDTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVI 474 (482)
T ss_dssp ECCCSTTHHHHHHHHHHT-SCCEEECCSSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHH
T ss_pred ecCcccchHHHHHHHHHH-hCEEEEECCCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Confidence 9999999999999997 6 6999999767899999999999999843447999999999999999999999999999999
Q ss_pred HHHhcC
Q 012563 455 DHILSF 460 (460)
Q Consensus 455 ~~~~~~ 460 (460)
+.+.++
T Consensus 475 ~~~~~~ 480 (482)
T 2pq6_A 475 KDVLLK 480 (482)
T ss_dssp HHTTCC
T ss_pred HHHHhc
Confidence 988653
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=5.1e-62 Score=490.41 Aligned_cols=438 Identities=27% Similarity=0.432 Sum_probs=322.7
Q ss_pred cCCCCCcEEEEEcCCCCCChHHHHHHHHHHHhC-CCeEEEEeCCCC--CCCCCC-----CCCceEEeCCCCCCCCCC--C
Q 012563 9 ISPRNGRRVILFPLPFQGHINPMLQLGSILYSK-GFSITIIHTKFN--SPNSCN-----YPHFDFHSISDGLTDPSA--E 78 (460)
Q Consensus 9 ~~~~~~~~il~~~~~~~GHv~p~l~lA~~L~~r-Gh~V~~~~~~~~--~~~~~~-----~~~~~~~~~~~~~~~~~~--~ 78 (460)
|+..+++||+++|+|+.||++|+++||++|++| ||+|||++++.+ ...... ..+++|+.+|+...+... .
T Consensus 1 M~~~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~ 80 (480)
T 2vch_A 1 MEESKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVDLTDLSSST 80 (480)
T ss_dssp -----CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCCCTTSCTTC
T ss_pred CCCCCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCCCCCCCCCch
Confidence 455677999999999999999999999999998 999999999753 221111 258999999864221111 1
Q ss_pred CHHHHHHHHHHhcchhHHHHHHHHhhcCCCCCCCCCCc-eEEEEcCcchHHH-HHhhcCCCeEEEeCccHHHHHHHhhcc
Q 012563 79 DSTTILITLNAKCMVPFRNCLAKLVSNTNNNNAQEDSV-ACLITDFLWQFTH-VADEFKLPTIILQTHSVSGYLGIAAYP 156 (460)
Q Consensus 79 ~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~p-DlvI~D~~~~~~~-~A~~lgiP~v~~~~~~~~~~~~~~~~~ 156 (460)
.....+......+...+++.++.+.. .. ++ |+||+|.++.|+. +|+++|||++.++++++.....+.+++
T Consensus 81 ~~~~~~~~~~~~~~~~l~~ll~~~~~--~~------~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~ 152 (480)
T 2vch_A 81 RIESRISLTVTRSNPELRKVFDSFVE--GG------RLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLP 152 (480)
T ss_dssp CHHHHHHHHHHTTHHHHHHHHHHHHH--TT------CCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhhhHHHHHHHHHhcc--CC------CCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHH
Confidence 23232323334444556666666532 11 67 9999999999999 999999999999999988766655433
Q ss_pred cccccCCCCCCCCCCCCccCCCCCCCCCCCCCcccCCCCCcHHHHHHHHhhhccCceEEecchHHhhHHHhhcCcc---c
Q 012563 157 FLRDKGYVPIQDPQSESPVIEYPPLRVKDIPKLETRYPEYNYPLVSAMVNNIKASSGMIWNTFEELEQAALSTLPE---E 233 (460)
Q Consensus 157 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~---~ 233 (460)
........+.........+|+++++...+++.....+.......+.+..+.+++..++++|++.+||+..+..+++ .
T Consensus 153 ~~~~~~~~~~~~~~~~~~~Pg~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~ 232 (480)
T 2vch_A 153 KLDETVSCEFRELTEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLD 232 (480)
T ss_dssp HHHHHCCSCGGGCSSCBCCTTCCCBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTT
T ss_pred HHHhcCCCcccccCCcccCCCCCCCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccC
Confidence 2221111111000111234555555555555433222222334444555666778889999999999876665442 2
Q ss_pred cCCCCceeecccccCCCCCCCCccccccchhhhhccCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEECCCC
Q 012563 234 YSGIPVFPIGPFHKYFPASSSSLLSQDQSSISWLDKQAPKSVIYVSFGSVAAINETEFLEIAWGLANSRVPFLWVVRPGL 313 (460)
Q Consensus 234 ~~~~pv~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~ 313 (460)
+ .++++|||++..... ....+.+.++.+|++.++++++|||||||+...+.+++.+++.+++.++++|||+++...
T Consensus 233 -~-~~v~~vGpl~~~~~~--~~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~ 308 (480)
T 2vch_A 233 -K-PPVYPVGPLVNIGKQ--EAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPS 308 (480)
T ss_dssp -C-CCEEECCCCCCCSCS--CC-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCC
T ss_pred -C-CcEEEEecccccccc--ccCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCcc
Confidence 2 469999999865321 000123456899999988899999999999988889999999999999999999998754
Q ss_pred CCC---------chhh-ccCchhHHhhhCCCceEEe-ccchHHHhccCCCcceeeccCchhhHHHHhhCCCeeecCcccc
Q 012563 314 VDG---------VEWL-EALPKGYLEMVDGRGYIVQ-WAPQQQVLAHPAVGGFLTHSGWNSTLESICEGVPMICQPCLAD 382 (460)
Q Consensus 314 ~~~---------~~~~-~~~~~~~~~~~~~~~~~~~-~vp~~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~v~~P~~~D 382 (460)
..+ .... ..+|+++.++..++++++. |+||.+||+|+++++||||||+||++||+++|||||++|+++|
T Consensus 309 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~D 388 (480)
T 2vch_A 309 GIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAE 388 (480)
T ss_dssp SSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTT
T ss_pred ccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEecccccc
Confidence 211 0112 3589999999888888876 9999999999998889999999999999999999999999999
Q ss_pred hhhHHHHH-HHhhceeEeeCC----ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 012563 383 QMVNARYV-SHVWRVGLHLEG----KLEKKEIETAIRRLMVEAEGQEMRERITCLKKNVDACLRQGGSSHQALGRLVDHI 457 (460)
Q Consensus 383 Q~~na~~v-~~~lG~G~~~~~----~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 457 (460)
|+.||+++ ++ +|+|+.++. .++.++|.++|+++|+++++++||+||+++++.+++++.+||++.++++++++.+
T Consensus 389 Q~~na~~l~~~-~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~ 467 (480)
T 2vch_A 389 QKMNAVLLSED-IRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKW 467 (480)
T ss_dssp HHHHHHHHHHT-TCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHH
T ss_pred chHHHHHHHHH-hCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 99999997 67 799999964 4899999999999998433489999999999999999999999999999999987
Q ss_pred hc
Q 012563 458 LS 459 (460)
Q Consensus 458 ~~ 459 (460)
++
T Consensus 468 ~~ 469 (480)
T 2vch_A 468 KA 469 (480)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=3.6e-61 Score=481.13 Aligned_cols=429 Identities=27% Similarity=0.480 Sum_probs=325.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCe--EEEEeCCCCCCC-----CC-CCCCceEEeCCCCCCCCCCC--CHHHH
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFS--ITIIHTKFNSPN-----SC-NYPHFDFHSISDGLTDPSAE--DSTTI 83 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~--V~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~--~~~~~ 83 (460)
++||+++|+|++||++|+++||+.|++|||. |||++++..... .. ...+++|+.+++++++..+. .....
T Consensus 7 ~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~~glp~~~~~~~~~~~~ 86 (456)
T 2c1x_A 7 NPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISDGVPEGYVFAGRPQED 86 (456)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECCCCCCTTCCCCCCTTHH
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCCCCCCCcccccCChHHH
Confidence 5799999999999999999999999999755 577887421110 11 12579999999877765321 12333
Q ss_pred HHHHHHhcchhHHHHHHHHhhcCCCCCCCCCCceEEEEcCcchHHH-HHhhcCCCeEEEeCccHHHHHHHhhccccccc-
Q 012563 84 LITLNAKCMVPFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQFTH-VADEFKLPTIILQTHSVSGYLGIAAYPFLRDK- 161 (460)
Q Consensus 84 ~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~~~~-~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~- 161 (460)
+..+...+...+++.++++.+..+. +||+||+|.++.|+. +|+++|||+|.++++++.....+.+.+.....
T Consensus 87 ~~~~~~~~~~~~~~~l~~l~~~~~~------~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 160 (456)
T 2c1x_A 87 IELFTRAAPESFRQGMVMAVAETGR------PVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKI 160 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTC------CCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHHHHHHhccCC------CceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhcc
Confidence 3334344444455666655432122 899999999999999 99999999999999988766554332221110
Q ss_pred CCCCC-C-CCCCCCccCCCCCCCCCCCCCccc--CCCCCcHHHHHHHHhhhccCceEEecchHHhhHHHhhcCccccCCC
Q 012563 162 GYVPI-Q-DPQSESPVIEYPPLRVKDIPKLET--RYPEYNYPLVSAMVNNIKASSGMIWNTFEELEQAALSTLPEEYSGI 237 (460)
Q Consensus 162 ~~~p~-~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~ 237 (460)
.+.+. . .......+++++.++..+++.... .....+...+.+..+...+++++++||+++||++.++.+++. + +
T Consensus 161 ~~~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~-~-~ 238 (456)
T 2c1x_A 161 GVSGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSK-L-K 238 (456)
T ss_dssp CSSCCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHH-S-S
T ss_pred CCcccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhc-C-C
Confidence 11110 0 011112356666666666654221 111223344555556667889999999999999888888876 4 4
Q ss_pred CceeecccccCCCCCCCCccccccchhhhhccCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEECCCCCCCc
Q 012563 238 PVFPIGPFHKYFPASSSSLLSQDQSSISWLDKQAPKSVIYVSFGSVAAINETEFLEIAWGLANSRVPFLWVVRPGLVDGV 317 (460)
Q Consensus 238 pv~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~ 317 (460)
++++|||++..... ..++.+.++.+|++.++++++|||||||......+++..++.+++..+++|+|+++...
T Consensus 239 ~~~~vGpl~~~~~~---~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~---- 311 (456)
T 2c1x_A 239 TYLNIGPFNLITPP---PVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKA---- 311 (456)
T ss_dssp CEEECCCHHHHC------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGGG----
T ss_pred CEEEecCcccCccc---ccccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCcc----
Confidence 69999999875432 11334456889999888899999999999988888999999999999999999998653
Q ss_pred hhhccCchhHHhhhCCCceEEeccchHHHhccCCCcceeeccCchhhHHHHhhCCCeeecCcccchhhHHHHHHHhhcee
Q 012563 318 EWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPAVGGFLTHSGWNSTLESICEGVPMICQPCLADQMVNARYVSHVWRVG 397 (460)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G 397 (460)
...+|+++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||+|++|+++||+.||+++++.||+|
T Consensus 312 --~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g 389 (456)
T 2c1x_A 312 --RVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIG 389 (456)
T ss_dssp --GGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCE
T ss_pred --hhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeE
Confidence 234788888888899999999999999999998889999999999999999999999999999999999999944999
Q ss_pred EeeCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHhc
Q 012563 398 LHLEG-KLEKKEIETAIRRLMVEAEGQEMRERITCLKKNVDACLRQGGSSHQALGRLVDHILS 459 (460)
Q Consensus 398 ~~~~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (460)
+.++. .++.++|.++|+++|+|+++++||+||+++++.+++++.+||||.++++++++.+.+
T Consensus 390 ~~l~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 390 VRIEGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSK 452 (456)
T ss_dssp EECGGGSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTS
T ss_pred EEecCCCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHh
Confidence 99976 799999999999999884455899999999999999999999999999999998864
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=6.8e-59 Score=465.90 Aligned_cols=423 Identities=27% Similarity=0.492 Sum_probs=320.2
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCCCCC-C--------CCCCCceEEeCCCCCCCCCC--CC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSK--GFSITIIHTKFNSPN-S--------CNYPHFDFHSISDGLTDPSA--ED 79 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~r--Gh~V~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~--~~ 79 (460)
+++||+++|+|++||++|+++||+.|++| ||+|||++++.+... . ....+++|+.+|++..+..+ ..
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~~~~~ 87 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPPPQELLKS 87 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCCCCCGGGGGS
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCCCCcccccCC
Confidence 46899999999999999999999999999 999999999765321 0 11258999999965222211 11
Q ss_pred HHHHHHHHHHhcchhHHHHHHHHhhcCCCCCCCCCCceEEEEcCcchHHH-HHhhcCCCeEEEeCccHHHHHHHhhcccc
Q 012563 80 STTILITLNAKCMVPFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQFTH-VADEFKLPTIILQTHSVSGYLGIAAYPFL 158 (460)
Q Consensus 80 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~~~~-~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 158 (460)
....+......+...+++.++++ . .. +||+||+|.++.|+. +|+++|||++.++++++.....+.+++..
T Consensus 88 ~~~~~~~~~~~~~~~~~~ll~~~-~--~~------~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 158 (463)
T 2acv_A 88 PEFYILTFLESLIPHVKATIKTI-L--SN------KVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNR 158 (463)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHH-C--CT------TEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGS
T ss_pred ccHHHHHHHHhhhHHHHHHHHhc-c--CC------CCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhh
Confidence 11112222334444555566554 1 12 899999999999999 99999999999999998877666554432
Q ss_pred cccCCCCCCCCCC---CCccCCC-CCCCCCCCCCcccCCCCCcHHHHHHHHhhhccCceEEecchHHhhHHHhhcCcccc
Q 012563 159 RDKGYVPIQDPQS---ESPVIEY-PPLRVKDIPKLETRYPEYNYPLVSAMVNNIKASSGMIWNTFEELEQAALSTLPEEY 234 (460)
Q Consensus 159 ~~~~~~p~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~ 234 (460)
... .+...... ...+|++ +++...+++.....+ ......+.+..+..+.++++++||+++||+..+..+++.
T Consensus 159 ~~~--~~~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~- 234 (463)
T 2acv_A 159 QIE--EVFDDSDRDHQLLNIPGISNQVPSNVLPDACFNK-DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDH- 234 (463)
T ss_dssp CTT--CCCCCSSGGGCEECCTTCSSCEEGGGSCHHHHCT-TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHH-
T ss_pred ccc--CCCCCccccCceeECCCCCCCCChHHCchhhcCC-chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhc-
Confidence 211 11111111 2235565 555555555322222 234445555566677888999999999998876665543
Q ss_pred C--CCCceeecccccCCC-CCCCCccccccchhhhhccCCCCeEEEEEecccc-cCCHHHHHHHHHHHHhCCCCEEEEEC
Q 012563 235 S--GIPVFPIGPFHKYFP-ASSSSLLSQDQSSISWLDKQAPKSVIYVSFGSVA-AINETEFLEIAWGLANSRVPFLWVVR 310 (460)
Q Consensus 235 ~--~~pv~~vGpl~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~-~~~~~~~~~~~~al~~~~~~~i~~~~ 310 (460)
. ++++++|||++.... ......++.+.++.+|++.++++++|||||||+. ..+.+++..++.+++..+++|||+++
T Consensus 235 ~~p~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~ 314 (463)
T 2acv_A 235 DEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNS 314 (463)
T ss_dssp CTTSCCEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECC
T ss_pred cccCCcEEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEEC
Confidence 2 356999999986532 1000001233468999999888999999999999 77888899999999999999999998
Q ss_pred CCCCCCchhhccCchhHHhhh--CCCceEEeccchHHHhccCCCcceeeccCchhhHHHHhhCCCeeecCcccchhhHHH
Q 012563 311 PGLVDGVEWLEALPKGYLEMV--DGRGYIVQWAPQQQVLAHPAVGGFLTHSGWNSTLESICEGVPMICQPCLADQMVNAR 388 (460)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~v~~P~~~DQ~~na~ 388 (460)
.+. ..+|+++.++. ++|+++++|+||.++|.|+++++||||||+||++|++++|||+|++|+++||+.||+
T Consensus 315 ~~~-------~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~ 387 (463)
T 2acv_A 315 AEK-------KVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAF 387 (463)
T ss_dssp CCG-------GGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHH
T ss_pred CCc-------ccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHH
Confidence 641 23677887777 789999999999999999999999999999999999999999999999999999999
Q ss_pred HH-HHhhceeEee-C----C--ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHh
Q 012563 389 YV-SHVWRVGLHL-E----G--KLEKKEIETAIRRLMVEAEGQEMRERITCLKKNVDACLRQGGSSHQALGRLVDHIL 458 (460)
Q Consensus 389 ~v-~~~lG~G~~~-~----~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (460)
++ ++ +|+|+.+ + . .++.++|.++|+++|+++ ++||+||+++++.+++++.+||||.++++++++.+.
T Consensus 388 ~lv~~-~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~--~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 388 RLVKE-WGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKD--SIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 462 (463)
T ss_dssp HHHHT-SCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTT--CTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred HHHHH-cCeEEEEecccCCCCccccHHHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhc
Confidence 95 78 7999999 3 3 489999999999999731 689999999999999999999999999999999874
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=2e-44 Score=358.97 Aligned_cols=385 Identities=17% Similarity=0.200 Sum_probs=263.4
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCCCCCCCCC------CCHHHHHH
Q 012563 12 RNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNSPNSCNYPHFDFHSISDGLTDPSA------EDSTTILI 85 (460)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 85 (460)
.+.|||+++++++.||++|+++||++|+++||+|+|++++...+... ..|++|+++++.++.... .+....+.
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVK-AAGATPVVYDSILPKESNPEESWPEDQESAMG 88 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHH-HHTCEEEECCCCSCCTTCTTCCCCSSHHHHHH
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHH-hCCCEEEecCccccccccchhhcchhHHHHHH
Confidence 34589999999999999999999999999999999999864432222 347899999865443211 12233333
Q ss_pred HHHHhcchhHHHHHHHHhhcCCCCCCCCCCceEEEEcCcchHHH-HHhhcCCCeEEEeCccHHHHHHHhhcccccccCC-
Q 012563 86 TLNAKCMVPFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQFTH-VADEFKLPTIILQTHSVSGYLGIAAYPFLRDKGY- 163 (460)
Q Consensus 86 ~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~~~~-~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~- 163 (460)
.+...+... .+.+.++.+.. +||+||+|.+..++. +|+++|||++.+++.+..........+.. ...+
T Consensus 89 ~~~~~~~~~-~~~l~~~l~~~--------~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~-~~~~~ 158 (424)
T 2iya_A 89 LFLDEAVRV-LPQLEDAYADD--------RPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAV-QDPTA 158 (424)
T ss_dssp HHHHHHHHH-HHHHHHHTTTS--------CCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGG-SCCCC
T ss_pred HHHHHHHHH-HHHHHHHHhcc--------CCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccccccccc-ccccc
Confidence 333222222 22333333322 899999999888888 99999999999987764211111000000 0000
Q ss_pred -------CCCCCCCCCCccCCCCCCCCCCCCCcccCCCCCcHHHHHHHHh----------hhccCceEEecchHHhhHHH
Q 012563 164 -------VPIQDPQSESPVIEYPPLRVKDIPKLETRYPEYNYPLVSAMVN----------NIKASSGMIWNTFEELEQAA 226 (460)
Q Consensus 164 -------~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~s~~~le~~~ 226 (460)
.|...... . .+. ...+.. ......+.+... .....+.++++++++|+++
T Consensus 159 ~~~~~~~~~~~~~~~----~---~~~-~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~- 224 (424)
T 2iya_A 159 DRGEEAAAPAGTGDA----E---EGA-EAEDGL-----VRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIK- 224 (424)
T ss_dssp -----------------------------HHHH-----HHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTT-
T ss_pred ccccccccccccccc----h---hhh-ccchhH-----HHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCC-
Confidence 00000000 0 000 000000 000011111111 1124567888999888754
Q ss_pred hhcCccccCCCCceeecccccCCCCCCCCccccccchhhhhccCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCCEE
Q 012563 227 LSTLPEEYSGIPVFPIGPFHKYFPASSSSLLSQDQSSISWLDKQAPKSVIYVSFGSVAAINETEFLEIAWGLANSRVPFL 306 (460)
Q Consensus 227 ~~~~~~~~~~~pv~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i 306 (460)
... ++.++++|||+..... +..+|++..+++++|||++||......+.+..+++++++.+.+++
T Consensus 225 ----~~~-~~~~~~~vGp~~~~~~-----------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~ 288 (424)
T 2iya_A 225 ----GDT-VGDNYTFVGPTYGDRS-----------HQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVV 288 (424)
T ss_dssp ----GGG-CCTTEEECCCCCCCCG-----------GGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEE
T ss_pred ----ccC-CCCCEEEeCCCCCCcc-----------cCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEE
Confidence 233 5567999999764211 023577665678999999999986567888899999988888998
Q ss_pred EEECCCCCCCchhhccCchhHHhhhCCCceEEeccchHHHhccCCCcceeeccCchhhHHHHhhCCCeeecCcccchhhH
Q 012563 307 WVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPAVGGFLTHSGWNSTLESICEGVPMICQPCLADQMVN 386 (460)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~v~~P~~~DQ~~n 386 (460)
|.++.+... +.+. ..++|+++.+|+||.++|+++++ ||||||+||++||+++|+|+|++|...||+.|
T Consensus 289 ~~~g~~~~~--~~~~--------~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~n 356 (424)
T 2iya_A 289 LSVGRFVDP--ADLG--------EVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMN 356 (424)
T ss_dssp EECCTTSCG--GGGC--------SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHH
T ss_pred EEECCcCCh--HHhc--------cCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHH
Confidence 888764310 1111 23456699999999999999998 99999999999999999999999999999999
Q ss_pred HHHHHHhhceeEeeCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 012563 387 ARYVSHVWRVGLHLEG-KLEKKEIETAIRRLMVEAEGQEMRERITCLKKNVDACLRQGGSSHQALGRLVDHI 457 (460)
Q Consensus 387 a~~v~~~lG~G~~~~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 457 (460)
|+++++ +|+|+.++. .++.++|.++|+++++| ++++++++++++.++ ..++..++++.+.+.+
T Consensus 357 a~~l~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~ 420 (424)
T 2iya_A 357 AERIVE-LGLGRHIPRDQVTAEKLREAVLAVASD---PGVAERLAAVRQEIR----EAGGARAAADILEGIL 420 (424)
T ss_dssp HHHHHH-TTSEEECCGGGCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----TSCHHHHHHHHHHHHH
T ss_pred HHHHHH-CCCEEEcCcCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH----hcCcHHHHHHHHHHHH
Confidence 999999 699999986 78999999999999999 899999999999988 5677777777766654
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=7.6e-45 Score=359.24 Aligned_cols=354 Identities=17% Similarity=0.186 Sum_probs=225.9
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCCCCCC-------CCCC-----C-
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNSPNSCNYPHFDFHSISDGLTD-------PSAE-----D- 79 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-----~- 79 (460)
+.|||||+++|+.||++|+++||++|++|||+|||++++.... .. ..++.+..+...... .... .
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~-~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRA-VA-EAGLCAVDVSPGVNYAKLFVPDDTDVTDPMHSE 98 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHH-HH-TTTCEEEESSTTCCSHHHHSCCC----------
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhh-HH-hcCCeeEecCCchhHhhhccccccccccccchh
Confidence 3599999999999999999999999999999999999854322 22 247778777532211 0000 0
Q ss_pred ---HHHHHHHHHHhcchhHHHHHHHHhhcCCCCCCCCCCceEEEEcCcchHHH-HHhhcCCCeEEEeCccHHHHHHHhhc
Q 012563 80 ---STTILITLNAKCMVPFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQFTH-VADEFKLPTIILQTHSVSGYLGIAAY 155 (460)
Q Consensus 80 ---~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~~~~-~A~~lgiP~v~~~~~~~~~~~~~~~~ 155 (460)
...+...+.......+.+.++.+... +||+||+|.+.+++. +|+.+|||++.+...+..........
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~~ 169 (400)
T 4amg_A 99 GLGEGFFAEMFARVSAVAVDGALRTARSW---------RPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLGAL 169 (400)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHH---------CCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhc---------CCCEEEECcchHHHHHHHHHcCCCceeecccccccccchhhH
Confidence 11111112122222222233323222 899999999999999 99999999998766543322211110
Q ss_pred ccccccCCCCCCCCCCCCccCCCCCCCCCCCCCcccCCCCCcHHHHHHHHhhhccCce-EEecchHHhhHHHhhcCcccc
Q 012563 156 PFLRDKGYVPIQDPQSESPVIEYPPLRVKDIPKLETRYPEYNYPLVSAMVNNIKASSG-MIWNTFEELEQAALSTLPEEY 234 (460)
Q Consensus 156 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~s~~~le~~~~~~~~~~~ 234 (460)
.. ........+..-....... .+....+.+... .+..
T Consensus 170 ~~-------------------------------------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 207 (400)
T 4amg_A 170 IR-------------------------------------RAMSKDYERHGVTGEPTGSVRLTTTPPSVEAL-----LPED 207 (400)
T ss_dssp HH-------------------------------------HHTHHHHHHTTCCCCCSCEEEEECCCHHHHHT-----SCGG
T ss_pred HH-------------------------------------HHHHHHHHHhCCCcccccchhhcccCchhhcc-----Cccc
Confidence 00 0000000000000011111 122222211111 1110
Q ss_pred CCCC-ceeecccccCCCCCCCCccccccchhhhhccCCCCeEEEEEecccccCC--HHHHHHHHHHHHhCCCCEEEEECC
Q 012563 235 SGIP-VFPIGPFHKYFPASSSSLLSQDQSSISWLDKQAPKSVIYVSFGSVAAIN--ETEFLEIAWGLANSRVPFLWVVRP 311 (460)
Q Consensus 235 ~~~p-v~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~--~~~~~~~~~al~~~~~~~i~~~~~ 311 (460)
...+ ...+.+.... ....+.+|++..+++++|||||||....+ .+.+..++.++...+.+++|..++
T Consensus 208 ~~~~~~~~~~~~~~~----------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~ 277 (400)
T 4amg_A 208 RRSPGAWPMRYVPYN----------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGG 277 (400)
T ss_dssp GCCTTCEECCCCCCC----------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCT
T ss_pred ccCCcccCccccccc----------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecC
Confidence 1111 2222221111 11224568888889999999999987743 356788999999999999999877
Q ss_pred CCCCCchhhccCchhHHhhhCCCceEEeccchHHHhccCCCcceeeccCchhhHHHHhhCCCeeecCcccchhhHHHHHH
Q 012563 312 GLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPAVGGFLTHSGWNSTLESICEGVPMICQPCLADQMVNARYVS 391 (460)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~ 391 (460)
..... ...+|+ |+++.+|+||.++|+|+++ ||||||+||++||+++|||+|++|+.+||+.||++++
T Consensus 278 ~~~~~---~~~~~~--------~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~ 344 (400)
T 4amg_A 278 GDLAL---LGELPA--------NVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLT 344 (400)
T ss_dssp TCCCC---CCCCCT--------TEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHH
T ss_pred ccccc---cccCCC--------CEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHH
Confidence 64221 233444 4499999999999999998 9999999999999999999999999999999999999
Q ss_pred HhhceeEeeCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 012563 392 HVWRVGLHLEG-KLEKKEIETAIRRLMVEAEGQEMRERITCLKKNVDACLRQGGSSHQALGRLV 454 (460)
Q Consensus 392 ~~lG~G~~~~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 454 (460)
+ +|+|+.++. +++. ++|+++|+| ++||++|++++++++ ...+..++++.+.
T Consensus 345 ~-~G~g~~l~~~~~~~----~al~~lL~d---~~~r~~a~~l~~~~~----~~~~~~~~a~~le 396 (400)
T 4amg_A 345 G-LGIGFDAEAGSLGA----EQCRRLLDD---AGLREAALRVRQEMS----EMPPPAETAAXLV 396 (400)
T ss_dssp H-HTSEEECCTTTCSH----HHHHHHHHC---HHHHHHHHHHHHHHH----TSCCHHHHHHHHH
T ss_pred H-CCCEEEcCCCCchH----HHHHHHHcC---HHHHHHHHHHHHHHH----cCCCHHHHHHHHH
Confidence 9 599999986 6655 467789999 899999999999998 4455555554443
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=7.9e-43 Score=346.40 Aligned_cols=374 Identities=14% Similarity=0.086 Sum_probs=246.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCCCCCCCC---CCCHHHHHHHHHHhc
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNSPNSCNYPHFDFHSISDGLTDPS---AEDSTTILITLNAKC 91 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 91 (460)
|||++++.++.||++|+++||++|+++||+|+|++++...... ...|++|+.++....... .......+ ...+
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v-~~~g~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~ 76 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERL-AEVGVPHVPVGPSARAPIQRAKPLTAEDV---RRFT 76 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHH-HHTTCCEEECCC-------CCSCCCHHHH---HHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHH-HHcCCeeeeCCCCHHHHhhcccccchHHH---HHHH
Confidence 8999999999999999999999999999999999996432221 235899999985432111 11111111 1112
Q ss_pred chhHHHHHHHHhhcCCCCCCCCCCceEEEEcC-cchH--HH-HHhhcCCCeEEEeCccHHHHHHHhhcccccccCCCCCC
Q 012563 92 MVPFRNCLAKLVSNTNNNNAQEDSVACLITDF-LWQF--TH-VADEFKLPTIILQTHSVSGYLGIAAYPFLRDKGYVPIQ 167 (460)
Q Consensus 92 ~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~-~~~~--~~-~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 167 (460)
...+.+.++.+.... . +||+||+|. +..+ +. +|+++|||++.+.+++..... .+.|..
T Consensus 77 ~~~~~~~~~~l~~~~-~------~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~-----------~~~p~~ 138 (415)
T 1iir_A 77 TEAIATQFDEIPAAA-E------GCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS-----------PYYPPP 138 (415)
T ss_dssp HHHHHHHHHHHHHHT-T------TCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-----------SSSCCC
T ss_pred HHHHHHHHHHHHHHh-c------CCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCC-----------cccCCc
Confidence 222344455554311 1 899999997 6677 77 999999999999887544211 111110
Q ss_pred CCCCCCccCCCCCCCCCCCCCc-ccCC-CCCcHHHHHHHHh------------hhccCceEEecchHHhhH-HHhhcCcc
Q 012563 168 DPQSESPVIEYPPLRVKDIPKL-ETRY-PEYNYPLVSAMVN------------NIKASSGMIWNTFEELEQ-AALSTLPE 232 (460)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~------------~~~~~~~~l~~s~~~le~-~~~~~~~~ 232 (460)
.... .+++ ......+... .... ...+...+..... ..... .+++|++++|++ + ++
T Consensus 139 ~~~~--~~~~--~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~-----~~ 208 (415)
T 1iir_A 139 PLGE--PSTQ--DTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPLQ-----PT 208 (415)
T ss_dssp C-------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCCC-----CC
T ss_pred cCCc--cccc--hHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCCC-----cc
Confidence 0000 0000 0000000000 0000 0000000111111 11122 568888888864 2 33
Q ss_pred ccCCCCceeecccccCCCCCCCCccccccchhhhhccCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEECCC
Q 012563 233 EYSGIPVFPIGPFHKYFPASSSSLLSQDQSSISWLDKQAPKSVIYVSFGSVAAINETEFLEIAWGLANSRVPFLWVVRPG 312 (460)
Q Consensus 233 ~~~~~pv~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 312 (460)
. + ++++|||+..... .+.+.++.+|++. ++++|||++||.. ...+.+..+++++++.+.+++|+++..
T Consensus 209 ~-~--~~~~vG~~~~~~~------~~~~~~~~~~l~~--~~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v~~~g~~ 276 (415)
T 1iir_A 209 D-L--DAVQTGAWILPDE------RPLSPELAAFLDA--GPPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVILSRGWA 276 (415)
T ss_dssp S-S--CCEECCCCCCCCC------CCCCHHHHHHHHT--SSCCEEEECC----CCHHHHHHHHHHHHHTTCCEEECTTCT
T ss_pred c-C--CeEeeCCCccCcc------cCCCHHHHHHHhh--CCCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 3 2 7999999876432 1223457899976 3589999999987 567788889999999999999988765
Q ss_pred CCCCchhhccCchhHHhhhCCCceEEeccchHHHhccCCCcceeeccCchhhHHHHhhCCCeeecCcccchhhHHHHHHH
Q 012563 313 LVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPAVGGFLTHSGWNSTLESICEGVPMICQPCLADQMVNARYVSH 392 (460)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~ 392 (460)
... ...++ +|+++.+|+||.++|+.+++ ||||||+||++||+++|+|+|++|...||..||+++++
T Consensus 277 ~~~----~~~~~--------~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~ 342 (415)
T 1iir_A 277 DLV----LPDDG--------ADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAE 342 (415)
T ss_dssp TCC----CSSCG--------GGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH
T ss_pred ccc----ccCCC--------CCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCCCCccHHHHHHHHH
Confidence 311 11233 45589999999999988888 99999999999999999999999999999999999999
Q ss_pred hhceeEeeCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 012563 393 VWRVGLHLEG-KLEKKEIETAIRRLMVEAEGQEMRERITCLKKNVDACLRQGGSSHQALGRLVD 455 (460)
Q Consensus 393 ~lG~G~~~~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 455 (460)
.|+|+.++. .++.++|.++|+++ +| ++++++++++++.++ ...+..++++.+.+
T Consensus 343 -~g~g~~~~~~~~~~~~l~~~i~~l-~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~ 397 (415)
T 1iir_A 343 -LGVGVAHDGPIPTFDSLSAALATA-LT---PETHARATAVAGTIR----TDGAAVAARLLLDA 397 (415)
T ss_dssp -HTSEEECSSSSCCHHHHHHHHHHH-TS---HHHHHHHHHHHHHSC----SCHHHHHHHHHHHH
T ss_pred -CCCcccCCcCCCCHHHHHHHHHHH-cC---HHHHHHHHHHHHHHh----hcChHHHHHHHHHH
Confidence 599999986 78999999999999 88 899999999998876 44445555444443
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=5.7e-42 Score=340.39 Aligned_cols=367 Identities=12% Similarity=0.033 Sum_probs=247.7
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCCCCCCCCC----CCHHHHHHHHHHh
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNSPNSCNYPHFDFHSISDGLTDPSA----EDSTTILITLNAK 90 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 90 (460)
|||++++.++.||++|+++||++|+++||+|+|++++...+... ..|++|+.++........ ......+..+.
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 77 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLA-EVGVPHVPVGLPQHMMLQEGMPPPPPEEEQRLA-- 77 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHH-HHTCCEEECSCCGGGCCCTTSCCCCHHHHHHHH--
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHH-HcCCeeeecCCCHHHHHhhccccchhHHHHHHH--
Confidence 89999999999999999999999999999999999864222212 357899998854221110 11111111111
Q ss_pred cchhHHHHHHHHhhcCCCCCCCCCCceEEEEcC-cchH--HH-HHhhcCCCeEEEeCccHHHHHHHhhcccccccCCCCC
Q 012563 91 CMVPFRNCLAKLVSNTNNNNAQEDSVACLITDF-LWQF--TH-VADEFKLPTIILQTHSVSGYLGIAAYPFLRDKGYVPI 166 (460)
Q Consensus 91 ~~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~-~~~~--~~-~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~ 166 (460)
...+.+.++.+.... . +||+||+|. +..+ +. +|+.+|||++.+.+++..... .+.|.
T Consensus 78 -~~~~~~~~~~l~~~~-~------~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~-----------~~~p~ 138 (416)
T 1rrv_A 78 -AMTVEMQFDAVPGAA-E------GCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS-----------PHLPP 138 (416)
T ss_dssp -HHHHHHHHHHHHHHT-T------TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-----------SSSCC
T ss_pred -HHHHHHHHHHHHHHh-c------CCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC-----------cccCC
Confidence 122233444444211 1 899999997 3455 67 999999999998877533211 11110
Q ss_pred CCCCCCCccCCCCCCCCCCCCCcccCC-CC-C----cHHHHHHHH------------hhhccCceEEecchHHhhHHHhh
Q 012563 167 QDPQSESPVIEYPPLRVKDIPKLETRY-PE-Y----NYPLVSAMV------------NNIKASSGMIWNTFEELEQAALS 228 (460)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~----~~~~~~~~~------------~~~~~~~~~l~~s~~~le~~~~~ 228 (460)
... ++ .....+....... .. . ......... +..... .++++++++|+++
T Consensus 139 ~~~--------~~-~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~--- 205 (416)
T 1rrv_A 139 AYD--------EP-TTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPL--- 205 (416)
T ss_dssp CBC--------SC-CCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCC---
T ss_pred CCC--------CC-CCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCC---
Confidence 000 00 0000000000000 00 0 000011111 111223 5788888888643
Q ss_pred cCccccCCCCceeecccccCCCCCCCCccccccchhhhhccCCCCeEEEEEeccccc-CCHHHHHHHHHHHHhCCCCEEE
Q 012563 229 TLPEEYSGIPVFPIGPFHKYFPASSSSLLSQDQSSISWLDKQAPKSVIYVSFGSVAA-INETEFLEIAWGLANSRVPFLW 307 (460)
Q Consensus 229 ~~~~~~~~~pv~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~-~~~~~~~~~~~al~~~~~~~i~ 307 (460)
++. .++++|||+..... .+.+.++.+|++. ++++|||++||... ...+.+..++++++..+.+++|
T Consensus 206 --~~~---~~~~~vG~~~~~~~------~~~~~~~~~~l~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~ 272 (416)
T 1rrv_A 206 --QPD---VDAVQTGAWLLSDE------RPLPPELEAFLAA--GSPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVIL 272 (416)
T ss_dssp --CSS---CCCEECCCCCCCCC------CCCCHHHHHHHHS--SSCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred --CCC---CCeeeECCCccCcc------CCCCHHHHHHHhc--CCCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEE
Confidence 333 27999999876532 1223447889976 35899999999874 3456788899999999999999
Q ss_pred EECCCCCCCchhhccCchhHHhhhCCCceEEeccchHHHhccCCCcceeeccCchhhHHHHhhCCCeeecCcccchhhHH
Q 012563 308 VVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPAVGGFLTHSGWNSTLESICEGVPMICQPCLADQMVNA 387 (460)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~v~~P~~~DQ~~na 387 (460)
+++..... . ...++|+++.+|+||.++|+++++ ||||||+||++||+++|+|+|++|...||+.||
T Consensus 273 ~~g~~~~~----~--------~~~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na 338 (416)
T 1rrv_A 273 SRGWTELV----L--------PDDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFA 338 (416)
T ss_dssp ECTTTTCC----C--------SCCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBTHHHHH
T ss_pred EeCCcccc----c--------cCCCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCCCCcHHHH
Confidence 98865311 0 123456689999999999999988 999999999999999999999999999999999
Q ss_pred HHHHHhhceeEeeCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHH
Q 012563 388 RYVSHVWRVGLHLEG-KLEKKEIETAIRRLMVEAEGQEMRERITCLKKNVDACLRQGGSSHQALGRL 453 (460)
Q Consensus 388 ~~v~~~lG~G~~~~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~ 453 (460)
+++++ .|+|+.++. .++.++|.++|+++ +| ++++++++++++.++ ..++. ++++.+
T Consensus 339 ~~l~~-~g~g~~~~~~~~~~~~l~~~i~~l-~~---~~~~~~~~~~~~~~~----~~~~~-~~~~~i 395 (416)
T 1rrv_A 339 GRVAA-LGIGVAHDGPTPTFESLSAALTTV-LA---PETRARAEAVAGMVL----TDGAA-AAADLV 395 (416)
T ss_dssp HHHHH-HTSEEECSSSCCCHHHHHHHHHHH-TS---HHHHHHHHHHTTTCC----CCHHH-HHHHHH
T ss_pred HHHHH-CCCccCCCCCCCCHHHHHHHHHHh-hC---HHHHHHHHHHHHHHh----hcCcH-HHHHHH
Confidence 99999 599999976 78999999999999 88 899999999998877 44445 555555
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=2.5e-40 Score=328.57 Aligned_cols=375 Identities=15% Similarity=0.144 Sum_probs=254.9
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCCCCCCCCC------CCHHHHHH
Q 012563 12 RNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNSPNSCNYPHFDFHSISDGLTDPSA------EDSTTILI 85 (460)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 85 (460)
.+.|||+|++.++.||++|+++||++|+++||+|+|++++...+... ..|+.+..++..++.... ......+.
T Consensus 18 ~~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (415)
T 3rsc_A 18 RHMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVR-AAGATVVPYQSEIIDADAAEVFGSDDLGVRPH 96 (415)
T ss_dssp -CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHH-HTTCEEEECCCSTTTCCHHHHHHSSSSCHHHH
T ss_pred ccCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHH-hcCCEEEeccccccccccchhhccccHHHHHH
Confidence 34589999999999999999999999999999999999754333222 358999999854432211 00111111
Q ss_pred H-HHHhcchhHHHHHHHHhhcCCCCCCCCCCceEEEEc-CcchHHH-HHhhcCCCeEEEeCccHHHHHHHhhcccccccC
Q 012563 86 T-LNAKCMVPFRNCLAKLVSNTNNNNAQEDSVACLITD-FLWQFTH-VADEFKLPTIILQTHSVSGYLGIAAYPFLRDKG 162 (460)
Q Consensus 86 ~-~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D-~~~~~~~-~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 162 (460)
. +.......+.+ +.++.+.. +||+||+| ....++. +|+++|||++.+.+.......... .+.....
T Consensus 97 ~~~~~~~~~~~~~-l~~~l~~~--------~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~-~~~~~~~- 165 (415)
T 3rsc_A 97 LMYLRENVSVLRA-TAEALDGD--------VPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEHYSF-SQDMVTL- 165 (415)
T ss_dssp HHHHHHHHHHHHH-HHHHHSSS--------CCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSSCCH-HHHHHHH-
T ss_pred HHHHHHHHHHHHH-HHHHHhcc--------CCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCcccc-ccccccc-
Confidence 1 22222222222 23333222 89999999 7777777 999999999998755321100000 0000000
Q ss_pred CCCCCCCCCCCccCCCCCCCCCCCCCcccCCCCCcHHHHHHHHhh----------hc-cCceEEecchHHhhHHHhhcCc
Q 012563 163 YVPIQDPQSESPVIEYPPLRVKDIPKLETRYPEYNYPLVSAMVNN----------IK-ASSGMIWNTFEELEQAALSTLP 231 (460)
Q Consensus 163 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~~~~l~~s~~~le~~~~~~~~ 231 (460)
+.. ..+ .........+.+.... .. ..+..+....+++++. .
T Consensus 166 ~~~-------------------~~p----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~ 217 (415)
T 3rsc_A 166 AGT-------------------IDP----LDLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIA-----G 217 (415)
T ss_dssp HTC-------------------CCG----GGCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTT-----G
T ss_pred ccc-------------------CCh----hhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCC-----c
Confidence 000 000 0000001111111111 11 1145555555555432 4
Q ss_pred cccCCCCceeecccccCCCCCCCCccccccchhhhhccCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEECC
Q 012563 232 EEYSGIPVFPIGPFHKYFPASSSSLLSQDQSSISWLDKQAPKSVIYVSFGSVAAINETEFLEIAWGLANSRVPFLWVVRP 311 (460)
Q Consensus 232 ~~~~~~pv~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 311 (460)
.. ++.++.++||+...... ..+|....+++++|||++||......+.+..+++++...+.+++|.++.
T Consensus 218 ~~-~~~~~~~vGp~~~~~~~-----------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~ 285 (415)
T 3rsc_A 218 DT-FDDRFVFVGPCFDDRRF-----------LGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGG 285 (415)
T ss_dssp GG-CCTTEEECCCCCCCCGG-----------GCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTT
T ss_pred cc-CCCceEEeCCCCCCccc-----------CcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCC
Confidence 43 55669999987653211 2345554567899999999998767778889999999888888888875
Q ss_pred CCCCCchhhccCchhHHhhhCCCceEEeccchHHHhccCCCcceeeccCchhhHHHHhhCCCeeecCcccchhhHHHHHH
Q 012563 312 GLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPAVGGFLTHSGWNSTLESICEGVPMICQPCLADQMVNARYVS 391 (460)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~ 391 (460)
+... +.+.. .++|+++..|+|+.++|+++++ ||||||+||++|++++|+|+|++|...||+.||++++
T Consensus 286 ~~~~--~~l~~--------~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~ 353 (415)
T 3rsc_A 286 QVDP--AALGD--------LPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVD 353 (415)
T ss_dssp TSCG--GGGCC--------CCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHH
T ss_pred CCCh--HHhcC--------CCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHH
Confidence 4211 11222 3456699999999999999999 9999999999999999999999999999999999999
Q ss_pred HhhceeEeeCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHh
Q 012563 392 HVWRVGLHLEG-KLEKKEIETAIRRLMVEAEGQEMRERITCLKKNVDACLRQGGSSHQALGRLVDHIL 458 (460)
Q Consensus 392 ~~lG~G~~~~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (460)
+ .|+|+.+.. +++++.|.++|.++++| ++++++++++++.+. .+++..++++.+.+.+.
T Consensus 354 ~-~g~g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~ 413 (415)
T 3rsc_A 354 Q-LGLGAVLPGEKADGDTLLAAVGAVAAD---PALLARVEAMRGHVR----RAGGAARAADAVEAYLA 413 (415)
T ss_dssp H-HTCEEECCGGGCCHHHHHHHHHHHHTC---HHHHHHHHHHHHHHH----HSCHHHHHHHHHHHHHH
T ss_pred H-cCCEEEcccCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHhh
Confidence 9 499999987 78999999999999999 899999999999988 57788888888777664
No 11
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=1.8e-39 Score=320.77 Aligned_cols=372 Identities=19% Similarity=0.198 Sum_probs=252.8
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCCCCCCCC------CCCHHHHHHH-H
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNSPNSCNYPHFDFHSISDGLTDPS------AEDSTTILIT-L 87 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~-~ 87 (460)
|||++++.++.||++|++.||++|+++||+|+|++++...+.. ...|+.++.++..++... .......+.. +
T Consensus 5 ~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (402)
T 3ia7_A 5 RHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEV-KAAGAEVVLYKSEFDTFHVPEVVKQEDAETQLHLVY 83 (402)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHH-HHTTCEEEECCCGGGTSSSSSSSCCTTHHHHHHHHH
T ss_pred CEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHH-HHcCCEEEecccccccccccccccccchHHHHHHHH
Confidence 4999999999999999999999999999999999985332222 235799999874332211 1113333333 3
Q ss_pred HHhcchhHHHHHHHHhhcCCCCCCCCCCceEEEEc-CcchHHH-HHhhcCCCeEEEeCccHHHHHHHhhcccccccCCCC
Q 012563 88 NAKCMVPFRNCLAKLVSNTNNNNAQEDSVACLITD-FLWQFTH-VADEFKLPTIILQTHSVSGYLGIAAYPFLRDKGYVP 165 (460)
Q Consensus 88 ~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D-~~~~~~~-~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p 165 (460)
.......+.+..+.+.+. +||+||+| ....++. +|+++|||++.+.+.......... .+....... .
T Consensus 84 ~~~~~~~~~~l~~~l~~~---------~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~-~~~~~~~~~-~ 152 (402)
T 3ia7_A 84 VRENVAILRAAEEALGDN---------PPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSL-FKELWKSNG-Q 152 (402)
T ss_dssp HHHHHHHHHHHHHHHTTC---------CCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCH-HHHHHHHHT-C
T ss_pred HHHHHHHHHHHHHHHhcc---------CCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccccc-ccccccccc-c
Confidence 222222233333333222 89999999 7777778 999999999998754322100000 000000000 0
Q ss_pred CCCCCCCCccCCCCCCCCCCCCCcccCCCCCcHHHHHHHHh----------hhccC-ceEEecchHHhhHHHhhcCcccc
Q 012563 166 IQDPQSESPVIEYPPLRVKDIPKLETRYPEYNYPLVSAMVN----------NIKAS-SGMIWNTFEELEQAALSTLPEEY 234 (460)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~-~~~l~~s~~~le~~~~~~~~~~~ 234 (460)
. .+ .........+.+... ..... +..+....+++++. ...
T Consensus 153 ----~----~~---------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~- 203 (402)
T 3ia7_A 153 ----R----HP---------------ADVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPF-----AET- 203 (402)
T ss_dssp ----C----CG---------------GGSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTT-----GGG-
T ss_pred ----c----Ch---------------hhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCc-----ccc-
Confidence 0 00 000000011111111 01111 44555555555432 343
Q ss_pred CCCCceeecccccCCCCCCCCccccccchhhhhccCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEECCCCC
Q 012563 235 SGIPVFPIGPFHKYFPASSSSLLSQDQSSISWLDKQAPKSVIYVSFGSVAAINETEFLEIAWGLANSRVPFLWVVRPGLV 314 (460)
Q Consensus 235 ~~~pv~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~ 314 (460)
++.+++++||+...... ..+|....+++++||+++||......+.+..+++++...+.++++.++.+..
T Consensus 204 ~~~~~~~vGp~~~~~~~-----------~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 272 (402)
T 3ia7_A 204 FDERFAFVGPTLTGRDG-----------QPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFLD 272 (402)
T ss_dssp CCTTEEECCCCCCC---------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTSC
T ss_pred CCCCeEEeCCCCCCccc-----------CCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcCC
Confidence 55669999987653221 2345544567899999999998877778899999999888888888875421
Q ss_pred CCchhhccCchhHHhhhCCCceEEeccchHHHhccCCCcceeeccCchhhHHHHhhCCCeeecCc-ccchhhHHHHHHHh
Q 012563 315 DGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPAVGGFLTHSGWNSTLESICEGVPMICQPC-LADQMVNARYVSHV 393 (460)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~v~~P~-~~DQ~~na~~v~~~ 393 (460)
. +.+.. .++|+++..|+|+.++|+++++ ||||||+||++|++++|+|+|++|. ..||..||+++++
T Consensus 273 ~--~~~~~--------~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~- 339 (402)
T 3ia7_A 273 P--AVLGP--------LPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIE- 339 (402)
T ss_dssp G--GGGCS--------CCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHH-
T ss_pred h--hhhCC--------CCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHH-
Confidence 0 11222 3456699999999999999999 9999999999999999999999999 9999999999999
Q ss_pred hceeEeeCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHh
Q 012563 394 WRVGLHLEG-KLEKKEIETAIRRLMVEAEGQEMRERITCLKKNVDACLRQGGSSHQALGRLVDHIL 458 (460)
Q Consensus 394 lG~G~~~~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (460)
.|+|..+.. +++++.|.++|.++++| ++++++++++++.+. ++++..++++.+.+.+.
T Consensus 340 ~g~g~~~~~~~~~~~~l~~~~~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~ 398 (402)
T 3ia7_A 340 LGLGSVLRPDQLEPASIREAVERLAAD---SAVRERVRRMQRDIL----SSGGPARAADEVEAYLG 398 (402)
T ss_dssp TTSEEECCGGGCSHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----TSCHHHHHHHHHHHHHH
T ss_pred cCCEEEccCCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHh----hCChHHHHHHHHHHHHh
Confidence 599999987 78999999999999999 899999999998887 67788888887777654
No 12
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=6.2e-40 Score=324.16 Aligned_cols=361 Identities=14% Similarity=0.096 Sum_probs=241.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCCCCCCCC---CCCHHHHHHHHHHhc
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNSPNSCNYPHFDFHSISDGLTDPS---AEDSTTILITLNAKC 91 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 91 (460)
|||+|++.++.||++|+++||++|+++||+|+|++++... ......|+.|++++....... ......+...+..
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~-~~v~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-- 77 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYV-ERCAEVGVPMVPVGRAVRAGAREPGELPPGAAEVVTE-- 77 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGH-HHHHHTTCCEEECSSCSSGGGSCTTCCCTTCGGGHHH--
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHH-HHHHHcCCceeecCCCHHHHhccccCCHHHHHHHHHH--
Confidence 8999999999999999999999999999999999985322 222246899999874322110 0000000011111
Q ss_pred chhHHHHHHHHhhcCCCCCCCCCCceEEEEcCcchHH---H-HHhhcCCCeEEEeCccHHHHHHHhhc-ccccccCCCCC
Q 012563 92 MVPFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQFT---H-VADEFKLPTIILQTHSVSGYLGIAAY-PFLRDKGYVPI 166 (460)
Q Consensus 92 ~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~~~---~-~A~~lgiP~v~~~~~~~~~~~~~~~~-~~~~~~~~~p~ 166 (460)
.+.+.++.+.+... +||+||+|.....+ . +|+++|||++.+..++.......... ......
T Consensus 78 --~~~~~~~~l~~~~~-------~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~~~~~~~~----- 143 (404)
T 3h4t_A 78 --VVAEWFDKVPAAIE-------GCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMYNQ----- 143 (404)
T ss_dssp --HHHHHHHHHHHHHT-------TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHHHHH-----
T ss_pred --HHHHHHHHHHHHhc-------CCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHHHHHHHHH-----
Confidence 11222222222111 79999998665544 6 99999999999888765321100000 000000
Q ss_pred CCCCCCCccCCCCCCCCCCCCCcccCCCCCcHHHHHHHHhhh-----------ccCceEEecchHHhhHHHhhcCccccC
Q 012563 167 QDPQSESPVIEYPPLRVKDIPKLETRYPEYNYPLVSAMVNNI-----------KASSGMIWNTFEELEQAALSTLPEEYS 235 (460)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~s~~~le~~~~~~~~~~~~ 235 (460)
.....+...+.+....+ ...+..+.+..+.+.+. ++ +
T Consensus 144 -------------------------~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~-----~~--~ 191 (404)
T 3h4t_A 144 -------------------------GADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPL-----RP--T 191 (404)
T ss_dssp -------------------------HHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCC-----CT--T
T ss_pred -------------------------HHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCC-----CC--C
Confidence 00000000000000000 00122344555555322 22 3
Q ss_pred CCCceeecccccCCCCCCCCccccccchhhhhccCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEECCCCCC
Q 012563 236 GIPVFPIGPFHKYFPASSSSLLSQDQSSISWLDKQAPKSVIYVSFGSVAAINETEFLEIAWGLANSRVPFLWVVRPGLVD 315 (460)
Q Consensus 236 ~~pv~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~ 315 (460)
+..++++|++...... .++ .++.+|++. ++++|||++||... ..+.+..+++++...+.+++|++++....
T Consensus 192 ~~~~~~~G~~~~~~~~----~~~--~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~~~~ 262 (404)
T 3h4t_A 192 DLGTVQTGAWILPDQR----PLS--AELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWAGLG 262 (404)
T ss_dssp CCSCCBCCCCCCCCCC----CCC--HHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTTTCC
T ss_pred CCCeEEeCccccCCCC----CCC--HHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCcccc
Confidence 3458899987654321 233 347889874 57899999999987 66788889999999999999998865421
Q ss_pred CchhhccCchhHHhhhCCCceEEeccchHHHhccCCCcceeeccCchhhHHHHhhCCCeeecCcccchhhHHHHHHHhhc
Q 012563 316 GVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPAVGGFLTHSGWNSTLESICEGVPMICQPCLADQMVNARYVSHVWR 395 (460)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG 395 (460)
. ... ++|+++.+|+||.++|+++++ ||||||+||+.|++++|+|+|++|+..||+.||+++++ .|
T Consensus 263 ~----~~~--------~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~-~G 327 (404)
T 3h4t_A 263 R----IDE--------GDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVAD-LG 327 (404)
T ss_dssp C----SSC--------CTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH-HT
T ss_pred c----ccC--------CCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHH-CC
Confidence 1 112 456699999999999999998 99999999999999999999999999999999999999 59
Q ss_pred eeEeeCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 012563 396 VGLHLEG-KLEKKEIETAIRRLMVEAEGQEMRERITCLKKNVDACLRQGGSSHQALGRLVDHI 457 (460)
Q Consensus 396 ~G~~~~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 457 (460)
+|+.+.. +++++.|.++|+++++ ++|+++++++++.+. . .+.+++++.+.+.+
T Consensus 328 ~g~~l~~~~~~~~~l~~ai~~ll~----~~~~~~~~~~~~~~~----~-~~~~~~~~~i~~~~ 381 (404)
T 3h4t_A 328 VGVAHDGPTPTVESLSAALATALT----PGIRARAAAVAGTIR----T-DGTTVAAKLLLEAI 381 (404)
T ss_dssp SEEECSSSSCCHHHHHHHHHHHTS----HHHHHHHHHHHTTCC----C-CHHHHHHHHHHHHH
T ss_pred CEeccCcCCCCHHHHHHHHHHHhC----HHHHHHHHHHHHHHh----h-hHHHHHHHHHHHHH
Confidence 9999986 7899999999999997 379999999998887 4 55666666655544
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=7.1e-39 Score=320.49 Aligned_cols=368 Identities=11% Similarity=0.077 Sum_probs=239.5
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCCCCCC-C---------------CC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNSPNSCNYPHFDFHSISDGLTD-P---------------SA 77 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------------~~ 77 (460)
.|||++++.++.||++|+++||++|+++||+|+|++++...+. ....|++|+.++..... . ..
T Consensus 20 ~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~-v~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (441)
T 2yjn_A 20 HMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTED-ITAAGLTAVPVGTDVDLVDFMTHAGHDIIDYVRSLD 98 (441)
T ss_dssp CCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHH-HHTTTCCEEECSCCCCHHHHHHHTTHHHHHHHTTCC
T ss_pred ccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHH-HHhCCCceeecCCccchHHHhhhhhccccccccccc
Confidence 4899999999999999999999999999999999998543222 22468999999854210 0 00
Q ss_pred -----C---CHH---HHHHHHHHhcc-----h-hHHHHHHHHhhcCCCCCCCCCCceEEEEcCcchHHH-HHhhcCCCeE
Q 012563 78 -----E---DST---TILITLNAKCM-----V-PFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQFTH-VADEFKLPTI 139 (460)
Q Consensus 78 -----~---~~~---~~~~~~~~~~~-----~-~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~~~~-~A~~lgiP~v 139 (460)
. ... ..+..+...+. . .+.+.++.+.+. +||+||+|.+..++. +|+.+|||++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------~pDlVv~d~~~~~~~~aA~~lgiP~v 169 (441)
T 2yjn_A 99 FSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKW---------RPDLVIWEPLTFAAPIAAAVTGTPHA 169 (441)
T ss_dssp CTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHH---------CCSEEEECTTCTHHHHHHHHHTCCEE
T ss_pred ccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhc---------CCCEEEecCcchhHHHHHHHcCCCEE
Confidence 0 000 11111211111 1 333333333322 899999999777777 9999999999
Q ss_pred EEeCccHHHHHHHhhcccccccCCCCCCCCCCCCccCCCCCCCCCCCCCcccCCCCCcHHHHHHHHhhhc---------c
Q 012563 140 ILQTHSVSGYLGIAAYPFLRDKGYVPIQDPQSESPVIEYPPLRVKDIPKLETRYPEYNYPLVSAMVNNIK---------A 210 (460)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~ 210 (460)
.+...+.........+.. ...+.|.. .......+.+....+.+. .
T Consensus 170 ~~~~~~~~~~~~~~~~~~--~~~~~~~~------------------------~~~~~~~~~l~~~~~~~g~~~~~~~~~~ 223 (441)
T 2yjn_A 170 RLLWGPDITTRARQNFLG--LLPDQPEE------------------------HREDPLAEWLTWTLEKYGGPAFDEEVVV 223 (441)
T ss_dssp EECSSCCHHHHHHHHHHH--HGGGSCTT------------------------TCCCHHHHHHHHHHHHTTCCCCCGGGTS
T ss_pred EEecCCCcchhhhhhhhh--hccccccc------------------------cccchHHHHHHHHHHHcCCCCCCccccC
Confidence 987654332111110000 00011100 000111222222222211 1
Q ss_pred CceEEecchHHhhHHHhhcCccccCC-CCceeecccccCCCCCCCCccccccchhhhhccCCCCeEEEEEecccccC---
Q 012563 211 SSGMIWNTFEELEQAALSTLPEEYSG-IPVFPIGPFHKYFPASSSSLLSQDQSSISWLDKQAPKSVIYVSFGSVAAI--- 286 (460)
Q Consensus 211 ~~~~l~~s~~~le~~~~~~~~~~~~~-~pv~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~--- 286 (460)
.+..+..+.+.++++ . . ++ .++.++++. ...++.+|++..+++++|||++||....
T Consensus 224 ~~~~l~~~~~~~~~~-----~-~-~~~~~~~~~~~~-------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~ 283 (441)
T 2yjn_A 224 GQWTIDPAPAAIRLD-----T-G-LKTVGMRYVDYN-------------GPSVVPEWLHDEPERRRVCLTLGISSRENSI 283 (441)
T ss_dssp CSSEEECSCGGGSCC-----C-C-CCEEECCCCCCC-------------SSCCCCGGGSSCCSSCEEEEEC---------
T ss_pred CCeEEEecCccccCC-----C-C-CCCCceeeeCCC-------------CCcccchHhhcCCCCCEEEEECCCCcccccC
Confidence 223444444434311 1 1 11 123333110 1122567987666789999999998863
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEECCCCCCCchhhccCchhHHhhhCCCceEEeccchHHHhccCCCcceeeccCchhhHH
Q 012563 287 NETEFLEIAWGLANSRVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPAVGGFLTHSGWNSTLE 366 (460)
Q Consensus 287 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~~s~~e 366 (460)
..+.+..+++++...+.+++|++++..... +. ..++|+++..|+||.++|+.+++ ||||||+||++|
T Consensus 284 ~~~~~~~~~~al~~~~~~~v~~~g~~~~~~---l~--------~~~~~v~~~~~~~~~~ll~~ad~--~V~~~G~~t~~E 350 (441)
T 2yjn_A 284 GQVSIEELLGAVGDVDAEIIATFDAQQLEG---VA--------NIPDNVRTVGFVPMHALLPTCAA--TVHHGGPGSWHT 350 (441)
T ss_dssp -CCSTTTTHHHHHTSSSEEEECCCTTTTSS---CS--------SCCSSEEECCSCCHHHHGGGCSE--EEECCCHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCEEEEEECCcchhh---hc--------cCCCCEEEecCCCHHHHHhhCCE--EEECCCHHHHHH
Confidence 235567788999888999999887543111 11 12456699999999999999998 999999999999
Q ss_pred HHhhCCCeeecCcccchhhHHHHHHHhhceeEeeCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCC
Q 012563 367 SICEGVPMICQPCLADQMVNARYVSHVWRVGLHLEG-KLEKKEIETAIRRLMVEAEGQEMRERITCLKKNVDACLRQGGS 445 (460)
Q Consensus 367 al~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~~~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~ 445 (460)
++++|+|+|++|...||+.||+++++ .|+|+.++. +++.+.|.++|.++++| ++++++++++++.+. ...+
T Consensus 351 a~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~ 422 (441)
T 2yjn_A 351 AAIHGVPQVILPDGWDTGVRAQRTQE-FGAGIALPVPELTPDQLRESVKRVLDD---PAHRAGAARMRDDML----AEPS 422 (441)
T ss_dssp HHHTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCTTTCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----TSCC
T ss_pred HHHhCCCEEEeCCcccHHHHHHHHHH-cCCEEEcccccCCHHHHHHHHHHHhcC---HHHHHHHHHHHHHHH----cCCC
Confidence 99999999999999999999999999 599999987 78999999999999999 899999999999888 5777
Q ss_pred hHHHHHHHHHHHh
Q 012563 446 SHQALGRLVDHIL 458 (460)
Q Consensus 446 ~~~~~~~~~~~~~ 458 (460)
..++++.+.+.+.
T Consensus 423 ~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 423 PAEVVGICEELAA 435 (441)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7777777766543
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=3.1e-38 Score=310.21 Aligned_cols=350 Identities=13% Similarity=0.096 Sum_probs=244.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCCCC------------CCCCCCC--H
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNSPNSCNYPHFDFHSISDGL------------TDPSAED--S 80 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~--~ 80 (460)
|||++++.++.||++|+++||++|+++||+|++++++...+.. ...|++++.++... +...... .
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVV-TGVGLPAVATTDLPIRHFITTDREGRPEAIPSDPVA 79 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHH-HHTTCCEEESCSSCHHHHHHBCTTSCBCCCCCSHHH
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHH-HhCCCEEEEeCCcchHHHHhhhcccCccccCcchHH
Confidence 8999999999999999999999999999999999985322111 23578888887432 0001011 1
Q ss_pred HHHH-HH-HHHhcchhHHHHHHHHhhcCCCCCCCCCCceEEEEcCcchHHH-HHhhcCCCeEEEeCccHHHHHHHhhccc
Q 012563 81 TTIL-IT-LNAKCMVPFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQFTH-VADEFKLPTIILQTHSVSGYLGIAAYPF 157 (460)
Q Consensus 81 ~~~~-~~-~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~~~~-~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 157 (460)
...+ .. +...+...+.+..+.+.+. +||+||+|.+..++. +|+.+|||++.+...+...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~~l~~~---------~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~~--------- 141 (384)
T 2p6p_A 80 QARFTGRWFARMAASSLPRMLDFSRAW---------RPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVDA--------- 141 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH---------CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCC---------
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhcc---------CCcEEEECcchhhHHHHHHhcCCCEEEeccCCccc---------
Confidence 1111 11 1111112222333323222 899999998777777 9999999999876432100
Q ss_pred ccccCCCCCCCCCCCCccCCCCCCCCCCCCCcccCCCCCcHHHHHHHHhhh-----ccCceEEecchHHhhHHHhhcCcc
Q 012563 158 LRDKGYVPIQDPQSESPVIEYPPLRVKDIPKLETRYPEYNYPLVSAMVNNI-----KASSGMIWNTFEELEQAALSTLPE 232 (460)
Q Consensus 158 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~s~~~le~~~~~~~~~ 232 (460)
. . + .......+.+..... ...+.++.++.+.++++ .+
T Consensus 142 ----~-------~---------------~-------~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~-----~~ 183 (384)
T 2p6p_A 142 ----D-------G---------------I-------HPGADAELRPELSELGLERLPAPDLFIDICPPSLRPA-----NA 183 (384)
T ss_dssp ----T-------T---------------T-------HHHHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT-----TS
T ss_pred ----c-------h---------------h-------hHHHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC-----CC
Confidence 0 0 0 000011111111111 11456788888777633 21
Q ss_pred ccCC-CCceeecccccCCCCCCCCccccccchhhhhccCCCCeEEEEEecccccC-----CHHHHHHHHHHHHhCCCCEE
Q 012563 233 EYSG-IPVFPIGPFHKYFPASSSSLLSQDQSSISWLDKQAPKSVIYVSFGSVAAI-----NETEFLEIAWGLANSRVPFL 306 (460)
Q Consensus 233 ~~~~-~pv~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~-----~~~~~~~~~~al~~~~~~~i 306 (460)
++ .++.+++ .. . ..++.+|++..+++++|||++||.... ..+.+..+++++.+.+.+++
T Consensus 184 --~~~~~~~~~~-~~--~----------~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~ 248 (384)
T 2p6p_A 184 --APARMMRHVA-TS--R----------QCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELI 248 (384)
T ss_dssp --CCCEECCCCC-CC--C----------CCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEE
T ss_pred --CCCCceEecC-CC--C----------CCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEE
Confidence 11 2345553 11 0 112567887655678999999999864 34678889999998899999
Q ss_pred EEECCCCCCCchhhccCchhHHhhhCCCceEEeccchHHHhccCCCcceeeccCchhhHHHHhhCCCeeecCcccchhhH
Q 012563 307 WVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPAVGGFLTHSGWNSTLESICEGVPMICQPCLADQMVN 386 (460)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~v~~P~~~DQ~~n 386 (460)
|++++.. .+.+. ..++|+.+ .|+||.++|+++++ ||||||+||++||+++|+|+|++|...||+.|
T Consensus 249 ~~~g~~~----------~~~l~-~~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~ 314 (384)
T 2p6p_A 249 VAAPDTV----------AEALR-AEVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAP 314 (384)
T ss_dssp EECCHHH----------HHHHH-HHCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHH
T ss_pred EEeCCCC----------HHhhC-CCCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHH
Confidence 9876421 11121 24677899 99999999999988 99999999999999999999999999999999
Q ss_pred HHHHHHhhceeEeeCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHh
Q 012563 387 ARYVSHVWRVGLHLEG-KLEKKEIETAIRRLMVEAEGQEMRERITCLKKNVDACLRQGGSSHQALGRLVDHIL 458 (460)
Q Consensus 387 a~~v~~~lG~G~~~~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (460)
|+++++ .|+|+.++. .++.++|.++|.++++| ++++++++++++.++ ...+.+++++.+.+.+-
T Consensus 315 a~~~~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~ 379 (384)
T 2p6p_A 315 ARRVAD-YGAAIALLPGEDSTEAIADSCQELQAK---DTYARRAQDLSREIS----GMPLPATVVTALEQLAH 379 (384)
T ss_dssp HHHHHH-HTSEEECCTTCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----TSCCHHHHHHHHHHHHH
T ss_pred HHHHHH-CCCeEecCcCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH----hCCCHHHHHHHHHHHhh
Confidence 999999 599999976 78999999999999999 899999999999998 67778887777766553
No 15
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.1e-37 Score=311.06 Aligned_cols=371 Identities=15% Similarity=0.164 Sum_probs=246.3
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCCCCCCCCC------CCHHHHHHHH
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNSPNSCNYPHFDFHSISDGLTDPSA------EDSTTILITL 87 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 87 (460)
.|||++++.++.||++|++.||++|+++||+|++++++...... ...|++++.++..++.... ......+..+
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKV-AATGPRPVLYHSTLPGPDADPEAWGSTLLDNVEPF 85 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHH-HTTSCEEEECCCCSCCTTSCGGGGCSSHHHHHHHH
T ss_pred cceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHH-HhCCCEEEEcCCcCccccccccccchhhHHHHHHH
Confidence 47999999999999999999999999999999999986432222 2357899998864332211 1222222222
Q ss_pred HHhcchhHHHHHHHHhhcCCCCCCCCCCceEEEEcCcchHHH-HHhhcCCCeEEEeCccHHHHHHHhhcccccccCCCCC
Q 012563 88 NAKCMVPFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQFTH-VADEFKLPTIILQTHSVSGYLGIAAYPFLRDKGYVPI 166 (460)
Q Consensus 88 ~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~~~~-~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~ 166 (460)
...+...+. .+.++.+.. +||+||+|.+.+++. +|+.+|||+|.+.+.+............+..
