Query 012571
Match_columns 460
No_of_seqs 608 out of 3381
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 12:02:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012571.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012571hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hnr_A Probable methyltransfer 99.7 1.2E-15 4E-20 142.8 17.4 139 218-361 47-206 (220)
2 3dh0_A SAM dependent methyltra 99.7 9.7E-16 3.3E-20 143.3 16.1 147 198-353 27-178 (219)
3 4hg2_A Methyltransferase type 99.7 1E-16 3.5E-21 156.3 9.2 98 218-321 41-138 (257)
4 3h2b_A SAM-dependent methyltra 99.6 9.2E-16 3.2E-20 142.0 13.1 137 218-357 43-183 (203)
5 1pjz_A Thiopurine S-methyltran 99.6 6.3E-16 2.1E-20 144.6 11.0 98 218-318 24-140 (203)
6 4gek_A TRNA (CMO5U34)-methyltr 99.6 2.8E-15 9.5E-20 146.3 15.1 102 218-321 72-181 (261)
7 1vl5_A Unknown conserved prote 99.6 1.7E-15 5.7E-20 146.0 13.4 112 197-320 26-142 (260)
8 2p7i_A Hypothetical protein; p 99.6 3.2E-15 1.1E-19 141.4 14.6 100 218-322 44-145 (250)
9 3i9f_A Putative type 11 methyl 99.6 2E-15 7E-20 135.7 12.4 128 218-354 19-146 (170)
10 1xtp_A LMAJ004091AAA; SGPP, st 99.6 7.6E-16 2.6E-20 147.1 10.1 136 217-354 94-236 (254)
11 3bus_A REBM, methyltransferase 99.6 5.6E-15 1.9E-19 142.9 16.1 117 194-321 47-169 (273)
12 3l8d_A Methyltransferase; stru 99.6 6.7E-15 2.3E-19 139.5 16.0 133 218-354 55-198 (242)
13 3ujc_A Phosphoethanolamine N-m 99.6 5.1E-15 1.8E-19 141.9 14.9 135 218-354 57-204 (266)
14 2o57_A Putative sarcosine dime 99.6 8.2E-15 2.8E-19 143.8 16.7 148 194-354 64-232 (297)
15 3kkz_A Uncharacterized protein 99.6 1.4E-14 4.7E-19 140.2 16.8 131 217-353 47-193 (267)
16 3f4k_A Putative methyltransfer 99.6 1.5E-14 5E-19 138.6 16.4 99 218-320 48-152 (257)
17 3g5l_A Putative S-adenosylmeth 99.6 1.2E-14 4.1E-19 139.2 15.7 101 217-320 45-147 (253)
18 3ou2_A SAM-dependent methyltra 99.6 2.1E-14 7.2E-19 133.5 16.2 100 218-321 48-149 (218)
19 3ege_A Putative methyltransfer 99.6 5.5E-15 1.9E-19 143.0 12.7 114 194-321 20-133 (261)
20 1nkv_A Hypothetical protein YJ 99.6 6.5E-15 2.2E-19 140.9 13.0 116 194-321 22-143 (256)
21 3ccf_A Cyclopropane-fatty-acyl 99.6 1.6E-14 5.4E-19 140.8 15.0 111 198-321 47-157 (279)
22 3vc1_A Geranyl diphosphate 2-C 99.6 3E-14 1E-18 141.4 16.8 133 217-354 118-267 (312)
23 3dlc_A Putative S-adenosyl-L-m 99.6 2.1E-14 7.1E-19 133.2 14.6 101 218-321 45-151 (219)
24 1xxl_A YCGJ protein; structura 99.6 1.7E-14 5.9E-19 137.5 14.0 112 198-321 11-127 (239)
25 3dli_A Methyltransferase; PSI- 99.6 1.1E-14 3.7E-19 138.7 12.0 131 218-354 43-182 (240)
26 2yqz_A Hypothetical protein TT 99.6 2.5E-14 8.4E-19 137.1 14.2 97 217-317 40-140 (263)
27 4fsd_A Arsenic methyltransfera 99.6 1.8E-14 6.3E-19 147.6 14.1 135 217-352 84-247 (383)
28 3jwg_A HEN1, methyltransferase 99.6 3.7E-14 1.3E-18 132.8 14.9 116 195-319 16-142 (219)
29 3e23_A Uncharacterized protein 99.6 2.7E-14 9.2E-19 133.0 13.4 131 218-354 45-180 (211)
30 3dtn_A Putative methyltransfer 99.6 9.2E-15 3.1E-19 138.2 10.3 102 217-321 45-151 (234)
31 2gb4_A Thiopurine S-methyltran 99.6 2E-14 6.9E-19 139.5 12.8 98 218-318 70-191 (252)
32 3thr_A Glycine N-methyltransfe 99.6 1E-14 3.5E-19 142.7 10.7 115 194-320 43-177 (293)
33 4e2x_A TCAB9; kijanose, tetron 99.6 4.2E-15 1.4E-19 153.5 8.2 149 194-354 93-251 (416)
34 3ofk_A Nodulation protein S; N 99.6 3.4E-14 1.2E-18 132.6 13.6 98 218-320 53-156 (216)
35 3sm3_A SAM-dependent methyltra 99.5 7.8E-14 2.7E-18 130.9 16.0 101 218-322 32-145 (235)
36 4htf_A S-adenosylmethionine-de 99.5 4.2E-14 1.4E-18 138.1 14.3 99 218-320 70-175 (285)
37 3bkw_A MLL3908 protein, S-aden 99.5 4.2E-14 1.4E-18 133.9 13.8 100 218-320 45-146 (243)
38 2avn_A Ubiquinone/menaquinone 99.5 2.5E-14 8.7E-19 138.1 12.5 99 218-320 56-154 (260)
39 2p35_A Trans-aconitate 2-methy 99.5 2.1E-14 7E-19 137.5 11.7 101 218-321 35-135 (259)
40 3lcc_A Putative methyl chlorid 99.5 8.4E-14 2.9E-18 132.0 15.7 131 218-354 68-205 (235)
41 2gs9_A Hypothetical protein TT 99.5 5.2E-14 1.8E-18 130.9 14.0 98 218-321 38-135 (211)
42 3jwh_A HEN1; methyltransferase 99.5 4.6E-14 1.6E-18 132.2 13.6 116 195-319 16-142 (217)
43 1kpg_A CFA synthase;, cyclopro 99.5 3.5E-14 1.2E-18 138.6 13.2 99 218-321 66-171 (287)
44 2xvm_A Tellurite resistance pr 99.5 9.5E-14 3.2E-18 127.2 15.2 100 218-321 34-139 (199)
45 3gu3_A Methyltransferase; alph 99.5 4E-14 1.4E-18 138.7 13.5 102 217-320 23-128 (284)
46 3mgg_A Methyltransferase; NYSG 99.5 4.5E-14 1.5E-18 136.9 13.7 102 218-321 39-145 (276)
47 3e8s_A Putative SAM dependent 99.5 4.5E-14 1.5E-18 131.7 13.2 130 218-353 54-206 (227)
48 3pfg_A N-methyltransferase; N, 99.5 6E-14 2.1E-18 135.2 12.8 98 218-319 52-152 (263)
49 3g5t_A Trans-aconitate 3-methy 99.5 6.4E-14 2.2E-18 138.0 13.2 99 218-318 38-149 (299)
50 1vlm_A SAM-dependent methyltra 99.5 6.7E-14 2.3E-18 131.5 12.7 94 218-321 49-142 (219)
51 2ex4_A Adrenal gland protein A 99.5 5.6E-14 1.9E-18 133.8 11.8 136 217-354 80-223 (241)
52 2p8j_A S-adenosylmethionine-de 99.5 9.8E-14 3.3E-18 128.5 13.0 101 218-321 25-131 (209)
53 3hem_A Cyclopropane-fatty-acyl 99.5 1.3E-13 4.5E-18 135.9 13.8 114 196-322 60-187 (302)
54 3cgg_A SAM-dependent methyltra 99.5 5.8E-13 2E-17 121.0 16.7 123 218-353 48-172 (195)
55 1y8c_A S-adenosylmethionine-de 99.5 1.4E-13 4.9E-18 130.0 12.9 116 195-320 22-144 (246)
56 1ve3_A Hypothetical protein PH 99.5 1.8E-13 6E-18 128.2 13.4 100 218-320 40-144 (227)
57 2aot_A HMT, histamine N-methyl 99.5 3.9E-14 1.3E-18 139.3 8.9 102 217-320 53-174 (292)
58 1zx0_A Guanidinoacetate N-meth 99.5 6.4E-14 2.2E-18 133.3 9.9 115 193-319 46-171 (236)
59 3orh_A Guanidinoacetate N-meth 99.5 6.9E-14 2.4E-18 133.9 9.8 113 194-318 47-170 (236)
60 3m70_A Tellurite resistance pr 99.5 3.9E-13 1.3E-17 131.3 15.2 99 218-320 122-225 (286)
61 3ocj_A Putative exported prote 99.5 4E-13 1.4E-17 132.9 15.0 102 218-321 120-230 (305)
62 2pxx_A Uncharacterized protein 99.5 1.4E-13 4.8E-18 127.4 10.9 102 218-321 44-162 (215)
63 2fk8_A Methoxy mycolic acid sy 99.5 3.3E-13 1.1E-17 133.9 13.7 100 218-322 92-198 (318)
64 2kw5_A SLR1183 protein; struct 99.5 2.6E-13 9E-18 125.2 12.1 99 219-322 32-135 (202)
65 3mti_A RRNA methylase; SAM-dep 99.5 5.5E-13 1.9E-17 121.5 13.7 101 218-321 24-138 (185)
66 3bxo_A N,N-dimethyltransferase 99.5 4.2E-13 1.4E-17 126.6 13.3 100 218-321 42-144 (239)
67 3cc8_A Putative methyltransfer 99.5 1.8E-13 6.1E-18 127.9 10.6 99 217-321 33-133 (230)
68 3g2m_A PCZA361.24; SAM-depende 99.5 2.6E-13 8.9E-18 133.6 12.1 101 218-322 84-194 (299)
69 1dus_A MJ0882; hypothetical pr 99.5 2.3E-12 8E-17 116.8 17.3 114 195-320 39-159 (194)
70 2vdw_A Vaccinia virus capping 99.5 1.5E-13 5.2E-18 136.7 10.1 102 217-320 49-171 (302)
71 3bkx_A SAM-dependent methyltra 99.4 7.3E-13 2.5E-17 128.1 14.4 119 195-322 30-163 (275)
72 1wzn_A SAM-dependent methyltra 99.4 5.8E-13 2E-17 127.1 13.1 99 218-320 43-147 (252)
73 3iv6_A Putative Zn-dependent a 99.4 4.8E-13 1.6E-17 130.7 12.2 113 195-320 32-150 (261)
74 3e05_A Precorrin-6Y C5,15-meth 99.4 7.3E-12 2.5E-16 116.1 19.6 132 196-352 28-164 (204)
75 1ri5_A MRNA capping enzyme; me 99.4 7.3E-13 2.5E-17 129.1 12.8 101 218-320 66-176 (298)
76 3p9n_A Possible methyltransfer 99.4 1.3E-12 4.4E-17 119.9 13.2 103 218-322 46-157 (189)
77 2a14_A Indolethylamine N-methy 99.4 1.4E-13 4.9E-18 133.5 6.7 134 218-353 57-235 (263)
78 3m33_A Uncharacterized protein 99.4 2.9E-12 1E-16 121.1 15.2 115 218-355 50-166 (226)
79 3hm2_A Precorrin-6Y C5,15-meth 99.4 5.3E-12 1.8E-16 113.6 16.2 129 196-351 13-148 (178)
80 2g72_A Phenylethanolamine N-me 99.4 4.4E-13 1.5E-17 131.4 9.5 135 218-354 73-254 (289)
81 3d2l_A SAM-dependent methyltra 99.4 1.2E-12 4.2E-17 123.7 12.2 98 218-320 35-139 (243)
82 3njr_A Precorrin-6Y methylase; 99.4 1.1E-11 3.6E-16 116.0 18.4 128 196-352 43-176 (204)
83 1yzh_A TRNA (guanine-N(7)-)-me 99.4 7.7E-12 2.6E-16 117.1 16.8 123 218-354 43-180 (214)
84 1p91_A Ribosomal RNA large sub 99.4 1.2E-12 4.1E-17 126.5 11.2 95 218-321 87-181 (269)
85 2yxd_A Probable cobalt-precorr 99.4 1.7E-11 5.9E-16 110.2 17.9 138 194-362 21-163 (183)
86 3ggd_A SAM-dependent methyltra 99.4 1.3E-12 4.5E-17 124.3 10.6 101 218-321 58-166 (245)
87 3htx_A HEN1; HEN1, small RNA m 99.4 2.8E-12 9.6E-17 141.1 14.5 118 195-321 708-837 (950)
88 2i62_A Nicotinamide N-methyltr 99.4 9.4E-13 3.2E-17 126.1 9.2 136 217-354 57-237 (265)
89 2fca_A TRNA (guanine-N(7)-)-me 99.4 8.1E-12 2.8E-16 117.5 14.9 100 218-319 40-154 (213)
90 3q87_B N6 adenine specific DNA 99.4 6.3E-12 2.2E-16 114.0 13.6 116 218-355 25-148 (170)
91 3g07_A 7SK snRNA methylphospha 99.4 2.2E-12 7.4E-17 127.2 11.4 102 217-319 47-221 (292)
92 3fpf_A Mtnas, putative unchara 99.4 4.5E-12 1.6E-16 125.6 13.5 97 217-320 123-224 (298)
93 2r3s_A Uncharacterized protein 99.4 7.3E-12 2.5E-16 124.8 15.2 103 218-323 167-276 (335)
94 3eey_A Putative rRNA methylase 99.4 4.6E-12 1.6E-16 116.5 12.7 104 218-321 24-142 (197)
95 3bgv_A MRNA CAP guanine-N7 met 99.4 2E-12 7E-17 128.1 11.0 101 218-320 36-157 (313)
96 3evz_A Methyltransferase; NYSG 99.4 1E-11 3.5E-16 117.0 15.1 123 218-353 57-203 (230)
97 3mq2_A 16S rRNA methyltransfer 99.3 6.2E-12 2.1E-16 117.7 13.2 135 218-354 29-182 (218)
98 1l3i_A Precorrin-6Y methyltran 99.3 1.9E-11 6.4E-16 110.6 15.9 130 195-352 20-156 (192)
99 3grz_A L11 mtase, ribosomal pr 99.3 8.1E-12 2.8E-16 115.7 13.5 117 218-354 62-183 (205)
100 1xdz_A Methyltransferase GIDB; 99.3 7.1E-12 2.4E-16 119.6 13.5 120 217-352 71-198 (240)
101 2zfu_A Nucleomethylin, cerebra 99.3 1.8E-12 6.2E-17 120.9 8.8 109 218-354 69-177 (215)
102 3dxy_A TRNA (guanine-N(7)-)-me 99.3 4.4E-12 1.5E-16 120.2 11.1 100 218-319 36-151 (218)
103 1nt2_A Fibrillarin-like PRE-rR 99.3 6.2E-12 2.1E-16 118.4 11.6 96 218-319 59-162 (210)
104 3lbf_A Protein-L-isoaspartate 99.3 8.8E-12 3E-16 115.8 12.4 108 195-320 64-176 (210)
105 2ift_A Putative methylase HI07 99.3 4.3E-12 1.5E-16 118.2 10.0 101 218-322 55-167 (201)
106 3hp7_A Hemolysin, putative; st 99.3 1.3E-11 4.4E-16 122.3 13.8 129 218-352 87-228 (291)
107 2qe6_A Uncharacterized protein 99.3 1.6E-11 5.4E-16 120.4 14.3 104 217-321 78-199 (274)
108 3q7e_A Protein arginine N-meth 99.3 6.1E-12 2.1E-16 127.5 11.3 96 218-316 68-171 (349)
109 3i53_A O-methyltransferase; CO 99.3 3.8E-11 1.3E-15 120.1 16.7 102 217-322 170-278 (332)
110 3uwp_A Histone-lysine N-methyl 99.3 5.7E-12 2E-16 129.8 10.8 124 188-322 152-292 (438)
111 3dmg_A Probable ribosomal RNA 99.3 4.1E-12 1.4E-16 130.5 9.6 100 218-320 235-342 (381)
112 3ckk_A TRNA (guanine-N(7)-)-me 99.3 1.5E-11 5E-16 117.9 12.7 100 218-319 48-169 (235)
113 3p2e_A 16S rRNA methylase; met 99.3 1.7E-11 5.9E-16 116.6 12.9 134 218-354 26-183 (225)
114 1af7_A Chemotaxis receptor met 99.3 1.7E-11 6E-16 120.4 13.2 101 218-318 107-252 (274)
115 3gwz_A MMCR; methyltransferase 99.3 5.6E-11 1.9E-15 121.0 17.4 103 217-323 203-312 (369)
116 1fbn_A MJ fibrillarin homologu 99.3 2.4E-11 8.3E-16 115.2 13.6 125 218-353 76-210 (230)
117 3dp7_A SAM-dependent methyltra 99.3 1.6E-11 5.4E-16 124.8 13.1 104 217-323 180-292 (363)
118 1vbf_A 231AA long hypothetical 99.3 1.4E-11 4.8E-16 116.1 11.8 109 195-321 57-168 (231)
119 2pwy_A TRNA (adenine-N(1)-)-me 99.3 3.7E-11 1.3E-15 114.8 14.7 129 198-352 86-220 (258)
120 2fyt_A Protein arginine N-meth 99.3 1.1E-11 3.7E-16 125.2 11.5 95 218-315 66-168 (340)
121 3fzg_A 16S rRNA methylase; met 99.3 7.7E-12 2.6E-16 116.3 9.2 113 193-318 36-152 (200)
122 3g89_A Ribosomal RNA small sub 99.3 2.2E-11 7.6E-16 117.7 12.7 121 217-353 81-209 (249)
123 2fhp_A Methylase, putative; al 99.3 2.1E-11 7.2E-16 110.5 11.6 117 193-321 28-157 (187)
124 2fpo_A Methylase YHHF; structu 99.3 2.1E-11 7.2E-16 113.6 11.5 100 218-321 56-163 (202)
125 3r0q_C Probable protein argini 99.3 1.1E-11 3.8E-16 126.8 10.5 98 218-319 65-170 (376)
126 2frn_A Hypothetical protein PH 99.3 3.5E-11 1.2E-15 117.9 13.5 121 218-352 127-253 (278)
127 1i9g_A Hypothetical protein RV 99.3 4.9E-11 1.7E-15 115.7 14.1 110 197-320 88-205 (280)
128 4df3_A Fibrillarin-like rRNA/T 99.3 1.2E-11 4.1E-16 118.7 9.5 101 217-320 78-184 (233)
129 3lpm_A Putative methyltransfer 99.3 5.2E-11 1.8E-15 115.0 14.1 120 218-352 51-197 (259)
130 2esr_A Methyltransferase; stru 99.3 1.2E-11 4.1E-16 111.8 8.9 114 196-321 18-141 (177)
131 3mcz_A O-methyltransferase; ad 99.2 2.6E-11 8.8E-16 122.0 12.0 105 217-323 180-292 (352)
132 1dl5_A Protein-L-isoaspartate 99.2 3.1E-11 1E-15 120.4 12.2 111 195-320 62-177 (317)
133 3lst_A CALO1 methyltransferase 99.2 1.2E-10 4.2E-15 117.3 16.6 100 218-322 186-290 (348)
134 4dzr_A Protein-(glutamine-N5) 99.2 7.6E-12 2.6E-16 115.5 7.1 115 195-319 16-165 (215)
135 1yb2_A Hypothetical protein TA 99.2 3.9E-11 1.3E-15 117.0 12.4 116 218-352 112-233 (275)
136 3mb5_A SAM-dependent methyltra 99.2 6.3E-11 2.2E-15 113.4 13.5 107 198-320 83-196 (255)
137 1g6q_1 HnRNP arginine N-methyl 99.2 3.9E-11 1.3E-15 120.5 12.4 111 195-316 25-143 (328)
138 1ws6_A Methyltransferase; stru 99.2 1.2E-11 4E-16 110.4 7.7 114 194-321 25-150 (171)
139 1tw3_A COMT, carminomycin 4-O- 99.2 1.1E-10 3.6E-15 117.9 15.6 99 218-320 185-290 (360)
140 1jsx_A Glucose-inhibited divis 99.2 4.4E-11 1.5E-15 110.6 11.6 95 218-319 67-166 (207)
141 1qzz_A RDMB, aclacinomycin-10- 99.2 4.7E-11 1.6E-15 121.0 12.8 99 217-319 183-288 (374)
142 2ip2_A Probable phenazine-spec 99.2 6.6E-11 2.3E-15 118.1 13.5 101 218-322 169-276 (334)
143 3reo_A (ISO)eugenol O-methyltr 99.2 5.1E-11 1.7E-15 121.4 12.8 100 217-322 204-304 (368)
144 2yxe_A Protein-L-isoaspartate 99.2 5.2E-11 1.8E-15 110.9 11.8 112 195-321 64-180 (215)
145 2pjd_A Ribosomal RNA small sub 99.2 1.7E-11 5.9E-16 123.6 8.9 115 195-320 183-305 (343)
146 2y1w_A Histone-arginine methyl 99.2 3.9E-11 1.3E-15 121.4 11.5 113 194-318 36-155 (348)
147 1x19_A CRTF-related protein; m 99.2 8.5E-11 2.9E-15 118.8 13.8 100 218-321 192-298 (359)
148 3p9c_A Caffeic acid O-methyltr 99.2 1.3E-10 4.5E-15 118.2 15.3 100 217-322 202-302 (364)
149 3id6_C Fibrillarin-like rRNA/T 99.2 1.3E-10 4.4E-15 111.5 13.7 131 217-354 77-214 (232)
150 2ld4_A Anamorsin; methyltransf 99.2 1.4E-11 4.6E-16 111.6 6.4 111 218-348 14-128 (176)
151 2nxc_A L11 mtase, ribosomal pr 99.2 8.2E-11 2.8E-15 113.7 12.2 117 218-354 122-242 (254)
152 3u81_A Catechol O-methyltransf 99.2 4.5E-11 1.6E-15 112.5 9.9 101 218-320 60-172 (221)
153 2ipx_A RRNA 2'-O-methyltransfe 99.2 5.1E-11 1.8E-15 112.9 10.3 98 218-319 79-183 (233)
154 1ej0_A FTSJ; methyltransferase 99.2 2.9E-11 9.8E-16 107.5 8.0 97 218-321 24-139 (180)
155 1i1n_A Protein-L-isoaspartate 99.2 1.3E-10 4.4E-15 109.2 12.8 97 218-321 79-185 (226)
156 1fp1_D Isoliquiritigenin 2'-O- 99.2 4.2E-11 1.4E-15 121.9 10.2 98 217-321 210-309 (372)
157 2ozv_A Hypothetical protein AT 99.2 1E-10 3.5E-15 113.4 12.4 101 218-319 38-171 (260)
158 3sso_A Methyltransferase; macr 99.2 9.1E-12 3.1E-16 128.0 4.9 98 217-320 217-326 (419)
159 2vdv_E TRNA (guanine-N(7)-)-me 99.2 8.5E-11 2.9E-15 112.6 11.4 100 218-319 51-174 (246)
160 1o54_A SAM-dependent O-methylt 99.2 2.3E-10 8E-15 111.4 14.7 116 218-352 114-235 (277)
161 1ixk_A Methyltransferase; open 99.2 2.5E-10 8.6E-15 114.0 15.1 136 199-351 109-270 (315)
162 3gdh_A Trimethylguanosine synt 99.2 3.5E-12 1.2E-16 121.2 1.5 96 218-318 80-181 (241)
163 2bm8_A Cephalosporin hydroxyla 99.2 2.8E-11 9.4E-16 116.0 7.7 98 218-319 83-188 (236)
164 3opn_A Putative hemolysin; str 99.2 5.7E-11 1.9E-15 113.8 9.8 130 218-353 39-181 (232)
165 3bzb_A Uncharacterized protein 99.2 2.6E-10 9E-15 111.8 14.8 99 218-319 81-206 (281)
166 3tfw_A Putative O-methyltransf 99.2 1.3E-10 4.5E-15 111.7 12.2 100 218-321 65-173 (248)
167 2b3t_A Protein methyltransfera 99.2 1.8E-10 6.3E-15 112.2 13.2 118 218-350 111-257 (276)
168 3dr5_A Putative O-methyltransf 99.2 7.8E-11 2.7E-15 111.8 10.1 99 218-320 58-165 (221)
169 1g8a_A Fibrillarin-like PRE-rR 99.2 2.3E-10 7.9E-15 107.7 13.1 98 218-318 75-178 (227)
170 3ntv_A MW1564 protein; rossman 99.2 1.1E-10 3.8E-15 111.0 10.8 98 218-320 73-178 (232)
171 2pbf_A Protein-L-isoaspartate 99.2 1.5E-10 5E-15 108.9 11.4 96 218-320 82-195 (227)
172 1jg1_A PIMT;, protein-L-isoasp 99.2 1.4E-10 4.8E-15 110.1 11.3 109 195-321 78-192 (235)
173 4dcm_A Ribosomal RNA large sub 99.2 1.4E-10 4.9E-15 118.7 12.2 114 196-319 210-335 (375)
174 1u2z_A Histone-lysine N-methyl 99.2 1.5E-10 5.2E-15 120.5 12.5 116 195-321 229-362 (433)
175 1o9g_A RRNA methyltransferase; 99.1 1.4E-10 4.9E-15 111.1 11.3 102 218-320 53-216 (250)
176 1fp2_A Isoflavone O-methyltran 99.1 8.9E-11 3E-15 118.5 10.1 98 217-321 189-291 (352)
177 3bwc_A Spermidine synthase; SA 99.1 3E-10 1E-14 112.9 13.7 125 217-351 96-235 (304)
178 2yvl_A TRMI protein, hypotheti 99.1 2.6E-10 8.8E-15 108.3 12.6 105 199-320 82-192 (248)
179 2b25_A Hypothetical protein; s 99.1 1.1E-10 3.8E-15 117.1 9.7 109 197-319 94-220 (336)
180 3c3p_A Methyltransferase; NP_9 99.1 1.7E-10 5.9E-15 107.4 9.9 97 218-319 58-161 (210)
181 3duw_A OMT, O-methyltransferas 99.1 2.4E-10 8.2E-15 107.1 10.8 100 218-321 60-170 (223)
182 2gpy_A O-methyltransferase; st 99.1 2.1E-10 7E-15 108.6 10.4 98 218-320 56-162 (233)
183 3giw_A Protein of unknown func 99.1 1.4E-10 4.8E-15 113.8 9.1 121 194-321 63-203 (277)
184 3tr6_A O-methyltransferase; ce 99.1 1.3E-10 4.5E-15 108.9 8.6 100 218-321 66-177 (225)
185 4a6d_A Hydroxyindole O-methylt 99.1 1.8E-09 6.2E-14 109.3 17.6 132 217-352 180-330 (353)
186 2igt_A SAM dependent methyltra 99.1 4.9E-10 1.7E-14 112.9 13.2 101 218-321 155-275 (332)
187 3tma_A Methyltransferase; thum 99.1 2.9E-10 9.9E-15 115.0 11.5 115 196-319 191-318 (354)
188 2plw_A Ribosomal RNA methyltra 99.1 2.4E-10 8.2E-15 105.1 9.9 95 218-319 24-155 (201)
189 3a27_A TYW2, uncharacterized p 99.1 1.1E-09 3.7E-14 107.0 14.9 120 218-350 121-245 (272)
190 1r18_A Protein-L-isoaspartate( 99.1 3.6E-10 1.2E-14 106.6 11.0 95 218-320 86-196 (227)
191 3b3j_A Histone-arginine methyl 99.1 2.9E-10 9.8E-15 120.1 10.4 96 218-317 160-262 (480)
192 4azs_A Methyltransferase WBDD; 99.1 1.3E-10 4.3E-15 125.3 7.4 100 218-321 68-176 (569)
193 2oxt_A Nucleoside-2'-O-methylt 99.1 1.2E-10 4.2E-15 113.7 6.1 94 218-320 76-187 (265)
194 2wa2_A Non-structural protein 99.0 8.9E-11 3E-15 115.4 4.9 94 218-320 84-195 (276)
195 1ne2_A Hypothetical protein TA 99.0 5.4E-09 1.8E-13 96.3 16.7 93 218-317 53-146 (200)
196 2hnk_A SAM-dependent O-methylt 99.0 7.2E-10 2.5E-14 105.5 10.4 98 218-319 62-182 (239)
197 4hc4_A Protein arginine N-meth 99.0 6.6E-10 2.3E-14 113.8 10.4 95 218-316 85-187 (376)
198 2yxl_A PH0851 protein, 450AA l 99.0 3E-09 1E-13 111.3 15.7 104 218-321 261-392 (450)
199 3adn_A Spermidine synthase; am 99.0 9.2E-10 3.1E-14 109.1 11.1 101 217-319 84-199 (294)
200 3r3h_A O-methyltransferase, SA 99.0 9.7E-11 3.3E-15 112.6 3.9 100 218-321 62-173 (242)
201 1zg3_A Isoflavanone 4'-O-methy 99.0 4.8E-10 1.7E-14 113.3 9.2 98 217-321 194-296 (358)
202 3cbg_A O-methyltransferase; cy 99.0 1E-09 3.5E-14 104.3 10.6 99 218-320 74-184 (232)
203 1sui_A Caffeoyl-COA O-methyltr 99.0 5.8E-10 2E-14 107.4 8.9 98 218-319 81-191 (247)
204 1xj5_A Spermidine synthase 1; 99.0 1.7E-09 5.9E-14 109.1 12.3 101 217-319 121-236 (334)
205 3gjy_A Spermidine synthase; AP 99.0 1.5E-09 5.1E-14 108.7 11.3 100 218-319 91-201 (317)
206 3ajd_A Putative methyltransfer 99.0 1.8E-09 6E-14 105.5 11.6 105 218-322 85-215 (274)
207 2avd_A Catechol-O-methyltransf 99.0 1E-09 3.4E-14 103.2 9.0 99 218-320 71-181 (229)
208 2qm3_A Predicted methyltransfe 99.0 7.8E-09 2.7E-13 105.4 16.1 123 218-352 174-305 (373)
209 2nyu_A Putative ribosomal RNA 99.0 7.6E-10 2.6E-14 101.2 7.6 97 218-320 24-147 (196)
210 3m6w_A RRNA methylase; rRNA me 99.0 2.1E-09 7E-14 113.0 11.8 104 218-321 103-232 (464)
211 1zq9_A Probable dimethyladenos 99.0 1.3E-09 4.4E-14 107.3 9.6 107 194-314 14-143 (285)
212 1wy7_A Hypothetical protein PH 99.0 3.6E-08 1.2E-12 91.0 18.9 117 218-353 51-172 (207)
213 1nv8_A HEMK protein; class I a 99.0 2.2E-09 7.6E-14 105.6 11.2 114 194-319 109-250 (284)
214 2i7c_A Spermidine synthase; tr 99.0 2.7E-09 9.4E-14 104.8 11.2 102 217-320 79-194 (283)
215 2o07_A Spermidine synthase; st 98.9 2.2E-09 7.5E-14 106.8 10.5 101 217-319 96-210 (304)
216 3c3y_A Pfomt, O-methyltransfer 98.9 2E-09 6.8E-14 102.8 9.6 98 218-319 72-182 (237)
217 2pt6_A Spermidine synthase; tr 98.9 2.8E-09 9.4E-14 106.9 11.0 100 218-319 118-231 (321)
218 1inl_A Spermidine synthase; be 98.9 7.3E-09 2.5E-13 102.5 13.8 100 218-319 92-206 (296)
219 3lec_A NADB-rossmann superfami 98.9 1.1E-08 3.7E-13 97.9 14.5 119 218-354 23-147 (230)
220 2cmg_A Spermidine synthase; tr 98.9 3E-09 1E-13 103.7 10.7 91 217-319 73-172 (262)
221 1uir_A Polyamine aminopropyltr 98.9 2.2E-09 7.6E-14 107.1 9.9 101 217-319 78-196 (314)
222 1iy9_A Spermidine synthase; ro 98.9 7.4E-09 2.5E-13 101.4 13.4 101 217-319 76-190 (275)
223 3tm4_A TRNA (guanine N2-)-meth 98.9 1E-08 3.4E-13 104.7 14.6 118 218-353 219-349 (373)
224 2b2c_A Spermidine synthase; be 98.9 2E-09 6.7E-14 107.7 9.0 101 217-319 109-223 (314)
225 2b78_A Hypothetical protein SM 98.9 5.2E-09 1.8E-13 107.4 11.4 123 218-349 214-355 (385)
226 2h00_A Methyltransferase 10 do 98.9 1.4E-09 4.7E-14 104.2 6.7 101 217-318 66-192 (254)
227 1mjf_A Spermidine synthase; sp 98.9 4E-09 1.4E-13 103.6 9.9 98 218-319 77-194 (281)
228 3gnl_A Uncharacterized protein 98.9 1.8E-08 6.2E-13 97.1 14.1 119 218-354 23-147 (244)
229 1sqg_A SUN protein, FMU protei 98.9 5E-09 1.7E-13 108.9 11.0 115 198-321 236-377 (429)
230 2p41_A Type II methyltransfera 98.9 1.1E-09 3.9E-14 109.0 5.4 97 218-320 84-193 (305)
231 3dou_A Ribosomal RNA large sub 98.9 4.2E-09 1.4E-13 97.6 8.5 93 218-319 27-140 (191)
232 4dmg_A Putative uncharacterize 98.9 1.6E-08 5.3E-13 104.2 13.1 101 218-321 216-329 (393)
233 3kr9_A SAM-dependent methyltra 98.9 3E-08 1E-12 94.5 14.2 118 218-354 17-141 (225)
234 3c0k_A UPF0064 protein YCCW; P 98.8 2.2E-08 7.5E-13 102.9 14.0 102 218-321 222-342 (396)
235 3m4x_A NOL1/NOP2/SUN family pr 98.8 1.2E-08 4.1E-13 107.0 12.2 136 200-352 97-259 (456)
236 3k6r_A Putative transferase PH 98.8 2.4E-08 8.2E-13 98.2 13.2 122 218-353 127-254 (278)
237 2frx_A Hypothetical protein YE 98.8 2.1E-08 7.1E-13 105.9 13.6 105 218-322 119-250 (479)
238 2h1r_A Dimethyladenosine trans 98.8 1.6E-08 5.3E-13 100.3 11.1 87 194-294 28-119 (299)
239 2f8l_A Hypothetical protein LM 98.8 2.1E-08 7.3E-13 100.9 11.9 103 218-321 132-259 (344)
240 3lcv_B Sisomicin-gentamicin re 98.8 2.2E-08 7.5E-13 97.2 11.3 100 217-319 133-237 (281)
241 3v97_A Ribosomal RNA large sub 98.8 1.3E-08 4.5E-13 112.1 10.9 102 218-321 541-660 (703)
242 2as0_A Hypothetical protein PH 98.8 1.9E-08 6.4E-13 103.3 11.3 102 218-321 219-338 (396)
243 3frh_A 16S rRNA methylase; met 98.8 1.2E-08 4E-13 98.1 9.0 97 217-318 106-206 (253)
244 1wxx_A TT1595, hypothetical pr 98.8 2.8E-08 9.5E-13 101.7 11.5 101 218-321 211-328 (382)
245 1qam_A ERMC' methyltransferase 98.7 3.6E-08 1.2E-12 94.7 10.4 82 194-287 16-101 (244)
246 1yub_A Ermam, rRNA methyltrans 98.7 1E-09 3.4E-14 105.3 -1.5 113 195-320 16-147 (245)
247 2xyq_A Putative 2'-O-methyl tr 98.7 8.5E-08 2.9E-12 94.8 11.7 91 218-320 65-173 (290)
248 2ih2_A Modification methylase 98.7 2.8E-08 9.7E-13 101.9 8.1 114 194-320 25-166 (421)
249 2jjq_A Uncharacterized RNA met 98.7 2E-07 6.7E-12 97.0 14.3 93 218-319 292-388 (425)
250 2yx1_A Hypothetical protein MJ 98.6 1.4E-07 4.9E-12 94.8 12.1 92 218-321 197-294 (336)
251 1uwv_A 23S rRNA (uracil-5-)-me 98.6 2.2E-07 7.5E-12 96.7 13.5 109 195-319 273-390 (433)
252 3gru_A Dimethyladenosine trans 98.6 7.8E-08 2.7E-12 95.3 8.5 88 194-293 36-126 (295)
253 2okc_A Type I restriction enzy 98.6 1.4E-07 4.8E-12 98.4 10.4 124 187-320 151-309 (445)
254 3tqs_A Ribosomal RNA small sub 98.5 4E-07 1.4E-11 88.3 10.1 82 194-287 15-103 (255)
255 2qfm_A Spermine synthase; sper 98.4 3.4E-07 1.2E-11 92.9 8.4 103 216-320 188-316 (364)
256 3ldu_A Putative methylase; str 98.4 1.1E-06 3.6E-11 90.2 11.8 102 218-320 197-346 (385)
257 3k0b_A Predicted N6-adenine-sp 98.4 1.4E-06 4.7E-11 89.6 12.5 102 218-320 203-352 (393)
258 3ldg_A Putative uncharacterize 98.4 2.1E-06 7.1E-11 88.1 13.4 102 218-320 196-345 (384)
259 3bt7_A TRNA (uracil-5-)-methyl 98.4 6.3E-07 2.1E-11 91.2 8.8 93 218-320 215-328 (369)
260 3fut_A Dimethyladenosine trans 98.4 1.3E-06 4.5E-11 85.4 10.6 88 193-293 32-122 (271)
261 2b9e_A NOL1/NOP2/SUN domain fa 98.4 3E-06 1E-10 84.4 12.9 103 218-321 104-237 (309)
262 3evf_A RNA-directed RNA polyme 98.3 6.3E-07 2.1E-11 87.4 7.2 101 218-320 76-186 (277)
263 3uzu_A Ribosomal RNA small sub 98.3 1.3E-06 4.4E-11 85.8 8.4 77 194-278 28-106 (279)
264 4gqb_A Protein arginine N-meth 98.2 3.7E-06 1.3E-10 91.2 11.0 119 195-315 336-464 (637)
265 3ftd_A Dimethyladenosine trans 98.2 6.9E-06 2.4E-10 79.1 11.4 75 194-278 17-92 (249)
266 3axs_A Probable N(2),N(2)-dime 98.2 5.9E-06 2E-10 84.9 10.9 97 218-319 54-159 (392)
267 3b5i_A S-adenosyl-L-methionine 98.2 3.7E-06 1.3E-10 85.8 9.1 106 217-323 53-230 (374)
268 1qyr_A KSGA, high level kasuga 98.2 3.4E-06 1.2E-10 81.5 7.9 84 194-288 7-98 (252)
269 2efj_A 3,7-dimethylxanthine me 98.1 9.1E-06 3.1E-10 83.2 11.1 106 217-323 53-230 (384)
270 1m6y_A S-adenosyl-methyltransf 98.1 2.9E-06 9.9E-11 84.2 7.0 86 194-288 12-106 (301)
271 2ar0_A M.ecoki, type I restric 98.1 4.7E-06 1.6E-10 89.2 9.0 125 187-320 149-314 (541)
272 2dul_A N(2),N(2)-dimethylguano 98.1 4.1E-06 1.4E-10 85.7 7.2 95 218-318 49-164 (378)
273 3v97_A Ribosomal RNA large sub 98.1 1.5E-05 5.2E-10 87.7 11.8 118 196-321 178-350 (703)
274 2r6z_A UPF0341 protein in RSP 98.0 8.1E-06 2.8E-10 79.1 7.1 68 218-288 85-169 (258)
275 3lkd_A Type I restriction-modi 98.0 6.3E-05 2.1E-09 80.4 13.7 130 187-321 197-361 (542)
276 3khk_A Type I restriction-modi 97.9 3.9E-05 1.3E-09 82.0 11.7 117 195-320 232-397 (544)
277 3o4f_A Spermidine synthase; am 97.9 6.2E-05 2.1E-09 74.3 11.9 102 217-320 84-200 (294)
278 1m6e_X S-adenosyl-L-methionnin 97.9 1.1E-05 3.6E-10 82.0 6.5 106 217-323 52-214 (359)
279 3gcz_A Polyprotein; flavivirus 97.9 9.5E-06 3.2E-10 79.2 4.6 101 218-320 92-203 (282)
280 3ua3_A Protein arginine N-meth 97.8 2.5E-05 8.4E-10 85.1 7.7 98 218-315 411-531 (745)
281 3cvo_A Methyltransferase-like 97.8 0.00023 7.9E-09 66.5 12.4 91 218-318 32-154 (202)
282 3ll7_A Putative methyltransfer 97.7 2.5E-05 8.4E-10 80.7 4.9 67 218-287 95-170 (410)
283 2qy6_A UPF0209 protein YFCK; s 97.7 4.6E-05 1.6E-09 73.8 6.3 119 217-352 61-231 (257)
284 4auk_A Ribosomal RNA large sub 97.6 0.00052 1.8E-08 69.7 13.3 92 217-318 212-306 (375)
285 3s1s_A Restriction endonucleas 97.6 0.00027 9.2E-09 78.2 11.2 103 218-320 323-467 (878)
286 2oyr_A UPF0341 protein YHIQ; a 97.6 5.8E-05 2E-09 73.2 5.2 90 218-312 90-194 (258)
287 3eld_A Methyltransferase; flav 97.5 0.00032 1.1E-08 68.9 9.0 102 217-320 82-193 (300)
288 3c6k_A Spermine synthase; sper 97.4 0.00046 1.6E-08 70.3 9.0 101 217-319 206-332 (381)
289 2k4m_A TR8_protein, UPF0146 pr 97.2 0.00048 1.6E-08 61.0 5.8 82 218-319 37-122 (153)
290 4fzv_A Putative methyltransfer 97.1 0.0029 9.9E-08 64.1 12.2 115 200-323 140-289 (359)
291 3lkz_A Non-structural protein 96.9 0.0077 2.6E-07 59.1 12.3 99 218-321 96-207 (321)
292 1wg8_A Predicted S-adenosylmet 96.8 0.0039 1.3E-07 61.0 8.9 83 194-287 8-96 (285)
293 2px2_A Genome polyprotein [con 96.8 0.0022 7.4E-08 61.8 6.8 112 196-320 61-185 (269)
294 2wk1_A NOVP; transferase, O-me 96.7 0.012 4.2E-07 57.5 12.2 133 218-363 108-281 (282)
295 2zig_A TTHA0409, putative modi 96.7 0.0034 1.2E-07 61.5 7.9 54 195-260 223-276 (297)
296 3p8z_A Mtase, non-structural p 96.6 0.042 1.4E-06 52.3 14.5 98 218-321 80-189 (267)
297 3ufb_A Type I restriction-modi 96.5 0.022 7.6E-07 60.5 13.4 126 186-320 196-364 (530)
298 2vz8_A Fatty acid synthase; tr 96.5 0.00076 2.6E-08 83.7 2.1 102 217-319 1241-1349(2512)
299 1g55_A DNA cytosine methyltran 94.7 0.14 4.7E-06 51.2 10.3 127 218-353 3-146 (343)
300 1g60_A Adenine-specific methyl 94.6 0.08 2.7E-06 50.6 7.9 54 195-260 200-253 (260)
301 1f8f_A Benzyl alcohol dehydrog 94.4 0.099 3.4E-06 52.3 8.4 93 218-320 192-291 (371)
302 1pl8_A Human sorbitol dehydrog 93.9 0.24 8.1E-06 49.2 10.1 93 218-319 173-274 (356)
303 3g7u_A Cytosine-specific methy 93.8 0.8 2.7E-05 46.3 13.9 124 218-350 3-145 (376)
304 3r24_A NSP16, 2'-O-methyl tran 93.6 0.096 3.3E-06 51.4 6.3 94 217-321 110-220 (344)
305 2dph_A Formaldehyde dismutase; 93.6 0.16 5.4E-06 51.4 8.2 98 218-319 187-300 (398)
306 1i4w_A Mitochondrial replicati 93.5 0.21 7.3E-06 50.2 8.9 77 194-273 38-116 (353)
307 1pqw_A Polyketide synthase; ro 93.4 0.11 3.8E-06 46.8 6.0 90 218-319 40-138 (198)
308 3tka_A Ribosomal RNA small sub 93.2 0.097 3.3E-06 52.4 5.7 86 194-288 43-136 (347)
309 1e3j_A NADP(H)-dependent ketos 92.9 0.57 2E-05 46.3 11.0 93 218-319 170-272 (352)
310 3vyw_A MNMC2; tRNA wobble urid 92.6 0.37 1.3E-05 47.5 8.8 119 217-353 97-245 (308)
311 3qv2_A 5-cytosine DNA methyltr 92.2 0.79 2.7E-05 45.5 10.8 128 218-353 11-157 (327)
312 1v3u_A Leukotriene B4 12- hydr 92.1 0.29 1E-05 47.9 7.5 92 218-319 147-245 (333)
313 4ej6_A Putative zinc-binding d 92.0 0.45 1.5E-05 47.6 8.9 94 218-320 184-286 (370)
314 3two_A Mannitol dehydrogenase; 92.0 0.41 1.4E-05 47.3 8.5 89 218-320 178-267 (348)
315 1kol_A Formaldehyde dehydrogen 91.4 0.48 1.6E-05 47.7 8.4 97 218-319 187-301 (398)
316 3fpc_A NADP-dependent alcohol 91.4 0.34 1.2E-05 47.9 7.2 93 218-320 168-268 (352)
317 3s2e_A Zinc-containing alcohol 91.2 0.6 2.1E-05 45.8 8.7 93 218-320 168-265 (340)
318 4h0n_A DNMT2; SAH binding, tra 90.9 1.2 4.1E-05 44.2 10.6 127 218-353 4-146 (333)
319 3uog_A Alcohol dehydrogenase; 90.9 0.27 9.3E-06 49.0 5.9 93 218-321 191-290 (363)
320 1uuf_A YAHK, zinc-type alcohol 90.7 0.38 1.3E-05 48.2 6.8 90 218-319 196-289 (369)
321 2jhf_A Alcohol dehydrogenase E 90.5 0.62 2.1E-05 46.4 8.2 93 218-319 193-294 (374)
322 1cdo_A Alcohol dehydrogenase; 90.4 0.53 1.8E-05 47.0 7.5 94 218-320 194-296 (374)
323 2h6e_A ADH-4, D-arabinose 1-de 90.3 0.37 1.2E-05 47.5 6.2 94 218-319 172-270 (344)
324 1p0f_A NADP-dependent alcohol 90.1 0.64 2.2E-05 46.3 7.8 93 218-319 193-294 (373)
325 2c7p_A Modification methylase 90.1 1.7 5.9E-05 42.9 10.8 125 218-352 12-149 (327)
326 2fzw_A Alcohol dehydrogenase c 90.0 0.64 2.2E-05 46.2 7.7 93 218-319 192-293 (373)
327 2j3h_A NADP-dependent oxidored 89.8 0.63 2.1E-05 45.7 7.4 92 218-319 157-256 (345)
328 3uko_A Alcohol dehydrogenase c 89.7 0.53 1.8E-05 47.0 6.9 94 218-320 195-297 (378)
329 4dvj_A Putative zinc-dependent 89.6 1.1 3.6E-05 44.7 9.1 90 218-318 173-270 (363)
330 1e3i_A Alcohol dehydrogenase, 89.2 0.71 2.4E-05 46.0 7.3 93 218-319 197-298 (376)
331 4b7c_A Probable oxidoreductase 89.1 0.53 1.8E-05 46.1 6.2 91 218-319 151-249 (336)
332 2hcy_A Alcohol dehydrogenase 1 89.1 0.41 1.4E-05 47.2 5.4 93 218-319 171-270 (347)
333 1rjd_A PPM1P, carboxy methyl t 89.0 2.5 8.6E-05 41.9 11.2 102 217-321 98-235 (334)
334 1jvb_A NAD(H)-dependent alcoho 88.9 0.55 1.9E-05 46.3 6.3 93 218-319 172-272 (347)
335 3m6i_A L-arabinitol 4-dehydrog 88.9 2.2 7.6E-05 42.1 10.7 94 218-320 181-285 (363)
336 1rjw_A ADH-HT, alcohol dehydro 88.8 1.8 6.3E-05 42.4 10.0 91 218-319 166-262 (339)
337 2zig_A TTHA0409, putative modi 88.4 0.72 2.5E-05 44.7 6.6 96 265-364 23-140 (297)
338 3jv7_A ADH-A; dehydrogenase, n 88.0 0.83 2.8E-05 44.9 6.9 93 218-320 173-272 (345)
339 3gms_A Putative NADPH:quinone 87.6 0.67 2.3E-05 45.5 5.9 92 218-320 146-245 (340)
340 1boo_A Protein (N-4 cytosine-s 87.4 0.9 3.1E-05 44.7 6.6 83 276-364 29-124 (323)
341 2c0c_A Zinc binding alcohol de 87.3 1.7 5.9E-05 43.1 8.8 91 218-319 165-262 (362)
342 3ps9_A TRNA 5-methylaminomethy 87.2 1.9 6.3E-05 46.6 9.6 100 218-317 68-218 (676)
343 2eih_A Alcohol dehydrogenase; 87.1 0.8 2.7E-05 45.0 6.1 92 218-320 168-267 (343)
344 1yb5_A Quinone oxidoreductase; 86.8 1.1 3.6E-05 44.5 6.8 91 218-319 172-270 (351)
345 3qwb_A Probable quinone oxidor 86.8 0.87 3E-05 44.5 6.2 92 218-320 150-249 (334)
346 3jyn_A Quinone oxidoreductase; 86.6 0.78 2.7E-05 44.7 5.7 93 218-321 142-242 (325)
347 1qor_A Quinone oxidoreductase; 86.5 0.74 2.5E-05 44.8 5.4 91 218-320 142-241 (327)
348 3ip1_A Alcohol dehydrogenase, 86.1 2.4 8E-05 42.7 9.1 95 218-320 215-320 (404)
349 3goh_A Alcohol dehydrogenase, 86.0 0.41 1.4E-05 46.5 3.3 86 218-319 144-230 (315)
350 1piw_A Hypothetical zinc-type 85.7 0.32 1.1E-05 48.4 2.3 94 218-319 181-277 (360)
351 3pvc_A TRNA 5-methylaminomethy 85.5 0.78 2.7E-05 49.8 5.5 100 217-316 59-209 (689)
352 4eez_A Alcohol dehydrogenase 1 85.3 3.2 0.00011 40.5 9.4 94 218-320 165-265 (348)
353 3nx4_A Putative oxidoreductase 85.1 1.4 4.8E-05 42.7 6.6 92 219-320 149-243 (324)
354 2d8a_A PH0655, probable L-thre 84.9 1.3 4.5E-05 43.5 6.4 92 218-319 169-268 (348)
355 1iz0_A Quinone oxidoreductase; 84.6 0.98 3.4E-05 43.5 5.2 91 218-319 127-219 (302)
356 1wly_A CAAR, 2-haloacrylate re 84.2 1.6 5.6E-05 42.5 6.7 92 218-320 147-246 (333)
357 2j8z_A Quinone oxidoreductase; 83.7 1.3 4.5E-05 43.7 5.8 92 218-320 164-263 (354)
358 4eye_A Probable oxidoreductase 83.4 1.3 4.4E-05 43.6 5.6 90 218-319 161-258 (342)
359 2b5w_A Glucose dehydrogenase; 82.9 1.8 6.2E-05 42.7 6.5 91 218-320 174-275 (357)
360 1vj0_A Alcohol dehydrogenase, 82.9 1.8 6E-05 43.3 6.4 95 218-320 197-300 (380)
361 3fbg_A Putative arginate lyase 82.7 2.4 8.3E-05 41.6 7.3 90 218-318 152-248 (346)
362 2py6_A Methyltransferase FKBM; 82.7 1.8 6.1E-05 44.1 6.4 44 216-259 226-270 (409)
363 3ubt_Y Modification methylase 81.4 9.9 0.00034 36.8 11.1 126 219-353 2-140 (331)
364 1boo_A Protein (N-4 cytosine-s 81.4 3.5 0.00012 40.4 7.8 54 195-260 240-293 (323)
365 2uyo_A Hypothetical protein ML 81.1 17 0.00059 35.3 12.7 99 217-320 103-220 (310)
366 1xa0_A Putative NADPH dependen 80.3 2.1 7.3E-05 41.5 5.8 91 219-319 152-247 (328)
367 4dup_A Quinone oxidoreductase; 79.7 2 6.7E-05 42.4 5.4 92 218-320 169-267 (353)
368 1tt7_A YHFP; alcohol dehydroge 79.7 2 6.7E-05 41.8 5.3 91 219-319 153-248 (330)
369 3dmg_A Probable ribosomal RNA 79.0 10 0.00035 38.0 10.5 95 218-320 47-141 (381)
370 4a2c_A Galactitol-1-phosphate 78.6 7.2 0.00025 37.9 9.1 93 218-320 162-262 (346)
371 2qrv_A DNA (cytosine-5)-methyl 77.6 5.2 0.00018 38.9 7.5 70 218-287 17-90 (295)
372 2zb4_A Prostaglandin reductase 77.3 3.8 0.00013 40.2 6.7 91 218-319 162-261 (357)
373 2cf5_A Atccad5, CAD, cinnamyl 77.2 2.2 7.4E-05 42.2 4.8 93 218-319 182-276 (357)
374 3gaz_A Alcohol dehydrogenase s 76.9 3.3 0.00011 40.6 6.0 89 218-320 152-248 (343)
375 1yqd_A Sinapyl alcohol dehydro 76.6 2.3 7.8E-05 42.2 4.8 93 218-319 189-283 (366)
376 3tqh_A Quinone oxidoreductase; 76.6 5.3 0.00018 38.6 7.4 89 218-318 154-245 (321)
377 3me5_A Cytosine-specific methy 75.0 14 0.00048 38.5 10.4 126 218-351 89-255 (482)
378 2dq4_A L-threonine 3-dehydroge 75.0 1.8 6E-05 42.5 3.4 91 218-319 166-263 (343)
379 1eg2_A Modification methylase 74.5 5.7 0.00019 39.0 7.0 56 194-261 229-287 (319)
380 3krt_A Crotonyl COA reductase; 73.9 7.2 0.00025 39.8 7.9 92 218-320 230-346 (456)
381 1g60_A Adenine-specific methyl 73.5 9.3 0.00032 35.9 8.0 50 298-364 54-103 (260)
382 2cdc_A Glucose dehydrogenase g 73.2 7.8 0.00027 38.2 7.7 89 218-320 182-280 (366)
383 4a0s_A Octenoyl-COA reductase/ 72.1 13 0.00045 37.6 9.4 92 218-320 222-338 (447)
384 3fwz_A Inner membrane protein 71.8 5.9 0.0002 33.3 5.6 94 218-319 8-106 (140)
385 2km1_A Protein DRE2; yeast, an 71.6 2.7 9.1E-05 36.4 3.3 43 274-316 53-96 (136)
386 2oo3_A Protein involved in cat 69.5 5.1 0.00017 38.9 5.1 100 218-321 93-201 (283)
387 3gqv_A Enoyl reductase; medium 67.4 8.9 0.00031 37.9 6.7 91 218-319 166-264 (371)
388 2vn8_A Reticulon-4-interacting 64.5 8.2 0.00028 38.2 5.7 92 218-319 185-281 (375)
389 1zsy_A Mitochondrial 2-enoyl t 63.6 33 0.0011 33.4 10.0 91 218-318 169-270 (357)
390 3tos_A CALS11; methyltransfera 62.2 15 0.0005 35.0 6.8 99 218-319 71-218 (257)
391 3ggo_A Prephenate dehydrogenas 59.2 49 0.0017 31.9 10.2 90 218-315 34-125 (314)
392 4f3n_A Uncharacterized ACR, CO 58.2 6.2 0.00021 40.6 3.5 41 218-258 139-183 (432)
393 1zkd_A DUF185; NESG, RPR58, st 56.2 16 0.00056 36.9 6.2 69 218-290 82-159 (387)
394 1h2b_A Alcohol dehydrogenase; 55.4 21 0.00072 34.9 6.9 93 218-319 188-286 (359)
395 3c85_A Putative glutathione-re 55.1 21 0.00073 31.0 6.2 95 218-319 40-140 (183)
396 3l9w_A Glutathione-regulated p 54.7 23 0.00078 35.9 7.1 94 218-320 5-104 (413)
397 2vhw_A Alanine dehydrogenase; 53.9 6.9 0.00024 39.2 3.0 98 217-318 168-268 (377)
398 1eg2_A Modification methylase 52.6 8.6 0.00029 37.7 3.4 43 277-319 55-107 (319)
399 3ius_A Uncharacterized conserv 52.3 96 0.0033 28.4 10.7 66 218-289 6-72 (286)
400 3pi7_A NADH oxidoreductase; gr 51.2 16 0.00054 35.6 5.1 91 218-319 166-264 (349)
401 3swr_A DNA (cytosine-5)-methyl 50.9 1.1E+02 0.0038 34.7 12.5 128 217-352 540-698 (1002)
402 3llv_A Exopolyphosphatase-rela 50.8 40 0.0014 27.7 7.0 92 218-319 7-104 (141)
403 2f1k_A Prephenate dehydrogenas 48.9 60 0.0021 30.1 8.7 85 219-315 2-88 (279)
404 2eez_A Alanine dehydrogenase; 47.3 11 0.00038 37.4 3.3 98 217-318 166-266 (369)
405 3p2y_A Alanine dehydrogenase/p 46.6 15 0.00051 37.1 4.1 95 217-317 184-301 (381)
406 4dcm_A Ribosomal RNA large sub 45.5 1.3E+02 0.0046 29.6 11.0 93 218-320 40-138 (375)
407 2ew2_A 2-dehydropantoate 2-red 44.8 80 0.0027 29.4 8.9 93 218-317 4-107 (316)
408 3g0o_A 3-hydroxyisobutyrate de 44.4 57 0.0019 30.9 7.8 89 218-317 8-101 (303)
409 2g5c_A Prephenate dehydrogenas 42.8 1.1E+02 0.0037 28.3 9.4 89 219-316 3-94 (281)
410 3ce6_A Adenosylhomocysteinase; 42.7 54 0.0018 34.1 7.8 87 218-320 275-363 (494)
411 4eso_A Putative oxidoreductase 42.7 1.4E+02 0.0049 27.1 10.2 101 218-321 9-141 (255)
412 1zcj_A Peroxisomal bifunctiona 42.5 1.1E+02 0.0036 31.3 10.0 90 217-316 37-148 (463)
413 4a27_A Synaptic vesicle membra 42.3 18 0.00061 35.3 3.9 90 218-320 144-240 (349)
414 3c24_A Putative oxidoreductase 39.9 98 0.0033 28.9 8.6 84 218-315 12-98 (286)
415 3hwr_A 2-dehydropantoate 2-red 39.3 1.2E+02 0.0042 28.8 9.4 93 218-319 20-121 (318)
416 4dkj_A Cytosine-specific methy 35.8 76 0.0026 32.0 7.4 41 218-258 11-55 (403)
417 1gu7_A Enoyl-[acyl-carrier-pro 35.5 47 0.0016 32.3 5.7 92 218-319 169-276 (364)
418 3ond_A Adenosylhomocysteinase; 35.2 1.6E+02 0.0056 30.5 9.9 86 218-320 266-354 (488)
419 3nbm_A PTS system, lactose-spe 34.4 84 0.0029 25.5 6.2 77 218-317 7-83 (108)
420 4e12_A Diketoreductase; oxidor 33.9 45 0.0015 31.4 5.1 89 218-315 5-118 (283)
421 4gua_A Non-structural polyprot 33.5 66 0.0023 34.2 6.5 71 273-353 215-295 (670)
422 4ft4_B DNA (cytosine-5)-methyl 32.9 2.5E+02 0.0087 30.4 11.7 44 217-260 212-259 (784)
423 3k6j_A Protein F01G10.3, confi 32.3 2.2E+02 0.0074 29.2 10.3 90 217-316 54-164 (460)
424 3trk_A Nonstructural polyprote 32.0 36 0.0012 32.8 3.9 66 278-352 209-284 (324)
425 4hp8_A 2-deoxy-D-gluconate 3-d 30.7 2E+02 0.007 26.7 9.1 69 218-289 10-88 (247)
426 3abi_A Putative uncharacterize 29.8 16 0.00056 35.9 1.3 65 217-287 16-84 (365)
427 4e21_A 6-phosphogluconate dehy 29.4 78 0.0027 31.2 6.2 90 218-317 23-114 (358)
428 4dio_A NAD(P) transhydrogenase 29.3 37 0.0013 34.5 3.8 98 217-318 190-312 (405)
429 2cvz_A Dehydrogenase, 3-hydrox 29.2 1E+02 0.0035 28.4 6.8 85 219-317 3-89 (289)
430 1l7d_A Nicotinamide nucleotide 28.8 23 0.00079 35.3 2.2 98 217-318 172-294 (384)
431 2h78_A Hibadh, 3-hydroxyisobut 28.7 76 0.0026 29.8 5.8 42 218-262 4-47 (302)
432 3qha_A Putative oxidoreductase 28.6 44 0.0015 31.7 4.0 87 218-317 16-104 (296)
433 3av4_A DNA (cytosine-5)-methyl 27.9 5.1E+02 0.017 30.3 13.3 43 218-261 852-894 (1330)
434 1f0y_A HCDH, L-3-hydroxyacyl-C 27.2 2.1E+02 0.0072 26.7 8.7 37 218-257 16-54 (302)
435 1tvm_A PTS system, galactitol- 27.0 1.2E+02 0.0041 24.5 6.0 33 255-287 44-76 (113)
436 2y0c_A BCEC, UDP-glucose dehyd 26.3 99 0.0034 31.7 6.5 96 217-316 8-126 (478)
437 2hwk_A Helicase NSP2; rossman 25.3 76 0.0026 30.8 4.9 43 279-321 205-257 (320)
438 3b1f_A Putative prephenate deh 25.0 2.3E+02 0.0078 26.2 8.4 89 218-315 7-98 (290)
439 1bg6_A N-(1-D-carboxylethyl)-L 24.7 1.4E+02 0.0047 28.5 6.9 93 218-317 5-108 (359)
440 1vpd_A Tartronate semialdehyde 24.4 68 0.0023 30.0 4.5 87 218-316 6-97 (299)
441 3i83_A 2-dehydropantoate 2-red 23.9 2E+02 0.0069 27.3 7.9 94 218-320 3-107 (320)
442 2dpo_A L-gulonate 3-dehydrogen 23.7 1.4E+02 0.0048 28.8 6.7 90 218-316 7-121 (319)
443 1lss_A TRK system potassium up 23.1 2.8E+02 0.0094 21.8 8.3 90 218-317 5-101 (140)
444 3hn2_A 2-dehydropantoate 2-red 23.1 1.1E+02 0.0039 28.9 5.9 93 218-319 3-104 (312)
445 1x13_A NAD(P) transhydrogenase 22.6 25 0.00086 35.4 1.1 96 217-318 172-292 (401)
446 4dll_A 2-hydroxy-3-oxopropiona 22.5 1.3E+02 0.0044 28.7 6.2 89 218-318 32-124 (320)
447 1mv8_A GMD, GDP-mannose 6-dehy 22.2 2E+02 0.0069 28.8 7.8 92 219-316 2-121 (436)
448 3zwc_A Peroxisomal bifunctiona 22.0 1.9E+02 0.0065 31.6 8.0 94 216-318 315-429 (742)
449 3ged_A Short-chain dehydrogena 21.8 2.1E+02 0.0073 26.4 7.4 68 218-288 3-83 (247)
450 1pjc_A Protein (L-alanine dehy 21.5 32 0.0011 33.9 1.6 99 217-319 167-268 (361)
451 3mog_A Probable 3-hydroxybutyr 21.1 2.5E+02 0.0085 28.8 8.3 89 218-316 6-118 (483)
452 1e2b_A Enzyme IIB-cellobiose; 20.5 47 0.0016 26.8 2.2 53 219-287 5-57 (106)
453 3e8x_A Putative NAD-dependent 20.0 2.6E+02 0.009 24.6 7.5 68 218-290 22-94 (236)
No 1
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.67 E-value=1.2e-15 Score=142.83 Aligned_cols=139 Identities=17% Similarity=0.181 Sum_probs=105.7
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCC-CeEEEeecccCCCCCCCCccEEEEcccccccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGL-PAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKK 296 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl-~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~d 296 (460)
.+|||||||+|.++..+++.+ .+++|+|+++.+++.++++.. .+.+...|...++++ ++||+|++..+++|+ ++
T Consensus 47 ~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~-~~ 121 (220)
T 3hnr_A 47 GNVLEFGVGTGNLTNKLLLAG---RTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVP-TSIDTIVSTYAFHHL-TD 121 (220)
T ss_dssp SEEEEECCTTSHHHHHHHHTT---CEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCC-SCCSEEEEESCGGGS-CH
T ss_pred CeEEEeCCCCCHHHHHHHhCC---CeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCC-CCeEEEEECcchhcC-Ch
Confidence 799999999999999999985 589999999999999988754 567777788888887 999999999877777 45
Q ss_pred HHH--HHHHHHHhcCCCcEEEEEeCCCCCCCCCC-----------c--hhhh-----HHHHHHHHHHHHhCeEEEeeecc
Q 012571 297 EGI--FLIEADRLLKPGGYFVLTSPESKPRGSSS-----------S--RKNK-----SLLKVMEEFTEKICWSLIAQQDE 356 (460)
Q Consensus 297 ~~~--~L~ei~RvLkPGG~lvl~~~~~~~~~~~~-----------~--~e~~-----~~w~~i~~l~~~~~w~~~~~~~~ 356 (460)
... +++++.++|||||.+++.++......... . .... ..-+.+..+.++.+|+++.....
T Consensus 122 ~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~~~ 201 (220)
T 3hnr_A 122 DEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFTRLN 201 (220)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEEECS
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEeecc
Confidence 555 99999999999999999987543210000 0 0000 01255677788888888776666
Q ss_pred eeeee
Q 012571 357 TFIWQ 361 (460)
Q Consensus 357 ~~iw~ 361 (460)
...|.
T Consensus 202 ~~~w~ 206 (220)
T 3hnr_A 202 HFVWV 206 (220)
T ss_dssp SSEEE
T ss_pred ceEEE
Confidence 55554
No 2
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.67 E-value=9.7e-16 Score=143.29 Aligned_cols=147 Identities=20% Similarity=0.178 Sum_probs=114.6
Q ss_pred HHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEeeccc
Q 012571 198 RQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISR 272 (460)
Q Consensus 198 ~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl-~~~~~~~d~~ 272 (460)
+.+.+.+....+ .+|||+|||+|.++..+++.+....+++++|+++.+++.|+++ ++ .+.+...|..
T Consensus 27 ~~~~~~~~~~~~--------~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~ 98 (219)
T 3dh0_A 27 EKVLKEFGLKEG--------MTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEEN 98 (219)
T ss_dssp HHHHHHHTCCTT--------CEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTT
T ss_pred HHHHHHhCCCCC--------CEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccc
Confidence 455566655544 7999999999999999998863346899999999999998776 43 4778888888
Q ss_pred CCCCCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEEEe
Q 012571 273 QLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIA 352 (460)
Q Consensus 273 ~Lp~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~~~ 352 (460)
.+++++++||+|++..+++++ +++..+++++.++|||||++++.++.................+.+..+.++.+|+.+.
T Consensus 99 ~~~~~~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 177 (219)
T 3dh0_A 99 KIPLPDNTVDFIFMAFTFHEL-SEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGR 177 (219)
T ss_dssp BCSSCSSCEEEEEEESCGGGC-SSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEE
T ss_pred cCCCCCCCeeEEEeehhhhhc-CCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEE
Confidence 899989999999999877777 6888899999999999999999987654432211112222345677888899999866
Q ss_pred e
Q 012571 353 Q 353 (460)
Q Consensus 353 ~ 353 (460)
.
T Consensus 178 ~ 178 (219)
T 3dh0_A 178 V 178 (219)
T ss_dssp E
T ss_pred E
Confidence 4
No 3
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.66 E-value=1e-16 Score=156.30 Aligned_cols=98 Identities=23% Similarity=0.288 Sum_probs=86.1
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEccccccccccH
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKKE 297 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~d~ 297 (460)
.+|||||||+|.++..|++.+ .+|+|+|+|+.|++.|++ ...+.+..++.+++|+++++||+|+|..++ ||. ++
T Consensus 41 ~~vLDvGcGtG~~~~~l~~~~---~~v~gvD~s~~ml~~a~~-~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~-h~~-~~ 114 (257)
T 4hg2_A 41 GDALDCGCGSGQASLGLAEFF---ERVHAVDPGEAQIRQALR-HPRVTYAVAPAEDTGLPPASVDVAIAAQAM-HWF-DL 114 (257)
T ss_dssp SEEEEESCTTTTTHHHHHTTC---SEEEEEESCHHHHHTCCC-CTTEEEEECCTTCCCCCSSCEEEEEECSCC-TTC-CH
T ss_pred CCEEEEcCCCCHHHHHHHHhC---CEEEEEeCcHHhhhhhhh-cCCceeehhhhhhhcccCCcccEEEEeeeh-hHh-hH
Confidence 689999999999999999886 579999999999998864 456788888999999999999999999865 664 57
Q ss_pred HHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 298 GIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 298 ~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
..+++|++|+|||||.|++.....
T Consensus 115 ~~~~~e~~rvLkpgG~l~~~~~~~ 138 (257)
T 4hg2_A 115 DRFWAELRRVARPGAVFAAVTYGL 138 (257)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECC
T ss_pred HHHHHHHHHHcCCCCEEEEEECCC
Confidence 789999999999999999987643
No 4
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.65 E-value=9.2e-16 Score=141.96 Aligned_cols=137 Identities=15% Similarity=0.109 Sum_probs=109.9
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEcccccccc-cc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWD-KK 296 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~-~d 296 (460)
.+|||||||+|.++..+++.+ .+++|+|+|+.+++.|+++...+.+...|...+++++++||+|++..+++|+. ++
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~ 119 (203)
T 3h2b_A 43 GVILDVGSGTGRWTGHLASLG---HQIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGE 119 (203)
T ss_dssp SCEEEETCTTCHHHHHHHHTT---CCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTT
T ss_pred CeEEEecCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHH
Confidence 689999999999999999985 47999999999999999987778888888888888899999999999888875 47
Q ss_pred HHHHHHHHHHhcCCCcEEEEEeCCCCCCCCC---CchhhhHHHHHHHHHHHHhCeEEEeeecce
Q 012571 297 EGIFLIEADRLLKPGGYFVLTSPESKPRGSS---SSRKNKSLLKVMEEFTEKICWSLIAQQDET 357 (460)
Q Consensus 297 ~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~---~~~e~~~~w~~i~~l~~~~~w~~~~~~~~~ 357 (460)
...+++++.++|||||++++.++........ .........+.+..+.++.+|+++......
T Consensus 120 ~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 183 (203)
T 3h2b_A 120 LPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDP 183 (203)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECT
T ss_pred HHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecC
Confidence 7889999999999999999998765431100 000111234567788889999997765433
No 5
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.64 E-value=6.3e-16 Score=144.60 Aligned_cols=98 Identities=13% Similarity=-0.068 Sum_probs=82.1
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc-----------------CCCeEEEeecccCCCCCC-C
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER-----------------GLPAMIGNFISRQLPYPS-L 279 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r-----------------gl~~~~~~~d~~~Lp~~~-~ 279 (460)
.+|||+|||+|..+..|+++| .+|+|+|+|+.|++.|+++ ...+.+..+|..++++++ +
T Consensus 24 ~~vLD~GCG~G~~~~~la~~g---~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~ 100 (203)
T 1pjz_A 24 ARVLVPLCGKSQDMSWLSGQG---YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIG 100 (203)
T ss_dssp CEEEETTTCCSHHHHHHHHHC---CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHH
T ss_pred CEEEEeCCCCcHhHHHHHHCC---CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCC
Confidence 799999999999999999986 5899999999999999876 235678888888998765 8
Q ss_pred CccEEEEccccccccc-cHHHHHHHHHHhcCCCcEEEEEe
Q 012571 280 SFDMVHCAQCGIIWDK-KEGIFLIEADRLLKPGGYFVLTS 318 (460)
Q Consensus 280 sFDlVvs~~~l~~~~~-d~~~~L~ei~RvLkPGG~lvl~~ 318 (460)
+||+|++..+++++.. +...++++++|+|||||++++..
T Consensus 101 ~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~ 140 (203)
T 1pjz_A 101 HCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT 140 (203)
T ss_dssp SEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred CEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 9999999877777653 34568999999999999844443
No 6
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.63 E-value=2.8e-15 Score=146.33 Aligned_cols=102 Identities=17% Similarity=0.166 Sum_probs=85.2
Q ss_pred CeEEEeCCCCchHHHHHHhcc-CceeEEEEeeCCHHHHHHHHHc----C--CCeEEEeecccCCCCCCCCccEEEEcccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLK-LMAVCVAVYEATGSQVQLALER----G--LPAMIGNFISRQLPYPSLSFDMVHCAQCG 290 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g-~~~~~v~giD~s~~~l~~A~~r----g--l~~~~~~~d~~~Lp~~~~sFDlVvs~~~l 290 (460)
.+|||||||+|.++..|+++. ....+++|+|+|+.|++.|+++ + .++.+..+|..++|++ .||+|++++++
T Consensus 72 ~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~--~~d~v~~~~~l 149 (261)
T 4gek_A 72 TQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE--NASMVVLNFTL 149 (261)
T ss_dssp CEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC--SEEEEEEESCG
T ss_pred CEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccccc--ccccceeeeee
Confidence 799999999999999998863 2346899999999999999876 2 3577888888888864 59999999877
Q ss_pred cccc-ccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 291 IIWD-KKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 291 ~~~~-~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
+++. ++...+|++++|+|||||.|++++...
T Consensus 150 ~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~ 181 (261)
T 4gek_A 150 QFLEPSERQALLDKIYQGLNPGGALVLSEKFS 181 (261)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred eecCchhHhHHHHHHHHHcCCCcEEEEEeccC
Confidence 6664 234568999999999999999998754
No 7
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.63 E-value=1.7e-15 Score=145.96 Aligned_cols=112 Identities=22% Similarity=0.344 Sum_probs=94.3
Q ss_pred HHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEeecc
Q 012571 197 SRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFIS 271 (460)
Q Consensus 197 ~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl-~~~~~~~d~ 271 (460)
.+.+.+.+....+ .+|||||||+|.++..+++.+ .+++++|+|+.|++.|+++ ++ .+.+..+|.
T Consensus 26 ~~~l~~~l~~~~~--------~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~ 94 (260)
T 1vl5_A 26 LAKLMQIAALKGN--------EEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA 94 (260)
T ss_dssp HHHHHHHHTCCSC--------CEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC
T ss_pred HHHHHHHhCCCCC--------CEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecH
Confidence 4456666665544 799999999999999999886 3899999999999998765 33 477888888
Q ss_pred cCCCCCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 272 RQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 272 ~~Lp~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
..+|+++++||+|++..+++|+ +++..+|+++.|+|||||++++.++.
T Consensus 95 ~~l~~~~~~fD~V~~~~~l~~~-~d~~~~l~~~~r~LkpgG~l~~~~~~ 142 (260)
T 1vl5_A 95 EQMPFTDERFHIVTCRIAAHHF-PNPASFVSEAYRVLKKGGQLLLVDNS 142 (260)
T ss_dssp -CCCSCTTCEEEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred HhCCCCCCCEEEEEEhhhhHhc-CCHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 9999999999999999877777 68889999999999999999998764
No 8
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.63 E-value=3.2e-15 Score=141.40 Aligned_cols=100 Identities=16% Similarity=0.110 Sum_probs=87.3
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCC-CeEEEeecccCCCCCCCCccEEEEcccccccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGL-PAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKK 296 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl-~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~d 296 (460)
.+|||||||+|.++..+++.+. +++|+|+|+.+++.|+++.. .+.+...|...+ +++++||+|++..+++|+ ++
T Consensus 44 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~-~~ 118 (250)
T 2p7i_A 44 GNLLELGSFKGDFTSRLQEHFN---DITCVEASEEAISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTHVLEHI-DD 118 (250)
T ss_dssp SCEEEESCTTSHHHHHHTTTCS---CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEESCGGGC-SS
T ss_pred CcEEEECCCCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc-CcCCcccEEEEhhHHHhh-cC
Confidence 6899999999999999998863 78999999999999988744 677777777777 468899999999987777 67
Q ss_pred HHHHHHHHH-HhcCCCcEEEEEeCCCC
Q 012571 297 EGIFLIEAD-RLLKPGGYFVLTSPESK 322 (460)
Q Consensus 297 ~~~~L~ei~-RvLkPGG~lvl~~~~~~ 322 (460)
+..+|++++ |+|||||++++.++...
T Consensus 119 ~~~~l~~~~~~~LkpgG~l~i~~~~~~ 145 (250)
T 2p7i_A 119 PVALLKRINDDWLAEGGRLFLVCPNAN 145 (250)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEEEECTT
T ss_pred HHHHHHHHHHHhcCCCCEEEEEcCChH
Confidence 888999999 99999999999998653
No 9
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.62 E-value=2e-15 Score=135.70 Aligned_cols=128 Identities=14% Similarity=0.106 Sum_probs=100.1
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEccccccccccH
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKKE 297 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~d~ 297 (460)
.+|||+|||+|.++..+++.+ .+++++|+++.+++.++++...+.+...| +++++++||+|++..+++|+ ++.
T Consensus 19 ~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~v~~~~~d---~~~~~~~~D~v~~~~~l~~~-~~~ 91 (170)
T 3i9f_A 19 GVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEKFDSVITLSDP---KEIPDNSVDFILFANSFHDM-DDK 91 (170)
T ss_dssp EEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHHCTTSEEESSG---GGSCTTCEEEEEEESCSTTC-SCH
T ss_pred CeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHhCCCcEEEeCC---CCCCCCceEEEEEccchhcc-cCH
Confidence 789999999999999999886 38999999999999999886667777766 77788999999999877777 688
Q ss_pred HHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEEEeee
Q 012571 298 GIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQQ 354 (460)
Q Consensus 298 ~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~~~~~ 354 (460)
..+++++.++|||||++++.++........++....-..+++..+.+ +|+.+...
T Consensus 92 ~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~ 146 (170)
T 3i9f_A 92 QHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRF 146 (170)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEcc
Confidence 88999999999999999999876543322111122222344555555 88876653
No 10
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.62 E-value=7.6e-16 Score=147.11 Aligned_cols=136 Identities=13% Similarity=0.113 Sum_probs=103.1
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcC---CCeEEEeecccCCCCCCCCccEEEEccccccc
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---LPAMIGNFISRQLPYPSLSFDMVHCAQCGIIW 293 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rg---l~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~ 293 (460)
..+|||||||+|.++..+++.+. ..++++|+|+.+++.|+++. ..+.+...|...+++++++||+|++..+++|+
T Consensus 94 ~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 171 (254)
T 1xtp_A 94 TSRALDCGAGIGRITKNLLTKLY--ATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWTAIYL 171 (254)
T ss_dssp CSEEEEETCTTTHHHHHTHHHHC--SEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESCGGGS
T ss_pred CCEEEEECCCcCHHHHHHHHhhc--CEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEEEcchhhhC
Confidence 37999999999999999998862 57999999999999998874 34677777888888888999999999987777
Q ss_pred c-ccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCC---CchhhhHHHHHHHHHHHHhCeEEEeee
Q 012571 294 D-KKEGIFLIEADRLLKPGGYFVLTSPESKPRGSS---SSRKNKSLLKVMEEFTEKICWSLIAQQ 354 (460)
Q Consensus 294 ~-~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~---~~~e~~~~w~~i~~l~~~~~w~~~~~~ 354 (460)
. ++...++++++++|||||++++.++........ ........-+.+..+.++.+|+.+...
T Consensus 172 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 236 (254)
T 1xtp_A 172 TDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEA 236 (254)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEee
Confidence 5 356789999999999999999998643221100 000111123556777788888876543
No 11
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.62 E-value=5.6e-15 Score=142.93 Aligned_cols=117 Identities=26% Similarity=0.392 Sum_probs=97.0
Q ss_pred hHHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEE
Q 012571 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIG 267 (460)
Q Consensus 194 ~~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~ 267 (460)
....+.+.+.+....+ .+|||||||+|.++..+++.. ..+++++|+|+.+++.|+++ ++ .+.+.
T Consensus 47 ~~~~~~l~~~~~~~~~--------~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~ 116 (273)
T 3bus_A 47 DRLTDEMIALLDVRSG--------DRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFS 116 (273)
T ss_dssp HHHHHHHHHHSCCCTT--------CEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEE
T ss_pred HHHHHHHHHhcCCCCC--------CEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEE
Confidence 3445556666555444 799999999999999999863 26899999999999988765 43 47788
Q ss_pred eecccCCCCCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 268 NFISRQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 268 ~~d~~~Lp~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
..|...+|+++++||+|++..+++|+ ++...+++++.++|||||++++.++..
T Consensus 117 ~~d~~~~~~~~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~L~pgG~l~i~~~~~ 169 (273)
T 3bus_A 117 YADAMDLPFEDASFDAVWALESLHHM-PDRGRALREMARVLRPGGTVAIADFVL 169 (273)
T ss_dssp ECCTTSCCSCTTCEEEEEEESCTTTS-SCHHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred ECccccCCCCCCCccEEEEechhhhC-CCHHHHHHHHHHHcCCCeEEEEEEeec
Confidence 88888999999999999999877777 677889999999999999999998754
No 12
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.62 E-value=6.7e-15 Score=139.47 Aligned_cols=133 Identities=19% Similarity=0.167 Sum_probs=105.3
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc--CCCeEEEeecccCCCCCCCCccEEEEccccccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER--GLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDK 295 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r--gl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~ 295 (460)
.+|||||||+|.++..+++.+ .+++++|+++.+++.++++ ...+.+...|...+++++++||+|++..+++|+ +
T Consensus 55 ~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-~ 130 (242)
T 3l8d_A 55 AEVLDVGCGDGYGTYKLSRTG---YKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWT-E 130 (242)
T ss_dssp CEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSS-S
T ss_pred CeEEEEcCCCCHHHHHHHHcC---CeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhc-c
Confidence 689999999999999999985 5899999999999999887 456778888888999989999999999877777 7
Q ss_pred cHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCC---------chhhhHHHHHHHHHHHHhCeEEEeee
Q 012571 296 KEGIFLIEADRLLKPGGYFVLTSPESKPRGSSS---------SRKNKSLLKVMEEFTEKICWSLIAQQ 354 (460)
Q Consensus 296 d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~---------~~e~~~~w~~i~~l~~~~~w~~~~~~ 354 (460)
++..++++++++|||||++++.++......... .......-..+..+.++.+|+++...
T Consensus 131 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 198 (242)
T 3l8d_A 131 EPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGI 198 (242)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEee
Confidence 888899999999999999999986543311000 00000112456788889999987643
No 13
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.61 E-value=5.1e-15 Score=141.88 Aligned_cols=135 Identities=13% Similarity=0.163 Sum_probs=103.1
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcC---CCeEEEeecccCCCCCCCCccEEEEcccccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---LPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWD 294 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rg---l~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~ 294 (460)
.+|||||||+|.++..+++.. ..+++|+|+|+.+++.|+++. ..+.+...|...+++++++||+|++..+++|+.
T Consensus 57 ~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 134 (266)
T 3ujc_A 57 SKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLIYSRDAILALS 134 (266)
T ss_dssp CEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEESCGGGSC
T ss_pred CEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEEeHHHHHHhcC
Confidence 799999999999999999873 268999999999999998874 467788888888999999999999998777774
Q ss_pred -ccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchh---------hhHHHHHHHHHHHHhCeEEEeee
Q 012571 295 -KKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRK---------NKSLLKVMEEFTEKICWSLIAQQ 354 (460)
Q Consensus 295 -~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e---------~~~~w~~i~~l~~~~~w~~~~~~ 354 (460)
++...+++++.|+|||||++++.++............ ....-+.+..+.++.+|+.+...
T Consensus 135 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 204 (266)
T 3ujc_A 135 LENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVVSK 204 (266)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred hHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEEEE
Confidence 5677899999999999999999987543311110000 00112445666677777765544
No 14
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.61 E-value=8.2e-15 Score=143.80 Aligned_cols=148 Identities=18% Similarity=0.192 Sum_probs=110.6
Q ss_pred hHHHHHHHHHH----ccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--C
Q 012571 194 KDYSRQIAEMI----GLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--P 263 (460)
Q Consensus 194 ~~~~~~i~~~l----~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~ 263 (460)
....+.+.+.+ ....+ .+|||||||+|.++..+++.. ..+++|+|+|+.+++.|+++ ++ .
T Consensus 64 ~~~~~~l~~~l~~~~~~~~~--------~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~ 133 (297)
T 2o57_A 64 LRTDEWLASELAMTGVLQRQ--------AKGLDLGAGYGGAARFLVRKF--GVSIDCLNIAPVQNKRNEEYNNQAGLADN 133 (297)
T ss_dssp HHHHHHHHHHHHHTTCCCTT--------CEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHHTCTTT
T ss_pred HHHHHHHHHHhhhccCCCCC--------CEEEEeCCCCCHHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHhcCCCcc
Confidence 34556666666 44433 799999999999999999872 15899999999999988765 33 4
Q ss_pred eEEEeecccCCCCCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhH---------
Q 012571 264 AMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKS--------- 334 (460)
Q Consensus 264 ~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~--------- 334 (460)
+.+..+|...+|+++++||+|++..+++|+ +++..+++++.|+|||||++++.++....... ......
T Consensus 134 ~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 210 (297)
T 2o57_A 134 ITVKYGSFLEIPCEDNSYDFIWSQDAFLHS-PDKLKVFQECARVLKPRGVMAITDPMKEDGID--KSSIQPILDRIKLHD 210 (297)
T ss_dssp EEEEECCTTSCSSCTTCEEEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEEEEECTTCC--GGGGHHHHHHHTCSS
T ss_pred eEEEEcCcccCCCCCCCEeEEEecchhhhc-CCHHHHHHHHHHHcCCCeEEEEEEeccCCCCc--hHHHHHHHHHhcCCC
Confidence 778888889999999999999999988888 56888999999999999999999875432211 001111
Q ss_pred --HHHHHHHHHHHhCeEEEeee
Q 012571 335 --LLKVMEEFTEKICWSLIAQQ 354 (460)
Q Consensus 335 --~w~~i~~l~~~~~w~~~~~~ 354 (460)
.-..+..+.++.+|+.+...
T Consensus 211 ~~~~~~~~~~l~~aGf~~~~~~ 232 (297)
T 2o57_A 211 MGSLGLYRSLAKECGLVTLRTF 232 (297)
T ss_dssp CCCHHHHHHHHHHTTEEEEEEE
T ss_pred CCCHHHHHHHHHHCCCeEEEEE
Confidence 12345566677777766543
No 15
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.60 E-value=1.4e-14 Score=140.20 Aligned_cols=131 Identities=16% Similarity=0.106 Sum_probs=102.4
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccCCCCCCCCccEEEEcccc
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPYPSLSFDMVHCAQCG 290 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~Lp~~~~sFDlVvs~~~l 290 (460)
..+|||||||+|.++..+++.+ ...++|+|+|+.+++.|+++ ++ .+.+...|..++++++++||+|++..++
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~ 124 (267)
T 3kkz_A 47 KSLIADIGCGTGGQTMVLAGHV--TGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGAI 124 (267)
T ss_dssp TCEEEEETCTTCHHHHHHHTTC--SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSCG
T ss_pred CCEEEEeCCCCCHHHHHHHhcc--CCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCCc
Confidence 3799999999999999999883 25899999999999998776 43 3788888889999989999999999877
Q ss_pred ccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHH----------HHHHHHHHHhCeEEEee
Q 012571 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLL----------KVMEEFTEKICWSLIAQ 353 (460)
Q Consensus 291 ~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w----------~~i~~l~~~~~w~~~~~ 353 (460)
+++ ++..+++++.++|||||++++.++....... .......| ..+..+.++.+|+.+..
T Consensus 125 ~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 193 (267)
T 3kkz_A 125 YNI--GFERGLNEWRKYLKKGGYLAVSECSWFTDER--PAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVAT 193 (267)
T ss_dssp GGT--CHHHHHHHHGGGEEEEEEEEEEEEEESSSCC--CHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEEE
T ss_pred eec--CHHHHHHHHHHHcCCCCEEEEEEeeecCCCC--hHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 776 6788999999999999999999875322111 11222333 34566677788877643
No 16
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.60 E-value=1.5e-14 Score=138.57 Aligned_cols=99 Identities=15% Similarity=0.165 Sum_probs=87.5
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCC--eEEEeecccCCCCCCCCccEEEEccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP--AMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~--~~~~~~d~~~Lp~~~~sFDlVvs~~~l~ 291 (460)
.+|||||||+|.++..+++.+. .+++|+|+|+.+++.|+++ ++. +.+...|...+++++++||+|++..+++
T Consensus 48 ~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 125 (257)
T 3f4k_A 48 AKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGAIY 125 (257)
T ss_dssp CEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESCSC
T ss_pred CeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecChHh
Confidence 6999999999999999999864 3899999999999988766 433 7788888899999999999999998777
Q ss_pred cccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 292 IWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 292 ~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
|+ +...+++++.++|||||++++.++.
T Consensus 126 ~~--~~~~~l~~~~~~L~pgG~l~~~~~~ 152 (257)
T 3f4k_A 126 NI--GFERGMNEWSKYLKKGGFIAVSEAS 152 (257)
T ss_dssp CC--CHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred hc--CHHHHHHHHHHHcCCCcEEEEEEee
Confidence 76 6778999999999999999999864
No 17
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.60 E-value=1.2e-14 Score=139.20 Aligned_cols=101 Identities=15% Similarity=0.116 Sum_probs=89.4
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcC--CCeEEEeecccCCCCCCCCccEEEEcccccccc
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG--LPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWD 294 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rg--l~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~ 294 (460)
..+|||||||+|.++..+++.+. .+++|+|+|+.+++.|+++. ..+.+...|...+++++++||+|++..+++|+
T Consensus 45 ~~~vLD~GcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~- 121 (253)
T 3g5l_A 45 QKTVLDLGCGFGWHCIYAAEHGA--KKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYI- 121 (253)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESCGGGC-
T ss_pred CCEEEEECCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchhhhhh-
Confidence 37999999999999999999864 28999999999999998873 46778888888999989999999999977777
Q ss_pred ccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 295 KKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 295 ~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
+++..++++++++|||||.++++.+.
T Consensus 122 ~~~~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 122 ASFDDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hhHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 78889999999999999999998653
No 18
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.59 E-value=2.1e-14 Score=133.51 Aligned_cols=100 Identities=18% Similarity=0.175 Sum_probs=87.3
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcC-CCeEEEeecccCCCCCCCCccEEEEcccccccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG-LPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKK 296 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rg-l~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~d 296 (460)
.+|||||||+|.++..+++.+ .+++++|+++.+++.|++.+ ..+.+...|...+ +++++||+|++..+++|+.+.
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~~~~~ 123 (218)
T 3ou2_A 48 GDVLELASGTGYWTRHLSGLA---DRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW-TPDRQWDAVFFAHWLAHVPDD 123 (218)
T ss_dssp SEEEEESCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC-CCSSCEEEEEEESCGGGSCHH
T ss_pred CeEEEECCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHhcCCCCeEEEecccccC-CCCCceeEEEEechhhcCCHH
Confidence 699999999999999999985 58999999999999998876 5677888888877 788999999999987777432
Q ss_pred -HHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 297 -EGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 297 -~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
...+++++.++|||||.+++.++..
T Consensus 124 ~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 124 RFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 3679999999999999999998765
No 19
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.59 E-value=5.5e-15 Score=142.99 Aligned_cols=114 Identities=18% Similarity=0.174 Sum_probs=97.9
Q ss_pred hHHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccC
Q 012571 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQ 273 (460)
Q Consensus 194 ~~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~ 273 (460)
....+.+.+.+....+ .+|||||||+|.++..+++.+ .+++|+|+|+.|++.|+++. ++.+...|.+.
T Consensus 20 ~~~~~~l~~~~~~~~~--------~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~-~~~~~~~d~~~ 87 (261)
T 3ege_A 20 IRIVNAIINLLNLPKG--------SVIADIGAGTGGYSVALANQG---LFVYAVEPSIVMRQQAVVHP-QVEWFTGYAEN 87 (261)
T ss_dssp HHHHHHHHHHHCCCTT--------CEEEEETCTTSHHHHHHHTTT---CEEEEECSCHHHHHSSCCCT-TEEEECCCTTS
T ss_pred HHHHHHHHHHhCCCCC--------CEEEEEcCcccHHHHHHHhCC---CEEEEEeCCHHHHHHHHhcc-CCEEEECchhh
Confidence 3466677777765444 799999999999999999864 68999999999999886665 78888888999
Q ss_pred CCCCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 274 LPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 274 Lp~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
+++++++||+|++..+++|+ +++..++++++|+|| ||++++.++..
T Consensus 88 ~~~~~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~Lk-gG~~~~~~~~~ 133 (261)
T 3ege_A 88 LALPDKSVDGVISILAIHHF-SHLEKSFQEMQRIIR-DGTIVLLTFDI 133 (261)
T ss_dssp CCSCTTCBSEEEEESCGGGC-SSHHHHHHHHHHHBC-SSCEEEEEECG
T ss_pred CCCCCCCEeEEEEcchHhhc-cCHHHHHHHHHHHhC-CcEEEEEEcCC
Confidence 99999999999999987777 788899999999999 99999888754
No 20
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.59 E-value=6.5e-15 Score=140.95 Aligned_cols=116 Identities=15% Similarity=0.137 Sum_probs=96.4
Q ss_pred hHHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEE
Q 012571 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIG 267 (460)
Q Consensus 194 ~~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~ 267 (460)
....+.+.+.+...++ .+|||||||+|.++..+++.. ..+++|+|+|+.+++.|+++ ++ ++.+.
T Consensus 22 ~~~~~~l~~~~~~~~~--------~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~ 91 (256)
T 1nkv_A 22 EEKYATLGRVLRMKPG--------TRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGVSERVHFI 91 (256)
T ss_dssp HHHHHHHHHHTCCCTT--------CEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEE
T ss_pred HHHHHHHHHhcCCCCC--------CEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEE
Confidence 4566677777665554 799999999999999999873 25789999999999988765 43 47888
Q ss_pred eecccCCCCCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 268 NFISRQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 268 ~~d~~~Lp~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
.+|..++++ +++||+|++..+++|+ ++...+|++++|+|||||++++.++..
T Consensus 92 ~~d~~~~~~-~~~fD~V~~~~~~~~~-~~~~~~l~~~~r~LkpgG~l~~~~~~~ 143 (256)
T 1nkv_A 92 HNDAAGYVA-NEKCDVAACVGATWIA-GGFAGAEELLAQSLKPGGIMLIGEPYW 143 (256)
T ss_dssp ESCCTTCCC-SSCEEEEEEESCGGGT-SSSHHHHHHHTTSEEEEEEEEEEEEEE
T ss_pred ECChHhCCc-CCCCCEEEECCChHhc-CCHHHHHHHHHHHcCCCeEEEEecCcc
Confidence 888888887 8899999999877676 577889999999999999999998643
No 21
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.58 E-value=1.6e-14 Score=140.82 Aligned_cols=111 Identities=16% Similarity=0.194 Sum_probs=92.2
Q ss_pred HHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCC
Q 012571 198 RQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYP 277 (460)
Q Consensus 198 ~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~ 277 (460)
+.+.+.+....+ .+|||||||+|.++..+++.+ ..++|+|+|+.|++.++++...+.+..+|...+++
T Consensus 47 ~~l~~~l~~~~~--------~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~- 114 (279)
T 3ccf_A 47 EDLLQLLNPQPG--------EFILDLGCGTGQLTEKIAQSG---AEVLGTDNAATMIEKARQNYPHLHFDVADARNFRV- 114 (279)
T ss_dssp CHHHHHHCCCTT--------CEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCC-
T ss_pred HHHHHHhCCCCC--------CEEEEecCCCCHHHHHHHhCC---CeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCc-
Confidence 345555554443 799999999999999999854 58999999999999998875556677778888887
Q ss_pred CCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 278 SLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 278 ~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
+++||+|++..+++++ +++..++++++|+|||||++++..+..
