BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012568
(460 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3AHQ|A Chain A, Hyperactive Human Ero1
Length = 465
Score = 207 bits (528), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 143/419 (34%), Positives = 204/419 (48%), Gaps = 71/419 (16%)
Query: 71 TGMVEDCCCDYETVDSVNGEVLHPLLQQLVTTPFFRYFKAKLWCDCPFWPDDGMCRLRDC 130
+G ++DC CD ET+D N L P LQ+L+ + +FRY+K L CPFW D C RDC
Sbjct: 37 SGYLDDCTCDVETIDRFNNYRLFPRLQKLLESDYFRYYKVNLKRPCPFWNDISQCGRRDC 96
Query: 131 SVXXXXXXXXXXXXXXXXHILP--SDDLMCQEGKPE--ATVDRTLD---KRAFRGWIETD 183
+V + +++L+ + + E VD +L ++A W + D
Sbjct: 97 AVKPAQSDEVPDGIKSASYKYSEEANNLIEEAEQAERLGAVDESLSEETQKAVLQWTKHD 156
Query: 184 NPWTNDDETDN---GEMTYVNLLLNPERYTGYTGPSARRIWDAVYTENCPKWMAIV-PAN 239
+ N E D+ E YV+LLLNPERYTGY GP A +IW+ +Y ENC K I P N
Sbjct: 157 DSSDNFAEADDIQSPEAEYVDLLLNPERYTGYKGPDAWKIWNVIYEENCFKPQTIKRPLN 216
Query: 240 P----------------------------------QTRPNPPAKTRPL--------RWGK 257
P N R L +WG
Sbjct: 217 PLASGQGTSEENTFYSWLEGLCVEKRAFYRLISGLHASINVHLSARYLLQETWLEKKWGH 276
Query: 258 NP---ELMYDRVLRYQD---RVRNLYFTFLFVLRAVTKATDYLEQAEYD--TGNHEDDLK 309
N + +D +L + R++NLYF +L LRA++K + E+ ++ TGN D +
Sbjct: 277 NITEFQQRFDGILTEGEGPRRLKNLYFLYLIELRALSKVLPFFERPDFQLFTGNKIQDEE 336
Query: 310 TVSLMKQLLYNPKLQAACPLPFDEAKLWQG--QSGPELKQQIQEQFRNISALMDCVGCEK 367
L+ ++L+ K + PL FDE + G + +LK+ + FRNIS +MDCVGC K
Sbjct: 337 NKMLLLEILHEIK---SFPLHFDENSFFAGDKKEAHKLKEDFRLHFRNISRIMDCVGCFK 393
Query: 368 CRLWGKLQVLGLGTALKILFSVE-----GQNHAAQSLQLQRNEVIALVNLLNRLSESVK 421
CRLWGKLQ GLGTALKILFS + ++ + L R E+++L N R+S SVK
Sbjct: 394 CRLWGKLQTQGLGTALKILFSEKLIANMPESGPSYEFHLTRQEIVSLFNAFGRISTSVK 452
>pdb|3AHR|A Chain A, Inactive Human Ero1
Length = 465
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 142/419 (33%), Positives = 204/419 (48%), Gaps = 71/419 (16%)
Query: 71 TGMVEDCCCDYETVDSVNGEVLHPLLQQLVTTPFFRYFKAKLWCDCPFWPDDGMCRLRDC 130
+G ++DC CD ET+D N L P LQ+L+ + +FRY+K L CPFW D C RD
Sbjct: 37 SGYLDDCTCDVETIDRFNNYRLFPRLQKLLESDYFRYYKVNLKRPCPFWNDISQCGRRDA 96
Query: 131 SVXXXXXXXXXXXXXXXXHILP--SDDLM--CQEGKPEATVDRTLD---KRAFRGWIETD 183
+V + +++L+ C++ + VD +L ++A W + D
Sbjct: 97 AVKPAQSDEVPDGIKSASYKYSEEANNLIEECEQAERLGAVDESLSEETQKAVLQWTKHD 156
Query: 184 NPWTNDDETDN---GEMTYVNLLLNPERYTGYTGPSARRIWDAVYTENCPKWMAIV-PAN 239
+ N E D+ E YV+LLLNPERYTGY GP A +IW+ +Y ENC K I P N
Sbjct: 157 DSSDNFAEADDIQSPEAEYVDLLLNPERYTGYKGPDAWKIWNVIYEENCFKPQTIKRPLN 216
Query: 240 P----------------------------------QTRPNPPAKTRPL--------RWGK 257
P N R L +WG
Sbjct: 217 PLASGQGTSEENTFYSWLEGLCVEKRAFYRLISGLHASINVHLSARYLLQETWLEKKWGH 276
Query: 258 NP---ELMYDRVLRYQD---RVRNLYFTFLFVLRAVTKATDYLEQAEYD--TGNHEDDLK 309
N + +D +L + R++NLYF +L LRA++K + E+ ++ TGN D +
Sbjct: 277 NITEFQQRFDGILTEGEGPRRLKNLYFLYLIELRALSKVLPFFERPDFQLFTGNKIQDEE 336
Query: 310 TVSLMKQLLYNPKLQAACPLPFDEAKLWQG--QSGPELKQQIQEQFRNISALMDCVGCEK 367
L+ ++L+ K + PL FDE + G + +LK+ + FRNIS +MDCVGC K
Sbjct: 337 NKMLLLEILHEIK---SFPLHFDENSFFAGDKKEAHKLKEDFRLHFRNISRIMDCVGCFK 393