T Consensus 86 ~~~~~~~~~-~l~~~l~~~--------~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~------ 150 (430)
T 2iyf_A 86 LNDAIQALP-QLADAYADD--------IPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPMW------ 150 (430)
T ss_dssp HHHHHHHHH-HHHHHHTTS--------CCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHHH------
T ss_pred HHHHHHHHH-HHHHHhhcc--------CCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccchh------
Confidence 222222222 233333322 899999998777777 9999999999988664311000000000000
Q ss_pred CCCCCCCccCCCCCCCCCCCCCcccCCCCCcHHHHHHHHh----------hhccCceEEecchHHhhHHHhhcCccccCC
Q 012563 167 QDPQSESPVIEYPPLRVKDIPKLETRYPEYNYPLVSAMVN----------NIKASSGMIWNTFEELEQAALSTLPEEYSG 236 (460)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~s~~~le~~~~~~~~~~~~~ 236 (460)
....+. + .. ..+...+.+... .....+.+++++.+++++. ... ++
T Consensus 151 ------~~~~~~--------~----~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~-~~ 205 (430)
T 2iyf_A 151 ------REPRQT--------E----RG-RAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPH-----ADR-VD 205 (430)
T ss_dssp ------HHHHHS--------H----HH-HHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTT-----GGG-SC
T ss_pred ------hhhccc--------h----HH-HHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCC-----ccc-CC
Confidence 000000 0 00 000001111111 1124567888888877643 222 55
Q ss_pred CC-ceeecccccCCCCCCCCccccccchhhhhccCCCCeEEEEEecccccCCHHHHHHHHHHHHhC-CCCEEEEECCCCC
Q 012563 237 IP-VFPIGPFHKYFPASSSSLLSQDQSSISWLDKQAPKSVIYVSFGSVAAINETEFLEIAWGLANS-RVPFLWVVRPGLV 314 (460)
Q Consensus 237 ~p-v~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~ 314 (460)
.+ ++++||....... ..+|.+..+++++||+++||......+.+..++++++.. +.+++|.++.+..
T Consensus 206 ~~~v~~vG~~~~~~~~-----------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~ 274 (430)
T 2iyf_A 206 EDVYTFVGACQGDRAE-----------EGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKVT 274 (430)
T ss_dssp TTTEEECCCCC----------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---C
T ss_pred CccEEEeCCcCCCCCC-----------CCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCCC
Confidence 56 9999986532110 124554445789999999999854567888899999885 7788888875431
Q ss_pred CCchhhccCchhHHhhhCCCceEEeccchHHHhccCCCcceeeccCchhhHHHHhhCCCeeecCcccchhhHHHHHHHhh
Q 012563 315 DGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPAVGGFLTHSGWNSTLESICEGVPMICQPCLADQMVNARYVSHVW 394 (460)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~l 394 (460)
. +.+ +..++|+.+..|+|+.++|+++++ ||||||+||++||+++|+|+|++|..+||..||+++++ .
T Consensus 275 ~---------~~l-~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~-~ 341 (430)
T 2iyf_A 275 P---------AEL-GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQG-L 341 (430)
T ss_dssp G---------GGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-T
T ss_pred h---------HHh-ccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHH-c
Confidence 1 111 123466799999999999999998 99999999999999999999999999999999999999 5
Q ss_pred ceeEeeCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 012563 395 RVGLHLEG-KLEKKEIETAIRRLMVEAEGQEMRERITCLKKNVDACLRQGGSSHQALGRLVDH 456 (460)
Q Consensus 395 G~G~~~~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 456 (460)
|+|+.+.. .++.+.|.++|.++++| +++++++.++++.+.+ .++.+++++.+.+.
T Consensus 342 g~g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~ 397 (430)
T 2iyf_A 342 GVARKLATEEATADLLRETALALVDD---PEVARRLRRIQAEMAQ----EGGTRRAADLIEAE 397 (430)
T ss_dssp TSEEECCCC-CCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHH----HCHHHHHHHHHHTT
T ss_pred CCEEEcCCCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHh----cCcHHHHHHHHHHH
Confidence 99999986 78999999999999998 8899999999888873 34556666555443
No 16
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=9.1e-37 Score=301.19 Aligned_cols=356 Identities=14% Similarity=0.144 Sum_probs=232.9
Q ss_pred ccccCCCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCCCCCC-----------
Q 012563 6 ESRISPRNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNSPNSCNYPHFDFHSISDGLTD----------- 74 (460)
Q Consensus 6 ~~~~~~~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 74 (460)
.+.=+..+.|||+|++.++.||++|++.||++|.++||+|+++++ . ........|+.++.++.....
T Consensus 12 ~~~~~~~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~-~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 89 (398)
T 3oti_A 12 SSGHIEGRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-E-HADRAAAAGLEVVDVAPDYSAVKVFEQVAKDN 89 (398)
T ss_dssp -------CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-S-CHHHHHTTTCEEEESSTTCCHHHHHHHHHHHC
T ss_pred cccchhhhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-c-hHHHHHhCCCeeEecCCccCHHHHhhhcccCC
Confidence 444556677999999999999999999999999999999999998 3 222223468999998843110
Q ss_pred ---------CCCCC---HHHHHHHHHHhcchhHHHHHHHHhhcCCCCCCCCCCceEEEEcCcchHHH-HHhhcCCCeEEE
Q 012563 75 ---------PSAED---STTILITLNAKCMVPFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQFTH-VADEFKLPTIIL 141 (460)
Q Consensus 75 ---------~~~~~---~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~~~~-~A~~lgiP~v~~ 141 (460)
..... ....+..........+.+.+++. +||+||+|...+++. +|+.+|||++..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~------------~pDlVv~d~~~~~~~~aA~~~giP~v~~ 157 (398)
T 3oti_A 90 PRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDY------------RPDLVVYEQGATVGLLAADRAGVPAVQR 157 (398)
T ss_dssp HHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHH------------CCSEEEEETTCHHHHHHHHHHTCCEEEE
T ss_pred ccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHc------------CCCEEEECchhhHHHHHHHHcCCCEEEE
Confidence 00011 12222222111112222333333 899999998888788 999999999986
Q ss_pred eCccHHHHHHHhhcccccccCCCCCCCCCCCCccCCCCCCCCCCCCCcccCCCCCcHHHHHHHHhhhccCceEEecchHH
Q 012563 142 QTHSVSGYLGIAAYPFLRDKGYVPIQDPQSESPVIEYPPLRVKDIPKLETRYPEYNYPLVSAMVNNIKASSGMIWNTFEE 221 (460)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~ 221 (460)
............ .........+.+..-........+....+.
T Consensus 158 ~~~~~~~~~~~~--------------------------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 199 (398)
T 3oti_A 158 NQSAWRTRGMHR--------------------------------------SIASFLTDLMDKHQVSLPEPVATIESFPPS 199 (398)
T ss_dssp CCTTCCCTTHHH--------------------------------------HHHTTCHHHHHHTTCCCCCCSEEECSSCGG
T ss_pred eccCCCccchhh--------------------------------------HHHHHHHHHHHHcCCCCCCCCeEEEeCCHH
Confidence 644211000000 000001111111110011122333333333
Q ss_pred hhHHHhhcCccccCCCCceeecccccCCCCCCCCccccccchhhhhccCCCCeEEEEEecccccC--CHHHHHHHHHHHH
Q 012563 222 LEQAALSTLPEEYSGIPVFPIGPFHKYFPASSSSLLSQDQSSISWLDKQAPKSVIYVSFGSVAAI--NETEFLEIAWGLA 299 (460)
Q Consensus 222 le~~~~~~~~~~~~~~pv~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~--~~~~~~~~~~al~ 299 (460)
+..+ ... ...|+.++. . . ....+.+|+...+++++|||++||.... ..+.+..+++++.
T Consensus 200 ~~~~-----~~~-~~~~~~~~~-~---~---------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~ 260 (398)
T 3oti_A 200 LLLE-----AEP-EGWFMRWVP-Y---G---------GGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAG 260 (398)
T ss_dssp GGTT-----SCC-CSBCCCCCC-C---C---------CCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHH
T ss_pred HCCC-----CCC-CCCCccccC-C---C---------CCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHH
Confidence 3211 100 112233221 1 0 0112345766556789999999999652 4567888999999
Q ss_pred hCCCCEEEEECCCCCCCchhhccCchhHHhhhCCCceEEeccchHHHhccCCCcceeeccCchhhHHHHhhCCCeeecCc
Q 012563 300 NSRVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPAVGGFLTHSGWNSTLESICEGVPMICQPC 379 (460)
Q Consensus 300 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~v~~P~ 379 (460)
+.+.+++|+.++... +.+..+ ++|+++..|+|+.++|+++++ ||||||.||++||+++|+|+|++|.
T Consensus 261 ~~~~~~v~~~g~~~~---~~l~~~--------~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~ 327 (398)
T 3oti_A 261 EVDADFVLALGDLDI---SPLGTL--------PRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPD 327 (398)
T ss_dssp TSSSEEEEECTTSCC---GGGCSC--------CTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC
T ss_pred cCCCEEEEEECCcCh---hhhccC--------CCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCC
Confidence 889999998877531 112223 455699999999999999998 9999999999999999999999999
Q ss_pred ccchhhHH--HHHHHhhceeEeeCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 012563 380 LADQMVNA--RYVSHVWRVGLHLEG-KLEKKEIETAIRRLMVEAEGQEMRERITCLKKNVDACLRQGGSSHQALGRLVDH 456 (460)
Q Consensus 380 ~~DQ~~na--~~v~~~lG~G~~~~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 456 (460)
..||..|| +++++ .|+|+.++. +.+++.|. ++++| ++++++++++++.+. ...+..+.++.+.+.
T Consensus 328 ~~dq~~~a~~~~~~~-~g~g~~~~~~~~~~~~l~----~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~l 395 (398)
T 3oti_A 328 PRDQFQHTAREAVSR-RGIGLVSTSDKVDADLLR----RLIGD---ESLRTAAREVREEMV----ALPTPAETVRRIVER 395 (398)
T ss_dssp TTCCSSCTTHHHHHH-HTSEEECCGGGCCHHHHH----HHHHC---HHHHHHHHHHHHHHH----TSCCHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHH-CCCEEeeCCCCCCHHHHH----HHHcC---HHHHHHHHHHHHHHH----hCCCHHHHHHHHHHH
Confidence 99999999 99999 599999987 77888777 78888 899999999999988 677777777776655
Q ss_pred H
Q 012563 457 I 457 (460)
Q Consensus 457 ~ 457 (460)
+
T Consensus 396 ~ 396 (398)
T 3oti_A 396 I 396 (398)
T ss_dssp H
T ss_pred h
Confidence 4
No 17
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=2.8e-36 Score=297.66 Aligned_cols=352 Identities=14% Similarity=0.140 Sum_probs=218.0
Q ss_pred CCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCCCCC-------------CCCC
Q 012563 11 PRNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNSPNSCNYPHFDFHSISDGLT-------------DPSA 77 (460)
Q Consensus 11 ~~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~ 77 (460)
...+|||+|++.++.||++|++.||++|+++||+|++++++...+.. ...|+.++.++.... ....
T Consensus 12 ~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (398)
T 4fzr_A 12 RGSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTV-TGAGLPFAPTCPSLDMPEVLSWDREGNRTTMP 90 (398)
T ss_dssp ---CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHH-HHTTCCEEEEESSCCHHHHHSBCTTSCBCCCC
T ss_pred CCCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHH-HhCCCeeEecCCccchHhhhhhhccCcccccc
Confidence 45579999999999999999999999999999999999984322221 235778877763110 0001
Q ss_pred CCHHHHH----HHHHHhcchhHHHHHHHHhhcCCCCCCCCCCceEEEEcCcchHHH-HHhhcCCCeEEEeCccHHHHHHH
Q 012563 78 EDSTTIL----ITLNAKCMVPFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQFTH-VADEFKLPTIILQTHSVSGYLGI 152 (460)
Q Consensus 78 ~~~~~~~----~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~~~~-~A~~lgiP~v~~~~~~~~~~~~~ 152 (460)
......+ ..+.......+.+..+.+.+. +||+|++|...+++. +|+.+|||++.+...........
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~ 161 (398)
T 4fzr_A 91 REEKPLLEHIGRGYGRLVLRMRDEALALAERW---------KPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIK 161 (398)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHH
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHhC---------CCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhh
Confidence 1111111 111111112222222222222 899999998778788 99999999998776532111000
Q ss_pred hhcccccccCCCCCCCCCCCCccCCCCCCCCCCCCCcccCCCCCcHHHHHHHHhh-----hccCceEEecchHHhhHHHh
Q 012563 153 AAYPFLRDKGYVPIQDPQSESPVIEYPPLRVKDIPKLETRYPEYNYPLVSAMVNN-----IKASSGMIWNTFEELEQAAL 227 (460)
Q Consensus 153 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~s~~~le~~~~ 227 (460)
.. ....+...... .......+....+.+...
T Consensus 162 ~~------------------------------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 197 (398)
T 4fzr_A 162 SA------------------------------------------GVGELAPELAELGLTDFPDPLLSIDVCPPSMEAQ-- 197 (398)
T ss_dssp HH------------------------------------------HHHHTHHHHHTTTCSSCCCCSEEEECSCGGGC----
T ss_pred HH------------------------------------------HHHHHHHHHHHcCCCCCCCCCeEEEeCChhhCCC--
Confidence 00 00000000000 011123343444444322
Q ss_pred hcCccccCCCCceeecccccCCCCCCCCccccccchhhhhccCCCCeEEEEEecccccC--------CHHHHHHHHHHHH
Q 012563 228 STLPEEYSGIPVFPIGPFHKYFPASSSSLLSQDQSSISWLDKQAPKSVIYVSFGSVAAI--------NETEFLEIAWGLA 299 (460)
Q Consensus 228 ~~~~~~~~~~pv~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~--------~~~~~~~~~~al~ 299 (460)
... ...|+.++++.. ...++.+|+...+++++|||++||.... ..+.+..+++++.
T Consensus 198 ---~~~-~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~ 261 (398)
T 4fzr_A 198 ---PKP-GTTKMRYVPYNG------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELP 261 (398)
T ss_dssp -----C-CCEECCCCCCCC------------SSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGG
T ss_pred ---CCC-CCCCeeeeCCCC------------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHH
Confidence 100 112233332210 1112456776656789999999999753 2356788999998
Q ss_pred hCCCCEEEEECCCCCCCchhhccCchhHHhhhCCCceEEeccchHHHhccCCCcceeeccCchhhHHHHhhCCCeeecCc
Q 012563 300 NSRVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPAVGGFLTHSGWNSTLESICEGVPMICQPC 379 (460)
Q Consensus 300 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~v~~P~ 379 (460)
+.+.+++|+.++.... .+. ..++|+++.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|.
T Consensus 262 ~~~~~~v~~~~~~~~~---~l~--------~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~ 328 (398)
T 4fzr_A 262 KLGFEVVVAVSDKLAQ---TLQ--------PLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPV 328 (398)
T ss_dssp GGTCEEEECCCC-------------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCC
T ss_pred hCCCEEEEEeCCcchh---hhc--------cCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCC
Confidence 8888999887765311 122 23456699999999999999999 9999999999999999999999999
Q ss_pred ccchhhHHHHHHHhhceeEeeCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHH
Q 012563 380 LADQMVNARYVSHVWRVGLHLEG-KLEKKEIETAIRRLMVEAEGQEMRERITCLKKNVDACLRQGGSSHQALGRL 453 (460)
Q Consensus 380 ~~DQ~~na~~v~~~lG~G~~~~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~ 453 (460)
..||+.|++++++ .|+|+.++. +++++.|.++|.++++| +++++++++.++.+. ++.+..+.++.+
T Consensus 329 ~~~q~~~a~~~~~-~g~g~~~~~~~~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~l 395 (398)
T 4fzr_A 329 IAEVWDSARLLHA-AGAGVEVPWEQAGVESVLAACARIRDD---SSYVGNARRLAAEMA----TLPTPADIVRLI 395 (398)
T ss_dssp SGGGHHHHHHHHH-TTSEEECC-------CHHHHHHHHHHC---THHHHHHHHHHHHHT----TSCCHHHHHHHH
T ss_pred chhHHHHHHHHHH-cCCEEecCcccCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHH----cCCCHHHHHHHH
Confidence 9999999999999 599999987 78999999999999999 899999999998887 556555554443
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=9.4e-35 Score=286.06 Aligned_cols=349 Identities=13% Similarity=0.181 Sum_probs=229.5
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeC-CCCCCCCC------C--------C
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNSPNSCNYPHFDFHSI-SDGLTDPS------A--------E 78 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------~--------~ 78 (460)
+|||+|++.++.||++|++.||++|.++||+|++++++...+.. ...|+.++.+ +....... . .
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATA-HGAGLTTAGIRGNDRTGDTGGTTQLRFPNPAFGQR 79 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHH-HHBTCEEEEC--------------CCSCCGGGGCT
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHH-HhCCCceeeecCCccchhhhhhhcccccccccccc
Confidence 59999999999999999999999999999999999974221111 2357888877 32110000 0 0
Q ss_pred --C-HHHHHHHHHHhc-------chhHHHHHHHHhhcCCCCCCCCCCceEEEEcCcchHHH-HHhhcCCCeEEEeCccHH
Q 012563 79 --D-STTILITLNAKC-------MVPFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQFTH-VADEFKLPTIILQTHSVS 147 (460)
Q Consensus 79 --~-~~~~~~~~~~~~-------~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~~~~-~A~~lgiP~v~~~~~~~~ 147 (460)
. ....+......+ ...+.+.+++. +||+||+|...+.+. +|+.+|||++.+......
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~------------~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~ 147 (391)
T 3tsa_A 80 DTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAW------------RPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDP 147 (391)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------CCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCC
T ss_pred cchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhc------------CCCEEEeCcchhHHHHHHHHhCCCEEEEecCCcc
Confidence 0 111111111111 11122233333 899999998777777 999999999987654211
Q ss_pred HHHHHhhcccccccCCCCCCCCCCCCccCCCCCCCCCCCCCcccCCCCCcHHHHHHHHhhhc-----cCceEEecchHHh
Q 012563 148 GYLGIAAYPFLRDKGYVPIQDPQSESPVIEYPPLRVKDIPKLETRYPEYNYPLVSAMVNNIK-----ASSGMIWNTFEEL 222 (460)
Q Consensus 148 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~s~~~l 222 (460)
..... .......+.+...... ..+..+....+++
T Consensus 148 ~~~~~-----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (391)
T 3tsa_A 148 TAGPF-----------------------------------------SDRAHELLDPVCRHHGLTGLPTPELILDPCPPSL 186 (391)
T ss_dssp TTTHH-----------------------------------------HHHHHHHHHHHHHHTTSSSSCCCSEEEECSCGGG
T ss_pred ccccc-----------------------------------------cchHHHHHHHHHHHcCCCCCCCCceEEEecChhh
Confidence 10000 0000111111111111 1133444444444
Q ss_pred hHHHhhcCccccCCCCceeecccccCCCCCCCCccccccchhhhhccCCCCeEEEEEeccccc--CC-HHHHHHHHHHHH
Q 012563 223 EQAALSTLPEEYSGIPVFPIGPFHKYFPASSSSLLSQDQSSISWLDKQAPKSVIYVSFGSVAA--IN-ETEFLEIAWGLA 299 (460)
Q Consensus 223 e~~~~~~~~~~~~~~pv~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~--~~-~~~~~~~~~al~ 299 (460)
+.. ... ...++.|+ |.. ....+.+|+...+++++||+++||... .. .+.+..++++ .
T Consensus 187 ~~~-----~~~-~~~~~~~~-p~~------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~ 246 (391)
T 3tsa_A 187 QAS-----DAP-QGAPVQYV-PYN------------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-T 246 (391)
T ss_dssp SCT-----TSC-CCEECCCC-CCC------------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-H
T ss_pred cCC-----CCC-ccCCeeee-cCC------------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-c
Confidence 311 111 11223443 111 111234677655678999999999854 23 6778888888 7
Q ss_pred hC-CCCEEEEECCCCCCCchhhccCchhHHhhhCCCceEEeccchHHHhccCCCcceeeccCchhhHHHHhhCCCeeecC
Q 012563 300 NS-RVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPAVGGFLTHSGWNSTLESICEGVPMICQP 378 (460)
Q Consensus 300 ~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~v~~P 378 (460)
+. +.+++|+.++... +.+. ..++|+++..|+|+.++|+++++ ||||||.||++||+++|+|+|++|
T Consensus 247 ~~p~~~~v~~~~~~~~---~~l~--------~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p 313 (391)
T 3tsa_A 247 ELPGVEAVIAVPPEHR---ALLT--------DLPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLP 313 (391)
T ss_dssp TSTTEEEEEECCGGGG---GGCT--------TCCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECC
T ss_pred cCCCeEEEEEECCcch---hhcc--------cCCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecC
Confidence 77 6788887765421 1111 22456699999999999999998 999999999999999999999999
Q ss_pred cccchhhHHHHHHHhhceeEeeCC---ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 012563 379 CLADQMVNARYVSHVWRVGLHLEG---KLEKKEIETAIRRLMVEAEGQEMRERITCLKKNVDACLRQGGSSHQALGRLVD 455 (460)
Q Consensus 379 ~~~DQ~~na~~v~~~lG~G~~~~~---~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 455 (460)
...||+.|++++++ .|+|+.+.. ..+++.|.++|.++++| ++++++++++++.+. ++.+..++++.+.+
T Consensus 314 ~~~~q~~~a~~~~~-~g~g~~~~~~~~~~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~ 385 (391)
T 3tsa_A 314 QYFDQFDYARNLAA-AGAGICLPDEQAQSDHEQFTDSIATVLGD---TGFAAAAIKLSDEIT----AMPHPAALVRTLEN 385 (391)
T ss_dssp CSTTHHHHHHHHHH-TTSEEECCSHHHHTCHHHHHHHHHHHHTC---THHHHHHHHHHHHHH----TSCCHHHHHHHHHH
T ss_pred CcccHHHHHHHHHH-cCCEEecCcccccCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH----cCCCHHHHHHHHHH
Confidence 99999999999999 599999974 37999999999999999 899999999998887 67777777776655
Q ss_pred HH
Q 012563 456 HI 457 (460)
Q Consensus 456 ~~ 457 (460)
.+
T Consensus 386 ~~ 387 (391)
T 3tsa_A 386 TA 387 (391)
T ss_dssp C-
T ss_pred HH
Confidence 44
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=7.3e-33 Score=274.42 Aligned_cols=362 Identities=16% Similarity=0.188 Sum_probs=238.1
Q ss_pred ccccCCCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCCCC------------C
Q 012563 6 ESRISPRNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNSPNSCNYPHFDFHSISDGL------------T 73 (460)
Q Consensus 6 ~~~~~~~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~ 73 (460)
+++-+..++|||++++.++.||++|++.||++|+++||+|++++++.. .......|+.++.++..+ .
T Consensus 12 ~~~~~~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 90 (412)
T 3otg_A 12 SSGHIEGRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGF-AGTLRKLGFEPVATGMPVFDGFLAALRIRFD 90 (412)
T ss_dssp ------CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGG-HHHHHHTTCEEEECCCCHHHHHHHHHHHHHS
T ss_pred ccCCcccceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHH-HHHHHhcCCceeecCcccccchhhhhhhhhc
Confidence 445556678999999999999999999999999999999999998532 111123588998887410 0
Q ss_pred CC--CCCC-------HHHHHHHH-HHhcchhHHHHHHHHhhcCCCCCCCCCCceEEEEcCcchHHH-HHhhcCCCeEEEe
Q 012563 74 DP--SAED-------STTILITL-NAKCMVPFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQFTH-VADEFKLPTIILQ 142 (460)
Q Consensus 74 ~~--~~~~-------~~~~~~~~-~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~~~~-~A~~lgiP~v~~~ 142 (460)
.. .... ....+... .......+...+++. +||+||+|.....+. +|+.+|||+|...
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~------------~pDvVv~~~~~~~~~~aa~~~giP~v~~~ 158 (412)
T 3otg_A 91 TDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERL------------RPDLVVQEISNYGAGLAALKAGIPTICHG 158 (412)
T ss_dssp CSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHH------------CCSEEEEETTCHHHHHHHHHHTCCEEEEC
T ss_pred ccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhc------------CCCEEEECchhhHHHHHHHHcCCCEEEec
Confidence 00 0001 11111111 111111222333333 899999997777777 9999999999865
Q ss_pred CccHHHHHHHhhcccccccCCCCCCCCCCCCccCCCCCCCCCCCCCcccCCCCCcHHHHHHHHhh----------hccCc
Q 012563 143 THSVSGYLGIAAYPFLRDKGYVPIQDPQSESPVIEYPPLRVKDIPKLETRYPEYNYPLVSAMVNN----------IKASS 212 (460)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 212 (460)
........... .....+.+.... ...++
T Consensus 159 ~~~~~~~~~~~------------------------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~d 196 (412)
T 3otg_A 159 VGRDTPDDLTR------------------------------------------SIEEEVRGLAQRLGLDLPPGRIDGFGN 196 (412)
T ss_dssp CSCCCCSHHHH------------------------------------------HHHHHHHHHHHHTTCCCCSSCCGGGGC
T ss_pred ccccCchhhhH------------------------------------------HHHHHHHHHHHHcCCCCCcccccCCCC
Confidence 54221000000 000011111111 12233
Q ss_pred eEEecchHHhhHHHhhcCccccCCCCceeecccccCCCCCCCCccccccchhhh-hccCCCCeEEEEEecccccCCHHHH
Q 012563 213 GMIWNTFEELEQAALSTLPEEYSGIPVFPIGPFHKYFPASSSSLLSQDQSSISW-LDKQAPKSVIYVSFGSVAAINETEF 291 (460)
Q Consensus 213 ~~l~~s~~~le~~~~~~~~~~~~~~pv~~vGpl~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~~v~vs~GS~~~~~~~~~ 291 (460)
.++..+..+++...-.... .+.|+.++++- ......+| ....+++++||+++||......+.+
T Consensus 197 ~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~ 260 (412)
T 3otg_A 197 PFIDIFPPSLQEPEFRARP---RRHELRPVPFA-------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVL 260 (412)
T ss_dssp CEEECSCGGGSCHHHHTCT---TEEECCCCCCC-------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHH
T ss_pred eEEeeCCHHhcCCcccCCC---CcceeeccCCC-------------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHH
Confidence 4454444444322000000 01123332211 01113456 3333578999999999975567788
Q ss_pred HHHHHHHHhCCCCEEEEECCCCCCCchhhccCchhHHhhhCCCceEEeccchHHHhccCCCcceeeccCchhhHHHHhhC
Q 012563 292 LEIAWGLANSRVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPAVGGFLTHSGWNSTLESICEG 371 (460)
Q Consensus 292 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~~s~~eal~~G 371 (460)
..+++++.+.+.+++|+.++.... +.+..+ ++|+.+..|+|+.++|+++++ ||+|||+||++||+++|
T Consensus 261 ~~~~~~l~~~~~~~~~~~g~~~~~--~~l~~~--------~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G 328 (412)
T 3otg_A 261 RAAIDGLAGLDADVLVASGPSLDV--SGLGEV--------PANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAG 328 (412)
T ss_dssp HHHHHHHHTSSSEEEEECCSSCCC--TTCCCC--------CTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEEEECCCCCh--hhhccC--------CCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhC
Confidence 889999998888898888765311 112222 455689999999999999999 99999999999999999
Q ss_pred CCeeecCcccchhhHHHHHHHhhceeEeeCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHH
Q 012563 372 VPMICQPCLADQMVNARYVSHVWRVGLHLEG-KLEKKEIETAIRRLMVEAEGQEMRERITCLKKNVDACLRQGGSSHQAL 450 (460)
Q Consensus 372 vP~v~~P~~~DQ~~na~~v~~~lG~G~~~~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~ 450 (460)
+|+|++|...||..|++++++. |.|..+.. +++++.|.++|.++++| +++++++.+.++.+. +..+.++.+
T Consensus 329 ~P~v~~p~~~~q~~~~~~v~~~-g~g~~~~~~~~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~ 400 (412)
T 3otg_A 329 VPQLSFPWAGDSFANAQAVAQA-GAGDHLLPDNISPDSVSGAAKRLLAE---ESYRAGARAVAAEIA----AMPGPDEVV 400 (412)
T ss_dssp CCEEECCCSTTHHHHHHHHHHH-TSEEECCGGGCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----HSCCHHHHH
T ss_pred CCEEecCCchhHHHHHHHHHHc-CCEEecCcccCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHh----cCCCHHHHH
Confidence 9999999999999999999995 99999987 78999999999999999 889999988888887 566788887
Q ss_pred HHHHHHHh
Q 012563 451 GRLVDHIL 458 (460)
Q Consensus 451 ~~~~~~~~ 458 (460)
+.+.+.+.
T Consensus 401 ~~~~~l~~ 408 (412)
T 3otg_A 401 RLLPGFAS 408 (412)
T ss_dssp TTHHHHHC
T ss_pred HHHHHHhc
Confidence 77776654
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=6.3e-30 Score=248.59 Aligned_cols=308 Identities=15% Similarity=0.155 Sum_probs=190.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCCCC-CCCCCCceEEeCCC-CCCCCCCCCHHHHHHHHHHhc
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNSPN-SCNYPHFDFHSISD-GLTDPSAEDSTTILITLNAKC 91 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 91 (460)
+.||+|...|+.||++|+++||++|.++||+|+|+++....+. .....|++++.++. ++..............+....
T Consensus 2 ~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 81 (365)
T 3s2u_A 2 KGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLELLKSL 81 (365)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGGTCCEEECC--------------CHHHHHHHH
T ss_pred CCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhcCCcEEEEECCCcCCCCHHHHHHHHHHHHHHH
Confidence 3589999988889999999999999999999999998543211 12235788888873 222111111111111111111
Q ss_pred chhHHHHHHHHhhcCCCCCCCCCCceEEEEcCcchHHH---HHhhcCCCeEEEeCccHHHHHHHhhcccccccCCCCCCC
Q 012563 92 MVPFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQFTH---VADEFKLPTIILQTHSVSGYLGIAAYPFLRDKGYVPIQD 168 (460)
Q Consensus 92 ~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~~~~---~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 168 (460)
. .+...+++. +||+||++......+ +|+.+|||+++.-....
T Consensus 82 ~-~~~~~l~~~------------~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n~~---------------------- 126 (365)
T 3s2u_A 82 F-QALRVIRQL------------RPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNAV---------------------- 126 (365)
T ss_dssp H-HHHHHHHHH------------CCSEEEECSSSTHHHHHHHHHHTTCCEEEEECSSS----------------------
T ss_pred H-HHHHHHHhc------------CCCEEEEcCCcchHHHHHHHHHcCCCEEEEecchh----------------------
Confidence 1 122344444 899999997655443 78999999997432100
Q ss_pred CCCCCccCCCCCCCCCCCCCcccCCCCCcHHHHHHHHhhhccCceEEecchHHhhHHHhhcCccccCCCCceeec-cccc
Q 012563 169 PQSESPVIEYPPLRVKDIPKLETRYPEYNYPLVSAMVNNIKASSGMIWNTFEELEQAALSTLPEEYSGIPVFPIG-PFHK 247 (460)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~pv~~vG-pl~~ 247 (460)
+ ....++.. +.++.+ +.++++.. . ....++++| |+..
T Consensus 127 -------~----------------------G~~nr~l~--~~a~~v-~~~~~~~~-------~---~~~k~~~~g~pvr~ 164 (365)
T 3s2u_A 127 -------A----------------------GTANRSLA--PIARRV-CEAFPDTF-------P---ASDKRLTTGNPVRG 164 (365)
T ss_dssp -------C----------------------CHHHHHHG--GGCSEE-EESSTTSS-------C---C---CEECCCCCCG
T ss_pred -------h----------------------hhHHHhhc--ccccee-eecccccc-------c---CcCcEEEECCCCch
Confidence 0 01111111 122223 23333210 1 113367777 3332
Q ss_pred CCCCCCCCccccccchhhhhccCCCCeEEEEEecccccCCHHHHHHHHHHHHhC----CCCEEEEECCCCCCCchhhccC
Q 012563 248 YFPASSSSLLSQDQSSISWLDKQAPKSVIYVSFGSVAAINETEFLEIAWGLANS----RVPFLWVVRPGLVDGVEWLEAL 323 (460)
Q Consensus 248 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~~~~~ 323 (460)
.... .. ..+....+++++|+|..||.... ...+.+.+++... +..+++.++... .+.+
T Consensus 165 ~~~~-------~~---~~~~~~~~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi~~~G~~~------~~~~ 226 (365)
T 3s2u_A 165 ELFL-------DA---HARAPLTGRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIRHQAGRQH------AEIT 226 (365)
T ss_dssp GGCC-------CT---TSSCCCTTSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEEEECCTTT------HHHH
T ss_pred hhcc-------ch---hhhcccCCCCcEEEEECCcCCcc--ccchhhHHHHHhcccccceEEEEecCccc------cccc
Confidence 2211 00 11112234678999999998763 2334456666654 345666666543 1111
Q ss_pred chhHHhhhCCCceEEeccchH-HHhccCCCcceeeccCchhhHHHHhhCCCeeecCcc----cchhhHHHHHHHhhceeE
Q 012563 324 PKGYLEMVDGRGYIVQWAPQQ-QVLAHPAVGGFLTHSGWNSTLESICEGVPMICQPCL----ADQMVNARYVSHVWRVGL 398 (460)
Q Consensus 324 ~~~~~~~~~~~~~~~~~vp~~-~lL~~~~~~~~I~HGG~~s~~eal~~GvP~v~~P~~----~DQ~~na~~v~~~lG~G~ 398 (460)
.+.+ ...+.++.+..|++++ ++|..+|+ +|||+|.+|++|++++|+|+|++|+. .+|..||+++++. |+|.
T Consensus 227 ~~~~-~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~-G~a~ 302 (365)
T 3s2u_A 227 AERY-RTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRS-GAGR 302 (365)
T ss_dssp HHHH-HHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTT-TSEE
T ss_pred ccee-cccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHC-CCEE
Confidence 1222 2334677889999974 69999999 99999999999999999999999974 5899999999995 9999
Q ss_pred eeCC-ccCHHHHHHHHHHHhccc
Q 012563 399 HLEG-KLEKKEIETAIRRLMVEA 420 (460)
Q Consensus 399 ~~~~-~~~~~~l~~~i~~ll~~~ 420 (460)
.++. +++++.|.++|.++++|.
T Consensus 303 ~l~~~~~~~~~L~~~i~~ll~d~ 325 (365)
T 3s2u_A 303 LLPQKSTGAAELAAQLSEVLMHP 325 (365)
T ss_dssp ECCTTTCCHHHHHHHHHHHHHCT
T ss_pred EeecCCCCHHHHHHHHHHHHCCH
Confidence 9987 899999999999999983
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.94 E-value=6.7e-27 Score=202.20 Aligned_cols=159 Identities=23% Similarity=0.404 Sum_probs=133.9
Q ss_pred cchhhhhccCCCCeEEEEEeccccc-CCHHHHHHHHHHHHhCCCCEEEEECCCCCCCchhhccCchhHHhhhCCCceEEe
Q 012563 261 QSSISWLDKQAPKSVIYVSFGSVAA-INETEFLEIAWGLANSRVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQ 339 (460)
Q Consensus 261 ~~l~~~l~~~~~~~~v~vs~GS~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (460)
.++.+|++..+++++|||++||... ...+.+..+++++.+.+.+++|+.++.. ...+ ++|+++..
T Consensus 9 ~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~------~~~~--------~~~v~~~~ 74 (170)
T 2o6l_A 9 KEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK------PDTL--------GLNTRLYK 74 (170)
T ss_dssp HHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC------CTTC--------CTTEEEES
T ss_pred HHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC------cccC--------CCcEEEec
Confidence 4489999876678999999999974 4677888899999888889999887543 1112 34568999
Q ss_pred ccchHHHhccCCCcceeeccCchhhHHHHhhCCCeeecCcccchhhHHHHHHHhhceeEeeCC-ccCHHHHHHHHHHHhc
Q 012563 340 WAPQQQVLAHPAVGGFLTHSGWNSTLESICEGVPMICQPCLADQMVNARYVSHVWRVGLHLEG-KLEKKEIETAIRRLMV 418 (460)
Q Consensus 340 ~vp~~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~~~~-~~~~~~l~~~i~~ll~ 418 (460)
|+|+.+++.|+.+++||||||+||++|++++|+|+|++|...||..||+++++ .|+|+.++. +++.++|.++|.++++
T Consensus 75 ~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~~~~~~~~~l~~~i~~ll~ 153 (170)
T 2o6l_A 75 WIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVDFNTMSSTDLLNALKRVIN 153 (170)
T ss_dssp SCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEeccccCCHHHHHHHHHHHHc
Confidence 99999999554445599999999999999999999999999999999999999 599999987 7899999999999999
Q ss_pred cchHHHHHHHHHHHHHHHH
Q 012563 419 EAEGQEMRERITCLKKNVD 437 (460)
Q Consensus 419 ~~~~~~~~~~a~~l~~~~~ 437 (460)
| ++|+++++++++.++
T Consensus 154 ~---~~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 154 D---PSYKENVMKLSRIQH 169 (170)
T ss_dssp C---HHHHHHHHHHC----
T ss_pred C---HHHHHHHHHHHHHhh
Confidence 8 899999999998876
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.87 E-value=2.7e-20 Score=180.75 Aligned_cols=337 Identities=12% Similarity=0.099 Sum_probs=201.5
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCCC-CCCCCCCceEEeCCCC-CCCCCCCCHHHHHHHHHHh-
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNSP-NSCNYPHFDFHSISDG-LTDPSAEDSTTILITLNAK- 90 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~- 90 (460)
+|||++++.+..||..+++.||++|.++||+|++++...... ......|++++.++.. +.. ......+......
T Consensus 6 ~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 82 (364)
T 1f0k_A 6 GKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRG---KGIKALIAAPLRIF 82 (364)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGTCEEEECCCCCCTT---CCHHHHHTCHHHHH
T ss_pred CcEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccccCCceEEecCCccCc---CccHHHHHHHHHHH
Confidence 489999998878999999999999999999999999853211 1111247888777632 111 1111111111000
Q ss_pred -cchhHHHHHHHHhhcCCCCCCCCCCceEEEEcCcc--hHHH-HHhhcCCCeEEEeCccHHHHHHHhhcccccccCCCCC
Q 012563 91 -CMVPFRNCLAKLVSNTNNNNAQEDSVACLITDFLW--QFTH-VADEFKLPTIILQTHSVSGYLGIAAYPFLRDKGYVPI 166 (460)
Q Consensus 91 -~~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~--~~~~-~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~ 166 (460)
....+...+++. +||+|+++... ..+. ++..+|+|+|........
T Consensus 83 ~~~~~l~~~l~~~------------~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~------------------- 131 (364)
T 1f0k_A 83 NAWRQARAIMKAY------------KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIA------------------- 131 (364)
T ss_dssp HHHHHHHHHHHHH------------CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSSC-------------------
T ss_pred HHHHHHHHHHHhc------------CCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCCC-------------------
Confidence 001122233333 89999998643 2344 888899999864332100
Q ss_pred CCCCCCCccCCCCCCCCCCCCCcccCCCCCcHHHHHHHHhhhccCceEEecchHHhhHHHhhcCccccCCCCceeecc-c
Q 012563 167 QDPQSESPVIEYPPLRVKDIPKLETRYPEYNYPLVSAMVNNIKASSGMIWNTFEELEQAALSTLPEEYSGIPVFPIGP-F 245 (460)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~pv~~vGp-l 245 (460)
. ...+. ..+.++.++..+.. . ++ ++..+|. +
T Consensus 132 -------------------------~-------~~~~~--~~~~~d~v~~~~~~-~------------~~-~~~~i~n~v 163 (364)
T 1f0k_A 132 -------------------------G-------LTNKW--LAKIATKVMQAFPG-A------------FP-NAEVVGNPV 163 (364)
T ss_dssp -------------------------C-------HHHHH--HTTTCSEEEESSTT-S------------SS-SCEECCCCC
T ss_pred -------------------------c-------HHHHH--HHHhCCEEEecChh-h------------cC-CceEeCCcc
Confidence 0 00011 11233444443221 0 11 3445552 2
Q ss_pred ccCCCCCCCCccccccchhhhhccCCCCeEEEEEecccccCCHHHHHHHHHHHHhC--CCCEEEEECCCCCCCchhhccC
Q 012563 246 HKYFPASSSSLLSQDQSSISWLDKQAPKSVIYVSFGSVAAINETEFLEIAWGLANS--RVPFLWVVRPGLVDGVEWLEAL 323 (460)
Q Consensus 246 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~ 323 (460)
...... +.. ..+.+...+++++++++.|+... .+....+++++... +.++++.++... ...+
T Consensus 164 ~~~~~~------~~~--~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~------~~~l 227 (364)
T 1f0k_A 164 RTDVLA------LPL--PQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGS------QQSV 227 (364)
T ss_dssp CHHHHT------SCC--HHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTC------HHHH
T ss_pred chhhcc------cch--hhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCch------HHHH
Confidence 111000 000 11222222356778888888763 34445555666544 455566666543 1111
Q ss_pred chhHHhhhCCCceEEeccch-HHHhccCCCcceeeccCchhhHHHHhhCCCeeecCcc---cchhhHHHHHHHhhceeEe
Q 012563 324 PKGYLEMVDGRGYIVQWAPQ-QQVLAHPAVGGFLTHSGWNSTLESICEGVPMICQPCL---ADQMVNARYVSHVWRVGLH 399 (460)
Q Consensus 324 ~~~~~~~~~~~~~~~~~vp~-~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~v~~P~~---~DQ~~na~~v~~~lG~G~~ 399 (460)
.+.+.+..-+++.+..|+++ ..++..+++ +|+++|.+++.||+++|+|+|+.|.. .||..|++.+.+. |.|..
T Consensus 228 ~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~-g~g~~ 304 (364)
T 1f0k_A 228 EQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-GAAKI 304 (364)
T ss_dssp HHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-TSEEE
T ss_pred HHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhC-CcEEE
Confidence 11121111157889999954 779999999 99999999999999999999999987 7999999999995 99998
Q ss_pred eCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHhcC
Q 012563 400 LEG-KLEKKEIETAIRRLMVEAEGQEMRERITCLKKNVDACLRQGGSSHQALGRLVDHILSF 460 (460)
Q Consensus 400 ~~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 460 (460)
++. +++.++|.++|.++ | ++.+++..+-+.... +..+.++.++++.+..+++
T Consensus 305 ~~~~d~~~~~la~~i~~l--~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~y~~~ 357 (364)
T 1f0k_A 305 IEQPQLSVDAVANTLAGW--S---RETLLTMAERARAAS----IPDATERVANEVSRVARAL 357 (364)
T ss_dssp CCGGGCCHHHHHHHHHTC--C---HHHHHHHHHHHHHTC----CTTHHHHHHHHHHHHHTTC
T ss_pred eccccCCHHHHHHHHHhc--C---HHHHHHHHHHHHHhh----ccCHHHHHHHHHHHHHHHH
Confidence 886 67799999999998 5 444443333332222 4566777777777776653
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.69 E-value=1e-15 Score=141.41 Aligned_cols=116 Identities=9% Similarity=0.035 Sum_probs=89.5
Q ss_pred CCeEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEECCCCCCCchhhccCchhHHhhh--CCCceEEeccchH-HHhc
Q 012563 272 PKSVIYVSFGSVAAINETEFLEIAWGLANSRVPFLWVVRPGLVDGVEWLEALPKGYLEMV--DGRGYIVQWAPQQ-QVLA 348 (460)
Q Consensus 272 ~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~vp~~-~lL~ 348 (460)
+.+.|+|++|..... .....+++++.... ++.++.+.+.. ..+.+.+.. ..|+.+..|++++ +++.
T Consensus 156 ~~~~ILv~~GG~d~~--~l~~~vl~~L~~~~-~i~vv~G~~~~--------~~~~l~~~~~~~~~v~v~~~~~~m~~~m~ 224 (282)
T 3hbm_A 156 KKYDFFICMGGTDIK--NLSLQIASELPKTK-IISIATSSSNP--------NLKKLQKFAKLHNNIRLFIDHENIAKLMN 224 (282)
T ss_dssp CCEEEEEECCSCCTT--CHHHHHHHHSCTTS-CEEEEECTTCT--------THHHHHHHHHTCSSEEEEESCSCHHHHHH
T ss_pred cCCeEEEEECCCchh--hHHHHHHHHhhcCC-CEEEEECCCch--------HHHHHHHHHhhCCCEEEEeCHHHHHHHHH
Confidence 457899999976542 35556778876544 56666766531 123333222 2478899999975 5999
Q ss_pred cCCCcceeeccCchhhHHHHhhCCCeeecCcccchhhHHHHHHHhhceeEeeCC
Q 012563 349 HPAVGGFLTHSGWNSTLESICEGVPMICQPCLADQMVNARYVSHVWRVGLHLEG 402 (460)
Q Consensus 349 ~~~~~~~I~HGG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~~~~ 402 (460)
.+++ +||+|| +|++|+++.|+|+|++|...+|..||+.+++. |++..+..
T Consensus 225 ~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~~~ 274 (282)
T 3hbm_A 225 ESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEYKY 274 (282)
T ss_dssp TEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEECGG
T ss_pred HCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEcch
Confidence 9999 999999 89999999999999999999999999999994 99998874
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.65 E-value=2.6e-16 Score=139.38 Aligned_cols=139 Identities=11% Similarity=0.061 Sum_probs=97.0
Q ss_pred CCCCeEEEEEecccccCCHHHHHHH-----HHHHHhCC-CCEEEEECCCCCCC-chhhcc---------CchhH------
Q 012563 270 QAPKSVIYVSFGSVAAINETEFLEI-----AWGLANSR-VPFLWVVRPGLVDG-VEWLEA---------LPKGY------ 327 (460)
Q Consensus 270 ~~~~~~v~vs~GS~~~~~~~~~~~~-----~~al~~~~-~~~i~~~~~~~~~~-~~~~~~---------~~~~~------ 327 (460)
.+++++|||+.||.... .+.+..+ +.++...+ .++++.++...... .+.... +|.+.
T Consensus 25 ~~~~~~VlVtgGS~~~~-n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~ 103 (224)
T 2jzc_A 25 IIEEKALFVTCGATVPF-PKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPIDQFGCGDT 103 (224)
T ss_dssp CCCSCCEEEECCSCCSC-HHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCCCSHHHHHTCEECSCCCSSCTTCTTCS
T ss_pred CCCCCEEEEEcCCchHH-HHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhHHHHHHhhhcccccccccccccccccc
Confidence 34679999999998432 3333333 47887777 78999988765210 000000 01000
Q ss_pred -H----hhhCCCceEEeccchH-HHhc-cCCCcceeeccCchhhHHHHhhCCCeeecCcc----cchhhHHHHHHHhhce
Q 012563 328 -L----EMVDGRGYIVQWAPQQ-QVLA-HPAVGGFLTHSGWNSTLESICEGVPMICQPCL----ADQMVNARYVSHVWRV 396 (460)
Q Consensus 328 -~----~~~~~~~~~~~~vp~~-~lL~-~~~~~~~I~HGG~~s~~eal~~GvP~v~~P~~----~DQ~~na~~v~~~lG~ 396 (460)
. ....-++.+..|++++ ++|+ .+++ +|||||+||++|++++|+|+|++|.. .||..||+++++. |+
T Consensus 104 ~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~-G~ 180 (224)
T 2jzc_A 104 ARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVEL-GY 180 (224)
T ss_dssp CEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHH-SC
T ss_pred ccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHC-CC
Confidence 0 0001133456888875 7999 9999 99999999999999999999999984 4799999999994 99
Q ss_pred eEeeCCccCHHHHHHHHHHH
Q 012563 397 GLHLEGKLEKKEIETAIRRL 416 (460)
Q Consensus 397 G~~~~~~~~~~~l~~~i~~l 416 (460)
++.+ +.+.|.++|.++
T Consensus 181 ~~~~----~~~~L~~~i~~l 196 (224)
T 2jzc_A 181 VWSC----APTETGLIAGLR 196 (224)
T ss_dssp CCEE----CSCTTTHHHHHH
T ss_pred EEEc----CHHHHHHHHHHH
Confidence 8765 567777788777
No 25
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.46 E-value=3.3e-11 Score=119.57 Aligned_cols=370 Identities=13% Similarity=0.059 Sum_probs=186.6
Q ss_pred CCCCCcEEEEEcC-----------CCCCChHHHHHHHHHHHhCCCeEEEEeCCCCCCCC---CCCCCceEEeCCCCCCCC
Q 012563 10 SPRNGRRVILFPL-----------PFQGHINPMLQLGSILYSKGFSITIIHTKFNSPNS---CNYPHFDFHSISDGLTDP 75 (460)
Q Consensus 10 ~~~~~~~il~~~~-----------~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 75 (460)
...+.|||++++. ...|+-.....||+.|.++||+|++++........ ....+++++.++......
T Consensus 16 ~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~ 95 (438)
T 3c48_A 16 PRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEG 95 (438)
T ss_dssp ---CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEEETTEEEEEECCSCSSS
T ss_pred cCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccccccCCeEEEEecCCCccc
Confidence 3445689999995 23578889999999999999999999975321111 112577787776321111
Q ss_pred CCC-CHHHHHHHHHHhcchhHHHHHHH-HhhcCCCCCCCCCCceEEEEcCcch--HHH-HHhhcCCCeEEEeCccHHHHH
Q 012563 76 SAE-DSTTILITLNAKCMVPFRNCLAK-LVSNTNNNNAQEDSVACLITDFLWQ--FTH-VADEFKLPTIILQTHSVSGYL 150 (460)
Q Consensus 76 ~~~-~~~~~~~~~~~~~~~~l~~~l~~-l~~~~~~~~~~~~~pDlvI~D~~~~--~~~-~A~~lgiP~v~~~~~~~~~~~ 150 (460)
... .....+..+ ....++. +... . +||+|++..... .+. ++..+++|+|...........
T Consensus 96 ~~~~~~~~~~~~~-------~~~~~~~~~~~~-~-------~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~ 160 (438)
T 3c48_A 96 LSKEELPTQLAAF-------TGGMLSFTRREK-V-------TYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVKN 160 (438)
T ss_dssp CCGGGGGGGHHHH-------HHHHHHHHHHHT-C-------CCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHHS
T ss_pred cchhHHHHHHHHH-------HHHHHHHHHhcc-C-------CCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCccccc
Confidence 100 011111111 1112222 2211 1 599999875332 223 677889999886555321100
Q ss_pred HHhhcccccccCCCCCCCCCCCCccCCCCCCCCCCCCCcccCCCCCcHHHHHH--HHhhhccCceEEecchHHhhHHHhh
Q 012563 151 GIAAYPFLRDKGYVPIQDPQSESPVIEYPPLRVKDIPKLETRYPEYNYPLVSA--MVNNIKASSGMIWNTFEELEQAALS 228 (460)
Q Consensus 151 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~s~~~le~~~~~ 228 (460)
... ............ ....+..++.++..+....+.- ..
T Consensus 161 -----------~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~-~~ 201 (438)
T 3c48_A 161 -----------SYR---------------------------DDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDL-MH 201 (438)
T ss_dssp -----------CC-------------------------------CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHHH-HH
T ss_pred -----------ccc---------------------------cccCCcchHHHHHHHHHHHhcCCEEEEcCHHHHHHH-HH
Confidence 000 000000011111 1233467788888876654321 01
Q ss_pred cCccccCC-CCceeecccccCCCCCCCCccccc--cchhhhhccCCCCeEEEEEecccccCCHHHHHHHHHHHHhC----
Q 012563 229 TLPEEYSG-IPVFPIGPFHKYFPASSSSLLSQD--QSSISWLDKQAPKSVIYVSFGSVAAINETEFLEIAWGLANS---- 301 (460)
Q Consensus 229 ~~~~~~~~-~pv~~vGpl~~~~~~~~~~~~~~~--~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~---- 301 (460)
... ++ .++..|..-.....- ...+.. ..+.+-+.- ++...+++..|+.... +.+..+++++..+
T Consensus 202 ~~g---~~~~k~~vi~ngvd~~~~---~~~~~~~~~~~r~~~~~-~~~~~~i~~~G~~~~~--Kg~~~li~a~~~l~~~~ 272 (438)
T 3c48_A 202 HYD---ADPDRISVVSPGADVELY---SPGNDRATERSRRELGI-PLHTKVVAFVGRLQPF--KGPQVLIKAVAALFDRD 272 (438)
T ss_dssp HHC---CCGGGEEECCCCCCTTTS---CCC----CHHHHHHTTC-CSSSEEEEEESCBSGG--GCHHHHHHHHHHHHHHC
T ss_pred HhC---CChhheEEecCCcccccc---CCcccchhhhhHHhcCC-CCCCcEEEEEeeeccc--CCHHHHHHHHHHHHhhC
Confidence 000 11 224444422211100 000000 012222222 1234456677886642 2233333333322
Q ss_pred -CCCE-EEEECCCCCCCchhhccCchhHHh-hhCCCceEEeccch---HHHhccCCCcceeecc----CchhhHHHHhhC
Q 012563 302 -RVPF-LWVVRPGLVDGVEWLEALPKGYLE-MVDGRGYIVQWAPQ---QQVLAHPAVGGFLTHS----GWNSTLESICEG 371 (460)
Q Consensus 302 -~~~~-i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~vp~---~~lL~~~~~~~~I~HG----G~~s~~eal~~G 371 (460)
+.++ ++.++.....+.. ...+-+-+.+ ...+++.+..|+|+ ..++..+++ +|.-. ..+++.||+++|
T Consensus 273 p~~~~~l~i~G~~~~~g~~-~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G 349 (438)
T 3c48_A 273 PDRNLRVIICGGPSGPNAT-PDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASG 349 (438)
T ss_dssp TTCSEEEEEECCBC-------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTT
T ss_pred CCcceEEEEEeCCCCCCcH-HHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcC
Confidence 1233 3334431100000 0111111111 12467889999986 458889998 77643 346899999999
Q ss_pred CCeeecCcccchhhHHHHHHHhhceeEeeCCccCHHHHHHHHHHHhccch-HHHHHHHHHHHHHHHHHHHhcCCChHHHH
Q 012563 372 VPMICQPCLADQMVNARYVSHVWRVGLHLEGKLEKKEIETAIRRLMVEAE-GQEMRERITCLKKNVDACLRQGGSSHQAL 450 (460)
Q Consensus 372 vP~v~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~ 450 (460)
+|+|+.+. ......+++. +.|..++. -+.+++.++|.++++|.+ ...+.+++++..+.+ +.++.+
T Consensus 350 ~PvI~~~~----~~~~e~i~~~-~~g~~~~~-~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~--------s~~~~~ 415 (438)
T 3c48_A 350 TPVIAARV----GGLPIAVAEG-ETGLLVDG-HSPHAWADALATLLDDDETRIRMGEDAVEHARTF--------SWAATA 415 (438)
T ss_dssp CCEEEESC----TTHHHHSCBT-TTEEEESS-CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH--------HHHHHH
T ss_pred CCEEecCC----CChhHHhhCC-CcEEECCC-CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhC--------CHHHHH
Confidence 99999553 4556666663 67888874 689999999999998843 234555555555442 355666
Q ss_pred HHHHHHHhc
Q 012563 451 GRLVDHILS 459 (460)
Q Consensus 451 ~~~~~~~~~ 459 (460)
+++.+.+++
T Consensus 416 ~~~~~~~~~ 424 (438)
T 3c48_A 416 AQLSSLYND 424 (438)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666665543
No 26
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.46 E-value=3.5e-12 Score=124.54 Aligned_cols=346 Identities=12% Similarity=0.026 Sum_probs=186.3
Q ss_pred CCcEEEEEcC--C--CCCChHHHHHHHHHHHhCCCeEEEEeCCCCCC---CCCCCCCceEEeCCCCCCCCCCCCHHHHHH
Q 012563 13 NGRRVILFPL--P--FQGHINPMLQLGSILYSKGFSITIIHTKFNSP---NSCNYPHFDFHSISDGLTDPSAEDSTTILI 85 (460)
Q Consensus 13 ~~~~il~~~~--~--~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (460)
++|||++++. + ..|.-.-+..+++.| +||+|++++...... ......++.++.++....-. .....
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~- 75 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDKTLDYEVIRWPRSVMLP----TPTTA- 75 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHTTCSSEEEEESSSSCCS----CHHHH-
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhccccceEEEEcccccccc----chhhH-
Confidence 5799999985 3 457778899999999 799999999854332 11224578888877422111 01110
Q ss_pred HHHHhcchhHHHHHHHHhhcCCCCCCCCCCceEEEEcCcchH--HH-HHhhcCCCeEEEeCccHHHHHHHhhcccccccC
Q 012563 86 TLNAKCMVPFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQF--TH-VADEFKLPTIILQTHSVSGYLGIAAYPFLRDKG 162 (460)
Q Consensus 86 ~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~~--~~-~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 162 (460)
..+...+++. +||+|++....+. .. ++..+|+|.+++.........
T Consensus 76 -------~~l~~~~~~~------------~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~------------ 124 (394)
T 3okp_A 76 -------HAMAEIIRER------------EIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGW------------ 124 (394)
T ss_dssp -------HHHHHHHHHT------------TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHH------------
T ss_pred -------HHHHHHHHhc------------CCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhh------------
Confidence 1122233333 8999998654433 33 788899996554433211100
Q ss_pred CCCCCCCCCCCccCCCCCCCCCCCCCcccCCCCCcHHHHHHHHhhhccCceEEecchHHhhHHHhhcCccccCCCCceee
Q 012563 163 YVPIQDPQSESPVIEYPPLRVKDIPKLETRYPEYNYPLVSAMVNNIKASSGMIWNTFEELEQAALSTLPEEYSGIPVFPI 242 (460)
Q Consensus 163 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~pv~~v 242 (460)
.. ............+.++.++..|....+.- .....+ ..++..+
T Consensus 125 ------------------------------~~--~~~~~~~~~~~~~~~d~ii~~s~~~~~~~-~~~~~~---~~~~~vi 168 (394)
T 3okp_A 125 ------------------------------SM--LPGSRQSLRKIGTEVDVLTYISQYTLRRF-KSAFGS---HPTFEHL 168 (394)
T ss_dssp ------------------------------TT--SHHHHHHHHHHHHHCSEEEESCHHHHHHH-HHHHCS---SSEEEEC
T ss_pred ------------------------------hh--cchhhHHHHHHHHhCCEEEEcCHHHHHHH-HHhcCC---CCCeEEe
Confidence 00 00111112334467788888776644321 010111 1234444
Q ss_pred cccc-cCCCCCCCCccccccchhhhhccCCCCeEEEEEecccccCCHHHHHHHHHHHHhC-----CCCEEEEECCCCCCC
Q 012563 243 GPFH-KYFPASSSSLLSQDQSSISWLDKQAPKSVIYVSFGSVAAINETEFLEIAWGLANS-----RVPFLWVVRPGLVDG 316 (460)
Q Consensus 243 Gpl~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~ 316 (460)
..-. ..... .........+.+.+.. +++..+++..|+... .+.+..+++++..+ +.++++ ++.+..
T Consensus 169 ~ngv~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~~l~i-~G~g~~-- 240 (394)
T 3okp_A 169 PSGVDVKRFT--PATPEDKSATRKKLGF-TDTTPVIACNSRLVP--RKGQDSLIKAMPQVIAARPDAQLLI-VGSGRY-- 240 (394)
T ss_dssp CCCBCTTTSC--CCCHHHHHHHHHHTTC-CTTCCEEEEESCSCG--GGCHHHHHHHHHHHHHHSTTCEEEE-ECCCTT--
T ss_pred cCCcCHHHcC--CCCchhhHHHHHhcCC-CcCceEEEEEecccc--ccCHHHHHHHHHHHHhhCCCeEEEE-EcCchH--
Confidence 4221 11110 0000111122333322 233455667788654 22233334444322 344444 443321
Q ss_pred chhhccCchhHHhhhCCCceEEeccchHH---HhccCCCcceee-----------ccCchhhHHHHhhCCCeeecCcccc
Q 012563 317 VEWLEALPKGYLEMVDGRGYIVQWAPQQQ---VLAHPAVGGFLT-----------HSGWNSTLESICEGVPMICQPCLAD 382 (460)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~vp~~~---lL~~~~~~~~I~-----------HGG~~s~~eal~~GvP~v~~P~~~D 382 (460)
.+.+..+. ....+++.+..|+|+.+ ++..+++ +|. -|..+++.||+++|+|+|+.+..+
T Consensus 241 ~~~l~~~~----~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~- 313 (394)
T 3okp_A 241 ESTLRRLA----TDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGG- 313 (394)
T ss_dssp HHHHHHHT----GGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTT-
T ss_pred HHHHHHHH----hcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeCCCC-
Confidence 01111111 23346778999997644 7888988 776 555679999999999999966532
Q ss_pred hhhHHHHHHHhhceeEeeCCccCHHHHHHHHHHHhccch-HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHhcC
Q 012563 383 QMVNARYVSHVWRVGLHLEGKLEKKEIETAIRRLMVEAE-GQEMRERITCLKKNVDACLRQGGSSHQALGRLVDHILSF 460 (460)
Q Consensus 383 Q~~na~~v~~~lG~G~~~~~~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 460 (460)
....+.+ |.|..++. -+.+++.++|.++++|.+ ...+.+++++.. .+.-+.++.++++.+.++++
T Consensus 314 ---~~e~i~~--~~g~~~~~-~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~-------~~~~s~~~~~~~~~~~~~~~ 379 (394)
T 3okp_A 314 ---APETVTP--ATGLVVEG-SDVDKLSELLIELLDDPIRRAAMGAAGRAHV-------EAEWSWEIMGERLTNILQSE 379 (394)
T ss_dssp ---GGGGCCT--TTEEECCT-TCHHHHHHHHHHHHTCHHHHHHHHHHHHHHH-------HHHTBHHHHHHHHHHHHHSC
T ss_pred ---hHHHHhc--CCceEeCC-CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-------HHhCCHHHHHHHHHHHHHHh
Confidence 2333334 57777763 589999999999999832 122333333322 23456888888888888764
No 27
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.45 E-value=5.5e-11 Score=117.71 Aligned_cols=379 Identities=12% Similarity=0.058 Sum_probs=193.6
Q ss_pred CCcEEEEEcCC-----CCCChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCC-------------------CCCCceEEeC
Q 012563 13 NGRRVILFPLP-----FQGHINPMLQLGSILYSKGFSITIIHTKFNSPNSC-------------------NYPHFDFHSI 68 (460)
Q Consensus 13 ~~~~il~~~~~-----~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~~~~-------------------~~~~~~~~~~ 68 (460)
++|||++++.. ..|--.-+..||++|+++||+|+++++........ ...|++++.+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 57999999843 34555668999999999999999999753322111 2357777777
Q ss_pred CCCCC-CCCCCC--HHHHHHHHHHhcchhHHHHHHHHhhcCCCCCCCCCCceEEEEcCcchH--HH-HHhhcCCCeEEEe
Q 012563 69 SDGLT-DPSAED--STTILITLNAKCMVPFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQF--TH-VADEFKLPTIILQ 142 (460)
Q Consensus 69 ~~~~~-~~~~~~--~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~~--~~-~A~~lgiP~v~~~ 142 (460)
+.... ...... ...+...+... ...+...++.+..... +||+|.+...... +. ++...|+|+|...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-------~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~ 152 (439)
T 3fro_A 81 GGGLLDSEDVYGPGWDGLIRKAVTF-GRASVLLLNDLLREEP-------LPDVVHFHDWHTVFAGALIKKYFKIPAVFTI 152 (439)
T ss_dssp ESGGGGCSSTTCSHHHHHHHHHHHH-HHHHHHHHHHHTTTSC-------CCSEEEEESGGGHHHHHHHHHHHCCCEEEEE
T ss_pred cchhccccccccCCcchhhhhhHHH-HHHHHHHHHHHhccCC-------CCeEEEecchhhhhhHHHHhhccCCCEEEEe
Confidence 63111 111111 11112222111 1123334444432111 7999999865433 23 7778899998865
Q ss_pred CccHHHHH--HHhhcccccccCCCCCCCCCCCCccCCCCCCCCCCCCCcccCCCCCcHHHHHHHHhhhccCceEEecchH
Q 012563 143 THSVSGYL--GIAAYPFLRDKGYVPIQDPQSESPVIEYPPLRVKDIPKLETRYPEYNYPLVSAMVNNIKASSGMIWNTFE 220 (460)
Q Consensus 143 ~~~~~~~~--~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~ 220 (460)
........ .... .. .+..+. ...... -....+..++.++..|..
T Consensus 153 h~~~~~~~~~~~~~-----~~--------------------~~~~~~------~~~~~~---~~~~~~~~ad~ii~~S~~ 198 (439)
T 3fro_A 153 HRLNKSKLPAFYFH-----EA--------------------GLSELA------PYPDID---PEHTGGYIADIVTTVSRG 198 (439)
T ss_dssp SCCCCCCEEHHHHH-----HT--------------------TCGGGC------CSSEEC---HHHHHHHHCSEEEESCHH
T ss_pred cccccccCchHHhC-----cc--------------------cccccc------ccceee---HhhhhhhhccEEEecCHH
Confidence 55321000 0000 00 000000 000001 122334567777777765
Q ss_pred HhhHHHhhcCccccCCCCceeec-ccccCCCCCCC---CccccccchhhhhccCCCCeEEEEEecccc-c-CCHHHHHHH
Q 012563 221 ELEQAALSTLPEEYSGIPVFPIG-PFHKYFPASSS---SLLSQDQSSISWLDKQAPKSVIYVSFGSVA-A-INETEFLEI 294 (460)
Q Consensus 221 ~le~~~~~~~~~~~~~~pv~~vG-pl~~~~~~~~~---~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~-~-~~~~~~~~~ 294 (460)
..+. ..... +. ...++..|. ++-...-.+.. .......++.+-++- +++ .+++..|+.. . -..+.+...