T Consensus 115 ~~~fD~v~~~~~l~~~-~d~~~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 115 DKPLDAVFSNAMLHWV-KEPEAAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp SSCEEEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred CCCcCEEEEcchhhhC-cCHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 6899999999866665 688899999999999999999988754
No 22
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.58 E-value=3e-14 Score=141.45 Aligned_cols=133 Identities=16% Similarity=0.074 Sum_probs=101.7
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccCCCCCCCCccEEEEcccc
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPYPSLSFDMVHCAQCG 290 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~Lp~~~~sFDlVvs~~~l 290 (460)
..+|||||||+|.++..++++. ..+++|+|+++.+++.|+++ ++ .+.+...|...+++++++||+|++..++
T Consensus 118 ~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 195 (312)
T 3vc1_A 118 DDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNEST 195 (312)
T ss_dssp TCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESCG
T ss_pred CCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCch
Confidence 3799999999999999999872 25899999999999998775 43 4788888899999999999999999877
Q ss_pred ccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhH-----------HHHHHHHHHHHhCeEEEeee
Q 012571 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKS-----------LLKVMEEFTEKICWSLIAQQ 354 (460)
Q Consensus 291 ~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~-----------~w~~i~~l~~~~~w~~~~~~ 354 (460)
+|+ +...+++++.|+|||||++++.++.......... .... ..+.+..+.++.+|+.+...
T Consensus 196 ~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~ 267 (312)
T 3vc1_A 196 MYV--DLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPS-KWVSQINAHFECNIHSRREYLRAMADNRLVPHTIV 267 (312)
T ss_dssp GGS--CHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCC-HHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEEE
T ss_pred hhC--CHHHHHHHHHHHcCCCcEEEEEEccccccccchh-HHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEEE
Confidence 777 4888999999999999999999875543211100 0000 12345566677777765544
No 23
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.58 E-value=2.1e-14 Score=133.24 Aligned_cols=101 Identities=18% Similarity=0.254 Sum_probs=89.0
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccCCCCCCCCccEEEEccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~ 291 (460)
.+|||||||+|.++..++++ ...+++++|+++.+++.|+++ ++ .+.+...|...+++++++||+|++..+++
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~ 122 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVF 122 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGG
T ss_pred CEEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHh
Confidence 48999999999999999987 237899999999999999876 33 57788888899999999999999998777
Q ss_pred cccccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 292 IWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 292 ~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
|+ +++..++++++++|||||++++.++..
T Consensus 123 ~~-~~~~~~l~~~~~~L~pgG~l~~~~~~~ 151 (219)
T 3dlc_A 123 FW-EDVATAFREIYRILKSGGKTYIGGGFG 151 (219)
T ss_dssp GC-SCHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred hc-cCHHHHHHHHHHhCCCCCEEEEEeccC
Confidence 77 788889999999999999999997643
No 24
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.57 E-value=1.7e-14 Score=137.53 Aligned_cols=112 Identities=22% Similarity=0.317 Sum_probs=94.6
Q ss_pred HHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEeeccc
Q 012571 198 RQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISR 272 (460)
Q Consensus 198 ~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl-~~~~~~~d~~ 272 (460)
..+.+.+....+ .+|||||||+|.++..+++.+ ..++++|+++.+++.++++ ++ .+.+...|.+
T Consensus 11 ~~~~~~~~~~~~--------~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~ 79 (239)
T 1xxl_A 11 GLMIKTAECRAE--------HRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAE 79 (239)
T ss_dssp HHHHHHHTCCTT--------CEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTT
T ss_pred chHHHHhCcCCC--------CEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccc
Confidence 345555655554 799999999999999999886 3899999999999988765 33 4777888888
Q ss_pred CCCCCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 273 QLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 273 ~Lp~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
.+++++++||+|++..+++|+ +++..++++++++|||||++++.++..
T Consensus 80 ~~~~~~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 80 SLPFPDDSFDIITCRYAAHHF-SDVRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp BCCSCTTCEEEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred cCCCCCCcEEEEEECCchhhc-cCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 999999999999999877777 678889999999999999999988754
No 25
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.57 E-value=1.1e-14 Score=138.69 Aligned_cols=131 Identities=16% Similarity=0.146 Sum_probs=98.0
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCC--CCCCCCccEEEEccccccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQL--PYPSLSFDMVHCAQCGIIWDK 295 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~L--p~~~~sFDlVvs~~~l~~~~~ 295 (460)
.+|||||||+|.++..+++.+ .+++|+|+|+.+++.|+++ +.+...|...+ ++++++||+|++..+++|+.+
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~---~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~ 116 (240)
T 3dli_A 43 RRVLDIGCGRGEFLELCKEEG---IESIGVDINEDMIKFCEGK---FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDP 116 (240)
T ss_dssp SCEEEETCTTTHHHHHHHHHT---CCEEEECSCHHHHHHHHTT---SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCG
T ss_pred CeEEEEeCCCCHHHHHHHhCC---CcEEEEECCHHHHHHHHhh---cceeeccHHHHhhhcCCCCeeEEEECCchhhCCc
Confidence 789999999999999999886 4689999999999999877 55556666554 788899999999998878742
Q ss_pred -cHHHHHHHHHHhcCCCcEEEEEeCCCCCCCC------CCchhhhHHHHHHHHHHHHhCeEEEeee
Q 012571 296 -KEGIFLIEADRLLKPGGYFVLTSPESKPRGS------SSSRKNKSLLKVMEEFTEKICWSLIAQQ 354 (460)
Q Consensus 296 -d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~------~~~~e~~~~w~~i~~l~~~~~w~~~~~~ 354 (460)
+...++++++|+|||||++++..+....... .+.......-+.+..+.++.+|+.+...
T Consensus 117 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~ 182 (240)
T 3dli_A 117 ERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVKIE 182 (240)
T ss_dssp GGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEEEE
Confidence 4478999999999999999999886532100 0000001112456677778888865543
No 26
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.56 E-value=2.5e-14 Score=137.09 Aligned_cols=97 Identities=21% Similarity=0.238 Sum_probs=86.1
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCCeEEEeecccCCCCCCCCccEEEEcccccc
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQLPYPSLSFDMVHCAQCGII 292 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~ 292 (460)
..+|||||||+|.++..+++.+ .+++++|+|+.|++.|+++ ...+.+...|...+++++++||+|++..++++
T Consensus 40 ~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 116 (263)
T 2yqz_A 40 EPVFLELGVGTGRIALPLIARG---YRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLWHL 116 (263)
T ss_dssp CCEEEEETCTTSTTHHHHHTTT---CEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGGG
T ss_pred CCEEEEeCCcCCHHHHHHHHCC---CEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCchhh
Confidence 3799999999999999999875 5899999999999999887 34677888888899998999999999986666
Q ss_pred ccccHHHHHHHHHHhcCCCcEEEEE
Q 012571 293 WDKKEGIFLIEADRLLKPGGYFVLT 317 (460)
Q Consensus 293 ~~~d~~~~L~ei~RvLkPGG~lvl~ 317 (460)
+ ++...+++++.++|||||++++.
T Consensus 117 ~-~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 117 V-PDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp C-TTHHHHHHHHHHHEEEEEEEEEE
T ss_pred c-CCHHHHHHHHHHHCCCCcEEEEE
Confidence 5 67888999999999999999998
No 27
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.56 E-value=1.8e-14 Score=147.61 Aligned_cols=135 Identities=19% Similarity=0.171 Sum_probs=104.2
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc---------C----CCeEEEeecccCC------CCC
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER---------G----LPAMIGNFISRQL------PYP 277 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r---------g----l~~~~~~~d~~~L------p~~ 277 (460)
..+|||||||+|.++..+++......+++|+|+|+.+++.|+++ | .++.+...|...+ +++
T Consensus 84 ~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~~ 163 (383)
T 4fsd_A 84 GATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGVP 163 (383)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCCC
T ss_pred CCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCCC
Confidence 47999999999999999988732336899999999999999876 3 4678888888877 899
Q ss_pred CCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhh----------HHHHHHHHHHHHhC
Q 012571 278 SLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNK----------SLLKVMEEFTEKIC 347 (460)
Q Consensus 278 ~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~----------~~w~~i~~l~~~~~ 347 (460)
+++||+|+++.++.++ +++..+|++++|+|||||++++.++.............. ..++.+..+.++.+
T Consensus 164 ~~~fD~V~~~~~l~~~-~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG 242 (383)
T 4fsd_A 164 DSSVDIVISNCVCNLS-TNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAEAG 242 (383)
T ss_dssp TTCEEEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHHTT
T ss_pred CCCEEEEEEccchhcC-CCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHHCC
Confidence 9999999999876665 688899999999999999999998654322110000001 11266778888999
Q ss_pred eEEEe
Q 012571 348 WSLIA 352 (460)
Q Consensus 348 w~~~~ 352 (460)
|+.+.
T Consensus 243 F~~v~ 247 (383)
T 4fsd_A 243 FRDVR 247 (383)
T ss_dssp CCCEE
T ss_pred CceEE
Confidence 97653
No 28
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.56 E-value=3.7e-14 Score=132.83 Aligned_cols=116 Identities=16% Similarity=0.080 Sum_probs=91.0
Q ss_pred HHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcC----C------Ce
Q 012571 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG----L------PA 264 (460)
Q Consensus 195 ~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rg----l------~~ 264 (460)
...+.+.+.+....+ .+|||||||+|.++..+++.+. ..+++|+|+|+.+++.|+++. + .+
T Consensus 16 ~~~~~l~~~l~~~~~--------~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v 86 (219)
T 3jwg_A 16 QRLGTVVAVLKSVNA--------KKVIDLGCGEGNLLSLLLKDKS-FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRI 86 (219)
T ss_dssp HHHHHHHHHHHHTTC--------CEEEEETCTTCHHHHHHHTSTT-CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTE
T ss_pred HHHHHHHHHHhhcCC--------CEEEEecCCCCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHHHhhccccccCcce
Confidence 345555555554433 7999999999999999998753 268999999999999998762 1 57
Q ss_pred EEEeecccCCCCCCCCccEEEEccccccccc-cHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 265 MIGNFISRQLPYPSLSFDMVHCAQCGIIWDK-KEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 265 ~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~-d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
.+...|...+++++++||+|++..++.|+.+ +...+++++.++|||||.++....
T Consensus 87 ~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 142 (219)
T 3jwg_A 87 SLFQSSLVYRDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPN 142 (219)
T ss_dssp EEEECCSSSCCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred EEEeCcccccccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccc
Confidence 7777788777877889999999998888742 225799999999999996665543
No 29
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.56 E-value=2.7e-14 Score=133.02 Aligned_cols=131 Identities=21% Similarity=0.279 Sum_probs=99.8
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc-CCCeEEEeecccCCCCCCCCccEEEEcccccccc-c
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER-GLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWD-K 295 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r-gl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~-~ 295 (460)
.+|||||||+|.++..+++.+ .+++++|+|+.+++.|+++ ++.+. ..+...++ ++++||+|++..+++|+. +
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~--~~d~~~~~-~~~~fD~v~~~~~l~~~~~~ 118 (211)
T 3e23_A 45 AKILELGCGAGYQAEAMLAAG---FDVDATDGSPELAAEASRRLGRPVR--TMLFHQLD-AIDAYDAVWAHACLLHVPRD 118 (211)
T ss_dssp CEEEESSCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHTSCCE--ECCGGGCC-CCSCEEEEEECSCGGGSCHH
T ss_pred CcEEEECCCCCHHHHHHHHcC---CeEEEECCCHHHHHHHHHhcCCceE--EeeeccCC-CCCcEEEEEecCchhhcCHH
Confidence 789999999999999999885 5899999999999999887 55444 44566777 789999999999888874 3
Q ss_pred cHHHHHHHHHHhcCCCcEEEEEeCCCCCCCC--CCchhhhHHHHHHHHHHHHhC-eEEEeee
Q 012571 296 KEGIFLIEADRLLKPGGYFVLTSPESKPRGS--SSSRKNKSLLKVMEEFTEKIC-WSLIAQQ 354 (460)
Q Consensus 296 d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~--~~~~e~~~~w~~i~~l~~~~~-w~~~~~~ 354 (460)
+...+++++.++|||||++++..+....... ..........+.+..+.++.+ |+.+...
T Consensus 119 ~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~ 180 (211)
T 3e23_A 119 ELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVE 180 (211)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEE
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEE
Confidence 6668999999999999999999775543210 000011123456677888888 8886653
No 30
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.56 E-value=9.2e-15 Score=138.19 Aligned_cols=102 Identities=18% Similarity=0.182 Sum_probs=87.4
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCC---CeEEEeecccCCCCCCCCccEEEEccccccc
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGL---PAMIGNFISRQLPYPSLSFDMVHCAQCGIIW 293 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl---~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~ 293 (460)
..+|||||||+|.++..+++.. ...+++++|+|+.+++.|+++.. .+.+...|...++++ ++||+|++..+++++
T Consensus 45 ~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~ 122 (234)
T 3dtn_A 45 NPDILDLGAGTGLLSAFLMEKY-PEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFE-EKYDMVVSALSIHHL 122 (234)
T ss_dssp SCEEEEETCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCC-SCEEEEEEESCGGGS
T ss_pred CCeEEEecCCCCHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCC-CCceEEEEeCccccC
Confidence 3799999999999999999884 23689999999999999988722 677888888888877 899999999887777
Q ss_pred cccHH--HHHHHHHHhcCCCcEEEEEeCCC
Q 012571 294 DKKEG--IFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 294 ~~d~~--~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
++.. .++++++|+|||||++++.++..
T Consensus 123 -~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 151 (234)
T 3dtn_A 123 -EDEDKKELYKRSYSILKESGIFINADLVH 151 (234)
T ss_dssp -CHHHHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred -CHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 4443 59999999999999999998754
No 31
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.55 E-value=2e-14 Score=139.50 Aligned_cols=98 Identities=11% Similarity=-0.020 Sum_probs=83.2
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcC----------------------CCeEEEeecccCCC
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG----------------------LPAMIGNFISRQLP 275 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rg----------------------l~~~~~~~d~~~Lp 275 (460)
.+|||+|||+|..+..|+++| .+|+|+|+|+.|++.|+++. ..+.+..+|...++
T Consensus 70 ~~vLD~GCG~G~~~~~La~~G---~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~ 146 (252)
T 2gb4_A 70 LRVFFPLCGKAIEMKWFADRG---HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLP 146 (252)
T ss_dssp CEEEETTCTTCTHHHHHHHTT---CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGG
T ss_pred CeEEEeCCCCcHHHHHHHHCC---CeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCC
Confidence 789999999999999999987 58999999999999997652 35778888888888
Q ss_pred CCC-CCccEEEEccccccccc-cHHHHHHHHHHhcCCCcEEEEEe
Q 012571 276 YPS-LSFDMVHCAQCGIIWDK-KEGIFLIEADRLLKPGGYFVLTS 318 (460)
Q Consensus 276 ~~~-~sFDlVvs~~~l~~~~~-d~~~~L~ei~RvLkPGG~lvl~~ 318 (460)
+.+ ++||+|++..+++++.+ +...+++++.|+|||||++++.+
T Consensus 147 ~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~ 191 (252)
T 2gb4_A 147 RANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAV 191 (252)
T ss_dssp GGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 764 89999999877777753 44579999999999999997544
No 32
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.55 E-value=1e-14 Score=142.67 Aligned_cols=115 Identities=22% Similarity=0.277 Sum_probs=93.2
Q ss_pred hHHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcC---------CCe
Q 012571 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---------LPA 264 (460)
Q Consensus 194 ~~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rg---------l~~ 264 (460)
..+.+.+.+.+....+ .+|||||||+|.++..+++.+ .+++|+|+|+.|++.|+++. ..+
T Consensus 43 ~~~~~~l~~~l~~~~~--------~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~ 111 (293)
T 3thr_A 43 AEYKAWLLGLLRQHGC--------HRVLDVACGTGVDSIMLVEEG---FSVTSVDASDKMLKYALKERWNRRKEPAFDKW 111 (293)
T ss_dssp HHHHHHHHHHHHHTTC--------CEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTC
T ss_pred HHHHHHHHHHhcccCC--------CEEEEecCCCCHHHHHHHHCC---CeEEEEECCHHHHHHHHHhhhhccccccccee
Confidence 3455566666654443 789999999999999999986 48999999999999997641 245
Q ss_pred EEEeecccCCC---CCCCCccEEEEc-ccccccccc-------HHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 265 MIGNFISRQLP---YPSLSFDMVHCA-QCGIIWDKK-------EGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 265 ~~~~~d~~~Lp---~~~~sFDlVvs~-~~l~~~~~d-------~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
.+...+...++ +++++||+|+|. .++.|+ .+ ...++++++++|||||++++..+.
T Consensus 112 ~~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~-~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 112 VIEEANWLTLDKDVPAGDGFDAVICLGNSFAHL-PDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp EEEECCGGGHHHHSCCTTCEEEEEECTTCGGGS-CCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred eEeecChhhCccccccCCCeEEEEEcChHHhhc-CccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 66777777777 788999999998 777777 45 678999999999999999999874
No 33
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.55 E-value=4.2e-15 Score=153.47 Aligned_cols=149 Identities=15% Similarity=0.142 Sum_probs=109.0
Q ss_pred hHHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEE---Eeec
Q 012571 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMI---GNFI 270 (460)
Q Consensus 194 ~~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~---~~~d 270 (460)
..+.+.+.+.+....+ .+|||||||+|.++..+++++ .+++|+|+|+.|++.|++++++... ...+
T Consensus 93 ~~~~~~l~~~~~~~~~--------~~VLDiGcG~G~~~~~l~~~g---~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~ 161 (416)
T 4e2x_A 93 AMLARDFLATELTGPD--------PFIVEIGCNDGIMLRTIQEAG---VRHLGFEPSSGVAAKAREKGIRVRTDFFEKAT 161 (416)
T ss_dssp HHHHHHHHHTTTCSSS--------CEEEEETCTTTTTHHHHHHTT---CEEEEECCCHHHHHHHHTTTCCEECSCCSHHH
T ss_pred HHHHHHHHHHhCCCCC--------CEEEEecCCCCHHHHHHHHcC---CcEEEECCCHHHHHHHHHcCCCcceeeechhh
Confidence 3444445444444333 799999999999999999986 4899999999999999988766543 2234
Q ss_pred ccCCCCCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCC-------CCCCCchhhhHHHHHHHHHH
Q 012571 271 SRQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPESKP-------RGSSSSRKNKSLLKVMEEFT 343 (460)
Q Consensus 271 ~~~Lp~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~-------~~~~~~~e~~~~w~~i~~l~ 343 (460)
.+.+++++++||+|++..+++|+ +++..++++++|+|||||++++..+.... .............+.+..+.
T Consensus 162 ~~~l~~~~~~fD~I~~~~vl~h~-~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll 240 (416)
T 4e2x_A 162 ADDVRRTEGPANVIYAANTLCHI-PYVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMA 240 (416)
T ss_dssp HHHHHHHHCCEEEEEEESCGGGC-TTHHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHH
T ss_pred HhhcccCCCCEEEEEECChHHhc-CCHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHH
Confidence 55567778999999999988888 68889999999999999999999875210 00000001112335677888
Q ss_pred HHhCeEEEeee
Q 012571 344 EKICWSLIAQQ 354 (460)
Q Consensus 344 ~~~~w~~~~~~ 354 (460)
++.+|+.+...
T Consensus 241 ~~aGf~~~~~~ 251 (416)
T 4e2x_A 241 QRCGFELVDVQ 251 (416)
T ss_dssp HHTTEEEEEEE
T ss_pred HHcCCEEEEEE
Confidence 99999887654
No 34
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.55 E-value=3.4e-14 Score=132.60 Aligned_cols=98 Identities=19% Similarity=0.252 Sum_probs=84.9
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcC---CCeEEEeecccCCCCCCCCccEEEEcccccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---LPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWD 294 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rg---l~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~ 294 (460)
.+|||||||+|.++..+++.+ .+++++|+++.+++.|+++. ..+.+...|...++ ++++||+|++..+++|+.
T Consensus 53 ~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~ 128 (216)
T 3ofk_A 53 SNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS-TAELFDLIVVAEVLYYLE 128 (216)
T ss_dssp EEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC-CSCCEEEEEEESCGGGSS
T ss_pred CcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC-CCCCccEEEEccHHHhCC
Confidence 789999999999999999885 58999999999999998873 25678888888887 688999999998877774
Q ss_pred ccH---HHHHHHHHHhcCCCcEEEEEeCC
Q 012571 295 KKE---GIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 295 ~d~---~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
++ ..+++++.++|||||+++++++.
T Consensus 129 -~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 129 -DMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp -SHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred -CHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 44 46799999999999999998764
No 35
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.55 E-value=7.8e-14 Score=130.93 Aligned_cols=101 Identities=26% Similarity=0.343 Sum_probs=87.4
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC------CeEEEeecccCCCCCCCCccEEEEc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL------PAMIGNFISRQLPYPSLSFDMVHCA 287 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl------~~~~~~~d~~~Lp~~~~sFDlVvs~ 287 (460)
.+|||||||+|.++..+++.+ .+++++|+++.+++.|+++ ++ .+.+...|...+++++++||+|++.
T Consensus 32 ~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 108 (235)
T 3sm3_A 32 DEILDIGCGSGKISLELASKG---YSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQ 108 (235)
T ss_dssp CEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEE
T ss_pred CeEEEECCCCCHHHHHHHhCC---CeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEc
Confidence 789999999999999999985 5899999999999999875 22 3567777888889889999999999
Q ss_pred cccccccccHH---HHHHHHHHhcCCCcEEEEEeCCCC
Q 012571 288 QCGIIWDKKEG---IFLIEADRLLKPGGYFVLTSPESK 322 (460)
Q Consensus 288 ~~l~~~~~d~~---~~L~ei~RvLkPGG~lvl~~~~~~ 322 (460)
.++.++ +++. .+++++.++|||||++++.++...
T Consensus 109 ~~l~~~-~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (235)
T 3sm3_A 109 AFLTSV-PDPKERSRIIKEVFRVLKPGAYLYLVEFGQN 145 (235)
T ss_dssp SCGGGC-CCHHHHHHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred chhhcC-CCHHHHHHHHHHHHHHcCCCeEEEEEECCcc
Confidence 877777 4555 799999999999999999987654
No 36
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.55 E-value=4.2e-14 Score=138.09 Aligned_cols=99 Identities=16% Similarity=0.155 Sum_probs=86.9
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccCCC-CCCCCccEEEEcccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLP-YPSLSFDMVHCAQCG 290 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~Lp-~~~~sFDlVvs~~~l 290 (460)
.+|||||||+|.++..+++.+ .+++|+|+|+.+++.|+++ ++ .+.+..+|...++ +++++||+|++..++
T Consensus 70 ~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l 146 (285)
T 4htf_A 70 LRVLDAGGGEGQTAIKMAERG---HQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVL 146 (285)
T ss_dssp CEEEEETCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCG
T ss_pred CEEEEeCCcchHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchh
Confidence 689999999999999999985 5899999999999999876 33 4667778888887 778999999999877
Q ss_pred ccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 291 ~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
.|+ +++..+++++.++|||||++++.++.
T Consensus 147 ~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (285)
T 4htf_A 147 EWV-ADPRSVLQTLWSVLRPGGVLSLMFYN 175 (285)
T ss_dssp GGC-SCHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred hcc-cCHHHHHHHHHHHcCCCeEEEEEEeC
Confidence 777 68888999999999999999999864
No 37
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.54 E-value=4.2e-14 Score=133.86 Aligned_cols=100 Identities=21% Similarity=0.273 Sum_probs=87.4
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCC--CeEEEeecccCCCCCCCCccEEEEccccccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGL--PAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDK 295 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl--~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~ 295 (460)
.+|||||||+|.++..+++.+. .+++++|+|+.+++.|+++.. .+.+...|...+++++++||+|++..+++|+ +
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-~ 121 (243)
T 3bkw_A 45 LRIVDLGCGFGWFCRWAHEHGA--SYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLALHYV-E 121 (243)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEESCGGGC-S
T ss_pred CEEEEEcCcCCHHHHHHHHCCC--CeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEecccccc-c
Confidence 7999999999999999998853 289999999999999988743 4677777888888888999999999877776 6
Q ss_pred cHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 296 KEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 296 d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
+...+++++.++|||||++++.++.
T Consensus 122 ~~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 122 DVARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hHHHHHHHHHHhcCcCcEEEEEeCC
Confidence 7888999999999999999998864
No 38
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.54 E-value=2.5e-14 Score=138.07 Aligned_cols=99 Identities=23% Similarity=0.368 Sum_probs=87.8
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEccccccccccH
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKKE 297 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~d~ 297 (460)
.+|||||||+|.++..+++.+ .+++++|+|+.+++.|+++.... +...|...+++++++||+|++..++.|+.+++
T Consensus 56 ~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~-~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~ 131 (260)
T 2avn_A 56 CRVLDLGGGTGKWSLFLQERG---FEVVLVDPSKEMLEVAREKGVKN-VVEAKAEDLPFPSGAFEAVLALGDVLSYVENK 131 (260)
T ss_dssp CEEEEETCTTCHHHHHHHTTT---CEEEEEESCHHHHHHHHHHTCSC-EEECCTTSCCSCTTCEEEEEECSSHHHHCSCH
T ss_pred CeEEEeCCCcCHHHHHHHHcC---CeEEEEeCCHHHHHHHHhhcCCC-EEECcHHHCCCCCCCEEEEEEcchhhhccccH
Confidence 789999999999999999885 58999999999999998875432 66677888898899999999988788887778
Q ss_pred HHHHHHHHHhcCCCcEEEEEeCC
Q 012571 298 GIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 298 ~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
..+++++.++|||||.+++..++
T Consensus 132 ~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 132 DKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEB
T ss_pred HHHHHHHHHHcCCCeEEEEEeCC
Confidence 89999999999999999999874
No 39
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.54 E-value=2.1e-14 Score=137.50 Aligned_cols=101 Identities=16% Similarity=0.154 Sum_probs=88.0
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEccccccccccH
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKKE 297 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~d~ 297 (460)
.+|||||||+|.++..+++... ..+++++|+|+.|++.++++...+.+...|...++ ++++||+|++..+++++ ++.
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~-~~~ 111 (259)
T 2p35_A 35 LNGYDLGCGPGNSTELLTDRYG-VNVITGIDSDDDMLEKAADRLPNTNFGKADLATWK-PAQKADLLYANAVFQWV-PDH 111 (259)
T ss_dssp SSEEEETCTTTHHHHHHHHHHC-TTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEEEEESCGGGS-TTH
T ss_pred CEEEEecCcCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcC-ccCCcCEEEEeCchhhC-CCH
Confidence 7899999999999999998731 25789999999999999988667778888888888 78899999999866665 788
Q ss_pred HHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 298 GIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 298 ~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
..++++++++|||||++++.++..
T Consensus 112 ~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 112 LAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp HHHHHHHGGGEEEEEEEEEEEECC
T ss_pred HHHHHHHHHhcCCCeEEEEEeCCC
Confidence 889999999999999999998743
No 40
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.54 E-value=8.4e-14 Score=131.97 Aligned_cols=131 Identities=17% Similarity=0.069 Sum_probs=101.1
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCC------CeEEEeecccCCCCCCCCccEEEEccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGL------PAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl------~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~ 291 (460)
.+|||||||+|.++..+++.+ .+++|+|+|+.+++.|+++.. .+.+..+|...++ ++++||+|++..+++
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~ 143 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPE---RFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVFFC 143 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTT---EEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESSTT
T ss_pred CCEEEeCCCCCHHHHHHHhCC---CeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChhhh
Confidence 589999999999999998765 689999999999999987732 3778888888876 466999999998777
Q ss_pred ccc-ccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEEEeee
Q 012571 292 IWD-KKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQQ 354 (460)
Q Consensus 292 ~~~-~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~~~~~ 354 (460)
++. ++...+++++.++|||||++++.+.........++ .....+.+..+.++.+|+.+...
T Consensus 144 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~Gf~~~~~~ 205 (235)
T 3lcc_A 144 AIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPP--YKVDVSTFEEVLVPIGFKAVSVE 205 (235)
T ss_dssp TSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSS--CCCCHHHHHHHHGGGTEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCC--ccCCHHHHHHHHHHcCCeEEEEE
Confidence 774 26678999999999999999998875543211111 11223556778888999886543
No 41
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.54 E-value=5.2e-14 Score=130.87 Aligned_cols=98 Identities=28% Similarity=0.347 Sum_probs=86.0
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEccccccccccH
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKKE 297 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~d~ 297 (460)
.+|||||||+|.++..+ +. .+++++|+|+.+++.++++...+.+...|...+++++++||+|++..+++|+ +++
T Consensus 38 ~~vLdiG~G~G~~~~~l---~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-~~~ 111 (211)
T 2gs9_A 38 ESLLEVGAGTGYWLRRL---PY--PQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFV-EDV 111 (211)
T ss_dssp SEEEEETCTTCHHHHHC---CC--SEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTC-SCH
T ss_pred CeEEEECCCCCHhHHhC---CC--CeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhc-CCH
Confidence 79999999999999887 31 2899999999999999988656677778888899989999999999877776 688
Q ss_pred HHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 298 GIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 298 ~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
..+++++.++|||||.+++.++..
T Consensus 112 ~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 112 ERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECT
T ss_pred HHHHHHHHHHcCCCCEEEEEecCC
Confidence 889999999999999999999854
No 42
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.54 E-value=4.6e-14 Score=132.18 Aligned_cols=116 Identities=16% Similarity=0.121 Sum_probs=91.2
Q ss_pred HHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC------Ce
Q 012571 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL------PA 264 (460)
Q Consensus 195 ~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl------~~ 264 (460)
...+.+.+.+....+ .+|||||||+|.++..+++++. ...++|+|+|+.+++.|+++ ++ .+
T Consensus 16 ~~~~~l~~~l~~~~~--------~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v 86 (217)
T 3jwh_A 16 QRMNGVVAALKQSNA--------RRVIDLGCGQGNLLKILLKDSF-FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERL 86 (217)
T ss_dssp HHHHHHHHHHHHTTC--------CEEEEETCTTCHHHHHHHHCTT-CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTE
T ss_pred HHHHHHHHHHHhcCC--------CEEEEeCCCCCHHHHHHHhhCC-CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcce
Confidence 345555566654443 7999999999999999998753 25899999999999999876 22 57
Q ss_pred EEEeecccCCCCCCCCccEEEEccccccccc-cHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 265 MIGNFISRQLPYPSLSFDMVHCAQCGIIWDK-KEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 265 ~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~-d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
.+...|...++.++++||+|++..++.|+.+ +...+++++.++|||||.++++..
T Consensus 87 ~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 87 QLIQGALTYQDKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp EEEECCTTSCCGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred EEEeCCcccccccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 7777777777777789999999998877742 236799999999999997776654
No 43
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.54 E-value=3.5e-14 Score=138.61 Aligned_cols=99 Identities=20% Similarity=0.173 Sum_probs=83.8
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccCCCCCCCCccEEEEccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~ 291 (460)
.+|||||||+|.++..+++... .+++|+|+|+.+++.|+++ ++ .+.+...|...++ ++||+|++..+++
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~fD~v~~~~~l~ 140 (287)
T 1kpg_A 66 MTLLDVGCGWGATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD---EPVDRIVSIGAFE 140 (287)
T ss_dssp CEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---CCCSEEEEESCGG
T ss_pred CEEEEECCcccHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---CCeeEEEEeCchh
Confidence 7999999999999999995532 4899999999999999876 32 5667777777665 7899999999888
Q ss_pred ccc-ccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 292 IWD-KKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 292 ~~~-~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
|+. ++...+++++.|+|||||++++.++..
T Consensus 141 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 141 HFGHERYDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp GTCTTTHHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred hcChHHHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 885 467789999999999999999998754
No 44
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.54 E-value=9.5e-14 Score=127.21 Aligned_cols=100 Identities=18% Similarity=0.270 Sum_probs=85.2
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEeecccCCCCCCCCccEEEEcccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQLPYPSLSFDMVHCAQCGII 292 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl-~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~ 292 (460)
.+|||+|||+|.++..+++.+ .+++++|+|+.+++.++++ ++ .+.+...|...+++ +++||+|++..++++
T Consensus 34 ~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~~ 109 (199)
T 2xvm_A 34 GKTLDLGCGNGRNSLYLAANG---YDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTVVLMF 109 (199)
T ss_dssp CEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEESCGGG
T ss_pred CeEEEEcCCCCHHHHHHHHCC---CeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcchhhh
Confidence 699999999999999999885 5899999999999988764 44 57777888888887 889999999987777
Q ss_pred cc-ccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 293 WD-KKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 293 ~~-~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
+. ++...+++++.++|||||++++.++..
T Consensus 110 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (199)
T 2xvm_A 110 LEAKTIPGLIANMQRCTKPGGYNLIVAAMD 139 (199)
T ss_dssp SCGGGHHHHHHHHHHTEEEEEEEEEEEEBC
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEEeec
Confidence 64 366789999999999999988876543
No 45
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.54 E-value=4e-14 Score=138.70 Aligned_cols=102 Identities=17% Similarity=0.219 Sum_probs=88.4
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCCeEEEeecccCCCCCCCCccEEEEcccccc
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQLPYPSLSFDMVHCAQCGII 292 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~ 292 (460)
..+|||||||+|.++..+++......+++|+|+|+.+++.|+++ +.++.+...|..++++ +++||+|++..++.+
T Consensus 23 ~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~l~~ 101 (284)
T 3gu3_A 23 PVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIEL-NDKYDIAICHAFLLH 101 (284)
T ss_dssp CCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCC-SSCEEEEEEESCGGG
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCc-CCCeeEEEECChhhc
Confidence 37999999999999999998743346899999999999998876 3467788888888887 469999999987666
Q ss_pred ccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 293 WDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 293 ~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
+ +++..++++++++|||||++++.++.
T Consensus 102 ~-~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 102 M-TTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp C-SSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred C-CCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 6 68889999999999999999999986
No 46
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.54 E-value=4.5e-14 Score=136.90 Aligned_cols=102 Identities=21% Similarity=0.287 Sum_probs=88.9
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEeecccCCCCCCCCccEEEEcccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQLPYPSLSFDMVHCAQCGII 292 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl-~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~ 292 (460)
.+|||||||+|.++..+++.+. ..+++++|+++.+++.|+++ ++ .+.+...|...+++++++||+|++..++.+
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 117 (276)
T 3mgg_A 39 AKVLEAGCGIGAQTVILAKNNP-DAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVLEH 117 (276)
T ss_dssp CEEEETTCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESCGGG
T ss_pred CeEEEecCCCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEechhhh
Confidence 7999999999999999998842 36899999999999998776 33 477788888899999999999999987777
Q ss_pred ccccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 293 WDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 293 ~~~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
+ +++..+++++.++|||||++++.++..
T Consensus 118 ~-~~~~~~l~~~~~~L~pgG~l~~~~~~~ 145 (276)
T 3mgg_A 118 L-QSPEEALKSLKKVLKPGGTITVIEGDH 145 (276)
T ss_dssp C-SCHHHHHHHHHHHEEEEEEEEEEEECG
T ss_pred c-CCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 7 677889999999999999999998654
No 47
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.54 E-value=4.5e-14 Score=131.67 Aligned_cols=130 Identities=18% Similarity=0.152 Sum_probs=95.3
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCC---CCCC-CCccEEEEccccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQL---PYPS-LSFDMVHCAQCGIIW 293 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~L---p~~~-~sFDlVvs~~~l~~~ 293 (460)
.+|||||||+|.++..+++.+ .+++++|+|+.+++.|+++ ....+...+...+ ++.. ++||+|++..+++
T Consensus 54 ~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-- 127 (227)
T 3e8s_A 54 ERVLDLGCGEGWLLRALADRG---IEAVGVDGDRTLVDAARAA-GAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-- 127 (227)
T ss_dssp SEEEEETCTTCHHHHHHHTTT---CEEEEEESCHHHHHHHHHT-CSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC--
T ss_pred CEEEEeCCCCCHHHHHHHHCC---CEEEEEcCCHHHHHHHHHh-cccccchhhHHhhcccccccCCCccEEEECchhh--
Confidence 799999999999999999885 5899999999999999887 3344444444444 4444 4599999998666
Q ss_pred cccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCC--C-----------------chhhhHHHHHHHHHHHHhCeEEEee
Q 012571 294 DKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSS--S-----------------SRKNKSLLKVMEEFTEKICWSLIAQ 353 (460)
Q Consensus 294 ~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~--~-----------------~~e~~~~w~~i~~l~~~~~w~~~~~ 353 (460)
..++..++++++++|||||++++.++........ . ........+.+..+.++.+|+++..
T Consensus 128 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 206 (227)
T 3e8s_A 128 HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVSL 206 (227)
T ss_dssp SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEEE
T ss_pred hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEEE
Confidence 4788889999999999999999998865332110 0 0001113355667778888877654
No 48
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.52 E-value=6e-14 Score=135.22 Aligned_cols=98 Identities=22% Similarity=0.200 Sum_probs=86.2
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEcc-cccccc--
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQ-CGIIWD-- 294 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~-~l~~~~-- 294 (460)
.+|||||||+|.++..+++.+ .+++|+|+|+.+++.|+++...+.+...|...+++ +++||+|+|.. ++.|+.
T Consensus 52 ~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~~~ 127 (263)
T 3pfg_A 52 ASLLDVACGTGMHLRHLADSF---GTVEGLELSADMLAIARRRNPDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLAGQ 127 (263)
T ss_dssp CEEEEETCTTSHHHHHHTTTS---SEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCC-SCCEEEEEECTTGGGGSCHH
T ss_pred CcEEEeCCcCCHHHHHHHHcC---CeEEEEECCHHHHHHHHhhCCCCEEEECChHHCCc-cCCcCEEEEcCchhhhcCCH
Confidence 789999999999999999886 47999999999999999886677888888888887 78999999997 777764
Q ss_pred ccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 295 KKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 295 ~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
++...++++++++|||||++++...
T Consensus 128 ~~~~~~l~~~~~~L~pgG~l~i~~~ 152 (263)
T 3pfg_A 128 AELDAALERFAAHVLPDGVVVVEPW 152 (263)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEec
Confidence 3566799999999999999999865
No 49
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.52 E-value=6.4e-14 Score=137.97 Aligned_cols=99 Identities=15% Similarity=0.153 Sum_probs=85.4
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc-------CCCeEEEeecccCCCCCC------CCccEE
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER-------GLPAMIGNFISRQLPYPS------LSFDMV 284 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r-------gl~~~~~~~d~~~Lp~~~------~sFDlV 284 (460)
.+|||||||+|.++..+++......+++|+|+|+.|++.|+++ ..++.+...|.+.+++++ ++||+|
T Consensus 38 ~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~V 117 (299)
T 3g5t_A 38 KLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKIDMI 117 (299)
T ss_dssp SEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCEEEE
T ss_pred CEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCeeEE
Confidence 7999999999999999996421236899999999999999876 457788888888888877 899999
Q ss_pred EEccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012571 285 HCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTS 318 (460)
Q Consensus 285 vs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~ 318 (460)
+++.+++++ ++..+++++.++|||||.+++.+
T Consensus 118 ~~~~~l~~~--~~~~~l~~~~~~LkpgG~l~i~~ 149 (299)
T 3g5t_A 118 TAVECAHWF--DFEKFQRSAYANLRKDGTIAIWG 149 (299)
T ss_dssp EEESCGGGS--CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eHhhHHHHh--CHHHHHHHHHHhcCCCcEEEEEe
Confidence 999876666 88899999999999999999844
No 50
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.52 E-value=6.7e-14 Score=131.53 Aligned_cols=94 Identities=23% Similarity=0.300 Sum_probs=82.4
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEccccccccccH
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKKE 297 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~d~ 297 (460)
.+|||||||+|.++..++.. +++|+++.+++.++++ .+.+...|...+++++++||+|++..++.++ +++
T Consensus 49 ~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-~~~ 118 (219)
T 1vlm_A 49 GRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR--GVFVLKGTAENLPLKDESFDFALMVTTICFV-DDP 118 (219)
T ss_dssp SCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT--TCEEEECBTTBCCSCTTCEEEEEEESCGGGS-SCH
T ss_pred CcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc--CCEEEEcccccCCCCCCCeeEEEEcchHhhc-cCH
Confidence 68999999999999988764 8999999999999888 4556666778888888999999999877776 678
Q ss_pred HHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 298 GIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 298 ~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
..+++++.++|||||++++.++..
T Consensus 119 ~~~l~~~~~~L~pgG~l~i~~~~~ 142 (219)
T 1vlm_A 119 ERALKEAYRILKKGGYLIVGIVDR 142 (219)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECS
T ss_pred HHHHHHHHHHcCCCcEEEEEEeCC
Confidence 889999999999999999998754
No 51
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.51 E-value=5.6e-14 Score=133.84 Aligned_cols=136 Identities=16% Similarity=0.066 Sum_probs=101.3
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCC-----CeEEEeecccCCCCCCCCccEEEEccccc
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGL-----PAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl-----~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~ 291 (460)
..+|||||||+|.++..+++.+ ...++++|+|+.+++.|+++.. .+.+...|...+++++++||+|++..++.
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIG 157 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGG
T ss_pred CCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhh
Confidence 3799999999999999998875 2589999999999999987732 35677778888888888999999998877
Q ss_pred ccccc-HHHHHHHHHHhcCCCcEEEEEeCCCCCCCCC--CchhhhHHHHHHHHHHHHhCeEEEeee
Q 012571 292 IWDKK-EGIFLIEADRLLKPGGYFVLTSPESKPRGSS--SSRKNKSLLKVMEEFTEKICWSLIAQQ 354 (460)
Q Consensus 292 ~~~~d-~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~--~~~e~~~~w~~i~~l~~~~~w~~~~~~ 354 (460)
|+.+. ...+++++.++|||||++++.++........ .........+.+..+.++.+|+.+...
T Consensus 158 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 223 (241)
T 2ex4_A 158 HLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEE 223 (241)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEE
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEee
Confidence 77422 3479999999999999999988644320000 000111134556777788888776543
No 52
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.51 E-value=9.8e-14 Score=128.48 Aligned_cols=101 Identities=22% Similarity=0.153 Sum_probs=84.4
Q ss_pred CeEEEeCCCCchHH-HHHHhccCceeEEEEeeCCHHHHHHHHHc----CCCeEEEeecccCCCCCCCCccEEEEcccccc
Q 012571 218 QSVLDVGCGFGSFG-AHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQLPYPSLSFDMVHCAQCGII 292 (460)
Q Consensus 218 ~~VLDIGCGtG~~a-~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~ 292 (460)
.+|||+|||+|.++ ..++..+ .+++++|+|+.+++.|+++ +..+.+...|...+++++++||+|++..+++|
T Consensus 25 ~~vLDiGcG~G~~~~~~~~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 101 (209)
T 2p8j_A 25 KTVLDCGAGGDLPPLSIFVEDG---YKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIFH 101 (209)
T ss_dssp SEEEEESCCSSSCTHHHHHHTT---CEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGGG
T ss_pred CEEEEECCCCCHHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHHh
Confidence 79999999999984 4554444 5899999999999988765 45667777788888988899999999987777
Q ss_pred cc-ccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 293 WD-KKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 293 ~~-~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
+. ++...++++++++|||||++++.++..
T Consensus 102 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 102 MRKNDVKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEEecc
Confidence 74 566789999999999999999998754
No 53
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.50 E-value=1.3e-13 Score=135.90 Aligned_cols=114 Identities=16% Similarity=0.123 Sum_probs=90.0
Q ss_pred HHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEee
Q 012571 196 YSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNF 269 (460)
Q Consensus 196 ~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~ 269 (460)
.++.+.+.+...++ .+|||||||+|.++..+++... .+++|+|+|+.+++.|+++ ++ .+.+...
T Consensus 60 ~~~~~~~~~~~~~~--------~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~ 129 (302)
T 3hem_A 60 KRKLALDKLNLEPG--------MTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ 129 (302)
T ss_dssp HHHHHHHTTCCCTT--------CEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEEC
T ss_pred HHHHHHHHcCCCCc--------CEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC
Confidence 44445555544443 7999999999999999998832 5899999999999999876 44 3667777
Q ss_pred cccCCCCCCCCccEEEEccccccccc--------cHHHHHHHHHHhcCCCcEEEEEeCCCC
Q 012571 270 ISRQLPYPSLSFDMVHCAQCGIIWDK--------KEGIFLIEADRLLKPGGYFVLTSPESK 322 (460)
Q Consensus 270 d~~~Lp~~~~sFDlVvs~~~l~~~~~--------d~~~~L~ei~RvLkPGG~lvl~~~~~~ 322 (460)
|..++ +++||+|++..+++|+.+ +...+++++.++|||||++++.+....
T Consensus 130 d~~~~---~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 130 GWEEF---DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp CGGGC---CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECC
T ss_pred CHHHc---CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEecc
Confidence 77665 789999999988777732 225799999999999999999987543
No 54
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.50 E-value=5.8e-13 Score=120.95 Aligned_cols=123 Identities=18% Similarity=0.103 Sum_probs=98.4
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEc-ccccccc-c
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCA-QCGIIWD-K 295 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~-~~l~~~~-~ 295 (460)
.+|||||||+|.++..+++.+ .+++++|+++.+++.++++...+.+...|...+++++++||+|++. .++.+.. +
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~~~ 124 (195)
T 3cgg_A 48 AKILDAGCGQGRIGGYLSKQG---HDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFLAED 124 (195)
T ss_dssp CEEEEETCTTTHHHHHHHHTT---CEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSCHH
T ss_pred CeEEEECCCCCHHHHHHHHCC---CcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhcChH
Confidence 789999999999999999885 5899999999999999988666777778888888888999999998 4444443 3
Q ss_pred cHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEEEee
Q 012571 296 KEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQ 353 (460)
Q Consensus 296 d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~~~~ 353 (460)
+...+++++.++|||||.+++..+..... ....+..+.++.+|++...
T Consensus 125 ~~~~~l~~~~~~l~~~G~l~~~~~~~~~~----------~~~~~~~~l~~~Gf~~~~~ 172 (195)
T 3cgg_A 125 GREPALANIHRALGADGRAVIGFGAGRGW----------VFGDFLEVAERVGLELENA 172 (195)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEETTSSC----------CHHHHHHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHHHhCCCCEEEEEeCCCCCc----------CHHHHHHHHHHcCCEEeee
Confidence 44679999999999999999988654221 1344566777888887554
No 55
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.49 E-value=1.4e-13 Score=130.03 Aligned_cols=116 Identities=18% Similarity=0.214 Sum_probs=92.8
Q ss_pred HHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCCeEEEeec
Q 012571 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFI 270 (460)
Q Consensus 195 ~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~~~~~~~d 270 (460)
.+.+.+.+.+..... ...+|||||||+|.++..+++.+ .+++++|+|+.+++.|+++ +..+.+...|
T Consensus 22 ~~~~~~~~~l~~~~~------~~~~vLdiG~G~G~~~~~l~~~~---~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d 92 (246)
T 1y8c_A 22 KWSDFIIEKCVENNL------VFDDYLDLACGTGNLTENLCPKF---KNTWAVDLSQEMLSEAENKFRSQGLKPRLACQD 92 (246)
T ss_dssp HHHHHHHHHHHTTTC------CTTEEEEETCTTSTTHHHHGGGS---SEEEEECSCHHHHHHHHHHHHHTTCCCEEECCC
T ss_pred HHHHHHHHHHHHhCC------CCCeEEEeCCCCCHHHHHHHHCC---CcEEEEECCHHHHHHHHHHHhhcCCCeEEEecc
Confidence 345555555543311 23799999999999999999885 4799999999999998776 4467778888
Q ss_pred ccCCCCCCCCccEEEEcc-cccccc--ccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 271 SRQLPYPSLSFDMVHCAQ-CGIIWD--KKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 271 ~~~Lp~~~~sFDlVvs~~-~l~~~~--~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
...++++ ++||+|++.. +++|+. ++...+++++.++|||||++++..+.
T Consensus 93 ~~~~~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 93 ISNLNIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp GGGCCCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred cccCCcc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 8888876 8999999997 777773 45678999999999999999997764
No 56
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.49 E-value=1.8e-13 Score=128.19 Aligned_cols=100 Identities=23% Similarity=0.304 Sum_probs=85.3
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCCeEEEeecccCCCCCCCCccEEEEccccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIW 293 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~ 293 (460)
.+|||+|||+|.++..+++.+. +++++|+|+.+++.|+++ +..+.+...|...+++++++||+|++..+++++
T Consensus 40 ~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~ 116 (227)
T 1ve3_A 40 GKVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHF 116 (227)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGGC
T ss_pred CeEEEEeccCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHhC
Confidence 7899999999999999998864 899999999999998765 356778888888888888999999999763333
Q ss_pred -cccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 294 -DKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 294 -~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
..+...+++++.++|||||.+++.++.
T Consensus 117 ~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 117 EPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 256678999999999999999999874
No 57
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.49 E-value=3.9e-14 Score=139.32 Aligned_cols=102 Identities=18% Similarity=0.094 Sum_probs=77.1
Q ss_pred CCeEEEeCCCCchHHHHH----HhccCcee--EEEEeeCCHHHHHHHHHc-----CC---CeEEEeecccCCC------C
Q 012571 217 VQSVLDVGCGFGSFGAHL----VSLKLMAV--CVAVYEATGSQVQLALER-----GL---PAMIGNFISRQLP------Y 276 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~L----a~~g~~~~--~v~giD~s~~~l~~A~~r-----gl---~~~~~~~d~~~Lp------~ 276 (460)
..+|||||||+|.++..+ +.++.. . .++++|+|++|++.|+++ ++ .+.+.+.+.+.++ +
T Consensus 53 ~~~VLDiG~GtG~~~~~~l~~l~~~~~~-~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (292)
T 2aot_A 53 EIKILSIGGGAGEIDLQILSKVQAQYPG-VCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKK 131 (292)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHSTT-CEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTT
T ss_pred CCeEEEEcCCCCHHHHHHHHHHHhhCCC-ceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcccc
Confidence 368999999999766543 333222 3 449999999999998875 22 2334455444443 5
Q ss_pred CCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 277 PSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 277 ~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
++++||+|++..+++|+ +|+..+|++++|+|||||++++....
T Consensus 132 ~~~~fD~V~~~~~l~~~-~d~~~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 132 ELQKWDFIHMIQMLYYV-KDIPATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp CCCCEEEEEEESCGGGC-SCHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred CCCceeEEEEeeeeeec-CCHHHHHHHHHHHcCCCcEEEEEEec
Confidence 68999999999977776 78889999999999999999998754
No 58
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.49 E-value=6.4e-14 Score=133.30 Aligned_cols=115 Identities=17% Similarity=0.143 Sum_probs=88.0
Q ss_pred hhHHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCCeEEEe
Q 012571 193 VKDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGN 268 (460)
Q Consensus 193 ~~~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~~~~~~ 268 (460)
...+.+.+.+.+. ..+ .+|||||||+|.++..+++.+. .+++++|+|+.|++.|+++ +.++.+..
T Consensus 46 ~~~~~~~l~~~~~-~~~--------~~vLDiGcGtG~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~ 114 (236)
T 1zx0_A 46 ETPYMHALAAAAS-SKG--------GRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQTHKVIPLK 114 (236)
T ss_dssp GHHHHHHHHHHHT-TTC--------EEEEEECCTTSHHHHHHHTSCE--EEEEEEECCHHHHHHHHHHGGGCSSEEEEEE
T ss_pred HHHHHHHHHhhcC-CCC--------CeEEEEeccCCHHHHHHHhcCC--CeEEEEcCCHHHHHHHHHHHHhcCCCeEEEe
Confidence 3455566665543 222 6899999999999999977643 4899999999999999876 34567777
Q ss_pred ecccCC--CCCCCCccEEEE-cccccccc----ccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 269 FISRQL--PYPSLSFDMVHC-AQCGIIWD----KKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 269 ~d~~~L--p~~~~sFDlVvs-~~~l~~~~----~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
+|..++ ++++++||+|++ .+.+ +.. .+...++++++|+|||||+|++.+.
T Consensus 115 ~d~~~~~~~~~~~~fD~V~~d~~~~-~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 115 GLWEDVAPTLPDGHFDGILYDTYPL-SEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp SCHHHHGGGSCTTCEEEEEECCCCC-BGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred cCHHHhhcccCCCceEEEEECCccc-chhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 777777 888999999999 5443 221 2334679999999999999998764
No 59
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.48 E-value=6.9e-14 Score=133.91 Aligned_cols=113 Identities=18% Similarity=0.148 Sum_probs=85.6
Q ss_pred hHHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCCeEEEee
Q 012571 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNF 269 (460)
Q Consensus 194 ~~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~~~~~~~ 269 (460)
..+.+.+++.+.. .+ .+|||||||+|..+..+++..+ .+++++|+|+.|++.|+++ +..+.+...
T Consensus 47 ~~~m~~~a~~~~~-~G--------~rVLdiG~G~G~~~~~~~~~~~--~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~ 115 (236)
T 3orh_A 47 TPYMHALAAAASS-KG--------GRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKG 115 (236)
T ss_dssp HHHHHHHHHHHTT-TC--------EEEEEECCTTSHHHHHHTTSCE--EEEEEEECCHHHHHHHHHHGGGCSSEEEEEES
T ss_pred HHHHHHHHHhhcc-CC--------CeEEEECCCccHHHHHHHHhCC--cEEEEEeCCHHHHHHHHHHHhhCCCceEEEee
Confidence 4566666666653 23 6999999999999999988753 5789999999999999876 444555555
Q ss_pred cccC--CCCCCCCccEEEE-----ccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012571 270 ISRQ--LPYPSLSFDMVHC-----AQCGIIWDKKEGIFLIEADRLLKPGGYFVLTS 318 (460)
Q Consensus 270 d~~~--Lp~~~~sFDlVvs-----~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~ 318 (460)
+.+. .++++++||.|+. .....|. .+...++++++|+|||||+|.+..
T Consensus 116 ~a~~~~~~~~~~~FD~i~~D~~~~~~~~~~~-~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 116 LWEDVAPTLPDGHFDGILYDTYPLSEETWHT-HQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CHHHHGGGSCTTCEEEEEECCCCCBGGGTTT-HHHHHHHHTHHHHEEEEEEEEECC
T ss_pred hHHhhcccccccCCceEEEeeeecccchhhh-cchhhhhhhhhheeCCCCEEEEEe
Confidence 5443 3577899999975 3333344 567789999999999999998864
No 60
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.48 E-value=3.9e-13 Score=131.27 Aligned_cols=99 Identities=16% Similarity=0.242 Sum_probs=84.9
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCCeEEEeecccCCCCCCCCccEEEEccccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIW 293 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~ 293 (460)
.+|||+|||+|.++..+++.+ .+++|+|+|+.+++.|+++ ++.+.+...|...+++ +++||+|+++.+++|+
T Consensus 122 ~~vLD~GcG~G~~~~~l~~~g---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~~ 197 (286)
T 3m70_A 122 CKVLDLGCGQGRNSLYLSLLG---YDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDFIVSTVVFMFL 197 (286)
T ss_dssp CEEEEESCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSSGGGS
T ss_pred CcEEEECCCCCHHHHHHHHCC---CeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccEEEEccchhhC
Confidence 789999999999999999986 4899999999999988765 5578888888888877 7899999999877776
Q ss_pred c-ccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 294 D-KKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 294 ~-~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
. ++...+++++.++|||||.+++....
T Consensus 198 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 225 (286)
T 3m70_A 198 NRERVPSIIKNMKEHTNVGGYNLIVAAM 225 (286)
T ss_dssp CGGGHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 4 34557999999999999998876553
No 61
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.47 E-value=4e-13 Score=132.86 Aligned_cols=102 Identities=18% Similarity=0.094 Sum_probs=84.8
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCC--eEEEeecccCCCCCCCCccEEEEccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP--AMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~--~~~~~~d~~~Lp~~~~sFDlVvs~~~l~ 291 (460)
.+|||||||+|.++..++.......+++++|+|+.+++.|+++ ++. +.+...|...++++ ++||+|++..+++
T Consensus 120 ~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~ 198 (305)
T 3ocj_A 120 CVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSNGLNI 198 (305)
T ss_dssp CEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECCSSGG
T ss_pred CEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEECChhh
Confidence 7899999999999999863323347899999999999999876 222 77888888889887 9999999998777
Q ss_pred cccccHH---HHHHHHHHhcCCCcEEEEEeCCC
Q 012571 292 IWDKKEG---IFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 292 ~~~~d~~---~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
|+. ++. .+++++.++|||||++++.+...
T Consensus 199 ~~~-~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 199 YEP-DDARVTELYRRFWQALKPGGALVTSFLTP 230 (305)
T ss_dssp GCC-CHHHHHHHHHHHHHHEEEEEEEEEECCCC
T ss_pred hcC-CHHHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 774 444 37999999999999999998654
No 62
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.47 E-value=1.4e-13 Score=127.40 Aligned_cols=102 Identities=23% Similarity=0.241 Sum_probs=85.8
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcC---CCeEEEeecccCCCCCCCCccEEEEcccccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---LPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWD 294 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rg---l~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~ 294 (460)
.+|||+|||+|.++..+++.+. ..++++|+++.+++.|+++. ..+.+...|...+++++++||+|++..++.+..
T Consensus 44 ~~vLdiGcG~G~~~~~l~~~~~--~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~ 121 (215)
T 2pxx_A 44 DRILVLGCGNSALSYELFLGGF--PNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLDALL 121 (215)
T ss_dssp CCEEEETCTTCSHHHHHHHTTC--CCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHHHHT
T ss_pred CeEEEECCCCcHHHHHHHHcCC--CcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchhhhc
Confidence 6899999999999999999864 27999999999999998773 356777778888888889999999987654432
Q ss_pred --------------ccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 295 --------------KKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 295 --------------~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
.+...+++++.++|||||.+++.++..
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 122 AGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp TTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred cccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 345679999999999999999999853
No 63
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.47 E-value=3.3e-13 Score=133.92 Aligned_cols=100 Identities=15% Similarity=0.119 Sum_probs=84.7
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccCCCCCCCCccEEEEccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~ 291 (460)
.+|||||||+|.++..+++.. ..+++|+|+|+.+++.|+++ ++ .+.+...|..+++ ++||+|++..+++
T Consensus 92 ~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~fD~v~~~~~l~ 166 (318)
T 2fk8_A 92 MTLLDIGCGWGTTMRRAVERF--DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA---EPVDRIVSIEAFE 166 (318)
T ss_dssp CEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---CCCSEEEEESCGG
T ss_pred CEEEEEcccchHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---CCcCEEEEeChHH
Confidence 799999999999999999872 25899999999999999876 33 3667777777764 7899999999877
Q ss_pred ccc-ccHHHHHHHHHHhcCCCcEEEEEeCCCC
Q 012571 292 IWD-KKEGIFLIEADRLLKPGGYFVLTSPESK 322 (460)
Q Consensus 292 ~~~-~d~~~~L~ei~RvLkPGG~lvl~~~~~~ 322 (460)
|+. ++...+++++.++|||||++++.++...
T Consensus 167 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 198 (318)
T 2fk8_A 167 HFGHENYDDFFKRCFNIMPADGRMTVQSSVSY 198 (318)
T ss_dssp GTCGGGHHHHHHHHHHHSCTTCEEEEEEEECC
T ss_pred hcCHHHHHHHHHHHHHhcCCCcEEEEEEeccC
Confidence 775 4677899999999999999999988653
No 64
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.47 E-value=2.6e-13 Score=125.23 Aligned_cols=99 Identities=16% Similarity=0.131 Sum_probs=85.2
Q ss_pred eEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCCeEEEeecccCCCCCCCCccEEEEcccccccc
Q 012571 219 SVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWD 294 (460)
Q Consensus 219 ~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~ 294 (460)
+|||||||+|.++..+++.+ .+++++|+|+.+++.|+++ +..+.+...|...+++++++||+|+++. .|+.
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~--~~~~ 106 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLG---YEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIF--CHLP 106 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTT---CEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEEC--CCCC
T ss_pred CEEEECCCCCHhHHHHHhCC---CeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEh--hcCC
Confidence 89999999999999999885 4899999999999998776 5677888888888888889999999964 3443
Q ss_pred -ccHHHHHHHHHHhcCCCcEEEEEeCCCC
Q 012571 295 -KKEGIFLIEADRLLKPGGYFVLTSPESK 322 (460)
Q Consensus 295 -~d~~~~L~ei~RvLkPGG~lvl~~~~~~ 322 (460)
++...+++++.++|||||++++.++...
T Consensus 107 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 135 (202)
T 2kw5_A 107 SSLRQQLYPKVYQGLKPGGVFILEGFAPE 135 (202)
T ss_dssp HHHHHHHHHHHHTTCCSSEEEEEEEECTT
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEeccc
Confidence 4667899999999999999999987653
No 65
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.46 E-value=5.5e-13 Score=121.52 Aligned_cols=101 Identities=15% Similarity=0.048 Sum_probs=76.4
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEeecccCCC-CCCCCccEEEEccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQLP-YPSLSFDMVHCAQCGI 291 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl-~~~~~~~d~~~Lp-~~~~sFDlVvs~~~l~ 291 (460)
.+|||+|||+|.++..+++++ .+|+|+|+|+.|++.|+++ ++ ++.+...+...++ +.+++||+|+++...+
T Consensus 24 ~~vLDiGcG~G~~~~~la~~~---~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~ 100 (185)
T 3mti_A 24 SIVVDATMGNGNDTAFLAGLS---KKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGYL 100 (185)
T ss_dssp CEEEESCCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC--
T ss_pred CEEEEEcCCCCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCCC
Confidence 789999999999999999883 6899999999999998775 43 4566655555543 4578899999873222
Q ss_pred cc--------cccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 292 IW--------DKKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 292 ~~--------~~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
+. ..+...+++++.++|||||++++.....
T Consensus 101 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 138 (185)
T 3mti_A 101 PSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYG 138 (185)
T ss_dssp ---------CHHHHHHHHHHHHHHEEEEEEEEEEEC--
T ss_pred CCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Confidence 21 1334468999999999999999987643
No 66
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.46 E-value=4.2e-13 Score=126.63 Aligned_cols=100 Identities=22% Similarity=0.150 Sum_probs=84.7
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEcc-cccccc--
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQ-CGIIWD-- 294 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~-~l~~~~-- 294 (460)
.+|||||||+|.++..+++.+. +++++|+|+.+++.|+++...+.+...|...+++ +++||+|+|.. ++.|..
T Consensus 42 ~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~~~ 117 (239)
T 3bxo_A 42 SSLLDVACGTGTHLEHFTKEFG---DTAGLELSEDMLTHARKRLPDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYLKTT 117 (239)
T ss_dssp CEEEEETCTTSHHHHHHHHHHS---EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCC-SSCEEEEEECTTGGGGCCSH
T ss_pred CeEEEecccCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHccc-CCCCcEEEEcCchHhhcCCH
Confidence 7899999999999999998863 7999999999999999886667777788888877 78999999755 555553
Q ss_pred ccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 295 KKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 295 ~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
++...++++++++|||||.+++.++..
T Consensus 118 ~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 118 EELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 455679999999999999999987654
No 67
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.46 E-value=1.8e-13 Score=127.86 Aligned_cols=99 Identities=21% Similarity=0.206 Sum_probs=84.0
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccC--CCCCCCCccEEEEcccccccc
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQ--LPYPSLSFDMVHCAQCGIIWD 294 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~--Lp~~~~sFDlVvs~~~l~~~~ 294 (460)
..+|||||||+|.++..+++.+ .+++++|+++.+++.++++.. .+...|... +++++++||+|++..+++|+
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~~---~~~~~~D~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~- 106 (230)
T 3cc8_A 33 WKEVLDIGCSSGALGAAIKENG---TRVSGIEAFPEAAEQAKEKLD--HVVLGDIETMDMPYEEEQFDCVIFGDVLEHL- 106 (230)
T ss_dssp CSEEEEETCTTSHHHHHHHTTT---CEEEEEESSHHHHHHHHTTSS--EEEESCTTTCCCCSCTTCEEEEEEESCGGGS-
T ss_pred CCcEEEeCCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHHhCC--cEEEcchhhcCCCCCCCccCEEEECChhhhc-
Confidence 3799999999999999999884 689999999999999987654 344445544 67788999999999877777
Q ss_pred ccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 295 KKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 295 ~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
+++..+++++.++|||||++++..+..
T Consensus 107 ~~~~~~l~~~~~~L~~gG~l~~~~~~~ 133 (230)
T 3cc8_A 107 FDPWAVIEKVKPYIKQNGVILASIPNV 133 (230)
T ss_dssp SCHHHHHHHTGGGEEEEEEEEEEEECT
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 577889999999999999999998754
No 68
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.46 E-value=2.6e-13 Score=133.62 Aligned_cols=101 Identities=19% Similarity=0.172 Sum_probs=85.7
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----C----CCeEEEeecccCCCCCCCCccEEEEccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----G----LPAMIGNFISRQLPYPSLSFDMVHCAQC 289 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----g----l~~~~~~~d~~~Lp~~~~sFDlVvs~~~ 289 (460)
.+|||||||+|.++..+++.+ .+++++|+|+.+++.|+++ + .++.+..+|...+++ +++||+|++...
T Consensus 84 ~~vLDlGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~ 159 (299)
T 3g2m_A 84 GPVLELAAGMGRLTFPFLDLG---WEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSG 159 (299)
T ss_dssp SCEEEETCTTTTTHHHHHTTT---CCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHH
T ss_pred CcEEEEeccCCHHHHHHHHcC---CeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-CCCcCEEEECCc
Confidence 489999999999999999986 5799999999999999876 2 457888888888887 789999998755
Q ss_pred cccccc--cHHHHHHHHHHhcCCCcEEEEEeCCCC
Q 012571 290 GIIWDK--KEGIFLIEADRLLKPGGYFVLTSPESK 322 (460)
Q Consensus 290 l~~~~~--d~~~~L~ei~RvLkPGG~lvl~~~~~~ 322 (460)
++++.+ +...+|++++++|||||+|++..+...
T Consensus 160 ~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 194 (299)
T 3g2m_A 160 SINELDEADRRGLYASVREHLEPGGKFLLSLAMSE 194 (299)
T ss_dssp HHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCH
T ss_pred ccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCc
Confidence 566543 346799999999999999999988653
No 69
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.45 E-value=2.3e-12 Score=116.83 Aligned_cols=114 Identities=17% Similarity=0.209 Sum_probs=90.2
Q ss_pred HHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCC---eEEE
Q 012571 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP---AMIG 267 (460)
Q Consensus 195 ~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~---~~~~ 267 (460)
...+.+.+.+....+ .+|||+|||+|.++..+++.+ ..++++|+++.+++.|+++ ++. +.+.
T Consensus 39 ~~~~~l~~~~~~~~~--------~~vLdiG~G~G~~~~~~~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~ 107 (194)
T 1dus_A 39 KGTKILVENVVVDKD--------DDILDLGCGYGVIGIALADEV---KSTTMADINRRAIKLAKENIKLNNLDNYDIRVV 107 (194)
T ss_dssp HHHHHHHHHCCCCTT--------CEEEEETCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEE
T ss_pred hHHHHHHHHcccCCC--------CeEEEeCCCCCHHHHHHHHcC---CeEEEEECCHHHHHHHHHHHHHcCCCccceEEE
Confidence 456666776665443 799999999999999999873 6899999999999998776 443 6777
Q ss_pred eecccCCCCCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 268 NFISRQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 268 ~~d~~~Lp~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
..|... ++++++||+|++...+++..++...+++++.++|||||.+++..+.
T Consensus 108 ~~d~~~-~~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 159 (194)
T 1dus_A 108 HSDLYE-NVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQT 159 (194)
T ss_dssp ECSTTT-TCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred ECchhc-ccccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECC
Confidence 776655 3457799999998654432356678999999999999999999874
No 70
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.45 E-value=1.5e-13 Score=136.74 Aligned_cols=102 Identities=11% Similarity=0.052 Sum_probs=77.2
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCC-------eEEEeecc------cCC--CCC
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP-------AMIGNFIS------RQL--PYP 277 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~-------~~~~~~d~------~~L--p~~ 277 (460)
..+|||||||+|..+..++..+. ..|+|+|+|+.|++.|+++ +.. +.+...+. +.+ +++
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~~~--~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYGEI--ALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCeEEEEecCCcHhHHHHHhcCC--CeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 37899999999987766666543 5899999999999999876 322 33444443 222 356
Q ss_pred CCCccEEEEcccccccc--ccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 278 SLSFDMVHCAQCGIIWD--KKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 278 ~~sFDlVvs~~~l~~~~--~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
+++||+|+|.+++++.. .+...++++++|+|||||+|+++++.
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 78999999998655431 34568999999999999999999885
No 71
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.45 E-value=7.3e-13 Score=128.12 Aligned_cols=119 Identities=15% Similarity=0.116 Sum_probs=91.2
Q ss_pred HHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHH------HHHHHHHc----CC--
Q 012571 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGS------QVQLALER----GL-- 262 (460)
Q Consensus 195 ~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~------~l~~A~~r----gl-- 262 (460)
.....+.+.+...++ .+|||||||+|.++..++++.....+++|+|+|+. +++.|+++ ++
T Consensus 30 ~~~~~l~~~~~~~~~--------~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~ 101 (275)
T 3bkx_A 30 AHRLAIAEAWQVKPG--------EKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGD 101 (275)
T ss_dssp HHHHHHHHHHTCCTT--------CEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGG
T ss_pred HHHHHHHHHcCCCCC--------CEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCC
Confidence 345556666665554 79999999999999999988422358999999997 88888765 22
Q ss_pred CeEEEeec---ccCCCCCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCC
Q 012571 263 PAMIGNFI---SRQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPESK 322 (460)
Q Consensus 263 ~~~~~~~d---~~~Lp~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~~ 322 (460)
.+.+...| ...+|+++++||+|++..+++|+ +++..+++.+.++++|||++++.+....
T Consensus 102 ~v~~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~-~~~~~~~~~~~~l~~~gG~l~~~~~~~~ 163 (275)
T 3bkx_A 102 RLTVHFNTNLSDDLGPIADQHFDRVVLAHSLWYF-ASANALALLFKNMAAVCDHVDVAEWSMQ 163 (275)
T ss_dssp GEEEECSCCTTTCCGGGTTCCCSEEEEESCGGGS-SCHHHHHHHHHHHTTTCSEEEEEEECSS
T ss_pred ceEEEECChhhhccCCCCCCCEEEEEEccchhhC-CCHHHHHHHHHHHhCCCCEEEEEEecCC
Confidence 46666666 55667788999999999887777 5666677777777788999999987653
No 72
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.44 E-value=5.8e-13 Score=127.14 Aligned_cols=99 Identities=21% Similarity=0.263 Sum_probs=82.1
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCCeEEEeecccCCCCCCCCccEEEEccccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIW 293 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~ 293 (460)
.+|||+|||+|.++..+++.+ .+++|+|+|+.|++.|+++ +..+.+...|...++++ ++||+|++.....++
T Consensus 43 ~~vLDlGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~ 118 (252)
T 1wzn_A 43 RRVLDLACGTGIPTLELAERG---YEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTIMY 118 (252)
T ss_dssp CEEEEETCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGGGG
T ss_pred CEEEEeCCCCCHHHHHHHHCC---CeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccC-CCccEEEEcCCchhc
Confidence 799999999999999999886 5899999999999998765 55677888888888764 689999987544433
Q ss_pred c--ccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 294 D--KKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 294 ~--~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
. ++...+++++.++|||||.+++..+.
T Consensus 119 ~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 119 FDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 2 35567999999999999999987764
No 73
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.44 E-value=4.8e-13 Score=130.65 Aligned_cols=113 Identities=9% Similarity=-0.052 Sum_probs=86.0
Q ss_pred HHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCC
Q 012571 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQL 274 (460)
Q Consensus 195 ~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~L 274 (460)
...+.+.+.+....+ .+|||||||+|.++..|++++ .+|+++|+|+.|++.|+++.... ....+...+
T Consensus 32 ~~~~~il~~l~l~~g--------~~VLDlGcGtG~~a~~La~~g---~~V~gvD~S~~ml~~Ar~~~~~~-~v~~~~~~~ 99 (261)
T 3iv6_A 32 SDRENDIFLENIVPG--------STVAVIGASTRFLIEKALERG---ASVTVFDFSQRMCDDLAEALADR-CVTIDLLDI 99 (261)
T ss_dssp CHHHHHHHTTTCCTT--------CEEEEECTTCHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTSSS-CCEEEECCT
T ss_pred HHHHHHHHhcCCCCc--------CEEEEEeCcchHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHhc-cceeeeeec
Confidence 355566666655544 799999999999999999986 58999999999999998873221 222233333
Q ss_pred CC-----CCCCccEEEEcccccccc-ccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 275 PY-----PSLSFDMVHCAQCGIIWD-KKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 275 p~-----~~~sFDlVvs~~~l~~~~-~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
+. .+++||+|+++.+++|+. ++...+++++.++| |||.++++...
T Consensus 100 ~~~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 100 TAEIPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp TSCCCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred ccccccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 32 257899999998777774 45567999999999 99999999764
No 74
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.43 E-value=7.3e-12 Score=116.08 Aligned_cols=132 Identities=17% Similarity=0.084 Sum_probs=98.5
Q ss_pred HHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEeec
Q 012571 196 YSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFI 270 (460)
Q Consensus 196 ~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl-~~~~~~~d 270 (460)
....+.+.+....+ .+|||+|||+|.++..+++.+. ..+++++|+++.+++.|+++ ++ .+.+...|
T Consensus 28 i~~~~l~~l~~~~~--------~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d 98 (204)
T 3e05_A 28 VRAVTLSKLRLQDD--------LVMWDIGAGSASVSIEASNLMP-NGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAF 98 (204)
T ss_dssp HHHHHHHHTTCCTT--------CEEEEETCTTCHHHHHHHHHCT-TSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECC
T ss_pred HHHHHHHHcCCCCC--------CEEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCC
Confidence 34455566655544 7999999999999999999853 36899999999999998765 43 46676666
Q ss_pred ccCCCCCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEE
Q 012571 271 SRQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSL 350 (460)
Q Consensus 271 ~~~Lp~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~ 350 (460)
........++||+|++..... +...+++++.++|||||++++.... ....+.+..+.++.+|..
T Consensus 99 ~~~~~~~~~~~D~i~~~~~~~----~~~~~l~~~~~~LkpgG~l~~~~~~------------~~~~~~~~~~l~~~g~~~ 162 (204)
T 3e05_A 99 APEGLDDLPDPDRVFIGGSGG----MLEEIIDAVDRRLKSEGVIVLNAVT------------LDTLTKAVEFLEDHGYMV 162 (204)
T ss_dssp TTTTCTTSCCCSEEEESCCTT----CHHHHHHHHHHHCCTTCEEEEEECB------------HHHHHHHHHHHHHTTCEE
T ss_pred hhhhhhcCCCCCEEEECCCCc----CHHHHHHHHHHhcCCCeEEEEEecc------------cccHHHHHHHHHHCCCce
Confidence 654433347899999986432 6668999999999999999998763 134455666777888844
Q ss_pred Ee
Q 012571 351 IA 352 (460)
Q Consensus 351 ~~ 352 (460)
..
T Consensus 163 ~~ 164 (204)
T 3e05_A 163 EV 164 (204)
T ss_dssp EE
T ss_pred eE
Confidence 33
No 75
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.43 E-value=7.3e-13 Score=129.11 Aligned_cols=101 Identities=23% Similarity=0.220 Sum_probs=84.9
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccCCCC-CCCCccEEEEcccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPY-PSLSFDMVHCAQCG 290 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~Lp~-~~~sFDlVvs~~~l 290 (460)
.+|||||||+|.++..+++.+. ..++|+|+|+.+++.|+++ +. .+.+...|...+++ ++++||+|++..++
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l 143 (298)
T 1ri5_A 66 DSVLDLGCGKGGDLLKYERAGI--GEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFSF 143 (298)
T ss_dssp CEEEEETCTTTTTHHHHHHHTC--SEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESCG
T ss_pred CeEEEECCCCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECchh
Confidence 7999999999999999888753 4899999999999999876 22 36777788888887 68899999999876
Q ss_pred ccc---cccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 291 IIW---DKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 291 ~~~---~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
++. .++...+++++.++|||||++++..+.
T Consensus 144 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 144 HYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp GGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 552 256678999999999999999999874
No 76
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.42 E-value=1.3e-12 Score=119.88 Aligned_cols=103 Identities=17% Similarity=0.125 Sum_probs=82.4
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEeecccCCC--CCCCCccEEEEcccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQLP--YPSLSFDMVHCAQCG 290 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl-~~~~~~~d~~~Lp--~~~~sFDlVvs~~~l 290 (460)
.+|||+|||+|.++..+++++. ..++++|+++.+++.|+++ ++ .+.+...|..+++ +++++||+|++....
T Consensus 46 ~~vLDlgcG~G~~~~~~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~ 123 (189)
T 3p9n_A 46 LAVLDLYAGSGALGLEALSRGA--ASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPY 123 (189)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC--SEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCCT
T ss_pred CEEEEeCCCcCHHHHHHHHCCC--CeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCCC
Confidence 7899999999999998888753 5799999999999998775 43 5677777766553 457899999998643
Q ss_pred ccccccHHHHHHHHHH--hcCCCcEEEEEeCCCC
Q 012571 291 IIWDKKEGIFLIEADR--LLKPGGYFVLTSPESK 322 (460)
Q Consensus 291 ~~~~~d~~~~L~ei~R--vLkPGG~lvl~~~~~~ 322 (460)
.+..++...++.++.+ +|||||.+++..+...
T Consensus 124 ~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 124 NVDSADVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp TSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred CcchhhHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 3333567789999999 9999999999887543
No 77
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.41 E-value=1.4e-13 Score=133.47 Aligned_cols=134 Identities=14% Similarity=0.037 Sum_probs=91.0
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc------CC----------------------------C
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER------GL----------------------------P 263 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r------gl----------------------------~ 263 (460)
.+|||||||+|.++..++..+. .+|+|+|+|+.|++.|+++ +. .
T Consensus 57 ~~vLDiGCG~G~~~~~~~~~~~--~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (263)
T 2a14_A 57 DTLIDIGSGPTIYQVLAACDSF--QDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAA 134 (263)
T ss_dssp EEEEESSCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHH
T ss_pred ceEEEeCCCccHHHHHHHHhhh--cceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhh
Confidence 7899999999998887777653 4799999999999988753 10 0
Q ss_pred eE-EEeecccC-CCC---CCCCccEEEEcccccccc---ccHHHHHHHHHHhcCCCcEEEEEeCCCCCC---CCCCchhh
Q 012571 264 AM-IGNFISRQ-LPY---PSLSFDMVHCAQCGIIWD---KKEGIFLIEADRLLKPGGYFVLTSPESKPR---GSSSSRKN 332 (460)
Q Consensus 264 ~~-~~~~d~~~-Lp~---~~~sFDlVvs~~~l~~~~---~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~---~~~~~~e~ 332 (460)
+. +...|... .|+ ..++||+|+++.++++.. ++...++++++|+|||||+|++++...... +.......
T Consensus 135 i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~~ 214 (263)
T 2a14_A 135 VKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCV 214 (263)
T ss_dssp EEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECC
T ss_pred hheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeecc
Confidence 11 45555555 343 357999999999887753 345679999999999999999997532210 00000000
Q ss_pred hHHHHHHHHHHHHhCeEEEee
Q 012571 333 KSLLKVMEEFTEKICWSLIAQ 353 (460)
Q Consensus 333 ~~~w~~i~~l~~~~~w~~~~~ 353 (460)
.-.-+.+..+.++.+|+++..
T Consensus 215 ~~~~~~l~~~l~~aGF~i~~~ 235 (263)
T 2a14_A 215 ALEKGEVEQAVLDAGFDIEQL 235 (263)
T ss_dssp CCCHHHHHHHHHHTTEEEEEE
T ss_pred ccCHHHHHHHHHHCCCEEEEE
Confidence 012335666777788877554
No 78
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.41 E-value=2.9e-12 Score=121.08 Aligned_cols=115 Identities=19% Similarity=0.348 Sum_probs=91.0
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecc-cCCCCC-CCCccEEEEccccccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFIS-RQLPYP-SLSFDMVHCAQCGIIWDK 295 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~-~~Lp~~-~~sFDlVvs~~~l~~~~~ 295 (460)
.+|||||||+|.++..+++.+ .+++++|+|+.+++.|+++...+.+...|. ..+|++ +++||+|+++ .
T Consensus 50 ~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~-------~ 119 (226)
T 3m33_A 50 TRVLEAGCGHGPDAARFGPQA---ARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR-------R 119 (226)
T ss_dssp CEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE-------S
T ss_pred CeEEEeCCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC-------C
Confidence 789999999999999999985 589999999999999998866777877777 678888 8999999987 2
Q ss_pred cHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEEEeeec
Q 012571 296 KEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQQD 355 (460)
Q Consensus 296 d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~~~~~~ 355 (460)
+...+++++.++|||||.++....... ...+....++.+|+......
T Consensus 120 ~~~~~l~~~~~~LkpgG~l~~~~~~~~-------------~~~~~~~l~~~Gf~~~~~~~ 166 (226)
T 3m33_A 120 GPTSVILRLPELAAPDAHFLYVGPRLN-------------VPEVPERLAAVGWDIVAEDH 166 (226)
T ss_dssp CCSGGGGGHHHHEEEEEEEEEEESSSC-------------CTHHHHHHHHTTCEEEEEEE
T ss_pred CHHHHHHHHHHHcCCCcEEEEeCCcCC-------------HHHHHHHHHHCCCeEEEEEe
Confidence 455689999999999999993322111 12345566777887765443
No 79
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.41 E-value=5.3e-12 Score=113.59 Aligned_cols=129 Identities=12% Similarity=0.089 Sum_probs=91.5
Q ss_pred HHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCC--eEEEee
Q 012571 196 YSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP--AMIGNF 269 (460)
Q Consensus 196 ~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~--~~~~~~ 269 (460)
....+.+.+....+ .+|||+|||+|.++..+++.. ...+++++|+++.+++.|+++ +.. + +...
T Consensus 13 ~~~~~~~~~~~~~~--------~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~ 82 (178)
T 3hm2_A 13 VRALAISALAPKPH--------ETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQ 82 (178)
T ss_dssp HHHHHHHHHCCCTT--------EEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEEC
T ss_pred HHHHHHHHhcccCC--------CeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEec
Confidence 44555566655444 799999999999999999874 237899999999999999875 443 4 4444
Q ss_pred cc-cCCCCCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCe
Q 012571 270 IS-RQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICW 348 (460)
Q Consensus 270 d~-~~Lp~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w 348 (460)
|. +.++..+++||+|++..++.+ ..+++++.++|||||++++.+... .....+..+.++.++
T Consensus 83 d~~~~~~~~~~~~D~i~~~~~~~~-----~~~l~~~~~~L~~gG~l~~~~~~~------------~~~~~~~~~~~~~~~ 145 (178)
T 3hm2_A 83 GAPRAFDDVPDNPDVIFIGGGLTA-----PGVFAAAWKRLPVGGRLVANAVTV------------ESEQMLWALRKQFGG 145 (178)
T ss_dssp CTTGGGGGCCSCCSEEEECC-TTC-----TTHHHHHHHTCCTTCEEEEEECSH------------HHHHHHHHHHHHHCC
T ss_pred chHhhhhccCCCCCEEEECCcccH-----HHHHHHHHHhcCCCCEEEEEeecc------------ccHHHHHHHHHHcCC
Confidence 44 333433389999999876544 458999999999999999988632 223344455555665
Q ss_pred EEE
Q 012571 349 SLI 351 (460)
Q Consensus 349 ~~~ 351 (460)
+..
T Consensus 146 ~~~ 148 (178)
T 3hm2_A 146 TIS 148 (178)
T ss_dssp EEE
T ss_pred eeE
Confidence 553
No 80
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.40 E-value=4.4e-13 Score=131.37 Aligned_cols=135 Identities=14% Similarity=0.081 Sum_probs=89.1
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCC-----------------------------------
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGL----------------------------------- 262 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl----------------------------------- 262 (460)
.+|||||||+|.++..++.... .+|+|+|+|+.|++.|+++-.
T Consensus 73 ~~vLDiGcG~G~~~~l~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 73 RTLIDIGSGPTVYQLLSACSHF--EDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp SEEEEETCTTCCGGGTTGGGGC--SEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CeEEEECCCcChHHHHhhccCC--CeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 7899999999995544443322 589999999999998876310
Q ss_pred CeEEEeecccC-CCC-----CCCCccEEEEcccccccc---ccHHHHHHHHHHhcCCCcEEEEEeCCCCCC---CCCCch
Q 012571 263 PAMIGNFISRQ-LPY-----PSLSFDMVHCAQCGIIWD---KKEGIFLIEADRLLKPGGYFVLTSPESKPR---GSSSSR 330 (460)
Q Consensus 263 ~~~~~~~d~~~-Lp~-----~~~sFDlVvs~~~l~~~~---~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~---~~~~~~ 330 (460)
...+..+|... +|+ ++++||+|+++.++++.. ++...+|++++|+|||||+|++.+...... ......
T Consensus 151 ~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~ 230 (289)
T 2g72_A 151 VKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLT 230 (289)
T ss_dssp EEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEE
T ss_pred hceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeee
Confidence 02234446665 553 456799999998776642 467789999999999999999985322110 000000
Q ss_pred hhhHHHHHHHHHHHHhCeEEEeee
Q 012571 331 KNKSLLKVMEEFTEKICWSLIAQQ 354 (460)
Q Consensus 331 e~~~~w~~i~~l~~~~~w~~~~~~ 354 (460)
.....-+.+..+.++.+|+.+...
T Consensus 231 ~~~~~~~~l~~~l~~aGf~~~~~~ 254 (289)
T 2g72_A 231 VVPVSEEEVREALVRSGYKVRDLR 254 (289)
T ss_dssp CCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred eccCCHHHHHHHHHHcCCeEEEee
Confidence 001123456677788888876543
No 81
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.40 E-value=1.2e-12 Score=123.72 Aligned_cols=98 Identities=19% Similarity=0.205 Sum_probs=82.3
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCCeEEEeecccCCCCCCCCccEEEEcc-cccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQLPYPSLSFDMVHCAQ-CGII 292 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~~~~~~~d~~~Lp~~~~sFDlVvs~~-~l~~ 292 (460)
.+|||+|||+|.++..+++. .+++++|+|+.+++.|+++ +..+.+...|...++++ ++||+|++.. ++.|
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~~ 109 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELP-EPVDAITILCDSLNY 109 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCS-SCEEEEEECTTGGGG
T ss_pred CeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCC-CCcCEEEEeCCchhh
Confidence 68999999999999999876 4899999999999998775 45677777788888775 8899999975 6666
Q ss_pred cc--ccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 293 WD--KKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 293 ~~--~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
+. ++...+++++.++|||||.+++..+.
T Consensus 110 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 110 LQTEADVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp CCSHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 63 45567999999999999999997763
No 82
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.40 E-value=1.1e-11 Score=116.05 Aligned_cols=128 Identities=12% Similarity=0.059 Sum_probs=94.5
Q ss_pred HHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCC--eEEEee
Q 012571 196 YSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP--AMIGNF 269 (460)
Q Consensus 196 ~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~--~~~~~~ 269 (460)
....+.+.+....+ .+|||+|||+|.++..+++.+ ..++++|+++.+++.|+++ ++. +.+...
T Consensus 43 ~~~~~l~~l~~~~~--------~~vLDlGcG~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~ 111 (204)
T 3njr_A 43 MRALTLAALAPRRG--------ELLWDIGGGSGSVSVEWCLAG---GRAITIEPRADRIENIQKNIDTYGLSPRMRAVQG 111 (204)
T ss_dssp HHHHHHHHHCCCTT--------CEEEEETCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES
T ss_pred HHHHHHHhcCCCCC--------CEEEEecCCCCHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeC
Confidence 33445566665554 799999999999999999883 6899999999999998765 443 777777
Q ss_pred cccCCCCCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeE
Q 012571 270 ISRQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWS 349 (460)
Q Consensus 270 d~~~Lp~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~ 349 (460)
|..+.......||+|++...+ +.. +++++.++|||||++++..... .....+..+.++.+++
T Consensus 112 d~~~~~~~~~~~D~v~~~~~~-----~~~-~l~~~~~~LkpgG~lv~~~~~~------------~~~~~~~~~l~~~g~~ 173 (204)
T 3njr_A 112 TAPAALADLPLPEAVFIGGGG-----SQA-LYDRLWEWLAPGTRIVANAVTL------------ESETLLTQLHARHGGQ 173 (204)
T ss_dssp CTTGGGTTSCCCSEEEECSCC-----CHH-HHHHHHHHSCTTCEEEEEECSH------------HHHHHHHHHHHHHCSE
T ss_pred chhhhcccCCCCCEEEECCcc-----cHH-HHHHHHHhcCCCcEEEEEecCc------------ccHHHHHHHHHhCCCc
Confidence 776632234579999987532 455 9999999999999999988632 2334445556666666
Q ss_pred EEe
Q 012571 350 LIA 352 (460)
Q Consensus 350 ~~~ 352 (460)
+..
T Consensus 174 i~~ 176 (204)
T 3njr_A 174 LLR 176 (204)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 83
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.39 E-value=7.7e-12 Score=117.06 Aligned_cols=123 Identities=16% Similarity=0.156 Sum_probs=93.0
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEeecccCCC--CCCCCccEEEEcccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQLP--YPSLSFDMVHCAQCG 290 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl-~~~~~~~d~~~Lp--~~~~sFDlVvs~~~l 290 (460)
.+|||||||+|.++..+++... ...++|+|+++.+++.|+++ ++ ++.+..+|...++ +++++||+|++...
T Consensus 43 ~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~- 120 (214)
T 1yzh_A 43 PIHVEVGSGKGAFVSGMAKQNP-DINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS- 120 (214)
T ss_dssp CEEEEESCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC-
T ss_pred CeEEEEccCcCHHHHHHHHHCC-CCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC-
Confidence 6899999999999999998753 36899999999999988765 43 5677777877776 77889999999863
Q ss_pred ccccc--------cHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEEEeee
Q 012571 291 IIWDK--------KEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQQ 354 (460)
Q Consensus 291 ~~~~~--------d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~~~~~ 354 (460)
.+|.. ....++.++.++|||||.+++..... .....+....++.+|+.....
T Consensus 121 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~------------~~~~~~~~~~~~~g~~~~~~~ 180 (214)
T 1yzh_A 121 DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNR------------GLFEYSLVSFSQYGMKLNGVW 180 (214)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCH------------HHHHHHHHHHHHHTCEEEEEE
T ss_pred CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCH------------HHHHHHHHHHHHCCCeeeecc
Confidence 33321 12469999999999999999976421 123445555666788776544
No 84
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.39 E-value=1.2e-12 Score=126.49 Aligned_cols=95 Identities=22% Similarity=0.356 Sum_probs=82.4
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEccccccccccH
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKKE 297 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~d~ 297 (460)
.+|||||||+|.++..+++.. ....++++|+|+.+++.|+++...+.+...|...+++++++||+|++..+.
T Consensus 87 ~~vLdiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~------- 158 (269)
T 1p91_A 87 TAVLDIGCGEGYYTHAFADAL-PEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAP------- 158 (269)
T ss_dssp CEEEEETCTTSTTHHHHHHTC-TTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCC-------
T ss_pred CEEEEECCCCCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCCh-------
Confidence 789999999999999999873 125899999999999999998877788888888899989999999987531
Q ss_pred HHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 298 GIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 298 ~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
.+++++.|+|||||.+++.++..
T Consensus 159 -~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 159 -CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp -CCHHHHHHHEEEEEEEEEEEECT
T ss_pred -hhHHHHHHhcCCCcEEEEEEcCH
Confidence 25899999999999999998864
No 85
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.38 E-value=1.7e-11 Score=110.16 Aligned_cols=138 Identities=14% Similarity=0.092 Sum_probs=102.8
Q ss_pred hHHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEe
Q 012571 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGN 268 (460)
Q Consensus 194 ~~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl-~~~~~~ 268 (460)
....+.+.+.+....+ .+|||+|||+|.++..+++. ..+++++|+++.+++.|+++ ++ .+.+..
T Consensus 21 ~~~~~~~~~~~~~~~~--------~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~ 89 (183)
T 2yxd_A 21 EEIRAVSIGKLNLNKD--------DVVVDVGCGSGGMTVEIAKR---CKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIK 89 (183)
T ss_dssp HHHHHHHHHHHCCCTT--------CEEEEESCCCSHHHHHHHTT---SSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred HHHHHHHHHHcCCCCC--------CEEEEeCCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEE
Confidence 4456666777765544 79999999999999999983 26899999999999998776 33 466666
Q ss_pred ecccCCCCCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCe
Q 012571 269 FISRQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICW 348 (460)
Q Consensus 269 ~d~~~Lp~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w 348 (460)
.|... ++++++||+|++..+ .+...+++++.++ |||.+++..+.. .....+....++.+|
T Consensus 90 ~d~~~-~~~~~~~D~i~~~~~-----~~~~~~l~~~~~~--~gG~l~~~~~~~------------~~~~~~~~~l~~~g~ 149 (183)
T 2yxd_A 90 GRAED-VLDKLEFNKAFIGGT-----KNIEKIIEILDKK--KINHIVANTIVL------------ENAAKIINEFESRGY 149 (183)
T ss_dssp SCHHH-HGGGCCCSEEEECSC-----SCHHHHHHHHHHT--TCCEEEEEESCH------------HHHHHHHHHHHHTTC
T ss_pred CCccc-cccCCCCcEEEECCc-----ccHHHHHHHHhhC--CCCEEEEEeccc------------ccHHHHHHHHHHcCC
Confidence 66655 566789999999875 5667799999999 999999998632 223445666677788
Q ss_pred EEEeeecceeeeee
Q 012571 349 SLIAQQDETFIWQK 362 (460)
Q Consensus 349 ~~~~~~~~~~iw~k 362 (460)
++...+.....+.+
T Consensus 150 ~~~~~~~~~~~~~~ 163 (183)
T 2yxd_A 150 NVDAVNVFISYAKK 163 (183)
T ss_dssp EEEEEEEEEEEEEE
T ss_pred eEEEEEeeeehhhc
Confidence 77665544444433
No 86
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.38 E-value=1.3e-12 Score=124.31 Aligned_cols=101 Identities=13% Similarity=0.050 Sum_probs=82.7
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcC--CCeEEEeecccCCCCCC-----CCccEEEEcccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG--LPAMIGNFISRQLPYPS-----LSFDMVHCAQCG 290 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rg--l~~~~~~~d~~~Lp~~~-----~sFDlVvs~~~l 290 (460)
.+|||||||+|.++..+++.+. +++++|+|+.+++.|+++. .++.+...|...++... ..||+|++..++
T Consensus 58 ~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~~ 134 (245)
T 3ggd_A 58 LPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTGF 134 (245)
T ss_dssp SCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESSS
T ss_pred CeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcchh
Confidence 6899999999999999999864 7899999999999998873 25677777776654322 349999999866
Q ss_pred cccc-ccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 291 IIWD-KKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 291 ~~~~-~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
+++. ++...+++++.++|||||++++.++..
