Query 012568
Match_columns 460
No_of_seqs 147 out of 258
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 11:59:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012568.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012568hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ahq_A ERO1-like protein alpha 100.0 8E-135 3E-139 1054.7 5.7 369 53-432 27-463 (465)
2 3m31_A Endoplasmic oxidoreduct 100.0 2E-123 8E-128 946.8 14.0 348 70-434 8-385 (388)
3 3qrx_B Melittin; calcium-bindi 28.6 17 0.0006 23.5 0.8 11 378-388 1-11 (26)
4 1ash_A Hemoglobin (OXY); oxyge 23.6 79 0.0027 28.0 4.4 53 406-458 66-118 (150)
5 2wfu_A Probable insulin-like p 23.6 16 0.00055 23.9 -0.1 15 72-86 1-18 (26)
6 1pid_A Despentapeptide insulin 23.3 16 0.00055 23.9 -0.2 15 72-86 1-18 (26)
7 2k72_A Matrix metalloproteinas 19.8 13 0.00044 25.4 -1.2 18 110-127 4-21 (37)
8 2wfv_A Probable insulin-like p 18.7 20 0.0007 23.4 -0.4 16 71-86 3-21 (26)
9 4e29_A Chimeric WZZB chain len 15.7 1.5E+02 0.0052 28.5 4.8 40 375-425 24-63 (248)
10 2rng_A BIG defensin; alpha-hel 14.7 27 0.00091 28.3 -0.7 55 19-90 14-68 (79)
No 1
>3ahq_A ERO1-like protein alpha; disulfide bond, PDI, redox, hyperactive human ERO1, oxidored; HET: FAD; 2.35A {Homo sapiens} PDB: 3ahr_A*
Probab=100.00 E-value=7.9e-135 Score=1054.66 Aligned_cols=369 Identities=37% Similarity=0.678 Sum_probs=292.1
Q ss_pred CCCCcccccCCCCCCccccccccCcccchhhHHhhhhchhhHHhHHhhcCCcceeEeccCCCCCCCCCCCCCCCCCCCcc
Q 012568 53 NNQTSCHCSSSSQDSVKYTGMVEDCCCDYETVDSVNGEVLHPLLQQLVTTPFFRYFKAKLWCDCPFWPDDGMCRLRDCSV 132 (460)
Q Consensus 53 ~~~~~c~c~~~~~~~~~~~g~vdDc~c~~etId~~N~~~l~P~L~~L~~t~fFRyfKVnL~~~CPFW~dd~~C~~~~C~V 132 (460)
+..+.|||+ ++|+|+||||+|+|||++|++.|+|+|++|+++||||||||||+++||||+|+++|++++|+|
T Consensus 27 ~~~~~c~c~--------~~g~v~Dc~c~~etId~~N~~~i~p~L~~L~~t~fFRyfkVnL~k~CPFW~d~~~C~~~~C~V 98 (465)
T 3ahq_A 27 TAAQRCFCQ--------VSGYLDDCTCDVETIDRFNNYRLFPRLQKLLESDYFRYYKVNLKRPCPFWNDISQCGRRDCAV 98 (465)
T ss_dssp ----CEEEE--------CSSSSCEEECCHHHHHHHHHHTTHHHHHHHHHSHHHHEEEECCCCCCSSCC------------
T ss_pred CCCCCcccC--------CCCccccCcCCHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCCCCCCCCccCCcCCCCCee
Confidence 556789999 999999999999999999998899999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCC----ccccccCCCCcccccccc---hhhhcCccccCCC---CCCCCCCCCCCceEeeC
Q 012568 133 CECPENEFPEPFKKPFHILPSD----DLMCQEGKPEATVDRTLD---KRAFRGWIETDNP---WTNDDETDNGEMTYVNL 202 (460)
Q Consensus 133 ~~c~e~eiP~~wr~~~~~~~~~----~~~c~~~~~~~~vd~tl~---~~~~~~w~~~d~~---~~~dDe~d~~~~~YVDL 202 (460)
++|+|+|||++||++..+++.. ...|++...++.||++++ ...|.+|.++|++ +|..||+++++++||||