T Consensus 199 ~~~~-~~~~~-~~-~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~i~~~G~~~~~~Kg~~~li~a 273 (439)
T 3fro_A 199 YLID-EWGFF-RN-FEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGM-DEG-VTFMFIGRFDRGQKGVDVLLKA 273 (439)
T ss_dssp HHHH-THHHH-GG-GTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHHHHHHTC-CSC-EEEEEECCSSCTTBCHHHHHHH
T ss_pred HHHH-Hhhhh-hh-cCCceeecCCCCCchhcCcccccchhhhhHHHHHHHcCC-CCC-cEEEEEcccccccccHHHHHHH
Confidence 4432 11100 00 113344333 22111100000 000011122233332 233 6677788877 4 233444444
Q ss_pred HHHHHhC----CCCEEEEECCCCCCCchhhccCchhHHhhhCCCceEEeccchHH---HhccCCCcceeec----cCchh
Q 012563 295 AWGLANS----RVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQQ---VLAHPAVGGFLTH----SGWNS 363 (460)
Q Consensus 295 ~~al~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~---lL~~~~~~~~I~H----GG~~s 363 (460)
+..+... +.+++ .+|.+. +.....-....++.++++.+..|+++.+ ++..+++ +|.- |-.++
T Consensus 274 ~~~l~~~~~~~~~~l~-i~G~g~----~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~ 346 (439)
T 3fro_A 274 IEILSSKKEFQEMRFI-IIGKGD----PELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLV 346 (439)
T ss_dssp HHHHHTSGGGGGEEEE-EECCCC----HHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHH
T ss_pred HHHHHhcccCCCeEEE-EEcCCC----hhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHH
Confidence 4444332 33333 344332 0000111222223334445568898754 7888888 7743 33479
Q ss_pred hHHHHhhCCCeeecCcccchhhHHHHHHHhhceeEeeCCccCHHHHHHHHHHHhc-cch-HHHHHHHHHHHHHHHHHHHh
Q 012563 364 TLESICEGVPMICQPCLADQMVNARYVSHVWRVGLHLEGKLEKKEIETAIRRLMV-EAE-GQEMRERITCLKKNVDACLR 441 (460)
Q Consensus 364 ~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~l~~~i~~ll~-~~~-~~~~~~~a~~l~~~~~~~~~ 441 (460)
+.||+++|+|+|+.. .......+++ |.|..++. -+.+++.++|.++++ +.+ ...+.+++++..+
T Consensus 347 ~~EAma~G~Pvi~s~----~~~~~e~~~~--~~g~~~~~-~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~------- 412 (439)
T 3fro_A 347 ALEAMCLGAIPIASA----VGGLRDIITN--ETGILVKA-GDPGELANAILKALELSRSDLSKFRENCKKRAM------- 412 (439)
T ss_dssp HHHHHHTTCEEEEES----STHHHHHCCT--TTCEEECT-TCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHH-------
T ss_pred HHHHHHCCCCeEEcC----CCCcceeEEc--CceEEeCC-CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh-------
Confidence 999999999999954 3444555544 67887774 689999999999998 632 3455555555442
Q ss_pred cCCChHHHHHHHHHHHhcC
Q 012563 442 QGGSSHQALGRLVDHILSF 460 (460)
Q Consensus 442 ~~g~~~~~~~~~~~~~~~~ 460 (460)
.-+.+..++++++.++++
T Consensus 413 -~~s~~~~~~~~~~~~~~~ 430 (439)
T 3fro_A 413 -SFSWEKSAERYVKAYTGS 430 (439)
T ss_dssp -TSCHHHHHHHHHHHHHTC
T ss_pred -hCcHHHHHHHHHHHHHHH
Confidence 356888888888887753
No 28
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.35 E-value=1.1e-09 Score=106.81 Aligned_cols=352 Identities=12% Similarity=0.068 Sum_probs=177.5
Q ss_pred CcEEEEEcCCCC-CChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCCCCCCCCCCCHHHHHHHHHHhcc
Q 012563 14 GRRVILFPLPFQ-GHINPMLQLGSILYSKGFSITIIHTKFNSPNSCNYPHFDFHSISDGLTDPSAEDSTTILITLNAKCM 92 (460)
Q Consensus 14 ~~~il~~~~~~~-GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (460)
+.++....+|.. |.-.-...||++|+++||+|++++............++.+..++.............. ...
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~----- 88 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLNKVYPNIYFHEVTVNQYSVFQYPPYDL-ALA----- 88 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC----CCCTTEEEECCCCC----CCSCCHHH-HHH-----
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcccccCCceEEEecccccccccccccccH-HHH-----
Confidence 456777777754 5667788999999999999999998543222223457777766521111000001110 000
Q ss_pred hhHHHHHHHHhhcCCCCCCCCCCceEEEEcCcchH--HH-HHhhc---CCCeEEEeCccHHHHHHHhhcccccccCCCCC
Q 012563 93 VPFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQF--TH-VADEF---KLPTIILQTHSVSGYLGIAAYPFLRDKGYVPI 166 (460)
Q Consensus 93 ~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~~--~~-~A~~l---giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~ 166 (460)
..+...+++. +||+|++...... .. ++..+ ++|+|......... ..
T Consensus 89 ~~l~~~l~~~------------~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~----~~------------ 140 (394)
T 2jjm_A 89 SKMAEVAQRE------------NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT----VL------------ 140 (394)
T ss_dssp HHHHHHHHHH------------TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH----TT------------
T ss_pred HHHHHHHHHc------------CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc----cc------------
Confidence 1123333333 8999998754332 23 44443 59988755441110 00
Q ss_pred CCCCCCCccCCCCCCCCCCCCCcccCCCCCcHHHHHHHHhhhccCceEEecchHHhhHHHhhcCccccCCCCceeecccc
Q 012563 167 QDPQSESPVIEYPPLRVKDIPKLETRYPEYNYPLVSAMVNNIKASSGMIWNTFEELEQAALSTLPEEYSGIPVFPIGPFH 246 (460)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~pv~~vGpl~ 246 (460)
......... ....++.++.++..+....+.- ...... +.++..+..-.
T Consensus 141 -------------------------~~~~~~~~~---~~~~~~~ad~ii~~s~~~~~~~-~~~~~~---~~~~~vi~ngv 188 (394)
T 2jjm_A 141 -------------------------GSDPSLNNL---IRFGIEQSDVVTAVSHSLINET-HELVKP---NKDIQTVYNFI 188 (394)
T ss_dssp -------------------------TTCTTTHHH---HHHHHHHSSEEEESCHHHHHHH-HHHTCC---SSCEEECCCCC
T ss_pred -------------------------CCCHHHHHH---HHHHHhhCCEEEECCHHHHHHH-HHhhCC---cccEEEecCCc
Confidence 000001111 1223466778887776544321 011110 13454444222
Q ss_pred cCCCCCCCCccccccchhhhhccCCCCeEEEEEecccccCCHHHHHHHHHHHHh----CCCCEEEEECCCCCCCchhhcc
Q 012563 247 KYFPASSSSLLSQDQSSISWLDKQAPKSVIYVSFGSVAAINETEFLEIAWGLAN----SRVPFLWVVRPGLVDGVEWLEA 322 (460)
Q Consensus 247 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~----~~~~~i~~~~~~~~~~~~~~~~ 322 (460)
....- . .....++.+-+.. +++..+++..|+.... +.+..+++++.. .+.+ ++.++.... ...
T Consensus 189 ~~~~~---~-~~~~~~~~~~~~~-~~~~~~i~~~G~~~~~--Kg~~~li~a~~~l~~~~~~~-l~i~G~g~~-----~~~ 255 (394)
T 2jjm_A 189 DERVY---F-KRDMTQLKKEYGI-SESEKILIHISNFRKV--KRVQDVVQAFAKIVTEVDAK-LLLVGDGPE-----FCT 255 (394)
T ss_dssp CTTTC---C-CCCCHHHHHHTTC-C---CEEEEECCCCGG--GTHHHHHHHHHHHHHSSCCE-EEEECCCTT-----HHH
T ss_pred cHHhc---C-CcchHHHHHHcCC-CCCCeEEEEeeccccc--cCHHHHHHHHHHHHhhCCCE-EEEECCchH-----HHH
Confidence 11100 0 0011112222221 1233455567876642 233334444433 2343 344443321 011
Q ss_pred CchhHHh-hhCCCceEEeccch-HHHhccCCCccee----eccCchhhHHHHhhCCCeeecCcccchhhHHHHHHHhhce
Q 012563 323 LPKGYLE-MVDGRGYIVQWAPQ-QQVLAHPAVGGFL----THSGWNSTLESICEGVPMICQPCLADQMVNARYVSHVWRV 396 (460)
Q Consensus 323 ~~~~~~~-~~~~~~~~~~~vp~-~~lL~~~~~~~~I----~HGG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~ 396 (460)
+-+.+.+ ...+++.+..+... ..++..+++ +| .-|..+++.||+++|+|+|+.+.. .....+++. +.
T Consensus 256 l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~e~v~~~-~~ 328 (394)
T 2jjm_A 256 ILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIPEVIQHG-DT 328 (394)
T ss_dssp HHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----TSTTTCCBT-TT
T ss_pred HHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----ChHHHhhcC-Cc
Confidence 1111111 11255677776554 669999998 88 456668999999999999997653 233344452 67
Q ss_pred eEeeCCccCHHHHHHHHHHHhccch-HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHhc
Q 012563 397 GLHLEGKLEKKEIETAIRRLMVEAE-GQEMRERITCLKKNVDACLRQGGSSHQALGRLVDHILS 459 (460)
Q Consensus 397 G~~~~~~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (460)
|..++. -+.+++.++|.++++|.+ ...+.+++++.. .+.-+.++.++++++.+++
T Consensus 329 g~~~~~-~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~-------~~~~s~~~~~~~~~~~~~~ 384 (394)
T 2jjm_A 329 GYLCEV-GDTTGVADQAIQLLKDEELHRNMGERARESV-------YEQFRSEKIVSQYETIYYD 384 (394)
T ss_dssp EEEECT-TCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH-------HHHSCHHHHHHHHHHHHHH
T ss_pred eEEeCC-CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH-------HHhCCHHHHHHHHHHHHHH
Confidence 777764 589999999999998832 122333333332 2345677777877777765
No 29
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.34 E-value=7.5e-12 Score=122.40 Aligned_cols=159 Identities=14% Similarity=0.140 Sum_probs=94.8
Q ss_pred CCCeEEEEEecccccCCHHHHHHHHHHHHhC-----CCCEEEEECCCCCCCchhhccCchhHHhh--hCCCceEEeccc-
Q 012563 271 APKSVIYVSFGSVAAINETEFLEIAWGLANS-----RVPFLWVVRPGLVDGVEWLEALPKGYLEM--VDGRGYIVQWAP- 342 (460)
Q Consensus 271 ~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~vp- 342 (460)
+++++++++.+-..... +.+..+++|+..+ +.++++.++.+. + +-+.+.+. ..+++++.++++
T Consensus 228 ~~~~~vlv~~hR~~~~~-~~~~~ll~A~~~l~~~~~~~~~v~~~g~~~----~----~~~~l~~~~~~~~~v~~~~~lg~ 298 (396)
T 3dzc_A 228 ASKKLILVTGHRRESFG-GGFERICQALITTAEQHPECQILYPVHLNP----N----VREPVNKLLKGVSNIVLIEPQQY 298 (396)
T ss_dssp TTSEEEEEECSCBCCCT-THHHHHHHHHHHHHHHCTTEEEEEECCBCH----H----HHHHHHHHTTTCTTEEEECCCCH
T ss_pred CCCCEEEEEECCcccch-hHHHHHHHHHHHHHHhCCCceEEEEeCCCh----H----HHHHHHHHHcCCCCEEEeCCCCH
Confidence 35678887763212211 1245566666542 445555444321 0 11222221 235778877765
Q ss_pred --hHHHhccCCCcceeeccCchhhHHHHhhCCCeeecCcccchhhHHHHHHHhhceeEeeCCccCHHHHHHHHHHHhccc
Q 012563 343 --QQQVLAHPAVGGFLTHSGWNSTLESICEGVPMICQPCLADQMVNARYVSHVWRVGLHLEGKLEKKEIETAIRRLMVEA 420 (460)
Q Consensus 343 --~~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~l~~~i~~ll~~~ 420 (460)
...+++.+++ +|+-.| |.+.||+++|+|+|+..-..+++ .+.+. |.++.+.. ++++|.+++.++++|
T Consensus 299 ~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~----e~v~~-G~~~lv~~--d~~~l~~ai~~ll~d- 367 (396)
T 3dzc_A 299 LPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERP----EAVAA-GTVKLVGT--NQQQICDALSLLLTD- 367 (396)
T ss_dssp HHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCH----HHHHH-TSEEECTT--CHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcch----HHHHc-CceEEcCC--CHHHHHHHHHHHHcC-
Confidence 3568899998 999988 66689999999999975555543 23453 88766653 799999999999998
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHhc
Q 012563 421 EGQEMRERITCLKKNVDACLRQGGSSHQALGRLVDHILS 459 (460)
Q Consensus 421 ~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (460)
+..++ +|++..+ .-+...+.+++++.|+|
T Consensus 368 --~~~~~---~m~~~~~-----~~~~~~aa~ri~~~l~~ 396 (396)
T 3dzc_A 368 --PQAYQ---AMSQAHN-----PYGDGKACQRIADILAK 396 (396)
T ss_dssp --HHHHH---HHHTSCC-----TTCCSCHHHHHHHHHHC
T ss_pred --HHHHH---HHhhccC-----CCcCChHHHHHHHHHhC
Confidence 44443 2332221 12334455566666553
No 30
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.32 E-value=2.2e-10 Score=112.17 Aligned_cols=113 Identities=7% Similarity=0.096 Sum_probs=79.7
Q ss_pred CCCceEEeccchH---HHhccCCCcceeec----cCc-hhhHHHHhhCCCeeecCcccchhhHHHHHHHhhceeEeeCCc
Q 012563 332 DGRGYIVQWAPQQ---QVLAHPAVGGFLTH----SGW-NSTLESICEGVPMICQPCLADQMVNARYVSHVWRVGLHLEGK 403 (460)
Q Consensus 332 ~~~~~~~~~vp~~---~lL~~~~~~~~I~H----GG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~~~~~ 403 (460)
.+++.+..++++. .++..+++ +|.- .|. +++.||+++|+|+|+.+. ......+.+. +.|..++.
T Consensus 262 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~- 333 (406)
T 2gek_A 262 AGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLADG-DAGRLVPV- 333 (406)
T ss_dssp GGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTTT-TSSEECCT-
T ss_pred cCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcCC-CceEEeCC-
Confidence 4677888999874 68899998 7743 344 589999999999999654 5666777773 77887764
Q ss_pred cCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHhc
Q 012563 404 LEKKEIETAIRRLMVEAEGQEMRERITCLKKNVDACLRQGGSSHQALGRLVDHILS 459 (460)
Q Consensus 404 ~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (460)
-+.+++.++|.++++| ...++ ++++..++... .-+.++.++++.+.+++
T Consensus 334 ~d~~~l~~~i~~l~~~---~~~~~---~~~~~~~~~~~-~~s~~~~~~~~~~~~~~ 382 (406)
T 2gek_A 334 DDADGMAAALIGILED---DQLRA---GYVARASERVH-RYDWSVVSAQIMRVYET 382 (406)
T ss_dssp TCHHHHHHHHHHHHHC---HHHHH---HHHHHHHHHGG-GGBHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcC---HHHHH---HHHHHHHHHHH-hCCHHHHHHHHHHHHHH
Confidence 5899999999999988 33222 23333333333 44667777777766654
No 31
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.32 E-value=6.1e-11 Score=115.17 Aligned_cols=128 Identities=10% Similarity=0.119 Sum_probs=82.7
Q ss_pred CCeEEEEEecccccCCHHHHHHHHHHHHhC-----CCCEEEEECCCCCCCchhhccCchhHHhhh--CCCceEEeccch-
Q 012563 272 PKSVIYVSFGSVAAINETEFLEIAWGLANS-----RVPFLWVVRPGLVDGVEWLEALPKGYLEMV--DGRGYIVQWAPQ- 343 (460)
Q Consensus 272 ~~~~v~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~vp~- 343 (460)
++++|+++.|...... .+..+++|+..+ +..+++..+.+. + +-+.+.+.. .+++++.+++++
T Consensus 197 ~~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~----~----~~~~l~~~~~~~~~v~~~g~~g~~ 266 (376)
T 1v4v_A 197 EGPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNP----V----VREAVFPVLKGVRNFVLLDPLEYG 266 (376)
T ss_dssp SSCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCH----H----HHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCH----H----HHHHHHHHhccCCCEEEECCCCHH
Confidence 4567777777553321 244455555432 344444434321 0 112222211 257788855554
Q ss_pred --HHHhccCCCcceeeccCchhhHHHHhhCCCeeecCcccchhhHHHHHHHhhceeEeeCCccCHHHHHHHHHHHhcc
Q 012563 344 --QQVLAHPAVGGFLTHSGWNSTLESICEGVPMICQPCLADQMVNARYVSHVWRVGLHLEGKLEKKEIETAIRRLMVE 419 (460)
Q Consensus 344 --~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~l~~~i~~ll~~ 419 (460)
..++..+++ ||+.+| |.+.||+++|+|+|+.+..+++.. +.+. |.|+.++ .++++|.++|.++++|
T Consensus 267 ~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~~-g~g~lv~--~d~~~la~~i~~ll~d 334 (376)
T 1v4v_A 267 SMAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLKA-GILKLAG--TDPEGVYRVVKGLLEN 334 (376)
T ss_dssp HHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHHH-TSEEECC--SCHHHHHHHHHHHHTC
T ss_pred HHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhcC-CceEECC--CCHHHHHHHHHHHHhC
Confidence 579999999 999884 456699999999999887666655 2454 8888775 3999999999999998
No 32
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.32 E-value=3.1e-11 Score=117.57 Aligned_cols=161 Identities=15% Similarity=0.190 Sum_probs=96.3
Q ss_pred CCeEEEEEecccccCCHHHHHHHHHHHHhC-----CCCEEEEECCCCCCCchhhccCchhHHhhh--CCCceEEeccch-
Q 012563 272 PKSVIYVSFGSVAAINETEFLEIAWGLANS-----RVPFLWVVRPGLVDGVEWLEALPKGYLEMV--DGRGYIVQWAPQ- 343 (460)
Q Consensus 272 ~~~~v~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~vp~- 343 (460)
++++++++.|...... +.+..+++++... +.++++..+.+. + ..+.+.+.. .+++.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~~----~----~~~~l~~~~~~~~~v~~~g~~~~~ 274 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLNP----N----VREPVNRILGHVKNVILIDPQEYL 274 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBCH----H----HHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCCH----H----HHHHHHHHhhcCCCEEEeCCCCHH
Confidence 4677888888765321 2344455555432 344444333221 0 112222211 257788666654
Q ss_pred --HHHhccCCCcceeeccCchhhHHHHhhCCCeeecCcccchhhHHHHHHHhhceeEeeCCccCHHHHHHHHHHHhccch
Q 012563 344 --QQVLAHPAVGGFLTHSGWNSTLESICEGVPMICQPCLADQMVNARYVSHVWRVGLHLEGKLEKKEIETAIRRLMVEAE 421 (460)
Q Consensus 344 --~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~l~~~i~~ll~~~~ 421 (460)
..++..+++ ||+.+| +++.||+++|+|+|+.+..++.. .+.+. |.|+.++. ++++|.++|.++++|
T Consensus 275 ~~~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~----e~v~~-g~g~lv~~--d~~~la~~i~~ll~d-- 342 (384)
T 1vgv_A 275 PFVWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERP----EAVTA-GTVRLVGT--DKQRIVEEVTRLLKD-- 342 (384)
T ss_dssp HHHHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCH----HHHHH-TSEEEECS--SHHHHHHHHHHHHHC--
T ss_pred HHHHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcc----hhhhC-CceEEeCC--CHHHHHHHHHHHHhC--
Confidence 568999999 999986 45889999999999998744432 23454 88988874 899999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHh
Q 012563 422 GQEMRERITCLKKNVDACLRQGGSSHQALGRLVDHIL 458 (460)
Q Consensus 422 ~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (460)
++.++ +|++..++ ..++.+.++.++.+.+.++
T Consensus 343 -~~~~~---~~~~~~~~-~~~~~~~~~i~~~~~~~~~ 374 (384)
T 1vgv_A 343 -ENEYQ---AMSRAHNP-YGDGQACSRILEALKNNRI 374 (384)
T ss_dssp -HHHHH---HHHSSCCT-TCCSCHHHHHHHHHHHTCC
T ss_pred -hHHHh---hhhhccCC-CcCCCHHHHHHHHHHHHHH
Confidence 43332 22222221 1134445555555555443
No 33
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.30 E-value=9.4e-11 Score=113.51 Aligned_cols=147 Identities=16% Similarity=0.205 Sum_probs=92.9
Q ss_pred CeEEEEEecccccCCHHHHHHHHHHHHhCCC----C-EEEEECCCCCCCchhhccCchhHHhhhCCCceEEeccch-HHH
Q 012563 273 KSVIYVSFGSVAAINETEFLEIAWGLANSRV----P-FLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQ-QQV 346 (460)
Q Consensus 273 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~----~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~-~~l 346 (460)
+..+++..|+... .+.+..+++++..... . .++.++.+.. +.+..+.... ...+++.+..+... ..+
T Consensus 195 ~~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~---~~~~~~~~~~--~~~~~v~~~g~~~~~~~~ 267 (374)
T 2iw1_A 195 QQNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQDKP---RKFEALAEKL--GVRSNVHFFSGRNDVSEL 267 (374)
T ss_dssp TCEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSSCC---HHHHHHHHHH--TCGGGEEEESCCSCHHHH
T ss_pred CCeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCCCH---HHHHHHHHHc--CCCCcEEECCCcccHHHH
Confidence 4456667787654 3445666777776532 2 2444554321 1111111110 11356788877654 668
Q ss_pred hccCCCcceee----ccCchhhHHHHhhCCCeeecCcccchhhHHHHHHHhhceeEeeCCccCHHHHHHHHHHHhccch-
Q 012563 347 LAHPAVGGFLT----HSGWNSTLESICEGVPMICQPCLADQMVNARYVSHVWRVGLHLEGKLEKKEIETAIRRLMVEAE- 421 (460)
Q Consensus 347 L~~~~~~~~I~----HGG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~l~~~i~~ll~~~~- 421 (460)
+..+++ +|. -|..+++.||+++|+|+|+... ..+...+++. +.|..++..-+.+++.++|.++++|.+
T Consensus 268 ~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~~~~~~~~l~~~i~~l~~~~~~ 340 (374)
T 2iw1_A 268 MAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIAEPFSQEQLNEVLRKALTQSPL 340 (374)
T ss_dssp HHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEECSSCCHHHHHHHHHHHHHCHHH
T ss_pred HHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeCCCCCHHHHHHHHHHHHcChHH
Confidence 999998 776 4567899999999999999654 4566778885 899988633689999999999998832
Q ss_pred HHHHHHHHHHHH
Q 012563 422 GQEMRERITCLK 433 (460)
Q Consensus 422 ~~~~~~~a~~l~ 433 (460)
...+.+++++..
T Consensus 341 ~~~~~~~~~~~~ 352 (374)
T 2iw1_A 341 RMAWAENARHYA 352 (374)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 233344444433
No 34
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.30 E-value=8.2e-10 Score=111.51 Aligned_cols=113 Identities=14% Similarity=0.150 Sum_probs=76.7
Q ss_pred CCCceEEeccchH---HHhccC----CCcceeecc---C-chhhHHHHhhCCCeeecCcccchhhHHHHHHHhhceeEee
Q 012563 332 DGRGYIVQWAPQQ---QVLAHP----AVGGFLTHS---G-WNSTLESICEGVPMICQPCLADQMVNARYVSHVWRVGLHL 400 (460)
Q Consensus 332 ~~~~~~~~~vp~~---~lL~~~----~~~~~I~HG---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~~ 400 (460)
.+++.+..++|+. .++..+ ++ +|.-. | -.++.||+++|+|+|+.. -......+.+. ..|..+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~----~~g~~e~v~~~-~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTR----NGGPAEILDGG-KYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEES----SBHHHHHTGGG-TSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEec----CCCHHHHhcCC-ceEEEe
Confidence 4678899999764 478888 88 77432 3 468999999999999954 34556666663 578888
Q ss_pred CCccCHHHHHHHHHHHhccch-HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHhc
Q 012563 401 EGKLEKKEIETAIRRLMVEAE-GQEMRERITCLKKNVDACLRQGGSSHQALGRLVDHILS 459 (460)
Q Consensus 401 ~~~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (460)
+. -+.+++.++|.++++|.+ ...+.+++++..+ +.-+.++.++++.+.+++
T Consensus 407 ~~-~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~-------~~fs~~~~~~~~~~~y~~ 458 (499)
T 2r60_A 407 DP-EDPEDIARGLLKAFESEETWSAYQEKGKQRVE-------ERYTWQETARGYLEVIQE 458 (499)
T ss_dssp CT-TCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHH-------HHSBHHHHHHHHHHHHHH
T ss_pred CC-CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH-------HhCCHHHHHHHHHHHHHH
Confidence 74 689999999999999832 1223333333222 334566666666665543
No 35
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.29 E-value=3.3e-11 Score=118.00 Aligned_cols=161 Identities=10% Similarity=0.127 Sum_probs=96.4
Q ss_pred CCCeEEEEEecccccCCHHHHHHHHHHHHh-----CCCCEEEEECCCCCCCchhhccCchhHHhh--hCCCceEEeccch
Q 012563 271 APKSVIYVSFGSVAAINETEFLEIAWGLAN-----SRVPFLWVVRPGLVDGVEWLEALPKGYLEM--VDGRGYIVQWAPQ 343 (460)
Q Consensus 271 ~~~~~v~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~vp~ 343 (460)
+++++++++.|...... +.+..+++++.. .+.++++..+.+. + +-+.+.+. ..+++++.+++++
T Consensus 222 ~~~~~vlv~~~r~~~~~-~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~----~----~~~~l~~~~~~~~~v~l~~~l~~ 292 (403)
T 3ot5_A 222 GDNRLILMTAHRRENLG-EPMQGMFEAVREIVESREDTELVYPMHLNP----A----VREKAMAILGGHERIHLIEPLDA 292 (403)
T ss_dssp TTCEEEEECCCCHHHHT-THHHHHHHHHHHHHHHCTTEEEEEECCSCH----H----HHHHHHHHHTTCTTEEEECCCCH
T ss_pred cCCCEEEEEeCcccccC-cHHHHHHHHHHHHHHhCCCceEEEecCCCH----H----HHHHHHHHhCCCCCEEEeCCCCH
Confidence 35678888766422211 123445555543 2345555544321 0 11122211 2257788888863
Q ss_pred ---HHHhccCCCcceeeccCchhhHHHHhhCCCeeecCcccchhhHHHHHHHhhceeEeeCCccCHHHHHHHHHHHhccc
Q 012563 344 ---QQVLAHPAVGGFLTHSGWNSTLESICEGVPMICQPCLADQMVNARYVSHVWRVGLHLEGKLEKKEIETAIRRLMVEA 420 (460)
Q Consensus 344 ---~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~l~~~i~~ll~~~ 420 (460)
..+++.+++ +|+-.| |.+.||+++|+|+|++|..++++. +.+. |.|+.+. .++++|.+++.++++|
T Consensus 293 ~~~~~l~~~ad~--vv~~SG-g~~~EA~a~g~PvV~~~~~~~~~e----~v~~-g~~~lv~--~d~~~l~~ai~~ll~~- 361 (403)
T 3ot5_A 293 IDFHNFLRKSYL--VFTDSG-GVQEEAPGMGVPVLVLRDTTERPE----GIEA-GTLKLIG--TNKENLIKEALDLLDN- 361 (403)
T ss_dssp HHHHHHHHHEEE--EEECCH-HHHHHGGGTTCCEEECCSSCSCHH----HHHH-TSEEECC--SCHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHhcCE--EEECCc-cHHHHHHHhCCCEEEecCCCcchh----heeC-CcEEEcC--CCHHHHHHHHHHHHcC-
Confidence 558889998 998875 333799999999999976666554 2354 8887776 3899999999999988
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 012563 421 EGQEMRERITCLKKNVDACLRQGGSSHQALGRLVDHI 457 (460)
Q Consensus 421 ~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 457 (460)
+..+++. ++..+ ....++++++.++.+.+.+
T Consensus 362 --~~~~~~m---~~~~~-~~g~~~aa~rI~~~l~~~l 392 (403)
T 3ot5_A 362 --KESHDKM---AQAAN-PYGDGFAANRILAAIKSHF 392 (403)
T ss_dssp --HHHHHHH---HHSCC-TTCCSCHHHHHHHHHHHHH
T ss_pred --HHHHHHH---HhhcC-cccCCcHHHHHHHHHHHHh
Confidence 4444332 22211 1235555666665555443
No 36
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.22 E-value=1.4e-09 Score=107.05 Aligned_cols=112 Identities=16% Similarity=0.109 Sum_probs=78.6
Q ss_pred CCCceEEeccc---h---HHHhccCCCcceeecc----CchhhHHHHhhCCCeeecCcccchhhHHHHHHHhhceeEeeC
Q 012563 332 DGRGYIVQWAP---Q---QQVLAHPAVGGFLTHS----GWNSTLESICEGVPMICQPCLADQMVNARYVSHVWRVGLHLE 401 (460)
Q Consensus 332 ~~~~~~~~~vp---~---~~lL~~~~~~~~I~HG----G~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~~~ 401 (460)
.+++.+..|++ + ..++..+++ +|.-. ..+++.||+++|+|+|+.+. ..+...+++. +.|..++
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEEC
Confidence 36788888776 2 457888888 77654 45789999999999999654 4566667663 6787775
Q ss_pred CccCHHHHHHHHHHHhccch-HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHhcC
Q 012563 402 GKLEKKEIETAIRRLMVEAE-GQEMRERITCLKKNVDACLRQGGSSHQALGRLVDHILSF 460 (460)
Q Consensus 402 ~~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 460 (460)
+.+++.++|.++++|.+ ...+.+++++.. .+.-+.++.++++++.++++
T Consensus 365 ---d~~~la~~i~~ll~~~~~~~~~~~~a~~~~-------~~~fs~~~~~~~~~~~~~~l 414 (416)
T 2x6q_A 365 ---DANEAVEVVLYLLKHPEVSKEMGAKAKERV-------RKNFIITKHMERYLDILNSL 414 (416)
T ss_dssp ---SHHHHHHHHHHHHHCHHHHHHHHHHHHHHH-------HHHTBHHHHHHHHHHHHHTC
T ss_pred ---CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-------HHHcCHHHHHHHHHHHHHHh
Confidence 89999999999998832 122333333322 23456777888888877653
No 37
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.22 E-value=7.3e-10 Score=106.00 Aligned_cols=124 Identities=15% Similarity=0.102 Sum_probs=83.3
Q ss_pred EEEecccccCCHHHHHHHHHHHHhCCCCEEEEECCCCCCCchhhccCchhHHhhhCCCceEEeccchH---HHhccCCCc
Q 012563 277 YVSFGSVAAINETEFLEIAWGLANSRVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQ---QVLAHPAVG 353 (460)
Q Consensus 277 ~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~---~lL~~~~~~ 353 (460)
++..|+... .+.+..+++++...+.+++++ |... ..+.+ ..+.++..+++.+..|+++. .++..+++
T Consensus 165 i~~vG~~~~--~Kg~~~li~a~~~~~~~l~i~-G~g~--~~~~l----~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv- 234 (342)
T 2iuy_A 165 LLFMGRVSP--HKGALEAAAFAHACGRRLVLA-GPAW--EPEYF----DEITRRYGSTVEPIGEVGGERRLDLLASAHA- 234 (342)
T ss_dssp EEEESCCCG--GGTHHHHHHHHHHHTCCEEEE-SCCC--CHHHH----HHHHHHHTTTEEECCCCCHHHHHHHHHHCSE-
T ss_pred EEEEecccc--ccCHHHHHHHHHhcCcEEEEE-eCcc--cHHHH----HHHHHHhCCCEEEeccCCHHHHHHHHHhCCE-
Confidence 445677653 344666777777667776554 4332 10111 12223334788999999975 68889998
Q ss_pred ceee--c-----------cC-chhhHHHHhhCCCeeecCcccchhhHHHHHHH--hhceeEeeCCccCHHHHHHHHHHHh
Q 012563 354 GFLT--H-----------SG-WNSTLESICEGVPMICQPCLADQMVNARYVSH--VWRVGLHLEGKLEKKEIETAIRRLM 417 (460)
Q Consensus 354 ~~I~--H-----------GG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~--~lG~G~~~~~~~~~~~l~~~i~~ll 417 (460)
+|. . -| .+++.||+++|+|+|+... ..+...+++ . +.|..++ . +.+++.++|.+++
T Consensus 235 -~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~-~~g~~~~-~-d~~~l~~~i~~l~ 306 (342)
T 2iuy_A 235 -VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGE-VVGYGTD-F-APDEARRTLAGLP 306 (342)
T ss_dssp -EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEE-ECCSSSC-C-CHHHHHHHHHTSC
T ss_pred -EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCC-CceEEcC-C-CHHHHHHHHHHHH
Confidence 763 2 33 4689999999999999654 446666666 4 5676666 4 9999999999998
Q ss_pred c
Q 012563 418 V 418 (460)
Q Consensus 418 ~ 418 (460)
+
T Consensus 307 ~ 307 (342)
T 2iuy_A 307 A 307 (342)
T ss_dssp C
T ss_pred H
Confidence 6
No 38
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.21 E-value=9.7e-10 Score=106.44 Aligned_cols=163 Identities=12% Similarity=0.154 Sum_probs=95.0
Q ss_pred CCeEEEEEecccccCCHHHHHHHHHHHHhC---CCCEEEEECCCCCCCchhhccCchhHHhhhC--CCceEEeccch---
Q 012563 272 PKSVIYVSFGSVAAINETEFLEIAWGLANS---RVPFLWVVRPGLVDGVEWLEALPKGYLEMVD--GRGYIVQWAPQ--- 343 (460)
Q Consensus 272 ~~~~v~vs~GS~~~~~~~~~~~~~~al~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~vp~--- 343 (460)
++++++++.|...... +.+..+++|+... ..++.+.++.+.. ..+-+.+.+... +++.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~~~g~~------~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 276 (375)
T 3beo_A 204 NNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVYPVHMN------PVVRETANDILGDYGRIHLIEPLDVIDF 276 (375)
T ss_dssp TSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEEECCSC------HHHHHHHHHHHTTCTTEEEECCCCHHHH
T ss_pred CCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEEeCCCC------HHHHHHHHHHhhccCCEEEeCCCCHHHH
Confidence 4567777888754321 3455566666532 1122233332210 001122222222 67788777665
Q ss_pred HHHhccCCCcceeeccCchhhHHHHhhCCCeeecCcccchhhHHHHHHHhhceeEeeCCccCHHHHHHHHHHHhccchHH
Q 012563 344 QQVLAHPAVGGFLTHSGWNSTLESICEGVPMICQPCLADQMVNARYVSHVWRVGLHLEGKLEKKEIETAIRRLMVEAEGQ 423 (460)
Q Consensus 344 ~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~l~~~i~~ll~~~~~~ 423 (460)
..++..+++ ||+.+| +++.||+++|+|+|+....+.. . .+.+. |.|..++. +.++|.++|.++++| +
T Consensus 277 ~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~---~-e~v~~-g~g~~v~~--d~~~la~~i~~ll~~---~ 343 (375)
T 3beo_A 277 HNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTER---P-EGIEA-GTLKLAGT--DEETIFSLADELLSD---K 343 (375)
T ss_dssp HHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSC---H-HHHHT-TSEEECCS--CHHHHHHHHHHHHHC---H
T ss_pred HHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCC---c-eeecC-CceEEcCC--CHHHHHHHHHHHHhC---h
Confidence 458889998 999874 5588999999999998543332 2 23453 88888763 899999999999998 4
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHh
Q 012563 424 EMRERITCLKKNVDACLRQGGSSHQALGRLVDHIL 458 (460)
Q Consensus 424 ~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (460)
+.+++ +++..++ ..++.+.++.++.+.+.++
T Consensus 344 ~~~~~---~~~~~~~-~~~~~~~~~i~~~~~~~~~ 374 (375)
T 3beo_A 344 EAHDK---MSKASNP-YGDGRASERIVEAILKHFN 374 (375)
T ss_dssp HHHHH---HCCCCCT-TCCSCHHHHHHHHHHHHTT
T ss_pred HhHhh---hhhcCCC-CCCCcHHHHHHHHHHHHhh
Confidence 43332 2222221 1134555565666555543
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.02 E-value=5.3e-10 Score=108.55 Aligned_cols=339 Identities=11% Similarity=0.061 Sum_probs=176.8
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCCC-CCCC--CCCceEEeCCC-CCCCCCCCCHHHHHHHHHHh
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNSP-NSCN--YPHFDFHSISD-GLTDPSAEDSTTILITLNAK 90 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~-~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 90 (460)
++++++. |+.-.+.-+.+|.++|.++ +++.++.|..... ...+ ..++.+ +-|+ .+... ..+.........
T Consensus 10 ~~~~~v~-GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~~~~~i-~~~~~~l~~~-~~~~~~~~~~~~-- 83 (385)
T 4hwg_A 10 LKVMTIV-GTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFFDDMGI-RKPDYFLEVA-ADNTAKSIGLVI-- 83 (385)
T ss_dssp CEEEEEE-CSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHHC-CCC-CCCSEECCCC-CCCSHHHHHHHH--
T ss_pred hheeEEE-EcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHHhhCCC-CCCceecCCC-CCCHHHHHHHHH--
Confidence 4666665 8888889999999999887 9988888853321 1110 011221 1111 11111 112222222221
Q ss_pred cchhHHHHHHHHhhcCCCCCCCCCCceEEEEcC--cchHHH-HHhhcCCCeEEEeCccHHHHHHHhhcccccccCCCCCC
Q 012563 91 CMVPFRNCLAKLVSNTNNNNAQEDSVACLITDF--LWQFTH-VADEFKLPTIILQTHSVSGYLGIAAYPFLRDKGYVPIQ 167 (460)
Q Consensus 91 ~~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~--~~~~~~-~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 167 (460)
..+.+.+++. +||+|++-. ...++. +|.++|||++.+.... .
T Consensus 84 --~~l~~~l~~~------------kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eagl---------------r------ 128 (385)
T 4hwg_A 84 --EKVDEVLEKE------------KPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAGN---------------R------ 128 (385)
T ss_dssp --HHHHHHHHHH------------CCSEEEEESCSGGGGGHHHHHHTTCCEEEESCCC---------------C------
T ss_pred --HHHHHHHHhc------------CCcEEEEECCchHHHHHHHHHHhCCCEEEEeCCC---------------c------
Confidence 1244455555 899998732 334447 9999999976543220 0
Q ss_pred CCCCCCccCCCCCCCCCCCCCcccCCCCCcHH-HHHHHHhhhccCceEEecchHHhhHHHhhcCccccCC-CCceeec-c
Q 012563 168 DPQSESPVIEYPPLRVKDIPKLETRYPEYNYP-LVSAMVNNIKASSGMIWNTFEELEQAALSTLPEEYSG-IPVFPIG-P 244 (460)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~-~pv~~vG-p 244 (460)
.....+.. ....+.. .-++.++..+...-+.- . +.. .+ ..++.+| |
T Consensus 129 ------------------------s~~~~~pee~nR~~~~--~~a~~~~~~te~~~~~l--~--~~G-~~~~~I~vtGnp 177 (385)
T 4hwg_A 129 ------------------------CFDQRVPEEINRKIID--HISDVNITLTEHARRYL--I--AEG-LPAELTFKSGSH 177 (385)
T ss_dssp ------------------------CSCTTSTHHHHHHHHH--HHCSEEEESSHHHHHHH--H--HTT-CCGGGEEECCCS
T ss_pred ------------------------cccccCcHHHHHHHHH--hhhceeecCCHHHHHHH--H--HcC-CCcCcEEEECCc
Confidence 00000111 1111112 22445555554432211 0 111 11 2388888 4
Q ss_pred cccCCCCCCCCccccccchhhhhccCCCCeEEEEEecccccCC-HHHHHHHHHHHHhC----CCCEEEEECCCCCCCchh
Q 012563 245 FHKYFPASSSSLLSQDQSSISWLDKQAPKSVIYVSFGSVAAIN-ETEFLEIAWGLANS----RVPFLWVVRPGLVDGVEW 319 (460)
Q Consensus 245 l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~-~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~ 319 (460)
....... ........++.+.++-. +++.++++.|...... .+.+..+++++... +.++++...+..
T Consensus 178 ~~D~~~~--~~~~~~~~~~~~~lgl~-~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~~------ 248 (385)
T 4hwg_A 178 MPEVLDR--FMPKILKSDILDKLSLT-PKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPRT------ 248 (385)
T ss_dssp HHHHHHH--HHHHHHHCCHHHHTTCC-TTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHHH------
T ss_pred hHHHHHH--hhhhcchhHHHHHcCCC-cCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChHH------
Confidence 3321100 00001112234444432 3578888888754322 24556666776543 456666553211
Q ss_pred hccCchhHHhh-----hCCCceEEeccc---hHHHhccCCCcceeeccCchhhHHHHhhCCCeeecCcccchhhHHHHHH
Q 012563 320 LEALPKGYLEM-----VDGRGYIVQWAP---QQQVLAHPAVGGFLTHSGWNSTLESICEGVPMICQPCLADQMVNARYVS 391 (460)
Q Consensus 320 ~~~~~~~~~~~-----~~~~~~~~~~vp---~~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~ 391 (460)
.+.+.+. ..+++++.+.++ ...+++.+++ +|+-.|. .+.||.+.|+|+|.++...+.+. ..
T Consensus 249 ----~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v 317 (385)
T 4hwg_A 249 ----KKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE----GM 317 (385)
T ss_dssp ----HHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HH
T ss_pred ----HHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh----hh
Confidence 1111111 124667765544 4568999999 9999875 46999999999999987654222 24
Q ss_pred HhhceeEeeCCccCHHHHHHHHHHHhccch-HHHHHHHHHHHHHHHHHHH-hcCCChHHHHHHHHHH
Q 012563 392 HVWRVGLHLEGKLEKKEIETAIRRLMVEAE-GQEMRERITCLKKNVDACL-RQGGSSHQALGRLVDH 456 (460)
Q Consensus 392 ~~lG~G~~~~~~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~l~~~~~~~~-~~~g~~~~~~~~~~~~ 456 (460)
+. |.++.+. .+++.|.+++.++++|++ .+.+++++.. . .+|+++++.++.+.+.
T Consensus 318 ~~-G~~~lv~--~d~~~i~~ai~~ll~d~~~~~~m~~~~~~--------~~g~g~aa~rI~~~l~~~ 373 (385)
T 4hwg_A 318 DA-GTLIMSG--FKAERVLQAVKTITEEHDNNKRTQGLVPD--------YNEAGLVSKKILRIVLSY 373 (385)
T ss_dssp HH-TCCEECC--SSHHHHHHHHHHHHTTCBTTBCCSCCCHH--------HHTCCCHHHHHHHHHHHH
T ss_pred hc-CceEEcC--CCHHHHHHHHHHHHhChHHHHHhhccCCC--------CCCCChHHHHHHHHHHHH
Confidence 53 8777664 489999999999998742 1112222221 2 2566666666655543
No 40
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.91 E-value=1.5e-07 Score=99.17 Aligned_cols=112 Identities=11% Similarity=0.107 Sum_probs=72.0
Q ss_pred CCceEEe----ccchHHHhc----cCCCcceeec----cCchhhHHHHhhCCCeeecCcccchhhHHHHHHHhhceeEee
Q 012563 333 GRGYIVQ----WAPQQQVLA----HPAVGGFLTH----SGWNSTLESICEGVPMICQPCLADQMVNARYVSHVWRVGLHL 400 (460)
Q Consensus 333 ~~~~~~~----~vp~~~lL~----~~~~~~~I~H----GG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~~ 400 (460)
+++.+.. ++++.++.. .+++ ||.- |--.++.||+++|+|+|+. |-......+.+. +.|..+
T Consensus 640 ~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg-~~Gllv 712 (816)
T 3s28_A 640 GQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHG-KSGFHI 712 (816)
T ss_dssp BBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBT-TTBEEE
T ss_pred CcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccC-CcEEEe
Confidence 6677776 445555544 4566 7743 3346999999999999994 555566666663 678888
Q ss_pred CCccCHHHHHHHHHHHh----ccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHh
Q 012563 401 EGKLEKKEIETAIRRLM----VEAEGQEMRERITCLKKNVDACLRQGGSSHQALGRLVDHIL 458 (460)
Q Consensus 401 ~~~~~~~~l~~~i~~ll----~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (460)
+. -+.++++++|.+++ +|. .. .+++++..++.+.+.-+-+..++++++..+
T Consensus 713 ~p-~D~e~LA~aI~~lL~~Ll~d~---~~---~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~ 767 (816)
T 3s28_A 713 DP-YHGDQAADTLADFFTKCKEDP---SH---WDEISKGGLQRIEEKYTWQIYSQRLLTLTG 767 (816)
T ss_dssp CT-TSHHHHHHHHHHHHHHHHHCT---HH---HHHHHHHHHHHHHHSCCHHHHHHHHHHHHH
T ss_pred CC-CCHHHHHHHHHHHHHHhccCH---HH---HHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 74 68899999997776 662 22 222333333333345566677777666544
No 41
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.89 E-value=2.1e-07 Score=91.25 Aligned_cols=110 Identities=14% Similarity=0.097 Sum_probs=73.1
Q ss_pred ceEEeccchH---HHhccCCCcceeec----cCchhhHHHHhhCCCeeecCcccchhhHHHHHHHhhce-----------
Q 012563 335 GYIVQWAPQQ---QVLAHPAVGGFLTH----SGWNSTLESICEGVPMICQPCLADQMVNARYVSHVWRV----------- 396 (460)
Q Consensus 335 ~~~~~~vp~~---~lL~~~~~~~~I~H----GG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~----------- 396 (460)
+.+..|+|+. .++..+++ +|.- |...++.||+++|+|+|+.. -......+.+. ..
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~----~~g~~e~v~~~-~~~~i~~~~~~~~ 328 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISA----VGGADDYFSGD-CVYKIKPSAWISV 328 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEEC----CHHHHHHSCTT-TSEEECCCEEEEC
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcC----CCChHHHHccC-ccccccccccccc
Confidence 4556889854 47888888 7742 33468999999999999944 34444555442 22
Q ss_pred ----eE--eeCCccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHhc
Q 012563 397 ----GL--HLEGKLEKKEIETAIRRLMVEAEGQEMRERITCLKKNVDACLRQGGSSHQALGRLVDHILS 459 (460)
Q Consensus 397 ----G~--~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (460)
|. .+. .-+.+++.++| ++++| .+.+ +++++..++.+.+.-+.++.++++.+.+++
T Consensus 329 ~~~~G~~gl~~-~~d~~~la~~i-~l~~~---~~~~---~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 389 (413)
T 3oy2_A 329 DDRDGIGGIEG-IIDVDDLVEAF-TFFKD---EKNR---KEYGKRVQDFVKTKPTWDDISSDIIDFFNS 389 (413)
T ss_dssp TTTCSSCCEEE-ECCHHHHHHHH-HHTTS---HHHH---HHHHHHHHHHHTTSCCHHHHHHHHHHHHHH
T ss_pred ccccCcceeeC-CCCHHHHHHHH-HHhcC---HHHH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 54 444 25999999999 99998 3332 334444444334566788888888777664
No 42
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.75 E-value=4.3e-07 Score=91.04 Aligned_cols=161 Identities=11% Similarity=0.022 Sum_probs=93.4
Q ss_pred EEEEEecccccCCHHHHHHHHHHHH---hCCCCEEEEECCCCCCCchhhccCchhHHhhhCCCce-EEeccch--HHHhc
Q 012563 275 VIYVSFGSVAAINETEFLEIAWGLA---NSRVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGY-IVQWAPQ--QQVLA 348 (460)
Q Consensus 275 ~v~vs~GS~~~~~~~~~~~~~~al~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~vp~--~~lL~ 348 (460)
.+++..|..... +-+..+++|+. +.+.+++++-.+.. + ....-....++..+++. +..+... ..++.
T Consensus 292 ~~i~~vGrl~~~--Kg~~~li~a~~~l~~~~~~l~ivG~g~~----~-~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~ 364 (485)
T 1rzu_A 292 PLFCVISRLTWQ--KGIDLMAEAVDEIVSLGGRLVVLGAGDV----A-LEGALLAAASRHHGRVGVAIGYNEPLSHLMQA 364 (485)
T ss_dssp CEEEEESCBSTT--TTHHHHHTTHHHHHHTTCEEEEEECBCH----H-HHHHHHHHHHHTTTTEEEEESCCHHHHHHHHH
T ss_pred eEEEEEccCccc--cCHHHHHHHHHHHHhcCceEEEEeCCch----H-HHHHHHHHHHhCCCcEEEecCCCHHHHHHHHh
Confidence 366677887652 22333444443 33555555433220 0 01011122223346776 5677333 25788
Q ss_pred cCCCcceeec----cCchhhHHHHhhCCCeeecCcccchhhHHHHHHHhh---------ceeEeeCCccCHHHHHHHHHH
Q 012563 349 HPAVGGFLTH----SGWNSTLESICEGVPMICQPCLADQMVNARYVSHVW---------RVGLHLEGKLEKKEIETAIRR 415 (460)
Q Consensus 349 ~~~~~~~I~H----GG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~l---------G~G~~~~~~~~~~~l~~~i~~ 415 (460)
.+++ +|.- |.-.++.||+++|+|+|+... ......+.+ - +.|..++. -+.++|.++|.+
T Consensus 365 ~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~~-~d~~~la~~i~~ 436 (485)
T 1rzu_A 365 GCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVID-ANHAALASKAATGVQFSP-VTLDGLKQAIRR 436 (485)
T ss_dssp HCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEESS-CSHHHHHHHHHH
T ss_pred cCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecc-cccccccccCCcceEeCC-CCHHHHHHHHHH
Confidence 9998 7743 335689999999999999554 344455554 2 46777763 689999999999
Q ss_pred Hh---ccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHhc
Q 012563 416 LM---VEAEGQEMRERITCLKKNVDACLRQGGSSHQALGRLVDHILS 459 (460)
Q Consensus 416 ll---~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (460)
++ +| .+.++ ++++..+ ++.-+.++.++++++..++
T Consensus 437 ll~~~~~---~~~~~---~~~~~~~---~~~fs~~~~~~~~~~~y~~ 474 (485)
T 1rzu_A 437 TVRYYHD---PKLWT---QMQKLGM---KSDVSWEKSAGLYAALYSQ 474 (485)
T ss_dssp HHHHHTC---HHHHH---HHHHHHH---TCCCBHHHHHHHHHHHHHH
T ss_pred HHHHhCC---HHHHH---HHHHHHH---HHhCChHHHHHHHHHHHHH
Confidence 99 66 33332 2232222 2566677777777776553
No 43
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.72 E-value=2.3e-06 Score=85.70 Aligned_cols=111 Identities=14% Similarity=0.079 Sum_probs=74.0
Q ss_pred CCCce-EEeccch--HHHhccCCCcceeec----cCchhhHHHHhhCCCeeecCcccchhhHHHHHHHhh---------c
Q 012563 332 DGRGY-IVQWAPQ--QQVLAHPAVGGFLTH----SGWNSTLESICEGVPMICQPCLADQMVNARYVSHVW---------R 395 (460)
Q Consensus 332 ~~~~~-~~~~vp~--~~lL~~~~~~~~I~H----GG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~l---------G 395 (460)
.+++. +..+... ..++..+++ +|.- |.-+++.||+++|+|+|+... ......+.+ - +
T Consensus 346 ~~~v~~~~g~~~~~~~~~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~ 418 (485)
T 2qzs_A 346 PGQVGVQIGYHEAFSHRIMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSD-CSLENLADGVA 418 (485)
T ss_dssp TTTEEEEESCCHHHHHHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCC
T ss_pred CCcEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceecc-Ccccccccccc
Confidence 46676 5677433 357899998 7743 334688999999999999644 344455554 2 4
Q ss_pred eeEeeCCccCHHHHHHHHHHHh---ccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHhc
Q 012563 396 VGLHLEGKLEKKEIETAIRRLM---VEAEGQEMRERITCLKKNVDACLRQGGSSHQALGRLVDHILS 459 (460)
Q Consensus 396 ~G~~~~~~~~~~~l~~~i~~ll---~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (460)
.|..++. -+.++|+++|.+++ +| .+.++ ++++..+ .+.-+.++.++++++.+++
T Consensus 419 ~G~l~~~-~d~~~la~~i~~ll~~~~~---~~~~~---~~~~~~~---~~~fs~~~~~~~~~~ly~~ 475 (485)
T 2qzs_A 419 SGFVFED-SNAWSLLRAIRRAFVLWSR---PSLWR---FVQRQAM---AMDFSWQVAAKSYRELYYR 475 (485)
T ss_dssp CBEEECS-SSHHHHHHHHHHHHHHHTS---HHHHH---HHHHHHH---HCCCCHHHHHHHHHHHHHH
T ss_pred ceEEECC-CCHHHHHHHHHHHHHHcCC---HHHHH---HHHHHHH---hhcCCHHHHHHHHHHHHHH
Confidence 6777764 68999999999999 56 33332 2222222 1566777788887777654
No 44
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.68 E-value=9e-06 Score=83.11 Aligned_cols=116 Identities=11% Similarity=0.076 Sum_probs=78.5
Q ss_pred CCceEEeccchH---HHhccCCCcceee---ccCchhhHHHHhhCCCeeecCcccchhhH-HHHHHHhhceeEeeCCccC
Q 012563 333 GRGYIVQWAPQQ---QVLAHPAVGGFLT---HSGWNSTLESICEGVPMICQPCLADQMVN-ARYVSHVWRVGLHLEGKLE 405 (460)
Q Consensus 333 ~~~~~~~~vp~~---~lL~~~~~~~~I~---HGG~~s~~eal~~GvP~v~~P~~~DQ~~n-a~~v~~~lG~G~~~~~~~~ 405 (460)
+++.+..++|+. .++..+++ ||. .|+.+++.||+++|+|+|++|-..=.... +..+.. .|+...+.. +
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~-~g~~e~v~~--~ 508 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHH-LGLDEMNVA--D 508 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHH-HTCGGGBCS--S
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHH-CCChhhhcC--C
Confidence 667889999853 47888888 762 26668999999999999998753211112 355666 477766653 8
Q ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH--hcCCChHHHHHHHHHHHhc
Q 012563 406 KKEIETAIRRLMVEAEGQEMRERITCLKKNVDACL--RQGGSSHQALGRLVDHILS 459 (460)
Q Consensus 406 ~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~--~~~g~~~~~~~~~~~~~~~ 459 (460)
.+++.+++.++++| ...++ ++++..++.+ .+..+.++.++++.+.+++
T Consensus 509 ~~~la~~i~~l~~~---~~~~~---~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~ 558 (568)
T 2vsy_A 509 DAAFVAKAVALASD---PAALT---ALHARVDVLRRASGVFHMDGFADDFGALLQA 558 (568)
T ss_dssp HHHHHHHHHHHHHC---HHHHH---HHHHHHHHHHHHSSTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC---HHHHH---HHHHHHHHhhhcCCCCCHHHHHHHHHHHHHH
Confidence 99999999999998 33332 3333333333 3556677777777666553
No 45
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.61 E-value=7.3e-06 Score=80.10 Aligned_cols=75 Identities=11% Similarity=0.046 Sum_probs=57.2
Q ss_pred CCCceEEeccchH---HHhccCCCcceee---ccC-chhhHHHH-------hhCCCeeecCcccchhhHHHHHHHhhcee
Q 012563 332 DGRGYIVQWAPQQ---QVLAHPAVGGFLT---HSG-WNSTLESI-------CEGVPMICQPCLADQMVNARYVSHVWRVG 397 (460)
Q Consensus 332 ~~~~~~~~~vp~~---~lL~~~~~~~~I~---HGG-~~s~~eal-------~~GvP~v~~P~~~DQ~~na~~v~~~lG~G 397 (460)
.+++.+..++|+. .++..+++ +|. +.| .+++.||+ ++|+|+|+... +.+. ..|
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G 330 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKS 330 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSS
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cce
Confidence 3566899999864 47888988 664 334 36789999 99999999654 5553 567
Q ss_pred Ee-eCCccCHHHHHHHHHHHhccc
Q 012563 398 LH-LEGKLEKKEIETAIRRLMVEA 420 (460)
Q Consensus 398 ~~-~~~~~~~~~l~~~i~~ll~~~ 420 (460)
.. ++. -+.++|+++|.++++|.
T Consensus 331 ~l~v~~-~d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 331 RFGYTP-GNADSVIAAITQALEAP 353 (406)
T ss_dssp EEEECT-TCHHHHHHHHHHHHHCC
T ss_pred EEEeCC-CCHHHHHHHHHHHHhCc
Confidence 76 663 58999999999999873
No 46
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.58 E-value=2.1e-07 Score=79.80 Aligned_cols=131 Identities=11% Similarity=0.109 Sum_probs=87.3
Q ss_pred EEEEecccccCCHHHHHHHHHHHHhC-CCCEEEEECCCCCCCchhhccCchhHHhhhCCCceEEeccch---HHHhccCC
Q 012563 276 IYVSFGSVAAINETEFLEIAWGLANS-RVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQ---QQVLAHPA 351 (460)
Q Consensus 276 v~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~---~~lL~~~~ 351 (460)
+++..|+... .+.+..+++++... +.+++++-.+..... +...........++|+.+..|+++ ..++..++
T Consensus 25 ~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~G~~~~~~~---l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~ad 99 (177)
T 2f9f_A 25 FWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIVGWFSKGDH---AERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCK 99 (177)
T ss_dssp CEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEEBCCCTTST---HHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCS
T ss_pred EEEEEecccc--ccCHHHHHHHHHhCCCcEEEEEecCccHHH---HHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhCC
Confidence 4456777663 34566677777776 455555443322111 111222112233568899999997 55888999
Q ss_pred Ccceee---ccCc-hhhHHHHhhCCCeeecCcccchhhHHHHHHHhhceeEeeCCccCHHHHHHHHHHHhccc
Q 012563 352 VGGFLT---HSGW-NSTLESICEGVPMICQPCLADQMVNARYVSHVWRVGLHLEGKLEKKEIETAIRRLMVEA 420 (460)
Q Consensus 352 ~~~~I~---HGG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~l~~~i~~ll~~~ 420 (460)
+ +|. +.|. .++.||+++|+|+|+.. ...+...+++. +.|..+ . -+.+++.++|.++++|.
T Consensus 100 i--~v~ps~~e~~~~~~~Eama~G~PvI~~~----~~~~~e~i~~~-~~g~~~-~-~d~~~l~~~i~~l~~~~ 163 (177)
T 2f9f_A 100 G--LLCTAKDEDFGLTPIEAMASGKPVIAVN----EGGFKETVINE-KTGYLV-N-ADVNEIIDAMKKVSKNP 163 (177)
T ss_dssp E--EEECCSSCCSCHHHHHHHHTTCCEEEES----SHHHHHHCCBT-TTEEEE-C-SCHHHHHHHHHHHHHCT
T ss_pred E--EEeCCCcCCCChHHHHHHHcCCcEEEeC----CCCHHHHhcCC-CccEEe-C-CCHHHHHHHHHHHHhCH
Confidence 8 776 3344 59999999999999954 45666667663 678777 3 68999999999999873
No 47
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.34 E-value=6.1e-05 Score=72.63 Aligned_cols=97 Identities=15% Similarity=0.229 Sum_probs=71.2
Q ss_pred CceEEeccch-HHHhccCCCcceeec-----cCchhhHHHHhhCCCeeecCcccchhhHHHHHHHhhceeEeeCCccCHH
Q 012563 334 RGYIVQWAPQ-QQVLAHPAVGGFLTH-----SGWNSTLESICEGVPMICQPCLADQMVNARYVSHVWRVGLHLEGKLEKK 407 (460)
Q Consensus 334 ~~~~~~~vp~-~~lL~~~~~~~~I~H-----GG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~ 407 (460)
++++.++... ..++..+++ ++.- +|..++.||+++|+|+|+-|..++.......+.+. |.++... +.+
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~~---d~~ 334 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEVK---NET 334 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEECC---SHH
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEeC---CHH
Confidence 3455555443 568888887 6642 23478999999999999877766666666666664 8776653 789
Q ss_pred HHHHHHHHHhccch-HHHHHHHHHHHHHHHH
Q 012563 408 EIETAIRRLMVEAE-GQEMRERITCLKKNVD 437 (460)
Q Consensus 408 ~l~~~i~~ll~~~~-~~~~~~~a~~l~~~~~ 437 (460)
+|.++|.++++| + ...+.+++++..+.-.
T Consensus 335 ~La~ai~~ll~d-~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 335 ELVTKLTELLSV-KKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp HHHHHHHHHHHS-CCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhH-HHHHHHHHHHHHHHHhcc
Confidence 999999999987 5 4678888887776554
No 48
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=98.27 E-value=0.0003 Score=71.06 Aligned_cols=164 Identities=16% Similarity=0.161 Sum_probs=93.1
Q ss_pred EEEEecccccCCHHHHHHHHHHHHh---CCCCEEEEECCCCCCCchhhccCchhHHhhhCCCceEEeccchH---HHhcc
Q 012563 276 IYVSFGSVAAINETEFLEIAWGLAN---SRVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQ---QVLAH 349 (460)
Q Consensus 276 v~vs~GS~~~~~~~~~~~~~~al~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~---~lL~~ 349 (460)
+++..|.... .+-+..+++|+.. .+.++++...+.. . ....-.......++++.+..+.+.. .+++.
T Consensus 329 ~i~~vgRl~~--~Kg~~~li~a~~~l~~~~~~l~l~G~G~~-~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 401 (536)
T 3vue_A 329 LIAFIGRLEE--QKGPDVMAAAIPELMQEDVQIVLLGTGKK-K----FEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAG 401 (536)
T ss_dssp EEEEECCBSG--GGCHHHHHHHHHHHTTSSCEEEEECCBCH-H----HHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHH
T ss_pred EEEEEeeccc--cCChHHHHHHHHHhHhhCCeEEEEeccCc-h----HHHHHHHHHhhcCCceEEEEeccHHHHHHHHHh
Confidence 4446677664 3344555555543 3455555433321 0 1111122334456777887776653 37888
Q ss_pred CCCcceeecc---Cc-hhhHHHHhhCCCeeecCcccchhhHHHHHHHhhceeEeeCC---------ccCHHHHHHHHHHH
Q 012563 350 PAVGGFLTHS---GW-NSTLESICEGVPMICQPCLADQMVNARYVSHVWRVGLHLEG---------KLEKKEIETAIRRL 416 (460)
Q Consensus 350 ~~~~~~I~HG---G~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~~~~---------~~~~~~l~~~i~~l 416 (460)
+++ ||.-. |. .+++||+++|+|+|+-.. ......|.+. .-|..... ..+.+.|.++|+++
T Consensus 402 aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~----gG~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~ai~ra 474 (536)
T 3vue_A 402 ADV--LAVPSRFEPCGLIQLQGMRYGTPCACAST----GGLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAATLKRA 474 (536)
T ss_dssp CSE--EEECCSCCSSCSHHHHHHHTTCCEEECSC----THHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHHHHHH
T ss_pred hhe--eecccccCCCCHHHHHHHHcCCCEEEcCC----CCchheeeCC-CCccccccCCCceeEECCCCHHHHHHHHHHH
Confidence 888 87542 33 589999999999999543 4455555552 34442211 34678999999988
Q ss_pred hccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHhcC
Q 012563 417 MVEAEGQEMRERITCLKKNVDACLRQGGSSHQALGRLVDHILSF 460 (460)
Q Consensus 417 l~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 460 (460)
+...+.+.++ +..++++++.-|=++.+++-.+..++|
T Consensus 475 l~~~~~~~~~-------~~~~~am~~~fSW~~~A~~y~~ly~~L 511 (536)
T 3vue_A 475 IKVVGTPAYE-------EMVRNCMNQDLSWKGPAKNWENVLLGL 511 (536)
T ss_dssp HHHTTSHHHH-------HHHHHHHHSCCSSHHHHHHHHHHHHTT
T ss_pred HHhcCcHHHH-------HHHHHHHHhcCCHHHHHHHHHHHHHHh
Confidence 7521113332 333444556666666666666666543
No 49
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.87 E-value=0.00033 Score=73.33 Aligned_cols=136 Identities=18% Similarity=0.232 Sum_probs=94.1
Q ss_pred CCCeEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEECCCCCCCchhhccCchhHHhhh------CCCceEEeccchH
Q 012563 271 APKSVIYVSFGSVAAINETEFLEIAWGLANSRVPFLWVVRPGLVDGVEWLEALPKGYLEMV------DGRGYIVQWAPQQ 344 (460)
Q Consensus 271 ~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~vp~~ 344 (460)
++..++|.||.+.....++.+...++-|++.+--++|....+... ..++.... ++++.+....|..