Query: 368 CRLWGKLQVLGLGTALKILFSVE-----GQNHAAQSLQLQRNEVIALVNLLNRLSESVK 421
CRLWGKLQ GLGTALKILFS + ++ + L R E+++L N R+S SVK
Sbjct: 394 CRLWGKLQTQGLGTALKILFSEKLIANMPESGPSYEFHLTRQEIVSLFNAFGRISTSVK 452
>pdb|3NVJ|A Chain A, Crystal Structure Of The C143aC166A MUTANT OF ERO1P
Length = 393
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 181/396 (45%), Gaps = 65/396 (16%)
Query: 81 YETVDSVNGEVLHPLLQQLVTTPFFRYFKAKLWCDCPFW-PDDGMCRLRDCSVXXXX--- 136
+ ++++N E + L L+ + FF+YF+ L+ C FW +DG+C R CSV
Sbjct: 18 FNELNAIN-ENIRDDLSALLKSDFFKYFRLDLYKQCSFWDANDGLCLNRACSVDVVEDWD 76
Query: 137 --------XXXXXXXXXXXXHILPSDD------LMCQEGKPEATVDRTLDKRAFRGWIET 182
SDD +CQ K ++ T++
Sbjct: 77 TLPEYWQPEILGSFNNDTMKEADDSDDEAKFLDQLCQTSKKPVDIEDTIN---------- 126
Query: 183 DNPWTNDDETDNGEMTYVNLLLNPERYTGYTGPSARRIWDAVYTENC------------P 230
+ + ++ + ++L NPER+TGY G A +IW +Y +NC
Sbjct: 127 ---YADVNDFNGKNAVLIDLTANPERFTGYGGKQAGQIWSTIYQDNCFTIGETGESLAKD 183
Query: 231 KWMAIVPANPQTRPNPPAK----TRPLRWGKNPELMYDRVLRYQDRVRNLYFTFLFVLRA 286
+ +V + +K T+ +W N +L R+ + DRV N+YF + V +A
Sbjct: 184 AFYRLVSGFHASIGTHLSKEYLNTKTGKWEPNLDLFMARIGNFPDRVTNMYFNYAVVAKA 243
Query: 287 VTKATDYLEQAEY-DTGNHEDDLKTVSLMKQLLYNPKLQAACPLPFDEAKLWQGQSGPEL 345
+ K YL + + D N E K +++ QL + K+ F+E ++ L
Sbjct: 244 LWKIQPYLPEFSFCDLVNKEIKNKMDNVISQL--DTKI-------FNEDLVFANDLSLTL 294
Query: 346 KQQIQEQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSVEGQNHAAQSL---QLQ 402
K + + +F+N++ +MDCV C++CRLWGK+Q G TALKILF + + + +L
Sbjct: 295 KDEFRSRFKNVTKIMDCVQCDRCRLWGKIQTTGYATALKILFEINDADEFTKQHIVGKLT 354
Query: 403 RNEVIALVNLLNRLSESVKIVHEMGPSIEKIMEKKI 438
+ E+IAL+ RLSES++ V+ EK+ K++
Sbjct: 355 KYELIALLQTFGRLSESIESVN----MFEKMYGKRL 386
>pdb|1RQ1|A Chain A, Structure Of Ero1p, Source Of Disulfide Bonds For
Oxidative Protein Folding In The Cell
Length = 386
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 181/396 (45%), Gaps = 65/396 (16%)
Query: 81 YETVDSVNGEVLHPLLQQLVTTPFFRYFKAKLWCDCPFW-PDDGMCRLRDCSVXXXX--- 136
+ ++++N E + L L+ + FF+YF+ L+ C FW +DG+C R CSV
Sbjct: 18 FNELNAIN-ENIRDDLSALLKSDFFKYFRLDLYKQCSFWDANDGLCLNRACSVDVVEDWD 76
Query: 137 --------XXXXXXXXXXXXHILPSDD------LMCQEGKPEATVDRTLDKRAFRGWIET 182
SDD +CQ K ++ T++
Sbjct: 77 TLPEYWQPEILGSFNNDTMKEADDSDDECKFLDQLCQTSKKPVDIEDTIN---------- 126
Query: 183 DNPWTNDDETDNGEMTYVNLLLNPERYTGYTGPSARRIWDAVYTENC------------P 230
+ + ++ + ++L NPER+TGY G A +IW +Y +NC
Sbjct: 127 ---YCDVNDFNGKNAVLIDLTANPERFTGYGGKQAGQIWSTIYQDNCFTIGETGESLAKD 183
Query: 231 KWMAIVPANPQTRPNPPAK----TRPLRWGKNPELMYDRVLRYQDRVRNLYFTFLFVLRA 286
+ +V + +K T+ +W N +L R+ + DRV N+YF + V +A
Sbjct: 184 AFYRLVSGFHASIGTHLSKEYLNTKTGKWEPNLDLFMARIGNFPDRVTNMYFNYAVVAKA 243
Query: 287 VTKATDYLEQAEY-DTGNHEDDLKTVSLMKQLLYNPKLQAACPLPFDEAKLWQGQSGPEL 345
+ K YL + + D N E K +++ QL + K+ F+E ++ L
Sbjct: 244 LWKIQPYLPEFSFCDLVNKEIKNKMDNVISQL--DTKI-------FNEDLVFANDLSLTL 294
Query: 346 KQQIQEQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSVEGQNHAAQSL---QLQ 402