T Consensus 99 ~~c~e~eiP~~wr~~~~~~~~~~~~~~~~c~~~~~lg~vd~tls~~~~~~~~~w~~~dd~~~~fC~~dDe~~~~~~YVdL 178 (465)
T 3ahq_A 99 KPAQSDEVPDGIKSASYKYSEEANNLIEEAEQAERLGAVDESLSEETQKAVLQWTKHDDSSDNFAEADDIQSPEAEYVDL 178 (465)
T ss_dssp ------------------------------CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHTTCC-------CCSCEEEEG
T ss_pred ecCCcccCChhhcccccccchhhccccccccccccccccccccchhhhhhhhccccccCcccccccccCCCCCCceEEec
Confidence 9999999999999975443321 135766667889999988 3578899988764 45444445689999999
Q ss_pred CCCCCCCCCCCCCChhhhHHHHHhhcCCCCCC------------------------CCCC------------CCCCcCCC
Q 012568 203 LLNPERYTGYTGPSARRIWDAVYTENCPKWMA------------------------IVPA------------NPQTRPNP 246 (460)
Q Consensus 203 l~NPERyTGY~G~~A~rIW~aIY~ENCF~~~~------------------------~~~C------------LHaSIsiH 246 (460)
++||||||||+|++|+|||++||+||||++.+ +++| |||||+||
T Consensus 179 l~NPEryTGY~G~~A~rIW~aIY~ENCF~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ClEkrvFyRLISGLHaSIs~H 258 (465)
T 3ahq_A 179 LLNPERYTGYKGPDAWKIWNVIYEENCFKPQTIKRPLNPLASGQGTSEENTFYSWLEGLCVEKRAFYRLISGLHASINVH 258 (465)
T ss_dssp GGSCCCCCCCCHHHHHHHHHHHHTTCCBCC---------------------------CCCBCCHHHHHHHHHHHHHHHHH
T ss_pred ccCcCcccCCCCCcHHHHHHHHHHHhccCccccccccCccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999997642 5788 99999999
Q ss_pred CCCC----C---CCCCCCChHHHHHHH------hhhchhhhhHHHHHHHHHHHHHHhhhhhhhhcc--CCCCccccHHHH
Q 012568 247 PAKT----R---PLRWGKNPELMYDRV------LRYQDRVRNLYFTFLFVLRAVTKATDYLEQAEY--DTGNHEDDLKTV 311 (460)
Q Consensus 247 l~~~----~---~~~w~pNl~~F~~Rv------~~~PeRl~NLYF~YllvLRAl~Ka~p~L~~~~f--~tG~~~eD~~t~ 311 (460)
||++ . +|.|+||+++|++|| |+|||||+||||+|+||||||+||+|||.++.| +||+..+|.+|+
T Consensus 259 l~~~Yl~~~~~~~~~W~pNl~~F~~R~~~~~t~G~~PeRl~NLYF~Y~lvLRAl~K~~p~l~~~~y~~~tGn~~eD~~tk 338 (465)
T 3ahq_A 259 LSARYLLQETWLEKKWGHNITEFQQRFDGILTEGEGPRRLKNLYFLYLIELRALSKVLPFFERPDFQLFTGNKIQDEENK 338 (465)
T ss_dssp HHHTEEEEECSSCEEEECCHHHHHHHHCHHHHTTHHHHHHHHHHHHHHHHHHHHHHTHHHHHSTTCCCCCSCSSHHHHHH
T ss_pred HHHHHhccccccCCCcCCCHHHHHHHhccccccCCChHHHHhHHHHHHHHHHHHHHhhhhhhhccccccCCChhhhHHHH
Confidence 9998 3 899999999999997 579999999999999999999999999997666 999999999999
Q ss_pred HHHHHHhcCccccccCCCCCccccccCCC--CcchHHHHHHHHhhhhhhhhcCccCCccccccchhhhHHHHHHHHhccc
Q 012568 312 SLMKQLLYNPKLQAACPLPFDEAKLWQGQ--SGPELKQQIQEQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSV 389 (460)
Q Consensus 312 ~lv~~Ll~~~~l~~scp~~FDE~~lF~~~--~~~~LKeefr~~FrNISrIMDCVgCeKCRLWGKLQt~GLgTALKILFs~ 389 (460)
++|.+|++.. .+||.+|||+.||++. .+.+||+|||+|||||||||||||||||||||||||+||||||||||+.