T Consensus 520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~--------~~~l~~~~~~~gi~~~r~~f~~~~~~~ 591 (723)
T 4gyw_A 520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVG--------EPNIQQYAQNMGLPQNRIIFSPVAPKE 591 (723)
T ss_dssp CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGG--------HHHHHHHHHHTTCCGGGEEEEECCCHH
T ss_pred CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHH--------HHHHHHHHHhcCCCcCeEEECCCCCHH
Confidence 456799999988888999999999999999988888887654311 12222211 2566777888865
Q ss_pred H---HhccCCCcceee---ccCchhhHHHHhhCCCeeecCcccch-hhHHHHHHHhhceeEeeCCccCHHHHHHHHHHHh
Q 012563 345 Q---VLAHPAVGGFLT---HSGWNSTLESICEGVPMICQPCLADQ-MVNARYVSHVWRVGLHLEGKLEKKEIETAIRRLM 417 (460)
Q Consensus 345 ~---lL~~~~~~~~I~---HGG~~s~~eal~~GvP~v~~P~~~DQ-~~na~~v~~~lG~G~~~~~~~~~~~l~~~i~~ll 417 (460)
+ .+..+|+ ++. .+|.+|++|||++|||+|.+|-..=- ..-+..+.. +|+...+- -+.++-.+.-.++-
T Consensus 592 ~~l~~~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~-~gl~e~ia--~~~~~Y~~~a~~la 666 (723)
T 4gyw_A 592 EHVRRGQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTC-LGCLELIA--KNRQEYEDIAVKLG 666 (723)
T ss_dssp HHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHH-HTCGGGBC--SSHHHHHHHHHHHH
T ss_pred HHHHHhCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHH-cCCccccc--CCHHHHHHHHHHHh
Confidence 5 4455666 875 88999999999999999999942211 122345555 57765553 46666666655676
Q ss_pred cc
Q 012563 418 VE 419 (460)
Q Consensus 418 ~~ 419 (460)
+|
T Consensus 667 ~d 668 (723)
T 4gyw_A 667 TD 668 (723)
T ss_dssp HC
T ss_pred cC
Confidence 67
No 50
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.81 E-value=0.0001 Score=61.87 Aligned_cols=143 Identities=15% Similarity=0.175 Sum_probs=82.4
Q ss_pred eEEEEEecccccCCHHHHHHHHHHHHhCCC--CE-EEEECCCCCCCchhhccCchhHHhhhCCCceEEeccchH---HHh
Q 012563 274 SVIYVSFGSVAAINETEFLEIAWGLANSRV--PF-LWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQ---QVL 347 (460)
Q Consensus 274 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~--~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~---~lL 347 (460)
+++++..|+... .+.+..+++++..+.. ++ ++.++.... ...+ ....++...++.+ .|+|+. .++
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~-----~~~~-~~~~~~~~~~v~~-g~~~~~~~~~~~ 72 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGKGPD-----EKKI-KLLAQKLGVKAEF-GFVNSNELLEIL 72 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECCSTT-----HHHH-HHHHHHHTCEEEC-CCCCHHHHHHHH
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeCCcc-----HHHH-HHHHHHcCCeEEE-eecCHHHHHHHH
Confidence 566777888754 3446667777776531 23 333443221 0111 1222223346677 998864 478
Q ss_pred ccCCCcceee----ccCchhhHHHHhhCC-CeeecCcccchhhHHHHHHHhhceeEeeCCccCHHHHHHHHHHHhccch-
Q 012563 348 AHPAVGGFLT----HSGWNSTLESICEGV-PMICQPCLADQMVNARYVSHVWRVGLHLEGKLEKKEIETAIRRLMVEAE- 421 (460)
Q Consensus 348 ~~~~~~~~I~----HGG~~s~~eal~~Gv-P~v~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~l~~~i~~ll~~~~- 421 (460)
..+++ +|. -|...++.||+++|+ |+|+....+ .....+.+. +. .+. .-+.+++.++|.++++|.+
T Consensus 73 ~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~---~~~~~~~~~-~~--~~~-~~~~~~l~~~i~~l~~~~~~ 143 (166)
T 3qhp_A 73 KTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLS---ATRQFALDE-RS--LFE-PNNAKDLSAKIDWWLENKLE 143 (166)
T ss_dssp TTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTC---GGGGGCSSG-GG--EEC-TTCHHHHHHHHHHHHHCHHH
T ss_pred HhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCC---chhhhccCC-ce--EEc-CCCHHHHHHHHHHHHhCHHH
Confidence 88888 775 233469999999996 999933221 111122232 33 233 3589999999999999843
Q ss_pred HHHHHHHHHHHHH
Q 012563 422 GQEMRERITCLKK 434 (460)
Q Consensus 422 ~~~~~~~a~~l~~ 434 (460)
...+.+++++..+
T Consensus 144 ~~~~~~~~~~~~~ 156 (166)
T 3qhp_A 144 RERMQNEYAKSAL 156 (166)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 2345555555443
No 51
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.75 E-value=0.00033 Score=66.63 Aligned_cols=102 Identities=11% Similarity=0.023 Sum_probs=64.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCCCCCCCCCCCc-eEEeCCCCCCCCCCCCHHHHHHHHHHhc
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSK--GFSITIIHTKFNSPNSCNYPHF-DFHSISDGLTDPSAEDSTTILITLNAKC 91 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~r--Gh~V~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (460)
|||+++...+.|++.-...+.+.|+++ +.+|++++.+...+.....+.+ +++.++.. .. .. .+
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~p~i~~v~~~~~~--~~----~~----~~---- 66 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMPLG--HG----AL----EI---- 66 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTCTTEEEEEEC-----------------CH----
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCCccCEEEEecCC--cc----cc----ch----
Confidence 799999999999999999999999987 9999999986444333434445 45555311 00 00 00
Q ss_pred chhHHHHHHHHhhcCCCCCCCCCCceEEEEcCcchHHH-HHhhcCCCeEE
Q 012563 92 MVPFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQFTH-VADEFKLPTII 140 (460)
Q Consensus 92 ~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~~~~-~A~~lgiP~v~ 140 (460)
..+....+.+.+. +||++|.-....-.. ++...|+|..+
T Consensus 67 -~~~~~l~~~l~~~---------~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 67 -GERRKLGHSLREK---------RYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp -HHHHHHHHHTTTT---------TCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred -HHHHHHHHHHHhc---------CCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 1122344445433 799999433333344 88888999854
No 52
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.73 E-value=0.00031 Score=60.85 Aligned_cols=78 Identities=13% Similarity=0.147 Sum_probs=60.0
Q ss_pred CceE-Eeccch---HHHhccCCCcceeecc---C-chhhHHHHhhCCCeeecCcccchhhHHHHHHHhhceeEeeCCccC
Q 012563 334 RGYI-VQWAPQ---QQVLAHPAVGGFLTHS---G-WNSTLESICEGVPMICQPCLADQMVNARYVSHVWRVGLHLEGKLE 405 (460)
Q Consensus 334 ~~~~-~~~vp~---~~lL~~~~~~~~I~HG---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~ 405 (460)
++.+ ..++++ ..++..+++ +|.-. | ..++.||+++|+|+|+... ......+ +. +.|..++. -+
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~-~~g~~~~~-~~ 166 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVKA-GD 166 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CT-TTCEEECT-TC
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-CC-CceEEecC-CC
Confidence 7888 899985 458888888 77533 3 4689999999999998643 4555566 53 77777763 58
Q ss_pred HHHHHHHHHHHhc-cc
Q 012563 406 KKEIETAIRRLMV-EA 420 (460)
Q Consensus 406 ~~~l~~~i~~ll~-~~ 420 (460)
.+++.++|.++++ |.
T Consensus 167 ~~~l~~~i~~l~~~~~ 182 (200)
T 2bfw_A 167 PGELANAILKALELSR 182 (200)
T ss_dssp HHHHHHHHHHHHHCCH
T ss_pred HHHHHHHHHHHHhcCH
Confidence 9999999999998 83
No 53
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.68 E-value=9.4e-05 Score=70.54 Aligned_cols=105 Identities=11% Similarity=0.062 Sum_probs=74.2
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCCCCCCCCCCCce-EEeCCCCCCCCCCCCHHHHHHHHH
Q 012563 12 RNGRRVILFPLPFQGHINPMLQLGSILYSK--GFSITIIHTKFNSPNSCNYPHFD-FHSISDGLTDPSAEDSTTILITLN 88 (460)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~lA~~L~~r--Gh~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 88 (460)
-+.+||+++-..+.|++.-..++.+.|+++ +.+|++++.+...+.....+.++ ++.++.. .....+.
T Consensus 6 l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~p~vd~vi~~~~~-------~~~~~~~--- 75 (349)
T 3tov_A 6 LDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYNPNIDELIVVDKK-------GRHNSIS--- 75 (349)
T ss_dssp CTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSCTTCSEEEEECCS-------SHHHHHH---
T ss_pred CCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCCCccEEEEeCcc-------cccccHH---
Confidence 456899999999999999999999999988 99999999976666666556665 5665521 0111111
Q ss_pred HhcchhHHHHHHHHhhcCCCCCCCCCCc-eEEEEcCcchHHH-HHhhcCCCeEE
Q 012563 89 AKCMVPFRNCLAKLVSNTNNNNAQEDSV-ACLITDFLWQFTH-VADEFKLPTII 140 (460)
Q Consensus 89 ~~~~~~l~~~l~~l~~~~~~~~~~~~~p-DlvI~D~~~~~~~-~A~~lgiP~v~ 140 (460)
.+...++++.+. ++ |++|.-....-.. ++...|+|..+
T Consensus 76 -----~~~~l~~~Lr~~---------~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 76 -----GLNEVAREINAK---------GKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp -----HHHHHHHHHHHH---------CCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred -----HHHHHHHHHhhC---------CCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 122344455444 79 9999765555555 88889999765
No 54
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.55 E-value=0.0014 Score=66.02 Aligned_cols=138 Identities=9% Similarity=0.032 Sum_probs=90.4
Q ss_pred CeEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEE--ECCCCCCCchhhccCchhHH-hhhCCCceEEeccchHH---H
Q 012563 273 KSVIYVSFGSVAAINETEFLEIAWGLANSRVPFLWV--VRPGLVDGVEWLEALPKGYL-EMVDGRGYIVQWAPQQQ---V 346 (460)
Q Consensus 273 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~vp~~~---l 346 (460)
..++|.+|++.....++.+....+-+.+.+..++|. .+........ +-..+. .-..+++.+...+|+.+ .
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~----~~~~~~~~GI~~Rv~F~g~~p~~e~la~ 515 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHP----YVERFIKSYLGDSATAHPHSPYHQYLRI 515 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHH----HHHHHHHHHHGGGEEEECCCCHHHHHHH
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHH----HHHHHHHcCCCccEEEcCCCCHHHHHHH
Confidence 378999999888788999999989998887777764 3422111100 111111 11235667788888755 4
Q ss_pred hccCCCcceee---ccCchhhHHHHhhCCCeeecCcccchhhH-HHHHHHhhceeEe-eCCccCHHHHHHHHHHHhcc
Q 012563 347 LAHPAVGGFLT---HSGWNSTLESICEGVPMICQPCLADQMVN-ARYVSHVWRVGLH-LEGKLEKKEIETAIRRLMVE 419 (460)
Q Consensus 347 L~~~~~~~~I~---HGG~~s~~eal~~GvP~v~~P~~~DQ~~n-a~~v~~~lG~G~~-~~~~~~~~~l~~~i~~ll~~ 419 (460)
+..+++ |+. .+|.+|++|||++|||+|..+-..=.-.. +..+.. +|+... +. -+.++..+...++.+|
T Consensus 516 y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~-~GLpE~LIA--~d~eeYv~~Av~La~D 588 (631)
T 3q3e_A 516 LHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKR-LGLPEWLIA--NTVDEYVERAVRLAEN 588 (631)
T ss_dssp HHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHH-TTCCGGGEE--SSHHHHHHHHHHHHHC
T ss_pred HhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHh-cCCCcceec--CCHHHHHHHHHHHhCC
Confidence 577777 664 37889999999999999998753211112 233445 476642 32 3788888888889988
No 55
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.41 E-value=0.00034 Score=66.17 Aligned_cols=111 Identities=14% Similarity=0.203 Sum_probs=82.5
Q ss_pred CceEEeccchHHH---hccCCCcceeeccCc---------hhhHHHHhhCCCeeecCcccchhhHHHHHHHhhceeEeeC
Q 012563 334 RGYIVQWAPQQQV---LAHPAVGGFLTHSGW---------NSTLESICEGVPMICQPCLADQMVNARYVSHVWRVGLHLE 401 (460)
Q Consensus 334 ~~~~~~~vp~~~l---L~~~~~~~~I~HGG~---------~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~~~ 401 (460)
|+.+.+|+|+.++ |+.++.+++.+-+.. +-+.|++++|+|+|+. +...++..+++. |+|..++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~----~~~~~~~~v~~~-~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQ----EGIANQELIENN-GLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEE----TTCTTTHHHHHH-TCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEc----cChhHHHHHHhC-CeEEEeC
Confidence 6689999998764 555566555533322 3578999999999984 456788899996 9999987
Q ss_pred CccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 012563 402 GKLEKKEIETAIRRLMVEAEGQEMRERITCLKKNVDACLRQGGSSHQALGRLVDHI 457 (460)
Q Consensus 402 ~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 457 (460)
+.+++.+++..+.. ++.+.+++|+++.+++++ .|--.++++.+.+-.+
T Consensus 290 ---~~~e~~~~i~~l~~-~~~~~m~~na~~~a~~~~----~~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 290 ---DVEEAIMKVKNVNE-DEYIELVKNVRSFNPILR----KGFFTRRLLTESVFQA 337 (339)
T ss_dssp ---SHHHHHHHHHHCCH-HHHHHHHHHHHHHTHHHH----TTHHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHHh
Confidence 46888889988653 345789999999999888 5666777777665543
No 56
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=96.06 E-value=0.11 Score=48.45 Aligned_cols=134 Identities=16% Similarity=0.073 Sum_probs=75.3
Q ss_pred CCeEEEEEeccccc---CCHHHHHHHHHHHHhCCCCEEEEECCCCCCCchhhccCchhHHhhhCCCceEEec--cc-hHH
Q 012563 272 PKSVIYVSFGSVAA---INETEFLEIAWGLANSRVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQW--AP-QQQ 345 (460)
Q Consensus 272 ~~~~v~vs~GS~~~---~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--vp-~~~ 345 (460)
+++.|.+..|+... .+.+.+.++++.+.+.+.++++..++.. + .+.-+.+.+..+ ++.+..- +. -.+
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~----e--~~~~~~i~~~~~-~~~l~g~~sl~el~a 249 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPH----E--EERAKRLAEGFA-YVEVLPKMSLEGVAR 249 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHH----H--HHHHHHHHTTCT-TEEECCCCCHHHHHH
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHH----H--HHHHHHHHhhCC-cccccCCCCHHHHHH
Confidence 45777778887654 5677788888888666677665544321 0 011122222222 2223222 22 366
Q ss_pred HhccCCCcceeec-cCchhhHHHHhhCCCeeec--CcccchhhHHHHHHHh--h-ceeEeeCCccCHHHHHHHHHHHhcc
Q 012563 346 VLAHPAVGGFLTH-SGWNSTLESICEGVPMICQ--PCLADQMVNARYVSHV--W-RVGLHLEGKLEKKEIETAIRRLMVE 419 (460)
Q Consensus 346 lL~~~~~~~~I~H-GG~~s~~eal~~GvP~v~~--P~~~DQ~~na~~v~~~--l-G~G~~~~~~~~~~~l~~~i~~ll~~ 419 (460)
+++++++ +|+. .|. ++=|.+.|+|+|++ |..... ++-+-... + |-..++. .++.+++.+++.+++++
T Consensus 250 li~~a~l--~I~~DSG~--~HlAaa~g~P~v~lfg~t~p~~--~~P~~~~~~~~~~~~~cm~-~I~~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 250 VLAGAKF--VVSVDTGL--SHLTAALDRPNITVYGPTDPGL--IGGYGKNQMVCRAPGNELS-QLTANAVKQFIEENAEK 322 (326)
T ss_dssp HHHTCSE--EEEESSHH--HHHHHHTTCCEEEEESSSCHHH--HCCCSSSEEEEECGGGCGG-GCCHHHHHHHHHHTTTT
T ss_pred HHHhCCE--EEecCCcH--HHHHHHcCCCEEEEECCCChhh--cCCCCCCceEecCCccccc-CCCHHHHHHHHHHHHHH
Confidence 9999999 9998 554 44466699999997 432111 11000000 0 0001122 68999999999999976
No 57
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=95.05 E-value=0.03 Score=54.43 Aligned_cols=78 Identities=14% Similarity=0.055 Sum_probs=56.5
Q ss_pred CCceEEeccchHH---HhccCCCcceeecc---Cc-hhhHHHHhhCCCeeecCcccchhhHHHHHHHhhceeEeeCCccC
Q 012563 333 GRGYIVQWAPQQQ---VLAHPAVGGFLTHS---GW-NSTLESICEGVPMICQPCLADQMVNARYVSHVWRVGLHLEGKLE 405 (460)
Q Consensus 333 ~~~~~~~~vp~~~---lL~~~~~~~~I~HG---G~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~ 405 (460)
+++.+..++|+.+ ++..+++ ||.-. |. .++.||+++|+|+|+ -..+ ....+++. ..|+.++. -+
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv~~-~d 365 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWH-SNIVSLEQ-LN 365 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTB-TTEEEESS-CS
T ss_pred CcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcC-CCEEEeCC-CC
Confidence 4557889998654 7888988 77432 33 578999999999998 3222 12344452 46877764 68
Q ss_pred HHHHHHHHHHHhcc
Q 012563 406 KKEIETAIRRLMVE 419 (460)
Q Consensus 406 ~~~l~~~i~~ll~~ 419 (460)
+++|+++|.++++|
T Consensus 366 ~~~la~ai~~ll~~ 379 (413)
T 2x0d_A 366 PENIAETLVELCMS 379 (413)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC
Confidence 99999999999987
No 58
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=92.44 E-value=2.2 Score=42.08 Aligned_cols=103 Identities=12% Similarity=0.139 Sum_probs=65.2
Q ss_pred EeccchHH---HhccCCCcceeec---cCch-hhHHHHhhCC-----CeeecCccc--chhhHHHHHHHhhceeEeeCCc
Q 012563 338 VQWAPQQQ---VLAHPAVGGFLTH---SGWN-STLESICEGV-----PMICQPCLA--DQMVNARYVSHVWRVGLHLEGK 403 (460)
Q Consensus 338 ~~~vp~~~---lL~~~~~~~~I~H---GG~~-s~~eal~~Gv-----P~v~~P~~~--DQ~~na~~v~~~lG~G~~~~~~ 403 (460)
..++++.+ ++..+++ ||.- =|+| +..||+++|+ |+|+--..+ ++. .-|+.++.
T Consensus 337 ~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l----------~~g~lv~p- 403 (482)
T 1uqt_A 337 NQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL----------TSALIVNP- 403 (482)
T ss_dssp CSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC----------TTSEEECT-
T ss_pred CCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHh----------CCeEEECC-
Confidence 47778654 7788888 7753 3654 8899999998 666644322 222 12455553
Q ss_pred cCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHhc
Q 012563 404 LEKKEIETAIRRLMVEAEGQEMRERITCLKKNVDACLRQGGSSHQALGRLVDHILS 459 (460)
Q Consensus 404 ~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (460)
.+.++++++|.++|++++ ..-+++.++..+..+ + -+..+.++++++.+++
T Consensus 404 ~d~~~lA~ai~~lL~~~~-~~r~~~~~~~~~~v~----~-~s~~~~a~~~l~~l~~ 453 (482)
T 1uqt_A 404 YDRDEVAAALDRALTMSL-AERISRHAEMLDVIV----K-NDINHWQECFISDLKQ 453 (482)
T ss_dssp TCHHHHHHHHHHHHTCCH-HHHHHHHHHHHHHHH----H-TCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHH----h-CCHHHHHHHHHHHHHh
Confidence 689999999999998521 223333333333333 3 3677777877777654
No 59
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=91.10 E-value=4.2 Score=40.01 Aligned_cols=109 Identities=11% Similarity=0.040 Sum_probs=69.4
Q ss_pred CceEEeccchH---HHhccCCCcceee---ccCchh-hHHHHhhC---CCeeecCcccchhhHHHHHHHhhceeEeeCCc
Q 012563 334 RGYIVQWAPQQ---QVLAHPAVGGFLT---HSGWNS-TLESICEG---VPMICQPCLADQMVNARYVSHVWRVGLHLEGK 403 (460)
Q Consensus 334 ~~~~~~~vp~~---~lL~~~~~~~~I~---HGG~~s-~~eal~~G---vP~v~~P~~~DQ~~na~~v~~~lG~G~~~~~~ 403 (460)
.+++...+|+. .++..+++ |+. +=|+|. ..|++++| .|+|+--+.+ .+..+.+ -|+.++.
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~~---~allVnP- 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLGE---YCRSVNP- 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHGG---GSEEECT-
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhCC---CEEEECC-
Confidence 46666778864 47777887 664 458874 58999996 6666543322 2232322 3666764
Q ss_pred cCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHh
Q 012563 404 LEKKEIETAIRRLMVEAEGQEMRERITCLKKNVDACLRQGGSSHQALGRLVDHIL 458 (460)
Q Consensus 404 ~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (460)
.+.++++++|.++|++.+ ++-+++.+++.+.++ .-....-.+.+++.++
T Consensus 423 ~D~~~lA~AI~~aL~m~~-~er~~r~~~~~~~V~-----~~d~~~W~~~fl~~L~ 471 (496)
T 3t5t_A 423 FDLVEQAEAISAALAAGP-RQRAEAAARRRDAAR-----PWTLEAWVQAQLDGLA 471 (496)
T ss_dssp TBHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHT-----TCBHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHh
Confidence 689999999999998632 344455555555554 3456666777776654
No 60
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=89.19 E-value=1.7 Score=44.36 Aligned_cols=45 Identities=18% Similarity=0.264 Sum_probs=32.8
Q ss_pred CCceEE---eccch---------HHHhccCCCcceeecc---Cc-hhhHHHHhhCCCeeecCc
Q 012563 333 GRGYIV---QWAPQ---------QQVLAHPAVGGFLTHS---GW-NSTLESICEGVPMICQPC 379 (460)
Q Consensus 333 ~~~~~~---~~vp~---------~~lL~~~~~~~~I~HG---G~-~s~~eal~~GvP~v~~P~ 379 (460)
++|.++ .|++. .+++..+++ ||.-. |+ .+.+||+++|+|+|+--.
T Consensus 490 drVKVIf~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~ 550 (725)
T 3nb0_A 490 DRVKMIFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNV 550 (725)
T ss_dssp CSEEEEECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETT
T ss_pred CceeEEEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCC
Confidence 455443 77765 458999998 77543 44 589999999999999444
No 61
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=88.69 E-value=0.22 Score=48.18 Aligned_cols=43 Identities=30% Similarity=0.355 Sum_probs=34.3
Q ss_pred cCCCCCcEEEEEcCCCC-----CChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 9 ISPRNGRRVILFPLPFQ-----GHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 9 ~~~~~~~~il~~~~~~~-----GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.+...+|||++++.... |=......+|++|+++||+|+++++.
T Consensus 41 ~~~~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~ 88 (413)
T 2x0d_A 41 TSSIKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTD 88 (413)
T ss_dssp ECCCCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESS
T ss_pred cCCCCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEec
Confidence 45567899999985522 33356899999999999999999985
No 62
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=87.62 E-value=6 Score=34.91 Aligned_cols=40 Identities=15% Similarity=0.065 Sum_probs=29.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCCCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNSPN 56 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~~ 56 (460)
||||+..=-+. |---+.+|++.|.+.| +|+++.++....-
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg 41 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSG 41 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTT
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccC
Confidence 78888764443 3445788999999988 9999999755433
No 63
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=85.43 E-value=17 Score=31.92 Aligned_cols=53 Identities=6% Similarity=-0.101 Sum_probs=34.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCC----CCCCceEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNSPNSC----NYPHFDFHSIS 69 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~~~~----~~~~~~~~~~~ 69 (460)
||||+.-==+. |---+..|++.|.+.| +|+++.++....-.. -...+++..++
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~ 57 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAITIAHPVRAYPHP 57 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSCCCSSCBEEEECC
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEec
Confidence 67776653333 2233788999999888 899999875543322 12346676664
No 64
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=82.17 E-value=1.8 Score=34.27 Aligned_cols=51 Identities=12% Similarity=0.079 Sum_probs=29.9
Q ss_pred CccccccccCCCCCcEEEEEcCCC---CCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 1 METKQESRISPRNGRRVILFPLPF---QGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 1 ~~~~~~~~~~~~~~~~il~~~~~~---~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
|+.+|.....+.+.+|++|+...+ .......+.+|...++.||+|+++.+.
T Consensus 2 ~~~~~~~~~~~~~~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~ 55 (134)
T 3mc3_A 2 MAQAQTQGQEEEQXXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMI 55 (134)
T ss_dssp ------------CCCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cchhhhhcccccccceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEe
Confidence 455666666666666666554443 567778889999999999999998884
No 65
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=82.04 E-value=14 Score=32.41 Aligned_cols=40 Identities=8% Similarity=0.105 Sum_probs=27.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCCCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNSPN 56 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~~ 56 (460)
||||+.-==+. |---+..|++.|.+.| +|+++.++....-
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg 40 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSA 40 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTT
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcC
Confidence 67776653333 2233788999999888 8999998755433
No 66
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=81.88 E-value=3.1 Score=36.90 Aligned_cols=37 Identities=22% Similarity=0.310 Sum_probs=24.4
Q ss_pred EEEEEcCCCCCChHH-HHHHHHHHHhCCCeEEEEeCCCCCC
Q 012563 16 RVILFPLPFQGHINP-MLQLGSILYSKGFSITIIHTKFNSP 55 (460)
Q Consensus 16 ~il~~~~~~~GHv~p-~l~lA~~L~~rGh~V~~~~~~~~~~ 55 (460)
|||+.- --|--.| +..|+++|.+.| +|+++.+.....
T Consensus 3 ~ILlTN--DDGi~apGi~~L~~~l~~~g-~V~VvAP~~~~S 40 (251)
T 2wqk_A 3 TFLLVN--DDGYFSPGINALREALKSLG-RVVVVAPDRNLS 40 (251)
T ss_dssp EEEEEC--SSCTTCHHHHHHHHHHTTTS-EEEEEEESSCCT
T ss_pred EEEEEc--CCCCCcHHHHHHHHHHHhCC-CEEEEeeCCCCc
Confidence 444443 3333444 778899999988 599999865443
No 67
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=79.69 E-value=9.8 Score=36.49 Aligned_cols=96 Identities=8% Similarity=0.000 Sum_probs=51.7
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCCCCCCCCCCCHHHHHHHHHHhc
Q 012563 12 RNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNSPNSCNYPHFDFHSISDGLTDPSAEDSTTILITLNAKC 91 (460)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (460)
+++.||+|++.+.... .+.++.++.|++|+++.+...........--+++.++.. . + ...+
T Consensus 3 ~~~k~l~Il~~~~~~~-----~i~~aa~~lG~~vv~v~~~~~~~~~~~~~~d~~~~~~~~-~-d----~~~~-------- 63 (425)
T 3vot_A 3 KRNKNLAIICQNKHLP-----FIFEEAERLGLKVTFFYNSAEDFPGNLPAVERCVPLPLF-E-D----EEAA-------- 63 (425)
T ss_dssp CCCCEEEEECCCTTCC-----HHHHHHHHTTCEEEEEEETTSCCCCSCTTEEEEEEECTT-T-C----HHHH--------
T ss_pred CCCcEEEEECCChhHH-----HHHHHHHHCCCEEEEEECCCcccccCHhhccEEEecCCC-C-C----HHHH--------
Confidence 4667888887554321 356778888999999876432211110111244555421 1 1 1111
Q ss_pred chhHHHHHHHHhhcCCCCCCCCCCceEEEE--cCcchHHH-HHhhcCCCe
Q 012563 92 MVPFRNCLAKLVSNTNNNNAQEDSVACLIT--DFLWQFTH-VADEFKLPT 138 (460)
Q Consensus 92 ~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~--D~~~~~~~-~A~~lgiP~ 138 (460)
.+.+.++.... ++|.|+. |.....+. +|+.+|+|.
T Consensus 64 ----~~~~~~~~~~~--------~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 64 ----MDVVRQTFVEF--------PFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp ----HHHHHHHHHHS--------CCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred ----HHHHHHhhhhc--------CCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 12223332221 7899885 43344455 899999994
No 68
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=77.99 E-value=8.4 Score=32.37 Aligned_cols=37 Identities=22% Similarity=0.422 Sum_probs=31.0
Q ss_pred cEEEEEcC--CCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 15 RRVILFPL--PFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~--~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
|+++.+.. |+-|-..-...||..|+++|++|.++-.+
T Consensus 1 M~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D 39 (206)
T 4dzz_A 1 MKVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTD 39 (206)
T ss_dssp CEEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 56666654 47788999999999999999999999875
No 69
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=75.26 E-value=4.6 Score=32.02 Aligned_cols=39 Identities=15% Similarity=0.147 Sum_probs=35.4
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
++.+|++.+.++-+|-....-++..|..+|++|+..+..
T Consensus 2 ~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~ 40 (137)
T 1ccw_A 2 EKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVL 40 (137)
T ss_dssp CCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCC
Confidence 456899999999999999999999999999999988863
No 70
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=74.56 E-value=9.1 Score=32.39 Aligned_cols=58 Identities=10% Similarity=0.126 Sum_probs=43.7
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCCCC------CCCCCCceEEeCCCCC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNSPN------SCNYPHFDFHSISDGL 72 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 72 (460)
+-.|.+++..+.|-..-.+.+|-..+.+|++|.|+........ ..+. ++++.....++
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L-~v~~~~~g~gf 91 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPH-GVEFQVMATGF 91 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGG-TCEEEECCTTC
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhC-CcEEEEccccc
Confidence 4578888889999999999999999999999999976432111 1222 47888777543
No 71
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=73.95 E-value=35 Score=27.84 Aligned_cols=142 Identities=13% Similarity=0.186 Sum_probs=83.3
Q ss_pred CeEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEECCCCCCCchhhccCchhHHhhhCCCceEEeccchHHHhccCCC
Q 012563 273 KSVIYVSFGSVAAINETEFLEIAWGLANSRVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPAV 352 (460)
Q Consensus 273 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~~ 352 (460)
+|.|-|-+||.. +-...+.....|+..+.++-..+... ...|+.+.+.. .+ .....+
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa--------HR~p~~l~~~~----------~~---a~~~g~ 67 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA--------HRTPDYMFEYA----------ET---ARERGL 67 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTSHHHHHHHH----------HH---TTTTTC
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEec--------cCCHHHHHHHH----------HH---HHhCCC
Confidence 466777788866 45677888888998888865555443 23555552111 00 111123
Q ss_pred cceeeccCchhhHHHHhh---CCCeeecCcccc--hhhHH-HHHHH--hhceeEe---eC--CccCHHHHHHHHHHHhcc
Q 012563 353 GGFLTHSGWNSTLESICE---GVPMICQPCLAD--QMVNA-RYVSH--VWRVGLH---LE--GKLEKKEIETAIRRLMVE 419 (460)
Q Consensus 353 ~~~I~HGG~~s~~eal~~---GvP~v~~P~~~D--Q~~na-~~v~~--~lG~G~~---~~--~~~~~~~l~~~i~~ll~~ 419 (460)
+++|.=+|.-.-+-++.+ -+|+|.+|.... ....+ --+.+ . |+.+. ++ ...+...++..|- -+.|
T Consensus 68 ~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~d 145 (170)
T 1xmp_A 68 KVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQMPG-GVPVATVAIGKAGSTNAGLLAAQIL-GSFH 145 (170)
T ss_dssp CEEEEEEESSCCHHHHHHTTCCSCEEEEEECCTTTTTHHHHHHHHCCCT-TCCCEECCSSHHHHHHHHHHHHHHH-HTTC
T ss_pred cEEEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCeeEEEecCCcchHHHHHHHHHHH-ccCC
Confidence 348888776544444444 469999999542 22222 11223 2 55422 22 1356666666665 4556
Q ss_pred chHHHHHHHHHHHHHHHHHHHhc
Q 012563 420 AEGQEMRERITCLKKNVDACLRQ 442 (460)
Q Consensus 420 ~~~~~~~~~a~~l~~~~~~~~~~ 442 (460)
..++++.+.+++++++.+.+
T Consensus 146 ---~~l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 146 ---DDIHDALELRREAIEKDVRE 165 (170)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHC
T ss_pred ---HHHHHHHHHHHHHHHHHHHh
Confidence 79999999999999876544
No 72
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=72.86 E-value=5 Score=34.42 Aligned_cols=38 Identities=18% Similarity=0.123 Sum_probs=33.4
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
+++||++--.|+.|-+. ...|.+.|.++|++|.++.++
T Consensus 3 ~~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~ 40 (209)
T 3zqu_A 3 GPERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISK 40 (209)
T ss_dssp SCSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECc
Confidence 34788888889988888 899999999999999999985
No 73
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=72.58 E-value=3.5 Score=33.80 Aligned_cols=40 Identities=18% Similarity=0.306 Sum_probs=36.4
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 12 RNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.++.+|++.+.++-+|-....-++..|..+|++|++....
T Consensus 16 ~~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~ 55 (161)
T 2yxb_A 16 RRRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLR 55 (161)
T ss_dssp CCSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSB
T ss_pred CCCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 3578999999999999999999999999999999998764
No 74
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=69.72 E-value=13 Score=31.42 Aligned_cols=43 Identities=9% Similarity=0.033 Sum_probs=33.2
Q ss_pred hhHHHHHHHHhhcCCCCCCCCCCceEEEEcCcchHHH-HHhhcCCCeEEEeCccHH
Q 012563 93 VPFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQFTH-VADEFKLPTIILQTHSVS 147 (460)
Q Consensus 93 ~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~~~~-~A~~lgiP~v~~~~~~~~ 147 (460)
..+.+.++++.+. ++|+||.+. .+. +|+++|+|.+.+.++.-+
T Consensus 129 ~e~~~~i~~l~~~---------G~~vvVG~~---~~~~~A~~~Gl~~vli~sg~eS 172 (196)
T 2q5c_A 129 DEITTLISKVKTE---------NIKIVVSGK---TVTDEAIKQGLYGETINSGEES 172 (196)
T ss_dssp GGHHHHHHHHHHT---------TCCEEEECH---HHHHHHHHTTCEEEECCCCHHH
T ss_pred HHHHHHHHHHHHC---------CCeEEECCH---HHHHHHHHcCCcEEEEecCHHH
Confidence 3456678888766 799999983 345 999999999998885443
No 75
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=69.58 E-value=7.1 Score=34.72 Aligned_cols=40 Identities=10% Similarity=0.073 Sum_probs=37.3
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 12 RNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.++.+|++.+.++-.|-....-++..|..+|++|++++.+
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~ 160 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD 160 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 5678999999999999999999999999999999999874
No 76
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=69.55 E-value=5.8 Score=33.96 Aligned_cols=40 Identities=15% Similarity=0.077 Sum_probs=36.6
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 12 RNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.++.+|++.+.++-.|-....-++..|..+|++|++++.+
T Consensus 86 ~~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~ 125 (210)
T 1y80_A 86 PSVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVD 125 (210)
T ss_dssp CCCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSS
T ss_pred CCCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 3467999999999999999999999999999999998874
No 77
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=68.91 E-value=6 Score=33.55 Aligned_cols=36 Identities=14% Similarity=0.032 Sum_probs=32.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhC-CCeEEEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSK-GFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~r-Gh~V~~~~~~ 51 (460)
|||++--.|+.|-+. ...+.+.|.++ |++|.++.++
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~ 37 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSK 37 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECc
Confidence 688888888888776 89999999999 9999999985
No 78
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=67.26 E-value=6.9 Score=32.45 Aligned_cols=38 Identities=18% Similarity=0.058 Sum_probs=32.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFN 53 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~ 53 (460)
+||++.-.|+.|=+. ...+.+.|.++|++|.++.++..
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A 43 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNG 43 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGG
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCH
Confidence 688888888877775 88999999999999999999543
No 79
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=66.52 E-value=43 Score=29.47 Aligned_cols=33 Identities=15% Similarity=0.131 Sum_probs=23.5
Q ss_pred CceEEEE-cCcc-hHHH-HHhhcCCCeEEEeCccHH
Q 012563 115 SVACLIT-DFLW-QFTH-VADEFKLPTIILQTHSVS 147 (460)
Q Consensus 115 ~pDlvI~-D~~~-~~~~-~A~~lgiP~v~~~~~~~~ 147 (460)
.||+||+ |+.. ..+. -|.++|||+|.+.-+.+-
T Consensus 158 ~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn~d 193 (256)
T 2vqe_B 158 LPDAIFVVDPTKEAIAVREARKLFIPVIALADTDSD 193 (256)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTTSC
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEecCCCC
Confidence 5888875 4433 3455 899999999998766443
No 80
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=66.01 E-value=34 Score=28.27 Aligned_cols=76 Identities=9% Similarity=0.157 Sum_probs=42.3
Q ss_pred eEEeccch-HHHh-ccCCCcceeeccCchhhHHH---HhhCCCeeecCcccchhhHHHHHHHhhcee-EeeCCccCHHHH
Q 012563 336 YIVQWAPQ-QQVL-AHPAVGGFLTHSGWNSTLES---ICEGVPMICQPCLADQMVNARYVSHVWRVG-LHLEGKLEKKEI 409 (460)
Q Consensus 336 ~~~~~vp~-~~lL-~~~~~~~~I~HGG~~s~~ea---l~~GvP~v~~P~~~DQ~~na~~v~~~lG~G-~~~~~~~~~~~l 409 (460)
.++.+.+. ..++ ..++ ..++--||.||+-|+ +..++|++++|.+. .....+... -.. +.+ .-+++++
T Consensus 92 i~~~~~~~Rk~~m~~~sd-a~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~-~~~~i~~--~~~~~e~ 164 (176)
T 2iz6_A 92 IVTGLGSARDNINALSSN-VLVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSL-DAGLVHV--AADVAGA 164 (176)
T ss_dssp EECCCCSSSCCCCGGGCS-EEEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHH-CTTTEEE--ESSHHHH
T ss_pred EEcCCHHHHHHHHHHhCC-EEEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChh-hcCeEEE--cCCHHHH
Confidence 34455554 2233 3444 456667888886654 66999999999843 111222221 111 111 3477777
Q ss_pred HHHHHHHhc
Q 012563 410 ETAIRRLMV 418 (460)
Q Consensus 410 ~~~i~~ll~ 418 (460)
.+.+.+.+.
T Consensus 165 ~~~l~~~~~ 173 (176)
T 2iz6_A 165 IAAVKQLLA 173 (176)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777776654
No 81
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=65.98 E-value=23 Score=30.79 Aligned_cols=23 Identities=26% Similarity=0.303 Sum_probs=20.2
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCC
Q 012563 30 PMLQLGSILYSKGFSITIIHTKF 52 (460)
Q Consensus 30 p~l~lA~~L~~rGh~V~~~~~~~ 52 (460)
...++|++|.++|++|++++.+.
T Consensus 31 mG~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 31 LGKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHHCCCEEEEEeCCc
Confidence 56789999999999999999854
No 82
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=64.70 E-value=19 Score=31.31 Aligned_cols=103 Identities=5% Similarity=-0.051 Sum_probs=57.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCCCCC---CCCCCCceEEeCCC-CCCCCCCCCHHHHHHHH
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSK--GFSITIIHTKFNSPN---SCNYPHFDFHSISD-GLTDPSAEDSTTILITL 87 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~r--Gh~V~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 87 (460)
.|||+|+.+|+.. .+.++.+.|.+. +++|..+.+...... .+...|+.+..++. .+.. .
T Consensus 22 ~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~~~~~-----r------- 86 (229)
T 3auf_A 22 MIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHMDPAAYPS-----R------- 86 (229)
T ss_dssp CEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEECCGGGSSS-----H-------
T ss_pred CcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEECcccccc-----h-------
Confidence 4699999877642 467777888776 688877776432211 12234677665542 1110 0
Q ss_pred HHhcchhHHHHHHHHhhcCCCCCCCCCCceEEEEcCcchH-HH-HHhhcCCCeEEEeCc
Q 012563 88 NAKCMVPFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQF-TH-VADEFKLPTIILQTH 144 (460)
Q Consensus 88 ~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~~-~~-~A~~lgiP~v~~~~~ 144 (460)
......+.+.++++ +||+||+-.+... .. +-......++-+.++
T Consensus 87 -~~~~~~~~~~l~~~------------~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 87 -TAFDAALAERLQAY------------GVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp -HHHHHHHHHHHHHT------------TCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred -hhccHHHHHHHHhc------------CCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 11111222333333 8999999876422 22 555566677776655
No 83
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=64.05 E-value=9 Score=32.98 Aligned_cols=40 Identities=18% Similarity=0.096 Sum_probs=36.0
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 12 RNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.++.+|++.+.++-.|-....-++..|..+|++|+..+.+
T Consensus 90 ~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~ 129 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVD 129 (215)
T ss_dssp --CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSS
T ss_pred CCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCC
Confidence 4568999999999999999999999999999999999875
No 84
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=63.27 E-value=11 Score=31.98 Aligned_cols=42 Identities=17% Similarity=0.007 Sum_probs=32.9
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNS 54 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~ 54 (460)
+++||++--.|+.|=+.-...+.+.|.++|++|.++.++...
T Consensus 6 ~~k~I~lgiTGs~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~ 47 (201)
T 3lqk_A 6 AGKHVGFGLTGSHCTYHEVLPQMERLVELGAKVTPFVTHTVQ 47 (201)
T ss_dssp TTCEEEEECCSCGGGGGGTHHHHHHHHHTTCEEEEECSSCSC
T ss_pred CCCEEEEEEEChHHHHHHHHHHHHHHhhCCCEEEEEEChhHH
Confidence 346788887787544437899999999999999999995433
No 85
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=62.56 E-value=63 Score=27.78 Aligned_cols=40 Identities=8% Similarity=0.022 Sum_probs=30.5
Q ss_pred CCcEEEEEcCCCCCChHHHHHHH------HHHHhCC-CeEEEEeCCC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLG------SILYSKG-FSITIIHTKF 52 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA------~~L~~rG-h~V~~~~~~~ 52 (460)
..++.++++.|+.+.++.++.-+ +.|.+.| .+|++.+...
T Consensus 26 ~~~~~VlVtgGS~~~~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~ 72 (224)
T 2jzc_A 26 IEEKALFVTCGATVPFPKLVSCVLSDEFCQELIQYGFVRLIIQFGRN 72 (224)
T ss_dssp CCSCCEEEECCSCCSCHHHHHHHTSHHHHHHHHTTTCCCEEECCCSS
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHHHHHHHHhcCCCeEEEEEECCC
Confidence 34567788889888789887766 8898888 6888877643
No 86
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=62.36 E-value=11 Score=31.69 Aligned_cols=46 Identities=7% Similarity=0.067 Sum_probs=27.0
Q ss_pred ccccccCCCCCcEEEEEcCCCCCCh----HHHHHHHHHHHhCCCeEEEEeC
Q 012563 4 KQESRISPRNGRRVILFPLPFQGHI----NPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 4 ~~~~~~~~~~~~~il~~~~~~~GHv----~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
-.+..+-...+|+|.+++... +.- .-...|++.|+++|+.|+.=..
T Consensus 3 ~~~~~~~~~~~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GGG 52 (189)
T 3sbx_A 3 GSTAKSDEPGRWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGGG 52 (189)
T ss_dssp ----------CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCB
T ss_pred CccCcCCCCCCeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 345667777789999999765 443 4467788888999998766543
No 87
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=61.73 E-value=12 Score=32.37 Aligned_cols=41 Identities=22% Similarity=0.189 Sum_probs=36.9
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 012563 12 RNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKF 52 (460)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~ 52 (460)
+.+++|++..-|+-|-..-++.+|..|+++|++|.++..+.
T Consensus 4 ~g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 4 RGRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CCCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 45789999999999999999999999999999999888753
No 88
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=61.50 E-value=68 Score=26.48 Aligned_cols=140 Identities=11% Similarity=0.121 Sum_probs=81.0
Q ss_pred CeEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEECCCCCCCchhhccCchhHHhhhCCCceEEeccchHHHhccCCC
Q 012563 273 KSVIYVSFGSVAAINETEFLEIAWGLANSRVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPAV 352 (460)
Q Consensus 273 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~~ 352 (460)
-|.|-|-+||.. +....+.....|+..+.++-..+... ...|+.+.+.. .+ .....+
T Consensus 13 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa--------HR~p~~l~~~~----------~~---a~~~g~ 69 (183)
T 1o4v_A 13 VPRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSA--------HRTPDRMFEYA----------KN---AEERGI 69 (183)
T ss_dssp -CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCT--------TTCHHHHHHHH----------HH---TTTTTC
T ss_pred CCeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc--------cCCHHHHHHHH----------HH---HHhCCC
Confidence 367778888866 55677788888888888765555443 23555552111 10 111122
Q ss_pred cceeeccCch----hhHHHHhhCCCeeecCcccc--hhhHH-HHHHHhh--ceeEee---CCccCHHHHHHHHHHHhccc
Q 012563 353 GGFLTHSGWN----STLESICEGVPMICQPCLAD--QMVNA-RYVSHVW--RVGLHL---EGKLEKKEIETAIRRLMVEA 420 (460)
Q Consensus 353 ~~~I~HGG~~----s~~eal~~GvP~v~~P~~~D--Q~~na-~~v~~~l--G~G~~~---~~~~~~~~l~~~i~~ll~~~ 420 (460)
+++|.=+|.- ++..++ .-+|+|.+|.... ....+ --+.+ + |+.+.. +...+...++..|- -+.|
T Consensus 70 ~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivq-mP~GvpVatV~Id~~~nAa~lAaqIl-a~~d- 145 (183)
T 1o4v_A 70 EVIIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQ-MPGGVPVATVAINNAKNAGILAASIL-GIKY- 145 (183)
T ss_dssp CEEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHT-CCTTCCCEECCTTCHHHHHHHHHHHH-HTTC-
T ss_pred cEEEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhc-CCCCCeeEEEecCCchHHHHHHHHHH-hcCC-
Confidence 3488877753 333333 5679999998542 22222 12334 4 533221 22556677776665 4456
Q ss_pred hHHHHHHHHHHHHHHHHHHHh
Q 012563 421 EGQEMRERITCLKKNVDACLR 441 (460)
Q Consensus 421 ~~~~~~~~a~~l~~~~~~~~~ 441 (460)
..++++.+.+++.+++.+.
T Consensus 146 --~~l~~kL~~~r~~~~~~v~ 164 (183)
T 1o4v_A 146 --PEIARKVKEYKERMKREVL 164 (183)
T ss_dssp --HHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHHHH
Confidence 6888888888888876543
No 89
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=61.12 E-value=69 Score=26.43 Aligned_cols=141 Identities=11% Similarity=0.145 Sum_probs=81.0
Q ss_pred CeEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEECCCCCCCchhhccCchhHHhhhCCCceEEeccchHHHhccCCC
Q 012563 273 KSVIYVSFGSVAAINETEFLEIAWGLANSRVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPAV 352 (460)
Q Consensus 273 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~~ 352 (460)
.+.|-|-+||.. +-...+.....|+..+.++-..+... ...|+.+.+.. .+ .....+
T Consensus 21 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa--------HR~p~~l~~~~----------~~---a~~~g~ 77 (182)
T 1u11_A 21 APVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVSA--------HRTPDRLADYA----------RT---AAERGL 77 (182)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTCHHHHHHHH----------HH---TTTTTC
T ss_pred CCEEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEcc--------cCCHHHHHHHH----------HH---HHhCCC
Confidence 345666777766 45677788888888888865555443 23555552111 00 111112
Q ss_pred cceeeccCch----hhHHHHhhCCCeeecCcccc--hhhHH-HHHHH--hhceeEe---eC--CccCHHHHHHHHHHHhc
Q 012563 353 GGFLTHSGWN----STLESICEGVPMICQPCLAD--QMVNA-RYVSH--VWRVGLH---LE--GKLEKKEIETAIRRLMV 418 (460)
Q Consensus 353 ~~~I~HGG~~----s~~eal~~GvP~v~~P~~~D--Q~~na-~~v~~--~lG~G~~---~~--~~~~~~~l~~~i~~ll~ 418 (460)
+++|.=.|.- ++..++ .-+|+|.+|.... ....+ --+.+ . |+.+. ++ ...+...++..|- -+.
T Consensus 78 ~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~ 154 (182)
T 1u11_A 78 NVIIAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIVQMPG-GVPVGTLAIGASGAKNAALLAASIL-ALY 154 (182)
T ss_dssp CEEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHCCCT-TSCCEECCSSHHHHHHHHHHHHHHH-GGG
T ss_pred cEEEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCceEEEecCCccchHHHHHHHHHH-ccC
Confidence 3488877753 333333 4679999998542 22222 11233 2 55522 22 1256666666664 455
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhc
Q 012563 419 EAEGQEMRERITCLKKNVDACLRQ 442 (460)
Q Consensus 419 ~~~~~~~~~~a~~l~~~~~~~~~~ 442 (460)
| ..++++.+.+++.+++.+.+
T Consensus 155 d---~~l~~kL~~~r~~~~~~v~~ 175 (182)
T 1u11_A 155 N---PALAARLETWRALQTASVPN 175 (182)
T ss_dssp C---HHHHHHHHHHHHHHHHHSCS
T ss_pred C---HHHHHHHHHHHHHHHHHHHH
Confidence 6 79999999999999876544
No 90
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=60.99 E-value=27 Score=33.87 Aligned_cols=86 Identities=12% Similarity=0.109 Sum_probs=52.0
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCCCCCCCCCCCHHHHHHHHHHhcch
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNSPNSCNYPHFDFHSISDGLTDPSAEDSTTILITLNAKCMV 93 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (460)
..|++++.- -.-.+.+++-|.+-|.+|+.+++....+...+.. . . .+ .. ..+.
T Consensus 313 Gkrv~i~~~-----~~~~~~l~~~L~elGm~vv~~~~~~~~~~~~~~~-~-----~-~v-------~~---~D~~----- 365 (458)
T 3pdi_B 313 SARTAIAAD-----PDLLLGFDALLRSMGAHTVAAVVPARAAALVDSP-L-----P-SV-------RV---GDLE----- 365 (458)
T ss_dssp TCEEEEECC-----HHHHHHHHHHHHTTTCEEEEEEESSCCSCCTTTT-S-----S-CE-------EE---SHHH-----
T ss_pred CCEEEEECC-----cHHHHHHHHHHHHCCCEEEEEEECCCChhhhhCc-c-----C-cE-------Ee---CCHH-----
Confidence 467888643 3456788999999999999988754322211110 0 0 00 00 0110
Q ss_pred hHHHHHHHHhhcCCCCCCCCCCceEEEEcCcchHHH-HHhhcCCCeEEE
Q 012563 94 PFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQFTH-VADEFKLPTIIL 141 (460)
Q Consensus 94 ~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~~~~-~A~~lgiP~v~~ 141 (460)
.+.+.+++. +||++|.... .. +|+++|||++.+
T Consensus 366 ~le~~i~~~------------~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 366 DLEHAARAG------------QAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp HHHHHHHHH------------TCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred HHHHHHHhc------------CCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 123334444 8999999843 56 999999999974
No 91
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=60.72 E-value=11 Score=32.28 Aligned_cols=39 Identities=18% Similarity=0.074 Sum_probs=33.4
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNS 54 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~ 54 (460)
++||++.-.|+.+-+. ...+.+.|.++| +|.++.++...
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~ 57 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSL 57 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGG
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHH
Confidence 5789998889998777 899999999999 99999996433
No 92
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=60.49 E-value=19 Score=34.69 Aligned_cols=42 Identities=7% Similarity=0.245 Sum_probs=36.0
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNS 54 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~ 54 (460)
++..|+++..++.|-..-+..||..|+++|++|.++..+...
T Consensus 99 ~p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R 140 (443)
T 3dm5_A 99 KPTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWR 140 (443)
T ss_dssp SSEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSS
T ss_pred CCeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 356778888889999999999999999999999999986443
No 93
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=60.20 E-value=6.9 Score=31.33 Aligned_cols=34 Identities=15% Similarity=0.167 Sum_probs=26.6
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.+.||+++-. |++- ..+++.|.++||+|+++...
T Consensus 2 ~~~~vlI~G~---G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGH---SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCSCEEEECC---SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCcEEEECC---CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 4578888843 5443 78899999999999999873
No 94
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=59.64 E-value=9.1 Score=32.70 Aligned_cols=38 Identities=11% Similarity=0.020 Sum_probs=29.9
Q ss_pred CcEEEEEcCCCCCChHH-HHHHHHHHHhCCCeEEEEeCCC
Q 012563 14 GRRVILFPLPFQGHINP-MLQLGSILYSKGFSITIIHTKF 52 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p-~l~lA~~L~~rGh~V~~~~~~~ 52 (460)
++||++.-.|+. ..+- ...+.+.|.++|++|.++.++.
T Consensus 5 ~k~IllgiTGsi-aayk~~~~ll~~L~~~g~eV~vv~T~~ 43 (207)
T 3mcu_A 5 GKRIGFGFTGSH-CTYEEVMPHLEKLIAEGAEVRPVVSYT 43 (207)
T ss_dssp TCEEEEEECSCG-GGGTTSHHHHHHHHHTTCEEEEEECC-
T ss_pred CCEEEEEEEChH-HHHHHHHHHHHHHHhCCCEEEEEEehH
Confidence 457777776764 4554 8899999999999999999953
No 95
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=59.46 E-value=14 Score=32.78 Aligned_cols=46 Identities=11% Similarity=-0.022 Sum_probs=30.9
Q ss_pred cCCCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCCCC
Q 012563 9 ISPRNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNSPN 56 (460)
Q Consensus 9 ~~~~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~~ 56 (460)
+...++||||+..=-+. |---+.+|++.|.+ +|+|+++.++....-
T Consensus 6 ~~~~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg 51 (261)
T 3ty2_A 6 KTATPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSG 51 (261)
T ss_dssp -----CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTT
T ss_pred hccCCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcC
Confidence 34566799988875444 44457888999977 899999999755433
No 96
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=59.23 E-value=8 Score=30.03 Aligned_cols=33 Identities=27% Similarity=0.464 Sum_probs=24.6
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+.|+|+++-. |.+ ...+|+.|.++||+|+++..
T Consensus 3 ~~m~i~IiG~---G~i--G~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 3 HGMYIIIAGI---GRV--GYTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp --CEEEEECC---SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECC---CHH--HHHHHHHHHhCCCeEEEEEC
Confidence 3589998843 554 34688999999999999876
No 97
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=59.22 E-value=44 Score=30.15 Aligned_cols=40 Identities=10% Similarity=0.208 Sum_probs=31.9
Q ss_pred CCcEEEEEcC--CCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 012563 13 NGRRVILFPL--PFQGHINPMLQLGSILYSKGFSITIIHTKF 52 (460)
Q Consensus 13 ~~~~il~~~~--~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~ 52 (460)
+++++++++. |+-|-..-...||..|+++|.+|.++-.+.
T Consensus 102 ~~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 143 (299)
T 3cio_A 102 TENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADL 143 (299)
T ss_dssp CSCCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 3455555554 577899999999999999999999998654
No 98
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=59.13 E-value=6.2 Score=35.66 Aligned_cols=33 Identities=27% Similarity=0.422 Sum_probs=25.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
|||++. |+.|-+- ..|++.|.++||+|+.++..
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 887765 5556553 56899999999999999863
No 99
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=57.90 E-value=15 Score=29.25 Aligned_cols=39 Identities=15% Similarity=0.140 Sum_probs=29.8
Q ss_pred CCcEEEEEcCC--CCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 13 NGRRVILFPLP--FQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 13 ~~~~il~~~~~--~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.-|+++++-.- ..-.+--.+=++..|.++||+|++++++
T Consensus 5 ~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~np 45 (157)
T 1kjn_A 5 STGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANP 45 (157)
T ss_dssp -CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred cceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCH
Confidence 35777776533 4466666888899999999999999985
No 100
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=57.04 E-value=71 Score=28.58 Aligned_cols=40 Identities=13% Similarity=0.209 Sum_probs=31.3
Q ss_pred CcEEEEEcC--CCCCChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 012563 14 GRRVILFPL--PFQGHINPMLQLGSILYSKGFSITIIHTKFN 53 (460)
Q Consensus 14 ~~~il~~~~--~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~ 53 (460)
+.++++++. |+-|-..-...||..|++.|.+|.++-.+..
T Consensus 91 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~~ 132 (286)
T 3la6_A 91 QNNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDMR 132 (286)
T ss_dssp TCCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccCC
Confidence 445555544 4778899999999999999999999977643
No 101
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=57.00 E-value=76 Score=25.59 Aligned_cols=138 Identities=9% Similarity=0.071 Sum_probs=75.6
Q ss_pred eEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEECCCCCCCchhhccCchhHHhhhCCCceEEeccchHHHhccC-CC
Q 012563 274 SVIYVSFGSVAAINETEFLEIAWGLANSRVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHP-AV 352 (460)
Q Consensus 274 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~-~~ 352 (460)
+.|-|-+||.. +....+.....++..+.++-..+... ...|+.+.+ |+... ... ..
T Consensus 3 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~sa--------HR~p~~~~~----------~~~~a---~~~~~~ 59 (159)
T 3rg8_A 3 PLVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSA--------HKTAEHVVS----------MLKEY---EALDRP 59 (159)
T ss_dssp CEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCT--------TTCHHHHHH----------HHHHH---HTSCSC
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcc--------cCCHHHHHH----------HHHHh---hhcCCC
Confidence 44666677755 45667778888888888765555443 235555521 11111 111 23
Q ss_pred cceeeccCchhhHHHHh---hCCCeeecCcccchh-hHH-HHHHHhh--ceeEe-eCCccCHHHHHHHHHHHhccchHHH
Q 012563 353 GGFLTHSGWNSTLESIC---EGVPMICQPCLADQM-VNA-RYVSHVW--RVGLH-LEGKLEKKEIETAIRRLMVEAEGQE 424 (460)
Q Consensus 353 ~~~I~HGG~~s~~eal~---~GvP~v~~P~~~DQ~-~na-~~v~~~l--G~G~~-~~~~~~~~~l~~~i~~ll~~~~~~~ 424 (460)
+++|.=+|.-.-+-++. .-+|+|.+|...-.. ... --+.+ + |+.+. ++...+...++..|- -+.| ..
T Consensus 60 ~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dLlS~vq-mp~GvpVatv~~~~nAa~lA~~Il-~~~d---~~ 134 (159)
T 3rg8_A 60 KLYITIAGRSNALSGFVDGFVKGATIACPPPSDSFAGADIYSSLR-MPSGISPALVLEPKNAALLAARIF-SLYD---KE 134 (159)
T ss_dssp EEEEEECCSSCCHHHHHHHHSSSCEEECCCCCCGGGGTHHHHHHC-CCTTCCCEECCSHHHHHHHHHHHH-TTTC---HH
T ss_pred cEEEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCCccHHHHHh-CCCCCceEEecCchHHHHHHHHHH-hCCC---HH
Confidence 44888877543333333 457999999743111 111 11122 2 43322 232456666665554 3445 78
Q ss_pred HHHHHHHHHHHHHHH
Q 012563 425 MRERITCLKKNVDAC 439 (460)
Q Consensus 425 ~~~~a~~l~~~~~~~ 439 (460)
++++.+.+++.+++.
T Consensus 135 l~~kl~~~r~~~~~~ 149 (159)
T 3rg8_A 135 IADSVKSYMESNAQK 149 (159)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 899888888888754
No 102
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=56.27 E-value=40 Score=28.33 Aligned_cols=30 Identities=10% Similarity=0.186 Sum_probs=24.3
Q ss_pred CCcceeeccCchhhHHHHhhCCCeeecCccc
Q 012563 351 AVGGFLTHSGWNSTLESICEGVPMICQPCLA 381 (460)
Q Consensus 351 ~~~~~I~HGG~~s~~eal~~GvP~v~~P~~~ 381 (460)
..+++|+.||.......- .++|+|-++..+
T Consensus 51 ~~dVIISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 51 EVDAIISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp TCSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCeEEEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 334499999998888875 579999999864
No 103
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=54.88 E-value=22 Score=30.57 Aligned_cols=102 Identities=11% Similarity=0.097 Sum_probs=55.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCC--eEEEEeCCCCCCCC---CCCCCceEEeCCC-CCCCCCCCCHHHHHHHHH
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGF--SITIIHTKFNSPNS---CNYPHFDFHSISD-GLTDPSAEDSTTILITLN 88 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh--~V~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 88 (460)
|||+|+.+|+.. -+.++.+.|.+.+| +|..+.+....... +...|+.+..++. .+. + +
T Consensus 2 ~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~~~~-----~--------r 65 (216)
T 2ywr_A 2 LKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKHNVECKVIQRKEFP-----S--------K 65 (216)
T ss_dssp EEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHHTCCEEECCGGGSS-----S--------H
T ss_pred CEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHcCCCEEEeCccccc-----c--------h
Confidence 588888766653 46777788888888 77766653322111 1123555555431 111 0 0
Q ss_pred HhcchhHHHHHHHHhhcCCCCCCCCCCceEEEEcCcchH-HH-HHhhcCCCeEEEeCc
Q 012563 89 AKCMVPFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQF-TH-VADEFKLPTIILQTH 144 (460)
Q Consensus 89 ~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~~-~~-~A~~lgiP~v~~~~~ 144 (460)
......+.+.++++ +||++|+-.+... .. +-....-.++.+.++
T Consensus 66 ~~~~~~~~~~l~~~------------~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 66 KEFEERMALELKKK------------GVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp HHHHHHHHHHHHHT------------TCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred hhhhHHHHHHHHhc------------CCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 11111222333333 8999998766422 22 555555667776665
No 104
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=53.59 E-value=53 Score=32.49 Aligned_cols=35 Identities=17% Similarity=0.133 Sum_probs=25.3
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFN 53 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~ 53 (460)
..+++++.-+. -.+.+++.|.+-|.+|+.+++...
T Consensus 335 GKrv~i~~~~~-----~~~~l~~~l~ElGm~vv~~~t~~~ 369 (533)
T 1mio_A 335 GKTACLYVGGS-----RSHTYMNMLKSFGVDSLVAGFEFA 369 (533)
T ss_dssp TCEEEEEESSS-----HHHHHHHHHHHHTCEEEEEEESSC
T ss_pred CCEEEEECCch-----HHHHHHHHHHHCCCEEEEEEeccC
Confidence 46888876442 356677788888999999987543
No 105
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=52.51 E-value=11 Score=31.75 Aligned_cols=37 Identities=11% Similarity=-0.004 Sum_probs=31.8
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
++||++.-.|+.|=+. ...+.+.|.++|++|.++.++
T Consensus 8 ~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~ 44 (194)
T 1p3y_1 8 DKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTK 44 (194)
T ss_dssp GCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEch
Confidence 4588888888887776 789999999999999999985
No 106
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=52.45 E-value=23 Score=29.68 Aligned_cols=36 Identities=19% Similarity=0.288 Sum_probs=31.2
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
+||++.-.|+.|-+ =...+.++|.++|++|.++.++
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~ 37 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISR 37 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEECh
Confidence 47888888998855 5799999999999999999885
No 107
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=52.09 E-value=99 Score=25.44 Aligned_cols=142 Identities=13% Similarity=0.166 Sum_probs=81.5
Q ss_pred CeEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEECCCCCCCchhhccCchhHHhhhCCCceEEeccchHHHhccCCC
Q 012563 273 KSVIYVSFGSVAAINETEFLEIAWGLANSRVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPAV 352 (460)
Q Consensus 273 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~~ 352 (460)
+|.|-|=+||.. +-...+.....|++.+..+-..+-.. ...|+.+.+.. .-.....+
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SA--------HRtp~~l~~~~-------------~~a~~~g~ 78 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA--------HRTPDYMFEYA-------------ETARERGL 78 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTSHHHHHHHH-------------HHTTTTTC
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcc--------ccChHHHHHHH-------------HHHHhcCc
Confidence 577888889977 45678888899999998876655443 22455542111 11112233
Q ss_pred cceeeccCchhhHHHH---hhCCCeeecCcccch---hhHHHHHHHhhceeEeeCC-c------cCHHHHHHHHHHHhcc
Q 012563 353 GGFLTHSGWNSTLESI---CEGVPMICQPCLADQ---MVNARYVSHVWRVGLHLEG-K------LEKKEIETAIRRLMVE 419 (460)
Q Consensus 353 ~~~I~HGG~~s~~eal---~~GvP~v~~P~~~DQ---~~na~~v~~~lG~G~~~~~-~------~~~~~l~~~i~~ll~~ 419 (460)
+++|.=.|.-.-+-++ ..-+|+|.+|....- .+.---+.+ +--|+-+-. . .+..-++..|- -+.|
T Consensus 79 ~ViIa~AG~aahLpGvvAa~T~~PVIGVPv~s~~l~G~DsLlSivQ-MP~GvpVaTvaig~~ga~NAallA~qIL-a~~d 156 (181)
T 4b4k_A 79 KVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQ-MPGGVPVATVAIGKAGSTNAGLLAAQIL-GSFH 156 (181)
T ss_dssp CEEEEEECSSCCHHHHHHTTCCSCEEEEECCCTTTTTHHHHHHHHT-CCTTCCCEECCSSHHHHHHHHHHHHHHH-TTTC
T ss_pred eEEEEeccccccchhhHHhcCCCCEEEEecCCCCccchhhHHHHHh-CCCCCceEEEecCCccHHHHHHHHHHHH-ccCC
Confidence 4488777754333333 345699999996432 222234444 333433322 2 23344444442 2446
Q ss_pred chHHHHHHHHHHHHHHHHHHHhc
Q 012563 420 AEGQEMRERITCLKKNVDACLRQ 442 (460)
Q Consensus 420 ~~~~~~~~~a~~l~~~~~~~~~~ 442 (460)
++++++.+.+++.+++.+.+
T Consensus 157 ---~~l~~kl~~~r~~~~~~v~~ 176 (181)
T 4b4k_A 157 ---DDIHDALELRREAIEKDVRE 176 (181)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHHH
Confidence 78999999999888865543
No 108
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=52.05 E-value=97 Score=25.35 Aligned_cols=139 Identities=15% Similarity=0.187 Sum_probs=78.4
Q ss_pred CeEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEECCCCCCCchhhccCchhHHhhhCCCceEEeccchHHHhccCCC
Q 012563 273 KSVIYVSFGSVAAINETEFLEIAWGLANSRVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPAV 352 (460)
Q Consensus 273 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~~ 352 (460)
++.|-|-+||.. +....+.....++..+.++-..+... ...|+.+. +|+.... -...++
T Consensus 7 ~~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~Sa--------HR~p~~~~----------~~~~~a~-~~g~~V 65 (174)
T 3lp6_A 7 RPRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSA--------HRTPEAMF----------SYARGAA-ARGLEV 65 (174)
T ss_dssp CCSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTCHHHHH----------HHHHHHH-HHTCCE
T ss_pred CCeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECC--------CCCHHHHH----------HHHHHHH-hCCCCE
Confidence 345666677766 45667788888888888866555443 23555552 1111110 123344
Q ss_pred cceeeccCchhhHHHHh---hCCCeeecCcccch--hhHH-HHHHHhh--ce--eEee-CCccCHHHHHHHHHHHhccch
Q 012563 353 GGFLTHSGWNSTLESIC---EGVPMICQPCLADQ--MVNA-RYVSHVW--RV--GLHL-EGKLEKKEIETAIRRLMVEAE 421 (460)
Q Consensus 353 ~~~I~HGG~~s~~eal~---~GvP~v~~P~~~DQ--~~na-~~v~~~l--G~--G~~~-~~~~~~~~l~~~i~~ll~~~~ 421 (460)
+|.=+|...-+-++. .-+|+|.+|...-. ...+ --+.+ + |+ +... +...+...++..|-. +.|
T Consensus 66 --iIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlS~vq-mp~GvpVatV~I~~~~nAa~lAa~Il~-~~d-- 139 (174)
T 3lp6_A 66 --IIAGAGGAAHLPGMVAAATPLPVIGVPVPLGRLDGLDSLLSIVQ-MPAGVPVATVSIGGAGNAGLLAVRMLG-AAN-- 139 (174)
T ss_dssp --EEEEEESSCCHHHHHHHHCSSCEEEEEECCSSGGGHHHHHHHHC-CCTTCCCEECCTTCHHHHHHHHHHHHH-TTC--
T ss_pred --EEEecCchhhhHHHHHhccCCCEEEeeCCCCCCCCHHHHHHHhh-CCCCCeeEEEEcCcchHHHHHHHHHHh-CCC--
Confidence 888877543333332 45799999986321 1121 11222 2 43 3222 224566666666643 445
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 012563 422 GQEMRERITCLKKNVDAC 439 (460)
Q Consensus 422 ~~~~~~~a~~l~~~~~~~ 439 (460)
..++++.+.+++++++.
T Consensus 140 -~~l~~kl~~~r~~~~~~ 156 (174)
T 3lp6_A 140 -PQLRARIVAFQDRLADV 156 (174)
T ss_dssp -HHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHH
Confidence 78999999999888864
No 109
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=51.67 E-value=15 Score=32.51 Aligned_cols=40 Identities=25% Similarity=0.159 Sum_probs=34.9
Q ss_pred CCcEEEEEcCC---CCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 012563 13 NGRRVILFPLP---FQGHINPMLQLGSILYSKGFSITIIHTKF 52 (460)
Q Consensus 13 ~~~~il~~~~~---~~GHv~p~l~lA~~L~~rGh~V~~~~~~~ 52 (460)
..||..|++.| +.|-=.-..+|+..|.+||++|+..--++
T Consensus 21 ~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DP 63 (295)
T 2vo1_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDP 63 (295)
T ss_dssp CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEEC
T ss_pred ccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeeccc
Confidence 46899999988 56777889999999999999999988653
No 110
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=51.37 E-value=38 Score=31.55 Aligned_cols=38 Identities=16% Similarity=0.222 Sum_probs=24.7
Q ss_pred CeEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEECCC
Q 012563 273 KSVIYVSFGSVAAINETEFLEIAWGLANSRVPFLWVVRPG 312 (460)
Q Consensus 273 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 312 (460)
+.+++.+.||.+-. .-...++++|.+.++++.|+....