K + + +F+N++ +MDCV C++CRLWGK+Q G TALKILF + + + +L
Sbjct: 295 KDEFRSRFKNVTKIMDCVQCDRCRLWGKIQTTGYATALKILFEINDADEFTKQHIVGKLT 354
Query: 403 RNEVIALVNLLNRLSESVKIVHEMGPSIEKIMEKKI 438
+ E+IAL+ RLSES++ V+ EK+ K++
Sbjct: 355 KYELIALLQTFGRLSESIESVN----MFEKMYGKRL 386
>pdb|3M31|A Chain A, Structure Of The C150aC295A MUTANT OF S. CEREVISIAE ERO1P
Length = 388
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 181/383 (47%), Gaps = 39/383 (10%)
Query: 81 YETVDSVNGEVLHPLLQQLVTTPFFRYFKAKLWCDCPFW-PDDGMCRLRDCSVXXXXXXX 139
+ ++++N E + L L+ + FF+YF+ L+ C FW +DG+C R CSV
Sbjct: 17 FNELNAIN-ENIRDDLSALLKSDFFKYFRLDLYKQCSFWDANDGLCLNRACSVDVVEDWD 75
Query: 140 XXXXXXXXXHILPSDDLMCQEGKPEATVDRTLDKRAFRGW----IETDNPWTNDDETDNG 195
+ ++ +E + LD+ A IE + + ++ +
Sbjct: 76 TLPEYWQPEILGSFNNDTMKEADDSDDECKFLDQLAQTSKKPVDIEDTINYCDVNDFNGK 135
Query: 196 EMTYVNLLLNPERYTGYTGPSARRIWDAVYTENC------------PKWMAIVPANPQTR 243
++L NPER+TGY G A +IW +Y +NC + +V +
Sbjct: 136 NAVLIDLTANPERFTGYGGKQAGQIWSTIYQDNCFTIGETGESLAKDAFYRLVSGFHASI 195
Query: 244 PNPPAK----TRPLRWGKNPELMYDRVLRYQDRVRNLYFTFLFVLRAVTKATDYLEQAEY 299
+K T+ +W N +L R+ + DRV N+YF + V +A+ K YL + +
Sbjct: 196 GTHLSKEYLNTKTGKWEPNLDLFMARIGNFPDRVTNMYFNYAVVAKALWKIQPYLPEFSF 255
Query: 300 -DTGNHEDDLKTVSLMKQLLYNPKLQAACPLPFDEAKLWQGQSGPELKQQIQEQFRNISA 358
D N E K +++ QL + K+ F+E ++ LK + + +F+N++
Sbjct: 256 ADLVNKEIKNKMDNVISQL--DTKI-------FNEDLVFANDLSLTLKDEFRSRFKNVTK 306
Query: 359 LMDCVGCEKCRLWGKLQVLGLGTALKILFSVEGQNHAAQSL---QLQRNEVIALVNLLNR 415
+MDCV C++CRLWGK+Q G TALKILF + + + +L + E+IAL+ R
Sbjct: 307 IMDCVQCDRCRLWGKIQTTGYATALKILFEINDADEFTKQHIVGKLTKYELIALLQTFGR 366
Query: 416 LSESVKIVHEMGPSIEKIMEKKI 438
LSES++ V+ EK+ K++
Sbjct: 367 LSESIESVN----MFEKMYGKRL 385
>pdb|1RP4|A Chain A, Structure Of Ero1p, Source Of Disulfide Bonds For
Oxidative Protein Folding In The Cell
Length = 389
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 174/382 (45%), Gaps = 61/382 (15%)
Query: 81 YETVDSVNGEVLHPLLQQLVTTPFFRYFKAKLWCDCPFW-PDDGMCRLRDCSVXXXX--- 136
+ ++++N E + L L+ + FF+YF+ L+ C FW +DG+C R CSV
Sbjct: 18 FNELNAIN-ENIRDDLSALLKSDFFKYFRLDLYKQCSFWDANDGLCLNRACSVDVVEDWD 76
Query: 137 --------XXXXXXXXXXXXHILPSDD------LMCQEGKPEATVDRTLDKRAFRGWIET 182
SDD +CQ K ++ T++
Sbjct: 77 TLPEYWQPEILGSFNNDTXKEADDSDDECKFLDQLCQTSKKPVDIEDTIN---------- 126
Query: 183 DNPWTNDDETDNGEMTYVNLLLNPERYTGYTGPSARRIWDAVYTENC------------P 230
+ + ++ + ++L NPER+TGY G A +IW +Y +NC
Sbjct: 127 ---YCDVNDFNGKNAVLIDLTANPERFTGYGGKQAGQIWSTIYQDNCFTIGETGESLAKD 183
Query: 231 KWMAIVPANPQTRPNPPAK----TRPLRWGKNPELMYDRVLRYQDRVRNLYFTFLFVLRA 286
+ +V + +K T+ +W N +L R+ + DRV N YF + V +A
Sbjct: 184 AFYRLVSGFHASIGTHLSKEYLNTKTGKWEPNLDLFXARIGNFPDRVTNXYFNYAVVAKA 243
Query: 287 VTKATDYLEQAEY-DTGNHEDDLKTVSLMKQLLYNPKLQAACPLPFDEAKLWQGQSGPEL 345
+ K YL + + D N E K +++ QL + K+ F+E ++ L
Sbjct: 244 LWKIQPYLPEFSFCDLVNKEIKNKXDNVISQL--DTKI-------FNEDLVFANDLSLTL 294
Query: 346 KQQIQEQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSVEGQNHAAQSL---QLQ 402