T Consensus 339 ~~l~~ll~~~---~s~p~~FDE~~lF~~~~~~~~~LKeeFr~~FrNISrIMDCVgCdKCRLWGKLQt~GlgTALKILF~~ 415 (465)
T 3ahq_A 339 MLLLEILHEI---KSFPLHFDENSFFAGDKKEAHKLKEDFRLHFRNISRIMDCVGCFKCRLWGKLQTQGLGTALKILFSE 415 (465)
T ss_dssp HHHHHHHHHH---HHSCEEECTTCTTSCCTHHHHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHH---HhCCCccChHhhcCCcchhHHHHHHHHHHHHHhHhHHhcCCccchhhhhhHHHHHHHHHHHHHHhcc
Confidence 9999999854 4799999999999984 6789999999999999999999999999999999999999999999997
Q ss_pred ccccc-----cccccccchhhHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 012568 390 EGQNH-----AAQSLQLQRNEVIALVNLLNRLSESVKIVHEMGPSIEK 432 (460)
Q Consensus 390 ~~~~~-----~~~~~~L~R~EiVALiNtf~RlS~SI~~v~~f~~~~e~ 432 (460)
++.++ ....++|+|+|||||||||+|||+||++|++|+.+++.
T Consensus 416 ~~~~~~~~~~~~~~~~L~R~ElVALiNtf~RlS~SI~~v~~F~~~~~~ 463 (465)
T 3ahq_A 416 KLIANMPESGPSYEFHLTRQEIVSLFNAFGRISTSVKELENFRNLLQN 463 (465)
T ss_dssp HHHHTCCSSSCCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred CcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 75321 12357899999999999999999999999999888753
No 2
>3m31_A Endoplasmic oxidoreductin-1; disulfide mutant, disulfide bond, electron transport, endopl reticulum, FAD, flavoprotein, glycoprotein; HET: FAD; 1.85A {Saccharomyces cerevisiae} SCOP: a.227.1.1 PDB: 1rp4_A* 1rq1_A* 3nvj_A*
Probab=100.00 E-value=2.3e-123 Score=946.84 Aligned_cols=348 Identities=28% Similarity=0.544 Sum_probs=287.7
Q ss_pred ccccccCcccchhhHHhhhhchhhHHhHHhhcCCcceeEeccCCCCCCCCCC-CCCCCCCCCccccCCC-CCCCCCCCCC
Q 012568 70 YTGMVEDCCCDYETVDSVNGEVLHPLLQQLVTTPFFRYFKAKLWCDCPFWPD-DGMCRLRDCSVCECPE-NEFPEPFKKP 147 (460)
Q Consensus 70 ~~g~vdDc~c~~etId~~N~~~l~P~L~~L~~t~fFRyfKVnL~~~CPFW~d-d~~C~~~~C~V~~c~e-~eiP~~wr~~ 147 (460)
-+|.|. |++|+|||++|.+ |+|+|++||++||||||||||+++||||+| +|+|++++|+|++|++ ++||++||++
T Consensus 8 ~~~~~~--~~~~~~i~~~N~~-i~p~L~~L~~tdfFryfKVnL~k~CPFW~d~~~~C~~~~CaV~~cd~~~~iP~~w~~~ 84 (388)
T 3m31_A 8 SSGLVP--RGSFNELNAINEN-IRDDLSALLKSDFFKYFRLDLYKQCSFWDANDGLCLNRACSVDVVEDWDTLPEYWQPE 84 (388)
T ss_dssp ---------CHHHHHHHHHHH-HHHHHHHHTTSTTTSEEEEESCCCCSSSCCSSCCCCTTTTBCC----CTTSCGGGSHH
T ss_pred cCCCCC--CCCHHHHHHHHHH-HHHHHHHHhcCCCceeeeecCCCCCCCCCCcCCCCCCCCCeeeeCCCcccCchhhccc
Confidence 467776 5699999999997 899999999999999999999999999998 8999999999999987 9999999975
Q ss_pred C-CCCCCC--------ccccccCCCCcccccccchhhhcCccccCCCCCCCCCCCCCCceEeeCCCCCCCCCCCCCCChh
Q 012568 148 F-HILPSD--------DLMCQEGKPEATVDRTLDKRAFRGWIETDNPWTNDDETDNGEMTYVNLLLNPERYTGYTGPSAR 218 (460)
Q Consensus 148 ~-~~~~~~--------~~~c~~~~~~~~vd~tl~~~~~~~w~~~d~~~~~dDe~d~~~~~YVDLl~NPERyTGY~G~~A~ 218 (460)
. +.++.+ +..|.....+..++..+ .+...++.||+.||+++++++||||++||||||||+|++|+
T Consensus 85 ~l~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~------~~~d~~~~~c~~dD~~~~~~~YVdLl~NPEryTGY~G~~a~ 158 (388)
T 3m31_A 85 ILGSFNNDTMKEADDSDDECKFLDQLAQTSKKP------VDIEDTINYCDVNDFNGKNAVLIDLTANPERFTGYGGKQAG 158 (388)
T ss_dssp HHTCCCTTTCEECCTTCGGGSBHHHHC-------------------CHHHHTTCCCTTEEEEETTTSCCCCCCBCHHHHH