T Consensus 3 ~~i~i~~GGTgGHi--~palala~~L~~~g~~V~~vg~~~ 40 (365)
T 3s2u_A 3 GNVLIMAGGTGGHV--FPALACAREFQARGYAVHWLGTPR 40 (365)
T ss_dssp CEEEEECCSSHHHH--HHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CcEEEEcCCCHHHH--HHHHHHHHHHHhCCCEEEEEECCc
Confidence 35666666664421 123457888988899999987554
No 111
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=50.16 E-value=8.9 Score=35.94 Aligned_cols=44 Identities=23% Similarity=0.178 Sum_probs=29.0
Q ss_pred cccccccCCCCCc-EEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 3 TKQESRISPRNGR-RVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 3 ~~~~~~~~~~~~~-~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
++|-+.-...-+| +|+|+-.|..| ..+|..|+++||+|+++...
T Consensus 3 ~~~~~~~~~~m~M~kI~iIG~G~mG-----~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 3 TKQHSAKDELLYLNKAVVFGSGAFG-----TALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp ------CCCCCCEEEEEEECCSHHH-----HHHHHHHTTTEEEEEEECSC
T ss_pred cchhhhhhHhhccCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 4444333333346 89999887766 56899999999999998753
No 112
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=49.92 E-value=14 Score=33.73 Aligned_cols=82 Identities=13% Similarity=0.045 Sum_probs=47.6
Q ss_pred eEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEECCCCCCCchhhccCchhHHhhhCCCceEEeccchHHHhccCCCc
Q 012563 274 SVIYVSFGSVAAINETEFLEIAWGLANSRVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPAVG 353 (460)
Q Consensus 274 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~~~ 353 (460)
-.+.++--|......+.+..+...|...+..+.+.......+ ...+. .++....++
T Consensus 11 ~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~~~--------a~~~~---------------~~~~~~~d~- 66 (304)
T 3s40_A 11 VLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQGD--------ATKYC---------------QEFASKVDL- 66 (304)
T ss_dssp EEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCSTTH--------HHHHH---------------HHHTTTCSE-
T ss_pred EEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCcch--------HHHHH---------------HHhhcCCCE-
Confidence 334445433332223556677788877777666554332210 01110 011123455
Q ss_pred ceeeccCchhhHHHHh------hCCCeeecCcc
Q 012563 354 GFLTHSGWNSTLESIC------EGVPMICQPCL 380 (460)
Q Consensus 354 ~~I~HGG~~s~~eal~------~GvP~v~~P~~ 380 (460)
+|.-||-||+.|++. .++|+-++|..
T Consensus 67 -vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~G 98 (304)
T 3s40_A 67 -IIVFGGDGTVFECTNGLAPLEIRPTLAIIPGG 98 (304)
T ss_dssp -EEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred -EEEEccchHHHHHHHHHhhCCCCCcEEEecCC
Confidence 999999999999864 57899999983
No 113
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=49.54 E-value=40 Score=27.82 Aligned_cols=33 Identities=15% Similarity=0.345 Sum_probs=25.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
|+|+++ |+.|-+ -..+++.|.++||+|+.++..
T Consensus 4 ~~ilVt--GatG~i--G~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 4 KKIAIF--GATGQT--GLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CEEEEE--STTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEE--cCCcHH--HHHHHHHHHHCCCeEEEEEeC
Confidence 677665 444533 568899999999999999874
No 114
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=49.27 E-value=17 Score=29.05 Aligned_cols=33 Identities=15% Similarity=0.367 Sum_probs=25.8
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
+++|+++-.|..| ..+|+.|.++|++|+++...
T Consensus 19 ~~~v~IiG~G~iG-----~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 19 SKYIVIFGCGRLG-----SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEECCCHHH-----HHHHHHHHhCCCeEEEEECC
Confidence 5889988544333 56889999999999999764
No 115
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=49.18 E-value=16 Score=33.34 Aligned_cols=39 Identities=10% Similarity=0.131 Sum_probs=29.5
Q ss_pred cE-EEEEcCCCCCCh--------------HHHHHHHHHHHhCCCeEEEEeCCCC
Q 012563 15 RR-VILFPLPFQGHI--------------NPMLQLGSILYSKGFSITIIHTKFN 53 (460)
Q Consensus 15 ~~-il~~~~~~~GHv--------------~p~l~lA~~L~~rGh~V~~~~~~~~ 53 (460)
.| |++...|+.=.+ ....++|+++.++|++|++++.+..
T Consensus 37 k~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 37 RRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp CCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred CeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC
Confidence 44 666666664444 3678899999999999999998643
No 116
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=48.72 E-value=12 Score=32.94 Aligned_cols=39 Identities=26% Similarity=0.196 Sum_probs=33.4
Q ss_pred CCcEEEEEcCC---CCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 13 NGRRVILFPLP---FQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 13 ~~~~il~~~~~---~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.+||..|++.| +.|-=.-...++..|.+||++|+.+--+
T Consensus 21 ~~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiD 62 (294)
T 2c5m_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKID 62 (294)
T ss_dssp CCCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEE
T ss_pred eceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecC
Confidence 36999999988 5577788899999999999999997754
No 117
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=48.55 E-value=21 Score=32.67 Aligned_cols=35 Identities=14% Similarity=0.338 Sum_probs=28.9
Q ss_pred CCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 11 PRNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 11 ~~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
..+.|+|+|+-.|..| ..+|+.|+++||+|+++..
T Consensus 28 ~~~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 62 (320)
T 4dll_A 28 DPYARKITFLGTGSMG-----LPMARRLCEAGYALQVWNR 62 (320)
T ss_dssp -CCCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred ccCCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 3456899999888887 6789999999999998865
No 118
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=48.50 E-value=15 Score=31.82 Aligned_cols=142 Identities=13% Similarity=0.049 Sum_probs=74.2
Q ss_pred CCCeEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEECCCCCCCchhhccCchhHHhhh-CCCceEEeccchHHHhcc
Q 012563 271 APKSVIYVSFGSVAAINETEFLEIAWGLANSRVPFLWVVRPGLVDGVEWLEALPKGYLEMV-DGRGYIVQWAPQQQVLAH 349 (460)
Q Consensus 271 ~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~vp~~~lL~~ 349 (460)
.+++++.|..|.++ ...+..|.+.+..+.++..... +.+.+.. ..++.+....-....|..
T Consensus 30 ~gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~~~-----------~~l~~l~~~~~i~~i~~~~~~~dL~~ 91 (223)
T 3dfz_A 30 KGRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPTVS-----------AEINEWEAKGQLRVKRKKVGEEDLLN 91 (223)
T ss_dssp TTCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSSCC-----------HHHHHHHHTTSCEEECSCCCGGGSSS
T ss_pred CCCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCCCC-----------HHHHHHHHcCCcEEEECCCCHhHhCC
Confidence 46788888777644 3445666667888776543211 2222111 123333322222345667
Q ss_pred CCCcceeeccCchhhHHHHhh----CCCeeecCcccchhhHH-----HHHHHhhceeEeeCC----ccCHHHHHHHHHHH
Q 012563 350 PAVGGFLTHSGWNSTLESICE----GVPMICQPCLADQMVNA-----RYVSHVWRVGLHLEG----KLEKKEIETAIRRL 416 (460)
Q Consensus 350 ~~~~~~I~HGG~~s~~eal~~----GvP~v~~P~~~DQ~~na-----~~v~~~lG~G~~~~~----~~~~~~l~~~i~~l 416 (460)
+++ +|.--|.-.+.+.++. |+|+-+ .|.+..+ ..+.+. ++-+.+.. ..-+..|++.|..+
T Consensus 92 adL--VIaAT~d~~~N~~I~~~ak~gi~VNv----vD~p~~~~f~~Paiv~rg-~l~iaIST~G~sP~la~~iR~~ie~~ 164 (223)
T 3dfz_A 92 VFF--IVVATNDQAVNKFVKQHIKNDQLVNM----ASSFSDGNIQIPAQFSRG-RLSLAISTDGASPLLTKRIKEDLSSN 164 (223)
T ss_dssp CSE--EEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEEEET-TEEEEEECTTSCHHHHHHHHHHHHHH
T ss_pred CCE--EEECCCCHHHHHHHHHHHhCCCEEEE----eCCcccCeEEEeeEEEeC-CEEEEEECCCCCcHHHHHHHHHHHHH
Confidence 777 8888887666655554 445433 4444333 222332 44444433 23456677777777
Q ss_pred hccchHHHHHHHHHHHHHHHHH
Q 012563 417 MVEAEGQEMRERITCLKKNVDA 438 (460)
Q Consensus 417 l~~~~~~~~~~~a~~l~~~~~~ 438 (460)
+.. +...+-+.+.++++.+++
T Consensus 165 lp~-~~~~~~~~~~~~R~~vk~ 185 (223)
T 3dfz_A 165 YDE-SYTQYTQFLYECRVLIHR 185 (223)
T ss_dssp SCT-HHHHHHHHHHHHHHHHHH
T ss_pred ccH-HHHHHHHHHHHHHHHHHH
Confidence 743 234566677777777764
No 119
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=48.18 E-value=12 Score=29.17 Aligned_cols=33 Identities=12% Similarity=0.035 Sum_probs=25.6
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.+||+++-. |.+ ...+|+.|.++||+|+++-.+
T Consensus 6 ~~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECC
Confidence 457888764 443 568999999999999998763
No 120
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=48.09 E-value=18 Score=33.29 Aligned_cols=46 Identities=13% Similarity=0.042 Sum_probs=35.2
Q ss_pred cccCCCCCcEEEEEcC--CCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 012563 7 SRISPRNGRRVILFPL--PFQGHINPMLQLGSILYSKGFSITIIHTKF 52 (460)
Q Consensus 7 ~~~~~~~~~~il~~~~--~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~ 52 (460)
.-+...++|+++++.. |+-|-..-...||..|+++|++|.++..+.
T Consensus 5 ~~l~~~~gm~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 5 DLFKFNKGKTTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp GGCCCBTTBCEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred HhhcCCCCCeEEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 3445556644444433 477999999999999999999999999975
No 121
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=47.60 E-value=16 Score=27.43 Aligned_cols=44 Identities=14% Similarity=0.017 Sum_probs=29.7
Q ss_pred ccccCCCCCcEEEEEcCCCCCChHHHH-HHHHHHHhCCCe-EEEEe
Q 012563 6 ESRISPRNGRRVILFPLPFQGHINPML-QLGSILYSKGFS-ITIIH 49 (460)
Q Consensus 6 ~~~~~~~~~~~il~~~~~~~GHv~p~l-~lA~~L~~rGh~-V~~~~ 49 (460)
++.+...+.+||+++|..+.|+-.-+. .|-+.+.++|.+ +.+-.
T Consensus 10 ~~~~~~~~~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~~ 55 (110)
T 3czc_A 10 GQQMGRGSMVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESAS 55 (110)
T ss_dssp --------CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred cccccccCCcEEEEECCCcHHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 455666677899999999999998888 777888888987 55443
No 122
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=47.28 E-value=17 Score=30.91 Aligned_cols=41 Identities=15% Similarity=0.132 Sum_probs=31.5
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHh-CCCeEEEEeCCCCC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYS-KGFSITIIHTKFNS 54 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~-rGh~V~~~~~~~~~ 54 (460)
+++||++.-.|+.+=+. ...+.+.|.+ +|++|.++.++...
T Consensus 18 ~~k~IllgvTGsiaa~k-~~~lv~~L~~~~g~~V~vv~T~~A~ 59 (206)
T 1qzu_A 18 RKFHVLVGVTGSVAALK-LPLLVSKLLDIPGLEVAVVTTERAK 59 (206)
T ss_dssp SSEEEEEEECSSGGGGT-HHHHHHHHC---CEEEEEEECTGGG
T ss_pred CCCEEEEEEeChHHHHH-HHHHHHHHhcccCCEEEEEECHhHH
Confidence 45688888888887554 5999999999 89999999996433
No 123
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=46.96 E-value=13 Score=32.27 Aligned_cols=38 Identities=13% Similarity=-0.078 Sum_probs=33.3
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKF 52 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~ 52 (460)
|||+|..-|+-|=..-...||..|+++|++|.++=.+.
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 78888777788999999999999999999999987753
No 124
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=46.91 E-value=37 Score=28.96 Aligned_cols=102 Identities=5% Similarity=-0.007 Sum_probs=55.8
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCCCCCC---CCCCCceEEeCCC-CCCCCCCCCHHHHHHHHH
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSK--GFSITIIHTKFNSPNS---CNYPHFDFHSISD-GLTDPSAEDSTTILITLN 88 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~r--Gh~V~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 88 (460)
|||+++-+|+.+ -+.++.+.|.+. +|+|..+.+....... +...|+.+..++. .+. +.
T Consensus 4 ~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~~~~~-----~~-------- 67 (212)
T 3av3_A 4 KRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFSPKDYP-----SK-------- 67 (212)
T ss_dssp EEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECCGGGSS-----SH--------
T ss_pred cEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCccccc-----ch--------
Confidence 588888877644 366677788777 7899877764322111 1224566655442 111 00
Q ss_pred HhcchhHHHHHHHHhhcCCCCCCCCCCceEEEEcCcch-HHH-HHhhcCCCeEEEeCc
Q 012563 89 AKCMVPFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQ-FTH-VADEFKLPTIILQTH 144 (460)
Q Consensus 89 ~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~-~~~-~A~~lgiP~v~~~~~ 144 (460)
......+.+.++++ +||++|+-.+.. ... +-....-.++-+.++
T Consensus 68 ~~~~~~~~~~l~~~------------~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 68 AAFESEILRELKGR------------QIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp HHHHHHHHHHHHHT------------TCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred hhhHHHHHHHHHhc------------CCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 11111122333333 899999887642 222 555566667776665
No 125
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=46.57 E-value=12 Score=34.03 Aligned_cols=42 Identities=12% Similarity=0.177 Sum_probs=27.6
Q ss_pred cccccccCCCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 3 TKQESRISPRNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 3 ~~~~~~~~~~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
|..+|.|+. +-++|+|+-.|..|+ .+|..|+++||+|+++..
T Consensus 5 ~~~~~~~~~-~~~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~ 46 (302)
T 1f0y_A 5 TASASAKKI-IVKHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQ 46 (302)
T ss_dssp -------CC-CCCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred ccccccccc-cCCEEEEECCCHHHH-----HHHHHHHhCCCeEEEEEC
Confidence 455666753 335899998887775 688999999999998765
No 126
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=46.51 E-value=12 Score=35.27 Aligned_cols=31 Identities=23% Similarity=0.219 Sum_probs=25.8
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEe
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIH 49 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~ 49 (460)
.|||+|+-.|--| +.+|..|+++|++|+++=
T Consensus 1 sm~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~E 31 (412)
T 4hb9_A 1 SMHVGIIGAGIGG-----TCLAHGLRKHGIKVTIYE 31 (412)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEECcCHHH-----HHHHHHHHhCCCCEEEEe
Confidence 3899999766545 889999999999999983
No 127
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=46.41 E-value=22 Score=24.67 Aligned_cols=50 Identities=14% Similarity=0.071 Sum_probs=33.3
Q ss_pred hhCCCeeecCcccchhhH-HHHHHHh-hceeEeeCCccCHHHHHHHHHHHhc
Q 012563 369 CEGVPMICQPCLADQMVN-ARYVSHV-WRVGLHLEGKLEKKEIETAIRRLMV 418 (460)
Q Consensus 369 ~~GvP~v~~P~~~DQ~~n-a~~v~~~-lG~G~~~~~~~~~~~l~~~i~~ll~ 418 (460)
-.|+|++++-..+.|.+. -..-+.+ -|+.-.+-..-++++|.+.+++.|.
T Consensus 49 dngkplvvfvngasqndvnefqneakkegvsydvlkstdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVLKSTDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHhcCcchhhhccCCHHHHHHHHHHHHH
Confidence 368999998888888663 3333332 1444443336789999999988874
No 128
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=46.33 E-value=56 Score=27.64 Aligned_cols=45 Identities=9% Similarity=-0.101 Sum_probs=32.7
Q ss_pred hhhhhccCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCCEEE
Q 012563 263 SISWLDKQAPKSVIYVSFGSVAAINETEFLEIAWGLANSRVPFLW 307 (460)
Q Consensus 263 l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~ 307 (460)
+.+|+....++.++||..+|......+.+..+.++++++|..+.+
T Consensus 18 ~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~ 62 (206)
T 3l4e_A 18 FTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEE 62 (206)
T ss_dssp HHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEE
Confidence 455654445688999998886544456778899999999987554
No 129
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=46.18 E-value=60 Score=29.39 Aligned_cols=105 Identities=10% Similarity=0.140 Sum_probs=58.8
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCC-CCCCCCCCCCceEEeCCCCCCCCCCCCHHHHHHHHH
Q 012563 12 RNGRRVILFPLPFQGHINPMLQLGSILYSK--GFSITIIHTKF-NSPNSCNYPHFDFHSISDGLTDPSAEDSTTILITLN 88 (460)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~lA~~L~~r--Gh~V~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (460)
.+++||+++.++. || -+.+|.....+- +.+|..+.+.. .....+...|+.++.+|...... .
T Consensus 103 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~~gIp~~~~~~~~~~r-----~------- 167 (302)
T 3o1l_A 103 AQKKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQDLRSMVEWHDIPYYHVPVDPKDK-----E------- 167 (302)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHTTTCCEEECCCCSSCC-----H-------
T ss_pred CCCcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHHcCCCEEEcCCCcCCH-----H-------
Confidence 4578999988776 54 455666655432 46888777642 22222334578888776321100 0
Q ss_pred HhcchhHHHHHHHHhhcCCCCCCCCCCceEEEEcCcchHHH--HHhhcCCCeEEEeCc
Q 012563 89 AKCMVPFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQFTH--VADEFKLPTIILQTH 144 (460)
Q Consensus 89 ~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~~~~--~A~~lgiP~v~~~~~ 144 (460)
..+..+.+.++++ +||+||.-.+...-. +-..+.-.++-+.++
T Consensus 168 -~~~~~~~~~l~~~------------~~DliVlagym~IL~~~~l~~~~~~~INiHpS 212 (302)
T 3o1l_A 168 -PAFAEVSRLVGHH------------QADVVVLARYMQILPPQLCREYAHQVINIHHS 212 (302)
T ss_dssp -HHHHHHHHHHHHT------------TCSEEEESSCCSCCCTTHHHHTTTCEEEEESS
T ss_pred -HHHHHHHHHHHHh------------CCCEEEHhHhhhhcCHHHHhhhhCCeEEeCcc
Confidence 0111122333333 899999887653332 556666667776555
No 130
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=46.06 E-value=87 Score=28.09 Aligned_cols=105 Identities=10% Similarity=0.083 Sum_probs=59.6
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCC--CCCCCCCCCceEEeCCCCCCCCCCCCHHHHHHHH
Q 012563 12 RNGRRVILFPLPFQGHINPMLQLGSILYSK--GFSITIIHTKFN--SPNSCNYPHFDFHSISDGLTDPSAEDSTTILITL 87 (460)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~lA~~L~~r--Gh~V~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (460)
.+++||+++.++. || -+.+|.....+- ..+|..+.+... ....+...|+.++.+|.... .
T Consensus 86 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~~~a~~~~A~~~gIp~~~~~~~~~-------------~ 149 (287)
T 3nrb_A 86 TDRKKVVIMVSKF-DH--CLGDLLYRHRLGELDMEVVGIISNHPREALSVSLVGDIPFHYLPVTPA-------------T 149 (287)
T ss_dssp TCCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSCGGGCCCCCCTTSCEEECCCCGG-------------G
T ss_pred CCCcEEEEEEeCC-Cc--CHHHHHHHHHCCCCCeEEEEEEeCChHHHHHHHHHcCCCEEEEeccCc-------------c
Confidence 4578999988776 43 444555555433 357777766432 23334456888888773210 0
Q ss_pred HHhcchhHHHHHHHHhhcCCCCCCCCCCceEEEEcCcch-HHH-HHhhcCCCeEEEeCc
Q 012563 88 NAKCMVPFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQ-FTH-VADEFKLPTIILQTH 144 (460)
Q Consensus 88 ~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~-~~~-~A~~lgiP~v~~~~~ 144 (460)
+...+..+.+.+++. +||+||.-.+.. -.. +-..+.-.++-+.++
T Consensus 150 r~~~~~~~~~~l~~~------------~~Dlivlagym~il~~~~l~~~~~~~iNiHpS 196 (287)
T 3nrb_A 150 KAAQESQIKNIVTQS------------QADLIVLARYMQILSDDLSAFLSGRCINIHHS 196 (287)
T ss_dssp HHHHHHHHHHHHHHH------------TCSEEEESSCCSCCCHHHHHHHTTSEEEEESS
T ss_pred hhhHHHHHHHHHHHh------------CCCEEEhhhhhhhcCHHHHhhccCCeEEECcc
Confidence 111112233444444 899999887652 223 555566677776655
No 131
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=45.94 E-value=28 Score=26.00 Aligned_cols=38 Identities=13% Similarity=-0.009 Sum_probs=29.8
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+.|||+++|..+.|+-.-.-.+-+.+.++|.++.+-+.
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~~ 40 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEAI 40 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 34899999999999996666777788888987665443
No 132
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=45.54 E-value=17 Score=30.23 Aligned_cols=39 Identities=8% Similarity=-0.002 Sum_probs=31.2
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNS 54 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~ 54 (460)
+||++.-.|+.|=+ -...+.+.|.++|++|.++.++...
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~ 41 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSK 41 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGG
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHH
Confidence 36777777777666 6789999999999999999986433
No 133
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=45.15 E-value=19 Score=32.93 Aligned_cols=32 Identities=16% Similarity=0.175 Sum_probs=27.5
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
+|+|+++..+ -...+++++.++||+|+++...
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~ 33 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSS 33 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECC
Confidence 5899999876 5678999999999999998874
No 134
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=44.82 E-value=32 Score=29.11 Aligned_cols=34 Identities=21% Similarity=0.309 Sum_probs=26.4
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
..|+|+|+-.|..| ..+|..|.++||+|+++...
T Consensus 18 ~~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~~ 51 (209)
T 2raf_A 18 QGMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGSK 51 (209)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcCC
Confidence 36899999766665 67899999999999988653
No 135
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=44.48 E-value=16 Score=31.82 Aligned_cols=33 Identities=24% Similarity=0.242 Sum_probs=28.8
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
.+|+|.|+-.|..|- .||+.|+++||+|+.+..
T Consensus 5 ~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSS
T ss_pred CCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecC
Confidence 569999999999985 589999999999998766
No 136
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=43.86 E-value=46 Score=28.32 Aligned_cols=105 Identities=8% Similarity=0.010 Sum_probs=57.1
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCCCCC---CCCCCCceEEeCCC-CCCCCCCCCHHHHHH
Q 012563 12 RNGRRVILFPLPFQGHINPMLQLGSILYSK--GFSITIIHTKFNSPN---SCNYPHFDFHSISD-GLTDPSAEDSTTILI 85 (460)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~lA~~L~~r--Gh~V~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 85 (460)
+.++||+++.+|+.+- +.+|.+.+.+. .++|..+.++..... .+...|+.+..++. .+..
T Consensus 5 m~~~ri~vl~SG~gsn---l~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~gIp~~~~~~~~~~~----------- 70 (209)
T 4ds3_A 5 MKRNRVVIFISGGGSN---MEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAAGIATQVFKRKDFAS----------- 70 (209)
T ss_dssp -CCEEEEEEESSCCHH---HHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHTTCCEEECCGGGSSS-----------
T ss_pred CCCccEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHcCCCEEEeCccccCC-----------
Confidence 3477899888776443 55666666554 378888777432211 12234677766552 1110
Q ss_pred HHHHhcchhHHHHHHHHhhcCCCCCCCCCCceEEEEcCcchHH-H-HHhhcCCCeEEEeCc
Q 012563 86 TLNAKCMVPFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQFT-H-VADEFKLPTIILQTH 144 (460)
Q Consensus 86 ~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~~~-~-~A~~lgiP~v~~~~~ 144 (460)
+...+..+.+.++++ +||++|+-.+...- . +-....-.++-+.++
T Consensus 71 --r~~~d~~~~~~l~~~------------~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 117 (209)
T 4ds3_A 71 --KEAHEDAILAALDVL------------KPDIICLAGYMRLLSGRFIAPYEGRILNIHPS 117 (209)
T ss_dssp --HHHHHHHHHHHHHHH------------CCSEEEESSCCSCCCHHHHGGGTTCEEEEESS
T ss_pred --HHHHHHHHHHHHHhc------------CCCEEEEeccccCcCHHHHhhccCCeEEECCc
Confidence 011112233445555 89999988764222 2 555555567776555
No 137
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=43.74 E-value=23 Score=30.43 Aligned_cols=104 Identities=5% Similarity=0.043 Sum_probs=55.2
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHh-CCCeEEEEeCCCCCCC---CCCCCCceEEeCCC-CCCCCCCCCHHHHHHHH
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYS-KGFSITIIHTKFNSPN---SCNYPHFDFHSISD-GLTDPSAEDSTTILITL 87 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~-rGh~V~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 87 (460)
+++||+++.+|..+.+ .+|.+...+ .+++|..+.+...... .+...|+.+..++. .++. ..
T Consensus 4 ~~~riavl~SG~Gsnl---~all~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~gIp~~~~~~~~~~~-----r~------ 69 (215)
T 3tqr_A 4 EPLPIVVLISGNGTNL---QAIIGAIQKGLAIEIRAVISNRADAYGLKRAQQADIPTHIIPHEEFPS-----RT------ 69 (215)
T ss_dssp CCEEEEEEESSCCHHH---HHHHHHHHTTCSEEEEEEEESCTTCHHHHHHHHTTCCEEECCGGGSSS-----HH------
T ss_pred CCcEEEEEEeCCcHHH---HHHHHHHHcCCCCEEEEEEeCCcchHHHHHHHHcCCCEEEeCccccCc-----hh------
Confidence 4689998887765444 444455544 3688888877432211 12234677766652 1110 00
Q ss_pred HHhcchhHHHHHHHHhhcCCCCCCCCCCceEEEEcCcchH-HH-HHhhcCCCeEEEeCc
Q 012563 88 NAKCMVPFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQF-TH-VADEFKLPTIILQTH 144 (460)
Q Consensus 88 ~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~~-~~-~A~~lgiP~v~~~~~ 144 (460)
..+..+.+.++++ +||+||+-.+... .. +-....-.++-+.++
T Consensus 70 --~~d~~~~~~l~~~------------~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 70 --DFESTLQKTIDHY------------DPKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp --HHHHHHHHHHHTT------------CCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred --HhHHHHHHHHHhc------------CCCEEEEccchhhCCHHHHhhccCCeEEeCcc
Confidence 0111122233333 8999999876422 22 555555667776665
No 138
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=43.38 E-value=26 Score=30.25 Aligned_cols=37 Identities=8% Similarity=-0.057 Sum_probs=25.9
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 12 RNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
..+.+.++++.++.| --.++|+.|+++|++|+++...
T Consensus 4 ~~~~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 4 SGEARRVLVYGGRGA---LGSRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp --CCCEEEEETTTSH---HHHHHHHHHHTTTCEEEEEESS
T ss_pred cCCCCEEEEECCCcH---HHHHHHHHHHhCCCEEEEEeCC
Confidence 344556677754443 3578999999999999998763
No 139
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=43.37 E-value=17 Score=32.42 Aligned_cols=32 Identities=9% Similarity=0.028 Sum_probs=26.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
|||+|+-.|..| ..+|..|.++||+|+++...
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCCEEEEEcC
Confidence 688888777666 47899999999999998763
No 140
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=42.97 E-value=23 Score=32.57 Aligned_cols=34 Identities=15% Similarity=0.122 Sum_probs=28.6
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
..+||.|+-.+..| +..+|+.|.++||+|+..=.
T Consensus 3 ~~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 3 AMKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CCCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CCcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 35789999999888 66799999999999998644
No 141
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=42.67 E-value=48 Score=28.23 Aligned_cols=102 Identities=1% Similarity=-0.003 Sum_probs=56.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCCCCC---CCCCCCceEEeCCC-CCCCCCCCCHHHHHHHHH
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSK--GFSITIIHTKFNSPN---SCNYPHFDFHSISD-GLTDPSAEDSTTILITLN 88 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~r--Gh~V~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 88 (460)
|||+++.++..+ -+.+|.+.+.+. +|+|..+.+...... .+...|+.+..++. .+.. .
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~gIp~~~~~~~~~~~-----r-------- 64 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDS-----R-------- 64 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECCGGGCSS-----H--------
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHcCCcEEEeCcccccc-----h--------
Confidence 578888866554 367777777765 688887776432221 12235677766542 1110 0
Q ss_pred HhcchhHHHHHHHHhhcCCCCCCCCCCceEEEEcCcch-HHH-HHhhcCCCeEEEeCc
Q 012563 89 AKCMVPFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQ-FTH-VADEFKLPTIILQTH 144 (460)
Q Consensus 89 ~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~-~~~-~A~~lgiP~v~~~~~ 144 (460)
..... +.++.+.+. +||+||+-.+.. ... +-......++-+.++
T Consensus 65 ~~~~~---~~~~~l~~~---------~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 110 (212)
T 1jkx_A 65 EAYDR---ELIHEIDMY---------APDVVVLAGFMRILSPAFVSHYAGRLLNIHPS 110 (212)
T ss_dssp HHHHH---HHHHHHGGG---------CCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred hhccH---HHHHHHHhc---------CCCEEEEeChhhhCCHHHHhhccCCEEEEccC
Confidence 11111 122333322 899999887642 222 555566677776665
No 142
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=42.09 E-value=17 Score=34.07 Aligned_cols=40 Identities=13% Similarity=0.148 Sum_probs=29.4
Q ss_pred ccccCCCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 6 ESRISPRNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 6 ~~~~~~~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
..+|+ ...|||.|+-.|..| ..+|..|+++||+|++...+
T Consensus 22 ~~~m~-~~~mkI~VIGaG~mG-----~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 22 SNAME-PFKHPIAILGAGSWG-----TALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp ------CCCSCEEEECCSHHH-----HHHHHHHHTTTCCEEEECSC
T ss_pred hhccc-ccCCeEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 33444 346899999988777 46899999999999998874
No 143
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=41.75 E-value=9.9 Score=34.05 Aligned_cols=52 Identities=12% Similarity=0.162 Sum_probs=35.6
Q ss_pred CCCcceeeccCchhhHHHHhh------CCCeeecCcccchhhHHHHHHHhhceeEeeCCccCHHHHHHHHHHHhcc
Q 012563 350 PAVGGFLTHSGWNSTLESICE------GVPMICQPCLADQMVNARYVSHVWRVGLHLEGKLEKKEIETAIRRLMVE 419 (460)
Q Consensus 350 ~~~~~~I~HGG~~s~~eal~~------GvP~v~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~l~~~i~~ll~~ 419 (460)
+++ +|.=||-||+++++.. ++|++.+|... +|. +. .+.++++.+++.++++.
T Consensus 36 ~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G~------------lgf---l~-~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 36 PEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHTGH------------LGF---YA-DWRPAEADKLVKLLAKG 93 (272)
T ss_dssp CSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEESSS------------CCS---SC-CBCGGGHHHHHHHHHTT
T ss_pred CCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCCC------------CCc---CC-cCCHHHHHHHHHHHHcC
Confidence 355 9999999999999875 88999987621 121 11 34566666677666654
No 144
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=41.58 E-value=99 Score=27.72 Aligned_cols=105 Identities=10% Similarity=0.078 Sum_probs=58.9
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCC--CCCCCCCCCCceEEeCCCCCCCCCCCCHHHHHHHH
Q 012563 12 RNGRRVILFPLPFQGHINPMLQLGSILYSK--GFSITIIHTKF--NSPNSCNYPHFDFHSISDGLTDPSAEDSTTILITL 87 (460)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~lA~~L~~r--Gh~V~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (460)
.+++||+++.++. || -+.+|.....+- ..+|..+.+.. .....+...|+.++.+|.... +.
T Consensus 87 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~p~~~~~~A~~~gIp~~~~~~~~~-----~r------- 151 (288)
T 3obi_A 87 ETRRKVMLLVSQS-DH--CLADILYRWRVGDLHMIPTAIVSNHPRETFSGFDFGDIPFYHFPVNKD-----TR------- 151 (288)
T ss_dssp TSCEEEEEEECSC-CH--HHHHHHHHHHTTSSCEEEEEEEESSCGGGSCCTTTTTCCEEECCCCTT-----TH-------
T ss_pred CCCcEEEEEEcCC-CC--CHHHHHHHHHCCCCCeEEEEEEcCCChhHHHHHHHcCCCEEEeCCCcc-----cH-------
Confidence 4578999888766 44 344555554332 24777766543 233344456888888874211 00
Q ss_pred HHhcchhHHHHHHHHhhcCCCCCCCCCCceEEEEcCcch-HHH-HHhhcCCCeEEEeCc
Q 012563 88 NAKCMVPFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQ-FTH-VADEFKLPTIILQTH 144 (460)
Q Consensus 88 ~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~-~~~-~A~~lgiP~v~~~~~ 144 (460)
...+..+.+.++++ +||+||.-.+.. -.. +-..+.-.++-+.++
T Consensus 152 -~~~~~~~~~~l~~~------------~~Dlivlagy~~il~~~~l~~~~~~~iNiHpS 197 (288)
T 3obi_A 152 -RQQEAAITALIAQT------------HTDLVVLARYMQILSDEMSARLAGRCINIHHS 197 (288)
T ss_dssp -HHHHHHHHHHHHHH------------TCCEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred -HHHHHHHHHHHHhc------------CCCEEEhhhhhhhCCHHHHhhhcCCeEEeCcc
Confidence 11112233444444 899999887652 223 555565667766554
No 145
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=41.45 E-value=22 Score=30.70 Aligned_cols=29 Identities=17% Similarity=0.090 Sum_probs=24.3
Q ss_pred CCCcceeeccCchhhHHHHhhCCCeeecCccc
Q 012563 350 PAVGGFLTHSGWNSTLESICEGVPMICQPCLA 381 (460)
Q Consensus 350 ~~~~~~I~HGG~~s~~eal~~GvP~v~~P~~~ 381 (460)
+++ +|+.||.......- .++|+|-++..+
T Consensus 64 ~dV--IISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 64 CDA--IIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp CSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CeE--EEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 555 99999999888875 589999999853
No 146
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=41.11 E-value=36 Score=26.30 Aligned_cols=37 Identities=11% Similarity=0.066 Sum_probs=26.1
Q ss_pred cEEE-EEcCCCCC--ChHHHHHHHHHHHhCCCeE-EEEeCC
Q 012563 15 RRVI-LFPLPFQG--HINPMLQLGSILYSKGFSI-TIIHTK 51 (460)
Q Consensus 15 ~~il-~~~~~~~G--Hv~p~l~lA~~L~~rGh~V-~~~~~~ 51 (460)
|+++ +++.+.+| .....+.+|..+.+.||+| .++-..
T Consensus 1 mk~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~ 41 (130)
T 2hy5_A 1 MKFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYH 41 (130)
T ss_dssp CEEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred CEEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEec
Confidence 3444 34444444 4567899999999999999 887764
No 147
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=41.09 E-value=47 Score=31.06 Aligned_cols=42 Identities=12% Similarity=0.119 Sum_probs=31.6
Q ss_pred ccccccCCCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 4 KQESRISPRNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 4 ~~~~~~~~~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.++.||+. ++|+|+++..+ .-...+++++.+.|++|+.+...
T Consensus 2 ~~~~pm~~-~~~~ili~g~g-----~~~~~~~~a~~~~G~~v~~~~~~ 43 (391)
T 1kjq_A 2 LLGTALRP-AATRVMLLGSG-----ELGKEVAIECQRLGVEVIAVDRY 43 (391)
T ss_dssp CBCCTTST-TCCEEEEESCS-----HHHHHHHHHHHTTTCEEEEEESS
T ss_pred CcCCCCCC-CCCEEEEECCC-----HHHHHHHHHHHHcCCEEEEEECC
Confidence 35677774 56899999543 24578899999999999888764
No 148
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=41.03 E-value=22 Score=32.43 Aligned_cols=32 Identities=16% Similarity=0.267 Sum_probs=27.2
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
|||+|+-.|+.|- .+|..|+++||+|+++...
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcC
Confidence 7899999998884 5788999999999999874
No 149
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=40.84 E-value=29 Score=34.75 Aligned_cols=40 Identities=10% Similarity=0.130 Sum_probs=37.0
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 12 RNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.++.+|++.+.++-.|-....-++..|..+|++|+.++..
T Consensus 96 ~~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~ 135 (579)
T 3bul_A 96 KTNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVM 135 (579)
T ss_dssp CCSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSS
T ss_pred CCCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCC
Confidence 3578999999999999999999999999999999999875
No 150
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=40.75 E-value=19 Score=32.55 Aligned_cols=32 Identities=22% Similarity=0.331 Sum_probs=26.1
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
.|+|+|+-.|..| ..+|..|.++||+|+++..
T Consensus 3 ~m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 3 AMKIAIAGAGAMG-----SRLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECcCHHH-----HHHHHHHHhCCCcEEEEEC
Confidence 4899999776666 4678999999999999876
No 151
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=40.68 E-value=39 Score=26.58 Aligned_cols=34 Identities=9% Similarity=0.064 Sum_probs=28.7
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEE
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITII 48 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~ 48 (460)
+..+++++..|+ =+-|++++++.|.++|.+|+++
T Consensus 17 ~~~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~ 50 (142)
T 3lyu_A 17 KFGKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL 50 (142)
T ss_dssp CCSEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE
Confidence 456888888554 3899999999999999999998
No 152
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=40.45 E-value=20 Score=32.86 Aligned_cols=32 Identities=13% Similarity=0.310 Sum_probs=27.7
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
|||+|+-.|+.| ..+|..|++.||+|+++...
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIG-----SFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHTTCEEEEECST
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 899999888877 46788999999999999874
No 153
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=40.33 E-value=1.5e+02 Score=24.02 Aligned_cols=139 Identities=12% Similarity=0.168 Sum_probs=77.3
Q ss_pred eEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEECCCCCCCchhhccCchhHHhhhCCCceEEeccchHHHhccCCCc
Q 012563 274 SVIYVSFGSVAAINETEFLEIAWGLANSRVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPAVG 353 (460)
Q Consensus 274 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~~~ 353 (460)
+.|-|-+||.. +....+.....++..+.++-..+... ...|+.+.+.. . =.....++
T Consensus 4 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa--------HR~p~~~~~~~----------~---~a~~~g~~ 60 (163)
T 3ors_A 4 MKVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVSA--------HRTPKMMVQFA----------S---EARERGIN 60 (163)
T ss_dssp CCEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTSHHHHHHHH----------H---HTTTTTCC
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEECC--------cCCHHHHHHHH----------H---HHHhCCCc
Confidence 44666677765 45667788888888888765555443 23555552111 0 01111233
Q ss_pred ceeeccCchhhHHHHh---hCCCeeecCcccchh--hHH-HHHHHhh--ce--eEe-eC--CccCHHHHHHHHHHHhccc
Q 012563 354 GFLTHSGWNSTLESIC---EGVPMICQPCLADQM--VNA-RYVSHVW--RV--GLH-LE--GKLEKKEIETAIRRLMVEA 420 (460)
Q Consensus 354 ~~I~HGG~~s~~eal~---~GvP~v~~P~~~DQ~--~na-~~v~~~l--G~--G~~-~~--~~~~~~~l~~~i~~ll~~~ 420 (460)
++|.=+|...-+-++. .-+|+|.+|....-. ..+ --+.+ + |+ +.. ++ ...+...++..|-. +.|
T Consensus 61 ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vq-mp~GvPVatV~I~~a~~~nAa~lAa~Il~-~~d- 137 (163)
T 3ors_A 61 IIIAGAGGAAHLPGMVASLTTLPVIGVPIETKSLKGIDSLLSIVQ-MPGGIPVATTAIGAAGAKNAGILAARMLS-IQN- 137 (163)
T ss_dssp EEEEEEESSCCHHHHHHHHCSSCEEEEEECCTTTTTHHHHHHHHT-CCTTSCCEECCSTHHHHHHHHHHHHHHHH-TTC-
T ss_pred EEEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCCHHHHHHHhh-CCCCCceEEEEcCCcccHHHHHHHHHHHh-CCC-
Confidence 4888877543333332 557999999864311 111 11222 2 44 322 22 13455566655543 345
Q ss_pred hHHHHHHHHHHHHHHHHHHH
Q 012563 421 EGQEMRERITCLKKNVDACL 440 (460)
Q Consensus 421 ~~~~~~~~a~~l~~~~~~~~ 440 (460)
..++++.+.+++.+++.+
T Consensus 138 --~~l~~kl~~~r~~~~~~v 155 (163)
T 3ors_A 138 --PSLVEKLNQYESSLIQKV 155 (163)
T ss_dssp --THHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHHH
Confidence 689999999998888543
No 154
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=40.27 E-value=18 Score=33.14 Aligned_cols=31 Identities=23% Similarity=0.401 Sum_probs=26.0
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEE
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITII 48 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~ 48 (460)
.+|||+|+-.|+.| ..+|..|++.||+|+++
T Consensus 18 ~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~ 48 (318)
T 3hwr_A 18 QGMKVAIMGAGAVG-----CYYGGMLARAGHEVILI 48 (318)
T ss_dssp --CEEEEESCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEE
Confidence 46899999888877 56789999999999999
No 155
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=40.24 E-value=19 Score=28.13 Aligned_cols=33 Identities=21% Similarity=0.296 Sum_probs=27.0
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
+.||+++-.|..| ..+|+.|.++||+|+++..+
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 5689988765444 58899999999999999874
No 156
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=40.22 E-value=63 Score=29.59 Aligned_cols=68 Identities=13% Similarity=-0.054 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHhCCCCEEEEECCCCCCCchhhccCchhHHhhhCCCceEEeccchHHHhccCCCcceeeccCchhhHHHH
Q 012563 289 TEFLEIAWGLANSRVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPAVGGFLTHSGWNSTLESI 368 (460)
Q Consensus 289 ~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~~s~~eal 368 (460)
+.+..+...+.+.+..+.+........ ...+ -...+...+++ +|.=||-||+.|++
T Consensus 44 ~~~~~i~~~l~~~g~~~~~~~t~~~~~--------~~~~--------------~~~~~~~~~d~--vvv~GGDGTl~~v~ 99 (332)
T 2bon_A 44 LPLREAIMLLREEGMTIHVRVTWEKGD--------AARY--------------VEEARKFGVAT--VIAGGGDGTINEVS 99 (332)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECCSTTH--------HHHH--------------HHHHHHHTCSE--EEEEESHHHHHHHH
T ss_pred chHHHHHHHHHHcCCcEEEEEecCcch--------HHHH--------------HHHHHhcCCCE--EEEEccchHHHHHH
Confidence 456678888888787776654332100 0111 01112234556 99999999999985
Q ss_pred h--------hCCCeeecCcc
Q 012563 369 C--------EGVPMICQPCL 380 (460)
Q Consensus 369 ~--------~GvP~v~~P~~ 380 (460)
. .++|+.++|..
T Consensus 100 ~~l~~~~~~~~~plgiiP~G 119 (332)
T 2bon_A 100 TALIQCEGDDIPALGILPLG 119 (332)
T ss_dssp HHHHHCCSSCCCEEEEEECS
T ss_pred HHHhhcccCCCCeEEEecCc
Confidence 3 57899999983
No 157
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=39.98 E-value=28 Score=31.84 Aligned_cols=43 Identities=14% Similarity=0.202 Sum_probs=25.3
Q ss_pred cccccCCCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 5 QESRISPRNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 5 ~~~~~~~~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
+.+.++..+.|+|+|. |+.|-+ -..|++.|.++||+|+.+...
T Consensus 18 ~~~~~~~~~~~~vlVt--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 60 (343)
T 2b69_A 18 YFQGHMEKDRKRILIT--GGAGFV--GSHLTDKLMMDGHEVTVVDNF 60 (343)
T ss_dssp ---------CCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEECC
T ss_pred ccccccccCCCEEEEE--cCccHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 3444455566777665 444544 467889999999999998863
No 158
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=39.92 E-value=8.5 Score=37.54 Aligned_cols=34 Identities=24% Similarity=0.293 Sum_probs=28.5
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
+.|||+++-.|-.| ..||+.|.+.||+|+++=.+
T Consensus 2 ~~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 2 NAMKIIILGAGQVG-----GTLAENLVGENNDITIVDKD 35 (461)
T ss_dssp CCEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEESC
T ss_pred CcCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 67999999877655 46999999999999999764
No 159
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=39.90 E-value=24 Score=32.82 Aligned_cols=63 Identities=10% Similarity=0.190 Sum_probs=33.4
Q ss_pred cccccccCCCCCcEEEEEcCCCCCChHHHHHHHHHHHhC-CCeEEEEeCCCCCC-CCCCCCCceEEeCC
Q 012563 3 TKQESRISPRNGRRVILFPLPFQGHINPMLQLGSILYSK-GFSITIIHTKFNSP-NSCNYPHFDFHSIS 69 (460)
Q Consensus 3 ~~~~~~~~~~~~~~il~~~~~~~GHv~p~l~lA~~L~~r-Gh~V~~~~~~~~~~-~~~~~~~~~~~~~~ 69 (460)
+.++++|...+.|+|+|+ |+.|.+- ..|++.|.++ ||+|+.++...... ......+++++...
T Consensus 13 ~~~~~~~~~m~~~~vlVt--GatG~iG--~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~D 77 (372)
T 3slg_A 13 EAQTQGPGSMKAKKVLIL--GVNGFIG--HHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGD 77 (372)
T ss_dssp ----------CCCEEEEE--SCSSHHH--HHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECC
T ss_pred hhhhcCCcccCCCEEEEE--CCCChHH--HHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCc
Confidence 346677777777887765 4555443 5788999998 99999998742211 11112466666543
No 160
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=39.80 E-value=99 Score=23.11 Aligned_cols=38 Identities=11% Similarity=0.109 Sum_probs=30.2
Q ss_pred CCcEEEEEcCCCCCChHH-HHHHHHHHHhCCCeEEEEeC
Q 012563 13 NGRRVILFPLPFQGHINP-MLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p-~l~lA~~L~~rGh~V~~~~~ 50 (460)
+.+||+++|..+.|.-.- ...|-+.+.+.|.++.+-..
T Consensus 20 ~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~~ 58 (113)
T 1tvm_A 20 SKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQC 58 (113)
T ss_dssp SSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred cccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEEe
Confidence 356899999999999885 67777888889998755443
No 161
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=39.76 E-value=33 Score=30.38 Aligned_cols=47 Identities=13% Similarity=0.119 Sum_probs=31.8
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNSPNSCNYPHFDFHSIS 69 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~ 69 (460)
.|+|++. |+ | .=-..|++.|.++||+|+.++..... . ..+++++...
T Consensus 3 ~~~ilVt--Ga-G--~iG~~l~~~L~~~g~~V~~~~r~~~~--~--~~~~~~~~~D 49 (286)
T 3gpi_A 3 LSKILIA--GC-G--DLGLELARRLTAQGHEVTGLRRSAQP--M--PAGVQTLIAD 49 (286)
T ss_dssp CCCEEEE--CC-S--HHHHHHHHHHHHTTCCEEEEECTTSC--C--CTTCCEEECC
T ss_pred CCcEEEE--CC-C--HHHHHHHHHHHHCCCEEEEEeCCccc--c--ccCCceEEcc
Confidence 4677777 34 6 34567899999999999999874221 1 2456666543
No 162
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=39.76 E-value=45 Score=28.01 Aligned_cols=38 Identities=11% Similarity=0.083 Sum_probs=31.9
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
++..++++.++..|+-.-...+++.|+++|+.|..+-.
T Consensus 30 ~~~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 30 GPLPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp SCEEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCCCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 34568888888888888899999999999998877654
No 163
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=39.52 E-value=1.5e+02 Score=23.84 Aligned_cols=133 Identities=12% Similarity=0.099 Sum_probs=74.8
Q ss_pred EEEEecccccCCHHHHHHHHHHHHhCCCCEEEEECCCCCCCchhhccCchhHHhhhCCCceEEeccchHHHhccCCCcce
Q 012563 276 IYVSFGSVAAINETEFLEIAWGLANSRVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPAVGGF 355 (460)
Q Consensus 276 v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~ 355 (460)
|-|-+||.. +-...+.....++..+.++-..+... ...|+.+. ++.....-+++
T Consensus 2 V~Iimgs~S--D~~v~~~a~~~l~~~gi~~dv~V~sa--------HR~p~~~~----------------~~~~~a~~~Vi 55 (157)
T 2ywx_A 2 ICIIMGSES--DLKIAEKAVNILKEFGVEFEVRVASA--------HRTPELVE----------------EIVKNSKADVF 55 (157)
T ss_dssp EEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTCHHHHH----------------HHHHHCCCSEE
T ss_pred EEEEEccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc--------cCCHHHHH----------------HHHHhcCCCEE
Confidence 344566655 45667778888888888765555432 23555552 11221111338
Q ss_pred eeccCchhhHHHHhh---CCCeeecCcccchhhHHHH--HHHhh--cee--Eee-CCccCHHHHHHHHHHHhccchHHHH
Q 012563 356 LTHSGWNSTLESICE---GVPMICQPCLADQMVNARY--VSHVW--RVG--LHL-EGKLEKKEIETAIRRLMVEAEGQEM 425 (460)
Q Consensus 356 I~HGG~~s~~eal~~---GvP~v~~P~~~DQ~~na~~--v~~~l--G~G--~~~-~~~~~~~~l~~~i~~ll~~~~~~~~ 425 (460)
|.=.|.-.-+-++.+ -+|+|.+|....-...... +.+ + |+. ..- +...+...++..|- -+.| ..+
T Consensus 56 Ia~AG~aa~Lpgvva~~t~~PVIgVP~~~~l~G~daLlS~vq-mP~gvpVatV~I~~~~nAa~lA~~Il-~~~d---~~l 130 (157)
T 2ywx_A 56 IAIAGLAAHLPGVVASLTTKPVIAVPVDAKLDGLDALLSSVQ-MPPGIPVATVGIDRGENAAILALEIL-ALKD---ENI 130 (157)
T ss_dssp EEEEESSCCHHHHHHTTCSSCEEEEEECSSGGGHHHHHHHHS-CCTTSCCEECCTTCHHHHHHHHHHHH-TTTC---HHH
T ss_pred EEEcCchhhhHHHHHhccCCCEEEecCCCccCcHHHHHHHhc-CCCCCeeEEEecCCcHHHHHHHHHHH-hcCC---HHH
Confidence 887776544444444 4699999993221111222 223 2 433 222 22456666666664 4456 789
Q ss_pred HHHHHHHHHHHHHH
Q 012563 426 RERITCLKKNVDAC 439 (460)
Q Consensus 426 ~~~a~~l~~~~~~~ 439 (460)
+++.+.+++++++.
T Consensus 131 ~~kl~~~r~~~~~~ 144 (157)
T 2ywx_A 131 AKKLIEYREKMKKK 144 (157)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999888854
No 164
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=39.51 E-value=33 Score=29.32 Aligned_cols=34 Identities=12% Similarity=0.156 Sum_probs=26.3
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+||+++++.++.| --.++|+.|+++|++|+++..
T Consensus 1 ~~k~vlITGas~g---IG~~ia~~l~~~G~~V~~~~r 34 (235)
T 3l77_A 1 EMKVAVITGASRG---IGEAIARALARDGYALALGAR 34 (235)
T ss_dssp CCCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 3677888865543 357899999999999988875
No 165
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=39.38 E-value=26 Score=26.29 Aligned_cols=40 Identities=3% Similarity=-0.128 Sum_probs=28.3
Q ss_pred CCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 11 PRNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 11 ~~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
..++|||+++|..+.+--.-.-.+=+...++|.+|.+...
T Consensus 3 ~~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a~ 42 (108)
T 3nbm_A 3 ASKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANSG 42 (108)
T ss_dssp --CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred cccCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEc
Confidence 4578999999998876555455555666667999888663
No 166
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=39.37 E-value=34 Score=31.09 Aligned_cols=40 Identities=8% Similarity=-0.076 Sum_probs=30.9
Q ss_pred CCCcEEEEEcCCCCCC----hHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 12 RNGRRVILFPLPFQGH----INPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 12 ~~~~~il~~~~~~~GH----v~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
..++||+++..|..+- +.-...++++|.+.||+|+.+.+.
T Consensus 11 ~~~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~ 54 (317)
T 4eg0_A 11 KRFGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPA 54 (317)
T ss_dssp GGGCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred hhcceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3478999999664332 346789999999999999999853
No 167
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=38.40 E-value=22 Score=32.86 Aligned_cols=32 Identities=19% Similarity=0.179 Sum_probs=26.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
.|||+|+-.|..| ..+|..|.++||+|+++..
T Consensus 4 ~mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 4 SKTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred cCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 4899999877666 4578889999999998865
No 168
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=38.33 E-value=1.6e+02 Score=23.98 Aligned_cols=142 Identities=13% Similarity=0.187 Sum_probs=80.0
Q ss_pred CCeEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEECCCCCCCchhhccCchhHHhhhCCCceEEeccchHHHhccCC
Q 012563 272 PKSVIYVSFGSVAAINETEFLEIAWGLANSRVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPA 351 (460)
Q Consensus 272 ~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~ 351 (460)
..|.|-|-+||.. +-...+.....++..+..+-..+... ...|+.+.+ |+.. .....
T Consensus 11 ~~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~sa--------HR~p~~l~~----------~~~~---a~~~g 67 (173)
T 4grd_A 11 SAPLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSA--------HRMPDEMFD----------YAEK---ARERG 67 (173)
T ss_dssp SSCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTSHHHHHH----------HHHH---HTTTT
T ss_pred CCCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEcc--------ccCHHHHHH----------HHHH---HHhcC
Confidence 4566777888866 45677888888998888765555443 235555521 1111 11123
Q ss_pred CcceeeccCch----hhHHHHhhCCCeeecCcccchh--hHH-HHHHHhh--ceeEe--eCC---ccCHHHHHHHHHHHh
Q 012563 352 VGGFLTHSGWN----STLESICEGVPMICQPCLADQM--VNA-RYVSHVW--RVGLH--LEG---KLEKKEIETAIRRLM 417 (460)
Q Consensus 352 ~~~~I~HGG~~----s~~eal~~GvP~v~~P~~~DQ~--~na-~~v~~~l--G~G~~--~~~---~~~~~~l~~~i~~ll 417 (460)
++++|.=.|.- ++..+ ..-+|+|.+|....-. ..+ .-+.+ + |+.+. .-. ..+..-++..|- -+
T Consensus 68 ~~ViIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSivq-MP~Gvpvatv~i~~~~a~NAallA~~IL-a~ 144 (173)
T 4grd_A 68 LRAIIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIVQ-MPKGVPVATFAIGEAGAANAALFAVSIL-SG 144 (173)
T ss_dssp CSEEEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHHC-CCTTSCCEECCSSHHHHHHHHHHHHHHH-TT
T ss_pred CeEEEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHHh-CCCCCCceEEecCCcchHHHHHHHHHHH-cC
Confidence 34477766643 33333 3468999999854321 111 22223 2 43332 211 234444544442 35
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHhc
Q 012563 418 VEAEGQEMRERITCLKKNVDACLRQ 442 (460)
Q Consensus 418 ~~~~~~~~~~~a~~l~~~~~~~~~~ 442 (460)
+| +.++++.+++++++++.+.+
T Consensus 145 ~d---~~l~~kl~~~r~~~~~~v~~ 166 (173)
T 4grd_A 145 NS---VDYANRLAAFRVRQNEAAHA 166 (173)
T ss_dssp SC---HHHHHHHHHHHHHHHHHHHH
T ss_pred CC---HHHHHHHHHHHHHHHHHHHc
Confidence 56 78999999999998865543
No 169
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=38.27 E-value=14 Score=33.78 Aligned_cols=32 Identities=13% Similarity=0.087 Sum_probs=24.5
Q ss_pred HhccCCCcceeeccCchhhHHHHhh----CCCeeecCc
Q 012563 346 VLAHPAVGGFLTHSGWNSTLESICE----GVPMICQPC 379 (460)
Q Consensus 346 lL~~~~~~~~I~HGG~~s~~eal~~----GvP~v~~P~ 379 (460)
....+++ +|.-||-||+++++.. ++|++.++.
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 3345666 9999999999999865 899999875
No 170
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=38.24 E-value=2e+02 Score=28.29 Aligned_cols=33 Identities=21% Similarity=0.266 Sum_probs=24.9
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
..|++|+. .-.-.+.|++.|.+-|.+|+.+.+.
T Consensus 364 GKrvaI~g-----d~~~~~~la~fL~elGm~vv~v~~~ 396 (523)
T 3u7q_B 364 GKRFALWG-----DPDFVMGLVKFLLELGCEPVHILCH 396 (523)
T ss_dssp TCEEEEEC-----SHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHcCCEEEEEEeC
Confidence 46788773 3445678888888999999988874
No 171
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=38.22 E-value=37 Score=29.01 Aligned_cols=38 Identities=24% Similarity=0.195 Sum_probs=25.6
Q ss_pred CCCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 10 SPRNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 10 ~~~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
..-+.|+|+|. |+.|.+ -..++++|.++||+|+.++..
T Consensus 17 ~~l~~~~ilVt--GatG~i--G~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 17 LYFQGMRVLVV--GANGKV--ARYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp ----CCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred cCcCCCeEEEE--CCCChH--HHHHHHHHHhCCCeEEEEECC
Confidence 33456777666 344443 457899999999999999874
No 172
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=38.22 E-value=24 Score=29.65 Aligned_cols=33 Identities=12% Similarity=0.124 Sum_probs=24.8
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
|||+++ |+.|.+ -..|+++|.++||+|+.++..
T Consensus 1 MkvlVt--GatG~i--G~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGII--GATGRA--GSRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEE--cCCchh--HHHHHHHHHhCCCEEEEEEcC
Confidence 676655 444544 368899999999999999874
No 173
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=38.19 E-value=34 Score=28.86 Aligned_cols=49 Identities=12% Similarity=0.116 Sum_probs=30.8
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNSPNSCNYPHFDFHSIS 69 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~ 69 (460)
|+|++. |+.|-+ -..++++|.++||+|+.++..... . ....+++++...
T Consensus 1 M~ilIt--GatG~i--G~~l~~~L~~~g~~V~~~~R~~~~-~-~~~~~~~~~~~D 49 (219)
T 3dqp_A 1 MKIFIV--GSTGRV--GKSLLKSLSTTDYQIYAGARKVEQ-V-PQYNNVKAVHFD 49 (219)
T ss_dssp CEEEEE--STTSHH--HHHHHHHHTTSSCEEEEEESSGGG-S-CCCTTEEEEECC
T ss_pred CeEEEE--CCCCHH--HHHHHHHHHHCCCEEEEEECCccc-h-hhcCCceEEEec
Confidence 676655 344433 368899999999999999874221 1 112456665543
No 174
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=37.68 E-value=23 Score=32.56 Aligned_cols=32 Identities=13% Similarity=0.152 Sum_probs=27.8
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
.|||.|+-.|..| ..+|..|.+.||+|+++..
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r 45 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWAR 45 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 5899999888777 5789999999999999876
No 175
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=37.60 E-value=2.7e+02 Score=26.43 Aligned_cols=139 Identities=14% Similarity=0.092 Sum_probs=75.3
Q ss_pred CCeEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEECCCCCCCchhhccCchhHHhhhCCCceEEeccchHHHhccC-
Q 012563 272 PKSVIYVSFGSVAAINETEFLEIAWGLANSRVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHP- 350 (460)
Q Consensus 272 ~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~- 350 (460)
..+.|-|-+||.. +-.........++..+.++-..+.+. ...|+.+.+ ++.+.. -...
T Consensus 264 ~~~~V~Ii~gs~S--D~~~~~~a~~~l~~~gi~~~v~V~sa--------HR~p~~~~~----------~~~~~~-~~g~~ 322 (425)
T 2h31_A 264 SQCRVVVLMGSTS--DLGHCEKIKKACGNFGIPCELRVTSA--------HKGPDETLR----------IKAEYE-GDGIP 322 (425)
T ss_dssp CCCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTCHHHHHH----------HHHHHH-TTCCC
T ss_pred CCCeEEEEecCcc--cHHHHHHHHHHHHHcCCceEEeeeec--------cCCHHHHHH----------HHHHHH-HCCCC
Confidence 3456777778766 45667778888888888765555443 235555421 111100 0112
Q ss_pred CCcceeeccCch----hhHHHHhhCCCeeecCcccchhhHHHHHH--H--hhceeEeeCC-ccCHHHHHHHHHHHhccch
Q 012563 351 AVGGFLTHSGWN----STLESICEGVPMICQPCLADQMVNARYVS--H--VWRVGLHLEG-KLEKKEIETAIRRLMVEAE 421 (460)
Q Consensus 351 ~~~~~I~HGG~~----s~~eal~~GvP~v~~P~~~DQ~~na~~v~--~--~lG~G~~~~~-~~~~~~l~~~i~~ll~~~~ 421 (460)
.+ +|.=+|.. ++..++ .-+|+|.+|....-......+. + . |+.+..-. ..++..++..|- -+.|
T Consensus 323 ~v--iIa~AG~~a~Lpgvva~~-t~~PVIgvP~~~~~~G~daLls~vqmp~-g~pvatv~~~~nAa~~A~~Il-~~~~-- 395 (425)
T 2h31_A 323 TV--FVAVAGRSNGLGPVMSGN-TAYPVISCPPLTPDWGVQDVWSSLRLPS-GLGCSTVLSPEGSAQFAAQIF-GLSN-- 395 (425)
T ss_dssp EE--EEEECCSSCCHHHHHHHH-CSSCEEECCCCCTTTHHHHGGGTSSCCS-SCCCEECCCHHHHHHHHHHHH-HTTC--
T ss_pred eE--EEEEcCcccchHhHHhcc-CCCCEEEeeCccccccHHHHHHHhcCCC-CCceEEecCchHHHHHHHHHH-ccCC--
Confidence 24 78777753 344443 3679999998521111111111 2 1 33322211 345666665554 4556
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 012563 422 GQEMRERITCLKKNVDAC 439 (460)
Q Consensus 422 ~~~~~~~a~~l~~~~~~~ 439 (460)
..++++.+..+..++.+
T Consensus 396 -~~l~~kl~~~~~~~~~~ 412 (425)
T 2h31_A 396 -HLVWSKLRASILNTWIS 412 (425)
T ss_dssp -HHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHH
Confidence 67888888877777653
No 176
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=37.57 E-value=12 Score=33.12 Aligned_cols=53 Identities=15% Similarity=0.147 Sum_probs=37.5
Q ss_pred cCCCcceeeccCchhhHHHHhh---CCCeeecCcccchhhHHHHHHHhhceeEeeCCccCHHHHHHHHHHHhcc
Q 012563 349 HPAVGGFLTHSGWNSTLESICE---GVPMICQPCLADQMVNARYVSHVWRVGLHLEGKLEKKEIETAIRRLMVE 419 (460)
Q Consensus 349 ~~~~~~~I~HGG~~s~~eal~~---GvP~v~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~l~~~i~~ll~~ 419 (460)
.+++ +|+=||-||+++++.. ++|++.++.. . +|. .. .+.++++.+++.++++.
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~G-----------~-~Gf--l~--~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFKAG-----------R-LGF--LT--SYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEESS-----------S-CCS--SC--CBCGGGHHHHHHHHHTT
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEECC-----------C-CCc--cC--cCCHHHHHHHHHHHHcC
Confidence 3466 9999999999999887 8898888642 1 121 11 34577777777777764
No 177
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=37.54 E-value=37 Score=27.23 Aligned_cols=37 Identities=11% Similarity=0.093 Sum_probs=30.1
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKF 52 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~ 52 (460)
+..+++++..|+ | +.|++++++.|.++|.+|+++ ...
T Consensus 22 ~~~~~llIaGG~-G-ItPl~sm~~~l~~~~~~v~l~-g~r 58 (158)
T 3lrx_A 22 KFGKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HVT 58 (158)
T ss_dssp CCSEEEEEEETT-H-HHHHHHHHHHHHHHTCEEEEE-EEC
T ss_pred CCCeEEEEEccC-c-HHHHHHHHHHHHhcCCcEEEE-EeC
Confidence 456888888554 4 999999999999999999998 543
No 178
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=37.31 E-value=1e+02 Score=23.83 Aligned_cols=59 Identities=14% Similarity=0.053 Sum_probs=36.7
Q ss_pred hCCCeeecCcccchhhHHHHHHHhhceeEeeCCccCHHHHHHHHHHHhccchHHHHHHHHHHHH
Q 012563 370 EGVPMICQPCLADQMVNARYVSHVWRVGLHLEGKLEKKEIETAIRRLMVEAEGQEMRERITCLK 433 (460)
Q Consensus 370 ~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~ 433 (460)
..+|+|++--..+. .......+ .|+--.+...++.++|..+|++++.. ..++...++++
T Consensus 74 ~~~pii~ls~~~~~-~~~~~~~~-~g~~~~l~kP~~~~~L~~~i~~~~~~---~~~~~~~~~~~ 132 (155)
T 1qkk_A 74 PDLPMILVTGHGDI-PMAVQAIQ-DGAYDFIAKPFAADRLVQSARRAEEK---RRLVMENRSLR 132 (155)
T ss_dssp TTSCEEEEECGGGH-HHHHHHHH-TTCCEEEESSCCHHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred CCCCEEEEECCCCh-HHHHHHHh-cCCCeEEeCCCCHHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 47888887554443 33344445 36644454468999999999999976 44444333333
No 179
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=37.08 E-value=13 Score=31.76 Aligned_cols=32 Identities=19% Similarity=0.317 Sum_probs=24.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
|||+++-. |. -...+|+.|.++||+|+++..+
T Consensus 1 M~iiIiG~---G~--~G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGG---ET--TAYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CCEEEECC---HH--HHHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECC---CH--HHHHHHHHHHhCCCeEEEEECC
Confidence 67777754 32 3568999999999999999864
No 180
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=36.93 E-value=53 Score=28.09 Aligned_cols=34 Identities=18% Similarity=0.165 Sum_probs=25.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCC-CeEEEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKG-FSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rG-h~V~~~~~~ 51 (460)
|+.++++ |+.|-+ -..+++.|.++| |+|++++..
T Consensus 23 mk~vlVt-GatG~i--G~~l~~~L~~~G~~~V~~~~R~ 57 (236)
T 3qvo_A 23 MKNVLIL-GAGGQI--ARHVINQLADKQTIKQTLFARQ 57 (236)
T ss_dssp CEEEEEE-TTTSHH--HHHHHHHHTTCTTEEEEEEESS
T ss_pred ccEEEEE-eCCcHH--HHHHHHHHHhCCCceEEEEEcC
Confidence 5666666 444433 468899999999 999998874
No 181
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=36.93 E-value=34 Score=29.53 Aligned_cols=37 Identities=8% Similarity=-0.022 Sum_probs=30.9
Q ss_pred CCcEEEEEcCC--CCCChHHHHHHHHHHHhCCCeEEEEe
Q 012563 13 NGRRVILFPLP--FQGHINPMLQLGSILYSKGFSITIIH 49 (460)
Q Consensus 13 ~~~~il~~~~~--~~GHv~p~l~lA~~L~~rGh~V~~~~ 49 (460)
++|+.++++.. ..|-..-...|++.|+++|++|.++=
T Consensus 2 ~~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 2 NAMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp TTCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 56777777755 55889999999999999999999964
No 182
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=36.74 E-value=28 Score=32.90 Aligned_cols=36 Identities=19% Similarity=0.411 Sum_probs=27.4
Q ss_pred chHHHhccCCCcceeeccCchhhHHHHhh----CC-CeeecCc
Q 012563 342 PQQQVLAHPAVGGFLTHSGWNSTLESICE----GV-PMICQPC 379 (460)
Q Consensus 342 p~~~lL~~~~~~~~I~HGG~~s~~eal~~----Gv-P~v~~P~ 379 (460)
+...+-..+++ +|+=||-||++.++.. ++ |++.+..