K + + +F+N++ + DCV C++CRLWGK+Q G TALKILF + + + +L
Sbjct: 295 KDEFRSRFKNVTKIXDCVQCDRCRLWGKIQTTGYATALKILFEINDADEFTKQHIVGKLT 354
Query: 403 RNEVIALVNLLNRLSESVKIVH 424
+ E+IAL+ RLSES++ V+
Sbjct: 355 KYELIALLQTFGRLSESIESVN 376
>pdb|2IGL|A Chain A, Crystal Structure Of E. Coli Yedx, A Transthyretin Related
Protein
pdb|2IGL|B Chain B, Crystal Structure Of E. Coli Yedx, A Transthyretin Related
Protein
pdb|2IGL|C Chain C, Crystal Structure Of E. Coli Yedx, A Transthyretin Related
Protein
pdb|2IGL|D Chain D, Crystal Structure Of E. Coli Yedx, A Transthyretin Related
Protein
Length = 118
Score = 32.7 bits (73), Expect = 0.47, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 149 HILPSDDLMCQEGKPEATVDRTLDKRAFRGWIETDNPWTNDD 190
+IL L Q GKP A V TL+K+A GW++ + T+ D
Sbjct: 8 NILSVHILNQQTGKPAADVTVTLEKKADNGWLQLNTAKTDKD 49
>pdb|2G2N|A Chain A, Crystal Structure Of E.Coli Transthyretin-Related Protein
With Bound Zn
pdb|2G2N|B Chain B, Crystal Structure Of E.Coli Transthyretin-Related Protein
With Bound Zn
pdb|2G2N|C Chain C, Crystal Structure Of E.Coli Transthyretin-Related Protein
With Bound Zn
pdb|2G2N|D Chain D, Crystal Structure Of E.Coli Transthyretin-Related Protein
With Bound Zn
pdb|2G2P|A Chain A, Crystal Structure Of E.coli Transthyretin-related Protein
With Bound Zn And Br
pdb|2G2P|B Chain B, Crystal Structure Of E.coli Transthyretin-related Protein
With Bound Zn And Br
pdb|2G2P|C Chain C, Crystal Structure Of E.coli Transthyretin-related Protein
With Bound Zn And Br
pdb|2G2P|D Chain D, Crystal Structure Of E.coli Transthyretin-related Protein
With Bound Zn And Br
Length = 114
Score = 32.3 bits (72), Expect = 0.53, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 149 HILPSDDLMCQEGKPEATVDRTLDKRAFRGWIETDNPWTNDD 190
+IL L Q GKP A V TL+K+A GW++ + T+ D
Sbjct: 4 NILSVHILNQQTGKPAADVTVTLEKKADNGWLQLNTAKTDKD 45
>pdb|2JFD|A Chain A, Structure Of The Mat Domain Of Human Fas
pdb|2JFD|B Chain B, Structure Of The Mat Domain Of Human Fas
pdb|2JFD|C Chain C, Structure Of The Mat Domain Of Human Fas
pdb|2JFD|D Chain D, Structure Of The Mat Domain Of Human Fas
Length = 425
Score = 32.0 bits (71), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 275 NLYFTFLFVLRAVTKATDYLEQAEYDTGNHEDDLKTVSLMKQLLYNPKLQAACPLPFDEA 334
NLYF + +LRA + + +++ H DL +S++ + P A +PF
Sbjct: 17 NLYFQSMRLLRASGRTPEAVQKLLEQGLRHSQDLAFLSMLNDIAAVP----ATAMPFRGY 72
Query: 335 KLWQGQ-SGPELKQ 347
+ G+ GPE++Q
Sbjct: 73 AVLGGERGGPEVQQ 86
>pdb|2JFK|A Chain A, Structure Of The Mat Domain Of Human Fas With Malonyl-Coa
pdb|2JFK|B Chain B, Structure Of The Mat Domain Of Human Fas With Malonyl-Coa
pdb|2JFK|C Chain C, Structure Of The Mat Domain Of Human Fas With Malonyl-Coa
pdb|2JFK|D Chain D, Structure Of The Mat Domain Of Human Fas With Malonyl-Coa
Length = 433
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 275 NLYFTFLFVLRAVTKATDYLEQAEYDTGNHEDDLKTVSLMKQLLYNPKLQAACPLPFDEA 334
NLYF + +LRA + + +++ H DL +S++ + P A +PF
Sbjct: 17 NLYFQSMRLLRASGRTPEAVQKLLEQGLRHSQDLAFLSMLNDIAAVP----ATAMPFRGY 72