T ss_pred cccCccccccccccccchhhhhhhhhccccccc------ccccCcCCeecccccCCCCceEeecccCCccccCCCCCchH
Confidence 4 223221 12232111111111111 01123456777666577899999999999999999999999
Q ss_pred hhHHHHHhhcCCCCCCCCCC------------CCCCcCCCCCCC----CCCCCCCChHHHHHHHhhhchhhhhHHHHHHH
Q 012568 219 RIWDAVYTENCPKWMAIVPA------------NPQTRPNPPAKT----RPLRWGKNPELMYDRVLRYQDRVRNLYFTFLF 282 (460)
Q Consensus 219 rIW~aIY~ENCF~~~~~~~C------------LHaSIsiHl~~~----~~~~w~pNl~~F~~Rv~~~PeRl~NLYF~Yll 282 (460)
+||++||+||||++..+++| |||||+||||++ .++.||||+++|++||++|||||+||||+|++
T Consensus 159 ~IW~aIY~ENCF~~~~~~~ClEkrvFyrLISGlHaSIs~Hl~~~yl~~~~~~w~pNl~~F~~R~g~~P~Rl~NLYF~Y~l 238 (388)
T 3m31_A 159 QIWSTIYQDNCFTIGETGESLAKDAFYRLVSGFHASIGTHLSKEYLNTKTGKWEPNLDLFMARIGNFPDRVTNMYFNYAV 238 (388)
T ss_dssp HHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHSEECTTTCCEECCHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCCcccccHHHHHHHHHhhhhHHHHHHHHHHHHhCccCCCcCCCHHHHHHHHccchhHHHHHHHHHHH
Confidence 99999999999998888889 999999999998 67999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhhhccCCCCccccHHHHHHHHHHhcCccccccCCCCCccccccCCCCcchHHHHHHHHhhhhhhhhcC
Q 012568 283 VLRAVTKATDYLEQAEYDTGNHEDDLKTVSLMKQLLYNPKLQAACPLPFDEAKLWQGQSGPELKQQIQEQFRNISALMDC 362 (460)
Q Consensus 283 vLRAl~Ka~p~L~~~~f~tG~~~eD~~t~~lv~~Ll~~~~l~~scp~~FDE~~lF~~~~~~~LKeefr~~FrNISrIMDC 362 (460)
+||||+||+|||.+++|+| .+|..|+++|.+|++. .+|.+|||+.||+++.+..||+|||+|||||||||||
T Consensus 239 ~lRAl~K~~p~l~~~~~~~---~~d~d~k~~~~~l~~~-----~~~~~FDE~~lF~~~~a~~LKeefr~~FrNISrIMDC 310 (388)
T 3m31_A 239 VAKALWKIQPYLPEFSFAD---LVNKEIKNKMDNVISQ-----LDTKIFNEDLVFANDLSLTLKDEFRSRFKNVTKIMDC 310 (388)
T ss_dssp HHHHHHHHGGGCCCSCSSC---HHHHHHHHHHHHHHHT-----TCCGGGGSCTTCTTTSCHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHhhccCCc---cccHHHHHHHHHHHHH-----hCcCCCCHHHhcCCCchHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999998 4688889999999864 3578999999999999999999999999999999999
Q ss_pred ccCCccccccchhhhHHHHHHHHhcccccccccccc---cccchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHh
Q 012568 363 VGCEKCRLWGKLQVLGLGTALKILFSVEGQNHAAQS---LQLQRNEVIALVNLLNRLSESVKIVHEMGPSIEKIM 434 (460)
Q Consensus 363 VgCeKCRLWGKLQt~GLgTALKILFs~~~~~~~~~~---~~L~R~EiVALiNtf~RlS~SI~~v~~f~~~~e~~~ 434 (460)
||||||||||||||+||||||||||+.++.+..... .+|+|+|||||||||+|||+||++|++|+.|+++-+
T Consensus 311 VgCeKCRLWGKLQt~GlgTALKILF~~~~~~~~~~~~~~~~L~R~EiVAL~Ntf~rlS~SI~~i~~F~~~~~~~~ 385 (388)
T 3m31_A 311 VQCDRCRLWGKIQTTGYATALKILFEINDADEFTKQHIVGKLTKYELIALLQTFGRLSESIESVNMFEKMYGKRL 385 (388)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcchheeehhhhHHHHHHHHHHHhcCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998765432112 389999999999999999999999999999887543
No 3
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=28.62 E-value=17 Score=23.47 Aligned_cols=11 Identities=45% Similarity=0.918 Sum_probs=9.3
Q ss_pred HHHHHHHHhcc
Q 012568 378 GLGTALKILFS 388 (460)
Q Consensus 378 GLgTALKILFs 388 (460)
|+|.|||+|-.