T Consensus 135 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 166 (245)
T 3ggd_A 135 HHIPVEKRELLGQSLRILLGKQGAMYLIELGT 166 (245)
T ss_dssp TTSCGGGHHHHHHHHHHHHTTTCEEEEEEECT
T ss_pred hcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 6663 266789999999999999999998753
No 87
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.38 E-value=2.8e-12 Score=141.10 Aligned_cols=118 Identities=14% Similarity=0.149 Sum_probs=94.6
Q ss_pred HHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----------C-CC
Q 012571 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----------G-LP 263 (460)
Q Consensus 195 ~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----------g-l~ 263 (460)
..++.+.+.+....+ .+|||||||+|.++..|++.+.....++|+|+|+.|++.|+++ + ..
T Consensus 708 qRle~LLelL~~~~g--------~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~n 779 (950)
T 3htx_A 708 QRVEYALKHIRESSA--------STLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKS 779 (950)
T ss_dssp HHHHHHHHHHHHSCC--------SEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSE
T ss_pred HHHHHHHHHhcccCC--------CEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCc
Confidence 345555566554443 7999999999999999998864446899999999999999772 2 24
Q ss_pred eEEEeecccCCCCCCCCccEEEEcccccccccc-HHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 264 AMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKK-EGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 264 ~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~d-~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
+.+..+|...+++.+++||+|++..+++|+.+. ...+++++.|+|||| .+++++++.
T Consensus 780 VefiqGDa~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 780 ATLYDGSILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp EEEEESCTTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred eEEEECchHhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 778888999999999999999999988887532 235899999999999 888888754
No 88
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.37 E-value=9.4e-13 Score=126.13 Aligned_cols=136 Identities=14% Similarity=0.092 Sum_probs=95.9
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcC--CC-------------------------------
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG--LP------------------------------- 263 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rg--l~------------------------------- 263 (460)
..+|||||||+|.++..++..+. .+++++|+|+.+++.|+++. ..
T Consensus 57 ~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 57 GELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp EEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred CCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 37899999999999999888763 48999999999999997651 11
Q ss_pred -e-EEEeecccCCC-CCC---CCccEEEEcccccccc---ccHHHHHHHHHHhcCCCcEEEEEeCCCCCC---CCCCchh
Q 012571 264 -A-MIGNFISRQLP-YPS---LSFDMVHCAQCGIIWD---KKEGIFLIEADRLLKPGGYFVLTSPESKPR---GSSSSRK 331 (460)
Q Consensus 264 -~-~~~~~d~~~Lp-~~~---~sFDlVvs~~~l~~~~---~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~---~~~~~~e 331 (460)
+ .+...|....+ +++ ++||+|++..++++.. ++...+++++.++|||||++++.+...... .......
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~ 214 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFSS 214 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEEC
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCccccc
Confidence 4 66667776653 355 8999999998777433 356789999999999999999988543210 0000000
Q ss_pred hhHHHHHHHHHHHHhCeEEEeee
Q 012571 332 NKSLLKVMEEFTEKICWSLIAQQ 354 (460)
Q Consensus 332 ~~~~w~~i~~l~~~~~w~~~~~~ 354 (460)
..-.-+.+..+.++.+|+++...
T Consensus 215 ~~~~~~~~~~~l~~aGf~~~~~~ 237 (265)
T 2i62_A 215 LPLGWETVRDAVEEAGYTIEQFE 237 (265)
T ss_dssp CCCCHHHHHHHHHHTTCEEEEEE
T ss_pred cccCHHHHHHHHHHCCCEEEEEE
Confidence 01122355667778888876544
No 89
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.36 E-value=8.1e-12 Score=117.52 Aligned_cols=100 Identities=18% Similarity=0.201 Sum_probs=80.2
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEeecccCCC--CCCCCccEEEEcccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQLP--YPSLSFDMVHCAQCG 290 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl-~~~~~~~d~~~Lp--~~~~sFDlVvs~~~l 290 (460)
.+|||||||+|.++..+++... ...++|+|+|+.+++.|+++ ++ ++.+..+|...++ +++++||.|++.+.
T Consensus 40 ~~vLDiGcG~G~~~~~la~~~p-~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~- 117 (213)
T 2fca_A 40 PIHIEVGTGKGQFISGMAKQNP-DINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS- 117 (213)
T ss_dssp CEEEEECCTTSHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC-
T ss_pred ceEEEEecCCCHHHHHHHHHCC-CCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC-
Confidence 6899999999999999998742 36899999999999988765 44 4677777877765 77889999988653
Q ss_pred cccccc--------HHHHHHHHHHhcCCCcEEEEEeC
Q 012571 291 IIWDKK--------EGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 291 ~~~~~d--------~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
.+|... ...+++++.++|||||.+++...
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEES
T ss_pred CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeC
Confidence 333221 24689999999999999999874
No 90
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.36 E-value=6.3e-12 Score=114.01 Aligned_cols=116 Identities=13% Similarity=-0.042 Sum_probs=87.0
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEccccccccc--
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDK-- 295 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~-- 295 (460)
.+|||+|||+|.++..+++++ .++|+|+|+.|++. . ..+.+..+|... ++++++||+|+++...++..+
T Consensus 25 ~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~--~--~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~~~~~~~ 95 (170)
T 3q87_B 25 KIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES--H--RGGNLVRADLLC-SINQESVDVVVFNPPYVPDTDDP 95 (170)
T ss_dssp CEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT--C--SSSCEEECSTTT-TBCGGGCSEEEECCCCBTTCCCT
T ss_pred CeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc--c--cCCeEEECChhh-hcccCCCCEEEECCCCccCCccc
Confidence 689999999999999999886 89999999999988 2 334555566655 566789999999865443221
Q ss_pred ------cHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEEEeeec
Q 012571 296 ------KEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQQD 355 (460)
Q Consensus 296 ------d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~~~~~~ 355 (460)
+...++.++.+.| |||.+++..+... .-+.+..+.++.+|+......
T Consensus 96 ~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~------------~~~~l~~~l~~~gf~~~~~~~ 148 (170)
T 3q87_B 96 IIGGGYLGREVIDRFVDAV-TVGMLYLLVIEAN------------RPKEVLARLEERGYGTRILKV 148 (170)
T ss_dssp TTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGG------------CHHHHHHHHHHTTCEEEEEEE
T ss_pred cccCCcchHHHHHHHHhhC-CCCEEEEEEecCC------------CHHHHHHHHHHCCCcEEEEEe
Confidence 1246889999999 9999999886321 134556677888888765543
No 91
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.36 E-value=2.2e-12 Score=127.24 Aligned_cols=102 Identities=17% Similarity=0.153 Sum_probs=80.4
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcC-----------------------------------
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG----------------------------------- 261 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rg----------------------------------- 261 (460)
..+|||||||+|.++..+++... ..+++|+|+++.|++.|+++.
T Consensus 47 ~~~VLDiGCG~G~~~~~la~~~~-~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 47 GRDVLDLGCNVGHLTLSIACKWG-PSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TSEEEEESCTTCHHHHHHHHHTC-CSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCcEEEeCCCCCHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 37999999999999999998732 268999999999999998761
Q ss_pred ----------------------------CCeEEEeecccCCC-----CCCCCccEEEEcccccccc-----ccHHHHHHH
Q 012571 262 ----------------------------LPAMIGNFISRQLP-----YPSLSFDMVHCAQCGIIWD-----KKEGIFLIE 303 (460)
Q Consensus 262 ----------------------------l~~~~~~~d~~~Lp-----~~~~sFDlVvs~~~l~~~~-----~d~~~~L~e 303 (460)
..+.+..+|....+ +.+++||+|+|..++.+++ ++...++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 23556666554433 5678999999998664432 255679999
Q ss_pred HHHhcCCCcEEEEEeC
Q 012571 304 ADRLLKPGGYFVLTSP 319 (460)
Q Consensus 304 i~RvLkPGG~lvl~~~ 319 (460)
++++|||||+|++...
T Consensus 206 ~~~~LkpGG~lil~~~ 221 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQ 221 (292)
T ss_dssp HHHHEEEEEEEEEECC
T ss_pred HHHHhCCCcEEEEecC
Confidence 9999999999999754
No 92
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.36 E-value=4.5e-12 Score=125.64 Aligned_cols=97 Identities=14% Similarity=0.115 Sum_probs=78.3
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEeecccCCCCCCCCccEEEEccccc
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl-~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~ 291 (460)
..+|||||||+|.++..++.+. ...+|+|+|++++|++.|+++ ++ ++.+..+|...++ +++||+|++...
T Consensus 123 g~rVLDIGcG~G~~ta~~lA~~-~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~FDvV~~~a~-- 197 (298)
T 3fpf_A 123 GERAVFIGGGPLPLTGILLSHV-YGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLEFDVLMVAAL-- 197 (298)
T ss_dssp TCEEEEECCCSSCHHHHHHHHT-TCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCCSEEEECTT--
T ss_pred cCEEEEECCCccHHHHHHHHHc-cCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCcCEEEECCC--
Confidence 3899999999998775544331 236899999999999999876 54 5677788877765 789999998642
Q ss_pred cccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 292 IWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 292 ~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
.++...+++++.|+|||||++++.+..
T Consensus 198 --~~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 198 --AEPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp --CSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred --ccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 367788999999999999999998753
No 93
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.36 E-value=7.3e-12 Score=124.81 Aligned_cols=103 Identities=17% Similarity=0.138 Sum_probs=84.7
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccCCCCCCCCccEEEEccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~ 291 (460)
.+|||||||+|.++..+++... ..+++++|++ .+++.|+++ ++ .+.+...|....+++++ ||+|++..+++
T Consensus 167 ~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~~l~ 243 (335)
T 2r3s_A 167 LKVLDISASHGLFGIAVAQHNP-NAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGND-YDLVLLPNFLH 243 (335)
T ss_dssp SEEEEETCTTCHHHHHHHHHCT-TCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSC-EEEEEEESCGG
T ss_pred CEEEEECCCcCHHHHHHHHHCC-CCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCC-CcEEEEcchhc
Confidence 7999999999999999998742 3689999999 999988765 33 37777777777676654 99999999888
Q ss_pred ccc-ccHHHHHHHHHHhcCCCcEEEEEeCCCCC
Q 012571 292 IWD-KKEGIFLIEADRLLKPGGYFVLTSPESKP 323 (460)
Q Consensus 292 ~~~-~d~~~~L~ei~RvLkPGG~lvl~~~~~~~ 323 (460)
++. ++...++++++++|||||++++.++....
T Consensus 244 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 276 (335)
T 2r3s_A 244 HFDVATCEQLLRKIKTALAVEGKVIVFDFIPNS 276 (335)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCT
T ss_pred cCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCC
Confidence 884 23357999999999999999999986543
No 94
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.36 E-value=4.6e-12 Score=116.49 Aligned_cols=104 Identities=18% Similarity=0.118 Sum_probs=81.6
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccCCC-CCCCCccEEEEcccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLP-YPSLSFDMVHCAQCG 290 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~Lp-~~~~sFDlVvs~~~l 290 (460)
.+|||+|||+|.++..+++.......++++|+++.+++.|+++ ++ ++.+...|...++ +.+++||+|++....
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~~ 103 (197)
T 3eey_A 24 DTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNLGY 103 (197)
T ss_dssp CEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEESB
T ss_pred CEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcCCc
Confidence 6899999999999999998732224899999999999998776 33 5777878877775 567899999998644
Q ss_pred ccc--------cccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 291 IIW--------DKKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 291 ~~~--------~~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
+.. ..+...+++++.++|||||++++.....
T Consensus 104 ~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 104 LPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp CTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred ccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 221 1133469999999999999999988643
No 95
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.36 E-value=2e-12 Score=128.12 Aligned_cols=101 Identities=24% Similarity=0.319 Sum_probs=81.3
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcC------------CCeEEEeecccCCC----CC--CC
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG------------LPAMIGNFISRQLP----YP--SL 279 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rg------------l~~~~~~~d~~~Lp----~~--~~ 279 (460)
.+|||||||+|.++..+++.+ ...++++|+|+.|++.|+++. ..+.+..+|...++ ++ ++
T Consensus 36 ~~VLDlGcG~G~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 36 ITVLDLGCGKGGDLLKWKKGR--INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp CEEEEETCTTTTTHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CEEEEECCCCcHHHHHHHhcC--CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 789999999999999998763 368999999999999987751 14667777777765 53 45
Q ss_pred CccEEEEcccccccc---ccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 280 SFDMVHCAQCGIIWD---KKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 280 sFDlVvs~~~l~~~~---~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
+||+|+|..++++.. ++...+++++.++|||||+++++.+.
T Consensus 114 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp CEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 999999998554431 33457999999999999999999874
No 96
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.35 E-value=1e-11 Score=116.96 Aligned_cols=123 Identities=20% Similarity=0.152 Sum_probs=91.4
Q ss_pred CeEEEeCCC-CchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCCeEEEeecccCC-CCCCCCccEEEEccccc
Q 012571 218 QSVLDVGCG-FGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQL-PYPSLSFDMVHCAQCGI 291 (460)
Q Consensus 218 ~~VLDIGCG-tG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~~~~~~~d~~~L-p~~~~sFDlVvs~~~l~ 291 (460)
.+|||+||| +|.++..+++.. ...++|+|+++.+++.|+++ ++++.+...|...+ ++++++||+|+++-..+
T Consensus 57 ~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~~ 134 (230)
T 3evz_A 57 EVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPYY 134 (230)
T ss_dssp CEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCCC
T ss_pred CEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCCCc
Confidence 799999999 999999999883 36899999999999998765 55677777775433 45678999999974332
Q ss_pred ccc------------------ccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEEEee
Q 012571 292 IWD------------------KKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQ 353 (460)
Q Consensus 292 ~~~------------------~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~~~~ 353 (460)
+.. .....+++++.++|||||++++..+.. ......+..+.++.+|+....
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-----------~~~~~~~~~~l~~~g~~~~~~ 203 (230)
T 3evz_A 135 DKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK-----------EKLLNVIKERGIKLGYSVKDI 203 (230)
T ss_dssp ---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC-----------HHHHHHHHHHHHHTTCEEEEE
T ss_pred CCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc-----------HhHHHHHHHHHHHcCCceEEE
Confidence 221 113578999999999999999986532 233455666777888876443
No 97
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.35 E-value=6.2e-12 Score=117.66 Aligned_cols=135 Identities=19% Similarity=0.105 Sum_probs=93.5
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHH----HH----cCC-CeEEEeecccCCCCCCCCccEEEEcc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLA----LE----RGL-PAMIGNFISRQLPYPSLSFDMVHCAQ 288 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A----~~----rgl-~~~~~~~d~~~Lp~~~~sFDlVvs~~ 288 (460)
.+|||||||+|.++..+++.. ...+++|+|+|+.|++.+ ++ .+. ++.+..+|..++|+++++ |.|+...
T Consensus 29 ~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~~~ 106 (218)
T 3mq2_A 29 DVVLDVGTGDGKHPYKVARQN-PSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHVLM 106 (218)
T ss_dssp EEEEEESCTTCHHHHHHHHHC-TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEEES
T ss_pred CEEEEecCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEEEc
Confidence 789999999999999999974 237899999999988753 21 233 577888899999988777 8877432
Q ss_pred ccc----cccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCC------CchhhhHHHHHHHHHHHHhCeEEEeee
Q 012571 289 CGI----IWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSS------SSRKNKSLLKVMEEFTEKICWSLIAQQ 354 (460)
Q Consensus 289 ~l~----~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~------~~~e~~~~w~~i~~l~~~~~w~~~~~~ 354 (460)
... |+.+++..++++++|+|||||.+++......+.... +.......-+.+..+.++.+|++....
T Consensus 107 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~~~ 182 (218)
T 3mq2_A 107 PWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLADCR 182 (218)
T ss_dssp CCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred cchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCceeee
Confidence 111 123455789999999999999999975432221111 110111122336778888999886653
No 98
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.35 E-value=1.9e-11 Score=110.62 Aligned_cols=130 Identities=17% Similarity=0.155 Sum_probs=95.4
Q ss_pred HHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEe
Q 012571 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGN 268 (460)
Q Consensus 195 ~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~ 268 (460)
.....+.+.+....+ .+|||+|||+|.++..+++.+ ..++++|+++.+++.++++ +. .+.+..
T Consensus 20 ~~~~~~~~~~~~~~~--------~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~ 88 (192)
T 1l3i_A 20 EVRCLIMCLAEPGKN--------DVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLME 88 (192)
T ss_dssp HHHHHHHHHHCCCTT--------CEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEE
T ss_pred HHHHHHHHhcCCCCC--------CEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEe
Confidence 445556666665544 799999999999999999886 6899999999999998774 33 566666
Q ss_pred ecccCCCCCC-CCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhC
Q 012571 269 FISRQLPYPS-LSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKIC 347 (460)
Q Consensus 269 ~d~~~Lp~~~-~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~ 347 (460)
.|... ++++ ++||+|++...+. +...+++++.++|+|||.+++..+.. .....+..+.++.+
T Consensus 89 ~d~~~-~~~~~~~~D~v~~~~~~~----~~~~~l~~~~~~l~~gG~l~~~~~~~------------~~~~~~~~~l~~~g 151 (192)
T 1l3i_A 89 GDAPE-ALCKIPDIDIAVVGGSGG----ELQEILRIIKDKLKPGGRIIVTAILL------------ETKFEAMECLRDLG 151 (192)
T ss_dssp SCHHH-HHTTSCCEEEEEESCCTT----CHHHHHHHHHHTEEEEEEEEEEECBH------------HHHHHHHHHHHHTT
T ss_pred cCHHH-hcccCCCCCEEEECCchH----HHHHHHHHHHHhcCCCcEEEEEecCc------------chHHHHHHHHHHCC
Confidence 65544 2233 5899999986432 44679999999999999999988631 23345566667777
Q ss_pred eEEEe
Q 012571 348 WSLIA 352 (460)
Q Consensus 348 w~~~~ 352 (460)
|+...
T Consensus 152 ~~~~~ 156 (192)
T 1l3i_A 152 FDVNI 156 (192)
T ss_dssp CCCEE
T ss_pred CceEE
Confidence 74433
No 99
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.34 E-value=8.1e-12 Score=115.75 Aligned_cols=117 Identities=16% Similarity=0.137 Sum_probs=90.6
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCC-eEEEeecccCCCCCCCCccEEEEcccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP-AMIGNFISRQLPYPSLSFDMVHCAQCGII 292 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~-~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~ 292 (460)
.+|||+|||+|.++..+++.+. ..++++|+++.+++.|+++ +.. +.+...|... +.+++||+|++...+.+
T Consensus 62 ~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~--~~~~~fD~i~~~~~~~~ 137 (205)
T 3grz_A 62 LTVADVGTGSGILAIAAHKLGA--KSVLATDISDESMTAAEENAALNGIYDIALQKTSLLA--DVDGKFDLIVANILAEI 137 (205)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTT--TCCSCEEEEEEESCHHH
T ss_pred CEEEEECCCCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccc--cCCCCceEEEECCcHHH
Confidence 7899999999999999988743 5899999999999998876 443 6677666654 34689999999864332
Q ss_pred ccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEEEeee
Q 012571 293 WDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQQ 354 (460)
Q Consensus 293 ~~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~~~~~ 354 (460)
...+++++.++|||||++++.+.... ..+.+..+.++.+|+.+...
T Consensus 138 ----~~~~l~~~~~~L~~gG~l~~~~~~~~------------~~~~~~~~~~~~Gf~~~~~~ 183 (205)
T 3grz_A 138 ----LLDLIPQLDSHLNEDGQVIFSGIDYL------------QLPKIEQALAENSFQIDLKM 183 (205)
T ss_dssp ----HHHHGGGSGGGEEEEEEEEEEEEEGG------------GHHHHHHHHHHTTEEEEEEE
T ss_pred ----HHHHHHHHHHhcCCCCEEEEEecCcc------------cHHHHHHHHHHcCCceEEee
Confidence 35689999999999999999876321 23455667778888886643
No 100
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.34 E-value=7.1e-12 Score=119.62 Aligned_cols=120 Identities=16% Similarity=0.147 Sum_probs=90.7
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEeecccCCCCC---CCCccEEEEcc
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQLPYP---SLSFDMVHCAQ 288 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl-~~~~~~~d~~~Lp~~---~~sFDlVvs~~ 288 (460)
..+|||||||+|.++..++... ....++++|+|+.|++.|+++ ++ ++.+..+|..++++. +++||+|++..
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~ 149 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICF-PHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARA 149 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEEC
T ss_pred CCEEEEecCCCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEec
Confidence 3799999999999999998643 236899999999999988764 54 477777777777654 67999999975
Q ss_pred ccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEEEe
Q 012571 289 CGIIWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIA 352 (460)
Q Consensus 289 ~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~~~ 352 (460)
. .+...+++++.++|||||++++..... .......+....+..+|+...
T Consensus 150 ~-----~~~~~~l~~~~~~LkpgG~l~~~~g~~----------~~~~~~~~~~~l~~~g~~~~~ 198 (240)
T 1xdz_A 150 V-----ARLSVLSELCLPLVKKNGLFVALKAAS----------AEEELNAGKKAITTLGGELEN 198 (240)
T ss_dssp C-----SCHHHHHHHHGGGEEEEEEEEEEECC-----------CHHHHHHHHHHHHHTTEEEEE
T ss_pred c-----CCHHHHHHHHHHhcCCCCEEEEEeCCC----------chHHHHHHHHHHHHcCCeEeE
Confidence 2 567789999999999999999875321 112334455566777887654
No 101
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.34 E-value=1.8e-12 Score=120.91 Aligned_cols=109 Identities=20% Similarity=0.277 Sum_probs=86.6
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEccccccccccH
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKKE 297 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~d~ 297 (460)
.+|||||||+|.++..++ ..++++|+++. .+.+...|...+++++++||+|++..++ |+ .+.
T Consensus 69 ~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~----------~~~~~~~d~~~~~~~~~~fD~v~~~~~l-~~-~~~ 130 (215)
T 2zfu_A 69 LVVADFGCGDCRLASSIR------NPVHCFDLASL----------DPRVTVCDMAQVPLEDESVDVAVFCLSL-MG-TNI 130 (215)
T ss_dssp SCEEEETCTTCHHHHHCC------SCEEEEESSCS----------STTEEESCTTSCSCCTTCEEEEEEESCC-CS-SCH
T ss_pred CeEEEECCcCCHHHHHhh------ccEEEEeCCCC----------CceEEEeccccCCCCCCCEeEEEEehhc-cc-cCH
Confidence 689999999999998873 46899999987 2345556777888888999999999866 55 788
Q ss_pred HHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEEEeee
Q 012571 298 GIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQQ 354 (460)
Q Consensus 298 ~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~~~~~ 354 (460)
..+++++.++|||||++++.++.... ...+.+..+.++.+|+.+...
T Consensus 131 ~~~l~~~~~~L~~gG~l~i~~~~~~~----------~~~~~~~~~l~~~Gf~~~~~~ 177 (215)
T 2zfu_A 131 RDFLEEANRVLKPGGLLKVAEVSSRF----------EDVRTFLRAVTKLGFKIVSKD 177 (215)
T ss_dssp HHHHHHHHHHEEEEEEEEEEECGGGC----------SCHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHHhCCCCeEEEEEEcCCCC----------CCHHHHHHHHHHCCCEEEEEe
Confidence 88999999999999999999874321 123456677888999887643
No 102
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.33 E-value=4.4e-12 Score=120.20 Aligned_cols=100 Identities=20% Similarity=0.204 Sum_probs=79.8
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEeecccCC-C--CCCCCccEEEEccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQL-P--YPSLSFDMVHCAQC 289 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl-~~~~~~~d~~~L-p--~~~~sFDlVvs~~~ 289 (460)
.+|||||||+|.++..+++... ...++|+|+|+.+++.|+++ ++ ++.+..+|...+ + +++++||.|++.+
T Consensus 36 ~~vLDiGcG~G~~~~~lA~~~p-~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~- 113 (218)
T 3dxy_A 36 PVTLEIGFGMGASLVAMAKDRP-EQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF- 113 (218)
T ss_dssp CEEEEESCTTCHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES-
T ss_pred CeEEEEeeeChHHHHHHHHHCC-CCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC-
Confidence 6899999999999999998753 36899999999999988765 44 467777776663 3 6789999999875
Q ss_pred cccccccH--------HHHHHHHHHhcCCCcEEEEEeC
Q 012571 290 GIIWDKKE--------GIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 290 l~~~~~d~--------~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
...|.... ..+++++.|+|||||+|++...
T Consensus 114 ~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 114 PDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp CCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred CCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 24443221 2499999999999999999875
No 103
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.32 E-value=6.2e-12 Score=118.38 Aligned_cols=96 Identities=19% Similarity=0.141 Sum_probs=71.0
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHH----HHHHcCCCeEEEeecccC----CCCCCCCccEEEEccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQ----LALERGLPAMIGNFISRQ----LPYPSLSFDMVHCAQC 289 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~----~A~~rgl~~~~~~~d~~~----Lp~~~~sFDlVvs~~~ 289 (460)
.+|||+|||+|.++..+++... ...|+|+|+|+.|++ .|+++ .++.+...|... .++. ++||+|++..
T Consensus 59 ~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~~- 134 (210)
T 1nt2_A 59 ERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER-NNIIPLLFDASKPWKYSGIV-EKVDLIYQDI- 134 (210)
T ss_dssp CEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC-SSEEEECSCTTCGGGTTTTC-CCEEEEEECC-
T ss_pred CEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC-CCeEEEEcCCCCchhhcccc-cceeEEEEec-
Confidence 7899999999999999998743 358999999998654 44433 345555555554 2444 7899999972
Q ss_pred cccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 290 GIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 290 l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
..+ .+...++++++|+|||||+|++..+
T Consensus 135 ~~~--~~~~~~l~~~~r~LkpgG~l~i~~~ 162 (210)
T 1nt2_A 135 AQK--NQIEILKANAEFFLKEKGEVVIMVK 162 (210)
T ss_dssp CST--THHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCh--hHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 222 3344569999999999999999853
No 104
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.32 E-value=8.8e-12 Score=115.78 Aligned_cols=108 Identities=22% Similarity=0.151 Sum_probs=86.5
Q ss_pred HHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEee
Q 012571 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNF 269 (460)
Q Consensus 195 ~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl-~~~~~~~ 269 (460)
.....+.+.+....+ .+|||||||+|.++..+++.+ .+++++|+++.+++.|+++ +. ++.+...
T Consensus 64 ~~~~~~~~~l~~~~~--------~~vLdiG~G~G~~~~~la~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~ 132 (210)
T 3lbf_A 64 YMVARMTELLELTPQ--------SRVLEIGTGSGYQTAILAHLV---QHVCSVERIKGLQWQARRRLKNLDLHNVSTRHG 132 (210)
T ss_dssp HHHHHHHHHTTCCTT--------CEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred HHHHHHHHhcCCCCC--------CEEEEEcCCCCHHHHHHHHhC---CEEEEEecCHHHHHHHHHHHHHcCCCceEEEEC
Confidence 345556666655544 799999999999999999884 6899999999999999875 33 4677777
Q ss_pred cccCCCCCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 270 ISRQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 270 d~~~Lp~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
|......++++||+|++..++.++.+ ++.++|||||++++..+.
T Consensus 133 d~~~~~~~~~~~D~i~~~~~~~~~~~-------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 133 DGWQGWQARAPFDAIIVTAAPPEIPT-------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CGGGCCGGGCCEEEEEESSBCSSCCT-------HHHHTEEEEEEEEEEECS
T ss_pred CcccCCccCCCccEEEEccchhhhhH-------HHHHhcccCcEEEEEEcC
Confidence 77776666789999999976666542 689999999999999885
No 105
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.32 E-value=4.3e-12 Score=118.20 Aligned_cols=101 Identities=19% Similarity=0.140 Sum_probs=79.8
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC---CeEEEeecccCCC--CCCCC-ccEEEEc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL---PAMIGNFISRQLP--YPSLS-FDMVHCA 287 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl---~~~~~~~d~~~Lp--~~~~s-FDlVvs~ 287 (460)
.+|||+|||+|.++..++.++. ..|+++|+|+.+++.|+++ ++ .+.+...|..++. +++++ ||+|++.
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSRQA--KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CeEEEcCCccCHHHHHHHHccC--CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 6899999999999998887764 5899999999999998775 43 5777777766543 23678 9999998
Q ss_pred cccccccccHHHHHHHH--HHhcCCCcEEEEEeCCCC
Q 012571 288 QCGIIWDKKEGIFLIEA--DRLLKPGGYFVLTSPESK 322 (460)
Q Consensus 288 ~~l~~~~~d~~~~L~ei--~RvLkPGG~lvl~~~~~~ 322 (460)
.. ++. .+...+++++ .++|||||.++++.....
T Consensus 133 ~~-~~~-~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 133 PP-FHF-NLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp CC-SSS-CHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred CC-CCC-ccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 64 343 4566788888 678999999999886543
No 106
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.32 E-value=1.3e-11 Score=122.27 Aligned_cols=129 Identities=15% Similarity=0.136 Sum_probs=89.6
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEE-eecccCCC---CCCCCccEEEEccccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIG-NFISRQLP---YPSLSFDMVHCAQCGIIW 293 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~-~~d~~~Lp---~~~~sFDlVvs~~~l~~~ 293 (460)
.+|||||||||.++..+++.+. ..|+|+|+|+.|++.+.++...+... ..+...++ ++..+||+|++..++++.
T Consensus 87 ~~vLDiGcGTG~~t~~L~~~ga--~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~sl 164 (291)
T 3hp7_A 87 MITIDIGASTGGFTDVMLQNGA--KLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFISL 164 (291)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC--SEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSSCG
T ss_pred cEEEecCCCccHHHHHHHhCCC--CEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEEeeHhhH
Confidence 6999999999999999998863 58999999999999876654444322 22233332 344569999997654433
Q ss_pred cccHHHHHHHHHHhcCCCcEEEEEeCCCCCC--------CCC-CchhhhHHHHHHHHHHHHhCeEEEe
Q 012571 294 DKKEGIFLIEADRLLKPGGYFVLTSPESKPR--------GSS-SSRKNKSLLKVMEEFTEKICWSLIA 352 (460)
Q Consensus 294 ~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~--------~~~-~~~e~~~~w~~i~~l~~~~~w~~~~ 352 (460)
..+|.+++|+|||||.+++...+.-.. +.. .+..+...-+.+..+++..+|.+..
T Consensus 165 ----~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~ 228 (291)
T 3hp7_A 165 ----NLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKG 228 (291)
T ss_dssp ----GGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEE
T ss_pred ----HHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 568999999999999999984322111 111 1223444556777888889998754
No 107
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.31 E-value=1.6e-11 Score=120.41 Aligned_cols=104 Identities=13% Similarity=0.019 Sum_probs=81.3
Q ss_pred CCeEEEeCCCC---chHHHHHHhccCceeEEEEeeCCHHHHHHHHHc---CCCeEEEeecccCCC-----------CCCC
Q 012571 217 VQSVLDVGCGF---GSFGAHLVSLKLMAVCVAVYEATGSQVQLALER---GLPAMIGNFISRQLP-----------YPSL 279 (460)
Q Consensus 217 ~~~VLDIGCGt---G~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r---gl~~~~~~~d~~~Lp-----------~~~~ 279 (460)
..+|||||||+ |.++..+.+... ..+|+++|+|+.|++.|+++ ...+.+..+|..+.+ ++.+
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p-~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~ 156 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNP-DARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFS 156 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCT-TCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTT
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCC-CCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCC
Confidence 47999999999 988876665532 36899999999999999876 235677777764321 2235
Q ss_pred CccEEEEccccccccc-cHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 280 SFDMVHCAQCGIIWDK-KEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 280 sFDlVvs~~~l~~~~~-d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
+||+|++..+++++.+ +...+|++++++|||||+|++++...
T Consensus 157 ~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 157 RPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp SCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 8999999987777753 37789999999999999999998754
No 108
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.31 E-value=6.1e-12 Score=127.47 Aligned_cols=96 Identities=21% Similarity=0.235 Sum_probs=79.7
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCC--eEEEeecccCCCCCCCCccEEEEccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP--AMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~--~~~~~~d~~~Lp~~~~sFDlVvs~~~l~ 291 (460)
.+|||||||+|.++..+++.+. .+++|+|+|+ +++.|+++ ++. +.+..+|.+++++++++||+|++.....
T Consensus 68 ~~VLDvGcG~G~~~~~la~~g~--~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~ 144 (349)
T 3q7e_A 68 KVVLDVGSGTGILCMFAAKAGA--RKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGY 144 (349)
T ss_dssp CEEEEESCTTSHHHHHHHHTTC--SEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCBB
T ss_pred CEEEEEeccchHHHHHHHHCCC--CEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccccc
Confidence 7899999999999999999853 5899999994 88888764 443 7888889999999889999999965322
Q ss_pred --cccccHHHHHHHHHHhcCCCcEEEE
Q 012571 292 --IWDKKEGIFLIEADRLLKPGGYFVL 316 (460)
Q Consensus 292 --~~~~d~~~~L~ei~RvLkPGG~lvl 316 (460)
+...+...++.++.|+|||||+++.
T Consensus 145 ~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 145 CLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp TBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 2336777899999999999999973
No 109
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.30 E-value=3.8e-11 Score=120.07 Aligned_cols=102 Identities=19% Similarity=0.154 Sum_probs=83.3
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----C--CCeEEEeecccCCCCCCCCccEEEEcccc
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----G--LPAMIGNFISRQLPYPSLSFDMVHCAQCG 290 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----g--l~~~~~~~d~~~Lp~~~~sFDlVvs~~~l 290 (460)
..+|||||||+|.++..++++.. ..+++++|+ +.+++.|+++ + ..+.+...|.. .+++. +||+|++..++
T Consensus 170 ~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~vl 245 (332)
T 3i53_A 170 LGHVVDVGGGSGGLLSALLTAHE-DLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSAVL 245 (332)
T ss_dssp GSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEESCG
T ss_pred CCEEEEeCCChhHHHHHHHHHCC-CCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEehhh
Confidence 47999999999999999998753 368899999 9999988765 3 34777777765 45555 89999999988
Q ss_pred cccccc-HHHHHHHHHHhcCCCcEEEEEeCCCC
Q 012571 291 IIWDKK-EGIFLIEADRLLKPGGYFVLTSPESK 322 (460)
Q Consensus 291 ~~~~~d-~~~~L~ei~RvLkPGG~lvl~~~~~~ 322 (460)
++|.++ ...+|++++++|||||++++.+....
T Consensus 246 h~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 278 (332)
T 3i53_A 246 HDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAG 278 (332)
T ss_dssp GGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC
T ss_pred ccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCC
Confidence 888533 36799999999999999999987654
No 110
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.30 E-value=5.7e-12 Score=129.84 Aligned_cols=124 Identities=15% Similarity=0.106 Sum_probs=96.0
Q ss_pred ccc-cchhHHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc------
Q 012571 188 LVF-DGVKDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER------ 260 (460)
Q Consensus 188 ~~f-d~~~~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r------ 260 (460)
..| ......+..+.+.+....+ .+|||||||+|.++..++.... ...++|+|+++.+++.|++.
T Consensus 152 ~vYGEt~~~~i~~il~~l~l~~g--------d~VLDLGCGtG~l~l~lA~~~g-~~kVvGIDiS~~~lelAr~n~e~frk 222 (438)
T 3uwp_A 152 EVYGETSFDLVAQMIDEIKMTDD--------DLFVDLGSGVGQVVLQVAAATN-CKHHYGVEKADIPAKYAETMDREFRK 222 (438)
T ss_dssp GGGGGTHHHHHHHHHHHHCCCTT--------CEEEEESCTTSHHHHHHHHHCC-CSEEEEEECCHHHHHHHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHhcCCCCC--------CEEEEeCCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 444 3345667777788877665 7999999999999999987532 23699999999999888652
Q ss_pred -----C---CCeEEEeecccCCCCCC--CCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCC
Q 012571 261 -----G---LPAMIGNFISRQLPYPS--LSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPESK 322 (460)
Q Consensus 261 -----g---l~~~~~~~d~~~Lp~~~--~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~~ 322 (460)
+ .++.+..+|...+++.+ ..||+|+++.. +++ ++....|.+++|+|||||+|++++....
T Consensus 223 r~~~~Gl~~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~-~F~-pdl~~aL~Ei~RvLKPGGrIVssE~f~p 292 (438)
T 3uwp_A 223 WMKWYGKKHAEYTLERGDFLSEEWRERIANTSVIFVNNF-AFG-PEVDHQLKERFANMKEGGRIVSSKPFAP 292 (438)
T ss_dssp HHHHHTBCCCEEEEEECCTTSHHHHHHHHTCSEEEECCT-TCC-HHHHHHHHHHHTTSCTTCEEEESSCSSC
T ss_pred HHHHhCCCCCCeEEEECcccCCccccccCCccEEEEccc-ccC-chHHHHHHHHHHcCCCCcEEEEeecccC
Confidence 3 35778888888888754 47999999753 443 6777889999999999999999876554
No 111
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.30 E-value=4.1e-12 Score=130.52 Aligned_cols=100 Identities=23% Similarity=0.220 Sum_probs=84.4
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCCeEEEeecccCCCCCCCCccEEEEccccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIW 293 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~ 293 (460)
.+|||+|||+|.++..+++.+ .+++++|+++.+++.|+++ ++.+.+...|....+.++++||+|+++..+++.
T Consensus 235 ~~VLDlGcG~G~~~~~la~~g---~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~ 311 (381)
T 3dmg_A 235 RQVLDLGAGYGALTLPLARMG---AEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHVG 311 (381)
T ss_dssp CEEEEETCTTSTTHHHHHHTT---CEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCTT
T ss_pred CEEEEEeeeCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhhc
Confidence 689999999999999999985 5899999999999998765 556788888888877777899999998654431
Q ss_pred ----cccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 294 ----DKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 294 ----~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
.++...+++++.++|||||.++++...
T Consensus 312 ~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 312 GAVILDVAQAFVNVAAARLRPGGVFFLVSNP 342 (381)
T ss_dssp CSSCCHHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred ccccHHHHHHHHHHHHHhcCcCcEEEEEEcC
Confidence 245567999999999999999998764
No 112
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.30 E-value=1.5e-11 Score=117.92 Aligned_cols=100 Identities=18% Similarity=0.193 Sum_probs=77.4
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----------CC-CeEEEeecccC-CC--CCCCCccE
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----------GL-PAMIGNFISRQ-LP--YPSLSFDM 283 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----------gl-~~~~~~~d~~~-Lp--~~~~sFDl 283 (460)
.+|||||||+|.++..|++... ...++|+|+|+.|++.|+++ +. ++.+..+|+.. ++ +++++||.
T Consensus 48 ~~vLDiGcG~G~~~~~la~~~p-~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D~ 126 (235)
T 3ckk_A 48 VEFADIGCGYGGLLVELSPLFP-DTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLTK 126 (235)
T ss_dssp EEEEEETCTTCHHHHHHGGGST-TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEEE
T ss_pred CeEEEEccCCcHHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCeeE
Confidence 6899999999999999998753 36899999999999988642 22 46777777775 66 77899999
Q ss_pred EEEcccccccccc--------HHHHHHHHHHhcCCCcEEEEEeC
Q 012571 284 VHCAQCGIIWDKK--------EGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 284 Vvs~~~l~~~~~d--------~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
|++.+. ..|... ...+++++.++|||||.|++...
T Consensus 127 v~~~~~-dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 127 MFFLFP-DPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp EEEESC-C-----------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred EEEeCC-CchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 987642 333211 13699999999999999999865
No 113
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.29 E-value=1.7e-11 Score=116.60 Aligned_cols=134 Identities=12% Similarity=0.107 Sum_probs=85.0
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCC-HHHHHHH---HHc----CC-CeEEEeecccCCCCCCCCccEEEEcc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEAT-GSQVQLA---LER----GL-PAMIGNFISRQLPYPSLSFDMVHCAQ 288 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s-~~~l~~A---~~r----gl-~~~~~~~d~~~Lp~~~~sFDlVvs~~ 288 (460)
.+|||||||+|.++..++++. ....++|+|+| +.|++.| +++ ++ ++.+..+|.+.+|. ..||.|.+..
T Consensus 26 ~~vLDiGCG~G~~~~~la~~~-~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~--~~~d~v~~i~ 102 (225)
T 3p2e_A 26 RVHIDLGTGDGRNIYKLAIND-QNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPF--ELKNIADSIS 102 (225)
T ss_dssp EEEEEETCTTSHHHHHHHHTC-TTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCG--GGTTCEEEEE
T ss_pred CEEEEEeccCcHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhh--hccCeEEEEE
Confidence 689999999999999999653 33789999999 7777766 433 44 47788888888863 2334444433
Q ss_pred cccccc-------ccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCC-----chhhhHHH---HHHHHHHHHhCeEEEee
Q 012571 289 CGIIWD-------KKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSS-----SRKNKSLL---KVMEEFTEKICWSLIAQ 353 (460)
Q Consensus 289 ~l~~~~-------~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~-----~~e~~~~w---~~i~~l~~~~~w~~~~~ 353 (460)
+.+.|. .+...++++++|+|||||++++...........+ .......| .++..+.++.+|++...
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~aGf~v~~~ 182 (225)
T 3p2e_A 103 ILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSEQYKAELSNSGFRIDDV 182 (225)
T ss_dssp EESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC--------------CCHHHHHSHHHHHHHHHHTCEEEEE
T ss_pred EeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhcCCCCCChhhcchHHHHHHHHHcCCCeeee
Confidence 323331 2334689999999999999999443222111000 00011112 23677778889988665
Q ss_pred e
Q 012571 354 Q 354 (460)
Q Consensus 354 ~ 354 (460)
.
T Consensus 183 ~ 183 (225)
T 3p2e_A 183 K 183 (225)
T ss_dssp E
T ss_pred e
Confidence 4
No 114
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.29 E-value=1.7e-11 Score=120.39 Aligned_cols=101 Identities=18% Similarity=0.158 Sum_probs=77.5
Q ss_pred CeEEEeCCCCch----HHHHHHhc-cCc--eeEEEEeeCCHHHHHHHHHcC-----------------------------
Q 012571 218 QSVLDVGCGFGS----FGAHLVSL-KLM--AVCVAVYEATGSQVQLALERG----------------------------- 261 (460)
Q Consensus 218 ~~VLDIGCGtG~----~a~~La~~-g~~--~~~v~giD~s~~~l~~A~~rg----------------------------- 261 (460)
.+|||+|||||. ++..|++. +.. ..+|+|+|+|+.|++.|++.-
T Consensus 107 ~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 186 (274)
T 1af7_A 107 YRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGLV 186 (274)
T ss_dssp EEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSEE
T ss_pred cEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCce
Confidence 689999999998 56666654 211 268999999999999998641
Q ss_pred -------CCeEEEeecccCCCCC-CCCccEEEEcccccccccc-HHHHHHHHHHhcCCCcEEEEEe
Q 012571 262 -------LPAMIGNFISRQLPYP-SLSFDMVHCAQCGIIWDKK-EGIFLIEADRLLKPGGYFVLTS 318 (460)
Q Consensus 262 -------l~~~~~~~d~~~Lp~~-~~sFDlVvs~~~l~~~~~d-~~~~L~ei~RvLkPGG~lvl~~ 318 (460)
..+.+...|....|++ .+.||+|+|.++++++.++ ..++++++++.|||||+|++..
T Consensus 187 ~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 187 RVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGH 252 (274)
T ss_dssp EECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECT
T ss_pred eechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEe
Confidence 1355666676665665 5789999999987777432 2579999999999999998843
No 115
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.29 E-value=5.6e-11 Score=121.01 Aligned_cols=103 Identities=17% Similarity=0.113 Sum_probs=83.2
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----C--CCeEEEeecccCCCCCCCCccEEEEcccc
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----G--LPAMIGNFISRQLPYPSLSFDMVHCAQCG 290 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----g--l~~~~~~~d~~~Lp~~~~sFDlVvs~~~l 290 (460)
..+|||||||+|.++..++++.. ..+++++|+ +.+++.|+++ + ..+.+...|.. .+++. .||+|++..++
T Consensus 203 ~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~-~~D~v~~~~vl 278 (369)
T 3gwz_A 203 AATAVDIGGGRGSLMAAVLDAFP-GLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIPD-GADVYLIKHVL 278 (369)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-SCSEEEEESCG
T ss_pred CcEEEEeCCCccHHHHHHHHHCC-CCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-CceEEEhhhhh
Confidence 37999999999999999998843 368899999 9999988764 3 24777777765 45655 89999999988
Q ss_pred ccccccH-HHHHHHHHHhcCCCcEEEEEeCCCCC
Q 012571 291 IIWDKKE-GIFLIEADRLLKPGGYFVLTSPESKP 323 (460)
Q Consensus 291 ~~~~~d~-~~~L~ei~RvLkPGG~lvl~~~~~~~ 323 (460)
++|.++. ..+|++++++|||||++++.+.....
T Consensus 279 h~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 312 (369)
T 3gwz_A 279 HDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDE 312 (369)
T ss_dssp GGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCS
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 8884322 26999999999999999999876543
No 116
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.29 E-value=2.4e-11 Score=115.17 Aligned_cols=125 Identities=14% Similarity=0.118 Sum_probs=86.7
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc---CCCeEEEeecccC----CCCCCCCccEEEEcccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER---GLPAMIGNFISRQ----LPYPSLSFDMVHCAQCG 290 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r---gl~~~~~~~d~~~----Lp~~~~sFDlVvs~~~l 290 (460)
.+|||+|||+|.++..+++... ...++++|+|+.+++.|+++ ..++.+...|... +++. ++||+|+..
T Consensus 76 ~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~D~v~~~--- 150 (230)
T 1fbn_A 76 SKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIV-EKVDVIYED--- 150 (230)
T ss_dssp CEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTS-CCEEEEEEC---
T ss_pred CEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccC-ccEEEEEEe---
Confidence 7899999999999999998732 35899999999999988765 2346666667766 6666 789999932
Q ss_pred ccccccH---HHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEEEee
Q 012571 291 IIWDKKE---GIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQ 353 (460)
Q Consensus 291 ~~~~~d~---~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~~~~ 353 (460)
. .++ ..+++++.++|||||++++..... ......+.. .-.-+.+. +.++.+|+.+..
T Consensus 151 --~-~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~-~~~~~~~~~-~~~~~~l~-~l~~~Gf~~~~~ 210 (230)
T 1fbn_A 151 --V-AQPNQAEILIKNAKWFLKKGGYGMIAIKAR-SIDVTKDPK-EIFKEQKE-ILEAGGFKIVDE 210 (230)
T ss_dssp --C-CSTTHHHHHHHHHHHHEEEEEEEEEEEEGG-GTCSSSCHH-HHHHHHHH-HHHHHTEEEEEE
T ss_pred --c-CChhHHHHHHHHHHHhCCCCcEEEEEEecC-CCCCCCCHH-HhhHHHHH-HHHHCCCEEEEE
Confidence 2 233 568999999999999999972211 111111111 11124455 566778877554
No 117
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.29 E-value=1.6e-11 Score=124.78 Aligned_cols=104 Identities=14% Similarity=0.143 Sum_probs=84.8
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccCC--CCCCCCccEEEEcc
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQL--PYPSLSFDMVHCAQ 288 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~L--p~~~~sFDlVvs~~ 288 (460)
..+|||||||+|.++..++++.. ..+++++|+ +.+++.|+++ ++ ++.+..+|.... |++ ++||+|++..
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~~ 256 (363)
T 3dp7_A 180 PKRLLDIGGNTGKWATQCVQYNK-EVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMSQ 256 (363)
T ss_dssp CSEEEEESCTTCHHHHHHHHHST-TCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEES
T ss_pred CCEEEEeCCCcCHHHHHHHHhCC-CCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEec
Confidence 47999999999999999998753 368999999 9999999876 32 467777777664 565 7899999999
Q ss_pred cccccccc-HHHHHHHHHHhcCCCcEEEEEeCCCCC
Q 012571 289 CGIIWDKK-EGIFLIEADRLLKPGGYFVLTSPESKP 323 (460)
Q Consensus 289 ~l~~~~~d-~~~~L~ei~RvLkPGG~lvl~~~~~~~ 323 (460)
++++|.++ ...+|++++++|||||++++.+.....
T Consensus 257 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (363)
T 3dp7_A 257 FLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDR 292 (363)
T ss_dssp CSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTS
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCC
Confidence 88888533 347899999999999999999976543
No 118
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.29 E-value=1.4e-11 Score=116.09 Aligned_cols=109 Identities=17% Similarity=0.079 Sum_probs=85.3
Q ss_pred HHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCC---CeEEEeecc
Q 012571 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGL---PAMIGNFIS 271 (460)
Q Consensus 195 ~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl---~~~~~~~d~ 271 (460)
...+.+.+.+....+ .+|||||||+|.++..+++.+ .+++++|+++.+++.|+++.. .+.+...|.
T Consensus 57 ~~~~~~~~~~~~~~~--------~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~ 125 (231)
T 1vbf_A 57 NLGIFMLDELDLHKG--------QKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYNNIKLILGDG 125 (231)
T ss_dssp HHHHHHHHHTTCCTT--------CEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCG
T ss_pred HHHHHHHHhcCCCCC--------CEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCc
Confidence 455566666655444 799999999999999999886 589999999999999987722 566766666
Q ss_pred cCCCCCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 272 RQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 272 ~~Lp~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
......+++||+|++..++.++. .++.++|||||++++..+..
T Consensus 126 ~~~~~~~~~fD~v~~~~~~~~~~-------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 126 TLGYEEEKPYDRVVVWATAPTLL-------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp GGCCGGGCCEEEEEESSBBSSCC-------HHHHHTEEEEEEEEEEECSS
T ss_pred ccccccCCCccEEEECCcHHHHH-------HHHHHHcCCCcEEEEEEcCC
Confidence 65323467899999998766653 36899999999999998743
No 119
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.29 E-value=3.7e-11 Score=114.84 Aligned_cols=129 Identities=18% Similarity=0.132 Sum_probs=96.1
Q ss_pred HHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc-----C-CCeEEEeecc
Q 012571 198 RQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER-----G-LPAMIGNFIS 271 (460)
Q Consensus 198 ~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r-----g-l~~~~~~~d~ 271 (460)
..+.+.+...++ .+|||+|||+|.++..+++.-....+++++|+++.+++.|+++ + ..+.+...|.
T Consensus 86 ~~~~~~~~~~~~--------~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~ 157 (258)
T 2pwy_A 86 SAMVTLLDLAPG--------MRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKL 157 (258)
T ss_dssp HHHHHHTTCCTT--------CEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCG
T ss_pred HHHHHHcCCCCC--------CEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECch
Confidence 345555554444 7999999999999999998711226899999999999998876 4 3467777788
Q ss_pred cCCCCCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEEE
Q 012571 272 RQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLI 351 (460)
Q Consensus 272 ~~Lp~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~~ 351 (460)
.+.++++++||+|++. . +++..+++++.++|||||++++..+.. .....+....++.+|..+
T Consensus 158 ~~~~~~~~~~D~v~~~-----~-~~~~~~l~~~~~~L~~gG~l~~~~~~~------------~~~~~~~~~l~~~gf~~~ 219 (258)
T 2pwy_A 158 EEAELEEAAYDGVALD-----L-MEPWKVLEKAALALKPDRFLVAYLPNI------------TQVLELVRAAEAHPFRLE 219 (258)
T ss_dssp GGCCCCTTCEEEEEEE-----S-SCGGGGHHHHHHHEEEEEEEEEEESCH------------HHHHHHHHHHTTTTEEEE
T ss_pred hhcCCCCCCcCEEEEC-----C-cCHHHHHHHHHHhCCCCCEEEEEeCCH------------HHHHHHHHHHHHCCCceE
Confidence 7777888899999984 2 455568999999999999999998732 123334444555778754
Q ss_pred e
Q 012571 352 A 352 (460)
Q Consensus 352 ~ 352 (460)
.
T Consensus 220 ~ 220 (258)
T 2pwy_A 220 R 220 (258)
T ss_dssp E
T ss_pred E
Confidence 4
No 120
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.28 E-value=1.1e-11 Score=125.24 Aligned_cols=95 Identities=18% Similarity=0.225 Sum_probs=78.1
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----C--CCeEEEeecccCCCCCCCCccEEEEccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----G--LPAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----g--l~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~ 291 (460)
.+|||||||+|.++..+++.+. .+++|+|+++ |++.|+++ + ..+.+..+|..++++++++||+|++.....
T Consensus 66 ~~VLDiGcGtG~ls~~la~~g~--~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~ 142 (340)
T 2fyt_A 66 KVVLDVGCGTGILSMFAAKAGA--KKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMGY 142 (340)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC--SEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCBT
T ss_pred CEEEEeeccCcHHHHHHHHcCC--CEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCchh
Confidence 7999999999999999998853 5899999996 88888765 3 357788888888888889999999975222
Q ss_pred --cccccHHHHHHHHHHhcCCCcEEE
Q 012571 292 --IWDKKEGIFLIEADRLLKPGGYFV 315 (460)
Q Consensus 292 --~~~~d~~~~L~ei~RvLkPGG~lv 315 (460)
....+...++.++.|+|||||.++
T Consensus 143 ~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 143 FLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 222456679999999999999998
No 121
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.28 E-value=7.7e-12 Score=116.27 Aligned_cols=113 Identities=13% Similarity=0.198 Sum_probs=85.5
Q ss_pred hhHHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCCeEEEe
Q 012571 193 VKDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGN 268 (460)
Q Consensus 193 ~~~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~~~~~~ 268 (460)
.+.+++.+...++. ..+|||+|||+|.++..++...+. .+++++|+++.|++.++++ |+...+..
T Consensus 36 ld~fY~~~~~~l~~----------~~~VLDlGCG~GplAl~l~~~~p~-a~~~A~Di~~~~leiar~~~~~~g~~~~v~~ 104 (200)
T 3fzg_A 36 LNDFYTYVFGNIKH----------VSSILDFGCGFNPLALYQWNENEK-IIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF 104 (200)
T ss_dssp HHHHHHHHHHHSCC----------CSEEEEETCTTHHHHHHHHCSSCC-CEEEEECSCHHHHHHHHHHHHHSCCSSEEEE
T ss_pred HHHHHHHHHhhcCC----------CCeEEEecCCCCHHHHHHHhcCCC-CEEEEEeCCHHHHHHHHHHHHhcCCCccEEE
Confidence 34556666666532 379999999999999999887554 4999999999999999876 55433322
Q ss_pred ecccCCCCCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012571 269 FISRQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTS 318 (460)
Q Consensus 269 ~d~~~Lp~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~ 318 (460)
.|.... .+.++||+|++...+++. ++.+..+.++++.|||||.|+-..
T Consensus 105 ~d~~~~-~~~~~~DvVLa~k~LHlL-~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 105 LNKESD-VYKGTYDVVFLLKMLPVL-KQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp ECCHHH-HTTSEEEEEEEETCHHHH-HHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred eccccc-CCCCCcChhhHhhHHHhh-hhhHHHHHHHHHHhCCCCEEEEeC
Confidence 333222 356889999999876666 666667779999999999988776
No 122
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.27 E-value=2.2e-11 Score=117.68 Aligned_cols=121 Identities=18% Similarity=0.085 Sum_probs=91.2
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEeecccCCCCC---CCCccEEEEcc
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQLPYP---SLSFDMVHCAQ 288 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl-~~~~~~~d~~~Lp~~---~~sFDlVvs~~ 288 (460)
..+|||||||+|..+..++... ...+|+++|+++.+++.|+++ ++ ++.+...+.++++.. +++||+|++..
T Consensus 81 ~~~vLDiG~G~G~~~i~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~a 159 (249)
T 3g89_A 81 PLRVLDLGTGAGFPGLPLKIVR-PELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVARA 159 (249)
T ss_dssp SCEEEEETCTTTTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEES
T ss_pred CCEEEEEcCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEECC
Confidence 4799999999999999998864 236899999999999998765 55 377777777776643 47999999974
Q ss_pred ccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEEEee
Q 012571 289 CGIIWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQ 353 (460)
Q Consensus 289 ~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~~~~ 353 (460)
+ .+...++.++.++|||||++++..... ...+...+....+.++++....
T Consensus 160 ~-----~~~~~ll~~~~~~LkpgG~l~~~~g~~----------~~~e~~~~~~~l~~~G~~~~~~ 209 (249)
T 3g89_A 160 V-----APLCVLSELLLPFLEVGGAAVAMKGPR----------VEEELAPLPPALERLGGRLGEV 209 (249)
T ss_dssp S-----CCHHHHHHHHGGGEEEEEEEEEEECSC----------CHHHHTTHHHHHHHHTEEEEEE
T ss_pred c-----CCHHHHHHHHHHHcCCCeEEEEEeCCC----------cHHHHHHHHHHHHHcCCeEEEE
Confidence 2 355679999999999999999876421 1233344455566778877543
No 123
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.27 E-value=2.1e-11 Score=110.51 Aligned_cols=117 Identities=17% Similarity=0.089 Sum_probs=86.4
Q ss_pred hhHHHHHHHHHHcc-CCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeE
Q 012571 193 VKDYSRQIAEMIGL-GTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAM 265 (460)
Q Consensus 193 ~~~~~~~i~~~l~~-~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~ 265 (460)
.....+.+.+.+.. .. ..+|||+|||+|.++..+++.+. .+++++|+++.+++.|+++ ++ ++.
T Consensus 28 ~~~~~~~~~~~l~~~~~--------~~~vLD~GcG~G~~~~~~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~ 97 (187)
T 2fhp_A 28 TDKVKESIFNMIGPYFD--------GGMALDLYSGSGGLAIEAVSRGM--DKSICIEKNFAALKVIKENIAITKEPEKFE 97 (187)
T ss_dssp CHHHHHHHHHHHCSCCS--------SCEEEETTCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHTCGGGEE
T ss_pred HHHHHHHHHHHHHhhcC--------CCCEEEeCCccCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHHHhCCCcceE
Confidence 45566677777643 22 27899999999999999888643 5899999999999988765 33 366
Q ss_pred EEeecccCC----CCCCCCccEEEEccccccccccHHHHHHHH--HHhcCCCcEEEEEeCCC
Q 012571 266 IGNFISRQL----PYPSLSFDMVHCAQCGIIWDKKEGIFLIEA--DRLLKPGGYFVLTSPES 321 (460)
Q Consensus 266 ~~~~d~~~L----p~~~~sFDlVvs~~~l~~~~~d~~~~L~ei--~RvLkPGG~lvl~~~~~ 321 (460)
+...|..+. ++.+++||+|++... ++. .+....+..+ .++|||||.+++..+..
T Consensus 98 ~~~~d~~~~~~~~~~~~~~fD~i~~~~~-~~~-~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 98 VRKMDANRALEQFYEEKLQFDLVLLDPP-YAK-QEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp EEESCHHHHHHHHHHTTCCEEEEEECCC-GGG-CCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred EEECcHHHHHHHHHhcCCCCCEEEECCC-CCc-hhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 666665442 223678999999864 332 4555677777 89999999999988754
No 124
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.26 E-value=2.1e-11 Score=113.63 Aligned_cols=100 Identities=14% Similarity=0.047 Sum_probs=79.2
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEeecccC-CCCCCCCccEEEEccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQ-LPYPSLSFDMVHCAQCGI 291 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl-~~~~~~~d~~~-Lp~~~~sFDlVvs~~~l~ 291 (460)
.+|||+|||+|.++..++.++. ..|+++|+|+.|++.|+++ ++ .+.+...|..+ ++..+++||+|++... +
T Consensus 56 ~~vLDlgcG~G~~~~~l~~~~~--~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p-~ 132 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEALSRYA--AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPP-F 132 (202)
T ss_dssp CEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCS-S
T ss_pred CeEEEeCCCcCHHHHHHHhcCC--CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCC-C
Confidence 6899999999999999888764 4899999999999998765 43 56777777655 4556789999999754 3
Q ss_pred cccccHHHHHHHHHH--hcCCCcEEEEEeCCC
Q 012571 292 IWDKKEGIFLIEADR--LLKPGGYFVLTSPES 321 (460)
Q Consensus 292 ~~~~d~~~~L~ei~R--vLkPGG~lvl~~~~~ 321 (460)
+. .+...+++++.+ +|||||.++++....
T Consensus 133 ~~-~~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 133 RR-GLLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp ST-TTHHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred CC-CcHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 43 455668888865 599999999987643
No 125
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.26 E-value=1.1e-11 Score=126.80 Aligned_cols=98 Identities=22% Similarity=0.202 Sum_probs=79.8
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCC--eEEEeecccCCCCCCCCccEEEEccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP--AMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~--~~~~~~d~~~Lp~~~~sFDlVvs~~~l~ 291 (460)
.+|||||||+|.++..+++++. .+|+|+|+| .|++.|+++ ++. +.+..+|.++++++ ++||+|++....+
T Consensus 65 ~~VLDlGcGtG~ls~~la~~g~--~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~~~ 140 (376)
T 3r0q_C 65 KTVLDVGTGSGILAIWSAQAGA--RKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEWMGY 140 (376)
T ss_dssp CEEEEESCTTTHHHHHHHHTTC--SEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECCCBT
T ss_pred CEEEEeccCcCHHHHHHHhcCC--CEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcChhh
Confidence 7999999999999999999864 489999999 999888765 433 77888888888876 8999999965323
Q ss_pred ccc--ccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 292 IWD--KKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 292 ~~~--~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
... .....++.+++++|||||.+++...
T Consensus 141 ~l~~e~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 141 FLLRESMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp TBTTTCTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred cccchHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 322 4567799999999999999987544
No 126
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.26 E-value=3.5e-11 Score=117.94 Aligned_cols=121 Identities=13% Similarity=0.138 Sum_probs=93.2
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCC--eEEEeecccCCCCCCCCccEEEEccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP--AMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~--~~~~~~d~~~Lp~~~~sFDlVvs~~~l~ 291 (460)
.+|||+|||+|.++..+++.+.. .++|+|+|+.+++.|+++ ++. +.+..+|..+++. +++||+|++...
T Consensus 127 ~~VLDlgcG~G~~~~~la~~~~~--~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p-- 201 (278)
T 2frn_A 127 ELVVDMFAGIGHLSLPIAVYGKA--KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV-- 201 (278)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCC--EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC--
T ss_pred CEEEEecccCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc--
Confidence 78999999999999999998642 799999999999998765 443 6788888888776 789999998632
Q ss_pred cccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEEEe
Q 012571 292 IWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIA 352 (460)
Q Consensus 292 ~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~~~ 352 (460)
.....++.++.++|||||++++.+...... ......+.+...+++.+|+...
T Consensus 202 ---~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~------~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 202 ---VRTHEFIPKALSIAKDGAIIHYHNTVPEKL------MPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp ---SSGGGGHHHHHHHEEEEEEEEEEEEEEGGG------TTTTTHHHHHHHHHHTTCEEEE
T ss_pred ---hhHHHHHHHHHHHCCCCeEEEEEEeecccc------ccccHHHHHHHHHHHcCCeeEE
Confidence 233458999999999999999988753111 1112345567778888888755
No 127
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.26 E-value=4.9e-11 Score=115.75 Aligned_cols=110 Identities=21% Similarity=0.122 Sum_probs=86.7
Q ss_pred HHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc-----C---CCeEEEe
Q 012571 197 SRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER-----G---LPAMIGN 268 (460)
Q Consensus 197 ~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r-----g---l~~~~~~ 268 (460)
...+.+.+....+ .+|||+|||+|.++..+++.......++++|+++.+++.|+++ + ..+.+..
T Consensus 88 ~~~i~~~~~~~~~--------~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~ 159 (280)
T 1i9g_A 88 AAQIVHEGDIFPG--------ARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVV 159 (280)
T ss_dssp HHHHHHHTTCCTT--------CEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEEC
T ss_pred HHHHHHHcCCCCC--------CEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEE
Confidence 3445555555444 7999999999999999998621236899999999999988765 3 3577777
Q ss_pred ecccCCCCCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 269 FISRQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 269 ~d~~~Lp~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
.|....++++++||+|++.. +++..++.++.++|||||++++..+.
T Consensus 160 ~d~~~~~~~~~~~D~v~~~~------~~~~~~l~~~~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 160 SDLADSELPDGSVDRAVLDM------LAPWEVLDAVSRLLVAGGVLMVYVAT 205 (280)
T ss_dssp SCGGGCCCCTTCEEEEEEES------SCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred CchHhcCCCCCceeEEEECC------cCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 88888888788999999842 34446899999999999999999873
No 128
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.26 E-value=1.2e-11 Score=118.73 Aligned_cols=101 Identities=13% Similarity=0.035 Sum_probs=77.4
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcC---CCeEEEeecc---cCCCCCCCCccEEEEcccc
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---LPAMIGNFIS---RQLPYPSLSFDMVHCAQCG 290 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rg---l~~~~~~~d~---~~Lp~~~~sFDlVvs~~~l 290 (460)
..+|||+|||+|.++..+++.-.....|+++|+++.|++.++++. -++.....+. ...++..+++|+|++..
T Consensus 78 G~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d~-- 155 (233)
T 4df3_A 78 GDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYADV-- 155 (233)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEECC--
T ss_pred CCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEEec--
Confidence 389999999999999999987334468999999999999887662 1333333333 33456778999998752
Q ss_pred ccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 291 ~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
..+++...++.+++++|||||+++++...
T Consensus 156 -~~~~~~~~~l~~~~r~LKpGG~lvI~ik~ 184 (233)
T 4df3_A 156 -AQPEQAAIVVRNARFFLRDGGYMLMAIKA 184 (233)
T ss_dssp -CCTTHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -cCChhHHHHHHHHHHhccCCCEEEEEEec
Confidence 23356677999999999999999998643
No 129
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.25 E-value=5.2e-11 Score=114.98 Aligned_cols=120 Identities=17% Similarity=0.093 Sum_probs=88.2
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccCCC--CCCCCccEEEEccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLP--YPSLSFDMVHCAQC 289 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~Lp--~~~~sFDlVvs~~~ 289 (460)
.+|||+|||+|.++..+++++. ..++|+|+++.+++.|+++ ++ ++.+...|..+++ +++++||+|+++-.
T Consensus 51 ~~vLDlG~G~G~~~~~la~~~~--~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npP 128 (259)
T 3lpm_A 51 GKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPP 128 (259)
T ss_dssp CEEEETTCTTTHHHHHHHTTCC--CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCC
T ss_pred CEEEEcCCchhHHHHHHHHhcC--CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCC
Confidence 7999999999999999998854 3899999999999998775 44 3777777777665 55789999999632
Q ss_pred cccc-------------------cccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEE
Q 012571 290 GIIW-------------------DKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSL 350 (460)
Q Consensus 290 l~~~-------------------~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~ 350 (460)
.+.. ..+...+++++.++|||||++++..+.. ...++....++.+|..
T Consensus 129 y~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-------------~~~~~~~~l~~~~~~~ 195 (259)
T 3lpm_A 129 YFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPE-------------RLLDIIDIMRKYRLEP 195 (259)
T ss_dssp C-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTT-------------THHHHHHHHHHTTEEE
T ss_pred CCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHH-------------HHHHHHHHHHHCCCce
Confidence 2211 0123568999999999999999976532 1223445556667766
Q ss_pred Ee
Q 012571 351 IA 352 (460)
Q Consensus 351 ~~ 352 (460)
..
T Consensus 196 ~~ 197 (259)
T 3lpm_A 196 KR 197 (259)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 130
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.25 E-value=1.2e-11 Score=111.77 Aligned_cols=114 Identities=16% Similarity=0.115 Sum_probs=83.4
Q ss_pred HHHHHHHHHc-cCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEe
Q 012571 196 YSRQIAEMIG-LGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGN 268 (460)
Q Consensus 196 ~~~~i~~~l~-~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~ 268 (460)
..+.+.+.+. ...+ .+|||+|||+|.++..+++.+. ..++++|+++.+++.|+++ ++ .+.+..
T Consensus 18 ~~~~~~~~l~~~~~~--------~~vLDlGcG~G~~~~~l~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~ 87 (177)
T 2esr_A 18 VRGAIFNMIGPYFNG--------GRVLDLFAGSGGLAIEAVSRGM--SAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLK 87 (177)
T ss_dssp CHHHHHHHHCSCCCS--------CEEEEETCTTCHHHHHHHHTTC--CEEEEECCCHHHHHHHHHHHHTTTCGGGEEEEC
T ss_pred HHHHHHHHHHhhcCC--------CeEEEeCCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHHHcCCCCceEEEE
Confidence 4455555554 2232 7899999999999999998742 5899999999999998765 33 366666
Q ss_pred ecccC-CCCCCCCccEEEEccccccccccHHHHHHHHH--HhcCCCcEEEEEeCCC
Q 012571 269 FISRQ-LPYPSLSFDMVHCAQCGIIWDKKEGIFLIEAD--RLLKPGGYFVLTSPES 321 (460)
Q Consensus 269 ~d~~~-Lp~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~--RvLkPGG~lvl~~~~~ 321 (460)
.|..+ ++..+++||+|++... ++. .....+++.+. ++|||||.+++.....
T Consensus 88 ~d~~~~~~~~~~~fD~i~~~~~-~~~-~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 88 MEAERAIDCLTGRFDLVFLDPP-YAK-ETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp SCHHHHHHHBCSCEEEEEECCS-SHH-HHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CcHHHhHHhhcCCCCEEEECCC-CCc-chHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 66655 3434567999999753 222 34455777776 9999999999988754
No 131
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.25 E-value=2.6e-11 Score=122.04 Aligned_cols=105 Identities=16% Similarity=0.225 Sum_probs=83.5
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccCCC-CCCCCccEEEEccc
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLP-YPSLSFDMVHCAQC 289 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~Lp-~~~~sFDlVvs~~~ 289 (460)
..+|||||||+|.++..++++... .+++++|+ +.+++.|+++ ++ ++.+...|....+ +..+.||+|++..+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~v 257 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQ-LTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDC 257 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTT-CEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESC
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCC-CeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEecc
Confidence 479999999999999999987533 68899999 7788887764 33 3677777766654 13466999999998
Q ss_pred cccccc-cHHHHHHHHHHhcCCCcEEEEEeCCCCC
Q 012571 290 GIIWDK-KEGIFLIEADRLLKPGGYFVLTSPESKP 323 (460)
Q Consensus 290 l~~~~~-d~~~~L~ei~RvLkPGG~lvl~~~~~~~ 323 (460)
+++|.+ +...++++++++|||||++++.+.....
T Consensus 258 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (352)
T 3mcz_A 258 LHYFDAREAREVIGHAAGLVKPGGALLILTMTMND 292 (352)
T ss_dssp GGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCT
T ss_pred cccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 888853 2367999999999999999999876543
No 132
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.24 E-value=3.1e-11 Score=120.42 Aligned_cols=111 Identities=16% Similarity=0.058 Sum_probs=87.5
Q ss_pred HHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEee
Q 012571 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNF 269 (460)
Q Consensus 195 ~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl-~~~~~~~ 269 (460)
...+.+.+.+...++ .+|||||||+|.++..+++.+....+++++|+|+.+++.|+++ ++ .+.+...
T Consensus 62 ~~~~~l~~~l~~~~~--------~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~ 133 (317)
T 1dl5_A 62 SLMALFMEWVGLDKG--------MRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG 133 (317)
T ss_dssp HHHHHHHHHTTCCTT--------CEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred HHHHHHHHhcCCCCc--------CEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEEC
Confidence 455666666665554 7999999999999999998754335799999999999998876 43 3677777
Q ss_pred cccCCCCCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 270 ISRQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 270 d~~~Lp~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
|....+.++++||+|++..++.++. +++.++|||||++++....
T Consensus 134 d~~~~~~~~~~fD~Iv~~~~~~~~~-------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 134 DGYYGVPEFSPYDVIFVTVGVDEVP-------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp CGGGCCGGGCCEEEEEECSBBSCCC-------HHHHHHEEEEEEEEEEBCB
T ss_pred ChhhccccCCCeEEEEEcCCHHHHH-------HHHHHhcCCCcEEEEEECC
Confidence 7776554568899999998766653 5788999999999998754
No 133
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.24 E-value=1.2e-10 Score=117.35 Aligned_cols=100 Identities=14% Similarity=0.072 Sum_probs=75.7
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHH--c--CCCeEEEeecccCCCCCCCCccEEEEccccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALE--R--GLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIW 293 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~--r--gl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~ 293 (460)
.+|||||||+|.++..++++.. ..+++++|++ .++..++. . ..++.+..+|.. .+++ +||+|++..++++|
T Consensus 186 ~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~~-~~~~~~~~~~~~~~~~v~~~~~d~~-~~~p--~~D~v~~~~vlh~~ 260 (348)
T 3lst_A 186 GTVADVGGGRGGFLLTVLREHP-GLQGVLLDRA-EVVARHRLDAPDVAGRWKVVEGDFL-REVP--HADVHVLKRILHNW 260 (348)
T ss_dssp EEEEEETCTTSHHHHHHHHHCT-TEEEEEEECH-HHHTTCCCCCGGGTTSEEEEECCTT-TCCC--CCSEEEEESCGGGS
T ss_pred ceEEEECCccCHHHHHHHHHCC-CCEEEEecCH-HHhhcccccccCCCCCeEEEecCCC-CCCC--CCcEEEEehhccCC
Confidence 7999999999999999998754 3688999994 44441110 1 224677777764 3444 89999999988888
Q ss_pred cccH-HHHHHHHHHhcCCCcEEEEEeCCCC
Q 012571 294 DKKE-GIFLIEADRLLKPGGYFVLTSPESK 322 (460)
Q Consensus 294 ~~d~-~~~L~ei~RvLkPGG~lvl~~~~~~ 322 (460)
.++. ..+|++++++|||||++++.+....
T Consensus 261 ~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~ 290 (348)
T 3lst_A 261 GDEDSVRILTNCRRVMPAHGRVLVIDAVVP 290 (348)
T ss_dssp CHHHHHHHHHHHHHTCCTTCEEEEEECCBC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 5322 5799999999999999999987544
No 134
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.24 E-value=7.6e-12 Score=115.46 Aligned_cols=115 Identities=12% Similarity=0.022 Sum_probs=69.8
Q ss_pred HHHHHHHHHHcc-CCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCCeEEEee
Q 012571 195 DYSRQIAEMIGL-GTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNF 269 (460)
Q Consensus 195 ~~~~~i~~~l~~-~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~~~~~~~ 269 (460)
...+.+.+.+.. .. ..+|||+|||+|.++..+++.+. ..+++++|+++.+++.|+++ +.++.+...
T Consensus 16 ~~~~~~~~~l~~~~~--------~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~ 86 (215)
T 4dzr_A 16 VLVEEAIRFLKRMPS--------GTRVIDVGTGSGCIAVSIALACP-GVSVTAVDLSMDALAVARRNAERFGAVVDWAAA 86 (215)
T ss_dssp HHHHHHHHHHTTCCT--------TEEEEEEESSBCHHHHHHHHHCT-TEEEEEEECC-------------------CCHH
T ss_pred HHHHHHHHHhhhcCC--------CCEEEEecCCHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhCCceEEEEc
Confidence 455556666644 33 37999999999999999999842 36899999999999998765 224455555
Q ss_pred cccCCCCCC-----CCccEEEEccccccc------ccc-------------------HHHHHHHHHHhcCCCcEEEEEeC
Q 012571 270 ISRQLPYPS-----LSFDMVHCAQCGIIW------DKK-------------------EGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 270 d~~~Lp~~~-----~sFDlVvs~~~l~~~------~~d-------------------~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
|... ++++ ++||+|+++...++. ... ...+++++.++|||||++++.+.
T Consensus 87 d~~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 165 (215)
T 4dzr_A 87 DGIE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEV 165 (215)
T ss_dssp HHHH-HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEEC
T ss_pred chHh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 5554 4554 899999996322211 100 15688999999999999544444
No 135
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.24 E-value=3.9e-11 Score=116.98 Aligned_cols=116 Identities=12% Similarity=0.091 Sum_probs=88.1
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc-----CC-CeEEEeecccCCCCCCCCccEEEEccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER-----GL-PAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r-----gl-~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~ 291 (460)
.+|||+|||+|.++..+++.-....+++++|+++.+++.|+++ +. .+.+...|... ++++++||+|++.
T Consensus 112 ~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~fD~Vi~~---- 186 (275)
T 1yb2_A 112 MDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQMYDAVIAD---- 186 (275)
T ss_dssp CEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSCCEEEEEEC----
T ss_pred CEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCCCccEEEEc----
Confidence 7999999999999999998711236899999999999988775 32 46777777766 5677899999983
Q ss_pred cccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEEEe
Q 012571 292 IWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIA 352 (460)
Q Consensus 292 ~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~~~ 352 (460)
. +++..+++++.++|||||++++.++.. .....+....++.+|..+.
T Consensus 187 -~-~~~~~~l~~~~~~LkpgG~l~i~~~~~------------~~~~~~~~~l~~~Gf~~~~ 233 (275)
T 1yb2_A 187 -I-PDPWNHVQKIASMMKPGSVATFYLPNF------------DQSEKTVLSLSASGMHHLE 233 (275)
T ss_dssp -C-SCGGGSHHHHHHTEEEEEEEEEEESSH------------HHHHHHHHHSGGGTEEEEE
T ss_pred -C-cCHHHHHHHHHHHcCCCCEEEEEeCCH------------HHHHHHHHHHHHCCCeEEE
Confidence 2 455679999999999999999998732 1233344445566776544
No 136
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.24 E-value=6.3e-11 Score=113.40 Aligned_cols=107 Identities=23% Similarity=0.293 Sum_probs=84.6
Q ss_pred HHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhc-cCceeEEEEeeCCHHHHHHHHHc----CCC--eEEEeec
Q 012571 198 RQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSL-KLMAVCVAVYEATGSQVQLALER----GLP--AMIGNFI 270 (460)
Q Consensus 198 ~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~-g~~~~~v~giD~s~~~l~~A~~r----gl~--~~~~~~d 270 (460)
..+...+...++ .+|||+|||+|.++..+++. + ....++++|+++.+++.|+++ ++. +.+...|
T Consensus 83 ~~i~~~~~~~~~--------~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d 153 (255)
T 3mb5_A 83 ALIVAYAGISPG--------DFIVEAGVGSGALTLFLANIVG-PEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKD 153 (255)
T ss_dssp HHHHHHTTCCTT--------CEEEEECCTTSHHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSC
T ss_pred HHHHHhhCCCCC--------CEEEEecCCchHHHHHHHHHhC-CCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECc
Confidence 345555555444 79999999999999999988 3 236899999999999999876 443 6777777
Q ss_pred ccCCCCCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 271 SRQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 271 ~~~Lp~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
..+. +++++||+|++.. +++..+++++.++|||||++++..+.
T Consensus 154 ~~~~-~~~~~~D~v~~~~------~~~~~~l~~~~~~L~~gG~l~~~~~~ 196 (255)
T 3mb5_A 154 IYEG-IEEENVDHVILDL------PQPERVVEHAAKALKPGGFFVAYTPC 196 (255)
T ss_dssp GGGC-CCCCSEEEEEECS------SCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred hhhc-cCCCCcCEEEECC------CCHHHHHHHHHHHcCCCCEEEEEECC
Confidence 6644 6788999999842 45556899999999999999998873
No 137
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.23 E-value=3.9e-11 Score=120.46 Aligned_cols=111 Identities=23% Similarity=0.278 Sum_probs=85.0
Q ss_pred HHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEe
Q 012571 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGN 268 (460)
Q Consensus 195 ~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~ 268 (460)
.|.+.+.+.+....+ .+|||||||+|.++..+++.+. .+++++|++ .+++.|+++ ++ .+.+..
T Consensus 25 ~y~~ai~~~~~~~~~--------~~VLDiGcGtG~ls~~la~~g~--~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~ 93 (328)
T 1g6q_1 25 SYRNAIIQNKDLFKD--------KIVLDVGCGTGILSMFAAKHGA--KHVIGVDMS-SIIEMAKELVELNGFSDKITLLR 93 (328)
T ss_dssp HHHHHHHHHHHHHTT--------CEEEEETCTTSHHHHHHHHTCC--SEEEEEESS-THHHHHHHHHHHTTCTTTEEEEE
T ss_pred HHHHHHHhhHhhcCC--------CEEEEecCccHHHHHHHHHCCC--CEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEE
Confidence 455555554444333 7899999999999999998753 489999999 588887665 43 477888
Q ss_pred ecccCCCCCCCCccEEEEccccccc--cccHHHHHHHHHHhcCCCcEEEE
Q 012571 269 FISRQLPYPSLSFDMVHCAQCGIIW--DKKEGIFLIEADRLLKPGGYFVL 316 (460)
Q Consensus 269 ~d~~~Lp~~~~sFDlVvs~~~l~~~--~~d~~~~L~ei~RvLkPGG~lvl 316 (460)
.|..++++++++||+|++....... ......++.++.++|||||.++.
T Consensus 94 ~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 94 GKLEDVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp SCTTTSCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred CchhhccCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 8888888888899999997432322 24567799999999999999973
No 138
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.23 E-value=1.2e-11 Score=110.43 Aligned_cols=114 Identities=21% Similarity=0.235 Sum_probs=82.9
Q ss_pred hHHHHHHHHHHccC--CCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCCeEEE
Q 012571 194 KDYSRQIAEMIGLG--TDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIG 267 (460)
Q Consensus 194 ~~~~~~i~~~l~~~--~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~~~~~ 267 (460)
....+.+.+.+... .+ .+|||+|||+|.++..+++.+. .++++|+++.+++.|+++ ++++.+.
T Consensus 25 ~~~~~~~~~~~~~~~~~~--------~~vLD~GcG~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~~~ 93 (171)
T 1ws6_A 25 VRLRKALFDYLRLRYPRR--------GRFLDPFAGSGAVGLEAASEGW---EAVLVEKDPEAVRLLKENVRRTGLGARVV 93 (171)
T ss_dssp HHHHHHHHHHHHHHCTTC--------CEEEEETCSSCHHHHHHHHTTC---EEEEECCCHHHHHHHHHHHHHHTCCCEEE
T ss_pred HHHHHHHHHHHHhhccCC--------CeEEEeCCCcCHHHHHHHHCCC---eEEEEeCCHHHHHHHHHHHHHcCCceEEE
Confidence 44555555555431 22 6899999999999999999864 499999999999998765 4466676
Q ss_pred eecccCC-C-C--CCCCccEEEEccccccccccHHHHHHHHH--HhcCCCcEEEEEeCCC
Q 012571 268 NFISRQL-P-Y--PSLSFDMVHCAQCGIIWDKKEGIFLIEAD--RLLKPGGYFVLTSPES 321 (460)
Q Consensus 268 ~~d~~~L-p-~--~~~sFDlVvs~~~l~~~~~d~~~~L~ei~--RvLkPGG~lvl~~~~~ 321 (460)
..|..+. + . .+++||+|++.... + .+...+++.+. ++|||||.+++..+..
T Consensus 94 ~~d~~~~~~~~~~~~~~~D~i~~~~~~-~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 94 ALPVEVFLPEAKAQGERFTVAFMAPPY-A--MDLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp CSCHHHHHHHHHHTTCCEEEEEECCCT-T--SCTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred eccHHHHHHhhhccCCceEEEEECCCC-c--hhHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 6665542 2 1 13489999998543 2 34445677777 9999999999988754
No 139
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.23 E-value=1.1e-10 Score=117.87 Aligned_cols=99 Identities=25% Similarity=0.347 Sum_probs=80.0
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccCCCCCCCCccEEEEccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~ 291 (460)
.+|||||||+|.++..+++.+. ...++++|+ +.+++.|+++ ++ .+.+...|..+ +++. .||+|++..+++
T Consensus 185 ~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~vl~ 260 (360)
T 1tw3_A 185 RHVLDVGGGKGGFAAAIARRAP-HVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPR-KADAIILSFVLL 260 (360)
T ss_dssp SEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSS-CEEEEEEESCGG
T ss_pred cEEEEeCCcCcHHHHHHHHhCC-CCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCC-CccEEEEccccc
Confidence 7999999999999999998853 368899999 8899888764 33 47777776654 3444 499999999888
Q ss_pred cccccH-HHHHHHHHHhcCCCcEEEEEeCC
Q 012571 292 IWDKKE-GIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 292 ~~~~d~-~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
++.++. ..++++++++|||||++++.++.
T Consensus 261 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 261 NWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp GSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 885322 47999999999999999999876
No 140
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.23 E-value=4.4e-11 Score=110.61 Aligned_cols=95 Identities=18% Similarity=0.162 Sum_probs=77.7
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCC-eEEEeecccCCCCCCCCccEEEEcccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP-AMIGNFISRQLPYPSLSFDMVHCAQCGII 292 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~-~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~ 292 (460)
.+|||+|||+|.++..++... ...+++++|+++.+++.|+++ ++. +.+...|...++ ++++||+|++.. +
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~-~-- 141 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVR-PEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP-SEPPFDGVISRA-F-- 141 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSC-S--
T ss_pred CeEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-ccCCcCEEEEec-c--
Confidence 689999999999999999863 236899999999999988765 443 677777777665 467899999864 2
Q ss_pred ccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 293 WDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 293 ~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
.+...++.++.++|||||++++...
T Consensus 142 --~~~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 142 --ASLNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp --SSHHHHHHHHTTSEEEEEEEEEEES
T ss_pred --CCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 4566799999999999999999865
No 141
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.23 E-value=4.7e-11 Score=120.99 Aligned_cols=99 Identities=25% Similarity=0.318 Sum_probs=80.2
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccCCCCCCCCccEEEEcccc
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPYPSLSFDMVHCAQCG 290 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~Lp~~~~sFDlVvs~~~l 290 (460)
..+|||||||+|.++..+++... ...++++|+ +.+++.|+++ ++ .+.+...|..+ +++. .||+|++..++
T Consensus 183 ~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~vl 258 (374)
T 1qzz_A 183 VRHVLDVGGGNGGMLAAIALRAP-HLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPV-TADVVLLSFVL 258 (374)
T ss_dssp CCEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSC-CEEEEEEESCG
T ss_pred CCEEEEECCCcCHHHHHHHHHCC-CCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCC-CCCEEEEeccc
Confidence 37999999999999999998853 368999999 9999988765 33 47777776654 3443 39999999988
Q ss_pred ccccccH-HHHHHHHHHhcCCCcEEEEEeC
Q 012571 291 IIWDKKE-GIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 291 ~~~~~d~-~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
+++.+.. ..++++++++|||||++++.++
T Consensus 259 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 259 LNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 8885322 3799999999999999999987
No 142
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.22 E-value=6.6e-11 Score=118.14 Aligned_cols=101 Identities=15% Similarity=0.090 Sum_probs=82.1
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc------CCCeEEEeecccCCCCCCCCccEEEEccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER------GLPAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r------gl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~ 291 (460)
.+|||||||+|.++..++++.. ..+++++|+ +.+++.|+++ ...+.+...|..+ +++ ++||+|++..+++
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~vl~ 244 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEP-SARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLLSRIIG 244 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCT-TCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEEESCGG
T ss_pred CEEEEeCCCchHHHHHHHHHCC-CCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEEchhcc
Confidence 6899999999999999998743 368999999 9999988765 2357777777655 555 6799999999888
Q ss_pred ccccc-HHHHHHHHHHhcCCCcEEEEEeCCCC
Q 012571 292 IWDKK-EGIFLIEADRLLKPGGYFVLTSPESK 322 (460)
Q Consensus 292 ~~~~d-~~~~L~ei~RvLkPGG~lvl~~~~~~ 322 (460)
+|.++ ...++++++++|||||++++.+....
T Consensus 245 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 276 (334)
T 2ip2_A 245 DLDEAASLRLLGNCREAMAGDGRVVVIERTIS 276 (334)
T ss_dssp GCCHHHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 88432 23799999999999999999987543
No 143
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.22 E-value=5.1e-11 Score=121.39 Aligned_cols=100 Identities=14% Similarity=0.056 Sum_probs=81.2
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEcccccccccc
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKK 296 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~d 296 (460)
..+|||||||+|.++..++++.. ..+++++|+ +.+++.|++. ..+.+..+|..+ +++++ |+|++..++++|.++
T Consensus 204 ~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~p~~--D~v~~~~vlh~~~~~ 277 (368)
T 3reo_A 204 LTTIVDVGGGTGAVASMIVAKYP-SINAINFDL-PHVIQDAPAF-SGVEHLGGDMFD-GVPKG--DAIFIKWICHDWSDE 277 (368)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCCC-TTEEEEECCTTT-CCCCC--SEEEEESCGGGBCHH
T ss_pred CCEEEEeCCCcCHHHHHHHHhCC-CCEEEEEeh-HHHHHhhhhc-CCCEEEecCCCC-CCCCC--CEEEEechhhcCCHH
Confidence 47999999999999999998753 367899999 8888877543 457777777665 66654 999999988888533
Q ss_pred -HHHHHHHHHHhcCCCcEEEEEeCCCC
Q 012571 297 -EGIFLIEADRLLKPGGYFVLTSPESK 322 (460)
Q Consensus 297 -~~~~L~ei~RvLkPGG~lvl~~~~~~ 322 (460)
...+|++++++|||||++++.+....
T Consensus 278 ~~~~~l~~~~~~L~pgG~l~i~e~~~~ 304 (368)
T 3reo_A 278 HCLKLLKNCYAALPDHGKVIVAEYILP 304 (368)
T ss_dssp HHHHHHHHHHHHSCTTCEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 34789999999999999999997654
No 144
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.22 E-value=5.2e-11 Score=110.94 Aligned_cols=112 Identities=18% Similarity=0.134 Sum_probs=83.6
Q ss_pred HHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEee
Q 012571 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNF 269 (460)
Q Consensus 195 ~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl-~~~~~~~ 269 (460)
.....+.+.+....+ .+|||||||+|.++..+++.+....+++++|+++.+++.|+++ +. .+.+...
T Consensus 64 ~~~~~~~~~~~~~~~--------~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~ 135 (215)
T 2yxe_A 64 HMVGMMCELLDLKPG--------MKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVG 135 (215)
T ss_dssp HHHHHHHHHTTCCTT--------CEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEES
T ss_pred HHHHHHHHhhCCCCC--------CEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEEC
Confidence 344555666554444 7999999999999999998753235899999999999998875 32 3566666
Q ss_pred cccCCCCCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 270 ISRQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 270 d~~~Lp~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
|.......+++||+|++..++.++. .++.++|||||++++..+..
T Consensus 136 d~~~~~~~~~~fD~v~~~~~~~~~~-------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 136 DGTLGYEPLAPYDRIYTTAAGPKIP-------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp CGGGCCGGGCCEEEEEESSBBSSCC-------HHHHHTEEEEEEEEEEESSS
T ss_pred CcccCCCCCCCeeEEEECCchHHHH-------HHHHHHcCCCcEEEEEECCC
Confidence 5533222367899999998766653 48899999999999998753
No 145
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.22 E-value=1.7e-11 Score=123.62 Aligned_cols=115 Identities=17% Similarity=0.150 Sum_probs=87.3
Q ss_pred HHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCCeEEEeec
Q 012571 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFI 270 (460)
Q Consensus 195 ~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~~~~~~~d 270 (460)
...+.+.+.+....+ .+|||+|||+|.++..+++.+.. .+++++|+|+.+++.|+++ ++...+...|
T Consensus 183 ~~~~~ll~~l~~~~~--------~~VLDlGcG~G~~~~~la~~~~~-~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d 253 (343)
T 2pjd_A 183 VGSQLLLSTLTPHTK--------GKVLDVGCGAGVLSVAFARHSPK-IRLTLCDVSAPAVEASRATLAANGVEGEVFASN 253 (343)
T ss_dssp HHHHHHHHHSCTTCC--------SBCCBTTCTTSHHHHHHHHHCTT-CBCEEEESBHHHHHHHHHHHHHTTCCCEEEECS
T ss_pred HHHHHHHHhcCcCCC--------CeEEEecCccCHHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhCCCCEEEEcc
Confidence 344556666543333 68999999999999999988632 4789999999999988765 5566666666
Q ss_pred ccCCCCCCCCccEEEEccccccc----cccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 271 SRQLPYPSLSFDMVHCAQCGIIW----DKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 271 ~~~Lp~~~~sFDlVvs~~~l~~~----~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
.... .+++||+|+++..+++. .++...+++++.++|||||.+++..+.
T Consensus 254 ~~~~--~~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 254 VFSE--VKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp TTTT--CCSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred cccc--ccCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 5443 47899999998754431 244567999999999999999998764
No 146
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.22 E-value=3.9e-11 Score=121.38 Aligned_cols=113 Identities=23% Similarity=0.223 Sum_probs=87.2
Q ss_pred hHHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEE
Q 012571 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIG 267 (460)
Q Consensus 194 ~~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~ 267 (460)
..|.+.+.+.+....+ .+|||||||+|.++..+++.+. .+++++|+|+ |++.|+++ ++ .+.+.
T Consensus 36 ~~y~~~i~~~l~~~~~--------~~VLDiGcGtG~ls~~la~~g~--~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~ 104 (348)
T 2y1w_A 36 GTYQRAILQNHTDFKD--------KIVLDVGCGSGILSFFAAQAGA--RKIYAVEAST-MAQHAEVLVKSNNLTDRIVVI 104 (348)
T ss_dssp HHHHHHHHHTGGGTTT--------CEEEEETCTTSHHHHHHHHTTC--SEEEEEECST-HHHHHHHHHHHTTCTTTEEEE
T ss_pred HHHHHHHHhccccCCc--------CEEEEcCCCccHHHHHHHhCCC--CEEEEECCHH-HHHHHHHHHHHcCCCCcEEEE
Confidence 3455666666554443 7999999999999999998753 5899999996 88877654 43 47788
Q ss_pred eecccCCCCCCCCccEEEEcccccccc-ccHHHHHHHHHHhcCCCcEEEEEe
Q 012571 268 NFISRQLPYPSLSFDMVHCAQCGIIWD-KKEGIFLIEADRLLKPGGYFVLTS 318 (460)
Q Consensus 268 ~~d~~~Lp~~~~sFDlVvs~~~l~~~~-~d~~~~L~ei~RvLkPGG~lvl~~ 318 (460)
..|..+++++ ++||+|++.....|+. ++....+.++.++|||||.+++..
T Consensus 105 ~~d~~~~~~~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 105 PGKVEEVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp ESCTTTCCCS-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred EcchhhCCCC-CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 8888887765 6899999987666664 344568889999999999998653
No 147
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.21 E-value=8.5e-11 Score=118.85 Aligned_cols=100 Identities=17% Similarity=0.190 Sum_probs=83.4
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccCCCCCCCCccEEEEccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~ 291 (460)
.+|||||||+|.++..++++.. ..+++++|+ +.+++.|+++ ++ ++.+...|..+.++++. |+|++..+++
T Consensus 192 ~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~--D~v~~~~vlh 267 (359)
T 1x19_A 192 KKMIDVGGGIGDISAAMLKHFP-ELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEA--DAVLFCRILY 267 (359)
T ss_dssp CEEEEESCTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCC--SEEEEESCGG
T ss_pred CEEEEECCcccHHHHHHHHHCC-CCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCC--CEEEEechhc
Confidence 7999999999999999998853 368999999 9999988765 33 37788888877776654 9999999888
Q ss_pred cccc-cHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 292 IWDK-KEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 292 ~~~~-d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
+|.+ +...+|++++++|||||++++.+...