Query: 335 KLWQGQ-SGPELKQ 347
+ G+ GPE++Q
Sbjct: 73 AVLGGERGGPEVQQ 86
>pdb|1DQ8|A Chain A, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Hmg And Coa
pdb|1DQ8|B Chain B, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Hmg And Coa
pdb|1DQ8|C Chain C, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Hmg And Coa
pdb|1DQ8|D Chain D, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Hmg And Coa
pdb|1DQ9|A Chain A, Complex Of Catalytic Portion Of Human Hmg-Coa Reductase
With Hmg-Coa
pdb|1DQ9|B Chain B, Complex Of Catalytic Portion Of Human Hmg-Coa Reductase
With Hmg-Coa
pdb|1DQ9|C Chain C, Complex Of Catalytic Portion Of Human Hmg-Coa Reductase
With Hmg-Coa
pdb|1DQ9|D Chain D, Complex Of Catalytic Portion Of Human Hmg-Coa Reductase
With Hmg-Coa
pdb|1DQA|A Chain A, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Hmg, Coa, And Nadp+
pdb|1DQA|B Chain B, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Hmg, Coa, And Nadp+
pdb|1DQA|C Chain C, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Hmg, Coa, And Nadp+
pdb|1DQA|D Chain D, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Hmg, Coa, And Nadp+
pdb|1HW8|A Chain A, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Compactin (Also Known As Mevastatin)
pdb|1HW8|B Chain B, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Compactin (Also Known As Mevastatin)
pdb|1HW8|C Chain C, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Compactin (Also Known As Mevastatin)
pdb|1HW8|D Chain D, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Compactin (Also Known As Mevastatin)
pdb|1HW9|A Chain A, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Simvastatin
pdb|1HW9|B Chain B, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Simvastatin
pdb|1HW9|C Chain C, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Simvastatin
pdb|1HW9|D Chain D, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Simvastatin
pdb|1HWI|A Chain A, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Fluvastatin
pdb|1HWI|B Chain B, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Fluvastatin
pdb|1HWI|C Chain C, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Fluvastatin
pdb|1HWI|D Chain D, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Fluvastatin
pdb|1HWJ|A Chain A, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Cerivastatin
pdb|1HWJ|B Chain B, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Cerivastatin
pdb|1HWJ|C Chain C, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Cerivastatin
pdb|1HWJ|D Chain D, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Cerivastatin
pdb|1HWK|A Chain A, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Atorvastatin
pdb|1HWK|B Chain B, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Atorvastatin
pdb|1HWK|C Chain C, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Atorvastatin
pdb|1HWK|D Chain D, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Atorvastatin