T Consensus 107 ~~~~~~~~~Dl--VIvlGGDGTlL~aa~~~~~~~vpPiLGIN~ 147 (388)
T 3afo_A 107 PEQDIVNRTDL--LVTLGGDGTILHGVSMFGNTQVPPVLAFAL 147 (388)
T ss_dssp CHHHHHHHCSE--EEEEESHHHHHHHHHTTTTSCCCCEEEEEC
T ss_pred chhhcccCCCE--EEEEeCcHHHHHHHHHhcccCCCeEEEEEC
Confidence 33445566777 9999999999999654 67 7888764
No 183
>3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A*
Probab=36.65 E-value=33 Score=32.03 Aligned_cols=41 Identities=17% Similarity=0.287 Sum_probs=33.5
Q ss_pred CCCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 10 SPRNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 10 ~~~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
...++.-++++.+|..|.-.-...+++.|+++|+.|..+-.
T Consensus 93 ~~~~~~P~Vv~~HG~~~~~~~~~~~a~~La~~Gy~V~~~d~ 133 (383)
T 3d59_A 93 RPGEKYPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEH 133 (383)
T ss_dssp CCSSCEEEEEEECCTTCCTTTTHHHHHHHHHTTCEEEEECC
T ss_pred ccCCCCCEEEEcCCCCCCchHHHHHHHHHHhCceEEEEecc
Confidence 34456788888888888877788999999999998887765
No 184
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=36.62 E-value=67 Score=27.28 Aligned_cols=103 Identities=9% Similarity=0.035 Sum_probs=0.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCCCCC---CCCCCCceEEeCCCCCCCCCCCCHHHHHHHHHH
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSK--GFSITIIHTKFNSPN---SCNYPHFDFHSISDGLTDPSAEDSTTILITLNA 89 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~r--Gh~V~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (460)
+||+++.+++.+ .+.+|.+.+.+. +++|..+.+...... .+...|+.+..++..-... ..
T Consensus 1 ~riaVl~SG~Gs---~L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~~~~~------------r~ 65 (209)
T 1meo_A 1 ARVAVLISGTGS---NLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKLYKN------------RV 65 (209)
T ss_dssp CEEEEEESSSCT---THHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEECCGGGSSS------------HH
T ss_pred CeEEEEEECCch---HHHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHcCCCEEEECccccCc------------hh
Q ss_pred hcchhHHHHHHHHhhcCCCCCCCCCCceEEEEcCcchHHH--HHhhcCCCeEEEeCc
Q 012563 90 KCMVPFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQFTH--VADEFKLPTIILQTH 144 (460)
Q Consensus 90 ~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~~~~--~A~~lgiP~v~~~~~ 144 (460)
.....+.+.++++ +||+||+-.+...-. +-......++.+.++
T Consensus 66 ~~~~~~~~~l~~~------------~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 110 (209)
T 1meo_A 66 EFDSAIDLVLEEF------------SIDIVCLAGFMRILSGPFVQKWNGKMLNIHPS 110 (209)
T ss_dssp HHHHHHHHHHHHT------------TCCEEEEESCCSCCCHHHHHHTTTSEEEEESS
T ss_pred hhhHHHHHHHHhc------------CCCEEEEcchhhhCCHHHHhhhcCCEEEEccC
No 185
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=36.44 E-value=32 Score=25.39 Aligned_cols=33 Identities=15% Similarity=0.313 Sum_probs=24.3
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCC-CeEEEEeCC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKG-FSITIIHTK 51 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rG-h~V~~~~~~ 51 (460)
.++|+++-. |-+ -..+++.|.++| ++|+++...
T Consensus 5 ~~~v~I~G~---G~i--G~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGA---GKI--GQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECC---SHH--HHHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEECC---CHH--HHHHHHHHHhCCCceEEEEeCC
Confidence 467888744 433 357899999999 999888763
No 186
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=36.10 E-value=28 Score=29.45 Aligned_cols=33 Identities=6% Similarity=0.106 Sum_probs=24.7
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
|||+|+ |+.|.+ -..|+++|.++||+|+.++..
T Consensus 1 MkilVt--GatG~i--G~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVL--GATGRA--GSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEE--cCCCHH--HHHHHHHHHHCCCEEEEEEec
Confidence 676554 444544 468899999999999999874
No 187
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=36.01 E-value=19 Score=37.34 Aligned_cols=108 Identities=11% Similarity=0.093 Sum_probs=75.5
Q ss_pred eccchHHHhccCCCcceeeccCchhhHHHHhhCCCeeecCcccchhhHHHHHHHhhceeEee----CC--ccCHHHHHHH
Q 012563 339 QWAPQQQVLAHPAVGGFLTHSGWNSTLESICEGVPMICQPCLADQMVNARYVSHVWRVGLHL----EG--KLEKKEIETA 412 (460)
Q Consensus 339 ~~vp~~~lL~~~~~~~~I~HGG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~~----~~--~~~~~~l~~~ 412 (460)
++.+-.++|..+++ +||=- ...+.|.+..++|+|......|+... +.+ |.=... .+ --+.++|.++
T Consensus 605 ~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~----~~r-g~y~d~~~~~pg~~~~~~~eL~~~ 676 (729)
T 3l7i_A 605 NYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDK----GLR-GFYMNYMEDLPGPIYTEPYGLAKE 676 (729)
T ss_dssp TCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTS----SCC-SBSSCTTSSSSSCEESSHHHHHHH
T ss_pred CCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhh----ccC-CcccChhHhCCCCeECCHHHHHHH
Confidence 45566789999998 99984 47889999999999998876666432 111 332221 12 3588999999
Q ss_pred HHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 012563 413 IRRLMVEAEGQEMRERITCLKKNVDACLRQGGSSHQALGRLVDHI 457 (460)
Q Consensus 413 i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 457 (460)
|.....+. ..++++.+++.+++.. ..+|.++++.++.+.+..
T Consensus 677 i~~~~~~~--~~~~~~~~~~~~~~~~-~~dg~as~ri~~~i~~~~ 718 (729)
T 3l7i_A 677 LKNLDKVQ--QQYQEKIDAFYDRFCS-VDNGKASQYIGDLIHKDI 718 (729)
T ss_dssp HTTHHHHH--HHTHHHHHHHHHHHST-TCCSCHHHHHHHHHHHHH
T ss_pred Hhhhhccc--hhHHHHHHHHHHHhCC-ccCChHHHHHHHHHHhcC
Confidence 98877531 5678888778777642 246777888888777654
No 188
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=36.01 E-value=23 Score=33.47 Aligned_cols=42 Identities=10% Similarity=0.097 Sum_probs=27.0
Q ss_pred ccccccCCCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 4 KQESRISPRNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 4 ~~~~~~~~~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+.....+..++++|+|+-.|-. -+.+|..|+++|++|+++=.
T Consensus 13 ~~~~~~~~~~~~dV~IVGaG~a-----Gl~~A~~La~~G~~V~v~E~ 54 (407)
T 3rp8_A 13 SSGENLYFQGHMKAIVIGAGIG-----GLSAAVALKQSGIDCDVYEA 54 (407)
T ss_dssp ----------CCEEEEECCSHH-----HHHHHHHHHHTTCEEEEEES
T ss_pred CCCCcccCCCCCEEEEECCCHH-----HHHHHHHHHhCCCCEEEEeC
Confidence 3445556667899999976644 47889999999999999965
No 189
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=35.90 E-value=44 Score=30.76 Aligned_cols=81 Identities=11% Similarity=-0.029 Sum_probs=46.2
Q ss_pred EEEEecccccCCHHHHHHHHHHHHhCCCCEEEEECCCCCCCchhhccCchhHHhhhCCCceEEeccchHHHhccCCCcce
Q 012563 276 IYVSFGSVAAINETEFLEIAWGLANSRVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPAVGGF 355 (460)
Q Consensus 276 v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~ 355 (460)
|+++-.|......+.+..+...|+..+..+.+........ ...+ -.......+++ +
T Consensus 29 vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~~~~--------a~~~--------------~~~~~~~~~d~--v 84 (337)
T 2qv7_A 29 IIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKIGD--------ATLE--------------AERAMHENYDV--L 84 (337)
T ss_dssp EEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCSTTH--------HHHH--------------HHHHTTTTCSE--E
T ss_pred EEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecCcch--------HHHH--------------HHHHhhcCCCE--E
Confidence 4444444322223556778888887776655544322100 0111 01111223455 9
Q ss_pred eeccCchhhHHHHh------hCCCeeecCcc
Q 012563 356 LTHSGWNSTLESIC------EGVPMICQPCL 380 (460)
Q Consensus 356 I~HGG~~s~~eal~------~GvP~v~~P~~ 380 (460)
|.=||-||+.|++. .++|+.++|..
T Consensus 85 vv~GGDGTv~~v~~~l~~~~~~~pl~iIP~G 115 (337)
T 2qv7_A 85 IAAGGDGTLNEVVNGIAEKPNRPKLGVIPMG 115 (337)
T ss_dssp EEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred EEEcCchHHHHHHHHHHhCCCCCcEEEecCC
Confidence 99999999999863 46899999983
No 190
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=35.71 E-value=45 Score=29.86 Aligned_cols=39 Identities=21% Similarity=0.341 Sum_probs=30.9
Q ss_pred CCCcEEEEEcCCCCCChHHH--HHHHHHHHhCC-CeEEEEeCC
Q 012563 12 RNGRRVILFPLPFQGHINPM--LQLGSILYSKG-FSITIIHTK 51 (460)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~--l~lA~~L~~rG-h~V~~~~~~ 51 (460)
.++.||||++ +..+|-.+. -.|++.|.+.| ++|++...+
T Consensus 2 ~~~~kvLiv~-G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 2 RKPIKTLLIT-GQNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCCEEEEEEE-SCCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CCceEEEEEc-CCCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 5789999995 555897554 57888888898 999999863
No 191
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=35.60 E-value=30 Score=29.53 Aligned_cols=34 Identities=12% Similarity=0.109 Sum_probs=24.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
||+++++.++.| --.++|+.|+++|++|+++...
T Consensus 1 Mk~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 1 MSLIVITGASSG---LGAELAKLYDAEGKATYLTGRS 34 (230)
T ss_dssp --CEEEESTTSH---HHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 677788865543 3578999999999999988763
No 192
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=35.53 E-value=43 Score=28.67 Aligned_cols=101 Identities=9% Similarity=0.061 Sum_probs=55.3
Q ss_pred CCCCcEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCCCCCC---CCCCCceEEeCCC-CCCCCCCCCHHHHH
Q 012563 11 PRNGRRVILFPLPFQGHINPMLQLGSILYSK--GFSITIIHTKFNSPNS---CNYPHFDFHSISD-GLTDPSAEDSTTIL 84 (460)
Q Consensus 11 ~~~~~~il~~~~~~~GHv~p~l~lA~~L~~r--Gh~V~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 84 (460)
-.+++||+++.+++.+- +.+|.+.+.+. +++|..+.+....... +...|+.+..++. .+.
T Consensus 5 ~~~~~ri~vl~SG~gsn---l~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~gIp~~~~~~~~~~----------- 70 (215)
T 3kcq_A 5 MKKELRVGVLISGRGSN---LEALAKAFSTEESSVVISCVISNNAEARGLLIAQSYGIPTFVVKRKPLD----------- 70 (215)
T ss_dssp --CCEEEEEEESSCCHH---HHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHTTCCEEECCBTTBC-----------
T ss_pred CCCCCEEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHcCCCEEEeCcccCC-----------
Confidence 35678999888766433 55566666544 3788887774322111 1234666666542 111
Q ss_pred HHHHHhcchhHHHHHHHHhhcCCCCCCCCCCceEEEEcCcchH-HH-HHhhcCCCeEEEeCc
Q 012563 85 ITLNAKCMVPFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQF-TH-VADEFKLPTIILQTH 144 (460)
Q Consensus 85 ~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~~-~~-~A~~lgiP~v~~~~~ 144 (460)
. ..+.+.++++ +||+||+-.+... .. +-....-.++-+.++
T Consensus 71 ~-------~~~~~~L~~~------------~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpS 113 (215)
T 3kcq_A 71 I-------EHISTVLREH------------DVDLVCLAGFMSILPEKFVTDWHHKIINIHPS 113 (215)
T ss_dssp H-------HHHHHHHHHT------------TCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred h-------HHHHHHHHHh------------CCCEEEEeCCceEeCHHHHhhccCCeEEECcc
Confidence 0 1223333443 8999998876422 22 555565667776665
No 193
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=35.53 E-value=22 Score=32.72 Aligned_cols=33 Identities=21% Similarity=0.184 Sum_probs=28.0
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.|||+|+-.|+.| ..+|..|+++||+|+++..+
T Consensus 3 ~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVG-----GYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEECh
Confidence 5899999888777 46789999999999999863
No 194
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=35.45 E-value=1.8e+02 Score=23.59 Aligned_cols=142 Identities=10% Similarity=0.119 Sum_probs=80.0
Q ss_pred eEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEECCCCCCCchhhccCchhHHhhhCCCceEEeccchHHHhccCCCc
Q 012563 274 SVIYVSFGSVAAINETEFLEIAWGLANSRVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPAVG 353 (460)
Q Consensus 274 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~~~ 353 (460)
|.|-|-+||.. +....+.....|+..+..+-..+... ...|+.+.+ |+ .-+....++
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa--------HRtp~~l~~----------~~---~~~~~~g~~ 62 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVVSA--------HRTPDKMFD----------YA---ETAKERGLK 62 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCT--------TTCHHHHHH----------HH---HHTTTTTCC
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcC--------cCCHHHHHH----------HH---HHHHhCCCc
Confidence 55667777766 45667788888888888765555442 235555521 11 111122234
Q ss_pred ceeeccCchhhHHHHhh---CCCeeecCcccch--hhHH-HHHHHhh--ceeEeeCC-----ccCHHHHHHHHHHHhccc
Q 012563 354 GFLTHSGWNSTLESICE---GVPMICQPCLADQ--MVNA-RYVSHVW--RVGLHLEG-----KLEKKEIETAIRRLMVEA 420 (460)
Q Consensus 354 ~~I~HGG~~s~~eal~~---GvP~v~~P~~~DQ--~~na-~~v~~~l--G~G~~~~~-----~~~~~~l~~~i~~ll~~~ 420 (460)
++|.=+|.-.-+-++.+ -+|+|.+|...-. ...+ --+.+ + |+++..-. ..+...++..|- -+.|
T Consensus 63 ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vq-mp~gvpVatV~I~~ag~~nAa~lAa~Il-~~~d- 139 (166)
T 3oow_A 63 VIIAGAGGAAHLPGMVAAKTTLPVLGVPVKSSTLNGQDSLLSIVQ-MPAGIPVATFAIGMAGAKNAALFAASIL-QHTD- 139 (166)
T ss_dssp EEEEEECSSCCHHHHHHHTCSSCEEEEECCCTTTTTHHHHHHHHT-CCTTSCCEECCSTHHHHHHHHHHHHHHH-GGGC-
T ss_pred EEEEECCcchhhHHHHHhccCCCEEEeecCcCCCCCHHHHHHHhc-CCCCCceEEEecCCccchHHHHHHHHHH-cCCC-
Confidence 49988886444443333 4699999985321 1111 11233 2 33332211 234455554443 3456
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcC
Q 012563 421 EGQEMRERITCLKKNVDACLRQG 443 (460)
Q Consensus 421 ~~~~~~~~a~~l~~~~~~~~~~~ 443 (460)
..++++.+.+++.+++.+.+.
T Consensus 140 --~~l~~kl~~~r~~~~~~v~~~ 160 (166)
T 3oow_A 140 --INIAKALAEFRAEQTRFVLEN 160 (166)
T ss_dssp --HHHHHHHHHHHHHHHHHHHTC
T ss_pred --HHHHHHHHHHHHHHHHHHHhc
Confidence 799999999999998766544
No 195
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=35.23 E-value=34 Score=26.01 Aligned_cols=41 Identities=15% Similarity=0.071 Sum_probs=28.6
Q ss_pred cCCCCCcEEEEEcCCCCCCh--HHHHHHHHHHHhCC--CeEEEEeCC
Q 012563 9 ISPRNGRRVILFPLPFQGHI--NPMLQLGSILYSKG--FSITIIHTK 51 (460)
Q Consensus 9 ~~~~~~~~il~~~~~~~GHv--~p~l~lA~~L~~rG--h~V~~~~~~ 51 (460)
||.. ||++|+-....-.. +..+..|....++| |+|.++...
T Consensus 4 ~~~~--~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G 48 (117)
T 2fb6_A 4 MSAN--DKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWG 48 (117)
T ss_dssp SSTT--SEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECS
T ss_pred cccC--CeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEEC
Confidence 4444 77777665543222 45788899999999 899999874
No 196
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=35.19 E-value=17 Score=32.80 Aligned_cols=32 Identities=9% Similarity=0.040 Sum_probs=25.8
Q ss_pred HhccCCCcceeeccCchhhHHHHhh----CCCeeecCc
Q 012563 346 VLAHPAVGGFLTHSGWNSTLESICE----GVPMICQPC 379 (460)
Q Consensus 346 lL~~~~~~~~I~HGG~~s~~eal~~----GvP~v~~P~ 379 (460)
+-..+++ +|+=||-||+++++.. ++|++.++.
T Consensus 60 ~~~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 60 IGQQADL--AVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HHHHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred cccCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 3345666 9999999999999853 789999884
No 197
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=34.71 E-value=1e+02 Score=26.79 Aligned_cols=34 Identities=9% Similarity=0.023 Sum_probs=28.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
-|+++++.++.| =-.++|+.|++.|.+|.+....
T Consensus 11 GK~alVTGas~G---IG~aia~~la~~Ga~Vv~~~~~ 44 (242)
T 4b79_A 11 GQQVLVTGGSSG---IGAAIAMQFAELGAEVVALGLD 44 (242)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 488899977765 3688999999999999988764
No 198
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=34.67 E-value=1.9e+02 Score=23.64 Aligned_cols=143 Identities=15% Similarity=0.167 Sum_probs=80.3
Q ss_pred eEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEECCCCCCCchhhccCchhHHhhhCCCceEEeccchHHHhccCCCc
Q 012563 274 SVIYVSFGSVAAINETEFLEIAWGLANSRVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPAVG 353 (460)
Q Consensus 274 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~~~ 353 (460)
+.|-|-+||.. +....+.....|+..+.++-..+... ...|+.+.+.. .. .....++
T Consensus 13 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev~V~Sa--------HR~p~~~~~~~----------~~---a~~~g~~ 69 (174)
T 3kuu_A 13 VKIAIVMGSKS--DWATMQFAADVLTTLNVPFHVEVVSA--------HRTPDRLFSFA----------EQ---AEANGLH 69 (174)
T ss_dssp CCEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTCHHHHHHHH----------HH---TTTTTCS
T ss_pred CcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcc--------cCCHHHHHHHH----------HH---HHhCCCc
Confidence 44666677765 45667788888888888876555443 23555552111 00 1112233
Q ss_pred ceeeccCchhhHHHHhh---CCCeeecCcccchh-hHHHH--HHHhh--ce--eEee-C--CccCHHHHHHHHHHHhccc
Q 012563 354 GFLTHSGWNSTLESICE---GVPMICQPCLADQM-VNARY--VSHVW--RV--GLHL-E--GKLEKKEIETAIRRLMVEA 420 (460)
Q Consensus 354 ~~I~HGG~~s~~eal~~---GvP~v~~P~~~DQ~-~na~~--v~~~l--G~--G~~~-~--~~~~~~~l~~~i~~ll~~~ 420 (460)
++|.=+|...-+-++.+ -+|+|.+|...--. ..... +.+ + |+ +... + ...+...++..|- -+.|
T Consensus 70 ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vq-mP~GvPVatV~I~~a~~~nAa~lAa~IL-a~~d- 146 (174)
T 3kuu_A 70 VIIAGNGGAAHLPGMLAAKTLVPVLGVPVQSAALSGVDSLYSIVQ-MPRGIPVGTLAIGKAGAANAALLAAQIL-ALHD- 146 (174)
T ss_dssp EEEEEEESSCCHHHHHHHTCSSCEEEEEECCTTTTTHHHHHHHHT-CCTTSCCEECCSSHHHHHHHHHHHHHHH-HTTC-
T ss_pred EEEEECChhhhhHHHHHhccCCCEEEeeCCCCCCCCHHHHHHhhh-CCCCCeeEEEEeCCccchHHHHHHHHHH-cCCC-
Confidence 48888776444443333 46999999854211 11112 222 2 43 2221 2 1234555555554 3456
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCC
Q 012563 421 EGQEMRERITCLKKNVDACLRQGG 444 (460)
Q Consensus 421 ~~~~~~~~a~~l~~~~~~~~~~~g 444 (460)
..++++.+.+++.+++.+.+..
T Consensus 147 --~~l~~kl~~~r~~~~~~v~~~~ 168 (174)
T 3kuu_A 147 --TELAGRLAHWRQSQTDDVLDNP 168 (174)
T ss_dssp --HHHHHHHHHHHHHHHHHHHTCC
T ss_pred --HHHHHHHHHHHHHHHHHHHhCc
Confidence 7999999999999987765543
No 199
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=34.67 E-value=50 Score=27.55 Aligned_cols=38 Identities=18% Similarity=0.114 Sum_probs=31.2
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
++..++++.++..|...-+..+++.|+++|+.|..+--
T Consensus 26 ~~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 63 (236)
T 1zi8_A 26 APAPVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDL 63 (236)
T ss_dssp CSEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECG
T ss_pred CCCCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEeccc
Confidence 34567777788888888899999999999999877664
No 200
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=34.65 E-value=31 Score=29.06 Aligned_cols=37 Identities=14% Similarity=0.232 Sum_probs=29.9
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEe
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIH 49 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~ 49 (460)
.+...+++.+|..|+-.-+..+++.|.++|+.|..+-
T Consensus 20 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d 56 (251)
T 3dkr_A 20 GTDTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPL 56 (251)
T ss_dssp CSSEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECC
T ss_pred CCCceEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecC
Confidence 3456677788888888889999999999999886653
No 201
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=34.51 E-value=22 Score=32.29 Aligned_cols=32 Identities=9% Similarity=0.016 Sum_probs=27.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
+|||+|+-.|+.|- .+|..|+ +||+|+++...
T Consensus 2 ~mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 2 SLKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSC
T ss_pred CCEEEEECCCHHHH-----HHHHHHh-cCCceEEEECC
Confidence 48999998888875 6788888 99999999874
No 202
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=34.46 E-value=18 Score=31.13 Aligned_cols=109 Identities=6% Similarity=0.004 Sum_probs=0.0
Q ss_pred CCCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCC--CCCCceEEeCCCCCCCCCCCCHHHHHHHH
Q 012563 10 SPRNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNSPNSC--NYPHFDFHSISDGLTDPSAEDSTTILITL 87 (460)
Q Consensus 10 ~~~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (460)
++..++||+++.+|+.+.+..++.-.+. +.+++|..+.+........ ...|+.+..++..-...
T Consensus 8 ~~~~~~ri~vl~SG~gsnl~all~~~~~--~~~~eI~~Vis~~~a~~~~~A~~~gIp~~~~~~~~~~~------------ 73 (215)
T 3da8_A 8 PPSAPARLVVLASGTGSLLRSLLDAAVG--DYPARVVAVGVDRECRAAEIAAEASVPVFTVRLADHPS------------ 73 (215)
T ss_dssp CCCSSEEEEEEESSCCHHHHHHHHHSST--TCSEEEEEEEESSCCHHHHHHHHTTCCEEECCGGGSSS------------
T ss_pred CCCCCcEEEEEEeCChHHHHHHHHHHhc--cCCCeEEEEEeCCchHHHHHHHHcCCCEEEeCcccccc------------
Q ss_pred HHhcchhHHHHHHHHhhcCCCCCCCCCCceEEEEcCcchHHH--HHhhcCCCeEEEeCc
Q 012563 88 NAKCMVPFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQFTH--VADEFKLPTIILQTH 144 (460)
Q Consensus 88 ~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~~~~--~A~~lgiP~v~~~~~ 144 (460)
+...+..+.+.++++ +||++|+-.+...-. +-....-.++-+.++
T Consensus 74 r~~~d~~~~~~l~~~------------~~Dlivlagy~~iL~~~~l~~~~~~~iNiHpS 120 (215)
T 3da8_A 74 RDAWDVAITAATAAH------------EPDLVVSAGFMRILGPQFLSRFYGRTLNTHPA 120 (215)
T ss_dssp HHHHHHHHHHHHHTT------------CCSEEEEEECCSCCCHHHHHHHTTTEEEEESS
T ss_pred hhhhhHHHHHHHHhh------------CCCEEEEcCchhhCCHHHHhhccCCeEEeCcc
No 203
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=34.42 E-value=23 Score=32.46 Aligned_cols=36 Identities=14% Similarity=0.270 Sum_probs=26.2
Q ss_pred CCCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 10 SPRNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 10 ~~~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+..+-++|.|+-.|..| ..+|..|+++||+|+++-.
T Consensus 2 ~~~~~~kI~vIGaG~MG-----~~iA~~la~~G~~V~l~d~ 37 (319)
T 2dpo_A 2 ASPAAGDVLIVGSGLVG-----RSWAMLFASGGFRVKLYDI 37 (319)
T ss_dssp -----CEEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCCCceEEEEeeCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 34455789999877666 5789999999999998765
No 204
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=34.36 E-value=21 Score=32.38 Aligned_cols=33 Identities=15% Similarity=0.012 Sum_probs=26.8
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
++|+|+|+-.|..| ..+|+.|+++||+|+++..
T Consensus 6 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 6 TDFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADL 38 (303)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEEC
Confidence 46899999777666 4789999999999998865
No 205
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=34.19 E-value=50 Score=29.47 Aligned_cols=38 Identities=8% Similarity=-0.064 Sum_probs=28.2
Q ss_pred CcEEEEEcCCCC-CChH---HHHHHHHHHHhCCCeEEEEeCC
Q 012563 14 GRRVILFPLPFQ-GHIN---PMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 14 ~~~il~~~~~~~-GHv~---p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
+|+|+++..+.. -|-. -...++++|.++||+|.++...
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 578999985532 2222 3468999999999999998874
No 206
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=33.88 E-value=1.9e+02 Score=25.12 Aligned_cols=36 Identities=8% Similarity=0.036 Sum_probs=27.6
Q ss_pred cEEEEEcCCCCCCh-HHHHHHHHHHHhCCCeEEEEeC
Q 012563 15 RRVILFPLPFQGHI-NPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~il~~~~~~~GHv-~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
|||+++..-+.-++ ..+...++.++.-|.+|.+++.
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~p~~~i~~~t~ 38 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAAPGTEILAVCP 38 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCCTTEEEEEECC
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcCCCCEEEEEeC
Confidence 78999887777666 4566788887766888888775
No 207
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=33.83 E-value=34 Score=31.87 Aligned_cols=40 Identities=15% Similarity=0.166 Sum_probs=23.0
Q ss_pred cccccCCCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 5 QESRISPRNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 5 ~~~~~~~~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+.++-.+.++|||+++ |+ |.+- ..+|+.|++ .++|+++..
T Consensus 7 ~~~~~~~g~~mkilvl--Ga-G~vG--~~~~~~L~~-~~~v~~~~~ 46 (365)
T 3abi_A 7 HHHHHIEGRHMKVLIL--GA-GNIG--RAIAWDLKD-EFDVYIGDV 46 (365)
T ss_dssp ---------CCEEEEE--CC-SHHH--HHHHHHHTT-TSEEEEEES
T ss_pred cccccccCCccEEEEE--CC-CHHH--HHHHHHHhc-CCCeEEEEc
Confidence 4566678889999999 44 6664 356788864 589988765
No 208
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=33.48 E-value=45 Score=29.83 Aligned_cols=33 Identities=12% Similarity=0.207 Sum_probs=25.9
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
++|+|+|+-.|..|. .+|+.|.+.||+|+++..
T Consensus 3 ~~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 3 KSIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp -CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 468999998777774 468889999999987654
No 209
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=33.26 E-value=62 Score=27.66 Aligned_cols=47 Identities=28% Similarity=0.294 Sum_probs=27.0
Q ss_pred CccccccccCCCCCc-EEEEEcCCCCCC----hHHHHHHHHHHHhCCCeEEEEe
Q 012563 1 METKQESRISPRNGR-RVILFPLPFQGH----INPMLQLGSILYSKGFSITIIH 49 (460)
Q Consensus 1 ~~~~~~~~~~~~~~~-~il~~~~~~~GH----v~p~l~lA~~L~~rGh~V~~~~ 49 (460)
||.+-++... ++| +|.+++....+- ..-...|++.|+++|+.|+.=.
T Consensus 1 ~~~~~~~~~~--~~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGG 52 (215)
T 2a33_A 1 MEIKGESMQK--SKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGG 52 (215)
T ss_dssp -------CCC--CSCSEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCcccccccc--CCCCeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECC
Confidence 3444444333 344 699997666553 2346788899999998886544
No 210
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=33.20 E-value=81 Score=27.16 Aligned_cols=24 Identities=8% Similarity=0.200 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHhCCCeEEEEeCCC
Q 012563 29 NPMLQLGSILYSKGFSITIIHTKF 52 (460)
Q Consensus 29 ~p~l~lA~~L~~rGh~V~~~~~~~ 52 (460)
.--.++|++|+++|++|+++..+.
T Consensus 35 ~iG~aiA~~~~~~Ga~V~l~~~~~ 58 (226)
T 1u7z_A 35 KMGFAIAAAAARRGANVTLVSGPV 58 (226)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSC
T ss_pred HHHHHHHHHHHHCCCEEEEEECCc
Confidence 456789999999999999987643
No 211
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=33.13 E-value=32 Score=28.91 Aligned_cols=31 Identities=26% Similarity=0.174 Sum_probs=23.5
Q ss_pred cEEEEEc-CCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 15 RRVILFP-LPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~il~~~-~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
|||+++- .|..| ..+|+.|.++||+|+++..
T Consensus 1 m~i~iiGa~G~~G-----~~ia~~l~~~g~~V~~~~r 32 (212)
T 1jay_A 1 MRVALLGGTGNLG-----KGLALRLATLGHEIVVGSR 32 (212)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHTTTCEEEEEES
T ss_pred CeEEEEcCCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 6788885 44444 4688999999999998765
No 212
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=33.05 E-value=1.2e+02 Score=25.83 Aligned_cols=43 Identities=14% Similarity=0.054 Sum_probs=28.6
Q ss_pred eEEeccch-HHHh-ccCCCcceeeccCchhhHHHHh---------hCCCeeecCc
Q 012563 336 YIVQWAPQ-QQVL-AHPAVGGFLTHSGWNSTLESIC---------EGVPMICQPC 379 (460)
Q Consensus 336 ~~~~~vp~-~~lL-~~~~~~~~I~HGG~~s~~eal~---------~GvP~v~~P~ 379 (460)
.+....+. ..++ ..++ ..++--||.||+-|... +++|++++-.
T Consensus 94 ~~~~~f~~Rk~~~~~~sd-a~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 94 RAVADMHQRKAEMAKHSD-AFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp EEESSHHHHHHHHHHTCS-EEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred eecCCHHHHHHHHHHhCC-EEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 34455554 3344 3444 45777899999988763 3899998765
No 213
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=32.97 E-value=1.1e+02 Score=28.12 Aligned_cols=38 Identities=3% Similarity=-0.091 Sum_probs=26.5
Q ss_pred CcEEEEEcCCCCC--Ch--HHHHHHHHHHHhCCCeEEEEeCC
Q 012563 14 GRRVILFPLPFQG--HI--NPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 14 ~~~il~~~~~~~G--Hv--~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
+..|++.|..+.. .+ .-+.+|++.|.++|++|++++.+
T Consensus 185 ~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~ 226 (349)
T 3tov_A 185 DILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGP 226 (349)
T ss_dssp CCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCT
T ss_pred CCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCc
Confidence 4456676655432 22 35899999999899999886653
No 214
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=32.73 E-value=35 Score=31.50 Aligned_cols=29 Identities=10% Similarity=0.314 Sum_probs=21.0
Q ss_pred CceEEEEcCcchHHH--HHhhcCCCeEEEeC
Q 012563 115 SVACLITDFLWQFTH--VADEFKLPTIILQT 143 (460)
Q Consensus 115 ~pDlvI~D~~~~~~~--~A~~lgiP~v~~~~ 143 (460)
+||+||......... ..+.+|||++.+..
T Consensus 96 ~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~~ 126 (346)
T 2etv_A 96 QPDVVFITYVDRXTAXDIQEXTGIPVVVLSY 126 (346)
T ss_dssp CCSEEEEESCCHHHHHHHHHHHTSCEEEECC
T ss_pred CCCEEEEeCCccchHHHHHHhcCCcEEEEec
Confidence 899999875432222 56788999998754
No 215
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=32.44 E-value=34 Score=31.05 Aligned_cols=33 Identities=21% Similarity=0.303 Sum_probs=26.9
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+.|+|.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 20 ~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr 52 (310)
T 3doj_A 20 HMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNR 52 (310)
T ss_dssp CSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred cCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 34899999776655 6789999999999998765
No 216
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=32.42 E-value=28 Score=29.63 Aligned_cols=33 Identities=15% Similarity=0.153 Sum_probs=24.4
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+.|+|+|+-.|..| ..+|+.|.+.||+|+++..
T Consensus 27 ~~~~I~iiG~G~~G-----~~la~~l~~~g~~V~~~~r 59 (215)
T 2vns_A 27 EAPKVGILGSGDFA-----RSLATRLVGSGFKVVVGSR 59 (215)
T ss_dssp --CCEEEECCSHHH-----HHHHHHHHHTTCCEEEEES
T ss_pred CCCEEEEEccCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 45899999655444 4678899999999998765
No 217
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=32.33 E-value=39 Score=30.30 Aligned_cols=37 Identities=5% Similarity=0.090 Sum_probs=28.1
Q ss_pred cEEEEEcCCCCCC---hHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 15 RRVILFPLPFQGH---INPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GH---v~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
|||+|+..+.... ......++++|.++||+|.++.+.
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 5999999774321 234567999999999999998763
No 218
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=32.33 E-value=41 Score=29.60 Aligned_cols=35 Identities=6% Similarity=0.177 Sum_probs=26.8
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
..|+++++.++.| --.++|+.|+++|++|+++...
T Consensus 15 ~~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 49 (266)
T 3p19_A 15 MKKLVVITGASSG---IGEAIARRFSEEGHPLLLLARR 49 (266)
T ss_dssp CCCEEEEESTTSH---HHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEECC
Confidence 4577888866543 3568999999999999998763
No 219
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=32.33 E-value=57 Score=28.39 Aligned_cols=36 Identities=25% Similarity=0.220 Sum_probs=26.7
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 12 RNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
...||.++++.++.| --.++|+.|+++|++|+++..
T Consensus 4 ~~~~k~vlVTGas~g---IG~~~a~~l~~~G~~v~~~~~ 39 (264)
T 3i4f_A 4 GRFVRHALITAGTKG---LGKQVTEKLLAKGYSVTVTYH 39 (264)
T ss_dssp --CCCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred ccccCEEEEeCCCch---hHHHHHHHHHHCCCEEEEEcC
Confidence 345788888855542 247899999999999998865
No 220
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=32.31 E-value=24 Score=32.31 Aligned_cols=31 Identities=23% Similarity=0.150 Sum_probs=25.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
|||+|+-.|..| ..+|..|.++||+|+++..
T Consensus 1 m~I~iiG~G~mG-----~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMG-----SALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEEc
Confidence 688998777666 4678999999999999876
No 221
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=31.87 E-value=2.1e+02 Score=23.37 Aligned_cols=115 Identities=11% Similarity=0.004 Sum_probs=63.7
Q ss_pred CeEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEECCCCCCCchhhccCchhHHhhhCCCceE---EeccchHHHhcc
Q 012563 273 KSVIYVSFGSVAAINETEFLEIAWGLANSRVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYI---VQWAPQQQVLAH 349 (460)
Q Consensus 273 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~vp~~~lL~~ 349 (460)
+.+++.-.||..... ...+++.|.+.+.++-.+.......- . -+..++ ...+.++. ..|+++..+-..
T Consensus 6 k~IllgvTGs~aa~k---~~~ll~~L~~~g~~V~vv~T~~A~~f---i--~~~~l~-~l~~~v~~~~~~~~~~hi~l~~~ 76 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN---ISHYIIELKSKFDEVNVIASTNGRKF---I--NGEILK-QFCDNYYDEFEDPFLNHVDIANK 76 (175)
T ss_dssp CEEEEEECSSGGGGG---HHHHHHHHTTTCSEEEEEECTGGGGG---S--CHHHHH-HHCSCEECTTTCTTCCHHHHHHT
T ss_pred CEEEEEEeCHHHHHH---HHHHHHHHHHCCCEEEEEECcCHHHH---h--hHHHHH-HhcCCEEecCCCCccccccccch
Confidence 456666666666532 44566777777877766665543110 0 122232 22222221 134667777666
Q ss_pred CCCcceeeccCchhhH-------------HHHhhCCCeeecCccc----ch---hhHHHHHHHhhceeE
Q 012563 350 PAVGGFLTHSGWNSTL-------------ESICEGVPMICQPCLA----DQ---MVNARYVSHVWRVGL 398 (460)
Q Consensus 350 ~~~~~~I~HGG~~s~~-------------eal~~GvP~v~~P~~~----DQ---~~na~~v~~~lG~G~ 398 (460)
+++ .+|--+-+||+. -++..++|++++|-.- +. ..|-..+.+ +|+-+
T Consensus 77 aD~-~vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~-~G~~i 143 (175)
T 3qjg_A 77 HDK-IIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKD-YGVSI 143 (175)
T ss_dssp CSE-EEEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHHHH-TTCEE
T ss_pred hCE-EEEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHHHH-CCCEE
Confidence 664 466666666543 3467789999999421 21 346677777 57644
No 222
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=31.64 E-value=47 Score=28.92 Aligned_cols=37 Identities=22% Similarity=0.276 Sum_probs=24.9
Q ss_pred CcEEEEEcCCCCCCh--HHHHHHHHHHHhCCCeEEEEeC
Q 012563 14 GRRVILFPLPFQGHI--NPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~il~~~~~~~GHv--~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+.-++++.+|..||- .-+..+|+.|+++|+.|..+-.
T Consensus 55 ~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~ 93 (259)
T 4ao6_A 55 SDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDG 93 (259)
T ss_dssp CSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECC
T ss_pred CCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeecc
Confidence 446788888888874 3578899999999998887654
No 223
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=31.62 E-value=60 Score=29.13 Aligned_cols=109 Identities=8% Similarity=0.062 Sum_probs=0.0
Q ss_pred CCCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC-CCCCCCCCCCCceEEeCCCCCCCCCCCCHHHHHHHHH
Q 012563 10 SPRNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK-FNSPNSCNYPHFDFHSISDGLTDPSAEDSTTILITLN 88 (460)
Q Consensus 10 ~~~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (460)
...+++||+++.++. ||-.-.+--+..--+-..+|..+.+. ......+...|+.++.+|......
T Consensus 86 ~~~~~~ri~vl~Sg~-g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~gIp~~~~~~~~~~r------------- 151 (286)
T 3n0v_A 86 APNHRPKVVIMVSKA-DHCLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAHWHKIPYYHFALDPKDK------------- 151 (286)
T ss_dssp CTTCCCEEEEEESSC-CHHHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHHHTTCCEEECCCBTTBH-------------
T ss_pred cCCCCcEEEEEEeCC-CCCHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHHHcCCCEEEeCCCcCCH-------------
Q ss_pred HhcchhHHHHHHHHhhcCCCCCCCCCCceEEEEcCcchHHH--HHhhcCCCeEEEeCc
Q 012563 89 AKCMVPFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQFTH--VADEFKLPTIILQTH 144 (460)
Q Consensus 89 ~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~~~~--~A~~lgiP~v~~~~~ 144 (460)
...+..+.+.+++. +||+||.-.+...-. +-..+.-.++-+.++
T Consensus 152 ~~~~~~~~~~l~~~------------~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 197 (286)
T 3n0v_A 152 PGQERKVLQVIEET------------GAELVILARYMQVLSPELCRRLDGWAINIHHS 197 (286)
T ss_dssp HHHHHHHHHHHHHH------------TCSEEEESSCCSCCCHHHHHHTTTSEEEEEEC
T ss_pred HHHHHHHHHHHHhc------------CCCEEEecccccccCHHHHhhhcCCeEEeccc
No 224
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=31.58 E-value=95 Score=22.96 Aligned_cols=38 Identities=8% Similarity=-0.024 Sum_probs=31.1
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.+||+++|..+.|--.-.-.+=+.+.++|.++.+...+
T Consensus 3 mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~~ 40 (106)
T 1e2b_A 3 KKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFP 40 (106)
T ss_dssp CEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEEC
T ss_pred CcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 46899999998887777778888899999998776653
No 225
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=31.46 E-value=44 Score=31.31 Aligned_cols=38 Identities=13% Similarity=0.129 Sum_probs=29.6
Q ss_pred CCcEEEEEcCCCCC-C---hHHHHHHHHHH-HhCCCeEEEEeC
Q 012563 13 NGRRVILFPLPFQG-H---INPMLQLGSIL-YSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~il~~~~~~~G-H---v~p~l~lA~~L-~~rGh~V~~~~~ 50 (460)
+||||+++..|..+ | +.-...++++| .++||+|+.+-.
T Consensus 2 ~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~ 44 (377)
T 1ehi_A 2 TKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAI 44 (377)
T ss_dssp -CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEE
T ss_pred CCcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEE
Confidence 37899999866544 3 33578899999 999999999875
No 226
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=31.40 E-value=45 Score=30.15 Aligned_cols=30 Identities=13% Similarity=0.373 Sum_probs=26.0
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 16 RVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 16 ~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
||.|+-.|.+| .++|+.|.++||+|+++-.
T Consensus 5 kIgfIGlG~MG-----~~mA~~L~~~G~~v~v~dr 34 (300)
T 3obb_A 5 QIAFIGLGHMG-----APMATNLLKAGYLLNVFDL 34 (300)
T ss_dssp EEEEECCSTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred EEEEeeehHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 79999999888 4789999999999998743
No 227
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=31.37 E-value=50 Score=29.67 Aligned_cols=38 Identities=11% Similarity=0.044 Sum_probs=31.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.+.|+|..-|+-|=..-...||..|+++|++|.++=.+
T Consensus 41 ~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D 78 (307)
T 3end_A 41 AKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCD 78 (307)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 34555555567799999999999999999999999765
No 228
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=31.34 E-value=80 Score=28.72 Aligned_cols=38 Identities=13% Similarity=0.204 Sum_probs=25.7
Q ss_pred CcEEEEEcCCCCC---ChH--HHHHHHHHHHhCCCeEEEEeCC
Q 012563 14 GRRVILFPLPFQG---HIN--PMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 14 ~~~il~~~~~~~G---Hv~--p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
+..|++.|....+ .+- -+.++++.|.++|++|++++.+
T Consensus 180 ~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~ 222 (348)
T 1psw_A 180 RPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSA 222 (348)
T ss_dssp SCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCG
T ss_pred CcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeCh
Confidence 3456666644222 233 6889999999899998887653
No 229
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=31.19 E-value=57 Score=27.75 Aligned_cols=41 Identities=12% Similarity=0.137 Sum_probs=28.4
Q ss_pred cCCCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 9 ISPRNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 9 ~~~~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
.+...+.- +++.+|..|+..-...+++.|.++|++|..+--
T Consensus 7 ~~~~~~~~-vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~D~ 47 (267)
T 3sty_A 7 MSPFVKKH-FVLVHAAFHGAWCWYKIVALMRSSGHNVTALDL 47 (267)
T ss_dssp ---CCCCE-EEEECCTTCCGGGGHHHHHHHHHTTCEEEEECC
T ss_pred CCCCCCCe-EEEECCCCCCcchHHHHHHHHHhcCCeEEEecc
Confidence 33444444 455557777777788999999999999887754
No 230
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=31.04 E-value=66 Score=27.46 Aligned_cols=37 Identities=5% Similarity=0.034 Sum_probs=29.2
Q ss_pred CcEEEEEcCCCCCC--hHHHHHHHHHHHhCCCeEEEEeC
Q 012563 14 GRRVILFPLPFQGH--INPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~il~~~~~~~GH--v~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+..++++.+|..|+ ..-+..+++.|.++|+.|..+--
T Consensus 45 ~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 83 (270)
T 3pfb_A 45 IYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDF 83 (270)
T ss_dssp SEEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEcc
Confidence 35667777787766 66688999999999999887754
No 231
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=30.99 E-value=47 Score=28.75 Aligned_cols=33 Identities=15% Similarity=0.029 Sum_probs=25.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
||+++++.++. - =-.++|+.|+++|++|+++..
T Consensus 1 mk~vlVTGas~-g--IG~~~a~~l~~~G~~V~~~~r 33 (257)
T 1fjh_A 1 MSIIVISGCAT-G--IGAATRKVLEAAGHQIVGIDI 33 (257)
T ss_dssp CCEEEEETTTS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCC-H--HHHHHHHHHHHCCCEEEEEeC
Confidence 56677775543 2 357899999999999998876
No 232
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=30.92 E-value=56 Score=25.76 Aligned_cols=99 Identities=7% Similarity=0.056 Sum_probs=54.3
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCCCCCCCCCCCHHHHHHHHHHhcch
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNSPNSCNYPHFDFHSISDGLTDPSAEDSTTILITLNAKCMV 93 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (460)
+.-.+++..+..-.+.+.+.+|...++.|++|+++.+......... .+..-...|. ...........++..+...-..
T Consensus 8 ~kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~~l~k-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 85 (144)
T 2qs7_A 8 KKLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQAITK-RSLNSQQPPQ-IDKNYEQMGPIMMQKMQEMKYP 85 (144)
T ss_dssp CEEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHTBH-HHHHCCSCCC-CCGGGGGGHHHHHHHHHHTTCC
T ss_pred CCEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHHHHhc-cccccccccc-ccccchhhHHHHHHHhhhcCCC
Confidence 3445555666778889999999999999999999998422211110 0000000010 0000000023344444444445
Q ss_pred hHHHHHHHHhhcCCCCCCCCCC-ceEEEEcC
Q 012563 94 PFRNCLAKLVSNTNNNNAQEDS-VACLITDF 123 (460)
Q Consensus 94 ~l~~~l~~l~~~~~~~~~~~~~-pDlvI~D~ 123 (460)
.+.+.++.+.+. + ..+++|..
T Consensus 86 ~~~~ll~~~~~~---------G~v~~~aC~~ 107 (144)
T 2qs7_A 86 MWHQLVQQAKEI---------GEVKVFACST 107 (144)
T ss_dssp CHHHHHHHHHHH---------SEEEEEEEHH
T ss_pred CHHHHHHHHHHC---------CCeEEEEeHH
Confidence 677888888766 5 66777763
No 233
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=30.88 E-value=67 Score=27.71 Aligned_cols=34 Identities=21% Similarity=0.291 Sum_probs=25.3
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.+.++++.++.| --.++|+.|+++|++|+++...
T Consensus 15 ~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~ 48 (247)
T 1uzm_A 15 SRSVLVTGGNRG---IGLAIAQRLAADGHKVAVTHRG 48 (247)
T ss_dssp CCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 356777755432 3578899999999999998763
No 234
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=30.83 E-value=44 Score=29.08 Aligned_cols=33 Identities=6% Similarity=-0.133 Sum_probs=24.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
||+++++.++.| + -.++|+.|+++|++|+++..
T Consensus 1 Mk~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~r 33 (254)
T 1zmt_A 1 MSTAIVTNVKHF-G--GMGSALRLSEAGHTVACHDE 33 (254)
T ss_dssp -CEEEESSTTST-T--HHHHHHHHHHTTCEEEECCG
T ss_pred CeEEEEeCCCch-H--HHHHHHHHHHCCCEEEEEeC
Confidence 577888865543 3 46899999999999888754
No 235
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=30.80 E-value=33 Score=30.65 Aligned_cols=32 Identities=16% Similarity=0.251 Sum_probs=24.5
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEe
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIH 49 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~ 49 (460)
+.|+|+|+-.|..|. .+|+.|.+.||+|+++.
T Consensus 2 ~~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 2 NAMKLGFIGLGIMGS-----PMAINLARAGHQLHVTT 33 (295)
T ss_dssp --CEEEECCCSTTHH-----HHHHHHHHTTCEEEECC
T ss_pred CCCEEEEEccCHHHH-----HHHHHHHhCCCEEEEEc
Confidence 348999998777774 57888999999998664
No 236
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=30.80 E-value=40 Score=29.31 Aligned_cols=36 Identities=17% Similarity=0.180 Sum_probs=27.0
Q ss_pred CCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 11 PRNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 11 ~~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.-..|+|+|+-.|..| ..+|+.|+++||+|++....
T Consensus 16 ~~~~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 16 YFQGMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp ---CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 3346899999766555 56899999999999998763
No 237
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=30.76 E-value=68 Score=27.31 Aligned_cols=37 Identities=14% Similarity=0.164 Sum_probs=29.1
Q ss_pred CcEEEEEcCCCCCC--hHHHHHHHHHHHhCCCeEEEEeC
Q 012563 14 GRRVILFPLPFQGH--INPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~il~~~~~~~GH--v~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+...+++.+|..|+ ..-+..+++.|.++|+.|..+--
T Consensus 26 ~~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~ 64 (251)
T 2wtm_A 26 KCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADM 64 (251)
T ss_dssp SEEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecC
Confidence 44567777888888 77788899999999999876543
No 238
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=30.71 E-value=51 Score=29.89 Aligned_cols=36 Identities=11% Similarity=0.197 Sum_probs=25.9
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 12 RNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.+.|+|++. |+.|.+ -..|++.|.++||+|+.++..
T Consensus 11 ~~~M~ilVt--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 11 GAHVKYAVL--GATGLL--GHHAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp -CCCEEEEE--STTSHH--HHHHHHHHHHTTCEEEEEECT
T ss_pred ccCCEEEEE--CCCcHH--HHHHHHHHHHCCCEEEEEecC
Confidence 345777766 444544 467889999999999999864
No 239
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=30.68 E-value=44 Score=32.09 Aligned_cols=31 Identities=19% Similarity=0.375 Sum_probs=25.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
|+|+|+-.|..| ..+|..|+++||+|+++..
T Consensus 1 mkI~VIG~G~vG-----~~~A~~la~~G~~V~~~d~ 31 (436)
T 1mv8_A 1 MRISIFGLGYVG-----AVCAGCLSARGHEVIGVDV 31 (436)
T ss_dssp CEEEEECCSTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECCCHHH-----HHHHHHHHHCCCEEEEEEC
Confidence 689999766666 5788899999999998865
No 240
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=30.57 E-value=50 Score=32.49 Aligned_cols=41 Identities=15% Similarity=0.219 Sum_probs=34.0
Q ss_pred CcEEEEEcCC---CCCChHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 012563 14 GRRVILFPLP---FQGHINPMLQLGSILYSKGFSITIIHTKFNS 54 (460)
Q Consensus 14 ~~~il~~~~~---~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~ 54 (460)
+||..|++.| +.|-=.-..+|+..|.+||++||.+--+++.
T Consensus 2 ~~k~i~vtggv~s~lgkgi~~as~g~ll~~~g~~v~~~k~dpyl 45 (535)
T 3nva_A 2 PNKYIVVTGGVLSSVGKGTLVASIGMLLKRRGYNVTAVKIDPYI 45 (535)
T ss_dssp CCEEEEEECCCSTTTTHHHHHHHHHHHHHHTTCCEEEEEEECSS
T ss_pred CceEEEEeCccccCcchHHHHHHHHHHHHHCCceEEEEecCcce
Confidence 4789999987 5577778899999999999999998875433
No 241
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=30.20 E-value=37 Score=30.79 Aligned_cols=35 Identities=17% Similarity=0.293 Sum_probs=27.3
Q ss_pred CCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 11 PRNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 11 ~~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
..+.|+|+|+-.|..| ..+|..|.+.||+|+++..
T Consensus 27 ~~~~~~I~iIG~G~mG-----~~~a~~l~~~g~~V~~~~~ 61 (316)
T 2uyy_A 27 TPTDKKIGFLGLGLMG-----SGIVSNLLKMGHTVTVWNR 61 (316)
T ss_dssp CCCSSCEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCCCeEEEEcccHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 3346899999877666 4578889999999988764
No 242
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=30.18 E-value=35 Score=30.71 Aligned_cols=32 Identities=9% Similarity=0.014 Sum_probs=27.3
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+|+|.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 15 ~~~I~vIG~G~mG-----~~~A~~l~~~G~~V~~~dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMG-----APMATRMTEWPGGVTVYDI 46 (296)
T ss_dssp CCCEEEECCSTTH-----HHHHHHHTTSTTCEEEECS
T ss_pred CCeEEEECcCHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 5799999888777 4789999999999998865
No 243
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=30.02 E-value=37 Score=31.88 Aligned_cols=40 Identities=15% Similarity=0.294 Sum_probs=29.0
Q ss_pred cccCCCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 7 SRISPRNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 7 ~~~~~~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
+.|...+.++|+|+-.|-.| +.+|..|+++|++|+++=..
T Consensus 19 ~~M~~~~~~dV~IVGaG~aG-----l~~A~~L~~~G~~v~v~E~~ 58 (398)
T 2xdo_A 19 SHMNLLSDKNVAIIGGGPVG-----LTMAKLLQQNGIDVSVYERD 58 (398)
T ss_dssp ----CCTTCEEEEECCSHHH-----HHHHHHHHTTTCEEEEEECS
T ss_pred ccccccCCCCEEEECCCHHH-----HHHHHHHHHCCCCEEEEeCC
Confidence 34555566789999877544 78899999999999998753
No 244
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=29.92 E-value=36 Score=30.37 Aligned_cols=31 Identities=23% Similarity=0.301 Sum_probs=25.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
|+|.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 2 ~~i~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 32 (287)
T 3pef_A 2 QKFGFIGLGIMG-----SAMAKNLVKAGCSVTIWNR 32 (287)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEeecHHH-----HHHHHHHHHCCCeEEEEcC
Confidence 789998766555 5789999999999998765
No 245
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=29.92 E-value=47 Score=32.35 Aligned_cols=106 Identities=14% Similarity=0.155 Sum_probs=57.1
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCC--CCCCC---CCCCC-HHHHHH
Q 012563 12 RNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNSPNSCNYPHFDFHSIS--DGLTD---PSAED-STTILI 85 (460)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~-~~~~~~ 85 (460)
+++|+-+|++. .+=.-++.+|+.|.+.|+++. .|. .-.+... ..|+.+..+. .++|+ +-..+ ......
T Consensus 7 ~~~i~~aLISV---sDK~glvelAk~L~~lGfeI~-ATg-GTak~L~-e~GI~v~~V~~vTgfPEil~GRVKTLHP~ihg 80 (523)
T 3zzm_A 7 RRPIRRALISV---YDKTGLVDLAQGLSAAGVEII-STG-STAKTIA-DTGIPVTPVEQLTGFPEVLDGRVKTLHPRVHA 80 (523)
T ss_dssp CCCCCEEEEEE---SSCTTHHHHHHHHHHTTCEEE-ECH-HHHHHHH-TTTCCCEEHHHHHSCCCCTTTTSSSCSHHHHH
T ss_pred cccccEEEEEE---eccccHHHHHHHHHHCCCEEE-Ecc-hHHHHHH-HcCCceeeccccCCCchhhCCccccCCchhhh
Confidence 34566666665 345568899999999999986 332 1111111 2456655543 12222 33344 333333
Q ss_pred HHHHhcchhHHHHHHHHhhcCCCCCCCCCCceEEEEcCcchHHH-HHh
Q 012563 86 TLNAKCMVPFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQFTH-VAD 132 (460)
Q Consensus 86 ~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~~~~-~A~ 132 (460)
..+. .....+.++++.+.... +.|+||++ ++++.. ++.
T Consensus 81 GiLa--~r~~~~h~~~l~~~~i~------~iDlVvvN-LYPF~~tv~~ 119 (523)
T 3zzm_A 81 GLLA--DLRKSEHAAALEQLGIE------AFELVVVN-LYPFSQTVES 119 (523)
T ss_dssp HHHC--CTTSHHHHHHHHHHTCC------CCSEEEEE-CCCHHHHHHT
T ss_pred hhcc--CCCCHHHHHHHHHCCCC------ceeEEEEe-CCChHHHHhc
Confidence 3321 12234455555554443 78999999 456555 653
No 246
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=29.90 E-value=61 Score=28.51 Aligned_cols=34 Identities=15% Similarity=0.103 Sum_probs=26.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+.|+++++.++.| --.++|+.|+++|++|++...
T Consensus 27 ~~k~vlVTGas~g---IG~aia~~la~~G~~V~~~~~ 60 (269)
T 4dmm_A 27 TDRIALVTGASRG---IGRAIALELAAAGAKVAVNYA 60 (269)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 3467888866543 357899999999999988765
No 247
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=29.84 E-value=61 Score=28.68 Aligned_cols=41 Identities=15% Similarity=0.225 Sum_probs=33.0
Q ss_pred CCCcEEEEEcC--CCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 012563 12 RNGRRVILFPL--PFQGHINPMLQLGSILYSKGFSITIIHTKF 52 (460)
Q Consensus 12 ~~~~~il~~~~--~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~ 52 (460)
.+++++++++. |+-|-..-...||..|+++|.+|.++-.+.
T Consensus 79 ~~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~ 121 (271)
T 3bfv_A 79 DSAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDM 121 (271)
T ss_dssp TCCCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred CCCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 34566666664 477889999999999999999999987753
No 248
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=29.57 E-value=3e+02 Score=26.93 Aligned_cols=33 Identities=21% Similarity=0.342 Sum_probs=25.0
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
..+++++. .-.-.+.|++.|.+.|.+|+.+.+.
T Consensus 360 Gkrv~i~g-----d~~~~~~la~~L~ElGm~vv~v~~~ 392 (519)
T 1qgu_B 360 GKKFGLYG-----DPDFVMGLTRFLLELGCEPTVILSH 392 (519)
T ss_dssp TCEEEEES-----CHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHCCCEEEEEEeC
Confidence 46788874 3445678888899999999987774
No 249
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=29.55 E-value=59 Score=29.25 Aligned_cols=34 Identities=15% Similarity=0.031 Sum_probs=25.0
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.|+|+++ |+.|.+ -..++++|.++||+|++++..
T Consensus 4 ~~~ilVt--GatG~i--G~~l~~~L~~~g~~V~~~~R~ 37 (321)
T 3c1o_A 4 MEKIIIY--GGTGYI--GKFMVRASLSFSHPTFIYARP 37 (321)
T ss_dssp CCCEEEE--TTTSTT--HHHHHHHHHHTTCCEEEEECC
T ss_pred ccEEEEE--cCCchh--HHHHHHHHHhCCCcEEEEECC
Confidence 3556555 555655 357889999999999999874
No 250
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=29.54 E-value=1.8e+02 Score=21.88 Aligned_cols=38 Identities=21% Similarity=0.126 Sum_probs=23.6
Q ss_pred CCeEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEE
Q 012563 272 PKSVIYVSFGSVAAINETEFLEIAWGLANSRVPFLWVV 309 (460)
Q Consensus 272 ~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~ 309 (460)
++.+|+++.||........+..+...++.....+.+.+
T Consensus 5 ~~alllv~HGS~~~~~~~~~~~l~~~l~~~~~~V~~a~ 42 (126)
T 3lyh_A 5 PHQIILLAHGSSDARWCETFEKLAEPTVESIENAAIAY 42 (126)
T ss_dssp CEEEEEEECCCSCHHHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHHHHHhhcCCEEEEE
Confidence 45899999999654233456667777754334444443
No 251
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=29.52 E-value=58 Score=29.04 Aligned_cols=35 Identities=17% Similarity=0.199 Sum_probs=26.7
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
+.|+++++.++.| =-.++|+.|+++|++|+++...
T Consensus 11 ~~k~vlITGas~G---IG~~~a~~L~~~G~~V~~~~r~ 45 (311)
T 3o26_A 11 KRRCAVVTGGNKG---IGFEICKQLSSNGIMVVLTCRD 45 (311)
T ss_dssp -CCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 4567888866543 3568999999999999998863
No 252
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=29.43 E-value=48 Score=30.68 Aligned_cols=38 Identities=24% Similarity=0.260 Sum_probs=30.7
Q ss_pred cEEEEEcC-CCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 012563 15 RRVILFPL-PFQGHINPMLQLGSILYSKGFSITIIHTKF 52 (460)
Q Consensus 15 ~~il~~~~-~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~ 52 (460)
++|+|++. |+-|-..-...||..|+++|++|.++..+.
T Consensus 26 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 64 (349)
T 3ug7_A 26 TKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDP 64 (349)
T ss_dssp CEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCT
T ss_pred CEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 34444433 477999999999999999999999999875
No 253
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=29.34 E-value=87 Score=28.19 Aligned_cols=106 Identities=8% Similarity=0.027 Sum_probs=58.9
Q ss_pred CCCCcEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCC-CCCCCCCCCceEEeCCCCCCCCCCCCHHHHHHHH
Q 012563 11 PRNGRRVILFPLPFQGHINPMLQLGSILYSK--GFSITIIHTKFN-SPNSCNYPHFDFHSISDGLTDPSAEDSTTILITL 87 (460)
Q Consensus 11 ~~~~~~il~~~~~~~GHv~p~l~lA~~L~~r--Gh~V~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (460)
..+++||+++.++. || -+.+|.....+- ..+|..+.+... ....+...|+.++.+|.... +..
T Consensus 92 ~~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~gIp~~~~~~~~~-----~r~------ 157 (292)
T 3lou_A 92 VAARPKVLIMVSKL-EH--CLADLLFRWKMGELKMDIVGIVSNHPDFAPLAAQHGLPFRHFPITAD-----TKA------ 157 (292)
T ss_dssp TTSCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSSTTHHHHHHTTCCEEECCCCSS-----CHH------
T ss_pred cCCCCEEEEEEcCC-Cc--CHHHHHHHHHcCCCCcEEEEEEeCcHHHHHHHHHcCCCEEEeCCCcC-----CHH------
Confidence 34578999888666 54 455555554432 468887776432 22223345788888774211 111
Q ss_pred HHhcchhHHHHHHHHhhcCCCCCCCCCCceEEEEcCcch-HHH-HHhhcCCCeEEEeCc
Q 012563 88 NAKCMVPFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQ-FTH-VADEFKLPTIILQTH 144 (460)
Q Consensus 88 ~~~~~~~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~-~~~-~A~~lgiP~v~~~~~ 144 (460)
..+..+.+.+++. +||+||.-.+.. -.. +-..+.-.++-+.++
T Consensus 158 --~~~~~~~~~l~~~------------~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 202 (292)
T 3lou_A 158 --QQEAQWLDVFETS------------GAELVILARYMQVLSPEASARLANRAINIHHS 202 (292)
T ss_dssp --HHHHHHHHHHHHH------------TCSEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred --HHHHHHHHHHHHh------------CCCEEEecCchhhCCHHHHhhhcCCeEEeCCC
Confidence 1112233444444 899999887652 223 555566667766554
No 254
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=29.23 E-value=37 Score=29.96 Aligned_cols=31 Identities=19% Similarity=0.309 Sum_probs=25.2
Q ss_pred EEEcCCCCCChHHHHHHHHHHHhCCCeEEEE
Q 012563 18 ILFPLPFQGHINPMLQLGSILYSKGFSITII 48 (460)
Q Consensus 18 l~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~ 48 (460)
+++.+|..|+-.-+..+|+.|+++|+.|..+
T Consensus 54 VlllHG~~~s~~~~~~la~~La~~Gy~Via~ 84 (281)
T 4fbl_A 54 VLVSHGFTGSPQSMRFLAEGFARAGYTVATP 84 (281)
T ss_dssp EEEECCTTCCGGGGHHHHHHHHHTTCEEEEC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 4455788888777889999999999998654
No 255
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=29.23 E-value=58 Score=28.45 Aligned_cols=37 Identities=14% Similarity=0.118 Sum_probs=29.8
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
....+++.+|..|+..-...+++.|.++|+.|..+--
T Consensus 45 ~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 81 (315)
T 4f0j_A 45 NGRTILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQ 81 (315)
T ss_dssp CSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECC
T ss_pred CCCeEEEEcCCCCcchHHHHHHHHHHHCCCeEEEeec
Confidence 3456666678788888899999999999999987765
No 256
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=29.23 E-value=30 Score=26.61 Aligned_cols=32 Identities=13% Similarity=0.186 Sum_probs=23.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
++|+++-. |.+ ...+++.|.+.|++|+++...
T Consensus 7 ~~v~I~G~---G~i--G~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGL---GRF--GGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CSEEEECC---SHH--HHHHHHHHHHTTCCCEEEESC
T ss_pred CcEEEECC---CHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 46887764 433 256789999999999988763
No 257
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=29.17 E-value=57 Score=26.90 Aligned_cols=34 Identities=15% Similarity=0.156 Sum_probs=24.1
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
+||++++. |+.|-+ -..+++.|. +||+|+++...
T Consensus 2 ~kM~vlVt--Gasg~i--G~~~~~~l~-~g~~V~~~~r~ 35 (202)
T 3d7l_A 2 NAMKILLI--GASGTL--GSAVKERLE-KKAEVITAGRH 35 (202)
T ss_dssp CSCEEEEE--TTTSHH--HHHHHHHHT-TTSEEEEEESS
T ss_pred CCcEEEEE--cCCcHH--HHHHHHHHH-CCCeEEEEecC
Confidence 46785544 334444 467899999 99999998763
No 258
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=28.85 E-value=68 Score=26.69 Aligned_cols=44 Identities=18% Similarity=0.279 Sum_probs=33.4
Q ss_pred ccccCCCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEe
Q 012563 6 ESRISPRNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIH 49 (460)
Q Consensus 6 ~~~~~~~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~ 49 (460)
+|+|.-.+++.|+|.-.++.|=..-...|++.|...|+.|..+.
T Consensus 1 ~~~m~~~~~~~I~l~G~~GsGKsT~~~~L~~~l~~~~~~v~~~~ 44 (215)
T 1nn5_A 1 GSHMAARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLR 44 (215)
T ss_dssp ------CCCCEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CccccccCCcEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEee
Confidence 35666667889999999999999999999999998999986553
No 259
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=28.83 E-value=20 Score=32.41 Aligned_cols=33 Identities=21% Similarity=0.358 Sum_probs=26.9
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhC-----C-CeEEEEeC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSK-----G-FSITIIHT 50 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~r-----G-h~V~~~~~ 50 (460)
.+|+|+|+-.|..|. .+|..|.++ | |+|+++..
T Consensus 7 ~~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CCEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEc
Confidence 348999998887774 668888888 9 99999865
No 260
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=28.79 E-value=72 Score=26.68 Aligned_cols=38 Identities=11% Similarity=0.088 Sum_probs=27.7
Q ss_pred CCcEEEEEcCCCCCChHHHHH-HHHHHHhCCCeEEEEeC
Q 012563 13 NGRRVILFPLPFQGHINPMLQ-LGSILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~-lA~~L~~rGh~V~~~~~ 50 (460)
+.|||+++-....|+..-+.. +++.|.+.|++|.++--
T Consensus 5 ~mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l 43 (211)
T 1ydg_A 5 APVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKV 43 (211)
T ss_dssp CCCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEec
Confidence 457888887766787766544 55777778999988764
No 261
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=28.69 E-value=55 Score=28.19 Aligned_cols=38 Identities=16% Similarity=0.242 Sum_probs=29.7
Q ss_pred hHHHHHHHHhhcCCCCCCCCCCceEEEEcCcchHHH-HHhhcCCCeEEEeC
Q 012563 94 PFRNCLAKLVSNTNNNNAQEDSVACLITDFLWQFTH-VADEFKLPTIILQT 143 (460)
Q Consensus 94 ~l~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~~~~-~A~~lgiP~v~~~~ 143 (460)
.+.+.++++.+. ++|+||.+. .+. +|+++|+|.+.+.+
T Consensus 142 e~~~~i~~l~~~---------G~~vVVG~~---~~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 142 DARGQINELKAN---------GTEAVVGAG---LITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHT---------TCCEEEESH---HHHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHC---------CCCEEECCH---HHHHHHHHcCCcEEEECC
Confidence 345577777765 799999983 345 99999999999884
No 262
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=28.66 E-value=72 Score=28.89 Aligned_cols=34 Identities=3% Similarity=-0.016 Sum_probs=25.8
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhC-C-CeEEEEeCC
Q 012563 12 RNGRRVILFPLPFQGHINPMLQLGSILYSK-G-FSITIIHTK 51 (460)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~lA~~L~~r-G-h~V~~~~~~ 51 (460)
+++|+|+++..+.. .++++.|++. | ++|.++...