T Consensus 268 ~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 268 SANEQLSTIMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp GSCHHHHHHHHHHHHTTCCTTCEEEEEEECC
T ss_pred cCCHHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 8853 25679999999999999999988654
No 148
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.21 E-value=1.3e-10 Score=118.22 Aligned_cols=100 Identities=16% Similarity=0.057 Sum_probs=81.8
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEccccccccc-
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDK- 295 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~- 295 (460)
..+|||||||+|.++..++++.+ ..+++++|+ +.+++.|++. .++.+..+|..+ +++++ |+|++..++++|.+
T Consensus 202 ~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~-~~v~~~~~D~~~-~~p~~--D~v~~~~vlh~~~d~ 275 (364)
T 3p9c_A 202 LGTLVDVGGGVGATVAAIAAHYP-TIKGVNFDL-PHVISEAPQF-PGVTHVGGDMFK-EVPSG--DTILMKWILHDWSDQ 275 (364)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCCC-TTEEEEECCTTT-CCCCC--SEEEEESCGGGSCHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHCC-CCeEEEecC-HHHHHhhhhc-CCeEEEeCCcCC-CCCCC--CEEEehHHhccCCHH
Confidence 47999999999999999998753 367899999 8888877543 467777777766 77654 99999998888853
Q ss_pred cHHHHHHHHHHhcCCCcEEEEEeCCCC
Q 012571 296 KEGIFLIEADRLLKPGGYFVLTSPESK 322 (460)
Q Consensus 296 d~~~~L~ei~RvLkPGG~lvl~~~~~~ 322 (460)
+...+|++++++|||||++++.+....
T Consensus 276 ~~~~~L~~~~~~L~pgG~l~i~e~~~~ 302 (364)
T 3p9c_A 276 HCATLLKNCYDALPAHGKVVLVQCILP 302 (364)
T ss_dssp HHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred HHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 345799999999999999999987654
No 149
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.20 E-value=1.3e-10 Score=111.51 Aligned_cols=131 Identities=16% Similarity=0.032 Sum_probs=80.7
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHH----HHHHHcCCCeEEEeecccCCC---CCCCCccEEEEccc
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQV----QLALERGLPAMIGNFISRQLP---YPSLSFDMVHCAQC 289 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l----~~A~~rgl~~~~~~~d~~~Lp---~~~~sFDlVvs~~~ 289 (460)
..+|||+|||+|.++..+++.......|+++|+++.|+ +.|+++ .++.+...|..... ...++||+|++...
T Consensus 77 g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r-~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a 155 (232)
T 3id6_C 77 GTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR-PNIFPLLADARFPQSYKSVVENVDVLYVDIA 155 (232)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC-TTEEEEECCTTCGGGTTTTCCCEEEEEECCC
T ss_pred CCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc-CCeEEEEcccccchhhhccccceEEEEecCC
Confidence 37999999999999999998733345899999999875 344443 35666666654422 12468999998742
Q ss_pred cccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEEEeee
Q 012571 290 GIIWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQQ 354 (460)
Q Consensus 290 l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~~~~~ 354 (460)
. .+....++..+.++|||||+|+++........+..+.+.. +......++.+|+.+.+.
T Consensus 156 -~--~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~---~~~~~~L~~~gf~~~~~~ 214 (232)
T 3id6_C 156 -Q--PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIY---KTEVEKLENSNFETIQII 214 (232)
T ss_dssp -C--TTHHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSST---THHHHHHHHTTEEEEEEE
T ss_pred -C--hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHH---HHHHHHHHHCCCEEEEEe
Confidence 2 2233334556677999999999986433211111111211 222334445678876654
No 150
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.20 E-value=1.4e-11 Score=111.60 Aligned_cols=111 Identities=18% Similarity=0.059 Sum_probs=82.9
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcC-CCeEEEeecccCCCC---CCCCccEEEEccccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG-LPAMIGNFISRQLPY---PSLSFDMVHCAQCGIIW 293 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rg-l~~~~~~~d~~~Lp~---~~~sFDlVvs~~~l~~~ 293 (460)
.+|||||||. +++|+|+.|++.|+++. ..+.+..+|..++++ ++++||+|+++.+++|+
T Consensus 14 ~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~~~ 76 (176)
T 2ld4_A 14 QFVAVVWDKS-----------------SPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVPGST 76 (176)
T ss_dssp SEEEEEECTT-----------------SCHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCSTTCC
T ss_pred CEEEEecCCc-----------------eeeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChhhhc
Confidence 7999999996 12799999999998873 246777777888876 78999999999876666
Q ss_pred cccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCe
Q 012571 294 DKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICW 348 (460)
Q Consensus 294 ~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w 348 (460)
.++...++++++|+|||||+|++..+....... .......+.+..+.++.+|
T Consensus 77 ~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~---~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 77 TLHSAEILAEIARILRPGGCLFLKEPVETAVDN---NSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp CCCCHHHHHHHHHHEEEEEEEEEEEEEESSSCS---SSSSCCHHHHHHHHHHTTC
T ss_pred ccCHHHHHHHHHHHCCCCEEEEEEccccccccc---ccccCCHHHHHHHHHHCCC
Confidence 367788999999999999999997664322110 0111123556677788888
No 151
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.20 E-value=8.2e-11 Score=113.75 Aligned_cols=117 Identities=16% Similarity=0.108 Sum_probs=88.6
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCCeEEEeecccCCCCCCCCccEEEEccccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIW 293 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~ 293 (460)
.+|||+|||+|.++..+++.+. +++++|+++.+++.|+++ ++.+.+...+.... +++++||+|+++.. .+
T Consensus 122 ~~VLDiGcG~G~l~~~la~~g~---~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~-~~~~~fD~Vv~n~~-~~- 195 (254)
T 2nxc_A 122 DKVLDLGTGSGVLAIAAEKLGG---KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA-LPFGPFDLLVANLY-AE- 195 (254)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH-GGGCCEEEEEEECC-HH-
T ss_pred CEEEEecCCCcHHHHHHHHhCC---eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc-CcCCCCCEEEECCc-HH-
Confidence 7899999999999999998863 899999999999988775 44455555554431 44678999998742 22
Q ss_pred cccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEEEeee
Q 012571 294 DKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQQ 354 (460)
Q Consensus 294 ~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~~~~~ 354 (460)
....++.++.++|||||++++++... .....+....++.+|+++...
T Consensus 196 --~~~~~l~~~~~~LkpgG~lils~~~~------------~~~~~v~~~l~~~Gf~~~~~~ 242 (254)
T 2nxc_A 196 --LHAALAPRYREALVPGGRALLTGILK------------DRAPLVREAMAGAGFRPLEEA 242 (254)
T ss_dssp --HHHHHHHHHHHHEEEEEEEEEEEEEG------------GGHHHHHHHHHHTTCEEEEEE
T ss_pred --HHHHHHHHHHHHcCCCCEEEEEeecc------------CCHHHHHHHHHHCCCEEEEEe
Confidence 23568999999999999999987632 123456667778889886543
No 152
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.19 E-value=4.5e-11 Score=112.47 Aligned_cols=101 Identities=19% Similarity=0.203 Sum_probs=75.8
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccC-CCC-----CCCCccEEE
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQ-LPY-----PSLSFDMVH 285 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~-Lp~-----~~~sFDlVv 285 (460)
.+|||||||+|..+..+++......+++++|+++.+++.|+++ ++ .+.+..+|..+ ++. ..++||+|+
T Consensus 60 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V~ 139 (221)
T 3u81_A 60 SLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMVF 139 (221)
T ss_dssp SEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEEE
T ss_pred CEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEEE
Confidence 7899999999999999998532346899999999999998875 44 36666666533 232 227899999
Q ss_pred EccccccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 286 CAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 286 s~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
+.....++ .+...++.++ ++|||||++++.+..
T Consensus 140 ~d~~~~~~-~~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 140 LDHWKDRY-LPDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp ECSCGGGH-HHHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred EcCCcccc-hHHHHHHHhc-cccCCCeEEEEeCCC
Confidence 97644444 3444567777 999999999987764
No 153
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.19 E-value=5.1e-11 Score=112.88 Aligned_cols=98 Identities=19% Similarity=0.172 Sum_probs=73.2
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHH----HHHHcCCCeEEEeecccC---CCCCCCCccEEEEcccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQ----LALERGLPAMIGNFISRQ---LPYPSLSFDMVHCAQCG 290 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~----~A~~rgl~~~~~~~d~~~---Lp~~~~sFDlVvs~~~l 290 (460)
.+|||+|||+|.++..+++.......++++|+|+.+++ .|+++ ..+.+..+|... +++.+++||+|++...
T Consensus 79 ~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~- 156 (233)
T 2ipx_A 79 AKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-TNIIPVIEDARHPHKYRMLIAMVDVIFADVA- 156 (233)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-TTEEEECSCTTCGGGGGGGCCCEEEEEECCC-
T ss_pred CEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-CCeEEEEcccCChhhhcccCCcEEEEEEcCC-
Confidence 79999999999999999987312258999999987654 44333 456777777665 4556789999999642
Q ss_pred ccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 291 ~~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
..+....++.++.++|||||+++++..
T Consensus 157 --~~~~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 157 --QPDQTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp --CTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --CccHHHHHHHHHHHHcCCCeEEEEEEc
Confidence 222334568899999999999999654
No 154
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.19 E-value=2.9e-11 Score=107.47 Aligned_cols=97 Identities=14% Similarity=0.080 Sum_probs=75.2
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCC--------CCCCCccEEEEccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP--------YPSLSFDMVHCAQC 289 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp--------~~~~sFDlVvs~~~ 289 (460)
.+|||+|||+|.++..+++.......++++|+++ +++. ..+.+...|....+ +++++||+|++...
T Consensus 24 ~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~~ 97 (180)
T 1ej0_A 24 MTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----VGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDMA 97 (180)
T ss_dssp CEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----TTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----CcEEEEEcccccchhhhhhhccCCCCceeEEEECCC
Confidence 6999999999999999998721226899999999 6543 34666667777665 67789999999764
Q ss_pred cccccccH-----------HHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 290 GIIWDKKE-----------GIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 290 l~~~~~d~-----------~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
+. +..+. ..+++++.++|||||.+++..+..
T Consensus 98 ~~-~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 98 PN-MSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp CC-CCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred cc-ccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 33 32333 578999999999999999988743
No 155
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.19 E-value=1.3e-10 Score=109.24 Aligned_cols=97 Identities=19% Similarity=0.135 Sum_probs=76.6
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----C------CCeEEEeecccCCCCCCCCccEEEEc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----G------LPAMIGNFISRQLPYPSLSFDMVHCA 287 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----g------l~~~~~~~d~~~Lp~~~~sFDlVvs~ 287 (460)
.+|||||||+|.++..+++......+++++|+++.+++.++++ + ..+.+...|....+..+++||+|++.
T Consensus 79 ~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~ 158 (226)
T 1i1n_A 79 AKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIHVG 158 (226)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEEEEC
T ss_pred CEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEEEEC
Confidence 7999999999999999998732235899999999999988764 2 15667777766655557789999998
Q ss_pred cccccccccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 288 QCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 288 ~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
....++ +.++.++|||||++++.....
T Consensus 159 ~~~~~~-------~~~~~~~LkpgG~lv~~~~~~ 185 (226)
T 1i1n_A 159 AAAPVV-------PQALIDQLKPGGRLILPVGPA 185 (226)
T ss_dssp SBBSSC-------CHHHHHTEEEEEEEEEEESCT
T ss_pred CchHHH-------HHHHHHhcCCCcEEEEEEecC
Confidence 754443 468899999999999988643
No 156
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.19 E-value=4.2e-11 Score=121.90 Aligned_cols=98 Identities=16% Similarity=0.110 Sum_probs=80.3
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEcccccccccc
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKK 296 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~d 296 (460)
..+|||||||+|.++..+++++. ...++++|+ +.+++.|++. ..+.+..+|... ++++ ||+|++..++++|. +
T Consensus 210 ~~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~~~--~D~v~~~~~lh~~~-d 282 (372)
T 1fp1_D 210 ISTLVDVGGGSGRNLELIISKYP-LIKGINFDL-PQVIENAPPL-SGIEHVGGDMFA-SVPQ--GDAMILKAVCHNWS-D 282 (372)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCCC-TTEEEEECCTTT-CCCC--EEEEEEESSGGGSC-H
T ss_pred CCEEEEeCCCCcHHHHHHHHHCC-CCeEEEeCh-HHHHHhhhhc-CCCEEEeCCccc-CCCC--CCEEEEecccccCC-H
Confidence 37999999999999999999864 367889999 9999887653 346777777665 6654 99999999888884 5
Q ss_pred HH--HHHHHHHHhcCCCcEEEEEeCCC
Q 012571 297 EG--IFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 297 ~~--~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
.. .+|++++++|||||++++.+...
T Consensus 283 ~~~~~~l~~~~~~L~pgG~l~i~e~~~ 309 (372)
T 1fp1_D 283 EKCIEFLSNCHKALSPNGKVIIVEFIL 309 (372)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 54 79999999999999999997643
No 157
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.19 E-value=1e-10 Score=113.42 Aligned_cols=101 Identities=17% Similarity=0.107 Sum_probs=78.9
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCC---------CeEEEeecccCC-------CCCCCCc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGL---------PAMIGNFISRQL-------PYPSLSF 281 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl---------~~~~~~~d~~~L-------p~~~~sF 281 (460)
.+|||+|||+|.++..++++.. ...++++|+++.+++.|+++-. ++.+...|..++ ++++++|
T Consensus 38 ~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~f 116 (260)
T 2ozv_A 38 CRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEHF 116 (260)
T ss_dssp EEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTCE
T ss_pred CEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCCc
Confidence 6899999999999999998853 3689999999999999987622 266777777766 3567899
Q ss_pred cEEEEcccccc----------------c-cccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 282 DMVHCAQCGII----------------W-DKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 282 DlVvs~~~l~~----------------~-~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
|+|+++-.... . ......+++++.++|||||++++..+
T Consensus 117 D~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 117 HHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp EEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 99999721111 1 12356789999999999999999765
No 158
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.18 E-value=9.1e-12 Score=127.96 Aligned_cols=98 Identities=14% Similarity=0.074 Sum_probs=78.7
Q ss_pred CCeEEEeCCC------CchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCC------CCCccEE
Q 012571 217 VQSVLDVGCG------FGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYP------SLSFDMV 284 (460)
Q Consensus 217 ~~~VLDIGCG------tG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~------~~sFDlV 284 (460)
..+||||||| +|..+..++++......|+|+|+|+.|. ....++.+..+|..++++. +++||+|
T Consensus 217 ~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~----~~~~rI~fv~GDa~dlpf~~~l~~~d~sFDlV 292 (419)
T 3sso_A 217 QVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH----VDELRIRTIQGDQNDAEFLDRIARRYGPFDIV 292 (419)
T ss_dssp CCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG----GCBTTEEEEECCTTCHHHHHHHHHHHCCEEEE
T ss_pred CCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh----hcCCCcEEEEecccccchhhhhhcccCCccEE
Confidence 3799999999 7777777776533347899999999983 2345678888888888877 7899999
Q ss_pred EEccccccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 285 HCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 285 vs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
++.. .+++ .+...+|++++|+|||||++++.+..
T Consensus 293 isdg-sH~~-~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 293 IDDG-SHIN-AHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp EECS-CCCH-HHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred EECC-cccc-hhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 9974 4444 67778999999999999999999865
No 159
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.18 E-value=8.5e-11 Score=112.63 Aligned_cols=100 Identities=19% Similarity=0.203 Sum_probs=76.9
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc------------CC-CeEEEeecccC-CC--CCCCCc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER------------GL-PAMIGNFISRQ-LP--YPSLSF 281 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r------------gl-~~~~~~~d~~~-Lp--~~~~sF 281 (460)
.+|||||||+|.++..+++.+. ...++|+|+|+.+++.|+++ ++ ++.+..+|... ++ ++++++
T Consensus 51 ~~vLDiGcG~G~~~~~la~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~~ 129 (246)
T 2vdv_E 51 VTIADIGCGFGGLMIDLSPAFP-EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQL 129 (246)
T ss_dssp EEEEEETCTTSHHHHHHHHHST-TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTCE
T ss_pred CEEEEEcCCCCHHHHHHHHhCC-CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccccc
Confidence 6899999999999999998864 36899999999999988653 33 56677777765 55 778899
Q ss_pred cEEEEcccccccccc--------HHHHHHHHHHhcCCCcEEEEEeC
Q 012571 282 DMVHCAQCGIIWDKK--------EGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 282 DlVvs~~~l~~~~~d--------~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
|.|+..+. -.|... ...++.++.++|||||.|++...
T Consensus 130 d~v~~~~p-~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td 174 (246)
T 2vdv_E 130 SKMFFCFP-DPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITD 174 (246)
T ss_dssp EEEEEESC-CCC------CSSCCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred CEEEEECC-CcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEec
Confidence 99986541 122110 03699999999999999999654
No 160
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.18 E-value=2.3e-10 Score=111.37 Aligned_cols=116 Identities=19% Similarity=0.181 Sum_probs=87.5
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccCCCCCCCCccEEEEccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~ 291 (460)
.+|||+|||+|.++..+++.-.....++++|+++.+++.|+++ ++ .+.+...|..+. +++++||+|++..
T Consensus 114 ~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~V~~~~--- 189 (277)
T 1o54_A 114 DRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDEKDVDALFLDV--- 189 (277)
T ss_dssp CEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCCSEEEEEECC---
T ss_pred CEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCCccCEEEECC---
Confidence 7999999999999999998721236899999999999998776 43 466766666665 6678899999842
Q ss_pred cccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEEEe
Q 012571 292 IWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIA 352 (460)
Q Consensus 292 ~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~~~ 352 (460)
+++..++.++.++|||||.+++..+.. .....+....++.+|..+.
T Consensus 190 ---~~~~~~l~~~~~~L~pgG~l~~~~~~~------------~~~~~~~~~l~~~gf~~~~ 235 (277)
T 1o54_A 190 ---PDPWNYIDKCWEALKGGGRFATVCPTT------------NQVQETLKKLQELPFIRIE 235 (277)
T ss_dssp ---SCGGGTHHHHHHHEEEEEEEEEEESSH------------HHHHHHHHHHHHSSEEEEE
T ss_pred ---cCHHHHHHHHHHHcCCCCEEEEEeCCH------------HHHHHHHHHHHHCCCceeE
Confidence 455568999999999999999998732 1233344445557776543
No 161
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.18 E-value=2.5e-10 Score=113.99 Aligned_cols=136 Identities=15% Similarity=0.153 Sum_probs=94.3
Q ss_pred HHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEeecccC
Q 012571 199 QIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQ 273 (460)
Q Consensus 199 ~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl-~~~~~~~d~~~ 273 (460)
.+...+....+ .+|||+|||+|..+..+++.......++++|+++.+++.++++ ++ ++.+...|...
T Consensus 109 l~~~~l~~~~g--------~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~ 180 (315)
T 1ixk_A 109 YPPVALDPKPG--------EIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLH 180 (315)
T ss_dssp HHHHHHCCCTT--------CEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGG
T ss_pred HHHHHhCCCCC--------CEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhh
Confidence 34455555554 7999999999999999998633336899999999999988765 55 56777777777
Q ss_pred CCCCCCCccEEEEcc-----cccccccc----------------HHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhh
Q 012571 274 LPYPSLSFDMVHCAQ-----CGIIWDKK----------------EGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKN 332 (460)
Q Consensus 274 Lp~~~~sFDlVvs~~-----~l~~~~~d----------------~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~ 332 (460)
++..+++||+|++.- ..++-.++ ...+|+++.++|||||++++++...... +.
T Consensus 181 ~~~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~------En 254 (315)
T 1ixk_A 181 IGELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPE------EN 254 (315)
T ss_dssp GGGGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGG------GT
T ss_pred cccccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChH------Hh
Confidence 665567899999841 11111111 1468999999999999999988643221 21
Q ss_pred hHHHHHHHHHHHHhCeEEE
Q 012571 333 KSLLKVMEEFTEKICWSLI 351 (460)
Q Consensus 333 ~~~w~~i~~l~~~~~w~~~ 351 (460)
-..+..+.++.+|+.+
T Consensus 255 ---e~~v~~~l~~~~~~~~ 270 (315)
T 1ixk_A 255 ---EFVIQWALDNFDVELL 270 (315)
T ss_dssp ---HHHHHHHHHHSSEEEE
T ss_pred ---HHHHHHHHhcCCCEEe
Confidence 1234555666777664
No 162
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.18 E-value=3.5e-12 Score=121.18 Aligned_cols=96 Identities=16% Similarity=0.101 Sum_probs=78.7
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccCCCCCCCCccEEEEccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~ 291 (460)
.+|||+|||+|.++..+++.+ ..++|+|+|+.+++.|+++ ++ .+.+..+|...++ ++++||+|++.....
T Consensus 80 ~~vLD~gcG~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~ 155 (241)
T 3gdh_A 80 DVVVDAFCGVGGNTIQFALTG---MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPWG 155 (241)
T ss_dssp SEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCCS
T ss_pred CEEEECccccCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCcC
Confidence 789999999999999999986 6899999999999988765 44 5777777777766 568999999987544
Q ss_pred cccccHHHHHHHHHHhcCCCcEEEEEe
Q 012571 292 IWDKKEGIFLIEADRLLKPGGYFVLTS 318 (460)
Q Consensus 292 ~~~~d~~~~L~ei~RvLkPGG~lvl~~ 318 (460)
+. .+....+.+++++|+|||.+++..
T Consensus 156 ~~-~~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 156 GP-DYATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp SG-GGGGSSSBCTTTSCSSCHHHHHHH
T ss_pred Cc-chhhhHHHHHHhhcCCcceeHHHH
Confidence 44 455557788999999999976654
No 163
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.18 E-value=2.8e-11 Score=115.96 Aligned_cols=98 Identities=14% Similarity=0.104 Sum_probs=77.5
Q ss_pred CeEEEeCCCCchHHHHHHhc---cCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCC---CCCC-CCccEEEEcccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSL---KLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQL---PYPS-LSFDMVHCAQCG 290 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~---g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~L---p~~~-~sFDlVvs~~~l 290 (460)
.+|||||||+|..+..|++. .....+|+++|+++.|++.|+....++.+..+|.... ++.+ .+||+|++...
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~~- 161 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDNA- 161 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEESS-
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECCc-
Confidence 68999999999999999886 1123689999999999988864445677777777663 5433 47999998643
Q ss_pred ccccccHHHHHHHHHH-hcCCCcEEEEEeC
Q 012571 291 IIWDKKEGIFLIEADR-LLKPGGYFVLTSP 319 (460)
Q Consensus 291 ~~~~~d~~~~L~ei~R-vLkPGG~lvl~~~ 319 (460)
| .+...++.++.| +|||||++++.+.
T Consensus 162 -~--~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 162 -H--ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp -C--SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred -h--HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 3 356679999998 9999999999875
No 164
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.18 E-value=5.7e-11 Score=113.77 Aligned_cols=130 Identities=12% Similarity=0.122 Sum_probs=82.8
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEe-ecccCC---CCCCCCccEEEEccccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGN-FISRQL---PYPSLSFDMVHCAQCGIIW 293 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~-~d~~~L---p~~~~sFDlVvs~~~l~~~ 293 (460)
.+|||||||+|.++..+++++. ..++|+|+|+.|++.|+++...+.... .+...+ .++...||.+.+..++.+.
T Consensus 39 ~~VLDiGcGtG~~t~~la~~g~--~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~~l 116 (232)
T 3opn_A 39 KTCLDIGSSTGGFTDVMLQNGA--KLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFISL 116 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC--SEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSSSCG
T ss_pred CEEEEEccCCCHHHHHHHhcCC--CEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEhhhH
Confidence 6899999999999999999863 489999999999999887654433211 111111 1111224544443322222
Q ss_pred cccHHHHHHHHHHhcCCCcEEEEEeCCCCCC--------CCC-CchhhhHHHHHHHHHHHHhCeEEEee
Q 012571 294 DKKEGIFLIEADRLLKPGGYFVLTSPESKPR--------GSS-SSRKNKSLLKVMEEFTEKICWSLIAQ 353 (460)
Q Consensus 294 ~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~--------~~~-~~~e~~~~w~~i~~l~~~~~w~~~~~ 353 (460)
..++.+++|+|||||++++...+.... +.. .+..+....+++..+.++.+|++...
T Consensus 117 ----~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~ 181 (232)
T 3opn_A 117 ----DLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGL 181 (232)
T ss_dssp ----GGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEE
T ss_pred ----HHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEE
Confidence 458999999999999999974211000 000 11123345567788889999987654
No 165
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.18 E-value=2.6e-10 Score=111.79 Aligned_cols=99 Identities=13% Similarity=0.045 Sum_probs=74.5
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeC-CHHHHHHHHHcC---------C------CeEEEeecccCCC--C---
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEA-TGSQVQLALERG---------L------PAMIGNFISRQLP--Y--- 276 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~-s~~~l~~A~~rg---------l------~~~~~~~d~~~Lp--~--- 276 (460)
.+|||||||+|.++..+++.+. ..++++|+ ++.+++.|+++. + .+.+..++..... +
T Consensus 81 ~~vLDlG~G~G~~~~~~a~~~~--~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 158 (281)
T 3bzb_A 81 KTVCELGAGAGLVSIVAFLAGA--DQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRC 158 (281)
T ss_dssp CEEEETTCTTSHHHHHHHHTTC--SEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHH
T ss_pred CeEEEecccccHHHHHHHHcCC--CEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhh
Confidence 6899999999999999988763 48999999 899999887642 1 2333333222110 1
Q ss_pred -CCCCccEEEEccccccccccHHHHHHHHHHhcC---C--CcEEEEEeC
Q 012571 277 -PSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLK---P--GGYFVLTSP 319 (460)
Q Consensus 277 -~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLk---P--GG~lvl~~~ 319 (460)
++++||+|+++.++++. ++...+++++.++|| | ||.+++...
T Consensus 159 ~~~~~fD~Ii~~dvl~~~-~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~ 206 (281)
T 3bzb_A 159 TGLQRFQVVLLADLLSFH-QAHDALLRSVKMLLALPANDPTAVALVTFT 206 (281)
T ss_dssp HSCSSBSEEEEESCCSCG-GGHHHHHHHHHHHBCCTTTCTTCEEEEEEC
T ss_pred ccCCCCCEEEEeCcccCh-HHHHHHHHHHHHHhcccCCCCCCEEEEEEE
Confidence 35789999998876665 677889999999999 9 998877543
No 166
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.17 E-value=1.3e-10 Score=111.75 Aligned_cols=100 Identities=18% Similarity=0.141 Sum_probs=77.8
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccC-CCCC--CCCccEEEEcc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQ-LPYP--SLSFDMVHCAQ 288 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~-Lp~~--~~sFDlVvs~~ 288 (460)
.+|||||||+|..+..+++......+++++|+++.+++.|+++ ++ .+.+..+|..+ ++.. .++||+|++..
T Consensus 65 ~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~d~ 144 (248)
T 3tfw_A 65 KRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFIDA 144 (248)
T ss_dssp SEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEECS
T ss_pred CEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEECC
Confidence 7999999999999999998743247899999999999998876 44 36677666544 3322 35899999853
Q ss_pred ccccccccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 289 CGIIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 289 ~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
...+...+++++.++|||||++++.+...
T Consensus 145 ----~~~~~~~~l~~~~~~LkpGG~lv~~~~~~ 173 (248)
T 3tfw_A 145 ----DKPNNPHYLRWALRYSRPGTLIIGDNVVR 173 (248)
T ss_dssp ----CGGGHHHHHHHHHHTCCTTCEEEEECCSG
T ss_pred ----chHHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 22445569999999999999999987643
No 167
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.17 E-value=1.8e-10 Score=112.16 Aligned_cols=118 Identities=15% Similarity=0.110 Sum_probs=84.9
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEeecccCCCCCCCCccEEEEccccc-
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQLPYPSLSFDMVHCAQCGI- 291 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl-~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~- 291 (460)
.+|||+|||+|.++..+++.. ...+++++|+|+.+++.|+++ ++ ++.+...|... ++++++||+|+++...+
T Consensus 111 ~~vLDlG~GsG~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~-~~~~~~fD~Iv~npPy~~ 188 (276)
T 2b3t_A 111 CRILDLGTGTGAIALALASER-PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFS-ALAGQQFAMIVSNPPYID 188 (276)
T ss_dssp CEEEEETCTTSHHHHHHHHHC-TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTG-GGTTCCEEEEEECCCCBC
T ss_pred CEEEEecCCccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhh-hcccCCccEEEECCCCCC
Confidence 689999999999999999763 236899999999999998765 44 46677666654 24467899999973211
Q ss_pred ------------ccc-----------ccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCe
Q 012571 292 ------------IWD-----------KKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICW 348 (460)
Q Consensus 292 ------------~~~-----------~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w 348 (460)
+.+ .....++.++.++|||||++++..... . -+.+..+.++.+|
T Consensus 189 ~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~----------~---~~~~~~~l~~~Gf 255 (276)
T 2b3t_A 189 EQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQ----------Q---GEAVRQAFILAGY 255 (276)
T ss_dssp TTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSS----------C---HHHHHHHHHHTTC
T ss_pred ccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECch----------H---HHHHHHHHHHCCC
Confidence 111 233568999999999999999975421 1 2334555666677
Q ss_pred EE
Q 012571 349 SL 350 (460)
Q Consensus 349 ~~ 350 (460)
+.
T Consensus 256 ~~ 257 (276)
T 2b3t_A 256 HD 257 (276)
T ss_dssp TT
T ss_pred cE
Confidence 54
No 168
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.16 E-value=7.8e-11 Score=111.77 Aligned_cols=99 Identities=13% Similarity=0.092 Sum_probs=76.6
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCC---eEEEeecccCC-C-CCCCCccEEEEcc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP---AMIGNFISRQL-P-YPSLSFDMVHCAQ 288 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~---~~~~~~d~~~L-p-~~~~sFDlVvs~~ 288 (460)
.+|||||||+|..+..+++.-.....++++|+++.+++.|+++ ++. +.+..+|..+. + +++++||+|++..
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~ 137 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQV 137 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECC
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcC
Confidence 4899999999999999998633346899999999999998765 443 66776665443 2 3368999999863
Q ss_pred ccccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 289 CGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 289 ~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
. ..+...+++++.++|||||++++.+..
T Consensus 138 ~----~~~~~~~l~~~~~~LkpGG~lv~dn~~ 165 (221)
T 3dr5_A 138 S----PMDLKALVDAAWPLLRRGGALVLADAL 165 (221)
T ss_dssp C----TTTHHHHHHHHHHHEEEEEEEEETTTT
T ss_pred c----HHHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 2 234556899999999999999986553
No 169
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.16 E-value=2.3e-10 Score=107.69 Aligned_cols=98 Identities=15% Similarity=0.066 Sum_probs=72.5
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc---CCCeEEEeecccCC---CCCCCCccEEEEccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER---GLPAMIGNFISRQL---PYPSLSFDMVHCAQCGI 291 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r---gl~~~~~~~d~~~L---p~~~~sFDlVvs~~~l~ 291 (460)
.+|||+|||+|.++..+++.......++++|+++.+++.++++ ...+.+...|.... ...+++||+|++...
T Consensus 75 ~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~-- 152 (227)
T 1g8a_A 75 KSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVA-- 152 (227)
T ss_dssp CEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECCC--
T ss_pred CEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEECCC--
Confidence 7899999999999999998721225899999999988877654 23566666666552 112468999998642
Q ss_pred cccccHHHHHHHHHHhcCCCcEEEEEe
Q 012571 292 IWDKKEGIFLIEADRLLKPGGYFVLTS 318 (460)
Q Consensus 292 ~~~~d~~~~L~ei~RvLkPGG~lvl~~ 318 (460)
.......++.++.++|||||++++..
T Consensus 153 -~~~~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 153 -QPTQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp -STTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -CHhHHHHHHHHHHHhcCCCCEEEEEE
Confidence 22223345999999999999999983
No 170
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.16 E-value=1.1e-10 Score=110.95 Aligned_cols=98 Identities=16% Similarity=0.206 Sum_probs=77.7
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccCC-C-CCCCCccEEEEccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQL-P-YPSLSFDMVHCAQC 289 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~L-p-~~~~sFDlVvs~~~ 289 (460)
.+|||||||+|.++..+++.. ....++++|+++.+++.|+++ ++ ++.+...|..+. + ..+++||+|++...
T Consensus 73 ~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~ 151 (232)
T 3ntv_A 73 KNILEIGTAIGYSSMQFASIS-DDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDAA 151 (232)
T ss_dssp CEEEEECCSSSHHHHHHHTTC-TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEETT
T ss_pred CEEEEEeCchhHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcCc
Confidence 799999999999999999853 247899999999999998765 43 467777776553 3 33689999997632
Q ss_pred cccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 290 GIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 290 l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
..+...+++++.++|||||++++.+..
T Consensus 152 ----~~~~~~~l~~~~~~LkpgG~lv~d~~~ 178 (232)
T 3ntv_A 152 ----KAQSKKFFEIYTPLLKHQGLVITDNVL 178 (232)
T ss_dssp ----SSSHHHHHHHHGGGEEEEEEEEEECTT
T ss_pred ----HHHHHHHHHHHHHhcCCCeEEEEeeCC
Confidence 245567999999999999999886553
No 171
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.16 E-value=1.5e-10 Score=108.89 Aligned_cols=96 Identities=20% Similarity=0.110 Sum_probs=77.1
Q ss_pred CeEEEeCCCCchHHHHHHhccC----ceeEEEEeeCCHHHHHHHHHc----C------CCeEEEeecccCCC----CCCC
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKL----MAVCVAVYEATGSQVQLALER----G------LPAMIGNFISRQLP----YPSL 279 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~----~~~~v~giD~s~~~l~~A~~r----g------l~~~~~~~d~~~Lp----~~~~ 279 (460)
.+|||||||+|.++..+++... ...+++++|+++.+++.|+++ + ..+.+...|..... ..++
T Consensus 82 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 161 (227)
T 2pbf_A 82 SRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKELG 161 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHHHC
T ss_pred CEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCccCC
Confidence 7999999999999999998743 235899999999999998776 3 25677777776654 4567
Q ss_pred CccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 280 SFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 280 sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
+||+|++...+.++ +.++.++|||||++++..+.
T Consensus 162 ~fD~I~~~~~~~~~-------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 162 LFDAIHVGASASEL-------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp CEEEEEECSBBSSC-------CHHHHHHEEEEEEEEEEEEE
T ss_pred CcCEEEECCchHHH-------HHHHHHhcCCCcEEEEEEcc
Confidence 89999998754443 47889999999999998764
No 172
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.15 E-value=1.4e-10 Score=110.14 Aligned_cols=109 Identities=17% Similarity=0.161 Sum_probs=82.8
Q ss_pred HHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEee
Q 012571 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNF 269 (460)
Q Consensus 195 ~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl-~~~~~~~ 269 (460)
.....+.+.+....+ .+|||||||+|.++..+++.+. .+++++|+++.+++.|+++ ++ .+.+...
T Consensus 78 ~~~~~~~~~l~~~~~--------~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~ 147 (235)
T 1jg1_A 78 HMVAIMLEIANLKPG--------MNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKNVHVILG 147 (235)
T ss_dssp HHHHHHHHHHTCCTT--------CCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred HHHHHHHHhcCCCCC--------CEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEC
Confidence 455566666665544 7899999999999999998853 5799999999999998875 33 3556666
Q ss_pred cccCCCCCCC-CccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 270 ISRQLPYPSL-SFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 270 d~~~Lp~~~~-sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
|. ..+++++ .||+|++..++.++. .++.++|||||.+++..+..
T Consensus 148 d~-~~~~~~~~~fD~Ii~~~~~~~~~-------~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 148 DG-SKGFPPKAPYDVIIVTAGAPKIP-------EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp CG-GGCCGGGCCEEEEEECSBBSSCC-------HHHHHTEEEEEEEEEEECSS
T ss_pred Cc-ccCCCCCCCccEEEECCcHHHHH-------HHHHHhcCCCcEEEEEEecC
Confidence 54 3445444 499999987655553 37899999999999998754
No 173
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.15 E-value=1.4e-10 Score=118.73 Aligned_cols=114 Identities=16% Similarity=0.130 Sum_probs=84.3
Q ss_pred HHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC----CeEEE
Q 012571 196 YSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL----PAMIG 267 (460)
Q Consensus 196 ~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl----~~~~~ 267 (460)
-.+.+.+.+....+ .+|||+|||+|.++..+++.+. ..+++++|+|+.+++.|+++ ++ .+.+.
T Consensus 210 ~~~~ll~~l~~~~~--------~~VLDlGcG~G~~s~~la~~~p-~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~ 280 (375)
T 4dcm_A 210 GARFFMQHLPENLE--------GEIVDLGCGNGVIGLTLLDKNP-QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFM 280 (375)
T ss_dssp HHHHHHHTCCCSCC--------SEEEEETCTTCHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEE
T ss_pred HHHHHHHhCcccCC--------CeEEEEeCcchHHHHHHHHHCC-CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEE
Confidence 34445555554333 7899999999999999999852 36899999999999988765 32 35566
Q ss_pred eecccCCCCCCCCccEEEEccccccc---ccc-HHHHHHHHHHhcCCCcEEEEEeC
Q 012571 268 NFISRQLPYPSLSFDMVHCAQCGIIW---DKK-EGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 268 ~~d~~~Lp~~~~sFDlVvs~~~l~~~---~~d-~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
..|... ++++++||+|+++..+++. ... ...+++++.++|||||.+++...
T Consensus 281 ~~D~~~-~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n 335 (375)
T 4dcm_A 281 INNALS-GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVAN 335 (375)
T ss_dssp ECSTTT-TCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred echhhc-cCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 666655 5677899999998654432 112 23589999999999999999875
No 174
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.15 E-value=1.5e-10 Score=120.55 Aligned_cols=116 Identities=12% Similarity=0.025 Sum_probs=83.2
Q ss_pred HHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHH-------HHc----C--
Q 012571 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLA-------LER----G-- 261 (460)
Q Consensus 195 ~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A-------~~r----g-- 261 (460)
.....+.+.+....+ .+|||||||+|.++..+++... ...++|+|+++.+++.| +++ |
T Consensus 229 ~~v~~ml~~l~l~~g--------~~VLDLGCGsG~la~~LA~~~g-~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~ 299 (433)
T 1u2z_A 229 NFLSDVYQQCQLKKG--------DTFMDLGSGVGNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELKKRCKLYGMR 299 (433)
T ss_dssp HHHHHHHHHTTCCTT--------CEEEEESCTTSHHHHHHHHHHC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHHHHHhcCCCCC--------CEEEEeCCCcCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCC
Confidence 344555555554443 7999999999999999998632 24799999999998887 543 4
Q ss_pred -CCeEEEeecccCC--CC--CCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 262 -LPAMIGNFISRQL--PY--PSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 262 -l~~~~~~~d~~~L--p~--~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
.++.+..+|.... ++ ..++||+|+++..+ +.++...+|+++.++|||||.+++.++..
T Consensus 300 ~~nV~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l--~~~d~~~~L~el~r~LKpGG~lVi~d~f~ 362 (433)
T 1u2z_A 300 LNNVEFSLKKSFVDNNRVAELIPQCDVILVNNFL--FDEDLNKKVEKILQTAKVGCKIISLKSLR 362 (433)
T ss_dssp CCCEEEEESSCSTTCHHHHHHGGGCSEEEECCTT--CCHHHHHHHHHHHTTCCTTCEEEESSCSS
T ss_pred CCceEEEEcCccccccccccccCCCCEEEEeCcc--ccccHHHHHHHHHHhCCCCeEEEEeeccC
Confidence 2455655433221 12 24789999987544 33567778999999999999999987654
No 175
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.15 E-value=1.4e-10 Score=111.08 Aligned_cols=102 Identities=16% Similarity=0.010 Sum_probs=74.8
Q ss_pred CeEEEeCCCCchHHHHHHhc--cCceeEEEEeeCCHHHHHHHHHc--CC-------C-----------------------
Q 012571 218 QSVLDVGCGFGSFGAHLVSL--KLMAVCVAVYEATGSQVQLALER--GL-------P----------------------- 263 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~--g~~~~~v~giD~s~~~l~~A~~r--gl-------~----------------------- 263 (460)
.+|||+|||+|.++..+++. . ...+++|+|+|+.+++.|+++ .. .
T Consensus 53 ~~vLD~gcGsG~~~~~la~~~~~-~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (250)
T 1o9g_A 53 VTLWDPCCGSGYLLTVLGLLHRR-SLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQAA 131 (250)
T ss_dssp EEEEETTCTTSHHHHHHHHHTGG-GEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred CeEEECCCCCCHHHHHHHHHhcc-CCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhhh
Confidence 68999999999999999876 2 236899999999999998754 11 1
Q ss_pred --eE-------------EEeecccCCCC-----CCCCccEEEEcccccccc--------ccHHHHHHHHHHhcCCCcEEE
Q 012571 264 --AM-------------IGNFISRQLPY-----PSLSFDMVHCAQCGIIWD--------KKEGIFLIEADRLLKPGGYFV 315 (460)
Q Consensus 264 --~~-------------~~~~d~~~Lp~-----~~~sFDlVvs~~~l~~~~--------~d~~~~L~ei~RvLkPGG~lv 315 (460)
+. +...|...... ..++||+|+|+....+.. +....+++++.++|||||+++
T Consensus 132 ~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 211 (250)
T 1o9g_A 132 RRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIA 211 (250)
T ss_dssp HHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred hhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEE
Confidence 33 55566554221 345899999975433332 223478999999999999999
Q ss_pred EEeCC
Q 012571 316 LTSPE 320 (460)
Q Consensus 316 l~~~~ 320 (460)
++...
T Consensus 212 ~~~~~ 216 (250)
T 1o9g_A 212 VTDRS 216 (250)
T ss_dssp EEESS
T ss_pred EeCcc
Confidence 96543
No 176
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.15 E-value=8.9e-11 Score=118.50 Aligned_cols=98 Identities=14% Similarity=0.097 Sum_probs=80.1
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEcccccccccc
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKK 296 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~d 296 (460)
..+|||||||+|.++..++++.. ..+++++|+ +.+++.|++.. .+.+...|... ++++ ||+|++..++++|. +
T Consensus 189 ~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~-~v~~~~~d~~~-~~p~--~D~v~~~~~lh~~~-d 261 (352)
T 1fp2_A 189 LESIVDVGGGTGTTAKIICETFP-KLKCIVFDR-PQVVENLSGSN-NLTYVGGDMFT-SIPN--ADAVLLKYILHNWT-D 261 (352)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCCBT-TEEEEECCTTT-CCCC--CSEEEEESCGGGSC-H
T ss_pred CceEEEeCCCccHHHHHHHHHCC-CCeEEEeeC-HHHHhhcccCC-CcEEEeccccC-CCCC--ccEEEeehhhccCC-H
Confidence 37999999999999999998743 358999999 99998886542 36677676654 5553 99999999888884 4
Q ss_pred HH--HHHHHHHHhcCC---CcEEEEEeCCC
Q 012571 297 EG--IFLIEADRLLKP---GGYFVLTSPES 321 (460)
Q Consensus 297 ~~--~~L~ei~RvLkP---GG~lvl~~~~~ 321 (460)
.. .+|++++++||| ||++++.+...
T Consensus 262 ~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 291 (352)
T 1fp2_A 262 KDCLRILKKCKEAVTNDGKRGKVTIIDMVI 291 (352)
T ss_dssp HHHHHHHHHHHHHHSGGGCCCEEEEEECEE
T ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEEEeec
Confidence 44 799999999999 99999998754
No 177
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.15 E-value=3e-10 Score=112.94 Aligned_cols=125 Identities=15% Similarity=0.141 Sum_probs=87.9
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcC---------CCeEEEeecccCCCC--CCCCccEEE
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---------LPAMIGNFISRQLPY--PSLSFDMVH 285 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rg---------l~~~~~~~d~~~Lp~--~~~sFDlVv 285 (460)
..+|||||||+|.++..+++.. ...+++++|+++.+++.|+++. .++.+...|...++. ++++||+|+
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi 174 (304)
T 3bwc_A 96 PERVLIIGGGDGGVLREVLRHG-TVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVI 174 (304)
T ss_dssp CCEEEEEECTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEE
T ss_pred CCeEEEEcCCCCHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEE
Confidence 3799999999999999999873 2368999999999999998753 346676666655443 478999999
Q ss_pred EccccccccccH----HHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEEE
Q 012571 286 CAQCGIIWDKKE----GIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLI 351 (460)
Q Consensus 286 s~~~l~~~~~d~----~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~~ 351 (460)
+... .+..+.. ..+++++.++|||||.+++...... ........+....++.+|..+
T Consensus 175 ~d~~-~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~--------~~~~~~~~~~~~l~~~GF~~v 235 (304)
T 3bwc_A 175 IDTT-DPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIW--------LDLELIEKMSRFIRETGFASV 235 (304)
T ss_dssp EECC----------CCHHHHHHHHHHEEEEEEEEEEECCTT--------TCHHHHHHHHHHHHHHTCSEE
T ss_pred ECCC-CccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcc--------cchHHHHHHHHHHHhCCCCcE
Confidence 9643 3332221 4689999999999999999865321 112234445556666777654
No 178
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.14 E-value=2.6e-10 Score=108.26 Aligned_cols=105 Identities=21% Similarity=0.202 Sum_probs=82.6
Q ss_pred HHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeeccc
Q 012571 199 QIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISR 272 (460)
Q Consensus 199 ~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~ 272 (460)
.+.+.+....+ .+|||+|||+|.++..+++.+ .+++++|+++.+++.|+++ ++ .+.+...|..
T Consensus 82 ~~~~~~~~~~~--------~~vldiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 150 (248)
T 2yvl_A 82 YIALKLNLNKE--------KRVLEFGTGSGALLAVLSEVA---GEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFK 150 (248)
T ss_dssp HHHHHTTCCTT--------CEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTT
T ss_pred HHHHhcCCCCC--------CEEEEeCCCccHHHHHHHHhC---CEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChh
Confidence 44555554444 799999999999999999873 6899999999999998875 33 5667666666
Q ss_pred CCCCCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 273 QLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 273 ~Lp~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
+...++++||+|++.. +++..+++++.++|||||.+++..+.
T Consensus 151 ~~~~~~~~~D~v~~~~------~~~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 151 DAEVPEGIFHAAFVDV------REPWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp TSCCCTTCBSEEEECS------SCGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred hcccCCCcccEEEECC------cCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 6443567899999842 35556899999999999999999873
No 179
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.13 E-value=1.1e-10 Score=117.06 Aligned_cols=109 Identities=20% Similarity=0.120 Sum_probs=79.8
Q ss_pred HHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcC---------------
Q 012571 197 SRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG--------------- 261 (460)
Q Consensus 197 ~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rg--------------- 261 (460)
...+.+.+...++ .+|||+|||+|.++..+++.......++++|+++.+++.|+++.
T Consensus 94 ~~~~l~~l~~~~g--------~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~ 165 (336)
T 2b25_A 94 INMILSMMDINPG--------DTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEW 165 (336)
T ss_dssp HHHHHHHHTCCTT--------CEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCC
T ss_pred HHHHHHhcCCCCC--------CEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhccccccccccc
Confidence 4455556655554 79999999999999999987222368999999999999987641
Q ss_pred -CCeEEEeecccCC--CCCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 262 -LPAMIGNFISRQL--PYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 262 -l~~~~~~~d~~~L--p~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
..+.+...|..+. ++++++||+|++.. . ++..++.++.++|||||.+++..+
T Consensus 166 ~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~-~-----~~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 166 PDNVDFIHKDISGATEDIKSLTFDAVALDM-L-----NPHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp CCCEEEEESCTTCCC-------EEEEEECS-S-----STTTTHHHHGGGEEEEEEEEEEES
T ss_pred CCceEEEECChHHcccccCCCCeeEEEECC-C-----CHHHHHHHHHHhcCCCcEEEEEeC
Confidence 3567777777665 46677899999863 2 223389999999999999999887
No 180
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.12 E-value=1.7e-10 Score=107.39 Aligned_cols=97 Identities=14% Similarity=0.069 Sum_probs=75.7
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccCC-CCCCCCccEEEEcccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQL-PYPSLSFDMVHCAQCG 290 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~L-p~~~~sFDlVvs~~~l 290 (460)
.+|||||||+|..+..+++......+++++|+++.+++.|+++ ++ .+.+..+|..+. +..++ ||+|++...
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~~- 135 (210)
T 3c3p_A 58 QLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDCD- 135 (210)
T ss_dssp SEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEETT-
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcCC-
Confidence 6899999999999999998733246899999999999998765 33 356666665443 44456 999998631
Q ss_pred ccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 291 ~~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
..+...+++++.++|||||++++.+.
T Consensus 136 ---~~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 136 ---VFNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp ---TSCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred ---hhhhHHHHHHHHHhcCCCeEEEEECc
Confidence 24566799999999999999998765
No 181
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.11 E-value=2.4e-10 Score=107.12 Aligned_cols=100 Identities=15% Similarity=0.125 Sum_probs=76.3
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccCC-C-CC---CCCccEEEE
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQL-P-YP---SLSFDMVHC 286 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~L-p-~~---~~sFDlVvs 286 (460)
.+|||||||+|.++..+++......+++++|+++.+++.|+++ ++ .+.+..+|..+. + ++ .++||+|++
T Consensus 60 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v~~ 139 (223)
T 3duw_A 60 RNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFIFI 139 (223)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEEEE
T ss_pred CEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEEEE
Confidence 7899999999999999998743246899999999999988765 44 366666665432 1 11 267999998
Q ss_pred ccccccccccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 287 AQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 287 ~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
... ......++.++.++|||||++++.+...
T Consensus 140 d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 170 (223)
T 3duw_A 140 DAD----KQNNPAYFEWALKLSRPGTVIIGDNVVR 170 (223)
T ss_dssp CSC----GGGHHHHHHHHHHTCCTTCEEEEESCSG
T ss_pred cCC----cHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 642 2344579999999999999999877643
No 182
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.11 E-value=2.1e-10 Score=108.58 Aligned_cols=98 Identities=15% Similarity=0.155 Sum_probs=78.1
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccCC-CCC--CCCccEEEEcc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQL-PYP--SLSFDMVHCAQ 288 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~L-p~~--~~sFDlVvs~~ 288 (460)
.+|||||||+|.++..+++... ..+++++|+++.+++.|+++ ++ .+.+...|.... +.. +++||+|++..
T Consensus 56 ~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~ 134 (233)
T 2gpy_A 56 ARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFIDA 134 (233)
T ss_dssp SEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEEG
T ss_pred CEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEECC
Confidence 7899999999999999998742 36899999999999999876 44 467776666553 322 57899999875
Q ss_pred ccccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 289 CGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 289 ~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
.. .+...+++++.++|||||.+++.+..
T Consensus 135 ~~----~~~~~~l~~~~~~L~pgG~lv~~~~~ 162 (233)
T 2gpy_A 135 AK----GQYRRFFDMYSPMVRPGGLILSDNVL 162 (233)
T ss_dssp GG----SCHHHHHHHHGGGEEEEEEEEEETTT
T ss_pred CH----HHHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 32 35667999999999999999998653
No 183
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.11 E-value=1.4e-10 Score=113.78 Aligned_cols=121 Identities=11% Similarity=0.065 Sum_probs=81.9
Q ss_pred hHHHHHHHHHHccCCCchhhccCCCeEEEeCCCC--chHHHHHHhccCceeEEEEeeCCHHHHHHHHHc--C---CCeEE
Q 012571 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGF--GSFGAHLVSLKLMAVCVAVYEATGSQVQLALER--G---LPAMI 266 (460)
Q Consensus 194 ~~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGt--G~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r--g---l~~~~ 266 (460)
..+.....+.+.... ++++|||||||+ +.++..++++.....+|+++|.|+.|++.|+++ + ..+.+
T Consensus 63 r~fl~rav~~l~~~~-------g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~ 135 (277)
T 3giw_A 63 RDWMNRAVAHLAKEA-------GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAY 135 (277)
T ss_dssp HHHHHHHHHHHHHTS-------CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEE
T ss_pred HHHHHHHHHHhcccc-------CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEE
Confidence 344555555554222 357999999997 444555554422347899999999999999876 2 13677
Q ss_pred EeecccCCC----CC--CCCcc-----EEEEcccccccccc--HHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 267 GNFISRQLP----YP--SLSFD-----MVHCAQCGIIWDKK--EGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 267 ~~~d~~~Lp----~~--~~sFD-----lVvs~~~l~~~~~d--~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
..+|..+++ .+ .++|| .|+++.+++++.++ +..+++++.+.|+|||+|++++...
T Consensus 136 v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 136 VEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTA 203 (277)
T ss_dssp EECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECC
T ss_pred EEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccC
Confidence 777776642 11 34565 57777655544332 4679999999999999999998654
No 184
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.10 E-value=1.3e-10 Score=108.92 Aligned_cols=100 Identities=15% Similarity=0.167 Sum_probs=76.7
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccCC-C-CC----CCCccEEE
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQL-P-YP----SLSFDMVH 285 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~L-p-~~----~~sFDlVv 285 (460)
.+|||||||+|..+..+++......+++++|+++.+++.|+++ ++ .+.+..+|..+. + +. .++||+|+
T Consensus 66 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v~ 145 (225)
T 3tr6_A 66 KKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLIY 145 (225)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEEE
T ss_pred CEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEEE
Confidence 6899999999999999998733247899999999999998765 43 366666665332 2 11 17899999
Q ss_pred EccccccccccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 286 CAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 286 s~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
+.. ...+...+++++.++|||||++++.+...
T Consensus 146 ~~~----~~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 146 IDA----DKANTDLYYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp ECS----CGGGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred ECC----CHHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 653 23456679999999999999999987643
No 185
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.10 E-value=1.8e-09 Score=109.32 Aligned_cols=132 Identities=14% Similarity=0.084 Sum_probs=94.9
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc-----CCCeEEEeecccCCCCCCCCccEEEEccccc
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER-----GLPAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r-----gl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~ 291 (460)
..+|||||||+|.++..++++.+. .+++..|. +.+++.|+++ .-++.+..+|....|.+ .+|+|++.++++
T Consensus 180 ~~~v~DvGgG~G~~~~~l~~~~p~-~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~--~~D~~~~~~vlh 255 (353)
T 4a6d_A 180 FPLMCDLGGGAGALAKECMSLYPG-CKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP--EADLYILARVLH 255 (353)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCSS-CEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCC--CCSEEEEESSGG
T ss_pred CCeEEeeCCCCCHHHHHHHHhCCC-ceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCCC--CceEEEeeeecc
Confidence 378999999999999999998654 67788887 7888888765 12466777776655544 479999999999
Q ss_pred cccccH-HHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhh---h----------HHHHHHHHHHHHhCeEEEe
Q 012571 292 IWDKKE-GIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKN---K----------SLLKVMEEFTEKICWSLIA 352 (460)
Q Consensus 292 ~~~~d~-~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~---~----------~~w~~i~~l~~~~~w~~~~ 352 (460)
+|.++. ..+|+++++.|+|||++++.+.........+.... . .+.++++.+.++.+|+.+.
T Consensus 256 ~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v~ 330 (353)
T 4a6d_A 256 DWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQ 330 (353)
T ss_dssp GSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEEE
T ss_pred cCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceEE
Confidence 995432 46899999999999999999986543322111000 0 1124456777788887654
No 186
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.10 E-value=4.9e-10 Score=112.92 Aligned_cols=101 Identities=14% Similarity=0.008 Sum_probs=77.1
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCC---eEEEeecccCCCC----CCCCccEEEE
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP---AMIGNFISRQLPY----PSLSFDMVHC 286 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~---~~~~~~d~~~Lp~----~~~sFDlVvs 286 (460)
.+|||+|||+|.++..+++.+ ..|+++|+|+.+++.|+++ ++. +.+...|..++.. .+++||+|++
T Consensus 155 ~~VLDlgcGtG~~sl~la~~g---a~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~ 231 (332)
T 2igt_A 155 LKVLNLFGYTGVASLVAAAAG---AEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILT 231 (332)
T ss_dssp CEEEEETCTTCHHHHHHHHTT---CEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEE
T ss_pred CcEEEcccccCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEE
Confidence 689999999999999999876 3899999999999998765 443 6777776655321 1568999999
Q ss_pred ccc---------cccccccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 287 AQC---------GIIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 287 ~~~---------l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
.-. +.++..+...++.++.++|||||++++.....
T Consensus 232 dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 232 DPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYS 275 (332)
T ss_dssp CCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECC
T ss_pred CCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCC
Confidence 421 11223455678999999999999988876543
No 187
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.10 E-value=2.9e-10 Score=114.99 Aligned_cols=115 Identities=22% Similarity=0.086 Sum_probs=87.6
Q ss_pred HHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEeec
Q 012571 196 YSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFI 270 (460)
Q Consensus 196 ~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl-~~~~~~~d 270 (460)
....+........+ .+|||+|||+|.++..++..+.....++|+|+++.+++.|+++ ++ .+.+...|
T Consensus 191 la~~l~~~~~~~~~--------~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D 262 (354)
T 3tma_A 191 LAQALLRLADARPG--------MRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRAD 262 (354)
T ss_dssp HHHHHHHHTTCCTT--------CCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECC
T ss_pred HHHHHHHHhCCCCC--------CEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCC
Confidence 34444555544443 7899999999999999998752235799999999999998776 44 47788888
Q ss_pred ccCCCCCCCCccEEEEccccccc--------cccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 271 SRQLPYPSLSFDMVHCAQCGIIW--------DKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 271 ~~~Lp~~~~sFDlVvs~~~l~~~--------~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
..+++.+.+.||+|+++-. ++. ......+++++.++|||||.+++..+
T Consensus 263 ~~~~~~~~~~~D~Ii~npP-yg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 263 ARHLPRFFPEVDRILANPP-HGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp GGGGGGTCCCCSEEEECCC-SCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred hhhCccccCCCCEEEECCC-CcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 8888877788999999632 211 11125689999999999999999987
No 188
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.10 E-value=2.4e-10 Score=105.12 Aligned_cols=95 Identities=9% Similarity=0.037 Sum_probs=70.3
Q ss_pred CeEEEeCCCCchHHHHHHhccCc-eeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCC---------------------
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLM-AVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP--------------------- 275 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~-~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp--------------------- 275 (460)
.+|||+|||+|.++..++++... ...++|+|+|+.+ ....+.+...|....+
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~~ 97 (201)
T 2plw_A 24 KIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD------PIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVDYK 97 (201)
T ss_dssp EEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC------CCTTCEEEECCTTTTSSCCC-----------CHHHHH
T ss_pred CEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC------CCCCceEEEccccchhhhhhccccccccccchhhHHH
Confidence 68999999999999999987431 3689999999831 1123556666666665
Q ss_pred ----CCCCCccEEEEcccccccc----ccH-------HHHHHHHHHhcCCCcEEEEEeC
Q 012571 276 ----YPSLSFDMVHCAQCGIIWD----KKE-------GIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 276 ----~~~~sFDlVvs~~~l~~~~----~d~-------~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
+++++||+|++... .++. .+. ..+++++.++|||||.|++...
T Consensus 98 ~~~~~~~~~fD~v~~~~~-~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (201)
T 2plw_A 98 LKEILQDKKIDIILSDAA-VPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMY 155 (201)
T ss_dssp HHHHHTTCCEEEEEECCC-CCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHhhcCCCcccEEEeCCC-cCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEe
Confidence 56789999999764 3331 121 1378999999999999999765
No 189
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.09 E-value=1.1e-09 Score=107.01 Aligned_cols=120 Identities=18% Similarity=0.130 Sum_probs=87.9
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEeecccCCCCCCCCccEEEEcccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQLPYPSLSFDMVHCAQCGII 292 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl-~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~ 292 (460)
.+|||+|||+|.++..+++.+. ...++++|+++.+++.|+++ ++ ++.+..+|...++. .++||+|++....
T Consensus 121 ~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p~-- 196 (272)
T 3a27_A 121 EVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVIMGYVH-- 196 (272)
T ss_dssp CEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECCCS--
T ss_pred CEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEEECCcc--
Confidence 7999999999999999998742 35899999999999988764 43 46677777777644 6789999987532
Q ss_pred ccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEE
Q 012571 293 WDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSL 350 (460)
Q Consensus 293 ~~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~ 350 (460)
+...++.++.+.|||||.++++....... ......+.++.+.+..++++
T Consensus 197 ---~~~~~l~~~~~~LkpgG~l~~s~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 245 (272)
T 3a27_A 197 ---KTHKFLDKTFEFLKDRGVIHYHETVAEKI------MYERPIERLKFYAEKNGYKL 245 (272)
T ss_dssp ---SGGGGHHHHHHHEEEEEEEEEEEEEEGGG------TTTHHHHHHHHHHHHTTEEE
T ss_pred ---cHHHHHHHHHHHcCCCCEEEEEEcCcccc------ccccHHHHHHHHHHHhCCee
Confidence 44568999999999999999988743221 11122334455555555554
No 190
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.09 E-value=3.6e-10 Score=106.58 Aligned_cols=95 Identities=19% Similarity=0.209 Sum_probs=74.0
Q ss_pred CeEEEeCCCCchHHHHHHhccCc-----eeEEEEeeCCHHHHHHHHHc----C------CCeEEEeecccCCCCCC-CCc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLM-----AVCVAVYEATGSQVQLALER----G------LPAMIGNFISRQLPYPS-LSF 281 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~-----~~~v~giD~s~~~l~~A~~r----g------l~~~~~~~d~~~Lp~~~-~sF 281 (460)
.+|||||||+|.++..+++.... ..+++++|+++.+++.|+++ + ..+.+...|... ++++ ++|
T Consensus 86 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~f 164 (227)
T 1r18_A 86 ARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYPPNAPY 164 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCGGGCSE
T ss_pred CEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCCcCCCc
Confidence 79999999999999999885211 13899999999999988765 1 246666666655 4444 789
Q ss_pred cEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 282 DMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 282 DlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
|+|++...+.++ ++++.++|||||++++....
T Consensus 165 D~I~~~~~~~~~-------~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 165 NAIHVGAAAPDT-------PTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp EEEEECSCBSSC-------CHHHHHTEEEEEEEEEEESC
T ss_pred cEEEECCchHHH-------HHHHHHHhcCCCEEEEEEec
Confidence 999998765554 26889999999999998864
No 191
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.07 E-value=2.9e-10 Score=120.12 Aligned_cols=96 Identities=23% Similarity=0.248 Sum_probs=76.6
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccCCCCCCCCccEEEEccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~ 291 (460)
.+|||||||+|.++..+++.+. .+++++|+|+ +++.|+++ ++ .+.+...|..+++++ ++||+|++....+
T Consensus 160 ~~VLDiGcGtG~la~~la~~~~--~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~~~~ 235 (480)
T 3b3j_A 160 KIVLDVGCGSGILSFFAAQAGA--RKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGY 235 (480)
T ss_dssp CEEEEESCSTTHHHHHHHHTTC--SEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCHH
T ss_pred CEEEEecCcccHHHHHHHHcCC--CEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccC-CCeEEEEEeCchH
Confidence 7999999999999999988643 5899999998 88887654 44 477888888877765 5899999986555
Q ss_pred ccc-ccHHHHHHHHHHhcCCCcEEEEE
Q 012571 292 IWD-KKEGIFLIEADRLLKPGGYFVLT 317 (460)
Q Consensus 292 ~~~-~d~~~~L~ei~RvLkPGG~lvl~ 317 (460)
++. ++....+.++.++|||||++++.
T Consensus 236 ~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 236 MLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp HHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred hcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 653 33345778899999999999853
No 192
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.06 E-value=1.3e-10 Score=125.25 Aligned_cols=100 Identities=14% Similarity=0.018 Sum_probs=82.1
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----C-CCeEEEeecccCC--CCCCCCccEEEEcccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----G-LPAMIGNFISRQL--PYPSLSFDMVHCAQCG 290 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----g-l~~~~~~~d~~~L--p~~~~sFDlVvs~~~l 290 (460)
.+|||||||.|.++..|+++| .+|+|+|.++.+++.|+.. + +++.+...+++++ .+.+++||+|+|..++
T Consensus 68 ~~vLDvGCG~G~~~~~la~~g---a~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ 144 (569)
T 4azs_A 68 LNVLDLGCAQGFFSLSLASKG---ATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVF 144 (569)
T ss_dssp CEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCH
T ss_pred CeEEEECCCCcHHHHHHHhCC---CEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcch
Confidence 689999999999999999998 5899999999999988754 3 5678888888777 4678899999999988
Q ss_pred ccccccHH--HHHHHHHHhcCCCcEEEEEeCCC
Q 012571 291 IIWDKKEG--IFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 291 ~~~~~d~~--~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
+|+. ++. ..+..+.+.|+++|..++.....
T Consensus 145 ehv~-~~~~~~~~~~~~~tl~~~~~~~~~~~~~ 176 (569)
T 4azs_A 145 HHIV-HLHGIDEVKRLLSRLADVTQAVILELAV 176 (569)
T ss_dssp HHHH-HHHCHHHHHHHHHHHHHHSSEEEEECCC
T ss_pred hcCC-CHHHHHHHHHHHHHhccccceeeEEecc
Confidence 8884 443 34567888898988887776544
No 193
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.05 E-value=1.2e-10 Score=113.72 Aligned_cols=94 Identities=19% Similarity=0.083 Sum_probs=69.5
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCC-------CeEEE--eecccCCCCCCCCccEEEEcc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGL-------PAMIG--NFISRQLPYPSLSFDMVHCAQ 288 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl-------~~~~~--~~d~~~Lp~~~~sFDlVvs~~ 288 (460)
.+|||||||+|.++..++++ ..|+|+|+++ |+..++++.. .+.+. .+|...++ +++||+|+|..
T Consensus 76 ~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~sd~ 148 (265)
T 2oxt_A 76 GRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIMCDV 148 (265)
T ss_dssp EEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEEECC
T ss_pred CEEEEeCcCCCHHHHHHHHc----CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEEEeC
Confidence 79999999999999999987 3689999998 5433322221 35666 67777765 78999999975
Q ss_pred cccccccc----HH---HHHHHHHHhcCCCc--EEEEEeCC
Q 012571 289 CGIIWDKK----EG---IFLIEADRLLKPGG--YFVLTSPE 320 (460)
Q Consensus 289 ~l~~~~~d----~~---~~L~ei~RvLkPGG--~lvl~~~~ 320 (460)
+ ++..+ .. .+|.++.++||||| .|++....
T Consensus 149 ~--~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 149 G--ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp C--CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred c--ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 4 22211 11 37899999999999 99997754
No 194
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.05 E-value=8.9e-11 Score=115.41 Aligned_cols=94 Identities=19% Similarity=0.149 Sum_probs=70.3
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCC-------CeEEE--eecccCCCCCCCCccEEEEcc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGL-------PAMIG--NFISRQLPYPSLSFDMVHCAQ 288 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl-------~~~~~--~~d~~~Lp~~~~sFDlVvs~~ 288 (460)
.+|||+|||+|.++..++++ ..|+|+|+++ |+..++++.. ++.+. .+|...++ +++||+|+|..
T Consensus 84 ~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vvsd~ 156 (276)
T 2wa2_A 84 GTVVDLGCGRGSWSYYAASQ----PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVLCDI 156 (276)
T ss_dssp EEEEEESCTTCHHHHHHHTS----TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEEECC
T ss_pred CEEEEeccCCCHHHHHHHHc----CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEEECC
Confidence 78999999999999999987 3689999998 6443333222 45666 77777766 78999999976
Q ss_pred cccccccc-----HH--HHHHHHHHhcCCCc--EEEEEeCC
Q 012571 289 CGIIWDKK-----EG--IFLIEADRLLKPGG--YFVLTSPE 320 (460)
Q Consensus 289 ~l~~~~~d-----~~--~~L~ei~RvLkPGG--~lvl~~~~ 320 (460)
+ ++..+ .. .+|.++.++||||| .|++....
T Consensus 157 ~--~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 157 G--ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp C--CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred C--cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 4 22111 11 37899999999999 99987654
No 195
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.05 E-value=5.4e-09 Score=96.29 Aligned_cols=93 Identities=14% Similarity=0.020 Sum_probs=70.2
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEccccccccc-c
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDK-K 296 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~-d 296 (460)
.+|||+|||+|.++..+++.+. ..++|+|+++.+++.|+++...+.+...|...++ ++||+|+++..++++.. .
T Consensus 53 ~~vlD~gcG~G~~~~~l~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~~~~ 127 (200)
T 1ne2_A 53 RSVIDAGTGNGILACGSYLLGA--ESVTAFDIDPDAIETAKRNCGGVNFMVADVSEIS---GKYDTWIMNPPFGSVVKHS 127 (200)
T ss_dssp SEEEEETCTTCHHHHHHHHTTB--SEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCC---CCEEEEEECCCC-------
T ss_pred CEEEEEeCCccHHHHHHHHcCC--CEEEEEECCHHHHHHHHHhcCCCEEEECcHHHCC---CCeeEEEECCCchhccCch
Confidence 7899999999999999998742 4799999999999999887446677777777765 68999999876555532 2
Q ss_pred HHHHHHHHHHhcCCCcEEEEE
Q 012571 297 EGIFLIEADRLLKPGGYFVLT 317 (460)
Q Consensus 297 ~~~~L~ei~RvLkPGG~lvl~ 317 (460)
...+++++.+++ |+.+++.
T Consensus 128 ~~~~l~~~~~~~--g~~~~~~ 146 (200)
T 1ne2_A 128 DRAFIDKAFETS--MWIYSIG 146 (200)
T ss_dssp CHHHHHHHHHHE--EEEEEEE
T ss_pred hHHHHHHHHHhc--CcEEEEE
Confidence 246899999998 5544444
No 196
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.03 E-value=7.2e-10 Score=105.46 Aligned_cols=98 Identities=15% Similarity=0.162 Sum_probs=75.3
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccC-CC--------------C
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQ-LP--------------Y 276 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~-Lp--------------~ 276 (460)
.+|||||||+|.++..+++.......++++|+++.+++.|+++ +. .+.+..+|... ++ |
T Consensus 62 ~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~f 141 (239)
T 2hnk_A 62 KRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASDF 141 (239)
T ss_dssp SEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTTT
T ss_pred CEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccccc
Confidence 7899999999999999998743346899999999999998776 43 25555555432 11 3
Q ss_pred CC--CCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 277 PS--LSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 277 ~~--~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
++ ++||+|++... ..+...+++++.++|||||++++.+.
T Consensus 142 ~~~~~~fD~I~~~~~----~~~~~~~l~~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 142 AFGPSSIDLFFLDAD----KENYPNYYPLILKLLKPGGLLIADNV 182 (239)
T ss_dssp CCSTTCEEEEEECSC----GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred cCCCCCcCEEEEeCC----HHHHHHHHHHHHHHcCCCeEEEEEcc
Confidence 33 78999998743 23445789999999999999999764
No 197
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.02 E-value=6.6e-10 Score=113.77 Aligned_cols=95 Identities=24% Similarity=0.258 Sum_probs=73.3
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccCCCCCCCCccEEEEcccc-
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPYPSLSFDMVHCAQCG- 290 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~Lp~~~~sFDlVvs~~~l- 290 (460)
.+|||||||+|.++...++.|. ..|+++|.|+ |++.|++. ++ .+.+...+.+.+.++ +.||+|+|-...
T Consensus 85 k~VLDvG~GtGiLs~~Aa~aGA--~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~ 160 (376)
T 4hc4_A 85 KTVLDVGAGTGILSIFCAQAGA--RRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGY 160 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC--SEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBT
T ss_pred CEEEEeCCCccHHHHHHHHhCC--CEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeecccc
Confidence 6899999999999998888875 5799999996 67766543 44 477778888888776 679999984321
Q ss_pred -ccccccHHHHHHHHHHhcCCCcEEEE
Q 012571 291 -IIWDKKEGIFLIEADRLLKPGGYFVL 316 (460)
Q Consensus 291 -~~~~~d~~~~L~ei~RvLkPGG~lvl 316 (460)
.........++....|.|||||.++-
T Consensus 161 ~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 161 GLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp TBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred cccccchhhhHHHHHHhhCCCCceECC
Confidence 22224566788889999999999873
No 198
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.02 E-value=3e-09 Score=111.29 Aligned_cols=104 Identities=20% Similarity=0.167 Sum_probs=79.4
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEeecccCCC--CCCCCccEEEEc---
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQLP--YPSLSFDMVHCA--- 287 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl-~~~~~~~d~~~Lp--~~~~sFDlVvs~--- 287 (460)
.+|||+|||+|..+..+++.......++++|+++.+++.++++ |+ .+.+...|...++ +++++||+|++.
T Consensus 261 ~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D~Pc 340 (450)
T 2yxl_A 261 ETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLLDAPC 340 (450)
T ss_dssp CEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEEECCC
T ss_pred CEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEEcCCC
Confidence 7999999999999999998632235899999999999988765 55 5677777777765 555789999962
Q ss_pred --cccccccccH----------------HHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 288 --QCGIIWDKKE----------------GIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 288 --~~l~~~~~d~----------------~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
...++-.++. ..++.++.++|||||++++++...
T Consensus 341 sg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 341 TSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp CCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred CCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 2222211221 468999999999999999998754
No 199
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.02 E-value=9.2e-10 Score=109.10 Aligned_cols=101 Identities=20% Similarity=0.186 Sum_probs=74.0
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----------CCCeEEEeecccC-CCCCCCCccEEE
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----------GLPAMIGNFISRQ-LPYPSLSFDMVH 285 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----------gl~~~~~~~d~~~-Lp~~~~sFDlVv 285 (460)
+.+|||||||+|.++..+++.. ...+++++|+++.+++.|++. ..++.+..+|... +...+++||+|+
T Consensus 84 ~~~VLdiG~G~G~~~~~l~~~~-~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 84 AKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp CCEEEEESCTTCHHHHHHHTCT-TCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCEEEEEeCChhHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 4799999999999999999873 336899999999999999874 1245566666544 334568999999
Q ss_pred EccccccccccH----HHHHHHHHHhcCCCcEEEEEeC
Q 012571 286 CAQCGIIWDKKE----GIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 286 s~~~l~~~~~d~----~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
+.. ..++.+.. ..+++++.++|||||.+++...
T Consensus 163 ~D~-~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 163 SDC-TDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp ECC-----------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ECC-CCccCcchhccHHHHHHHHHHhcCCCCEEEEecC
Confidence 963 23332221 5699999999999999999764
No 200
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.02 E-value=9.7e-11 Score=112.57 Aligned_cols=100 Identities=12% Similarity=-0.025 Sum_probs=76.9
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccCC-CCC-----CCCccEEE
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQL-PYP-----SLSFDMVH 285 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~L-p~~-----~~sFDlVv 285 (460)
.+|||||||+|..+..+++.......++++|+++.+++.|+++ ++ .+.+..+|..+. +.. +++||+|+
T Consensus 62 ~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V~ 141 (242)
T 3r3h_A 62 KKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFIF 141 (242)
T ss_dssp SEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEEE
T ss_pred CEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEEE
Confidence 7899999999999999998643346899999999988776654 44 467777666443 211 47899999
Q ss_pred EccccccccccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 286 CAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 286 s~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
+... ..+...+++++.++|||||++++.+...
T Consensus 142 ~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~~~~ 173 (242)
T 3r3h_A 142 IDAD----KTNYLNYYELALKLVTPKGLIAIDNIFW 173 (242)
T ss_dssp EESC----GGGHHHHHHHHHHHEEEEEEEEEECSSS
T ss_pred EcCC----hHHhHHHHHHHHHhcCCCeEEEEECCcc
Confidence 8642 3455678999999999999999977643
No 201
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.02 E-value=4.8e-10 Score=113.32 Aligned_cols=98 Identities=16% Similarity=0.132 Sum_probs=79.1
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEcccccccccc
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKK 296 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~d 296 (460)
..+|||||||+|.++..++++.. ..+++++|+ +.+++.|++. ..+.+...|... +++ .||+|++..++++|. +
T Consensus 194 ~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~~~-d 266 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIHEIFP-HLKCTVFDQ-PQVVGNLTGN-ENLNFVGGDMFK-SIP--SADAVLLKWVLHDWN-D 266 (358)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCT-TSEEEEEEC-HHHHSSCCCC-SSEEEEECCTTT-CCC--CCSEEEEESCGGGSC-H
T ss_pred CCEEEEECCCcCHHHHHHHHHCC-CCeEEEecc-HHHHhhcccC-CCcEEEeCccCC-CCC--CceEEEEcccccCCC-H
Confidence 37899999999999999998853 357899999 7888877542 236666666665 665 499999999888884 5
Q ss_pred HH--HHHHHHHHhcCC---CcEEEEEeCCC
Q 012571 297 EG--IFLIEADRLLKP---GGYFVLTSPES 321 (460)
Q Consensus 297 ~~--~~L~ei~RvLkP---GG~lvl~~~~~ 321 (460)
.. .+|++++++||| ||++++.+...
T Consensus 267 ~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 296 (358)
T 1zg3_A 267 EQSLKILKNSKEAISHKGKDGKVIIIDISI 296 (358)
T ss_dssp HHHHHHHHHHHHHTGGGGGGCEEEEEECEE
T ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEEEecc
Confidence 44 799999999999 99999998754
No 202
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.01 E-value=1e-09 Score=104.32 Aligned_cols=99 Identities=15% Similarity=0.124 Sum_probs=76.2
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeeccc----CCCCCC--CCccEEE
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISR----QLPYPS--LSFDMVH 285 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~----~Lp~~~--~sFDlVv 285 (460)
.+|||||||+|..+..+++.......++++|+++.+++.|+++ ++ .+.+...+.. .++..+ ++||+|+
T Consensus 74 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V~ 153 (232)
T 3cbg_A 74 KQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLIF 153 (232)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEEE
T ss_pred CEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEEE
Confidence 6899999999999999998743246899999999999998765 44 3566655542 233333 7899999
Q ss_pred EccccccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 286 CAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 286 s~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
+... ..+...+++++.++|||||++++.+..
T Consensus 154 ~d~~----~~~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 154 IDAD----KRNYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp ECSC----GGGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred ECCC----HHHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 8642 245567999999999999999997654
No 203
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.01 E-value=5.8e-10 Score=107.44 Aligned_cols=98 Identities=11% Similarity=0.029 Sum_probs=75.8
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccCC-CC------CCCCccEE
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQL-PY------PSLSFDMV 284 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~L-p~------~~~sFDlV 284 (460)
.+|||||||+|..+..+++.......++++|+++.+++.|+++ ++ .+.+..+|.... +. ++++||+|
T Consensus 81 ~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~V 160 (247)
T 1sui_A 81 KNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDFI 160 (247)
T ss_dssp CEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSEE
T ss_pred CEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEEE
Confidence 7899999999999999998733246899999999999998765 44 356666655432 21 15789999
Q ss_pred EEccccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 285 HCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 285 vs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
++... ..+...+++++.++|||||++++.+.
T Consensus 161 ~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~~ 191 (247)
T 1sui_A 161 FVDAD----KDNYLNYHKRLIDLVKVGGVIGYDNT 191 (247)
T ss_dssp EECSC----STTHHHHHHHHHHHBCTTCCEEEECT
T ss_pred EEcCc----hHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 98642 24556799999999999999998764
No 204
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.00 E-value=1.7e-09 Score=109.05 Aligned_cols=101 Identities=18% Similarity=0.107 Sum_probs=76.8
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcC---------CCeEEEeecccCC--CCCCCCccEEE
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---------LPAMIGNFISRQL--PYPSLSFDMVH 285 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rg---------l~~~~~~~d~~~L--p~~~~sFDlVv 285 (460)
..+|||||||+|.++..+++.. ...+++++|+++.+++.|+++- .++.+...|.... .+++++||+|+
T Consensus 121 ~~~VLdIG~G~G~~a~~la~~~-~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi 199 (334)
T 1xj5_A 121 PKKVLVIGGGDGGVLREVARHA-SIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVI 199 (334)
T ss_dssp CCEEEEETCSSSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEE
T ss_pred CCEEEEECCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEE
Confidence 4799999999999999999873 2368999999999999998652 2566776665443 23467899999
Q ss_pred Ecccccccc--cc--HHHHHHHHHHhcCCCcEEEEEeC
Q 012571 286 CAQCGIIWD--KK--EGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 286 s~~~l~~~~--~d--~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
+.. ..++. .+ ...+++++.++|||||.+++...
T Consensus 200 ~d~-~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 236 (334)
T 1xj5_A 200 VDS-SDPIGPAKELFEKPFFQSVARALRPGGVVCTQAE 236 (334)
T ss_dssp ECC-CCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECC
T ss_pred ECC-CCccCcchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 964 22221 21 35799999999999999999743
No 205
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.99 E-value=1.5e-09 Score=108.66 Aligned_cols=100 Identities=17% Similarity=0.095 Sum_probs=76.2
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcC-----CCeEEEeecccCC--CCCCCCccEEEEcccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG-----LPAMIGNFISRQL--PYPSLSFDMVHCAQCG 290 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rg-----l~~~~~~~d~~~L--p~~~~sFDlVvs~~~l 290 (460)
.+|||||||+|.++..+++.... .+++++|+++.+++.|++.- .++.+...|.... .+++++||+|++.. .
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~-~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~-~ 168 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQ-SRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDV-F 168 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTT-CEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECC-S
T ss_pred CEEEEEECCcCHHHHHHHHHCCC-cEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECC-C
Confidence 49999999999999999985322 58999999999999998862 2466666665443 24568999999863 2
Q ss_pred cccc--cc--HHHHHHHHHHhcCCCcEEEEEeC
Q 012571 291 IIWD--KK--EGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 291 ~~~~--~d--~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
.+.. .. ...++++++++|||||.+++...
T Consensus 169 ~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 169 AGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp TTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 2221 11 25699999999999999998775
No 206
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.99 E-value=1.8e-09 Score=105.50 Aligned_cols=105 Identities=18% Similarity=0.154 Sum_probs=78.9
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEeecccCCCC----CCCCccEEEEcc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQLPY----PSLSFDMVHCAQ 288 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl-~~~~~~~d~~~Lp~----~~~sFDlVvs~~ 288 (460)
.+|||+|||+|..+..+++.......++++|+++.+++.++++ ++ .+.+...|...++. .+++||+|++.-
T Consensus 85 ~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl~d~ 164 (274)
T 3ajd_A 85 DFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKILLDA 164 (274)
T ss_dssp CEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEEE
T ss_pred CEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEEEEcC
Confidence 7999999999999999998532236899999999999988765 44 56677777666543 267899999862
Q ss_pred ccc--c---------------ccccHHHHHHHHHHhcCCCcEEEEEeCCCC
Q 012571 289 CGI--I---------------WDKKEGIFLIEADRLLKPGGYFVLTSPESK 322 (460)
Q Consensus 289 ~l~--~---------------~~~d~~~~L~ei~RvLkPGG~lvl~~~~~~ 322 (460)
... . .......+++++.++|||||++++++....
T Consensus 165 Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~ 215 (274)
T 3ajd_A 165 PCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSME 215 (274)
T ss_dssp CCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred CCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCC
Confidence 110 0 113345789999999999999999887543
No 207
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.98 E-value=1e-09 Score=103.16 Aligned_cols=99 Identities=15% Similarity=0.087 Sum_probs=75.4
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccCC-C-CC----CCCccEEE
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQL-P-YP----SLSFDMVH 285 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~L-p-~~----~~sFDlVv 285 (460)
.+|||||||+|.++..+++.......++++|+++.+++.|+++ ++ .+.+...|..+. + +. .++||+|+
T Consensus 71 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v~ 150 (229)
T 2avd_A 71 KKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVAV 150 (229)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEEEE
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccEEE
Confidence 7899999999999999998633246899999999999998765 43 466666654332 1 11 16899999
Q ss_pred EccccccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 286 CAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 286 s~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
+... ..+...+++++.++|||||.+++.+..
T Consensus 151 ~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 151 VDAD----KENCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp ECSC----STTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred ECCC----HHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 8642 234557899999999999999997653
No 208
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.97 E-value=7.8e-09 Score=105.44 Aligned_cols=123 Identities=13% Similarity=0.066 Sum_probs=89.2
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEeecccC-CCC-CCCCccEEEEcccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQ-LPY-PSLSFDMVHCAQCG 290 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl-~~~~~~~d~~~-Lp~-~~~sFDlVvs~~~l 290 (460)
.+|||+| |+|.++..++..+. ..+++++|+++.+++.|+++ ++ ++.+..+|... +|. .+++||+|+++..
T Consensus 174 ~~VLDlG-G~G~~~~~la~~~~-~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p- 250 (373)
T 2qm3_A 174 KDIFVLG-DDDLTSIALMLSGL-PKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPP- 250 (373)
T ss_dssp CEEEEES-CTTCHHHHHHHHTC-CSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCC-
T ss_pred CEEEEEC-CCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCC-
Confidence 7999999 99999999988753 25899999999999998876 55 67788888877 664 4578999999853
Q ss_pred ccccccHHHHHHHHHHhcCCCcEE-EEEeCCCCCCCCCCchhhhHHHHHHHHHHH-HhCeEEEe
Q 012571 291 IIWDKKEGIFLIEADRLLKPGGYF-VLTSPESKPRGSSSSRKNKSLLKVMEEFTE-KICWSLIA 352 (460)
Q Consensus 291 ~~~~~d~~~~L~ei~RvLkPGG~l-vl~~~~~~~~~~~~~~e~~~~w~~i~~l~~-~~~w~~~~ 352 (460)
++.. ....+++++.++|||||.+ +++.... . .....|..+..+.+ +.++....
T Consensus 251 ~~~~-~~~~~l~~~~~~LkpgG~~~~~~~~~~--~------~~~~~~~~~~~~l~~~~g~~~~~ 305 (373)
T 2qm3_A 251 ETLE-AIRAFVGRGIATLKGPRCAGYFGITRR--E------SSLDKWREIQKLLLNEFNVVITD 305 (373)
T ss_dssp SSHH-HHHHHHHHHHHTBCSTTCEEEEEECTT--T------CCHHHHHHHHHHHHHTSCCEEEE
T ss_pred CchH-HHHHHHHHHHHHcccCCeEEEEEEecC--c------CCHHHHHHHHHHHHHhcCcchhh
Confidence 3322 2467999999999999954 5554321 0 11234555666666 77776643
No 209
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.97 E-value=7.6e-10 Score=101.21 Aligned_cols=97 Identities=19% Similarity=0.084 Sum_probs=68.0
Q ss_pred CeEEEeCCCCchHHHHHHhccCce--------eEEEEeeCCHHHHHHHHHcCCCeEEE-eecccCCC--------CCCCC
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMA--------VCVAVYEATGSQVQLALERGLPAMIG-NFISRQLP--------YPSLS 280 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~--------~~v~giD~s~~~l~~A~~rgl~~~~~-~~d~~~Lp--------~~~~s 280 (460)
.+|||+|||+|.++..++++.... ..++++|+++.+ .-..+.+. .+|....+ +++++
T Consensus 24 ~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (196)
T 2nyu_A 24 LRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF------PLEGATFLCPADVTDPRTSQRILEVLPGRR 97 (196)
T ss_dssp CEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC------CCTTCEEECSCCTTSHHHHHHHHHHSGGGC
T ss_pred CEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc------cCCCCeEEEeccCCCHHHHHHHHHhcCCCC
Confidence 799999999999999999873221 589999999832 01134455 55544332 34568
Q ss_pred ccEEEEccccc---cccccH-------HHHHHHHHHhcCCCcEEEEEeCC
Q 012571 281 FDMVHCAQCGI---IWDKKE-------GIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 281 FDlVvs~~~l~---~~~~d~-------~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
||+|+|..... ++..+. ..+++++.++|||||.+++....
T Consensus 98 fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 98 ADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp EEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 99999964222 222222 36899999999999999998763
No 210
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.97 E-value=2.1e-09 Score=112.97 Aligned_cols=104 Identities=26% Similarity=0.272 Sum_probs=77.9
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCCeEEEeecccCCC-CCCCCccEEEEc----c
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQLP-YPSLSFDMVHCA----Q 288 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~~~~~~~d~~~Lp-~~~~sFDlVvs~----~ 288 (460)
.+|||+|||+|..+..+++.......|+++|+++.+++.++++ |+.+.+...|...++ +.+++||+|++. .
T Consensus 103 ~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D~PcSg 182 (464)
T 3m6w_A 103 ERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVLLDAPCSG 182 (464)
T ss_dssp CEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEECCCCC
T ss_pred CEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCCEEEECCCcCC
Confidence 7999999999999999998733335899999999999988765 666667777766654 346789999952 1
Q ss_pred -cccccccc----------------HHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 289 -CGIIWDKK----------------EGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 289 -~l~~~~~d----------------~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
..+.-.++ ...+|.++.++|||||++++++...
T Consensus 183 ~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 183 EGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp GGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred ccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 11111111 1468999999999999999988644
No 211
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.97 E-value=1.3e-09 Score=107.33 Aligned_cols=107 Identities=20% Similarity=0.095 Sum_probs=79.6
Q ss_pred hHHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----C--CCeEEE
Q 012571 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----G--LPAMIG 267 (460)
Q Consensus 194 ~~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----g--l~~~~~ 267 (460)
....+.+.+.+....+ .+|||||||+|.++..+++.+ ..++++|+++.|++.++++ + ..+.+.
T Consensus 14 ~~i~~~i~~~~~~~~~--------~~VLDiG~G~G~lt~~L~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~ 82 (285)
T 1zq9_A 14 PLIINSIIDKAALRPT--------DVVLEVGPGTGNMTVKLLEKA---KKVVACELDPRLVAELHKRVQGTPVASKLQVL 82 (285)
T ss_dssp HHHHHHHHHHTCCCTT--------CEEEEECCTTSTTHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEE
T ss_pred HHHHHHHHHhcCCCCC--------CEEEEEcCcccHHHHHHHhhC---CEEEEEECCHHHHHHHHHHHHhcCCCCceEEE
Confidence 4567777777766554 789999999999999999986 4899999999999998876 2 246777
Q ss_pred eecccCCCCCCCCccEEEEccccccccccHH-HHH--------------HHH--HHhcCCCcEE
Q 012571 268 NFISRQLPYPSLSFDMVHCAQCGIIWDKKEG-IFL--------------IEA--DRLLKPGGYF 314 (460)
Q Consensus 268 ~~d~~~Lp~~~~sFDlVvs~~~l~~~~~d~~-~~L--------------~ei--~RvLkPGG~l 314 (460)
.+|...++++ +||+|+++. .+++..+.- .++ +|+ +++|||||.+
T Consensus 83 ~~D~~~~~~~--~fD~vv~nl-py~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~ 143 (285)
T 1zq9_A 83 VGDVLKTDLP--FFDTCVANL-PYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKL 143 (285)
T ss_dssp ESCTTTSCCC--CCSEEEEEC-CGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTT
T ss_pred Ecceecccch--hhcEEEEec-CcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCcc
Confidence 8888777765 799999974 455532221 222 333 3689999976
No 212
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.97 E-value=3.6e-08 Score=90.97 Aligned_cols=117 Identities=15% Similarity=0.092 Sum_probs=84.4
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCCeEEEeecccCCCCCCCCccEEEEccccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIW 293 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~ 293 (460)
.+|||+|||+|.++..+++.+. ..++|+|+++.+++.|+++ ++.+.+...|...++ ++||+|+++-.....
T Consensus 51 ~~vlD~g~G~G~~~~~l~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~ 125 (207)
T 1wy7_A 51 KVVADLGAGTGVLSYGALLLGA--KEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPPFGSQ 125 (207)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC---CCCSEEEECCCCSSS
T ss_pred CEEEEeeCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC---CCCCEEEEcCCCccc
Confidence 7899999999999999998853 4799999999999999876 346777777777764 489999998644433
Q ss_pred c-ccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEEEee
Q 012571 294 D-KKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQ 353 (460)
Q Consensus 294 ~-~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~~~~ 353 (460)
. .....+++++.++| ||.+++.... ....+.+....++.+|+....
T Consensus 126 ~~~~~~~~l~~~~~~l--~~~~~~~~~~------------~~~~~~~~~~l~~~g~~~~~~ 172 (207)
T 1wy7_A 126 RKHADRPFLLKAFEIS--DVVYSIHLAK------------PEVRRFIEKFSWEHGFVVTHR 172 (207)
T ss_dssp STTTTHHHHHHHHHHC--SEEEEEEECC------------HHHHHHHHHHHHHTTEEEEEE
T ss_pred cCCchHHHHHHHHHhc--CcEEEEEeCC------------cCCHHHHHHHHHHCCCeEEEE
Confidence 2 23346889999998 6655444221 123344556667788876443
No 213
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.96 E-value=2.2e-09 Score=105.60 Aligned_cols=114 Identities=16% Similarity=0.175 Sum_probs=80.6
Q ss_pred hHHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCC--eEEE
Q 012571 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP--AMIG 267 (460)
Q Consensus 194 ~~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~--~~~~ 267 (460)
....+.+.+.+....+ .+|||+|||+|.++..+++. ...+++++|+|+.+++.|+++ ++. +.+.
T Consensus 109 e~lv~~~l~~~~~~~~--------~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~ 178 (284)
T 1nv8_A 109 EELVELALELIRKYGI--------KTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVR 178 (284)
T ss_dssp HHHHHHHHHHHHHHTC--------CEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEE
T ss_pred HHHHHHHHHHhcccCC--------CEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEE
Confidence 3455555555542222 68999999999999999987 337899999999999998765 443 6777
Q ss_pred eecccCCCCCCCCc---cEEEEccccc-----------ccc-------ccHHHHHHHHH-HhcCCCcEEEEEeC
Q 012571 268 NFISRQLPYPSLSF---DMVHCAQCGI-----------IWD-------KKEGIFLIEAD-RLLKPGGYFVLTSP 319 (460)
Q Consensus 268 ~~d~~~Lp~~~~sF---DlVvs~~~l~-----------~~~-------~d~~~~L~ei~-RvLkPGG~lvl~~~ 319 (460)
..|.... + .++| |+|+++--.. |.+ .+...+++++. +.|+|||++++...
T Consensus 179 ~~D~~~~-~-~~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 179 KGEFLEP-F-KEKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp ESSTTGG-G-GGGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECC
T ss_pred ECcchhh-c-ccccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 7766542 2 2578 9999971111 110 11225899999 99999999998644
No 214
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.95 E-value=2.7e-09 Score=104.85 Aligned_cols=102 Identities=17% Similarity=0.121 Sum_probs=77.0
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcC---------CCeEEEeecccCC-CCCCCCccEEEE
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---------LPAMIGNFISRQL-PYPSLSFDMVHC 286 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rg---------l~~~~~~~d~~~L-p~~~~sFDlVvs 286 (460)
..+|||||||+|.++..+++.. ...+++++|+++.+++.|+++- .++.+...|.... +..+++||+|++
T Consensus 79 ~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (283)
T 2i7c_A 79 PKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 157 (283)
T ss_dssp CCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCeEEEEeCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEE
Confidence 3799999999999999999873 2368999999999999998762 2456666665432 223678999999
Q ss_pred ccccccccc--cH--HHHHHHHHHhcCCCcEEEEEeCC
Q 012571 287 AQCGIIWDK--KE--GIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 287 ~~~l~~~~~--d~--~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
.. ..++.+ .. ..+++++.++|||||.+++....