pdb|1HWL|A Chain A, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Rosuvastatin (Formally Known As Zd4522)
pdb|1HWL|B Chain B, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Rosuvastatin (Formally Known As Zd4522)
pdb|1HWL|C Chain C, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Rosuvastatin (Formally Known As Zd4522)
pdb|1HWL|D Chain D, Complex Of The Catalytic Portion Of Human Hmg-Coa
Reductase With Rosuvastatin (Formally Known As Zd4522)
Length = 467
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query: 401 LQRNEVIALVNLLNRLS---ESVKIVHEMGPSIEK-IMEKKISDPSALEFSKWR 450
L E+I LVN + + E++ HE G SI + ++ KK+S+PS+L++ +R
Sbjct: 41 LSDAEIIQLVNAKHIPAYKLETLIETHERGVSIRRQLLSKKLSEPSSLQYLPYR 94
>pdb|2Q1L|A Chain A, Design And Synthesis Of Pyrrole-Based, Hepatoselective
Hmg-Coa Reductase Inhibitors
pdb|2Q1L|B Chain B, Design And Synthesis Of Pyrrole-Based, Hepatoselective
Hmg-Coa Reductase Inhibitors
pdb|2Q1L|C Chain C, Design And Synthesis Of Pyrrole-Based, Hepatoselective
Hmg-Coa Reductase Inhibitors
pdb|2Q1L|D Chain D, Design And Synthesis Of Pyrrole-Based, Hepatoselective
Hmg-Coa Reductase Inhibitors
pdb|2Q6B|A Chain A, Design And Synthesis Of Novel, Conformationally Restricted
Hmg-Coa Reductase Inhibitors
pdb|2Q6B|B Chain B, Design And Synthesis Of Novel, Conformationally Restricted
Hmg-Coa Reductase Inhibitors
pdb|2Q6B|C Chain C, Design And Synthesis Of Novel, Conformationally Restricted
Hmg-Coa Reductase Inhibitors
pdb|2Q6B|D Chain D, Design And Synthesis Of Novel, Conformationally Restricted
Hmg-Coa Reductase Inhibitors
pdb|2Q6C|A Chain A, Design And Synthesis Of Novel, Conformationally Restricted
Hmg-Coa Reductase Inhibitors
pdb|2Q6C|B Chain B, Design And Synthesis Of Novel, Conformationally Restricted
Hmg-Coa Reductase Inhibitors
pdb|2Q6C|C Chain C, Design And Synthesis Of Novel, Conformationally Restricted
Hmg-Coa Reductase Inhibitors
pdb|2Q6C|D Chain D, Design And Synthesis Of Novel, Conformationally Restricted
Hmg-Coa Reductase Inhibitors
pdb|3BGL|A Chain A, Hepatoselectivity Of Statins: Design And Synthesis Of 4-
Sulfamoyl Pyrroles As Hmg-Coa Reductase Inhibitors
pdb|3BGL|B Chain B, Hepatoselectivity Of Statins: Design And Synthesis Of 4-
Sulfamoyl Pyrroles As Hmg-Coa Reductase Inhibitors
pdb|3BGL|C Chain C, Hepatoselectivity Of Statins: Design And Synthesis Of 4-
Sulfamoyl Pyrroles As Hmg-Coa Reductase Inhibitors
pdb|3BGL|D Chain D, Hepatoselectivity Of Statins: Design And Synthesis Of 4-
Sulfamoyl Pyrroles As Hmg-Coa Reductase Inhibitors
pdb|2R4F|A Chain A, Substituted Pyrazoles As Hepatselective Hmg-Coa Reductase
Inhibitors
pdb|2R4F|B Chain B, Substituted Pyrazoles As Hepatselective Hmg-Coa Reductase
Inhibitors
pdb|2R4F|C Chain C, Substituted Pyrazoles As Hepatselective Hmg-Coa Reductase
Inhibitors
pdb|2R4F|D Chain D, Substituted Pyrazoles As Hepatselective Hmg-Coa Reductase
Inhibitors