T Consensus 2 m~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~ 37 (331)
T 2pn1_A 2 MQKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCS 37 (331)
T ss_dssp TTCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESC
T ss_pred CccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCC
Confidence 36789999866554 4789999886 7 888887653
No 263
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=28.65 E-value=44 Score=28.64 Aligned_cols=41 Identities=15% Similarity=0.125 Sum_probs=32.4
Q ss_pred CCcEEEEEcC--CCCCChHHHHHHHHHHHhC-CCeEEEEeCCCC
Q 012563 13 NGRRVILFPL--PFQGHINPMLQLGSILYSK-GFSITIIHTKFN 53 (460)
Q Consensus 13 ~~~~il~~~~--~~~GHv~p~l~lA~~L~~r-Gh~V~~~~~~~~ 53 (460)
++|+++.+.. |+-|-..-...||..|+++ |++|.++=.+..
T Consensus 2 ~~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 2 NAKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISLP 45 (245)
T ss_dssp -CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCTT
T ss_pred CCCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCCC
Confidence 3566665544 5779999999999999999 999999987644
No 264
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=28.65 E-value=31 Score=31.03 Aligned_cols=39 Identities=15% Similarity=0.048 Sum_probs=29.8
Q ss_pred CCcEEEEEcCCCCC----ChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 13 NGRRVILFPLPFQG----HINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 13 ~~~~il~~~~~~~G----Hv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
++|||+++..+... -+.-...++++|.++||+|..+...
T Consensus 2 ~~m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (307)
T 3r5x_A 2 NAMRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLN 44 (307)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHHHHSCTTTEEEEEEECS
T ss_pred CCcEEEEEeCCCCcchHhHHHHHHHHHHHHHHCCCEEEEEccc
Confidence 57999999965322 1344678899999999999998874
No 265
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=28.64 E-value=36 Score=30.39 Aligned_cols=31 Identities=19% Similarity=0.289 Sum_probs=25.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
|+|+|+-.|..|. .+|+.|.++||+|+++..
T Consensus 1 m~i~iiG~G~mG~-----~~a~~l~~~g~~V~~~~~ 31 (296)
T 2gf2_A 1 MPVGFIGLGNMGN-----PMAKNLMKHGYPLIIYDV 31 (296)
T ss_dssp CCEEEECCSTTHH-----HHHHHHHHTTCCEEEECS
T ss_pred CeEEEEeccHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 6899998777774 678899999999988765
No 266
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=28.57 E-value=62 Score=28.09 Aligned_cols=34 Identities=6% Similarity=-0.050 Sum_probs=26.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+.++++++.++.| --.++|+.|+++|++|+++..
T Consensus 6 ~~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r 39 (252)
T 3h7a_A 6 RNATVAVIGAGDY---IGAEIAKKFAAEGFTVFAGRR 39 (252)
T ss_dssp CSCEEEEECCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 3467777755543 357899999999999998876
No 267
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=28.23 E-value=83 Score=25.54 Aligned_cols=45 Identities=20% Similarity=0.312 Sum_probs=37.0
Q ss_pred ccccCCCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 6 ESRISPRNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 6 ~~~~~~~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+++....+++.|++.-.++.|=..-...|++.|..+|+.|.++..
T Consensus 5 ~~~~~~~~~~~i~l~G~~GsGKsT~~~~L~~~l~~~~~~~~~~~~ 49 (186)
T 2yvu_A 5 TTYKCIEKGIVVWLTGLPGSGKTTIATRLADLLQKEGYRVEVLDG 49 (186)
T ss_dssp ---CCCSCCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEH
T ss_pred ccccccCCCcEEEEEcCCCCCHHHHHHHHHHHHHhcCCeEEEeeH
Confidence 455666678889999999999999999999999999999988764
No 268
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=28.13 E-value=77 Score=26.62 Aligned_cols=33 Identities=18% Similarity=0.375 Sum_probs=24.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
|+|+++ |+.|.+ -..|++.|.++||+|+.++..
T Consensus 5 ~~ilIt--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 5 KKIVLI--GASGFV--GSALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CEEEEE--TCCHHH--HHHHHHHHHTTTCEEEEECSC
T ss_pred CEEEEE--cCCchH--HHHHHHHHHHCCCEEEEEEcC
Confidence 566655 444544 367899999999999999874
No 269
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=28.12 E-value=56 Score=28.68 Aligned_cols=42 Identities=10% Similarity=0.057 Sum_probs=31.3
Q ss_pred cccCCCCCcEEEEEcCC--CCCChHHHHHHHHHHHhCCCeEEEEe
Q 012563 7 SRISPRNGRRVILFPLP--FQGHINPMLQLGSILYSKGFSITIIH 49 (460)
Q Consensus 7 ~~~~~~~~~~il~~~~~--~~GHv~p~l~lA~~L~~rGh~V~~~~ 49 (460)
++++. ++|+.++++.. ..|=..-.+.|++.|+++|++|.++=
T Consensus 19 ~~~~~-~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fK 62 (251)
T 3fgn_A 19 NLYFQ-SHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCK 62 (251)
T ss_dssp ---CC-SSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHhcc-cCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Confidence 34443 56777766655 45888899999999999999999975
No 270
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=28.10 E-value=2.4e+02 Score=22.88 Aligned_cols=138 Identities=14% Similarity=0.168 Sum_probs=77.3
Q ss_pred eEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEECCCCCCCchhhccCchhHHhhhCCCceEEeccchHHHhccCCCc
Q 012563 274 SVIYVSFGSVAAINETEFLEIAWGLANSRVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPAVG 353 (460)
Q Consensus 274 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~~~ 353 (460)
+.|-|-+||.. +....+.....|+..+.++-..+... ...|+.+.+ |+.... -...++
T Consensus 7 ~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa--------HR~p~~~~~----------~~~~a~-~~g~~V- 64 (169)
T 3trh_A 7 IFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILSA--------HRTPKETVE----------FVENAD-NRGCAV- 64 (169)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTSHHHHHH----------HHHHHH-HTTEEE-
T ss_pred CcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcc--------cCCHHHHHH----------HHHHHH-hCCCcE-
Confidence 55666677765 45677888888988888876655443 225555521 111100 122344
Q ss_pred ceeeccCchhhHHHHhh---CCCeeecCcccchh-hHHHHH--HH--hhcee--Ee-eC--CccCHHHHHHHHHHHhccc
Q 012563 354 GFLTHSGWNSTLESICE---GVPMICQPCLADQM-VNARYV--SH--VWRVG--LH-LE--GKLEKKEIETAIRRLMVEA 420 (460)
Q Consensus 354 ~~I~HGG~~s~~eal~~---GvP~v~~P~~~DQ~-~na~~v--~~--~lG~G--~~-~~--~~~~~~~l~~~i~~ll~~~ 420 (460)
||.=+|...-+-++.+ -+|+|.+|...-.. .....+ .+ . |+. .. ++ ...+...++..|- -+.|
T Consensus 65 -iIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~-GvPVatV~I~~a~~~nAa~lAa~Il-~~~d- 140 (169)
T 3trh_A 65 -FIAAAGLAAHLAGTIAAHTLKPVIGVPMAGGSLGGLDALLSTVQMPG-GVPVACTAIGKAGAKNAAILAAQII-ALQD- 140 (169)
T ss_dssp -EEEEECSSCCHHHHHHHTCSSCEEEEECCCSTTTTHHHHHHHHCCCT-TSCCEECCSTHHHHHHHHHHHHHHH-HTTC-
T ss_pred -EEEECChhhhhHHHHHhcCCCCEEEeecCCCCCCCHHHHHHhhcCCC-CCceEEEecCCccchHHHHHHHHHH-cCCC-
Confidence 8888886444444333 46999999863221 112222 22 2 442 22 12 1234555555553 3456
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 012563 421 EGQEMRERITCLKKNVDAC 439 (460)
Q Consensus 421 ~~~~~~~~a~~l~~~~~~~ 439 (460)
..++++.+.+++.+++.
T Consensus 141 --~~l~~kl~~~r~~~~~~ 157 (169)
T 3trh_A 141 --KSIAQKLVQQRTAKRET 157 (169)
T ss_dssp --HHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHH
Confidence 78999999999888854
No 271
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=28.08 E-value=63 Score=28.84 Aligned_cols=34 Identities=18% Similarity=0.162 Sum_probs=25.1
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
+|+|+++ |+.|.+ -..+++.|.++||+|+.++..
T Consensus 4 ~~~ilVt--GatG~i--G~~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 4 KSRVLIV--GGTGYI--GKRIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp CCCEEEE--STTSTT--HHHHHHHHHHTTCCEEEECCS
T ss_pred CCEEEEE--cCCcHH--HHHHHHHHHhCCCcEEEEECC
Confidence 4566665 455555 357889999999999998874
No 272
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=28.00 E-value=37 Score=30.94 Aligned_cols=32 Identities=3% Similarity=0.029 Sum_probs=27.2
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCC-CeEEEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKG-FSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rG-h~V~~~~~~ 51 (460)
|+|+|+-.|..| ..+|..|+++| |+|+++...
T Consensus 25 m~IgvIG~G~mG-----~~lA~~L~~~G~~~V~~~dr~ 57 (317)
T 4ezb_A 25 TTIAFIGFGEAA-----QSIAGGLGGRNAARLAAYDLR 57 (317)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHTTTCSEEEEECGG
T ss_pred CeEEEECccHHH-----HHHHHHHHHcCCCeEEEEeCC
Confidence 789999877666 78899999999 999988653
No 273
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=28.00 E-value=43 Score=30.09 Aligned_cols=32 Identities=13% Similarity=0.346 Sum_probs=26.8
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
-|||+|+-.|..|. .+|+.|.++||+|+++..
T Consensus 3 m~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~d~ 34 (302)
T 2h78_A 3 MKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (302)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCEEEEEeecHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 37899998887774 789999999999998865
No 274
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=27.93 E-value=75 Score=25.42 Aligned_cols=36 Identities=17% Similarity=0.230 Sum_probs=27.1
Q ss_pred cEEEEEcCCCCCChHHHH-HHHHHHHhCCCeEEEEeC
Q 012563 15 RRVILFPLPFQGHINPML-QLGSILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l-~lA~~L~~rGh~V~~~~~ 50 (460)
|+|+++-+...|+..-+. .+++.|.+.|++|.++--
T Consensus 1 Mkv~IvY~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~ 37 (161)
T 3hly_A 1 MSVLIGYLSDYGYSDRLSQAIGRGLVKTGVAVEMVDL 37 (161)
T ss_dssp -CEEEEECTTSTTHHHHHHHHHHHHHHTTCCEEEEET
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEEC
Confidence 677777777788887755 467888888998887754
No 275
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=27.72 E-value=62 Score=28.17 Aligned_cols=33 Identities=18% Similarity=0.170 Sum_probs=25.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
.+.++++.++.| --.++|+.|+++|++|+++..
T Consensus 21 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 53 (253)
T 2nm0_A 21 SRSVLVTGGNRG---IGLAIARAFADAGDKVAITYR 53 (253)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 356777755443 356899999999999998876
No 276
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=27.72 E-value=81 Score=27.61 Aligned_cols=34 Identities=15% Similarity=0.032 Sum_probs=26.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+.|+++++.++.| --.++|+.|+++|++|++...
T Consensus 17 ~~k~~lVTGas~g---IG~aia~~l~~~G~~V~~~~~ 50 (270)
T 3is3_A 17 DGKVALVTGSGRG---IGAAVAVHLGRLGAKVVVNYA 50 (270)
T ss_dssp TTCEEEESCTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 4578888866543 357899999999999998764
No 277
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=27.72 E-value=85 Score=27.20 Aligned_cols=30 Identities=0% Similarity=-0.043 Sum_probs=20.8
Q ss_pred CceEEEEcCcchH-HH-HHhhcCCCeEEEeCc
Q 012563 115 SVACLITDFLWQF-TH-VADEFKLPTIILQTH 144 (460)
Q Consensus 115 ~pDlvI~D~~~~~-~~-~A~~lgiP~v~~~~~ 144 (460)
+||+||....... .. .-++.|||++.+...
T Consensus 60 ~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~~ 91 (260)
T 2q8p_A 60 KPTHVLSVSTIKDEMQPFYKQLNMKGYFYDFD 91 (260)
T ss_dssp CCSEEEEEGGGHHHHHHHHHHHTSCCEEECCS
T ss_pred CCCEEEecCccCHHHHHHHHHcCCcEEEecCC
Confidence 8999998654322 22 556689999987654
No 278
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=27.67 E-value=86 Score=27.10 Aligned_cols=34 Identities=15% Similarity=0.151 Sum_probs=25.6
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+.|+++++.++.| --.++|+.|+++|++|+++..
T Consensus 11 ~~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 44 (252)
T 3f1l_A 11 NDRIILVTGASDG---IGREAAMTYARYGATVILLGR 44 (252)
T ss_dssp TTCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 3467777755543 356899999999999988875
No 279
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=27.61 E-value=76 Score=29.10 Aligned_cols=33 Identities=9% Similarity=0.051 Sum_probs=24.4
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
.+|||+|+. --+....+.+.|.++||+|..+.+
T Consensus 21 ~~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt 53 (329)
T 2bw0_A 21 QSMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFT 53 (329)
T ss_dssp CCCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEe
Confidence 459999992 224444577899999999987776
No 280
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=27.60 E-value=1.1e+02 Score=24.84 Aligned_cols=37 Identities=14% Similarity=0.047 Sum_probs=29.5
Q ss_pred CcEEEEEcCCCCCChHHHHH--HHHHHHhCCCeEEEEeC
Q 012563 14 GRRVILFPLPFQGHINPMLQ--LGSILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~--lA~~L~~rGh~V~~~~~ 50 (460)
+...+++.+|..|+..-... +++.|.++|+.|..+-.
T Consensus 31 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 69 (210)
T 1imj_A 31 ARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDL 69 (210)
T ss_dssp CSCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECC
T ss_pred CCceEEEECCCCCccceeecchhHHHHHHCCCeEEEecC
Confidence 45567777788888888888 59999999999887654
No 281
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=27.53 E-value=33 Score=30.39 Aligned_cols=39 Identities=8% Similarity=-0.084 Sum_probs=35.7
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHH--------HHhC-CCeEEEEeCC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSI--------LYSK-GFSITIIHTK 51 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~--------L~~r-Gh~V~~~~~~ 51 (460)
++.+|++.+.++-.|-....-++.. |.++ |++|+..+..
T Consensus 119 ~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~ 166 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQ 166 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSS
T ss_pred CCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCC
Confidence 5789999999999999999999988 9999 9999999874
No 282
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=27.43 E-value=37 Score=27.74 Aligned_cols=34 Identities=12% Similarity=-0.011 Sum_probs=25.9
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhC-CCeEEEEeCC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSK-GFSITIIHTK 51 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~r-Gh~V~~~~~~ 51 (460)
.++||+++-.|.. ...+|+.|.++ ||+|+++..+
T Consensus 38 ~~~~v~IiG~G~~-----G~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 38 GHAQVLILGMGRI-----GTGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp TTCSEEEECCSHH-----HHHHHHHHHHHHCSCEEEEESC
T ss_pred CCCcEEEECCCHH-----HHHHHHHHHhccCCeEEEEECC
Confidence 4678999854433 36778999999 9999998764
No 283
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=27.35 E-value=41 Score=31.39 Aligned_cols=33 Identities=12% Similarity=0.117 Sum_probs=26.6
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+.|+|+|+-.|..| ..+|+.|+++||+|+++..
T Consensus 21 ~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr 53 (358)
T 4e21_A 21 QSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDL 53 (358)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred cCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 35899999766555 5789999999999998865
No 284
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=27.33 E-value=17 Score=32.74 Aligned_cols=33 Identities=15% Similarity=0.023 Sum_probs=27.5
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.|||+|+-.|+.|- .+|..|.++||+|+++...
T Consensus 2 ~mkI~iiGaGa~G~-----~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 2 SLSVAIIGPGAVGT-----TIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp -CCEEEECCSHHHH-----HHHHHHHHHCTTCEEEESS
T ss_pred CcEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEec
Confidence 37999998888774 6788899999999999874
No 285
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A
Probab=27.20 E-value=59 Score=27.76 Aligned_cols=34 Identities=29% Similarity=0.421 Sum_probs=27.2
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEe
Q 012563 16 RVILFPLPFQGHINPMLQLGSILYSKGFSITIIH 49 (460)
Q Consensus 16 ~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~ 49 (460)
..+++-+|..|+..-...+++.|.++|++|+.+-
T Consensus 17 ~~vvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D 50 (247)
T 1tqh_A 17 RAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPI 50 (247)
T ss_dssp CEEEEECCTTCCTHHHHHHHHHHHHTTCEEEECC
T ss_pred cEEEEECCCCCChHHHHHHHHHHHHCCCEEEecc
Confidence 4566677888888888899999999999886553
No 286
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=27.17 E-value=57 Score=29.04 Aligned_cols=33 Identities=12% Similarity=0.106 Sum_probs=24.2
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
|+|+++ |+.|.+ -..+++.|.++||+|+.++..
T Consensus 3 ~~vlVt--GatG~i--G~~l~~~L~~~g~~V~~~~R~ 35 (307)
T 2gas_A 3 NKILIL--GPTGAI--GRHIVWASIKAGNPTYALVRK 35 (307)
T ss_dssp CCEEEE--STTSTT--HHHHHHHHHHHTCCEEEEECC
T ss_pred cEEEEE--CCCchH--HHHHHHHHHhCCCcEEEEECC
Confidence 455554 555655 356889999999999998874
No 287
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=27.17 E-value=99 Score=29.09 Aligned_cols=89 Identities=11% Similarity=0.114 Sum_probs=43.3
Q ss_pred hhhhhccCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEECCCCCCCchhhccCchhHHhhhCCCceEEeccc
Q 012563 263 SISWLDKQAPKSVIYVSFGSVAAINETEFLEIAWGLANSRVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAP 342 (460)
Q Consensus 263 l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp 342 (460)
+.+++...+ +.++.|+-.+... .....+.+.|++ +..+++..-... +..+.+.+
T Consensus 44 l~~~l~~~g-~r~liVtd~~~~~---~~~~~v~~~L~~-g~~~~~~~~~~~--------p~~~~v~~------------- 97 (387)
T 3uhj_A 44 LAAYLAPLG-KRALVLIDRVLFD---ALSERIGKSCGD-SLDIRFERFGGE--------CCTSEIER------------- 97 (387)
T ss_dssp THHHHGGGC-SEEEEEECTTTHH---HHHHHC-------CCEEEEEECCSS--------CSHHHHHH-------------
T ss_pred HHHHHHHcC-CEEEEEECchHHH---HHHHHHHHHHHc-CCCeEEEEcCCC--------CCHHHHHH-------------
Confidence 444554433 5666666544332 256667888887 776643322111 01122210
Q ss_pred hHHHhc--cCCCcceeeccCchhhHHH-----HhhCCCeeecCcc
Q 012563 343 QQQVLA--HPAVGGFLTHSGWNSTLES-----ICEGVPMICQPCL 380 (460)
Q Consensus 343 ~~~lL~--~~~~~~~I~HGG~~s~~ea-----l~~GvP~v~~P~~ 380 (460)
-.+.+. .+++ +|.=|| ||+..+ ...|+|+|.+|..
T Consensus 98 ~~~~~~~~~~d~--IIavGG-Gs~~D~AK~iA~~~~~p~i~IPTT 139 (387)
T 3uhj_A 98 VRKVAIEHGSDI--LVGVGG-GKTADTAKIVAIDTGARIVIAPTI 139 (387)
T ss_dssp HHHHHHHHTCSE--EEEESS-HHHHHHHHHHHHHTTCEEEECCSS
T ss_pred HHHHHhhcCCCE--EEEeCC-cHHHHHHHHHHHhcCCCEEEecCc
Confidence 011122 3555 999998 444433 5579999999995
No 288
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=27.06 E-value=94 Score=28.32 Aligned_cols=31 Identities=3% Similarity=0.153 Sum_probs=22.0
Q ss_pred CceEEEEcCcchHHH-HHhhcCCCeEEEeCcc
Q 012563 115 SVACLITDFLWQFTH-VADEFKLPTIILQTHS 145 (460)
Q Consensus 115 ~pDlvI~D~~~~~~~-~A~~lgiP~v~~~~~~ 145 (460)
+||+||......... --++.|||++.+....
T Consensus 116 ~PDLIi~~~~~~~~~~~L~~~gipvv~~~~~~ 147 (335)
T 4hn9_A 116 TPDVVFLPMKLKKTADTLESLGIKAVVVNPED 147 (335)
T ss_dssp CCSEEEEEGGGHHHHHHHHHTTCCEEEECCCS
T ss_pred CCCEEEEeCcchhHHHHHHHcCCCEEEEcCCC
Confidence 899999976533333 4457899999986543
No 289
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=27.04 E-value=61 Score=28.34 Aligned_cols=38 Identities=16% Similarity=0.213 Sum_probs=30.7
Q ss_pred CCcEEEEEcCC--CCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 13 NGRRVILFPLP--FQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 13 ~~~~il~~~~~--~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
++++++.+..+ +-|-..-...||..|+ +|++|.++=.+
T Consensus 25 ~~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D 64 (267)
T 3k9g_A 25 KKPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDMD 64 (267)
T ss_dssp -CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEEC
T ss_pred CCCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEECC
Confidence 45677777655 6688899999999999 99999998765
No 290
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=26.94 E-value=48 Score=29.90 Aligned_cols=30 Identities=17% Similarity=0.429 Sum_probs=24.9
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 16 RVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 16 ~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
||.|+-.|.+| .++|+.|.++||+|+++-.
T Consensus 7 kIgfIGLG~MG-----~~mA~~L~~~G~~V~v~dr 36 (297)
T 4gbj_A 7 KIAFLGLGNLG-----TPIAEILLEAGYELVVWNR 36 (297)
T ss_dssp EEEEECCSTTH-----HHHHHHHHHTTCEEEEC--
T ss_pred cEEEEecHHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 79999988887 4799999999999998643
No 291
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=26.80 E-value=45 Score=29.46 Aligned_cols=31 Identities=16% Similarity=0.204 Sum_probs=24.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
|+|+|+-.|..| ..+|+.|.+.||+|+++..
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~~ 31 (279)
T 2f1k_A 1 MKIGVVGLGLIG-----ASLAGDLRRRGHYLIGVSR 31 (279)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEcCcHHH-----HHHHHHHHHCCCEEEEEEC
Confidence 688888766555 4678999999999988754
No 292
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=26.48 E-value=1.7e+02 Score=22.52 Aligned_cols=37 Identities=14% Similarity=0.347 Sum_probs=27.1
Q ss_pred cEEEEEcCCCCCChHHHH-HHHHHHHhCCCeEEEEeCC
Q 012563 15 RRVILFPLPFQGHINPML-QLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l-~lA~~L~~rGh~V~~~~~~ 51 (460)
|+|+++-....|+..-+. .|++.|.++|++|.++...
T Consensus 2 ~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 39 (148)
T 3f6r_A 2 SKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAA 39 (148)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETT
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehh
Confidence 467777666778876544 4677888889999988764
No 293
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=26.48 E-value=96 Score=26.86 Aligned_cols=32 Identities=9% Similarity=-0.109 Sum_probs=23.4
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 16 RVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 16 ~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+.++++.++ |- --..+++.|.++|++|+++..
T Consensus 15 k~vlITGas-gg--iG~~la~~l~~~G~~V~~~~r 46 (266)
T 1xq1_A 15 KTVLVTGGT-KG--IGHAIVEEFAGFGAVIHTCAR 46 (266)
T ss_dssp CEEEETTTT-SH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CH--HHHHHHHHHHHCCCEEEEEeC
Confidence 456666443 32 356889999999999998876
No 294
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=26.44 E-value=1.1e+02 Score=25.41 Aligned_cols=35 Identities=20% Similarity=0.322 Sum_probs=26.9
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 17 VILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 17 il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
|+++..+...+-.....+++.|++.|++|.+++-.
T Consensus 110 iil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G 144 (192)
T 2x5n_A 110 VAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIG 144 (192)
T ss_dssp EEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEES
T ss_pred EEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeC
Confidence 45555555556777889999999999999998764
No 295
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=26.41 E-value=31 Score=32.28 Aligned_cols=32 Identities=9% Similarity=0.056 Sum_probs=24.7
Q ss_pred HHhccCCCcceeeccCchhhHHHHhh----CCCeeecC
Q 012563 345 QVLAHPAVGGFLTHSGWNSTLESICE----GVPMICQP 378 (460)
Q Consensus 345 ~lL~~~~~~~~I~HGG~~s~~eal~~----GvP~v~~P 378 (460)
++-..+++ +|+=||-||++.|... ++|++.+=
T Consensus 104 ~~~~~~Dl--vI~lGGDGT~L~aa~~~~~~~~PvlGiN 139 (365)
T 3pfn_A 104 DISNQIDF--IICLGGDGTLLYASSLFQGSVPPVMAFH 139 (365)
T ss_dssp CCTTTCSE--EEEESSTTHHHHHHHHCSSSCCCEEEEE
T ss_pred hcccCCCE--EEEEcChHHHHHHHHHhccCCCCEEEEc
Confidence 34456677 9999999999999773 57888753
No 296
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=26.38 E-value=83 Score=27.64 Aligned_cols=34 Identities=15% Similarity=0.075 Sum_probs=26.5
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+.|+++++.++.| --.++|+.|+++|++|+++..
T Consensus 27 ~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 60 (270)
T 3ftp_A 27 DKQVAIVTGASRG---IGRAIALELARRGAMVIGTAT 60 (270)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 4578888865542 357899999999999988775
No 297
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=26.24 E-value=42 Score=30.66 Aligned_cols=39 Identities=13% Similarity=0.251 Sum_probs=23.8
Q ss_pred cCCCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 9 ISPRNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 9 ~~~~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
....++|+|+|. |+.|.+ -..|++.|.++||+|+.+...
T Consensus 14 ~~~~~~~~vlVt--GatG~i--G~~l~~~L~~~G~~V~~~~r~ 52 (347)
T 4id9_A 14 LVPRGSHMILVT--GSAGRV--GRAVVAALRTQGRTVRGFDLR 52 (347)
T ss_dssp -------CEEEE--TTTSHH--HHHHHHHHHHTTCCEEEEESS
T ss_pred ccccCCCEEEEE--CCCChH--HHHHHHHHHhCCCEEEEEeCC
Confidence 344445666655 455544 357889999999999999864
No 298
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=26.24 E-value=96 Score=26.45 Aligned_cols=78 Identities=6% Similarity=-0.071 Sum_probs=42.4
Q ss_pred eEEeccch-HH-HhccCCCcceeeccCchhhHHHH---------hhCCCeeecCc--ccchhh-HHHHHHHhhceeE--e
Q 012563 336 YIVQWAPQ-QQ-VLAHPAVGGFLTHSGWNSTLESI---------CEGVPMICQPC--LADQMV-NARYVSHVWRVGL--H 399 (460)
Q Consensus 336 ~~~~~vp~-~~-lL~~~~~~~~I~HGG~~s~~eal---------~~GvP~v~~P~--~~DQ~~-na~~v~~~lG~G~--~ 399 (460)
.++...+. .. +...++ ..++--||.||+-|.. .+++|++++-. +.|... +-+.+.+. |.=- .
T Consensus 90 ~~~~~~~~Rk~~~~~~sd-a~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~gfw~~l~~~l~~~~~~-Gfi~~~~ 167 (216)
T 1ydh_A 90 RVVADMHERKAAMAQEAE-AFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEE-GFIKPGA 167 (216)
T ss_dssp EEESSHHHHHHHHHHHCS-EEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECGGGTTHHHHHHHHHHHHT-TSSCHHH
T ss_pred cccCCHHHHHHHHHHhCC-EEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHHC-CCCChHH
Confidence 44444443 22 444555 3567789999988876 46999999864 233222 22344432 4210 0
Q ss_pred eCC---ccCHHHHHHHHHH
Q 012563 400 LEG---KLEKKEIETAIRR 415 (460)
Q Consensus 400 ~~~---~~~~~~l~~~i~~ 415 (460)
.+. .-+++++.+.|.+
T Consensus 168 ~~~~~~~d~~ee~~~~l~~ 186 (216)
T 1ydh_A 168 RNIVVSAPTAKELMEKMEE 186 (216)
T ss_dssp HTTEEEESSHHHHHHHHHH
T ss_pred cCeEEEeCCHHHHHHHHHH
Confidence 011 2367777777664
No 299
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=26.23 E-value=70 Score=27.55 Aligned_cols=38 Identities=11% Similarity=0.099 Sum_probs=30.4
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
++..++++.+|..|+..-+..+++.|.++|+.|..+--
T Consensus 40 ~~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 77 (303)
T 3pe6_A 40 TPKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDH 77 (303)
T ss_dssp CCSEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECC
T ss_pred CCCeEEEEECCCCchhhHHHHHHHHHHhCCCcEEEeCC
Confidence 34567777778888888888999999999999877754
No 300
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=26.21 E-value=44 Score=30.71 Aligned_cols=38 Identities=8% Similarity=0.076 Sum_probs=28.3
Q ss_pred CCcEEEEEcCCCCCCh----HHHHHHHHHHHhCCCeEEEEeC
Q 012563 13 NGRRVILFPLPFQGHI----NPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv----~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+||||+++..|..+-. .-...++++|.+.||+|+.+..
T Consensus 2 ~~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~ 43 (343)
T 1e4e_A 2 NRIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGI 43 (343)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CCcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEE
Confidence 3789999985433322 2567789999999999999875
No 301
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=26.18 E-value=1.3e+02 Score=21.49 Aligned_cols=34 Identities=12% Similarity=0.128 Sum_probs=25.7
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+..+|+++|.. | ......+..|.+.|++|..+..
T Consensus 55 ~~~~ivvyC~~--g--~rs~~a~~~L~~~G~~v~~l~G 88 (100)
T 3foj_A 55 DNETYYIICKA--G--GRSAQVVQYLEQNGVNAVNVEG 88 (100)
T ss_dssp TTSEEEEECSS--S--HHHHHHHHHHHTTTCEEEEETT
T ss_pred CCCcEEEEcCC--C--chHHHHHHHHHHCCCCEEEecc
Confidence 44688888844 3 4577888999999998887654
No 302
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=26.14 E-value=1e+02 Score=25.96 Aligned_cols=38 Identities=11% Similarity=0.135 Sum_probs=26.6
Q ss_pred CCCcEEEEEcCCCCCC----hHHHHHHHHHHHhCCCeEEEEeC
Q 012563 12 RNGRRVILFPLPFQGH----INPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 12 ~~~~~il~~~~~~~GH----v~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
..+++|.+++... +. ..-...|++.|+++|+.|+.-..
T Consensus 20 ~~~~~v~Vfggs~-~~~~~~~~~A~~lg~~La~~g~~lV~GGG 61 (199)
T 3qua_A 20 DRQWAVCVYCASG-PTHPELLELAAEVGSSIAARGWTLVSGGG 61 (199)
T ss_dssp -CCCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCB
T ss_pred CCCCEEEEEECCC-CCCHHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 4457899998655 43 34567888899999998765443
No 303
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=26.13 E-value=55 Score=28.20 Aligned_cols=37 Identities=24% Similarity=0.151 Sum_probs=31.4
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+..++++.+|..|+..-+..+++.|+++|+.|..+-.
T Consensus 48 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~ 84 (258)
T 2fx5_A 48 RHPVILWGNGTGAGPSTYAGLLSHWASHGFVVAAAET 84 (258)
T ss_dssp CEEEEEEECCTTCCGGGGHHHHHHHHHHTCEEEEECC
T ss_pred CceEEEEECCCCCCchhHHHHHHHHHhCCeEEEEecC
Confidence 5567888888888888899999999999998887654
No 304
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=26.11 E-value=78 Score=29.72 Aligned_cols=43 Identities=16% Similarity=-0.006 Sum_probs=25.0
Q ss_pred hhhhhccCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCCEEE
Q 012563 263 SISWLDKQAPKSVIYVSFGSVAAINETEFLEIAWGLANSRVPFLW 307 (460)
Q Consensus 263 l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~ 307 (460)
+.+++...+.+.++.|+-++... ......+.+.|++.+..+.+
T Consensus 22 l~~~~~~~g~~~~liVtd~~~~~--~g~~~~v~~~L~~~gi~~~~ 64 (383)
T 3ox4_A 22 AIKDLNGSGFKNALIVSDAFMNK--SGVVKQVADLLKAQGINSAV 64 (383)
T ss_dssp HHHTTTTSCCCEEEEEEEHHHHH--TTHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHcCCCEEEEEECCchhh--CchHHHHHHHHHHcCCeEEE
Confidence 34455444445666676654322 12567788888877766543
No 305
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=26.05 E-value=59 Score=30.37 Aligned_cols=40 Identities=10% Similarity=0.070 Sum_probs=32.9
Q ss_pred CCCcEEEEEcC--CCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 12 RNGRRVILFPL--PFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 12 ~~~~~il~~~~--~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.++++++.+.. |+-|-..-...||..|+++|++|.++--+
T Consensus 140 ~~~~kvIav~s~KGGvGKTT~a~nLA~~La~~g~rVlliD~D 181 (373)
T 3fkq_A 140 NDKSSVVIFTSPCGGVGTSTVAAACAIAHANMGKKVFYLNIE 181 (373)
T ss_dssp TTSCEEEEEECSSTTSSHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCCceEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 34566666654 57799999999999999999999999865
No 306
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=25.99 E-value=76 Score=23.48 Aligned_cols=27 Identities=11% Similarity=0.122 Sum_probs=22.1
Q ss_pred CCChHHHHHHHHHHHhC-CC-eEEEEeCC
Q 012563 25 QGHINPMLQLGSILYSK-GF-SITIIHTK 51 (460)
Q Consensus 25 ~GHv~p~l~lA~~L~~r-Gh-~V~~~~~~ 51 (460)
.......+.+|..+.+. || +|.++...
T Consensus 15 ~~~~~~al~~a~~~~~~~g~~~v~vff~~ 43 (117)
T 1jx7_A 15 SESLFNSLRLAIALREQESNLDLRLFLMS 43 (117)
T ss_dssp CSHHHHHHHHHHHHHHHCTTCEEEEEECG
T ss_pred cHHHHHHHHHHHHHHhcCCCccEEEEEEc
Confidence 34566789999999999 99 99888874
No 307
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=25.94 E-value=65 Score=28.38 Aligned_cols=51 Identities=8% Similarity=0.017 Sum_probs=30.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhC-CCeEEEEeCCCCCCCCCCCCCceEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSK-GFSITIIHTKFNSPNSCNYPHFDFHSIS 69 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~r-Gh~V~~~~~~~~~~~~~~~~~~~~~~~~ 69 (460)
|+|++. |+.|.+- ..+++.|.++ ||+|+.++............+++++...
T Consensus 1 M~ilVt--GatG~iG--~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D 52 (289)
T 3e48_A 1 MNIMLT--GATGHLG--THITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLD 52 (289)
T ss_dssp CCEEEE--TTTSHHH--HHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECC
T ss_pred CEEEEE--cCCchHH--HHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcC
Confidence 566654 5556553 4677779888 9999999874322111112456665543
No 308
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=25.83 E-value=65 Score=29.11 Aligned_cols=36 Identities=17% Similarity=0.272 Sum_probs=25.1
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 12 RNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
+..|+|++. |+.|-+ -..|++.|.++||+|+.+...
T Consensus 12 ~~~~~vlVT--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 47 (335)
T 1rpn_A 12 SMTRSALVT--GITGQD--GAYLAKLLLEKGYRVHGLVAR 47 (335)
T ss_dssp ---CEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCeEEEE--CCCChH--HHHHHHHHHHCCCeEEEEeCC
Confidence 345777665 455544 467899999999999998864
No 309
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=25.79 E-value=34 Score=31.12 Aligned_cols=34 Identities=12% Similarity=0.087 Sum_probs=26.4
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCC-eEEEEeC
Q 012563 12 RNGRRVILFPLPFQGHINPMLQLGSILYSKGF-SITIIHT 50 (460)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh-~V~~~~~ 50 (460)
.+.|+|+|+-.|..| ..+|+.|+++|| +|+++..
T Consensus 22 ~~~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr 56 (312)
T 3qsg_A 22 SNAMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDA 56 (312)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECS
T ss_pred CCCCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcC
Confidence 345899999877666 588999999999 9988766
No 310
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=25.78 E-value=55 Score=29.38 Aligned_cols=36 Identities=14% Similarity=0.120 Sum_probs=24.8
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.+++.++++ |+.|-+ -..|++.|.++||+|+.+...
T Consensus 10 ~~~~~vlVT-GatG~i--G~~l~~~L~~~G~~V~~~~r~ 45 (321)
T 2pk3_A 10 HGSMRALIT-GVAGFV--GKYLANHLTEQNVEVFGTSRN 45 (321)
T ss_dssp ---CEEEEE-TTTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred cCcceEEEE-CCCChH--HHHHHHHHHHCCCEEEEEecC
Confidence 345556666 555554 467899999999999998864
No 311
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=25.66 E-value=84 Score=25.33 Aligned_cols=27 Identities=22% Similarity=0.206 Sum_probs=20.5
Q ss_pred EEEEEecccccCCHHHHHHHHHHHHhC
Q 012563 275 VIYVSFGSVAAINETEFLEIAWGLANS 301 (460)
Q Consensus 275 ~v~vs~GS~~~~~~~~~~~~~~al~~~ 301 (460)
+.|+++||....+.+.+...+..+.+.
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~ 28 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDI 28 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTS
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcC
Confidence 579999999865566677777777764
No 312
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=25.55 E-value=42 Score=32.73 Aligned_cols=34 Identities=15% Similarity=0.197 Sum_probs=28.1
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
..|||.++-.|..| +.+|..|+++||+|+++-..
T Consensus 7 ~~~~I~VIG~G~vG-----~~lA~~la~~G~~V~~~d~~ 40 (478)
T 2y0c_A 7 GSMNLTIIGSGSVG-----LVTGACLADIGHDVFCLDVD 40 (478)
T ss_dssp CCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCceEEEECcCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 46999999777666 57899999999999998653
No 313
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=25.54 E-value=1.1e+02 Score=27.91 Aligned_cols=34 Identities=18% Similarity=0.191 Sum_probs=25.2
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
++|||+|+-.+ .......+.|.++||+|..+.+.
T Consensus 6 ~~mrivf~Gt~-----~fa~~~L~~L~~~~~~v~~Vvt~ 39 (318)
T 3q0i_A 6 QSLRIVFAGTP-----DFAARHLAALLSSEHEIIAVYTQ 39 (318)
T ss_dssp -CCEEEEECCS-----HHHHHHHHHHHTSSSEEEEEECC
T ss_pred cCCEEEEEecC-----HHHHHHHHHHHHCCCcEEEEEcC
Confidence 57999998765 33445567888899999888774
No 314
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=25.52 E-value=91 Score=28.36 Aligned_cols=35 Identities=20% Similarity=0.184 Sum_probs=25.4
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 12 RNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
+++|||+|+..+. ......+.|.++||+|..+.+.
T Consensus 1 s~~mrIvf~Gt~~-----fa~~~L~~L~~~~~~i~~Vvt~ 35 (314)
T 1fmt_A 1 SESLRIIFAGTPD-----FAARHLDALLSSGHNVVGVFTQ 35 (314)
T ss_dssp CCCCEEEEEECSH-----HHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCEEEEEecCH-----HHHHHHHHHHHCCCcEEEEEeC
Confidence 3579999998654 2345557777789999877774
No 315
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=25.45 E-value=1.1e+02 Score=27.31 Aligned_cols=38 Identities=16% Similarity=0.098 Sum_probs=23.7
Q ss_pred CCCcEEEEEc-CCCCCChHH--HHHHHHHHHhCCCeEEEEe
Q 012563 12 RNGRRVILFP-LPFQGHINP--MLQLGSILYSKGFSITIIH 49 (460)
Q Consensus 12 ~~~~~il~~~-~~~~GHv~p--~l~lA~~L~~rGh~V~~~~ 49 (460)
.+.||||++- +|-..-++- .-.+.+.|.++||+|+++-
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~D 60 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSD 60 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 4568887764 343333433 2345678888999999874
No 316
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=25.44 E-value=18 Score=18.72 Aligned_cols=17 Identities=24% Similarity=0.583 Sum_probs=13.8
Q ss_pred CchhhHHHHhhCCCeee
Q 012563 360 GWNSTLESICEGVPMIC 376 (460)
Q Consensus 360 G~~s~~eal~~GvP~v~ 376 (460)
|.|+++..|+.|.|.++
T Consensus 1 giGa~LKVLa~~LP~li 17 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALI 17 (26)
T ss_pred CchHHHHHHHccchHHH
Confidence 67888888888888765
No 317
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=25.42 E-value=32 Score=30.14 Aligned_cols=29 Identities=24% Similarity=0.182 Sum_probs=23.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEE
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITII 48 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~ 48 (460)
|+|.|+-.|..| ..+|+.|.+.||+|++.
T Consensus 1 M~I~iIG~G~mG-----~~la~~l~~~g~~V~~~ 29 (264)
T 1i36_A 1 LRVGFIGFGEVA-----QTLASRLRSRGVEVVTS 29 (264)
T ss_dssp CEEEEESCSHHH-----HHHHHHHHHTTCEEEEC
T ss_pred CeEEEEechHHH-----HHHHHHHHHCCCeEEEe
Confidence 688888766666 46899999999999884
No 318
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=25.40 E-value=65 Score=27.90 Aligned_cols=35 Identities=14% Similarity=0.231 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
-+.++++++.++.| --.++|+.|+++|++|+++..
T Consensus 5 ~~~k~~lVTGas~G---IG~aia~~l~~~G~~V~~~~r 39 (250)
T 3nyw_A 5 KQKGLAIITGASQG---IGAVIAAGLATDGYRVVLIAR 39 (250)
T ss_dssp CCCCEEEEESTTSH---HHHHHHHHHHHHTCEEEEEES
T ss_pred CCCCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEEC
Confidence 34567778755542 347899999999999998875
No 319
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=25.33 E-value=66 Score=26.99 Aligned_cols=34 Identities=21% Similarity=0.190 Sum_probs=24.2
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHH-hCCCeEEEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILY-SKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~-~rGh~V~~~~~~ 51 (460)
||.++++ |+.|-+ -..+++.|. ++||+|+.+...
T Consensus 5 mk~vlVt-Gasg~i--G~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 5 YXYITIL-GAAGQI--AQXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp CSEEEEE-STTSHH--HHHHHHHHHHHCCCEEEEEESS
T ss_pred EEEEEEE-eCCcHH--HHHHHHHHHhcCCceEEEEecC
Confidence 4645555 344433 478899999 899999998874
No 320
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=25.23 E-value=65 Score=28.90 Aligned_cols=32 Identities=13% Similarity=0.138 Sum_probs=24.1
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 16 RVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 16 ~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
+|+|+ |+.|.+ -..++++|.++||+|+.++..
T Consensus 13 ~ilVt--GatG~i--G~~l~~~L~~~g~~V~~l~R~ 44 (318)
T 2r6j_A 13 KILIF--GGTGYI--GNHMVKGSLKLGHPTYVFTRP 44 (318)
T ss_dssp CEEEE--TTTSTT--HHHHHHHHHHTTCCEEEEECT
T ss_pred eEEEE--CCCchH--HHHHHHHHHHCCCcEEEEECC
Confidence 55555 555555 467889999999999998874
No 321
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=25.16 E-value=1.4e+02 Score=27.57 Aligned_cols=34 Identities=15% Similarity=0.149 Sum_probs=24.3
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.|+|+|. |+.|-+ -..|++.|.++||+|+.+...
T Consensus 29 ~~~vlVt--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 62 (379)
T 2c5a_A 29 NLKISIT--GAGGFI--ASHIARRLKHEGHYVIASDWK 62 (379)
T ss_dssp CCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEE--CCccHH--HHHHHHHHHHCCCeEEEEECC
Confidence 3565554 444544 467889999999999998864
No 322
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=25.05 E-value=44 Score=32.30 Aligned_cols=32 Identities=16% Similarity=0.263 Sum_probs=26.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
|||.|+-.|..| ..+|..|+++||+|+++-..
T Consensus 3 mkI~VIG~G~vG-----~~lA~~La~~G~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVG-----LVSATCFAELGANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhcCCEEEEEECC
Confidence 899999766555 67899999999999988753
No 323
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Probab=25.02 E-value=88 Score=26.96 Aligned_cols=40 Identities=3% Similarity=0.017 Sum_probs=30.2
Q ss_pred CCCCcEEEEEcCC---CCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 11 PRNGRRVILFPLP---FQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 11 ~~~~~~il~~~~~---~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
...+..++++.+| ..|...-...+++.|+++|+.|..+--
T Consensus 31 ~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 73 (277)
T 3bxp_A 31 TAVDYPIMIICPGGGFTYHSGREEAPIATRMMAAGMHTVVLNY 73 (277)
T ss_dssp CCCCEEEEEEECCSTTTSCCCTTHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCccEEEEECCCccccCCCccchHHHHHHHHCCCEEEEEec
Confidence 3455667777777 556666778899999999999887654
No 324
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=24.92 E-value=1.3e+02 Score=22.61 Aligned_cols=36 Identities=8% Similarity=-0.001 Sum_probs=27.4
Q ss_pred EEEEEcCCCCCCh--HHHHHHHHHHHhCCCeEEEEeCC
Q 012563 16 RVILFPLPFQGHI--NPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 16 ~il~~~~~~~GHv--~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
-+.++..+-+|+- .-.+.+|..+...||+|.++-..
T Consensus 4 ~~~vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~ 41 (119)
T 2d1p_B 4 IAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIA 41 (119)
T ss_dssp EEEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECG
T ss_pred EEEEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEeh
Confidence 3455666666776 56788999999999999988764
No 325
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=24.83 E-value=75 Score=27.85 Aligned_cols=32 Identities=9% Similarity=0.045 Sum_probs=24.8
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 16 RVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 16 ~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
++++++.++.| --.++|+.|+++|++|+++..
T Consensus 12 k~~lVTGas~g---IG~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 12 PAAVITGGARR---IGHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 56777755543 457899999999999998875
No 326
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=24.83 E-value=73 Score=31.01 Aligned_cols=36 Identities=6% Similarity=0.178 Sum_probs=30.0
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhC-CC-eEEEEeCCCC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSK-GF-SITIIHTKFN 53 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~r-Gh-~V~~~~~~~~ 53 (460)
+-|||.|+-.|..| +.+|..|+++ || +|+++-.+..
T Consensus 17 ~~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECChh
Confidence 34899999888888 5789999999 99 9999876533
No 327
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=24.78 E-value=90 Score=28.11 Aligned_cols=35 Identities=14% Similarity=0.240 Sum_probs=25.1
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 12 RNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
.+.|+|++. |+.|.+ -..|++.|.++||+|+.+..
T Consensus 9 ~~~~~vlVT--GatG~i--G~~l~~~L~~~g~~V~~~~r 43 (342)
T 1y1p_A 9 PEGSLVLVT--GANGFV--ASHVVEQLLEHGYKVRGTAR 43 (342)
T ss_dssp CTTCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEE--CCccHH--HHHHHHHHHHCCCEEEEEeC
Confidence 345666655 445544 46788999999999998876
No 328
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=24.76 E-value=47 Score=30.87 Aligned_cols=33 Identities=21% Similarity=0.306 Sum_probs=26.6
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+.++|+|+-.|-.| +.+|..|+++|++|+++=.
T Consensus 10 ~~~dVvIVGaG~aG-----l~~A~~L~~~G~~v~viE~ 42 (379)
T 3alj_A 10 KTRRAEVAGGGFAG-----LTAAIALKQNGWDVRLHEK 42 (379)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCCEEEEec
Confidence 36789999876544 7889999999999999864
No 329
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=24.76 E-value=69 Score=29.01 Aligned_cols=30 Identities=3% Similarity=0.059 Sum_probs=20.8
Q ss_pred CceEEEEcCcchH-HH-HHhhcCCCeEEEeCc
Q 012563 115 SVACLITDFLWQF-TH-VADEFKLPTIILQTH 144 (460)
Q Consensus 115 ~pDlvI~D~~~~~-~~-~A~~lgiP~v~~~~~ 144 (460)
+||+||....... .. --++.|||++.+...
T Consensus 84 ~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~~~ 115 (326)
T 3psh_A 84 KPDVVFVTNYAPSEMIKQISDVNIPVVAISLR 115 (326)
T ss_dssp CCSEEEEETTCCHHHHHHHHTTTCCEEEECSC
T ss_pred CCCEEEEeCCCChHHHHHHHHcCCCEEEEecc
Confidence 8999998754322 23 445789999987554
No 330
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=24.73 E-value=90 Score=27.43 Aligned_cols=33 Identities=12% Similarity=-0.008 Sum_probs=26.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
.++++++.++.| =-.++|+.|+++|++|+++..
T Consensus 30 ~k~vlVTGas~G---IG~aia~~l~~~G~~Vi~~~r 62 (281)
T 3ppi_A 30 GASAIVSGGAGG---LGEATVRRLHADGLGVVIADL 62 (281)
T ss_dssp TEEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 467888866654 457899999999999988765
No 331
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=24.69 E-value=82 Score=26.91 Aligned_cols=33 Identities=21% Similarity=0.166 Sum_probs=23.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
|+.++++ |+.|-+ -..+++.|.++||+|+++..
T Consensus 1 Mk~vlVt-Gasg~i--G~~l~~~L~~~g~~V~~~~r 33 (255)
T 2dkn_A 1 MSVIAIT-GSASGI--GAALKELLARAGHTVIGIDR 33 (255)
T ss_dssp -CEEEEE-TTTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEe-CCCcHH--HHHHHHHHHhCCCEEEEEeC
Confidence 4556666 344433 56788999999999999876
No 332
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=24.59 E-value=40 Score=31.34 Aligned_cols=39 Identities=5% Similarity=-0.026 Sum_probs=28.4
Q ss_pred CCcEEEEEcCCCCCCh----HHHHHHHHHHHhCCCeEEEEeCC
Q 012563 13 NGRRVILFPLPFQGHI----NPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv----~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
+||||+++..|..+-. .-...++++|.++||+|+.+...
T Consensus 2 ~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (364)
T 2i87_A 2 TKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYIT 44 (364)
T ss_dssp -CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEEC
T ss_pred CCcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEEc
Confidence 4789999986533322 34577899999999999998753
No 333
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=24.58 E-value=75 Score=28.05 Aligned_cols=34 Identities=12% Similarity=0.070 Sum_probs=25.6
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+.|+++++.++.| --.++|+.|+++|++|+++..
T Consensus 23 ~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 56 (279)
T 3sju_A 23 RPQTAFVTGVSSG---IGLAVARTLAARGIAVYGCAR 56 (279)
T ss_dssp --CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 3467888866553 457899999999999988775
No 334
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=24.36 E-value=1.2e+02 Score=21.80 Aligned_cols=34 Identities=6% Similarity=-0.065 Sum_probs=25.5
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+...|+++|..+ ......+..|.+.|++|.++..
T Consensus 55 ~~~~iv~yC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (103)
T 3eme_A 55 KNEIYYIVCAGG----VRSAKVVEYLEANGIDAVNVEG 88 (103)
T ss_dssp TTSEEEEECSSS----SHHHHHHHHHHTTTCEEEEETT
T ss_pred CCCeEEEECCCC----hHHHHHHHHHHHCCCCeEEeCC
Confidence 456788888543 3567788999999998887754
No 335
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=24.35 E-value=89 Score=27.08 Aligned_cols=34 Identities=12% Similarity=0.150 Sum_probs=26.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.|+++++.++.| --.++|+.|+++|++|+++...
T Consensus 6 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 39 (257)
T 3imf_A 6 EKVVIITGGSSG---MGKGMATRFAKEGARVVITGRT 39 (257)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 367788866543 4578999999999999987753
No 336
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=24.33 E-value=78 Score=28.18 Aligned_cols=31 Identities=19% Similarity=0.357 Sum_probs=25.2
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
|+|+|+-.|..|. .+|..|.++||+|+++..
T Consensus 6 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 36 (299)
T 1vpd_A 6 MKVGFIGLGIMGK-----PMSKNLLKAGYSLVVSDR 36 (299)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred ceEEEECchHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 7999998777764 468889999999987754
No 337
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=24.23 E-value=49 Score=28.84 Aligned_cols=33 Identities=9% Similarity=-0.005 Sum_probs=25.1
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+.|+|+|+-.|..| ..+|+.|.+.||+|+++..
T Consensus 2 ~~m~i~iiG~G~mG-----~~~a~~l~~~g~~v~~~~~ 34 (259)
T 2ahr_A 2 NAMKIGIIGVGKMA-----SAIIKGLKQTPHELIISGS 34 (259)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHTTSSCEEEEECS
T ss_pred CccEEEEECCCHHH-----HHHHHHHHhCCCeEEEECC
Confidence 35899999776665 4678899999999877654
No 338
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=24.22 E-value=95 Score=27.20 Aligned_cols=36 Identities=14% Similarity=0.158 Sum_probs=27.2
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
-+.|+++++.++.| --.++|+.|+++|++|+++...
T Consensus 9 l~~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 44 (271)
T 3tzq_B 9 LENKVAIITGACGG---IGLETSRVLARAGARVVLADLP 44 (271)
T ss_dssp TTTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEECT
T ss_pred CCCCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEcCC
Confidence 34567888866543 3568999999999999888753
No 339
>1xfi_A Unknown protein; structural genomics, protein structure initiative, CESG, AT2G17340, center for eukaryotic structural genomics; 1.70A {Arabidopsis thaliana} SCOP: e.50.1.1 PDB: 2q40_A
Probab=24.22 E-value=77 Score=29.62 Aligned_cols=39 Identities=13% Similarity=0.215 Sum_probs=31.6
Q ss_pred CCcEEEEEcCCCC-CChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 13 NGRRVILFPLPFQ-GHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 13 ~~~~il~~~~~~~-GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
+..+|++++=-+. .-+.=++.|++.|.++|++|++.+-.
T Consensus 211 ~~k~Vl~v~DNAG~Eiv~D~L~La~~Ll~~g~kVvl~vK~ 250 (367)
T 1xfi_A 211 SWKKAVIFVDNSGADIILGILPFARELLRRGAQVVLAANE 250 (367)
T ss_dssp CCCEEEEECCBTTHHHHHTHHHHHHHHHHTTCEEEEEEBS
T ss_pred CCCEEEEEecCCCchhhccHHHHHHHHHHcCCEEEEEECC
Confidence 3478999987766 45555699999999999999999874
No 340
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=24.15 E-value=50 Score=29.38 Aligned_cols=31 Identities=19% Similarity=0.289 Sum_probs=25.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
|+|.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 2 ~~I~iiG~G~mG-----~~~a~~l~~~G~~V~~~dr 32 (287)
T 3pdu_A 2 TTYGFLGLGIMG-----GPMAANLVRAGFDVTVWNR 32 (287)
T ss_dssp CCEEEECCSTTH-----HHHHHHHHHHTCCEEEECS
T ss_pred CeEEEEccCHHH-----HHHHHHHHHCCCeEEEEcC
Confidence 578999877777 4678999999999998865
No 341
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=24.06 E-value=83 Score=27.35 Aligned_cols=35 Identities=11% Similarity=0.014 Sum_probs=24.3
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.++++++.++..- --.++|+.|+++|++|+++...
T Consensus 22 ~k~vlITGasg~G--IG~~~a~~l~~~G~~V~~~~r~ 56 (266)
T 3o38_A 22 GKVVLVTAAAGTG--IGSTTARRALLEGADVVISDYH 56 (266)
T ss_dssp TCEEEESSCSSSS--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCCc--hHHHHHHHHHHCCCEEEEecCC
Confidence 3566666553112 2468999999999999988753
No 342
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=24.04 E-value=91 Score=27.82 Aligned_cols=39 Identities=15% Similarity=0.138 Sum_probs=29.2
Q ss_pred cCCCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 9 ISPRNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 9 ~~~~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
|+..-+.|+++++.++.| --.++|+.|+++|++|+++..
T Consensus 22 m~~~l~gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~~ 60 (299)
T 3t7c_A 22 MAGKVEGKVAFITGAARG---QGRSHAITLAREGADIIAIDV 60 (299)
T ss_dssp CCCTTTTCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred cccccCCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEec
Confidence 333334578888866654 457899999999999998875
No 343
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=24.02 E-value=43 Score=32.88 Aligned_cols=35 Identities=11% Similarity=0.310 Sum_probs=28.1
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 12 RNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.+|.||+|+-.|.-| +.+|+.|.++|++||++...
T Consensus 40 ~~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~ 74 (502)
T 4g6h_A 40 SDKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPR 74 (502)
T ss_dssp CSSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESS
T ss_pred CCCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCC
Confidence 346799999866544 57899999999999999864
No 344
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=23.98 E-value=2.2e+02 Score=25.68 Aligned_cols=119 Identities=11% Similarity=0.128 Sum_probs=70.0
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEECCCCCCCchhhccCchhHHhhhCCCceEEeccchHHHhccCCCcceeeccCchhhHH
Q 012563 287 NETEFLEIAWGLANSRVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPAVGGFLTHSGWNSTLE 366 (460)
Q Consensus 287 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~~s~~e 366 (460)
+.++-.++++.++..+.++++..+.... +|+.+.++.+.++.= -|+++ .=...|.+.+..
T Consensus 166 r~~~~~~~~~~l~~~~~DliVlagym~I--------L~~~~l~~~~~~~IN----------iHpSl--LP~frG~~p~~~ 225 (302)
T 3o1l_A 166 KEPAFAEVSRLVGHHQADVVVLARYMQI--------LPPQLCREYAHQVIN----------IHHSF--LPSFVGAKPYHQ 225 (302)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSCCSC--------CCTTHHHHTTTCEEE----------EESSC--TTSSCSSCHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEHhHhhhh--------cCHHHHhhhhCCeEE----------eCccc--ccCCCCccHHHH
Confidence 3444556778888888888888877542 677776655543221 12332 223458999999
Q ss_pred HHhhCCCeeecCcc--cchhhHHHHHHHhhceeEeeCCccCHHHHHHHHHHHhccchHHHHHHHHHHH
Q 012563 367 SICEGVPMICQPCL--ADQMVNARYVSHVWRVGLHLEGKLEKKEIETAIRRLMVEAEGQEMRERITCL 432 (460)
Q Consensus 367 al~~GvP~v~~P~~--~DQ~~na~~v~~~lG~G~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l 432 (460)
|+.+|+...++-.+ .+..+-+..+.+. -+.+...-|.++|.+.+.++-. .-|.+..+.+
T Consensus 226 Ai~~G~k~tG~TvH~v~~~lD~GpII~Q~---~v~I~~~dt~~~L~~r~~~~e~----~~l~~av~~~ 286 (302)
T 3o1l_A 226 ASLRGVKLIGATCHYVTEELDAGPIIEQD---VVRVSHRDSIENMVRFGRDVEK----MVLARGLRAH 286 (302)
T ss_dssp HHHHTCSEEEEEEEECCSSTTCSCEEEEE---EEECCTTCCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred HHHcCCCeEEEEEEEECCCCcCCCeEEEE---EEecCCCCCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 99999998887764 2333333222221 1122224578888777765543 3455544444
No 345
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=23.88 E-value=85 Score=26.83 Aligned_cols=33 Identities=15% Similarity=0.085 Sum_probs=25.2
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+++++++.++.| --.++|+.|+++|++|+++..
T Consensus 3 ~k~vlVTGas~G---IG~a~a~~l~~~G~~V~~~~r 35 (235)
T 3l6e_A 3 LGHIIVTGAGSG---LGRALTIGLVERGHQVSMMGR 35 (235)
T ss_dssp CCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEEC
Confidence 456777755543 357899999999999998876
No 346
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=23.87 E-value=88 Score=26.63 Aligned_cols=33 Identities=6% Similarity=-0.017 Sum_probs=24.5
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 16 RVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 16 ~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
+.++++.++.| --.++|+.|+++|++|+++...
T Consensus 4 k~vlITGas~g---IG~~~a~~l~~~G~~V~~~~r~ 36 (236)
T 1ooe_A 4 GKVIVYGGKGA---LGSAILEFFKKNGYTVLNIDLS 36 (236)
T ss_dssp EEEEEETTTSH---HHHHHHHHHHHTTEEEEEEESS
T ss_pred CEEEEECCCcH---HHHHHHHHHHHCCCEEEEEecC
Confidence 45666644432 3578999999999999998763
No 347
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=23.78 E-value=3.1e+02 Score=22.59 Aligned_cols=100 Identities=18% Similarity=0.231 Sum_probs=57.8
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEECCCCCCCchhhccCchhHHhhhCCCceEEeccchHHHhccCCCccee---eccCchh
Q 012563 287 NETEFLEIAWGLANSRVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPAVGGFL---THSGWNS 363 (460)
Q Consensus 287 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I---~HGG~~s 363 (460)
.++.+..+.+..+..+.+++++..+.. ..||.-+..... .|-+++=+ +-+|..+
T Consensus 53 ~p~~l~~~~~~a~~~g~~ViIa~AG~a-------a~LpgvvA~~t~----------------~PVIgVP~~~~~l~G~ds 109 (183)
T 1o4v_A 53 TPDRMFEYAKNAEERGIEVIIAGAGGA-------AHLPGMVASITH----------------LPVIGVPVKTSTLNGLDS 109 (183)
T ss_dssp CHHHHHHHHHHTTTTTCCEEEEEEESS-------CCHHHHHHHHCS----------------SCEEEEEECCTTTTTHHH
T ss_pred CHHHHHHHHHHHHhCCCcEEEEecCcc-------cccHHHHHhccC----------------CCEEEeeCCCCCCCcHHH
Confidence 566677777766666777777766543 234444422221 11111111 3467777
Q ss_pred hHHHHhh--CCCeeecCcccchhhHHHHHHHhhceeEeeCCccCHHHHHHHHHHHhc
Q 012563 364 TLESICE--GVPMICQPCLADQMVNARYVSHVWRVGLHLEGKLEKKEIETAIRRLMV 418 (460)
Q Consensus 364 ~~eal~~--GvP~v~~P~~~DQ~~na~~v~~~lG~G~~~~~~~~~~~l~~~i~~ll~ 418 (460)
++..+-. |+|+-. ...|-.+||..+.-. = + .++..+|.+.++..-.
T Consensus 110 LlSivqmP~GvpVat--V~Id~~~nAa~lAaq-I----l--a~~d~~l~~kL~~~r~ 157 (183)
T 1o4v_A 110 LFSIVQMPGGVPVAT--VAINNAKNAGILAAS-I----L--GIKYPEIARKVKEYKE 157 (183)
T ss_dssp HHHHHTCCTTCCCEE--CCTTCHHHHHHHHHH-H----H--HTTCHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCeeEE--EecCCchHHHHHHHH-H----H--hcCCHHHHHHHHHHHH
Confidence 7777777 999433 345688898877764 1 1 3556677777765553
No 348
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=23.76 E-value=60 Score=28.86 Aligned_cols=32 Identities=9% Similarity=0.145 Sum_probs=25.4
Q ss_pred CcEEEEEcC-CCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 14 GRRVILFPL-PFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~il~~~~-~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
.|+|+|+-. |..| ..+|+.|.++||+|+++..
T Consensus 11 mm~I~iIG~tG~mG-----~~la~~l~~~g~~V~~~~r 43 (286)
T 3c24_A 11 PKTVAILGAGGKMG-----ARITRKIHDSAHHLAAIEI 43 (286)
T ss_dssp CCEEEEETTTSHHH-----HHHHHHHHHSSSEEEEECC
T ss_pred CCEEEEECCCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 369999977 6655 5688999999999997654
No 349
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=23.73 E-value=1.6e+02 Score=26.07 Aligned_cols=33 Identities=18% Similarity=0.284 Sum_probs=23.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
|+|++. |+.|.+ -..|++.|.++||+|+.+...
T Consensus 1 m~vlVt--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 33 (312)
T 3ko8_A 1 MRIVVT--GGAGFI--GSHLVDKLVELGYEVVVVDNL 33 (312)
T ss_dssp CEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEECCC
T ss_pred CEEEEE--CCCChH--HHHHHHHHHhCCCEEEEEeCC
Confidence 565554 444544 357899999999999998753
No 350
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=23.72 E-value=95 Score=28.49 Aligned_cols=27 Identities=7% Similarity=0.106 Sum_probs=21.8
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEECCCC
Q 012563 287 NETEFLEIAWGLANSRVPFLWVVRPGL 313 (460)
Q Consensus 287 ~~~~~~~~~~al~~~~~~~i~~~~~~~ 313 (460)
..+....+.+++.+...+.||.+.++.
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~ 89 (331)
T 4e5s_A 63 ISSRVQDLHEAFRDPNVKAILTTLGGY 89 (331)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCS
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccc
Confidence 456677799999988889999887764
No 351
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=23.70 E-value=80 Score=26.82 Aligned_cols=35 Identities=11% Similarity=0.066 Sum_probs=27.9
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 16 RVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 16 ~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
..+++.+|..|+..-+..+++.|.++|+.|..+--
T Consensus 27 ~~vv~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~ 61 (286)
T 3qit_A 27 PVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDL 61 (286)
T ss_dssp CEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEECCCCcccchHHHHHHHhhhcCeEEEEECC
Confidence 45666667777777788999999999999887754
No 352
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728}
Probab=23.68 E-value=67 Score=25.97 Aligned_cols=38 Identities=13% Similarity=0.009 Sum_probs=30.4
Q ss_pred CCcEEEEEcCCCCCChHHHHH--HHHHHHhCCCeEEEEeC
Q 012563 13 NGRRVILFPLPFQGHINPMLQ--LGSILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~--lA~~L~~rGh~V~~~~~ 50 (460)
.+..++++.+|..|+..-+.. +++.|.++|+.|..+-.
T Consensus 25 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 64 (207)
T 3bdi_A 25 SNRRSIALFHGYSFTSMDWDKADLFNNYSKIGYNVYAPDY 64 (207)
T ss_dssp TCCEEEEEECCTTCCGGGGGGGTHHHHHHTTTEEEEEECC
T ss_pred CCCCeEEEECCCCCCccccchHHHHHHHHhCCCeEEEEcC
Confidence 345677777788888888888 99999999998877654
No 353
>4egs_A Ribose 5-phosphate isomerase RPIB; tyrosine phosphatase, dephosphorylation, hydrolase; 2.30A {Thermoanaerobacter tengcongensis}
Probab=23.65 E-value=61 Score=26.75 Aligned_cols=39 Identities=10% Similarity=-0.112 Sum_probs=20.4
Q ss_pred CCCCcEEEEEcCCCCCChHHHHHHHHHHH-hCCCeEEEEe
Q 012563 11 PRNGRRVILFPLPFQGHINPMLQLGSILY-SKGFSITIIH 49 (460)
Q Consensus 11 ~~~~~~il~~~~~~~GHv~p~l~lA~~L~-~rGh~V~~~~ 49 (460)
.+.+|||||||.+=..=--..-.|.+.+. ..|.++.+.+
T Consensus 31 ~~~~mkVLFVC~GNiCRSpmAE~l~r~~~~~~g~~~~v~S 70 (180)
T 4egs_A 31 GRGSMRVLFVCTGNTCRSPMAEGIFNAKSKALGKDWEAKS 70 (180)
T ss_dssp ---CCEEEEEESSSSSHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCCCeEEEEEeCCCcccCHHHHHHHHHHHHhcCCceEEEE
Confidence 44689999999775443333333555443 3455544443
No 354
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=23.64 E-value=37 Score=30.74 Aligned_cols=33 Identities=18% Similarity=0.205 Sum_probs=26.8
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+.|+|+|+-.|..| ..+|+.|.++||+|+++..