T Consensus 158 d~-~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 194 (283)
T 2i7c_A 158 DS-SDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 194 (283)
T ss_dssp EC-CCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred cC-CCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCC
Confidence 53 233321 21 57999999999999999998653
No 215
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.95 E-value=2.2e-09 Score=106.81 Aligned_cols=101 Identities=14% Similarity=0.059 Sum_probs=75.0
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc---------CCCeEEEeecccC-CCCCCCCccEEEE
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER---------GLPAMIGNFISRQ-LPYPSLSFDMVHC 286 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r---------gl~~~~~~~d~~~-Lp~~~~sFDlVvs 286 (460)
..+|||||||+|.++..+++.. ...+++++|+++.+++.|+++ ..++.+...|... ++..+++||+|++
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~ 174 (304)
T 2o07_A 96 PRKVLIIGGGDGGVLREVVKHP-SVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIIT 174 (304)
T ss_dssp CCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEE
Confidence 3799999999999999999874 236899999999999999865 2346666666543 3345688999998
Q ss_pred ccccccccc----cHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 287 AQCGIIWDK----KEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 287 ~~~l~~~~~----d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
.. ..++.+ ....+++++.++|||||.+++...
T Consensus 175 d~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 210 (304)
T 2o07_A 175 DS-SDPMGPAESLFKESYYQLMKTALKEDGVLCCQGE 210 (304)
T ss_dssp EC-C-----------CHHHHHHHHHEEEEEEEEEEEE
T ss_pred CC-CCCCCcchhhhHHHHHHHHHhccCCCeEEEEecC
Confidence 64 333321 123589999999999999999764
No 216
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.94 E-value=2e-09 Score=102.81 Aligned_cols=98 Identities=11% Similarity=-0.013 Sum_probs=75.3
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccCC-C-C-----CCCCccEE
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQL-P-Y-----PSLSFDMV 284 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~L-p-~-----~~~sFDlV 284 (460)
.+|||||||+|..+..+++.-....+++++|+++.+++.|+++ ++ .+.+..+|..+. + + ++++||+|
T Consensus 72 ~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~I 151 (237)
T 3c3y_A 72 KKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDFG 151 (237)
T ss_dssp CEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEEE
T ss_pred CEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCEE
Confidence 7899999999999999998733246899999999999998765 44 356665554432 2 1 25789999
Q ss_pred EEccccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 285 HCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 285 vs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
++.. ...+...+++++.++|||||++++.+.
T Consensus 152 ~~d~----~~~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 152 FVDA----DKPNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp EECS----CGGGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred EECC----chHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 9763 224556799999999999999998764
No 217
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.94 E-value=2.8e-09 Score=106.88 Aligned_cols=100 Identities=18% Similarity=0.141 Sum_probs=75.9
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcC---------CCeEEEeecccC-CCCCCCCccEEEEc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---------LPAMIGNFISRQ-LPYPSLSFDMVHCA 287 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rg---------l~~~~~~~d~~~-Lp~~~~sFDlVvs~ 287 (460)
.+|||||||+|.++..+++.. ...+++++|+++.+++.|+++- .++.+...|... ++..+++||+|++.
T Consensus 118 ~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~d 196 (321)
T 2pt6_A 118 KNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVD 196 (321)
T ss_dssp CEEEEEECTTCHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEE
T ss_pred CEEEEEcCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEEC
Confidence 799999999999999999863 2368999999999999998762 245666665543 22235789999986
Q ss_pred ccccccc--ccH--HHHHHHHHHhcCCCcEEEEEeC
Q 012571 288 QCGIIWD--KKE--GIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 288 ~~l~~~~--~d~--~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
. ..++. ... ..+++++.++|||||.+++...
T Consensus 197 ~-~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 231 (321)
T 2pt6_A 197 S-SDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 231 (321)
T ss_dssp C-CCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEEC
T ss_pred C-cCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 4 22331 111 5799999999999999999764
No 218
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.94 E-value=7.3e-09 Score=102.51 Aligned_cols=100 Identities=17% Similarity=0.050 Sum_probs=74.4
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcC---------CCeEEEeecccC-CCCCCCCccEEEEc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---------LPAMIGNFISRQ-LPYPSLSFDMVHCA 287 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rg---------l~~~~~~~d~~~-Lp~~~~sFDlVvs~ 287 (460)
.+|||||||+|.++..+++.. ...+++++|+++.+++.|+++- .++.+...|... ++..+++||+|++.
T Consensus 92 ~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d 170 (296)
T 1inl_A 92 KKVLIIGGGDGGTLREVLKHD-SVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIIID 170 (296)
T ss_dssp CEEEEEECTTCHHHHHHTTST-TCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEEE
T ss_pred CEEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEEc
Confidence 799999999999999999873 2368999999999999988652 346666666543 33346789999985
Q ss_pred cccccccc-----cHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 288 QCGIIWDK-----KEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 288 ~~l~~~~~-----d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
. ..++.. ....+++++.++|||||.+++...
T Consensus 171 ~-~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 206 (296)
T 1inl_A 171 S-TDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE 206 (296)
T ss_dssp C-----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred C-CCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEcc
Confidence 3 223111 125689999999999999999854
No 219
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.94 E-value=1.1e-08 Score=97.88 Aligned_cols=119 Identities=15% Similarity=0.099 Sum_probs=90.2
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccCCCCCCCCccEEEEccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~ 291 (460)
.+|||||||+|.++..+++.+. ...++++|+++.+++.|+++ ++ .+.+..+|......+++.||+|+.....-
T Consensus 23 ~~VlDIGtGsG~l~i~la~~~~-~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGmGg 101 (230)
T 3lec_A 23 ARLLDVGSDHAYLPIFLLQMGY-CDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGMGG 101 (230)
T ss_dssp EEEEEETCSTTHHHHHHHHTTC-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEECH
T ss_pred CEEEEECCchHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCCch
Confidence 6899999999999999999864 36899999999999999866 44 46777777666554445799988654211
Q ss_pred cccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEEEeee
Q 012571 292 IWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQQ 354 (460)
Q Consensus 292 ~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~~~~~ 354 (460)
+-...++.+..+.|+++|+|+++.... ...+..+..+.+|.+..+.
T Consensus 102 ---~lI~~IL~~~~~~l~~~~~lIlqp~~~--------------~~~lr~~L~~~Gf~i~~E~ 147 (230)
T 3lec_A 102 ---RLIADILNNDIDKLQHVKTLVLQPNNR--------------EDDLRKWLAANDFEIVAED 147 (230)
T ss_dssp ---HHHHHHHHHTGGGGTTCCEEEEEESSC--------------HHHHHHHHHHTTEEEEEEE
T ss_pred ---HHHHHHHHHHHHHhCcCCEEEEECCCC--------------hHHHHHHHHHCCCEEEEEE
Confidence 223457888899999999999987421 3456677788899987764
No 220
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.93 E-value=3e-09 Score=103.66 Aligned_cols=91 Identities=14% Similarity=0.080 Sum_probs=73.7
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcC---------CCeEEEeecccCCCCCCCCccEEEEc
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---------LPAMIGNFISRQLPYPSLSFDMVHCA 287 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rg---------l~~~~~~~d~~~Lp~~~~sFDlVvs~ 287 (460)
..+|||||||+|.++..+++. . .+++++|+++.+++.|++.- .++.+...|..... ++||+|++.
T Consensus 73 ~~~VL~iG~G~G~~~~~ll~~-~--~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d 146 (262)
T 2cmg_A 73 LKEVLIVDGFDLELAHQLFKY-D--THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCL 146 (262)
T ss_dssp CCEEEEESSCCHHHHHHHTTS-S--CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEES
T ss_pred CCEEEEEeCCcCHHHHHHHhC-C--CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEEC
Confidence 379999999999999999987 3 68999999999999987641 24666666666554 789999986
Q ss_pred cccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 288 QCGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 288 ~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
. .++..+++++.++|||||.+++...
T Consensus 147 ~------~dp~~~~~~~~~~L~pgG~lv~~~~ 172 (262)
T 2cmg_A 147 Q------EPDIHRIDGLKRMLKEDGVFISVAK 172 (262)
T ss_dssp S------CCCHHHHHHHHTTEEEEEEEEEEEE
T ss_pred C------CChHHHHHHHHHhcCCCcEEEEEcC
Confidence 2 3445589999999999999999753
No 221
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.93 E-value=2.2e-09 Score=107.12 Aligned_cols=101 Identities=19% Similarity=0.119 Sum_probs=77.4
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcC----------CCeEEEeecccC-CCCCCCCccEEE
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG----------LPAMIGNFISRQ-LPYPSLSFDMVH 285 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rg----------l~~~~~~~d~~~-Lp~~~~sFDlVv 285 (460)
..+|||||||+|.++..+++.. ...+++++|+++.+++.|+++- .++.+...|... ++..+++||+|+
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHP-TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTST-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCeEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 3799999999999999999873 2368999999999999997641 246666666554 333467899999
Q ss_pred Eccccccc---cc--c--HHHHHHHHHHhcCCCcEEEEEeC
Q 012571 286 CAQCGIIW---DK--K--EGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 286 s~~~l~~~---~~--d--~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
+.. ..++ .+ . ...+++++.++|||||.+++...
T Consensus 157 ~d~-~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 196 (314)
T 1uir_A 157 IDL-TDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTG 196 (314)
T ss_dssp EEC-CCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ECC-CCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEcc
Confidence 974 3444 11 1 25789999999999999999753
No 222
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.93 E-value=7.4e-09 Score=101.40 Aligned_cols=101 Identities=14% Similarity=0.086 Sum_probs=76.4
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcC---------CCeEEEeecccC-CCCCCCCccEEEE
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---------LPAMIGNFISRQ-LPYPSLSFDMVHC 286 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rg---------l~~~~~~~d~~~-Lp~~~~sFDlVvs 286 (460)
..+|||||||+|.++..+++.. ...+++++|+++.+++.|++.- .++.+...|... ++..+++||+|++
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 76 PEHVLVVGGGDGGVIREILKHP-SVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp CCEEEEESCTTCHHHHHHTTCT-TCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCEEEEECCchHHHHHHHHhCC-CCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 3799999999999999999872 2368999999999999998742 246666666543 3334678999999
Q ss_pred cccccccccc----HHHHHHHHHHhcCCCcEEEEEeC
Q 012571 287 AQCGIIWDKK----EGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 287 ~~~l~~~~~d----~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
.. ..++.+. ...+++++.++|||||.+++...
T Consensus 155 d~-~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~ 190 (275)
T 1iy9_A 155 DS-TEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTD 190 (275)
T ss_dssp SC-SSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred CC-CCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 64 3333211 24699999999999999999864
No 223
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.92 E-value=1e-08 Score=104.70 Aligned_cols=118 Identities=20% Similarity=0.069 Sum_probs=85.9
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccCCCCCCCCccEEEEccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~ 291 (460)
.+|||+|||+|.++..++..+. ...++|+|+++.|++.|+++ ++ .+.+...|..++++++++||+|+++-...
T Consensus 219 ~~vLD~gCGsG~~~i~~a~~~~-~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npPyg 297 (373)
T 3tm4_A 219 GSVLDPMCGSGTILIELALRRY-SGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLPYG 297 (373)
T ss_dssp CCEEETTCTTCHHHHHHHHTTC-CSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECCCC
T ss_pred CEEEEccCcCcHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECCCCC
Confidence 7899999999999999998863 13799999999999999876 55 57888888899988889999999963211
Q ss_pred cc------ccc-HHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEEEee
Q 012571 292 IW------DKK-EGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQ 353 (460)
Q Consensus 292 ~~------~~d-~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~~~~ 353 (460)
.. ..+ ...+++++.++| ||.+++..+. ...++...++.+|+....
T Consensus 298 ~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~---------------~~~~~~~~~~~G~~~~~~ 349 (373)
T 3tm4_A 298 LKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTE---------------KKAIEEAIAENGFEIIHH 349 (373)
T ss_dssp ------CCHHHHHHHHHHHHHHHE--EEEEEEEESC---------------HHHHHHHHHHTTEEEEEE
T ss_pred cccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECC---------------HHHHHHHHHHcCCEEEEE
Confidence 11 011 145788999999 5555555541 123445667788887543
No 224
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.92 E-value=2e-09 Score=107.70 Aligned_cols=101 Identities=15% Similarity=0.026 Sum_probs=73.8
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcC---------CCeEEEeecccC-CCCCCCCccEEEE
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---------LPAMIGNFISRQ-LPYPSLSFDMVHC 286 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rg---------l~~~~~~~d~~~-Lp~~~~sFDlVvs 286 (460)
..+|||||||+|..+..+++.. ...+++++|+++.+++.|+++- .++.+...|... ++..+++||+|++
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHE-SVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCT-TCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 3799999999999999999873 3468999999999999998762 245666666543 2334678999998
Q ss_pred ccccccccccH----HHHHHHHHHhcCCCcEEEEEeC
Q 012571 287 AQCGIIWDKKE----GIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 287 ~~~l~~~~~d~----~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
.. ..++.+.. ..+++++.++|||||.+++...
T Consensus 188 d~-~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~ 223 (314)
T 2b2c_A 188 DS-SDPVGPAESLFGQSYYELLRDALKEDGILSSQGE 223 (314)
T ss_dssp CC-C-------------HHHHHHHHEEEEEEEEEECC
T ss_pred cC-CCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECC
Confidence 64 33332221 4689999999999999999863
No 225
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.90 E-value=5.2e-09 Score=107.36 Aligned_cols=123 Identities=12% Similarity=0.102 Sum_probs=86.7
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC---CeEEEeecccC-CCC---CCCCccEEEE
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL---PAMIGNFISRQ-LPY---PSLSFDMVHC 286 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl---~~~~~~~d~~~-Lp~---~~~sFDlVvs 286 (460)
.+|||+|||+|.++..+++.+. ..|+++|+|+.+++.|+++ ++ .+.+..+|..+ ++. ..++||+|++
T Consensus 214 ~~VLDl~cGtG~~sl~la~~ga--~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~ 291 (385)
T 2b78_A 214 KTVLNLFSYTAAFSVAAAMGGA--MATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIII 291 (385)
T ss_dssp CEEEEETCTTTHHHHHHHHTTB--SEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CeEEEEeeccCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEE
Confidence 7899999999999999998753 4899999999999998765 44 46777776644 221 2458999998
Q ss_pred cccc--------ccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeE
Q 012571 287 AQCG--------IIWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWS 349 (460)
Q Consensus 287 ~~~l--------~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~ 349 (460)
.-.. .....+...++.++.++|+|||.++++...... .....++.+...+.+.+.+
T Consensus 292 DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~-------~~~~~~~~i~~~~~~~g~~ 355 (385)
T 2b78_A 292 DPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANM-------TVSQFKKQIEKGFGKQKHT 355 (385)
T ss_dssp CCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS-------CHHHHHHHHHHHHTTCCCE
T ss_pred CCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcC-------CHHHHHHHHHHHHHHcCCc
Confidence 4221 111233345778889999999999998864422 1123345556666666666
No 226
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.90 E-value=1.4e-09 Score=104.21 Aligned_cols=101 Identities=12% Similarity=0.130 Sum_probs=68.4
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCC--eEEEeecccCC---CCC---CCCccEE
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP--AMIGNFISRQL---PYP---SLSFDMV 284 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~--~~~~~~d~~~L---p~~---~~sFDlV 284 (460)
..+|||+|||+|.++..++.+. ...+++|+|+++.|++.|+++ ++. +.+..+|..+. +++ +++||+|
T Consensus 66 ~~~vLDlG~G~G~~~~~la~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 66 LRRGIDIGTGASCIYPLLGATL-NGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCEEEEESCTTTTHHHHHHHHH-HCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCEEEEeCCChhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 3689999999999999988763 226899999999999998765 443 67777776542 344 2689999
Q ss_pred EEcccccccc--------------ccHHHHHHHHHHhcCCCcEEEEEe
Q 012571 285 HCAQCGIIWD--------------KKEGIFLIEADRLLKPGGYFVLTS 318 (460)
Q Consensus 285 vs~~~l~~~~--------------~d~~~~L~ei~RvLkPGG~lvl~~ 318 (460)
+++-..++.. .....++.+++|+|||||.+.+..
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~ 192 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVK 192 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHHHTHHHHHH
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEH
Confidence 9984333221 011235678888888888776653
No 227
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.89 E-value=4e-09 Score=103.55 Aligned_cols=98 Identities=14% Similarity=0.051 Sum_probs=73.5
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcC---------------CCeEEEeecccC-CCCCCCCc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---------------LPAMIGNFISRQ-LPYPSLSF 281 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rg---------------l~~~~~~~d~~~-Lp~~~~sF 281 (460)
.+|||||||+|.++..+++.+ ..+++++|+++.+++.|++.- .++.+...|... ++. +++|
T Consensus 77 ~~VLdiG~G~G~~~~~l~~~~--~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~f 153 (281)
T 1mjf_A 77 KRVLVIGGGDGGTVREVLQHD--VDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGF 153 (281)
T ss_dssp CEEEEEECTTSHHHHHHTTSC--CSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCCE
T ss_pred CeEEEEcCCcCHHHHHHHhCC--CCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCCe
Confidence 789999999999999999873 368999999999999998652 235555555433 222 5789
Q ss_pred cEEEEccccccccc--c--HHHHHHHHHHhcCCCcEEEEEeC
Q 012571 282 DMVHCAQCGIIWDK--K--EGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 282 DlVvs~~~l~~~~~--d--~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
|+|++.. ..++.. . ...+++++.++|||||.+++...
T Consensus 154 D~Ii~d~-~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 154 DVIIADS-TDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp EEEEEEC-CCCC-----TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEECC-CCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 9999864 333321 1 25689999999999999999753
No 228
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.89 E-value=1.8e-08 Score=97.15 Aligned_cols=119 Identities=16% Similarity=0.125 Sum_probs=88.8
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccCCCCCCCCccEEEEccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~ 291 (460)
.+|||||||+|.++..+++.+. ...++++|+++.+++.|+++ ++ .+.+...|......++..||+|++....-
T Consensus 23 ~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~IviagmGg 101 (244)
T 3gnl_A 23 ERIADIGSDHAYLPCFAVKNQT-ASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGMGG 101 (244)
T ss_dssp EEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEECH
T ss_pred CEEEEECCccHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCCch
Confidence 6899999999999999999863 36899999999999999876 54 36676666655544344699998754211
Q ss_pred cccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEEEeee
Q 012571 292 IWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQQ 354 (460)
Q Consensus 292 ~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~~~~~ 354 (460)
+-...++.+..+.|+++|+|+++.... ...+..+..+.+|.++...
T Consensus 102 ---~lI~~IL~~~~~~L~~~~~lIlq~~~~--------------~~~lr~~L~~~Gf~i~~E~ 147 (244)
T 3gnl_A 102 ---TLIRTILEEGAAKLAGVTKLILQPNIA--------------AWQLREWSEQNNWLITSEA 147 (244)
T ss_dssp ---HHHHHHHHHTGGGGTTCCEEEEEESSC--------------HHHHHHHHHHHTEEEEEEE
T ss_pred ---HHHHHHHHHHHHHhCCCCEEEEEcCCC--------------hHHHHHHHHHCCCEEEEEE
Confidence 223458889999999999999987421 3456667788899986553
No 229
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.89 E-value=5e-09 Score=108.90 Aligned_cols=115 Identities=15% Similarity=0.124 Sum_probs=85.4
Q ss_pred HHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCCeEEEeecccC
Q 012571 198 RQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQ 273 (460)
Q Consensus 198 ~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~~~~~~~d~~~ 273 (460)
..+...+...++ .+|||+|||+|..+..+++.... ..++++|+++.+++.++++ ++.+.+...|...
T Consensus 236 ~~~~~~l~~~~g--------~~VLDlgaG~G~~t~~la~~~~~-~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~ 306 (429)
T 1sqg_A 236 QGCMTWLAPQNG--------EHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRY 306 (429)
T ss_dssp HTHHHHHCCCTT--------CEEEEESCTTCHHHHHHHHHCTT-CEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTC
T ss_pred HHHHHHcCCCCc--------CeEEEECCCchHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhh
Confidence 344555555544 79999999999999999987533 6899999999999888765 6677777777776
Q ss_pred CC--CCCCCccEEEEc-----cccccccccH----------------HHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 274 LP--YPSLSFDMVHCA-----QCGIIWDKKE----------------GIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 274 Lp--~~~~sFDlVvs~-----~~l~~~~~d~----------------~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
++ +++++||+|++. ...++-.++. ..++.++.++|||||++++++...
T Consensus 307 ~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 307 PSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp THHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred chhhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 65 556789999962 1111111221 367999999999999999998644
No 230
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.88 E-value=1.1e-09 Score=108.98 Aligned_cols=97 Identities=18% Similarity=0.136 Sum_probs=66.7
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeC----CHHHHHHHHHc--C-CCeEEEee-cccCCCCCCCCccEEEEccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEA----TGSQVQLALER--G-LPAMIGNF-ISRQLPYPSLSFDMVHCAQC 289 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~----s~~~l~~A~~r--g-l~~~~~~~-d~~~Lp~~~~sFDlVvs~~~ 289 (460)
.+|||||||+|.++..+++++ .|+|+|+ ++.+++.+... + ..+.+... |...++ .++||+|+|...
T Consensus 84 ~~VLDlGcG~G~~s~~la~~~----~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~--~~~fD~V~sd~~ 157 (305)
T 2p41_A 84 GKVVDLGCGRGGWSYYCGGLK----NVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIP--PERCDTLLCDIG 157 (305)
T ss_dssp EEEEEETCTTSHHHHHHHTST----TEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSC--CCCCSEEEECCC
T ss_pred CEEEEEcCCCCHHHHHHHhcC----CEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCC--cCCCCEEEECCc
Confidence 799999999999999999872 5788998 45443222111 1 13556555 666554 578999999754
Q ss_pred cc--cccccHH---HHHHHHHHhcCCCcEEEEEeCC
Q 012571 290 GI--IWDKKEG---IFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 290 l~--~~~~d~~---~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
.. ++..+.. .+|.++.++|||||.|++....
T Consensus 158 ~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~ 193 (305)
T 2p41_A 158 ESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLN 193 (305)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESC
T ss_pred cccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 32 2222222 4789999999999999987653
No 231
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.87 E-value=4.2e-09 Score=97.56 Aligned_cols=93 Identities=16% Similarity=0.077 Sum_probs=66.7
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCC--------C---CCCccEEEE
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPY--------P---SLSFDMVHC 286 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~--------~---~~sFDlVvs 286 (460)
.+|||+|||+|.++..+++++ ..|+|+|+++.. ....+.+..+|..+.+. . .++||+|+|
T Consensus 27 ~~VLDlG~G~G~~s~~la~~~---~~V~gvD~~~~~------~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vls 97 (191)
T 3dou_A 27 DAVIEIGSSPGGWTQVLNSLA---RKIISIDLQEME------EIAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVS 97 (191)
T ss_dssp CEEEEESCTTCHHHHHHTTTC---SEEEEEESSCCC------CCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEE
T ss_pred CEEEEEeecCCHHHHHHHHcC---CcEEEEeccccc------cCCCeEEEEccccCHHHHHHHHHHhhcccCCcceEEec
Confidence 799999999999999999883 689999999742 11245666666665541 1 148999999
Q ss_pred ccccc---ccccc-------HHHHHHHHHHhcCCCcEEEEEeC
Q 012571 287 AQCGI---IWDKK-------EGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 287 ~~~l~---~~~~d-------~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
..... .+..+ ...++.++.++|||||.|++...
T Consensus 98 d~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 98 DAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp CCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 63111 11111 23578899999999999998776
No 232
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.85 E-value=1.6e-08 Score=104.23 Aligned_cols=101 Identities=19% Similarity=0.091 Sum_probs=74.8
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCCeEEEeecccCC-CCCCCCccEEEEcccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQL-PYPSLSFDMVHCAQCGII 292 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~~~~~~~d~~~L-p~~~~sFDlVvs~~~l~~ 292 (460)
.+|||+|||+|.++..++..+. .|+++|+|+.+++.|+++ ++...+..+|..++ +...+.||+|++.-..+.
T Consensus 216 ~~VLDlg~GtG~~sl~~a~~ga---~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~ 292 (393)
T 4dmg_A 216 ERVLDVYSYVGGFALRAARKGA---YALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTLV 292 (393)
T ss_dssp CEEEEESCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCCC
T ss_pred CeEEEcccchhHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcCC
Confidence 7899999999999999999863 499999999999998765 66555556665443 221344999998632211
Q ss_pred c--------cccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 293 W--------DKKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 293 ~--------~~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
- ..+...++.++.++|||||++++.+...
T Consensus 293 ~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 293 KRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp SSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 1 1233468899999999999999877643
No 233
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.85 E-value=3e-08 Score=94.51 Aligned_cols=118 Identities=14% Similarity=0.071 Sum_probs=87.1
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecc-cCCCCCCCCccEEEEcccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFIS-RQLPYPSLSFDMVHCAQCG 290 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~-~~Lp~~~~sFDlVvs~~~l 290 (460)
.+|||||||+|.++..++..+. ...++++|+++.+++.|+++ ++ .+.+...|. ..++. ...||+|+....
T Consensus 17 ~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~-~~~~D~IviaG~- 93 (225)
T 3kr9_A 17 AILLDVGSDHAYLPIELVERGQ-IKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE-TDQVSVITIAGM- 93 (225)
T ss_dssp EEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG-GGCCCEEEEEEE-
T ss_pred CEEEEeCCCcHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc-CcCCCEEEEcCC-
Confidence 6899999999999999999863 36899999999999998765 54 356666655 33432 226999987642
Q ss_pred ccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEEEeee
Q 012571 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQQ 354 (460)
Q Consensus 291 ~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~~~~~ 354 (460)
.- .-...++.+..+.|+|||+|+++... ....+..+..+.+|.++.+.
T Consensus 94 -Gg-~~i~~Il~~~~~~L~~~~~lVlq~~~--------------~~~~vr~~L~~~Gf~i~~e~ 141 (225)
T 3kr9_A 94 -GG-RLIARILEEGLGKLANVERLILQPNN--------------REDDLRIWLQDHGFQIVAES 141 (225)
T ss_dssp -CH-HHHHHHHHHTGGGCTTCCEEEEEESS--------------CHHHHHHHHHHTTEEEEEEE
T ss_pred -Ch-HHHHHHHHHHHHHhCCCCEEEEECCC--------------CHHHHHHHHHHCCCEEEEEE
Confidence 11 12346889999999999999986651 12456667788899987764
No 234
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.85 E-value=2.2e-08 Score=102.86 Aligned_cols=102 Identities=17% Similarity=0.050 Sum_probs=78.4
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC---CeEEEeecccCCCC----CCCCccEEEE
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL---PAMIGNFISRQLPY----PSLSFDMVHC 286 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl---~~~~~~~d~~~Lp~----~~~sFDlVvs 286 (460)
.+|||+|||+|.++..+++.+. ..++++|+++.+++.|+++ ++ ++.+..+|..++.. .+++||+|++
T Consensus 222 ~~VLDl~cG~G~~sl~la~~g~--~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~ 299 (396)
T 3c0k_A 222 KRVLNCFSYTGGFAVSALMGGC--SQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVM 299 (396)
T ss_dssp CEEEEESCTTCSHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CeEEEeeccCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEE
Confidence 7899999999999999999863 5899999999999988765 55 56777777655421 1468999998
Q ss_pred cccc--------ccccccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 287 AQCG--------IIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 287 ~~~l--------~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
.-.. .........++.++.++|+|||+++++....
T Consensus 300 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 300 DPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp CCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 6311 1112345578999999999999999988643
No 235
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.85 E-value=1.2e-08 Score=106.98 Aligned_cols=136 Identities=17% Similarity=0.172 Sum_probs=91.7
Q ss_pred HHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCC-eEEEeecccCC
Q 012571 200 IAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP-AMIGNFISRQL 274 (460)
Q Consensus 200 i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~-~~~~~~d~~~L 274 (460)
+...+....+ .+|||+|||+|..+..+++.......|+++|+++.+++.++++ |+. +.+...|...+
T Consensus 97 ~~~~L~~~~g--------~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l 168 (456)
T 3m4x_A 97 VGTAAAAKPG--------EKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAEL 168 (456)
T ss_dssp HHHHHCCCTT--------CEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHH
T ss_pred HHHHcCCCCC--------CEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHh
Confidence 3445555544 7999999999999999988632335899999999999888765 553 55666666555
Q ss_pred C-CCCCCccEEEEccc---ccccccc------------------HHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhh
Q 012571 275 P-YPSLSFDMVHCAQC---GIIWDKK------------------EGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKN 332 (460)
Q Consensus 275 p-~~~~sFDlVvs~~~---l~~~~~d------------------~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~ 332 (460)
+ ..+++||.|++.-- .-.+..+ ...+|.++.++|||||++++++-..... |.
T Consensus 169 ~~~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~e------En 242 (456)
T 3m4x_A 169 VPHFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPE------EN 242 (456)
T ss_dssp HHHHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGG------GT
T ss_pred hhhccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccc------cC
Confidence 4 23578999997311 0111111 1257999999999999999988744321 21
Q ss_pred hHHHHHHHHHHHHhCeEEEe
Q 012571 333 KSLLKVMEEFTEKICWSLIA 352 (460)
Q Consensus 333 ~~~w~~i~~l~~~~~w~~~~ 352 (460)
-+.+..+.++..|+++-
T Consensus 243 ---e~vv~~~l~~~~~~l~~ 259 (456)
T 3m4x_A 243 ---EEIISWLVENYPVTIEE 259 (456)
T ss_dssp ---HHHHHHHHHHSSEEEEC
T ss_pred ---HHHHHHHHHhCCCEEEe
Confidence 23455666777776654
No 236
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.84 E-value=2.4e-08 Score=98.18 Aligned_cols=122 Identities=13% Similarity=0.140 Sum_probs=88.5
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccCCCCCCCCccEEEEccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~ 291 (460)
.+|||+|||+|.++..++..+. ..|+++|+++.+++.++++ ++ .+.+..+|...++ ..+.||.|++...
T Consensus 127 ~~VlD~~aG~G~~~i~~a~~g~--~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~-~~~~~D~Vi~~~p-- 201 (278)
T 3k6r_A 127 ELVVDMFAGIGHLSLPIAVYGK--AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP-GENIADRILMGYV-- 201 (278)
T ss_dssp CEEEETTCTTTTTTHHHHHHTC--CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC-CCSCEEEEEECCC--
T ss_pred CEEEEecCcCcHHHHHHHHhcC--CeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc-cccCCCEEEECCC--
Confidence 7899999999999999998864 5799999999999988765 44 3667777877765 3678999998641
Q ss_pred cccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEEEee
Q 012571 292 IWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQ 353 (460)
Q Consensus 292 ~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~~~~ 353 (460)
.....++..+.++|||||++.+.+...... ......+.++.+++..+++....
T Consensus 202 ---~~~~~~l~~a~~~lk~gG~ih~~~~~~e~~------~~~~~~e~i~~~~~~~g~~v~~~ 254 (278)
T 3k6r_A 202 ---VRTHEFIPKALSIAKDGAIIHYHNTVPEKL------MPREPFETFKRITKEYGYDVEKL 254 (278)
T ss_dssp ---SSGGGGHHHHHHHEEEEEEEEEEEEEEGGG------TTTTTHHHHHHHHHHTTCEEEEE
T ss_pred ---CcHHHHHHHHHHHcCCCCEEEEEeeecccc------cchhHHHHHHHHHHHcCCcEEEE
Confidence 122347888899999999998765432111 11122345667777888876443
No 237
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.83 E-value=2.1e-08 Score=105.87 Aligned_cols=105 Identities=20% Similarity=0.259 Sum_probs=78.1
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEeecccCCCC-CCCCccEEEEc----
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQLPY-PSLSFDMVHCA---- 287 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl-~~~~~~~d~~~Lp~-~~~sFDlVvs~---- 287 (460)
.+|||+|||+|..+..+++.......|+++|+++.+++.++++ |+ .+.+...|...++. .+++||.|++.
T Consensus 119 ~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~PcS 198 (479)
T 2frx_A 119 QRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPCS 198 (479)
T ss_dssp SEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECCCC
T ss_pred CEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCCcC
Confidence 7999999999999999998632335899999999999988765 55 46677777766653 46789999972
Q ss_pred -cccc--------cccc--------cHHHHHHHHHHhcCCCcEEEEEeCCCC
Q 012571 288 -QCGI--------IWDK--------KEGIFLIEADRLLKPGGYFVLTSPESK 322 (460)
Q Consensus 288 -~~l~--------~~~~--------d~~~~L~ei~RvLkPGG~lvl~~~~~~ 322 (460)
...+ +|.+ ....+|.++.++|||||++++++....
T Consensus 199 g~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~ 250 (479)
T 2frx_A 199 GEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLN 250 (479)
T ss_dssp CGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCS
T ss_pred CcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCC
Confidence 1111 1110 013579999999999999999987543
No 238
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.81 E-value=1.6e-08 Score=100.27 Aligned_cols=87 Identities=16% Similarity=0.213 Sum_probs=65.0
Q ss_pred hHHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEe
Q 012571 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGN 268 (460)
Q Consensus 194 ~~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl-~~~~~~ 268 (460)
....+.+.+.+....+ .+|||||||+|.++..+++++ ..++++|+++.+++.++++ +. ++.+..
T Consensus 28 ~~i~~~i~~~~~~~~~--------~~VLDiG~G~G~lt~~La~~~---~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~ 96 (299)
T 2h1r_A 28 PGILDKIIYAAKIKSS--------DIVLEIGCGTGNLTVKLLPLA---KKVITIDIDSRMISEVKKRCLYEGYNNLEVYE 96 (299)
T ss_dssp HHHHHHHHHHHCCCTT--------CEEEEECCTTSTTHHHHTTTS---SEEEEECSCHHHHHHHHHHHHHTTCCCEEC--
T ss_pred HHHHHHHHHhcCCCCc--------CEEEEEcCcCcHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHHcCCCceEEEE
Confidence 4567777777766554 799999999999999999875 5899999999999988765 33 466777
Q ss_pred ecccCCCCCCCCccEEEEcccccccc
Q 012571 269 FISRQLPYPSLSFDMVHCAQCGIIWD 294 (460)
Q Consensus 269 ~d~~~Lp~~~~sFDlVvs~~~l~~~~ 294 (460)
+|...+++ .+||+|+++. -+++.
T Consensus 97 ~D~~~~~~--~~~D~Vv~n~-py~~~ 119 (299)
T 2h1r_A 97 GDAIKTVF--PKFDVCTANI-PYKIS 119 (299)
T ss_dssp --CCSSCC--CCCSEEEEEC-CGGGH
T ss_pred CchhhCCc--ccCCEEEEcC-Ccccc
Confidence 77777765 4799999974 45553
No 239
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.80 E-value=2.1e-08 Score=100.87 Aligned_cols=103 Identities=18% Similarity=0.212 Sum_probs=78.4
Q ss_pred CeEEEeCCCCchHHHHHHhccCc----eeEEEEeeCCHHHHHHHHHc----CCCeEEEeecccCCCCCCCCccEEEEccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLM----AVCVAVYEATGSQVQLALER----GLPAMIGNFISRQLPYPSLSFDMVHCAQC 289 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~----~~~v~giD~s~~~l~~A~~r----gl~~~~~~~d~~~Lp~~~~sFDlVvs~~~ 289 (460)
.+|||+|||+|.++..+++.... ...++|+|+++.+++.|+.+ ++.+.+...|.... ...+.||+|+++-.
T Consensus 132 ~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~-~~~~~fD~Ii~NPP 210 (344)
T 2f8l_A 132 VSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLAN-LLVDPVDVVISDLP 210 (344)
T ss_dssp EEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSC-CCCCCEEEEEEECC
T ss_pred CEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCc-cccCCccEEEECCC
Confidence 78999999999999988876321 26899999999999998764 66677777766543 34678999999854
Q ss_pred ccccccc----------------H-HHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 290 GIIWDKK----------------E-GIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 290 l~~~~~d----------------~-~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
+..+..+ . ..++.++.+.|||||++++..+..
T Consensus 211 fg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~ 259 (344)
T 2f8l_A 211 VGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA 259 (344)
T ss_dssp CSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG
T ss_pred CCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch
Confidence 3233111 1 147999999999999999998753
No 240
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.80 E-value=2.2e-08 Score=97.24 Aligned_cols=100 Identities=11% Similarity=0.056 Sum_probs=79.0
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCCeEEEeecccCCCCCCCCccEEEEcccccc
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQLPYPSLSFDMVHCAQCGII 292 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~ 292 (460)
+.+|||||||+|-++..++... ....++++|+++.|++.++++ |+...+...|...-+ +.+.||+|++.-.+.+
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~~-p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~-p~~~~DvaL~lkti~~ 210 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGLP-AETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR-LDEPADVTLLLKTLPC 210 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTCC-TTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC-CCSCCSEEEETTCHHH
T ss_pred CceeeeeccCccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccC-CCCCcchHHHHHHHHH
Confidence 4799999999999999988774 347899999999999988766 777777766654433 5688999999986666
Q ss_pred ccccHH-HHHHHHHHhcCCCcEEEEEeC
Q 012571 293 WDKKEG-IFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 293 ~~~d~~-~~L~ei~RvLkPGG~lvl~~~ 319 (460)
..++.. ..+ ++.+.|+|||.++-...
T Consensus 211 Le~q~kg~g~-~ll~aL~~~~vvVSfp~ 237 (281)
T 3lcv_B 211 LETQQRGSGW-EVIDIVNSPNIVVTFPT 237 (281)
T ss_dssp HHHHSTTHHH-HHHHHSSCSEEEEEEEC
T ss_pred hhhhhhHHHH-HHHHHhCCCCEEEeccc
Confidence 643332 345 99999999999887765
No 241
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.79 E-value=1.3e-08 Score=112.12 Aligned_cols=102 Identities=15% Similarity=0.140 Sum_probs=79.2
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCC---eEEEeecccC-CCCCCCCccEEEEccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP---AMIGNFISRQ-LPYPSLSFDMVHCAQC 289 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~---~~~~~~d~~~-Lp~~~~sFDlVvs~~~ 289 (460)
.+|||+|||+|.++..++..+. .+|+++|+|+.+++.|+++ ++. +.+..+|..+ ++...++||+|++.-.
T Consensus 541 ~~VLDlg~GtG~~sl~aa~~ga--~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP 618 (703)
T 3v97_A 541 KDFLNLFSYTGSATVHAGLGGA--RSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPP 618 (703)
T ss_dssp CEEEEESCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCC
T ss_pred CcEEEeeechhHHHHHHHHCCC--CEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCc
Confidence 6899999999999999998764 4799999999999999875 443 6777777655 3444678999998532
Q ss_pred c----------ccccccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 290 G----------IIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 290 l----------~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
. .....+...++.++.++|||||+++++....
T Consensus 619 ~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~ 660 (703)
T 3v97_A 619 TFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKR 660 (703)
T ss_dssp SBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCc
Confidence 1 1222345568999999999999999888753
No 242
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.79 E-value=1.9e-08 Score=103.29 Aligned_cols=102 Identities=20% Similarity=0.064 Sum_probs=77.8
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccCCCC----CCCCccEEEEc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPY----PSLSFDMVHCA 287 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~Lp~----~~~sFDlVvs~ 287 (460)
.+|||+|||+|.++..+++.+. .+++++|+++.+++.|+++ ++ .+.+..+|..++.. .+++||+|++.
T Consensus 219 ~~VLDl~~G~G~~~~~la~~g~--~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~d 296 (396)
T 2as0_A 219 DRVLDVFTYTGGFAIHAAIAGA--DEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLD 296 (396)
T ss_dssp CEEEETTCTTTHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CeEEEecCCCCHHHHHHHHCCC--CEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEEC
Confidence 7899999999999999998753 5899999999999988765 44 46777776654421 25789999985
Q ss_pred ccccc--------ccccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 288 QCGII--------WDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 288 ~~l~~--------~~~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
-.... ...+...++.++.++|+|||.++++....
T Consensus 297 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 297 PPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp CCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 22111 11344568999999999999999988754
No 243
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.79 E-value=1.2e-08 Score=98.13 Aligned_cols=97 Identities=10% Similarity=-0.039 Sum_probs=75.5
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCCeEEEeecccCCCCCCCCccEEEEcccccc
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQLPYPSLSFDMVHCAQCGII 292 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~ 292 (460)
+.+|||||||+|.++..+. ....++++|+++.+++.+++. +.+..+...|....+.+ ++||+|++.-++++
T Consensus 106 p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~-~~~DvvLllk~lh~ 180 (253)
T 3frh_A 106 PRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPA-EAGDLALIFKLLPL 180 (253)
T ss_dssp CSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCC-CBCSEEEEESCHHH
T ss_pred CCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCC-CCcchHHHHHHHHH
Confidence 4799999999999999887 226899999999999998766 66777777777666654 58999999876666
Q ss_pred ccccHHHHHHHHHHhcCCCcEEEEEe
Q 012571 293 WDKKEGIFLIEADRLLKPGGYFVLTS 318 (460)
Q Consensus 293 ~~~d~~~~L~ei~RvLkPGG~lvl~~ 318 (460)
..........++.+.|+++|.++-..
T Consensus 181 LE~q~~~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 181 LEREQAGSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp HHHHSTTHHHHHHHHCBCSEEEEEEE
T ss_pred hhhhchhhHHHHHHHhcCCCEEEEcC
Confidence 64222234448889999998777665
No 244
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.77 E-value=2.8e-08 Score=101.66 Aligned_cols=101 Identities=23% Similarity=0.162 Sum_probs=76.9
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCC-eEEEeecccCCCC----CCCCccEEEEcc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP-AMIGNFISRQLPY----PSLSFDMVHCAQ 288 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~-~~~~~~d~~~Lp~----~~~sFDlVvs~~ 288 (460)
.+|||+|||+|.++..++.. ..+++++|+++.+++.|+++ ++. +.+..+|...+.. .+++||+|++.-
T Consensus 211 ~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dp 287 (382)
T 1wxx_A 211 ERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDP 287 (382)
T ss_dssp EEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECC
Confidence 68999999999999999987 36899999999999998765 443 6677776654421 257899999852
Q ss_pred cccc--------ccccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 289 CGII--------WDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 289 ~l~~--------~~~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
.... ...+...++.++.++|+|||.++++....
T Consensus 288 P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 288 PAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp CCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 1111 11334568999999999999999998754
No 245
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.73 E-value=3.6e-08 Score=94.71 Aligned_cols=82 Identities=20% Similarity=0.204 Sum_probs=63.3
Q ss_pred hHHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcC---CCeEEEeec
Q 012571 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---LPAMIGNFI 270 (460)
Q Consensus 194 ~~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rg---l~~~~~~~d 270 (460)
....+.+.+.+....+ .+|||||||+|.++..+++++ ..++++|+++.+++.++++. .++.+..+|
T Consensus 16 ~~~~~~i~~~~~~~~~--------~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D 84 (244)
T 1qam_A 16 KHNIDKIMTNIRLNEH--------DNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKD 84 (244)
T ss_dssp HHHHHHHHTTCCCCTT--------CEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTTCCSEEEECCC
T ss_pred HHHHHHHHHhCCCCCC--------CEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhccCCCeEEEECh
Confidence 4456666665554443 789999999999999999986 58999999999999998763 357788888
Q ss_pred ccCCCCCC-CCccEEEEc
Q 012571 271 SRQLPYPS-LSFDMVHCA 287 (460)
Q Consensus 271 ~~~Lp~~~-~sFDlVvs~ 287 (460)
..++++++ ..| .|+++
T Consensus 85 ~~~~~~~~~~~~-~vv~n 101 (244)
T 1qam_A 85 ILQFKFPKNQSY-KIFGN 101 (244)
T ss_dssp GGGCCCCSSCCC-EEEEE
T ss_pred HHhCCcccCCCe-EEEEe
Confidence 88888764 455 45554
No 246
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.70 E-value=1e-09 Score=105.35 Aligned_cols=113 Identities=17% Similarity=0.163 Sum_probs=81.9
Q ss_pred HHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcC---CCeEEEeecc
Q 012571 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---LPAMIGNFIS 271 (460)
Q Consensus 195 ~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rg---l~~~~~~~d~ 271 (460)
...+.+.+.+....+ .+|||||||+|.++..+++.+ .+++|+|+++.+++.|+++. ..+.+..+|.
T Consensus 16 ~~~~~i~~~~~~~~~--------~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~ 84 (245)
T 1yub_A 16 KVLNQIIKQLNLKET--------DTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDI 84 (245)
T ss_dssp TTHHHHHHHCCCCSS--------EEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCC
T ss_pred HHHHHHHHhcCCCCC--------CEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHHHHHHHHHhccCCceEEEECCh
Confidence 456667777665544 789999999999999999886 58999999999998886652 2467778888
Q ss_pred cCCCCCC-CCccEEEEcccccccc-----------ccHHHHH----HHHHHhcCCCcEEEEEeCC
Q 012571 272 RQLPYPS-LSFDMVHCAQCGIIWD-----------KKEGIFL----IEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 272 ~~Lp~~~-~sFDlVvs~~~l~~~~-----------~d~~~~L----~ei~RvLkPGG~lvl~~~~ 320 (460)
.++++++ ++| .|+++- -++.. .....++ +.+.|+|||||.+.+....
T Consensus 85 ~~~~~~~~~~f-~vv~n~-Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~~~ 147 (245)
T 1yub_A 85 LQFQFPNKQRY-KIVGNI-PYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLLHT 147 (245)
T ss_dssp TTTTCCCSSEE-EEEEEC-CSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHTTT
T ss_pred hhcCcccCCCc-EEEEeC-CccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhhee
Confidence 8888764 688 666652 11111 1222234 6699999999998876643
No 247
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.68 E-value=8.5e-08 Score=94.80 Aligned_cols=91 Identities=14% Similarity=-0.004 Sum_probs=63.4
Q ss_pred CeEEEeCCCC------chHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEE-EeecccCCCCCCCCccEEEEcccc
Q 012571 218 QSVLDVGCGF------GSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMI-GNFISRQLPYPSLSFDMVHCAQCG 290 (460)
Q Consensus 218 ~~VLDIGCGt------G~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~-~~~d~~~Lp~~~~sFDlVvs~~~l 290 (460)
.+|||+|||+ |. ..+++.......|+|+|+++. + .+ +.+ ..+|...++++ ++||+|++...
T Consensus 65 ~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v-----~~--v~~~i~gD~~~~~~~-~~fD~Vvsn~~- 132 (290)
T 2xyq_A 65 MRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V-----SD--ADSTLIGDCATVHTA-NKWDLIISDMY- 132 (290)
T ss_dssp CEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B-----CS--SSEEEESCGGGCCCS-SCEEEEEECCC-
T ss_pred CEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C-----CC--CEEEEECccccCCcc-CcccEEEEcCC-
Confidence 7999999944 76 334443222368999999997 2 23 445 66777777764 78999999632
Q ss_pred cccc-----------ccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 291 IIWD-----------KKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 291 ~~~~-----------~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
.++. .....+++++.|+|||||.|++....
T Consensus 133 ~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~ 173 (290)
T 2xyq_A 133 DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITE 173 (290)
T ss_dssp CCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred ccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 2210 11246899999999999999998764
No 248
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.67 E-value=2.8e-08 Score=101.91 Aligned_cols=114 Identities=23% Similarity=0.153 Sum_probs=81.2
Q ss_pred hHHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccC
Q 012571 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQ 273 (460)
Q Consensus 194 ~~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~ 273 (460)
....+.+.+.+....+ .+|||+|||+|.++..++++......++|+|+++.+++.| ..+.+...|...
T Consensus 25 ~~l~~~~~~~~~~~~~--------~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----~~~~~~~~D~~~ 92 (421)
T 2ih2_A 25 PEVVDFMVSLAEAPRG--------GRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----PWAEGILADFLL 92 (421)
T ss_dssp HHHHHHHHHHCCCCTT--------CEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----TTEEEEESCGGG
T ss_pred HHHHHHHHHhhccCCC--------CEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----CCCcEEeCChhh
Confidence 4566667766654222 6899999999999999998631236899999999998877 345666666666
Q ss_pred CCCCCCCccEEEEccccc--c--------cccc------------------HHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 274 LPYPSLSFDMVHCAQCGI--I--------WDKK------------------EGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 274 Lp~~~~sFDlVvs~~~l~--~--------~~~d------------------~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
.+ +++.||+|+++--.. + ..++ ...++..+.++|+|||.+++..+.
T Consensus 93 ~~-~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 93 WE-PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp CC-CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred cC-ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 54 357899999961111 1 1111 114688999999999999999885
No 249
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.67 E-value=2e-07 Score=96.96 Aligned_cols=93 Identities=18% Similarity=0.227 Sum_probs=71.1
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCCeEEEeecccCCCCCCCCccEEEEccccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIW 293 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~ 293 (460)
.+|||+|||+|.++..+++.+ ..++|+|+++.+++.|+++ ++.+.+..+|..++.. .+||+|++.-.....
T Consensus 292 ~~VLDlgcG~G~~sl~la~~~---~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~--~~fD~Vv~dPPr~g~ 366 (425)
T 2jjq_A 292 EKILDMYSGVGTFGIYLAKRG---FNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSV--KGFDTVIVDPPRAGL 366 (425)
T ss_dssp SEEEEETCTTTHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCC--TTCSEEEECCCTTCS
T ss_pred CEEEEeeccchHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCc--cCCCEEEEcCCccch
Confidence 789999999999999999874 5899999999999988765 5557777788777642 289999986321111
Q ss_pred cccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 294 DKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 294 ~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
...+++.+. .|+|||.++++..
T Consensus 367 ---~~~~~~~l~-~l~p~givyvsc~ 388 (425)
T 2jjq_A 367 ---HPRLVKRLN-REKPGVIVYVSCN 388 (425)
T ss_dssp ---CHHHHHHHH-HHCCSEEEEEESC
T ss_pred ---HHHHHHHHH-hcCCCcEEEEECC
Confidence 123555554 5999999999864
No 250
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.64 E-value=1.4e-07 Score=94.79 Aligned_cols=92 Identities=15% Similarity=0.104 Sum_probs=73.9
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEeecccCCCCCCCCccEEEEccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl--~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~ 291 (460)
.+|||+|||+|.++.. ++ + ...++++|+++.+++.|+++ ++ .+.+..+|..... ++||+|++.-.
T Consensus 197 ~~VLDlg~G~G~~~l~-a~-~--~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP-- 267 (336)
T 2yx1_A 197 DVVVDMFAGVGPFSIA-CK-N--AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLP-- 267 (336)
T ss_dssp CEEEETTCTTSHHHHH-TT-T--SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCT--
T ss_pred CEEEEccCccCHHHHh-cc-C--CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCc--
Confidence 7899999999999999 77 3 36899999999999998765 44 4777777777665 78999998631
Q ss_pred cccccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 292 IWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 292 ~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
. ....++.++.++|+|||.+++.+...
T Consensus 268 ~---~~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 268 K---FAHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp T---TGGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred H---hHHHHHHHHHHHcCCCCEEEEEEeec
Confidence 1 11258899999999999999987643
No 251
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.63 E-value=2.2e-07 Score=96.66 Aligned_cols=109 Identities=18% Similarity=0.216 Sum_probs=78.5
Q ss_pred HHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEee
Q 012571 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNF 269 (460)
Q Consensus 195 ~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl-~~~~~~~ 269 (460)
.+++.+.+.+....+ .+|||+|||+|.++..|++.+ ..++|+|+|+.+++.|+++ ++ ++.+..+
T Consensus 273 ~l~~~~~~~l~~~~~--------~~VLDlgcG~G~~~~~la~~~---~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~ 341 (433)
T 1uwv_A 273 KMVARALEWLDVQPE--------DRVLDLFCGMGNFTLPLATQA---ASVVGVEGVPALVEKGQQNARLNGLQNVTFYHE 341 (433)
T ss_dssp HHHHHHHHHHTCCTT--------CEEEEESCTTTTTHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred HHHHHHHHhhcCCCC--------CEEEECCCCCCHHHHHHHhhC---CEEEEEeCCHHHHHHHHHHHHHcCCCceEEEEC
Confidence 455555666654433 789999999999999999874 6899999999999998765 44 4777777
Q ss_pred cccC----CCCCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 270 ISRQ----LPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 270 d~~~----Lp~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
|..+ +++++++||+|++.--.... ..+++.+.+ ++|++.++++..
T Consensus 342 d~~~~l~~~~~~~~~fD~Vv~dPPr~g~----~~~~~~l~~-~~p~~ivyvsc~ 390 (433)
T 1uwv_A 342 NLEEDVTKQPWAKNGFDKVLLDPARAGA----AGVMQQIIK-LEPIRIVYVSCN 390 (433)
T ss_dssp CTTSCCSSSGGGTTCCSEEEECCCTTCC----HHHHHHHHH-HCCSEEEEEESC
T ss_pred CHHHHhhhhhhhcCCCCEEEECCCCccH----HHHHHHHHh-cCCCeEEEEECC
Confidence 7665 34566789999986321111 235555543 789999888764
No 252
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.60 E-value=7.8e-08 Score=95.30 Aligned_cols=88 Identities=22% Similarity=0.115 Sum_probs=72.6
Q ss_pred hHHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc---CCCeEEEeec
Q 012571 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER---GLPAMIGNFI 270 (460)
Q Consensus 194 ~~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r---gl~~~~~~~d 270 (460)
....+.+.+.+....+ .+|||||||+|.++..|++++ .+|+++|+++.+++.++++ ..++.+..+|
T Consensus 36 ~~i~~~Iv~~l~~~~~--------~~VLEIG~G~G~lT~~La~~~---~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD 104 (295)
T 3gru_A 36 KNFVNKAVESANLTKD--------DVVLEIGLGKGILTEELAKNA---KKVYVIEIDKSLEPYANKLKELYNNIEIIWGD 104 (295)
T ss_dssp HHHHHHHHHHTTCCTT--------CEEEEECCTTSHHHHHHHHHS---SEEEEEESCGGGHHHHHHHHHHCSSEEEEESC
T ss_pred HHHHHHHHHhcCCCCc--------CEEEEECCCchHHHHHHHhcC---CEEEEEECCHHHHHHHHHHhccCCCeEEEECc
Confidence 4567778887776555 799999999999999999985 5899999999999998776 2467888888
Q ss_pred ccCCCCCCCCccEEEEccccccc
Q 012571 271 SRQLPYPSLSFDMVHCAQCGIIW 293 (460)
Q Consensus 271 ~~~Lp~~~~sFDlVvs~~~l~~~ 293 (460)
...+++++.+||.|+++. -+++
T Consensus 105 ~l~~~~~~~~fD~Iv~Nl-Py~i 126 (295)
T 3gru_A 105 ALKVDLNKLDFNKVVANL-PYQI 126 (295)
T ss_dssp TTTSCGGGSCCSEEEEEC-CGGG
T ss_pred hhhCCcccCCccEEEEeC-cccc
Confidence 888888888899999874 3444
No 253
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.58 E-value=1.4e-07 Score=98.39 Aligned_cols=124 Identities=20% Similarity=0.158 Sum_probs=87.0
Q ss_pred cccccchhHHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhcc------------CceeEEEEeeCCHHHH
Q 012571 187 GLVFDGVKDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLK------------LMAVCVAVYEATGSQV 254 (460)
Q Consensus 187 ~~~fd~~~~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g------------~~~~~v~giD~s~~~l 254 (460)
+.+|.. ....+.+.+.+....+ .+|||.|||+|.++..+++.- .....++|+|+++.++
T Consensus 151 G~fyTP-~~v~~~mv~~l~~~~~--------~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~ 221 (445)
T 2okc_A 151 GQYFTP-RPLIQAMVDCINPQMG--------ETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVV 221 (445)
T ss_dssp GGGCCC-HHHHHHHHHHHCCCTT--------CCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHH
T ss_pred CcccCc-HHHHHHHHHHhCCCCC--------CEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHH
Confidence 344432 3456677777765443 689999999999998887641 0124689999999999
Q ss_pred HHHHHc----CC---CeEEEeecccCCCCCCCCccEEEEccccccc--ccc--------------HHHHHHHHHHhcCCC
Q 012571 255 QLALER----GL---PAMIGNFISRQLPYPSLSFDMVHCAQCGIIW--DKK--------------EGIFLIEADRLLKPG 311 (460)
Q Consensus 255 ~~A~~r----gl---~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~--~~d--------------~~~~L~ei~RvLkPG 311 (460)
+.|+.+ ++ ...+..+|+...+.. +.||+|+++-...+. ... ...++..+.+.||||
T Consensus 222 ~lA~~nl~l~g~~~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~g 300 (445)
T 2okc_A 222 TLASMNLYLHGIGTDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTG 300 (445)
T ss_dssp HHHHHHHHHTTCCSSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEE
T ss_pred HHHHHHHHHhCCCcCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccC
Confidence 988754 55 456666776665543 489999998432221 111 125899999999999
Q ss_pred cEEEEEeCC
Q 012571 312 GYFVLTSPE 320 (460)
Q Consensus 312 G~lvl~~~~ 320 (460)
|++++..|.
T Consensus 301 G~~a~V~p~ 309 (445)
T 2okc_A 301 GRAAVVLPD 309 (445)
T ss_dssp EEEEEEEEH
T ss_pred CEEEEEECC
Confidence 999998873
No 254
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.49 E-value=4e-07 Score=88.25 Aligned_cols=82 Identities=16% Similarity=0.125 Sum_probs=66.8
Q ss_pred hHHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc---CCCeEEEeec
Q 012571 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER---GLPAMIGNFI 270 (460)
Q Consensus 194 ~~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r---gl~~~~~~~d 270 (460)
....+.+.+.+....+ .+|||||||+|.++..|++++ .+++++|+++.|++.++++ ..++.+..+|
T Consensus 15 ~~i~~~iv~~~~~~~~--------~~VLEIG~G~G~lt~~La~~~---~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D 83 (255)
T 3tqs_A 15 SFVLQKIVSAIHPQKT--------DTLVEIGPGRGALTDYLLTEC---DNLALVEIDRDLVAFLQKKYNQQKNITIYQND 83 (255)
T ss_dssp HHHHHHHHHHHCCCTT--------CEEEEECCTTTTTHHHHTTTS---SEEEEEECCHHHHHHHHHHHTTCTTEEEEESC
T ss_pred HHHHHHHHHhcCCCCc--------CEEEEEcccccHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcc
Confidence 4577778888877655 789999999999999999986 5899999999999999876 2467888888
Q ss_pred ccCCCCCC----CCccEEEEc
Q 012571 271 SRQLPYPS----LSFDMVHCA 287 (460)
Q Consensus 271 ~~~Lp~~~----~sFDlVvs~ 287 (460)
...+++++ +.|| |+++
T Consensus 84 ~~~~~~~~~~~~~~~~-vv~N 103 (255)
T 3tqs_A 84 ALQFDFSSVKTDKPLR-VVGN 103 (255)
T ss_dssp TTTCCGGGSCCSSCEE-EEEE
T ss_pred hHhCCHHHhccCCCeE-EEec
Confidence 88887643 5688 6665
No 255
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.44 E-value=3.4e-07 Score=92.92 Aligned_cols=103 Identities=17% Similarity=0.041 Sum_probs=73.9
Q ss_pred CCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCC-------------CeEEEeecccCCCC----CC
Q 012571 216 GVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGL-------------PAMIGNFISRQLPY----PS 278 (460)
Q Consensus 216 ~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl-------------~~~~~~~d~~~Lp~----~~ 278 (460)
.+++|||||||+|.++..+++.+. .+++.+|+++.+++.|++.-. ++.+...|....-- .+
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~--~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKP--KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC--SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEEECChhHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 358999999999999999998864 689999999999999987621 35555555544221 35
Q ss_pred CCccEEEEcccccccc--c---cHHHHHHHH----HHhcCCCcEEEEEeCC
Q 012571 279 LSFDMVHCAQCGIIWD--K---KEGIFLIEA----DRLLKPGGYFVLTSPE 320 (460)
Q Consensus 279 ~sFDlVvs~~~l~~~~--~---d~~~~L~ei----~RvLkPGG~lvl~~~~ 320 (460)
++||+|++--.-.... + ....+++++ .++|+|||.+++....
T Consensus 266 ~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred CCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 7899999863211221 1 113466666 8999999999987653
No 256
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.42 E-value=1.1e-06 Score=90.22 Aligned_cols=102 Identities=12% Similarity=0.087 Sum_probs=76.2
Q ss_pred CeEEEeCCCCchHHHHHHhccCc-------------------------------------eeEEEEeeCCHHHHHHHHHc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLM-------------------------------------AVCVAVYEATGSQVQLALER 260 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~-------------------------------------~~~v~giD~s~~~l~~A~~r 260 (460)
.+|||.|||+|.++..++..+.. ...++|+|+++.+++.|+++
T Consensus 197 ~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~N 276 (385)
T 3ldu_A 197 RVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIAREN 276 (385)
T ss_dssp SCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHHHH
T ss_pred CeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHHHH
Confidence 78999999999999888765321 14699999999999999765
Q ss_pred ----CC--CeEEEeecccCCCCCCCCccEEEEccccc-ccc--ccHHHHHHHHHHhcCC--CcEEEEEeCC
Q 012571 261 ----GL--PAMIGNFISRQLPYPSLSFDMVHCAQCGI-IWD--KKEGIFLIEADRLLKP--GGYFVLTSPE 320 (460)
Q Consensus 261 ----gl--~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~-~~~--~d~~~~L~ei~RvLkP--GG~lvl~~~~ 320 (460)
++ .+.+...|..+++.+ ++||+|+++--.. ... .+...+++++.++||+ ||.+++....
T Consensus 277 a~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 346 (385)
T 3ldu_A 277 AEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITSY 346 (385)
T ss_dssp HHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEESC
T ss_pred HHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEECC
Confidence 55 477888888888754 5899999973211 111 2344577778888877 8888888763
No 257
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.42 E-value=1.4e-06 Score=89.65 Aligned_cols=102 Identities=10% Similarity=0.058 Sum_probs=74.7
Q ss_pred CeEEEeCCCCchHHHHHHhccCc-------------------------------------eeEEEEeeCCHHHHHHHHHc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLM-------------------------------------AVCVAVYEATGSQVQLALER 260 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~-------------------------------------~~~v~giD~s~~~l~~A~~r 260 (460)
..|||.+||+|.++..++..+.. ...++|+|+++.+++.|+++
T Consensus 203 ~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~N 282 (393)
T 3k0b_A 203 RPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQN 282 (393)
T ss_dssp SCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHH
T ss_pred CeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHHHH
Confidence 78999999999999887765321 14599999999999999765
Q ss_pred ----CC--CeEEEeecccCCCCCCCCccEEEEcccc-cccc--ccHHHHHHHHHHhcCC--CcEEEEEeCC
Q 012571 261 ----GL--PAMIGNFISRQLPYPSLSFDMVHCAQCG-IIWD--KKEGIFLIEADRLLKP--GGYFVLTSPE 320 (460)
Q Consensus 261 ----gl--~~~~~~~d~~~Lp~~~~sFDlVvs~~~l-~~~~--~d~~~~L~ei~RvLkP--GG~lvl~~~~ 320 (460)
|+ .+.+...|..+++.+ ++||+|+++--. .... .+...+++++.+.||+ ||.+++....
T Consensus 283 a~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 352 (393)
T 3k0b_A 283 AVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTSY 352 (393)
T ss_dssp HHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEECC
T ss_pred HHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 54 367888888888764 589999998311 1111 2334567777777776 9988888763
No 258
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.40 E-value=2.1e-06 Score=88.10 Aligned_cols=102 Identities=14% Similarity=0.162 Sum_probs=76.3
Q ss_pred CeEEEeCCCCchHHHHHHhccCc-------------------------------------eeEEEEeeCCHHHHHHHHHc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLM-------------------------------------AVCVAVYEATGSQVQLALER 260 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~-------------------------------------~~~v~giD~s~~~l~~A~~r 260 (460)
..+||.+||+|.++...+..+.. ...++|+|+++.+++.|+++
T Consensus 196 ~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~N 275 (384)
T 3ldg_A 196 KPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIARKN 275 (384)
T ss_dssp SCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHH
T ss_pred CeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHHHH
Confidence 78999999999999887765321 14599999999999998765
Q ss_pred ----CC--CeEEEeecccCCCCCCCCccEEEEcccc-cccc--ccHHHHHHHHHHhcCC--CcEEEEEeCC
Q 012571 261 ----GL--PAMIGNFISRQLPYPSLSFDMVHCAQCG-IIWD--KKEGIFLIEADRLLKP--GGYFVLTSPE 320 (460)
Q Consensus 261 ----gl--~~~~~~~d~~~Lp~~~~sFDlVvs~~~l-~~~~--~d~~~~L~ei~RvLkP--GG~lvl~~~~ 320 (460)
|+ .+.+...|..+++.+ .+||+|+++--. .... .+...+++++.+.||+ ||.+++..+.
T Consensus 276 a~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 345 (384)
T 3ldg_A 276 AREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTND 345 (384)
T ss_dssp HHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEESC
T ss_pred HHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEECC
Confidence 54 377888888888765 489999997211 1121 2345677778888877 9999988873
No 259
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.38 E-value=6.3e-07 Score=91.17 Aligned_cols=93 Identities=14% Similarity=0.150 Sum_probs=67.4
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEeecccCCC--CCC------------
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQLP--YPS------------ 278 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl-~~~~~~~d~~~Lp--~~~------------ 278 (460)
.+|||+|||+|.++..+++.. ..|+++|+++.+++.|+++ ++ ++.+..+|..++. +..
T Consensus 215 ~~vLDl~cG~G~~~l~la~~~---~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~ 291 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLALARNF---DRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDL 291 (369)
T ss_dssp SEEEEESCTTSHHHHHHGGGS---SEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCG
T ss_pred CEEEEccCCCCHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhcccccccccccc
Confidence 579999999999999998753 5899999999999988764 44 4667666654431 111
Q ss_pred --CCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 279 --LSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 279 --~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
++||+|++.-- . ..+..++.+.|+++|.+++....
T Consensus 292 ~~~~fD~Vv~dPP------r-~g~~~~~~~~l~~~g~ivyvsc~ 328 (369)
T 3bt7_A 292 KSYQCETIFVDPP------R-SGLDSETEKMVQAYPRILYISCN 328 (369)
T ss_dssp GGCCEEEEEECCC------T-TCCCHHHHHHHTTSSEEEEEESC
T ss_pred ccCCCCEEEECcC------c-cccHHHHHHHHhCCCEEEEEECC
Confidence 37999987421 1 11345677788899999888763
No 260
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.37 E-value=1.3e-06 Score=85.42 Aligned_cols=88 Identities=19% Similarity=0.144 Sum_probs=69.5
Q ss_pred hhHHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc--CCCeEEEeec
Q 012571 193 VKDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER--GLPAMIGNFI 270 (460)
Q Consensus 193 ~~~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r--gl~~~~~~~d 270 (460)
.....+.+.+.+.... . +|||||||+|.++..|++++ .+++++|+++.|++.++++ +.++.+..+|
T Consensus 32 d~~i~~~Iv~~~~~~~--------~-~VLEIG~G~G~lt~~L~~~~---~~V~avEid~~~~~~l~~~~~~~~v~vi~~D 99 (271)
T 3fut_A 32 SEAHLRRIVEAARPFT--------G-PVFEVGPGLGALTRALLEAG---AEVTAIEKDLRLRPVLEETLSGLPVRLVFQD 99 (271)
T ss_dssp CHHHHHHHHHHHCCCC--------S-CEEEECCTTSHHHHHHHHTT---CCEEEEESCGGGHHHHHHHTTTSSEEEEESC
T ss_pred CHHHHHHHHHhcCCCC--------C-eEEEEeCchHHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcCCCCEEEEECC
Confidence 3557777887776532 3 89999999999999999986 5799999999999999876 3357788888
Q ss_pred ccCCCCCCC-CccEEEEccccccc
Q 012571 271 SRQLPYPSL-SFDMVHCAQCGIIW 293 (460)
Q Consensus 271 ~~~Lp~~~~-sFDlVvs~~~l~~~ 293 (460)
...+++++. .+|.|+++. -+++
T Consensus 100 ~l~~~~~~~~~~~~iv~Nl-Py~i 122 (271)
T 3fut_A 100 ALLYPWEEVPQGSLLVANL-PYHI 122 (271)
T ss_dssp GGGSCGGGSCTTEEEEEEE-CSSC
T ss_pred hhhCChhhccCccEEEecC-cccc
Confidence 888887643 689999884 3444
No 261
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.36 E-value=3e-06 Score=84.39 Aligned_cols=103 Identities=10% Similarity=-0.029 Sum_probs=71.4
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEeecccCCCCCC---CCccEEEEc--
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQLPYPS---LSFDMVHCA-- 287 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl-~~~~~~~d~~~Lp~~~---~sFDlVvs~-- 287 (460)
.+|||+|||+|..+..+++.-.....|+++|+++.+++.++++ ++ .+.+...|...++... ++||.|++.
T Consensus 104 ~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl~D~P 183 (309)
T 2b9e_A 104 SHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILLDPS 183 (309)
T ss_dssp CEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEEECCC
T ss_pred CEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEEEcCC
Confidence 7999999999999999988622235899999999999988765 54 4667777776665322 579999972
Q ss_pred ---cccccc----------c-ccH-------HHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 288 ---QCGIIW----------D-KKE-------GIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 288 ---~~l~~~----------~-~d~-------~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
.....- . .+. ..+|..+.++|+ ||+++.++-..
T Consensus 184 cSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~ 237 (309)
T 2b9e_A 184 CSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSL 237 (309)
T ss_dssp CCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCC
T ss_pred cCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCC
Confidence 111110 0 111 135777778887 99999887643
No 262
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.33 E-value=6.3e-07 Score=87.36 Aligned_cols=101 Identities=17% Similarity=0.188 Sum_probs=66.1
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHH---cCCCeEEEeecccCCCCCCCCccEEEEcccccc--
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALE---RGLPAMIGNFISRQLPYPSLSFDMVHCAQCGII-- 292 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~---rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~-- 292 (460)
.+|||+|||+|.|+...+++. ....+.++|++..+...... .+.++.....+++...++++.||+|+|.. ..+
T Consensus 76 ~~VLDLGaAPGGWSQvAa~~~-~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~-apnsG 153 (277)
T 3evf_A 76 GRVIDLGCGRGGWCYYAAAQK-EVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHRLEPVKCDTLLCDI-GESSS 153 (277)
T ss_dssp EEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECC-CCCCS
T ss_pred CEEEEecCCCCHHHHHHHHhc-CCCcceeEEEeccCcccccccCcCCCCeEEEeccceehhcCCCCccEEEecC-ccCcC
Confidence 689999999999999988762 22567788887443111111 01233333333344556788999999975 233
Q ss_pred --ccccHH--HHHHHHHHhcCCC-cEEEEEeCC
Q 012571 293 --WDKKEG--IFLIEADRLLKPG-GYFVLTSPE 320 (460)
Q Consensus 293 --~~~d~~--~~L~ei~RvLkPG-G~lvl~~~~ 320 (460)
+.+... .+|+.+.++|||| |.|++-...
T Consensus 154 ~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 154 SSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred chHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 333322 2578889999999 999997764
No 263
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.29 E-value=1.3e-06 Score=85.81 Aligned_cols=77 Identities=12% Similarity=0.117 Sum_probs=61.4
Q ss_pred hHHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCc-eeEEEEeeCCHHHHHHHHHc-CCCeEEEeecc
Q 012571 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLM-AVCVAVYEATGSQVQLALER-GLPAMIGNFIS 271 (460)
Q Consensus 194 ~~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~-~~~v~giD~s~~~l~~A~~r-gl~~~~~~~d~ 271 (460)
....+.+.+.+....+ .+|||||||+|.++..|++++.. ...++++|+++.|++.++++ ..++.+..+|.
T Consensus 28 ~~i~~~iv~~~~~~~~--------~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~ 99 (279)
T 3uzu_A 28 HGVIDAIVAAIRPERG--------ERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDA 99 (279)
T ss_dssp HHHHHHHHHHHCCCTT--------CEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCG
T ss_pred HHHHHHHHHhcCCCCc--------CEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECCh
Confidence 4577788888876655 79999999999999999988632 13399999999999999877 34577888888
Q ss_pred cCCCCCC
Q 012571 272 RQLPYPS 278 (460)
Q Consensus 272 ~~Lp~~~ 278 (460)
..+++++
T Consensus 100 ~~~~~~~ 106 (279)
T 3uzu_A 100 LTFDFGS 106 (279)
T ss_dssp GGCCGGG
T ss_pred hcCChhH
Confidence 8887643
No 264
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.23 E-value=3.7e-06 Score=91.20 Aligned_cols=119 Identities=18% Similarity=0.160 Sum_probs=75.0
Q ss_pred HHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchH---HHHHHhccCceeEEEEeeCCHHHHHHHHHc------CCCeE
Q 012571 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSF---GAHLVSLKLMAVCVAVYEATGSQVQLALER------GLPAM 265 (460)
Q Consensus 195 ~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~---a~~La~~g~~~~~v~giD~s~~~l~~A~~r------gl~~~ 265 (460)
.|.+.|.+.+.......-.......|||||||+|.+ +...++++....+|+++|-++. ...|++. +-.+.
T Consensus 336 ~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~-A~~a~~~v~~N~~~dkVt 414 (637)
T 4gqb_A 336 QYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN-AVVTLENWQFEEWGSQVT 414 (637)
T ss_dssp HHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH-HHHHHHHHHHHTTGGGEE
T ss_pred HHHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH-HHHHHHHHHhccCCCeEE
Confidence 455556555432111011112235799999999988 4444444445568999999974 4444432 33577
Q ss_pred EEeecccCCCCCCCCccEEEEccccccc-cccHHHHHHHHHHhcCCCcEEE
Q 012571 266 IGNFISRQLPYPSLSFDMVHCAQCGIIW-DKKEGIFLIEADRLLKPGGYFV 315 (460)
Q Consensus 266 ~~~~d~~~Lp~~~~sFDlVvs~~~l~~~-~~d~~~~L~ei~RvLkPGG~lv 315 (460)
+..++.+++..| +.+|+|++=...... .+.....+....|.|||||.++
T Consensus 415 VI~gd~eev~LP-EKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 415 VVSSDMREWVAP-EKADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EEESCTTTCCCS-SCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EEeCcceeccCC-cccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 888888888765 679999995322111 1223357778899999999875
No 265
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.21 E-value=6.9e-06 Score=79.15 Aligned_cols=75 Identities=20% Similarity=0.204 Sum_probs=60.9
Q ss_pred hHHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc-CCCeEEEeeccc
Q 012571 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER-GLPAMIGNFISR 272 (460)
Q Consensus 194 ~~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r-gl~~~~~~~d~~ 272 (460)
....+.+.+.+....+ .+|||||||+|.++..+++++ ...++++|+++.+++.++++ ..++.+..+|..
T Consensus 17 ~~i~~~iv~~~~~~~~--------~~VLDiG~G~G~lt~~L~~~~--~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~ 86 (249)
T 3ftd_A 17 EGVLKKIAEELNIEEG--------NTVVEVGGGTGNLTKVLLQHP--LKKLYVIELDREMVENLKSIGDERLEVINEDAS 86 (249)
T ss_dssp HHHHHHHHHHTTCCTT--------CEEEEEESCHHHHHHHHTTSC--CSEEEEECCCHHHHHHHTTSCCTTEEEECSCTT
T ss_pred HHHHHHHHHhcCCCCc--------CEEEEEcCchHHHHHHHHHcC--CCeEEEEECCHHHHHHHHhccCCCeEEEEcchh
Confidence 4567778877776554 789999999999999999884 25899999999999999876 234678888888
Q ss_pred CCCCCC
Q 012571 273 QLPYPS 278 (460)
Q Consensus 273 ~Lp~~~ 278 (460)
.+++++
T Consensus 87 ~~~~~~ 92 (249)
T 3ftd_A 87 KFPFCS 92 (249)
T ss_dssp TCCGGG
T ss_pred hCChhH
Confidence 888764
No 266
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.19 E-value=5.9e-06 Score=84.93 Aligned_cols=97 Identities=15% Similarity=0.140 Sum_probs=72.4
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCC---eEEEeecccCCC--CCCCCccEEEEcc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP---AMIGNFISRQLP--YPSLSFDMVHCAQ 288 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~---~~~~~~d~~~Lp--~~~~sFDlVvs~~ 288 (460)
.+|||++||+|.++..++.+......|+++|+++..++.++++ ++. +.+...|+..+- ...+.||+|++.-
T Consensus 54 ~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~lDP 133 (392)
T 3axs_A 54 VKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDLDP 133 (392)
T ss_dssp EEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEECC
T ss_pred CEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEECC
Confidence 7899999999999999998622235799999999999988765 553 666666654321 1245799999753
Q ss_pred ccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 289 CGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 289 ~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
. .....++..+.+.|+|||+++++..
T Consensus 134 ----~-g~~~~~l~~a~~~Lk~gGll~~t~t 159 (392)
T 3axs_A 134 ----F-GTPVPFIESVALSMKRGGILSLTAT 159 (392)
T ss_dssp ----S-SCCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ----C-cCHHHHHHHHHHHhCCCCEEEEEec
Confidence 1 1234588999999999998888763
No 267
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.18 E-value=3.7e-06 Score=85.84 Aligned_cols=106 Identities=16% Similarity=0.198 Sum_probs=70.0
Q ss_pred CCeEEEeCCCCchHHHHHHhc--------------cCceeEEEEeeCCHHHHHHH-HHc------------------CCC
Q 012571 217 VQSVLDVGCGFGSFGAHLVSL--------------KLMAVCVAVYEATGSQVQLA-LER------------------GLP 263 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~--------------g~~~~~v~giD~s~~~l~~A-~~r------------------gl~ 263 (460)
..+|+|+|||+|.++..+... .....+|...|...+..... +.- +.-
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 478999999999998877332 12457788888766553211 110 001
Q ss_pred eEEEeec-ccCCCCCCCCccEEEEccccccccc--------------------------------------cHHHHHHHH
Q 012571 264 AMIGNFI-SRQLPYPSLSFDMVHCAQCGIIWDK--------------------------------------KEGIFLIEA 304 (460)
Q Consensus 264 ~~~~~~d-~~~Lp~~~~sFDlVvs~~~l~~~~~--------------------------------------d~~~~L~ei 304 (460)
+..++.. ...-.||+++||+|+|+. .+||.. |...+|+..
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~-aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~r 211 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAF-SLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRAR 211 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEES-CTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecc-eeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1222221 122347899999999997 577753 334568899
Q ss_pred HHhcCCCcEEEEEeCCCCC
Q 012571 305 DRLLKPGGYFVLTSPESKP 323 (460)
Q Consensus 305 ~RvLkPGG~lvl~~~~~~~ 323 (460)
++.|+|||.++++......
T Consensus 212 a~eL~pGG~mvl~~~gr~~ 230 (374)
T 3b5i_A 212 AAEVKRGGAMFLVCLGRTS 230 (374)
T ss_dssp HHHEEEEEEEEEEEEECCC
T ss_pred HHHhCCCCEEEEEEecCCC
Confidence 9999999999999886543
No 268
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.15 E-value=3.4e-06 Score=81.52 Aligned_cols=84 Identities=12% Similarity=0.016 Sum_probs=61.3
Q ss_pred hHHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCC---CeEEEeec
Q 012571 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGL---PAMIGNFI 270 (460)
Q Consensus 194 ~~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl---~~~~~~~d 270 (460)
....+.+.+.+....+ .+|||||||+|.++. +.. +. ..+++++|+++.|++.++++.. ++.+..+|
T Consensus 7 ~~i~~~iv~~~~~~~~--------~~VLEIG~G~G~lt~-l~~-~~-~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D 75 (252)
T 1qyr_A 7 QFVIDSIVSAINPQKG--------QAMVEIGPGLAALTE-PVG-ER-LDQLTVIELDRDLAARLQTHPFLGPKLTIYQQD 75 (252)
T ss_dssp HHHHHHHHHHHCCCTT--------CCEEEECCTTTTTHH-HHH-TT-CSCEEEECCCHHHHHHHHTCTTTGGGEEEECSC
T ss_pred HHHHHHHHHhcCCCCc--------CEEEEECCCCcHHHH-hhh-CC-CCeEEEEECCHHHHHHHHHHhccCCceEEEECc
Confidence 3466777777766554 789999999999999 653 32 1238999999999999987632 57788888
Q ss_pred ccCCCCCC-----CCccEEEEcc
Q 012571 271 SRQLPYPS-----LSFDMVHCAQ 288 (460)
Q Consensus 271 ~~~Lp~~~-----~sFDlVvs~~ 288 (460)
...+++++ +..|.|+++.
T Consensus 76 ~~~~~~~~~~~~~~~~~~vvsNl 98 (252)
T 1qyr_A 76 AMTFNFGELAEKMGQPLRVFGNL 98 (252)
T ss_dssp GGGCCHHHHHHHHTSCEEEEEEC
T ss_pred hhhCCHHHhhcccCCceEEEECC
Confidence 88877643 2346777763
No 269
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.14 E-value=9.1e-06 Score=83.20 Aligned_cols=106 Identities=17% Similarity=0.149 Sum_probs=71.5
Q ss_pred CCeEEEeCCCCchHHHHHHhc----------------cCceeEEEEeeCC-----------HHHHHHHHHc-C--CCeEE
Q 012571 217 VQSVLDVGCGFGSFGAHLVSL----------------KLMAVCVAVYEAT-----------GSQVQLALER-G--LPAMI 266 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~----------------g~~~~~v~giD~s-----------~~~l~~A~~r-g--l~~~~ 266 (460)
..+|+|+||++|.++..+... .....+|...|.. +.+.+.+++. + .+..+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 468999999999999877665 1245778888887 4444433332 2 22333
Q ss_pred Eeec---ccCCCCCCCCccEEEEccccccccccHH---------------------------------------HHHHHH
Q 012571 267 GNFI---SRQLPYPSLSFDMVHCAQCGIIWDKKEG---------------------------------------IFLIEA 304 (460)
Q Consensus 267 ~~~d---~~~Lp~~~~sFDlVvs~~~l~~~~~d~~---------------------------------------~~L~ei 304 (460)
..+. ...-.||+++||+|+++. .+||..+.. .+|+..
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~-aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~R 211 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCY-CLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIH 211 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEES-CTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecc-eeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3332 223458899999999997 577843221 125666
Q ss_pred HHhcCCCcEEEEEeCCCCC
Q 012571 305 DRLLKPGGYFVLTSPESKP 323 (460)
Q Consensus 305 ~RvLkPGG~lvl~~~~~~~ 323 (460)
++.|+|||.++++......
T Consensus 212 a~eL~pGG~mvl~~~gr~~ 230 (384)
T 2efj_A 212 SEELISRGRMLLTFICKED 230 (384)
T ss_dssp HHHEEEEEEEEEEEECCCT
T ss_pred HHHhccCCeEEEEEecCCC
Confidence 8999999999999886644
No 270
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.13 E-value=2.9e-06 Score=84.22 Aligned_cols=86 Identities=12% Similarity=0.103 Sum_probs=66.1
Q ss_pred hHHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CCCeEEEee
Q 012571 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNF 269 (460)
Q Consensus 194 ~~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl~~~~~~~ 269 (460)
....+.+.+.+....+ .+|||+|||+|.++..++++.. ...++|+|.++.+++.|+++ +..+.+...
T Consensus 12 pvLl~e~l~~L~~~~g--------~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~ 82 (301)
T 1m6y_A 12 PVMVREVIEFLKPEDE--------KIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKV 82 (301)
T ss_dssp CTTHHHHHHHHCCCTT--------CEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEEC
T ss_pred HHHHHHHHHhcCCCCC--------CEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEC
Confidence 3456677777766554 7999999999999999998843 36899999999999999876 346777777
Q ss_pred cccCCC--CC---CCCccEEEEcc
Q 012571 270 ISRQLP--YP---SLSFDMVHCAQ 288 (460)
Q Consensus 270 d~~~Lp--~~---~~sFDlVvs~~ 288 (460)
|...++ +. .++||.|++..
T Consensus 83 d~~~l~~~l~~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 83 SYREADFLLKTLGIEKVDGILMDL 106 (301)
T ss_dssp CGGGHHHHHHHTTCSCEEEEEEEC
T ss_pred CHHHHHHHHHhcCCCCCCEEEEcC
Confidence 776654 11 25799999753
No 271
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.13 E-value=4.7e-06 Score=89.15 Aligned_cols=125 Identities=15% Similarity=0.074 Sum_probs=84.1
Q ss_pred cccccchhHHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhcc---C--------------ceeEEEEeeC
Q 012571 187 GLVFDGVKDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLK---L--------------MAVCVAVYEA 249 (460)
Q Consensus 187 ~~~fd~~~~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g---~--------------~~~~v~giD~ 249 (460)
+.+|.. ....+.+.+.+....+ .+|||.+||+|.++..+++.- . ....++|+|+
T Consensus 149 G~fyTP-~~iv~~mv~~l~p~~~--------~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEi 219 (541)
T 2ar0_A 149 GQYFTP-RPLIKTIIHLLKPQPR--------EVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLEL 219 (541)
T ss_dssp -CCCCC-HHHHHHHHHHHCCCTT--------CCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEES
T ss_pred CeeeCC-HHHHHHHHHHhccCCC--------CeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcC
Confidence 445533 3355666777755443 689999999999998776541 0 1236899999
Q ss_pred CHHHHHHHHHc----CCC------eEEEeecccCCC-CCCCCccEEEEcccccccc------------cc-HHHHHHHHH
Q 012571 250 TGSQVQLALER----GLP------AMIGNFISRQLP-YPSLSFDMVHCAQCGIIWD------------KK-EGIFLIEAD 305 (460)
Q Consensus 250 s~~~l~~A~~r----gl~------~~~~~~d~~~Lp-~~~~sFDlVvs~~~l~~~~------------~d-~~~~L~ei~ 305 (460)
++.+++.|+.+ ++. ..+..+|+...+ ...+.||+|+++-...... .+ ...++..+.
T Consensus 220 d~~~~~lA~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l 299 (541)
T 2ar0_A 220 VPGTRRLALMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHII 299 (541)
T ss_dssp CHHHHHHHHHHHHTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHH
Confidence 99999998764 443 455555554432 3457899999973221110 01 125899999
Q ss_pred HhcCCCcEEEEEeCC
Q 012571 306 RLLKPGGYFVLTSPE 320 (460)
Q Consensus 306 RvLkPGG~lvl~~~~ 320 (460)
+.|||||++.+..|.
T Consensus 300 ~~Lk~gGr~a~V~p~ 314 (541)
T 2ar0_A 300 ETLHPGGRAAVVVPD 314 (541)
T ss_dssp HHEEEEEEEEEEEEH
T ss_pred HHhCCCCEEEEEecC
Confidence 999999999999874
No 272
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.08 E-value=4.1e-06 Score=85.65 Aligned_cols=95 Identities=20% Similarity=0.115 Sum_probs=70.1
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc-------------------CCC-eEEEeecccCCCC-
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER-------------------GLP-AMIGNFISRQLPY- 276 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r-------------------gl~-~~~~~~d~~~Lp~- 276 (460)
.+|||+|||+|.++..++.+.. ...|+++|+++.+++.++++ ++. +.+...|...+..
T Consensus 49 ~~VLDl~aGtG~~~l~~a~~~~-~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~ 127 (378)
T 2dul_A 49 KIVLDALSATGIRGIRFALETP-AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAE 127 (378)
T ss_dssp SEEEESSCTTSHHHHHHHHHSS-CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHH
T ss_pred CEEEECCCchhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHh
Confidence 6899999999999999998722 24699999999999988754 333 5565566544321
Q ss_pred CCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012571 277 PSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTS 318 (460)
Q Consensus 277 ~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~ 318 (460)
..+.||+|++. . . .....++..+.+.|||||.++++.
T Consensus 128 ~~~~fD~I~lD-P---~-~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 128 RHRYFHFIDLD-P---F-GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp STTCEEEEEEC-C---S-SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCCCEEEeC-C---C-CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 13579999954 1 1 123468899999999999988874
No 273
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.06 E-value=1.5e-05 Score=87.73 Aligned_cols=118 Identities=18% Similarity=0.096 Sum_probs=77.6
Q ss_pred HHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccC------------------------------------
Q 012571 196 YSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKL------------------------------------ 239 (460)
Q Consensus 196 ~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~------------------------------------ 239 (460)
....+........+ ..|||.+||+|.++...+..+.
T Consensus 178 LAa~ll~~~~~~~~--------~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~ 249 (703)
T 3v97_A 178 LAAAIVMRSGWQPG--------TPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRAR 249 (703)
T ss_dssp HHHHHHHHTTCCTT--------SCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCC--------CeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhh
Confidence 44444455444433 6899999999999987775420
Q ss_pred -----ceeEEEEeeCCHHHHHHHHHc----CCC--eEEEeecccCC--CCCCCCccEEEEccc-ccccc--ccHHHHH--
Q 012571 240 -----MAVCVAVYEATGSQVQLALER----GLP--AMIGNFISRQL--PYPSLSFDMVHCAQC-GIIWD--KKEGIFL-- 301 (460)
Q Consensus 240 -----~~~~v~giD~s~~~l~~A~~r----gl~--~~~~~~d~~~L--p~~~~sFDlVvs~~~-l~~~~--~d~~~~L-- 301 (460)
....++|+|+++.+++.|+++ |+. +.+...|..++ |..+++||+|+++=- ...+. .+...++
T Consensus 250 ~~~~~~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~ 329 (703)
T 3v97_A 250 KGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSL 329 (703)
T ss_dssp HHHHHCCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHH
T ss_pred hccccCCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHH
Confidence 114799999999999998765 554 57777777776 343458999999821 11111 1223344
Q ss_pred -HHHHHhcCCCcEEEEEeCCC
Q 012571 302 -IEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 302 -~ei~RvLkPGG~lvl~~~~~ 321 (460)
.++.+.+.|||.+++..+..
T Consensus 330 l~~~lk~~~~g~~~~ilt~~~ 350 (703)
T 3v97_A 330 LGRIMKNQFGGWNLSLFSASP 350 (703)
T ss_dssp HHHHHHHHCTTCEEEEEESCH
T ss_pred HHHHHHhhCCCCeEEEEeCCH
Confidence 44455556899999987643
No 274
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.00 E-value=8.1e-06 Score=79.11 Aligned_cols=68 Identities=21% Similarity=0.158 Sum_probs=53.4
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCH-------HHHHHHHHc----CC--CeEEEeecccCC-C-CCC--CC
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATG-------SQVQLALER----GL--PAMIGNFISRQL-P-YPS--LS 280 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~-------~~l~~A~~r----gl--~~~~~~~d~~~L-p-~~~--~s 280 (460)
.+|||+|||+|.++..++..+ ..|+++|+++ .+++.|+++ ++ .+.+..+|..++ + +++ ++
T Consensus 85 ~~VLDlgcG~G~~a~~lA~~g---~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~~ 161 (258)
T 2r6z_A 85 PTVWDATAGLGRDSFVLASLG---LTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQGK 161 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHTT---CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHCC
T ss_pred CeEEEeeCccCHHHHHHHHhC---CEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCCC
Confidence 689999999999999999875 5799999999 888888654 22 366777766553 2 334 78
Q ss_pred ccEEEEcc
Q 012571 281 FDMVHCAQ 288 (460)
Q Consensus 281 FDlVvs~~ 288 (460)
||+|++.-
T Consensus 162 fD~V~~dP 169 (258)
T 2r6z_A 162 PDIVYLDP 169 (258)
T ss_dssp CSEEEECC
T ss_pred ccEEEECC
Confidence 99999964
No 275
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.96 E-value=6.3e-05 Score=80.40 Aligned_cols=130 Identities=20% Similarity=0.218 Sum_probs=86.2
Q ss_pred cccccchhHHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhcc--CceeEEEEeeCCHHHHHHHHHc----
Q 012571 187 GLVFDGVKDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLK--LMAVCVAVYEATGSQVQLALER---- 260 (460)
Q Consensus 187 ~~~fd~~~~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g--~~~~~v~giD~s~~~l~~A~~r---- 260 (460)
+.+|.. ....+.+.+.+..... .....+|||.+||+|.+...+++.- .....++|+|+++.+.+.|+.+
T Consensus 197 G~fyTP-~~Vv~lmv~ll~~~~~----~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~ 271 (542)
T 3lkd_A 197 GEFYTP-QPVAKLMTQIAFLGRE----DKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILH 271 (542)
T ss_dssp SSCCCC-HHHHHHHHHHHHTTCT----TCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHT
T ss_pred Ceeccc-HHHHHHHHHHHhcccC----CCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHc
Confidence 444433 3456666666653210 0123699999999999988877651 1236899999999999988754
Q ss_pred CC---CeEEEeecccCC--C-CCCCCccEEEEcccc-cccc--------------------cc-HHHHHHHHHHhcC-CC
Q 012571 261 GL---PAMIGNFISRQL--P-YPSLSFDMVHCAQCG-IIWD--------------------KK-EGIFLIEADRLLK-PG 311 (460)
Q Consensus 261 gl---~~~~~~~d~~~L--p-~~~~sFDlVvs~~~l-~~~~--------------------~d-~~~~L~ei~RvLk-PG 311 (460)
|+ .+.+..+|+... | +....||+|+++=-. ..|. .+ .-.++..+.+.|| ||
T Consensus 272 gi~~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~g 351 (542)
T 3lkd_A 272 GVPIENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDN 351 (542)
T ss_dssp TCCGGGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTT
T ss_pred CCCcCccceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCc
Confidence 55 345666666554 3 456789999987110 1110 00 1137899999999 99
Q ss_pred cEEEEEeCCC
Q 012571 312 GYFVLTSPES 321 (460)
Q Consensus 312 G~lvl~~~~~ 321 (460)
|++.+..|..
T Consensus 352 Gr~a~VlP~g 361 (542)
T 3lkd_A 352 GVMAIVLPHG 361 (542)
T ss_dssp CEEEEEEETH
T ss_pred eeEEEEecch
Confidence 9999998753
No 276
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.94 E-value=3.9e-05 Score=82.05 Aligned_cols=117 Identities=21% Similarity=0.120 Sum_probs=79.0
Q ss_pred HHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhcc----C----------ceeEEEEeeCCHHHHHHHHHc
Q 012571 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLK----L----------MAVCVAVYEATGSQVQLALER 260 (460)
Q Consensus 195 ~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g----~----------~~~~v~giD~s~~~l~~A~~r 260 (460)
...+.+.+.+.... .+|||.+||+|.+...+++.- . ....+.|+|+++.+++.|+.+
T Consensus 232 ~Vv~lmv~ll~p~~---------~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~N 302 (544)
T 3khk_A 232 SIVTLIVEMLEPYK---------GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMN 302 (544)
T ss_dssp HHHHHHHHHHCCCS---------EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCC---------CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHH
Confidence 45556666654321 489999999999987765420 0 136899999999999998754
Q ss_pred ----CCCeEE--EeecccCCC-CCCCCccEEEEcc--ccccccc-------------------------cH-HHHHHHHH
Q 012571 261 ----GLPAMI--GNFISRQLP-YPSLSFDMVHCAQ--CGIIWDK-------------------------KE-GIFLIEAD 305 (460)
Q Consensus 261 ----gl~~~~--~~~d~~~Lp-~~~~sFDlVvs~~--~l~~~~~-------------------------d~-~~~L~ei~ 305 (460)
++...+ ..+|+...+ +.+..||+|+++= ....|.. +. -.++..+.