T Consensus 1 giGa~LKVLa~ 11 (26)
T 3qrx_B 1 GIGAVLKVLTT 11 (26)
T ss_pred CchHHHHHHHc
Confidence 78999999953
No 4
>1ash_A Hemoglobin (OXY); oxygen storage; HET: HEM; 2.15A {Ascaris suum} SCOP: a.1.1.2
Probab=23.61 E-value=79 Score=27.98 Aligned_cols=53 Identities=9% Similarity=0.195 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccccCCCcchhhHHHHHHHHhhh
Q 012568 406 VIALVNLLNRLSESVKIVHEMGPSIEKIMEKKISDPSALEFSKWRRMWKSVLA 458 (460)
Q Consensus 406 iVALiNtf~RlS~SI~~v~~f~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (460)
-+.|+|+++-+..+|.-.+.|...++++..+|+....--.+..+..+|..++.
T Consensus 66 ~~rl~~aL~~~i~~lDd~~~L~~~l~~L~~~H~~~g~gV~~e~f~~v~~~Ll~ 118 (150)
T 1ash_A 66 GQKILLACHVLCATYDDRETFNAYTRELLDRHARDHVHMPPEVWTDFWKLFEE 118 (150)
T ss_dssp HHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999876412344566666666543
No 5
>2wfu_A Probable insulin-like peptide 5 A chain; cleavage on PAIR of basic residues, signaling protein; 1.85A {Drosophila melanogaster}
Probab=23.57 E-value=16 Score=23.93 Aligned_cols=15 Identities=40% Similarity=1.336 Sum_probs=11.1
Q ss_pred ccccCcc---cchhhHHh
Q 012568 72 GMVEDCC---CDYETVDS 86 (460)
Q Consensus 72 g~vdDc~---c~~etId~ 86 (460)
|+||.|| |++..+.+
T Consensus 1 GIVdeCC~~~Cs~~~L~~ 18 (26)
T 2wfu_A 1 GVVDSCCRNSCSFSTLRA 18 (26)
T ss_dssp CHHHHHTSSCBCHHHHHH
T ss_pred CcchhhcCCcCCHHHHHH
Confidence 7889988 66766654
No 6
>1pid_A Despentapeptide insulin; hormone, glucose metabolism; 1.30A {Bos taurus} SCOP: g.1.1.1 PDB: 1bph_A 1aph_A 1dph_A 1cph_A 2a3g_A 2bn1_A 2ins_A 2zp6_A 4e7t_A 4e7u_A 4e7v_A 2bn3_A 2qiu_A 2r34_A 2r35_A 2r36_A 1a7f_A 1ai0_A* 1aiy_A* 1b17_A ...
Probab=23.26 E-value=16 Score=23.95 Aligned_cols=15 Identities=40% Similarity=1.214 Sum_probs=11.0
Q ss_pred ccccCcc---cchhhHHh
Q 012568 72 GMVEDCC---CDYETVDS 86 (460)
Q Consensus 72 g~vdDc~---c~~etId~ 86 (460)
|+||.|| |++..+++
T Consensus 1 GIVdeCC~~~Cs~~~L~~ 18 (26)
T 1pid_A 1 GIVEQCCASVCSLYQLEN 18 (26)
T ss_dssp CHHHHHTTSCCCHHHHHT
T ss_pred CcchhhCCCcCCHHHHHH
Confidence 7889988 66666654
No 7
>2k72_A Matrix metalloproteinase-23; toxin, metalloprotease, MMP23, potassium channel, cleavage on PAIR of basic residues, glycoprotein, hydrolase; NMR {Synthetic}
Probab=19.81 E-value=13 Score=25.43 Aligned_cols=18 Identities=22% Similarity=0.672 Sum_probs=15.0
Q ss_pred ccCCCCCCCCCCCCCCCC
Q 012568 110 AKLWCDCPFWPDDGMCRL 127 (460)
Q Consensus 110 VnL~~~CPFW~dd~~C~~ 127 (460)
+|....|+||...|.|..