T Consensus 8 ~~~~IgiIG~G~mG-----~~~A~~l~~~G~~V~~~dr 40 (306)
T 3l6d_A 8 FEFDVSVIGLGAMG-----TIMAQVLLKQGKRVAIWNR 40 (306)
T ss_dssp CSCSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 46899999776665 4789999999999988754
No 355
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=23.60 E-value=85 Score=27.47 Aligned_cols=35 Identities=11% Similarity=0.130 Sum_probs=26.5
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
.++++++++.++.| --.++|++|+++|++|++...
T Consensus 24 ~~~k~vlITGas~g---IG~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 24 SDTPVVLVTGGSRG---IGAAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp CCSCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred cCCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 34678888865543 357899999999999988744
No 356
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=23.55 E-value=81 Score=28.80 Aligned_cols=34 Identities=21% Similarity=0.153 Sum_probs=25.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.|+|++. |+.|.+ -..|++.|.++||+|+.+...
T Consensus 9 ~~~vlVt--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 42 (357)
T 1rkx_A 9 GKRVFVT--GHTGFK--GGWLSLWLQTMGATVKGYSLT 42 (357)
T ss_dssp TCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEE--CCCchH--HHHHHHHHHhCCCeEEEEeCC
Confidence 4666655 555655 467889999999999998863
No 357
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=23.53 E-value=1.2e+02 Score=24.88 Aligned_cols=36 Identities=11% Similarity=0.032 Sum_probs=25.7
Q ss_pred cEEEEEcCC-----CCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 15 RRVILFPLP-----FQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~il~~~~~-----~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
..++++.+| +...-..+..+++.|+++|+.|..+--
T Consensus 37 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 77 (220)
T 2fuk_A 37 PVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNF 77 (220)
T ss_dssp SEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECC
T ss_pred cCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEec
Confidence 556666665 333445578999999999999877654
No 358
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=23.49 E-value=66 Score=25.02 Aligned_cols=36 Identities=8% Similarity=0.146 Sum_probs=23.9
Q ss_pred cEEEEEcCCCCCChHHHH-HHHHHHHhCCCeEEEEeC
Q 012563 15 RRVILFPLPFQGHINPML-QLGSILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l-~lA~~L~~rGh~V~~~~~ 50 (460)
|||+++-....|+..-+. .+++.|.++|++|.++--
T Consensus 1 mki~iiy~S~~Gnt~~~a~~i~~~l~~~g~~v~~~~~ 37 (147)
T 1f4p_A 1 PKALIVYGSTTGNTEYTAETIARELADAGYEVDSRDA 37 (147)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHHHTCEEEEEEG
T ss_pred CeEEEEEECCcCHHHHHHHHHHHHHHhcCCeeEEEeh
Confidence 677777666667765543 355666667998877654
No 359
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=23.15 E-value=2e+02 Score=22.59 Aligned_cols=38 Identities=13% Similarity=-0.013 Sum_probs=28.6
Q ss_pred CcEEEEEcCCCCC---ChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 14 GRRVILFPLPFQG---HINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 14 ~~~il~~~~~~~G---Hv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
...+++++.|+.| ...-+..+.+.|.+.+.++++++..
T Consensus 20 ~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~ 60 (170)
T 2o6l_A 20 ENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDG 60 (170)
T ss_dssp TTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCS
T ss_pred CCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECC
Confidence 3456788888887 4555677888898778998888864
No 360
>3se7_A VANA; alpha-beta structure, D-alanine-D-lactate ligase, ligase; HET: ATP; 3.07A {}
Probab=23.11 E-value=54 Score=30.20 Aligned_cols=39 Identities=5% Similarity=-0.020 Sum_probs=30.0
Q ss_pred CCcEEEEEcCCCCCC----hHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 13 NGRRVILFPLPFQGH----INPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 13 ~~~~il~~~~~~~GH----v~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.||||+++..|-.+- +.-...+++.|.+.||+|+.+...
T Consensus 2 ~~~~v~vl~GG~s~e~~vSl~sa~~v~~al~~~g~~v~~i~~~ 44 (346)
T 3se7_A 2 SHMKIGIIFGGVSEEHDISVKSAREVATHLGTGVFEPFYLGIT 44 (346)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCCEEEEEeeecCCCccHHHHHHHHHHHHhcccCCEEEEEEEC
Confidence 578999998554432 456778889998899999998864
No 361
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=23.10 E-value=1.5e+02 Score=26.61 Aligned_cols=117 Identities=10% Similarity=0.084 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHhCCCCEEEEECCCCCCCchhhccCchhHHhhhCCCceEEeccchHHHhccCCCcceeeccCchhhHHHH
Q 012563 289 TEFLEIAWGLANSRVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPAVGGFLTHSGWNSTLESI 368 (460)
Q Consensus 289 ~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~~s~~eal 368 (460)
++-..+++.++..+.++++..+.... +|+.+.+..+.++.= -|+++ .=...|.+.+..|+
T Consensus 153 ~~~~~~~~~l~~~~~Dlivlagy~~i--------l~~~~l~~~~~~~iN----------iHpSl--LP~~rG~~p~~~A~ 212 (288)
T 3obi_A 153 QQEAAITALIAQTHTDLVVLARYMQI--------LSDEMSARLAGRCIN----------IHHSF--LPGFKGAKPYHQAF 212 (288)
T ss_dssp HHHHHHHHHHHHHTCCEEEESSCCSC--------CCHHHHHHTTTSEEE----------EEEEC--SSCCCSSCHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEhhhhhhh--------CCHHHHhhhcCCeEE----------eCccc--ccCCCCchHHHHHH
Confidence 33455778888778888888776532 677776655543321 12222 22345899999999
Q ss_pred hhCCCeeecCcc--cchhhHHHHHHHhhceeEeeCCccCHHHHHHHHHHHhccchHHHHHHHHHHH
Q 012563 369 CEGVPMICQPCL--ADQMVNARYVSHVWRVGLHLEGKLEKKEIETAIRRLMVEAEGQEMRERITCL 432 (460)
Q Consensus 369 ~~GvP~v~~P~~--~DQ~~na~~v~~~lG~G~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l 432 (460)
.+|+...++-.+ .+..+-+..+.+. -+.+...-|.++|.+.+.++-. .-|.+..+.+
T Consensus 213 ~~G~~~~G~Tvh~v~~~~D~GpIi~Q~---~v~i~~~dt~~~L~~r~~~~e~----~~l~~av~~~ 271 (288)
T 3obi_A 213 DRGVKLIGATAHYVTSALDEGPIIDQD---VERISHRDTPADLVRKGRDIER----RVLSRALHYH 271 (288)
T ss_dssp HHTCSEEEEEEEECCSSTTCSCEEEEE---EEECCTTCCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred HcCCCEEEEEEEEECCCCcCCCeEEEE---EEecCCCCCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 999998887764 2333333222221 1122224578888777765543 3455544443
No 362
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=23.05 E-value=66 Score=29.19 Aligned_cols=34 Identities=15% Similarity=0.187 Sum_probs=27.0
Q ss_pred cEEEEEcCCCC--CChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 15 RRVILFPLPFQ--GHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~--GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.+|++++.++- |+ .+.+|+.|+++|++|+++...
T Consensus 133 ~~vlVlcG~GNNGGD---Glv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQ---GISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECCC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCcEEEEEec
Confidence 48999996543 22 488999999999999998763
No 363
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=22.99 E-value=92 Score=27.38 Aligned_cols=34 Identities=12% Similarity=0.062 Sum_probs=27.9
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+-|+++++.++.| --.++|+.|+++|++|.+...
T Consensus 10 ~GK~alVTGas~G---IG~aia~~la~~Ga~V~~~~r 43 (261)
T 4h15_A 10 RGKRALITAGTKG---AGAATVSLFLELGAQVLTTAR 43 (261)
T ss_dssp TTCEEEESCCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeccCcH---HHHHHHHHHHHcCCEEEEEEC
Confidence 3478899977765 357899999999999998876
No 364
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=22.96 E-value=1e+02 Score=24.83 Aligned_cols=28 Identities=21% Similarity=0.188 Sum_probs=21.8
Q ss_pred EEEEEecccccCCHHHHHHHHHHHHhCC
Q 012563 275 VIYVSFGSVAAINETEFLEIAWGLANSR 302 (460)
Q Consensus 275 ~v~vs~GS~~~~~~~~~~~~~~al~~~~ 302 (460)
.+|+++||....+...+...+.++.+.+
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 5899999998766667777778887653
No 365
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=22.90 E-value=31 Score=26.43 Aligned_cols=38 Identities=21% Similarity=0.135 Sum_probs=23.8
Q ss_pred HHHHHHHhhcCCCCCCCCCCceEEEEcCcchHH--H-HH---hhcCCCeEEEe
Q 012563 96 RNCLAKLVSNTNNNNAQEDSVACLITDFLWQFT--H-VA---DEFKLPTIILQ 142 (460)
Q Consensus 96 ~~~l~~l~~~~~~~~~~~~~pDlvI~D~~~~~~--~-~A---~~lgiP~v~~~ 142 (460)
.+.++.+.+. +||+||.|...+.. . ++ +..++|.|.++
T Consensus 43 ~eAl~~~~~~---------~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 43 QEALDIARKG---------QFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp HHHHHHHHHC---------CSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred HHHHHHHHhC---------CCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 4456655544 89999999876432 1 33 34578877654
No 366
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=22.77 E-value=50 Score=29.52 Aligned_cols=33 Identities=12% Similarity=-0.055 Sum_probs=27.4
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.++|+++-.|..| +..|..|+++|++|+++-..
T Consensus 15 ~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAA-----YGAALYSARYMLKTLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHH-----HHHHHHHHHTTCCEEEEESS
T ss_pred ccCEEEECccHHH-----HHHHHHHHHCCCcEEEEecc
Confidence 4689999877666 77899999999999999863
No 367
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=22.72 E-value=73 Score=31.59 Aligned_cols=47 Identities=19% Similarity=0.260 Sum_probs=30.6
Q ss_pred cccccCCCCCcEEEEEcCCCC---CChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 5 QESRISPRNGRRVILFPLPFQ---GHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 5 ~~~~~~~~~~~~il~~~~~~~---GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
++|...-..-+|.++++.|.. |--.-..+|++.|+++|++|+.+=.+
T Consensus 2 ~~~~~~~~~~~~~i~v~gg~~s~~gk~~~~~~~~~~l~~~g~~v~~~k~~ 51 (550)
T 1vco_A 2 NGSADAGPRPRKYVFITGGVVSSLGKGILTSSLGALLRARGYRVTAIKID 51 (550)
T ss_dssp --------CCCEEEEEEECSSSCSCHHHHHHHHHHHHHTTTCCEEEEEEE
T ss_pred CCcccCcccceeEEEEeCCcccCcchHHHHHHHHHHHHhCCceeeEeecc
Confidence 344433333357888886654 55566789999999999999998875
No 368
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=22.63 E-value=43 Score=30.37 Aligned_cols=34 Identities=12% Similarity=0.153 Sum_probs=25.3
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCC--eEEEEeCC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGF--SITIIHTK 51 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh--~V~~~~~~ 51 (460)
+.|||+++-.|+.|- .+|..|+++|| +|+++..+
T Consensus 6 ~~mkI~IiGaG~vG~-----~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 6 KPTKLAVIGAGAVGS-----TLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp -CCEEEEECCSHHHH-----HHHHHHHHTTCCSEEEEECSS
T ss_pred CCCEEEEECCCHHHH-----HHHHHHHhCCCCCEEEEEeCC
Confidence 358999997655553 37778899999 99998764
No 369
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=22.58 E-value=85 Score=27.04 Aligned_cols=37 Identities=19% Similarity=0.203 Sum_probs=29.6
Q ss_pred EEEEEcC--CCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 012563 16 RVILFPL--PFQGHINPMLQLGSILYSKGFSITIIHTKF 52 (460)
Q Consensus 16 ~il~~~~--~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~ 52 (460)
+++.+.. |+-|-..-...||..|+++|++|.++=.+.
T Consensus 3 ~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 3 RIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 4555543 467889999999999999999999987654
No 370
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=22.57 E-value=1.4e+02 Score=24.01 Aligned_cols=28 Identities=21% Similarity=0.249 Sum_probs=23.2
Q ss_pred EEEEEecccccCCHHHHHHHHHHHHhCC
Q 012563 275 VIYVSFGSVAAINETEFLEIAWGLANSR 302 (460)
Q Consensus 275 ~v~vs~GS~~~~~~~~~~~~~~al~~~~ 302 (460)
.+|+++||....+.+.+...+.++...+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLP 30 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCT
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCC
Confidence 4899999998778888888888888753
No 371
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=22.56 E-value=94 Score=27.40 Aligned_cols=39 Identities=15% Similarity=0.133 Sum_probs=28.5
Q ss_pred cCCCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 9 ISPRNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 9 ~~~~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
|...-+.|+++++.++.| --.++|+.|+++|++|+++..
T Consensus 5 m~~~l~~k~~lVTGas~g---IG~aia~~la~~G~~V~~~~~ 43 (286)
T 3uve_A 5 MTGRVEGKVAFVTGAARG---QGRSHAVRLAQEGADIIAVDI 43 (286)
T ss_dssp -CCTTTTCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCcccCCCEEEEeCCCch---HHHHHHHHHHHCCCeEEEEec
Confidence 333334578888866654 357899999999999998875
No 372
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}
Probab=22.54 E-value=2e+02 Score=27.37 Aligned_cols=33 Identities=12% Similarity=0.018 Sum_probs=24.4
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhC-CCeEEEEeCC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSK-GFSITIIHTK 51 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~r-Gh~V~~~~~~ 51 (460)
+|+|+++..++ ...++++.|+++ |++++++.+.
T Consensus 24 ~~~IlIlG~g~-----r~~al~~~~a~~~g~~~v~~~~~ 57 (452)
T 2qk4_A 24 AARVLIIGSGG-----REHTLAWKLAQSHHVKQVLVAPG 57 (452)
T ss_dssp SEEEEEEECSH-----HHHHHHHHHTTCTTEEEEEEEEC
T ss_pred CcEEEEECCCH-----HHHHHHHHHHhcCCCCEEEEECC
Confidence 57999998763 356788888665 8887777653
No 373
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=22.54 E-value=1e+02 Score=26.80 Aligned_cols=32 Identities=16% Similarity=0.099 Sum_probs=24.6
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 16 RVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 16 ~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
++++++.++.| --.++|+.|+++|++|+++..
T Consensus 30 k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r 61 (262)
T 3rkr_A 30 QVAVVTGASRG---IGAAIARKLGSLGARVVLTAR 61 (262)
T ss_dssp CEEEESSTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCh---HHHHHHHHHHHCCCEEEEEEC
Confidence 56777755543 457889999999999988875
No 374
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16
Probab=22.50 E-value=66 Score=27.64 Aligned_cols=38 Identities=24% Similarity=0.307 Sum_probs=30.7
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
++..++++.+|..|+..-+..+++.|+++|+.|..+-.
T Consensus 52 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~ 89 (262)
T 1jfr_A 52 GTFGAVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDT 89 (262)
T ss_dssp CCEEEEEEECCTTCCGGGTTTHHHHHHTTTCEEEEECC
T ss_pred CCCCEEEEeCCcCCCchhHHHHHHHHHhCCCEEEEeCC
Confidence 34567777788888888888899999999998877665
No 375
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=22.48 E-value=43 Score=30.80 Aligned_cols=36 Identities=8% Similarity=0.211 Sum_probs=26.1
Q ss_pred CCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCC-eEEEEeCC
Q 012563 11 PRNGRRVILFPLPFQGHINPMLQLGSILYSKGF-SITIIHTK 51 (460)
Q Consensus 11 ~~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh-~V~~~~~~ 51 (460)
..++|||.++-.|+.|.- +|..|+..|| +|+++-.+
T Consensus 6 ~~~~~kI~VIGaG~vG~~-----lA~~la~~g~~~V~L~D~~ 42 (331)
T 1pzg_A 6 VQRRKKVAMIGSGMIGGT-----MGYLCALRELADVVLYDVV 42 (331)
T ss_dssp CSCCCEEEEECCSHHHHH-----HHHHHHHHTCCEEEEECSS
T ss_pred CCCCCEEEEECCCHHHHH-----HHHHHHhCCCCeEEEEECC
Confidence 344689999976544433 8899999999 97777653
No 376
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=22.29 E-value=1.7e+02 Score=26.17 Aligned_cols=116 Identities=11% Similarity=0.116 Sum_probs=67.9
Q ss_pred HHHHHHHHHHhCCCCEEEEECCCCCCCchhhccCchhHHhhhCCCceEEeccchHHHhccCCCcceeeccCchhhHHHHh
Q 012563 290 EFLEIAWGLANSRVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPAVGGFLTHSGWNSTLESIC 369 (460)
Q Consensus 290 ~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~~~~~I~HGG~~s~~eal~ 369 (460)
+-..+++.++..+.++++..+.... +|+.+.+..+.++.= -|+++ .=...|.+.+..|+.
T Consensus 153 ~~~~~~~~l~~~~~Dlivlagym~i--------l~~~~l~~~~~~~iN----------iHpSl--LP~~rG~~p~~~Ai~ 212 (287)
T 3nrb_A 153 QESQIKNIVTQSQADLIVLARYMQI--------LSDDLSAFLSGRCIN----------IHHSF--LPGFKGAKPYHQAHT 212 (287)
T ss_dssp HHHHHHHHHHHHTCSEEEESSCCSC--------CCHHHHHHHTTSEEE----------EESSC--TTTTCSSCHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEhhhhhhh--------cCHHHHhhccCCeEE----------ECccc--ccCCCCchHHHHHHH
Confidence 3445777887778888888776542 677776666543321 12222 223458999999999
Q ss_pred hCCCeeecCccc--chhhHHHHHHHhhceeEeeCCccCHHHHHHHHHHHhccchHHHHHHHHHHH
Q 012563 370 EGVPMICQPCLA--DQMVNARYVSHVWRVGLHLEGKLEKKEIETAIRRLMVEAEGQEMRERITCL 432 (460)
Q Consensus 370 ~GvP~v~~P~~~--DQ~~na~~v~~~lG~G~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l 432 (460)
+|+...++-.+. +..+-+..+.+. -+.+...-|.++|.+.+.++-. .-|.+..+.+
T Consensus 213 ~G~k~tG~Tvh~v~~~lD~GpIi~Q~---~v~i~~~dt~~~L~~r~~~~e~----~~l~~av~~~ 270 (287)
T 3nrb_A 213 RGVKLIGATAHFVTADLDEGPIIAQD---VEHVSHRDSAEDLVRKGRDIER----RVLSRAVLLF 270 (287)
T ss_dssp HTCSEEEEEEEECCSSSSCCCEEEEE---EEECCTTCCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred cCCCeEEEEEEEECCCCcCCCEEEEE---EEecCCCCCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 999988877642 223322222221 1122224577888777765543 3455544443
No 377
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=22.29 E-value=1.8e+02 Score=23.02 Aligned_cols=38 Identities=5% Similarity=0.012 Sum_probs=29.0
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
++|||+|+..++. ...=+....+.|.+.|++|.++++.
T Consensus 1 ~~~ki~il~~~g~-~~~e~~~~~~~l~~ag~~v~~vs~~ 38 (168)
T 3l18_A 1 ASMKVLFLSADGF-EDLELIYPLHRIKEEGHEVYVASFQ 38 (168)
T ss_dssp CCCEEEEECCTTB-CHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEEEeCCCc-cHHHHHHHHHHHHHCCCEEEEEECC
Confidence 4689999988754 3344556678888899999999974
No 378
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=22.27 E-value=2.1e+02 Score=21.29 Aligned_cols=48 Identities=6% Similarity=-0.021 Sum_probs=29.7
Q ss_pred hCCCeeecCcccchhhHHHHHHHhhce-eEeeCCccCHHHHHHHHHHHhcc
Q 012563 370 EGVPMICQPCLADQMVNARYVSHVWRV-GLHLEGKLEKKEIETAIRRLMVE 419 (460)
Q Consensus 370 ~GvP~v~~P~~~DQ~~na~~v~~~lG~-G~~~~~~~~~~~l~~~i~~ll~~ 419 (460)
..+|+|++--..|.....+.+.. .|+ +...+ .++.++|..+|++++..
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~~~-~ga~~~l~K-P~~~~~L~~~i~~~~~~ 119 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAIND-AGIHQFLTK-PWHPEQLLSSARNAARM 119 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHHHH-TTCCEEEES-SCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHh-hchhhhccC-CCCHHHHHHHHHHHHHH
Confidence 35677766544443333344444 244 44444 58999999999999865
No 379
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=22.20 E-value=88 Score=25.39 Aligned_cols=39 Identities=15% Similarity=0.242 Sum_probs=29.8
Q ss_pred CCcEEEEEcCCCC---CChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 13 NGRRVILFPLPFQ---GHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 13 ~~~~il~~~~~~~---GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
...+|+|+|.=+. ---.+...|++.|.++|.+|.|..++
T Consensus 22 ~A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 63 (180)
T 1pno_A 22 NASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 63 (180)
T ss_dssp TCSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred hCCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 4568888874322 12357899999999999999999984
No 380
>2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis}
Probab=22.17 E-value=1.1e+02 Score=24.98 Aligned_cols=37 Identities=14% Similarity=0.185 Sum_probs=26.5
Q ss_pred CcEEEEEcCCCCCChH--HHHHHHHHHHhCCCeEEEEeC
Q 012563 14 GRRVILFPLPFQGHIN--PMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~--p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+..++++.+|..|+.. ....+++.|+++|+.|..+-.
T Consensus 34 ~~p~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 72 (223)
T 2o2g_A 34 ATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDL 72 (223)
T ss_dssp CCEEEEEECCTTCCTTCHHHHHHHHHHHHHTCEEEEECS
T ss_pred CceEEEEecCCCCCCCccchHHHHHHHHHCCCEEEEEcC
Confidence 4556666667665554 467899999999998877644
No 381
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=22.15 E-value=1.3e+02 Score=26.10 Aligned_cols=34 Identities=9% Similarity=0.015 Sum_probs=26.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+.|+++++.++.| --.++|+.|+++|++|+++..
T Consensus 10 ~~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 43 (264)
T 3ucx_A 10 TDKVVVISGVGPA---LGTTLARRCAEQGADLVLAAR 43 (264)
T ss_dssp TTCEEEEESCCTT---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCcEEEEECCCcH---HHHHHHHHHHHCcCEEEEEeC
Confidence 3467788866554 357899999999999988775
No 382
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=22.15 E-value=94 Score=27.14 Aligned_cols=42 Identities=17% Similarity=0.232 Sum_probs=25.4
Q ss_pred cccccCCCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 5 QESRISPRNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 5 ~~~~~~~~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
..+|.+-. +.|+++++.++.| --.++|+.|+++|++|+++..
T Consensus 16 ~~~p~~~~-~~k~vlITGas~g---IG~~~a~~l~~~G~~v~~~~~ 57 (269)
T 3gk3_A 16 TQGPGSMQ-AKRVAFVTGGMGG---LGAAISRRLHDAGMAVAVSHS 57 (269)
T ss_dssp ---------CCCEEEETTTTSH---HHHHHHHHHHTTTCEEEEEEC
T ss_pred cCCchhhh-cCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 33444332 3467778755542 346889999999999998874
No 383
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=22.15 E-value=1.3e+02 Score=24.33 Aligned_cols=37 Identities=11% Similarity=-0.030 Sum_probs=26.8
Q ss_pred CcEEEEEcCC-----CCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 14 GRRVILFPLP-----FQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~il~~~~~-----~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+..++++.+| +...-.-...+++.|.++|+.|..+--
T Consensus 30 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 71 (208)
T 3trd_A 30 KSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNF 71 (208)
T ss_dssp CSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEec
Confidence 4566666666 444445567899999999999877654
No 384
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=22.07 E-value=84 Score=28.37 Aligned_cols=34 Identities=21% Similarity=0.408 Sum_probs=24.4
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.|+|++. |+.|.+ -..|++.|.++||+|+.+...
T Consensus 3 ~~~vlVt--GatG~i--G~~l~~~L~~~G~~V~~~~r~ 36 (345)
T 2z1m_A 3 GKRALIT--GIRGQD--GAYLAKLLLEKGYEVYGADRR 36 (345)
T ss_dssp CCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEE--CCCChH--HHHHHHHHHHCCCEEEEEECC
Confidence 3566554 444544 467899999999999998763
No 385
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=21.92 E-value=81 Score=26.88 Aligned_cols=36 Identities=17% Similarity=0.266 Sum_probs=29.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
...+++.+|..|+..-+..+++.|.++|+.|..+--
T Consensus 40 ~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~ 75 (270)
T 3rm3_A 40 PVGVLLVHGFTGTPHSMRPLAEAYAKAGYTVCLPRL 75 (270)
T ss_dssp SEEEEEECCTTCCGGGTHHHHHHHHHTTCEEEECCC
T ss_pred CeEEEEECCCCCChhHHHHHHHHHHHCCCEEEEeCC
Confidence 466777778888888889999999999998876543
No 386
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=21.86 E-value=96 Score=26.96 Aligned_cols=36 Identities=8% Similarity=0.025 Sum_probs=25.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
-|+++++..+.+ --=-.++|+.|+++|++|++....
T Consensus 6 gK~alVTGaa~~-~GIG~aiA~~la~~Ga~Vvi~~r~ 41 (256)
T 4fs3_A 6 NKTYVIMGIANK-RSIAFGVAKVLDQLGAKLVFTYRK 41 (256)
T ss_dssp TCEEEEECCCST-TCHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCCC-chHHHHHHHHHHHCCCEEEEEECC
Confidence 467778753321 112578999999999999988763
No 387
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=21.86 E-value=95 Score=27.56 Aligned_cols=32 Identities=13% Similarity=0.076 Sum_probs=25.2
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEe
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIH 49 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~ 49 (460)
.++++++.++.| --.++|+.|+++|++|+++.
T Consensus 9 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~ 40 (291)
T 1e7w_A 9 VPVALVTGAAKR---LGRSIAEGLHAEGYAVCLHY 40 (291)
T ss_dssp CCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCeEEEEc
Confidence 356778866543 45789999999999999987
No 388
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=21.83 E-value=1.5e+02 Score=25.72 Aligned_cols=37 Identities=14% Similarity=0.368 Sum_probs=27.0
Q ss_pred cEEEEEcCCCCCC-----------hHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 15 RRVILFPLPFQGH-----------INPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GH-----------v~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
+||+++.....+. ..=+......|.+.|++|+++++.
T Consensus 4 ~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~ 51 (244)
T 3kkl_A 4 KRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSET 51 (244)
T ss_dssp CEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4788887754221 234667778999999999999974
No 389
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=21.77 E-value=2e+02 Score=21.88 Aligned_cols=47 Identities=11% Similarity=-0.021 Sum_probs=30.0
Q ss_pred hCCCeeecCcccchhhHHHHHHHhhc-e-eEeeCCccCHHHHHHHHHHHhcc
Q 012563 370 EGVPMICQPCLADQMVNARYVSHVWR-V-GLHLEGKLEKKEIETAIRRLMVE 419 (460)
Q Consensus 370 ~GvP~v~~P~~~DQ~~na~~v~~~lG-~-G~~~~~~~~~~~l~~~i~~ll~~ 419 (460)
..+|+|++--..|.... ....+ .| + +...+ .++.++|.++|++++..
T Consensus 75 ~~~~ii~~s~~~~~~~~-~~~~~-~g~~~~~l~K-P~~~~~L~~~i~~~l~~ 123 (151)
T 3kcn_A 75 PNSVYLMLTGNQDLTTA-MEAVN-EGQVFRFLNK-PCQMSDIKAAINAGIKQ 123 (151)
T ss_dssp SSCEEEEEECGGGHHHH-HHHHH-HTCCSEEEES-SCCHHHHHHHHHHHHHH
T ss_pred CCcEEEEEECCCCHHHH-HHHHH-cCCeeEEEcC-CCCHHHHHHHHHHHHHH
Confidence 45677766554444333 33334 26 5 44444 58999999999999976
No 390
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=21.76 E-value=90 Score=25.42 Aligned_cols=38 Identities=16% Similarity=0.116 Sum_probs=29.2
Q ss_pred CcEEEEEcCCCC---CChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 14 GRRVILFPLPFQ---GHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 14 ~~~il~~~~~~~---GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
..+|+|+|.=+. ---.+...|++.|.++|.+|.|..++
T Consensus 22 A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 62 (184)
T 1d4o_A 22 ANSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHP 62 (184)
T ss_dssp CSEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 467888874322 12357899999999999999999984
No 391
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=21.74 E-value=82 Score=24.72 Aligned_cols=33 Identities=9% Similarity=0.120 Sum_probs=22.0
Q ss_pred EEEEcCCCCCChH--HHHHHHHHHHhCCCeEEEEe
Q 012563 17 VILFPLPFQGHIN--PMLQLGSILYSKGFSITIIH 49 (460)
Q Consensus 17 il~~~~~~~GHv~--p~l~lA~~L~~rGh~V~~~~ 49 (460)
++++.+|..|... .+..+++.|.++|+.|..+-
T Consensus 6 ~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d 40 (176)
T 2qjw_A 6 HCILAHGFESGPDALKVTALAEVAERLGWTHERPD 40 (176)
T ss_dssp EEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECCC
T ss_pred EEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEeC
Confidence 4444456555444 46689999999998776543
No 392
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=21.71 E-value=1.4e+02 Score=23.38 Aligned_cols=38 Identities=16% Similarity=0.325 Sum_probs=26.5
Q ss_pred CcEEEEE-cCCCCCChHH--HHHHHHHHHhCCCeE-EEEeCC
Q 012563 14 GRRVILF-PLPFQGHINP--MLQLGSILYSKGFSI-TIIHTK 51 (460)
Q Consensus 14 ~~~il~~-~~~~~GHv~p--~l~lA~~L~~rGh~V-~~~~~~ 51 (460)
.|+++|+ +.+.+|+-.. .+.+|..+.+.||+| .++-..
T Consensus 12 ~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~ 53 (140)
T 2d1p_A 12 SMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYR 53 (140)
T ss_dssp CCEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred ceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEec
Confidence 4666655 4445565444 678899999999999 776653
No 393
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=21.69 E-value=87 Score=28.29 Aligned_cols=32 Identities=22% Similarity=0.233 Sum_probs=23.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
|+|++. |+.|.+ -..|++.|.++||+|+.+..
T Consensus 1 m~vlVT--GatG~i--G~~l~~~L~~~G~~V~~~~~ 32 (338)
T 1udb_A 1 MRVLVT--GGSGYI--GSHTCVQLLQNGHDVIILDN 32 (338)
T ss_dssp CEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEE--CCCCHH--HHHHHHHHHHCCCEEEEEec
Confidence 555544 455544 45789999999999998764
No 394
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=21.68 E-value=54 Score=31.25 Aligned_cols=35 Identities=23% Similarity=0.330 Sum_probs=27.1
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 12 RNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.+++||+|+-+|-. ...+|+.|.++|++|+++-.+
T Consensus 2 ~~~~~viIiG~Gr~-----G~~va~~L~~~g~~vvvId~d 36 (413)
T 3l9w_A 2 SHGMRVIIAGFGRF-----GQITGRLLLSSGVKMVVLDHD 36 (413)
T ss_dssp --CCSEEEECCSHH-----HHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCeEEEECCCHH-----HHHHHHHHHHCCCCEEEEECC
Confidence 45789999876543 467899999999999999875
No 395
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=21.59 E-value=87 Score=27.69 Aligned_cols=33 Identities=15% Similarity=0.128 Sum_probs=25.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
.|+++++.++.| --.++|+.|+++|++|+++..
T Consensus 25 ~k~~lVTGas~G---IG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 25 TKTAVITGSTSG---IGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 367778866543 457899999999999988765
No 396
>1ta9_A Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosaccharomyces pombe}
Probab=21.47 E-value=1.2e+02 Score=29.22 Aligned_cols=91 Identities=19% Similarity=0.143 Sum_probs=48.5
Q ss_pred hhhhhccCCCCeEEEEEecccccCCHHHHHHHHHHHHhCCCCEEE-EECCCCCCCchhhccCchhHHhhhCCCceEEecc
Q 012563 263 SISWLDKQAPKSVIYVSFGSVAAINETEFLEIAWGLANSRVPFLW-VVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWA 341 (460)
Q Consensus 263 l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 341 (460)
+.+++...+.+.++.|+-++... .....+...|+..+..+.+ .+.+.. ..+.+.+- .+..
T Consensus 82 l~~~l~~~g~~rvlIVtd~~~~~---~~~~~v~~~L~~~gi~~~~~~~~ge~---------~~~~v~~~-------~~~~ 142 (450)
T 1ta9_A 82 SYMYVKKWATKSAVVLADQNVWN---ICANKIVDSLSQNGMTVTKLVFGGEA---------SLVELDKL-------RKQC 142 (450)
T ss_dssp HHHHHTTTCSSEEEEEEEHHHHH---HTHHHHHHHHHHTTCEEEEEEECSCC---------CHHHHHHH-------HTTS
T ss_pred HHHHHHhcCCCEEEEEECccHHH---HHHHHHHHHHHHCCCeEEEEeeCCCC---------CHHHHHHH-------HHHH
Confidence 44555443333666666544332 3566678888877766532 233221 11233210 1111
Q ss_pred chHHHhccCCCcceeeccCchhhHHH-----HhhCCCeeecCcc
Q 012563 342 PQQQVLAHPAVGGFLTHSGWNSTLES-----ICEGVPMICQPCL 380 (460)
Q Consensus 342 p~~~lL~~~~~~~~I~HGG~~s~~ea-----l~~GvP~v~~P~~ 380 (460)
- ..+++ +|.=|| ||+..+ ...|+|.|.+|..
T Consensus 143 ~-----~~~D~--IIAvGG-GSviD~AK~iA~~~giP~I~IPTT 178 (450)
T 1ta9_A 143 P-----DDTQV--IIGVGG-GKTMDSAKYIAHSMNLPSIICPTT 178 (450)
T ss_dssp C-----TTCCE--EEEEES-HHHHHHHHHHHHHTTCCEEEEESS
T ss_pred h-----hCCCE--EEEeCC-cHHHHHHHHHHHhcCCCEEEEeCC
Confidence 1 14565 999988 444332 4569999999996
No 397
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=21.39 E-value=1.1e+02 Score=26.68 Aligned_cols=37 Identities=14% Similarity=0.061 Sum_probs=27.5
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 12 RNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 12 ~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
..+.|.++++.++.| --.++|+.|+++|++|+++...
T Consensus 11 ~~~~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 47 (269)
T 3vtz_A 11 EFTDKVAIVTGGSSG---IGLAVVDALVRYGAKVVSVSLD 47 (269)
T ss_dssp TTTTCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 345677778865543 3578999999999999988763
No 398
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=21.34 E-value=96 Score=26.26 Aligned_cols=37 Identities=16% Similarity=0.177 Sum_probs=29.2
Q ss_pred EEEEEc--CCCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 012563 16 RVILFP--LPFQGHINPMLQLGSILYSKGFSITIIHTKF 52 (460)
Q Consensus 16 ~il~~~--~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~ 52 (460)
+++.+. -|+-|-..-...||..|+++|++|.++-.+.
T Consensus 3 ~~i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (237)
T 1g3q_A 3 RIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred eEEEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCCC
Confidence 444443 3467899999999999999999999997653
No 399
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=21.30 E-value=2e+02 Score=25.35 Aligned_cols=33 Identities=12% Similarity=0.110 Sum_probs=24.3
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 16 RVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 16 ~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
|+++++.++.| =-.++|+.|+++|++|+++...
T Consensus 17 k~vlVTGas~g---IG~~~a~~L~~~G~~V~~~~r~ 49 (291)
T 3rd5_A 17 RTVVITGANSG---LGAVTARELARRGATVIMAVRD 49 (291)
T ss_dssp CEEEEECCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEECC
Confidence 45666645432 3478999999999999998763
No 400
>2q37_A OHCU decarboxylase; 2-OXO-4-hydroxy-4-carboxy-5-ureidoimidazoline, plant protein, lyase; HET: 3AL; 2.50A {Arabidopsis thaliana} SCOP: a.288.1.1
Probab=21.28 E-value=2.5e+02 Score=23.09 Aligned_cols=53 Identities=11% Similarity=-0.022 Sum_probs=38.0
Q ss_pred hhhHHHHHHHhhceeEeeCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Q 012563 383 QMVNARYVSHVWRVGLHLEG-KLEKKEIETAIRRLMVEAEGQEMRERITCLKKNV 436 (460)
Q Consensus 383 Q~~na~~v~~~lG~G~~~~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~ 436 (460)
+-.|++|-++ .|.-..+-- ..+.++|.+++.+=|.|+...+.+..+..+.+..
T Consensus 117 ~~LN~~Ye~k-FGfpFVi~v~G~s~~~IL~~l~~RL~N~~~~E~~~Al~Ev~kIa 170 (181)
T 2q37_A 117 AEWNVLYKKK-FGFIFIICASGRTHAEMLHALKERYENRPIVELEIAAMEQMKIT 170 (181)
T ss_dssp HHHHHHHHHH-HSSCCCCCCSSCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-cCCeEEEEeCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 4568999999 787777654 6788999999999998854445555555555443
No 401
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=21.27 E-value=1.2e+02 Score=26.96 Aligned_cols=40 Identities=10% Similarity=0.072 Sum_probs=27.8
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCCCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNSPN 56 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~~ 56 (460)
||||+.-==+. +---+..|++.|.+.| +|+++.++....-
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg 40 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSA 40 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTT
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcC
Confidence 67776653333 2233788999999888 8999998755433
No 402
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=21.20 E-value=1.9e+02 Score=24.51 Aligned_cols=34 Identities=18% Similarity=0.105 Sum_probs=25.3
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.|+++++.++ |- --.++|+.|+++|++|+++...
T Consensus 14 ~k~vlITGas-~g--IG~~ia~~l~~~G~~V~~~~r~ 47 (247)
T 3i1j_A 14 GRVILVTGAA-RG--IGAAAARAYAAHGASVVLLGRT 47 (247)
T ss_dssp TCEEEESSTT-SH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCC-Ch--HHHHHHHHHHHCCCEEEEEecC
Confidence 4677777554 32 3468899999999999888753
No 403
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=21.19 E-value=1.1e+02 Score=26.58 Aligned_cols=33 Identities=12% Similarity=-0.011 Sum_probs=25.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
.|+++++.++.| --.++|+.|+++|++|+++..
T Consensus 8 gk~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r 40 (255)
T 4eso_A 8 GKKAIVIGGTHG---MGLATVRRLVEGGAEVLLTGR 40 (255)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 356777755543 357899999999999998875
No 404
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=21.17 E-value=83 Score=30.74 Aligned_cols=24 Identities=4% Similarity=0.016 Sum_probs=20.1
Q ss_pred CceEEEEcCcchHHH-HHhhcCCCeEEE
Q 012563 115 SVACLITDFLWQFTH-VADEFKLPTIIL 141 (460)
Q Consensus 115 ~pDlvI~D~~~~~~~-~A~~lgiP~v~~ 141 (460)
+||++|.. .... +|+++|||++.+
T Consensus 417 ~pDL~ig~---~~~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 417 KPDLIGSG---IKEKFIFQKMGIPFREM 441 (492)
T ss_dssp CCSEEEEC---HHHHHHHHHTTCCEEES
T ss_pred CCcEEEeC---cchhHHHHHcCCCEEec
Confidence 89999997 3456 999999999963
No 405
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=21.15 E-value=94 Score=27.32 Aligned_cols=34 Identities=18% Similarity=0.061 Sum_probs=25.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.|+++++.++.| --.++|+.|+++|++|+++...
T Consensus 10 ~k~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 10 GKTALITGGARG---MGRSHAVALAEAGADIAICDRC 43 (281)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEeCCCch---HHHHHHHHHHHCCCeEEEEeCC
Confidence 356777766543 4578999999999999988763
No 406
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=21.15 E-value=1.2e+02 Score=27.75 Aligned_cols=37 Identities=11% Similarity=0.090 Sum_probs=30.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.+|++.++|..|+-+-...++..|..-|.+|++++++
T Consensus 169 l~ia~a~~~~vGD~rva~Sl~~~~~~~G~~v~~~~P~ 205 (324)
T 1js1_X 169 VVMTWAPHPRPLPQAVPNSFAEWMNATDYEFVITHPE 205 (324)
T ss_dssp EEEECCCCSSCCCSHHHHHHHHHHHTSSSEEEEECCT
T ss_pred EEEEEEcccccCCcchHHHHHHHHHHCCCEEEEeCCc
Confidence 7788888888888666777888888789999998884
No 407
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=21.14 E-value=69 Score=28.59 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=25.1
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.|+|+|. |+.|.+ -..|++.|.++||+|+.++..
T Consensus 7 ~~~vlVt--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 7 KHRILIT--GGAGFI--GGHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp CCEEEEE--TTTSHH--HHHHHHHHHHTTCCEEEECCC
T ss_pred CCeEEEE--CCCChH--HHHHHHHHHHCCCEEEEEecC
Confidence 4566655 455544 457899999999999999864
No 408
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=21.10 E-value=71 Score=27.76 Aligned_cols=40 Identities=15% Similarity=0.120 Sum_probs=31.3
Q ss_pred CCcEEEEEcC--CCCCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 012563 13 NGRRVILFPL--PFQGHINPMLQLGSILYSKGFSITIIHTKF 52 (460)
Q Consensus 13 ~~~~il~~~~--~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~ 52 (460)
++|+++.+.. |+-|-..-...||..|+++|++|.++=.+.
T Consensus 4 ~~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 45 (257)
T 1wcv_1 4 AKVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDP 45 (257)
T ss_dssp -CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4566666654 466888899999999999999999987653
No 409
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=21.08 E-value=1.8e+02 Score=26.72 Aligned_cols=36 Identities=14% Similarity=0.197 Sum_probs=25.3
Q ss_pred eEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEECC
Q 012563 274 SVIYVSFGSVAAINETEFLEIAWGLANSRVPFLWVVRP 311 (460)
Q Consensus 274 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 311 (460)
.++++++|+.+- -..+..+.++|.+.|+++.+....
T Consensus 6 ~il~~~~~~~Gh--v~~~~~La~~L~~~GheV~v~~~~ 41 (402)
T 3ia7_A 6 HILFANVQGHGH--VYPSLGLVSELARRGHRITYVTTP 41 (402)
T ss_dssp EEEEECCSSHHH--HHHHHHHHHHHHHTTCEEEEEECH
T ss_pred EEEEEeCCCCcc--cccHHHHHHHHHhCCCEEEEEcCH
Confidence 577777776442 344566888888889888887753
No 410
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=21.05 E-value=54 Score=30.89 Aligned_cols=31 Identities=13% Similarity=0.275 Sum_probs=24.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
|+|+|+-.|..| +..|..|+++|++|+++=.
T Consensus 1 ~dVvVIGaGiaG-----LsaA~~La~~G~~V~vlE~ 31 (425)
T 3ka7_A 1 MKTVVIGAGLGG-----LLSAARLSKAGHEVEVFER 31 (425)
T ss_dssp CEEEEECCBHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CcEEEECCCHHH-----HHHHHHHHhCCCceEEEeC
Confidence 577777766555 7889999999999999854
No 411
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Probab=21.03 E-value=1.1e+02 Score=27.10 Aligned_cols=36 Identities=22% Similarity=0.338 Sum_probs=30.5
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEe
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIH 49 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~ 49 (460)
+.-++++.+|..|+..-+..+++.|+++|+.|..+-
T Consensus 95 ~~p~vv~~HG~~~~~~~~~~~~~~la~~G~~vv~~d 130 (306)
T 3vis_A 95 TYGAIAISPGYTGTQSSIAWLGERIASHGFVVIAID 130 (306)
T ss_dssp CEEEEEEECCTTCCHHHHHHHHHHHHTTTEEEEEEC
T ss_pred CCCEEEEeCCCcCCHHHHHHHHHHHHhCCCEEEEec
Confidence 456788888888999999999999999999887764
No 412
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=21.02 E-value=84 Score=27.18 Aligned_cols=28 Identities=11% Similarity=0.042 Sum_probs=20.3
Q ss_pred CceEEEEcCcch--HHH-HHhhcCCCeEEEe
Q 012563 115 SVACLITDFLWQ--FTH-VADEFKLPTIILQ 142 (460)
Q Consensus 115 ~pDlvI~D~~~~--~~~-~A~~lgiP~v~~~ 142 (460)
+||+||...... ... --++.|||++.+.
T Consensus 59 ~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 59 KPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp CCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred CCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 899999987542 233 4457899999875
No 413
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=20.97 E-value=1.4e+02 Score=26.63 Aligned_cols=33 Identities=15% Similarity=0.224 Sum_probs=23.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
|+|++. |+.|-+ -..|++.|.++||+|+.+...
T Consensus 2 ~~ilVt--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 34 (330)
T 2c20_A 2 NSILIC--GGAGYI--GSHAVKKLVDEGLSVVVVDNL 34 (330)
T ss_dssp CEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEE--CCCcHH--HHHHHHHHHhCCCEEEEEeCC
Confidence 355444 344443 467899999999999998753
No 414
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=20.96 E-value=1e+02 Score=25.12 Aligned_cols=35 Identities=14% Similarity=0.190 Sum_probs=25.5
Q ss_pred EEEEEcCCCCC----ChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 16 RVILFPLPFQG----HINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 16 ~il~~~~~~~G----Hv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
.|.+++....+ +..-...|++.|+++|+.|+.=..
T Consensus 3 ~V~V~gs~~~~~~~~~~~~A~~lg~~La~~g~~lV~Ggg 41 (171)
T 1weh_A 3 LLAVFVSSRLSPEDPLYARWVRYGEVLAEEGFGLACGGY 41 (171)
T ss_dssp EEEEECCSSCCTTSHHHHHHHHHHHHHHHTTEEEEECCS
T ss_pred EEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEeCCh
Confidence 58888876654 456688888999999877666444
No 415
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=20.96 E-value=95 Score=25.57 Aligned_cols=36 Identities=14% Similarity=0.210 Sum_probs=26.5
Q ss_pred CcEEEEEcCCCCCChHHHHH-HHHHHHhCCCeEEEEeC
Q 012563 14 GRRVILFPLPFQGHINPMLQ-LGSILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~-lA~~L~~rGh~V~~~~~ 50 (460)
.|||+++... .|+..-+.. +++.|.+.|++|.++--
T Consensus 4 mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l 40 (199)
T 2zki_A 4 KPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRV 40 (199)
T ss_dssp CCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred CcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEeh
Confidence 4789888877 887766544 45667777999988765
No 416
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=20.95 E-value=71 Score=28.37 Aligned_cols=32 Identities=19% Similarity=0.157 Sum_probs=25.5
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
-++|+|+-.|..| ..+|..|+++||+|+++-.
T Consensus 4 ~~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d~ 35 (283)
T 4e12_A 4 ITNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYDI 35 (283)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECCCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 3689999666555 5789999999999998754
No 417
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=20.94 E-value=75 Score=27.75 Aligned_cols=33 Identities=21% Similarity=0.097 Sum_probs=25.5
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 16 RVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 16 ~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
++++++.++.| --.++|+.|+++|++|+++...
T Consensus 28 k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 60 (260)
T 3gem_A 28 APILITGASQR---VGLHCALRLLEHGHRVIISYRT 60 (260)
T ss_dssp CCEEESSTTSH---HHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 56777765543 3578999999999999998763
No 418
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=20.92 E-value=1e+02 Score=25.71 Aligned_cols=34 Identities=15% Similarity=0.206 Sum_probs=23.4
Q ss_pred EEEEEcCCCCC----ChHHHHHHHHHHHhCCCeEEEEe
Q 012563 16 RVILFPLPFQG----HINPMLQLGSILYSKGFSITIIH 49 (460)
Q Consensus 16 ~il~~~~~~~G----Hv~p~l~lA~~L~~rGh~V~~~~ 49 (460)
.|.+++....| +..-...|++.|+++|+.|+.=.
T Consensus 3 ~V~V~gss~~~~~~~~~~~A~~lg~~La~~g~~lV~GG 40 (191)
T 1t35_A 3 TICVFAGSNPGGNEAYKRKAAELGVYMAEQGIGLVYGG 40 (191)
T ss_dssp EEEEECCSSCCSSTHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred EEEEEECCCCCCChHHHHHHHHHHHHHHHCCCEEEECC
Confidence 48888866543 34457778888888888765544
No 419
>1t1j_A Hypothetical protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.14.2
Probab=20.90 E-value=1.2e+02 Score=23.23 Aligned_cols=34 Identities=12% Similarity=0.218 Sum_probs=24.3
Q ss_pred CCcEEEEEcCCCCCChH--------HHHHHHHHHHhCCCeEE
Q 012563 13 NGRRVILFPLPFQGHIN--------PMLQLGSILYSKGFSIT 46 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~--------p~l~lA~~L~~rGh~V~ 46 (460)
.-|+.++++.|-.|... -+-..|..|.++||-+.
T Consensus 6 ~~M~~IYIagPysg~~~n~~~~n~~~~~r~A~~l~~~G~ip~ 47 (125)
T 1t1j_A 6 GHMRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVF 47 (125)
T ss_dssp -CCCEEEEECCCCCSSHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred hhhhheeEECCCCCCcchHHHHHHHHHHHHHHHHHHCCCeee
Confidence 35788899999888732 34556777889999655
No 420
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=20.89 E-value=72 Score=23.98 Aligned_cols=13 Identities=15% Similarity=0.419 Sum_probs=9.3
Q ss_pred HHHhCCCeEEEEe
Q 012563 37 ILYSKGFSITIIH 49 (460)
Q Consensus 37 ~L~~rGh~V~~~~ 49 (460)
++++.|.+|.+++
T Consensus 74 ~~~~~G~~V~~l~ 86 (117)
T 3hh1_A 74 ELLEEGSDVALVT 86 (117)
T ss_dssp HHHHTTCCEEEEE
T ss_pred HHHHCCCeEEEEe
Confidence 3345688888888
No 421
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=20.84 E-value=1e+02 Score=28.64 Aligned_cols=33 Identities=21% Similarity=0.231 Sum_probs=24.4
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHH-hCCCeEEEEeC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILY-SKGFSITIIHT 50 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~-~rGh~V~~~~~ 50 (460)
+|+|+|. |+.|.+ -..|++.|. ++||+|+++..
T Consensus 2 ~m~vlVT--GatG~i--G~~l~~~L~~~~g~~V~~~~r 35 (397)
T 1gy8_A 2 HMRVLVC--GGAGYI--GSHFVRALLRDTNHSVVIVDS 35 (397)
T ss_dssp CCEEEEE--TTTSHH--HHHHHHHHHHHCCCEEEEEEC
T ss_pred CCEEEEE--CCCCHH--HHHHHHHHHHhCCCEEEEEec
Confidence 4676655 455544 467889999 99999999875
No 422
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=20.84 E-value=89 Score=28.22 Aligned_cols=35 Identities=17% Similarity=0.173 Sum_probs=25.5
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 13 NGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 13 ~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
++|+|+|. |+.|.+ -..|++.|.++||+|+.+...
T Consensus 19 ~~~~vlVT--GasG~i--G~~l~~~L~~~g~~V~~~~r~ 53 (330)
T 2pzm_A 19 SHMRILIT--GGAGCL--GSNLIEHWLPQGHEILVIDNF 53 (330)
T ss_dssp TCCEEEEE--TTTSHH--HHHHHHHHGGGTCEEEEEECC
T ss_pred CCCEEEEE--CCCCHH--HHHHHHHHHHCCCEEEEEECC
Confidence 34676655 444544 467899999999999998863
No 423
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=20.82 E-value=91 Score=27.11 Aligned_cols=36 Identities=19% Similarity=0.180 Sum_probs=29.7
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 16 RVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 16 ~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.|.|..-|+-|-..-...||..|+++|++|.++=.+
T Consensus 3 vI~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D 38 (269)
T 1cp2_A 3 QVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred EEEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCC
Confidence 345555667899999999999999999999998665
No 424
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=20.78 E-value=2.2e+02 Score=20.97 Aligned_cols=34 Identities=21% Similarity=0.277 Sum_probs=28.1
Q ss_pred EEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEECCC
Q 012563 275 VIYVSFGSVAAINETEFLEIAWGLANSRVPFLWVVRPG 312 (460)
Q Consensus 275 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 312 (460)
-||+-|.| .++.+..+..-+...|.++++.++..
T Consensus 3 qifvvfss----dpeilkeivreikrqgvrvvllysdq 36 (162)
T 2l82_A 3 QIFVVFSS----DPEILKEIVREIKRQGVRVVLLYSDQ 36 (162)
T ss_dssp EEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred eEEEEecC----CHHHHHHHHHHHHhCCeEEEEEecCc
Confidence 46777765 78899999999999999999888754
No 425
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=20.72 E-value=2.6e+02 Score=25.36 Aligned_cols=66 Identities=11% Similarity=0.118 Sum_probs=39.5
Q ss_pred CCeEEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEECCCCCCCchhhccCchhHHhhhCCCceEEeccchHHHhccCC
Q 012563 272 PKSVIYVSFGSVAAINETEFLEIAWGLANSRVPFLWVVRPGLVDGVEWLEALPKGYLEMVDGRGYIVQWAPQQQVLAHPA 351 (460)
Q Consensus 272 ~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~lL~~~~ 351 (460)
++.+-.|.+|.++. .++..+...|.+++..-..... . +.+. ....+..-.++++.++
T Consensus 137 gktvGIiGlG~IG~-------~vA~~l~~~G~~V~~~dr~~~~--------~-~~~~-------~~~~~~~l~ell~~aD 193 (324)
T 3evt_A 137 GQQLLIYGTGQIGQ-------SLAAKASALGMHVIGVNTTGHP--------A-DHFH-------ETVAFTATADALATAN 193 (324)
T ss_dssp TCEEEEECCSHHHH-------HHHHHHHHTTCEEEEEESSCCC--------C-TTCS-------EEEEGGGCHHHHHHCS
T ss_pred CCeEEEECcCHHHH-------HHHHHHHhCCCEEEEECCCcch--------h-HhHh-------hccccCCHHHHHhhCC
Confidence 57889999999884 4445555668776543322110 0 1110 1233445577899999
Q ss_pred CcceeeccCch
Q 012563 352 VGGFLTHSGWN 362 (460)
Q Consensus 352 ~~~~I~HGG~~ 362 (460)
+ ++.|.-.+
T Consensus 194 v--V~l~lPlt 202 (324)
T 3evt_A 194 F--IVNALPLT 202 (324)
T ss_dssp E--EEECCCCC
T ss_pred E--EEEcCCCc
Confidence 8 88887643
No 426
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=20.71 E-value=1.4e+02 Score=25.96 Aligned_cols=33 Identities=15% Similarity=0.065 Sum_probs=25.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
.|+++++.++.| --.++|+.|+++|++|++...
T Consensus 27 gk~vlVTGas~g---IG~aia~~la~~G~~V~~~~r 59 (266)
T 3grp_A 27 GRKALVTGATGG---IGEAIARCFHAQGAIVGLHGT 59 (266)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 367788866543 357899999999999998875
No 427
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=20.66 E-value=1.4e+02 Score=26.10 Aligned_cols=41 Identities=15% Similarity=0.132 Sum_probs=28.6
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCCCC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTKFNSPN 56 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~~~~~~ 56 (460)
.||||+.-==+. |---+..|++.|.+.| +|+++.++....-
T Consensus 1 ~M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg 41 (254)
T 2v4n_A 1 SMRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSG 41 (254)
T ss_dssp CCEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTT
T ss_pred CCeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcC
Confidence 378877764443 3334788999998876 9999999755433
No 428
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=20.63 E-value=3e+02 Score=22.79 Aligned_cols=43 Identities=7% Similarity=-0.050 Sum_probs=27.5
Q ss_pred eEEeccch-HH-HhccCCCcceeeccCchhhHHHHh---------hCCCeeecCc
Q 012563 336 YIVQWAPQ-QQ-VLAHPAVGGFLTHSGWNSTLESIC---------EGVPMICQPC 379 (460)
Q Consensus 336 ~~~~~vp~-~~-lL~~~~~~~~I~HGG~~s~~eal~---------~GvP~v~~P~ 379 (460)
.++++... .. +..++++ .++--||.||+-|... +++|++++-.
T Consensus 93 i~~~~~~~Rk~~m~~~sda-~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln~ 146 (189)
T 3sbx_A 93 VVTETMWERKQVMEDRANA-FITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLDP 146 (189)
T ss_dssp EEESSHHHHHHHHHHHCSE-EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECT
T ss_pred EEcCCHHHHHHHHHHHCCE-EEEeCCCcchHHHHHHHHHHHHhcccCCCEEEecC
Confidence 34454443 23 4455554 4666788999988753 5899999743
No 429
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=20.61 E-value=3.7e+02 Score=23.74 Aligned_cols=37 Identities=11% Similarity=0.105 Sum_probs=24.6
Q ss_pred cCHHHHHHHHHHHh---ccchHHHHHHHHHHHHHHHHHHH
Q 012563 404 LEKKEIETAIRRLM---VEAEGQEMRERITCLKKNVDACL 440 (460)
Q Consensus 404 ~~~~~l~~~i~~ll---~~~~~~~~~~~a~~l~~~~~~~~ 440 (460)
.-+..|++.|..++ .+.+...+-+.+.++++.+++..
T Consensus 172 ~lA~~ir~~ie~~l~~~p~~~~~~~~~~l~~~R~~ik~~~ 211 (274)
T 1kyq_A 172 RFGALVRDEIRNLFTQMGDLALEDAVVKLGELRRGIRLLA 211 (274)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhhC
Confidence 44577888888888 42223466777777787777643
No 430
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=20.61 E-value=46 Score=30.48 Aligned_cols=37 Identities=14% Similarity=0.310 Sum_probs=26.9
Q ss_pred cCCCCCcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 9 ISPRNGRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 9 ~~~~~~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
|+.....+|.++-.|.+|+ .+|..++.+|++|+++=.
T Consensus 1 Ma~p~~~~VaViGaG~MG~-----giA~~~a~~G~~V~l~D~ 37 (319)
T 3ado_A 1 MASPAAGDVLIVGSGLVGR-----SWAMLFASGGFRVKLYDI 37 (319)
T ss_dssp ------CEEEEECCSHHHH-----HHHHHHHHTTCCEEEECS
T ss_pred CCCCCCCeEEEECCcHHHH-----HHHHHHHhCCCeEEEEEC
Confidence 4455677899999988885 688899999999998854
No 431
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=20.55 E-value=1.1e+02 Score=27.11 Aligned_cols=34 Identities=9% Similarity=0.208 Sum_probs=26.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.|+++++.++.| =-.++|+.|+++|++|+++...
T Consensus 9 ~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 42 (285)
T 3sc4_A 9 GKTMFISGGSRG---IGLAIAKRVAADGANVALVAKS 42 (285)
T ss_dssp TCEEEEESCSSH---HHHHHHHHHHTTTCEEEEEESC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEECC
Confidence 457777766543 3568999999999999988764
No 432
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=20.46 E-value=1.7e+02 Score=25.45 Aligned_cols=37 Identities=19% Similarity=0.276 Sum_probs=27.2
Q ss_pred cEEEEEcCCCC----------CC-hHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 15 RRVILFPLPFQ----------GH-INPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~----------GH-v~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
+||+++..... |- ..=++.--..|.+.|++|+++++.
T Consensus 10 kkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~ 57 (247)
T 3n7t_A 10 RKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASET 57 (247)
T ss_dssp SEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47888776632 22 344677778999999999999974
No 433
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=20.44 E-value=1.1e+02 Score=26.58 Aligned_cols=33 Identities=15% Similarity=0.106 Sum_probs=25.7
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
.|+++++.++.| --.++|+.|+++|++|+++..
T Consensus 8 ~k~~lVTGas~G---IG~aia~~l~~~G~~V~~~~r 40 (265)
T 3lf2_A 8 EAVAVVTGGSSG---IGLATVELLLEAGAAVAFCAR 40 (265)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 467778866553 457899999999999988875
No 434
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=20.42 E-value=1.1e+02 Score=26.68 Aligned_cols=32 Identities=19% Similarity=0.177 Sum_probs=25.3
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 16 RVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 16 ~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
|.++++.++.| --.++|+.|+++|++|+++..
T Consensus 30 k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r 61 (271)
T 4iin_A 30 KNVLITGASKG---IGAEIAKTLASMGLKVWINYR 61 (271)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 56777755543 457899999999999998876
No 435
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Probab=20.38 E-value=79 Score=28.30 Aligned_cols=35 Identities=20% Similarity=0.340 Sum_probs=28.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEe
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIH 49 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~ 49 (460)
...+++.+|..+|..-...+++.|.++|+.|..+=
T Consensus 35 ~~~VvllHG~g~~~~~~~~~~~~L~~~G~~Vi~~D 69 (305)
T 1tht_A 35 NNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYD 69 (305)
T ss_dssp SCEEEEECTTCGGGGGGHHHHHHHHTTTCCEEEEC
T ss_pred CCEEEEecCCccCchHHHHHHHHHHHCCCEEEEee
Confidence 45677777888888888899999999999987653
No 436
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=20.33 E-value=1e+02 Score=27.18 Aligned_cols=33 Identities=12% Similarity=0.100 Sum_probs=25.7
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
.|+++++.++.| --.++|+.|+++|++|+++..
T Consensus 27 ~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r 59 (277)
T 4dqx_A 27 QRVCIVTGGGSG---IGRATAELFAKNGAYVVVADV 59 (277)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 467788866543 457899999999999998875
No 437
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=20.33 E-value=1.5e+02 Score=25.19 Aligned_cols=35 Identities=14% Similarity=0.263 Sum_probs=25.2
Q ss_pred EEEEEcCCCCC----ChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 16 RVILFPLPFQG----HINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 16 ~il~~~~~~~G----Hv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+|.+++....+ +..-...|++.|+++|+.|+.=+.
T Consensus 11 ~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg 49 (216)
T 1ydh_A 11 KICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGG 49 (216)
T ss_dssp EEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred eEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 69999766554 234678888899999998755443
No 438
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=20.29 E-value=44 Score=29.20 Aligned_cols=31 Identities=16% Similarity=0.144 Sum_probs=24.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCC-CeEEEEeC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKG-FSITIIHT 50 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rG-h~V~~~~~ 50 (460)
|||+|+-.|..| ..+|..|.++| |+|+++..
T Consensus 1 m~i~iiG~G~mG-----~~~a~~l~~~g~~~v~~~~r 32 (263)
T 1yqg_A 1 MNVYFLGGGNMA-----AAVAGGLVKQGGYRIYIANR 32 (263)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHHCSCEEEEECS
T ss_pred CEEEEECchHHH-----HHHHHHHHHCCCCeEEEECC
Confidence 688888766555 36788898899 99988765
No 439
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=20.19 E-value=1.3e+02 Score=26.56 Aligned_cols=34 Identities=26% Similarity=0.306 Sum_probs=26.0
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
+.++++++.++.| --.++|+.|+++|++|+++..
T Consensus 28 ~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 28 ARPVAIVTGGRRG---IGLGIARALAASGFDIAITGI 61 (280)
T ss_dssp CCCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEecCCCH---HHHHHHHHHHHCCCeEEEEeC
Confidence 3467788855543 457899999999999998874
No 440
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=20.18 E-value=1.2e+02 Score=26.60 Aligned_cols=34 Identities=9% Similarity=-0.057 Sum_probs=25.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
+++++++.++. - --.++|+.|.++|++|+++...
T Consensus 5 ~k~vlVTGas~-g--IG~~~a~~l~~~G~~V~~~~r~ 38 (281)
T 3m1a_A 5 AKVWLVTGASS-G--FGRAIAEAAVAAGDTVIGTARR 38 (281)
T ss_dssp CCEEEETTTTS-H--HHHHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEEECCCC-h--HHHHHHHHHHHCCCEEEEEeCC
Confidence 46777885543 2 3568899999999999988763
No 441
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=20.16 E-value=1.2e+02 Score=26.39 Aligned_cols=33 Identities=9% Similarity=0.088 Sum_probs=25.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
.|+++++.++.| --.++|+.|+++|++|+++..
T Consensus 20 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 52 (266)
T 4egf_A 20 GKRALITGATKG---IGADIARAFAAAGARLVLSGR 52 (266)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 367788866543 356899999999999988876
No 442
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=20.14 E-value=1e+02 Score=27.01 Aligned_cols=33 Identities=6% Similarity=0.016 Sum_probs=27.3
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
-|+++++.++.| =-.++|+.|++.|.+|.++..
T Consensus 7 gKvalVTGas~G---IG~aiA~~la~~Ga~Vv~~~~ 39 (254)
T 4fn4_A 7 NKVVIVTGAGSG---IGRAIAKKFALNDSIVVAVEL 39 (254)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHcCCEEEEEEC
Confidence 478899977775 468899999999999988765
No 443
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=20.11 E-value=84 Score=30.96 Aligned_cols=33 Identities=15% Similarity=0.088 Sum_probs=28.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~ 50 (460)
.+||.|+-.++.| |..+|+.|.++|++|+..=.
T Consensus 19 ~~~i~~iGiGg~G----ms~lA~~l~~~G~~V~~sD~ 51 (524)
T 3hn7_A 19 GMHIHILGICGTF----MGSLALLARALGHTVTGSDA 51 (524)
T ss_dssp CCEEEEETTTSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEEEecHhh----HHHHHHHHHhCCCEEEEECC
Confidence 5789999998777 77899999999999987654
No 444
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=20.08 E-value=55 Score=27.94 Aligned_cols=28 Identities=11% Similarity=0.220 Sum_probs=21.2
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEe
Q 012563 17 VILFPLPFQGHINPMLQLGSILYSKGFSITIIH 49 (460)
Q Consensus 17 il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~ 49 (460)
|+|+-.|-- -+.+|..|+++|++|+++=
T Consensus 5 V~IIGaGpa-----GL~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 5 IAIIGTGIA-----GLSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp EEEECCSHH-----HHHHHHHHHHTTCCEEEEC
T ss_pred EEEECcCHH-----HHHHHHHHHHCCCCEEEEE
Confidence 555554433 3789999999999999984
No 445
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=20.04 E-value=1.2e+02 Score=26.07 Aligned_cols=35 Identities=14% Similarity=-0.057 Sum_probs=25.3
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHh-CCCeEEEEeCC
Q 012563 14 GRRVILFPLPFQGHINPMLQLGSILYS-KGFSITIIHTK 51 (460)
Q Consensus 14 ~~~il~~~~~~~GHv~p~l~lA~~L~~-rGh~V~~~~~~ 51 (460)
+++.++++.++ |- --..+|+.|++ +|++|+++...
T Consensus 3 ~~k~vlITGas-gg--IG~~~a~~L~~~~g~~V~~~~r~ 38 (276)
T 1wma_A 3 GIHVALVTGGN-KG--IGLAIVRDLCRLFSGDVVLTARD 38 (276)
T ss_dssp CCCEEEESSCS-SH--HHHHHHHHHHHHSSSEEEEEESS
T ss_pred CCCEEEEeCCC-cH--HHHHHHHHHHHhcCCeEEEEeCC
Confidence 34566777444 43 35688999999 99999998763
No 446
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=20.03 E-value=1.5e+02 Score=26.38 Aligned_cols=34 Identities=12% Similarity=0.182 Sum_probs=26.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.|+++++.++.| =-.++|+.|+++|++|+++...
T Consensus 41 ~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~r~ 74 (293)
T 3rih_A 41 ARSVLVTGGTKG---IGRGIATVFARAGANVAVAARS 74 (293)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEECC
Confidence 467888866543 3568999999999999998763
No 447
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=20.00 E-value=1e+02 Score=27.36 Aligned_cols=34 Identities=15% Similarity=0.063 Sum_probs=26.3
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 012563 15 RRVILFPLPFQGHINPMLQLGSILYSKGFSITIIHTK 51 (460)
Q Consensus 15 ~~il~~~~~~~GHv~p~l~lA~~L~~rGh~V~~~~~~ 51 (460)
.|+++++.++.| --.++|+.|+++|++|+++...
T Consensus 47 gk~vlVTGas~G---IG~aia~~la~~G~~V~~~~r~ 80 (291)
T 3ijr_A 47 GKNVLITGGDSG---IGRAVSIAFAKEGANIAIAYLD 80 (291)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 467788866553 3578999999999999988763
Done!