T Consensus 303 l~l~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l 382 (544)
T 3khk_A 303 MVIRGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHML 382 (544)
T ss_dssp HHHTTCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHH
T ss_pred HHHhCCCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHH
Confidence 554433 445544433 4567899999962 1111110 01 15789999
Q ss_pred HhcCCCcEEEEEeCC
Q 012571 306 RLLKPGGYFVLTSPE 320 (460)
Q Consensus 306 RvLkPGG~lvl~~~~ 320 (460)
+.|||||++.+..|.
T Consensus 383 ~~Lk~gGr~aiVlP~ 397 (544)
T 3khk_A 383 YHLAPTGSMALLLAN 397 (544)
T ss_dssp HTEEEEEEEEEEEET
T ss_pred HHhccCceEEEEecc
Confidence 999999999999874
No 277
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.92 E-value=6.2e-05 Score=74.29 Aligned_cols=102 Identities=19% Similarity=0.159 Sum_probs=74.8
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----------CCCeEEEeecccC-CCCCCCCccEEE
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----------GLPAMIGNFISRQ-LPYPSLSFDMVH 285 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----------gl~~~~~~~d~~~-Lp~~~~sFDlVv 285 (460)
+++||=||.|.|..++.+++.. ...+++.+|++++.++.+++. ..++.+...|... +.-..++||+|+
T Consensus 84 pk~VLIiGgGdG~~~revlk~~-~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi 162 (294)
T 3o4f_A 84 AKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp CCEEEEESCTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEE
T ss_pred CCeEEEECCCchHHHHHHHHcC-CcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEE
Confidence 4899999999999999999873 336899999999999998764 2345555555443 334567899999
Q ss_pred Eccccccccc----cHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 286 CAQCGIIWDK----KEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 286 s~~~l~~~~~----d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
.-. .-.... ....+++.+++.|+|||.++.....
T Consensus 163 ~D~-~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~s 200 (294)
T 3o4f_A 163 SDC-TDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp ESC-CCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EeC-CCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCC
Confidence 752 222211 1135899999999999999987543
No 278
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.91 E-value=1.1e-05 Score=82.00 Aligned_cols=106 Identities=17% Similarity=0.273 Sum_probs=74.2
Q ss_pred CCeEEEeCCCCchHHHHHHhc---------------cCceeEEEEeeCCHHHHHHHHHcCC------CeEEEeec---cc
Q 012571 217 VQSVLDVGCGFGSFGAHLVSL---------------KLMAVCVAVYEATGSQVQLALERGL------PAMIGNFI---SR 272 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~---------------g~~~~~v~giD~s~~~l~~A~~rgl------~~~~~~~d---~~ 272 (460)
.-+|+|+||++|.++..+.+. ..+..+|...|...+.....-+.-. +..+..+. ..
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 367999999999887666554 2456888899988877665533310 12333222 23
Q ss_pred CCCCCCCCccEEEEcccccccccc---------------------------------HHHHHHHHHHhcCCCcEEEEEeC
Q 012571 273 QLPYPSLSFDMVHCAQCGIIWDKK---------------------------------EGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 273 ~Lp~~~~sFDlVvs~~~l~~~~~d---------------------------------~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
.-.||++++|+|+|+. .+||..+ ...+|+..++.|+|||.++++..
T Consensus 132 ~rlfp~~S~d~v~Ss~-aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~ 210 (359)
T 1m6e_X 132 GRLFPRNTLHFIHSSY-SLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTIL 210 (359)
T ss_dssp SCCSCTTCBSCEEEES-CTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEE
T ss_pred hccCCCCceEEEEehh-hhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEe
Confidence 3468999999999997 5778432 12358888999999999999987
Q ss_pred CCCC
Q 012571 320 ESKP 323 (460)
Q Consensus 320 ~~~~ 323 (460)
....
T Consensus 211 gr~~ 214 (359)
T 1m6e_X 211 GRRS 214 (359)
T ss_dssp ECSS
T ss_pred cCCC
Confidence 6544
No 279
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.85 E-value=9.5e-06 Score=79.19 Aligned_cols=101 Identities=18% Similarity=0.137 Sum_probs=64.0
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHH---cCCCeEEEeecccCCCCCCCCccEEEEcccccc--
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALE---RGLPAMIGNFISRQLPYPSLSFDMVHCAQCGII-- 292 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~---rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~-- 292 (460)
.+|||+|||+|.|+...+++. ...++.|+|++..+...+.. .+..+.....++....++.+.+|+|+|-.+ .+
T Consensus 92 ~~VLDLGaAPGGWsQvAa~~~-gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DvVLSDmA-pnsG 169 (282)
T 3gcz_A 92 GIVVDLGCGRGGWSYYAASLK-NVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFNMEVIPGDTLLCDIG-ESSP 169 (282)
T ss_dssp EEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGGSCCCCCSEEEECCC-CCCS
T ss_pred CEEEEeCCCCCHHHHHHHHhc-CCCeeeeEEeccCccccccccccCCCceEEeeCCcchhhcCCCCcCEEEecCc-cCCC
Confidence 689999999999999988653 23578899998654222211 011222221111222345788999999643 33
Q ss_pred --ccccHH--HHHHHHHHhcCCC--cEEEEEeCC
Q 012571 293 --WDKKEG--IFLIEADRLLKPG--GYFVLTSPE 320 (460)
Q Consensus 293 --~~~d~~--~~L~ei~RvLkPG--G~lvl~~~~ 320 (460)
..+... .+|.-+.++|||| |.|++-...
T Consensus 170 ~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 170 SIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred ChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 212222 2566678899999 999998774
No 280
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.82 E-value=2.5e-05 Score=85.12 Aligned_cols=98 Identities=17% Similarity=0.106 Sum_probs=66.0
Q ss_pred CeEEEeCCCCchHHHHHHhc----c--------CceeEEEEeeCCHHHHHHHHHc---C--CCeEEEeecccCCCCC---
Q 012571 218 QSVLDVGCGFGSFGAHLVSL----K--------LMAVCVAVYEATGSQVQLALER---G--LPAMIGNFISRQLPYP--- 277 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~----g--------~~~~~v~giD~s~~~l~~A~~r---g--l~~~~~~~d~~~Lp~~--- 277 (460)
..|||||||+|.+....+.. + .....|+++|.++......+.+ + -.+.+...+.+++..+
T Consensus 411 ~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~~ 490 (745)
T 3ua3_A 411 VVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAKD 490 (745)
T ss_dssp EEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHHH
T ss_pred cEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhccccccc
Confidence 58999999999996432221 1 1236899999998655433322 3 3577777888877653
Q ss_pred --CCCccEEEEcccccccc-ccHHHHHHHHHHhcCCCcEEE
Q 012571 278 --SLSFDMVHCAQCGIIWD-KKEGIFLIEADRLLKPGGYFV 315 (460)
Q Consensus 278 --~~sFDlVvs~~~l~~~~-~d~~~~L~ei~RvLkPGG~lv 315 (460)
.+..|+|++-....... +-....|..+.|.|||||.++
T Consensus 491 ~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 491 RGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp TTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred CCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 57899999964222111 222357888899999999865
No 281
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.76 E-value=0.00023 Score=66.47 Aligned_cols=91 Identities=11% Similarity=-0.026 Sum_probs=62.9
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----CC----CeEEEeecccC---------------C
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL----PAMIGNFISRQ---------------L 274 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----gl----~~~~~~~d~~~---------------L 274 (460)
++|||+||| ..+..+++. . ..+|+.+|.+++..+.|++. ++ ++.+..++... +
T Consensus 32 ~~VLEiGtG--ySTl~lA~~-~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 32 EVILEYGSG--GSTVVAAEL-P-GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp SEEEEESCS--HHHHHHHTS-T-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CEEEEECch--HHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 789999985 566666664 2 36899999999999988754 54 35555555322 2
Q ss_pred C--------C-CCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012571 275 P--------Y-PSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTS 318 (460)
Q Consensus 275 p--------~-~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~ 318 (460)
+ . ..++||+|+.-. +.....+..+.+.|+|||.+++-.
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg------~k~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDG------RFRVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECS------SSHHHHHHHHHHHCSSCEEEEETT
T ss_pred HHHhhhhhccccCCCCCEEEEeC------CCchhHHHHHHHhcCCCeEEEEeC
Confidence 2 1 237899999863 222356667789999999995544
No 282
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.69 E-value=2.5e-05 Score=80.66 Aligned_cols=67 Identities=16% Similarity=0.028 Sum_probs=53.8
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc------CC-CeEEEeecccCC-CC-CCCCccEEEEc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER------GL-PAMIGNFISRQL-PY-PSLSFDMVHCA 287 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r------gl-~~~~~~~d~~~L-p~-~~~sFDlVvs~ 287 (460)
.+|||+|||+|..+..+++.+ .+|+++|+++.+++.|+++ ++ ++.+..+|..+. +. ++++||+|++.
T Consensus 95 ~~VLDLgcG~G~~al~LA~~g---~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 95 TKVVDLTGGLGIDFIALMSKA---SQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp CEEEESSCSSSHHHHHHHTTC---SEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CEEEEeCCCchHHHHHHHhcC---CEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 789999999999999998875 5899999999999998765 44 466777776653 32 24689999984
No 283
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.67 E-value=4.6e-05 Score=73.79 Aligned_cols=119 Identities=12% Similarity=0.033 Sum_probs=72.1
Q ss_pred CCeEEEeCCCCchHHHHHHhc-------cCc----eeEEEEeeCCH---HHHHH-----------HHHc--C--------
Q 012571 217 VQSVLDVGCGFGSFGAHLVSL-------KLM----AVCVAVYEATG---SQVQL-----------ALER--G-------- 261 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~-------g~~----~~~v~giD~s~---~~l~~-----------A~~r--g-------- 261 (460)
..+|||||+|+|..+..+++. ++. ...++++|..+ ++++. |++. .
T Consensus 61 ~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g~ 140 (257)
T 2qy6_A 61 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 140 (257)
T ss_dssp EEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSEE
T ss_pred CCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccch
Confidence 468999999999988776553 331 36899999765 44442 2221 0
Q ss_pred ---------CCeEEEeecccC-CCCCC----CCccEEEEccccccc-ccc--HHHHHHHHHHhcCCCcEEEEEeCCCCCC
Q 012571 262 ---------LPAMIGNFISRQ-LPYPS----LSFDMVHCAQCGIIW-DKK--EGIFLIEADRLLKPGGYFVLTSPESKPR 324 (460)
Q Consensus 262 ---------l~~~~~~~d~~~-Lp~~~----~sFDlVvs~~~l~~~-~~d--~~~~L~ei~RvLkPGG~lvl~~~~~~~~ 324 (460)
..+.+..+|+.+ ++..+ ..||+|+.-- ...- .++ ...+|.++.++|||||.|+.....
T Consensus 141 ~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~-fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tysaa---- 215 (257)
T 2qy6_A 141 HRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDG-FAPAKNPDMWTQNLFNAMARLARPGGTLATFTSA---- 215 (257)
T ss_dssp EEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECS-SCTTTCGGGCCHHHHHHHHHHEEEEEEEEESCCB----
T ss_pred hheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECC-CCcccChhhcCHHHHHHHHHHcCCCcEEEEEeCC----
Confidence 123344455443 33222 2799999842 1111 112 246999999999999998853321
Q ss_pred CCCCchhhhHHHHHHHHHHHHhCeEEEe
Q 012571 325 GSSSSRKNKSLLKVMEEFTEKICWSLIA 352 (460)
Q Consensus 325 ~~~~~~e~~~~w~~i~~l~~~~~w~~~~ 352 (460)
..+.......+|++..
T Consensus 216 ------------~~vrr~L~~aGF~v~~ 231 (257)
T 2qy6_A 216 ------------GFVRRGLQEAGFTMQK 231 (257)
T ss_dssp ------------HHHHHHHHHHTEEEEE
T ss_pred ------------HHHHHHHHHCCCEEEe
Confidence 1344455567888653
No 284
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.61 E-value=0.00052 Score=69.66 Aligned_cols=92 Identities=12% Similarity=0.012 Sum_probs=62.4
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEcccccccccc
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKK 296 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~d 296 (460)
..+|||+||++|.|+..+++++ ..|+++|..+ |-.... ....+.+...|...+..+.+.||+|+|-.. .+
T Consensus 212 G~~vlDLGAaPGGWT~~l~~rg---~~V~aVD~~~-l~~~l~-~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~-----~~ 281 (375)
T 4auk_A 212 GMWAVDLGACPGGWTYQLVKRN---MWVYSVDNGP-MAQSLM-DTGQVTWLREDGFKFRPTRSNISWMVCDMV-----EK 281 (375)
T ss_dssp TCEEEEETCTTCHHHHHHHHTT---CEEEEECSSC-CCHHHH-TTTCEEEECSCTTTCCCCSSCEEEEEECCS-----SC
T ss_pred CCEEEEeCcCCCHHHHHHHHCC---CEEEEEEhhh-cChhhc-cCCCeEEEeCccccccCCCCCcCEEEEcCC-----CC
Confidence 3899999999999999999997 5899999864 222221 233567777777777766788999999643 23
Q ss_pred HHHHHHHHHHhcCCC---cEEEEEe
Q 012571 297 EGIFLIEADRLLKPG---GYFVLTS 318 (460)
Q Consensus 297 ~~~~L~ei~RvLkPG---G~lvl~~ 318 (460)
+...+.-+.+.|..| +.++...
T Consensus 282 p~~~~~l~~~wl~~~~~~~aI~~lK 306 (375)
T 4auk_A 282 PAKVAALMAQWLVNGWCRETIFNLK 306 (375)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEEE
T ss_pred hHHhHHHHHHHHhccccceEEEEEE
Confidence 444555555555444 5544443
No 285
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.57 E-value=0.00027 Score=78.18 Aligned_cols=103 Identities=17% Similarity=0.087 Sum_probs=69.4
Q ss_pred CeEEEeCCCCchHHHHHHhccC--ceeEEEEeeCCHHHHHHHHHc----------CCCe-EEEeecccCC-CCCCCCccE
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKL--MAVCVAVYEATGSQVQLALER----------GLPA-MIGNFISRQL-PYPSLSFDM 283 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~--~~~~v~giD~s~~~l~~A~~r----------gl~~-~~~~~d~~~L-p~~~~sFDl 283 (460)
.+|||.|||+|.++..++++.. ....++|+|+++.+++.|+.+ +... .+...+.... +...+.||+
T Consensus 323 ~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kFDV 402 (878)
T 3s1s_A 323 EVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANVSV 402 (878)
T ss_dssp CEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTEEE
T ss_pred CEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCCCE
Confidence 6899999999999999887632 235789999999999988321 2221 2332233332 234578999
Q ss_pred EEEcccccc-cc--c------------------------c-HHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 284 VHCAQCGII-WD--K------------------------K-EGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 284 Vvs~~~l~~-~~--~------------------------d-~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
|+++=-... .. . + ...++..+.+.|+|||++.+..|.
T Consensus 403 VIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 403 VVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp EEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEET
T ss_pred EEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEECh
Confidence 999732211 10 0 0 123678899999999999999985
No 286
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.56 E-value=5.8e-05 Score=73.18 Aligned_cols=90 Identities=17% Similarity=0.089 Sum_probs=58.5
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc-----------C-C--CeEEEeecccC-CCCCCCCcc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER-----------G-L--PAMIGNFISRQ-LPYPSLSFD 282 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r-----------g-l--~~~~~~~d~~~-Lp~~~~sFD 282 (460)
.+|||+|||+|..+..++.++ .+|+++|.++.+.+.+++. + + ++.+...|..+ ++...++||
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g---~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fD 166 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVG---CRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQ 166 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHT---CCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCS
T ss_pred CEEEEcCCcCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCC
Confidence 689999999999999999986 4699999999764433221 1 1 35666666554 332234799
Q ss_pred EEEEccccccccccHHHHHHHHHHhcCCCc
Q 012571 283 MVHCAQCGIIWDKKEGIFLIEADRLLKPGG 312 (460)
Q Consensus 283 lVvs~~~l~~~~~d~~~~L~ei~RvLkPGG 312 (460)
+|++.- .++.. ....++++..++|++.+
T Consensus 167 vV~lDP-~y~~~-~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 167 VVYLDP-MFPHK-QKSALVKKEMRVFQSLV 194 (258)
T ss_dssp EEEECC-CCCCC-CC-----HHHHHHHHHS
T ss_pred EEEEcC-CCCCc-ccchHHHHHHHHHHHhh
Confidence 999874 33332 22356777788888766
No 287
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.46 E-value=0.00032 Score=68.88 Aligned_cols=102 Identities=19% Similarity=0.191 Sum_probs=62.9
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHH---cCCCeEEEeecccCCCCCCCCccEEEEccccccc
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALE---RGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIW 293 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~---rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~ 293 (460)
..+|||+||++|.|+..++++. ....+.|+|+...+...... .+.++.....+..-..+..+.+|+|+|-. ..+-
T Consensus 82 g~~vlDLGaaPGgWsqva~~~~-gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~di~~l~~~~~DlVlsD~-APns 159 (300)
T 3eld_A 82 TGRVLDLGCGRGGWSYYAAAQK-EVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPSDTLLCDI-GESS 159 (300)
T ss_dssp CEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECC-CCCC
T ss_pred CCEEEEcCCCCCHHHHHHHHhc-CCceeeeEEeccccccccccccccCCceEEeecCceeeecCCCCcCEEeecC-cCCC
Confidence 3799999999999999999863 23578899987542111000 01111211111222234567899999964 3331
Q ss_pred ----cccH--HHHHHHHHHhcCCC-cEEEEEeCC
Q 012571 294 ----DKKE--GIFLIEADRLLKPG-GYFVLTSPE 320 (460)
Q Consensus 294 ----~~d~--~~~L~ei~RvLkPG-G~lvl~~~~ 320 (460)
.+.. ..+|.-+.++|+|| |.|++-...
T Consensus 160 G~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 160 SNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp SSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 1111 13566678899999 999998764
No 288
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.36 E-value=0.00046 Score=70.29 Aligned_cols=101 Identities=17% Similarity=0.067 Sum_probs=69.2
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCC-------------CeEEEeecccCC----CCCCC
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGL-------------PAMIGNFISRQL----PYPSL 279 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl-------------~~~~~~~d~~~L----p~~~~ 279 (460)
+++||=||.|.|..++.+++... .+++.+|++++.++.+++.-. ++.+...|.... .-..+
T Consensus 206 pkrVLIIGgGdG~~~revlkh~~--~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 206 GKDVLILGGGDGGILCEIVKLKP--KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp TCEEEEEECTTCHHHHHHHTTCC--SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCeEEEECCCcHHHHHHHHhcCC--ceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 47999999999999999998753 578999999999999987411 133433333211 11246
Q ss_pred CccEEEEcccccccccc---------HHHHHHHHHHhcCCCcEEEEEeC
Q 012571 280 SFDMVHCAQCGIIWDKK---------EGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 280 sFDlVvs~~~l~~~~~d---------~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
.||+|+.-..-.....+ ...+++.+++.|+|||.++....
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~ 332 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 332 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecC
Confidence 79999975211111111 13578889999999999988643
No 289
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.17 E-value=0.00048 Score=61.01 Aligned_cols=82 Identities=13% Similarity=0.073 Sum_probs=56.0
Q ss_pred CeEEEeCCCCc-hHHHHHHh-ccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCC--CCccEEEEccccccc
Q 012571 218 QSVLDVGCGFG-SFGAHLVS-LKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPS--LSFDMVHCAQCGIIW 293 (460)
Q Consensus 218 ~~VLDIGCGtG-~~a~~La~-~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~--~sFDlVvs~~~l~~~ 293 (460)
.+|||||||.| ..+..|++ .| ..|+++|+++..++ +...|..+ |..+ ..||+|.+.+.
T Consensus 37 ~rVlEVG~G~g~~vA~~La~~~g---~~V~atDInp~Av~----------~v~dDiF~-P~~~~Y~~~DLIYsirP---- 98 (153)
T 2k4m_A 37 TRVVEVGAGRFLYVSDYIRKHSK---VDLVLTDIKPSHGG----------IVRDDITS-PRMEIYRGAALIYSIRP---- 98 (153)
T ss_dssp SEEEEETCTTCCHHHHHHHHHSC---CEEEEECSSCSSTT----------EECCCSSS-CCHHHHTTEEEEEEESC----
T ss_pred CcEEEEccCCChHHHHHHHHhCC---CeEEEEECCccccc----------eEEccCCC-CcccccCCcCEEEEcCC----
Confidence 69999999999 69999997 66 57999999986555 33334433 3222 37999998753
Q ss_pred cccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 294 DKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 294 ~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
+.+....+.++.+.. |.-+++...
T Consensus 99 P~El~~~i~~lA~~v--~adliI~pL 122 (153)
T 2k4m_A 99 PAEIHSSLMRVADAV--GARLIIKPL 122 (153)
T ss_dssp CTTTHHHHHHHHHHH--TCEEEEECB
T ss_pred CHHHHHHHHHHHHHc--CCCEEEEcC
Confidence 245555666666654 456666544
No 290
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.14 E-value=0.0029 Score=64.08 Aligned_cols=115 Identities=17% Similarity=0.084 Sum_probs=78.6
Q ss_pred HHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc----C-------CCeEEEe
Q 012571 200 IAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----G-------LPAMIGN 268 (460)
Q Consensus 200 i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r----g-------l~~~~~~ 268 (460)
....+...++ .+|||+.+|.|.=+.+|++.+. ...+++.|+++.-++..+++ + ..+.+..
T Consensus 140 ~~~~L~~~pg--------~~VLD~CAaPGGKT~~la~~~~-~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~ 210 (359)
T 4fzv_A 140 PVLALGLQPG--------DIVLDLCAAPGGKTLALLQTGC-CRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTS 210 (359)
T ss_dssp HHHHHCCCTT--------EEEEESSCTTCHHHHHHHHTTC-EEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEEC
T ss_pred HHHHhCCCCC--------CEEEEecCCccHHHHHHHHhcC-CCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEe
Confidence 3445666655 7999999999999999988753 35789999999877655432 2 2456666
Q ss_pred ecccCCC-CCCCCccEEEE----cc---cccc--------ccc-c------H-HHHHHHHHHhcCCCcEEEEEeCCCCC
Q 012571 269 FISRQLP-YPSLSFDMVHC----AQ---CGII--------WDK-K------E-GIFLIEADRLLKPGGYFVLTSPESKP 323 (460)
Q Consensus 269 ~d~~~Lp-~~~~sFDlVvs----~~---~l~~--------~~~-d------~-~~~L~ei~RvLkPGG~lvl~~~~~~~ 323 (460)
.|...++ ...+.||.|++ +. .... +.. + . .++|....+.|||||+++.++-....
T Consensus 211 ~D~~~~~~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~ 289 (359)
T 4fzv_A 211 WDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSH 289 (359)
T ss_dssp CCGGGHHHHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCT
T ss_pred CchhhcchhccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCch
Confidence 6665543 34578999996 21 1111 110 0 1 24788899999999999999876544
No 291
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.92 E-value=0.0077 Score=59.06 Aligned_cols=99 Identities=19% Similarity=0.176 Sum_probs=62.3
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHH---HHHHcCCC-eEEEee-cccCCCCCCCCccEEEEcccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQ---LALERGLP-AMIGNF-ISRQLPYPSLSFDMVHCAQCGII 292 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~---~A~~rgl~-~~~~~~-d~~~Lp~~~~sFDlVvs~~~l~~ 292 (460)
.+|||+||++|.|+.+.+.+.. ...|.|+|+...-.+ ..++.+-+ +.+... |...++- ..+|+|+|--. ..
T Consensus 96 ~~VlDLGaapGGwsq~~~~~~g-v~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~--~~~D~ivcDig-eS 171 (321)
T 3lkz_A 96 GKVIDLGCGRGGWCYYMATQKR-VQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPS--ECCDTLLCDIG-ES 171 (321)
T ss_dssp EEEEEETCTTCHHHHHHTTCTT-EEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCC--CCCSEEEECCC-CC
T ss_pred CEEEEeCCCCCcHHHHHHhhcC-CCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCC--CCCCEEEEECc-cC
Confidence 6999999999999998887732 358999998765110 00000101 444443 5555543 66999999643 22
Q ss_pred ccccH----H---HHHHHHHHhcCCC-cEEEEEeCCC
Q 012571 293 WDKKE----G---IFLIEADRLLKPG-GYFVLTSPES 321 (460)
Q Consensus 293 ~~~d~----~---~~L~ei~RvLkPG-G~lvl~~~~~ 321 (460)
- +.+ . .+|.-+.+.|++| |-|++-....
T Consensus 172 s-~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 172 S-SSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp C-SCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred C-CChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCC
Confidence 2 221 1 2566667889999 8888876644
No 292
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=96.77 E-value=0.0039 Score=61.00 Aligned_cols=83 Identities=10% Similarity=-0.035 Sum_probs=62.1
Q ss_pred hHHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcC-CCeEEEeeccc
Q 012571 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG-LPAMIGNFISR 272 (460)
Q Consensus 194 ~~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rg-l~~~~~~~d~~ 272 (460)
.-+.+.+.+.+...++ ..+||.+||.|..+..+++++ ..|+|+|.++.+++.|++.. .++.+...+..
T Consensus 8 pVLl~e~le~L~~~~g--------g~~VD~T~G~GGHS~~il~~~---g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~ 76 (285)
T 1wg8_A 8 PVLYQEALDLLAVRPG--------GVYVDATLGGAGHARGILERG---GRVIGLDQDPEAVARAKGLHLPGLTVVQGNFR 76 (285)
T ss_dssp CTTHHHHHHHHTCCTT--------CEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHTCCTTEEEEESCGG
T ss_pred hHHHHHHHHhhCCCCC--------CEEEEeCCCCcHHHHHHHHCC---CEEEEEeCCHHHHHHHHhhccCCEEEEECCcc
Confidence 3456777777776655 789999999999999999983 58999999999999997711 24566666555
Q ss_pred CCC-----CCCCCccEEEEc
Q 012571 273 QLP-----YPSLSFDMVHCA 287 (460)
Q Consensus 273 ~Lp-----~~~~sFDlVvs~ 287 (460)
.++ ...++||.|++.
T Consensus 77 ~l~~~L~~~g~~~vDgIL~D 96 (285)
T 1wg8_A 77 HLKRHLAALGVERVDGILAD 96 (285)
T ss_dssp GHHHHHHHTTCSCEEEEEEE
T ss_pred hHHHHHHHcCCCCcCEEEeC
Confidence 443 223579999874
No 293
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=96.75 E-value=0.0022 Score=61.85 Aligned_cols=112 Identities=15% Similarity=0.090 Sum_probs=62.4
Q ss_pred HHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhc-cCc--eeEEEEeeCCHHHHHHHHH-cCCCeE-EEee-
Q 012571 196 YSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSL-KLM--AVCVAVYEATGSQVQLALE-RGLPAM-IGNF- 269 (460)
Q Consensus 196 ~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~-g~~--~~~v~giD~s~~~l~~A~~-rgl~~~-~~~~- 269 (460)
-..+|.+..-.+++ .+|||+||+.|.|+.+.+++ ++. ...++++|.+ ....... .|..+. +.++
T Consensus 61 KL~EIdeK~likpg--------~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~--~~P~~~~~~Gv~~i~~~~G~ 130 (269)
T 2px2_A 61 KLRWLVERRFVQPI--------GKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGH--EEPMLMQSYGWNIVTMKSGV 130 (269)
T ss_dssp HHHHHHHTTSCCCC--------EEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTS--CCCCCCCSTTGGGEEEECSC
T ss_pred HHHHHHHcCCCCCC--------CEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccc--cCCCcccCCCceEEEeeccC
Confidence 34555555433333 89999999999999999886 110 1233444521 0000000 122222 3323
Q ss_pred cccCCCCCCCCccEEEEccccccc----cccHH--HHHHHHHHhcCCCc-EEEEEeCC
Q 012571 270 ISRQLPYPSLSFDMVHCAQCGIIW----DKKEG--IFLIEADRLLKPGG-YFVLTSPE 320 (460)
Q Consensus 270 d~~~Lp~~~~sFDlVvs~~~l~~~----~~d~~--~~L~ei~RvLkPGG-~lvl~~~~ 320 (460)
|...++ ...+|+|+|-.. -.- .+... .+|.-+.++|+||| .|++-...
T Consensus 131 Df~~~~--~~~~DvVLSDMA-PnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 131 DVFYKP--SEISDTLLCDIG-ESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp CGGGSC--CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CccCCC--CCCCCEEEeCCC-CCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 555533 567999999542 221 11111 24656668999999 88887764
No 294
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=96.72 E-value=0.012 Score=57.52 Aligned_cols=133 Identities=13% Similarity=0.115 Sum_probs=79.5
Q ss_pred CeEEEeCCCCchHHHHHHhc----cCceeEEEEeeCCHH--------------------------HHHHHHHc----CC-
Q 012571 218 QSVLDVGCGFGSFGAHLVSL----KLMAVCVAVYEATGS--------------------------QVQLALER----GL- 262 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~----g~~~~~v~giD~s~~--------------------------~l~~A~~r----gl- 262 (460)
..|||+|+..|..+..++.. +....+++++|..+. .++.+++. |+
T Consensus 108 g~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl~ 187 (282)
T 2wk1_A 108 GDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDLL 187 (282)
T ss_dssp CEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTCC
T ss_pred CcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCCC
Confidence 78999999999988877653 112357888885321 12333332 43
Q ss_pred --CeEEEeeccc-CCC-CCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHH
Q 012571 263 --PAMIGNFISR-QLP-YPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKV 338 (460)
Q Consensus 263 --~~~~~~~d~~-~Lp-~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~ 338 (460)
.+.+..++.. .++ +++++||+|+.-.- .. ......|..+...|+|||++++-+... + ...-++
T Consensus 188 ~~~I~li~Gda~etL~~~~~~~~d~vfIDaD--~y-~~~~~~Le~~~p~L~pGGiIv~DD~~~-~---------~G~~~A 254 (282)
T 2wk1_A 188 DEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD--LY-ESTWDTLTNLYPKVSVGGYVIVDDYMM-C---------PPCKDA 254 (282)
T ss_dssp STTEEEEESCHHHHSTTCCCCCEEEEEECCC--SH-HHHHHHHHHHGGGEEEEEEEEESSCTT-C---------HHHHHH
T ss_pred cCceEEEEeCHHHHHhhCCCCCEEEEEEcCC--cc-ccHHHHHHHHHhhcCCCEEEEEcCCCC-C---------HHHHHH
Confidence 4666666543 344 34578999998531 12 223357999999999999988877521 1 122344
Q ss_pred HHHHHHHhCeEEEee--ecceeeeeec
Q 012571 339 MEEFTEKICWSLIAQ--QDETFIWQKT 363 (460)
Q Consensus 339 i~~l~~~~~w~~~~~--~~~~~iw~k~ 363 (460)
+.++.++.+++.... +...+.|+|.
T Consensus 255 v~Ef~~~~~i~~~i~~~~~~~v~~rk~ 281 (282)
T 2wk1_A 255 VDEYRAKFDIADELITIDRDGVYWQRT 281 (282)
T ss_dssp HHHHHHHTTCCSCCEECSSSCEEEECC
T ss_pred HHHHHHhcCCceEEEEecCEEEEEEeC
Confidence 555666655544332 3334555553
No 295
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.67 E-value=0.0034 Score=61.49 Aligned_cols=54 Identities=22% Similarity=0.131 Sum_probs=43.9
Q ss_pred HHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc
Q 012571 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER 260 (460)
Q Consensus 195 ~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r 260 (460)
..++.+.+... ..+ ..|||++||+|+.+..+++.| ..++|+|+++.+++.|+++
T Consensus 223 ~l~~~~i~~~~-~~~--------~~vlD~f~GsGt~~~~a~~~g---~~~~g~e~~~~~~~~a~~r 276 (297)
T 2zig_A 223 ELAERLVRMFS-FVG--------DVVLDPFAGTGTTLIAAARWG---RRALGVELVPRYAQLAKER 276 (297)
T ss_dssp HHHHHHHHHHC-CTT--------CEEEETTCTTTHHHHHHHHTT---CEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHHhC-CCC--------CEEEECCCCCCHHHHHHHHcC---CeEEEEeCCHHHHHHHHHH
Confidence 45556665554 233 689999999999999998887 5899999999999999876
No 296
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=96.62 E-value=0.042 Score=52.32 Aligned_cols=98 Identities=20% Similarity=0.197 Sum_probs=62.4
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHH---HHHcCC-CeEEEee-cccCCCCCCCCccEEEEcccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQL---ALERGL-PAMIGNF-ISRQLPYPSLSFDMVHCAQCGII 292 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~---A~~rgl-~~~~~~~-d~~~Lp~~~~sFDlVvs~~~l~~ 292 (460)
.+|||+||++|.|+.+.+.+.. ...|.++|+...-.+. .+..|- .+.+... |...++ ...+|.|+|-.. .
T Consensus 80 ~~VvDLGaapGGWSq~~a~~~g-~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~--~~~~DtllcDIg-e- 154 (267)
T 3p8z_A 80 GRVIDLGCGRGGWSYYCAGLKK-VTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLP--PEKCDTLLCDIG-E- 154 (267)
T ss_dssp EEEEEESCTTSHHHHHHHTSTT-EEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCC--CCCCSEEEECCC-C-
T ss_pred CEEEEcCCCCCcHHHHHHHhcC-CCEEEEEecCCCCccCcchhhhcCcCceEEEeccceeecC--CccccEEEEecC-C-
Confidence 6999999999999998887742 3589999986542210 001122 2456655 655554 367999999642 2
Q ss_pred ccccH----H---HHHHHHHHhcCCCcEEEEEeCCC
Q 012571 293 WDKKE----G---IFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 293 ~~~d~----~---~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
-.+.+ . .+|.-+.+.|++ |-|++-....
T Consensus 155 Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~p 189 (267)
T 3p8z_A 155 SSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNP 189 (267)
T ss_dssp CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCC
T ss_pred CCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccC
Confidence 21221 1 256666788998 7887766543
No 297
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=96.50 E-value=0.022 Score=60.46 Aligned_cols=126 Identities=22% Similarity=0.189 Sum_probs=81.5
Q ss_pred ccccccchhHHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhc----cC--------ceeEEEEeeCCHHH
Q 012571 186 DGLVFDGVKDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSL----KL--------MAVCVAVYEATGSQ 253 (460)
Q Consensus 186 ~~~~fd~~~~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~----g~--------~~~~v~giD~s~~~ 253 (460)
++.+|.. ....+.+.+.+....+ .+|+|-.||+|.|.....+. .. ....+.|.|+++.+
T Consensus 196 ~GqfyTP-~~Vv~lmv~l~~p~~~--------~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~ 266 (530)
T 3ufb_A 196 SGEFYTP-RPVVRFMVEVMDPQLG--------ESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLP 266 (530)
T ss_dssp CCCCCCC-HHHHHHHHHHHCCCTT--------CCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHH
T ss_pred CceECCc-HHHHHHHHHhhccCCC--------CEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHH
Confidence 3455543 4567777787766554 68999999999998766542 11 12468999999999
Q ss_pred HHHHHHc----CCC-eEEEeecccCCCC----CCCCccEEEEccccc-cc-------------cccH-HHHHHHHHHhcC
Q 012571 254 VQLALER----GLP-AMIGNFISRQLPY----PSLSFDMVHCAQCGI-IW-------------DKKE-GIFLIEADRLLK 309 (460)
Q Consensus 254 l~~A~~r----gl~-~~~~~~d~~~Lp~----~~~sFDlVvs~~~l~-~~-------------~~d~-~~~L~ei~RvLk 309 (460)
...|+-. |+. ..+...|+...|. ....||+|+++=-.- .+ ..+. -.++..+.+.||
T Consensus 267 ~~la~mNl~lhg~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk 346 (530)
T 3ufb_A 267 YLLVQMNLLLHGLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLK 346 (530)
T ss_dssp HHHHHHHHHHHTCSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBC
T ss_pred HHHHHHHHHhcCCccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhh
Confidence 9888653 443 3444455444332 235799999972211 01 0111 135677888886
Q ss_pred -------CCcEEEEEeCC
Q 012571 310 -------PGGYFVLTSPE 320 (460)
Q Consensus 310 -------PGG~lvl~~~~ 320 (460)
|||++.+..|.
T Consensus 347 ~~~~~l~~gGr~avVlP~ 364 (530)
T 3ufb_A 347 RPGHGSDNGGRAAVVVPN 364 (530)
T ss_dssp CTTSSSSSCCEEEEEEEH
T ss_pred hhhhccCCCceEEEEecc
Confidence 79999999884
No 298
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=96.48 E-value=0.00076 Score=83.72 Aligned_cols=102 Identities=17% Similarity=0.209 Sum_probs=50.0
Q ss_pred CCeEEEeCCCCchHHHHHHhc-c--C-ceeEEEEeeCCHHHHHHHHHc--CCCeEEEeecccCC-CCCCCCccEEEEccc
Q 012571 217 VQSVLDVGCGFGSFGAHLVSL-K--L-MAVCVAVYEATGSQVQLALER--GLPAMIGNFISRQL-PYPSLSFDMVHCAQC 289 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~-g--~-~~~~v~giD~s~~~l~~A~~r--gl~~~~~~~d~~~L-p~~~~sFDlVvs~~~ 289 (460)
..+|||||.|+|..+..+.+. + . ...+++-.|+|+...+.|+++ .+.+.....|.... ++..++||+|++..+
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~~v 1320 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCNCA 1320 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEECC
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEccc
Confidence 368999999999876555433 1 1 124677789998777666554 12223222233222 345678999999975
Q ss_pred cccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 290 GIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 290 l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
.|-..+....|.+++++|||||++++.+.
T Consensus 1321 -l~~t~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1321 -LATLGDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp ---------------------CCEEEEEEC
T ss_pred -ccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence 46557777899999999999999999775
No 299
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=94.72 E-value=0.14 Score=51.19 Aligned_cols=127 Identities=14% Similarity=0.077 Sum_probs=75.8
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCC---CCCCccEEEEccccccc-
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPY---PSLSFDMVHCAQCGIIW- 293 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~---~~~sFDlVvs~~~l~~~- 293 (460)
.+|||+-||.|.++..+.+.|.....+.++|+++..++..+.+.....+...|+..+.. +...+|+|+...--..+
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpPCq~fS 82 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFT 82 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEECCC-----
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEEcCCCcchh
Confidence 57999999999999999988743356889999999999887764444445556665531 11258999986321111
Q ss_pred -------cccH-HHHHHHHHHh---cC--CCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEEEee
Q 012571 294 -------DKKE-GIFLIEADRL---LK--PGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQ 353 (460)
Q Consensus 294 -------~~d~-~~~L~ei~Rv---Lk--PGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~~~~ 353 (460)
.+|. ..++.++.|+ ++ |- +++.+...... ....+..+....+++++.+...
T Consensus 83 ~ag~~~g~~d~r~~l~~~~~~~i~~~~~~P~--~~~~ENV~~l~-------~~~~~~~i~~~l~~~GY~v~~~ 146 (343)
T 1g55_A 83 RIGRQGDMTDSRTNSFLHILDILPRLQKLPK--YILLENVKGFE-------VSSTRDLLIQTIENCGFQYQEF 146 (343)
T ss_dssp -------------CHHHHHHHHGGGCSSCCS--EEEEEEETTGG-------GSHHHHHHHHHHHHTTEEEEEE
T ss_pred hcCCcCCccCccchHHHHHHHHHHHhcCCCC--EEEEeCCcccc-------CHHHHHHHHHHHHHCCCeeEEE
Confidence 0121 1255555554 45 54 33333332211 1234566666667788776543
No 300
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=94.58 E-value=0.08 Score=50.57 Aligned_cols=54 Identities=19% Similarity=0.067 Sum_probs=43.3
Q ss_pred HHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc
Q 012571 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER 260 (460)
Q Consensus 195 ~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r 260 (460)
..++.+.+... ..+ ..|||..||+|+.+....+.| ..++|+|+++..++.|++|
T Consensus 200 ~l~~~~i~~~~-~~~--------~~vlD~f~GsGtt~~~a~~~g---r~~ig~e~~~~~~~~~~~r 253 (260)
T 1g60_A 200 DLIERIIRASS-NPN--------DLVLDCFMGSGTTAIVAKKLG---RNFIGCDMNAEYVNQANFV 253 (260)
T ss_dssp HHHHHHHHHHC-CTT--------CEEEESSCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHHhC-CCC--------CEEEECCCCCCHHHHHHHHcC---CeEEEEeCCHHHHHHHHHH
Confidence 45555555554 233 689999999999999988876 5899999999999999876
No 301
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=94.35 E-value=0.099 Score=52.28 Aligned_cols=93 Identities=13% Similarity=0.094 Sum_probs=64.9
Q ss_pred CeEEEeCCCC-chHHHHHHhc-cCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCC-----CCCCCCccEEEEcccc
Q 012571 218 QSVLDVGCGF-GSFGAHLVSL-KLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQL-----PYPSLSFDMVHCAQCG 290 (460)
Q Consensus 218 ~~VLDIGCGt-G~~a~~La~~-g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~L-----p~~~~sFDlVvs~~~l 290 (460)
.+||-+|+|. |.++..+++. |. ..|+++|.+++..+.+++.|....+... ..++ ...++.||+|+-.-.
T Consensus 192 ~~VlV~GaG~vG~~a~qlak~~Ga--~~Vi~~~~~~~~~~~a~~lGa~~vi~~~-~~~~~~~~~~~~~gg~D~vid~~g- 267 (371)
T 1f8f_A 192 SSFVTWGAGAVGLSALLAAKVCGA--SIIIAVDIVESRLELAKQLGATHVINSK-TQDPVAAIKEITDGGVNFALESTG- 267 (371)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTC--SEEEEEESCHHHHHHHHHHTCSEEEETT-TSCHHHHHHHHTTSCEEEEEECSC-
T ss_pred CEEEEECCCHHHHHHHHHHHHcCC--CeEEEECCCHHHHHHHHHcCCCEEecCC-ccCHHHHHHHhcCCCCcEEEECCC-
Confidence 7899999875 7788888775 32 2688999999999999888865444311 1110 011236999986531
Q ss_pred ccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 291 ~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
....+.+..+.|+|||.+++....
T Consensus 268 ------~~~~~~~~~~~l~~~G~iv~~G~~ 291 (371)
T 1f8f_A 268 ------SPEILKQGVDALGILGKIAVVGAP 291 (371)
T ss_dssp ------CHHHHHHHHHTEEEEEEEEECCCC
T ss_pred ------CHHHHHHHHHHHhcCCEEEEeCCC
Confidence 124688899999999999987643
No 302
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=93.92 E-value=0.24 Score=49.21 Aligned_cols=93 Identities=15% Similarity=0.095 Sum_probs=63.7
Q ss_pred CeEEEeCCCC-chHHHHHHhccCcee-EEEEeeCCHHHHHHHHHcCCCeEEEee--cccC----CC-CCCCCccEEEEcc
Q 012571 218 QSVLDVGCGF-GSFGAHLVSLKLMAV-CVAVYEATGSQVQLALERGLPAMIGNF--ISRQ----LP-YPSLSFDMVHCAQ 288 (460)
Q Consensus 218 ~~VLDIGCGt-G~~a~~La~~g~~~~-~v~giD~s~~~l~~A~~rgl~~~~~~~--d~~~----Lp-~~~~sFDlVvs~~ 288 (460)
.+||-+|+|. |.++..+++... . .|+++|.+++..+.+++.|....+..- +..+ +. ...+.||+|+-.-
T Consensus 173 ~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 250 (356)
T 1pl8_A 173 HKVLVCGAGPIGMVTLLVAKAMG--AAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECT 250 (356)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHcC--CCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEECC
Confidence 7899999875 777888877521 4 789999999999999888876433211 0000 00 0014699998653
Q ss_pred ccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 289 CGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 289 ~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
. . ...+.+..++|+|||.+++...
T Consensus 251 g------~-~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 251 G------A-EASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp C------C-HHHHHHHHHHSCTTCEEEECSC
T ss_pred C------C-hHHHHHHHHHhcCCCEEEEEec
Confidence 1 1 2367888999999999998764
No 303
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=93.83 E-value=0.8 Score=46.27 Aligned_cols=124 Identities=10% Similarity=-0.027 Sum_probs=77.4
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCC--------CCCCccEEEEccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPY--------PSLSFDMVHCAQC 289 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~--------~~~sFDlVvs~~~ 289 (460)
.+++|+-||.|.++..+.+.|. ..+.++|+++..++..+.+.....+...|+.++.. ....+|+|+...-
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~--~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggpP 80 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGF--DVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGPP 80 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTC--EEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECCC
T ss_pred CeEEEEccCcCHHHHHHHHCCC--cEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEecCC
Confidence 5799999999999999998885 35679999999888776654445555556655531 2467999997532
Q ss_pred cccc-------cccH-HHHHH---HHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEE
Q 012571 290 GIIW-------DKKE-GIFLI---EADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSL 350 (460)
Q Consensus 290 l~~~-------~~d~-~~~L~---ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~ 350 (460)
-..+ .+|. ..++. ++.+.++|. +++.+........ .....++.+. ..+++++.+
T Consensus 81 CQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P~--~~v~ENV~gl~s~----~~~~~~~~i~-~l~~~GY~v 145 (376)
T 3g7u_A 81 CQGFSSIGKGNPDDSRNQLYMHFYRLVSELQPL--FFLAENVPGIMQE----KYSGIRNKAF-NLVSGDYDI 145 (376)
T ss_dssp CCTTC-------CHHHHHHHHHHHHHHHHHCCS--EEEEEECTTTTCG----GGHHHHHHHH-HHHHTTEEE
T ss_pred CCCcccccCCCCCCchHHHHHHHHHHHHHhCCC--EEEEecchHhhcc----CcHHHHHHHH-HHHcCCCcc
Confidence 1111 1222 23444 444556884 4444444333211 3344566666 667778777
No 304
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=93.63 E-value=0.096 Score=51.42 Aligned_cols=94 Identities=10% Similarity=-0.052 Sum_probs=56.9
Q ss_pred CCeEEEeCC------CCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEcccc
Q 012571 217 VQSVLDVGC------GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCG 290 (460)
Q Consensus 217 ~~~VLDIGC------GtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l 290 (460)
..+|||+|+ ..|++. +.+.+.....++++|+.+-.. ... .+..+|...+. ..+.||+|+|-..
T Consensus 110 gmrVLDLGA~s~kg~APGS~V--Lr~~~p~g~~VVavDL~~~~s------da~-~~IqGD~~~~~-~~~k~DLVISDMA- 178 (344)
T 3r24_A 110 NMRVIHFGAGSDKGVAPGTAV--LRQWLPTGTLLVDSDLNDFVS------DAD-STLIGDCATVH-TANKWDLIISDMY- 178 (344)
T ss_dssp TCEEEEESCCCTTSBCHHHHH--HHHHSCTTCEEEEEESSCCBC------SSS-EEEESCGGGEE-ESSCEEEEEECCC-
T ss_pred CCEEEeCCCCCCCCCCCcHHH--HHHhCCCCcEEEEeeCccccc------CCC-eEEEccccccc-cCCCCCEEEecCC-
Confidence 389999996 677743 233333324788899866321 112 33556654432 2478999999421
Q ss_pred ccc----c-cc-----H-HHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 291 IIW----D-KK-----E-GIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 291 ~~~----~-~d-----~-~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
-.. . +. . +.++.-+.++|+|||.|++-....
T Consensus 179 PNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQG 220 (344)
T 3r24_A 179 DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH 220 (344)
T ss_dssp CTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS
T ss_pred CCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecC
Confidence 111 1 11 2 345666778999999999987643
No 305
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=93.58 E-value=0.16 Score=51.41 Aligned_cols=98 Identities=16% Similarity=0.094 Sum_probs=65.3
Q ss_pred CeEEEeCCCC-chHHHHHHhccCcee-EEEEeeCCHHHHHHHHHcCCCeEEEeecccCC-C------CCCCCccEEEEcc
Q 012571 218 QSVLDVGCGF-GSFGAHLVSLKLMAV-CVAVYEATGSQVQLALERGLPAMIGNFISRQL-P------YPSLSFDMVHCAQ 288 (460)
Q Consensus 218 ~~VLDIGCGt-G~~a~~La~~g~~~~-~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~L-p------~~~~sFDlVvs~~ 288 (460)
.+||-+|+|. |.++..+++.. .. .|+++|.+++.++.+++.|.. ..+....+. . .....||+|+-.-
T Consensus 187 ~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~lGa~--~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~ 262 (398)
T 2dph_A 187 SHVYIAGAGPVGRCAAAGARLL--GAACVIVGDQNPERLKLLSDAGFE--TIDLRNSAPLRDQIDQILGKPEVDCGVDAV 262 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCSEEEEEESCHHHHHHHHTTTCE--EEETTSSSCHHHHHHHHHSSSCEEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHc--CCCEEEEEcCCHHHHHHHHHcCCc--EEcCCCcchHHHHHHHHhCCCCCCEEEECC
Confidence 7899999876 78888888752 14 789999999999999877763 332221111 0 1123699998753
Q ss_pred ccccc-------cccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 289 CGIIW-------DKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 289 ~l~~~-------~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
..... ..++...+.+..+.|+|||++++...
T Consensus 263 g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 263 GFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp CTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSC
T ss_pred CCccccccccccccccHHHHHHHHHHHhcCCEEEEecc
Confidence 21110 00123478899999999999987764
No 306
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=93.54 E-value=0.21 Score=50.18 Aligned_cols=77 Identities=17% Similarity=0.111 Sum_probs=52.7
Q ss_pred hHHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc--CCCeEEEeecc
Q 012571 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER--GLPAMIGNFIS 271 (460)
Q Consensus 194 ~~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r--gl~~~~~~~d~ 271 (460)
....+.|.+.+..... +.......|||||.|.|.++..|+++.. ..+++++|+++.++...++. .-++.+...|.
T Consensus 38 ~~i~~~Iv~~~~l~~~--~~~~~~~~VlEIGPG~G~LT~~Ll~~~~-~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~ 114 (353)
T 1i4w_A 38 PTVYNKIFDKLDLTKT--YKHPEELKVLDLYPGVGIQSAIFYNKYC-PRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDP 114 (353)
T ss_dssp HHHHHHHHHHHCGGGT--CCCTTTCEEEEESCTTCHHHHHHHHHHC-CSEEEEECCCHHHHHHHHHHTTTSSCEEECSCT
T ss_pred HHHHHHHHHhccCCcc--cCcCCCCEEEEECCCCCHHHHHHHhhCC-CCEEEEEecCHHHHHHHHHhccCCCEEEEECCc
Confidence 4577788888764321 0000126899999999999999998621 14799999999998877664 23456666665
Q ss_pred cC
Q 012571 272 RQ 273 (460)
Q Consensus 272 ~~ 273 (460)
..
T Consensus 115 l~ 116 (353)
T 1i4w_A 115 YD 116 (353)
T ss_dssp TC
T ss_pred cc
Confidence 33
No 307
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=93.36 E-value=0.11 Score=46.77 Aligned_cols=90 Identities=16% Similarity=0.215 Sum_probs=59.6
Q ss_pred CeEEEeCC--CCchHHHHHHhc-cCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCC-----C-CCCCCccEEEEcc
Q 012571 218 QSVLDVGC--GFGSFGAHLVSL-KLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQL-----P-YPSLSFDMVHCAQ 288 (460)
Q Consensus 218 ~~VLDIGC--GtG~~a~~La~~-g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~L-----p-~~~~sFDlVvs~~ 288 (460)
++||.+|+ |.|..+..++.. | .+++++|.+++..+.+++.+....+ +....+. . ...+.+|+|+.+-
T Consensus 40 ~~vlV~Ga~ggiG~~~~~~~~~~G---~~V~~~~~~~~~~~~~~~~g~~~~~-d~~~~~~~~~~~~~~~~~~~D~vi~~~ 115 (198)
T 1pqw_A 40 ERVLIHSATGGVGMAAVSIAKMIG---ARIYTTAGSDAKREMLSRLGVEYVG-DSRSVDFADEILELTDGYGVDVVLNSL 115 (198)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHHT---CEEEEEESSHHHHHHHHTTCCSEEE-ETTCSTHHHHHHHHTTTCCEEEEEECC
T ss_pred CEEEEeeCCChHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHcCCCEEe-eCCcHHHHHHHHHHhCCCCCeEEEECC
Confidence 78999994 456666666554 4 5788999999988888766654332 2111110 0 1224699998653
Q ss_pred ccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 289 CGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 289 ~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
. ...+.+..+.|+|||++++...
T Consensus 116 g--------~~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 116 A--------GEAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp C--------THHHHHHHHTEEEEEEEEECSC
T ss_pred c--------hHHHHHHHHHhccCCEEEEEcC
Confidence 1 1367889999999999998754
No 308
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=93.20 E-value=0.097 Score=52.35 Aligned_cols=86 Identities=10% Similarity=-0.064 Sum_probs=58.7
Q ss_pred hHHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc--CCCeEEEeecc
Q 012571 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER--GLPAMIGNFIS 271 (460)
Q Consensus 194 ~~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r--gl~~~~~~~d~ 271 (460)
.-..+++.+.+...++ ..++|..+|.|..+..++++-.....|+|+|.++.+++.|+ + .-++.+...+.
T Consensus 43 pVLl~Evl~~L~i~pg--------giyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL~~~Rv~lv~~nF 113 (347)
T 3tka_A 43 TVLLDEAVNGLNIRPD--------GIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TIDDPRFSIIHGPF 113 (347)
T ss_dssp CTTTHHHHHHTCCCTT--------CEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TCCCTTEEEEESCG
T ss_pred cccHHHHHHhhCCCCC--------CEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hhcCCcEEEEeCCH
Confidence 3456667777776655 78999999999999999987333468999999999999883 3 22344444433
Q ss_pred cCCC-----CC-CCCccEEEEcc
Q 012571 272 RQLP-----YP-SLSFDMVHCAQ 288 (460)
Q Consensus 272 ~~Lp-----~~-~~sFDlVvs~~ 288 (460)
.++. .. .+++|.|+...
T Consensus 114 ~~l~~~L~~~g~~~~vDgILfDL 136 (347)
T 3tka_A 114 SALGEYVAERDLIGKIDGILLDL 136 (347)
T ss_dssp GGHHHHHHHTTCTTCEEEEEEEC
T ss_pred HHHHHHHHhcCCCCcccEEEECC
Confidence 3321 00 13578877754
No 309
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=92.93 E-value=0.57 Score=46.26 Aligned_cols=93 Identities=12% Similarity=0.062 Sum_probs=63.2
Q ss_pred CeEEEeCCCC-chHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCC------CC---CCCccEEEEc
Q 012571 218 QSVLDVGCGF-GSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP------YP---SLSFDMVHCA 287 (460)
Q Consensus 218 ~~VLDIGCGt-G~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp------~~---~~sFDlVvs~ 287 (460)
.+||-+|+|. |.++..+++... .+|+++|.+++..+.+++.|....+..-+..++. .. .+.+|+|+-.
T Consensus 170 ~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid~ 247 (352)
T 1e3j_A 170 TTVLVIGAGPIGLVSVLAAKAYG--AFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDC 247 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC--CEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEEEC
Confidence 7899999874 677777776522 4588999999999999888876433211101110 11 2469999865
Q ss_pred cccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 288 QCGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 288 ~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
-. . ...+.+..+.|+|||.+++...
T Consensus 248 ~g------~-~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 248 SG------N-EKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp SC------C-HHHHHHHHHHSCTTCEEEECSC
T ss_pred CC------C-HHHHHHHHHHHhcCCEEEEEec
Confidence 31 1 2367888999999999998764
No 310
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=92.58 E-value=0.37 Score=47.53 Aligned_cols=119 Identities=21% Similarity=0.207 Sum_probs=66.6
Q ss_pred CCeEEEeCCCCchHHHHHH----hccC-ceeEEEEeeCC------------HHHHHHHHHc-----C--CCeEEEeeccc
Q 012571 217 VQSVLDVGCGFGSFGAHLV----SLKL-MAVCVAVYEAT------------GSQVQLALER-----G--LPAMIGNFISR 272 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La----~~g~-~~~~v~giD~s------------~~~l~~A~~r-----g--l~~~~~~~d~~ 272 (460)
.-+|||+|-|+|.++.... +.+. ....++.+|.. ....+...+. + +...+..+|+.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHH
Confidence 3589999999998654322 2222 22455666631 1222222222 1 12223333332
Q ss_pred -CCC-CCCCCccEEEEccccccccccH----HHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHh
Q 012571 273 -QLP-YPSLSFDMVHCAQCGIIWDKKE----GIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKI 346 (460)
Q Consensus 273 -~Lp-~~~~sFDlVvs~~~l~~~~~d~----~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~ 346 (460)
.++ +.+..||+|+.-. +-.- .++ ..++++++++++|||.|+-.... ..++.-.+..
T Consensus 177 ~~l~~l~~~~~Da~flDg-FsP~-kNPeLWs~e~f~~l~~~~~pgg~laTYtaa----------------g~VRR~L~~a 238 (308)
T 3vyw_A 177 KRIKEVENFKADAVFHDA-FSPY-KNPELWTLDFLSLIKERIDEKGYWVSYSSS----------------LSVRKSLLTL 238 (308)
T ss_dssp HHGGGCCSCCEEEEEECC-SCTT-TSGGGGSHHHHHHHHTTEEEEEEEEESCCC----------------HHHHHHHHHT
T ss_pred HHHhhhcccceeEEEeCC-CCcc-cCcccCCHHHHHHHHHHhCCCcEEEEEeCc----------------HHHHHHHHHC
Confidence 232 3445799999742 2211 222 36999999999999998743321 3456667788
Q ss_pred CeEEEee
Q 012571 347 CWSLIAQ 353 (460)
Q Consensus 347 ~w~~~~~ 353 (460)
||++...
T Consensus 239 GF~V~k~ 245 (308)
T 3vyw_A 239 GFKVGSS 245 (308)
T ss_dssp TCEEEEE
T ss_pred CCEEEec
Confidence 9987543
No 311
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=92.20 E-value=0.79 Score=45.46 Aligned_cols=128 Identities=7% Similarity=-0.006 Sum_probs=78.1
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEE-EEeeCCHHHHHHHHHcCCCeEEEeecccCCC---CCCCCccEEEEccccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCV-AVYEATGSQVQLALERGLPAMIGNFISRQLP---YPSLSFDMVHCAQCGIIW 293 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v-~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp---~~~~sFDlVvs~~~l~~~ 293 (460)
.+++|+-||.|.+...+.+.|.....+ .++|+++...+..+.+.... +...|+.++. ++...+|+++...--..+
T Consensus 11 ~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-~~~~DI~~~~~~~i~~~~~Dil~ggpPCQ~f 89 (327)
T 3qv2_A 11 VNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE-VQVKNLDSISIKQIESLNCNTWFMSPPCQPY 89 (327)
T ss_dssp EEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC-CBCCCTTTCCHHHHHHTCCCEEEECCCCTTC
T ss_pred CEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC-cccCChhhcCHHHhccCCCCEEEecCCccCc
Confidence 589999999999999999887532356 79999998887665542221 3344555553 222368999975321222
Q ss_pred ----------cccH-HHHHHHHHH-hcCC---CcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEEEee
Q 012571 294 ----------DKKE-GIFLIEADR-LLKP---GGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQ 353 (460)
Q Consensus 294 ----------~~d~-~~~L~ei~R-vLkP---GG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~~~~ 353 (460)
.+|. ..++.++.| +++- --.+++.+...... ....++.+....+++++.+...
T Consensus 90 s~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl~-------~~~~~~~i~~~l~~~GY~v~~~ 157 (327)
T 3qv2_A 90 NNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLFK-------ESLVFKEIYNILIKNQYYIKDI 157 (327)
T ss_dssp SHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGGGG-------GSHHHHHHHHHHHHTTCEEEEE
T ss_pred ccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhhhc-------ChHHHHHHHHHHHhCCCEEEEE
Confidence 1233 357777777 6532 12455555543321 1245666666677788776544
No 312
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=92.07 E-value=0.29 Score=47.87 Aligned_cols=92 Identities=17% Similarity=0.142 Sum_probs=61.0
Q ss_pred CeEEEeCC--CCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCC-----CCCCCccEEEEcccc
Q 012571 218 QSVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP-----YPSLSFDMVHCAQCG 290 (460)
Q Consensus 218 ~~VLDIGC--GtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp-----~~~~sFDlVvs~~~l 290 (460)
++||-+|+ |.|..+..++.... .+++++|.+++.++.+++.+....+...+..++. ...+.+|+|+.+-.
T Consensus 147 ~~vlV~Ga~ggiG~~~~~~~~~~G--~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g- 223 (333)
T 1v3u_A 147 ETVLVSAAAGAVGSVVGQIAKLKG--CKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVG- 223 (333)
T ss_dssp CEEEEESTTBHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSC-
T ss_pred CEEEEecCCCcHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEECCC-
Confidence 78999997 56666666665422 5788999999988888666654333211101110 11247999987642
Q ss_pred ccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 291 ~~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
...+.+..+.|+|||++++...
T Consensus 224 -------~~~~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 224 -------GEFLNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp -------HHHHHHHHTTEEEEEEEEECCC
T ss_pred -------hHHHHHHHHHHhcCCEEEEEec
Confidence 1257888899999999988764
No 313
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=92.03 E-value=0.45 Score=47.58 Aligned_cols=94 Identities=21% Similarity=0.196 Sum_probs=65.2
Q ss_pred CeEEEeCCCC-chHHHHHHhc-cCceeEEEEeeCCHHHHHHHHHcCCCeEEEeec------ccC-CCCCCCCccEEEEcc
Q 012571 218 QSVLDVGCGF-GSFGAHLVSL-KLMAVCVAVYEATGSQVQLALERGLPAMIGNFI------SRQ-LPYPSLSFDMVHCAQ 288 (460)
Q Consensus 218 ~~VLDIGCGt-G~~a~~La~~-g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d------~~~-Lp~~~~sFDlVvs~~ 288 (460)
.+||=+|+|. |.++..+++. |. ..|+++|.+++..+.+++.|....+...+ ..+ .....+.||+|+-.-
T Consensus 184 ~~VlV~GaG~vG~~aiqlak~~Ga--~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~ 261 (370)
T 4ej6_A 184 STVAILGGGVIGLLTVQLARLAGA--TTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECA 261 (370)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCC--CEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECC
Confidence 7899999865 6777777775 32 27889999999999999888765443111 011 002234799998652
Q ss_pred ccccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 289 CGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 289 ~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
. ....+.+..+.|++||.+++....
T Consensus 262 G-------~~~~~~~~~~~l~~~G~vv~~G~~ 286 (370)
T 4ej6_A 262 G-------VAETVKQSTRLAKAGGTVVILGVL 286 (370)
T ss_dssp C-------CHHHHHHHHHHEEEEEEEEECSCC
T ss_pred C-------CHHHHHHHHHHhccCCEEEEEecc
Confidence 1 124788999999999999987654
No 314
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=91.96 E-value=0.41 Score=47.26 Aligned_cols=89 Identities=20% Similarity=0.138 Sum_probs=64.4
Q ss_pred CeEEEeCCCC-chHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEcccccccccc
Q 012571 218 QSVLDVGCGF-GSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKK 296 (460)
Q Consensus 218 ~~VLDIGCGt-G~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~d 296 (460)
.+||-+|+|. |.++..+++... .+|+++|.+++..+.+++.|....+ .+...+ . ..+|+|+-.-. . +
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~lGa~~v~--~~~~~~--~-~~~D~vid~~g--~--~- 245 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAMG--AEVSVFARNEHKKQDALSMGVKHFY--TDPKQC--K-EELDFIISTIP--T--H- 245 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT--CEEEEECSSSTTHHHHHHTTCSEEE--SSGGGC--C-SCEEEEEECCC--S--C-
T ss_pred CEEEEECCcHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHhcCCCeec--CCHHHH--h-cCCCEEEECCC--c--H-
Confidence 7899999875 777778777622 5799999999999999888876555 222222 2 27999986532 1 1
Q ss_pred HHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 297 EGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 297 ~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
..+.+..+.|+|||.+++....
T Consensus 246 --~~~~~~~~~l~~~G~iv~~G~~ 267 (348)
T 3two_A 246 --YDLKDYLKLLTYNGDLALVGLP 267 (348)
T ss_dssp --CCHHHHHTTEEEEEEEEECCCC
T ss_pred --HHHHHHHHHHhcCCEEEEECCC
Confidence 1467888999999999988653
No 315
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=91.44 E-value=0.48 Score=47.70 Aligned_cols=97 Identities=16% Similarity=0.090 Sum_probs=65.7
Q ss_pred CeEEEeCCCC-chHHHHHHhc-cCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccC-CC------CCCCCccEEEEcc
Q 012571 218 QSVLDVGCGF-GSFGAHLVSL-KLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQ-LP------YPSLSFDMVHCAQ 288 (460)
Q Consensus 218 ~~VLDIGCGt-G~~a~~La~~-g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~-Lp------~~~~sFDlVvs~~ 288 (460)
.+||-+|+|. |.++..+++. |. ..|+++|.+++.++.+++.|.. ..+..... +. .....+|+|+-.-
T Consensus 187 ~~VlV~GaG~vG~~aiqlAk~~Ga--~~Vi~~~~~~~~~~~a~~lGa~--~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~ 262 (398)
T 1kol_A 187 STVYVAGAGPVGLAAAASARLLGA--AVVIVGDLNPARLAHAKAQGFE--IADLSLDTPLHEQIAALLGEPEVDCAVDAV 262 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--SEEEEEESCHHHHHHHHHTTCE--EEETTSSSCHHHHHHHHHSSSCEEEEEECC
T ss_pred CEEEEECCcHHHHHHHHHHHHCCC--CeEEEEcCCHHHHHHHHHcCCc--EEccCCcchHHHHHHHHhCCCCCCEEEECC
Confidence 7899999875 7788888875 32 2688999999999999888864 22221111 00 1124699998753
Q ss_pred ccc---------cccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 289 CGI---------IWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 289 ~l~---------~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
... |. .++...+.+..+.|++||.+++...
T Consensus 263 G~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 263 GFEARGHGHEGAKH-EAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp CTTCBCSSTTGGGS-BCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred CCcccccccccccc-cchHHHHHHHHHHHhcCCEEEEecc
Confidence 221 11 2334578899999999999988764
No 316
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=91.41 E-value=0.34 Score=47.91 Aligned_cols=93 Identities=17% Similarity=0.108 Sum_probs=64.4
Q ss_pred CeEEEeCCCC-chHHHHHHhccCcee-EEEEeeCCHHHHHHHHHcCCCeEEEeecccCCC------CCCCCccEEEEccc
Q 012571 218 QSVLDVGCGF-GSFGAHLVSLKLMAV-CVAVYEATGSQVQLALERGLPAMIGNFISRQLP------YPSLSFDMVHCAQC 289 (460)
Q Consensus 218 ~~VLDIGCGt-G~~a~~La~~g~~~~-~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp------~~~~sFDlVvs~~~ 289 (460)
.+||=+|+|. |.++..+++... . .|+++|.+++.++.+++.|....+..- ..++. .....||+|+-.-.
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~G--a~~Vi~~~~~~~~~~~~~~lGa~~vi~~~-~~~~~~~v~~~t~g~g~D~v~d~~g 244 (352)
T 3fpc_A 168 DTVCVIGIGPVGLMSVAGANHLG--AGRIFAVGSRKHCCDIALEYGATDIINYK-NGDIVEQILKATDGKGVDKVVIAGG 244 (352)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTT--CSSEEEECCCHHHHHHHHHHTCCEEECGG-GSCHHHHHHHHTTTCCEEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHcC--CcEEEEECCCHHHHHHHHHhCCceEEcCC-CcCHHHHHHHHcCCCCCCEEEECCC
Confidence 7899999875 777777777622 3 688899999999999988876444321 11110 12346999986531
Q ss_pred cccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 290 GIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 290 l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
. ...+.+..+.|+|||.++.....
T Consensus 245 ------~-~~~~~~~~~~l~~~G~~v~~G~~ 268 (352)
T 3fpc_A 245 ------D-VHTFAQAVKMIKPGSDIGNVNYL 268 (352)
T ss_dssp ------C-TTHHHHHHHHEEEEEEEEECCCC
T ss_pred ------C-hHHHHHHHHHHhcCCEEEEeccc
Confidence 1 13678899999999999987653
No 317
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=91.23 E-value=0.6 Score=45.82 Aligned_cols=93 Identities=16% Similarity=0.087 Sum_probs=65.1
Q ss_pred CeEEEeCCCC-chHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCC----CCCCCccEEEEcccccc
Q 012571 218 QSVLDVGCGF-GSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP----YPSLSFDMVHCAQCGII 292 (460)
Q Consensus 218 ~~VLDIGCGt-G~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp----~~~~sFDlVvs~~~l~~ 292 (460)
.+||-+|+|. |..+..+++... .+|+++|.+++..+.+++.|....+...+ .++. -..+.+|+|+-.-.
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~lGa~~~i~~~~-~~~~~~~~~~~g~~d~vid~~g--- 241 (340)
T 3s2e_A 168 QWVVISGIGGLGHVAVQYARAMG--LRVAAVDIDDAKLNLARRLGAEVAVNARD-TDPAAWLQKEIGGAHGVLVTAV--- 241 (340)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHTTCSEEEETTT-SCHHHHHHHHHSSEEEEEESSC---
T ss_pred CEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHHcCCCEEEeCCC-cCHHHHHHHhCCCCCEEEEeCC---
Confidence 7899999875 888888887632 58999999999999998888655443211 1100 01136888875421
Q ss_pred ccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 293 WDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 293 ~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
....+.+..+.|+|||.+++....
T Consensus 242 ----~~~~~~~~~~~l~~~G~iv~~G~~ 265 (340)
T 3s2e_A 242 ----SPKAFSQAIGMVRRGGTIALNGLP 265 (340)
T ss_dssp ----CHHHHHHHHHHEEEEEEEEECSCC
T ss_pred ----CHHHHHHHHHHhccCCEEEEeCCC
Confidence 124788999999999999987643
No 318
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=90.93 E-value=1.2 Score=44.24 Aligned_cols=127 Identities=11% Similarity=0.036 Sum_probs=78.1
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCC---CCCCCccEEEEccccccc-
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP---YPSLSFDMVHCAQCGIIW- 293 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp---~~~~sFDlVvs~~~l~~~- 293 (460)
.+++|+-||.|.+...+.+.|.....+.++|+++...+.-+.+.....+...|+.++. ++...+|+++...--..+
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~~~~~~~~D~l~ggpPCQ~fS 83 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQVIKKWNVDTILMSPPCQPFT 83 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCHHHHHHTTCCEEEECCCCCCSE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCHHHhccCCCCEEEecCCCcchh
Confidence 4799999999999999988875434678999999988877665433334445555553 222368999975321111
Q ss_pred -------cccHH-HHHHHHHHhc---C-CCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEEEee
Q 012571 294 -------DKKEG-IFLIEADRLL---K-PGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQ 353 (460)
Q Consensus 294 -------~~d~~-~~L~ei~RvL---k-PGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~~~~ 353 (460)
.+|.. .++.++.|++ + | .+++.+...... ....++.+....+++++.+...
T Consensus 84 ~ag~~~~~~d~r~~L~~~~~r~i~~~~~P--~~~vlENV~gl~-------~~~~~~~i~~~l~~~GY~v~~~ 146 (333)
T 4h0n_A 84 RNGKYLDDNDPRTNSFLYLIGILDQLDNV--DYILMENVKGFE-------NSTVRNLFIDKLKECNFIYQEF 146 (333)
T ss_dssp ETTEECCTTCTTSCCHHHHHHHGGGCTTC--CEEEEEECTTGG-------GSHHHHHHHHHHHHTTEEEEEE
T ss_pred hhhhccCCcCcccccHHHHHHHHHHhcCC--CEEEEecchhhh-------hhhHHHHHHHHHHhCCCeEEEE
Confidence 12222 3555555554 4 5 455555544332 1234666666677788877544
No 319
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=90.87 E-value=0.27 Score=48.98 Aligned_cols=93 Identities=15% Similarity=0.112 Sum_probs=64.7
Q ss_pred CeEEEeCCCC-chHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCC------CCCCCccEEEEcccc
Q 012571 218 QSVLDVGCGF-GSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP------YPSLSFDMVHCAQCG 290 (460)
Q Consensus 218 ~~VLDIGCGt-G~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp------~~~~sFDlVvs~~~l 290 (460)
.+||=+|+|. |..+..+++.. ..+++++|.+++.++.+++.|....+. .+..++. .....+|+|+-.-.
T Consensus 191 ~~VlV~G~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~lGa~~vi~-~~~~~~~~~v~~~~~g~g~D~vid~~g- 266 (363)
T 3uog_A 191 DRVVVQGTGGVALFGLQIAKAT--GAEVIVTSSSREKLDRAFALGADHGIN-RLEEDWVERVYALTGDRGADHILEIAG- 266 (363)
T ss_dssp CEEEEESSBHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTCSEEEE-TTTSCHHHHHHHHHTTCCEEEEEEETT-
T ss_pred CEEEEECCCHHHHHHHHHHHHc--CCEEEEEecCchhHHHHHHcCCCEEEc-CCcccHHHHHHHHhCCCCceEEEECCC-
Confidence 7899999774 67777777652 257899999999999998888765443 2111110 12347999987532
Q ss_pred ccccccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 291 ~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
. ..+.+..+.|+|||.+++.....
T Consensus 267 ---~----~~~~~~~~~l~~~G~iv~~G~~~ 290 (363)
T 3uog_A 267 ---G----AGLGQSLKAVAPDGRISVIGVLE 290 (363)
T ss_dssp ---S----SCHHHHHHHEEEEEEEEEECCCS
T ss_pred ---h----HHHHHHHHHhhcCCEEEEEecCC
Confidence 1 24677889999999999886543
No 320
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=90.75 E-value=0.38 Score=48.16 Aligned_cols=90 Identities=21% Similarity=0.221 Sum_probs=62.4
Q ss_pred CeEEEeCCCC-chHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeec---ccCCCCCCCCccEEEEccccccc
Q 012571 218 QSVLDVGCGF-GSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFI---SRQLPYPSLSFDMVHCAQCGIIW 293 (460)
Q Consensus 218 ~~VLDIGCGt-G~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d---~~~Lp~~~~sFDlVvs~~~l~~~ 293 (460)
.+||-+|+|. |.++..+++.. ..+|+++|.+++.++.+++.|....+...+ .+.+. +.+|+|+-.-..
T Consensus 196 ~~VlV~GaG~vG~~aiqlak~~--Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~---~g~Dvvid~~g~--- 267 (369)
T 1uuf_A 196 KKVGVVGIGGLGHMGIKLAHAM--GAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHL---KSFDFILNTVAA--- 267 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTT---TCEEEEEECCSS---
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhh---cCCCEEEECCCC---
Confidence 7899999874 77777777752 246899999999999998877654432111 11222 579999865321
Q ss_pred cccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 294 DKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 294 ~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
+ ..+.+..+.|+|||.++....
T Consensus 268 -~---~~~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 268 -P---HNLDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp -C---CCHHHHHTTEEEEEEEEECCC
T ss_pred -H---HHHHHHHHHhccCCEEEEecc
Confidence 1 146678899999999988754
No 321
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=90.54 E-value=0.62 Score=46.44 Aligned_cols=93 Identities=11% Similarity=-0.030 Sum_probs=62.7
Q ss_pred CeEEEeCCCC-chHHHHHHhccCcee-EEEEeeCCHHHHHHHHHcCCCeEEEeecc-cCCC-----CCCCCccEEEEccc
Q 012571 218 QSVLDVGCGF-GSFGAHLVSLKLMAV-CVAVYEATGSQVQLALERGLPAMIGNFIS-RQLP-----YPSLSFDMVHCAQC 289 (460)
Q Consensus 218 ~~VLDIGCGt-G~~a~~La~~g~~~~-~v~giD~s~~~l~~A~~rgl~~~~~~~d~-~~Lp-----~~~~sFDlVvs~~~ 289 (460)
.+||-+|+|. |.++..+++... . .|+++|.+++..+.+++.|....+...+. .++. ..++.+|+|+-.-.
T Consensus 193 ~~VlV~GaG~vG~~a~qla~~~G--a~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 270 (374)
T 2jhf_A 193 STCAVFGLGGVGLSVIMGCKAAG--AARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIG 270 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC--CCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECCC
Confidence 7899999764 677777776521 4 78899999999999988776543321110 1110 11247999986531
Q ss_pred cccccccHHHHHHHHHHhcCCC-cEEEEEeC
Q 012571 290 GIIWDKKEGIFLIEADRLLKPG-GYFVLTSP 319 (460)
Q Consensus 290 l~~~~~d~~~~L~ei~RvLkPG-G~lvl~~~ 319 (460)
. ...+.+..+.|++| |.+++...
T Consensus 271 ------~-~~~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 271 ------R-LDTMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp ------C-HHHHHHHHHHBCTTTCEEEECSC
T ss_pred ------C-HHHHHHHHHHhhcCCcEEEEecc
Confidence 1 23678889999999 99988764
No 322
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=90.42 E-value=0.53 Score=46.95 Aligned_cols=94 Identities=12% Similarity=-0.007 Sum_probs=63.1
Q ss_pred CeEEEeCCCC-chHHHHHHhccCcee-EEEEeeCCHHHHHHHHHcCCCeEEEeecc-cCCC-----CCCCCccEEEEccc
Q 012571 218 QSVLDVGCGF-GSFGAHLVSLKLMAV-CVAVYEATGSQVQLALERGLPAMIGNFIS-RQLP-----YPSLSFDMVHCAQC 289 (460)
Q Consensus 218 ~~VLDIGCGt-G~~a~~La~~g~~~~-~v~giD~s~~~l~~A~~rgl~~~~~~~d~-~~Lp-----~~~~sFDlVvs~~~ 289 (460)
.+||-+|+|. |.++..+++.. .. .|+++|.+++..+.+++.|....+...+. .++. ...+.+|+|+-.-.
T Consensus 194 ~~VlV~GaG~vG~~a~qla~~~--Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 271 (374)
T 1cdo_A 194 STCAVFGLGAVGLAAVMGCHSA--GAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVG 271 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHc--CCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECCC
Confidence 7899999764 67777777652 14 78899999999999988776543321110 1110 11236999986531
Q ss_pred cccccccHHHHHHHHHHhcCCC-cEEEEEeCC
Q 012571 290 GIIWDKKEGIFLIEADRLLKPG-GYFVLTSPE 320 (460)
Q Consensus 290 l~~~~~d~~~~L~ei~RvLkPG-G~lvl~~~~ 320 (460)
. ...+.+..+.|+|| |.+++....
T Consensus 272 ------~-~~~~~~~~~~l~~~~G~iv~~G~~ 296 (374)
T 1cdo_A 272 ------N-VGVMRNALESCLKGWGVSVLVGWT 296 (374)
T ss_dssp ------C-HHHHHHHHHTBCTTTCEEEECSCC
T ss_pred ------C-HHHHHHHHHHhhcCCcEEEEEcCC
Confidence 1 23678899999999 999887643
No 323
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=90.31 E-value=0.37 Score=47.54 Aligned_cols=94 Identities=14% Similarity=0.102 Sum_probs=64.1
Q ss_pred CeEEEeCCCC-chHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeec----ccCCCCCCCCccEEEEcccccc
Q 012571 218 QSVLDVGCGF-GSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFI----SRQLPYPSLSFDMVHCAQCGII 292 (460)
Q Consensus 218 ~~VLDIGCGt-G~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d----~~~Lp~~~~sFDlVvs~~~l~~ 292 (460)
.+||-+|+|. |.++..+++......+|+++|.+++..+.+++.|....+...+ ...+. ....+|+|+-.-.
T Consensus 172 ~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~-~g~g~D~vid~~g--- 247 (344)
T 2h6e_A 172 PVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLT-DGLGASIAIDLVG--- 247 (344)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHH-TTCCEEEEEESSC---
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhh-cCCCccEEEECCC---
Confidence 7899999864 6777777765300257999999999999998888654432111 11111 1236999987632
Q ss_pred ccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 293 WDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 293 ~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
. ...+.++.+.|+|||.++....
T Consensus 248 ---~-~~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 248 ---T-EETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp ---C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred ---C-hHHHHHHHHHhhcCCEEEEeCC
Confidence 1 2367889999999999988764
No 324
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=90.09 E-value=0.64 Score=46.32 Aligned_cols=93 Identities=12% Similarity=-0.023 Sum_probs=63.2
Q ss_pred CeEEEeCCCC-chHHHHHHhc-cCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecc-cCC-----CCCCCCccEEEEccc
Q 012571 218 QSVLDVGCGF-GSFGAHLVSL-KLMAVCVAVYEATGSQVQLALERGLPAMIGNFIS-RQL-----PYPSLSFDMVHCAQC 289 (460)
Q Consensus 218 ~~VLDIGCGt-G~~a~~La~~-g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~-~~L-----p~~~~sFDlVvs~~~ 289 (460)
.+||-+|+|. |.++..+++. |. ..|+++|.+++..+.+++.|....+..-+. .++ ....+.+|+|+-.-.
T Consensus 193 ~~VlV~GaG~vG~~aiqlak~~Ga--~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g 270 (373)
T 1p0f_A 193 STCAVFGLGGVGFSAIVGCKAAGA--SRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAG 270 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC--SEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCC--CeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCC
Confidence 7899999864 6777777765 32 278899999999999988787544321110 111 011247999986531
Q ss_pred cccccccHHHHHHHHHHhcCCC-cEEEEEeC
Q 012571 290 GIIWDKKEGIFLIEADRLLKPG-GYFVLTSP 319 (460)
Q Consensus 290 l~~~~~d~~~~L~ei~RvLkPG-G~lvl~~~ 319 (460)
. ...+.+..+.|++| |.+++...
T Consensus 271 ------~-~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 271 ------R-IETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp ------C-HHHHHHHHHTBCTTTCEEEECCC
T ss_pred ------C-HHHHHHHHHHHhcCCCEEEEEcc
Confidence 1 23678899999999 99988764
No 325
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=90.06 E-value=1.7 Score=42.92 Aligned_cols=125 Identities=16% Similarity=0.077 Sum_probs=72.3
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCC-CCCCccEEEEccccccc---
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPY-PSLSFDMVHCAQCGIIW--- 293 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~-~~~sFDlVvs~~~l~~~--- 293 (460)
.++||+.||.|.++..+.+.|. ..+.++|+++..++..+.+..... ..|+.++.. .-..+|+|+...--..+
T Consensus 12 ~~~~dLFaG~Gg~~~g~~~aG~--~~v~~~e~d~~a~~t~~~N~~~~~--~~Di~~~~~~~~~~~D~l~~gpPCQ~fS~a 87 (327)
T 2c7p_A 12 LRFIDLFAGLGGFRLALESCGA--ECVYSNEWDKYAQEVYEMNFGEKP--EGDITQVNEKTIPDHDILCAGFPCQAFSIS 87 (327)
T ss_dssp CEEEEETCTTTHHHHHHHHTTC--EEEEEECCCHHHHHHHHHHHSCCC--BSCGGGSCGGGSCCCSEEEEECCCTTTCTT
T ss_pred CcEEEECCCcCHHHHHHHHCCC--eEEEEEeCCHHHHHHHHHHcCCCC--cCCHHHcCHhhCCCCCEEEECCCCCCcchh
Confidence 6899999999999999998885 457889999998887665522211 344444431 11248999985211111
Q ss_pred -----cccHH-HHHH---HHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEEEe
Q 012571 294 -----DKKEG-IFLI---EADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIA 352 (460)
Q Consensus 294 -----~~d~~-~~L~---ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~~~ 352 (460)
.+|.. .++. ++.+.++|- +++.+........ .....++.+....+++++.+..
T Consensus 88 g~~~g~~d~r~~L~~~~~r~i~~~~P~--~~~~ENV~gl~~~----~~~~~~~~i~~~l~~~GY~v~~ 149 (327)
T 2c7p_A 88 GKQKGFEDSRGTLFFDIARIVREKKPK--VVFMENVKNFASH----DNGNTLEVVKNTMNELDYSFHA 149 (327)
T ss_dssp SCCCGGGSTTSCHHHHHHHHHHHHCCS--EEEEEEEGGGGTG----GGGHHHHHHHHHHHHTTBCCEE
T ss_pred cccCCCcchhhHHHHHHHHHHHhccCc--EEEEeCcHHHHhc----cccHHHHHHHHHHHhCCCEEEE
Confidence 12222 2333 344456885 4444433322111 2234566666666777765533
No 326
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=89.96 E-value=0.64 Score=46.23 Aligned_cols=93 Identities=13% Similarity=-0.024 Sum_probs=62.9
Q ss_pred CeEEEeCCCC-chHHHHHHhc-cCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecc-cCCC-----CCCCCccEEEEccc
Q 012571 218 QSVLDVGCGF-GSFGAHLVSL-KLMAVCVAVYEATGSQVQLALERGLPAMIGNFIS-RQLP-----YPSLSFDMVHCAQC 289 (460)
Q Consensus 218 ~~VLDIGCGt-G~~a~~La~~-g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~-~~Lp-----~~~~sFDlVvs~~~ 289 (460)
.+||-+|+|. |.++..+++. |. ..|+++|.+++..+.+++.|....+...+. .++. ...+.+|+|+-.-.
T Consensus 192 ~~VlV~GaG~vG~~avqla~~~Ga--~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g 269 (373)
T 2fzw_A 192 SVCAVFGLGGVGLAVIMGCKVAGA--SRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIG 269 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC--SEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCC--CeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEECCC
Confidence 7899999764 6677777765 32 278899999999999988887544321110 1110 11247999986531
Q ss_pred cccccccHHHHHHHHHHhcCCC-cEEEEEeC
Q 012571 290 GIIWDKKEGIFLIEADRLLKPG-GYFVLTSP 319 (460)
Q Consensus 290 l~~~~~d~~~~L~ei~RvLkPG-G~lvl~~~ 319 (460)
. ...+.+..+.|+|| |.+++...
T Consensus 270 ------~-~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 270 ------N-VKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp ------C-HHHHHHHHHTBCTTTCEEEECSC
T ss_pred ------c-HHHHHHHHHhhccCCcEEEEEec
Confidence 1 23678899999999 99998764
No 327
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=89.80 E-value=0.63 Score=45.67 Aligned_cols=92 Identities=12% Similarity=0.040 Sum_probs=61.5
Q ss_pred CeEEEeCC--CCchHHHHHHhccCceeEEEEeeCCHHHHHHHH-HcCCCeEEEeecccCCC-----CCCCCccEEEEccc
Q 012571 218 QSVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLAL-ERGLPAMIGNFISRQLP-----YPSLSFDMVHCAQC 289 (460)
Q Consensus 218 ~~VLDIGC--GtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~-~rgl~~~~~~~d~~~Lp-----~~~~sFDlVvs~~~ 289 (460)
.+||-+|+ |.|..+..+++... .+++++|.+++.++.++ +.|....+...+...+. ...+.+|+|+.+-.
T Consensus 157 ~~vlI~Ga~g~iG~~~~~~a~~~G--~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g 234 (345)
T 2j3h_A 157 ETVYVSAASGAVGQLVGQLAKMMG--CYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVG 234 (345)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEESSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEECCC
Confidence 78999997 56777777776522 57899999999988887 45654333211111110 01246999987632
Q ss_pred cccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 290 GIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 290 l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
. ..+.+..+.|+|||.+++...
T Consensus 235 ------~--~~~~~~~~~l~~~G~~v~~G~ 256 (345)
T 2j3h_A 235 ------G--KMLDAVLVNMNMHGRIAVCGM 256 (345)
T ss_dssp ------H--HHHHHHHTTEEEEEEEEECCC
T ss_pred ------H--HHHHHHHHHHhcCCEEEEEcc
Confidence 1 267888999999999988754
No 328
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=89.70 E-value=0.53 Score=47.03 Aligned_cols=94 Identities=13% Similarity=0.032 Sum_probs=64.1
Q ss_pred CeEEEeCCCC-chHHHHHHhc-cCceeEEEEeeCCHHHHHHHHHcCCCeEEEeec-ccCC-----CCCCCCccEEEEccc
Q 012571 218 QSVLDVGCGF-GSFGAHLVSL-KLMAVCVAVYEATGSQVQLALERGLPAMIGNFI-SRQL-----PYPSLSFDMVHCAQC 289 (460)
Q Consensus 218 ~~VLDIGCGt-G~~a~~La~~-g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d-~~~L-----p~~~~sFDlVvs~~~ 289 (460)
.+||=+|+|. |.++..+++. |. ..|+++|.+++.++.+++.|....+...+ ...+ ...++.+|+|+-.-.
T Consensus 195 ~~VlV~GaG~vG~~a~q~a~~~Ga--~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g 272 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVAEGAKTAGA--SRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIG 272 (378)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTC--SCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCC--CeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCC
Confidence 6899999873 7777777775 32 26889999999999998877655433211 0111 012347999986531
Q ss_pred cccccccHHHHHHHHHHhcCCC-cEEEEEeCC
Q 012571 290 GIIWDKKEGIFLIEADRLLKPG-GYFVLTSPE 320 (460)
Q Consensus 290 l~~~~~d~~~~L~ei~RvLkPG-G~lvl~~~~ 320 (460)
. ...+.+..+.|++| |++++....
T Consensus 273 ------~-~~~~~~~~~~l~~g~G~iv~~G~~ 297 (378)
T 3uko_A 273 ------N-VSVMRAALECCHKGWGTSVIVGVA 297 (378)
T ss_dssp ------C-HHHHHHHHHTBCTTTCEEEECSCC
T ss_pred ------C-HHHHHHHHHHhhccCCEEEEEccc
Confidence 1 23688899999997 999987653
No 329
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=89.65 E-value=1.1 Score=44.67 Aligned_cols=90 Identities=18% Similarity=0.197 Sum_probs=64.2
Q ss_pred CeEEEeC-CC-CchHHHHHHhc-cCceeEEEEeeCCHHHHHHHHHcCCCeEEEeec-----ccCCCCCCCCccEEEEccc
Q 012571 218 QSVLDVG-CG-FGSFGAHLVSL-KLMAVCVAVYEATGSQVQLALERGLPAMIGNFI-----SRQLPYPSLSFDMVHCAQC 289 (460)
Q Consensus 218 ~~VLDIG-CG-tG~~a~~La~~-g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d-----~~~Lp~~~~sFDlVvs~~~ 289 (460)
.+||=+| +| .|.++..+++. +. .+|+++|.+++..+.+++.|....+...+ ..+ ...+.+|+|+-.-
T Consensus 173 ~~VlV~Ga~G~vG~~a~qlak~~~g--~~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~--~~~~g~Dvvid~~- 247 (363)
T 4dvj_A 173 PAILIVGGAGGVGSIAVQIARQRTD--LTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAA--LGLGAPAFVFSTT- 247 (363)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHHCC--SEEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHT--TCSCCEEEEEECS-
T ss_pred CEEEEECCCCHHHHHHHHHHHHhcC--CEEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHH--hcCCCceEEEECC-
Confidence 6899998 44 58888888875 33 58999999999999998887654432110 111 2345799988652
Q ss_pred cccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012571 290 GIIWDKKEGIFLIEADRLLKPGGYFVLTS 318 (460)
Q Consensus 290 l~~~~~d~~~~L~ei~RvLkPGG~lvl~~ 318 (460)
.....+.++.+.|+|||.+++..
T Consensus 248 ------g~~~~~~~~~~~l~~~G~iv~~g 270 (363)
T 4dvj_A 248 ------HTDKHAAEIADLIAPQGRFCLID 270 (363)
T ss_dssp ------CHHHHHHHHHHHSCTTCEEEECS
T ss_pred ------CchhhHHHHHHHhcCCCEEEEEC
Confidence 12247888999999999999874
No 330
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=89.18 E-value=0.71 Score=46.03 Aligned_cols=93 Identities=12% Similarity=0.032 Sum_probs=62.9
Q ss_pred CeEEEeCCCC-chHHHHHHhccCcee-EEEEeeCCHHHHHHHHHcCCCeEEEeecc-cCCC-----CCCCCccEEEEccc
Q 012571 218 QSVLDVGCGF-GSFGAHLVSLKLMAV-CVAVYEATGSQVQLALERGLPAMIGNFIS-RQLP-----YPSLSFDMVHCAQC 289 (460)
Q Consensus 218 ~~VLDIGCGt-G~~a~~La~~g~~~~-~v~giD~s~~~l~~A~~rgl~~~~~~~d~-~~Lp-----~~~~sFDlVvs~~~ 289 (460)
.+||-+|+|. |.++..+++... . .|+++|.+++..+.+++.|....+...+. .++. ...+.+|+|+-.-.
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G 274 (376)
T 1e3i_A 197 STCAVFGLGCVGLSAIIGCKIAG--ASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAG 274 (376)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC--CCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECCC
Confidence 7899999863 677777777521 4 78899999999999988786544321110 1110 11236999986531
Q ss_pred cccccccHHHHHHHHHHhcCCC-cEEEEEeC
Q 012571 290 GIIWDKKEGIFLIEADRLLKPG-GYFVLTSP 319 (460)
Q Consensus 290 l~~~~~d~~~~L~ei~RvLkPG-G~lvl~~~ 319 (460)
. ...+.+..+.|++| |.+++...
T Consensus 275 ------~-~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 275 ------T-AQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp ------C-HHHHHHHHHTBCTTTCEEEECCC
T ss_pred ------C-HHHHHHHHHHhhcCCCEEEEECC
Confidence 1 23688899999999 99988764
No 331
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=89.08 E-value=0.53 Score=46.10 Aligned_cols=91 Identities=18% Similarity=0.141 Sum_probs=62.4
Q ss_pred CeEEEeCC--CCchHHHHHHhccCceeEEEEeeCCHHHHHHH-HHcCCCeEEEeecccCCC-----CCCCCccEEEEccc
Q 012571 218 QSVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLA-LERGLPAMIGNFISRQLP-----YPSLSFDMVHCAQC 289 (460)
Q Consensus 218 ~~VLDIGC--GtG~~a~~La~~g~~~~~v~giD~s~~~l~~A-~~rgl~~~~~~~d~~~Lp-----~~~~sFDlVvs~~~ 289 (460)
.+||-+|+ |.|..+..+++... .+|+++|.+++..+.+ ++.|....+... ..++. ...+.+|+|+-+-.
T Consensus 151 ~~vlI~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~g 227 (336)
T 4b7c_A 151 ETVVISGAAGAVGSVAGQIARLKG--CRVVGIAGGAEKCRFLVEELGFDGAIDYK-NEDLAAGLKRECPKGIDVFFDNVG 227 (336)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHTTCCSEEEETT-TSCHHHHHHHHCTTCEEEEEESSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHcCCCEEEECC-CHHHHHHHHHhcCCCceEEEECCC
Confidence 78999998 46777777776522 5889999999999888 666664433211 11100 11346999987532
Q ss_pred cccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 290 GIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 290 l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
...+.+..+.|++||.+++...
T Consensus 228 --------~~~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 228 --------GEILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp --------HHHHHHHHTTEEEEEEEEECCC
T ss_pred --------cchHHHHHHHHhhCCEEEEEee
Confidence 1368889999999999998754
No 332
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=89.07 E-value=0.41 Score=47.24 Aligned_cols=93 Identities=15% Similarity=0.077 Sum_probs=61.4
Q ss_pred CeEEEeCC--CCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCC-----CCCCCccEEEEcccc
Q 012571 218 QSVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP-----YPSLSFDMVHCAQCG 290 (460)
Q Consensus 218 ~~VLDIGC--GtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp-----~~~~sFDlVvs~~~l 290 (460)
.+||-+|+ |.|..+..++.... .+++++|.+++..+.+++.+....+...+..++. ..++.+|+|+.+-.