T Consensus 4 ~D~~~~C~~Wa~~G~C~~ 21 (37)
T 2k72_A 4 LDRIFVCTSWARKGFCDV 21 (37)
T ss_dssp CCCCSCHHHHHTTTTTTT
T ss_pred cCcchhhHHHHhCCccCC
Confidence 466789999999999874
No 8
>2wfv_A Probable insulin-like peptide 5 A chain; signaling protein, cleavage on PAIR of basic residues; 1.85A {Drosophila melanogaster}
Probab=18.65 E-value=20 Score=23.40 Aligned_cols=16 Identities=38% Similarity=1.248 Sum_probs=11.7
Q ss_pred cccccCcc---cchhhHHh
Q 012568 71 TGMVEDCC---CDYETVDS 86 (460)
Q Consensus 71 ~g~vdDc~---c~~etId~ 86 (460)
.|+||.|| |++..+.+
T Consensus 3 rGIvdECC~~~Ct~~~L~~ 21 (26)
T 2wfv_A 3 RGVVDSCCRNSCSFSTLRA 21 (26)
T ss_dssp CHHHHHHTSSCBCHHHHHH
T ss_pred CcchhhhcCCcCCHHHHHH
Confidence 49999998 66666543
No 9
>4e29_A Chimeric WZZB chain length determinant protein; regulation of LPS O-antigen chain length, inner membran membrane protein; 1.60A {Shigella flexneri} PDB: 4e2c_A 4e2h_A 3b8p_A
Probab=15.74 E-value=1.5e+02 Score=28.50 Aligned_cols=40 Identities=18% Similarity=0.437 Sum_probs=28.5
Q ss_pred hhhHHHHHHHHhcccccccccccccccchhhHHHHHHHHHHHHHHHHHHHH
Q 012568 375 QVLGLGTALKILFSVEGQNHAAQSLQLQRNEVIALVNLLNRLSESVKIVHE 425 (460)
Q Consensus 375 Qt~GLgTALKILFs~~~~~~~~~~~~L~R~EiVALiNtf~RlS~SI~~v~~ 425 (460)
|+.+|-+||.|+|..+.. .. .+|- -..|+||+.++.+.-+
T Consensus 24 q~~~y~~a~~~~~~~~~~----~~-----~~~~--~~~~~~f~~~~~a~~~ 63 (248)
T 4e29_A 24 QIAGYNNAMNVIYGQAAP----KV-----SDLQ--ETLIGRFSSAFSALAE 63 (248)
T ss_dssp GGHHHHHHHHHHHGGGSC----CH-----HHHH--HHHHHHHHHHHHHHHH
T ss_pred hhccccchhhhcccCCCC----ch-----HHHH--HHHHHHHHHHHHHHHH
Confidence 888999999999987432 11 2332 4678899988877654
No 10
>2rng_A BIG defensin; alpha-helices & beta-sheets, three disulfide bridges, antibiotic, antimicrobial, fungicide, secreted; NMR {Tachypleus tridentatus} PDB: 2rq2_A
Probab=14.66 E-value=27 Score=28.31 Aligned_cols=55 Identities=20% Similarity=0.228 Sum_probs=33.0
Q ss_pred cCCcchHHHHHHHHHHHHhhhhhcccCCccccccCCCCcccccCCCCCCccccccccCcccchhhHHhhhhc
Q 012568 19 GLGRGLWSVWAVIVVLFATAAVTTRTGSKIALFANNQTSCHCSSSSQDSVKYTGMVEDCCCDYETVDSVNGE 90 (460)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~c~~~~~~~~~~~g~vdDc~c~~etId~~N~~ 90 (460)
++..|.|+|++.-+..++.+.++.. .+++.+|- .-.|--..-|++.|.+|..|+.
T Consensus 14 sp~V~~~Lv~~yGaaAVt~~~i~~~--------~~DshsCa---------nnrGWCR~~Cfs~Ey~D~~~s~ 68 (79)
T 2rng_A 14 GPSVWAYLVALVGAAAVTAANIRRA--------SSDNHSCA---------GNRGWCRSKCFRHEYVDTYYSA 68 (79)
T ss_dssp CHHHHHHHHHHSCHHHHHHTTEEEC--------SSSCCEET---------TTTEEEESSCCTTCEECTTTHH
T ss_pred CHHHHHHHHHHHhHHHHHHhheeec--------cCCccccc---------ccCCcccchhcceeeecccCCc
Confidence 3456888887665555555445444 23444443 1344445567788888888764
Done!