pdb|3CCT|A Chain A, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CCT|B Chain B, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CCT|C Chain C, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CCT|D Chain D, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CCW|A Chain A, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CCW|B Chain B, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CCW|C Chain C, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CCW|D Chain D, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CCZ|A Chain A, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CCZ|B Chain B, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CCZ|C Chain C, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CCZ|D Chain D, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CD0|A Chain A, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CD0|B Chain B, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CD0|C Chain C, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CD0|D Chain D, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CD5|A Chain A, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CD5|B Chain B, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CD5|C Chain C, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CD5|D Chain D, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CD7|A Chain A, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CD7|B Chain B, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CD7|C Chain C, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CD7|D Chain D, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CDA|A Chain A, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CDA|B Chain B, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CDA|C Chain C, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CDA|D Chain D, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CDB|A Chain A, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CDB|B Chain B, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CDB|C Chain C, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
pdb|3CDB|D Chain D, Thermodynamic And Structure Guided Design Of Statin
Hmg-Coa Reductase Inhibitors
Length = 441
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query: 401 LQRNEVIALVNLLNRLS---ESVKIVHEMGPSIEK-IMEKKISDPSALEFSKWR 450
L E+I LVN + + E++ HE G SI + ++ KK+S+PS+L++ +R
Sbjct: 28 LSDAEIIQLVNAKHIPAYKLETLIETHERGVSIRRQLLSKKLSEPSSLQYLPYR 81
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.135 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,247,019
Number of Sequences: 62578
Number of extensions: 519262
Number of successful extensions: 1136
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1104
Number of HSP's gapped (non-prelim): 24
length of query: 460
length of database: 14,973,337
effective HSP length: 102
effective length of query: 358
effective length of database: 8,590,381
effective search space: 3075356398
effective search space used: 3075356398
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)