T Consensus 171 ~~vlV~Ga~ggiG~~~~~~a~~~G--a~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g- 247 (347)
T 2hcy_A 171 HWVAISGAAGGLGSLAVQYAKAMG--YRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSV- 247 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECSS-
T ss_pred CEEEEECCCchHHHHHHHHHHHCC--CcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEECCC-
Confidence 78999998 46777777766422 5788899888888888776655333211111110 01126999987632
Q ss_pred ccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 291 ~~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
....++++.+.|++||.+++...
T Consensus 248 ------~~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 248 ------SEAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp ------CHHHHHHHTTSEEEEEEEEECCC
T ss_pred ------cHHHHHHHHHHHhcCCEEEEEeC
Confidence 12478889999999999988765
No 333
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=89.05 E-value=2.5 Score=41.87 Aligned_cols=102 Identities=10% Similarity=0.045 Sum_probs=62.3
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc---C-----------------------CCeEEEeec
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER---G-----------------------LPAMIGNFI 270 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r---g-----------------------l~~~~~~~d 270 (460)
...|+.+|||..+.+..|...+. ...+.-+|. ++.++.-++. . ....+...|
T Consensus 98 ~~qVV~LGaGlDTr~~RL~~~~~-~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 98 KVQVVNLGCGSDLRMLPLLQMFP-HLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp SEEEEEETCTTCCTHHHHHHHCT-TEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CcEEEEeCCCCccHHHHhcCcCC-CCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 37899999999999999987532 367788888 6555543322 1 234444444
Q ss_pred ccCCC--------C-CCCCccEEEEccccccccc-cHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 271 SRQLP--------Y-PSLSFDMVHCAQCGIIWDK-KEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 271 ~~~Lp--------~-~~~sFDlVvs~~~l~~~~~-d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
..+.. . ..+...++++-.++..+.+ ....+++.+.+.. |||.+++.+...
T Consensus 176 L~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~ 235 (334)
T 1rjd_A 176 LNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIG 235 (334)
T ss_dssp TTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECC
T ss_pred CCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccC
Confidence 43321 1 2244566666554444432 3345777787776 788887776544
No 334
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=88.94 E-value=0.55 Score=46.28 Aligned_cols=93 Identities=16% Similarity=0.194 Sum_probs=62.1
Q ss_pred CeEEEeCCC--CchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCC-----CCCC-CCccEEEEccc
Q 012571 218 QSVLDVGCG--FGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQL-----PYPS-LSFDMVHCAQC 289 (460)
Q Consensus 218 ~~VLDIGCG--tG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~L-----p~~~-~sFDlVvs~~~ 289 (460)
.+||-+|+| .|..+..+++.. ...+++++|.+++..+.+++.+....+...+ .+. .... +.+|+|+.+-.
T Consensus 172 ~~vlV~Gagg~iG~~~~~~a~~~-~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~g 249 (347)
T 1jvb_A 172 KTLLVVGAGGGLGTMAVQIAKAV-SGATIIGVDVREEAVEAAKRAGADYVINASM-QDPLAEIRRITESKGVDAVIDLNN 249 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH-TCCEEEEEESSHHHHHHHHHHTCSEEEETTT-SCHHHHHHHHTTTSCEEEEEESCC
T ss_pred CEEEEECCCccHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHhCCCEEecCCC-ccHHHHHHHHhcCCCceEEEECCC
Confidence 789999987 556666666542 0257899999999999888777554332111 110 0112 47999987632
Q ss_pred cccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 290 GIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 290 l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
....+.+..+.|+|||.+++...
T Consensus 250 -------~~~~~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 250 -------SEKTLSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp -------CHHHHTTGGGGEEEEEEEEECCS
T ss_pred -------CHHHHHHHHHHHhcCCEEEEECC
Confidence 12367888999999999988754
No 335
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=88.88 E-value=2.2 Score=42.06 Aligned_cols=94 Identities=13% Similarity=0.103 Sum_probs=61.8
Q ss_pred CeEEEeCCCC-chHHHHHHhccCceeE-EEEeeCCHHHHHHHHHcCCCeEEEeec---ccCC------CCCCCCccEEEE
Q 012571 218 QSVLDVGCGF-GSFGAHLVSLKLMAVC-VAVYEATGSQVQLALERGLPAMIGNFI---SRQL------PYPSLSFDMVHC 286 (460)
Q Consensus 218 ~~VLDIGCGt-G~~a~~La~~g~~~~~-v~giD~s~~~l~~A~~rgl~~~~~~~d---~~~L------p~~~~sFDlVvs 286 (460)
.+||=+|+|. |.++..+++.-. .. |+++|.+++..+.+++....+.....+ ..++ -.....+|+|+-
T Consensus 181 ~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid 258 (363)
T 3m6i_A 181 DPVLICGAGPIGLITMLCAKAAG--ACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALE 258 (363)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT--CCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcC--CCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEEEE
Confidence 6888899865 777778877622 34 888999999999998773222211111 0000 012357999987
Q ss_pred ccccccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 287 AQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 287 ~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
.-. ....+.+..+.|++||.+++....
T Consensus 259 ~~g-------~~~~~~~~~~~l~~~G~iv~~G~~ 285 (363)
T 3m6i_A 259 CTG-------VESSIAAAIWAVKFGGKVFVIGVG 285 (363)
T ss_dssp CSC-------CHHHHHHHHHHSCTTCEEEECCCC
T ss_pred CCC-------ChHHHHHHHHHhcCCCEEEEEccC
Confidence 531 123678899999999999987653
No 336
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=88.84 E-value=1.8 Score=42.35 Aligned_cols=91 Identities=16% Similarity=0.149 Sum_probs=62.2
Q ss_pred CeEEEeCCC-CchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCC-----CCCCCccEEEEccccc
Q 012571 218 QSVLDVGCG-FGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP-----YPSLSFDMVHCAQCGI 291 (460)
Q Consensus 218 ~~VLDIGCG-tG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp-----~~~~sFDlVvs~~~l~ 291 (460)
.+||-+|+| .|..+..+++... .+++++|.+++.++.+++.|....+ +....++. .. +.+|+|+-+-.
T Consensus 166 ~~VlV~GaG~vG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~lGa~~~~-d~~~~~~~~~~~~~~-~~~d~vid~~g-- 239 (339)
T 1rjw_A 166 EWVAIYGIGGLGHVAVQYAKAMG--LNVVAVDIGDEKLELAKELGADLVV-NPLKEDAAKFMKEKV-GGVHAAVVTAV-- 239 (339)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHTTCSEEE-CTTTSCHHHHHHHHH-SSEEEEEESSC--
T ss_pred CEEEEECCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHCCCCEEe-cCCCccHHHHHHHHh-CCCCEEEECCC--
Confidence 789999986 4777777776522 5889999999999999877765332 11111100 00 46899886531
Q ss_pred cccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 292 IWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 292 ~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
. ...+.+..+.|++||.+++...
T Consensus 240 ----~-~~~~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 240 ----S-KPAFQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp ----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred ----C-HHHHHHHHHHhhcCCEEEEecc
Confidence 1 2367888999999999988754
No 337
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=88.41 E-value=0.72 Score=44.72 Aligned_cols=96 Identities=20% Similarity=0.207 Sum_probs=51.7
Q ss_pred EEEeecccC-CC-CCCCCccEEEEccccc---cc----------------cccHHHHHHHHHHhcCCCcEEEEEeCCCCC
Q 012571 265 MIGNFISRQ-LP-YPSLSFDMVHCAQCGI---IW----------------DKKEGIFLIEADRLLKPGGYFVLTSPESKP 323 (460)
Q Consensus 265 ~~~~~d~~~-Lp-~~~~sFDlVvs~~~l~---~~----------------~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~ 323 (460)
.+..+|..+ +. +++++||+|++.=-.. .+ ......++.++.|+|||||.+++.......
T Consensus 23 ~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d~~~ 102 (297)
T 2zig_A 23 RLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGDVAV 102 (297)
T ss_dssp EEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCEEE
T ss_pred EEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECCCcc
Confidence 344444433 22 4578899999862111 10 011234678999999999999887653210
Q ss_pred -CCCCCchhhhHHHHHHHHHHHHhCeEEEeeecceeeeeecc
Q 012571 324 -RGSSSSRKNKSLLKVMEEFTEKICWSLIAQQDETFIWQKTV 364 (460)
Q Consensus 324 -~~~~~~~e~~~~w~~i~~l~~~~~w~~~~~~~~~~iw~k~~ 364 (460)
....-..........+..+.++.+|.... ..+|.|..
T Consensus 103 ~~~~~g~~~~~~~~~~l~~~~~~~Gf~~~~----~iiW~K~~ 140 (297)
T 2zig_A 103 ARRRFGRHLVFPLHADIQVRCRKLGFDNLN----PIIWHKHT 140 (297)
T ss_dssp ECC----EEEECHHHHHHHHHHHTTCEEEE----EEEEECC-
T ss_pred ccccCCcccccccHHHHHHHHHHcCCeeec----cEEEeCCC
Confidence 00000000011234556667778887643 45898864
No 338
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=88.03 E-value=0.83 Score=44.87 Aligned_cols=93 Identities=15% Similarity=0.113 Sum_probs=65.5
Q ss_pred CeEEEeCCCC-chHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCC------CCCCCccEEEEcccc
Q 012571 218 QSVLDVGCGF-GSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP------YPSLSFDMVHCAQCG 290 (460)
Q Consensus 218 ~~VLDIGCGt-G~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp------~~~~sFDlVvs~~~l 290 (460)
.+||-+|+|. |.++..+++.- -...++++|.+++..+.+++.|....+...+ ++. .....+|+|+-.-.
T Consensus 173 ~~vlv~GaG~vG~~a~qla~~~-g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~--~~~~~v~~~t~g~g~d~v~d~~G- 248 (345)
T 3jv7_A 173 STAVVIGVGGLGHVGIQILRAV-SAARVIAVDLDDDRLALAREVGADAAVKSGA--GAADAIRELTGGQGATAVFDFVG- 248 (345)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-CCCEEEEEESCHHHHHHHHHTTCSEEEECST--THHHHHHHHHGGGCEEEEEESSC-
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcCCCEEEcCCC--cHHHHHHHHhCCCCCeEEEECCC-
Confidence 7899999875 77778887752 1268999999999999999888765443211 110 01236999886531
Q ss_pred ccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 291 ~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
. ...+.+..+.|+|||.+++....
T Consensus 249 -----~-~~~~~~~~~~l~~~G~iv~~G~~ 272 (345)
T 3jv7_A 249 -----A-QSTIDTAQQVVAVDGHISVVGIH 272 (345)
T ss_dssp -----C-HHHHHHHHHHEEEEEEEEECSCC
T ss_pred -----C-HHHHHHHHHHHhcCCEEEEECCC
Confidence 1 23788999999999999988653
No 339
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=87.60 E-value=0.67 Score=45.54 Aligned_cols=92 Identities=18% Similarity=0.162 Sum_probs=61.7
Q ss_pred CeEEEeCCC--CchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCC------CCCCCccEEEEccc
Q 012571 218 QSVLDVGCG--FGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP------YPSLSFDMVHCAQC 289 (460)
Q Consensus 218 ~~VLDIGCG--tG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp------~~~~sFDlVvs~~~ 289 (460)
.+||-+|+| .|..+..+++.. ..+++++|.+++.++.+++.|....+... ..++. .....+|+|+-+-.
T Consensus 146 ~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~-~~~~~~~~~~~~~~~g~Dvvid~~g 222 (340)
T 3gms_A 146 DVLLVNACGSAIGHLFAQLSQIL--NFRLIAVTRNNKHTEELLRLGAAYVIDTS-TAPLYETVMELTNGIGADAAIDSIG 222 (340)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHHHTCSEEEETT-TSCHHHHHHHHTTTSCEEEEEESSC
T ss_pred CEEEEeCCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhCCCcEEEeCC-cccHHHHHHHHhCCCCCcEEEECCC
Confidence 789999987 577887777752 25788999999888888887766444211 11110 12347999987532
Q ss_pred cccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 290 GIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 290 l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
. . .+.+..+.|+|||.+++....
T Consensus 223 ~-------~-~~~~~~~~l~~~G~iv~~G~~ 245 (340)
T 3gms_A 223 G-------P-DGNELAFSLRPNGHFLTIGLL 245 (340)
T ss_dssp H-------H-HHHHHHHTEEEEEEEEECCCT
T ss_pred C-------h-hHHHHHHHhcCCCEEEEEeec
Confidence 1 1 233455899999999988654
No 340
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=87.37 E-value=0.9 Score=44.71 Aligned_cols=83 Identities=19% Similarity=0.273 Sum_probs=48.5
Q ss_pred CCCCCccEEEEccc--cc-----------cccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHH
Q 012571 276 YPSLSFDMVHCAQC--GI-----------IWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEF 342 (460)
Q Consensus 276 ~~~~sFDlVvs~~~--l~-----------~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l 342 (460)
+++++||+|++.=- .. .|.......+.++.|+|||||.+++........+. +......+..+.++
T Consensus 29 l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g~--~~~~~~~~~~i~~~ 106 (323)
T 1boo_A 29 FPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGV--PARSIYNFRVLIRM 106 (323)
T ss_dssp SCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEETTE--EEECCHHHHHHHHH
T ss_pred CCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecCCC--cccccchHHHHHHH
Confidence 45778999988621 11 11123456899999999999999997653210100 00001234445556
Q ss_pred HHHhCeEEEeeecceeeeeecc
Q 012571 343 TEKICWSLIAQQDETFIWQKTV 364 (460)
Q Consensus 343 ~~~~~w~~~~~~~~~~iw~k~~ 364 (460)
.+..+|... +..+|.|..
T Consensus 107 ~~~~Gf~~~----~~iiW~k~~ 124 (323)
T 1boo_A 107 IDEVGFFLA----EDFYWFNPS 124 (323)
T ss_dssp HHTTCCEEE----EEEEEECSS
T ss_pred HHhCCCEEE----EEEEEecCC
Confidence 677888664 345887764
No 341
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=87.33 E-value=1.7 Score=43.08 Aligned_cols=91 Identities=15% Similarity=0.089 Sum_probs=63.8
Q ss_pred CeEEEeC--CCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCC-----CCCCCccEEEEcccc
Q 012571 218 QSVLDVG--CGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP-----YPSLSFDMVHCAQCG 290 (460)
Q Consensus 218 ~~VLDIG--CGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp-----~~~~sFDlVvs~~~l 290 (460)
.+||-+| .|.|..+..+++... .+++++|.+++..+.+++.|....+. .+..++. ...+.+|+|+-+-.
T Consensus 165 ~~VlV~Ga~G~iG~~~~q~a~~~G--a~Vi~~~~~~~~~~~~~~~Ga~~~~~-~~~~~~~~~~~~~~~~g~D~vid~~g- 240 (362)
T 2c0c_A 165 KKVLVTAAAGGTGQFAMQLSKKAK--CHVIGTCSSDEKSAFLKSLGCDRPIN-YKTEPVGTVLKQEYPEGVDVVYESVG- 240 (362)
T ss_dssp CEEEETTTTBTTHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHTTCSEEEE-TTTSCHHHHHHHHCTTCEEEEEECSC-
T ss_pred CEEEEeCCCcHHHHHHHHHHHhCC--CEEEEEECCHHHHHHHHHcCCcEEEe-cCChhHHHHHHHhcCCCCCEEEECCC-
Confidence 7899999 567888888887632 57899999999999998877654332 1111100 11246999987632
Q ss_pred ccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 291 ~~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
. ..+..+.+.|++||.+++...
T Consensus 241 -----~--~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 241 -----G--AMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp -----T--HHHHHHHHHEEEEEEEEECCC
T ss_pred -----H--HHHHHHHHHHhcCCEEEEEeC
Confidence 1 367889999999999988764
No 342
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=87.20 E-value=1.9 Score=46.64 Aligned_cols=100 Identities=19% Similarity=0.130 Sum_probs=59.0
Q ss_pred CeEEEeCCCCchHHHHHHhc-----------cCceeEEEEeeC---CHHHHHHHHHc--------------------C--
Q 012571 218 QSVLDVGCGFGSFGAHLVSL-----------KLMAVCVAVYEA---TGSQVQLALER--------------------G-- 261 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~-----------g~~~~~v~giD~---s~~~l~~A~~r--------------------g-- 261 (460)
-+|||+|-|+|.+.....+. ......++++|. +.+.++.+.+. +
T Consensus 68 ~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 147 (676)
T 3ps9_A 68 FVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCH 147 (676)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEEE
T ss_pred eEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCce
Confidence 58999999999877655443 122367889998 77777644331 0
Q ss_pred --------CCeEEEeeccc----CCCCC-CCCccEEEEcccccccccc--HHHHHHHHHHhcCCCcEEEEE
Q 012571 262 --------LPAMIGNFISR----QLPYP-SLSFDMVHCAQCGIIWDKK--EGIFLIEADRLLKPGGYFVLT 317 (460)
Q Consensus 262 --------l~~~~~~~d~~----~Lp~~-~~sFDlVvs~~~l~~~~~d--~~~~L~ei~RvLkPGG~lvl~ 317 (460)
+...+..+|+. +++.. +..||+++.-...-.-.++ ...++.++.++++|||.+.-.
T Consensus 148 ~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~ 218 (676)
T 3ps9_A 148 RLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATF 218 (676)
T ss_dssp EEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEES
T ss_pred EEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEec
Confidence 11111222221 22211 4679999874211111111 136899999999999997743
No 343
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=87.12 E-value=0.8 Score=45.03 Aligned_cols=92 Identities=14% Similarity=0.165 Sum_probs=63.3
Q ss_pred CeEEEeCC--CCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCC------CCCCCccEEEEccc
Q 012571 218 QSVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP------YPSLSFDMVHCAQC 289 (460)
Q Consensus 218 ~~VLDIGC--GtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp------~~~~sFDlVvs~~~ 289 (460)
.+||-+|+ |.|..+..+++... .+++++|.+++.++.+++.+....+ +....++. .....+|+|+.+-.
T Consensus 168 ~~vlV~Gasg~iG~~~~~~a~~~G--~~Vi~~~~~~~~~~~~~~~ga~~~~-d~~~~~~~~~~~~~~~~~~~d~vi~~~g 244 (343)
T 2eih_A 168 DDVLVMAAGSGVSVAAIQIAKLFG--ARVIATAGSEDKLRRAKALGADETV-NYTHPDWPKEVRRLTGGKGADKVVDHTG 244 (343)
T ss_dssp CEEEECSTTSTTHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHHTCSEEE-ETTSTTHHHHHHHHTTTTCEEEEEESSC
T ss_pred CEEEEECCCchHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHhcCCCEEE-cCCcccHHHHHHHHhCCCCceEEEECCC
Confidence 78999998 67888888877522 5788999999999988877755432 22111100 11247999987642
Q ss_pred cccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 290 GIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 290 l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
. ..+.++.+.|++||.+++....
T Consensus 245 --~------~~~~~~~~~l~~~G~~v~~g~~ 267 (343)
T 2eih_A 245 --A------LYFEGVIKATANGGRIAIAGAS 267 (343)
T ss_dssp --S------SSHHHHHHHEEEEEEEEESSCC
T ss_pred --H------HHHHHHHHhhccCCEEEEEecC
Confidence 1 2467888999999999887653
No 344
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=86.80 E-value=1.1 Score=44.49 Aligned_cols=91 Identities=16% Similarity=0.186 Sum_probs=61.2
Q ss_pred CeEEEeCC--CCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCC------CCCCCccEEEEccc
Q 012571 218 QSVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP------YPSLSFDMVHCAQC 289 (460)
Q Consensus 218 ~~VLDIGC--GtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp------~~~~sFDlVvs~~~ 289 (460)
.+||-+|+ |.|..+..+++... ..++++|.+++..+.+++.+....+. .+..++. ...+.+|+|+.+-.
T Consensus 172 ~~vlV~GasggiG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~~ga~~~~d-~~~~~~~~~~~~~~~~~~~D~vi~~~G 248 (351)
T 1yb5_A 172 ESVLVHGASGGVGLAACQIARAYG--LKILGTAGTEEGQKIVLQNGAHEVFN-HREVNYIDKIKKYVGEKGIDIIIEMLA 248 (351)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHTTCSEEEE-TTSTTHHHHHHHHHCTTCEEEEEESCH
T ss_pred CEEEEECCCChHHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHcCCCEEEe-CCCchHHHHHHHHcCCCCcEEEEECCC
Confidence 78999996 45667777666522 57889999999988887777653332 1111100 11236999987632
Q ss_pred cccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 290 GIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 290 l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
...+.+..+.|+|||.+++...
T Consensus 249 --------~~~~~~~~~~l~~~G~iv~~g~ 270 (351)
T 1yb5_A 249 --------NVNLSKDLSLLSHGGRVIVVGS 270 (351)
T ss_dssp --------HHHHHHHHHHEEEEEEEEECCC
T ss_pred --------hHHHHHHHHhccCCCEEEEEec
Confidence 1256788899999999998764
No 345
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=86.79 E-value=0.87 Score=44.50 Aligned_cols=92 Identities=18% Similarity=0.141 Sum_probs=63.1
Q ss_pred CeEEEeCC--CCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCC------CCCCCccEEEEccc
Q 012571 218 QSVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP------YPSLSFDMVHCAQC 289 (460)
Q Consensus 218 ~~VLDIGC--GtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp------~~~~sFDlVvs~~~ 289 (460)
.+||-+|+ |.|..+..+++.. ..+++++|.+++.++.+++.|....+... ..++. .....+|+|+-+-.
T Consensus 150 ~~vlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~-~~~~~~~~~~~~~~~g~D~vid~~g 226 (334)
T 3qwb_A 150 DYVLLFAAAGGVGLILNQLLKMK--GAHTIAVASTDEKLKIAKEYGAEYLINAS-KEDILRQVLKFTNGKGVDASFDSVG 226 (334)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCSEEEETT-TSCHHHHHHHHTTTSCEEEEEECCG
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCcEEEeCC-CchHHHHHHHHhCCCCceEEEECCC
Confidence 78999994 4577777777652 25789999999999999887755443211 11110 12346999987632
Q ss_pred cccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 290 GIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 290 l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
. ..+....+.|+|||.+++....
T Consensus 227 ~--------~~~~~~~~~l~~~G~iv~~G~~ 249 (334)
T 3qwb_A 227 K--------DTFEISLAALKRKGVFVSFGNA 249 (334)
T ss_dssp G--------GGHHHHHHHEEEEEEEEECCCT
T ss_pred h--------HHHHHHHHHhccCCEEEEEcCC
Confidence 1 2577888999999999987643
No 346
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=86.64 E-value=0.78 Score=44.73 Aligned_cols=93 Identities=13% Similarity=0.027 Sum_probs=63.9
Q ss_pred CeEEEeCC--CCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCC------CCCCCccEEEEccc
Q 012571 218 QSVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP------YPSLSFDMVHCAQC 289 (460)
Q Consensus 218 ~~VLDIGC--GtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp------~~~~sFDlVvs~~~ 289 (460)
.+||-+|+ |.|..+..+++.. ..+++++|.+++.++.+++.|....+... ..++. .....+|+|+-+-.
T Consensus 142 ~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~-~~~~~~~~~~~~~~~g~Dvvid~~g 218 (325)
T 3jyn_A 142 EIILFHAAAGGVGSLACQWAKAL--GAKLIGTVSSPEKAAHAKALGAWETIDYS-HEDVAKRVLELTDGKKCPVVYDGVG 218 (325)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHHHTCSEEEETT-TSCHHHHHHHHTTTCCEEEEEESSC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCCEEEeCC-CccHHHHHHHHhCCCCceEEEECCC
Confidence 78999983 4577777777652 25789999999999999887765443221 11110 12347999987532
Q ss_pred cccccccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012571 290 GIIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 290 l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
. ..+....+.|+|||.+++.....
T Consensus 219 ~--------~~~~~~~~~l~~~G~iv~~g~~~ 242 (325)
T 3jyn_A 219 Q--------DTWLTSLDSVAPRGLVVSFGNAS 242 (325)
T ss_dssp G--------GGHHHHHTTEEEEEEEEECCCTT
T ss_pred h--------HHHHHHHHHhcCCCEEEEEecCC
Confidence 1 25678889999999999886543
No 347
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=86.47 E-value=0.74 Score=44.82 Aligned_cols=91 Identities=15% Similarity=0.054 Sum_probs=61.1
Q ss_pred CeEEEeC--CCCchHHHHHHhc-cCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCC------CCCCCccEEEEcc
Q 012571 218 QSVLDVG--CGFGSFGAHLVSL-KLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP------YPSLSFDMVHCAQ 288 (460)
Q Consensus 218 ~~VLDIG--CGtG~~a~~La~~-g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp------~~~~sFDlVvs~~ 288 (460)
.+||-+| .|.|..+..++.. | .+++++|.+++..+.+++.+....+. ....+.. ...+.+|+|+.+-
T Consensus 142 ~~vlV~Ga~ggiG~~~~~~a~~~G---~~V~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~D~vi~~~ 217 (327)
T 1qor_A 142 EQFLFHAAAGGVGLIACQWAKALG---AKLIGTVGTAQKAQSALKAGAWQVIN-YREEDLVERLKEITGGKKVRVVYDSV 217 (327)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHHT---CEEEEEESSHHHHHHHHHHTCSEEEE-TTTSCHHHHHHHHTTTCCEEEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHcCCCEEEE-CCCccHHHHHHHHhCCCCceEEEECC
Confidence 7899999 3556666666654 4 57889999999888887766554332 1111100 1134699998763
Q ss_pred ccccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 289 CGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 289 ~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
. ...+.++.+.|++||.+++....
T Consensus 218 g--------~~~~~~~~~~l~~~G~iv~~g~~ 241 (327)
T 1qor_A 218 G--------RDTWERSLDCLQRRGLMVSFGNS 241 (327)
T ss_dssp C--------GGGHHHHHHTEEEEEEEEECCCT
T ss_pred c--------hHHHHHHHHHhcCCCEEEEEecC
Confidence 2 12577889999999999887643
No 348
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=86.06 E-value=2.4 Score=42.75 Aligned_cols=95 Identities=15% Similarity=0.118 Sum_probs=60.6
Q ss_pred CeEEEeCCCC-chHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCC------CCCCCccEEEEcccc
Q 012571 218 QSVLDVGCGF-GSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP------YPSLSFDMVHCAQCG 290 (460)
Q Consensus 218 ~~VLDIGCGt-G~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp------~~~~sFDlVvs~~~l 290 (460)
.+||=+|+|. |.++..+++.-. ...|+++|.+++..+.+++.|....+... ..++. .....+|+|+-.-.
T Consensus 215 ~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~~lGa~~vi~~~-~~~~~~~i~~~t~g~g~D~vid~~g- 291 (404)
T 3ip1_A 215 DNVVILGGGPIGLAAVAILKHAG-ASKVILSEPSEVRRNLAKELGADHVIDPT-KENFVEAVLDYTNGLGAKLFLEATG- 291 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHTCSEEECTT-TSCHHHHHHHHTTTCCCSEEEECSS-
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHcCCCEEEcCC-CCCHHHHHHHHhCCCCCCEEEECCC-
Confidence 6888899864 667777776521 12789999999999999888865443211 11110 12346999986531
Q ss_pred ccccccHHHHHHHHHHhc----CCCcEEEEEeCC
Q 012571 291 IIWDKKEGIFLIEADRLL----KPGGYFVLTSPE 320 (460)
Q Consensus 291 ~~~~~d~~~~L~ei~RvL----kPGG~lvl~~~~ 320 (460)
.....+..+.+.| ++||.+++....
T Consensus 292 -----~~~~~~~~~~~~l~~~~~~~G~iv~~G~~ 320 (404)
T 3ip1_A 292 -----VPQLVWPQIEEVIWRARGINATVAIVARA 320 (404)
T ss_dssp -----CHHHHHHHHHHHHHHCSCCCCEEEECSCC
T ss_pred -----CcHHHHHHHHHHHHhccCCCcEEEEeCCC
Confidence 2222344444555 999999987654
No 349
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=86.04 E-value=0.41 Score=46.49 Aligned_cols=86 Identities=17% Similarity=0.147 Sum_probs=59.5
Q ss_pred CeEEEeCCC-CchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEcccccccccc
Q 012571 218 QSVLDVGCG-FGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKK 296 (460)
Q Consensus 218 ~~VLDIGCG-tG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~d 296 (460)
.+||=+|+| .|.++..+++... .++++++ +++..+.+++.|....+. |.+++ .+.+|+|+-.-. .
T Consensus 144 ~~VlV~GaG~vG~~a~qlak~~G--a~Vi~~~-~~~~~~~~~~lGa~~v~~--d~~~v---~~g~Dvv~d~~g--~---- 209 (315)
T 3goh_A 144 REVLIVGFGAVNNLLTQMLNNAG--YVVDLVS-ASLSQALAAKRGVRHLYR--EPSQV---TQKYFAIFDAVN--S---- 209 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT--CEEEEEC-SSCCHHHHHHHTEEEEES--SGGGC---CSCEEEEECC---------
T ss_pred CEEEEECCCHHHHHHHHHHHHcC--CEEEEEE-ChhhHHHHHHcCCCEEEc--CHHHh---CCCccEEEECCC--c----
Confidence 789999986 4778888877622 5788999 888888998877654442 23344 567999986421 1
Q ss_pred HHHHHHHHHHhcCCCcEEEEEeC
Q 012571 297 EGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 297 ~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
..+.+..+.|+|||.++....
T Consensus 210 --~~~~~~~~~l~~~G~~v~~g~ 230 (315)
T 3goh_A 210 --QNAAALVPSLKANGHIICIQD 230 (315)
T ss_dssp ------TTGGGEEEEEEEEEECC
T ss_pred --hhHHHHHHHhcCCCEEEEEeC
Confidence 123567899999999998853
No 350
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=85.72 E-value=0.32 Score=48.36 Aligned_cols=94 Identities=21% Similarity=0.228 Sum_probs=61.3
Q ss_pred CeEEEeCCCC-chHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCC--CCCCCCccEEEEcccccccc
Q 012571 218 QSVLDVGCGF-GSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQL--PYPSLSFDMVHCAQCGIIWD 294 (460)
Q Consensus 218 ~~VLDIGCGt-G~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~L--p~~~~sFDlVvs~~~l~~~~ 294 (460)
.+||-+|+|. |.++..+++.. ..+|+++|.+++.++.+++.|....+...+..++ ... +.+|+|+-.-...
T Consensus 181 ~~VlV~GaG~vG~~~~qlak~~--Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~-~~~D~vid~~g~~--- 254 (360)
T 1piw_A 181 KKVGIVGLGGIGSMGTLISKAM--GAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYF-DTFDLIVVCASSL--- 254 (360)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSC-SCEEEEEECCSCS---
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhh-cCCCEEEECCCCC---
Confidence 7899999853 67777777652 2468999999888888888776544432111010 011 4799998763210
Q ss_pred ccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 295 KKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 295 ~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
. ...+.+..+.|+|||.++....
T Consensus 255 ~--~~~~~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 255 T--DIDFNIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp T--TCCTTTGGGGEEEEEEEEECCC
T ss_pred c--HHHHHHHHHHhcCCCEEEEecC
Confidence 0 1135567889999999988754
No 351
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=85.54 E-value=0.78 Score=49.81 Aligned_cols=100 Identities=16% Similarity=0.062 Sum_probs=58.8
Q ss_pred CCeEEEeCCCCchHHHHHHhcc-----------CceeEEEEeeC---CHHHHHHHHHc--------------------C-
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLK-----------LMAVCVAVYEA---TGSQVQLALER--------------------G- 261 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g-----------~~~~~v~giD~---s~~~l~~A~~r--------------------g- 261 (460)
.-+|+|+|.|+|.....+.+.. .....++.+|. +.+.+..+.+. |
T Consensus 59 ~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 138 (689)
T 3pvc_A 59 SCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGC 138 (689)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEE
T ss_pred ceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCc
Confidence 3689999999999776665531 12367888888 66666544321 1
Q ss_pred ---------CCeEEEeeccc----CCCC-CCCCccEEEEcccccccccc--HHHHHHHHHHhcCCCcEEEE
Q 012571 262 ---------LPAMIGNFISR----QLPY-PSLSFDMVHCAQCGIIWDKK--EGIFLIEADRLLKPGGYFVL 316 (460)
Q Consensus 262 ---------l~~~~~~~d~~----~Lp~-~~~sFDlVvs~~~l~~~~~d--~~~~L~ei~RvLkPGG~lvl 316 (460)
+...+..+|+. +++. .++.||+++.-...-.-.++ ...++.++.++++|||.+.-
T Consensus 139 ~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 209 (689)
T 3pvc_A 139 HRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFST 209 (689)
T ss_dssp EEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEE
T ss_pred eEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 11222223332 2221 14679999874211111111 14689999999999998764
No 352
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=85.26 E-value=3.2 Score=40.50 Aligned_cols=94 Identities=16% Similarity=0.115 Sum_probs=61.1
Q ss_pred CeEEEeCCCCc-hHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecc------cCCCCCCCCccEEEEcccc
Q 012571 218 QSVLDVGCGFG-SFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFIS------RQLPYPSLSFDMVHCAQCG 290 (460)
Q Consensus 218 ~~VLDIGCGtG-~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~------~~Lp~~~~sFDlVvs~~~l 290 (460)
.+||=+|+|.+ .++..+++. ....+|+++|.+++-.+.+++.|....+...+. .++ .....+|.++..-
T Consensus 165 ~~VlV~GaG~~g~~a~~~a~~-~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~-t~g~g~d~~~~~~-- 240 (348)
T 4eez_A 165 DWQVIFGAGGLGNLAIQYAKN-VFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKI-TGGLGVQSAIVCA-- 240 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHH-TTSSCEEEEEECC--
T ss_pred CEEEEEcCCCccHHHHHHHHH-hCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhh-cCCCCceEEEEec--
Confidence 78999999864 455555543 122689999999999999988887655432211 011 1223466665432
Q ss_pred ccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 291 ~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
-....+....+.|++||.+++....
T Consensus 241 -----~~~~~~~~~~~~l~~~G~~v~~g~~ 265 (348)
T 4eez_A 241 -----VARIAFEQAVASLKPMGKMVAVAVP 265 (348)
T ss_dssp -----SCHHHHHHHHHTEEEEEEEEECCCC
T ss_pred -----cCcchhheeheeecCCceEEEEecc
Confidence 1134788899999999999887643
No 353
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=85.13 E-value=1.4 Score=42.70 Aligned_cols=92 Identities=15% Similarity=0.056 Sum_probs=64.6
Q ss_pred eEEEeCC--CCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCC-CCCCCCccEEEEccccccccc
Q 012571 219 SVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQL-PYPSLSFDMVHCAQCGIIWDK 295 (460)
Q Consensus 219 ~VLDIGC--GtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~L-p~~~~sFDlVvs~~~l~~~~~ 295 (460)
+||=+|+ |.|..+..+++... .++++++.+++..+.+++.|....+...+.... ....+.+|+|+-.-.
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~G--a~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~g------ 220 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLG--YQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVG------ 220 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT--CCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESSC------
T ss_pred eEEEECCCcHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECCC------
Confidence 4999986 56888888887632 578999999999999988886655432221111 123457998875421
Q ss_pred cHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 296 KEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 296 d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
...+.+..+.|+|||.++.....
T Consensus 221 --~~~~~~~~~~l~~~G~iv~~G~~ 243 (324)
T 3nx4_A 221 --DKVLAKVLAQMNYGGCVAACGLA 243 (324)
T ss_dssp --HHHHHHHHHTEEEEEEEEECCCT
T ss_pred --cHHHHHHHHHHhcCCEEEEEecC
Confidence 12788999999999999987653
No 354
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=84.88 E-value=1.3 Score=43.52 Aligned_cols=92 Identities=21% Similarity=0.171 Sum_probs=62.0
Q ss_pred CeEEEeCCCC-chHHHHHHhccCcee-EEEEeeCCHHHHHHHHHcCCCeEEEeecccCCC------CCCCCccEEEEccc
Q 012571 218 QSVLDVGCGF-GSFGAHLVSLKLMAV-CVAVYEATGSQVQLALERGLPAMIGNFISRQLP------YPSLSFDMVHCAQC 289 (460)
Q Consensus 218 ~~VLDIGCGt-G~~a~~La~~g~~~~-~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp------~~~~sFDlVvs~~~ 289 (460)
.+||-+|+|. |..+..+++.. .. +++++|.+++..+.+++.|....+. .+..++. .....+|+|+-.-.
T Consensus 169 ~~VlV~GaG~vG~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~-~~~~~~~~~v~~~~~g~g~D~vid~~g 245 (348)
T 2d8a_A 169 KSVLITGAGPLGLLGIAVAKAS--GAYPVIVSEPSDFRRELAKKVGADYVIN-PFEEDVVKEVMDITDGNGVDVFLEFSG 245 (348)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCCSEEEECSCHHHHHHHHHHTCSEEEC-TTTSCHHHHHHHHTTTSCEEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHhCCCEEEC-CCCcCHHHHHHHHcCCCCCCEEEECCC
Confidence 6899999863 66777777652 14 6889999999999998877654332 1111110 11236999987532
Q ss_pred cccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 290 GIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 290 l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
. ...+.++.+.|++||.++....
T Consensus 246 ------~-~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 246 ------A-PKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp ------C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred ------C-HHHHHHHHHHHhcCCEEEEEcc
Confidence 1 2367888999999999988764
No 355
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=84.61 E-value=0.98 Score=43.46 Aligned_cols=91 Identities=18% Similarity=0.115 Sum_probs=59.8
Q ss_pred CeEEEeCC--CCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEccccccccc
Q 012571 218 QSVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDK 295 (460)
Q Consensus 218 ~~VLDIGC--GtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~ 295 (460)
.+||-+|+ |.|..+..+++... .+++++|.+++..+.+++.|....+...+..++.-.-+.+|+|+. -..
T Consensus 127 ~~vlV~Ga~G~vG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g~----- 198 (302)
T 1iz0_A 127 EKVLVQAAAGALGTAAVQVARAMG--LRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VRG----- 198 (302)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTT--CEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CSC-----
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CCH-----
Confidence 78999997 45777777776522 578999999988888877776543321110111000056999986 321
Q ss_pred cHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 296 KEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 296 d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
..+.+..+.|++||.++....
T Consensus 199 ---~~~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 199 ---KEVEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp ---TTHHHHHTTEEEEEEEEEC--
T ss_pred ---HHHHHHHHhhccCCEEEEEeC
Confidence 256788899999999987654
No 356
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=84.23 E-value=1.6 Score=42.51 Aligned_cols=92 Identities=16% Similarity=0.085 Sum_probs=62.0
Q ss_pred CeEEEeCC--CCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCC------CCCCCccEEEEccc
Q 012571 218 QSVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP------YPSLSFDMVHCAQC 289 (460)
Q Consensus 218 ~~VLDIGC--GtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp------~~~~sFDlVvs~~~ 289 (460)
.+||-+|+ |.|..+..++.... .+++++|.+++..+.+++.+....+. ....+.. .....+|+|+.+-.
T Consensus 147 ~~vlV~Ga~ggiG~~~~~~a~~~G--~~Vi~~~~~~~~~~~~~~~g~~~~~d-~~~~~~~~~i~~~~~~~~~d~vi~~~g 223 (333)
T 1wly_A 147 DYVLIHAAAGGMGHIMVPWARHLG--ATVIGTVSTEEKAETARKLGCHHTIN-YSTQDFAEVVREITGGKGVDVVYDSIG 223 (333)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHHTCSEEEE-TTTSCHHHHHHHHHTTCCEEEEEECSC
T ss_pred CEEEEECCccHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHcCCCEEEE-CCCHHHHHHHHHHhCCCCCeEEEECCc
Confidence 78999994 67777777776522 57899999998888887766553332 1111100 11246999987632
Q ss_pred cccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 290 GIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 290 l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
. ..+.+..+.|++||.++.....
T Consensus 224 ~--------~~~~~~~~~l~~~G~iv~~g~~ 246 (333)
T 1wly_A 224 K--------DTLQKSLDCLRPRGMCAAYGHA 246 (333)
T ss_dssp T--------TTHHHHHHTEEEEEEEEECCCT
T ss_pred H--------HHHHHHHHhhccCCEEEEEecC
Confidence 1 2577888999999999887643
No 357
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=83.67 E-value=1.3 Score=43.71 Aligned_cols=92 Identities=16% Similarity=0.148 Sum_probs=61.0
Q ss_pred CeEEEeCC--CCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCC------CCCCCCccEEEEccc
Q 012571 218 QSVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQL------PYPSLSFDMVHCAQC 289 (460)
Q Consensus 218 ~~VLDIGC--GtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~L------p~~~~sFDlVvs~~~ 289 (460)
.+||-+|+ |.|..+..++.... .+++++|.+++.++.+++.+....+. .+..+. -...+.+|+|+-+-.
T Consensus 164 ~~vlV~Ga~ggiG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~d~vi~~~G 240 (354)
T 2j8z_A 164 DYVLIHAGLSGVGTAAIQLTRMAG--AIPLVTAGSQKKLQMAEKLGAAAGFN-YKKEDFSEATLKFTKGAGVNLILDCIG 240 (354)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHTCSEEEE-TTTSCHHHHHHHHTTTSCEEEEEESSC
T ss_pred CEEEEECCccHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHcCCcEEEe-cCChHHHHHHHHHhcCCCceEEEECCC
Confidence 78999984 45667766666522 57889999999998887777654332 111110 012246999987642
Q ss_pred cccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 290 GIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 290 l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
. ..+.+..+.|++||.+++....
T Consensus 241 ~--------~~~~~~~~~l~~~G~iv~~G~~ 263 (354)
T 2j8z_A 241 G--------SYWEKNVNCLALDGRWVLYGLM 263 (354)
T ss_dssp G--------GGHHHHHHHEEEEEEEEECCCT
T ss_pred c--------hHHHHHHHhccCCCEEEEEecc
Confidence 1 1467788999999999987653
No 358
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=83.43 E-value=1.3 Score=43.61 Aligned_cols=90 Identities=17% Similarity=0.152 Sum_probs=61.3
Q ss_pred CeEEEeCC--CCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCC------CCCCCccEEEEccc
Q 012571 218 QSVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP------YPSLSFDMVHCAQC 289 (460)
Q Consensus 218 ~~VLDIGC--GtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp------~~~~sFDlVvs~~~ 289 (460)
.+||=+|+ |.|..+..+++... .++++++.+++..+.+++.|....+. .+ .++. .....+|+|+-+-.
T Consensus 161 ~~VlV~Gasg~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~~ga~~v~~-~~-~~~~~~v~~~~~~~g~Dvvid~~g 236 (342)
T 4eye_A 161 ETVLVLGAAGGIGTAAIQIAKGMG--AKVIAVVNRTAATEFVKSVGADIVLP-LE-EGWAKAVREATGGAGVDMVVDPIG 236 (342)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSGGGHHHHHHHTCSEEEE-SS-TTHHHHHHHHTTTSCEEEEEESCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHhcCCcEEec-Cc-hhHHHHHHHHhCCCCceEEEECCc
Confidence 78999997 45778877777622 57899999998888888877654432 11 1110 12336999987532
Q ss_pred cccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 290 GIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 290 l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
. ..+.+..+.|++||.+++...
T Consensus 237 ~--------~~~~~~~~~l~~~G~iv~~G~ 258 (342)
T 4eye_A 237 G--------PAFDDAVRTLASEGRLLVVGF 258 (342)
T ss_dssp ----------CHHHHHHTEEEEEEEEEC--
T ss_pred h--------hHHHHHHHhhcCCCEEEEEEc
Confidence 1 156788899999999998754
No 359
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=82.94 E-value=1.8 Score=42.72 Aligned_cols=91 Identities=16% Similarity=0.112 Sum_probs=60.4
Q ss_pred CeEEEeCCC-CchHH-HHHH-hccCceeE-EEEeeCCHH---HHHHHHHcCCCeEEEeecccCCC----CCCCCccEEEE
Q 012571 218 QSVLDVGCG-FGSFG-AHLV-SLKLMAVC-VAVYEATGS---QVQLALERGLPAMIGNFISRQLP----YPSLSFDMVHC 286 (460)
Q Consensus 218 ~~VLDIGCG-tG~~a-~~La-~~g~~~~~-v~giD~s~~---~l~~A~~rgl~~~~~~~d~~~Lp----~~~~sFDlVvs 286 (460)
.+||=+|+| .|.++ ..++ +.. ..+ |+++|.+++ ..+.+++.|.... +....++. . .+.||+|+-
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~--Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v--~~~~~~~~~i~~~-~gg~Dvvid 248 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK--GYENLYCLGRRDRPDPTIDIIEELDATYV--DSRQTPVEDVPDV-YEQMDFIYE 248 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT--CCCEEEEEECCCSSCHHHHHHHHTTCEEE--ETTTSCGGGHHHH-SCCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc--CCcEEEEEeCCcccHHHHHHHHHcCCccc--CCCccCHHHHHHh-CCCCCEEEE
Confidence 689999975 36677 7777 542 234 889999887 8888887775332 22111110 1 236899986
Q ss_pred ccccccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 287 AQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 287 ~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
.-. . ...+.+..+.|+|||.++.....
T Consensus 249 ~~g------~-~~~~~~~~~~l~~~G~iv~~g~~ 275 (357)
T 2b5w_A 249 ATG------F-PKHAIQSVQALAPNGVGALLGVP 275 (357)
T ss_dssp CSC------C-HHHHHHHHHHEEEEEEEEECCCC
T ss_pred CCC------C-hHHHHHHHHHHhcCCEEEEEeCC
Confidence 531 1 23678899999999999987654
No 360
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=82.93 E-value=1.8 Score=43.31 Aligned_cols=95 Identities=22% Similarity=0.306 Sum_probs=63.2
Q ss_pred CeEEEeCCC-CchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEee---cc---cCCC--CCCCCccEEEEcc
Q 012571 218 QSVLDVGCG-FGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNF---IS---RQLP--YPSLSFDMVHCAQ 288 (460)
Q Consensus 218 ~~VLDIGCG-tG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~---d~---~~Lp--~~~~sFDlVvs~~ 288 (460)
.+||-+|+| .|.++..+++... ..+|+++|.+++..+.+++.|....+..- +. +.+. .....+|+|+-.-
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvid~~ 275 (380)
T 1vj0_A 197 KTVVIQGAGPLGLFGVVIARSLG-AENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEAT 275 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-BSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHcC-CceEEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCCCcEEEECC
Confidence 789999966 3677777776521 14789999999999999887765443211 00 0010 1223699998653
Q ss_pred ccccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 289 CGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 289 ~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
. . ...+.+..+.|+|||.+++....
T Consensus 276 g---~----~~~~~~~~~~l~~~G~iv~~G~~ 300 (380)
T 1vj0_A 276 G---D----SRALLEGSELLRRGGFYSVAGVA 300 (380)
T ss_dssp S---C----TTHHHHHHHHEEEEEEEEECCCC
T ss_pred C---C----HHHHHHHHHHHhcCCEEEEEecC
Confidence 1 1 12677889999999999887653
No 361
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=82.71 E-value=2.4 Score=41.60 Aligned_cols=90 Identities=14% Similarity=0.245 Sum_probs=61.1
Q ss_pred CeEEEeC-CC-CchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeec-----ccCCCCCCCCccEEEEcccc
Q 012571 218 QSVLDVG-CG-FGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFI-----SRQLPYPSLSFDMVHCAQCG 290 (460)
Q Consensus 218 ~~VLDIG-CG-tG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d-----~~~Lp~~~~sFDlVvs~~~l 290 (460)
.+||=+| +| .|..+..+++.. ..+++++|.+++.++.+++.|....+..-+ ..+ ...+.+|+|+-.-
T Consensus 152 ~~VlV~gg~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~--~~~~g~Dvv~d~~-- 225 (346)
T 3fbg_A 152 KTLLIINGAGGVGSIATQIAKAY--GLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKT--QGIELVDYVFCTF-- 225 (346)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT--TCEEEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHH--HTCCCEEEEEESS--
T ss_pred CEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHH--hCCCCccEEEECC--
Confidence 7899884 43 477777777652 258999999999999998887654432110 001 1234699988652
Q ss_pred ccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012571 291 IIWDKKEGIFLIEADRLLKPGGYFVLTS 318 (460)
Q Consensus 291 ~~~~~d~~~~L~ei~RvLkPGG~lvl~~ 318 (460)
.....+..+.+.|+|||.++...
T Consensus 226 -----g~~~~~~~~~~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 226 -----NTDMYYDDMIQLVKPRGHIATIV 248 (346)
T ss_dssp -----CHHHHHHHHHHHEEEEEEEEESS
T ss_pred -----CchHHHHHHHHHhccCCEEEEEC
Confidence 12346788899999999997654
No 362
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=82.65 E-value=1.8 Score=44.09 Aligned_cols=44 Identities=20% Similarity=0.136 Sum_probs=34.9
Q ss_pred CCCeEEEeCCCCchHHHHHH-hccCceeEEEEeeCCHHHHHHHHH
Q 012571 216 GVQSVLDVGCGFGSFGAHLV-SLKLMAVCVAVYEATGSQVQLALE 259 (460)
Q Consensus 216 ~~~~VLDIGCGtG~~a~~La-~~g~~~~~v~giD~s~~~l~~A~~ 259 (460)
+...|+|||++.|.++..++ ..+....+|+++|+++...+..++
T Consensus 226 ~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~ 270 (409)
T 2py6_A 226 DSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQN 270 (409)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHH
T ss_pred CCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHH
Confidence 34799999999999999888 444333689999999998776544
No 363
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=81.38 E-value=9.9 Score=36.75 Aligned_cols=126 Identities=10% Similarity=0.037 Sum_probs=74.3
Q ss_pred eEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCC-CCCccEEEEccccccc----
Q 012571 219 SVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYP-SLSFDMVHCAQCGIIW---- 293 (460)
Q Consensus 219 ~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~-~~sFDlVvs~~~l~~~---- 293 (460)
+|||+=||.|.+...|.+.|.. .+.++|+++...+.-+.+. +..+...|+.++... -..+|+++...--..+
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~--~v~a~e~d~~a~~ty~~N~-~~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~fS~ag 78 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFR--IICANEYDKSIWKTYESNH-SAKLIKGDISKISSDEFPKCDGIIGGPPSQSWSEGG 78 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCE--EEEEEECCTTTHHHHHHHC-CSEEEESCGGGCCGGGSCCCSEEECCCCGGGTEETT
T ss_pred eEEEeCcCccHHHHHHHHCCCE--EEEEEeCCHHHHHHHHHHC-CCCcccCChhhCCHhhCCcccEEEecCCCCCcCCCC
Confidence 6999999999999999888863 4678999988777654442 334455566555421 1358999875211111
Q ss_pred ----cccH-HHHHHHH---HHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEEEee
Q 012571 294 ----DKKE-GIFLIEA---DRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQ 353 (460)
Q Consensus 294 ----~~d~-~~~L~ei---~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~~~~ 353 (460)
.+|. ..++.++ .+.+||- +++.+........ .....+..+....+++++.+...
T Consensus 79 ~~~g~~d~R~~L~~~~~r~i~~~~Pk--~~~~ENV~gl~~~----~~~~~~~~i~~~l~~~GY~v~~~ 140 (331)
T 3ubt_Y 79 SLRGIDDPRGKLFYEYIRILKQKKPI--FFLAENVKGMMAQ----RHNKAVQEFIQEFDNAGYDVHII 140 (331)
T ss_dssp EECCTTCGGGHHHHHHHHHHHHHCCS--EEEEEECCGGGGC----TTSHHHHHHHHHHHHHTEEEEEE
T ss_pred CccCCCCchhHHHHHHHHHHhccCCe--EEEeeeecccccc----cccchhhhhhhhhccCCcEEEEE
Confidence 1233 2455444 4456885 4455544332211 22345666666667777766444
No 364
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=81.37 E-value=3.5 Score=40.44 Aligned_cols=54 Identities=17% Similarity=0.084 Sum_probs=43.1
Q ss_pred HHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc
Q 012571 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER 260 (460)
Q Consensus 195 ~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r 260 (460)
...+.+.+... ..+ ..|||.-||+|+.+....+.| ..++|+|+++...+.+++|
T Consensus 240 ~l~~~~i~~~~-~~~--------~~VlDpF~GsGtt~~aa~~~g---r~~ig~e~~~~~~~~~~~r 293 (323)
T 1boo_A 240 KLPEFFIRMLT-EPD--------DLVVDIFGGSNTTGLVAERES---RKWISFEMKPEYVAASAFR 293 (323)
T ss_dssp HHHHHHHHHHC-CTT--------CEEEETTCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHGG
T ss_pred HHHHHHHHHhC-CCC--------CEEEECCCCCCHHHHHHHHcC---CCEEEEeCCHHHHHHHHHH
Confidence 45555555543 233 689999999999998888776 5889999999999999887
No 365
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=81.05 E-value=17 Score=35.35 Aligned_cols=99 Identities=10% Similarity=0.020 Sum_probs=60.5
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHc--------CCCeEEEeecccCCC---------CCCC
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER--------GLPAMIGNFISRQLP---------YPSL 279 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r--------gl~~~~~~~d~~~Lp---------~~~~ 279 (460)
++.|+++|||.=..+..+.. .....+.-+| .+..++..++. .-...+...|..+ . +..+
T Consensus 103 ~~QvV~LGaGlDTra~Rl~~--~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~ 178 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLDW--PTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPS 178 (310)
T ss_dssp CCEEEEETCTTCCHHHHSCC--CTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTT
T ss_pred CCeEEEeCCCCCchhhhccC--CCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCC
Confidence 46799999999988777752 2225777888 57777655433 1123344444433 2 1112
Q ss_pred CccEEEEccccccccc--cHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 280 SFDMVHCAQCGIIWDK--KEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 280 sFDlVvs~~~l~~~~~--d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
.- +++...++.++.+ +...+++.+...+.||+++++....
T Consensus 179 ~P-t~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~ 220 (310)
T 2uyo_A 179 AR-TAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSP 220 (310)
T ss_dssp SC-EEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCC
T ss_pred CC-EEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecC
Confidence 22 4444444555532 3346888888888999998887654
No 366
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=80.29 E-value=2.1 Score=41.50 Aligned_cols=91 Identities=13% Similarity=0.143 Sum_probs=60.2
Q ss_pred eEEEeCC--CCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecc--cCC-CCCCCCccEEEEccccccc
Q 012571 219 SVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFIS--RQL-PYPSLSFDMVHCAQCGIIW 293 (460)
Q Consensus 219 ~VLDIGC--GtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~--~~L-p~~~~sFDlVvs~~~l~~~ 293 (460)
+||-+|+ |.|..+..+++... .++++++.+++..+.+++.|....+..-+. ..+ ....+.+|+|+-+-.
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~G--a~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g---- 225 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRG--YTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVG---- 225 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT--CCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECST----
T ss_pred eEEEecCCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECCc----
Confidence 7999997 56778888877522 468888988888888887776543321111 001 122346999886532
Q ss_pred cccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 294 DKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 294 ~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
. ..+.+..+.|++||.+++...
T Consensus 226 --~--~~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 226 --G--RTLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp --T--TTHHHHHHTEEEEEEEEECSC
T ss_pred --H--HHHHHHHHhhccCCEEEEEee
Confidence 1 146788899999999998754
No 367
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=79.73 E-value=2 Score=42.43 Aligned_cols=92 Identities=15% Similarity=0.095 Sum_probs=62.3
Q ss_pred CeEEEeC--CCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCC-----CCCCCccEEEEcccc
Q 012571 218 QSVLDVG--CGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP-----YPSLSFDMVHCAQCG 290 (460)
Q Consensus 218 ~~VLDIG--CGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp-----~~~~sFDlVvs~~~l 290 (460)
.+||-+| .|.|..+..+++... .+|+++|.+++..+.+++.|....+... ..++. ...+.+|+|+-+-..
T Consensus 169 ~~VlV~Gg~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~lGa~~~~~~~-~~~~~~~~~~~~~~g~Dvvid~~g~ 245 (353)
T 4dup_A 169 ESVLIHGGTSGIGTTAIQLARAFG--AEVYATAGSTGKCEACERLGAKRGINYR-SEDFAAVIKAETGQGVDIILDMIGA 245 (353)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHHTCSEEEETT-TSCHHHHHHHHHSSCEEEEEESCCG
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHhcCCCEEEeCC-chHHHHHHHHHhCCCceEEEECCCH
Confidence 7899995 345777777776522 5799999999999999887765443211 11100 013469999876321
Q ss_pred ccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 291 ~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
..+.+..+.|++||.+++....
T Consensus 246 --------~~~~~~~~~l~~~G~iv~~g~~ 267 (353)
T 4dup_A 246 --------AYFERNIASLAKDGCLSIIAFL 267 (353)
T ss_dssp --------GGHHHHHHTEEEEEEEEECCCT
T ss_pred --------HHHHHHHHHhccCCEEEEEEec
Confidence 1567788999999999987643
No 368
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=79.69 E-value=2 Score=41.82 Aligned_cols=91 Identities=14% Similarity=0.104 Sum_probs=61.3
Q ss_pred eEEEeCC--CCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecc--cCC-CCCCCCccEEEEccccccc
Q 012571 219 SVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFIS--RQL-PYPSLSFDMVHCAQCGIIW 293 (460)
Q Consensus 219 ~VLDIGC--GtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~--~~L-p~~~~sFDlVvs~~~l~~~ 293 (460)
+||=+|+ |.|..+..+++... .++++++.+++..+.+++.|....+..-+. ..+ ....+.+|+|+-.-.
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~G--a~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~g---- 226 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRG--YDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVG---- 226 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHT--CCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCC----
T ss_pred eEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECCc----
Confidence 7999997 46777777776522 468888888878888887776544432111 111 122346999886531
Q ss_pred cccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 294 DKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 294 ~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
. ..+.+..+.|++||.+++...
T Consensus 227 --~--~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 227 --G--KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp --T--HHHHHHHTTEEEEEEEEECCC
T ss_pred --H--HHHHHHHHhhcCCCEEEEEec
Confidence 1 267888999999999998764
No 369
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=78.99 E-value=10 Score=38.05 Aligned_cols=95 Identities=21% Similarity=0.179 Sum_probs=60.5
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEccccccccccH
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKKE 297 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~d~ 297 (460)
.+||.++-+.|.++..+... ..+..+.-|....+..+.+|....... .+..+...||+|+.-.--.--....
T Consensus 47 ~~~l~~n~~~g~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~~d~v~~~~Pk~k~~~~~ 118 (381)
T 3dmg_A 47 ERALDLNPGVGWGSLPLEGR----MAVERLETSRAAFRCLTASGLQARLAL----PWEAAAGAYDLVVLALPAGRGTAYV 118 (381)
T ss_dssp SEEEESSCTTSTTTGGGBTT----BEEEEEECBHHHHHHHHHTTCCCEECC----GGGSCTTCEEEEEEECCGGGCHHHH
T ss_pred CcEEEecCCCCccccccCCC----CceEEEeCcHHHHHHHHHcCCCccccC----CccCCcCCCCEEEEECCcchhHHHH
Confidence 58999999999877666533 345555556555555556677664311 1222456799988642100000123
Q ss_pred HHHHHHHHHhcCCCcEEEEEeCC
Q 012571 298 GIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 298 ~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
...|.++.+.|+|||.+++....
T Consensus 119 ~~~l~~~~~~l~~g~~i~~~g~~ 141 (381)
T 3dmg_A 119 QASLVAAARALRMGGRLYLAGDK 141 (381)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEG
T ss_pred HHHHHHHHHhCCCCCEEEEEEcc
Confidence 56788999999999999998853
No 370
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=78.60 E-value=7.2 Score=37.86 Aligned_cols=93 Identities=13% Similarity=0.076 Sum_probs=62.3
Q ss_pred CeEEEeCCCC-chHHHHHHhc-cCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCC------CCCCCccEEEEccc
Q 012571 218 QSVLDVGCGF-GSFGAHLVSL-KLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP------YPSLSFDMVHCAQC 289 (460)
Q Consensus 218 ~~VLDIGCGt-G~~a~~La~~-g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp------~~~~sFDlVvs~~~ 289 (460)
.+||=+|+|. |.++..+++. |. ..++.+|.+++-++.+++.|....+...+ ...+ ...+.+|+|+-.-.
T Consensus 162 ~~VlV~GaG~vG~~aiq~ak~~G~--~~vi~~~~~~~k~~~a~~lGa~~~i~~~~-~~~~~~~~~~~~~~g~d~v~d~~G 238 (346)
T 4a2c_A 162 KNVIIIGAGTIGLLAIQCAVALGA--KSVTAIDISSEKLALAKSFGAMQTFNSSE-MSAPQMQSVLRELRFNQLILETAG 238 (346)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTC--SEEEEEESCHHHHHHHHHTTCSEEEETTT-SCHHHHHHHHGGGCSSEEEEECSC
T ss_pred CEEEEECCCCcchHHHHHHHHcCC--cEEEEEechHHHHHHHHHcCCeEEEeCCC-CCHHHHHHhhcccCCccccccccc
Confidence 7899899874 5566666665 32 35678899999999999888765543211 1100 12245788775421
Q ss_pred cccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 290 GIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 290 l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
....+....++|++||.+++....
T Consensus 239 -------~~~~~~~~~~~l~~~G~~v~~g~~ 262 (346)
T 4a2c_A 239 -------VPQTVELAVEIAGPHAQLALVGTL 262 (346)
T ss_dssp -------SHHHHHHHHHHCCTTCEEEECCCC
T ss_pred -------ccchhhhhhheecCCeEEEEEecc
Confidence 124678889999999999987654
No 371
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=77.56 E-value=5.2 Score=38.92 Aligned_cols=70 Identities=16% Similarity=0.024 Sum_probs=50.1
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCC---C-CCCccEEEEc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPY---P-SLSFDMVHCA 287 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~---~-~~sFDlVvs~ 287 (460)
.+++|+=||.|.+...+.+.|.....+.++|+++...+.-+.+.....+...|+.++.. + .+.+|+++..
T Consensus 17 ~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~~i~~~~~~Dll~gg 90 (295)
T 2qrv_A 17 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQKHIQEWGPFDLVIGG 90 (295)
T ss_dssp EEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHHHHHHTCCCSEEEEC
T ss_pred CEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHHHhcccCCcCEEEec
Confidence 58999999999999999988865433789999998887655553333444456655531 1 1369999975
No 372
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=77.35 E-value=3.8 Score=40.25 Aligned_cols=91 Identities=14% Similarity=0.123 Sum_probs=59.8
Q ss_pred CeEEEeCC--CCchHHHHHHhccCcee-EEEEeeCCHHHHHHHHH-cCCCeEEEeecccCC-----CCCCCCccEEEEcc
Q 012571 218 QSVLDVGC--GFGSFGAHLVSLKLMAV-CVAVYEATGSQVQLALE-RGLPAMIGNFISRQL-----PYPSLSFDMVHCAQ 288 (460)
Q Consensus 218 ~~VLDIGC--GtG~~a~~La~~g~~~~-~v~giD~s~~~l~~A~~-rgl~~~~~~~d~~~L-----p~~~~sFDlVvs~~ 288 (460)
.+||-+|+ |.|..+..++... .. +++++|.+++..+.+++ .+....+ +....+. ....+.+|+|+.+-
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~--Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~-d~~~~~~~~~~~~~~~~~~d~vi~~~ 238 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFL--GCSRVVGICGTHEKCILLTSELGFDAAI-NYKKDNVAEQLRESCPAGVDVYFDNV 238 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTSCCSEEE-ETTTSCHHHHHHHHCTTCEEEEEESC
T ss_pred cEEEEECCCcHHHHHHHHHHHHC--CCCeEEEEeCCHHHHHHHHHHcCCceEE-ecCchHHHHHHHHhcCCCCCEEEECC
Confidence 68999997 4566666666542 25 78899999988888876 5654332 2111110 00112699998764
Q ss_pred ccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 289 CGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 289 ~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
. ...+.+..+.|++||.+++...
T Consensus 239 G--------~~~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 239 G--------GNISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp C--------HHHHHHHHHTEEEEEEEEECCC
T ss_pred C--------HHHHHHHHHHhccCcEEEEECC
Confidence 2 1468889999999999998754
No 373
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=77.20 E-value=2.2 Score=42.21 Aligned_cols=93 Identities=19% Similarity=0.107 Sum_probs=57.9
Q ss_pred CeEEEeCCC-CchHHHHHHhccCceeEEEEeeCCHHHHHHHH-HcCCCeEEEeecccCCCCCCCCccEEEEccccccccc
Q 012571 218 QSVLDVGCG-FGSFGAHLVSLKLMAVCVAVYEATGSQVQLAL-ERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDK 295 (460)
Q Consensus 218 ~~VLDIGCG-tG~~a~~La~~g~~~~~v~giD~s~~~l~~A~-~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~ 295 (460)
.+||=+|+| .|.++..+++.. ..+++++|.+++..+.++ +.|....+..-+...+.-..+.+|+|+-.-.. .
T Consensus 182 ~~VlV~GaG~vG~~a~qlak~~--Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g~-~--- 255 (357)
T 2cf5_A 182 LRGGILGLGGVGHMGVKIAKAM--GHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPV-H--- 255 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCCS-C---
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEECCCC-h---
Confidence 789999876 366666776652 257889999988888887 55654333211110010001369999865321 1
Q ss_pred cHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 296 KEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 296 d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
..+.+..+.|+|||.++....
T Consensus 256 ---~~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 256 ---HALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp ---CCSHHHHTTEEEEEEEEECSC
T ss_pred ---HHHHHHHHHhccCCEEEEeCC
Confidence 134567789999999988764
No 374
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=76.93 E-value=3.3 Score=40.64 Aligned_cols=89 Identities=24% Similarity=0.166 Sum_probs=60.9
Q ss_pred CeEEEeCC--CCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCC------CCCCCccEEEEccc
Q 012571 218 QSVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP------YPSLSFDMVHCAQC 289 (460)
Q Consensus 218 ~~VLDIGC--GtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp------~~~~sFDlVvs~~~ 289 (460)
.+||-+|+ |.|..+..+++... .+++++ .+++.++.+++.|... +. +..++. .....+|+|+-+-.
T Consensus 152 ~~VlV~Ga~g~iG~~~~q~a~~~G--a~Vi~~-~~~~~~~~~~~lGa~~-i~--~~~~~~~~~~~~~~~~g~D~vid~~g 225 (343)
T 3gaz_A 152 QTVLIQGGGGGVGHVAIQIALARG--ARVFAT-ARGSDLEYVRDLGATP-ID--ASREPEDYAAEHTAGQGFDLVYDTLG 225 (343)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--CEEEEE-ECHHHHHHHHHHTSEE-EE--TTSCHHHHHHHHHTTSCEEEEEESSC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCC--CEEEEE-eCHHHHHHHHHcCCCE-ec--cCCCHHHHHHHHhcCCCceEEEECCC
Confidence 78999994 45778888877622 478888 7888889988877654 22 221111 12346999986531
Q ss_pred cccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 290 GIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 290 l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
. ..+.+..+.|++||.++.....
T Consensus 226 ------~--~~~~~~~~~l~~~G~iv~~g~~ 248 (343)
T 3gaz_A 226 ------G--PVLDASFSAVKRFGHVVSCLGW 248 (343)
T ss_dssp ------T--HHHHHHHHHEEEEEEEEESCCC
T ss_pred ------c--HHHHHHHHHHhcCCeEEEEccc
Confidence 1 3678888999999999986543
No 375
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=76.60 E-value=2.3 Score=42.24 Aligned_cols=93 Identities=19% Similarity=0.165 Sum_probs=56.9
Q ss_pred CeEEEeCCCC-chHHHHHHhccCceeEEEEeeCCHHHHHHHH-HcCCCeEEEeecccCCCCCCCCccEEEEccccccccc
Q 012571 218 QSVLDVGCGF-GSFGAHLVSLKLMAVCVAVYEATGSQVQLAL-ERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDK 295 (460)
Q Consensus 218 ~~VLDIGCGt-G~~a~~La~~g~~~~~v~giD~s~~~l~~A~-~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~ 295 (460)
.+||=+|+|. |..+..+++.. ..+++++|.+++..+.++ +.|....+...+...+.-..+.+|+|+-.-....
T Consensus 189 ~~VlV~GaG~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~~~--- 263 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVAVKFAKAF--GSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAVH--- 263 (366)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSSCC---
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCcHH---
Confidence 6888899753 56666666652 257889999988888776 4465433321111011000136999987532111
Q ss_pred cHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 296 KEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 296 d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
.+.+..+.|++||.++....
T Consensus 264 ----~~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 264 ----PLLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp ----CSHHHHHHEEEEEEEEECCC
T ss_pred ----HHHHHHHHHhcCCEEEEEcc
Confidence 24567789999999988764
No 376
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=76.57 E-value=5.3 Score=38.61 Aligned_cols=89 Identities=20% Similarity=0.099 Sum_probs=57.1
Q ss_pred CeEEEeC-CC-CchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccC-CCCCCCCccEEEEcccccccc
Q 012571 218 QSVLDVG-CG-FGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQ-LPYPSLSFDMVHCAQCGIIWD 294 (460)
Q Consensus 218 ~~VLDIG-CG-tG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~-Lp~~~~sFDlVvs~~~l~~~~ 294 (460)
.+||=+| +| .|.++..+++... .++++++ +++..+.+++.|....+... ..+ +.-.-+.+|+|+-.-.
T Consensus 154 ~~vlV~Ga~G~vG~~a~q~a~~~G--a~vi~~~-~~~~~~~~~~lGa~~~i~~~-~~~~~~~~~~g~D~v~d~~g----- 224 (321)
T 3tqh_A 154 DVVLIHAGAGGVGHLAIQLAKQKG--TTVITTA-SKRNHAFLKALGAEQCINYH-EEDFLLAISTPVDAVIDLVG----- 224 (321)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT--CEEEEEE-CHHHHHHHHHHTCSEEEETT-TSCHHHHCCSCEEEEEESSC-----
T ss_pred CEEEEEcCCcHHHHHHHHHHHHcC--CEEEEEe-ccchHHHHHHcCCCEEEeCC-CcchhhhhccCCCEEEECCC-----
Confidence 7899886 44 5788888887632 4677777 45558888887876443211 111 1101146999886531
Q ss_pred ccHHHHHHHHHHhcCCCcEEEEEe
Q 012571 295 KKEGIFLIEADRLLKPGGYFVLTS 318 (460)
Q Consensus 295 ~d~~~~L~ei~RvLkPGG~lvl~~ 318 (460)
. ..+.+..+.|++||.++...
T Consensus 225 --~-~~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 225 --G-DVGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp --H-HHHHHHGGGEEEEEEEEECC
T ss_pred --c-HHHHHHHHhccCCCEEEEeC
Confidence 1 23478899999999999864
No 377
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=75.01 E-value=14 Score=38.46 Aligned_cols=126 Identities=11% Similarity=0.120 Sum_probs=71.9
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcC---CCeEEEeecccCCCC-----------------C
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---LPAMIGNFISRQLPY-----------------P 277 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rg---l~~~~~~~d~~~Lp~-----------------~ 277 (460)
-+++|+=||.|.+...|.+.|. ..+.++|+++...+.-+.+. ....+...|+..+.. .
T Consensus 89 ~~viDLFaG~GGlslG~~~aG~--~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~~~ 166 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESIGG--QCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHQEGVSDEAAAEHIRQH 166 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTTTE--EEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHHHCTTCTTSCHHHHHHHHHHH
T ss_pred ceEEEecCCccHHHHHHHHCCC--EEEEEEeCCHHHHHHHHHhcccCCCcceeccchhhhhhccccccchhhHHhhhhhc
Confidence 5899999999999999988875 34788999998877655442 122233333332211 0
Q ss_pred CCCccEEEEcccccccc-----------------ccH-HHHHHHHHH---hcCCCcEEEEEeCCCCCCCCCCchhhhHHH
Q 012571 278 SLSFDMVHCAQCGIIWD-----------------KKE-GIFLIEADR---LLKPGGYFVLTSPESKPRGSSSSRKNKSLL 336 (460)
Q Consensus 278 ~~sFDlVvs~~~l~~~~-----------------~d~-~~~L~ei~R---vLkPGG~lvl~~~~~~~~~~~~~~e~~~~w 336 (460)
-..+|+++...--..+. .|. ..++.++.| .++|- +++.+........ .....+
T Consensus 167 ~~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf~e~~riI~~~rPk--~fvlENV~gl~s~----~~g~~f 240 (482)
T 3me5_A 167 IPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRPA--MFVLENVKNLKSH----DKGKTF 240 (482)
T ss_dssp SCCCSEEEEECCCCCC------------------CTTTTSHHHHHHHHHHHHCCS--EEEEEEETTTTTG----GGGHHH
T ss_pred CCCCCEEEecCCCcchhhhCcccccccccccccccCccccHHHHHHHHHHHcCCc--EEEEeCcHHHhcc----cCCcHH
Confidence 13589988653211111 011 124455444 45774 4445444333221 233466
Q ss_pred HHHHHHHHHhCeEEE
Q 012571 337 KVMEEFTEKICWSLI 351 (460)
Q Consensus 337 ~~i~~l~~~~~w~~~ 351 (460)
..+....+++++.+.
T Consensus 241 ~~i~~~L~~lGY~v~ 255 (482)
T 3me5_A 241 RIIMQTLDELGYDVA 255 (482)
T ss_dssp HHHHHHHHHTTEEET
T ss_pred HHHHHHHhcCCcEEE
Confidence 667777788888763
No 378
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=74.97 E-value=1.8 Score=42.52 Aligned_cols=91 Identities=18% Similarity=0.139 Sum_probs=58.2
Q ss_pred CeEEEeCCCC-chHHHHHHhccCcee-EEEEeeCCHHHHHHHHHcCCCeEEEeecccCCC-----CCCCCccEEEEcccc
Q 012571 218 QSVLDVGCGF-GSFGAHLVSLKLMAV-CVAVYEATGSQVQLALERGLPAMIGNFISRQLP-----YPSLSFDMVHCAQCG 290 (460)
Q Consensus 218 ~~VLDIGCGt-G~~a~~La~~g~~~~-~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp-----~~~~sFDlVvs~~~l 290 (460)
.+||-+|+|. |..+..+++.. .. +++++|.+++.++.+++. .. .+.+....++. ...+.+|+|+-.-.
T Consensus 166 ~~VlV~GaG~vG~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~~~l-a~-~v~~~~~~~~~~~~~~~~~~g~D~vid~~g- 240 (343)
T 2dq4_A 166 KSVLITGAGPIGLMAAMVVRAS--GAGPILVSDPNPYRLAFARPY-AD-RLVNPLEEDLLEVVRRVTGSGVEVLLEFSG- 240 (343)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT--TCCSEEEECSCHHHHGGGTTT-CS-EEECTTTSCHHHHHHHHHSSCEEEEEECSC-
T ss_pred CEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHh-HH-hccCcCccCHHHHHHHhcCCCCCEEEECCC-
Confidence 7899999853 66777777652 14 688999999888877553 22 12221111100 00246999986531
Q ss_pred ccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 291 ~~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
. ...+.+..+.|++||.++....
T Consensus 241 -----~-~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 241 -----N-EAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp -----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred -----C-HHHHHHHHHHHhcCCEEEEEec
Confidence 1 2367889999999999988754
No 379
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=74.52 E-value=5.7 Score=38.99 Aligned_cols=56 Identities=14% Similarity=0.039 Sum_probs=43.6
Q ss_pred hHHHHHHHHHHccCCCchhhccCCCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCH---HHHHHHHHcC
Q 012571 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATG---SQVQLALERG 261 (460)
Q Consensus 194 ~~~~~~i~~~l~~~~~~~~~~~~~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~---~~l~~A~~rg 261 (460)
...++.+.+... ..+ ..|||-=||+|+.+......| ..++|+|+++ ..++.+++|-
T Consensus 229 ~~l~~~~i~~~~-~~~--------~~vlDpF~GsGtt~~aa~~~~---r~~ig~e~~~~~~~~~~~~~~Rl 287 (319)
T 1eg2_A 229 AAVIERLVRALS-HPG--------STVLDFFAGSGVTARVAIQEG---RNSICTDAAPVFKEYYQKQLTFL 287 (319)
T ss_dssp HHHHHHHHHHHS-CTT--------CEEEETTCTTCHHHHHHHHHT---CEEEEEESSTHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhC-CCC--------CEEEecCCCCCHHHHHHHHcC---CcEEEEECCccHHHHHHHHHHHH
Confidence 345555555543 233 689999999999998888776 5789999999 9999998873
No 380
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=73.89 E-value=7.2 Score=39.84 Aligned_cols=92 Identities=14% Similarity=0.134 Sum_probs=63.3
Q ss_pred CeEEEeCC--CCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCC--------------------
Q 012571 218 QSVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP-------------------- 275 (460)
Q Consensus 218 ~~VLDIGC--GtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp-------------------- 275 (460)
.+||=+|+ |.|.++..+++... .++++++.+++.++.+++.|....+... ..++.
T Consensus 230 ~~VlV~GasG~vG~~avqlak~~G--a~vi~~~~~~~~~~~~~~lGa~~vi~~~-~~d~~~~~~~~~~~~~~~~~~~~~i 306 (456)
T 3krt_A 230 DNVLIWGASGGLGSYATQFALAGG--ANPICVVSSPQKAEICRAMGAEAIIDRN-AEGYRFWKDENTQDPKEWKRFGKRI 306 (456)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHHTCCEEEETT-TTTCCSEEETTEECHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC--CeEEEEECCHHHHHHHHhhCCcEEEecC-cCcccccccccccchHHHHHHHHHH
Confidence 78999997 45778888877632 5777888899999999888875544311 11110
Q ss_pred ---CCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 276 ---YPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 276 ---~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
.....+|+|+-.-. ...+....++|+|||.+++....
T Consensus 307 ~~~t~g~g~Dvvid~~G--------~~~~~~~~~~l~~~G~iv~~G~~ 346 (456)
T 3krt_A 307 RELTGGEDIDIVFEHPG--------RETFGASVFVTRKGGTITTCAST 346 (456)
T ss_dssp HHHHTSCCEEEEEECSC--------HHHHHHHHHHEEEEEEEEESCCT
T ss_pred HHHhCCCCCcEEEEcCC--------chhHHHHHHHhhCCcEEEEEecC
Confidence 11247999886531 13678889999999999987643
No 381
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=73.51 E-value=9.3 Score=35.93 Aligned_cols=50 Identities=8% Similarity=0.024 Sum_probs=32.1
Q ss_pred HHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhCeEEEeeecceeeeeecc
Q 012571 298 GIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQQDETFIWQKTV 364 (460)
Q Consensus 298 ~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~~~~~~~~~iw~k~~ 364 (460)
...+.+++|+|+|||.+++... .. ....+..+..+.+|... ...+|.|..
T Consensus 54 ~~~l~~~~~~Lk~~g~i~v~~~-----------d~--~~~~~~~~~~~~gf~~~----~~iiW~K~~ 103 (260)
T 1g60_A 54 YRWIDKVLDKLDKDGSLYIFNT-----------PF--NCAFICQYLVSKGMIFQ----NWITWDKRD 103 (260)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEC-----------HH--HHHHHHHHHHHTTCEEE----EEEEECCCC
T ss_pred HHHHHHHHHHhcCCeEEEEEcC-----------cH--HHHHHHHHHHhhcccee----EEEEEEecC
Confidence 4578899999999999988742 11 11223334456677543 346898875
No 382
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=73.22 E-value=7.8 Score=38.20 Aligned_cols=89 Identities=20% Similarity=0.093 Sum_probs=58.3
Q ss_pred CeEEEeCCCC-chHHHHHHhc-cCceeEEEEeeCCH---HHHHHHHHcCCCeEEEeecccCCC--C--CCCCccEEEEcc
Q 012571 218 QSVLDVGCGF-GSFGAHLVSL-KLMAVCVAVYEATG---SQVQLALERGLPAMIGNFISRQLP--Y--PSLSFDMVHCAQ 288 (460)
Q Consensus 218 ~~VLDIGCGt-G~~a~~La~~-g~~~~~v~giD~s~---~~l~~A~~rgl~~~~~~~d~~~Lp--~--~~~sFDlVvs~~ 288 (460)
.+||-+|+|. |..+..+++. | .+|+++|.++ +..+.+++.|.... + .. ++. . ..+.+|+|+.+-
T Consensus 182 ~~VlV~GaG~vG~~~~q~a~~~G---a~Vi~~~~~~~~~~~~~~~~~~ga~~v--~-~~-~~~~~~~~~~~~~d~vid~~ 254 (366)
T 2cdc_A 182 RKVLVVGTGPIGVLFTLLFRTYG---LEVWMANRREPTEVEQTVIEETKTNYY--N-SS-NGYDKLKDSVGKFDVIIDAT 254 (366)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHT---CEEEEEESSCCCHHHHHHHHHHTCEEE--E-CT-TCSHHHHHHHCCEEEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CEEEEEeCCccchHHHHHHHHhCCcee--c-hH-HHHHHHHHhCCCCCEEEECC
Confidence 7899999842 5555566654 4 4788999887 77788877775432 2 11 111 0 014699998763
Q ss_pred ccccccccHHHHH-HHHHHhcCCCcEEEEEeCC
Q 012571 289 CGIIWDKKEGIFL-IEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 289 ~l~~~~~d~~~~L-~ei~RvLkPGG~lvl~~~~ 320 (460)
.. . ..+ ++..+.|++||.+++....
T Consensus 255 g~------~-~~~~~~~~~~l~~~G~iv~~g~~ 280 (366)
T 2cdc_A 255 GA------D-VNILGNVIPLLGRNGVLGLFGFS 280 (366)
T ss_dssp CC------C-THHHHHHGGGEEEEEEEEECSCC
T ss_pred CC------h-HHHHHHHHHHHhcCCEEEEEecC
Confidence 21 1 145 8889999999999887653
No 383
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=72.09 E-value=13 Score=37.57 Aligned_cols=92 Identities=15% Similarity=0.104 Sum_probs=62.7
Q ss_pred CeEEEeCC--CCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCC--------------------
Q 012571 218 QSVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP-------------------- 275 (460)
Q Consensus 218 ~~VLDIGC--GtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp-------------------- 275 (460)
.+||=+|+ |.|..+..+++... .+++.++.+++.++.+++.|....+...+ ..+.
T Consensus 222 ~~VlV~GasG~iG~~a~qla~~~G--a~vi~~~~~~~~~~~~~~lGa~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 298 (447)
T 4a0s_A 222 DIVLIWGASGGLGSYAIQFVKNGG--GIPVAVVSSAQKEAAVRALGCDLVINRAE-LGITDDIADDPRRVVETGRKLAKL 298 (447)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHTTCCCEEEHHH-HTCCTTGGGCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHhcCCCEEEeccc-ccccccccccccccchhhhHHHHH
Confidence 78999996 35777777777522 57788889999999998877665443211 1110
Q ss_pred ---CCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 276 ---YPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 276 ---~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
...+.+|+|+-+-. . ..+....+.|++||.+++....
T Consensus 299 v~~~~g~g~Dvvid~~G------~--~~~~~~~~~l~~~G~iv~~G~~ 338 (447)
T 4a0s_A 299 VVEKAGREPDIVFEHTG------R--VTFGLSVIVARRGGTVVTCGSS 338 (447)
T ss_dssp HHHHHSSCCSEEEECSC------H--HHHHHHHHHSCTTCEEEESCCT
T ss_pred HHHHhCCCceEEEECCC------c--hHHHHHHHHHhcCCEEEEEecC
Confidence 00346999987532 1 2577888999999999987643
No 384
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=71.79 E-value=5.9 Score=33.32 Aligned_cols=94 Identities=20% Similarity=0.238 Sum_probs=56.8
Q ss_pred CeEEEeCCCC-ch-HHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccC-CC-CCCCCccEEEEccccccc
Q 012571 218 QSVLDVGCGF-GS-FGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQ-LP-YPSLSFDMVHCAQCGIIW 293 (460)
Q Consensus 218 ~~VLDIGCGt-G~-~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~-Lp-~~~~sFDlVvs~~~l~~~ 293 (460)
.+|+=+|+|. |. ++..|.+.| ..++++|.+++.++.+++.+..+...+..... +. ..-..+|+|++...
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g---~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~---- 80 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASD---IPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIP---- 80 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT---CCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCS----
T ss_pred CCEEEECcCHHHHHHHHHHHHCC---CCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECC----
Confidence 5788888864 33 333344445 57899999999999888877765554432111 10 11246888887531
Q ss_pred cccH-HHHHHHHHHhcCCCcEEEEEeC
Q 012571 294 DKKE-GIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 294 ~~d~-~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
++. ...+....+.+.|+..++....
T Consensus 81 -~~~~n~~~~~~a~~~~~~~~iiar~~ 106 (140)
T 3fwz_A 81 -NGYEAGEIVASARAKNPDIEIIARAH 106 (140)
T ss_dssp -CHHHHHHHHHHHHHHCSSSEEEEEES
T ss_pred -ChHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 122 2234456677888888776554
No 385
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=71.60 E-value=2.7 Score=36.39 Aligned_cols=43 Identities=16% Similarity=0.132 Sum_probs=30.8
Q ss_pred CCCCCCCccEEEEccccc-cccccHHHHHHHHHHhcCCCcEEEE
Q 012571 274 LPYPSLSFDMVHCAQCGI-IWDKKEGIFLIEADRLLKPGGYFVL 316 (460)
Q Consensus 274 Lp~~~~sFDlVvs~~~l~-~~~~d~~~~L~ei~RvLkPGG~lvl 316 (460)
..+++++||.|+...--- ....-+..++..+++.|||||.|..
T Consensus 53 VsLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 53 ITLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred ccCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 346789999999753211 1112236799999999999999987
No 386
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=69.49 E-value=5.1 Score=38.88 Aligned_cols=100 Identities=10% Similarity=0.009 Sum_probs=67.1
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcC---CCeEEEeecccC-C---CCCCCCccEEEEcccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---LPAMIGNFISRQ-L---PYPSLSFDMVHCAQCG 290 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rg---l~~~~~~~d~~~-L---p~~~~sFDlVvs~~~l 290 (460)
..+||+=+|+|.++..+++.+ .+++.+|.++...+..+++- -++.+...|... + .-+...||+|++-= -
T Consensus 93 ~~~LDlfaGSGaLgiEaLS~~---d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDP-P 168 (283)
T 2oo3_A 93 NSTLSYYPGSPYFAINQLRSQ---DRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDP-S 168 (283)
T ss_dssp SSSCCEEECHHHHHHHHSCTT---SEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEECC-C
T ss_pred CCceeEeCCcHHHHHHHcCCC---CeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEECC-C
Confidence 458999999999999999854 57788999999888776541 235555555322 1 12345699999752 1
Q ss_pred ccccccHHHHHHHHHH--hcCCCcEEEEEeCCC
Q 012571 291 IIWDKKEGIFLIEADR--LLKPGGYFVLTSPES 321 (460)
Q Consensus 291 ~~~~~d~~~~L~ei~R--vLkPGG~lvl~~~~~ 321 (460)
+...++...++..+.+ .+.|+|.+++--|..
T Consensus 169 Ye~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~ 201 (283)
T 2oo3_A 169 YERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVV 201 (283)
T ss_dssp CCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEES
T ss_pred CCCCcHHHHHHHHHHHhCccCCCeEEEEEEecc
Confidence 2222344556655555 567899999887753
No 387
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=67.36 E-value=8.9 Score=37.92 Aligned_cols=91 Identities=15% Similarity=0.108 Sum_probs=59.8
Q ss_pred CeEEEeCCC--CchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCC-----CCCCCccEEEEcccc
Q 012571 218 QSVLDVGCG--FGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP-----YPSLSFDMVHCAQCG 290 (460)
Q Consensus 218 ~~VLDIGCG--tG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp-----~~~~sFDlVvs~~~l 290 (460)
.+||=+|++ .|..+..+++... .+++++. +++-.+.+++.|....+..- ..++. ..++.+|+|+-.-.
T Consensus 166 ~~VlV~Ga~G~vG~~a~qla~~~G--a~Vi~~~-~~~~~~~~~~lGa~~vi~~~-~~~~~~~v~~~t~g~~d~v~d~~g- 240 (371)
T 3gqv_A 166 VYVLVYGGSTATATVTMQMLRLSG--YIPIATC-SPHNFDLAKSRGAEEVFDYR-APNLAQTIRTYTKNNLRYALDCIT- 240 (371)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT--CEEEEEE-CGGGHHHHHHTTCSEEEETT-STTHHHHHHHHTTTCCCEEEESSC-
T ss_pred cEEEEECCCcHHHHHHHHHHHHCC--CEEEEEe-CHHHHHHHHHcCCcEEEECC-CchHHHHHHHHccCCccEEEECCC-
Confidence 789999983 7888888887632 4666664 77788888888865443211 11110 11245999986521
Q ss_pred ccccccHHHHHHHHHHhc-CCCcEEEEEeC
Q 012571 291 IIWDKKEGIFLIEADRLL-KPGGYFVLTSP 319 (460)
Q Consensus 291 ~~~~~d~~~~L~ei~RvL-kPGG~lvl~~~ 319 (460)
. ...+....+.| ++||+++....
T Consensus 241 -----~-~~~~~~~~~~l~~~~G~iv~~g~ 264 (371)
T 3gqv_A 241 -----N-VESTTFCFAAIGRAGGHYVSLNP 264 (371)
T ss_dssp -----S-HHHHHHHHHHSCTTCEEEEESSC
T ss_pred -----c-hHHHHHHHHHhhcCCCEEEEEec
Confidence 1 23677888888 69999988764
No 388
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=64.45 E-value=8.2 Score=38.17 Aligned_cols=92 Identities=16% Similarity=0.100 Sum_probs=57.7
Q ss_pred CeEEEeC--CCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCC---CCCCCccEEEEcccccc
Q 012571 218 QSVLDVG--CGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP---YPSLSFDMVHCAQCGII 292 (460)
Q Consensus 218 ~~VLDIG--CGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp---~~~~sFDlVvs~~~l~~ 292 (460)
.+||=+| .|.|..+..+++... .++++++ +++..+.+++.|....+... ..++. ...+.+|+|+-+-.
T Consensus 185 ~~VlV~Ga~G~vG~~~~qla~~~G--a~Vi~~~-~~~~~~~~~~lGa~~v~~~~-~~~~~~~~~~~~g~D~vid~~g--- 257 (375)
T 2vn8_A 185 KRVLILGASGGVGTFAIQVMKAWD--AHVTAVC-SQDASELVRKLGADDVIDYK-SGSVEEQLKSLKPFDFILDNVG--- 257 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--CEEEEEE-CGGGHHHHHHTTCSEEEETT-SSCHHHHHHTSCCBSEEEESSC---
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC--CEEEEEe-ChHHHHHHHHcCCCEEEECC-chHHHHHHhhcCCCCEEEECCC---
Confidence 7899998 346777877777522 4677777 66677788777765443211 11100 01146999986532
Q ss_pred ccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 293 WDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 293 ~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
.....+.+..+.|++||.++....
T Consensus 258 ---~~~~~~~~~~~~l~~~G~iv~~g~ 281 (375)
T 2vn8_A 258 ---GSTETWAPDFLKKWSGATYVTLVT 281 (375)
T ss_dssp ---TTHHHHGGGGBCSSSCCEEEESCC
T ss_pred ---ChhhhhHHHHHhhcCCcEEEEeCC
Confidence 111245677889999999988653
No 389
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=63.61 E-value=33 Score=33.43 Aligned_cols=91 Identities=15% Similarity=0.051 Sum_probs=53.9
Q ss_pred CeEEEeCC--CCchHHHHHHhc-cCceeEEEEeeCCH---HHHHHHHHcCCCeEEEee-----cccCCCCCCCCccEEEE
Q 012571 218 QSVLDVGC--GFGSFGAHLVSL-KLMAVCVAVYEATG---SQVQLALERGLPAMIGNF-----ISRQLPYPSLSFDMVHC 286 (460)
Q Consensus 218 ~~VLDIGC--GtG~~a~~La~~-g~~~~~v~giD~s~---~~l~~A~~rgl~~~~~~~-----d~~~Lp~~~~sFDlVvs 286 (460)
.+||=+|+ |.|.++..+++. |. ..+..++.++ +..+.+++.|....+... +..++.-..+.+|+|+-
T Consensus 169 ~~VlV~Ga~G~vG~~aiqlak~~Ga--~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~~Dvvid 246 (357)
T 1zsy_A 169 DSVIQNASNSGVGQAVIQIAAALGL--RTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALN 246 (357)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHHTC--EEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCCCSEEEE
T ss_pred CEEEEeCCcCHHHHHHHHHHHHcCC--EEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCCceEEEE
Confidence 78999996 468888888876 43 2233444432 345677777765444321 11122111124899886
Q ss_pred ccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012571 287 AQCGIIWDKKEGIFLIEADRLLKPGGYFVLTS 318 (460)
Q Consensus 287 ~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~ 318 (460)
.-. . . .+.+..+.|+|||.+++..
T Consensus 247 ~~g------~-~-~~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 247 CVG------G-K-SSTELLRQLARGGTMVTYG 270 (357)
T ss_dssp SSC------H-H-HHHHHHTTSCTTCEEEECC
T ss_pred CCC------c-H-HHHHHHHhhCCCCEEEEEe
Confidence 521 1 1 2346789999999998875
No 390
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=62.21 E-value=15 Score=35.04 Aligned_cols=99 Identities=13% Similarity=0.179 Sum_probs=60.7
Q ss_pred CeEEEeCCCCchHHHHHHhc------cCceeEEEEee-----CCH----------------------HHHHHHH---Hc-
Q 012571 218 QSVLDVGCGFGSFGAHLVSL------KLMAVCVAVYE-----ATG----------------------SQVQLAL---ER- 260 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~------g~~~~~v~giD-----~s~----------------------~~l~~A~---~r- 260 (460)
..|+|+|+-.|..+..++.. ......+.+.| +.. +.++... ++
T Consensus 71 G~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~~ 150 (257)
T 3tos_A 71 GVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHECS 150 (257)
T ss_dssp SEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHTT
T ss_pred CeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhhh
Confidence 68999999999988776542 11335777877 211 1122111 11
Q ss_pred ---C---CCeEEEeecccC-CC-----CCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 261 ---G---LPAMIGNFISRQ-LP-----YPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 261 ---g---l~~~~~~~d~~~-Lp-----~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
+ -++.+..++..+ +| .+..+||+|+.-. -.+ ......+..+...|+|||++++-+.
T Consensus 151 ~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~--D~Y-~~t~~~le~~~p~l~~GGvIv~DD~ 218 (257)
T 3tos_A 151 DFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDL--DLY-EPTKAVLEAIRPYLTKGSIVAFDEL 218 (257)
T ss_dssp STTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECC--CCH-HHHHHHHHHHGGGEEEEEEEEESST
T ss_pred hhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcC--ccc-chHHHHHHHHHHHhCCCcEEEEcCC
Confidence 2 235555554322 22 2456799999863 122 2334578899999999999999885
No 391
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=59.24 E-value=49 Score=31.91 Aligned_cols=90 Identities=20% Similarity=0.184 Sum_probs=57.7
Q ss_pred CeEEEeCCCC--chHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEccccccccc
Q 012571 218 QSVLDVGCGF--GSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDK 295 (460)
Q Consensus 218 ~~VLDIGCGt--G~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~ 295 (460)
.+|.=||+|. +.++..|.+.|. ...|+++|.+++.++.+.+.|...... .+..++ .-...|+|+.+- .. .
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~-~~~V~~~dr~~~~~~~a~~~G~~~~~~-~~~~~~--~~~~aDvVilav---p~-~ 105 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGF-KGKIYGYDINPESISKAVDLGIIDEGT-TSIAKV--EDFSPDFVMLSS---PV-R 105 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTC-CSEEEEECSCHHHHHHHHHTTSCSEEE-SCTTGG--GGGCCSEEEECS---CG-G
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHCCCcchhc-CCHHHH--hhccCCEEEEeC---CH-H
Confidence 6788899874 345666666663 137899999999999888777532221 111110 123579988752 11 2
Q ss_pred cHHHHHHHHHHhcCCCcEEE
Q 012571 296 KEGIFLIEADRLLKPGGYFV 315 (460)
Q Consensus 296 d~~~~L~ei~RvLkPGG~lv 315 (460)
....++.++...|+||..++
T Consensus 106 ~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 106 TFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp GHHHHHHHHHHHSCTTCEEE
T ss_pred HHHHHHHHHhhccCCCcEEE
Confidence 34567889999999987654
No 392
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=58.16 E-value=6.2 Score=40.57 Aligned_cols=41 Identities=20% Similarity=0.281 Sum_probs=30.7
Q ss_pred CeEEEeCCCCchHHHHHHhc----cCceeEEEEeeCCHHHHHHHH
Q 012571 218 QSVLDVGCGFGSFGAHLVSL----KLMAVCVAVYEATGSQVQLAL 258 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~----g~~~~~v~giD~s~~~l~~A~ 258 (460)
.+|+|+|.|.|.++..+++. +....++..+|+|+.+.+.-+
T Consensus 139 ~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~ 183 (432)
T 4f3n_A 139 RRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQR 183 (432)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHH
T ss_pred CeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHH
Confidence 68999999999999888653 222347889999987655433
No 393
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=56.24 E-value=16 Score=36.86 Aligned_cols=69 Identities=13% Similarity=0.112 Sum_probs=43.9
Q ss_pred CeEEEeCCCCchHHHHHHhcc------CceeEEEEeeCCHHHHHHHHHc--CC-CeEEEeecccCCCCCCCCccEEEEcc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLK------LMAVCVAVYEATGSQVQLALER--GL-PAMIGNFISRQLPYPSLSFDMVHCAQ 288 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g------~~~~~v~giD~s~~~l~~A~~r--gl-~~~~~~~d~~~Lp~~~~sFDlVvs~~ 288 (460)
-.|+|+|.|.|.++..+++.- ....++..+|+|+...+.-+++ +. ++.+.+ +.+++| ++ .=+|+++.
T Consensus 82 ~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~~~v~W~~-~l~~lp--~~-~~~viANE 157 (387)
T 1zkd_A 82 LRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGIRNIHWHD-SFEDVP--EG-PAVILANE 157 (387)
T ss_dssp EEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTCSSEEEES-SGGGSC--CS-SEEEEEES
T ss_pred cEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCCCCeEEeC-ChhhcC--CC-CeEEEecc
Confidence 479999999999998887530 1235889999999887755443 21 344443 134454 22 34666665
Q ss_pred cc
Q 012571 289 CG 290 (460)
Q Consensus 289 ~l 290 (460)
.+
T Consensus 158 ~f 159 (387)
T 1zkd_A 158 YF 159 (387)
T ss_dssp SG
T ss_pred cc
Confidence 44
No 394
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=55.40 E-value=21 Score=34.93 Aligned_cols=93 Identities=13% Similarity=0.098 Sum_probs=57.5
Q ss_pred CeEEEeCCC-CchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecc-----cCCCCCCCCccEEEEccccc
Q 012571 218 QSVLDVGCG-FGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFIS-----RQLPYPSLSFDMVHCAQCGI 291 (460)
Q Consensus 218 ~~VLDIGCG-tG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~-----~~Lp~~~~sFDlVvs~~~l~ 291 (460)
.+||=+|+| .|.++..+++... ..+++++|.+++..+.+++.|....+..-+. .++. ....+|+|+-.-.
T Consensus 188 ~~VlV~GaG~vG~~avqlak~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~v~~~~-~g~g~Dvvid~~G-- 263 (359)
T 1h2b_A 188 AYVAIVGVGGLGHIAVQLLKVMT-PATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELT-RGRGVNVAMDFVG-- 263 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESSHHHHHHHHHTTCSEEEETTSCHHHHHHHHT-TTCCEEEEEESSC--
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCeEEEEeCCHHHHHHHHHhCCCEEEeccchHHHHHHHHh-CCCCCcEEEECCC--
Confidence 789999875 3556666666420 2579999999999999988776544321110 1111 1236999986531
Q ss_pred cccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 292 IWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 292 ~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
- .....+.+..+. +||.+++...
T Consensus 264 -~--~~~~~~~~~~~~--~~G~~v~~g~ 286 (359)
T 1h2b_A 264 -S--QATVDYTPYLLG--RMGRLIIVGY 286 (359)
T ss_dssp -C--HHHHHHGGGGEE--EEEEEEECCC
T ss_pred -C--chHHHHHHHhhc--CCCEEEEEeC
Confidence 1 000145556666 9999988764
No 395
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=55.05 E-value=21 Score=30.98 Aligned_cols=95 Identities=15% Similarity=0.035 Sum_probs=55.3
Q ss_pred CeEEEeCCCC-ch-HHHHHHhc-cCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccC-CC-C-CCCCccEEEEccccc
Q 012571 218 QSVLDVGCGF-GS-FGAHLVSL-KLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQ-LP-Y-PSLSFDMVHCAQCGI 291 (460)
Q Consensus 218 ~~VLDIGCGt-G~-~a~~La~~-g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~-Lp-~-~~~sFDlVvs~~~l~ 291 (460)
.+|+=+|+|. |. ++..|.+. | ..|+++|.+++.++.+++.+..+...+..... +. . .-..+|+|+..-.
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g---~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~-- 114 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYG---KISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMP-- 114 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHC---SCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCS--
T ss_pred CcEEEECCCHHHHHHHHHHHhccC---CeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCC--
Confidence 5788888763 32 23334444 4 46889999999988887777765554432111 11 1 1245899887521
Q ss_pred cccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 292 IWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 292 ~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
. +.....+.+..+.+.|++.++....
T Consensus 115 ~--~~~~~~~~~~~~~~~~~~~ii~~~~ 140 (183)
T 3c85_A 115 H--HQGNQTALEQLQRRNYKGQIAAIAE 140 (183)
T ss_dssp S--HHHHHHHHHHHHHTTCCSEEEEEES
T ss_pred C--hHHHHHHHHHHHHHCCCCEEEEEEC
Confidence 1 1112234456666777888877543
No 396
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=54.72 E-value=23 Score=35.89 Aligned_cols=94 Identities=16% Similarity=0.136 Sum_probs=60.7
Q ss_pred CeEEEeCCCCchHHHHHH----hccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccC-CC-CCCCCccEEEEccccc
Q 012571 218 QSVLDVGCGFGSFGAHLV----SLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQ-LP-YPSLSFDMVHCAQCGI 291 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La----~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~-Lp-~~~~sFDlVvs~~~l~ 291 (460)
.+|+=+|+| .++..++ +.| ..|+.+|.+++.++.+++.+..+.++++.... |. ..-...|+|++...
T Consensus 5 ~~viIiG~G--r~G~~va~~L~~~g---~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~-- 77 (413)
T 3l9w_A 5 MRVIIAGFG--RFGQITGRLLLSSG---VKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAID-- 77 (413)
T ss_dssp CSEEEECCS--HHHHHHHHHHHHTT---CCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCS--
T ss_pred CeEEEECCC--HHHHHHHHHHHHCC---CCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCC--
Confidence 468888875 4444443 344 57889999999999998888888777652211 10 12346888887631
Q ss_pred cccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 292 IWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 292 ~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
. +.....+....|-+.|...++.....
T Consensus 78 ~--~~~n~~i~~~ar~~~p~~~Iiara~~ 104 (413)
T 3l9w_A 78 D--PQTNLQLTEMVKEHFPHLQIIARARD 104 (413)
T ss_dssp S--HHHHHHHHHHHHHHCTTCEEEEEESS
T ss_pred C--hHHHHHHHHHHHHhCCCCeEEEEECC
Confidence 1 12224566777888899888776553
No 397
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=53.94 E-value=6.9 Score=39.17 Aligned_cols=98 Identities=16% Similarity=0.052 Sum_probs=54.2
Q ss_pred CCeEEEeCCCC-chHHHHHHhc-cCceeEEEEeeCCHHHHHHHHHc-CCCeEEEeecccCCCCCCCCccEEEEccccccc
Q 012571 217 VQSVLDVGCGF-GSFGAHLVSL-KLMAVCVAVYEATGSQVQLALER-GLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIW 293 (460)
Q Consensus 217 ~~~VLDIGCGt-G~~a~~La~~-g~~~~~v~giD~s~~~l~~A~~r-gl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~ 293 (460)
..+|+=+|+|. |..+..++.. | ++|+++|.+++.++.+.+. +..+.....+...+.-.-..+|+|+.+- ....
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~G---a~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~-~~p~ 243 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMG---ATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAV-LVPG 243 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECC-CCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECC-CcCC
Confidence 47899999853 3333333332 4 5799999999888777653 5443222111111100012579998752 1111
Q ss_pred cccHHHHHHHHHHhcCCCcEEEEEe
Q 012571 294 DKKEGIFLIEADRLLKPGGYFVLTS 318 (460)
Q Consensus 294 ~~d~~~~L~ei~RvLkPGG~lvl~~ 318 (460)
.+.+..+.++..+.+||||.++...
T Consensus 244 ~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 244 AKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp SCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCCcceecHHHHhcCCCCcEEEEEe
Confidence 1111113466778899999988665
No 398
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=52.59 E-value=8.6 Score=37.68 Aligned_cols=43 Identities=23% Similarity=0.336 Sum_probs=28.4
Q ss_pred CCCCccEEEEccc--c--------ccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 277 PSLSFDMVHCAQC--G--------IIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 277 ~~~sFDlVvs~~~--l--------~~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
++++||+|++.=- . ..|.......|.++.|+|+|||.+++...
T Consensus 55 ~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~ 107 (319)
T 1eg2_A 55 PDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGG 107 (319)
T ss_dssp CTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 3567888887410 0 01112234578899999999999999765
No 399
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=52.26 E-value=96 Score=28.39 Aligned_cols=66 Identities=11% Similarity=-0.027 Sum_probs=42.0
Q ss_pred CeEEEeCCCCchHHHHHHhcc-CceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLK-LMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQC 289 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g-~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~ 289 (460)
++||=+| + |..+..+++.- -...+|++++-++...+.....+ +.+..+|..++. -..+|+|+....
T Consensus 6 ~~ilVtG-a-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~D~~d~~--~~~~d~vi~~a~ 72 (286)
T 3ius_A 6 GTLLSFG-H-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASG--AEPLLWPGEEPS--LDGVTHLLISTA 72 (286)
T ss_dssp CEEEEET-C-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTT--EEEEESSSSCCC--CTTCCEEEECCC
T ss_pred CcEEEEC-C-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCC--CeEEEecccccc--cCCCCEEEECCC
Confidence 5799999 4 88777766541 01257888888776555444433 555556666655 456898887643
No 400
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=51.19 E-value=16 Score=35.63 Aligned_cols=91 Identities=9% Similarity=0.055 Sum_probs=56.4
Q ss_pred CeEEEe-CCC-CchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCC------CCCCCccEEEEccc
Q 012571 218 QSVLDV-GCG-FGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP------YPSLSFDMVHCAQC 289 (460)
Q Consensus 218 ~~VLDI-GCG-tG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp------~~~~sFDlVvs~~~ 289 (460)
.+||=. |+| .|..+..+++.. ..+++++|.+++..+.+++.|....+.. +..++. ...+.+|+|+-+-.
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~-~~~~~~~~v~~~~~~~g~D~vid~~g 242 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEE--GFRPIVTVRRDEQIALLKDIGAAHVLNE-KAPDFEATLREVMKAEQPRIFLDAVT 242 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESCGGGHHHHHHHTCSEEEET-TSTTHHHHHHHHHHHHCCCEEEESSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCCEEEEC-CcHHHHHHHHHHhcCCCCcEEEECCC
Confidence 456543 332 456666666652 2578999999988999988776544321 111110 00136999986532
Q ss_pred cccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 290 GIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 290 l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
...+.++.+.|++||.+++...
T Consensus 243 --------~~~~~~~~~~l~~~G~iv~~G~ 264 (349)
T 3pi7_A 243 --------GPLASAIFNAMPKRARWIIYGR 264 (349)
T ss_dssp --------HHHHHHHHHHSCTTCEEEECCC
T ss_pred --------ChhHHHHHhhhcCCCEEEEEec
Confidence 1134778899999999998764
No 401
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=50.88 E-value=1.1e+02 Score=34.71 Aligned_cols=128 Identities=13% Similarity=0.049 Sum_probs=71.5
Q ss_pred CCeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeeccc-----------------CCCCCCC
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISR-----------------QLPYPSL 279 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~-----------------~Lp~~~~ 279 (460)
..+++|+=||.|.++..|.+.|.. ..+.++|+++...+.-+.+.....+...|+. .+| ..+
T Consensus 540 ~l~~iDLFaG~GGlslGl~~AG~~-~vv~avEid~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~~di~~~~~~~lp-~~~ 617 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQAGIS-DTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLP-QKG 617 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHHTSE-EEEEEECSSHHHHHHHHHHCTTSEEECSCHHHHHHHHHHTCSBCTTCCBCC-CTT
T ss_pred CCeEEEeccCccHHHHHHHHCCCC-ceEEEEECCHHHHHHHHHhCCCCccccccHHHHhhhccchhhhhhhhhhcc-cCC
Confidence 358999999999999999888752 3567899999988766555433333322221 122 135
Q ss_pred CccEEEEcccccccc----------ccH-HHH---HHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHH
Q 012571 280 SFDMVHCAQCGIIWD----------KKE-GIF---LIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEK 345 (460)
Q Consensus 280 sFDlVvs~~~l~~~~----------~d~-~~~---L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~ 345 (460)
.+|+|+...--..+. ++. ..+ +.++.+.++|- +++.+........ .....+..+....++
T Consensus 618 ~vDll~GGpPCQ~FS~ag~~~~~~~~d~R~~L~~~~~riv~~~rPk--~~llENV~glls~----~~~~~~~~i~~~L~~ 691 (1002)
T 3swr_A 618 DVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPR--FFLLENVRNFVSF----KRSMVLKLTLRCLVR 691 (1002)
T ss_dssp TCSEEEECCCCTTCCSSSCCCHHHHHHHTTSHHHHHHHHHHHHCCS--EEEEEEEGGGGTT----GGGHHHHHHHHHHHH
T ss_pred CeeEEEEcCCCcchhhhCCCCCCcccchhhHHHHHHHHHHHHhCCC--EEEEeccHHHhcc----CcchHHHHHHHHHHh
Confidence 799999753111110 111 012 33455566775 4444443322111 223345555555666
Q ss_pred hCeEEEe
Q 012571 346 ICWSLIA 352 (460)
Q Consensus 346 ~~w~~~~ 352 (460)
+++.+..
T Consensus 692 lGY~v~~ 698 (1002)
T 3swr_A 692 MGYQCTF 698 (1002)
T ss_dssp HTCEEEE
T ss_pred cCCeEEE
Confidence 7776643
No 402
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=50.77 E-value=40 Score=27.69 Aligned_cols=92 Identities=13% Similarity=0.142 Sum_probs=52.1
Q ss_pred CeEEEeCCCCchHHHHH----HhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeeccc-CCC-CCCCCccEEEEccccc
Q 012571 218 QSVLDVGCGFGSFGAHL----VSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISR-QLP-YPSLSFDMVHCAQCGI 291 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~L----a~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~-~Lp-~~~~sFDlVvs~~~l~ 291 (460)
.+|+=+|+| .++..+ .+.| ..++.+|.+++.++.+++.+..+...+.... .+. ..-..+|+|+..-.
T Consensus 7 ~~v~I~G~G--~iG~~la~~L~~~g---~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~-- 79 (141)
T 3llv_A 7 YEYIVIGSE--AAGVGLVRELTAAG---KKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGS-- 79 (141)
T ss_dssp CSEEEECCS--HHHHHHHHHHHHTT---CCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCS--
T ss_pred CEEEEECCC--HHHHHHHHHHHHCC---CeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecC--
Confidence 468889985 444444 4445 5788999999999888777755444332111 010 12246898887531
Q ss_pred cccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 292 IWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 292 ~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
. +.....+....+-+. .+.++....
T Consensus 80 ~--~~~n~~~~~~a~~~~-~~~iia~~~ 104 (141)
T 3llv_A 80 D--DEFNLKILKALRSVS-DVYAIVRVS 104 (141)
T ss_dssp C--HHHHHHHHHHHHHHC-CCCEEEEES
T ss_pred C--HHHHHHHHHHHHHhC-CceEEEEEc
Confidence 1 122234445555555 556655544
No 403
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=48.85 E-value=60 Score=30.06 Aligned_cols=85 Identities=20% Similarity=0.103 Sum_probs=51.9
Q ss_pred eEEEeCCCC-c-hHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEcccccccccc
Q 012571 219 SVLDVGCGF-G-SFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKK 296 (460)
Q Consensus 219 ~VLDIGCGt-G-~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~d 296 (460)
+|.=||+|. | .++..|.+.+ .+|+++|.+++.++.+.+.+...... .+.... ...|+|+..- -. ..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~----~~~D~vi~av--~~--~~ 69 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRG---HYLIGVSRQQSTCEKAVERQLVDEAG-QDLSLL----QTAKIIFLCT--PI--QL 69 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHHTTSCSEEE-SCGGGG----TTCSEEEECS--CH--HH
T ss_pred EEEEEcCcHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHhCCCCcccc-CCHHHh----CCCCEEEEEC--CH--HH
Confidence 466688764 2 2444555555 47888999998888777666542211 112222 3579998762 11 23
Q ss_pred HHHHHHHHHHhcCCCcEEE
Q 012571 297 EGIFLIEADRLLKPGGYFV 315 (460)
Q Consensus 297 ~~~~L~ei~RvLkPGG~lv 315 (460)
...++.++...++||..++
T Consensus 70 ~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 70 ILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp HHHHHHHHGGGSCTTCEEE
T ss_pred HHHHHHHHHhhCCCCCEEE
Confidence 3457788888888887554
No 404
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=47.34 E-value=11 Score=37.43 Aligned_cols=98 Identities=16% Similarity=0.133 Sum_probs=52.2
Q ss_pred CCeEEEeCCCC-chHHHHHHh-ccCceeEEEEeeCCHHHHHHHHH-cCCCeEEEeecccCCCCCCCCccEEEEccccccc
Q 012571 217 VQSVLDVGCGF-GSFGAHLVS-LKLMAVCVAVYEATGSQVQLALE-RGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIW 293 (460)
Q Consensus 217 ~~~VLDIGCGt-G~~a~~La~-~g~~~~~v~giD~s~~~l~~A~~-rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~ 293 (460)
..+|+=+|+|. |..+..++. .| .+|+.+|.+++..+.+.+ .+..+.....+...+.-.-..+|+|+.+-. ..-
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~G---a~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g-~~~ 241 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMG---AQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVL-VPG 241 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC----
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCC-CCc
Confidence 37899999852 333333332 34 578999999988777655 344422211111111000125799987532 111
Q ss_pred cccHHHHHHHHHHhcCCCcEEEEEe
Q 012571 294 DKKEGIFLIEADRLLKPGGYFVLTS 318 (460)
Q Consensus 294 ~~d~~~~L~ei~RvLkPGG~lvl~~ 318 (460)
...+..+.+++.+.+||||.++...
T Consensus 242 ~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 242 AKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp ----CCSCHHHHTTSCTTCEEEECC
T ss_pred cccchhHHHHHHHhhcCCCEEEEEe
Confidence 0111113567778899999887654
No 405
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=46.63 E-value=15 Score=37.10 Aligned_cols=95 Identities=16% Similarity=0.097 Sum_probs=56.1
Q ss_pred CCeEEEeCCCC-chHHHHHHhc-cCceeEEEEeeCCHHHHHHHHHcCCCeEEEeec---------c------------cC
Q 012571 217 VQSVLDVGCGF-GSFGAHLVSL-KLMAVCVAVYEATGSQVQLALERGLPAMIGNFI---------S------------RQ 273 (460)
Q Consensus 217 ~~~VLDIGCGt-G~~a~~La~~-g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d---------~------------~~ 273 (460)
..+|+=+|+|. |..+..++.. | ..|+++|.+++..+.+.+.|..+ ...+ . ..
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lG---a~V~v~D~~~~~l~~~~~lGa~~--~~l~~~~~~~~gya~~~~~~~~~~~~~~ 258 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLG---AKTTGYDVRPEVAEQVRSVGAQW--LDLGIDAAGEGGYARELSEAERAQQQQA 258 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHT---CEEEEECSSGGGHHHHHHTTCEE--CCCC-------------CHHHHHHHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHcCCeE--EeccccccccccchhhhhHHHHhhhHHH
Confidence 46899999984 4444444443 4 57899999998888887755432 1110 0 00
Q ss_pred CCCCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEE
Q 012571 274 LPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLT 317 (460)
Q Consensus 274 Lp~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~ 317 (460)
+.-.-...|+|+.+- +..-...+..+-+++.+.+|||+.++=.
T Consensus 259 l~e~l~~aDIVI~tv-~iPg~~ap~Lvt~emv~~MkpGsVIVDv 301 (381)
T 3p2y_A 259 LEDAITKFDIVITTA-LVPGRPAPRLVTAAAATGMQPGSVVVDL 301 (381)
T ss_dssp HHHHHTTCSEEEECC-CCTTSCCCCCBCHHHHHTSCTTCEEEET
T ss_pred HHHHHhcCCEEEECC-CCCCcccceeecHHHHhcCCCCcEEEEE
Confidence 000015689999752 2222112222346888999999877644
No 406
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=45.51 E-value=1.3e+02 Score=29.59 Aligned_cols=93 Identities=11% Similarity=-0.022 Sum_probs=55.0
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHH--HH-HHHHcCCC---eEEEeecccCCCCCCCCccEEEEccccc
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQ--VQ-LALERGLP---AMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~--l~-~A~~rgl~---~~~~~~d~~~Lp~~~~sFDlVvs~~~l~ 291 (460)
.+||.||.+.|.++..|+..++ ..+ .|.--.. .+ -+...++. +.+.. .+.-..+.||+|+... -
T Consensus 40 ~~~~~~~d~~gal~~~~~~~~~--~~~--~ds~~~~~~~~~n~~~~~~~~~~~~~~~----~~~~~~~~~~~v~~~l--p 109 (375)
T 4dcm_A 40 GPVLILNDAFGALSCALAEHKP--YSI--GDSYISELATRENLRLNGIDESSVKFLD----STADYPQQPGVVLIKV--P 109 (375)
T ss_dssp SCEEEECCSSSHHHHHTGGGCC--EEE--ESCHHHHHHHHHHHHHTTCCGGGSEEEE----TTSCCCSSCSEEEEEC--C
T ss_pred CCEEEECCCCCHHHHhhccCCc--eEE--EhHHHHHHHHHHHHHHcCCCccceEecc----cccccccCCCEEEEEc--C
Confidence 5799999999999998876543 222 2422221 11 11223443 23322 1222346799988642 1
Q ss_pred cccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 292 IWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 292 ~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
--.......|.++...|+||+.+++....
T Consensus 110 k~~~~l~~~L~~l~~~l~~~~~i~~~g~~ 138 (375)
T 4dcm_A 110 KTLALLEQQLRALRKVVTSDTRIIAGAKA 138 (375)
T ss_dssp SCHHHHHHHHHHHHTTCCTTSEEEEEEEG
T ss_pred CCHHHHHHHHHHHHhhCCCCCEEEEEecc
Confidence 11133445788899999999999877653
No 407
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=44.76 E-value=80 Score=29.43 Aligned_cols=93 Identities=13% Similarity=0.174 Sum_probs=54.8
Q ss_pred CeEEEeCCCC-c-hHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEE------ee---cccCCCCCCCCccEEEE
Q 012571 218 QSVLDVGCGF-G-SFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIG------NF---ISRQLPYPSLSFDMVHC 286 (460)
Q Consensus 218 ~~VLDIGCGt-G-~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~------~~---d~~~Lp~~~~sFDlVvs 286 (460)
.+|.=||+|. | .++..|++.| .+|+.+|.+++.++..++.+...... .. +..++.-.-...|+|+.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 80 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGG---NDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIA 80 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHhCC---CcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEE
Confidence 4688899874 3 3455555555 47888999998888777666432210 00 11111100026899987
Q ss_pred ccccccccccHHHHHHHHHHhcCCCcEEEEE
Q 012571 287 AQCGIIWDKKEGIFLIEADRLLKPGGYFVLT 317 (460)
Q Consensus 287 ~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~ 317 (460)
.- -. .....++.++...++||..++..
T Consensus 81 ~v--~~--~~~~~v~~~l~~~l~~~~~iv~~ 107 (316)
T 2ew2_A 81 LT--KA--QQLDAMFKAIQPMITEKTYVLCL 107 (316)
T ss_dssp CS--CH--HHHHHHHHHHGGGCCTTCEEEEC
T ss_pred Ee--cc--ccHHHHHHHHHHhcCCCCEEEEe
Confidence 62 11 23455788888888887765544
No 408
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=44.43 E-value=57 Score=30.94 Aligned_cols=89 Identities=16% Similarity=0.097 Sum_probs=51.3
Q ss_pred CeEEEeCCCC-c-hHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEccccccccc
Q 012571 218 QSVLDVGCGF-G-SFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDK 295 (460)
Q Consensus 218 ~~VLDIGCGt-G-~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~ 295 (460)
.+|.=||+|. | .++..|++.| ..|+.+|.+++.++.+.+.+..... .+..+. -...|+|+..- .-..
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G---~~V~~~dr~~~~~~~~~~~g~~~~~--~~~~e~---~~~aDvvi~~v---p~~~ 76 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAG---LSTWGADLNPQACANLLAEGACGAA--ASAREF---AGVVDALVILV---VNAA 76 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHHTTCSEEE--SSSTTT---TTTCSEEEECC---SSHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCC---CeEEEEECCHHHHHHHHHcCCcccc--CCHHHH---HhcCCEEEEEC---CCHH
Confidence 5788888774 2 3455556666 5788999999988888777654311 111111 13468888752 1101
Q ss_pred cHHHHH---HHHHHhcCCCcEEEEE
Q 012571 296 KEGIFL---IEADRLLKPGGYFVLT 317 (460)
Q Consensus 296 d~~~~L---~ei~RvLkPGG~lvl~ 317 (460)
....++ +++...|+||..++-.
T Consensus 77 ~~~~v~~~~~~l~~~l~~g~ivv~~ 101 (303)
T 3g0o_A 77 QVRQVLFGEDGVAHLMKPGSAVMVS 101 (303)
T ss_dssp HHHHHHC--CCCGGGSCTTCEEEEC
T ss_pred HHHHHHhChhhHHhhCCCCCEEEec
Confidence 122333 4556677777665533
No 409
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=42.76 E-value=1.1e+02 Score=28.33 Aligned_cols=89 Identities=19% Similarity=0.139 Sum_probs=52.8
Q ss_pred eEEEeCCCC-c-hHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCC-CccEEEEccccccccc
Q 012571 219 SVLDVGCGF-G-SFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSL-SFDMVHCAQCGIIWDK 295 (460)
Q Consensus 219 ~VLDIGCGt-G-~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~-sFDlVvs~~~l~~~~~ 295 (460)
+|.=||+|. | .++..|.+.|. ..+|+++|.+++.++.+++.|...... .+.... -. ..|+|+..- .. .
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~-~~~V~~~d~~~~~~~~~~~~g~~~~~~-~~~~~~---~~~~aDvVilav---p~-~ 73 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGF-KGKIYGYDINPESISKAVDLGIIDEGT-TSIAKV---EDFSPDFVMLSS---PV-R 73 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTC-CSEEEEECSCHHHHHHHHHTTSCSEEE-SCGGGG---GGTCCSEEEECS---CH-H
T ss_pred EEEEEecCHHHHHHHHHHHhcCC-CcEEEEEeCCHHHHHHHHHCCCccccc-CCHHHH---hcCCCCEEEEcC---CH-H
Confidence 577788764 2 34455555553 137889999999888887766542211 111111 12 579988752 11 1
Q ss_pred cHHHHHHHHHHhcCCCcEEEE
Q 012571 296 KEGIFLIEADRLLKPGGYFVL 316 (460)
Q Consensus 296 d~~~~L~ei~RvLkPGG~lvl 316 (460)
....++.++...+++|..++.
T Consensus 74 ~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 74 TFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp HHHHHHHHHHHHSCTTCEEEE
T ss_pred HHHHHHHHHHhhCCCCcEEEE
Confidence 233577888888999875554
No 410
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=42.71 E-value=54 Score=34.11 Aligned_cols=87 Identities=18% Similarity=0.056 Sum_probs=54.4
Q ss_pred CeEEEeCCCC-chHHHHHHhc-cCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEccccccccc
Q 012571 218 QSVLDVGCGF-GSFGAHLVSL-KLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDK 295 (460)
Q Consensus 218 ~~VLDIGCGt-G~~a~~La~~-g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~ 295 (460)
.+|+=+|+|. |......++. | ++|+++|.++...+.|++.|.. .... .++ -...|+|+..-...+..
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~G---a~Viv~d~~~~~~~~A~~~Ga~--~~~l--~e~---l~~aDvVi~atgt~~~i- 343 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQG---ARVSVTEIDPINALQAMMEGFD--VVTV--EEA---IGDADIVVTATGNKDII- 343 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHHTTCE--ECCH--HHH---GGGCSEEEECSSSSCSB-
T ss_pred CEEEEEccCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHcCCE--EecH--HHH---HhCCCEEEECCCCHHHH-
Confidence 7899999863 3333333332 4 5899999999888888777753 2222 111 13579998763222221
Q ss_pred cHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 296 KEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 296 d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
-.+..+.+||||+++.....
T Consensus 344 -----~~~~l~~mk~ggilvnvG~~ 363 (494)
T 3ce6_A 344 -----MLEHIKAMKDHAILGNIGHF 363 (494)
T ss_dssp -----CHHHHHHSCTTCEEEECSSS
T ss_pred -----HHHHHHhcCCCcEEEEeCCC
Confidence 12566789999999887653
No 411
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=42.69 E-value=1.4e+02 Score=27.11 Aligned_cols=101 Identities=17% Similarity=0.096 Sum_probs=58.8
Q ss_pred CeEEEeCCCCch---HHHHHHhccCceeEEEEeeCCHHHHHHHHHc-CCCeEEEeecccCCCC----------CCCCccE
Q 012571 218 QSVLDVGCGFGS---FGAHLVSLKLMAVCVAVYEATGSQVQLALER-GLPAMIGNFISRQLPY----------PSLSFDM 283 (460)
Q Consensus 218 ~~VLDIGCGtG~---~a~~La~~g~~~~~v~giD~s~~~l~~A~~r-gl~~~~~~~d~~~Lp~----------~~~sFDl 283 (460)
+++|=.|++.|. .+..|+++| .+|+.+|.+++.++...+. +..+.+...|..+..- .-+..|+
T Consensus 9 k~~lVTGas~gIG~a~a~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 85 (255)
T 4eso_A 9 KKAIVIGGTHGMGLATVRRLVEGG---AEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL 85 (255)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 678888877653 556666666 5788888888776654433 4455555555433210 0146898
Q ss_pred EEEcccccccc-------ccHH-----------HHHHHHHHhcCCCcEEEEEeCCC
Q 012571 284 VHCAQCGIIWD-------KKEG-----------IFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 284 Vvs~~~l~~~~-------~d~~-----------~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
++.+-...... ++++ .+.+.+...++.+|.++......
T Consensus 86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~ 141 (255)
T 4eso_A 86 LHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVA 141 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGG
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChh
Confidence 88764332211 1111 13455666777789888776543
No 412
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=42.51 E-value=1.1e+02 Score=31.30 Aligned_cols=90 Identities=20% Similarity=0.194 Sum_probs=54.5
Q ss_pred CCeEEEeCCCC-c-hHHHHHHhccCceeEEEEeeCCHHHHHHHHHc-----------CC---------CeEEEeecccCC
Q 012571 217 VQSVLDVGCGF-G-SFGAHLVSLKLMAVCVAVYEATGSQVQLALER-----------GL---------PAMIGNFISRQL 274 (460)
Q Consensus 217 ~~~VLDIGCGt-G-~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r-----------gl---------~~~~~~~d~~~L 274 (460)
..+|.=||+|. | .++..++..| ..|+.+|.+++.++.+++. +. ...+ ..+.+.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G---~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~- 111 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVG---ISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKE- 111 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTT---CEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGG-
T ss_pred CCEEEEECcCHHHHHHHHHHHhCC---CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHH-
Confidence 36799999986 3 3566666666 4788999999887765431 10 0111 111111
Q ss_pred CCCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEE
Q 012571 275 PYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVL 316 (460)
Q Consensus 275 p~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl 316 (460)
-...|+|+.+- .... +-...++.++...++||..++.
T Consensus 112 ---~~~aDlVIeaV-pe~~-~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 112 ---LSTVDLVVEAV-FEDM-NLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp ---GTTCSEEEECC-CSCH-HHHHHHHHHHHHHSCTTCEEEE
T ss_pred ---HCCCCEEEEcC-CCCH-HHHHHHHHHHHhhCCCCeEEEe
Confidence 13579988762 1111 1124578889999999877664
No 413
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=42.32 E-value=18 Score=35.27 Aligned_cols=90 Identities=21% Similarity=0.153 Sum_probs=51.5
Q ss_pred CeEEEeCC--CCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCC-----CCCCCccEEEEcccc
Q 012571 218 QSVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP-----YPSLSFDMVHCAQCG 290 (460)
Q Consensus 218 ~~VLDIGC--GtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp-----~~~~sFDlVvs~~~l 290 (460)
.+||=+|+ |.|.++..+++... ...+++++ +++..+.++ .|....+. ...++. ...+.+|+|+-.-.
T Consensus 144 ~~VlV~Ga~G~vG~~a~qla~~~g-~~~V~~~~-~~~~~~~~~-~ga~~~~~--~~~~~~~~~~~~~~~g~Dvv~d~~g- 217 (349)
T 4a27_A 144 MSVLVHSAGGGVGQAVAQLCSTVP-NVTVFGTA-STFKHEAIK-DSVTHLFD--RNADYVQEVKRISAEGVDIVLDCLC- 217 (349)
T ss_dssp CEEEESSTTSHHHHHHHHHHTTST-TCEEEEEE-CGGGHHHHG-GGSSEEEE--TTSCHHHHHHHHCTTCEEEEEEECC-
T ss_pred CEEEEEcCCcHHHHHHHHHHHHcC-CcEEEEeC-CHHHHHHHH-cCCcEEEc--CCccHHHHHHHhcCCCceEEEECCC-
Confidence 78999997 35777788876521 25677777 455556665 55543332 111110 12357999986521
Q ss_pred ccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 291 ~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
. ..+.+..+.|+|||.+++....
T Consensus 218 -----~--~~~~~~~~~l~~~G~~v~~G~~ 240 (349)
T 4a27_A 218 -----G--DNTGKGLSLLKPLGTYILYGSS 240 (349)
T ss_dssp --------------CTTEEEEEEEEEEC--
T ss_pred -----c--hhHHHHHHHhhcCCEEEEECCC
Confidence 1 1236788999999999988653
No 414
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=39.86 E-value=98 Score=28.87 Aligned_cols=84 Identities=15% Similarity=0.056 Sum_probs=51.8
Q ss_pred CeEEEeCC-CC-c-hHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEcccccccc
Q 012571 218 QSVLDVGC-GF-G-SFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWD 294 (460)
Q Consensus 218 ~~VLDIGC-Gt-G-~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~ 294 (460)
.+|.=||+ |. | .++..|.+.| .+|+.+|.+++..+.+.+.++... +..+ .-...|+|+..- -.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g---~~V~~~~r~~~~~~~~~~~g~~~~----~~~~---~~~~aDvVi~av--~~-- 77 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSA---HHLAAIEIAPEGRDRLQGMGIPLT----DGDG---WIDEADVVVLAL--PD-- 77 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSS---SEEEEECCSHHHHHHHHHTTCCCC----CSSG---GGGTCSEEEECS--CH--
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC---CEEEEEECCHHHHHHHHhcCCCcC----CHHH---HhcCCCEEEEcC--Cc--
Confidence 47888998 74 3 3555566655 478889999988877766553321 1111 113579998752 11
Q ss_pred ccHHHHHHHHHHhcCCCcEEE
Q 012571 295 KKEGIFLIEADRLLKPGGYFV 315 (460)
Q Consensus 295 ~d~~~~L~ei~RvLkPGG~lv 315 (460)
.....++.++...++||..++
T Consensus 78 ~~~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 78 NIIEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp HHHHHHHHHHGGGSCTTCEEE
T ss_pred hHHHHHHHHHHHhCCCCCEEE
Confidence 123457788888888876544
No 415
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=39.27 E-value=1.2e+02 Score=28.85 Aligned_cols=93 Identities=17% Similarity=0.110 Sum_probs=56.8
Q ss_pred CeEEEeCCCC-c-hHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEe------ec-ccCCCCCCCCccEEEEcc
Q 012571 218 QSVLDVGCGF-G-SFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGN------FI-SRQLPYPSLSFDMVHCAQ 288 (460)
Q Consensus 218 ~~VLDIGCGt-G-~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~------~d-~~~Lp~~~~sFDlVvs~~ 288 (460)
.+|.=||+|. | .++..|++.| ..|+.+ .+++.++..++.++...... .. ..+.. .-..+|+|+..-
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~G---~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~D~vilav 94 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARAG---HEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPS-AVQGADLVLFCV 94 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT---CEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGG-GGTTCSEEEECC
T ss_pred CcEEEECcCHHHHHHHHHHHHCC---CeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHH-HcCCCCEEEEEc
Confidence 6789998884 3 3556666665 467777 78888887777664332100 00 01111 124689998752
Q ss_pred ccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 289 CGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 289 ~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
-. .+...+++++...++|+..++....
T Consensus 95 --k~--~~~~~~l~~l~~~l~~~~~iv~~~n 121 (318)
T 3hwr_A 95 --KS--TDTQSAALAMKPALAKSALVLSLQN 121 (318)
T ss_dssp --CG--GGHHHHHHHHTTTSCTTCEEEEECS
T ss_pred --cc--ccHHHHHHHHHHhcCCCCEEEEeCC
Confidence 22 2445688999999999877665544
No 416
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=35.83 E-value=76 Score=32.02 Aligned_cols=41 Identities=15% Similarity=0.017 Sum_probs=31.4
Q ss_pred CeEEEeCCCCchHHHHHHhccCce----eEEEEeeCCHHHHHHHH
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMA----VCVAVYEATGSQVQLAL 258 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~----~~v~giD~s~~~l~~A~ 258 (460)
.+|||+=||.|.+...|.+.|... ..+.++|+++..++.-+
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~ 55 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYV 55 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHH
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHH
Confidence 589999999999999998876321 23778999997776443
No 417
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=35.51 E-value=47 Score=32.28 Aligned_cols=92 Identities=12% Similarity=0.057 Sum_probs=53.5
Q ss_pred CeEEEeCC--CCchHHHHHHhccCceeEEEEeeCCH----HHHHHHHHcCCCeEEEeecc--cCCC-----C---CCCCc
Q 012571 218 QSVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATG----SQVQLALERGLPAMIGNFIS--RQLP-----Y---PSLSF 281 (460)
Q Consensus 218 ~~VLDIGC--GtG~~a~~La~~g~~~~~v~giD~s~----~~l~~A~~rgl~~~~~~~d~--~~Lp-----~---~~~sF 281 (460)
.+||=+|+ |.|.++..+++... .+++++..+. +..+.+++.|....+..-+. .++. . ..+.+
T Consensus 169 ~~VlV~Ga~G~vG~~aiqlak~~G--a~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g~ 246 (364)
T 1gu7_A 169 DWFIQNGGTSAVGKYASQIGKLLN--FNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEA 246 (364)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHHT--CEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCE
T ss_pred cEEEECCCCcHHHHHHHHHHHHCC--CEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccCCCc
Confidence 68998886 46778888887521 3555554332 23556666676544332110 1110 0 12469
Q ss_pred cEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 282 DMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 282 DlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
|+|+-.-. . ..+. +..+.|++||.++....
T Consensus 247 Dvvid~~G------~-~~~~-~~~~~l~~~G~~v~~g~ 276 (364)
T 1gu7_A 247 KLALNCVG------G-KSST-GIARKLNNNGLMLTYGG 276 (364)
T ss_dssp EEEEESSC------H-HHHH-HHHHTSCTTCEEEECCC
T ss_pred eEEEECCC------c-hhHH-HHHHHhccCCEEEEecC
Confidence 99986531 1 1233 67899999999988764
No 418
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=35.18 E-value=1.6e+02 Score=30.48 Aligned_cols=86 Identities=14% Similarity=0.033 Sum_probs=52.5
Q ss_pred CeEEEeCCCCc---hHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEcccccccc
Q 012571 218 QSVLDVGCGFG---SFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWD 294 (460)
Q Consensus 218 ~~VLDIGCGtG---~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~ 294 (460)
++|+=+|+| | ..+..|+..| .+|+.+|.++.....+...+. ... +.... ...+|+|+......+..
T Consensus 266 KtVvVtGaG-gIG~aiA~~Laa~G---A~Viv~D~~~~~a~~Aa~~g~--dv~--~lee~---~~~aDvVi~atG~~~vl 334 (488)
T 3ond_A 266 KVAVVAGYG-DVGKGCAAALKQAG---ARVIVTEIDPICALQATMEGL--QVL--TLEDV---VSEADIFVTTTGNKDII 334 (488)
T ss_dssp CEEEEECCS-HHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHHTTC--EEC--CGGGT---TTTCSEEEECSSCSCSB
T ss_pred CEEEEECCC-HHHHHHHHHHHHCC---CEEEEEcCCHHHHHHHHHhCC--ccC--CHHHH---HHhcCEEEeCCCChhhh
Confidence 789999987 3 1334444445 578889999887776666553 222 12221 24589888754333332
Q ss_pred ccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 295 KKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 295 ~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
-.+..+.+|+|+.++-....
T Consensus 335 ------~~e~l~~mk~gaiVvNaG~~ 354 (488)
T 3ond_A 335 ------MLDHMKKMKNNAIVCNIGHF 354 (488)
T ss_dssp ------CHHHHTTSCTTEEEEESSST
T ss_pred ------hHHHHHhcCCCeEEEEcCCC
Confidence 23457789999988766553
No 419
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=34.44 E-value=84 Score=25.54 Aligned_cols=77 Identities=13% Similarity=-0.003 Sum_probs=44.8
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEccccccccccH
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKKE 297 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~d~ 297 (460)
.+||=+ |+.|..+..|+++ |-+.|.++|+++.+.........-.-+.||+|+.. +..
T Consensus 7 mkIlL~-C~aGmSTsllv~k---------------m~~~a~~~gi~v~i~a~~~~~~~~~~~~~DvvLLg-------PQV 63 (108)
T 3nbm_A 7 LKVLVL-CAGSGTSAQLANA---------------INEGANLTEVRVIANSGAYGAHYDIMGVYDLIILA-------PQV 63 (108)
T ss_dssp EEEEEE-ESSSSHHHHHHHH---------------HHHHHHHHTCSEEEEEEETTSCTTTGGGCSEEEEC-------GGG
T ss_pred ceEEEE-CCCCCCHHHHHHH---------------HHHHHHHCCCceEEEEcchHHHHhhccCCCEEEEC-------hHH
Confidence 456643 6666555556543 56678888998887543333333223459999975 222
Q ss_pred HHHHHHHHHhcCCCcEEEEE
Q 012571 298 GIFLIEADRLLKPGGYFVLT 317 (460)
Q Consensus 298 ~~~L~ei~RvLkPGG~lvl~ 317 (460)
.-.+.++.....+-|.=+..
T Consensus 64 ~y~~~~ik~~~~~~~ipV~v 83 (108)
T 3nbm_A 64 RSYYREMKVDAERLGIQIVA 83 (108)
T ss_dssp GGGHHHHHHHHTTTTCEEEE
T ss_pred HHHHHHHHHHhhhcCCcEEE
Confidence 23456666667665654433
No 420
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=33.90 E-value=45 Score=31.41 Aligned_cols=89 Identities=16% Similarity=0.082 Sum_probs=52.1
Q ss_pred CeEEEeCCCC--chHHHHHHhccCceeEEEEeeCCHHHHHHHHHc-------------CCC----------eEEEeeccc
Q 012571 218 QSVLDVGCGF--GSFGAHLVSLKLMAVCVAVYEATGSQVQLALER-------------GLP----------AMIGNFISR 272 (460)
Q Consensus 218 ~~VLDIGCGt--G~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r-------------gl~----------~~~~~~d~~ 272 (460)
.+|.=||+|. +.++..++..| ..|+.+|.+++.++.+.+. ++. +... .+..
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G---~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~-~~~~ 80 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHG---FAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYS-DDLA 80 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEE-SCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEe-CCHH
Confidence 5677788774 23455555556 5788999999988776554 111 1111 1111
Q ss_pred CCCCCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEE
Q 012571 273 QLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFV 315 (460)
Q Consensus 273 ~Lp~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lv 315 (460)
+. -...|+|+.+- -... +....++.++...++|+..++
T Consensus 81 ~~---~~~aDlVi~av-~~~~-~~~~~v~~~l~~~~~~~~il~ 118 (283)
T 4e12_A 81 QA---VKDADLVIEAV-PESL-DLKRDIYTKLGELAPAKTIFA 118 (283)
T ss_dssp HH---TTTCSEEEECC-CSCH-HHHHHHHHHHHHHSCTTCEEE
T ss_pred HH---hccCCEEEEec-cCcH-HHHHHHHHHHHhhCCCCcEEE
Confidence 10 13479988762 1111 123457889999999987654
No 421
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=33.51 E-value=66 Score=34.18 Aligned_cols=71 Identities=20% Similarity=0.285 Sum_probs=45.9
Q ss_pred CCCCCCCCccEEEEc----ccccccc--ccH----HHHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHH
Q 012571 273 QLPYPSLSFDMVHCA----QCGIIWD--KKE----GIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEF 342 (460)
Q Consensus 273 ~Lp~~~~sFDlVvs~----~~l~~~~--~d~----~~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l 342 (460)
.+| +++.||+|+++ +-.+|+. +|. ..+-....+.|+|||.+++..-... ++..-..+..+
T Consensus 215 G~p-~~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YGyA---------Dr~sE~vv~al 284 (670)
T 4gua_A 215 GFP-PQARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYGYA---------DRNSEDVVTAL 284 (670)
T ss_dssp CCC-CCCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCC---------SHHHHHHHHHH
T ss_pred CCC-CCCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEeecc---------ccchHHHHHHH
Confidence 355 35689999996 2234442 222 2244567889999999999987553 23444566778
Q ss_pred HHHhCeEEEee
Q 012571 343 TEKICWSLIAQ 353 (460)
Q Consensus 343 ~~~~~w~~~~~ 353 (460)
+++..+..+.+
T Consensus 285 aRkF~~~rv~~ 295 (670)
T 4gua_A 285 ARKFVRVSAAR 295 (670)
T ss_dssp HHTEEEEEEEC
T ss_pred HhheeeeeeeC
Confidence 87766666554
No 422
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=32.92 E-value=2.5e+02 Score=30.36 Aligned_cols=44 Identities=14% Similarity=0.012 Sum_probs=32.9
Q ss_pred CCeEEEeCCCCchHHHHHHhccC----ceeEEEEeeCCHHHHHHHHHc
Q 012571 217 VQSVLDVGCGFGSFGAHLVSLKL----MAVCVAVYEATGSQVQLALER 260 (460)
Q Consensus 217 ~~~VLDIGCGtG~~a~~La~~g~----~~~~v~giD~s~~~l~~A~~r 260 (460)
..+|||+=||.|.++.-|.+.|. ....+.++|+++..++.-+.+
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~N 259 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYN 259 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHH
T ss_pred CCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHH
Confidence 36899999999999988876641 113467899999888765554
No 423
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=32.31 E-value=2.2e+02 Score=29.22 Aligned_cols=90 Identities=11% Similarity=-0.050 Sum_probs=53.5
Q ss_pred CCeEEEeCCCC--chHHHHHHhccCceeEEEEeeCCHHH--------HHHHHHcCC-C----------eEEEeecccCCC
Q 012571 217 VQSVLDVGCGF--GSFGAHLVSLKLMAVCVAVYEATGSQ--------VQLALERGL-P----------AMIGNFISRQLP 275 (460)
Q Consensus 217 ~~~VLDIGCGt--G~~a~~La~~g~~~~~v~giD~s~~~--------l~~A~~rgl-~----------~~~~~~d~~~Lp 275 (460)
..+|-=||+|+ +.++..+++.| ..|+.+|.+++. ++.+.+++. . +.+. .+.+.
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~aG---~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t-~dl~a-- 127 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLAG---IETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKIT-SDFHK-- 127 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEE-SCGGG--
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEe-CCHHH--
Confidence 46788899986 44667777776 578999999872 222333332 1 1111 11211
Q ss_pred CCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEE
Q 012571 276 YPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVL 316 (460)
Q Consensus 276 ~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl 316 (460)
-...|+|+.+- .... +-...++.++...++||..+..
T Consensus 128 --l~~aDlVIeAV-pe~~-~vk~~v~~~l~~~~~~~aIlas 164 (460)
T 3k6j_A 128 --LSNCDLIVESV-IEDM-KLKKELFANLENICKSTCIFGT 164 (460)
T ss_dssp --CTTCSEEEECC-CSCH-HHHHHHHHHHHTTSCTTCEEEE
T ss_pred --HccCCEEEEcC-CCCH-HHHHHHHHHHHhhCCCCCEEEe
Confidence 23479988762 1111 1123578999999999887754
No 424
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=31.99 E-value=36 Score=32.79 Aligned_cols=66 Identities=18% Similarity=0.165 Sum_probs=40.9
Q ss_pred CCCccEEEEcc----cccccc--ccHH----HHHHHHHHhcCCCcEEEEEeCCCCCCCCCCchhhhHHHHHHHHHHHHhC
Q 012571 278 SLSFDMVHCAQ----CGIIWD--KKEG----IFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKIC 347 (460)
Q Consensus 278 ~~sFDlVvs~~----~l~~~~--~d~~----~~L~ei~RvLkPGG~lvl~~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~ 347 (460)
-+.||+|+++- -.+|+. +|.. .+-....+.|+|||.+++..-... ++..-..+..++++..
T Consensus 209 ~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyA---------DR~SE~vV~alARkF~ 279 (324)
T 3trk_A 209 LGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYA---------DRTSERVICVLGRKFR 279 (324)
T ss_dssp GCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCC---------SHHHHHHHHHHHTTEE
T ss_pred CCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeeccc---------ccchHHHHHHHHhhhe
Confidence 37899999962 233442 2222 244567789999999999987553 2344455667776544
Q ss_pred eEEEe
Q 012571 348 WSLIA 352 (460)
Q Consensus 348 w~~~~ 352 (460)
+..+.
T Consensus 280 ~~rv~ 284 (324)
T 3trk_A 280 SSRAL 284 (324)
T ss_dssp EEEEE
T ss_pred eeeee
Confidence 44433
No 425
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=30.68 E-value=2e+02 Score=26.70 Aligned_cols=69 Identities=13% Similarity=0.077 Sum_probs=45.7
Q ss_pred CeEEEeCCCCch---HHHHHHhccCceeEEEEeeCC--HHHHHHHHHcCCCeEEEeecccCCC-----CCCCCccEEEEc
Q 012571 218 QSVLDVGCGFGS---FGAHLVSLKLMAVCVAVYEAT--GSQVQLALERGLPAMIGNFISRQLP-----YPSLSFDMVHCA 287 (460)
Q Consensus 218 ~~VLDIGCGtG~---~a~~La~~g~~~~~v~giD~s--~~~l~~A~~rgl~~~~~~~d~~~Lp-----~~~~sFDlVvs~ 287 (460)
+++|=-|.+.|. .+..|+++|. +|+..|.+ ++..+..++.+..+.....|..+-. +..+..|+++.+
T Consensus 10 KvalVTGas~GIG~aiA~~la~~Ga---~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNN 86 (247)
T 4hp8_A 10 RKALVTGANTGLGQAIAVGLAAAGA---EVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNN 86 (247)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEEC
T ss_pred CEEEEeCcCCHHHHHHHHHHHHcCC---EEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence 678888888774 6677777774 55555544 5566666677777776666543321 345779999986
Q ss_pred cc
Q 012571 288 QC 289 (460)
Q Consensus 288 ~~ 289 (460)
-.
T Consensus 87 AG 88 (247)
T 4hp8_A 87 AG 88 (247)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 426
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=29.82 E-value=16 Score=35.95 Aligned_cols=65 Identities=18% Similarity=0.080 Sum_probs=36.5
Q ss_pred CCeEEEeCCC-CchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccC---CCCCCCCccEEEEc
Q 012571 217 VQSVLDVGCG-FGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQ---LPYPSLSFDMVHCA 287 (460)
Q Consensus 217 ~~~VLDIGCG-tG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~---Lp~~~~sFDlVvs~ 287 (460)
..+||=+||| +|......+.+. ..++..|.+...++.+++.. ....+|..+ +.-.-...|+|++.
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~~---~~v~~~~~~~~~~~~~~~~~---~~~~~d~~d~~~l~~~~~~~DvVi~~ 84 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKDE---FDVYIGDVNNENLEKVKEFA---TPLKVDASNFDKLVEVMKEFELVIGA 84 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT---SEEEEEESCHHHHHHHTTTS---EEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred ccEEEEECCCHHHHHHHHHHhcC---CCeEEEEcCHHHHHHHhccC---CcEEEecCCHHHHHHHHhCCCEEEEe
Confidence 3789999985 344433333333 46777899998887775432 112222221 11011357998875
No 427
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=29.42 E-value=78 Score=31.23 Aligned_cols=90 Identities=14% Similarity=0.037 Sum_probs=54.2
Q ss_pred CeEEEeCCCC-c-hHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEccccccccc
Q 012571 218 QSVLDVGCGF-G-SFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDK 295 (460)
Q Consensus 218 ~~VLDIGCGt-G-~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~ 295 (460)
.+|.=||+|. | .++..|++.| ..|+++|.+++.++.+.+.++... .+..++--.....|+|+..- .- .
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~G---~~V~v~dr~~~~~~~l~~~g~~~~---~s~~e~~~~a~~~DvVi~~v---p~-~ 92 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKGG---HECVVYDLNVNAVQALEREGIAGA---RSIEEFCAKLVKPRVVWLMV---PA-A 92 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHTTTCBCC---SSHHHHHHHSCSSCEEEECS---CG-G
T ss_pred CEEEEECchHHHHHHHHHHHhCC---CEEEEEeCCHHHHHHHHHCCCEEe---CCHHHHHhcCCCCCEEEEeC---CH-H
Confidence 5788888773 2 3455566666 578899999998887776654321 01111100012358888752 11 1
Q ss_pred cHHHHHHHHHHhcCCCcEEEEE
Q 012571 296 KEGIFLIEADRLLKPGGYFVLT 317 (460)
Q Consensus 296 d~~~~L~ei~RvLkPGG~lvl~ 317 (460)
....++.++...|++|..++-.
T Consensus 93 ~v~~vl~~l~~~l~~g~iiId~ 114 (358)
T 4e21_A 93 VVDSMLQRMTPLLAANDIVIDG 114 (358)
T ss_dssp GHHHHHHHHGGGCCTTCEEEEC
T ss_pred HHHHHHHHHHhhCCCCCEEEeC
Confidence 4456788888889888765543
No 428
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=29.27 E-value=37 Score=34.47 Aligned_cols=98 Identities=13% Similarity=0.081 Sum_probs=56.2
Q ss_pred CCeEEEeCCCC-chHHHHHHhc-cCceeEEEEeeCCHHHHHHHHHcCCCeEEE------ee-----cccCCCCC------
Q 012571 217 VQSVLDVGCGF-GSFGAHLVSL-KLMAVCVAVYEATGSQVQLALERGLPAMIG------NF-----ISRQLPYP------ 277 (460)
Q Consensus 217 ~~~VLDIGCGt-G~~a~~La~~-g~~~~~v~giD~s~~~l~~A~~rgl~~~~~------~~-----d~~~Lp~~------ 277 (460)
..+|+=+|+|. |..+..++.. | ..|+.+|.++..++.+.+.|.++... ++ -...++-+
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lG---a~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~ 266 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLG---AVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQA 266 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCC---CEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhH
Confidence 47899999984 4444554443 4 57899999998888887655432110 00 00001100
Q ss_pred ------CCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012571 278 ------SLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTS 318 (460)
Q Consensus 278 ------~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~ 318 (460)
-...|+|+..- +..-...+..+-+++.+.+|||..++=..
T Consensus 267 ~~l~e~l~~aDVVI~tv-lipg~~ap~Lvt~emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 267 ALVAEHIAKQDIVITTA-LIPGRPAPRLVTREMLDSMKPGSVVVDLA 312 (405)
T ss_dssp HHHHHHHHTCSEEEECC-CCSSSCCCCCBCHHHHTTSCTTCEEEETT
T ss_pred hHHHHHhcCCCEEEECC-cCCCCCCCEEecHHHHhcCCCCCEEEEEe
Confidence 03579998752 22221222223468899999999877543
No 429
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=29.16 E-value=1e+02 Score=28.43 Aligned_cols=85 Identities=15% Similarity=0.074 Sum_probs=50.2
Q ss_pred eEEEeCCCC-ch-HHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEcccccccccc
Q 012571 219 SVLDVGCGF-GS-FGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKK 296 (460)
Q Consensus 219 ~VLDIGCGt-G~-~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~d 296 (460)
+|.=||+|. |. ++..|.+ | .+|+.+|.+++..+...+.+.... . ..+. -...|+|+..- .....
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g---~~V~~~~~~~~~~~~~~~~g~~~~--~--~~~~---~~~~D~vi~~v---~~~~~ 68 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-R---FPTLVWNRTFEKALRHQEEFGSEA--V--PLER---VAEARVIFTCL---PTTRE 68 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-T---SCEEEECSSTHHHHHHHHHHCCEE--C--CGGG---GGGCSEEEECC---SSHHH
T ss_pred eEEEEcccHHHHHHHHHHhC-C---CeEEEEeCCHHHHHHHHHCCCccc--C--HHHH---HhCCCEEEEeC---CChHH
Confidence 467788885 33 4555665 5 357888998887776666554321 1 1111 13579988752 11112
Q ss_pred HHHHHHHHHHhcCCCcEEEEE
Q 012571 297 EGIFLIEADRLLKPGGYFVLT 317 (460)
Q Consensus 297 ~~~~L~ei~RvLkPGG~lvl~ 317 (460)
...++.++...+++|..++..
T Consensus 69 ~~~v~~~l~~~l~~~~~vv~~ 89 (289)
T 2cvz_A 69 VYEVAEALYPYLREGTYWVDA 89 (289)
T ss_dssp HHHHHHHHTTTCCTTEEEEEC
T ss_pred HHHHHHHHHhhCCCCCEEEEC
Confidence 344677787888888765543
No 430
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=28.80 E-value=23 Score=35.28 Aligned_cols=98 Identities=13% Similarity=0.052 Sum_probs=53.1
Q ss_pred CCeEEEeCCCC-chHHHHHHhc-cCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecc-----------cC----------
Q 012571 217 VQSVLDVGCGF-GSFGAHLVSL-KLMAVCVAVYEATGSQVQLALERGLPAMIGNFIS-----------RQ---------- 273 (460)
Q Consensus 217 ~~~VLDIGCGt-G~~a~~La~~-g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~-----------~~---------- 273 (460)
..+|+=+|+|. |..+..++.. | ..|+.+|.++.-.+.+++.|......+.+. ..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~G---a~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~ 248 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLG---AVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA 248 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhH
Confidence 47899999874 4444444443 4 468899998876666665553321000000 00
Q ss_pred --CCCCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012571 274 --LPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTS 318 (460)
Q Consensus 274 --Lp~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~ 318 (460)
+.-.-..+|+|+..- +..-.+.+..+..+..+.+||||.++-..
T Consensus 249 ~~l~~~~~~aDvVi~~~-~~pg~~~~~li~~~~l~~mk~g~vivdva 294 (384)
T 1l7d_A 249 EAVLKELVKTDIAITTA-LIPGKPAPVLITEEMVTKMKPGSVIIDLA 294 (384)
T ss_dssp HHHHHHHTTCSEEEECC-CCTTSCCCCCSCHHHHTTSCTTCEEEETT
T ss_pred HHHHHHhCCCCEEEECC-ccCCCCCCeeeCHHHHhcCCCCCEEEEEe
Confidence 100013589999642 22111121112366778899999987655
No 431
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=28.73 E-value=76 Score=29.83 Aligned_cols=42 Identities=19% Similarity=0.347 Sum_probs=31.1
Q ss_pred CeEEEeCCCC-c-hHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCC
Q 012571 218 QSVLDVGCGF-G-SFGAHLVSLKLMAVCVAVYEATGSQVQLALERGL 262 (460)
Q Consensus 218 ~~VLDIGCGt-G-~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl 262 (460)
.+|.=||+|. | .++..|++.| ..|+.+|.+++.++...+.++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G---~~V~~~d~~~~~~~~~~~~g~ 47 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAG---YLLNVFDLVQSAVDGLVAAGA 47 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT---CEEEEECSSHHHHHHHHHTTC
T ss_pred CEEEEEeecHHHHHHHHHHHhCC---CeEEEEcCCHHHHHHHHHCCC
Confidence 4688889885 3 3566666666 478899999998887777654
No 432
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=28.65 E-value=44 Score=31.74 Aligned_cols=87 Identities=17% Similarity=0.184 Sum_probs=52.4
Q ss_pred CeEEEeCCCC-c-hHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEccccccccc
Q 012571 218 QSVLDVGCGF-G-SFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDK 295 (460)
Q Consensus 218 ~~VLDIGCGt-G-~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~ 295 (460)
.+|.=||+|. | .++..|++.| ..|+++|.+++.++.+.+.++.. . .+..++ -. .|+|+..- .-..
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G---~~V~~~dr~~~~~~~~~~~g~~~--~-~~~~~~---~~-aDvvi~~v---p~~~ 82 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWP---GGVTVYDIRIEAMTPLAEAGATL--A-DSVADV---AA-ADLIHITV---LDDA 82 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTST---TCEEEECSSTTTSHHHHHTTCEE--C-SSHHHH---TT-SSEEEECC---SSHH
T ss_pred CeEEEECcCHHHHHHHHHHHHCC---CeEEEEeCCHHHHHHHHHCCCEE--c-CCHHHH---Hh-CCEEEEEC---CChH
Confidence 4688888885 3 3556666666 46888899988777776665421 1 111111 12 68888652 1112
Q ss_pred cHHHHHHHHHHhcCCCcEEEEE
Q 012571 296 KEGIFLIEADRLLKPGGYFVLT 317 (460)
Q Consensus 296 d~~~~L~ei~RvLkPGG~lvl~ 317 (460)
....++.++...++||..++-.
T Consensus 83 ~~~~v~~~l~~~l~~g~ivv~~ 104 (296)
T 3qha_A 83 QVREVVGELAGHAKPGTVIAIH 104 (296)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEC
T ss_pred HHHHHHHHHHHhcCCCCEEEEe
Confidence 3345677888888887766544
No 433
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=27.90 E-value=5.1e+02 Score=30.35 Aligned_cols=43 Identities=16% Similarity=0.066 Sum_probs=34.6
Q ss_pred CeEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcC
Q 012571 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG 261 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rg 261 (460)
.+++|+=||.|.++..|...|.. ..+.++|+++...+.-+.+.
T Consensus 852 l~viDLFsG~GGlslGfe~AG~~-~vv~avEid~~A~~ty~~N~ 894 (1330)
T 3av4_A 852 LRTLDVFSGCGGLSEGFHQAGIS-ETLWAIEMWDPAAQAFRLNN 894 (1330)
T ss_dssp EEEEEETCTTSHHHHHHHHTTSE-EEEEEECCSHHHHHHHHHHC
T ss_pred ceEEecccCccHHHHHHHHCCCC-ceEEEEECCHHHHHHHHHhC
Confidence 58999999999999999888752 34678999998887665553
No 434
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=27.23 E-value=2.1e+02 Score=26.75 Aligned_cols=37 Identities=16% Similarity=0.234 Sum_probs=27.7
Q ss_pred CeEEEeCCCC-c-hHHHHHHhccCceeEEEEeeCCHHHHHHH
Q 012571 218 QSVLDVGCGF-G-SFGAHLVSLKLMAVCVAVYEATGSQVQLA 257 (460)
Q Consensus 218 ~~VLDIGCGt-G-~~a~~La~~g~~~~~v~giD~s~~~l~~A 257 (460)
.+|.=||+|. | .++..+++.| ..|+.+|.+++.++.+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G---~~V~~~d~~~~~~~~~ 54 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATG---HTVVLVDQTEDILAKS 54 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CeEEEEECCHHHHHHH
Confidence 5788899985 3 3666677666 4788999999887754
No 435
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=27.00 E-value=1.2e+02 Score=24.55 Aligned_cols=33 Identities=6% Similarity=0.089 Sum_probs=18.1
Q ss_pred HHHHHcCCCeEEEeecccCCCCCCCCccEEEEc
Q 012571 255 QLALERGLPAMIGNFISRQLPYPSLSFDMVHCA 287 (460)
Q Consensus 255 ~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~ 287 (460)
+.+.+.|+.+.+...+..+++-....+|+|+++
T Consensus 44 ~~~~~~gi~~~V~~~~~~~~~~~~~~~DlIist 76 (113)
T 1tvm_A 44 ELCQSHNIPVELIQCRVNEIETYMDGVHLICTT 76 (113)
T ss_dssp HHHHHTTCCEEEEEECTTTTTTSTTSCSEEEES
T ss_pred HHHHHcCCeEEEEEecHHHHhhccCCCCEEEEC
Confidence 344556666555544444443222457888875
No 436
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=26.26 E-value=99 Score=31.73 Aligned_cols=96 Identities=16% Similarity=0.114 Sum_probs=55.8
Q ss_pred CCeEEEeCCCC-ch-HHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeec--------ccCCCCCC------CC
Q 012571 217 VQSVLDVGCGF-GS-FGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFI--------SRQLPYPS------LS 280 (460)
Q Consensus 217 ~~~VLDIGCGt-G~-~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d--------~~~Lp~~~------~s 280 (460)
..+|.=||+|. |. ++..|++.| .+|+++|.+++.++..++.+.++.....+ ...+.+.+ ..
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G---~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~ 84 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIG---HDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAH 84 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHH
T ss_pred CceEEEECcCHHHHHHHHHHHhCC---CEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhc
Confidence 47888999884 43 566677766 57999999999888876654322100000 00111100 23
Q ss_pred ccEEEEccccccc----c---ccHHHHHHHHHHhcCCCcEEEE
Q 012571 281 FDMVHCAQCGIIW----D---KKEGIFLIEADRLLKPGGYFVL 316 (460)
Q Consensus 281 FDlVvs~~~l~~~----~---~d~~~~L~ei~RvLkPGG~lvl 316 (460)
.|+|+.+- -... . .....+++++...|+||..++.
T Consensus 85 aDvviiaV-ptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~ 126 (478)
T 2y0c_A 85 GDVQFIAV-GTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVD 126 (478)
T ss_dssp CSEEEECC-CCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEE
T ss_pred CCEEEEEe-CCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEE
Confidence 68887652 1110 0 2334577888889998776644
No 437
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=25.28 E-value=76 Score=30.85 Aligned_cols=43 Identities=16% Similarity=0.182 Sum_probs=29.9
Q ss_pred CCccEEEEcc----cccccc--ccHH----HHHHHHHHhcCCCcEEEEEeCCC
Q 012571 279 LSFDMVHCAQ----CGIIWD--KKEG----IFLIEADRLLKPGGYFVLTSPES 321 (460)
Q Consensus 279 ~sFDlVvs~~----~l~~~~--~d~~----~~L~ei~RvLkPGG~lvl~~~~~ 321 (460)
+.+|+|++.. ..+|+. .|.. .++.-..++|+|||.|+.-....
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvygg 257 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGY 257 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCC
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecC
Confidence 6799999953 223322 2222 25677889999999999998855
No 438
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=25.03 E-value=2.3e+02 Score=26.16 Aligned_cols=89 Identities=20% Similarity=0.181 Sum_probs=52.5
Q ss_pred CeEEEeCCCC--chHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEccccccccc
Q 012571 218 QSVLDVGCGF--GSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDK 295 (460)
Q Consensus 218 ~~VLDIGCGt--G~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~ 295 (460)
.+|.=||+|. +.++..|.+.+. ...|+++|.+++..+.+.+.+...... .++.-.-...|+|+..- -. .
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~-~~~V~~~d~~~~~~~~~~~~g~~~~~~----~~~~~~~~~aDvVilav--p~--~ 77 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHP-HYKIVGYNRSDRSRDIALERGIVDEAT----ADFKVFAALADVIILAV--PI--K 77 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCT-TSEEEEECSSHHHHHHHHHTTSCSEEE----SCTTTTGGGCSEEEECS--CH--H
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCC-CcEEEEEcCCHHHHHHHHHcCCccccc----CCHHHhhcCCCEEEEcC--CH--H
Confidence 5688888775 234555555532 257889999998888776665431111 11111113579988752 11 1
Q ss_pred cHHHHHHHHHHh-cCCCcEEE
Q 012571 296 KEGIFLIEADRL-LKPGGYFV 315 (460)
Q Consensus 296 d~~~~L~ei~Rv-LkPGG~lv 315 (460)
....++.++... |++|..++
T Consensus 78 ~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 78 KTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp HHHHHHHHHHTSCCCTTCEEE
T ss_pred HHHHHHHHHHhcCCCCCCEEE
Confidence 224578888888 88876554
No 439
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=24.67 E-value=1.4e+02 Score=28.51 Aligned_cols=93 Identities=13% Similarity=0.177 Sum_probs=52.7
Q ss_pred CeEEEeCCCC-c-hHHHHHHhccCceeEEEEeeCCHHHHHHHHHc-CCCeEE------Eee--cccCCCCCCCCccEEEE
Q 012571 218 QSVLDVGCGF-G-SFGAHLVSLKLMAVCVAVYEATGSQVQLALER-GLPAMI------GNF--ISRQLPYPSLSFDMVHC 286 (460)
Q Consensus 218 ~~VLDIGCGt-G-~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r-gl~~~~------~~~--d~~~Lp~~~~sFDlVvs 286 (460)
.+|.=||+|. | .++..|++.| ..|+.+|.+++.++..++. ++.+.- ... ...++.-.-..+|+|+.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~ 81 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKG---QSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILI 81 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCC---CEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEE
Confidence 5788889875 3 3445555555 4688899998888776665 321100 000 00111000135899887
Q ss_pred ccccccccccHHHHHHHHHHhcCCCcEEEEE
Q 012571 287 AQCGIIWDKKEGIFLIEADRLLKPGGYFVLT 317 (460)
Q Consensus 287 ~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~ 317 (460)
.- -. .....+++++...+++|..++..
T Consensus 82 ~v--~~--~~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 82 VV--PA--IHHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp CS--CG--GGHHHHHHHHGGGCCTTCEEEES
T ss_pred eC--Cc--hHHHHHHHHHHHhCCCCCEEEEc
Confidence 62 11 12345788888889987755444
No 440
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=24.35 E-value=68 Score=29.99 Aligned_cols=87 Identities=13% Similarity=0.099 Sum_probs=50.3
Q ss_pred CeEEEeCCCC-ch-HHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEccccccccc
Q 012571 218 QSVLDVGCGF-GS-FGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDK 295 (460)
Q Consensus 218 ~~VLDIGCGt-G~-~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~ 295 (460)
.+|.=||+|. |. ++..|.+.+ .+|..+|.+++..+...+.++.. . .+..+. . ...|+|+..- .-..
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~~~~~~~~~~~~~g~~~--~-~~~~~~-~--~~~D~vi~~v---~~~~ 73 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAG---YSLVVSDRNPEAIADVIAAGAET--A-STAKAI-A--EQCDVIITML---PNSP 73 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT---CEEEEECSCHHHHHHHHHTTCEE--C-SSHHHH-H--HHCSEEEECC---SSHH
T ss_pred ceEEEECchHHHHHHHHHHHhCC---CEEEEEeCCHHHHHHHHHCCCee--c-CCHHHH-H--hCCCEEEEEC---CCHH
Confidence 3688899885 33 455555555 46888999998888776665421 1 011110 0 2368888752 1111
Q ss_pred cHHHHH---HHHHHhcCCCcEEEE
Q 012571 296 KEGIFL---IEADRLLKPGGYFVL 316 (460)
Q Consensus 296 d~~~~L---~ei~RvLkPGG~lvl 316 (460)
+...++ .++...++||..++.
T Consensus 74 ~~~~~~~~~~~l~~~l~~~~~vv~ 97 (299)
T 1vpd_A 74 HVKEVALGENGIIEGAKPGTVLID 97 (299)
T ss_dssp HHHHHHHSTTCHHHHCCTTCEEEE
T ss_pred HHHHHHhCcchHhhcCCCCCEEEE
Confidence 223355 566778888876543
No 441
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=23.91 E-value=2e+02 Score=27.26 Aligned_cols=94 Identities=18% Similarity=0.140 Sum_probs=52.7
Q ss_pred CeEEEeCCCC--chHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEE---Ee-----ecc-cCCCCCCCCccEEEE
Q 012571 218 QSVLDVGCGF--GSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMI---GN-----FIS-RQLPYPSLSFDMVHC 286 (460)
Q Consensus 218 ~~VLDIGCGt--G~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~---~~-----~d~-~~Lp~~~~sFDlVvs 286 (460)
.+|+=||+|. +.++..|++.| .+|+.++-++ .+..++.|+...- .. ... .+..-....+|+|+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g---~~V~~~~r~~--~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVil 77 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTG---HCVSVVSRSD--YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLL 77 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTT---CEEEEECSTT--HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCC---CeEEEEeCCh--HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEE
Confidence 4678888884 34556666665 4677777766 2555555543221 00 000 011111236899987
Q ss_pred ccccccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012571 287 AQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (460)
Q Consensus 287 ~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~~ 320 (460)
.-=... ...+++++...++++..++.....
T Consensus 78 avK~~~----~~~~l~~l~~~l~~~t~Iv~~~nG 107 (320)
T 3i83_A 78 CIKVVE----GADRVGLLRDAVAPDTGIVLISNG 107 (320)
T ss_dssp CCCCCT----TCCHHHHHTTSCCTTCEEEEECSS
T ss_pred ecCCCC----hHHHHHHHHhhcCCCCEEEEeCCC
Confidence 621112 224788899999998877766543
No 442
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=23.70 E-value=1.4e+02 Score=28.82 Aligned_cols=90 Identities=17% Similarity=0.086 Sum_probs=53.7
Q ss_pred CeEEEeCCCC--chHHHHHHhccCceeEEEEeeCCHHHHHHHHHc-----------CCC------------eEEEeeccc
Q 012571 218 QSVLDVGCGF--GSFGAHLVSLKLMAVCVAVYEATGSQVQLALER-----------GLP------------AMIGNFISR 272 (460)
Q Consensus 218 ~~VLDIGCGt--G~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r-----------gl~------------~~~~~~d~~ 272 (460)
.+|-=||+|+ +.++..+++.| ..|+.+|.+++.++.++++ |.. +.+. .+..
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G---~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~-~~~~ 82 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGG---FRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLA 82 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe-CCHH
Confidence 5788888885 34667777776 4788999999988876542 310 1111 0111
Q ss_pred CCCCCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEE
Q 012571 273 QLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVL 316 (460)
Q Consensus 273 ~Lp~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl 316 (460)
+ .-...|+|+.+- -... +-...++.++...++||..++-
T Consensus 83 e---av~~aDlVieav-pe~~-~~k~~v~~~l~~~~~~~~Ii~s 121 (319)
T 2dpo_A 83 E---AVEGVVHIQECV-PENL-DLKRKIFAQLDSIVDDRVVLSS 121 (319)
T ss_dssp H---HTTTEEEEEECC-CSCH-HHHHHHHHHHHTTCCSSSEEEE
T ss_pred H---HHhcCCEEEEec-cCCH-HHHHHHHHHHHhhCCCCeEEEE
Confidence 0 013478888652 1111 1123578899999998886653
No 443
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=23.14 E-value=2.8e+02 Score=21.84 Aligned_cols=90 Identities=10% Similarity=0.020 Sum_probs=48.4
Q ss_pred CeEEEeCCCCchHHHHH----HhccCceeEEEEeeCCHHHHHHHHHc-CCCeEEEeec-ccCCC-CCCCCccEEEEcccc
Q 012571 218 QSVLDVGCGFGSFGAHL----VSLKLMAVCVAVYEATGSQVQLALER-GLPAMIGNFI-SRQLP-YPSLSFDMVHCAQCG 290 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~L----a~~g~~~~~v~giD~s~~~l~~A~~r-gl~~~~~~~d-~~~Lp-~~~~sFDlVvs~~~l 290 (460)
.+|+=+|+| ..+..+ .+.+ ..++.+|.+++.++...+. +......+.. ...+. ..-..+|+|+..-.
T Consensus 5 m~i~IiG~G--~iG~~~a~~L~~~g---~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~- 78 (140)
T 1lss_A 5 MYIIIAGIG--RVGYTLAKSLSEKG---HDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTG- 78 (140)
T ss_dssp CEEEEECCS--HHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCS-
T ss_pred CEEEEECCC--HHHHHHHHHHHhCC---CeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeC-
Confidence 578888874 444443 4444 5788899998877766543 4433222211 00010 11245899887621
Q ss_pred ccccccHHHHHHHHHHhcCCCcEEEEE
Q 012571 291 IIWDKKEGIFLIEADRLLKPGGYFVLT 317 (460)
Q Consensus 291 ~~~~~d~~~~L~ei~RvLkPGG~lvl~ 317 (460)
. +.....+.++.+.+.++ .++..
T Consensus 79 --~-~~~~~~~~~~~~~~~~~-~ii~~ 101 (140)
T 1lss_A 79 --K-EEVNLMSSLLAKSYGIN-KTIAR 101 (140)
T ss_dssp --C-HHHHHHHHHHHHHTTCC-CEEEE
T ss_pred --C-chHHHHHHHHHHHcCCC-EEEEE
Confidence 1 12223455667778876 44443
No 444
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=23.13 E-value=1.1e+02 Score=28.93 Aligned_cols=93 Identities=16% Similarity=0.082 Sum_probs=51.8
Q ss_pred CeEEEeCCCC-c-hHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeeccc--CCC-----CCCCCccEEEEcc
Q 012571 218 QSVLDVGCGF-G-SFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISR--QLP-----YPSLSFDMVHCAQ 288 (460)
Q Consensus 218 ~~VLDIGCGt-G-~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~--~Lp-----~~~~sFDlVvs~~ 288 (460)
.+|+=||+|. | .++..|++.| ..|+.++-++ .+..++.|+.......+.. .+. -.-..+|+|+..-
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g---~~V~~~~r~~--~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~D~vilav 77 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSG---EDVHFLLRRD--YEAIAGNGLKVFSINGDFTLPHVKGYRAPEEIGPMDLVLVGL 77 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTS---CCEEEECSTT--HHHHHHTCEEEEETTCCEEESCCCEESCHHHHCCCSEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHHCC---CeEEEEEcCc--HHHHHhCCCEEEcCCCeEEEeeceeecCHHHcCCCCEEEEec
Confidence 3577888885 3 3566666666 3567777765 3555566654332101000 000 0113689998752
Q ss_pred ccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 289 CGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 289 ~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
-.. +...+++++...++|+..++....
T Consensus 78 --k~~--~~~~~l~~l~~~l~~~~~iv~l~n 104 (312)
T 3hn2_A 78 --KTF--ANSRYEELIRPLVEEGTQILTLQN 104 (312)
T ss_dssp --CGG--GGGGHHHHHGGGCCTTCEEEECCS
T ss_pred --CCC--CcHHHHHHHHhhcCCCCEEEEecC
Confidence 111 223588899999998876655443
No 445
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=22.64 E-value=25 Score=35.42 Aligned_cols=96 Identities=13% Similarity=0.079 Sum_probs=53.6
Q ss_pred CCeEEEeCCCC-chHHHHHHhc-cCceeEEEEeeCCHHHHHHHHHcCCCeEEEeeccc----------------------
Q 012571 217 VQSVLDVGCGF-GSFGAHLVSL-KLMAVCVAVYEATGSQVQLALERGLPAMIGNFISR---------------------- 272 (460)
Q Consensus 217 ~~~VLDIGCGt-G~~a~~La~~-g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~---------------------- 272 (460)
..+|+=+|+|. |..+..++.. | ..|+.+|.++.-.+.+.+.|... ...+..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~G---a~V~v~D~~~~~~~~~~~lGa~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 246 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLG---AIVRAFDTRPEVKEQVQSMGAEF--LELDFKEEAGSGDGYAKVMSDAFIKAEM 246 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEECSCGGGHHHHHHTTCEE--CCC--------CCHHHHHHSHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEEcCCHHHHHHHHHcCCEE--EEecccccccccccchhhccHHHHHHHH
Confidence 47899999875 4444444443 4 57899999988777776555332 111100
Q ss_pred -CCCCCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012571 273 -QLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTS 318 (460)
Q Consensus 273 -~Lp~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~ 318 (460)
.+.-.-...|+|+..- +..-...+..+-+++.+.+||||.++-..
T Consensus 247 ~~l~e~~~~aDvVI~~~-~~pg~~ap~li~~~~l~~mk~g~vIVdva 292 (401)
T 1x13_A 247 ELFAAQAKEVDIIVTTA-LIPGKPAPKLITREMVDSMKAGSVIVDLA 292 (401)
T ss_dssp HHHHHHHHHCSEEEECC-CCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred HHHHHHhCCCCEEEECC-ccCCCCCCeeeCHHHHhcCCCCcEEEEEc
Confidence 0100002479998762 22111111112256778899999988655
No 446
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=22.48 E-value=1.3e+02 Score=28.73 Aligned_cols=89 Identities=17% Similarity=0.164 Sum_probs=51.7
Q ss_pred CeEEEeCCCC-ch-HHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEccccccccc
Q 012571 218 QSVLDVGCGF-GS-FGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDK 295 (460)
Q Consensus 218 ~~VLDIGCGt-G~-~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~~~ 295 (460)
.+|.=||+|. |. ++..|++.| ..|+++|.+++.++...+.++.. . .+..+. -...|+|+..- .-..
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G---~~V~~~dr~~~~~~~l~~~g~~~--~-~~~~e~---~~~aDvVi~~v---p~~~ 99 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAG---YALQVWNRTPARAASLAALGATI--H-EQARAA---ARDADIVVSML---ENGA 99 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTT---CEEEEECSCHHHHHHHHTTTCEE--E-SSHHHH---HTTCSEEEECC---SSHH
T ss_pred CEEEEECccHHHHHHHHHHHhCC---CeEEEEcCCHHHHHHHHHCCCEe--e-CCHHHH---HhcCCEEEEEC---CCHH
Confidence 5788899885 33 556666666 47889999999888776665421 1 011111 12358887652 1111
Q ss_pred cHHHHHH--HHHHhcCCCcEEEEEe
Q 012571 296 KEGIFLI--EADRLLKPGGYFVLTS 318 (460)
Q Consensus 296 d~~~~L~--ei~RvLkPGG~lvl~~ 318 (460)
....++. ++...+++|..++-..
T Consensus 100 ~~~~v~~~~~~~~~l~~~~~vi~~s 124 (320)
T 4dll_A 100 VVQDVLFAQGVAAAMKPGSLFLDMA 124 (320)
T ss_dssp HHHHHHTTTCHHHHCCTTCEEEECS
T ss_pred HHHHHHcchhHHhhCCCCCEEEecC
Confidence 2233444 5666777776655443
No 447
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=22.19 E-value=2e+02 Score=28.76 Aligned_cols=92 Identities=13% Similarity=0.136 Sum_probs=51.4
Q ss_pred eEEEeCCCC-ch-HHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeE----------------EEeecccCCCCCCCC
Q 012571 219 SVLDVGCGF-GS-FGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAM----------------IGNFISRQLPYPSLS 280 (460)
Q Consensus 219 ~VLDIGCGt-G~-~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~----------------~~~~d~~~Lp~~~~s 280 (460)
+|.=||+|. |. ++..|++.| .+|+++|.+++.++..++.+.++. +.. ..++.-.-..
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G---~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~--t~~~~~~~~~ 76 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARG---HEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSG--TTDFKKAVLD 76 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTT---CEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE--ESCHHHHHHT
T ss_pred EEEEECCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEE--eCCHHHHhcc
Confidence 456678875 33 556666666 478999999998887765433221 000 0000000124
Q ss_pred ccEEEEcccccccc----cc---HHHHHHHHHHhcCC---CcEEEE
Q 012571 281 FDMVHCAQCGIIWD----KK---EGIFLIEADRLLKP---GGYFVL 316 (460)
Q Consensus 281 FDlVvs~~~l~~~~----~d---~~~~L~ei~RvLkP---GG~lvl 316 (460)
.|+|+.+- -.... .| ...+++++...|++ |..++.
T Consensus 77 aDvviiaV-ptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~ 121 (436)
T 1mv8_A 77 SDVSFICV-GTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVV 121 (436)
T ss_dssp CSEEEECC-CCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEE
T ss_pred CCEEEEEc-CCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEE
Confidence 68888752 11110 11 55678888889998 555443
No 448
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=21.96 E-value=1.9e+02 Score=31.58 Aligned_cols=94 Identities=20% Similarity=0.192 Sum_probs=57.9
Q ss_pred CCCeEEEeCCCCc--hHHHHHHhccCceeEEEEeeCCHHHHHHHHHc---------------CCC----eEEEeecccCC
Q 012571 216 GVQSVLDVGCGFG--SFGAHLVSLKLMAVCVAVYEATGSQVQLALER---------------GLP----AMIGNFISRQL 274 (460)
Q Consensus 216 ~~~~VLDIGCGtG--~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r---------------gl~----~~~~~~d~~~L 274 (460)
.+.+|-=||+|+- .++..++..| ..|+.+|++++.++.++++ ... ......+...+
T Consensus 315 ~i~~v~ViGaG~MG~gIA~~~a~aG---~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 391 (742)
T 3zwc_A 315 PVSSVGVLGLGTMGRGIAISFARVG---ISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKEL 391 (742)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTT---CEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGGGG
T ss_pred cccEEEEEcccHHHHHHHHHHHhCC---CchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHHHH
Confidence 4578999999974 3566666666 5788999999988766442 000 00111111111
Q ss_pred CCCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012571 275 PYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTS 318 (460)
Q Consensus 275 p~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl~~ 318 (460)
...|+|+=. +.... +-...+++++..+++|+..|.-.+
T Consensus 392 ----~~aDlVIEA-V~E~l-~iK~~vf~~le~~~~~~aIlASNT 429 (742)
T 3zwc_A 392 ----STVDLVVEA-VFEDM-NLKKKVFAELSALCKPGAFLCTNT 429 (742)
T ss_dssp ----GSCSEEEEC-CCSCH-HHHHHHHHHHHHHSCTTCEEEECC
T ss_pred ----hhCCEEEEe-ccccH-HHHHHHHHHHhhcCCCCceEEecC
Confidence 246887754 22222 233469999999999998877543
No 449
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=21.76 E-value=2.1e+02 Score=26.43 Aligned_cols=68 Identities=9% Similarity=-0.051 Sum_probs=46.1
Q ss_pred CeEEEeCCCCch---HHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCC----------CCCCCccEE
Q 012571 218 QSVLDVGCGFGS---FGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP----------YPSLSFDMV 284 (460)
Q Consensus 218 ~~VLDIGCGtG~---~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp----------~~~~sFDlV 284 (460)
++||=.|++.|. .+..|+++| .+|+..|.+++..+...+.+..+.....|..+.. -.-+..|++
T Consensus 3 K~vlVTGas~GIG~aia~~la~~G---a~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiL 79 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAG---DKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVL 79 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEecCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 578888888773 667777777 5788889999887776666666666655543321 001568988
Q ss_pred EEcc
Q 012571 285 HCAQ 288 (460)
Q Consensus 285 vs~~ 288 (460)
+.+-
T Consensus 80 VNNA 83 (247)
T 3ged_A 80 VNNA 83 (247)
T ss_dssp EECC
T ss_pred EECC
Confidence 8764
No 450
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=21.54 E-value=32 Score=33.89 Aligned_cols=99 Identities=11% Similarity=0.016 Sum_probs=53.2
Q ss_pred CCeEEEeCCCC-chHHHHHHhc-cCceeEEEEeeCCHHHHHHHHHcCC-CeEEEeecccCCCCCCCCccEEEEccccccc
Q 012571 217 VQSVLDVGCGF-GSFGAHLVSL-KLMAVCVAVYEATGSQVQLALERGL-PAMIGNFISRQLPYPSLSFDMVHCAQCGIIW 293 (460)
Q Consensus 217 ~~~VLDIGCGt-G~~a~~La~~-g~~~~~v~giD~s~~~l~~A~~rgl-~~~~~~~d~~~Lp~~~~sFDlVvs~~~l~~~ 293 (460)
..+||=+|+|. |..+..++.. | .+|+.+|.+++..+.+.+.+. .+.....+...+.-.-..+|+|+..-. ...
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~G---a~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~-~~~ 242 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLG---AQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVL-VPG 242 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCC-CTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCC-cCC
Confidence 37899999863 3333344433 4 478899999988877765432 221111111111000125899987532 211
Q ss_pred cccHHHHHHHHHHhcCCCcEEEEEeC
Q 012571 294 DKKEGIFLIEADRLLKPGGYFVLTSP 319 (460)
Q Consensus 294 ~~d~~~~L~ei~RvLkPGG~lvl~~~ 319 (460)
...+..+.++..+.++|||.++....
T Consensus 243 ~~~~~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 243 RRAPILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp SSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred CCCCeecCHHHHhhCCCCCEEEEEec
Confidence 11111124556778999998876543
No 451
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=21.14 E-value=2.5e+02 Score=28.80 Aligned_cols=89 Identities=15% Similarity=0.122 Sum_probs=53.4
Q ss_pred CeEEEeCCCC--chHHHHHHhccCceeEEEEeeCCHHHHHHHHHc-----------CC-----------CeEEEeecccC
Q 012571 218 QSVLDVGCGF--GSFGAHLVSLKLMAVCVAVYEATGSQVQLALER-----------GL-----------PAMIGNFISRQ 273 (460)
Q Consensus 218 ~~VLDIGCGt--G~~a~~La~~g~~~~~v~giD~s~~~l~~A~~r-----------gl-----------~~~~~~~d~~~ 273 (460)
.+|-=||+|. +.++..+++.| ..|+.+|.+++.++.++++ +. .+... .+.+.
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG---~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~-~~~~~ 81 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHG---HQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPV-TDIHA 81 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT---CCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEE-CCGGG
T ss_pred CEEEEECcCHHHHHHHHHHHHCC---CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEe-CCHHH
Confidence 4566788875 34566666666 4688899999998877542 21 01111 11111
Q ss_pred CCCCCCCccEEEEccccccccccHHHHHHHHHHhcCCCcEEEE
Q 012571 274 LPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVL 316 (460)
Q Consensus 274 Lp~~~~sFDlVvs~~~l~~~~~d~~~~L~ei~RvLkPGG~lvl 316 (460)
-..-|+|+..- .... +-...++.++...++||..++.
T Consensus 82 ----~~~aDlVIeAV-pe~~-~vk~~v~~~l~~~~~~~~Ilas 118 (483)
T 3mog_A 82 ----LAAADLVIEAA-SERL-EVKKALFAQLAEVCPPQTLLTT 118 (483)
T ss_dssp ----GGGCSEEEECC-CCCH-HHHHHHHHHHHHHSCTTCEEEE
T ss_pred ----hcCCCEEEEcC-CCcH-HHHHHHHHHHHHhhccCcEEEe
Confidence 13468888752 1111 1124688999999999887654
No 452
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=20.51 E-value=47 Score=26.81 Aligned_cols=53 Identities=19% Similarity=0.110 Sum_probs=33.9
Q ss_pred eEEEeCCCCchHHHHHHhccCceeEEEEeeCCHHHHHHHHHcCCCeEEEeecccCCCCCCCCccEEEEc
Q 012571 219 SVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCA 287 (460)
Q Consensus 219 ~VLDIGCGtG~~a~~La~~g~~~~~v~giD~s~~~l~~A~~rgl~~~~~~~d~~~Lp~~~~sFDlVvs~ 287 (460)
+|| +-||.|.-+..+++ .+-+.++++|+++.+...+..+..-....+|+|+..
T Consensus 5 kIl-l~Cg~G~sTS~l~~---------------k~~~~~~~~gi~~~i~a~~~~~~~~~~~~~Dvil~~ 57 (106)
T 1e2b_A 5 HIY-LFSSAGMSTSLLVS---------------KMRAQAEKYEVPVIIEAFPETLAGEKGQNADVVLLG 57 (106)
T ss_dssp EEE-EECSSSTTTHHHHH---------------HHHHHHHHSCCSEEEEEECSSSTTHHHHHCSEEEEC
T ss_pred EEE-EECCCchhHHHHHH---------------HHHHHHHHCCCCeEEEEecHHHHHhhccCCCEEEEc
Confidence 455 56888876665543 345577788988887766555544212468988876
No 453
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=20.05 E-value=2.6e+02 Score=24.56 Aligned_cols=68 Identities=22% Similarity=0.127 Sum_probs=38.9
Q ss_pred CeEEEeCCCCchHHHHH----HhccCceeEEEEeeCCHHHHHHHHHcCC-CeEEEeecccCCCCCCCCccEEEEcccc
Q 012571 218 QSVLDVGCGFGSFGAHL----VSLKLMAVCVAVYEATGSQVQLALERGL-PAMIGNFISRQLPYPSLSFDMVHCAQCG 290 (460)
Q Consensus 218 ~~VLDIGCGtG~~a~~L----a~~g~~~~~v~giD~s~~~l~~A~~rgl-~~~~~~~d~~~Lp~~~~sFDlVvs~~~l 290 (460)
++||=.|+ +|..+..+ +++| .+|++++-++...+...+.++ .+...++. ..+.-.-+..|+|+.+-..
T Consensus 22 ~~ilVtGa-tG~iG~~l~~~L~~~G---~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~D~vi~~ag~ 94 (236)
T 3e8x_A 22 MRVLVVGA-NGKVARYLLSELKNKG---HEPVAMVRNEEQGPELRERGASDIVVANLE-EDFSHAFASIDAVVFAAGS 94 (236)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTT---CEEEEEESSGGGHHHHHHTTCSEEEECCTT-SCCGGGGTTCSEEEECCCC
T ss_pred CeEEEECC-CChHHHHHHHHHHhCC---CeEEEEECChHHHHHHHhCCCceEEEcccH-HHHHHHHcCCCEEEECCCC
Confidence 67888874 45555444 4445 578888887766655544454 43333332 2222112368999876543
Done!